BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001618
         (1043 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359484435|ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera]
 gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera]
          Length = 1091

 Score = 1707 bits (4421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 848/1048 (80%), Positives = 946/1048 (90%), Gaps = 8/1048 (0%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK++QFRQILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQRE
Sbjct: 46   IAREYFKQGKIDQFRQILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQRE 105

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KEEHFILATQYYNKASRIDMHE STWVGKGQLLLAKG+VEQA +AFKIVL+ DRDNVPAL
Sbjct: 106  KEEHFILATQYYNKASRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPAL 165

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LGQACVEFNRGRYSDSL+ YKRALQV+P CP A+R+GIGLC YKLGQ  KAR+AFQR LQ
Sbjct: 166  LGQACVEFNRGRYSDSLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQ 225

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            LDPENVEALVAL +MDL  N+A+GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF
Sbjct: 226  LDPENVEALVALGIMDLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE NKPH+F+ PY
Sbjct: 286  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPY 345

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            YGLGQVQLKLGDFRS+L+NFEKVLE+YP+NCE LKALGHIYVQLGQ EKAQE LRKA KI
Sbjct: 346  YGLGQVQLKLGDFRSSLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKI 405

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
            DPRDAQAF+DLGELLI+SDTGAALDAFKTAR LLKK GEEVPIE+LNNIGV++FE+GEFE
Sbjct: 406  DPRDAQAFLDLGELLITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFE 465

Query: 421  SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
             A Q+FK+A+GDGIWL+ +D K  +Y  DA  SM  FKDMQLFH+ E DG+ VELPWNKV
Sbjct: 466  LAEQTFKEAVGDGIWLSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKV 525

Query: 481  TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
            TVLFNLARLLEQ+++T  AS+LYRLILFK+ DY+DAYLRLAAIAKARNN+QLSIELV +A
Sbjct: 526  TVLFNLARLLEQLNNTKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDA 585

Query: 541  LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN 600
            LKVN K PN+L MLGDLELKNDDWVKAKETFR+ASDATDGKDSYATLSLGNWNYFAA+R+
Sbjct: 586  LKVNDKGPNSLCMLGDLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRS 645

Query: 601  EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
            EKRAPKLEATHLEKAKELYTRV+VQH +NLYAANGAGVVLAEKG FDVSKD+FTQVQEAA
Sbjct: 646  EKRAPKLEATHLEKAKELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAA 705

Query: 661  SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 720
            SGSVFVQMPDVWINLAHVYFAQGNFALA+KMYQNCLRKFYYNTD+Q+LLYLARTHYEAEQ
Sbjct: 706  SGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQ 765

Query: 721  WQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRV 780
            WQDCKK+LLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKT+RTADEVRSTVAEL+NAVR+
Sbjct: 766  WQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRI 825

Query: 781  FSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 840
            FS LSAASNLH HGFDEKKI THV YCKHLL+AAK+H EAAEREE QNR R E ARQ  L
Sbjct: 826  FSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNL 885

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
            AEEARRKAEEQ+K+ LE+RK EDE KR+ QQE+HF+RVKEQW+S+   SKR+ERS+ DDD
Sbjct: 886  AEEARRKAEEQRKFQLERRKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRKERSQIDDD 945

Query: 901  EVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMND 960
            E G SE+RRRKGGKRRKKDK   S Y++E A AD MD ++E EDED +MN+RE   QMN+
Sbjct: 946  EGGQSERRRRKGGKRRKKDK---SRYDSEEARADAMDDQDEMEDEDTNMNHRESTNQMNN 1002

Query: 961  QDDDVEENANDRLAAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQ-----LRD 1015
            QDDD E++A D LAAAGLEDSD +D+MA   +  RR+RA SESD+DEP +++     +R+
Sbjct: 1003 QDDDGEDDAQDLLAAAGLEDSDAEDDMAGPSSGNRRKRAWSESDEDEPQDQRPESSPVRE 1062

Query: 1016 NTDELQDSDGELRENDHKSNGGAALDDD 1043
            N+ E+Q+SDGE+++++ K NG AA DD+
Sbjct: 1063 NSAEVQESDGEIKDDNDKPNGDAAEDDE 1090


>gi|356556372|ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score = 1691 bits (4379), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 836/1049 (79%), Positives = 939/1049 (89%), Gaps = 15/1049 (1%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK++Q+RQILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQRE
Sbjct: 46   IAREYFKQGKIDQYRQILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQRE 105

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS+AFKIVL+ D DNVPAL
Sbjct: 106  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPAL 165

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LGQACVEFNRGR+SDSLE YKR LQV+P+CP A+RLGIGLCRYKLGQ  KA+QAF+R LQ
Sbjct: 166  LGQACVEFNRGRFSDSLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQ 225

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            LDPENVE+L+ALA+MDL+ NEA GIR GM KMQRAFEIYPYCAMALNYLANHFFFTGQHF
Sbjct: 226  LDPENVESLIALAIMDLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE+NKPHEF+FPY
Sbjct: 286  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPY 345

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            YGLGQVQ+KLGDF+SAL+NFEKVLE+YPDNCETLKALGHIYVQLGQ +K Q+ +RKA KI
Sbjct: 346  YGLGQVQIKLGDFKSALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKI 405

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
            DPRDAQAF++LGELLI SDTGAALDAFKTA TL KK G+EVPIE+LNNIGV+ FE+GEFE
Sbjct: 406  DPRDAQAFLELGELLILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFE 465

Query: 421  SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
             A Q+FK+ALGDG+WL+ ++ + K+  IDA+ S LQFKDMQLFH  E++G+HVE+PW+KV
Sbjct: 466  LARQTFKEALGDGVWLSFINEENKS-SIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKV 524

Query: 481  TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
            TVLFNLARLLEQ++D+  AS+ YRLILFKY DY+DAYLRLAAIAKARNN+ LSIELVN+A
Sbjct: 525  TVLFNLARLLEQLYDSGTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDA 584

Query: 541  LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN 600
            LKVN K PNALSMLG+LELKNDDWVKAKET R ASDATDGKDSYATLSLGNWNYFAA+RN
Sbjct: 585  LKVNNKCPNALSMLGELELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRN 644

Query: 601  EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
            EKR PKLEATHLEKAKEL TRV++QH+SNLYAANGA VVLAEKG FDVSKD+FTQVQEAA
Sbjct: 645  EKRNPKLEATHLEKAKELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAA 704

Query: 661  SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 720
            SGSVFVQMPDVWINLAHVYFAQGNF LA+KMYQNCLRKFY+NTD+QILLYLARTHYEAEQ
Sbjct: 705  SGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQ 764

Query: 721  WQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRV 780
            WQDC K+LLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK +RTADEVR+TVAEL+NAVRV
Sbjct: 765  WQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRV 824

Query: 781  FSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 840
            FS LSAASNLH+HGFDEKKI+THV YC HLL AAK+H EAAE EEQQ RQRQE ARQ AL
Sbjct: 825  FSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVAL 884

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
            AEEARRKAEEQ+K+ +E+RK EDE KR+++QEEHF+RVKEQW+SS+  SKRRERS  DD+
Sbjct: 885  AEEARRKAEEQRKFQMERRKQEDELKRVQKQEEHFRRVKEQWKSSS-HSKRRERS--DDE 941

Query: 901  EVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYR-EPIGQMN 959
            E G  EK+R+KGGKRRKKDK S+  Y+ E  E D+MD  +  EDE+A +NYR EP  QMN
Sbjct: 942  EGGTGEKKRKKGGKRRKKDKHSKLRYDAEEPEDDLMD-EQGMEDEEADINYREEPQTQMN 1000

Query: 960  DQDDDVEENANDRLAAAGLEDSDVDDEM-APSITAARRRRALSESDDDEP-FERQ---LR 1014
               DD EENA   LAAAGLEDSD D+E  APS + ARRR+ALSESDDDEP  +RQ   +R
Sbjct: 1001 ---DDAEENAQGLLAAAGLEDSDADEETAAPSSSIARRRQALSESDDDEPLLQRQSSPVR 1057

Query: 1015 DNTDELQDSDGELRENDHKSNGGAALDDD 1043
             N+ ++Q SDGE+R+ D K+NG    D++
Sbjct: 1058 QNSADMQLSDGEIRDGD-KTNGDDGNDEE 1085


>gi|356530423|ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score = 1676 bits (4340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 837/1042 (80%), Positives = 939/1042 (90%), Gaps = 17/1042 (1%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK++QFRQILEEGSSPEID+YYADVRYERIAILNALG YY+YLGKIETKQRE
Sbjct: 46   IAREYFKQGKIDQFRQILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQRE 105

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS+AFKIVL+ DRDNVPAL
Sbjct: 106  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPAL 165

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LGQACVEFNRGRYSDSLE YKRAL V+P CP A+RLGIGLCRYKLGQ  KA+QAF+R   
Sbjct: 166  LGQACVEFNRGRYSDSLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER--- 222

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            LDPENVEALVALA+MDL+ NEA GIR GM KMQRAFEIYPYCAMALNYLANHFFFTGQHF
Sbjct: 223  LDPENVEALVALAIMDLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHF 282

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE+NKPHEF+FPY
Sbjct: 283  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPY 342

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            YGLGQVQ+KLGDF+SAL+NFEKVLE+YPDNCETLKALGHIYVQLGQ +K Q+ +RKA KI
Sbjct: 343  YGLGQVQIKLGDFKSALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKI 402

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
            DPRDAQAF++LGELLI SDTGAALDAFKTARTL KK G+EVPIE+LNNIGV+ FE+GEFE
Sbjct: 403  DPRDAQAFLELGELLILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFE 462

Query: 421  SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
             A Q+FK+ALGDG+WL+ ++ + K+  IDA+ S LQFKDM+LFH  E++G+HVE+PW+KV
Sbjct: 463  LAQQTFKEALGDGVWLSFINEEKKS-SIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKV 521

Query: 481  TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
            TVLFNLARLLEQ++D+  AS+LYRL+LFKY DY+DAYLRLAAIAKARNN+ LSIELVN+A
Sbjct: 522  TVLFNLARLLEQLNDSGTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDA 581

Query: 541  LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN 600
            LKVN K PNALSMLG+LELKNDDWVKAKET RAASDAT+GKDSYA+LSLGNWNYFAA+RN
Sbjct: 582  LKVNNKCPNALSMLGELELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRN 641

Query: 601  EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
            EKR PKLEATHLEKAKELYTRV++QH+SNLYAANGA VVLAEKG FDVSKD+FTQVQEAA
Sbjct: 642  EKRNPKLEATHLEKAKELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAA 701

Query: 661  SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 720
            SGSVFVQMPDVWINLAHVYFAQGNF LA+KMYQNCLRKFY+NTD+QILLYLARTHYEAEQ
Sbjct: 702  SGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQ 761

Query: 721  WQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRV 780
            WQDC K+LLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK +RTADEVR+TVAEL+NAVRV
Sbjct: 762  WQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRV 821

Query: 781  FSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 840
            FS LSAASNLH+HGFDEKKI+THV YC HLL AAK+H EAAEREEQQ RQRQE ARQ A 
Sbjct: 822  FSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAF 881

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
            AEEARRKAEEQ+K+ +E+RK EDE KR++QQEEHF+RVKEQW+SS+  SKRRERS +D++
Sbjct: 882  AEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFRRVKEQWKSSS-HSKRRERS-DDEE 939

Query: 901  EVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYR-EPIGQMN 959
              G  EK+R+KGGKRRKKDK S+S Y+TE  E + M   +E EDE+A +NYR EP  QMN
Sbjct: 940  GGGTGEKKRKKGGKRRKKDKHSKSRYDTEEPE-NDMMDEQEMEDEEADINYREEPQTQMN 998

Query: 960  DQDDDVEENANDRLAAAGLEDSDVDDEM-APSITAARRRRALSESDDDEPF-ERQ---LR 1014
               DD EENA   LAAAGLEDSD D+E  APS + ARRR+ALSESDDDEP  +RQ    R
Sbjct: 999  ---DDAEENAQGLLAAAGLEDSDADEEAPAPSSSIARRRQALSESDDDEPLIQRQSSPAR 1055

Query: 1015 DNTDELQDSDGELRENDHKSNG 1036
            +N+ ++Q SDGE+R+ D K+NG
Sbjct: 1056 ENSADMQLSDGEIRDGD-KTNG 1076


>gi|449452556|ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score = 1669 bits (4321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 826/1034 (79%), Positives = 918/1034 (88%), Gaps = 11/1034 (1%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQRE
Sbjct: 46   IAREYFKQGKLEQFRQILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQRE 105

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL KGEVEQA +AFKIVL+ DRDNVPAL
Sbjct: 106  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPAL 165

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LGQACVEFNRG YS+SLE YKRALQV+P CP A+RLGIGLCRY+L Q GKA+QAF+R   
Sbjct: 166  LGQACVEFNRGHYSESLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER--- 222

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            LDPENVEALV LA++DL  NEA  IR GMEKMQRAFEIYP+CAMALNYLANHFFFTGQHF
Sbjct: 223  LDPENVEALVGLAIIDLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHF 282

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            LVEQLTETALA+TNHGPTKSHS+YNLARSYHSKGDYEKAGLYYMAS KE NKP EF+FPY
Sbjct: 283  LVEQLTETALAITNHGPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPY 342

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            YGLGQVQLK+GD RSAL+NFEKVLE+YPDNCETLK LGHIYVQLGQ EKAQE LRKA KI
Sbjct: 343  YGLGQVQLKMGDLRSALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKI 402

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
            DPRDAQAF+DLGELLIS+D  AALDAFKTA  LLKK G+EVPIEVLNN+GV+HFE+ EFE
Sbjct: 403  DPRDAQAFLDLGELLISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFE 462

Query: 421  SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
             A + FK+ALGDGIWL  +D K +   I+ASAS+LQ+KD++LF++ E +G  + LPW KV
Sbjct: 463  LAERIFKEALGDGIWLDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKV 522

Query: 481  TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
            T LFNLARLLEQ+H    +SVLYRLILFKY DYVDAYLRLA+IAKARN +QLSIELVN+A
Sbjct: 523  TSLFNLARLLEQLHRIEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDA 582

Query: 541  LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN 600
            LKVN K  NALSMLG+LELKNDDWV+AKETFRAA +ATDGKDSYATLSLGNWNYFAALRN
Sbjct: 583  LKVNDKCSNALSMLGELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRN 642

Query: 601  EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
            EKR PKLEATHLEK+KELYTRV+VQH +NLYAANGAGV+LAEKGQFDVSKD+FTQVQEAA
Sbjct: 643  EKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAA 702

Query: 661  SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 720
            SG++FVQMPDVWINLAHVYFAQGNF+LA+KMYQNCLRKFYYNTD QILLYLART+YEAEQ
Sbjct: 703  SGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQ 762

Query: 721  WQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRV 780
            WQDCKK+LLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKT+RTADEVRSTVAELENAVRV
Sbjct: 763  WQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRV 822

Query: 781  FSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 840
            FS LSAASNLH HGFDEKKI+THV YCKHLL+AA +H +AAE EEQQ RQRQE ARQ AL
Sbjct: 823  FSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVAL 882

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
            AE+ARRKA+EQ+K+ LE+RKLEDE+KR+ QQE+HF+RVKEQW+S TPA KRRERSE DDD
Sbjct: 883  AEDARRKADEQRKFQLERRKLEDEEKRMMQQEQHFKRVKEQWKSITPA-KRRERSEIDDD 941

Query: 901  EVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMND 960
            E G+SEKRRRKGGKRRKKD+  +SHYETE A+ DMMD  +E  +ED +++YRE   Q+ND
Sbjct: 942  EAGNSEKRRRKGGKRRKKDRKGKSHYETEEADNDMMD-DQELYNEDNNISYRESRSQVND 1000

Query: 961  QDDDVEENANDRLAAAGLEDSDVDDEM-APSITAARRRRALSESDDDEPFERQL-----R 1014
            Q DD E N  D LA AGLEDSD +DE  APS  AARRR   S+S++DEP + Q      R
Sbjct: 1001 QGDDFEGNDQDALAEAGLEDSDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQR 1060

Query: 1015 DNTDELQDSDGELR 1028
            +N+  L+DSDGE+R
Sbjct: 1061 ENSAGLEDSDGEIR 1074


>gi|224068420|ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
 gi|222833309|gb|EEE71786.1| PAF1 complex component [Populus trichocarpa]
          Length = 1056

 Score = 1667 bits (4316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 836/1012 (82%), Positives = 918/1012 (90%), Gaps = 5/1012 (0%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK++QFRQILEEGSS EIDEYYADVRYERIAILNALG YY+YLGK+ETKQRE
Sbjct: 46   IAREYFKQGKLDQFRQILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQRE 105

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KEE+FI AT++YNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS+AF+IVLE DRDNV AL
Sbjct: 106  KEEYFIQATKHYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSAL 165

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LGQACVE++RG Y +SL  +KRALQV+P CPGA+RLGIG C YKLG +GKA  AFQR   
Sbjct: 166  LGQACVEYSRGHYGESLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR--- 222

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            LDPENVEALV+LA++DLQ NEAA IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF
Sbjct: 223  LDPENVEALVSLAILDLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 282

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE A  YY ASVKEINKP EF+FPY
Sbjct: 283  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPY 342

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            YGLGQVQLKLG+ ++AL+NFEKVLE+YPDNCETLK LGHIYVQLGQ EKAQE LRKAAKI
Sbjct: 343  YGLGQVQLKLGEIKNALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKI 402

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
            DPRDAQAF+DLGELLIS+DTGAALDAFKTAR+LLKK GEEVPIEVLNNI VIHFE+ E E
Sbjct: 403  DPRDAQAFLDLGELLISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELE 462

Query: 421  SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
             A Q+FK+ALGDGIWLT L+ K  TY +DA++S+LQ+KDMQ+F R E +G+ VEL WNKV
Sbjct: 463  LALQNFKEALGDGIWLTFLEGKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKV 522

Query: 481  TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
            T LFNLARLLEQ+H+T  AS LYRLILFKY DYVDAYLRLAAIAKARNNL LSIELVNEA
Sbjct: 523  TTLFNLARLLEQLHNTETASTLYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEA 582

Query: 541  LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN 600
            L VN K PNALSMLGDLELKNDDWVKAKETFRAAS+ATDGKDSYATLSLGNWNYFAA+RN
Sbjct: 583  LTVNDKCPNALSMLGDLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRN 642

Query: 601  EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
            EKR PKLEATHLEKAKELYTRV+VQHT+NLYAANGAGVVLAEKG FDVSKDLFTQVQEAA
Sbjct: 643  EKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAA 702

Query: 661  SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 720
            SGS+FVQMPDVWINLAHVYFAQGNFALA+KMYQNCL+KF+YNTD+QILLYLARTHYEAEQ
Sbjct: 703  SGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQ 762

Query: 721  WQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRV 780
            WQDCK++LLRAIHL PSNYTLRFDAGVAMQKFSASTLQKT+RT DEVRSTV ELENAVR+
Sbjct: 763  WQDCKRTLLRAIHLTPSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRL 822

Query: 781  FSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 840
            FS LSAASNL+ +GFDEKKINTHVEYCKHLL+AA +HREAAEREEQQNRQR + ARQ AL
Sbjct: 823  FSQLSAASNLYFNGFDEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMAL 882

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
            AEEARRKAEEQ+K+ LE+RK EDE KR+RQQEEHF+RVKEQW+SST ASKRR+R++ DD 
Sbjct: 883  AEEARRKAEEQRKFQLERRKQEDELKRVRQQEEHFERVKEQWKSSTSASKRRDRADIDDG 942

Query: 901  EVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMND 960
            E GH EKRRRKGGKRRKK+KSSRS YE E  EADMMD  +EPED+DA++N+REP  QMND
Sbjct: 943  EGGHGEKRRRKGGKRRKKEKSSRSRYEME--EADMMDDHDEPEDDDANVNFREPGYQMND 1000

Query: 961  QDDDVEENANDRLAAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQ 1012
            QDD+ EENA D LAAAGLEDSD DD+ A   +A RR+RA SESD+DE  ER+
Sbjct: 1001 QDDNAEENAQDVLAAAGLEDSDADDDAAAPSSAGRRKRAWSESDEDEISERK 1052


>gi|255550483|ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
 gi|223544778|gb|EEF46294.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score = 1639 bits (4244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 832/1048 (79%), Positives = 917/1048 (87%), Gaps = 34/1048 (3%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGSS +IDEYYADV+Y+RIAILNALG YY+YLGKIETKQRE
Sbjct: 46   IAREYFKQGKLEQFRQILEEGSSNDIDEYYADVKYDRIAILNALGAYYSYLGKIETKQRE 105

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KEE+FI AT+YYNKASRIDMHEPSTWVGKGQLLLAKGE+EQA +AFKIVLE DRDNV AL
Sbjct: 106  KEEYFIQATRYYNKASRIDMHEPSTWVGKGQLLLAKGEIEQAYNAFKIVLEGDRDNVSAL 165

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LGQACVE+NR  Y++SL+ YKRALQVHP CPG+                           
Sbjct: 166  LGQACVEYNRSHYNESLKSYKRALQVHPECPGS--------------------------- 198

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            LDPENVEALV+LA++DLQ NE  GIR+GME MQRAFEIYPYCAMALNYLANHFFFTGQHF
Sbjct: 199  LDPENVEALVSLAILDLQTNEVNGIRRGMESMQRAFEIYPYCAMALNYLANHFFFTGQHF 258

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            LVEQLTETALAVTNHGPTKSHS+YNLARSYHSKGDYE A  YY ASVKE NKP EF+FPY
Sbjct: 259  LVEQLTETALAVTNHGPTKSHSFYNLARSYHSKGDYETASRYYWASVKETNKPSEFVFPY 318

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            YGLGQVQLKLG+ ++AL+NFEKVLE+YPDNCETLK LGHIY QLGQ EKAQE LRKA KI
Sbjct: 319  YGLGQVQLKLGEIKNALSNFEKVLEVYPDNCETLKVLGHIYAQLGQTEKAQEYLRKATKI 378

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
            DPRDAQAF+DLGELLISSDTGAALDA KTAR+LLKK G EVP+EVLNNIGVI+FE+ E E
Sbjct: 379  DPRDAQAFLDLGELLISSDTGAALDALKTARSLLKKGGHEVPVEVLNNIGVIYFEREELE 438

Query: 421  SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
             A ++FK+A+GDGIWL  LD K KTY IDA+AS+L +KDMQ FH+ E DG+ VEL W+KV
Sbjct: 439  LALETFKEAVGDGIWLAFLDGKAKTYTIDAAASILHYKDMQFFHQLEQDGHRVELTWDKV 498

Query: 481  TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
            T LFNLARLLEQ+H+   A+VLY LILFKY DYVDAYLRLAAI+KARNNLQLSIELVNEA
Sbjct: 499  TALFNLARLLEQMHNIETANVLYVLILFKYPDYVDAYLRLAAISKARNNLQLSIELVNEA 558

Query: 541  LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN 600
            LKVN K PNALSMLGDLELKNDDWVKAKETFRAAS+ATDGKDSYA LSLGNWNYFAA+RN
Sbjct: 559  LKVNDKCPNALSMLGDLELKNDDWVKAKETFRAASEATDGKDSYAILSLGNWNYFAAIRN 618

Query: 601  EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
            EKR PKLEATHLEKAKELYTRV+VQHT+NLYAANGAGVVLAEKG FDVSKDLF +VQEAA
Sbjct: 619  EKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFMEVQEAA 678

Query: 661  SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 720
            SGS+FVQMPDVWINLAHVYFAQGNFALA+KMYQNCLRKFYY+TD+QILLYLARTHYEAEQ
Sbjct: 679  SGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYSTDSQILLYLARTHYEAEQ 738

Query: 721  WQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRV 780
            WQ+CKK+LLRAIHLAPSNY LRFDAGVAMQKFSASTLQKT+RT DEVRSTV ELENAVR+
Sbjct: 739  WQECKKTLLRAIHLAPSNYILRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRL 798

Query: 781  FSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 840
            FS LSA+SNLH HGFDEKKINTHVEYCKHLL+AAK+HREAAEREEQQNRQRQE ARQ AL
Sbjct: 799  FSQLSASSNLHFHGFDEKKINTHVEYCKHLLEAAKVHREAAEREEQQNRQRQEVARQMAL 858

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
            AEEARRKAEEQKK+LLEKRK EDE KR+RQQEEHF+RVKEQW++STP SKRR+RSE D++
Sbjct: 859  AEEARRKAEEQKKFLLEKRKQEDELKRVRQQEEHFERVKEQWKTSTPGSKRRDRSEVDEE 918

Query: 901  EVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMND 960
            E GHSEKRRRKGGKRRKK+KSS+S YE E  EADMMD REE EDEDA++NY E   ++++
Sbjct: 919  EGGHSEKRRRKGGKRRKKEKSSKSRYEIEEGEADMMDDREELEDEDANVNYGEHKNRLDN 978

Query: 961  QDDDVEENANDRLAAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQL-----RD 1015
            QD+D EENA D LAAAGLEDSD +D  APS T ARRRRALSESDDDE  + +L     R 
Sbjct: 979  QDEDAEENAQDLLAAAGLEDSDAED-AAPSST-ARRRRALSESDDDEVLDSKLQSSPVRG 1036

Query: 1016 NTDELQDSDGELRENDHKSNGGAALDDD 1043
            N+ ELQ+SDGE+RE   K  G AA DD+
Sbjct: 1037 NSAELQESDGEIREGADKQYGDAAFDDE 1064


>gi|449500473|ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score = 1618 bits (4190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 807/1034 (78%), Positives = 895/1034 (86%), Gaps = 35/1034 (3%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQRE
Sbjct: 46   IAREYFKQGKLEQFRQILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQRE 105

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL KGEVEQA +AFKIVL+ DRDNVPAL
Sbjct: 106  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPAL 165

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LGQACVEFNRG YS+SLE YKRALQV+P CP A                           
Sbjct: 166  LGQACVEFNRGHYSESLELYKRALQVYPDCPAA--------------------------- 198

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            LDPENVEALV LA++DL  NEA  IR GMEKMQRAFEIYP+CAMALNYLANHFFFTGQHF
Sbjct: 199  LDPENVEALVGLAIIDLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHF 258

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            LVEQLTETALA+TNHGPTKSHS+YNLARSYHSKGDYEKAGLYYMAS KE NKP EF+FPY
Sbjct: 259  LVEQLTETALAITNHGPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPY 318

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            YGLGQVQLK+GD RSAL+NFEKVLE+YPDNCETLK LGHIYVQLGQ EKAQE LRKA KI
Sbjct: 319  YGLGQVQLKMGDLRSALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKI 378

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
            DPRDAQAF+DLGELLIS+D  AALDAFKTA  LLKK G+EVPIEVLNN+GV+HFE+ EFE
Sbjct: 379  DPRDAQAFLDLGELLISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFE 438

Query: 421  SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
             A + FK+ALGDGIWL  +D K +   I+ASAS+LQ+KD++LF++ E +G  + LPW KV
Sbjct: 439  LAERIFKEALGDGIWLDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKV 498

Query: 481  TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
            T LFNLARLLEQ+H    +SVLYRLILFKY DYVDAYLRLA+IAKARN +QLSIELVN+A
Sbjct: 499  TSLFNLARLLEQLHRIEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDA 558

Query: 541  LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN 600
            LKVN K  NALSMLG+LE KNDDWV+AKETFRAA +ATDGKDSYATLSLGNWNYFAALRN
Sbjct: 559  LKVNDKCSNALSMLGELEXKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRN 618

Query: 601  EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
            EKR PKLEATHLEK+KELYTRV+VQH +NLYAANGAGV+LAEKGQFDVSKD+FTQVQEAA
Sbjct: 619  EKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAA 678

Query: 661  SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 720
            SG++FVQMPDVWINLAHVYFAQGNF+LA+KMYQNCLRKFYYNTD QILLYLART+YEAEQ
Sbjct: 679  SGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQ 738

Query: 721  WQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRV 780
            WQDCKK+LLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKT+RTADEVRSTVAELENAVRV
Sbjct: 739  WQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRV 798

Query: 781  FSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 840
            FS LSAASNLH HGFDEKKI+THV YCKHLL+AA +H +AAE EEQQ RQRQE ARQ AL
Sbjct: 799  FSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVAL 858

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
            AE+ARRKA+EQ+K+ LE+RKLEDE+KR+ QQE+HF+RVKEQW+S TPA KRRERSE DDD
Sbjct: 859  AEDARRKADEQRKFQLERRKLEDEEKRMMQQEQHFKRVKEQWKSITPA-KRRERSEIDDD 917

Query: 901  EVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMND 960
            E G+SEKRRRKGGKRRKKD+  +SHYETE A+ DMMD  +E  +ED +++YRE   Q+ND
Sbjct: 918  EAGNSEKRRRKGGKRRKKDRKGKSHYETEEADNDMMD-DQELYNEDNNISYRESRSQVND 976

Query: 961  QDDDVEENANDRLAAAGLEDSDVDDEM-APSITAARRRRALSESDDDEPFERQL-----R 1014
            Q DD E N  D LA AGLEDSD +DE  APS  AARRR   S+S++DEP + Q      R
Sbjct: 977  QGDDFEGNDQDALAEAGLEDSDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRLQR 1036

Query: 1015 DNTDELQDSDGELR 1028
            +N+  L+DSDGE+R
Sbjct: 1037 ENSAGLEDSDGEIR 1050


>gi|240254442|ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana]
 gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION INDEPENDENCE 6 [Arabidopsis thaliana]
 gi|330250911|gb|AEC06005.1| protein early flowering 8 [Arabidopsis thaliana]
          Length = 1091

 Score = 1552 bits (4019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 770/1033 (74%), Positives = 890/1033 (86%), Gaps = 10/1033 (0%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGSS +IDEYYADV+YERIAILNALG YY+YLGK ETK RE
Sbjct: 46   IAREYFKQGKIEQFRQILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKNRE 105

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KEE FI AT+YYNKASRIDMHEPSTWVGKGQLLLAKGE++ A  AFKIVL+   DNVPAL
Sbjct: 106  KEEQFISATRYYNKASRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPAL 165

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LGQA VEFNRGR+S+SL+ YKRALQV P CP A+RLGIGLCRYKLGQL KARQAF R LQ
Sbjct: 166  LGQASVEFNRGRFSESLQLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQ 225

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            LDP+NVEALVAL +MDLQAN++ G+RKGM++MQ+AFEIYPYCA ALNYLANHFFFTGQHF
Sbjct: 226  LDPDNVEALVALGIMDLQANDSIGMRKGMDRMQQAFEIYPYCASALNYLANHFFFTGQHF 285

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK-PHEFIFP 299
            LVEQLTETALAVT HGPTKSHS+YNLARSYHSKGD+EKAG+YYMA++KE N  PHEF+FP
Sbjct: 286  LVEQLTETALAVTTHGPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFP 345

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
            Y+GLGQVQLKLG+ + ++ NFEKVLE+YPDNCETLKALGH+Y QLGQ EKA E +RKA K
Sbjct: 346  YFGLGQVQLKLGELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKATK 405

Query: 360  IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
            +DPRDAQAF+ LGELLISSDTGAALDAFK ARTL+KK G+EVPIEVLN+IG +HFE+ EF
Sbjct: 406  LDPRDAQAFVGLGELLISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEF 465

Query: 420  ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
            ESA ++FK+ALGDGIW++ LD K    +     S+L +KD  +FHR    G+ V++PWNK
Sbjct: 466  ESALENFKEALGDGIWISFLDEKEN--LEQTGVSVLGYKDTGIFHRLIESGHSVDVPWNK 523

Query: 480  VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
            VT LFNLARLLEQIH T AA+ +YRLILFKY  Y+DAYLRLAA AKA+NNL L+IELVNE
Sbjct: 524  VTTLFNLARLLEQIHKTEAATFMYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNE 583

Query: 540  ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 599
            ALKV+ K PNALS+LG+LELKNDDWVKAKETFRAA+DATDGKDSYA LSLGNWNYFAA+R
Sbjct: 584  ALKVDDKNPNALSLLGELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMR 643

Query: 600  NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA 659
            NEKR PKLEATHLEKAKELYT+V+ QH SN+YAANG+G+VLAEKGQFD++KD+FTQVQEA
Sbjct: 644  NEKRNPKLEATHLEKAKELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEA 703

Query: 660  ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAE 719
            ASGSVF+QMPDVW+NLAHVYFAQGNFAL +KMYQNCLRKF+YNTD+QILLYLARTHYEAE
Sbjct: 704  ASGSVFLQMPDVWVNLAHVYFAQGNFALTVKMYQNCLRKFFYNTDSQILLYLARTHYEAE 763

Query: 720  QWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVR 779
            QWQ+CKK+LLRAIHL PSNYT RFD G  MQK S+STLQK +RTADEVRSTVAE ENAVR
Sbjct: 764  QWQECKKTLLRAIHLTPSNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVR 823

Query: 780  VFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAA 839
            VF+ LSAAS+LH+HGFD KKI THV+YC HLL+AAK+HREAAE+EE QNRQR E ARQAA
Sbjct: 824  VFTQLSAASDLHVHGFDSKKIQTHVQYCSHLLEAAKVHREAAEQEELQNRQRLEVARQAA 883

Query: 840  LAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPAS-KRRERSEND 898
            LAEEARRKAEEQ+KY LEKRK E+E +RL+Q+EE FQR+KEQW+SSTP S KR++R E+D
Sbjct: 884  LAEEARRKAEEQRKYQLEKRKQEEELRRLKQEEEKFQRIKEQWKSSTPGSNKRKDRVEDD 943

Query: 899  DDEVGHSEKRRRKGGKRRKKDKSSRS-HYETEYAEADMMDYREEPEDEDASMNY-REPIG 956
            D E   SE+RR+KGGKRRKKDKSSR+ HYE +  EA  MD   E EDEDA+ NY RE   
Sbjct: 944  DGESKPSERRRKKGGKRRKKDKSSRARHYEDDEEEAATMDDHNEVEDEDANTNYNREDEM 1003

Query: 957  QMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQLRDN 1016
               + ++ V+++A+D LAAAGLED DVDD+  P+ +  RRRRALS SD++     +   N
Sbjct: 1004 TTQEAEEPVDDDAHDLLAAAGLEDPDVDDDEVPT-SGVRRRRALSSSDEEGELMEESHPN 1062

Query: 1017 TD---ELQDSDGE 1026
            +    E ++S+GE
Sbjct: 1063 SSPQKEKEESNGE 1075


>gi|297835872|ref|XP_002885818.1| hypothetical protein ARALYDRAFT_480219 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297331658|gb|EFH62077.1| hypothetical protein ARALYDRAFT_480219 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1058

 Score = 1499 bits (3882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 747/1033 (72%), Positives = 864/1033 (83%), Gaps = 37/1033 (3%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGSS +IDEYYADV+YERIAILNALG YY+YLGK ETK RE
Sbjct: 46   IAREYFKQGKIEQFRQILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKHRE 105

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KEE FILAT+YYNKASRIDMHEPSTWVGKGQLLLAKGE++ A  AFKIVL+   DNVPAL
Sbjct: 106  KEEQFILATRYYNKASRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPAL 165

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LGQA VEFNRGR+S+SL  YKRALQV P CP A                           
Sbjct: 166  LGQASVEFNRGRFSESLNLYKRALQVFPGCPAA--------------------------- 198

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            LDP+NVEALVAL +MDLQAN++ G+RKGM++MQ+AFEIYPYCA ALNYLANHFFFTGQHF
Sbjct: 199  LDPDNVEALVALGIMDLQANDSIGMRKGMDRMQQAFEIYPYCASALNYLANHFFFTGQHF 258

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI-NKPHEFIFP 299
            LVEQLTETALAVT HGPTKSHS+YNLARSYHSKGDYEKAG+YYMA++KE  NKP EF+FP
Sbjct: 259  LVEQLTETALAVTTHGPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETNNKPQEFVFP 318

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
            Y+GLGQVQLKLG+ + ++ NFEKVLE+YPDNCETLKALGH+Y QLGQ +KA E +RKA K
Sbjct: 319  YFGLGQVQLKLGELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNDKALEYMRKATK 378

Query: 360  IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
            +DPRDAQAF+ LGELLISSDTGAALDAFK ARTL+KK G+EVPIEVLN+IG +HFE+ EF
Sbjct: 379  LDPRDAQAFVGLGELLISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEF 438

Query: 420  ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
            ESA  +FK+ALGDGIW++ LD K    +     S+L +KD  +FHR    G+ V++PWNK
Sbjct: 439  ESALDNFKEALGDGIWISFLDEKEN--LEQTGVSVLGYKDTGIFHRLIESGHSVDVPWNK 496

Query: 480  VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
            VT LFNLARLLEQ+H T AA+ LY+LILFKY  Y+DAYLRLAA AKA+NNL L+IELVNE
Sbjct: 497  VTTLFNLARLLEQLHKTEAATFLYQLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNE 556

Query: 540  ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 599
            ALKV+ K PNALS+LG+LELKNDDWVKAKETFRAA+DATDGKDSYA LSLGNWNYFAA+R
Sbjct: 557  ALKVDDKNPNALSLLGELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMR 616

Query: 600  NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA 659
            NEKR PKLEATHLEKAKELYT+V+ QH SN+YAANG+G+VLAEKGQFD++KD+FTQVQEA
Sbjct: 617  NEKRNPKLEATHLEKAKELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEA 676

Query: 660  ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAE 719
            ASGSVF+QMPDVW+NLAHVYFAQGNFALA+KMYQNCLRKF+ NTD+QILLYLARTHYEAE
Sbjct: 677  ASGSVFLQMPDVWVNLAHVYFAQGNFALAVKMYQNCLRKFFNNTDSQILLYLARTHYEAE 736

Query: 720  QWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVR 779
            QWQ+CKK+LLRAIHL PSNYT RFD G  MQK S+STLQK +RTADEVRSTVAE ENAVR
Sbjct: 737  QWQECKKTLLRAIHLTPSNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVR 796

Query: 780  VFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAA 839
            VF+ LSAAS+LH+HGFD KKI THV+YC HLL+AAK+HREAAEREE QNRQR E ARQAA
Sbjct: 797  VFTQLSAASDLHVHGFDSKKIQTHVQYCSHLLEAAKVHREAAEREELQNRQRLEVARQAA 856

Query: 840  LAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPAS-KRRERSEND 898
            LAEEARRKAEEQ+KY LEKRK E+E +RL+Q+EE  QR+KEQW+SSTP S KR++R E+D
Sbjct: 857  LAEEARRKAEEQRKYQLEKRKQEEELRRLKQEEEKIQRIKEQWKSSTPGSHKRKDRVEDD 916

Query: 899  DDEVGHSEKRRRKGGKRRKKDKSSRS-HYETEYAEADMMDYREEPEDEDASMNY-REPIG 956
            D E   SE+RR+KGGKRRKKDKSSR+ HYE +  EA  MD   E EDEDA+ NY RE   
Sbjct: 917  DGEGKPSERRRKKGGKRRKKDKSSRARHYEDDEEEAATMDDHNEVEDEDANTNYNREDEM 976

Query: 957  QMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQLRDN 1016
               + ++ V+++A+D LAAAGLED DV D+  P+ +  RRRRALS SD++     + + N
Sbjct: 977  TNQEAEEPVDDDAHDLLAAAGLEDPDVYDDEVPA-SGVRRRRALSSSDEEGELMEESQPN 1035

Query: 1017 ---TDELQDSDGE 1026
               T E ++S+GE
Sbjct: 1036 QSPTREKEESNGE 1048


>gi|20197768|gb|AAM15237.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
          Length = 1115

 Score = 1467 bits (3798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 751/1080 (69%), Positives = 870/1080 (80%), Gaps = 80/1080 (7%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSP---------------EIDEYYADVRYERIAILNALG 45
            + REYFKQGK+EQFRQILEEGSS                +IDEYYADV+YERIAILNALG
Sbjct: 46   IAREYFKQGKIEQFRQILEEGSSSGKQLYDDAASICSRIDIDEYYADVKYERIAILNALG 105

Query: 46   VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA 105
             YY+YLGK ETK REKEE FI AT+YYNKASRIDMHEPSTWVGKGQLLLAKGE++ A  A
Sbjct: 106  AYYSYLGKTETKNREKEEQFISATRYYNKASRIDMHEPSTWVGKGQLLLAKGEIDNALQA 165

Query: 106  FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
            FKIVL+   DNVPALLGQA VEFNRGR+S+SL+                        YKL
Sbjct: 166  FKIVLDTAPDNVPALLGQASVEFNRGRFSESLQL-----------------------YKL 202

Query: 166  GQLGKARQAFQRA--------------------------------LQLDPENVEALVALA 193
            GQL KARQAF R                                 LQLDP+NVEALVAL 
Sbjct: 203  GQLDKARQAFDRVLQASGTGMFISSSYDIADCMRQQIVLITIILFLQLDPDNVEALVALG 262

Query: 194  VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
            +MDLQAN++ G+RKGM++MQ+AFEIYPYCA ALNYLANHFFFTGQHFLVEQLTETALAVT
Sbjct: 263  IMDLQANDSIGMRKGMDRMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVT 322

Query: 254  NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI-NKPHEFIFPYYGLGQVQLKLGD 312
             HGPTKSHS+YNLARSYHSKGD+EKAG+YYMA++KE  N PHEF+FPY+GLGQVQLKLG+
Sbjct: 323  THGPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFPYFGLGQVQLKLGE 382

Query: 313  FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             + ++ NFEKVLE+YPDNCETLKALGH+Y QLGQ EKA E +RKA K+DPRDAQAF+ LG
Sbjct: 383  LKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKATKLDPRDAQAFVGLG 442

Query: 373  ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 432
            ELLISSDTGAALDAFK ARTL+KK G+EVPIEVLN+IG +HFE+ EFESA ++FK+ALGD
Sbjct: 443  ELLISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEFESALENFKEALGD 502

Query: 433  GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 492
            GIW++ LD K    +     S+L +KD  +FHR    G+ V++PWNKVT LFNLARLLEQ
Sbjct: 503  GIWISFLDEKEN--LEQTGVSVLGYKDTGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQ 560

Query: 493  IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 552
            IH T AA+ +YRLILFKY  Y+DAYLRLAA AKA+NNL L+IELVNEALKV+ K PNALS
Sbjct: 561  IHKTEAATFMYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALS 620

Query: 553  MLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHL 612
            +LG+LELKNDDWVKAKETFRAA+DATDGKDSYA LSLGNWNYFAA+RNEKR PKLEATHL
Sbjct: 621  LLGELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMRNEKRNPKLEATHL 680

Query: 613  EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVW 672
            EKAKELYT+V+ QH SN+YAANG+G+VLAEKGQFD++KD+FTQVQEAASGSVF+QMPDVW
Sbjct: 681  EKAKELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVW 740

Query: 673  INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI 732
            +NLAHVYFAQGNFAL +KMYQNCLRKF+YNTD+QILLYLARTHYEAEQWQ+CKK+LLRAI
Sbjct: 741  VNLAHVYFAQGNFALTVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQECKKTLLRAI 800

Query: 733  HLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHL 792
            HL PSNYT RFD G  MQK S+STLQK +RTADEVRSTVAE ENAVRVF+ LSAAS+LH+
Sbjct: 801  HLTPSNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHV 860

Query: 793  HGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQK 852
            HGFD KKI THV+YC HLL+AAK+HREAAE+EE QNRQR E ARQAALAEEARRKAEEQ+
Sbjct: 861  HGFDSKKIQTHVQYCSHLLEAAKVHREAAEQEELQNRQRLEVARQAALAEEARRKAEEQR 920

Query: 853  KYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPAS-KRRERSENDDDEVGHSEKRRRK 911
            KY LEKRK E+E +RL+Q+EE FQR+KEQW+SSTP S KR++R E+DD E   SE+RR+K
Sbjct: 921  KYQLEKRKQEEELRRLKQEEEKFQRIKEQWKSSTPGSNKRKDRVEDDDGESKPSERRRKK 980

Query: 912  GGKRRKKDKSSRS-HYETEYAEADMMDYREEPEDEDASMNY-REPIGQMNDQDDDVEENA 969
            GGKRRKKDKSSR+ HYE +  EA  MD   E EDEDA+ NY RE      + ++ V+++A
Sbjct: 981  GGKRRKKDKSSRARHYEDDEEEAATMDDHNEVEDEDANTNYNREDEMTTQEAEEPVDDDA 1040

Query: 970  NDRLAAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQLRDNTD---ELQDSDGE 1026
            +D LAAAGLED DVDD+  P+ +  RRRRALS SD++     +   N+    E ++S+GE
Sbjct: 1041 HDLLAAAGLEDPDVDDDEVPT-SGVRRRRALSSSDEEGELMEESHPNSSPQKEKEESNGE 1099


>gi|23095913|dbj|BAC16228.1| putative TPR-containing nuclear phosphoprotein [Oryza sativa Japonica
            Group]
          Length = 1069

 Score = 1338 bits (3462), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 659/1040 (63%), Positives = 823/1040 (79%), Gaps = 32/1040 (3%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGS PEIDEYYADV+YERIAILNALG ++T+LGK+E  Q +
Sbjct: 46   IAREYFKQGKIEQFRQILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVERAQ-Q 104

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KE HF  ATQ YN+ASRID  EPSTW+G+GQL + K +++ AS +FKIVL+ D  N PAL
Sbjct: 105  KEVHFKEATQCYNRASRIDETEPSTWIGRGQLCVVKHDLQMASDSFKIVLDEDGSNFPAL 164

Query: 121  LGQACVEFNRG-----------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
            LGQA V F  G            Y +SL+ YKRAL+ + SCP A+RLGI  CRYKLGQ  
Sbjct: 165  LGQASVYFLMGDSEQQHKKALDYYRNSLDLYKRALRAYTSCPAAVRLGIAFCRYKLGQSD 224

Query: 170  KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
            KARQAFQR LQLDPEN++ALVALA+MDLQ NEA GIR+GMEKM+RAFEIYPYC +ALN+L
Sbjct: 225  KARQAFQRVLQLDPENIDALVALAIMDLQTNEAGGIRRGMEKMRRAFEIYPYCTLALNHL 284

Query: 230  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
            ANH+FFTGQHF+VEQLTETAL+ +NHG  KSH++YNLARSYHSKGD E AG YYMASV E
Sbjct: 285  ANHYFFTGQHFVVEQLTETALSSSNHGLLKSHAFYNLARSYHSKGDIETAGRYYMASVNE 344

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
            I+KP +F+ P++GLGQ+QLK  D++S+L +FEKVLE++P+NCE+LKA+GHIY + G+ +K
Sbjct: 345  ISKPQDFVLPFFGLGQIQLKFADYKSSLASFEKVLEVHPENCESLKAIGHIYAKSGENDK 404

Query: 350  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
            A E  +K  +IDP+D QAF++LGELL+ SD   A++  KTAR LLKKAGE++PIE+LN I
Sbjct: 405  AIETFKKVTRIDPKDHQAFMELGELLVQSDWATAMEYLKTARNLLKKAGEKIPIELLNGI 464

Query: 410  GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 469
            G++HFEKGE E A QSFK+ALGDG W++++D    + V++ S   +Q++D   F + E +
Sbjct: 465  GLLHFEKGELEMAEQSFKEALGDGFWVSIIDGSVGSSVVNWS---IQYRDQSFFQQLEEE 521

Query: 470  GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 529
            G  +ELPW+KVT LFN ARL E++HDTV AS+ YRLI+FKY DY+D YLRLAAIAK +NN
Sbjct: 522  GTPLELPWDKVTTLFNYARLFEELHDTVKASLFYRLIIFKYPDYIDTYLRLAAIAKEKNN 581

Query: 530  LQLSIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLS 588
            LQLSIEL+ +ALK++ KYPNALSMLG LEL+ D+ W+ AKE FR A DA++GKD+Y+ L 
Sbjct: 582  LQLSIELIGDALKIDDKYPNALSMLGSLELQGDETWLTAKEHFREAKDASEGKDTYSMLQ 641

Query: 589  LGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV 648
            LGNWNYFAA R EK+APK EATH EKAKELY+ V+ QH  N++AANG G++ AEK Q+D+
Sbjct: 642  LGNWNYFAANRPEKKAPKFEATHREKAKELYSNVLKQHHGNMFAANGIGILYAEKAQWDI 701

Query: 649  SKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQIL 708
            +K+LFTQV EAASGS+FVQMPDVWINLAH+YFAQG F  A+KMYQNCLRKF+YNTDA IL
Sbjct: 702  AKELFTQVHEAASGSIFVQMPDVWINLAHIYFAQGFFQQAVKMYQNCLRKFFYNTDATIL 761

Query: 709  LYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVR 768
            LYLARTHYEAEQWQDC+K+LLRAIHLAPSNY LRF+ GV+MQKFSASTLQKT+RT DEVR
Sbjct: 762  LYLARTHYEAEQWQDCRKTLLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKRTVDEVR 821

Query: 769  STVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN 828
            +TV+EL+NA+RVFS LS AS  H HGFDE+KI TH+EYCKHLLDAAK+HR+AAE+ EQQN
Sbjct: 822  ATVSELQNAIRVFSLLSVASTYHSHGFDERKIETHIEYCKHLLDAAKVHRDAAEQAEQQN 881

Query: 829  RQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSS--T 886
            +Q+ E ARQ ALA+EARRKAEEQ+K  LE+RK EDE K++ QQE+HF+RVKEQW++S  T
Sbjct: 882  KQKMEVARQIALADEARRKAEEQRKAQLERRKQEDELKQVMQQEQHFERVKEQWKTSSNT 941

Query: 887  PASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDED 946
            P  KR++RS+++D+E G  ++R++    RR+KD+ +++HY  E  +        E ED+ 
Sbjct: 942  PG-KRKDRSKHEDEEGGGEKRRKKG--GRRRKDQKTKAHYGEEEEDEYRD--EPEAEDDY 996

Query: 947  ASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDV--DDEMAPSITAARRRRALSESD 1004
            A+        + ND  D  E+     LAAAGLEDSD   DD   P     R+RRA SES+
Sbjct: 997  AN------TARSNDGGDS-EKAPGHLLAAAGLEDSDAEEDDMGHPQSAIERKRRAWSESE 1049

Query: 1005 DDEPFERQLRDNTDELQDSD 1024
            DDEP +R ++ +  E   SD
Sbjct: 1050 DDEPVQRPVQPSAGENDLSD 1069


>gi|357144204|ref|XP_003573209.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
            [Brachypodium distachyon]
          Length = 1064

 Score = 1312 bits (3396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1024 (64%), Positives = 825/1024 (80%), Gaps = 33/1024 (3%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGS PEIDEYYADV+YERIAILNALG ++T+LGK E +  +
Sbjct: 46   IAREYFKQGKIEQFRQILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKAE-RAPQ 104

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            +E HF  ATQYYN+ASRID  EPSTW+GKGQL +AKGE++ AS +FKIVL+ D DN PAL
Sbjct: 105  REVHFKDATQYYNRASRIDETEPSTWIGKGQLCVAKGEMQMASDSFKIVLDEDVDNFPAL 164

Query: 121  LGQACVEFNRGR-----------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
            LGQA V F  G            Y +SL+ YKRA++ +  CP A+RLGI  CRYK+GQL 
Sbjct: 165  LGQASVYFLMGDMEQQHKKALEFYRNSLDLYKRAMRAYADCPAAVRLGIAFCRYKIGQLD 224

Query: 170  KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
            +ARQAF+R LQLDPENV+ALVALA+MDLQ NEA  IR+GM+KM+RAFEI+PYC +ALN+L
Sbjct: 225  RARQAFERVLQLDPENVDALVALAIMDLQTNEAGVIRRGMDKMRRAFEIFPYCTLALNHL 284

Query: 230  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
            ANH+FFTGQHF+VEQLTETAL+ +NHG  KS +YYNLARSYHSKGD E AG YY+ASVKE
Sbjct: 285  ANHYFFTGQHFVVEQLTETALSSSNHGLLKSQAYYNLARSYHSKGDIETAGRYYIASVKE 344

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
            INKP +F+ P+ GLGQ+QLK GDF+ +L +FEKVLE++P+NCE+LKA+G+IY  LG+ +K
Sbjct: 345  INKPQDFVLPFVGLGQIQLKFGDFKRSLASFEKVLEVHPENCESLKAIGNIYANLGENDK 404

Query: 350  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
            A E  +K  +IDP+D QAF++LGELL+ SD  AA++  KTARTLLKKAGE+ P+E+LN I
Sbjct: 405  AIETFKKVTRIDPKDHQAFVELGELLVESDWAAAMEYLKTARTLLKKAGEKTPVELLNGI 464

Query: 410  GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 469
            G+++FEK EFE A QSFK+ALGDGIWL+++D    + ++  S   +Q++D   FH  E +
Sbjct: 465  GLLYFEKAEFELAEQSFKEALGDGIWLSIMDWSVGSSMVSWS---VQYRDQSFFHELE-E 520

Query: 470  GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 529
               +ELP +KVT LFN ARLLE++HDTV AS+LYRLI+FKY DY+DAYLRLAAIAK +NN
Sbjct: 521  RVPLELPCDKVTTLFNYARLLEELHDTVKASLLYRLIIFKYADYIDAYLRLAAIAKEKNN 580

Query: 530  LQLSIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLS 588
            +QLSIEL+ +ALK+N KYPNALSMLG LEL++D+ W+ AKE FR A D+T+GKD Y+ L 
Sbjct: 581  IQLSIELIGDALKINSKYPNALSMLGSLELQSDETWLTAKERFRDAKDSTEGKDPYSLLQ 640

Query: 589  LGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV 648
            LGNWNYFAA R EK+APK EATH EKAKELY  V+ Q+  N++AANG G++ AEK Q+D+
Sbjct: 641  LGNWNYFAANRPEKKAPKFEATHREKAKELYLNVLKQNPGNMFAANGIGILHAEKAQWDI 700

Query: 649  SKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQIL 708
            +K+LFTQV EAASGS+FVQ+PDVWINLAH++FAQG F  A+KMYQNCLRKF+YNTDA IL
Sbjct: 701  AKELFTQVHEAASGSIFVQVPDVWINLAHIFFAQGLFQQAVKMYQNCLRKFFYNTDATIL 760

Query: 709  LYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVR 768
            LYL+RTHYEAEQWQDC+KSLLRAIHLAPSNY LRF+ GV+MQKFSASTLQKT+RT +EVR
Sbjct: 761  LYLSRTHYEAEQWQDCRKSLLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKRTVEEVR 820

Query: 769  STVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN 828
            +TV EL+NA+RVFS LS AS  H HGFDE+KI THVEYCKHLLDAAK+HR+AAE+ EQQN
Sbjct: 821  ATVTELQNAIRVFSLLSVASTYHSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQQN 880

Query: 829  RQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSS--T 886
            RQ+ E ARQ ALAEEARR+AEEQ+K+ LE+RK EDE K++ QQE+HF+RVKEQW++S  T
Sbjct: 881  RQKLEVARQIALAEEARRRAEEQRKFQLERRKQEDELKQVMQQEQHFERVKEQWKTSSNT 940

Query: 887  PASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDED 946
            P  KR++RS+++D++ G  ++RR+    +R+KD+ ++     +Y E +  +YR EPED+ 
Sbjct: 941  PG-KRKDRSKHEDEDGGGEKRRRKG--GKRRKDQKTK----MQYGEEEEDEYRNEPEDDY 993

Query: 947  ASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITAARRRRALSESDDD 1006
            A++  R+  G      D +E+  +  L AAGLEDSD +D+M P     R+RRA SESD+D
Sbjct: 994  ANIT-RDTGG------DKLEKAPDHLLVAAGLEDSDAEDDMVPQSAIERKRRAWSESDED 1046

Query: 1007 EPFE 1010
            EP +
Sbjct: 1047 EPVQ 1050


>gi|414585831|tpg|DAA36402.1| TPA: hypothetical protein ZEAMMB73_637393 [Zea mays]
          Length = 1065

 Score = 1305 bits (3376), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/1027 (63%), Positives = 825/1027 (80%), Gaps = 37/1027 (3%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGS PEIDEYYADV+YERIAIL ALG ++T+LGK++ +  +
Sbjct: 46   IAREYFKQGKIEQFRQILEEGSGPEIDEYYADVKYERIAILTALGAFHTFLGKVD-RAPQ 104

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KE HF  ATQYYN+ASRID  EPSTW+G+GQL +AKGE++ AS +FKIVL+ D +N PAL
Sbjct: 105  KESHFKDATQYYNRASRIDETEPSTWIGRGQLCIAKGELQMASDSFKIVLDEDENNFPAL 164

Query: 121  LGQACVEFNRG-----------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
            LGQA V F  G            Y +SL+ YK+AL+V+ +CP A+RLGI  CRYKLGQ+ 
Sbjct: 165  LGQASVYFLMGEAEQQHKKSLEHYRNSLDLYKKALRVYCNCPAAVRLGIAFCRYKLGQVE 224

Query: 170  KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
            KARQAFQR L+LDP+NV+ALVALA+MDLQ NEA GIR+GMEKM++AFEIYPY  +ALN+L
Sbjct: 225  KARQAFQRVLELDPQNVDALVALAIMDLQTNEAGGIRRGMEKMKKAFEIYPYYTLALNHL 284

Query: 230  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
            ANH+FFTGQHF+VEQLTETAL+ +NHG  KSH+YYNLARSYHSKGD E AG YYMASV E
Sbjct: 285  ANHYFFTGQHFVVEQLTETALSSSNHGLLKSHAYYNLARSYHSKGDIETAGRYYMASVNE 344

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
            I+KP +F+ PY GLGQ+QLK GDF+S+L +FEKVLE++P+NCE+LKA+GHI+ + G+ EK
Sbjct: 345  ISKPQDFVLPYIGLGQIQLKFGDFKSSLGSFEKVLEVHPENCESLKAIGHIHAKSGETEK 404

Query: 350  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
            A E  +K  +IDP+D QAF++LGELL+ SD  AA++  KTAR LLKKAGE VP+E+LN I
Sbjct: 405  AIETFKKVTRIDPKDHQAFVELGELLVESDWAAAMEYLKTARNLLKKAGEAVPVELLNGI 464

Query: 410  GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 469
            G++HFEKGEFE A QSFK+ALGDG+W++++D K  + +I+ S   +Q KD   FH+ E  
Sbjct: 465  GLLHFEKGEFEMAEQSFKEALGDGLWVSIMDGKVGSSMINWS---VQNKDQSFFHQLE-- 519

Query: 470  GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 529
            G  +EL  NKVT LFN ARLLE++HD+V AS+ YR I+FKY DY+DAYLRLAAIAK RNN
Sbjct: 520  GVPLELHSNKVTTLFNYARLLEELHDSVRASIFYRFIIFKYPDYIDAYLRLAAIAKQRNN 579

Query: 530  LQLSIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLS 588
            +QLSIEL+ +ALK++ K PNALSMLG LEL++D+ W+ AKE FR A +AT G D+Y+ L 
Sbjct: 580  VQLSIELIGDALKIDEKNPNALSMLGSLELQSDEAWLTAKEHFRNAKEATKG-DTYSLLQ 638

Query: 589  LGNWNYFAALRNEKRAPKLEATHLEKAKELY-TRVIVQHTSNLYAANGAGVVLAEKGQFD 647
            LGNWNYFAA R EK+APK+EATH EKA ELY T+V+ QH SN++AANG G++ AEK ++D
Sbjct: 639  LGNWNYFAANRPEKKAPKIEATHREKAMELYQTQVLKQHRSNMFAANGIGILYAEKAKWD 698

Query: 648  VSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQI 707
            V+K+LFTQV EAASGS+FV MPDVWINLAH YFAQG+F  A+K+YQNCLRKF++NTDA I
Sbjct: 699  VAKELFTQVHEAASGSIFVHMPDVWINLAHTYFAQGHFQQAVKLYQNCLRKFFHNTDATI 758

Query: 708  LLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEV 767
            LLYLARTHYEAE+WQDC+K+LLRAIHLAPSNY LRF+ GV+MQKFSASTLQKT++T DEV
Sbjct: 759  LLYLARTHYEAERWQDCRKTLLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKQTVDEV 818

Query: 768  RSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQ 827
            R+TV EL+NA+RVFS LS AS  H HGFDE+KI THVEYCKHLLDAAK+HR+AAE+ EQQ
Sbjct: 819  RATVTELQNAIRVFSLLSVASTYHSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQQ 878

Query: 828  NRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSS-- 885
            N+Q+ E ARQ ALAEEARR+AEEQ+K+ LE+R+ EDE K+++QQEEHFQRVKEQW++S  
Sbjct: 879  NKQKMEVARQIALAEEARRRAEEQRKFQLERRREEDELKQVKQQEEHFQRVKEQWKTSSN 938

Query: 886  TPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDE 945
            TP  KR++RS+ +D+EVG+ ++RR+   ++ +K K      E E        Y++EPE +
Sbjct: 939  TPG-KRKDRSKTEDEEVGNKKRRRKGIRRKDQKTKMQYGEEEDE--------YKDEPEAD 989

Query: 946  DASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDVDDEMA-PSITAARRRRALSESD 1004
            D   +Y + + + N  D+  E   +  LAAAGL+DSD +D+M  P     R+RRA SES+
Sbjct: 990  D---DYAD-LARYNGADNS-ERAPDHLLAAAGLDDSDAEDDMGHPQSAIERKRRAWSESE 1044

Query: 1005 DDEPFER 1011
            DDEP ++
Sbjct: 1045 DDEPVKK 1051


>gi|242076856|ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
 gi|241939547|gb|EES12692.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
          Length = 1069

 Score = 1285 bits (3325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/1027 (62%), Positives = 820/1027 (79%), Gaps = 33/1027 (3%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGS PEIDEYYADV+YERIAILNALG ++T+LGK++ +  +
Sbjct: 46   IAREYFKQGKIEQFRQILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVD-RAPQ 104

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KE HF  ATQYYN+ASRID  EPSTW+GKGQL +AKGE++ AS +FKIVL+ D +N PAL
Sbjct: 105  KESHFKDATQYYNRASRIDETEPSTWIGKGQLCVAKGELQMASDSFKIVLDEDGNNFPAL 164

Query: 121  LGQACVEFNRG-----------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
            LGQA V F  G            Y +SL+ YKRAL+V+ +CP A+RLGI  CRYKLGQ+ 
Sbjct: 165  LGQASVYFLMGEGEQQHKKSLEHYRNSLDLYKRALRVYSNCPAAVRLGIAFCRYKLGQVE 224

Query: 170  KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
            KARQAFQR L+LDP+NV+ALVALA+MDLQ NEA GIR GMEKM++AFEIYPY  +ALN+L
Sbjct: 225  KARQAFQRVLELDPQNVDALVALAIMDLQTNEAGGIRSGMEKMKKAFEIYPYYTLALNHL 284

Query: 230  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
            ANH+FFTGQHF+VEQLTETAL+ +NH   KSH+YYNLARSYHSKGD E AG YYMASV E
Sbjct: 285  ANHYFFTGQHFVVEQLTETALSSSNHVLLKSHAYYNLARSYHSKGDIETAGRYYMASVNE 344

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
            I+KP +F+ PY GLGQ+QLK GD +S+L +FEKVLE++P+NCE+LKA+GHI+ + G+ EK
Sbjct: 345  ISKPQDFVLPYIGLGQIQLKFGDLKSSLGSFEKVLEVHPENCESLKAIGHIHAKSGETEK 404

Query: 350  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
            A E  +K  +IDP+D QAF++LGELL+ SD  AA++  KTAR LLKKAGE VP+E+LN I
Sbjct: 405  AIETFKKVTRIDPKDHQAFVELGELLVESDWAAAMEYLKTARNLLKKAGEAVPVELLNGI 464

Query: 410  GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 469
            G++HFEKGEFE A QSFK+ALGDG+W++++D K  + +++ S   +Q KD   FH+ E +
Sbjct: 465  GLLHFEKGEFEMAEQSFKEALGDGLWVSVMDGKVGSSMVNWS---VQNKDQSFFHQLEEE 521

Query: 470  GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 529
            G  +EL   KVT LFN ARLLE++HD+V AS+ YR I+FKY DY+DAYLRLAAIAK RNN
Sbjct: 522  GVPLELHSIKVTTLFNYARLLEELHDSVRASLFYRFIIFKYPDYIDAYLRLAAIAKQRNN 581

Query: 530  LQLSIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLS 588
            +QLSIEL+ +ALK++ K PNALSMLG LEL++D+ W+ AKE FR+A +AT G D+Y+ L 
Sbjct: 582  VQLSIELIGDALKIDEKNPNALSMLGSLELQSDETWLTAKEHFRSAKEATKG-DTYSLLQ 640

Query: 589  LGNWNYFAALRNEKRAPKLEATHLEKAKELY-TRVIVQHTSNLYAANGAGVVLAEKGQFD 647
            LGNWNYFAA R EK+APK+EATH EKA ELY ++V+  H SN++AANG G++ AEK ++D
Sbjct: 641  LGNWNYFAANRPEKKAPKIEATHREKAMELYQSQVLKHHRSNMFAANGIGILYAEKAKWD 700

Query: 648  VSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQI 707
            V+K+LFTQV EAASGS+FV MPDVWINLAH YFAQG+F  A+KMYQNCLRKF++NTDA I
Sbjct: 701  VAKELFTQVHEAASGSIFVHMPDVWINLAHTYFAQGHFQQAVKMYQNCLRKFFHNTDATI 760

Query: 708  LLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEV 767
            LLYLARTHYEAE+WQDC+K+LLRAIHLAPSNY LRF+ GV+MQKFSASTLQK ++T DEV
Sbjct: 761  LLYLARTHYEAERWQDCRKTLLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKAKQTVDEV 820

Query: 768  RSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQ 827
            R+TV EL+NA+RVFS LS AS  H HGFDE+KI THVEYCKHLL+AAK+HR+AAE+ EQQ
Sbjct: 821  RATVTELQNAIRVFSLLSVASTYHSHGFDERKIETHVEYCKHLLNAAKVHRDAAEQAEQQ 880

Query: 828  NRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSS-- 885
            N+Q+ E ARQ ALAEEARR+AEEQ+K+ LE+R+ EDE K+++QQEEHF+RVKEQW++S  
Sbjct: 881  NKQKMEVARQIALAEEARRRAEEQRKFQLERRREEDELKQVKQQEEHFERVKEQWKTSSH 940

Query: 886  TPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDE 945
            TP  KR++RS+ +D+EVG+ ++RR+    RR+KD+ ++  Y  E  +    +   + +  
Sbjct: 941  TPG-KRKDRSKTEDEEVGNEKRRRKG--IRRRKDQKTKMQYGEEEEDEYKDEPEADDDYA 997

Query: 946  DASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDVDDEMA-PSITAARRRRALSESD 1004
            D        + + N  D+  E+  +  LAAAGL+DSD +D+M  P     R+RRA SES+
Sbjct: 998  D--------LARYNGADNS-EKAPDHLLAAAGLDDSDAEDDMGHPQSAIERKRRAWSESE 1048

Query: 1005 DDEPFER 1011
            DDEP ++
Sbjct: 1049 DDEPVKK 1055


>gi|147781154|emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
          Length = 788

 Score = 1260 bits (3260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/697 (85%), Positives = 647/697 (92%), Gaps = 1/697 (0%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           + REYFKQGK++QFRQILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQRE
Sbjct: 46  IAREYFKQGKIDQFRQILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQRE 105

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           KEEHFILATQYYNKASRIDMHE STWVGKGQLLLAKG+VEQA +AFKIVL+ DRDNVPAL
Sbjct: 106 KEEHFILATQYYNKASRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPAL 165

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LGQACVEFNRGRYSDSL+ YKRALQV+P CP A+R+GIGLC YKLGQ  KAR+AFQR LQ
Sbjct: 166 LGQACVEFNRGRYSDSLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQ 225

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LDPENVEALVAL +MDL  N+A+GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF
Sbjct: 226 LDPENVEALVALGIMDLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE NKPH+F+ PY
Sbjct: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPY 345

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           YGLGQVQLKLGDFRS+L+NFEKVLE+YP+NCE LKALGHIYVQLGQ EKAQE LRKA KI
Sbjct: 346 YGLGQVQLKLGDFRSSLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKI 405

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
           DPRDAQAF+DLGELLI+SDTGAALDAFKTAR LLKK GEEVPIE+LNNIGV++FE+GEFE
Sbjct: 406 DPRDAQAFLDLGELLITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFE 465

Query: 421 SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
            A Q+FK+A+GDGIWL+ +D K  +Y  DA  SM  FKDMQLFH+ E DG+ VELPWNKV
Sbjct: 466 LAEQTFKEAVGDGIWLSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKV 525

Query: 481 TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
           TVLFNLARLLEQ+++T  AS+LYRLILFK+ DY+DAYLRLAAIAKARNN+QLSIELV +A
Sbjct: 526 TVLFNLARLLEQLNNTKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDA 585

Query: 541 LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN 600
           LKVN K PN+L MLGDLELKNDDWVKAKETFR+ASDATDGKDSYATLSLGNWNYFAA+R+
Sbjct: 586 LKVNDKGPNSLCMLGDLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRS 645

Query: 601 EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
           EKRAPKLEATHLEKAKELYTRV+VQH +NLYAANGAGVVLAEKG FDVSKD+FTQVQEAA
Sbjct: 646 EKRAPKLEATHLEKAKELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAA 705

Query: 661 SGSVFVQMPDVWINLAHVYFAQGNFALAMK-MYQNCL 696
           SGSVFVQMPDVWINLAHVYFAQGNFALA+K MY +C 
Sbjct: 706 SGSVFVQMPDVWINLAHVYFAQGNFALAVKMMYTHCF 742


>gi|222637020|gb|EEE67152.1| hypothetical protein OsJ_24219 [Oryza sativa Japonica Group]
          Length = 1053

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1056 (59%), Positives = 798/1056 (75%), Gaps = 80/1056 (7%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + REYFKQGK+EQFRQILEEGS PEIDEYYADV+YERIAILNALG ++T+LGK+E  Q +
Sbjct: 46   IAREYFKQGKIEQFRQILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVERAQ-Q 104

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            KE HF  ATQ YN+ASRID  EPSTW+G+GQL + K +++ AS +FKIVL+ D  N PAL
Sbjct: 105  KEVHFKEATQCYNRASRIDETEPSTWIGRGQLCVVKHDLQMASDSFKIVLDEDGSNFPAL 164

Query: 121  LGQACVEFNRG----RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 176
            LGQA V F  G    ++  +L++Y+ +L ++                             
Sbjct: 165  LGQASVYFLMGDSEQQHKKALDYYRNSLDLY----------------------------- 195

Query: 177  RALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 236
               +LDPEN++ALVALA+MDLQ NEA GIR+GMEKM+RAFEIYPYC +ALN+LANH+FFT
Sbjct: 196  ---KLDPENIDALVALAIMDLQTNEAGGIRRGMEKMRRAFEIYPYCTLALNHLANHYFFT 252

Query: 237  GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
            GQHF+VEQLTETAL+ +NHG  KSH++YNLARSYHSKGD E AG YYMASV EI+KP +F
Sbjct: 253  GQHFVVEQLTETALSSSNHGLLKSHAFYNLARSYHSKGDIETAGRYYMASVNEISKPQDF 312

Query: 297  IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
            + P++GLGQ+QLK  D++S+L +FEKVLE++P+NCE+LKA+GHIY + G+ +KA E  +K
Sbjct: 313  VLPFFGLGQIQLKFADYKSSLASFEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFKK 372

Query: 357  AAKIDPRDAQAFIDLGELLISSDTGAALDAFKT-----------------------ARTL 393
              +IDP+D QAF++LGELL+ SD   A++  KT                       AR L
Sbjct: 373  VTRIDPKDHQAFMELGELLVQSDWATAMEYLKTVRLFTSLEVYSVSLYQILPWISQARNL 432

Query: 394  LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
            LKKAGE++PIE+LN IG++HFEKGE E A QSFK+ALGDG W++++D    + V++ S  
Sbjct: 433  LKKAGEKIPIELLNGIGLLHFEKGELEMAEQSFKEALGDGFWVSIIDGSVGSSVVNWS-- 490

Query: 454  MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             +Q++D   F + E +G  +ELPW+KVT LFN ARL E++HDTV AS+ YRLI+FKY DY
Sbjct: 491  -IQYRDQSFFQQLEEEGTPLELPWDKVTTLFNYARLFEELHDTVKASLFYRLIIFKYPDY 549

Query: 514  VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAKETFR 572
            +D YLRLAAIAK +NNLQLSIEL+ +ALK++ KYPNALSMLG LEL+ D+ W+ AKE FR
Sbjct: 550  IDTYLRLAAIAKEKNNLQLSIELIGDALKIDDKYPNALSMLGSLELQGDETWLTAKEHFR 609

Query: 573  AASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYA 632
             A DA++GKD+Y+ L LGNWNYFAA R EK+APK EATH EKAKELY+ V+ QH  N++A
Sbjct: 610  EAKDASEGKDTYSMLQLGNWNYFAANRPEKKAPKFEATHREKAKELYSNVLKQHHGNMFA 669

Query: 633  ANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 692
            ANG G++ AEK Q+D++K+LFTQV EAASGS+FVQMPDVWINLAH+YFAQG F  A+KMY
Sbjct: 670  ANGIGILYAEKAQWDIAKELFTQVHEAASGSIFVQMPDVWINLAHIYFAQGFFQQAVKMY 729

Query: 693  QNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 752
            QNCLRKF+YNTDA ILLYLARTHYEAEQWQDC+K+LLRAIHLAPSNY LRF+ GV+MQKF
Sbjct: 730  QNCLRKFFYNTDATILLYLARTHYEAEQWQDCRKTLLRAIHLAPSNYLLRFNVGVSMQKF 789

Query: 753  SASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLD 812
            SASTLQKT+RT DEVR+TV+EL+NA+RVFS LS AS  H HGFDE+KI TH+EYCKHLLD
Sbjct: 790  SASTLQKTKRTVDEVRATVSELQNAIRVFSLLSVASTYHSHGFDERKIETHIEYCKHLLD 849

Query: 813  AAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQE 872
            AAK+HR+AAE+ EQQN+Q+ E ARQ ALA+EARRKAEEQ+K  LE+RK EDE K++ QQE
Sbjct: 850  AAKVHRDAAEQAEQQNKQKMEVARQIALADEARRKAEEQRKAQLERRKQEDELKQVMQQE 909

Query: 873  EHFQRVKEQWRSS--TPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEY 930
            +HF+RVKEQW++S  TP  KR++RS+++D+E G  ++R++    RR+KD+ +++HY  E 
Sbjct: 910  QHFERVKEQWKTSSNTPG-KRKDRSKHEDEEGGGEKRRKKG--GRRRKDQKTKAHYGEEE 966

Query: 931  AEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDV--DDEMA 988
             +        E ED+ A+        + ND  D  E+     LAAAGLEDSD   DD   
Sbjct: 967  EDEYRD--EPEAEDDYAN------TARSNDGGDS-EKAPGHLLAAAGLEDSDAEEDDMGH 1017

Query: 989  PSITAARRRRALSESDDDEPFERQLRDNTDELQDSD 1024
            P     R+RRA SES+DDEP +R ++ +  E   SD
Sbjct: 1018 PQSAIERKRRAWSESEDDEPVQRPVQPSAGENDLSD 1053


>gi|302785157|ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
 gi|300157948|gb|EFJ24572.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
          Length = 1041

 Score = 1209 bits (3129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/881 (64%), Positives = 715/881 (81%), Gaps = 6/881 (0%)

Query: 3   REYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKE 62
           REYFKQ KV++F QILEEGSSPEIDEYY+DV+Y+RIAILNALG YYT LGKIE KQR+  
Sbjct: 48  REYFKQDKVKEFLQILEEGSSPEIDEYYSDVKYDRIAILNALGAYYTNLGKIEFKQRD-- 105

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           EHFI AT YYNKA+RID  EP+TW GKGQLLLAKG+ EQ    FKIVL+   DN+ ALLG
Sbjct: 106 EHFIRATHYYNKATRIDYDEPTTWAGKGQLLLAKGDYEQMFDVFKIVLDVRPDNLLALLG 165

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           QAC +FNRGR+ +SL  YKR LQ+HP CP ++RLG+G CRY+LGQL KARQAFQR LQLD
Sbjct: 166 QACAQFNRGRFQESLGLYKRVLQMHPGCPASVRLGLGFCRYRLGQLSKARQAFQRVLQLD 225

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           PEN++ALVAL +MD+ AN+A  +++G +KM  AFEIYPYCA ALN+LANH+F+T QH +V
Sbjct: 226 PENLDALVALGIMDINANDAESVQEGTKKMLEAFEIYPYCATALNHLANHYFYTEQHGVV 285

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           EQL ETALA T++   KS SY+NLARSYHSKGDY+KA  YY ASV+E+  P +FI PYYG
Sbjct: 286 EQLMETALASTDNALIKSQSYFNLARSYHSKGDYDKAAAYYRASVQELKSPKDFILPYYG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LGQVQLKL D +SAL+NFEKVL+++P+NCETLK +G+I++Q G+ +KA E  RKAAK+ P
Sbjct: 346 LGQVQLKLNDLKSALSNFEKVLDVHPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSP 405

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
           RD  A+I++GELL+S+D  AALDAFKTA  L  K+GE+VP+ +LNNIGV+HFE+GE++ A
Sbjct: 406 RDVDAWIEIGELLVSTDFSAALDAFKTAHNLQTKSGEKVPLGLLNNIGVLHFERGEYKLA 465

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
             ++ +ALG+G W    ++   T +      + +F    +F R E  G  +++P  KVTV
Sbjct: 466 EGAYYEALGEGPWKEFNENNFST-ITGGDGPLEKF---DVFQRIEEQGTSLDIPAEKVTV 521

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           LFNLARL EQ+H+T  A++LY+LILFK+  YVDAYLRLAA+A+ARNNL LS+ELV + LK
Sbjct: 522 LFNLARLFEQLHETEKANLLYQLILFKHPSYVDAYLRLAAMAEARNNLSLSMELVQKGLK 581

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 602
            +    + LS  G LELK D+W+KAK+T +     +DGKDS++ L+LGNWNYFAA R+EK
Sbjct: 582 EDDNDVDILSFRGSLELKADEWLKAKDTLKGIQSVSDGKDSFSNLALGNWNYFAATRSEK 641

Query: 603 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 662
           R PKLEATHLEKA+ELY +V+ Q ++N+YAANG G+V +EKG FD++KD+FTQVQEAASG
Sbjct: 642 RDPKLEATHLEKARELYQKVLTQKSNNMYAANGLGIVFSEKGMFDIAKDIFTQVQEAASG 701

Query: 663 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 722
           +V V+MPDVW+NLAHVY AQG+F LA+KMYQNCLR+FY+NT+  ILLYLARTHYEAEQWQ
Sbjct: 702 NVAVEMPDVWVNLAHVYLAQGHFGLAVKMYQNCLRRFYFNTETNILLYLARTHYEAEQWQ 761

Query: 723 DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFS 782
           +CK+ L+ AIH+APSNY LRFDA + MQKFS +TLQK +RTADEVR +VAE++NAVR+F+
Sbjct: 762 ECKRVLMHAIHMAPSNYMLRFDAAITMQKFSTATLQKQKRTADEVRQSVAEVKNAVRLFT 821

Query: 783 HLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAE 842
            LS  S+ H+HGFDEKKI  HV+YCKHLLDAAK+H EAAEREEQQNRQ+QE ARQ A+A+
Sbjct: 822 QLSLISSHHMHGFDEKKIGMHVDYCKHLLDAAKLHLEAAEREEQQNRQKQEVARQLAMAQ 881

Query: 843 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWR 883
           EA+RKA+E++K  +EKRK E+E +R+ +QE HFQRVKE W+
Sbjct: 882 EAQRKADEERKLQIEKRKREEEHRRVMEQELHFQRVKETWK 922


>gi|17979432|gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
          Length = 740

 Score = 1152 bits (2981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/692 (78%), Positives = 616/692 (89%), Gaps = 3/692 (0%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           + REYFKQGK+EQFRQILEEGSS +IDEYYADV+YERIAILNALG YY+YLGK ETK RE
Sbjct: 46  IAREYFKQGKIEQFRQILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKNRE 105

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           KEE FI AT+YYNKASRIDMHEPSTWVGKGQLLLAKGE++ A  AFKIVL+   DNVPAL
Sbjct: 106 KEEQFISATRYYNKASRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPAL 165

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LGQA VEFNRGR+S+SL+ YKRALQV P CP A+RLGIGLCRYKLGQL KARQAF R LQ
Sbjct: 166 LGQASVEFNRGRFSESLQLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQ 225

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LDP+NVEALVAL +MDLQAN++ G+RKGM++MQ+AFEIYPYCA ALNYLANHFFFTGQHF
Sbjct: 226 LDPDNVEALVALGIMDLQANDSIGMRKGMDRMQQAFEIYPYCASALNYLANHFFFTGQHF 285

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI-NKPHEFIFP 299
           LVEQLTETALAVT HGPTKSHS+YNLARSYHSKGD+EKAG+YYMA++KE  N PHEF+FP
Sbjct: 286 LVEQLTETALAVTTHGPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFP 345

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y+GLGQVQLKLG+ + ++ NFEKVLE+YPDNCETLKALGH+Y QLGQ EKA E +RKA K
Sbjct: 346 YFGLGQVQLKLGELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKATK 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
           +DPRDAQAF+ LGELLISSDTGAALDAFK ARTL+KK G+EVPIEVLN+IG +HFE+ EF
Sbjct: 406 LDPRDAQAFVGLGELLISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEF 465

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           ESA ++FK+ALGDGIW++ LD K    +     S+L +KD  +FHR    G+ V++PWNK
Sbjct: 466 ESALENFKEALGDGIWISFLDEKEN--LEQTGVSVLGYKDTGIFHRLIESGHSVDVPWNK 523

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT LFNLARLLEQIH T AA+ +YRLILFKY  Y+DAYLRLAA AKA+NNL L+IELVNE
Sbjct: 524 VTTLFNLARLLEQIHKTEAATFMYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNE 583

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 599
           ALKV+ K PNALS+LG+LELKNDDWVKAKETFRAA+DATDGKDSYA LSLGNWNYFAA+R
Sbjct: 584 ALKVDDKNPNALSLLGELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMR 643

Query: 600 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA 659
           NEKR PKLEATHLEKAKELYT+V+ QH SN+YAANG+G+VLAEKGQFD++KD+FTQVQEA
Sbjct: 644 NEKRNPKLEATHLEKAKELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEA 703

Query: 660 ASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 691
           ASGSVF+QMPDVW+NLAHVYFAQGNFAL +KM
Sbjct: 704 ASGSVFLQMPDVWVNLAHVYFAQGNFALTVKM 735


>gi|302818335|ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
 gi|300141402|gb|EFJ08114.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
          Length = 973

 Score = 1137 bits (2941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/877 (62%), Positives = 688/877 (78%), Gaps = 33/877 (3%)

Query: 3   REYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKE 62
           REYFKQ KV++F QILEEGSSPEIDEYY+DV+Y+RIAILNALG YYT LGKIE KQR+  
Sbjct: 48  REYFKQDKVKEFLQILEEGSSPEIDEYYSDVKYDRIAILNALGAYYTNLGKIEFKQRD-- 105

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           EHFI AT YYNKA+RID  EP+TW GKGQLLLAKG+ EQ    FKIVL+   DN+ ALLG
Sbjct: 106 EHFIRATHYYNKATRIDYDEPTTWAGKGQLLLAKGDYEQMFDVFKIVLDVRPDNLLALLG 165

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           QAC +FNRGR+ +SL  YKR LQ+HP CP +                           LD
Sbjct: 166 QACAQFNRGRFQESLGLYKRVLQMHPGCPAS---------------------------LD 198

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           PEN++ALVAL +MD+ AN+A  +++G +KM  AFEIYPYCA ALN+LANH+F+T QH +V
Sbjct: 199 PENLDALVALGIMDINANDAESVQEGTKKMLEAFEIYPYCATALNHLANHYFYTEQHGVV 258

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           EQL ETALA T++   KS SY+NLARSYHSKGDY+KA  YY ASV+E+  P +FI PYYG
Sbjct: 259 EQLMETALASTDNALIKSQSYFNLARSYHSKGDYDKAAAYYRASVQELKSPKDFILPYYG 318

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LGQVQLKL D +SAL+NFEKVL+++P+NCETLK +G+I++Q G+ +KA E  RKAAK+ P
Sbjct: 319 LGQVQLKLNDLKSALSNFEKVLDVHPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSP 378

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
           RD  A+I++GELL+S+D  AALDAFKTA  L  K+GE+VP+ +LNNIGV+HFE+GE++ A
Sbjct: 379 RDVDAWIEIGELLVSTDFSAALDAFKTAHNLQTKSGEKVPLGLLNNIGVLHFERGEYKLA 438

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
             ++ +ALG+G W    ++   T +      + +F    +F R E  G  +++P  KVTV
Sbjct: 439 EGAYYEALGEGPWKEFNENNFST-ITGGDGPLEKF---DVFQRIEEQGTSLDIPAEKVTV 494

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           LFNLARL EQ+H+T  A++LY+LILFK+  YVDAYLRLAA+A+ARNNL LS+ELV + LK
Sbjct: 495 LFNLARLFEQLHETEKANLLYQLILFKHPSYVDAYLRLAAMAEARNNLSLSMELVQKGLK 554

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 602
            +    + LS  G LELK D+W+KAK+T +     +DGKDS++ L+LGNWNYFAA R+EK
Sbjct: 555 EDDNDVDILSFRGSLELKADEWLKAKDTLKGIQSVSDGKDSFSNLALGNWNYFAATRSEK 614

Query: 603 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 662
           R PKLEATHLEKA+ELY +V+ Q ++N+YAANG G+V +EKG FD++KD+FTQVQEAASG
Sbjct: 615 RDPKLEATHLEKARELYQKVLTQKSNNMYAANGLGIVFSEKGMFDIAKDIFTQVQEAASG 674

Query: 663 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 722
           +V V+MPDVW+NLAHVY AQG+F LA+KMYQNCLR+FY+NT+  ILLYLARTHYEAEQWQ
Sbjct: 675 NVAVEMPDVWVNLAHVYLAQGHFGLAVKMYQNCLRRFYFNTETNILLYLARTHYEAEQWQ 734

Query: 723 DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFS 782
           +CK+ L+ AIH+APSNY LRFDA + MQKFS +TLQK +RTADEVR +VAE++NAVR+F+
Sbjct: 735 ECKRVLMHAIHMAPSNYMLRFDAAITMQKFSTATLQKQKRTADEVRQSVAEVKNAVRLFT 794

Query: 783 HLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAE 842
            LS  S+ H+HGFDEKKI  HV+YCKHLLDAAK+H EAAEREEQQNRQ+QE ARQ A+A+
Sbjct: 795 QLSLISSHHMHGFDEKKIGMHVDYCKHLLDAAKLHLEAAEREEQQNRQKQEVARQLAMAQ 854

Query: 843 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 879
           EA+RKA+E++K  +EKRK E+E +R+ +QE HFQRVK
Sbjct: 855 EAQRKADEERKLQIEKRKREEEHRRVMEQELHFQRVK 891


>gi|414585833|tpg|DAA36404.1| TPA: hypothetical protein ZEAMMB73_637393 [Zea mays]
          Length = 892

 Score = 1127 bits (2914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/884 (63%), Positives = 716/884 (80%), Gaps = 25/884 (2%)

Query: 133  YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
            Y +SL+ YK+AL+V+ +CP A+RLGI  CRYKLGQ+ KARQAFQR L+LDP+NV+ALVAL
Sbjct: 15   YRNSLDLYKKALRVYCNCPAAVRLGIAFCRYKLGQVEKARQAFQRVLELDPQNVDALVAL 74

Query: 193  AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
            A+MDLQ NEA GIR+GMEKM++AFEIYPY  +ALN+LANH+FFTGQHF+VEQLTETAL+ 
Sbjct: 75   AIMDLQTNEAGGIRRGMEKMKKAFEIYPYYTLALNHLANHYFFTGQHFVVEQLTETALSS 134

Query: 253  TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
            +NHG  KSH+YYNLARSYHSKGD E AG YYMASV EI+KP +F+ PY GLGQ+QLK GD
Sbjct: 135  SNHGLLKSHAYYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPYIGLGQIQLKFGD 194

Query: 313  FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
            F+S+L +FEKVLE++P+NCE+LKA+GHI+ + G+ EKA E  +K  +IDP+D QAF++LG
Sbjct: 195  FKSSLGSFEKVLEVHPENCESLKAIGHIHAKSGETEKAIETFKKVTRIDPKDHQAFVELG 254

Query: 373  ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 432
            ELL+ SD  AA++  KTAR LLKKAGE VP+E+LN IG++HFEKGEFE A QSFK+ALGD
Sbjct: 255  ELLVESDWAAAMEYLKTARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQSFKEALGD 314

Query: 433  GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 492
            G+W++++D K  + +I+ S   +Q KD   FH+ E  G  +EL  NKVT LFN ARLLE+
Sbjct: 315  GLWVSIMDGKVGSSMINWS---VQNKDQSFFHQLE--GVPLELHSNKVTTLFNYARLLEE 369

Query: 493  IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 552
            +HD+V AS+ YR I+FKY DY+DAYLRLAAIAK RNN+QLSIEL+ +ALK++ K PNALS
Sbjct: 370  LHDSVRASIFYRFIIFKYPDYIDAYLRLAAIAKQRNNVQLSIELIGDALKIDEKNPNALS 429

Query: 553  MLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 611
            MLG LEL++D+ W+ AKE FR A +AT G D+Y+ L LGNWNYFAA R EK+APK+EATH
Sbjct: 430  MLGSLELQSDEAWLTAKEHFRNAKEATKG-DTYSLLQLGNWNYFAANRPEKKAPKIEATH 488

Query: 612  LEKAKELY-TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 670
             EKA ELY T+V+ QH SN++AANG G++ AEK ++DV+K+LFTQV EAASGS+FV MPD
Sbjct: 489  REKAMELYQTQVLKQHRSNMFAANGIGILYAEKAKWDVAKELFTQVHEAASGSIFVHMPD 548

Query: 671  VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 730
            VWINLAH YFAQG+F  A+K+YQNCLRKF++NTDA ILLYLARTHYEAE+WQDC+K+LLR
Sbjct: 549  VWINLAHTYFAQGHFQQAVKLYQNCLRKFFHNTDATILLYLARTHYEAERWQDCRKTLLR 608

Query: 731  AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 790
            AIHLAPSNY LRF+ GV+MQKFSASTLQKT++T DEVR+TV EL+NA+RVFS LS AS  
Sbjct: 609  AIHLAPSNYLLRFNVGVSMQKFSASTLQKTKQTVDEVRATVTELQNAIRVFSLLSVASTY 668

Query: 791  HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEE 850
            H HGFDE+KI THVEYCKHLLDAAK+HR+AAE+ EQQN+Q+ E ARQ ALAEEARR+AEE
Sbjct: 669  HSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQQNKQKMEVARQIALAEEARRRAEE 728

Query: 851  QKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSS--TPASKRRERSENDDDEVGHSEKR 908
            Q+K+ LE+R+ EDE K+++QQEEHFQRVKEQW++S  TP  KR++RS+ +D+EVG+ ++R
Sbjct: 729  QRKFQLERRREEDELKQVKQQEEHFQRVKEQWKTSSNTPG-KRKDRSKTEDEEVGNKKRR 787

Query: 909  RRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEEN 968
            R+   ++ +K K      E E        Y++EPE +D   +Y + + + N  D+  E  
Sbjct: 788  RKGIRRKDQKTKMQYGEEEDE--------YKDEPEADD---DYAD-LARYNGADNS-ERA 834

Query: 969  ANDRLAAAGLEDSDVDDEMA-PSITAARRRRALSESDDDEPFER 1011
             +  LAAAGL+DSD +D+M  P     R+RRA SES+DDEP ++
Sbjct: 835  PDHLLAAAGLDDSDAEDDMGHPQSAIERKRRAWSESEDDEPVKK 878



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTW-VGKGQLLLAKGEVEQASSAFKIV 109
           +G+ E + ++  EH+  +   Y KA R+  + P+   +G        G+VE+A  AF+ V
Sbjct: 1   MGEAEQQHKKSLEHYRNSLDLYKKALRVYCNCPAAVRLGIAFCRYKLGQVEKARQAFQRV 60

Query: 110 LEADRDNVPALLGQACVEFNR---GRYSDSLEFYKRALQVHP 148
           LE D  NV AL+  A ++      G     +E  K+A +++P
Sbjct: 61  LELDPQNVDALVALAIMDLQTNEAGGIRRGMEKMKKAFEIYP 102


>gi|168008775|ref|XP_001757082.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
 gi|162691953|gb|EDQ78313.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
          Length = 999

 Score = 1125 bits (2910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/886 (61%), Positives = 681/886 (76%), Gaps = 27/886 (3%)

Query: 3   REYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKE 62
           REYFKQGKV +F QILEEGSSPEIDEYY+DV+Y+RIAILNALG YYT LG++E+KQREK+
Sbjct: 48  REYFKQGKVAEFLQILEEGSSPEIDEYYSDVKYDRIAILNALGAYYTNLGRVESKQREKD 107

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           EHFI ATQYYNKASRID  E STWVGKGQLL+AKGE+EQA   FKIVL+  RDNV ALLG
Sbjct: 108 EHFIRATQYYNKASRIDQDEASTWVGKGQLLVAKGELEQAQEVFKIVLDGQRDNVAALLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           QACV+FN GR+ ++L+ YK+ALQ+HP CP +                    AF R LQLD
Sbjct: 168 QACVQFNSGRFQEALKLYKKALQIHPQCPAS--------------------AFDRVLQLD 207

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
             NVEALV   ++DL + +   ++ G+EKM  AFEIYPYC+MALN+LA H+FF  QH +V
Sbjct: 208 GNNVEALVGSGIIDLNSGDENRVQAGLEKMLAAFEIYPYCSMALNHLACHYFFLDQHPMV 267

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           EQLTE ALA T+H   K+ SYYNLARSYH++ DY+ A  YY AS  E+  P +FI PYYG
Sbjct: 268 EQLTEAALAATDHVLIKAQSYYNLARSYHTREDYDMAARYYRASTAELKNPKDFILPYYG 327

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LGQV LKLGD+++AL +FEKVLE+YPDNCETLKA+GHI    G+ EKA E  +KA +++P
Sbjct: 328 LGQVHLKLGDWKAALASFEKVLELYPDNCETLKAVGHILGHQGRKEKALEHFKKATRMNP 387

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
           +D  A++++GELL+SSD  AALD+F+TA TLLK++ E VP+ +LNNIGV+HFEK E ESA
Sbjct: 388 KDVDAWLEMGELLVSSDFAAALDSFQTAHTLLKRSQEVVPLALLNNIGVLHFEKDELESA 447

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
            +++K ALG+GIW    +       +D S      +D +LF   E+ G  +++P  KVTV
Sbjct: 448 RKAYKQALGEGIWTEYSEGHRS---VDVSP----IEDNELFRSLEDKGISLDIPAEKVTV 500

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           LFNLARL EQ+H+T  ASVLYRLIL+K+ +Y DAYLRL A++ AR+N+  S+ELVN+AL+
Sbjct: 501 LFNLARLHEQLHETGKASVLYRLILYKHPEYEDAYLRLGALSLARSNISTSLELVNKALE 560

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 602
            N K   ALS+ G+LE+K DDW+KAK+TF++  +  DG D+YA L+LGNWNY+AA R EK
Sbjct: 561 ANDKNVEALSVRGNLEVKTDDWLKAKDTFKSILEIKDGNDNYAMLALGNWNYYAATRGEK 620

Query: 603 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 662
           + PKLEATHLEKA++LY +V+    +N+YAANG GVVLAEKG FD+SKD+FTQVQEAA+G
Sbjct: 621 KVPKLEATHLEKARDLYQKVLGLQINNMYAANGIGVVLAEKGLFDISKDIFTQVQEAATG 680

Query: 663 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 722
           ++ V MPDVWINL H+Y AQG F LA+KMY NCL++FY+NTD QILLYLAR HYEAEQWQ
Sbjct: 681 NLAVDMPDVWINLGHIYLAQGQFGLAVKMYLNCLKRFYHNTDHQILLYLARCHYEAEQWQ 740

Query: 723 DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFS 782
           +CK+ LLRAIHLAPSNY LRFD  +AMQKFS +TLQK +RTADEVR  V EL+NA+R+F 
Sbjct: 741 ECKRVLLRAIHLAPSNYMLRFDVAIAMQKFSTATLQKAKRTADEVRQAVFELKNALRLFG 800

Query: 783 HLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAE 842
            L+   +  +HGFDEKK++ H EYCKHLLDAAK+H EAAEREEQQ RQ+QE ARQ A+A+
Sbjct: 801 QLAGVKDKQVHGFDEKKLDMHGEYCKHLLDAAKVHLEAAEREEQQLRQKQEVARQLAMAQ 860

Query: 843 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPA 888
           EARRKAEE+++  LEKR+ + EQ+   Q E+  Q+ K  W   T A
Sbjct: 861 EARRKAEEERRLQLEKRRRDAEQRIALQLEDKLQQTKALWNKKTHA 906


>gi|218199588|gb|EEC82015.1| hypothetical protein OsI_25970 [Oryza sativa Indica Group]
          Length = 1174

 Score = 1090 bits (2818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 553/933 (59%), Positives = 704/933 (75%), Gaps = 58/933 (6%)

Query: 133  YSDSLEFYKRALQVHPSCPGAIRLGIG-LCRYKLGQLGKARQAFQRAL------------ 179
            + ++ + Y RA ++  + P +  +G G LC  K   L  A  +F+  L            
Sbjct: 259  FKEATQCYNRASRIDETEP-STWIGRGQLCVVK-HDLQMASDSFKIVLDEDGSNFPALLG 316

Query: 180  QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            QLDPEN++ALVALA+MDLQ NEA GIR+GMEKM+RAFEIYPYC +ALN+LANH+FFTGQH
Sbjct: 317  QLDPENIDALVALAIMDLQTNEAGGIRRGMEKMRRAFEIYPYCTLALNHLANHYFFTGQH 376

Query: 240  FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
            F+VEQLTETAL+ +NHG  KSH++YNLARSYHSKGD E AG YYMASV EI+KP +F+ P
Sbjct: 377  FVVEQLTETALSSSNHGLLKSHAFYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLP 436

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
            ++GLGQ+QLK  D++S+L +FEKVLE++P+NCE+LKA+GHIY + G+ +KA E  +K  +
Sbjct: 437  FFGLGQIQLKFADYKSSLASFEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFKKVTR 496

Query: 360  IDPRDAQAFIDLGELLISSDTGAALDAFKT-----------------------ARTLLKK 396
            IDP+D QAF++LGELL+ SD   A++  KT                       AR LLKK
Sbjct: 497  IDPKDHQAFMELGELLVQSDWATAMEYLKTVRLFTSLEVYSVSLYQILPWISQARNLLKK 556

Query: 397  AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
            +GE++PIE+LN IG++HFEKGE E A QSFK+ALGDG W++++D    + V++ S   +Q
Sbjct: 557  SGEKIPIELLNGIGLLHFEKGELEMAEQSFKEALGDGFWVSIIDGSVGSSVVNWS---IQ 613

Query: 457  FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 516
            ++D   F + E +G  +ELPW+KVT LFN ARL E++HDTV AS+ YRLI+FKY DY+D 
Sbjct: 614  YRDQSFFQQLEEEGTPLELPWDKVTTLFNYARLFEELHDTVKASLFYRLIIFKYPDYIDT 673

Query: 517  YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAKETFRAAS 575
            YLRLAAIAK +NNLQLSIEL+ +ALK++ KYPNALSMLG LEL+ D+ W+ AKE FR A 
Sbjct: 674  YLRLAAIAKEKNNLQLSIELIGDALKIDDKYPNALSMLGSLELQGDETWLTAKEHFREAK 733

Query: 576  DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 635
            DA++GKD+Y+ L LGNWNYFAA R EK+APK EATH EKAKELY+ V+ QH  N++AANG
Sbjct: 734  DASEGKDTYSMLQLGNWNYFAANRPEKKAPKFEATHREKAKELYSNVLKQHRGNMFAANG 793

Query: 636  AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 695
             G++ AEK Q+D++K+LFTQV EAASGS+FVQMPDVWINLAH+YFAQG F  A+KMYQNC
Sbjct: 794  IGILYAEKAQWDIAKELFTQVHEAASGSIFVQMPDVWINLAHIYFAQGFFQQAVKMYQNC 853

Query: 696  LRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAS 755
            LRKF+YNTDA ILLYLARTHYEAEQWQDC+K+LLRAIHLAPSNY LRF+ GV+MQKFSAS
Sbjct: 854  LRKFFYNTDATILLYLARTHYEAEQWQDCRKTLLRAIHLAPSNYLLRFNVGVSMQKFSAS 913

Query: 756  TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAK 815
            TLQKT+RT DEVR+TV+EL+NA+RVFS LS AS  H HGFDE+KI TH+EYCKHLLDAAK
Sbjct: 914  TLQKTKRTVDEVRATVSELQNAIRVFSLLSVASTYHSHGFDERKIETHIEYCKHLLDAAK 973

Query: 816  IHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHF 875
            +HR+AAE+ EQQN+Q+ E ARQ ALA+EARRKAEEQ+K  LE+RK EDE K++ QQE+HF
Sbjct: 974  VHRDAAEQAEQQNKQKMEVARQIALADEARRKAEEQRKAQLERRKQEDELKQVMQQEQHF 1033

Query: 876  QRVKEQWRSS--TPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEA 933
            +RVKEQW++S  TP  KR++RS+++D+E G   ++RRK G RR+KD+ +++HY  E  + 
Sbjct: 1034 ERVKEQWKTSSNTPG-KRKDRSKHEDEEGG--SEKRRKKGGRRRKDQKTKAHYGEEEEDE 1090

Query: 934  DMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDV--DDEMAPSI 991
                   E ED+ A+        + ND  D  E      LAAAGLEDSD   DD   P  
Sbjct: 1091 YRD--EPEAEDDYAN------TARSNDGGDS-ERAPGHLLAAAGLEDSDAEEDDMGHPQS 1141

Query: 992  TAARRRRALSESDDDEPFERQLRDNTDELQDSD 1024
               R+RRA SES+DDEP +R ++ +  E   SD
Sbjct: 1142 AIERKRRAWSESEDDEPVQRPVQPSAGENDLSD 1174



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/169 (54%), Positives = 118/169 (69%), Gaps = 16/169 (9%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           + REYFKQGK++QFRQILEEGS PEIDEYYADV+YERIAILNALG ++T+LGK+E  Q +
Sbjct: 196 IAREYFKQGKIDQFRQILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVERAQ-Q 254

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           KE HF  ATQ YN+ASRID  EPSTW+G+GQL + K +++ AS +FKIVL+ D  N PAL
Sbjct: 255 KEVHFKEATQCYNRASRIDETEPSTWIGRGQLCVVKHDLQMASDSFKIVLDEDGSNFPAL 314

Query: 121 LGQ------------ACVEFNR---GRYSDSLEFYKRALQVHPSCPGAI 154
           LGQ            A ++      G     +E  +RA +++P C  A+
Sbjct: 315 LGQLDPENIDALVALAIMDLQTNEAGGIRRGMEKMRRAFEIYPYCTLAL 363



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 162/417 (38%), Gaps = 72/417 (17%)

Query: 307 QLKLGDFRSAL--TNFEKVLEIYPD----NCETLKALGHIYVQLGQIEKAQ--------- 351
           Q K+  FR  L   +  ++ E Y D        L ALG  +  LG++E+AQ         
Sbjct: 203 QGKIDQFRQILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVERAQQKEVHFKEA 262

Query: 352 -ELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVP------- 402
            +   +A++ID  +   +I  G+L ++  D   A D+FK    +L + G   P       
Sbjct: 263 TQCYNRASRIDETEPSTWIGRGQLCVVKHDLQMASDSFK---IVLDEDGSNFPALLGQLD 319

Query: 403 ---IEVLNNIGVIHF---EKGEFESAHQSFKDALGDGIWLTL-LDSKTKTYVIDASASML 455
              I+ L  + ++     E G      +  + A     + TL L+     Y       ++
Sbjct: 320 PENIDALVALAIMDLQTNEAGGIRRGMEKMRRAFEIYPYCTLALNHLANHYFFTGQHFVV 379

Query: 456 QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLI---LFKYQD 512
           +    QL     +  NH  L   K    +NLAR      D   A   Y      + K QD
Sbjct: 380 E----QLTETALSSSNHGLL---KSHAFYNLARSYHSKGDIETAGRYYMASVNEISKPQD 432

Query: 513 YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           +V  +  L  I     + + S+    + L+V+ +   +L  +G +  K+ +  KA ETF+
Sbjct: 433 FVLPFFGLGQIQLKFADYKSSLASFEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFK 492

Query: 573 AASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE---ATHLEKAKELYTRVIVQHTSN 629
             +   D KD  A + LG       L     A  +E      L  + E+Y+  + Q    
Sbjct: 493 KVT-RIDPKDHQAFMELGE-----LLVQSDWATAMEYLKTVRLFTSLEVYSVSLYQILPW 546

Query: 630 LYAA----------------NGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 670
           +  A                NG G++  EKG+ ++++  F   +EA     +V + D
Sbjct: 547 ISQARNLLKKSGEKIPIELLNGIGLLHFEKGELEMAEQSF---KEALGDGFWVSIID 600


>gi|115472053|ref|NP_001059625.1| Os07g0476200 [Oryza sativa Japonica Group]
 gi|113611161|dbj|BAF21539.1| Os07g0476200, partial [Oryza sativa Japonica Group]
          Length = 629

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/640 (62%), Positives = 500/640 (78%), Gaps = 20/640 (3%)

Query: 390  ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 449
            AR LLKKAGE++PIE+LN IG++HFEKGE E A QSFK+ALGDG W++++D    + V++
Sbjct: 5    ARNLLKKAGEKIPIELLNGIGLLHFEKGELEMAEQSFKEALGDGFWVSIIDGSVGSSVVN 64

Query: 450  ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 509
             S   +Q++D   F + E +G  +ELPW+KVT LFN ARL E++HDTV AS+ YRLI+FK
Sbjct: 65   WS---IQYRDQSFFQQLEEEGTPLELPWDKVTTLFNYARLFEELHDTVKASLFYRLIIFK 121

Query: 510  YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAK 568
            Y DY+D YLRLAAIAK +NNLQLSIEL+ +ALK++ KYPNALSMLG LEL+ D+ W+ AK
Sbjct: 122  YPDYIDTYLRLAAIAKEKNNLQLSIELIGDALKIDDKYPNALSMLGSLELQGDETWLTAK 181

Query: 569  ETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTS 628
            E FR A DA++GKD+Y+ L LGNWNYFAA R EK+APK EATH EKAKELY+ V+ QH  
Sbjct: 182  EHFREAKDASEGKDTYSMLQLGNWNYFAANRPEKKAPKFEATHREKAKELYSNVLKQHHG 241

Query: 629  NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 688
            N++AANG G++ AEK Q+D++K+LFTQV EAASGS+FVQMPDVWINLAH+YFAQG F  A
Sbjct: 242  NMFAANGIGILYAEKAQWDIAKELFTQVHEAASGSIFVQMPDVWINLAHIYFAQGFFQQA 301

Query: 689  MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVA 748
            +KMYQNCLRKF+YNTDA ILLYLARTHYEAEQWQDC+K+LLRAIHLAPSNY LRF+ GV+
Sbjct: 302  VKMYQNCLRKFFYNTDATILLYLARTHYEAEQWQDCRKTLLRAIHLAPSNYLLRFNVGVS 361

Query: 749  MQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCK 808
            MQKFSASTLQKT+RT DEVR+TV+EL+NA+RVFS LS AS  H HGFDE+KI TH+EYCK
Sbjct: 362  MQKFSASTLQKTKRTVDEVRATVSELQNAIRVFSLLSVASTYHSHGFDERKIETHIEYCK 421

Query: 809  HLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRL 868
            HLLDAAK+HR+AAE+ EQQN+Q+ E ARQ ALA+EARRKAEEQ+K  LE+RK EDE K++
Sbjct: 422  HLLDAAKVHRDAAEQAEQQNKQKMEVARQIALADEARRKAEEQRKAQLERRKQEDELKQV 481

Query: 869  RQQEEHFQRVKEQWRSS--TPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHY 926
             QQE+HF+RVKEQW++S  TP  KR++RS+++D+E     ++RRK G RR+KD+ +++HY
Sbjct: 482  MQQEQHFERVKEQWKTSSNTPG-KRKDRSKHEDEEG--GGEKRRKKGGRRRKDQKTKAHY 538

Query: 927  ETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDV--D 984
              E  +        E ED+ A+        + ND   D E+     LAAAGLEDSD   D
Sbjct: 539  GEEEEDEYRD--EPEAEDDYAN------TARSND-GGDSEKAPGHLLAAAGLEDSDAEED 589

Query: 985  DEMAPSITAARRRRALSESDDDEPFERQLRDNTDELQDSD 1024
            D   P     R+RRA SES+DDEP +R ++ +  E   SD
Sbjct: 590  DMGHPQSAIERKRRAWSESEDDEPVQRPVQPSAGENDLSD 629


>gi|440789755|gb|ELR11054.1| tetratricopeptide repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 1211

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 331/928 (35%), Positives = 529/928 (57%), Gaps = 95/928 (10%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YAD--VRYERIAILNALGVYYTYLGKIETKQR 59
           EY+KQG  E F+ IL+EGS   ++    Y D   + +RIAILN L  YY  L  +++K  
Sbjct: 87  EYYKQGMPENFKLILDEGSDESLEHVPRYMDEESKRQRIAILNVLAGYYIKLA-VKSKDA 145

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           ++++ + LAT  YNKA +ID+ +  TWVGKG LLL KG  ++A   F  VL+ +  N PA
Sbjct: 146 QRDQFYDLATNNYNKADKIDVQQEMTWVGKGVLLLCKGSADRADKYFDTVLDGNAANAPA 205

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           LLG+AC+ +N+  Y ++  +Y++ L+++PSCPGA+RLG+  C Y+L +L  AR+AF+R L
Sbjct: 206 LLGKACIAYNKKNYEEAFGYYRKVLELNPSCPGAVRLGLAFCHYRLNRLELARKAFERVL 265

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            L+P+NV AL ALAV++L   +   + + M  +++A++  P  +  LN+LANHFF+  ++
Sbjct: 266 VLEPDNVPALAALAVLELNTAKPKAVHRAMSLLKQAYDADPSNSFVLNHLANHFFYKKEY 325

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIF 298
                L + A   T     K+ S+++ AR+YH++ DYEKA   YY A+    +   E+  
Sbjct: 326 KKTIHLAQAAFNNTTVREIKAESFFHFARAYHAQEDYEKAFTCYYQAT----DMWPEYTL 381

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            +YGLGQ+ L  G+   A+ +FE V + YPDN ETLK L  +Y   G+ +KA    R+  
Sbjct: 382 AHYGLGQMYLAKGETAKAIASFEVVNKKYPDNYETLKILASLYAHTGKRDKAIHHFRRIT 441

Query: 359 KIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
           +  P+D +A+++LG+L+    +   AL A++ A TLL+  GE VPIE+ NN+GV+  + G
Sbjct: 442 ETHPKDTEAWVELGDLVERQKNYTEALKAYEKATTLLQAQGEPVPIELWNNVGVLRHQLG 501

Query: 418 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
             E A Q+++ AL                  ++ A+  +FK +                 
Sbjct: 502 NVEGAEQAYRLALA-----------------ESGATEEEFKALD---------------- 528

Query: 478 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
             +T L+NL RL E  H +  A+ LY+ IL ++ +YVD YLRL  +A+ + ++  + E  
Sbjct: 529 --ITTLYNLGRLYEAQHRSEQAASLYKAILKEHPNYVDCYLRLGCMARDKGHIFEASEWF 586

Query: 538 NEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAA 597
            E   +N  +P A  +LG+L L+ ++W   ++            D Y  L+LGN  Y A 
Sbjct: 587 KETFAINESHPEAWCLLGNLHLQKEEWQPGQKN-----------DPYVLLALGNIFYAAK 635

Query: 598 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
              + +A K    +L+ A + Y RV++++ +N+YAANG G++LAE+ + + +KD F +V+
Sbjct: 636 FDKKDKAEK----YLQHAMDHYWRVLLKNPANMYAANGLGIILAERNELNEAKDFFIKVR 691

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           EA +      MPDVW+NL HVY AQG F  A+KMYQNCLRKF+ N D +++L+LA+ ++E
Sbjct: 692 EATT-----TMPDVWLNLGHVYLAQGEFVNAIKMYQNCLRKFFGNKDPEVMLFLAKAYFE 746

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRT-----ADEVRSTVA 772
               Q+CK+ LL+A+ L+P+N  L F+  ++ + ++   ++K +       A E++S +A
Sbjct: 747 YGHMQECKQVLLKALRLSPNNNQLWFNLALSQEAYARQVVKKEKTEKKSLLAGEMKSALA 806

Query: 773 ELENAVRVFSHLSAASNLHLHG---FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR 829
           EL  A R F+HL+       H    F+ K+   H   C+  +   +     AE +E +  
Sbjct: 807 ELRVAERTFTHLATIPAKTPHARLNFNPKQAEKHAAKCRAYVTTLEALVAQAETDETETA 866

Query: 830 QRQEAARQAALAE-EARRKAEEQKKYLLEKRKLEDEQKRLRQQEE----HFQRVKEQW-- 882
           +++E+ RQAA  E E RRKAE     L   + +EDE+ RL++  E    H + ++  W  
Sbjct: 867 RKRESQRQAAAEEAEKRRKAE-----LERVQAIEDEKARLQRMAEDKKKHLEMLQATWAS 921

Query: 883 ------RSSTP---ASKRRERSENDDDE 901
                 R  TP   AS+R+  +  D DE
Sbjct: 922 REAPAPREPTPKKGASRRQSGAAADGDE 949


>gi|410913167|ref|XP_003970060.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Takifugu rubripes]
          Length = 1159

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 326/924 (35%), Positives = 504/924 (54%), Gaps = 72/924 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASST--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +   D  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYVYRRDKENAAQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F  +L                                  R + +G H E  
Sbjct: 465 GNLGEAKKYFLASL---------------------------------ERAKAEGEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG +  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYYREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   + ++LLYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + QDCK+ LL+A H+APS+  L F+  + +Q+ +   L+  +     V S V E
Sbjct: 726 ALFKCGKLQDCKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQ 830
           LE A R FS+LS A +     FD     +    C  LL  A+ H   A +   EE++ R 
Sbjct: 786 LELAHRYFSYLSKAGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEEKELRA 843

Query: 831 RQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWR-SSTPAS 889
           +QE  R   L  +   K +EQK+     ++LE+++K L Q+  + ++ K     +  P  
Sbjct: 844 KQEQERD--LLRQQLLKEQEQKR----NKELEEQKKLLEQRAMYVEKTKNLLSFADVPKE 897

Query: 890 KRRERSENDDDEVGHSEKRRRKGG 913
             ++R +      G S  RR+KGG
Sbjct: 898 MAKDRKK------GSSGGRRKKGG 915


>gi|296217556|ref|XP_002755094.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Callithrix jacchus]
          Length = 1173

 Score =  511 bits (1315), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARREKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|403254243|ref|XP_003919885.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Saimiri
           boliviensis boliviensis]
          Length = 1173

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARREKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|134133313|ref|NP_001077052.1| RNA polymerase-associated protein CTR9 homolog [Danio rerio]
 gi|126635345|dbj|BAF48400.1| RNA polymerase-associated protein Ctr9 homolog [Danio rerio]
          Length = 1160

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 317/876 (36%), Positives = 488/876 (55%), Gaps = 67/876 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    +T  Y  A +I M++ +  +G+    L +G+ ++QA + F+ VL    +N+PAL
Sbjct: 107 KDLINQSTLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFQFVLNQSTNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASST--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +   D  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+E L+K 
Sbjct: 345 FGLGQMYVYRRDKENAAQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKEHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
                 D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TVQYSDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F  +L                                  R + +G H E  
Sbjct: 465 GNLGEAKKYFLASL---------------------------------ERAKAEGEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+   + NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +     ++ DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   + ++LLYLAR
Sbjct: 671 AQVREATA-----EISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LLRA H+AP++  L F+  + +Q+ +   L+  +     V S V E
Sbjct: 726 ALFKCGKLQECKQTLLRARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQ 830
           LE A R FS+LS + +     FD     +    C  LL  A+ H   A +   EE+++R 
Sbjct: 786 LELAHRYFSYLSKSGD--KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKEHRA 843

Query: 831 RQEAA----RQAALAEEARRK---AEEQKKYLLEKR 859
           +QE      RQ  + E+  RK   AEEQKK LLE+R
Sbjct: 844 KQEQERDLLRQQIMKEQEERKSREAEEQKK-LLEQR 878


>gi|260827198|ref|XP_002608552.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
 gi|229293903|gb|EEN64562.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
          Length = 1183

 Score =  507 bits (1306), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 322/946 (34%), Positives = 517/946 (54%), Gaps = 79/946 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+KQGK + F +ILE   + + +  Y +   +++  L+ L  YY    + E  +  K+E
Sbjct: 54  EYYKQGKAQDFVKILEAART-DANHDYRNHEIDQMKSLDTLAAYYVQQARKEKNKDRKKE 112

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG
Sbjct: 113 LFTQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFNFVLNQSPNNIPALLG 172

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  Y  +L +YK+AL+ +P+CP  +RLG+G C  KL +  KAR AFQRAL+L+
Sbjct: 173 KACISFNKKDYRGALAYYKKALRTNPNCPAEVRLGMGHCFMKLSKADKARLAFQRALELN 232

Query: 183 PENVEALVALAVMDLQANE-AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           P+ V ALV LA+++L + E    I++G++ + +A+ I     M LN+LANHFFF   +  
Sbjct: 233 PKCVGALVGLAILELNSKEDKESIKRGVQYLSKAYTIDSTNPMVLNHLANHFFFKKDYNK 292

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
           V+ L   A   T     ++ S Y LARS+H +GDY++A  YY  + +  +   +F+ P +
Sbjct: 293 VQHLALHAFHGTEVEAIQAESCYQLARSFHVQGDYDQAFQYYYQATQFAST--QFVLPQF 350

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAA 358
           GLGQ+ +  GD  +A   FEKVL+ +P+N ET+K LG +Y Q    EK   A++ L+K  
Sbjct: 351 GLGQMYIYRGDNENAAQCFEKVLKHFPNNYETMKILGSLYAQSSDQEKRDIAKQHLKKVT 410

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKG 417
           +  P D +A+I+L ++L  SD   AL A+ TA  +LK K   +VP E+LNN+G +HF  G
Sbjct: 411 EQFPDDVEAWIELAQILEQSDIQGALQAYGTATRILKEKVQADVPPEILNNVGALHFRLG 470

Query: 418 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
             + A                     K YV                 R + +  H E  +
Sbjct: 471 NLQEA--------------------KKYYVAS-------------LDRSKQEAQHDETYY 497

Query: 478 NKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
           + ++V   +NLARL E +     A  LY+ +L ++ +YVD YLRL  +A+ R  +  + +
Sbjct: 498 SAISVTTSYNLARLFEALCMYQDAERLYKEVLREHPNYVDCYLRLGCMARDRGQIYEASD 557

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNY 594
              EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +
Sbjct: 558 WFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKHPDTASDAYSMLALGNV-W 616

Query: 595 FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 654
              L   +R  + E  H ++A  +Y +V+     NLYAANG G VLA+K     ++D+F 
Sbjct: 617 LQTLHQPQRDKEKEKRHQDRALAMYKQVLRNDPKNLYAANGIGAVLAQKNCIREARDVFA 676

Query: 655 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART 714
           QV+EA +      M DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   D  +LLYLAR 
Sbjct: 677 QVREATA-----DMRDVWLNLAHIYVEQRQYVSAIQMYENCLKKFYKCQDTDVLLYLARA 731

Query: 715 HYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAEL 774
           +Y+  + ++C++ LL+A H++P +  L ++  + MQK + S L+  +     V   V EL
Sbjct: 732 YYKLGKHKECRQILLKARHVSPHDTVLLYNMSLVMQKMATSVLKDEKSNLKTVLGAVREL 791

Query: 775 ENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR----- 829
           E A R F++LS   +     FD K+       C  LL  A+ H   A R++++ R     
Sbjct: 792 ELAHRYFNYLSREGDRMR--FDLKQAELEARQCSDLLSQAQYHVARARRQDEEEREVRMR 849

Query: 830 --QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTP 887
             Q +EA RQ  L EE R+K EE+++   + R+LE+++++   + ++   + ++      
Sbjct: 850 QEQEREALRQKQL-EEQRKKTEEREQ---QARELEEKRRQYLDKTKNLLVLPDEPPDEPK 905

Query: 888 ASKRR------------ERSENDDDEVGHSEKRRRKGG---KRRKK 918
           A K+               + +DDD +   +K R KGG    R+KK
Sbjct: 906 ARKKGGGGRVSLVLLHYSETVDDDDGMPVRKKSRSKGGLGVPRKKK 951


>gi|348559886|ref|XP_003465746.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cavia
           porcellus]
          Length = 1173

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRSFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|359322331|ref|XP_003639833.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Canis
           lupus familiaris]
          Length = 1173

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|147905822|ref|NP_001086446.1| RNA polymerase-associated protein CTR9 homolog [Xenopus laevis]
 gi|82249387|sp|Q4QR29.1|CTR9_XENLA RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|67677972|gb|AAH97638.1| LOC446236 protein [Xenopus laevis]
          Length = 1157

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 324/926 (34%), Positives = 504/926 (54%), Gaps = 71/926 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EYFKQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYFKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL 
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAGVRLGMGHCFVKLNKLDKARLAFGRALD 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+P  V ALV LAV++L   EA  I+ G++ + +A+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNPTCVGALVGLAVLELNNKEADSIKNGVQLLSKAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +       F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQ--FAAASFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKSHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQNALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   +  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNSISVTTSYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+   + NL+AANG G VLA KG    ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLFAANGIGAVLAHKGYVREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK+ LL+A H+AP++  L F+  + +Q+ +   L+  +     V + V E
Sbjct: 726 ALFKCGKLQECKQILLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 833
           LE A R F++LS   +     FD     +    C  LL  A+ H   A +++++ +    
Sbjct: 786 LELAHRYFNYLSKVGDKMR--FDLALATSEARQCSDLLSQAQYHVARARKQDEEEK---- 839

Query: 834 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRE 893
                    E R K E++K+ L +K   E E+K LR+ EE  +++ EQ R+      R  
Sbjct: 840 ---------EMRTKQEQEKEVLRQKLLKEQEEKHLREIEEQ-KKLLEQ-RAQYLEKTRNL 888

Query: 894 RSENDDDEVGHSEKRRRKGGKRRKKD 919
            S   + E    +K+R  GG+R KK+
Sbjct: 889 LSFTGEMETPKEKKQRGGGGRRSKKN 914


>gi|397494694|ref|XP_003818208.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Pan
           paniscus]
 gi|410226238|gb|JAA10338.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Pan
           troglodytes]
 gi|410259852|gb|JAA17892.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Pan
           troglodytes]
 gi|410291668|gb|JAA24434.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Pan
           troglodytes]
 gi|410334835|gb|JAA36364.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Pan
           troglodytes]
          Length = 1173

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|332211777|ref|XP_003254990.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nomascus
           leucogenys]
          Length = 1173

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|291190510|ref|NP_001167125.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar]
 gi|223648266|gb|ACN10891.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar]
          Length = 1158

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 315/877 (35%), Positives = 485/877 (55%), Gaps = 65/877 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQTKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L + E   I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASST--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +   D  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYVYRRDKENAAQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +G H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEGEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+   + NLYAANG G VLA KG +  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYYREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCL+KFY + + ++LLYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ +   L+  +     V S V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQ 830
           LE A R FS+L+ A +     FD    +T    C  LL  A+ H   A +   EE++ R 
Sbjct: 786 LELAHRYFSYLAKAGDKMR--FDLVLASTEARQCSDLLSQAQYHVARARKQDEEEKEIRA 843

Query: 831 RQEAAR------QAALAEEARRKAEEQKKYLLEKRKL 861
           +Q+  R           EE R K EE +K LLE+R +
Sbjct: 844 KQDQERDFLRQQMHKEQEEKRTKQEEDQKKLLEQRAM 880


>gi|7661950|ref|NP_055448.1| RNA polymerase-associated protein CTR9 homolog [Homo sapiens]
 gi|74758318|sp|Q6PD62.1|CTR9_HUMAN RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|37590626|gb|AAH58914.1| Ctr9, Paf1/RNA polymerase II complex component, homolog (S.
           cerevisiae) [Homo sapiens]
 gi|119588963|gb|EAW68557.1| SH2 domain binding protein 1 (tetratricopeptide repeat containing),
           isoform CRA_a [Homo sapiens]
 gi|119588964|gb|EAW68558.1| SH2 domain binding protein 1 (tetratricopeptide repeat containing),
           isoform CRA_a [Homo sapiens]
 gi|168274418|dbj|BAG09629.1| RNA polymerase-associated protein CTR9 homolog [synthetic
           construct]
          Length = 1173

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|350580297|ref|XP_003353998.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Sus
           scrofa]
          Length = 1171

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|355681626|gb|AER96805.1| Ctr9, Paf1/RNA polymerase II complex component,-like protein
           [Mustela putorius furo]
          Length = 1172

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|355566722|gb|EHH23101.1| SH2 domain-binding protein 1 [Macaca mulatta]
 gi|355752325|gb|EHH56445.1| SH2 domain-binding protein 1 [Macaca fascicularis]
 gi|380818264|gb|AFE81006.1| RNA polymerase-associated protein CTR9 homolog [Macaca mulatta]
 gi|383423099|gb|AFH34763.1| RNA polymerase-associated protein CTR9 homolog [Macaca mulatta]
          Length = 1173

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|402894228|ref|XP_003910271.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Papio
           anubis]
          Length = 1173

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|40788884|dbj|BAA09925.2| KIAA0155 [Homo sapiens]
          Length = 1195

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 72  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 128

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 129 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 188

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 189 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 248

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 249 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 308

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 309 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 366

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 367 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 426

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 427 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 486

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 487 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 513

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 514 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 573

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 574 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 632

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 633 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 692

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 693 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 747

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 748 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 807

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 808 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 865

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 866 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 900


>gi|291384637|ref|XP_002708860.1| PREDICTED: SH2 domain binding protein 1 [Oryctolagus cuniculus]
          Length = 1173

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|351705109|gb|EHB08028.1| RNA polymerase-associated protein CTR9-like protein [Heterocephalus
           glaber]
          Length = 1179

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRSFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|326919998|ref|XP_003206263.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Meleagris gallopavo]
          Length = 1167

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 318/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYG 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|363734664|ref|XP_420968.3| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Gallus
           gallus]
          Length = 1167

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 318/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYG 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|395815258|ref|XP_003781150.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Otolemur
           garnettii]
          Length = 1173

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|194213841|ref|XP_001918026.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Equus
           caballus]
          Length = 1162

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 39  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 95

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 96  KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 155

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 156 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 215

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 216 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 275

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 276 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPF 333

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 334 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 393

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 394 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 453

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 454 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 480

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 481 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 540

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 541 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 599

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 600 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 659

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 660 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 714

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 715 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 774

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 775 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 832

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 833 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 867


>gi|297689266|ref|XP_002822077.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Pongo
           abelii]
          Length = 1173

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|297268403|ref|XP_001094093.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Macaca
            mulatta]
          Length = 1298

 Score =  504 bits (1298), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4    EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
            EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 175  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 231

Query: 62   EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 232  KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 291

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 292  LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 351

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 352  LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 411

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
             V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 412  KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 469

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
            +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 470  FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 529

Query: 358  AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
             +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 530  TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 589

Query: 417  GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
            G    A + F         L  LD                        R + +  H E  
Sbjct: 590  GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 616

Query: 477  WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
            +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 617  YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 676

Query: 535  ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
            +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 677  DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 735

Query: 594  YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
            +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 736  WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 795

Query: 654  TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
             QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 796  AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 850

Query: 714  THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
              ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 851  ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 910

Query: 774  LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
            LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 911  LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 968

Query: 830  ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
               Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 969  KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 1003


>gi|329663840|ref|NP_001192326.1| RNA polymerase-associated protein CTR9 homolog [Bos taurus]
          Length = 1173

 Score =  504 bits (1298), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|156364414|ref|XP_001626343.1| predicted protein [Nematostella vectensis]
 gi|156213216|gb|EDO34243.1| predicted protein [Nematostella vectensis]
          Length = 1072

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 311/876 (35%), Positives = 494/876 (56%), Gaps = 65/876 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           +Y+KQGK E F +ILE   + + +  Y D   +++  L+ L  +Y    + E  + +K+E
Sbjct: 49  QYYKQGKTEDFIRILESART-DANRKYGDSEKDQMVCLDTLAAFYVQQARKEKNKEKKKE 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+PALLG
Sbjct: 108 LFTQATSLYTMADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLAQSGNNIPALLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  Y ++L FYK+AL+ +P+CPGA+RLG+G C  KL +L KAR AF+RAL+L+
Sbjct: 168 KACIFFNKRDYKNALAFYKKALRTNPNCPGAVRLGMGHCFVKLNKLDKARLAFKRALELE 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P    A+V LA+++L + +   I+ G++ + +A+ I     M LN+LANHFFF   +  V
Sbjct: 228 PRCTGAMVGLAILELNSKKPDSIKIGVQLLSKAYTIDNSNPMVLNHLANHFFFKKDYSKV 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   A   T     ++ S Y LAR++H +GD+++A  YY  +  +   P+ FI P++G
Sbjct: 288 QHLALHAFHGTEVEAMQAESCYQLARAFHVQGDFDQAFQYYYQAT-QFASPN-FILPHFG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY---VQLGQIEKAQELLRKAAK 359
           LGQ+ +   D  +A   FEKVL+  P N ET+K LG +Y     L + E A++ L+K  +
Sbjct: 346 LGQMYIARRDLNNASQCFEKVLKAMPGNYETMKILGSLYSPSSDLVKRELARQHLKKVTE 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L  +L  SD  AAL A+ TA  LLK+  E +VP E+LNN+G +HF  G 
Sbjct: 406 QHPDDVEAWIELAGILEQSDVQAALQAYGTASRLLKEKVEADVPPEILNNVGALHFRLGN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A + ++ +L                           +  Q  H  E+  N +     
Sbjct: 466 LKEAKRFYESSLD--------------------------RSKQESHNDESYYNAIS---- 495

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            VT  +NLARL E + +   A  LY+ IL ++ +YVD YLRL  +A+ R  +  + +   
Sbjct: 496 -VTTTYNLARLHEAMCEIDKAEQLYKNILREHPNYVDCYLRLGCMARNRGQIYEASDWFK 554

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAA 597
           EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   
Sbjct: 555 EALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTANDAYSLLALGNV-WLQT 613

Query: 598 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
           L    R    E  H ++A  +Y +V+   + NLYAANG G +LA KG    ++D+F+QV+
Sbjct: 614 LHAPTRDKAKERRHQDRALAMYKQVLRNDSRNLYAANGIGCILAHKGYIREARDVFSQVR 673

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           EA +      +PDVW+NLAH+Y  Q  +  A++MY+NCLRKF+ +   +++LYLAR +Y 
Sbjct: 674 EATA-----DVPDVWLNLAHIYVEQKQYVSAIQMYENCLRKFFKHHSVEVMLYLARAYYR 728

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 777
           A + +DCK+ LL+A H++P++  L F+  +  QK +   L+  + +   V   V ELE A
Sbjct: 729 AGKLKDCKRVLLKARHVSPNDTILLFNVSLVQQKLATGILRAEKSSLKVVLGAVGELEQA 788

Query: 778 VRVFSHLSAASNLHLHG----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQ 830
            R F+ LS       HG    FD         +   LL  A+ H   A +   +EQ+ R+
Sbjct: 789 QRNFTWLSR------HGDRMKFDLAWAAYESRHTSDLLSQAQYHVSRARKLDEQEQELRR 842

Query: 831 RQEAARQA---ALAEEAR---RKAEEQKKYLLEKRK 860
           +QEA ++A   +  EE R   ++ EEQ++ +LEKR+
Sbjct: 843 KQEAEKEALRRSKEEEERSRQKEREEQERLMLEKRQ 878


>gi|417406061|gb|JAA49707.1| Putative rna polymerase-associated protein ctr9 [Desmodus rotundus]
          Length = 1175

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 310/865 (35%), Positives = 479/865 (55%), Gaps = 69/865 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 833
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEER---- 839

Query: 834 AARQAALAEEARRKAEEQKKYLLEK 858
                    E R K E++K+ L +K
Sbjct: 840 ---------ELRAKQEQEKELLRQK 855


>gi|426244794|ref|XP_004016202.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Ovis
           aries]
          Length = 1173

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|158257020|dbj|BAF84483.1| unnamed protein product [Homo sapiens]
          Length = 1173

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 315/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV L V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLVVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|332836079|ref|XP_521841.3| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
           [Pan troglodytes]
          Length = 1215

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGD--KMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|395543506|ref|XP_003773658.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Sarcophilus harrisii]
          Length = 1156

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 37  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 93

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 94  KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 153

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 154 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 213

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 214 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 273

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 274 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 331

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      +K   A+  L+K 
Sbjct: 332 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKV 391

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 392 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 451

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 452 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 478

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 479 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 538

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 539 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 597

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 598 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVF 657

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 658 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 712

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 713 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 772

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 773 LELAHRYFSYLSKVGD--KMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 830

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 831 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 865


>gi|242018035|ref|XP_002429488.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
           corporis]
 gi|212514426|gb|EEB16750.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
           corporis]
          Length = 1217

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 320/948 (33%), Positives = 514/948 (54%), Gaps = 78/948 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+KQGK+E+F +IL+  S  + +  Y D   +++  L+ L  YY      E  + +K +
Sbjct: 55  EYYKQGKIEEFIKILD-ASRTDANIDYRDFEKDQMRALDMLAAYYVQQANKEKNKDKKRD 113

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+P+ +G
Sbjct: 114 LFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSQIG 173

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  Y  SL FYK+AL+ +P+CP A+RLG+G C  KLG L KAR AF+RALQLD
Sbjct: 174 KACIAFNKKDYRGSLAFYKKALRTNPNCPAAVRLGMGHCFVKLGNLEKARLAFERALQLD 233

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P+ V ALV LA++ L   E   IR G++ + +A+ I     M LN+LANHFFF   +  V
Sbjct: 234 PQCVGALVGLAILKLNIQEPEDIRAGVQMLSKAYTIDMSNPMVLNHLANHFFFKKDYNKV 293

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   A   T +   ++ S Y LAR++H + DY++A  YY  + +    P  F+ P+YG
Sbjct: 294 QHLALHAFHNTENEAMRAESCYQLARAFHVQADYDQAFQYYYQATQ--FAPSAFVLPHYG 351

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY---VQLGQIEKAQELLRKAAK 359
           LGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       + E A+  L+K  +
Sbjct: 352 LGQMYIYRGDSENAAQCFEKVLKAQPGNYETMKILGSLYANSTSQSKREIAKNHLKKVTE 411

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  SD   AL A+  A  +L+ K   E+P E+LNN+G +H+    
Sbjct: 412 QFPEDVEAWIELAQILEQSDVQGALSAYGMAIKILRDKVQVELPPEILNNVGALHYRLNN 471

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            E A ++F+D+L          +KT++ +           D Q ++              
Sbjct: 472 LEEAKKNFEDSLAR--------AKTESEI-----------DPQYYNSIS----------- 501

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            VT  +NLARL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + +   
Sbjct: 502 -VTTTYNLARLNESLCQYDRAEKLYKDILREHPNYVDCYLRLGCMARDKGQISEASDWFK 560

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAA 597
           +AL++N  +P+A S+LG+L L   +W   ++ F R   +++   D+Y+ ++LGN  +   
Sbjct: 561 DALQINNDHPDAWSLLGNLHLAQMEWGPGQKKFERILKNSSTSSDAYSLIALGNV-WLQT 619

Query: 598 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
           L    R  + E  H E+A  +Y +V+     N++AANG G VLA KG  + ++D+F QV+
Sbjct: 620 LHQPTRDKEREKRHQERALAMYKQVLRNDPRNIWAANGIGAVLAHKGAINEARDVFAQVR 679

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           EA +        DVW+N+AH+Y  Q  +  A++MY+NCLRKFY     ++L YLAR +++
Sbjct: 680 EATA-----DFCDVWLNIAHIYVEQKQYISAIQMYENCLRKFYKYPHVEVLQYLARAYFK 734

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 777
           A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  +
Sbjct: 735 AGKLKEAKMTLLKARRVAPQDTVLLYNIALVLQRLAMFILKDVKSTLTTVLQAVHELGLS 794

Query: 778 VRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEA 834
            + F +L+   +     +D          C+ LL  A+ H   A R   EE+Q R++QE 
Sbjct: 795 HKYFQYLAVYGD--RMKYDLALAAMEARQCQDLLSQAQYHVARARRVDEEEKQLRKKQEE 852

Query: 835 ARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEH--------FQRVKEQWRSST 886
            R+A       R+ EEQKK L E+R+ E EQ  +++QE          F  +  + +  +
Sbjct: 853 EREAFRV----RQMEEQKK-LEERRRQEAEQMLIKRQEYKEKTKNAILFTELPNEMKPKS 907

Query: 887 PASKRRERSENDD------------DEVGHSEKRR--RKGGKRRKKDK 920
               +++   + D             E   SEKR+  RKGG +R+K+K
Sbjct: 908 RGKGKKDYITDSDGSDAENEKPKEPKERKRSEKRKEGRKGGTKRRKEK 955


>gi|449501928|ref|XP_004174473.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Taeniopygia guttata]
          Length = 1168

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 317/875 (36%), Positives = 486/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYG 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LAR +H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARXFHVQEDYDQAFQYYYQATQFASSS--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGD--KMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|281604178|ref|NP_001094131.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Rattus
           norvegicus]
 gi|149068293|gb|EDM17845.1| SH2 domain binding protein 1 (tetratricopeptide repeat containing),
           isoform CRA_a [Rattus norvegicus]
          Length = 1173

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 315/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|291227751|ref|XP_002733846.1| PREDICTED: SH2 domain binding protein 1-like, partial [Saccoglossus
           kowalevskii]
          Length = 1197

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 307/906 (33%), Positives = 498/906 (54%), Gaps = 56/906 (6%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+KQG  E+F +I E  S  + +  Y D    ++  L+ L  YY    + E  +  K+E
Sbjct: 2   EYYKQGATEEFVKIFE-ASRTDANTEYKDHETHQMTALDTLAAYYVQQARKEKSKDVKKE 60

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT+ Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LLG
Sbjct: 61  LFTQATRLYTMADKIIMYDQNHLLGRACFCLFEGDKMDQADAQFNFVLNQSPNNIPSLLG 120

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  +  +L +YK+AL+  P+CP A+RLG+G C  KL +L KAR AF+RALQL+
Sbjct: 121 KACISFNKKDFRGALAYYKKALRTTPNCPAAVRLGMGHCFMKLSKLDKARLAFERALQLE 180

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P  V A+V LA+++L + E   I+KG++ + +A+ I     M LN+LANHFFF   +  V
Sbjct: 181 PSCVGAIVGLAILELNSKEPDSIKKGVQLLSKAYTIDSSNPMVLNHLANHFFFKKDYNKV 240

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   A   T +   ++ S Y LARS+H +GDY++A  YY  S +  + P  F+ P++G
Sbjct: 241 QHLALHAFHGTENEFIQAESCYQLARSFHVQGDYDQAFQYYYQSTQFASAP--FVLPFFG 298

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y      EK   A+  L+K  +
Sbjct: 299 LGQMYIYRGDMENAAQCFEKVLKSQPGNYETMKILGSLYATSPDQEKREIAKGHLQKVVE 358

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  SD   AL A+ TA  +LK K   +VP E+LNN+G +HF  G 
Sbjct: 359 QFPDDVEAWIELAQILEQSDVQGALSAYGTATRILKEKVQADVPPEILNNVGALHFRLGN 418

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + + + ++ +L                                  R +++  H E  ++
Sbjct: 419 LKESKRYYEASL---------------------------------ERSKHEAQHDETYYS 445

Query: 479 --KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
              VT  +NLARL E       A  LY+ IL ++ +YVD YLRL  +A+    +  + + 
Sbjct: 446 AISVTTTYNLARLREATCAFDKAEQLYKNILREHPNYVDCYLRLGCMARDSGQIYDASDW 505

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 595
             EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  + 
Sbjct: 506 FKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDAYSLLALGNV-WL 564

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
             L    R    E  H ++A  +Y +V+     N+YAANG G VLA+KG    ++D+F+Q
Sbjct: 565 QTLYQPTRDKDKEKRHQDRALAMYKQVLRNDGKNIYAANGIGAVLAQKGYIREARDVFSQ 624

Query: 656 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTH 715
           V+EA +      M DVW+NLAH+Y  Q  +  A++MY+NCLRKFY   + +++LYLAR +
Sbjct: 625 VREATA-----DMRDVWLNLAHIYVEQKQYISAIQMYENCLRKFYKYHNTEVMLYLARAY 679

Query: 716 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 775
           + A +  DCKK LL+A  ++P++  L ++  + MQ+ +   L+  +     V   V ELE
Sbjct: 680 FRAGKMMDCKKVLLKARRVSPNDTVLLYNIALVMQRLAMGILKDEKSNLKTVLGAVHELE 739

Query: 776 NAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQ 832
            A R F++LS A +     FD  +       C  LL  A+ H   A R   EE+  R +Q
Sbjct: 740 LAHRYFTYLSKAGDRMK--FDLNQAAVEARQCSDLLSQAQYHVARARRQDEEEKAIRAQQ 797

Query: 833 EAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRR 892
            A R A   ++   K  ++K+  ++ ++L +++++  ++ ++   + E+     P+ K R
Sbjct: 798 AAERDALRKKQLEEKIAKEKQIEVKAQELLEKRQQFVEKTKNMIMLPEE-EERKPSRKGR 856

Query: 893 ERSEND 898
           ++ + D
Sbjct: 857 KKKDGD 862


>gi|126332161|ref|XP_001367572.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Monodelphis domestica]
          Length = 1168

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      +K   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGD--KMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|354492347|ref|XP_003508310.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Cricetulus griseus]
 gi|344240896|gb|EGV96999.1| RNA polymerase-associated protein CTR9-like [Cricetulus griseus]
          Length = 1171

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 315/875 (36%), Positives = 488/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|154090953|ref|NP_033457.2| RNA polymerase-associated protein CTR9 homolog [Mus musculus]
 gi|91208163|sp|Q62018.2|CTR9_MOUSE RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1; AltName:
           Full=Tetratricopeptide repeat-containing, SH2-binding
           phosphoprotein of 150 kDa; Short=TPR-containing,
           SH2-binding phosphoprotein of 150 kDa; Short=p150TSP
 gi|148685056|gb|EDL17003.1| Ctr9, Paf1/RNA polymerase II complex component, homolog (S.
           cerevisiae), isoform CRA_c [Mus musculus]
          Length = 1173

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 315/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|1236239|gb|AAC42083.1| phosphoprotein [Mus musculus]
 gi|1589169|prf||2210338A nuclear phosphoprotein p150TSP
          Length = 1173

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 315/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G +++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDQMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|432851712|ref|XP_004067047.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Oryzias
           latipes]
          Length = 1144

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 312/877 (35%), Positives = 481/877 (54%), Gaps = 65/877 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYR 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASTT--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +   D  +A   FEKVL+ YP+N ET+K LG +Y      +K   A+  L+K 
Sbjct: 345 FGLGQMYVYRRDKENAAQCFEKVLKAYPNNYETMKILGSLYATSDDQDKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA  +L++  + +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQETVQADVPPEILNNLGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F  +L                                  R + +G H E  
Sbjct: 465 GNLGEAKKYFLASL---------------------------------ERAKAEGEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NL+AANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLHAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   + ++LLYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK+ LL+A H+APS+  L F+  + +Q+ +   L+  +     V S V E
Sbjct: 726 ALFKCGKLQECKQILLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQ 830
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +   EE++ R 
Sbjct: 786 LELAHRYFSYLSKTGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEEKELRA 843

Query: 831 RQEAAR------QAALAEEARRKAEEQKKYLLEKRKL 861
           +QE  R           EE R K  E++K LLE+R L
Sbjct: 844 KQEQERDLLRQQLLKQQEEKRNKEAEEQKKLLEQRAL 880


>gi|426367476|ref|XP_004050758.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Gorilla
           gorilla gorilla]
          Length = 1173

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 310/865 (35%), Positives = 479/865 (55%), Gaps = 69/865 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 833
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEER---- 839

Query: 834 AARQAALAEEARRKAEEQKKYLLEK 858
                    E R K E++K+ L +K
Sbjct: 840 ---------ELRAKQEQEKELLRQK 855


>gi|50417750|gb|AAH77978.1| LOC446236 protein, partial [Xenopus laevis]
          Length = 938

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 324/926 (34%), Positives = 504/926 (54%), Gaps = 71/926 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EYFKQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYFKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL 
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAGVRLGMGHCFVKLNKLDKARLAFGRALD 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+P  V ALV LAV++L   EA  I+ G++ + +A+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNPTCVGALVGLAVLELNNKEADSIKNGVQLLSKAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +       F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQ--FAAASFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKSHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQNALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   +  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNSISVTTSYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+   + NL+AANG G VLA KG    ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLFAANGIGAVLAHKGYVREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK+ LL+A H+AP++  L F+  + +Q+ +   L+  +     V + V E
Sbjct: 726 ALFKCGKLQECKQILLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 833
           LE A R F++LS   +     FD     +    C  LL  A+ H   A +++++ +    
Sbjct: 786 LELAHRYFNYLSKVGD--KMRFDLALATSEARQCSDLLSQAQYHVARARKQDEEEK---- 839

Query: 834 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRE 893
                    E R K E++K+ L +K   E E+K LR+ EE  +++ EQ R+      R  
Sbjct: 840 ---------EMRTKQEQEKEVLRQKLLKEQEEKHLREIEEQ-KKLLEQ-RAQYLEKTRNL 888

Query: 894 RSENDDDEVGHSEKRRRKGGKRRKKD 919
            S   + E    +K+R  GG+R KK+
Sbjct: 889 LSFTGEMETPKEKKQRGGGGRRSKKN 914


>gi|149631897|ref|XP_001506546.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
           [Ornithorhynchus anatinus]
          Length = 1163

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 316/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      +K   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|427776753|gb|JAA53828.1| Putative rna polymerase-associated protein ctr9 [Rhipicephalus
           pulchellus]
          Length = 1263

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 317/927 (34%), Positives = 494/927 (53%), Gaps = 79/927 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY++QGKV+ F ++LE G + E    Y D   +++  L+ L  YY      E  +  K E
Sbjct: 49  EYYRQGKVDDFVRLLEAGRT-EARLDYRDFEQDQMTCLDTLAAYYVQKASKEKNKDRKHE 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A +I M+  +  +G+    L +G+ ++QA + F  VL    +N+P+LLG
Sbjct: 108 LFTKATLLYTTADKIIMYTQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  Y  +L FYK+AL+ +P+CP  +RLG+G C Y+LG+  KAR AF+RAL LD
Sbjct: 168 KACIAFNKKDYRGALAFYKKALRTNPNCPAEVRLGMGHCLYRLGKQEKARAAFERALVLD 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P+ V AL  LAV+ L        R G++ + RA+ + P C + LN LANHFFF   +  V
Sbjct: 228 PQCVGALSGLAVLQLNQKGTEATRAGVQMLSRAYAVDPSCPVVLNQLANHFFFKKDYGKV 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   A   T +   ++ S Y LARS+H + DY++A  YY  + +    P  F+ P++G
Sbjct: 288 QHLALHAFHNTENEAMRAESCYQLARSFHVQEDYDQAFQYYYQATQ--FAPPSFVLPHFG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  L+K   
Sbjct: 346 LGQMYIFRGDVDNAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDQAKTHLKKVTD 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  SD   AL A+ TA  LL+ K   +VP E+LNN+G +HF  G 
Sbjct: 406 QFPEDVEAWIELAQILEQSDVQGALSAYGTATRLLQDKVKADVPPEILNNVGALHFRMGN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A + ++ +L                                  R   + N+ E  ++
Sbjct: 466 LQEARRFYEASL---------------------------------ERSRTEANNDEHYYS 492

Query: 479 --KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
              VT  +NLARL E +     A   Y+ IL ++ +YVD YLRL  +A+ R  +  + + 
Sbjct: 493 SISVTTTYNLARLYEALSLFDRAEQAYKNILREHPNYVDCYLRLGCMARDRGQIYEASDW 552

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFA 596
             EAL+VN ++P++ S++G+L L   +W   ++ F        G D+Y+ ++LGN  +  
Sbjct: 553 FKEALQVNQEHPDSWSLIGNLHLAKQEWGPGQKKFERILKGAQG-DAYSLVALGNV-WLQ 610

Query: 597 ALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQV 656
            L    R    E  H ++A  +Y +V+     N++AANG G VLA KG    S+D+F QV
Sbjct: 611 TLHQPIRDRDKERRHQDRALAMYKQVLRLDPRNIWAANGVGAVLAHKGYISESRDIFAQV 670

Query: 657 QEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY 716
           +EA +        DVW+N+AH+Y  Q  +  A++MY+NCLRKFY +    IL+YLAR  +
Sbjct: 671 REATA-----DFCDVWLNIAHIYVEQKQYVAAIQMYENCLRKFYRHHHVDILVYLARALF 725

Query: 717 EAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELEN 776
              + ++CK+ LLRA  +AP +  L ++  + +QK +A  L+  + +   V S V EL  
Sbjct: 726 RCNRLRECKRVLLRARRVAPQDTLLLYNIALVLQKLAAQCLRDDKSSLAVVLSAVHELGL 785

Query: 777 AVRVFSHLSAASNLHLHG----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNR 829
           A R F +LS      +HG    +D  +       C+ LL  A+ H   A R   EE++ R
Sbjct: 786 AHRYFQYLS------VHGDRMKYDLAQAAAESRQCQDLLSQAQYHVARARRMDEEEREIR 839

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWR-----S 884
           ++QE  R+A      RRK  E+++ +LE++KLE E+  + +++E  ++ K + +      
Sbjct: 840 RKQEEEREA-----LRRKISEEQR-MLEEQKLEQERAMIMKRQEFVEKSKSKMQFVDTGD 893

Query: 885 STPASKRRERSEND-----DDEVGHSE 906
             P+ K + R   D      DE G  E
Sbjct: 894 DKPSKKSKGRKTQDYVSDSSDEGGEVE 920


>gi|348509587|ref|XP_003442329.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Oreochromis niloticus]
          Length = 1158

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 305/846 (36%), Positives = 468/846 (55%), Gaps = 59/846 (6%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASST--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +   D  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYVYRRDKENAAQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F  +L                                  R + +G H E  
Sbjct: 465 GNLGEAKKYFLASL---------------------------------ERAKAEGEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +     ++ DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   + ++LLYLAR
Sbjct: 671 AQVREATA-----EISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK+ LL+A H+AP++  L F+  + +Q+ +   L+  +     V S V E
Sbjct: 726 ALFKCGKLQECKQMLLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQ 830
           LE A R FS+LS A +     FD     +    C  LL  A+ H   A +   EE++ R 
Sbjct: 786 LELAHRYFSYLSKAGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEEKELRA 843

Query: 831 RQEAAR 836
           +QE  R
Sbjct: 844 KQEQER 849


>gi|327259895|ref|XP_003214771.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Anolis carolinensis]
          Length = 1244

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 348/1068 (32%), Positives = 560/1068 (52%), Gaps = 102/1068 (9%)

Query: 4    EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
            EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 115  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 171

Query: 62   EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 172  KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 231

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 232  LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFSRALE 291

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 292  LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYG 351

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
             V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 352  KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 409

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
            +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      +K   A+  L+K 
Sbjct: 410  FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKV 469

Query: 358  AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
             +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 470  TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 529

Query: 417  GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
            G    A + F         L  LD                        R + +  H E  
Sbjct: 530  GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 556

Query: 477  WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
            +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 557  YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 616

Query: 535  ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
            +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 617  DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 675

Query: 594  YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
            +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 676  WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVF 735

Query: 654  TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
             QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR
Sbjct: 736  AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLAR 790

Query: 714  THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
              ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 791  ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 850

Query: 774  LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 833
            LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 851  LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEER---- 904

Query: 834  AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRE 893
                     E R K E++K+ L +K   E E+KRLR+ EE  + ++++       ++  E
Sbjct: 905  ---------ELRAKQEQEKELLRQKLLKEQEEKRLREIEEQKKLLEQR-------AQYVE 948

Query: 894  RSEND---DDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMN 950
            +++N      EV  S++++R G  RR +       +  + ++ D+   R++   + +   
Sbjct: 949  KTKNILMFTGEVEGSKEKKRGGAGRRSRKTGEFEEFVNDDSDDDLPVSRKKKRRKGSGSE 1008

Query: 951  Y-----------------REPIGQMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITA 993
                              ++     +D D++       R  A   +     + + PS+  
Sbjct: 1009 QDGEEEDGEKKKKKRRRAQKADDGTDDDDNEATPRPKKRRPAKTEKRKPKPERLPPSMKG 1068

Query: 994  ARRRRALSESDDDEPFERQLRDNTDELQDSDGELRENDHKSNGGAALD 1041
              + +A+  S DD   E +L+     + D DG  R ++  S+    L+
Sbjct: 1069 KIKSKAIISSSDDSSDEDKLK-----IAD-DGNARNSNSDSDNAETLN 1110


>gi|116283952|gb|AAH24749.1| Ctr9 protein [Mus musculus]
          Length = 936

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 315/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATAD-----ISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGD--KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|116283981|gb|AAH10344.1| Ctr9 protein [Mus musculus]
          Length = 939

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 315/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATAD-----ISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGD--KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|51593596|gb|AAH80719.1| Ctr9 protein [Mus musculus]
          Length = 902

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 315/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATAD-----ISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGD--KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLERR 878


>gi|115304842|gb|AAI23598.1| CTR9 protein [Bos taurus]
          Length = 875

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 309/857 (36%), Positives = 475/857 (55%), Gaps = 63/857 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGD--KMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE 843
              Q +E  RQ  L E+
Sbjct: 844 KQEQEKELLRQKLLKEQ 860


>gi|74138245|dbj|BAE28606.1| unnamed protein product [Mus musculus]
          Length = 897

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 315/875 (36%), Positives = 487/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATAD-----ISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGD--KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|52346058|ref|NP_001005076.1| RNA polymerase-associated protein CTR9 homolog [Xenopus (Silurana)
           tropicalis]
 gi|82235822|sp|Q6DEU9.1|CTR9_XENTR RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|49900213|gb|AAH76995.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Xenopus
           (Silurana) tropicalis]
          Length = 1172

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 311/881 (35%), Positives = 481/881 (54%), Gaps = 69/881 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQVKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL 
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAGVRLGMGHCFVKLNKLDKARLAFGRALD 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+P  V ALV LAV++L   EA  I+ G++ + +A+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNPTCVGALVGLAVLELNNKEADSIKNGVQLLSKAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +       F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQ--FAAASFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKSHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQNALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WN--KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N   VT  +NLARL E + +   +  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTTYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+   + NLYAANG G VLA KG    ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYVREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK+ LL+A H+AP++  L F+  + +Q+ +   L+  +     V + V E
Sbjct: 726 ALFKCGKLQECKQILLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 833
           LE A R F++LS   +     FD     +    C  LL  A+ H   A +++++ +    
Sbjct: 786 LELAHRYFNYLSKVGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEEK---- 839

Query: 834 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEH 874
                    E R K E++K+ L +K   E E+KRL++ EE 
Sbjct: 840 ---------ELRAKQEQEKEILRQKLIKEQEEKRLKEIEEQ 871


>gi|440904272|gb|ELR54810.1| RNA polymerase-associated protein CTR9-like protein [Bos grunniens
           mutus]
          Length = 1185

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 316/887 (35%), Positives = 487/887 (54%), Gaps = 77/887 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAG------------VVLA 641
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G             VLA
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGSSNSVNLFITLGAVLA 670

Query: 642 EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 701
            KG F  ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY 
Sbjct: 671 HKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYK 725

Query: 702 NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTR 761
           + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +
Sbjct: 726 HQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEK 785

Query: 762 RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAA 821
               EV + V ELE A R FS+LS   +     FD     T    C  LL  A+ H   A
Sbjct: 786 SNLKEVLNAVKELELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARA 843

Query: 822 EREEQQNR-------QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
            +++++ R       Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 RKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 890


>gi|31753133|gb|AAH53910.1| Ctr9 protein [Mus musculus]
          Length = 939

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 314/875 (35%), Positives = 486/875 (55%), Gaps = 65/875 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF  AL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSSALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEYQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATAD-----ISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 785

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     +    C  LL  A+ H   A +++++ R    
Sbjct: 786 LELAHRYFSYLSKVGD--KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRA 843

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 844 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 878


>gi|322796271|gb|EFZ18847.1| hypothetical protein SINV_80216 [Solenopsis invicta]
          Length = 1022

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 322/962 (33%), Positives = 518/962 (53%), Gaps = 99/962 (10%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K++ F +ILE   S  ID    Y D   +++  L+ L  YY      E  + +K
Sbjct: 35  EYYKQQKIDDFIKILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANKEKNKDKK 91

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            + F  AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+L
Sbjct: 92  RDLFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSL 151

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQ
Sbjct: 152 LGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQ 211

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LD + V ALV L+V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   + 
Sbjct: 212 LDGQCVGALVGLSVLKLNQQQPESIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYN 271

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P+
Sbjct: 272 KVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPH 329

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK 
Sbjct: 330 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 389

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  
Sbjct: 390 TEQFPDDVEAWIELAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRL 449

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G  E A Q+ +++L                                  R + D  H  + 
Sbjct: 450 GNLEEARQNLEESLA---------------------------------RSKADALHDSVY 476

Query: 477 WNK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N   VT  +NLARL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + 
Sbjct: 477 YNSIAVTTTYNLARLNEALCIFDRAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEAS 536

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   +AL++N ++P+A S+LG+L L   +W   ++ F R   + T   D+Y+ ++LGN  
Sbjct: 537 DWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNI- 595

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    +  + E  H ++A  +Y +V+     N++A+NG G VLA KG  + ++D+F
Sbjct: 596 WLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWASNGIGAVLAHKGCVNEARDIF 655

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +     +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R
Sbjct: 656 AQVREATA-----EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGR 710

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
            +++A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V E
Sbjct: 711 AYFKAGKLKESKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHE 770

Query: 774 LENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNR 829
           L  + + F +LSA      HG   E+        C+ LL  A+ H   A R   EE+  R
Sbjct: 771 LGLSHKYFQYLSA------HGDRMEQLAEGEARRCQDLLSQAQYHVARARRLDEEEKMLR 824

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK-----EQWRS 884
           ++QE  RQA       R+ EEQ+K  LE+ + + E++ L++++E+ ++ K     ++  S
Sbjct: 825 RKQEEERQAF----KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVFDEMPS 878

Query: 885 STPASK-RRERSE--------NDDDE---------------VGHSEKRRRKGGKRRKKDK 920
             P  K +R R++        +D DE                G ++++R KG  RR+KD 
Sbjct: 879 EKPGKKGKRTRTDQYVSDSGGSDRDEGREEVPKERKRKRKPSGETKEKRSKGKGRRRKDA 938

Query: 921 SS 922
            S
Sbjct: 939 GS 940


>gi|332024785|gb|EGI64973.1| RNA polymerase-associated protein CTR9-like protein [Acromyrmex
           echinatior]
          Length = 1225

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 325/964 (33%), Positives = 518/964 (53%), Gaps = 99/964 (10%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K++ F +ILE   S  ID    Y D   +++  L+ L  YY      E  + +K
Sbjct: 49  EYYKQQKIDDFIKILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANKEKNKDKK 105

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            + F  AT  Y  A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+P+L
Sbjct: 106 RDLFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSL 165

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQ
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQ 225

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LD + V ALV L+V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   + 
Sbjct: 226 LDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYN 285

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P+
Sbjct: 286 KVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPH 343

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK 
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  
Sbjct: 404 TEQFPDDVEAWIELAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRL 463

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G  E A ++ +++L                                  R + D  H  + 
Sbjct: 464 GNLEEARKNLEESLA---------------------------------RSKADALHDSVY 490

Query: 477 WNK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N   VT  +NLARL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + 
Sbjct: 491 YNSIAVTTTYNLARLNEALCVFDRAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEAS 550

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   +AL++N ++P+A S+LG+L L   +W   ++ F R   + T   D+Y+ ++LGN  
Sbjct: 551 DWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNI- 609

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    +  + E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F
Sbjct: 610 WLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIF 669

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +     +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R
Sbjct: 670 AQVREATA-----EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGR 724

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
            +++A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V E
Sbjct: 725 AYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHE 784

Query: 774 LENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNR 829
           L  + + F +LSA      HG   E+        C+ LL  A+ H   A R   EE+  R
Sbjct: 785 LGLSHKYFQYLSA------HGDRMEQLAEAEARRCQDLLSQAQYHVARARRLDEEEKMLR 838

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKE-----QWRS 884
           ++QE  RQA       R+ EEQ+K  LE+ + + E++ L++++E+ ++ K      +  S
Sbjct: 839 RKQEEERQAF----KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPS 892

Query: 885 STPASK-RRERSE--------NDDD----EVGHSEKRRR-----------KGGKRRKKDK 920
             P  K +R R++        +D D    E+    KR+R           KG  RR+KD+
Sbjct: 893 EKPGKKGKRLRTDQYVSDSGGSDRDEGREEIPKERKRKRKPSSETKDRKSKGKGRRRKDE 952

Query: 921 SSRS 924
           S  S
Sbjct: 953 SGNS 956


>gi|383851981|ref|XP_003701509.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Megachile rotundata]
          Length = 1271

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 318/942 (33%), Positives = 512/942 (54%), Gaps = 79/942 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K+E F +ILE   S  ID    Y D   +++  L+ L  YY      E  + +K
Sbjct: 49  EYYKQHKIEDFIKILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKK 105

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            + F  AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+L
Sbjct: 106 RDLFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSL 165

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQ
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQ 225

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LD + V ALV L+V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   + 
Sbjct: 226 LDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYN 285

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P+
Sbjct: 286 KVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPH 343

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK 
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  
Sbjct: 404 TEQFPDDVEAWIELAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRL 463

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G  E A ++ +++L                                  R + D  H  + 
Sbjct: 464 GNLEEARKNLEESLA---------------------------------RSKADALHDSVY 490

Query: 477 WNK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N   VT  +NLARL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + 
Sbjct: 491 YNSIAVTTTYNLARLNEALCVFDKAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEAS 550

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   +AL++N ++P+A S+LG+L L   +W   ++ F R   + +   D+Y+ ++LGN  
Sbjct: 551 DWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPSTSTDAYSLIALGNI- 609

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    +  + E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F
Sbjct: 610 WLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIF 669

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +     +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R
Sbjct: 670 AQVREATA-----EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGR 724

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
            +++A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V E
Sbjct: 725 AYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHE 784

Query: 774 LENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNR 829
           L  + + F +LS       HG   E+   T    C+ LL  A+ H   A R   EE+  R
Sbjct: 785 LGLSHKYFQYLST------HGDRMEQLAETEARRCQDLLSQAQYHVARARRLDEEEKMLR 838

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKE-----QWRS 884
           ++QE  RQA       R+ EEQ+K  LE+ + + E++ L++++E+ ++ K      +  S
Sbjct: 839 RKQEEERQAF----KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPS 892

Query: 885 STPASK-RRERSE---NDDDEVGHSEKRRRKGGKRRKKDKSS 922
             P  K +R R++   +D    G  E R     +R++K K+S
Sbjct: 893 EKPGKKGKRVRTDQYVSDSGGSGRDEGREEAPRERKRKRKAS 934


>gi|307178712|gb|EFN67326.1| RNA polymerase-associated protein CTR9-like protein [Camponotus
           floridanus]
          Length = 1264

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 319/942 (33%), Positives = 510/942 (54%), Gaps = 79/942 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K+E F +ILE   S  ID    Y D   +++  L+ L  YY      E  + +K
Sbjct: 49  EYYKQQKIEDFIKILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANKEKNKDKK 105

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            + F  AT  Y  A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+P+L
Sbjct: 106 RDLFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSL 165

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C  KL    KAR AF+RALQ
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKALRTNPHCPAAVRLGMGHCFMKLNNQEKARLAFERALQ 225

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LD + V ALV L+V+ L   +   I+ G++ + +A+ I     M LN+LANHFFF   + 
Sbjct: 226 LDGQCVGALVGLSVLKLNQQQPDSIKTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYS 285

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T +   ++ S Y LAR++H + DY++A  YY  + +    P  F+ P+
Sbjct: 286 KVQHLALHAFHNTENEAMRAESCYQLARAFHVQNDYDQAFQYYYQATQ--FAPPVFVLPH 343

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK 
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  SD  AAL+A+ TA  +LK K   E+P E+LNN+G +H+  
Sbjct: 404 TEQFPDDVEAWIELAQILEQSDLNAALNAYGTATRILKDKVQAEIPPEILNNVGALHYRL 463

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G  E A ++ +++L                                  R + D  H  + 
Sbjct: 464 GNLEEARKNLEESLA---------------------------------RSKADALHDSIY 490

Query: 477 WNK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N   VT  +NLARL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + 
Sbjct: 491 YNSIAVTTTYNLARLNEALCIFDRAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEAS 550

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   +AL++N ++P+A S+LG+L L   +W   ++ F R   + T   D+Y+ ++LGN  
Sbjct: 551 DWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNI- 609

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    +  + E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F
Sbjct: 610 WLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIF 669

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +     +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R
Sbjct: 670 AQVREATA-----EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHVEVLQYLGR 724

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
            +++A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V E
Sbjct: 725 AYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHE 784

Query: 774 LENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNR 829
           L  + + F +LS       HG   E+        C+ LL  A+ H   A R   EE+  R
Sbjct: 785 LGLSHKYFQYLST------HGDRMEQLAEGEARRCQDLLSQAQYHVARARRLDEEEKMLR 838

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKE-----QWRS 884
           ++QE  RQA       R+ EEQ+K  LE+ + + E++ L++++E+ ++ K      +  S
Sbjct: 839 RKQEEERQAF----KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPS 892

Query: 885 STPASK-RRERSENDDDEVGHSEK---RRRKGGKRRKKDKSS 922
             P  K RR R++    + G S++   R     +RR+K K+S
Sbjct: 893 EKPGRKGRRVRTDQYISDSGGSDREEGREEAPKERRRKRKAS 934


>gi|340374236|ref|XP_003385644.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Amphimedon queenslandica]
          Length = 1121

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 323/948 (34%), Positives = 512/948 (54%), Gaps = 74/948 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K  +F ++L+  S  + +  Y D   +++  L++L  +Y    K E  +  K+E+
Sbjct: 58  YYKQDKWSEFEKLLQ-TSRTDANISYDDHEKDQMMALDSLAAHYVQKAKKERDKETKKEY 116

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F  AT  Y+ A +I M++    +G+  L L +G+ + Q+ + F  VL+   DN+PALLG+
Sbjct: 117 FSKATLLYSTADKIMMYDSRHLLGRAYLCLLEGDKMSQSEAQFNFVLQQSPDNLPALLGK 176

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           ACV FNR  Y  +L  YK+AL+ +P+C G +RLG+G C  KLG + KAR AF RAL L+P
Sbjct: 177 ACVSFNRKDYKGALVCYKKALRSNPNCSGTVRLGMGHCFMKLGNIDKARLAFTRALDLEP 236

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V ALV LA+++L   +   I++G+E + +A+ I     M LN+LANHFFF   +  V+
Sbjct: 237 QCVGALVGLAILELNNQQHDSIKRGVELLSKAYTIDSVNPMVLNHLANHFFFKKDYVKVQ 296

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T     +S S Y LAR++H +GDY++A  YY  +  +   P  F+ P++GL
Sbjct: 297 HLALHAFHGTEVETMRSESCYQLARAFHVQGDYDQAFQYYYQAT-QFAAPG-FVLPHFGL 354

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ L   D  +A   FEKVL   P N ETLK LG +Y      EK   A   L+K  + 
Sbjct: 355 GQMYLARQDSENAAQCFEKVLASQPGNYETLKILGSLYANSPSSEKRATAVTHLKKVTEE 414

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA-GEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+LG +L ++DT  +L A++ A  LL +  G ++P E+LNNIG +HF+ G++
Sbjct: 415 FPDDVEAWIELGGILEATDTEGSLKAYEKASQLLTETVGTDIPPEILNNIGCLHFKLGQY 474

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
             A   +  +L       + D +    ++                               
Sbjct: 475 NEAQSHYDQSLDRCTQECMQDEEYYNSLM------------------------------- 503

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VTV +N+ARL E + +   A  LY+ IL ++  Y+D YLRL  IA+ R  +  + +   E
Sbjct: 504 VTVRYNMARLHEALCEFEKAETLYKEILKEHPRYIDCYLRLGCIARDRQQIYEASDWFKE 563

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAAL 598
           AL+ N  + +A  ++G+L L   +W   ++ F R   +     D+Y+ LSLGN  + A++
Sbjct: 564 ALQKNQDHADAWVLMGNLHLAKQEWGPGQKKFERILQNPKTKGDTYSLLSLGNV-WLASI 622

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R    +  HL++A   Y  V+ + + NLYAANG G VL  KG +  ++D+F QV+E
Sbjct: 623 HQPHRDKTKDKRHLDRALSYYKDVLHKDSHNLYAANGIGAVLGHKGFYREARDVFAQVRE 682

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +     ++PDVW+NLAHVY  Q  +  A++MY+NCL KFY   + ++LLYLAR +++A
Sbjct: 683 ATA-----ELPDVWLNLAHVYIEQKQYISAIQMYENCLGKFYNFHNTEVLLYLARAYFKA 737

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  DCK +L++A H+AP +  L F+  +  +  ++STL+  + T  +V S V ELE A 
Sbjct: 738 GRILDCKTTLIKARHIAPHDSLLLFNLALVQRWSASSTLKNLQSTLADVLSAVRELEMAQ 797

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQA 838
           R F  LS   +     FD +  +   + C  LL  A+ H   A + E + R+ +E  +Q 
Sbjct: 798 RNFVFLSREGD--RLKFDLQFASHEAKRCADLLSQAQHHVARARKSEDEERELRE--KQE 853

Query: 839 ALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASK--RRERS- 895
              E  R+K  EQ+     +R+L+ +++  ++  +  Q +    R ++P  K  R++R  
Sbjct: 854 KEMETLRQKQIEQELAKERERQLQLQEQARQEFIQKTQNLLHFTREASPPPKPSRKKRGT 913

Query: 896 ---ENDDDE---------------VGHSEKRRRK---GGKRRKKDKSS 922
              ++DD E                 HSE  RRK   G KRR++ + S
Sbjct: 914 ADVQSDDPENEASASGPQRKRRRRKKHSESSRRKEERGEKRRQRKRES 961


>gi|328789632|ref|XP_396581.4| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Apis
           mellifera]
          Length = 1255

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 316/942 (33%), Positives = 511/942 (54%), Gaps = 79/942 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K++ F +ILE   S  ID    Y D   +++  L+ L  YY      E  + +K
Sbjct: 49  EYYKQHKIDDFIKILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKK 105

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            + F  AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+L
Sbjct: 106 RDLFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSL 165

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQ
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQ 225

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LD + V ALV L+V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   + 
Sbjct: 226 LDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYN 285

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P+
Sbjct: 286 KVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPH 343

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK 
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  
Sbjct: 404 TEQFPDDVEAWIELAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRL 463

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G  E A ++ +++L                                  R + D  H  + 
Sbjct: 464 GNLEEARKNLEESLA---------------------------------RSKADALHDSVY 490

Query: 477 WNK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N   VT  +NLARL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + 
Sbjct: 491 YNSIAVTTTYNLARLNEALCIFDKAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEAS 550

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   +AL++N ++P+A S+LG+L L   +W   ++ F R   + T   D+Y+ ++LGN  
Sbjct: 551 DWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNI- 609

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    +    E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F
Sbjct: 610 WLQTLHQSGKDKDREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIF 669

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +     +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R
Sbjct: 670 AQVREATA-----EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGR 724

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
            +++A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V E
Sbjct: 725 AYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHE 784

Query: 774 LENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNR 829
           L  + + F +LS      +HG   E+        C+ LL  A+ H   A R   EE+  R
Sbjct: 785 LGLSHKYFQYLS------VHGDRMEQLAEAEARRCQDLLSQAQYHVARARRLDEEEKMLR 838

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKE-----QWRS 884
           ++QE  RQA       R+ EEQ+K  LE+ + + E++ L++++E+ ++ K      +  S
Sbjct: 839 RKQEEERQAF----KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPS 892

Query: 885 STPASK-RRERSE---NDDDEVGHSEKRRRKGGKRRKKDKSS 922
             P  K +R R++   +D    G  E R     ++++K K+S
Sbjct: 893 EKPGKKGKRVRTDQYVSDSGGSGREEGREEAPREKKRKRKAS 934


>gi|340710827|ref|XP_003393985.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Bombus
           terrestris]
          Length = 1190

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 316/941 (33%), Positives = 507/941 (53%), Gaps = 77/941 (8%)

Query: 4   EYFKQGKVEQFRQILEEG-SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKE 62
           EY+KQ K+E F +ILE   +   ID  Y D   +++  L+ L  YY      E  + +K 
Sbjct: 49  EYYKQHKIEDFIKILESSRTDANID--YRDYEKDQMRGLDMLAAYYVQEANREKNKDKKR 106

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALL 121
           + F  AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LL
Sbjct: 107 DLFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLL 166

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQL
Sbjct: 167 GKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQL 226

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           D + V ALV L+V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   +  
Sbjct: 227 DGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNK 286

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
           V+ L   A   T +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++
Sbjct: 287 VQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPHF 344

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAA 358
           GLGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK  
Sbjct: 345 GLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVT 404

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKG 417
           +  P D +A+I+L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  G
Sbjct: 405 EQFPDDVEAWIELAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLG 464

Query: 418 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
             E A ++ +++L                                  R + D  H  + +
Sbjct: 465 NLEEARKNLEESLA---------------------------------RSKADALHDSVYY 491

Query: 478 NK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
           N   VT  +NLARL E +     A  LY+ IL K+ +YVD YLRL  +A+ +  +  + +
Sbjct: 492 NSIAVTTTYNLARLNEALCIFDKAEKLYKAILKKHPNYVDCYLRLGCMARDKGQIYEASD 551

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNY 594
              +AL +N ++P+A S+LG+L L    W   ++ F R   +     D+Y+ ++LGN  +
Sbjct: 552 WFKDALSINNEHPDAWSLLGNLHLVKMQWGPGQKKFERILKNPATSTDAYSLIALGNI-W 610

Query: 595 FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 654
              L    +    E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F 
Sbjct: 611 LQTLHQSGKDKDREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFA 670

Query: 655 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART 714
           QV+EA +     +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R 
Sbjct: 671 QVREATA-----EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGRA 725

Query: 715 HYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAEL 774
           +++A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL
Sbjct: 726 YFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHEL 785

Query: 775 ENAVRVFSHLSAASNLHLHGFDEKKI-NTHVEYCKHLLDAAKIHREAAER---EEQQNRQ 830
             + + F +LS       HG    ++       C+ LL  A+ H   A R   EE+  R+
Sbjct: 786 GLSHKYFQYLST------HGDKMGQLAEAETRRCQDLLSQAQYHVARARRLDEEEKMLRR 839

Query: 831 RQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKE-----QWRSS 885
           +QE  RQA       R+ EEQ+K  LE+ + + E++ L++++E+ ++ K      +  S 
Sbjct: 840 KQEEERQAF----KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPSE 893

Query: 886 TPASK-RRERSE---NDDDEVGHSEKRRRKGGKRRKKDKSS 922
            P  K R+ R++   +D    G  E R     +R++K K+S
Sbjct: 894 KPGRKGRKARTDQYVSDSGGSGREEGREEAPRERKRKRKAS 934


>gi|380026141|ref|XP_003696818.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Apis florea]
          Length = 1254

 Score =  488 bits (1255), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 316/942 (33%), Positives = 510/942 (54%), Gaps = 79/942 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K++ F +ILE   S  ID    Y D   +++  L+ L  YY      E  + +K
Sbjct: 49  EYYKQHKIDDFIKILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKK 105

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            + F  AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+L
Sbjct: 106 RDLFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSL 165

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQ
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQ 225

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LD + V ALV L+V+ L   +   IR G++ + +A+ I     M LN+LANHFF    + 
Sbjct: 226 LDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFXKKDYN 285

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P+
Sbjct: 286 KVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPH 343

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK 
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  
Sbjct: 404 TEQFPDDVEAWIELAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRL 463

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G  E A ++ +++L                                  R + D  H  + 
Sbjct: 464 GNLEEARKNLEESLA---------------------------------RSKADALHDSVY 490

Query: 477 WNK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N   VT  +NLARL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + 
Sbjct: 491 YNSIAVTTTYNLARLNEALCIFDKAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEAS 550

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   +AL++N ++P+A S+LG+L L   +W   ++ F R   + T   D+Y+ ++LGN  
Sbjct: 551 DWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNI- 609

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    +    E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F
Sbjct: 610 WLQTLHQSGKDKDREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIF 669

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +     +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R
Sbjct: 670 AQVREATA-----EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGR 724

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
            +++A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V E
Sbjct: 725 AYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHE 784

Query: 774 LENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNR 829
           L  + + F +LSA      HG   E+        C+ LL  A+ H   A R   EE+  R
Sbjct: 785 LGLSHKYFQYLSA------HGDRMEQLAEAEARRCQDLLSQAQYHVARARRLDEEEKMLR 838

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKE-----QWRS 884
           ++QE  RQA       R+ EEQ+K  LE+ + + E++ L++++E+ ++ K      +  S
Sbjct: 839 RKQEEERQAF----KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPS 892

Query: 885 STPASK-RRERSE---NDDDEVGHSEKRRRKGGKRRKKDKSS 922
             P  K +R R++   +D    G  E R     ++++K K+S
Sbjct: 893 EKPGKKGKRVRTDQYVSDSGGSGREEGREEAPREKKRKRKAS 934


>gi|91093513|ref|XP_969441.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Tribolium
           castaneum]
 gi|270002675|gb|EEZ99122.1| hypothetical protein TcasGA2_TC005228 [Tribolium castaneum]
          Length = 1187

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 318/974 (32%), Positives = 516/974 (52%), Gaps = 100/974 (10%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+KQGK+E F +ILE  S  + +  Y D   +++  L+ L  YY      E  + +K E
Sbjct: 49  EYYKQGKIEDFIKILE-ASRTDANVDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRE 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+P+LLG
Sbjct: 108 LFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ +N+  +  +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQLD
Sbjct: 168 KACIAYNKKDFRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLD 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P+ V ALV LA++ L   +   IR G++ + +A+ I     M LN+LANHFFF   +  V
Sbjct: 228 PQCVGALVGLAILKLNLQQPESIRSGVQMLSKAYTIDSSNPMVLNHLANHFFFKKDYSKV 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   A   T +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++G
Sbjct: 288 QHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPTAFVLPHFG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  L+K  +
Sbjct: 346 LGQMYIYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLKKVTE 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK-AGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  SD   +L+A+ TA  +L K    ++P E+LNN+G +H+    
Sbjct: 406 QFPDDIEAWIELAQILEQSDLQGSLNAYGTAIQILNKDVQADIPTEILNNVGALHYRLNN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            E A ++ ++AL                                  R + +  H    +N
Sbjct: 466 LEEAKKNLEEALT---------------------------------RAKTEAEHDPQYYN 492

Query: 479 --KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
              VT+ +NLARL E +     +  LY+ IL +  +YVD YLRL  +A+ + ++  + + 
Sbjct: 493 SISVTITYNLARLNEALCLFDKSEKLYKDILKERPNYVDCYLRLGCMARDKGHIYEASDW 552

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 595
             EAL+ N ++P+A S+LG+L L   +W   ++ + R   +    +DSY+ + LGN  + 
Sbjct: 553 FKEALRFNTEHPDAWSLLGNLHLAKAEWGPGQKKYERILKNPATSQDSYSLIVLGNV-WL 611

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
             L    +  + E  H E+A  ++ +V+     N++AANG G VLA KG  + ++D+F Q
Sbjct: 612 QTLHQPTKDKEREKRHQERALSMFKQVLKIDPKNIWAANGIGAVLAHKGAVNEARDIFAQ 671

Query: 656 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTH 715
           V+EA +        DVW+N+AHVY  Q  F  A++MY+NCLRKF+   + ++L YLAR +
Sbjct: 672 VREATA-----DFCDVWLNIAHVYVEQKQFVSAIQMYENCLRKFFKYNNVEVLQYLARAY 726

Query: 716 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 775
           Y+A + ++ K  LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL 
Sbjct: 727 YKASKLKEAKMVLLKARRVAPHDTVLLYNIALVLQRLATHILKDEKSTLQTVLQAVHELG 786

Query: 776 NAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQ 832
            +++ F++L+   +     +D          CK LL  A+ H   A R   EE+Q R++Q
Sbjct: 787 LSLKYFTYLAEFGD--KMRYDVTLAAMEARQCKDLLSQAQYHVARARRVDEEERQLRRKQ 844

Query: 833 EAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK------------- 879
           E  R A       R+ EEQKK + E+ +L  EQ  L++++E+ ++ K             
Sbjct: 845 EDERTAF----KMRQLEEQKK-VEEEMRLTKEQ-LLQKRQEYKEKTKNALLFMEIPSEKT 898

Query: 880 --------EQWRSSTPA-------------SKRRERSENDDDEVGHSEKRRRKGGKR--- 915
                   +Q+ S + +              ++R+RS++   + G   KRR KGG     
Sbjct: 899 KGKGKGRKDQYISDSGSDRENQEGGEPKERGRKRQRSKDRKRKGGSGRKRREKGGHSDSE 958

Query: 916 --RKKDKSSRSHYE 927
             R K+K SR  ++
Sbjct: 959 SDRPKNKRSRKKFK 972


>gi|307197750|gb|EFN78899.1| RNA polymerase-associated protein CTR9-like protein [Harpegnathos
           saltator]
          Length = 1015

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 303/890 (34%), Positives = 490/890 (55%), Gaps = 70/890 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K+E F +ILE   S  ID    Y D   +++  L+ L  YY      E  + +K
Sbjct: 49  EYYKQQKIEDFIKILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKK 105

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            + F  AT  Y  A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+P+L
Sbjct: 106 RDLFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSL 165

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQ
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQ 225

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LD + V ALV L+V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   + 
Sbjct: 226 LDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYN 285

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P+
Sbjct: 286 KVQHLALHAFHNTENESMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPH 343

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK 
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  
Sbjct: 404 TEQFPDDVEAWIELAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRL 463

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
              E A ++ +++L                                  R + D  H  + 
Sbjct: 464 SSLEEARKNLEESLA---------------------------------RSKADALHDSVY 490

Query: 477 WNK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N   VT  +NLAR+ E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  +  + 
Sbjct: 491 YNSISVTTTYNLARMNEALCIFDRAEKLYKDILKEHPNYMDCYLRLGCMARDKGQIYEAS 550

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   +AL++N ++P+A S+LG+L L   +W   ++ F R   + +   D+Y+ ++LGN  
Sbjct: 551 DWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPSTSTDAYSLIALGNI- 609

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    +  + E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F
Sbjct: 610 WLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIF 669

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +     +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R
Sbjct: 670 AQVREATA-----EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHVEVLQYLGR 724

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
            +++A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V E
Sbjct: 725 AYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHE 784

Query: 774 LENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNR 829
           L  + + F +LSA      HG   E+  +     C+ LL  A+ H   A R   EE+  R
Sbjct: 785 LGLSHKYFQYLSA------HGDRMEQLADAEARRCQDLLSQAQYHVARARRLDEEEKMLR 838

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 879
           ++QE  RQA       R+ EEQ+K  LE+ + + E++ L++++E+ ++ K
Sbjct: 839 RKQEEERQAF----KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTK 882


>gi|350396433|ref|XP_003484550.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Bombus
           impatiens]
          Length = 1248

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 304/890 (34%), Positives = 486/890 (54%), Gaps = 70/890 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQ K+E F +ILE   S  ID    Y D   +++  L+ L  YY      E  + +K
Sbjct: 49  EYYKQHKIEDFIKILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKK 105

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
            + F  AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+L
Sbjct: 106 RDLFTKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSL 165

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQ
Sbjct: 166 LGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQ 225

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV L+V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   + 
Sbjct: 226 LNGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYN 285

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P+
Sbjct: 286 KVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPH 343

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK 
Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  
Sbjct: 404 TEQFPDDVEAWIELAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRL 463

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G  E A ++ +++L                                  R + D  H  + 
Sbjct: 464 GNLEEARKNLEESLA---------------------------------RSKADALHDSVY 490

Query: 477 WNK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N   VT  +NLARL E +     A  LY+ IL K+ +YVD YLRL  +A+ +  +  + 
Sbjct: 491 YNSIAVTTTYNLARLNEALCIFDKAEKLYKAILKKHPNYVDCYLRLGCMARDKGQIYEAS 550

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   +AL +N ++P+A S+LG+L L    W   ++ F R   +     D+Y+ ++LGN  
Sbjct: 551 DWFKDALSINNEHPDAWSLLGNLHLVKMQWGPGQKKFERILKNPATSTDAYSLIALGNI- 609

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    +    E  H ++A  +Y +V+     N++AANG G VLA KG  + +KD+F
Sbjct: 610 WLQTLHQSGKDKDREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEAKDIF 669

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
           +QV+EA +     +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R
Sbjct: 670 SQVREATA-----EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGR 724

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
            +++A + ++ K +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V E
Sbjct: 725 AYFKAGKLREAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHE 784

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKI-NTHVEYCKHLLDAAKIHREAAER---EEQQNR 829
           L  + + F +LS       HG    ++       C+ LL  A+ H   A R   EE+  R
Sbjct: 785 LGLSHKYFQYLST------HGDKMGQLAEAETRRCQDLLSQAQYHVARARRLDEEEKMLR 838

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 879
           ++QE  RQA       R+ EEQ+K  LE+ + + E++ L++++E+ ++ K
Sbjct: 839 RKQEEERQAF----KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTK 882


>gi|431919638|gb|ELK18026.1| RNA polymerase-associated protein CTR9 like protein [Pteropus
           alecto]
          Length = 1161

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 312/875 (35%), Positives = 479/875 (54%), Gaps = 77/875 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++      C K      H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 726 ALFK------CGK------HVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 773

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 774 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 831

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 832 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 866


>gi|443695316|gb|ELT96257.1| hypothetical protein CAPTEDRAFT_179822 [Capitella teleta]
          Length = 917

 Score =  484 bits (1246), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 298/897 (33%), Positives = 484/897 (53%), Gaps = 75/897 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+KQ   + F +ILE  S  + +  Y++   +++  L+ L  +Y      E+ + +K +
Sbjct: 49  EYYKQEHADDFVRILE-ASRTDANINYSNFERDQMRALDTLAAFYVQQAHKESNKEKKRD 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LLG
Sbjct: 108 IFTQATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLGQSNNNIPSLLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  +  +L +YK+AL+ +P CP A+RLG+G C  KL ++ KARQAF+RAL+LD
Sbjct: 168 KACIAFNKKDFRGALAYYKKALRTNPECPAAVRLGMGHCFVKLSKMEKARQAFERALELD 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
              V AL+ LA+++L       I+ G++ + +A+ I     M LN+LANHFF+   +  V
Sbjct: 228 SNCVGALIGLAIIELNNKTPDSIKHGVQLLSKAYTIDSTNPMVLNHLANHFFYKKDYQKV 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   A   T +   ++ S Y LAR++H +GDY++A  YY  S +       FI P++G
Sbjct: 288 QHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQSTQ--FSSQNFILPFFG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A+  FEKVL+  P N ET+K LG +Y      EK   A++ L+K  +
Sbjct: 346 LGQMYIFRGDNENAIQCFEKVLKAQPGNYETMKILGSLYANSDDPEKLSLAKQHLKKITE 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
               D +A+I+L ++L  +D   AL A+ TA  +L  K   E+P E+LNN+  +HF  G 
Sbjct: 406 QFAEDVEAWIELAQILERNDLMGALSAYGTATGILTDKVEAEIPPEILNNVAALHFRMGN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A +S++ +L                                  R   + +H E  + 
Sbjct: 466 LDEAKKSYELSL---------------------------------ERSRKEASHDENYYG 492

Query: 479 K--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
              VT  +NLARL E   D   A  LY+ IL ++ +YVD YLRL  +A+ R  +  + + 
Sbjct: 493 AIAVTTTYNLARLCEATFDFHKAEELYKDILREHPNYVDCYLRLGCMARDRGQIYEASDW 552

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 595
             EAL++N  +P+A S++G+L L   +W   ++ F R         D Y+ ++LGN  + 
Sbjct: 553 FKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILQRPATKDDPYSMIALGNV-WL 611

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
             L    R  + E  H ++A  +Y  V+   + N++AANG G VLA KG  + ++D+F Q
Sbjct: 612 QTLHMPMRDKEKEKRHQDRALSMYKAVLRSDSRNIWAANGIGCVLAHKGHINEARDIFAQ 671

Query: 656 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTH 715
           V+EA +        DVW+N+AHVY  Q  F  A++MY+NCL+KF+ +    I++YLAR +
Sbjct: 672 VREATAD-----FQDVWLNIAHVYVEQKQFVAAVQMYENCLKKFHSHHQTDIMMYLARAY 726

Query: 716 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 775
           Y+  + ++CK++LL+A H++PS+  L ++  +  QK + S L+  +     V   V +LE
Sbjct: 727 YKCGKLRECKQTLLKARHVSPSDTVLLYNVALVQQKLATSILRDEKSNLKAVLGAVHDLE 786

Query: 776 NAVRVFSHLSAASNLHLHG----FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQR 831
            A R F++LS       HG    FD  +       C  LL  A+ H   A + ++Q++  
Sbjct: 787 LANRYFTYLSQ------HGDRMKFDLAQAAAEARQCSDLLSQAQYHVGRARKIDEQDK-- 838

Query: 832 QEAARQAALAEEARRKAEEQKKYLLEKRKL--EDEQKRLRQQEEHFQRVKEQWRSST 886
                      E RRK EE+++ L +KR+L  E+EQK+   QE+     + Q+   T
Sbjct: 839 -----------EMRRKQEEEREALRQKRQLKEEEEQKQKVDQEKRLLEQRAQYIQKT 884


>gi|340713450|ref|XP_003395256.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Bombus
           terrestris]
          Length = 1167

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 293/890 (32%), Positives = 484/890 (54%), Gaps = 70/890 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           +Y+KQ ++E F ++L+        +Y  + + ++I +L+ L   Y      E  + +K  
Sbjct: 40  DYYKQHRIEDFIKVLQSSRDNASVDYRGNEQ-DQIRVLDMLAACYMQEANREKNKVKKRH 98

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPALLG 122
            F  A Q +  A  I M++ +  + +  L LL + ++ QA + F  +L    +N+P LLG
Sbjct: 99  LFTKAAQLHTNADEIVMYDQNHILSRAYLCLLERDKMNQADNQFNFILNLSPNNIPCLLG 158

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +ACV FNR  Y  +L FYK+AL+++P+CP A+RLG+G C  KL    KAR AF+RALQLD
Sbjct: 159 KACVAFNRKNYRGALAFYKKALRINPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLD 218

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
            + V ALV L++M L   +   IR G++ + +A+ I P  +  LN+LANHFFF   +  V
Sbjct: 219 GQCVGALVGLSIMQLNEQQPDSIRTGIQMLSKAYIIDPTNSTVLNHLANHFFFKKNYNKV 278

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
             L   A   T +   ++ S Y LAR +H +G Y +A  YY  ++ +   P  F+ P++G
Sbjct: 279 HNLALHAFHNTENDVIRAESCYQLARVFHIEGKYNQAFQYYYQAI-QFASP-TFVLPHFG 336

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +   D   A   FEKVLE++PDNCET+K LG +Y   G   K   A+  LRK  +
Sbjct: 337 LGQMYIYRDDVEKAEQCFEKVLEVHPDNCETMKILGSLYANSGSQSKRDIAKNYLRKVTE 396

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  SD  AAL+ + T   +LK+  + ++P E+LNN+G +H+  G 
Sbjct: 397 QFPDDIEAWIELAQILEESDHKAALNVYGTVIRILKEQNQTDIPSEILNNVGALHYRLGN 456

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            E A ++ + +L                                  R E D  H  + +N
Sbjct: 457 LEEAKKNLEVSL---------------------------------MRSEADALHDPVYYN 483

Query: 479 KVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
            +TV   +NLARL E +     A  LYR IL K+ +Y+D YLRL  +A+ +  +  + + 
Sbjct: 484 SITVTTKYNLARLNEALCIFDEAEKLYRAILKKHPNYIDCYLRLGCMARDKGEIYEAFDW 543

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 595
             +AL +N ++P+A  ++G+L L    W  A++ F R  ++     D+Y+ ++LGN  + 
Sbjct: 544 FKDALSINSRHPDAWILMGNLHLSKMQWGLAQKKFERIINEPETSTDAYSLIALGNI-WL 602

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
             L  +K+    +  + ++A  +Y +V+  +  N++AANG G VLA KG  + ++D+F Q
Sbjct: 603 ETLYQDKKGKNRDKKYQKRALAMYKKVLRNNPKNIWAANGIGAVLAHKGYVNEARDIFAQ 662

Query: 656 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTH 715
           V++A +     + PDVW+N+AH+Y  Q  F  A++MY NCLRKFY   D ++L YL R +
Sbjct: 663 VRDATA-----KFPDVWLNIAHIYVEQQQFFNAIQMYINCLRKFYKYHDVEVLQYLGRAY 717

Query: 716 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 775
           ++A + ++ K +LL+ I +AP +  L ++    +Q  +  TL+  R T   V   V EL 
Sbjct: 718 FKAGKLKEAKLTLLKGIRVAPQDTVLLYNIAFVLQCLAIQTLKDARSTLTTVLEAVRELA 777

Query: 776 NAVRVFSHLSAASNLHLHGFDEKKI-NTHVEYCKHLLDAAKIHREAAER---EEQQNRQR 831
            + + F +LS       HG   +++ N     C+ LL  A+ H   A R   EE+  +++
Sbjct: 778 LSHKYFQYLSR------HGDKIRQLANAEAGSCQDLLSQAQYHVARARRLDEEEKILKRK 831

Query: 832 QEAARQA--ALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 879
           QE  RQ       E +RK+EE ++        + E++ +++++E+ ++ K
Sbjct: 832 QEEERQVFKIRQTEEKRKSEEMRR--------QKEEEMIQKRQEYVEKTK 873


>gi|330840509|ref|XP_003292257.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum]
 gi|325077520|gb|EGC31227.1| hypothetical protein DICPUDRAFT_50293, partial [Dictyostelium
           purpureum]
          Length = 981

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 304/919 (33%), Positives = 514/919 (55%), Gaps = 73/919 (7%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           +  EY+KQ ++ +F++IL    +PEI+ YY++ +++RIA+LNAL  YYT +G  E  + +
Sbjct: 50  LATEYYKQDRINEFKEILSVVLTPEIERYYSNDKFDRIAMLNALASYYTQMGSQEKDKSQ 109

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-ADRDN--- 116
           ++E+F  AT ++ KA +ID H+P TW+GK  LLL KG+VE+A + FK VL+ A+++    
Sbjct: 110 RDEYFHQATFHFTKADKIDPHQPLTWIGKAVLLLCKGDVERADTNFKQVLDLANKEPALP 169

Query: 117 -VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
            +PALLG AC+ FN+G Y  +L+ Y++ +Q + +C  A+RLG+G C +KLG+  KA++AF
Sbjct: 170 VLPALLGSACILFNKGNYIKALDTYQKVIQQNSNCLPAVRLGLGYCYFKLGRNNKAKEAF 229

Query: 176 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
           +R L+LD +NVEA++ L+++ +  N+   I + M  +  A+++ P   + LN+LANH+F+
Sbjct: 230 KRVLELDRDNVEAMIGLSLVLMNDNQ---IDEAMNLILEAYQLAPTNPIVLNHLANHYFY 286

Query: 236 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
            G+   V  L   AL  T+    K+ S Y + ++ H+   + +A  +Y  +V  +  P +
Sbjct: 287 RGEFQKVHTLGIAALNNTDVSHIKAESSYLVGKALHATQRWSEALQFYHQAV--LKNP-D 343

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK------ 349
           F    +GLGQ+ +   DF  A++ FE VL   P+N ETL+ LG +Y + G + K      
Sbjct: 344 FYLAQFGLGQIYIHNEDFDKAISCFENVLAKQPNNYETLQILGSLY-KHGSLYKNSMNTA 402

Query: 350 -AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
            A  +L+KA +I+P D   + +L ++L  S+ GAAL+A++    LLK       +E+LNN
Sbjct: 403 TAANVLKKAIEINPNDYNNWFELAQILEISEVGAALEAYEKGLALLKNENITPSLEILNN 462

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
           I V+  +KG    A Q++ D +           K   Y +D      QFK +        
Sbjct: 463 IAVLRHQKGLNSEAEQTYLDTI-----------KQSGYELD------QFKAVN------- 498

Query: 469 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
                      VT  +NLARL E +     A  LYR I+ ++ +Y D YLRL+ I K + 
Sbjct: 499 -----------VTTTYNLARLYESMGQMNRAEELYRGIIKEHPNYYDCYLRLSQIFKNQG 547

Query: 529 NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKD-SYATL 587
           +   + E + E L +      A ++ G+L L  ++W  A++ F    + ++ K+ +YATL
Sbjct: 548 DTFEANEWIKEVLHIQPNSQEAWALYGNLHLSKEEWYNAQKKFEQILENSENKNETYATL 607

Query: 588 SLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 647
           SLGN  Y A   N  +  K    +L  A+  Y RV+ ++ +N+YAANG G++ AEKG  +
Sbjct: 608 SLGNLYYNAKFSNPDKVEK----YLGNAESFYQRVLGKNPTNIYAANGIGMITAEKGNLN 663

Query: 648 VSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQI 707
           ++ D+F Q++EAA   + V +     NLAHVY A+G    A+K+Y+ CL+K   N+  +I
Sbjct: 664 LASDIFLQIREAAIDCIPVSL-----NLAHVYMARGLIDNAIKLYEGCLKK--SNSPKEI 716

Query: 708 ---LLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTA 764
              + YL++ ++EA ++ DCK++L +AIHL P +  + F+  + ++ F+   L K ++ A
Sbjct: 717 ETTMHYLSKAYFEANRFYDCKQTLKKAIHLYPYDPVIHFNLAICIESFTNVFLGKHQKNA 776

Query: 765 DEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE 824
            E    + ELE A ++ S+L+         F+  K   H+     LL    I  E+  + 
Sbjct: 777 GETLVVLKELEFAQKLISNLATVKPNPKLKFNLNKAKVHLGSIDKLLARVVIEYESLLKA 836

Query: 825 EQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRS 884
           EQ+  ++    R+ A  E  R++ E+++K +  + +LE   +  R+  E       +   
Sbjct: 837 EQELSKK----RELAFEEVKRQEEEKRRKEMEIQAELEARAESERKLAEELAEQTREIEK 892

Query: 885 STPASKRRERSENDDDEVG 903
           +   S+R+ +S + DD+V 
Sbjct: 893 TLAESERKRKSPDADDQVS 911


>gi|47230441|emb|CAF99634.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1210

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 322/945 (34%), Positives = 503/945 (53%), Gaps = 70/945 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEDFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           +E    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPAL 166

Query: 121 LG-QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           LG +AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL
Sbjct: 167 LGSKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRAL 226

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           +L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +
Sbjct: 227 ELNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDY 286

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
             V+ L   A   T            ++   H + DY++A  YY  + +  +    F+ P
Sbjct: 287 SKVQHLALHAFD-TQRLKLCMQRVATVSAVVHVQEDYDQAFQYYYQATQFASST--FVLP 343

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRK 356
           ++GLGQ+ +   D  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K
Sbjct: 344 FFGLGQMYVYRRDKENAAQCFEKVLKSYPNNYETMKILGSLYAASDDQEKRDIAKGHLKK 403

Query: 357 AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFE 415
             +  P D +A+I+L ++L  +D   AL A+ TA R L  K   +VP E+LNN+G +HF 
Sbjct: 404 VTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQDKVQADVPPEILNNLGALHFR 463

Query: 416 KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 475
            G    A     D  G+ +   +L S  +++  +          +    R + +G H E 
Sbjct: 464 LGNLGEAKV---DGSGEPVTSLILRSFNQSFKRELCPKYF----LASLERAKAEGEHDEH 516

Query: 476 PWNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDA----------------- 516
            +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD                  
Sbjct: 517 YYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCKLENTAEMEHKKKSCFC 576

Query: 517 ----------YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVK 566
                     YLRL A+A+ + N   + +   EAL++N  +P+A S++G+L L   +W  
Sbjct: 577 LISFTVWPTGYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGP 636

Query: 567 AKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQ 625
            ++ F R     +   D+Y+ L+LGN  +   L    R  + E  H ++A  +Y +V+  
Sbjct: 637 GQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDREKEKRHQDRALAIYKQVLRN 695

Query: 626 HTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNF 685
              NLYAANG G VLA KG +  ++D+F QV+EA +      + DVW+NLAH+Y  Q  +
Sbjct: 696 DPKNLYAANGIGAVLAHKGYYREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQY 750

Query: 686 ALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDA 745
             A++MY+NCL+KFY   + ++LLYLAR  ++  + Q+CK+ LL+A H+APS+  L F+ 
Sbjct: 751 ISAVQMYENCLKKFYKYQNTEVLLYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNV 810

Query: 746 GVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVE 805
            + +Q+ +   L+  +     V S V ELE A R FS+LS A +     FD     +   
Sbjct: 811 ALVLQRLATLVLKDEKSNLKAVLSAVKELELAHRYFSYLSKAGDKMR--FDLALAASEAR 868

Query: 806 YCKHLLDAAKIHREAAER---EEQQNRQRQEAA----RQAALA--EEARRKAEEQKKYLL 856
            C  LL  A+ H   A +   EE++ R +QE      RQ  L   EE R K  E++K LL
Sbjct: 869 QCSDLLSQAQYHVARARKQDEEEKELRAKQEQERDLLRQQLLKEQEEKRNKELEEQKKLL 928

Query: 857 EKRKLEDEQKR--LRQQEEHFQRVKEQWRSSTPASKRRERSENDD 899
           E+R +  E+ +  L   +   +  KE+ + S+ A +R++  + DD
Sbjct: 929 EQRAMYVEKTKNLLSFADVPKEMAKEKKKGSSGAGRRKKGGDMDD 973


>gi|390342225|ref|XP_003725617.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
           [Strongylocentrotus purpuratus]
          Length = 1120

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 288/873 (32%), Positives = 481/873 (55%), Gaps = 61/873 (6%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+K+  V+ F +I     +    +Y  + + +++  L+ L  YY    + E  +  K+E
Sbjct: 54  EYYKKESVDDFVKIFASWQADANLDYSGNEK-DQMTALDTLAAYYVQQARKEKNKDSKKE 112

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A RI M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG
Sbjct: 113 LFTQATLLYTMADRIVMYDQNHLLGRACFCLLEGDKMDQADAQFNFVLNQAPNNIPALLG 172

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  +  +L +YK+AL+ +P+CP A+RLG+G C  +LG+  KAR AF+RALQLD
Sbjct: 173 KACISFNKKDWRGALAYYKKALRTNPNCPAAVRLGMGHCFVRLGKPDKARLAFERALQLD 232

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P  V A+V LA+++        I+KG++ + RA+ I     M LN+LANHFFF   +  V
Sbjct: 233 PRCVGAIVGLAILEANGKAPDSIKKGVQLLSRAYTIDSGNPMVLNHLANHFFFKKDYTKV 292

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   AL  T +   ++ S Y LARS+H +GDY++A  YY  +         F+ P++G
Sbjct: 293 QHLALHALHGTENEAIQAESCYQLARSFHVQGDYDQAFQYYYQATTYATP--NFVLPHFG 350

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +   D  +A   FEKVL+  P N ET+K LG +Y      EK   A+  L+K  +
Sbjct: 351 LGQMYIHRRDTENASQCFEKVLKAQPGNYETMKILGSLYSNSKDEEKRDIAKGHLQKVVE 410

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  +D   AL A+ TA  +LK K   +VP E+LNN+G +H+  G 
Sbjct: 411 QFPDDVEAWIELAQILEITDVQTALSAYGTATRILKDKVQADVPPEILNNVGALHYRLGN 470

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A + ++ +L                                    + +  H E+ +N
Sbjct: 471 VQEAKRYYEASL---------------------------------EHSKREREHDEMYYN 497

Query: 479 KVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
            ++V   FNLARL E  ++   A  LY+ IL ++ +YVD YLRL  +A+ R  +  + + 
Sbjct: 498 SISVTTSFNLARLHEAQYNMENAVKLYKEILKEHPNYVDCYLRLGCMARERGQIYEASDW 557

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 595
             EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  + 
Sbjct: 558 FKEALQINQDHPDAWSLIGNLHLGKQEWGPGQKKFERILKQPATQNDTYSLLALGNV-WL 616

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
             L    R  + E  H E+A   Y +V+   + N+YAANG G +LA KG    ++D+F+Q
Sbjct: 617 QTLYQPTRDKEKEKRHQERALARYKQVLRSDSRNIYAANGIGCILAMKGYIREARDVFSQ 676

Query: 656 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTH 715
           V+EA +      + DVW+NLAH+Y  Q  +  A++MY+NC++KF+   +  +L +LAR +
Sbjct: 677 VREATA-----DVSDVWLNLAHIYVEQKQYISAIQMYENCIKKFFKFHNTTVLSFLARAY 731

Query: 716 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 775
           ++  + ++C+++LL+A  ++P +  + ++  + +Q+ +   L+  +     V   V+EL+
Sbjct: 732 FKTGKLKECRQTLLKAKRVSPHDSLITYNLSLVLQRIAMYVLRDEKSNLKTVLGAVSELK 791

Query: 776 NAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN---RQRQ 832
            A R F++LS + +     FD  +  T    C  LL  A+ H + A R+++++   RQ+Q
Sbjct: 792 TAQRYFTYLSKSGDRMR--FDLSQAGTEARQCADLLSQAQYHVQRARRQDEEDRALRQKQ 849

Query: 833 EAARQAALAEE-----ARRKAEEQK-KYLLEKR 859
           E  R+A   +      A+++ EE + K L+EKR
Sbjct: 850 EEEREALKQKHLEIQMAKKQVEEDRTKALIEKR 882


>gi|390342223|ref|XP_799094.3| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
           [Strongylocentrotus purpuratus]
          Length = 1120

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 288/873 (32%), Positives = 481/873 (55%), Gaps = 61/873 (6%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+K+  V+ F +I     +    +Y  + + +++  L+ L  YY    + E  +  K+E
Sbjct: 54  EYYKKESVDDFVKIFASWQADANLDYSGNEK-DQMTALDTLAAYYVQQARKEKNKDSKKE 112

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A RI M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG
Sbjct: 113 LFTQATLLYTMADRIVMYDQNHLLGRACFCLLEGDKMDQADAQFNFVLNQAPNNIPALLG 172

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  +  +L +YK+AL+ +P+CP A+RLG+G C  +LG+  KAR AF+RALQLD
Sbjct: 173 KACISFNKKDWRGALAYYKKALRTNPNCPAAVRLGMGHCFVRLGKPDKARLAFERALQLD 232

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P  V A+V LA+++        I+KG++ + RA+ I     M LN+LANHFFF   +  V
Sbjct: 233 PRCVGAIVGLAILEANGKAPDSIKKGVQLLSRAYTIDSGNPMVLNHLANHFFFKKDYTKV 292

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   AL  T +   ++ S Y LARS+H +GDY++A  YY  +         F+ P++G
Sbjct: 293 QHLALHALHGTENEAIQAESCYQLARSFHVQGDYDQAFQYYYQATTYATP--NFVLPHFG 350

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +   D  +A   FEKVL+  P N ET+K LG +Y      EK   A+  L+K  +
Sbjct: 351 LGQMYIHRRDTENASQCFEKVLKAQPGNYETMKILGSLYSNSKDEEKRDIAKGHLQKVVE 410

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  +D   AL A+ TA  +LK K   +VP E+LNN+G +H+  G 
Sbjct: 411 QFPDDVEAWIELAQILEITDVQTALSAYGTATRILKDKVQADVPPEILNNVGALHYRLGN 470

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A + ++ +L                                    + +  H E+ +N
Sbjct: 471 VQEAKRYYEASL---------------------------------EHSKREREHDEMYYN 497

Query: 479 KVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
            ++V   FNLARL E  ++   A  LY+ IL ++ +YVD YLRL  +A+ R  +  + + 
Sbjct: 498 SISVTTSFNLARLHEAQYNMENAVKLYKEILKEHPNYVDCYLRLGCMARERGQIYEASDW 557

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 595
             EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  + 
Sbjct: 558 FKEALQINQDHPDAWSLIGNLHLGKQEWGPGQKKFERILKQPATQNDTYSLLALGNV-WL 616

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
             L    R  + E  H E+A   Y +V+   + N+YAANG G +LA KG    ++D+F+Q
Sbjct: 617 QTLYQPTRDKEKEKRHQERALARYKQVLRSDSRNIYAANGIGCILAMKGYIREARDVFSQ 676

Query: 656 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTH 715
           V+EA +      + DVW+NLAH+Y  Q  +  A++MY+NC++KF+   +  +L +LAR +
Sbjct: 677 VREATA-----DVSDVWLNLAHIYVEQKQYISAIQMYENCIKKFFKFHNTTVLSFLARAY 731

Query: 716 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 775
           ++  + ++C+++LL+A  ++P +  + ++  + +Q+ +   L+  +     V   V+EL+
Sbjct: 732 FKTGKLKECRQTLLKAKRVSPHDSLITYNLSLVLQRIAMYVLRDEKSNLKTVLGAVSELK 791

Query: 776 NAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN---RQRQ 832
            A R F++LS + +     FD  +  T    C  LL  A+ H + A R+++++   RQ+Q
Sbjct: 792 TAQRYFTYLSKSGDRMR--FDLSQAGTEARQCADLLSQAQYHVQRARRQDEEDRALRQKQ 849

Query: 833 EAARQAALAEE-----ARRKAEEQK-KYLLEKR 859
           E  R+A   +      A+++ EE + K L+EKR
Sbjct: 850 EEEREALKQKHLEIQMAKKQVEEDRTKALIEKR 882


>gi|194748531|ref|XP_001956698.1| GF24452 [Drosophila ananassae]
 gi|190623980|gb|EDV39504.1| GF24452 [Drosophila ananassae]
          Length = 1164

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 307/933 (32%), Positives = 495/933 (53%), Gaps = 90/933 (9%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K E F  +LEE  S E ++ Y D   + +  L+ L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTEDFVTLLEESRSDEANKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKREL 109

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 110 FMKATNLYTSADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 169

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 170 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQ 229

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 230 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 289

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 290 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQ--IAPANFVLPHYGL 347

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 348 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQ 407

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  
Sbjct: 408 FPEDIEAWIELAQILEQNDLQASLNAYGTASSILREKAKYEIPAEIQNNVASLHYRLGNL 467

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           + A ++ + AL           K  T  +D        KD++ +   +            
Sbjct: 468 KMAKETLESAL-----------KHATSEMD--------KDVKYYESIQ------------ 496

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 497 VTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 556

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     +     D+Y+ ++LGN++    L
Sbjct: 557 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTL 615

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+E
Sbjct: 616 HQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVRE 675

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A
Sbjct: 676 ATA-----DFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRA 730

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  + K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 731 NKLVEAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAQ 790

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R+
Sbjct: 791 KYFQYLS------VHG-DKNRFNIEVAGIEANTCQDLLSQAQYHVGRARRIDEEERSLRR 843

Query: 831 RQEAARQA---ALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQW-RSST 886
           +QE  R+A    +AE+ +R+ EE K             + L +++E+ ++ K     +  
Sbjct: 844 KQEEEREAFKLKVAEQRKRREEEAKT---------SRDQLLAKRQEYVEKTKNLLIIADA 894

Query: 887 PASKRRERSENDDDEVGHSEKRRRKGGKRRKKD 919
           PA                 EK R+KGG R +KD
Sbjct: 895 PA-----------------EKERKKGGGRPRKD 910


>gi|66816601|ref|XP_642310.1| RNA polymerase II complex component [Dictyostelium discoideum AX4]
 gi|60470113|gb|EAL68093.1| RNA polymerase II complex component [Dictyostelium discoideum AX4]
          Length = 1106

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 290/910 (31%), Positives = 499/910 (54%), Gaps = 97/910 (10%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           +  EY+KQ ++  F ++L++ +  ++++YY D + +RIA+LNAL  YYT LG  E  +  
Sbjct: 52  LANEYYKQDRITDFIEVLKQVTDADLEQYYKDSKLDRIAMLNALASYYTQLGSQEKDKSR 111

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN---- 116
           +EE+F  AT ++ KA RID H+P TW+GK  LLL KG+ E+A S FK VL+  + N    
Sbjct: 112 REEYFSNATFHFTKADRIDPHQPLTWIGKAVLLLTKGDYERAESNFKQVLDLAKSNNTLP 171

Query: 117 -VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
            +PA LG AC+ FN+G Y  +L+ Y++ +Q + +C  ++RLG+G C +KLG+  KA++AF
Sbjct: 172 VLPAKLGSACILFNQGNYIKALDTYQKVIQQNSNCLPSVRLGLGYCYFKLGRTKKAKEAF 231

Query: 176 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
           +R L+LD +NVEA++ LA++ +  N+   I + M+ +  A+++ P  ++ LN+LANH+FF
Sbjct: 232 KRVLELDRDNVEAMIGLALVLMNENQ---IPEAMKLILSAYQLAPTNSIVLNHLANHYFF 288

Query: 236 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
            G++  V  L   A   T+    K+ S Y + R++H+   ++ A  YY  +V+   K  +
Sbjct: 289 RGEYNKVNTLGVAAFNNTDVAHIKAESAYLIGRAFHATQRWQDAIQYYHQAVQ---KNPD 345

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY-------------- 341
                +GLGQ+ +   D+  A+  FE+VL   P+N ETL+ LG +Y              
Sbjct: 346 LYLAQFGLGQIHIHNEDYDKAILCFEQVLSKQPNNYETLQILGSLYKHGSLYKSNVKSTT 405

Query: 342 --------------------VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
                               +    I K + +L+KA +++P D+  + +LG++L S++  
Sbjct: 406 TTTSTTTTTNNNININNNNNLSNEIINKIKNVLKKATELNPNDSSNWFELGQVLESTEVS 465

Query: 382 AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 441
            AL+A++    LLKK G    +E+ NNI V+  +KG    A Q++ D             
Sbjct: 466 TALEAYEKGLNLLKKDGIVPSLEIQNNIAVLRHQKGLLVEAEQTYLD------------- 512

Query: 442 KTKTYVIDASASML-QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAAS 500
                +I  S   L QFK +                   +T  +NLARL E +     A 
Sbjct: 513 -----IIKQSGYQLNQFKSIN------------------ITSTYNLARLYETMGQVNKAE 549

Query: 501 VLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK 560
            LY+ I+ ++ +Y D YLRL+ I K + +   + E + E L +      A ++ G+L L 
Sbjct: 550 ELYKGIIKEHPNYYDCYLRLSCICKQQGDYYEAGEWIREVLDIQPDNQEAWALYGNLHLY 609

Query: 561 NDDWVKAKETFRAASDATDGKD-SYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELY 619
            ++W  A++ F   ++  D K+ +YA+LSLGN  Y A   N  +  K    ++  A++ Y
Sbjct: 610 KEEWYPAQKNFEQITENPDNKNETYASLSLGNIYYNAKFSNPDKVEK----YILNAEQFY 665

Query: 620 TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 679
            RV+ ++ +N+YAANG G+++AEKG  +++ + F Q++EA+   +      V +NLAH+Y
Sbjct: 666 NRVLTKNPTNIYAANGIGMIIAEKGNLNLAGETFLQIREASMDCI-----PVSVNLAHIY 720

Query: 680 FAQGNFALAMKMYQNCLRKFYYNTDAQ-ILLYLARTHYEAEQWQDCKKSLLRAIHLAPSN 738
            ++G F  A+K+Y+ CL+K     + + I++YLA+ +++A ++ D K++L +AIH+ P N
Sbjct: 721 VSKGLFDNAIKLYEGCLKKSTSPKEIETIIMYLAKVYFDANRFYDSKQTLKKAIHMYPHN 780

Query: 739 YTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEK 798
            ++ F+  ++++  +   L+K ++ A E  + + ELE A R+ + L+   +     F   
Sbjct: 781 LSIHFNLAISIEMQATIFLEKHQKNATETFNIIKELEFAQRLLTPLANTKSTPKLNFSPS 840

Query: 799 KINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAA--LAEEARRKAEEQKKYLL 856
           K  TH    + +L + +   E+  + E    +++EAA +    L EE R +  E K+ L 
Sbjct: 841 KAKTHQTSIEKILVSLRTEHESIVKIEADLSKKREAAFEEVKRLEEEKRIRDLELKQQLE 900

Query: 857 EKRKLEDEQK 866
           E  KLE E+K
Sbjct: 901 E--KLEAERK 908


>gi|195490356|ref|XP_002093105.1| GE21142 [Drosophila yakuba]
 gi|194179206|gb|EDW92817.1| GE21142 [Drosophila yakuba]
          Length = 1148

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 305/932 (32%), Positives = 492/932 (52%), Gaps = 88/932 (9%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K E F  +LEE  S +  + Y D   + +  L+ L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKREL 109

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 110 FMKATNLYTSADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 169

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 170 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQ 229

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 230 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 289

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 290 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQ--IAPANFVLPHYGL 347

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 348 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQ 407

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  
Sbjct: 408 FPEDIEAWIELAQILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNL 467

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           + A  + + AL           K  T  +D        KD++ +   +            
Sbjct: 468 KMAKDTLESAL-----------KHATSEMD--------KDVKYYESIQ------------ 496

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 497 VTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 556

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     +     D+Y+ ++LGN++    L
Sbjct: 557 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTL 615

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+E
Sbjct: 616 HQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVRE 675

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A
Sbjct: 676 ATA-----DFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRA 730

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  + K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 731 NKLVEAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAQ 790

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R+
Sbjct: 791 KYFQYLS------VHG-DKNRFNIEVAGIEANTCQDLLSQAQYHVGRARRIDEEERSLRR 843

Query: 831 RQEAARQA---ALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTP 887
           +QE  R+A    +AE+ +R+ EE K             + L +++E+ ++ K     +  
Sbjct: 844 KQEEEREAFKIKVAEQRKRREEEAKT---------SRDQLLAKRQEYVEKTKNMLIIADS 894

Query: 888 ASKRRERSENDDDEVGHSEKRRRKGGKRRKKD 919
           A                 EK R+KGG R +KD
Sbjct: 895 A----------------PEKDRKKGGGRARKD 910


>gi|194864807|ref|XP_001971117.1| GG14779 [Drosophila erecta]
 gi|190652900|gb|EDV50143.1| GG14779 [Drosophila erecta]
          Length = 1150

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 305/932 (32%), Positives = 492/932 (52%), Gaps = 88/932 (9%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K E F  +LEE  S +  + Y D   + +  L+ L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTEDFVLLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKREL 109

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 110 FMKATNLYTSADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 169

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 170 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQ 229

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 230 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 289

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 290 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQ--IAPANFVLPHYGL 347

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 348 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQ 407

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  
Sbjct: 408 FPEDIEAWIELAQILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNL 467

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           + A  + + AL           K  T  +D        KD++ +   +            
Sbjct: 468 KMAKDTLESAL-----------KHATSEMD--------KDVKYYESIQ------------ 496

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 497 VTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 556

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     +     D+Y+ ++LGN++    L
Sbjct: 557 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTL 615

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+E
Sbjct: 616 HQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVRE 675

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A
Sbjct: 676 ATA-----DFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRA 730

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  + K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 731 NKLVEAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVHELELAQ 790

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R+
Sbjct: 791 KYFQYLS------VHG-DKNRFNIEVAGIEANTCQDLLSQAQYHVGRARRIDEEERSLRR 843

Query: 831 RQEAARQA---ALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTP 887
           +QE  R+A    +AE+ +R+ EE K             + L +++E+ ++ K     +  
Sbjct: 844 KQEEEREAFKVKVAEQRKRREEEAKT---------SRDQLLAKRQEYVEKTKNMLIIADS 894

Query: 888 ASKRRERSENDDDEVGHSEKRRRKGGKRRKKD 919
           A                 EK R+KGG R +KD
Sbjct: 895 A----------------PEKDRKKGGGRARKD 910


>gi|324502334|gb|ADY41027.1| RNA polymerase-associated protein CTR9 [Ascaris suum]
          Length = 1143

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 271/793 (34%), Positives = 443/793 (55%), Gaps = 53/793 (6%)

Query: 5   YFKQGKVEQFRQILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           Y+++G    F +ILE  GS   +D  YA+   +++  L+ L  YY      E  + +K+E
Sbjct: 58  YYRRGNEADFVRILELSGSEANLD--YAEYPRDQMRALDTLAAYYVMQNHKERNKEKKKE 115

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
               AT  Y  A +I M++ +  +G+    L +G+ +QA   F  VL    +N+PA+LG+
Sbjct: 116 WQTKATLLYTTADKIIMYDTNHLLGRAYFCLLEGKTDQAEQQFNFVLNQVGENIPAMLGK 175

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ F +  Y  SL  YK  L+  P CP  +RLGIG C  KLG++ KAR AF+R L+L+P
Sbjct: 176 ACIFFQKKEYRKSLNCYKSVLRKKPDCPADVRLGIGYCLSKLGKVEKARLAFERVLELEP 235

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           +NV AL+ALA++D+   +A GI+ G++ + RA++I     + LN+LANHFF+      VE
Sbjct: 236 QNVHALIALAILDMNNLDAEGIQNGVQSLGRAYQIDQENPVVLNHLANHFFYRNDMDRVE 295

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A  +T +   ++ S Y LARS+H +G++EKA  +Y  +  +   P  F+ PY+GL
Sbjct: 296 HLAWHAFQITENEAMRAESCYQLARSFHQRGNFEKAFQHYYQAT-QFATP-SFVLPYFGL 353

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------QLGQIE---KAQELL 354
           GQ+ +   D  +A+T FEKVL++YP N +TLK LG +Y       Q  +IE   KA+E+L
Sbjct: 354 GQMYIHREDLDNAITCFEKVLKLYPSNYDTLKVLGSLYAHSEPAEQQEKIERRKKAKEML 413

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIH 413
           +K  ++ P D +A I+L +L  SSD  A+LDA+  A   L+K  E +VP E+ NNIG + 
Sbjct: 414 KKVVEMCPEDVEALIELAQLTESSDPQASLDAYTKASEFLEKTLEVDVPPEITNNIGSLC 473

Query: 414 FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 473
           F  G++E A +SF+ A             ++    D +A       +Q            
Sbjct: 474 FSMGQYEKAKKSFELA-------------SRKLAEDIAAGQSDLAALQ------------ 508

Query: 474 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
                  TV +NLAR +E +     A  LY+ IL + Q+Y+D Y+RL  +A+ +  +  S
Sbjct: 509 ------TTVTYNLARCMEMLCLFDEAERLYKGILHEKQNYIDCYMRLGCLARDKGQIYES 562

Query: 534 IELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLGNW 592
                EA+ V+  + +A S++G+L +   +W  A++ F       +   D Y+ ++LGN 
Sbjct: 563 SVWFKEAMSVSQTHADAWSLIGNLHMSKCEWAPAQKKFEYILKLNEYHNDPYSLVALGNV 622

Query: 593 NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 652
            +   L +  R  + +  + E+A  +Y++ +  H  N++AANG G +LA+KG    ++D+
Sbjct: 623 -WLETLSSVHRKREKDKDYRERALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEARDI 681

Query: 653 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 712
           F QV+EA +        DVW+N+AH+Y  Q  +  A++MY NC++KF    D  ++ Y+A
Sbjct: 682 FAQVREATA-----DFWDVWVNIAHIYMEQKQYVSAIQMYDNCMKKFRRYNDVALMQYMA 736

Query: 713 RTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVA 772
           R +Y+A +  DC+  L +A+  AP N  ++F+    +QK +  TL+  + + + V   V 
Sbjct: 737 RAYYKAGKLDDCRHMLEKAMCEAPDNLMVKFNYAFVLQKLATQTLRDEKSSLEMVTGAVE 796

Query: 773 ELENAVRVFSHLS 785
           +L+ A R+F+++S
Sbjct: 797 DLKTAERIFTYIS 809


>gi|28574254|ref|NP_788449.1| CG2469, isoform B [Drosophila melanogaster]
 gi|28574256|ref|NP_788448.1| CG2469, isoform A [Drosophila melanogaster]
 gi|7292059|gb|AAF47472.1| CG2469, isoform B [Drosophila melanogaster]
 gi|17862386|gb|AAL39670.1| LD24034p [Drosophila melanogaster]
 gi|23092752|gb|AAN11469.1| CG2469, isoform A [Drosophila melanogaster]
 gi|220947488|gb|ACL86287.1| CG2469-PA [synthetic construct]
          Length = 1150

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 297/876 (33%), Positives = 474/876 (54%), Gaps = 66/876 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K E F  +LEE  S +  + Y D   + +  L+ L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKREL 109

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 110 FMKATNLYTSADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 169

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 170 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQ 229

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 230 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 289

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 290 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQ--IAPANFVLPHYGL 347

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 348 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQ 407

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L A+ TA ++L+ KA  E+P E+ NN+  +H+  G  
Sbjct: 408 FPEDIEAWIELAQILEQNDLQASLSAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNL 467

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           + A  + + AL           K  T  +D        KD++ +   +            
Sbjct: 468 KMAKLTLESAL-----------KHATSEMD--------KDVKYYESIQ------------ 496

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 497 VTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 556

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     + +   D+Y+ ++LGN++    L
Sbjct: 557 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPSTSTDAYSLIALGNFS-LQTL 615

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+E
Sbjct: 616 HQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVRE 675

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A
Sbjct: 676 ATAD-----FCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRA 730

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  D K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 731 NKLVDAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVHELELAQ 790

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R+
Sbjct: 791 KYFQYLS------VHG-DKNRFNIEVAGIEASTCQDLLSQAQYHVGRARRIDEEERSLRR 843

Query: 831 RQEAARQA---ALAEEARRKAEEQKKY---LLEKRK 860
           +QE  R+A    +AE+ +R+ EE K     LL KR+
Sbjct: 844 KQEEEREAFKIKVAEQRKRREEEAKTSRDQLLAKRQ 879


>gi|321453432|gb|EFX64668.1| hypothetical protein DAPPUDRAFT_204585 [Daphnia pulex]
          Length = 1195

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 299/951 (31%), Positives = 503/951 (52%), Gaps = 71/951 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY  Q K+  F ++LE  S  E +  Y D   +++  L+ L  +Y      E  + +K E
Sbjct: 48  EYNNQNKIADFVKVLE-ASRTESNMNYKDSEKDQMKALDTLAAHYVQQANREKNKDKKRE 106

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A +I M++ +  +G+  L L +G+ ++QA + F  VL    DN+P+LLG
Sbjct: 107 LFTKATHLYTTADKIIMYDQNHLLGRAYLCLLEGDKMDQADAQFNFVLNQSPDNIPSLLG 166

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  Y  +L +YK+AL+ + +CP  +RLG+G C  KLG   KAR AF+RAL LD
Sbjct: 167 KACISFNKKDYKAALAYYKKALRTNATCPAGVRLGMGHCFLKLGNADKARLAFERALDLD 226

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P+ V ALV +A+++L   E+  IR G++ + RA+ +     M LN+LANHFFF   +  V
Sbjct: 227 PKCVGALVGMAILELNLQESDSIRNGVQLLSRAYAVDSSNPMVLNHLANHFFFKKDYSKV 286

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   A   T +   ++ S Y +AR++H +GDY++A  YY  + +  +    FI P++G
Sbjct: 287 QHLALHAFHNTENEAMRAESCYQMARAFHVQGDYDQAFQYYYQATQFAST--NFILPHFG 344

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A   FE+VL+  P N ET+K LG +Y       K   A+  L+K  +
Sbjct: 345 LGQMYIYRGDTENAAQCFERVLKAQPGNYETMKILGSLYAASSSQSKRDIAKTHLKKVTE 404

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  SD   +L A+ TA  +LK K   ++P E+LNN+G +++  G 
Sbjct: 405 QFPDDVEAWIELAQILEQSDLQGSLSAYSTAMKILKEKVQADIPPEILNNVGALYYRLGN 464

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            E + + F+ ++           + K+     + +    ++ Q+ +              
Sbjct: 465 LEESRKYFEQSI----------ERAKSDAEQETPAENSEQEPQVENAI------------ 502

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            VT  +NL R+ E +     A   Y+  L ++ +YVD YLRL  +A+ R  +  + +   
Sbjct: 503 CVTTNYNLGRIYEGLFLCDKAEKNYKDTLKEHPNYVDCYLRLGCMARDRGQIYEASDWFK 562

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAA 597
           EAL++N ++P+A S++G+L L   +W   ++ F R         DSY+ ++LGN  +   
Sbjct: 563 EALQINNEHPDAWSLIGNLHLAKMEWGPGQKKFERILKQPATATDSYSLIALGNV-WLQT 621

Query: 598 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
           L    R  + E  H ++A  LY  V+     N++AANG G VLA KG    ++D+F  V+
Sbjct: 622 LHVPTRDKEKEKRHQDRALTLYKTVLKNDHRNIWAANGIGCVLAHKGCIPEARDIFASVR 681

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           EA +        DVW+N+AH+Y  Q  +  A++MY+NC+RKF+ +   +IL YL+R H+ 
Sbjct: 682 EATA-----DFSDVWLNIAHIYVEQKQYVSAIQMYENCIRKFFRHPHVEILQYLSRAHFR 736

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 777
           A + ++ K SLL+A H+AP +  L F+  + +Q+ +   L+  +     V   V+EL+ +
Sbjct: 737 AGKLREAKLSLLKAQHVAPHDTVLLFNTALVLQRLATQILKDEKSDLQTVLQAVSELQLS 796

Query: 778 VRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIH----REAAEREEQQNRQRQE 833
            + F  LS   N     +D         +C  LL  A+ H    R  AE EE++ R++QE
Sbjct: 797 HKFFQWLSV--NGDRMRYDLAFAAAEARHCGDLLSQAQYHVARARSLAE-EEKRMRKKQE 853

Query: 834 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRE 893
             R      EA R  + ++++ LE+ + ++++K L+ +EE  ++ K+  + +   S++ E
Sbjct: 854 EER------EAFRTKQREEQHRLEESRRQEQEKLLKLREEFIEKTKKATQFNEMPSEKAE 907

Query: 894 ---------------------RSENDDDEVGHSEKRRRKGGKRRKKDKSSR 923
                                R ++ D+  G   K+R+   K R+ +  SR
Sbjct: 908 KGKKSRKKKDDEDGFVTDGSDRIQSGDEGAGPPSKKRKAERKPRQTETKSR 958


>gi|195336539|ref|XP_002034893.1| GM14398 [Drosophila sechellia]
 gi|194127986|gb|EDW50029.1| GM14398 [Drosophila sechellia]
          Length = 1152

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 296/876 (33%), Positives = 475/876 (54%), Gaps = 66/876 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K E F  +LEE  + +  + Y D   + +  L+ L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTEDFVTLLEESRNDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKREL 109

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 110 FMKATNLYTSADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 169

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 170 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQ 229

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 230 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 289

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 290 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQ--IAPANFVLPHYGL 347

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 348 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQ 407

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L A+ TA ++L+ KA  E+P E+ NN+  +H+  G  
Sbjct: 408 FPEDIEAWIELAQILEQNDLQASLSAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNL 467

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           + A ++ + AL           K  T  +D        KD++ +   +            
Sbjct: 468 KMAKRTLESAL-----------KHATSEMD--------KDVKYYESIQ------------ 496

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 497 VTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 556

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     + +   D+Y+ ++LGN++    L
Sbjct: 557 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPSTSTDAYSLIALGNFS-LQTL 615

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+E
Sbjct: 616 HQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVRE 675

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A
Sbjct: 676 ATAD-----FCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRA 730

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  D K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 731 NKLVDAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVHELELAQ 790

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R+
Sbjct: 791 KYFQYLS------VHG-DKNRFNIEVAGIEASTCQDLLSQAQYHVGRARRIDEEERSLRR 843

Query: 831 RQEAARQA---ALAEEARRKAEEQKKY---LLEKRK 860
           +QE  R+A    +AE+ +R+ EE K     LL KR+
Sbjct: 844 KQEEEREAFKIKVAEQRKRREEEAKTSRDQLLAKRQ 879


>gi|26333645|dbj|BAC30540.1| unnamed protein product [Mus musculus]
          Length = 769

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/764 (36%), Positives = 434/764 (56%), Gaps = 54/764 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 725

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTL 757
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L
Sbjct: 726 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVL 769


>gi|241176305|ref|XP_002399529.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis]
 gi|215495156|gb|EEC04797.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis]
          Length = 1095

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 299/912 (32%), Positives = 481/912 (52%), Gaps = 71/912 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY++QGKVE F ++LE G + E    Y D   +++  L+ L  YY +    E  +  K E
Sbjct: 49  EYYRQGKVEDFVRLLEAGRT-EARLDYGDFEQDQMTCLDTLAAYYVHKASREKSKDRKHE 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A +I M+  +  +G+    L +G+ ++QA + F  VL    +N+P+LLG
Sbjct: 108 LFTKATLLYTTADKIIMYTQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  Y  +L FYK+AL+ +P+CP  +RLG+G C Y+LG+  KAR AF+RAL LD
Sbjct: 168 KACIAFNKKDYRGALAFYKKALRTNPNCPAEVRLGMGHCFYRLGKQEKARAAFERALALD 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P+ V AL  LAV+ L        R G++ + RA+ + P C + LN LANHFFF   +  V
Sbjct: 228 PQCVGALAGLAVLQLNLKGPEATRTGVQMLSRAYAVDPSCPVVLNQLANHFFFKKDYGKV 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   A   T +   ++ S Y LARS+H + D+++A  YY  + +    P  F+ P++G
Sbjct: 288 QHLALHAFHNTENEAMRAESCYQLARSFHVQEDFDQAFQYYYQATQ--FAPTSFVLPHFG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  L+K  +
Sbjct: 346 LGQMYIFRGDVDNAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDQAKTHLKKVTE 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  SD  AAL A+ TA  LL+ K   ++P E+L+N+G +HF  G 
Sbjct: 406 QFPEDVEAWIELAQILEQSDVQAALSAYGTATRLLQDKVKADIPPEILSNVGALHFRMGN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A + ++ +L           +++T                     E+  +       
Sbjct: 466 LQEARRYYEASL----------ERSRT---------------------ESGNDEHYYGSI 494

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            VT  +NLARL E +     A   Y+ IL ++ +YVD YLRL  +A+ R  +  + +   
Sbjct: 495 SVTTTYNLARLYEALSLFDRAEQAYKNILREHPNYVDCYLRLGCMARDRGQIYEASDWFK 554

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAAL 598
           EAL+VN ++P++ S++G+L L   +W   ++ F        G D+Y+ ++LGN  +   L
Sbjct: 555 EALQVNQEHPDSWSLIGNLHLAKQEWGPGQKKFERILKGAPG-DAYSLVALGN-VWLQTL 612

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R    E  H ++A  +Y +V+     N++AANG G VLA KG    S+D+F QV+E
Sbjct: 613 HQPMRDRDKERRHQDRALAMYKQVLRLDPRNIWAANGVGAVLAHKGYISESRDIFAQVRE 672

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AH+Y  Q  +  A++MY+NC     ++      L+        
Sbjct: 673 ATA-----DFCDVWLNIAHIYVEQKQYVAAIQMYENCCASLRHHQRGHPDLWGGLCS-AC 726

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            + ++CK+ LLRA  +AP +  L ++  + +Q+ +A  L+  + +   V S V EL  A 
Sbjct: 727 NRLRECKRILLRARRVAPQDTLLLYNIALVLQRLAAQCLRDDKSSLATVLSAVHELGLAH 786

Query: 779 RVFSHLSAASNLHLHG----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQR 831
           R F +LS      +HG    +D  +       C+ LL  A+ H   A R   EE++ R++
Sbjct: 787 RYFQYLS------VHGDRMKYDLAQAAIESRQCQDLLSQAQYHVARARRMDEEEREIRRK 840

Query: 832 QEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQ-----WRSST 886
           QE  R+A      RRK  E+++ +LE++K E E+  + +++E  ++ K +     +    
Sbjct: 841 QEEEREA-----LRRKISEEQR-ILEEQKQEQERAMIMKRQEFVEKSKSKLQFADFPEDK 894

Query: 887 PASKRRERSEND 898
           P  K + R   D
Sbjct: 895 PGKKSKGRKSQD 906


>gi|195170683|ref|XP_002026141.1| GL16176 [Drosophila persimilis]
 gi|194111021|gb|EDW33064.1| GL16176 [Drosophila persimilis]
          Length = 1180

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 294/876 (33%), Positives = 472/876 (53%), Gaps = 66/876 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K + F  +LE+   PE ++ Y D   + +  L+ L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTDDFVTLLEDSRGPEANKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKREL 109

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 110 FMKATNLYTNADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 169

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 170 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQ 229

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 230 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 289

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 290 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGL 347

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 348 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQSKRDMAKTHLKKVTEQ 407

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L A+ TA  +LK KA  E+P E+ NN+  +H+  G+ 
Sbjct: 408 FPDDIEAWIELAQILEQNDLAASLAAYGTASKILKDKAKYEIPAEIQNNVSSLHYRLGDL 467

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
             A    + AL   I  + +D                 KD++ +   +            
Sbjct: 468 IEAKVKLESALQHAI--SEMD-----------------KDVKYYESIQ------------ 496

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 497 VTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 556

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     +     D+Y+ ++LGN++    L
Sbjct: 557 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTL 615

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+E
Sbjct: 616 HQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVRE 675

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A
Sbjct: 676 ATA-----DFSDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRA 730

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  + K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 731 NKLVEAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAH 790

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R+
Sbjct: 791 KYFQYLS------VHG-DKNRFNIEVAGVEANTCQDLLSQAQYHVGRARRIDEEERSLRR 843

Query: 831 RQEAARQA---ALAEEARRKAEE---QKKYLLEKRK 860
           +QE  R+A    +AE+ +R+ EE    +  LL KR+
Sbjct: 844 KQEEEREAFKLKVAEQRKRREEEAQTSRDQLLAKRQ 879


>gi|198462498|ref|XP_001352454.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
 gi|198150850|gb|EAL29950.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
          Length = 1193

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 294/876 (33%), Positives = 472/876 (53%), Gaps = 66/876 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K + F  +LE+   PE ++ Y D   + +  L+ L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTDDFVTLLEDSRGPEANKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKREL 109

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 110 FMKATNLYTNADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 169

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 170 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQ 229

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 230 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 289

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 290 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGL 347

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 348 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQSKRDMAKTHLKKVTEQ 407

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L A+ TA  +LK KA  E+P E+ NN+  +H+  G+ 
Sbjct: 408 FPDDIEAWIELAQILEQNDLAASLAAYGTASKILKDKAKYEIPAEIQNNVSSLHYRLGDL 467

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
             A    + AL   I  + +D                 KD++ +   +            
Sbjct: 468 IEAKVKLESALQHAI--SEMD-----------------KDVKYYESIQ------------ 496

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 497 VTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 556

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     +     D+Y+ ++LGN++    L
Sbjct: 557 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTL 615

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+E
Sbjct: 616 HQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVRE 675

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A
Sbjct: 676 ATA-----DFSDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRA 730

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  + K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 731 NKLVEAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAH 790

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R+
Sbjct: 791 KYFQYLS------VHG-DKNRFNIEVAGVEANTCQDLLSQAQYHVGRARRIDEEERSLRR 843

Query: 831 RQEAARQA---ALAEEARRKAEE---QKKYLLEKRK 860
           +QE  R+A    +AE+ +R+ EE    +  LL KR+
Sbjct: 844 KQEEEREAFKLKVAEQRKRREEEAQTSRDQLLAKRQ 879


>gi|312080004|ref|XP_003142416.1| hypothetical protein LOAG_06832 [Loa loa]
          Length = 1397

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 327/1057 (30%), Positives = 531/1057 (50%), Gaps = 131/1057 (12%)

Query: 5    YFKQGKVEQFRQILE-EGS--SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 61
            Y+++G    F +ILE  GS  S E  EY+ D    ++  L+ L  YY      E  + +K
Sbjct: 296  YYRRGNEADFVRILEMSGSEASLEYPEYHQD----QMRALDTLAAYYVIQSHKERNKDKK 351

Query: 62   EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
            +E    AT  Y  A +I M++    +G+    L +G+++QA   F  VL    +N+PA L
Sbjct: 352  KEWQTKATLLYTTADKIIMYDTYHLLGRAYFCLLEGKIDQAEQQFNFVLNQVGENIPATL 411

Query: 122  GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
            G+AC+ F R  Y  +L  YK  L+  P CP  +RLGIG C  KLG+L KAR AF+R L L
Sbjct: 412  GKACIFFQRKEYRKALNCYKSVLRKMPDCPADVRLGIGYCLAKLGRLDKARLAFKRVLDL 471

Query: 182  DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
            D ENV ALVALA++D+   E   IR+G+E + RA++I     + LN+LANHFF+  +   
Sbjct: 472  DKENVSALVALAILDMNTLEQEAIRRGVESLGRAYQIEQENPVVLNHLANHFFYKKELDR 531

Query: 242  VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            VE L   A  +T++   ++ S Y LARS+H +G++EKA  +Y  S +       F+ PY+
Sbjct: 532  VEHLAWHAFQITDNEAMRAESCYQLARSFHQRGNFEKAFQHYYQSTQFATA--NFVLPYF 589

Query: 302  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIE------KAQE 352
            GLGQ+ +   D+ +A+  FEKVL+  P N +TLK LG +Y       Q E      KA+E
Sbjct: 590  GLGQMYIYREDYDNAIQCFEKVLKGCPTNYDTLKILGSLYAHSEPANQKERSERRKKARE 649

Query: 353  LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGV 411
            + +K  ++ P D +A IDL +L  + D   +LDA+  A T L +  E +VP E+ NN+G 
Sbjct: 650  IFKKVVEMCPDDVEALIDLAQLTENCDPQGSLDAYTKASTFLSQMIEVDVPPEITNNVGS 709

Query: 412  IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
            ++F  G++E A + F++AL +      L     T   D +A  LQ               
Sbjct: 710  LYFTIGQYEKAREYFEEALKE------LGEVVSTGQTDLAA--LQ--------------- 746

Query: 472  HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
                     TV +NLAR LE +     A  LY+ IL +  +Y+D Y+RL  +A+ +  + 
Sbjct: 747  --------TTVTYNLARSLEMLCMFDEAERLYKGILQEKPNYIDCYMRLGCLARDKGQIY 798

Query: 532  LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLG 590
             S     E + VN  + +A S++G+L +   +W  A++ F       +   D Y+ ++LG
Sbjct: 799  ESSVWFKEGMSVNQSHADAWSLIGNLHMSKFEWAPAQKKFEYILKLPEYHDDPYSFVALG 858

Query: 591  NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 650
            N  +   L +  R  + +  + E+A  +Y++ +  H  N++AANG G +LA+KG    ++
Sbjct: 859  NI-WLETLSSIHRKKEKDKDYRERALMMYSKALKVHPRNIWAANGIGCILAQKGAIQEAR 917

Query: 651  DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 710
            D+F QV+EA +        DVW+N+AHVY  Q  +  A++MY NC++KF  + D  +LLY
Sbjct: 918  DIFAQVREATA-----DFSDVWVNIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVSLLLY 972

Query: 711  LARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRST 770
            LAR HY+A ++ +C+  L +AI  AP N  L+F+    +QK +   L+  + + + V   
Sbjct: 973  LARAHYKAGKFTECRHILEKAICEAPDNMMLKFNHAFVLQKLATQMLRDDKSSLEMVTGA 1032

Query: 771  VAELENAVRVFSHLSAASNLHLHG---FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQ 827
            V +L  A  +F ++S   +  +            +    C  LL  A+ + + A+ ++++
Sbjct: 1033 VDDLRTAATIFEYISRNKDDTMSQARVVSRTASASEARACYDLLTQAQTYLQRAKAQDEE 1092

Query: 828  NRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQ-KRLRQQEEHFQRVKEQWRSST 886
             +++++   +   A   +R+ E++ K   EK + E E  K++RQ  E+ ++ KE  R  T
Sbjct: 1093 EQRQRQRQEEERQA--LKRQQEQEAKEREEKARRELEVLKQMRQ--EYVEKTKEILRLPT 1148

Query: 887  PASKRRERSE-------------NDDDEVG------------------------------ 903
               ++R R               NDD ++G                              
Sbjct: 1149 IVEEKRVRGSGRRRKDREGDEFVNDDSDLGDWNAAEGGEPRKKKERRGRKKRERREVSSG 1208

Query: 904  -------HSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIG 956
                    +E R R+ G++ KK +   S +E    +   +  RE  + +++S        
Sbjct: 1209 GSGGEMDEAESRNRREGRKSKKMRFDHSDFELSAKQKMKVKSREFVQSDESS-------- 1260

Query: 957  QMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITA 993
                 D DV + +  RL+    +DSDV     P+ TA
Sbjct: 1261 ----SDGDVNKPSKSRLS----DDSDVAGSPGPTKTA 1289


>gi|195995661|ref|XP_002107699.1| hypothetical protein TRIADDRAFT_19990 [Trichoplax adhaerens]
 gi|190588475|gb|EDV28497.1| hypothetical protein TRIADDRAFT_19990 [Trichoplax adhaerens]
          Length = 911

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 307/920 (33%), Positives = 486/920 (52%), Gaps = 66/920 (7%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           + ++Y+K G+ + F  +LE  ++ E    Y D   + +  L++L  YY  LGK    +  
Sbjct: 48  LAQQYYKLGEQDAFLSMLETATT-EATMSYDDSDKDLMTTLDSLANYYVELGKKANNKDL 106

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL-EADRDNVPA 119
             ++F  A Q + K  +I MH     V +G   LA G++EQA + F  VL + ++ N PA
Sbjct: 107 TRDYFAKAAQLFGKGDKIIMHHEGHLVSRGCFYLADGKLEQAETQFNFVLTQLNKQNPPA 166

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
           LLG+A + F+R  Y+ +L  YK  L++ P +C   +RLGIG C  KL +L  AR+AF+RA
Sbjct: 167 LLGKASILFSRKDYNGALSLYKEVLKLKPETCRADVRLGIGHCYAKLNKLNLARRAFERA 226

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           LQLDP  V A+VALAV++L  N A  IR G++ + RA+ I    AM LN+LANHFF+   
Sbjct: 227 LQLDPRCVGAMVALAVLELNNNRAESIRNGVDLLSRAYTIDQTNAMVLNHLANHFFYKKD 286

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
              V+ L   A   TN  P ++ S Y LAR +HS  DY++A  YY  + +  +    ++ 
Sbjct: 287 FNKVQHLALHAFHSTNVEPIQAESCYQLARVFHSMQDYDQAFKYYYQATQFADS--NYVL 344

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLR 355
           P++GLGQ+ L   D  +A ++FEKVL++  DN E++K LG IY +    EK   A+ LL+
Sbjct: 345 PHFGLGQLYLARNDPTNAASSFEKVLKVQSDNYESMKILGSIYARSNNEEKRERAKILLQ 404

Query: 356 KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHF 414
           KA    P D +A+I+L  +L  SD   AL A+ T+  LL++  E + P E+LNN+  +HF
Sbjct: 405 KATTQHPDDIEAWIELAGILEGSDIQGALSAYGTSSRLLQETLETDTPPEILNNVAALHF 464

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 474
           + G    A ++F  AL           + K    +++     F  +              
Sbjct: 465 KLGNLLEAMKNFSAAL----------ERAKLEANESTEGSSYFNTI-------------- 500

Query: 475 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
                VT+ +N+ARL E + +   A  LY+ IL  + +Y+D YLRL  +A+ + +   + 
Sbjct: 501 ----SVTITYNVARLHEALCEHDEAEKLYKQILKDHPNYIDCYLRLGCMARDKGHFYEAS 556

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL +  ++ +  S++G+L +   +W  A++ + R  +   D  D+Y  +++GN  
Sbjct: 557 DWYTEALVIEREHKDTWSLIGNLHMMKQEWGPAQKKYERILNQNKD--DTYGLVAMGNI- 613

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    + P     H ++A  LY +VI     N+YAANG G VLA+      S+++F
Sbjct: 614 WLQTLYQPTKDPDKNRRHRDRALSLYKQVIRLDPRNIYAANGIGAVLAQSSFHQESREIF 673

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            QV+EA +      M DVW+NLAHVY  Q  ++ A++MYQNC+++F  N   ++LLYLAR
Sbjct: 674 AQVREATA-----DMFDVWLNLAHVYTEQKQYSTAIQMYQNCIKRFGKNQSTEVLLYLAR 728

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK +L++A H+AP    L FD  + +Q+ +  +L+       +V+  V +
Sbjct: 729 VFFKDGRLQNCKSALVKACHVAPQETLLLFDVCLVLQRIATVSLKDENSNLKDVQEAVDQ 788

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 833
           L+ A R F+ LS   +     FD  +       C  LL  AK H   A++++ +      
Sbjct: 789 LKLAHRYFTFLSKVGD--KSKFDLNQAQLEARQCVDLLSQAKYHVSRAKKKQDEEL---- 842

Query: 834 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQR--VKEQWRSSTPASKR 891
                    E  RK EE+ +  LEKRK E+ Q   RQ+EE  +   + E+      A+K+
Sbjct: 843 ---------ELIRKQEEEHQAYLEKRKAEEIQ---RQKEEEVKNKSINEKRSQFIEATKK 890

Query: 892 RERSENDDDEVGHSEKRRRK 911
               E D         RR K
Sbjct: 891 LLVFEADTSSAAKISGRRAK 910


>gi|393907253|gb|EFO21654.2| hypothetical protein LOAG_06832 [Loa loa]
          Length = 1183

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 327/1057 (30%), Positives = 531/1057 (50%), Gaps = 131/1057 (12%)

Query: 5    YFKQGKVEQFRQILE-EGS--SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 61
            Y+++G    F +ILE  GS  S E  EY+ D    ++  L+ L  YY      E  + +K
Sbjct: 82   YYRRGNEADFVRILEMSGSEASLEYPEYHQD----QMRALDTLAAYYVIQSHKERNKDKK 137

Query: 62   EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
            +E    AT  Y  A +I M++    +G+    L +G+++QA   F  VL    +N+PA L
Sbjct: 138  KEWQTKATLLYTTADKIIMYDTYHLLGRAYFCLLEGKIDQAEQQFNFVLNQVGENIPATL 197

Query: 122  GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
            G+AC+ F R  Y  +L  YK  L+  P CP  +RLGIG C  KLG+L KAR AF+R L L
Sbjct: 198  GKACIFFQRKEYRKALNCYKSVLRKMPDCPADVRLGIGYCLAKLGRLDKARLAFKRVLDL 257

Query: 182  DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
            D ENV ALVALA++D+   E   IR+G+E + RA++I     + LN+LANHFF+  +   
Sbjct: 258  DKENVSALVALAILDMNTLEQEAIRRGVESLGRAYQIEQENPVVLNHLANHFFYKKELDR 317

Query: 242  VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            VE L   A  +T++   ++ S Y LARS+H +G++EKA  +Y  S +       F+ PY+
Sbjct: 318  VEHLAWHAFQITDNEAMRAESCYQLARSFHQRGNFEKAFQHYYQSTQFATA--NFVLPYF 375

Query: 302  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIE------KAQE 352
            GLGQ+ +   D+ +A+  FEKVL+  P N +TLK LG +Y       Q E      KA+E
Sbjct: 376  GLGQMYIYREDYDNAIQCFEKVLKGCPTNYDTLKILGSLYAHSEPANQKERSERRKKARE 435

Query: 353  LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGV 411
            + +K  ++ P D +A IDL +L  + D   +LDA+  A T L +  E +VP E+ NN+G 
Sbjct: 436  IFKKVVEMCPDDVEALIDLAQLTENCDPQGSLDAYTKASTFLSQMIEVDVPPEITNNVGS 495

Query: 412  IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
            ++F  G++E A + F++AL +      L     T   D +A  LQ               
Sbjct: 496  LYFTIGQYEKAREYFEEALKE------LGEVVSTGQTDLAA--LQ--------------- 532

Query: 472  HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
                     TV +NLAR LE +     A  LY+ IL +  +Y+D Y+RL  +A+ +  + 
Sbjct: 533  --------TTVTYNLARSLEMLCMFDEAERLYKGILQEKPNYIDCYMRLGCLARDKGQIY 584

Query: 532  LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLG 590
             S     E + VN  + +A S++G+L +   +W  A++ F       +   D Y+ ++LG
Sbjct: 585  ESSVWFKEGMSVNQSHADAWSLIGNLHMSKFEWAPAQKKFEYILKLPEYHDDPYSFVALG 644

Query: 591  NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 650
            N  +   L +  R  + +  + E+A  +Y++ +  H  N++AANG G +LA+KG    ++
Sbjct: 645  NI-WLETLSSIHRKKEKDKDYRERALMMYSKALKVHPRNIWAANGIGCILAQKGAIQEAR 703

Query: 651  DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 710
            D+F QV+EA +        DVW+N+AHVY  Q  +  A++MY NC++KF  + D  +LLY
Sbjct: 704  DIFAQVREATA-----DFSDVWVNIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVSLLLY 758

Query: 711  LARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRST 770
            LAR HY+A ++ +C+  L +AI  AP N  L+F+    +QK +   L+  + + + V   
Sbjct: 759  LARAHYKAGKFTECRHILEKAICEAPDNMMLKFNHAFVLQKLATQMLRDDKSSLEMVTGA 818

Query: 771  VAELENAVRVFSHLSAASNLHLHG---FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQ 827
            V +L  A  +F ++S   +  +            +    C  LL  A+ + + A+ ++++
Sbjct: 819  VDDLRTAATIFEYISRNKDDTMSQARVVSRTASASEARACYDLLTQAQTYLQRAKAQDEE 878

Query: 828  NRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQ-KRLRQQEEHFQRVKEQWRSST 886
             +++++   +   A   +R+ E++ K   EK + E E  K++RQ  E+ ++ KE  R  T
Sbjct: 879  EQRQRQRQEEERQA--LKRQQEQEAKEREEKARRELEVLKQMRQ--EYVEKTKEILRLPT 934

Query: 887  PASKRRERSE-------------NDDDEVG------------------------------ 903
               ++R R               NDD ++G                              
Sbjct: 935  IVEEKRVRGSGRRRKDREGDEFVNDDSDLGDWNAAEGGEPRKKKERRGRKKRERREVSSG 994

Query: 904  -------HSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIG 956
                    +E R R+ G++ KK +   S +E    +   +  RE  + +++S        
Sbjct: 995  GSGGEMDEAESRNRREGRKSKKMRFDHSDFELSAKQKMKVKSREFVQSDESS-------- 1046

Query: 957  QMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITA 993
                 D DV + +  RL+    +DSDV     P+ TA
Sbjct: 1047 ----SDGDVNKPSKSRLS----DDSDVAGSPGPTKTA 1075


>gi|195441399|ref|XP_002068497.1| GK20387 [Drosophila willistoni]
 gi|194164582|gb|EDW79483.1| GK20387 [Drosophila willistoni]
          Length = 1185

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 293/876 (33%), Positives = 474/876 (54%), Gaps = 66/876 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K E F  +LEE       + Y D   + +  L+ L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTEDFVTLLEESRGTCATKDYRDSDKDSMRALDMLAAHYVQEAYREKSKDKKREL 109

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 110 FMKATNLYTSADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 169

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 170 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNPVKAKLAFERALQLDQ 229

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 230 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 289

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 290 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQ--IAPANFVLPHYGL 347

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 348 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQ 407

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  
Sbjct: 408 FPEDIEAWIELAQILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNL 467

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           + A  + + AL              T  +D        KD++ +   +            
Sbjct: 468 KMAKDTLESALQHA-----------TSEMD--------KDVKYYESIQ------------ 496

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 497 VTMKYNLARLNEAMSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 556

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     + +   D+Y+ ++LGN++    L
Sbjct: 557 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPSTSTDAYSLIALGNFS-LQTL 615

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++AANG G VLA KG    ++D+F QV+E
Sbjct: 616 HQPSRDKEKERKHQEKALAIFKQVLRNDCRNIWAANGIGAVLAHKGCVIEARDIFAQVRE 675

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +     +  DVW+N+AH+Y  Q  +  A++MY+NC++KF+ + + +++ YLAR +  A
Sbjct: 676 ATA-----EFCDVWLNIAHIYVEQKQYISAIQMYENCMKKFFKHNNVEVMQYLARAYLRA 730

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  + K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 731 NKLVEAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVNELELAH 790

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R+
Sbjct: 791 KYFQYLS------VHG-DKTRFNIEVAGIEANTCQDLLSQAQYHVGRARRIDEEERSLRR 843

Query: 831 RQEAARQA---ALAEEARRKAEEQKKY---LLEKRK 860
           +QE  R+A    +AE+ +R+ EE K     LL KR+
Sbjct: 844 KQEEEREAFKLKVAEQRKRREEEAKTSRDQLLAKRQ 879


>gi|195014701|ref|XP_001984064.1| GH15212 [Drosophila grimshawi]
 gi|193897546|gb|EDV96412.1| GH15212 [Drosophila grimshawi]
          Length = 1192

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 296/877 (33%), Positives = 475/877 (54%), Gaps = 69/877 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSP-EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           Y+KQ K + F  +LE       +D  Y D + +++  L+ L  +Y      E  + +K E
Sbjct: 50  YYKQKKTDDFIMLLEAAREKGTVD--YRDFKTDQMRALDMLAAHYVQEAYREKSKDKKRE 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG
Sbjct: 108 LFMKATNLYTNADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD
Sbjct: 168 KACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERALQLD 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
            + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V
Sbjct: 228 QQCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKV 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
             L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YG
Sbjct: 288 HHLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQ--IAPANFVLPHYG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  +
Sbjct: 346 LGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTE 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +++  G 
Sbjct: 406 QFPEDIEAWIELAQILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLYYRLGN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A  + + AL                   AS+ M   KD++ +   +           
Sbjct: 466 LKMAKHTLESALK-----------------HASSEM--DKDVKYYESIQ----------- 495

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   
Sbjct: 496 -VTMKYNLARLNEAMSSFDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFK 554

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAA 597
           +AL +N   P+A S+LG+L L    +   ++ F     +   G DSY+ ++LGN++    
Sbjct: 555 DALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPATGSDSYSLIALGNFS-LQT 613

Query: 598 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
           L    R  + E  H EKA  +Y +V+     N++A NG G VLA KG    ++D+F QV+
Sbjct: 614 LHQPSRDKEKERKHQEKALAIYKQVLRTDPRNIWATNGIGAVLAHKGCVIEARDIFAQVR 673

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           EA +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  
Sbjct: 674 EATA-----DFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLR 728

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 777
           A +  + K  LLRA  +AP +  L F+  V + + + + L+  + T + V   V ELE A
Sbjct: 729 ANKLVEAKSVLLRARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELA 788

Query: 778 VRVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNR 829
            + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R
Sbjct: 789 HKYFQYLS------VHG-DKTRFNIEVAAVEANTCQDLLSQAQYHVGRARRIDEEERTLR 841

Query: 830 QRQEAARQA---ALAEEARRKAEE---QKKYLLEKRK 860
           +RQE  R+A    +AE+ +++ EE    +  LL KR+
Sbjct: 842 RRQEDEREAFKLKIAEQRKKREEEAQSSRDQLLAKRQ 878


>gi|328868476|gb|EGG16854.1| RNA polymerase II complex component [Dictyostelium fasciculatum]
          Length = 1047

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 304/926 (32%), Positives = 521/926 (56%), Gaps = 86/926 (9%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+KQ  ++ F+ +L     P  +E+Y D ++ERIA+LNA+  YYT LG +E  + +KE+
Sbjct: 81  EYYKQNHIDDFKTLLGIALDPAAEEFYKDSKFERIAMLNAMASYYTQLGNVEKDKGKKED 140

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN------- 116
           ++  AT  + KA RID  +P T++GK  LLLAKGEV++A+  F+  L A  +        
Sbjct: 141 YYQEATYRFTKADRIDPRQPLTFIGKAALLLAKGEVDRAALNFQQALSASSNTHNSNTST 200

Query: 117 ----VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
                PA LG +CV FN+G  + ++E  ++ L  +P    ++RLG+G C YKLG++  A+
Sbjct: 201 TLPLFPAKLGYSCVLFNKGEINKAVESLQKLLIQNP-VSASVRLGLGYCFYKLGKIEAAK 259

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 232
           +AFQR L++D +NV+ALVALA +     +   I  GM+ + +A+E+ P   + LN LANH
Sbjct: 260 KAFQRVLEIDLDNVDALVALATIHTNQGD---IDTGMKLIVQAYELAPNNPIVLNQLANH 316

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEIN 291
           FF+ G +  V  L + A++ T+    K+ + Y +A++YH+   + +A   Y+ A++K   
Sbjct: 317 FFYKGDYTKVHALAQAAMSNTDINQIKAEASYIIAKAYHATDKWNEALQNYHQATLKS-- 374

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY---VQLGQIE 348
              +F    +GLGQV L   D+  A+  FE VLE  P+N E L+ LG +Y    Q   IE
Sbjct: 375 --PDFYLAQFGLGQVYLHNNDYEKAVGCFEAVLEKQPENYEALQILGSLYKVSSQSKNIE 432

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           K + +L K   ++P D+  +++L +LL SSD  ++LDA++    LLKK G E+  E+LNN
Sbjct: 433 KIKNVLMKTTLLNPNDSSNWLELAQLLESSDVSSSLDAYEKGINLLKKDGIEISTEILNN 492

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHRFE 467
           + V++  KG F +A +         ++L          VI+AS   L+ FK +       
Sbjct: 493 MAVLNHRKGSFSNAEK---------LYLK---------VIEASGHKLEDFKAVN------ 528

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
                       +T  +NLARL E ++    A  LY+ I+ ++ +Y+D YLRL AIAK+ 
Sbjct: 529 ------------ITTTYNLARLYESMNKFDQARQLYKGIIKEHPNYMDCYLRLGAIAKSE 576

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATL 587
            N   S E   EAL ++   P   S+ G L L N+ W  A++ F    +  +  D YA++
Sbjct: 577 GNSYESGEWYKEALNIDPNSPETWSLYGALHLSNEQWNHAQKKFEQILEVVNKNDPYASI 636

Query: 588 SLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 647
           +L N  YF A   + + P+    +L  A+  Y+R++ +H  N+YAANG G+V A K    
Sbjct: 637 ALANI-YFNA---KYQYPEKSEKYLSIAESFYSRILSRHNDNIYAANGLGMVAAAKNNLL 692

Query: 648 VSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ- 706
           ++ ++F Q++E+A     + +  + +NLAHVY ++  F  A+K+Y+  L+K     D + 
Sbjct: 693 LATEIFIQLRESA-----IDVSTISVNLAHVYMSRNLFDNAIKLYEGSLKKCNNTKDMEA 747

Query: 707 ILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADE 766
           I  YL++ ++ A ++Q+CK+ L +AIH +PSN  L ++  +A++  S + L+K  ++  E
Sbjct: 748 IYGYLSKAYFLARRYQECKQILKKAIHFSPSNLALWYNLALAIESQSMAILEKPNKSLPE 807

Query: 767 VRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCK-HLLDAAKIHREAAER-E 824
           V S   E+  A  +  +L +           +K N  V+ CK HLL   ++ ++  E  +
Sbjct: 808 VASVNREVVYARHLLMNLVSQKT--------QKPNYDVKRCKTHLLSLTELAKKVGEELK 859

Query: 825 EQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRS 884
             ++ + + A ++ + A EA+++A+E+      +R+ +++++  + +EE  QR+ E++R+
Sbjct: 860 SLEDLETENAKKRESAAVEAKKRADER------EREEKEQEEAKKAKEEEHQRMAEEYRA 913

Query: 885 STPASKRRERSENDDDEVGHSEKRRR 910
           S  A++  +  E  D++ G ++K++R
Sbjct: 914 SWNAARADKEREEKDEDYGSAKKKKR 939


>gi|402588814|gb|EJW82747.1| TPR Domain containing protein, partial [Wuchereria bancrofti]
          Length = 1028

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 306/934 (32%), Positives = 491/934 (52%), Gaps = 82/934 (8%)

Query: 5   YFKQGKVEQFRQILE-EGS--SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 61
           Y+++G    F +ILE  GS  S E  EY+ D    ++  L+ L  YY      E  + +K
Sbjct: 38  YYRRGNEADFVRILEMSGSEASLEYPEYHQD----QMRALDTLAAYYVIQSHKERNKDKK 93

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           +E    AT  Y  A +I M++    +G+    L +G+++QA   F  VL    +N+PA L
Sbjct: 94  KEWQTKATLLYTTADKIIMYDTYHLLGRAYFCLLEGKIDQAEQQFNFVLNQVGENIPATL 153

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G+AC+ F R  Y  +L  YK  L+  P CP  +RLGIG C  KLG+L KAR AF+R L L
Sbjct: 154 GKACIFFQRKEYRKALNCYKSVLRKMPDCPADVRLGIGYCLAKLGRLDKARLAFRRVLDL 213

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           D ENV ALVALA++D+   E   IR+G+E   RA++I     + LN+LANHFF+  +   
Sbjct: 214 DKENVSALVALAILDMNTLEQEAIRRGVESFGRAYQIEQENPVVLNHLANHFFYKKELDR 273

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
           VE L   A  +T++   ++ S Y LARS+H +G++EKA  +Y  S +       F+ PY+
Sbjct: 274 VEHLAWHAFQITDNEAMRAESCYQLARSFHQRGNFEKAFQHYYQSTQFATA--NFVLPYF 331

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIE------KAQE 352
           GLGQ+ +   D+ +A+  FEKVL+  P N +TLK LG +Y       Q E      KA+E
Sbjct: 332 GLGQMYIYREDYDNAIQCFEKVLKACPTNYDTLKILGSLYAHSEPANQKERSERRKKARE 391

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGV 411
           + +K  ++ P D +A IDL +L  + D   +LDA+  A T L +  E +VP E+ NN+G 
Sbjct: 392 IFKKVVEMCPDDVEALIDLAQLTENCDPQGSLDAYTKASTFLSQMIEVDVPPEITNNVGS 451

Query: 412 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
           ++F  G++E A   F++AL +      L     T   D +A  LQ               
Sbjct: 452 LYFTIGQYEKARVYFEEALKE------LGEVVSTGQTDLAA--LQ--------------- 488

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
                    TV +NLAR LE +     A  LY+ IL +  +Y+D Y+RL  +A+ +  + 
Sbjct: 489 --------TTVTYNLARSLEMLCMFDEAERLYKGILQEKPNYIDCYMRLGCLARDKGQIY 540

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLG 590
            S     E + VN  + +A S++G+L +   +W  A++ F       +   D Y+ ++LG
Sbjct: 541 ESSVWFKEGMSVNQSHADAWSLIGNLHMSKFEWAPAQKKFEYILKLPEYHDDPYSFVALG 600

Query: 591 NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 650
           N  +   L +  R  + +  + E+A  +Y++ +  H  N++AANG G +LA+KG    ++
Sbjct: 601 NI-WLETLSSIHRKKEKDKDYRERALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEAR 659

Query: 651 DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 710
           D+F QV+EA +        DVWIN+AHVY  Q  +  A++MY NC++KF  + D  +LLY
Sbjct: 660 DIFAQVREATA-----DFSDVWINIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVSLLLY 714

Query: 711 LARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRST 770
           LAR HY+A ++ +C+  L +AI  AP N  L+F+    +QK +   L+  + + + V   
Sbjct: 715 LARAHYKAGKFSECRHILEKAICEAPDNMMLKFNHAFVLQKLATQMLRDDKSSLEMVTGA 774

Query: 771 VAELENAVRVFSHLSAASNLHLHG---FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQ 827
           V +L  A  +F ++S   +  +            +    C  LL  A+ + + A+ ++++
Sbjct: 775 VDDLRTAATIFEYISRNKDDTMSQARIVSRTASASEARACYDLLTQAQTYLQRAKAQDEE 834

Query: 828 NRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQ-KRLRQQEEHFQRVKEQWRSST 886
            +++++   +   A   +R+ E++ K   EK + E E  K++RQ  E+ ++ KE  R  T
Sbjct: 835 EQRQRQRQEEERQA--LKRQQEQEAKEREEKARRELEVLKQMRQ--EYVEKTKEILRLPT 890

Query: 887 PASKRRERSENDDDEVGHSEKRRRKGGKRRKKDK 920
                              E++R +G  RR+KD+
Sbjct: 891 IV-----------------EEKRVRGSGRRRKDR 907


>gi|157129462|ref|XP_001655398.1| tpr repeat nuclear phosphoprotein [Aedes aegypti]
 gi|108872219|gb|EAT36444.1| AAEL011480-PA [Aedes aegypti]
          Length = 1120

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 306/961 (31%), Positives = 496/961 (51%), Gaps = 96/961 (9%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K + F +ILE  S  + +  Y D   +++   + L  YY      E  + +K E 
Sbjct: 50  YYKQNKTDDFIKILE-ASRIDANISYRDFEKDQMRAYDMLAAYYVQEANREKSKDKKREL 108

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ +  +G+    L +G+ +EQA + F  VL     N+P+LLG+
Sbjct: 109 FMKATHLYTTADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPSNIPSLLGK 168

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KA+ AFQRAL LDP
Sbjct: 169 ACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFLKLNNPEKAKLAFQRALDLDP 228

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V ALV LA++ L  +E    R G++ + +A+ I     M LN+LANHFFF   +  V+
Sbjct: 229 QCVGALVGLAILKLNLHEPESNRLGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQ 288

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++GL
Sbjct: 289 HLALHAFHNTENEAMRAESCYQLARAFHVQRDYDQAFQYYYQSTQ--FAPANFVLPHFGL 346

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 347 GQMYIYRGDSENAAQCFEKVLKAQPGNYETMKILGSLYASSSSQSKRDIAKNHLKKVTEQ 406

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D   +L A+ TA  +L  K   ++P E+LNN+  +H+  G  
Sbjct: 407 FPDDVEAWIELAQILEQNDLQGSLQAYATATNILTDKVKADIPPEILNNVAALHYRLGNL 466

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
             A             +T L+   +   I+A        D Q +                
Sbjct: 467 NEA-------------MTKLEMAIERAKIEAQ------HDSQYYDSIS------------ 495

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 496 VTMTYNLARLNEAMASFDKADKLYKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 555

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           ALK+N + P+  S+LG+L L    W   ++ F     +     D+Y+ ++LGN+ +  +L
Sbjct: 556 ALKINMENPDTRSLLGNLHLAKMQWTLGQKNFETILKNPATSSDAYSLIALGNF-WLQSL 614

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               +  + E  H EKA  +Y +V+     N++AANG G VLA KG    ++D+F QV+E
Sbjct: 615 HQPSKDKEKEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVRE 674

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AH+Y  Q  +  A++MY+NCL+KFY + +  ++ YLAR ++ A
Sbjct: 675 ATA-----DFCDVWLNIAHIYVEQKQYISAIQMYENCLKKFYKHNNVDVMQYLARAYFRA 729

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            + ++ K +LL+A  +AP +  L F+  + +Q+ +   L+  +     V   V EL  A 
Sbjct: 730 GKLKEAKMTLLKARRVAPQDTVLLFNIALVLQRLAMMVLKDEKSVLSVVLQAVHELGLAH 789

Query: 779 RVFSHLSAASNLHLHGFDEKKIN-----THVEYCKHLLDAAKIH---------------- 817
           + F++LS      +HG D+ + N     +    C+ LL  A+ H                
Sbjct: 790 KYFNYLS------IHG-DKTRYNITLAASEASQCQDLLQQAQYHVSRARKIDEEERSLRQ 842

Query: 818 REAAEREEQQNRQRQEAARQAALAEEARRKAEEQKK--------------YLLEKRKLED 863
           ++  EREE + RQR+E  R     EE RRKA E                 + +E      
Sbjct: 843 KQEQEREEFKRRQREERVRM----EEMRRKAHEDMMARRQEYKEKTKNALFFVESGPDPT 898

Query: 864 EQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRK-GGKRRKKDKSS 922
           ++K  R ++++   + +   S  P S   +R   +       EK++RK G  R+KK+K+ 
Sbjct: 899 KKKAGRGRKDY---ISDSDASGPPGSGGEDRPPKERKRKEPGEKKKRKPGAGRKKKEKAP 955

Query: 923 R 923
           +
Sbjct: 956 K 956


>gi|170062990|ref|XP_001866910.1| TPR repeat-containing protein [Culex quinquefasciatus]
 gi|167880758|gb|EDS44141.1| TPR repeat-containing protein [Culex quinquefasciatus]
          Length = 1128

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 303/958 (31%), Positives = 499/958 (52%), Gaps = 94/958 (9%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K E F +IL+ GS  + +  Y D   +++   + L  YY      E  + +K E 
Sbjct: 50  YYKQNKTEDFIKILD-GSRVDANISYRDFEKDQMRAYDMLAAYYVQEANREKSKDKKREL 108

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ +  +G+    L +G+ +EQA + F  VL     N+P+LLG+
Sbjct: 109 FMKATHLYTTADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPSNIPSLLGK 168

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  K+    KA+ AFQRAL LDP
Sbjct: 169 ACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFLKMNNQEKAKLAFQRALDLDP 228

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
             V ALV LA++ L  +E    R G++ + +A+ I     M LN+LANHFFF   +  V+
Sbjct: 229 ACVGALVGLAILKLNLHEPESNRLGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQ 288

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++GL
Sbjct: 289 HLALHAFHNTENEAMRAESCYQLARAFHVQRDYDQAFQYYYQSTQ--FAPVNFVLPHFGL 346

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 347 GQMYIYRGDSENAAQCFEKVLKAQPGNYETMKILGSLYASSSSQSKRDIAKNHLKKVTEQ 406

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D   +L A+ TA ++LK K   ++P E+LNN+  +H+  G  
Sbjct: 407 FPDDVEAWIELAQILEQNDLQGSLQAYATATSILKDKVKADIPPEILNNVAALHYRLGNM 466

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           E A +              LD+      ++A        D Q +                
Sbjct: 467 EKAMEK-------------LDTAIDRAKVEAQ------HDAQYYDSIS------------ 495

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +N ARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 496 VTMTYNQARLNEAMASFDRADKLYKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 555

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           ALK+N + P+  S+LG+L L    W   ++ F     +     D+Y+ ++LGN+ +  +L
Sbjct: 556 ALKINMENPDTRSLLGNLHLAKMQWTLGQKNFETILKNPATSSDAYSLIALGNF-WLQSL 614

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               +  + E  H EKA  +Y +V+     N++AANG G VLA KG    ++D+F QV+E
Sbjct: 615 HQPSKDKEKEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVRE 674

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AH+Y  Q  +  A++MY+NCL+KFY + +  ++ YLAR ++ A
Sbjct: 675 ATA-----DFCDVWLNIAHIYVEQKQYISAIQMYENCLKKFYKHNNVDVMQYLARAYFRA 729

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            + ++ K +LL+A  +AP +  L F+  + +Q+ +   L+  +     V   V EL  A 
Sbjct: 730 GKLKEAKMTLLKARRVAPQDTVLLFNIALVLQRLAMMVLRDEKSVLTVVLQAVHELGLAH 789

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F++LS      +HG D+ + N  +       C+ LL  A+ H   A +   EE+  RQ
Sbjct: 790 KYFNYLS------VHG-DKTRYNIALAAAEASQCQDLLQQAQYHVSRARKIDEEERSLRQ 842

Query: 831 RQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASK 890
           +QE  R     EE +R+  E++  + E R+   E+  L ++ E+ ++ K     +  A +
Sbjct: 843 KQEQDR-----EEFKRRQREERSRMEEMRRKAHEE-MLAKRIEYKEKTKNALFFAEQAPE 896

Query: 891 RRERSENDDDEVGHSE---------------------------KRRRKGGKRRKKDKS 921
           +++      D +  S+                           K+R+ GG R+KK+K+
Sbjct: 897 KKKGGRGRKDYISDSDASGPPGGSGGEEGGAPRERKRKEPGEKKKRKPGGGRKKKEKA 954


>gi|256084411|ref|XP_002578423.1| tpr repeat nuclear phosphoprotein [Schistosoma mansoni]
 gi|353230098|emb|CCD76269.1| putative tpr repeat nuclear phosphoprotein [Schistosoma mansoni]
          Length = 1091

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 281/846 (33%), Positives = 461/846 (54%), Gaps = 48/846 (5%)

Query: 5   YFKQGKVEQFRQILEEG--SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKE 62
           Y+K+   + F ++LEE   ++ ++  Y+     + + +L+ L  YY      E  + +K 
Sbjct: 63  YYKKKLYDDFEKVLEEAYLNAADLQPYHDS---DLVRLLDMLANYYGRKAYKEKSKDKKN 119

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALL 121
           +    AT+ +  A RIDM++    +G+    + +GE   QA S    VL     +VPA L
Sbjct: 120 QLIAQATRLFTSADRIDMYDQKHLLGRAFFFIYEGENWSQADSQLNFVLNQGAPSVPAYL 179

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G+AC+ FN+  Y ++L FY++AL++ P+CP  +RLG+G C ++LG + KAR AF+RAL L
Sbjct: 180 GKACIAFNKKEYRNALGFYRKALRLQPNCPATVRLGMGHCFFRLGNMEKARLAFKRALDL 239

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           DPE V ALV LAV+DL       I++G++K+ RA+ +     M LN+LA+HFF+  ++  
Sbjct: 240 DPECVGALVGLAVLDLNEKTQESIKQGVQKLSRAYNLDSTNPMVLNHLADHFFYKKEYAK 299

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
           V +L   A   T     ++ S Y +AR++H + +Y+ A  YY  + +  +    FI P+Y
Sbjct: 300 VHRLALHAFYNTETESIRAESCYQMARAFHIQENYDNAFQYYYLATQLASST--FILPFY 357

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAA 358
           GLGQ+ L   D   A  +FE+VL+  P+N ETLK LG +Y Q  + +K   +++L ++  
Sbjct: 358 GLGQMYLHRNDLEHAAMSFERVLKDNPNNYETLKILGSLYAQSNKPDKRTQSKQLFKQVT 417

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
           +  P D +A+I+  +LL  +D   ALDA+  A T+L+    E+  E+LNNI  +HF KGE
Sbjct: 418 ESQPEDVEAWIEYAQLL-DNDINGALDAYSKALTILENIQLEIAPEILNNIAALHFTKGE 476

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
           ++ + + F  +  D I   L + + +       +S L   D   +H              
Sbjct: 477 YDKSSEFFTRSY-DRI---LEEQRNEENECGGDSSGLTNDDY--YHGLS----------- 519

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            +TV +N ARL E    +  A  +Y+ IL ++  Y++ YLRL  IA+ R  ++ +     
Sbjct: 520 -ITVRYNQARLHEAQGRSDLAEEIYKSILLRHPSYIECYLRLGCIARDRGQIRDASIWFK 578

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAA 597
           EAL V+   P+A +++G L L  ++  +A++ F R         D++A + LGN  +   
Sbjct: 579 EALDVDQDNPDAWTLIGLLHLGKNEVEQAQKKFDRIIRQPAYRADAFARICLGNI-WLTT 637

Query: 598 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
           L +  +       H ++A   Y  V+     N++AA+G G VLA KG  + ++D+F QV+
Sbjct: 638 LHHPIKDKDKRKRHQDRALSFYKAVLCADPRNIWAAHGIGCVLAHKGFVNEARDVFAQVR 697

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           EA +       PDVWIN+AH+Y  Q  +  A++MY+NC++KF    + ++L YLAR H++
Sbjct: 698 EATA-----DFPDVWINIAHIYVEQKQYTAAIQMYENCIKKFSRQNNTELLQYLARAHFK 752

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 777
           A Q ++CK  LL+A H+ P +  L F+     ++ + + LQ    +   V   +A+L  A
Sbjct: 753 AGQLKECKTMLLKARHVKPWDPVLTFNLAFVQKRLAVTVLQDETSSFSSVCEAIADLNMA 812

Query: 778 VRVFSHLSAASNL--HLHGFDEKKINTHVEYCKHLLDAAKIHREAAE-REEQQN--RQRQ 832
              F+HLS  + +       DE +I      C+ LL  AK H + A+ REEQ+   R+RQ
Sbjct: 813 RCTFNHLSKLNEVLNQAMAADEARI------CQDLLSQAKYHLDRAKSREEQERVVRKRQ 866

Query: 833 EAARQA 838
           E  R+A
Sbjct: 867 EEEREA 872


>gi|193659732|ref|XP_001943461.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Acyrthosiphon pisum]
          Length = 1185

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 293/960 (30%), Positives = 495/960 (51%), Gaps = 89/960 (9%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+K+G      ++LE   S    EY  D   +++  L+ L  YY      E  + ++ E
Sbjct: 49  EYYKRGNSAALVRLLESSRSNASLEY-KDSDKDQMRALDMLAAYYVQTANREKSKDKRRE 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  ATQ Y  A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+PA LG
Sbjct: 108 LFTKATQLYTTADKIIMYDTNHLLGRAFFCLLEGDKIEQADAQFNFVLNQSSNNIPAQLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FNR  Y  +L +YK+AL+ +P CP  +RLG+  C  KLG + KAR AF+RALQLD
Sbjct: 168 KACIAFNRKDYRGALAYYKKALRSNPQCPADVRLGMAHCFLKLGNIEKARLAFERALQLD 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
            + V ALV LA+M L       I+ G+  + +A+ I     M LN+L+NHFFF   +   
Sbjct: 228 SKCVGALVGLAIMKLNGENPGDIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFFKKDYTKS 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           E L   AL  T +   ++ S Y +AR++H + +Y++A  YY  + +    P  F+ P+YG
Sbjct: 288 ELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAFQYYYQATQFA--PVTFVLPHYG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A   FEKVL+ +P N E +K LG +Y      +K   A+  L+K  +
Sbjct: 346 LGQMYIYGGDMENAAQCFEKVLKAHPGNYEAMKILGSLYADSKNQQKRDIAKSHLKKVTE 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA-GEEVPIEVLNNIGVIHFEKGE 418
             P D +A+++L ++L  SD  A+L A+  A  L++ +    +P E+LNN+  +++    
Sbjct: 406 HFPDDVEAWVELAQILEQSDLQASLSAYDKAMVLMRNSVNNYIPPEILNNVAALNYRLKN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + +    +++L          S +K  V                   E D  H    +N
Sbjct: 466 MDESRSKLEESL----------SLSKKMV-------------------EADPQH----YN 492

Query: 479 K--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
              VT  +NLAR+ E       A  LY+ IL ++ +Y+D YLRL  +A+ RN +  + + 
Sbjct: 493 SIAVTTTYNLARIFEAQCQFQKAETLYKDILKEHPNYIDCYLRLGCMARDRNQIYEASDW 552

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 595
             EAL+++ ++P+A S+LG+L L   +W   ++ F R   + +   DSY+ ++LGN  + 
Sbjct: 553 FKEALRIDNEHPDAWSLLGNLHLAKMEWGPGQKKFERVLKNPSTLNDSYSLIALGNV-WL 611

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
             L    R    E  H + A + +T+V+     N++AANG G V+A K   + ++D+F Q
Sbjct: 612 QTLHQPTRNKDQEKRHQDLALQFFTKVLKNDPRNIWAANGIGCVMAHKHCINEARDIFAQ 671

Query: 656 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTH 715
           V+EA +        DVW+N+AH+Y  Q  +  A++MY+NC++KF+ +   ++L YL R +
Sbjct: 672 VREATA-----DFCDVWLNIAHIYIEQKQYISAIQMYENCMKKFFKHDSVEVLQYLGRAY 726

Query: 716 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 775
           + A + ++ K   L+A  +AP +  + ++    +QK +A  L+  +    +V   V EL 
Sbjct: 727 FRAGKLKEAKTVFLKARRVAPQDTVIIYNIAFVLQKLAAQILKDEKSNLKDVLKAVHELG 786

Query: 776 NAVRVFSHLSAASNLHLHG----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQN 828
            + + F +LS      +HG    +D    +   + C+ LL  A+ H   A +   +E++ 
Sbjct: 787 LSHKYFQYLS------VHGDRMRYDVSLADIEAKQCQDLLSQAQYHVARARKMDNDEREM 840

Query: 829 RQRQEAARQAALAEE------ARRKAEEQKKYLLEKRK---------------LEDEQKR 867
           R++QE  R++   ++      A +K EEQ+K +L KR+               LE  + +
Sbjct: 841 RRKQEEERESLRVKQIEEQTKALQKQEEQRKEMLLKRQEYREKTKSALVFDPVLEKPKGK 900

Query: 868 LRQQEEHFQR-----VKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSS 922
            +++E +          E   + +P   +  +S       G  EK++R G KRR+   +S
Sbjct: 901 GKRRENYGSDSGGSIASEPGGNRSPRPSKSNKSRKSGGTGGDKEKKKRGGSKRRRDSVAS 960


>gi|357606129|gb|EHJ64926.1| putative tpr repeat nuclear phosphoprotein [Danaus plexippus]
          Length = 1194

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 289/843 (34%), Positives = 455/843 (53%), Gaps = 60/843 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K++ F +ILE  S  + +  Y D   +++  L+ L  YY      E  + +K+E 
Sbjct: 41  YYKQNKIDDFLKILE-ASRVDANIDYRDFERDQMRALDMLAAYYVQEANKEKSKDKKKEL 99

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F  AT  Y  A +I M++ +  +G+    L +G+ + QA + F  VL    +NVP+LLG+
Sbjct: 100 FTEATLLYTMADKIIMYDQNHLLGRAYFCLLEGDKMAQADTQFNFVLNQSPNNVPSLLGK 159

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  +L FYK+AL+ +P+ P A+RLG+G C  KL    KAR AF+RALQLDP
Sbjct: 160 ACIAFNRKDYRGALAFYKKALRTNPNSPAALRLGMGHCFMKLNNQEKARMAFERALQLDP 219

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V ALV L+++ L   E+   +  +  + +A+ I P   M LN+LANHFFF   +  V+
Sbjct: 220 QCVGALVGLSILKLNLQESESNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYSKVQ 279

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S ++LAR+YH++GD  KA  YY  + +    P  F+ P+YGL
Sbjct: 280 HLALHAYHNTENDAMRAESCHHLARAYHAQGDCVKAFQYYYQATQ--FAPPNFVLPHYGL 337

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ-LGQIEK--AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y     Q+++  A++ L+K  + 
Sbjct: 338 GQMYIYRGDTENAAQCFEKVLKAQPGNYETMKILGSLYANSPSQLQRDIARQHLKKVTEQ 397

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D   +L+A+ TA  +LK K   E+P E+LNN+  +H+  G  
Sbjct: 398 FPDDVEAWIELAQILEQNDLQGSLNAYTTAMKILKEKVNAEIPAEILNNVAALHYRLGNL 457

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
             A +  ++AL           K +   +DA     Q+ +  L                 
Sbjct: 458 NEAMKYLEEALE--------REKVEAETLDA-----QYYNSIL----------------- 487

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT ++NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  +  + +   E
Sbjct: 488 VTTMYNLARLNEALCVYNKAEKLYKDILKEHPNYIDCYLRLGCMARDKGQIYEASDWFKE 547

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAAL 598
           ALKVN ++P+  S+LG+L L   +W   ++ F R   ++T   D+Y+ ++LGN  +   L
Sbjct: 548 ALKVNIEHPDTWSLLGNLHLAQQEWGPGQKKFERILQNSTTSNDAYSLIALGNV-WLQTL 606

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R    E  H E+A  LY +V+     N++AANG G VLA KG  + ++D+F QV+E
Sbjct: 607 HQPGREKDREKRHQERALALYKQVLKNDPKNIWAANGIGCVLAHKGCINEARDIFAQVRE 666

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +       PDVW+N+AH+Y  Q  +  A++MY+NC+RKF  + D + L +L R    A
Sbjct: 667 ATA-----DFPDVWMNIAHIYVDQKQYINAIQMYENCIRKFRTHHDVEWLTWLGRAQTLA 721

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            + +  + SLLRA  +AP +  L ++  +A+++ +A  L+  R     V   V EL  + 
Sbjct: 722 GRARAARTSLLRARRVAPHDPALLYNTALALRRLAAHVLKDERSELRVVLRAVHELHVSH 781

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN---RQRQEAA 835
           R F  L AA+                  C  LL  A+ H   A R+ Q+    R +Q   
Sbjct: 782 RYFQRLGAAA------------AAEARTCADLLSQAQWHVARARRQHQEELTLRDKQREQ 829

Query: 836 RQA 838
           R+A
Sbjct: 830 REA 832


>gi|31242247|ref|XP_321554.1| AGAP001559-PA [Anopheles gambiae str. PEST]
 gi|19572379|emb|CAD27925.1| putative TPR-containing phosphoprotein [Anopheles gambiae]
 gi|21288614|gb|EAA00907.1| AGAP001559-PA [Anopheles gambiae str. PEST]
          Length = 1200

 Score =  451 bits (1160), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 293/904 (32%), Positives = 490/904 (54%), Gaps = 67/904 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K + F +ILE  S  + + +Y D   +++   + L  YY      E  + +K + 
Sbjct: 50  YYKQKKTDDFIKILE-ASRVDANIHYRDFEKDQMRAYDMLAAYYVQEANREKSKDKKRDL 108

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 109 FLKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 168

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KA+ AFQRAL L+P
Sbjct: 169 ACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFLKLSNPDKAKLAFQRALDLEP 228

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V ALV LA++ L  +E    R G++ + +A+ I     M LN+LANHFFF   +  V+
Sbjct: 229 QCVGALVGLAILKLNLHEPESNRMGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQ 288

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++GL
Sbjct: 289 HLALHAFHNTENEAMRAESCYQLARAFHVQRDYDQAFQYYYQSTQ--FAPVNFVLPHFGL 346

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 347 GQMYIYRGDSENAAQCFEKVLKAQPGNYETMKILGSLYATSSSQSKRDIAKNHLKKVTEQ 406

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLL-KKAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D   +L A+ TA ++L +K   ++P E+LNN+  +H+  G  
Sbjct: 407 FPDDVEAWIELAQILEQNDLQGSLQAYGTATSILTEKVNADIPPEILNNVAALHYRLGNL 466

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           + A             ++ L+   +   I+A        D Q +                
Sbjct: 467 DEA-------------MSKLEQAIERAKIEAQ------HDAQYYDSIS------------ 495

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           V++ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 496 VSMTYNLARLYEAMAVFDKADKLYKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 555

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           ALK+N + P+  S+LG+L L    W   ++ F     +     D+Y+ ++LGN+ +  +L
Sbjct: 556 ALKINMENPDTRSLLGNLHLAKMQWTLGQKNFETILKNPATSSDAYSLIALGNF-WLQSL 614

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  +Y +V+     N++AANG G VLA KG    ++D+F QV+E
Sbjct: 615 HQPNRDKEKEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVRE 674

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVWIN+AH+Y  Q  +  A++MY+NCL+KFY + + +++ YLAR ++ A
Sbjct: 675 ATA-----DFCDVWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNVEVMQYLARAYFRA 729

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            + ++ K +LL+A  +AP +  L F+  + +Q+ +   L+  +     V   V EL  A 
Sbjct: 730 GKLKEAKMTLLKARRVAPQDTVLLFNIALVLQRLATFVLRDEKSVLSVVLQAVHELGLAH 789

Query: 779 RVFSHLSAASNLHLHGFDEKKIN-----THVEYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F++LS      +HG D+ + N     T    C+ LL  A+ H   A +   EE+  RQ
Sbjct: 790 KYFTYLS------VHG-DKTRYNIALAETEANQCQDLLQQAQYHVSRARKIDEEERSLRQ 842

Query: 831 RQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASK 890
           +QE  R+    E  RR+AE++++    +RK  +E   L +++E+ ++ K     + PA +
Sbjct: 843 KQELERE----EFKRRQAEDRRRMEEMRRKAHEEM--LLKRQEYKEKTKNALFFAEPAPE 896

Query: 891 RRER 894
            +++
Sbjct: 897 AKKK 900


>gi|195126359|ref|XP_002007638.1| GI13051 [Drosophila mojavensis]
 gi|193919247|gb|EDW18114.1| GI13051 [Drosophila mojavensis]
          Length = 1205

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 294/930 (31%), Positives = 489/930 (52%), Gaps = 85/930 (9%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K + F  +LE        +Y  D + +++   + L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTDDFIMLLEAARDKGTTDY-RDYKTDQMRAYDMLAAHYVQEAYREKSKDKKREL 108

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 109 FMKATNLYTNADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 168

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 169 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERALQLDQ 228

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 229 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 288

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 289 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQI--APANFVLPHYGL 346

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 347 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQ 406

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  
Sbjct: 407 FPEDIEAWIELAQILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNL 466

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           + A  + + AL                   AS+ M   KD++ +   +            
Sbjct: 467 KLAKDTLESALK-----------------HASSEME--KDVKYYESIQ------------ 495

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 496 VTMKYNLARLNEAMSCFDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 555

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     +     D+Y+ ++LGN++    L
Sbjct: 556 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPATASDAYSLIALGNFS-LQTL 614

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+E
Sbjct: 615 HQPSRDKEKERKHQEKALAIFKQVLRTDPRNIWATNGIGAVLAHKGCVIEARDIFAQVRE 674

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AH+Y  Q  +  A++MY+NC++KF+ + + +++ YLAR +  A
Sbjct: 675 ATA-----DFCDVWLNIAHIYVEQKQYISAIQMYENCMKKFFKHNNVEVMQYLARAYLRA 729

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  + K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 730 NKLVEAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAH 789

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAEREEQQNRQRQE 833
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R ++++R    
Sbjct: 790 KYFQYLS------VHG-DKTRFNIEVAGVEANTCQDLLSQAQYHVGRARRIDEEDR---- 838

Query: 834 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRE 893
                 L      + E  K+ +LE+RK  +E+ ++ +++                +KR+E
Sbjct: 839 -----TLRRRQEEEREAFKQKMLEQRKRREEEAKMSREQ--------------LLAKRQE 879

Query: 894 RSENDDDEV----GHSEKRRRKGGKRRKKD 919
             E   + +      +EK R+KG  R +KD
Sbjct: 880 YVEKTKNLLIIADAPTEKERKKGSGRPRKD 909


>gi|195376509|ref|XP_002047039.1| GJ12147 [Drosophila virilis]
 gi|194154197|gb|EDW69381.1| GJ12147 [Drosophila virilis]
          Length = 1187

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 295/926 (31%), Positives = 487/926 (52%), Gaps = 77/926 (8%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K + F  +LE        +Y  D + +++   + L  +Y      E  + +K E 
Sbjct: 50  YYKQKKTDDFIMLLEAAREKGTLDY-RDFKTDQMRAFDMLAAHYVQEAYREKSKDKKREL 108

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 109 FMKATNLYTNADKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 168

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FNR  Y  ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD 
Sbjct: 169 ACIAFNRKDYRGAMAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERALQLDQ 228

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V AL+ LAV+ L   E    + G++ + +A+ I     M LN+LANHFFF   +  V 
Sbjct: 229 QCVGALIGLAVLKLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVH 288

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGL
Sbjct: 289 HLALHAFHNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQ--IAPANFVLPHYGL 346

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD  +A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 347 GQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQ 406

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  
Sbjct: 407 FPEDIEAWIELAQILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNL 466

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           + A  + + AL                   AS+ M   KD++ +   +            
Sbjct: 467 KLAKDTLESALK-----------------HASSEM--DKDVKYYESIQ------------ 495

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 496 VTMKYNLARLNEAMSSFDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 555

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           AL +N   P+A S+LG+L L    +   ++ F     +     D+Y+ ++LGN++    L
Sbjct: 556 ALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPATASDAYSLIALGNFS-LQTL 614

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+E
Sbjct: 615 HQPSRDKEKERKHQEKALAIFKQVLRTDPRNIWATNGIGAVLAHKGCVIEARDIFAQVRE 674

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A
Sbjct: 675 ATA-----DFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRA 729

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            +  + K  LL+A  +AP +  L F+  V + + + + L+  + T + V   V ELE A 
Sbjct: 730 NKLVEAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAH 789

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAEREEQQNRQRQE 833
           + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R ++++R  + 
Sbjct: 790 KYFQYLS------VHG-DKTRFNIEVAGVEANTCQDLLSQAQYHVGRARRIDEEDRTLRR 842

Query: 834 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRE 893
              +   A   + K +EQ+K   E+ K   +Q  L +++E+ ++ K     +        
Sbjct: 843 RQEEEREA--FKLKMQEQRKRREEEAKTSRDQ-LLAKRQEYVEKTKNLLIIADAP----- 894

Query: 894 RSENDDDEVGHSEKRRRKGGKRRKKD 919
                      +EK R+KG  R +KD
Sbjct: 895 -----------TEKERKKGSGRPRKD 909


>gi|449678121|ref|XP_002164299.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Hydra
           magnipapillata]
          Length = 1036

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 284/856 (33%), Positives = 463/856 (54%), Gaps = 94/856 (10%)

Query: 22  SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMH 81
           ++P ++  Y + + +++ +L++L  YY   G+ E +  +K E F  ATQ Y  A +I   
Sbjct: 76  ATPNLE--YKEYQQDQMVVLDSLAAYYVQAGRKEKEAEKKRELFTKATQLYTTADKI--- 130

Query: 82  EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 141
                                     I+L+    N+PALLG+AC+ F +  Y  SL +YK
Sbjct: 131 --------------------------IMLDQSASNIPALLGKACISFQKKDYKASLAYYK 164

Query: 142 RALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 201
           +AL+ +P+CP  +RLG+G C Y+L ++ KAR AF+RAL L+   + ALV LA+++L + +
Sbjct: 165 KALRTNPNCPAEVRLGMGHCFYRLNRMEKARLAFERALALNSRCIGALVGLAILELNSKK 224

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
              I+ G++ + + + I    AM LN+LA HFFF   +  V+ L   A   T     ++ 
Sbjct: 225 PDSIKVGVQLLSKGYAIDSQNAMVLNHLAEHFFFKKDYAKVQHLALHAFHGTEVEAMQAE 284

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           S Y+LARS+H +GDY++A  YY  +  + + P+ ++ P++GLGQ+ +  GD  +A   FE
Sbjct: 285 SCYHLARSFHVQGDYDQAFQYYYQAT-QFSAPN-YVLPWFGLGQMYIARGDTVNASQCFE 342

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISS 378
           KVL+  P+N ET+K LG +Y    + EK   A++ L+K  +  P D +A+I+L  +L  +
Sbjct: 343 KVLKHQPNNYETMKILGSLYSSSSEPEKRELAKKHLKKVTEQFPDDVEAWIELAGILEQA 402

Query: 379 DTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 437
           D  AAL A+  A  +LK+  E +VP E+LNN+G +HF  G    A + ++ A+      +
Sbjct: 403 DVQAALSAYGAASRILKEKVEADVPPEILNNVGALHFRLGNLNEAKKFYEVAMEHCKEES 462

Query: 438 LLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 497
           +   + +TY    S SM                             +N+ARL+E   +  
Sbjct: 463 M---QGETYYRAISVSM----------------------------QYNMARLMEAQFEFD 491

Query: 498 AASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
            A  +Y+ IL ++  YVD YLRL  +A+ +  +  + +    AL+++  +P+A +++G+L
Sbjct: 492 KAEKVYKDILREHPSYVDCYLRLGCMARDKGQIYEASDWFKMALQIDQDHPDAWTLIGNL 551

Query: 558 ELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAK 616
            L   +W   ++ F R         D+YA ++LGN  +   L    R    E  H E+A 
Sbjct: 552 HLAKQEWGPGQKKFERILKQPATSSDTYALVALGNV-WLQTLHTPLRDKSKEKRHQERAI 610

Query: 617 ELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 676
            ++ +V+     N+YAANG G VLA KG F  ++D+F+QV+EA +     ++PD+W+NLA
Sbjct: 611 AMFKQVLRIDQRNIYAANGIGCVLAHKGYFREARDVFSQVREATA-----EVPDIWLNLA 665

Query: 677 HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAP 736
           HVY  Q  F  A++MY+NCL+KF+ +   +++ YLAR +Y+A + +DCK+ LL+  H+AP
Sbjct: 666 HVYVEQKQFVSAIQMYENCLKKFFKSYSVEVMFYLARAYYKAGRLEDCKELLLKTRHVAP 725

Query: 737 SNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG-- 794
            +  L F+  +  Q+ + S L+  +     V S VA+LE A R F +LS       HG  
Sbjct: 726 HDTLLMFNLSLVQQRLATSVLRNEKSNLKTVLSAVADLELAQRNFDYLSR------HGDR 779

Query: 795 --FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQ----EAARQAALAEEAR 845
             FD  +       C  LL  A+ H + A R   E Q+ R++Q    E  RQ  L  E++
Sbjct: 780 MKFDLAQARQEAGRCSDLLSQAQYHVQRARRIDEEAQEQRKKQDEERELLRQQQLEAESK 839

Query: 846 --RKAEEQKKYLLEKR 859
             ++ E +K+ LLEKR
Sbjct: 840 LNQQKEAEKQQLLEKR 855


>gi|358334314|dbj|GAA52741.1| RNA polymerase-associated protein CTR9 homolog [Clonorchis
           sinensis]
          Length = 1257

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 283/870 (32%), Positives = 464/870 (53%), Gaps = 60/870 (6%)

Query: 5   YFKQGKVEQFRQILEEG--SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKE 62
           Y+K+   + F ++LEE   ++ ++  Y      + + +L+ L  YY      E  + +K 
Sbjct: 83  YYKKRLYDDFEKVLEEAYRNAADLQPYQEG---DLVRLLDMLANYYGRKAYKEKTKEKKN 139

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALL 121
           +    AT+ +  A RIDM++    +G+    + +GE   QA S    VL     +VPA L
Sbjct: 140 QLIAHATRLFTSADRIDMYDQKHLLGRAFFFIYEGENWSQADSQLNFVLNQGAPSVPAYL 199

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G+AC+ FN+  Y ++L FY++AL++ P+CP ++RLG+G C +KLG + KAR AFQRAL L
Sbjct: 200 GKACIAFNKKEYRNALGFYRKALRLQPNCPASVRLGMGHCFFKLGNMEKARLAFQRALDL 259

Query: 182 DPENVEALVALAVMDLQANEAA-----------GIRKGMEKMQRAFEIYPYCAMALNYLA 230
           DP+ V ALV LA++DL     A            I++G++++ RA+ + P   M LN+LA
Sbjct: 260 DPDCVGALVGLAILDLNEKTQAIILFRSCTHQESIKQGVQRLSRAYNLDPTNPMVLNHLA 319

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
           +HFF+  ++  V++L   A   T     ++ S Y +AR++H + +Y+ A  YY  + +  
Sbjct: 320 DHFFYKKEYDKVQRLALHAFYNTETEAMRAESCYQMARAFHMQENYDNAFQYYYLATQLA 379

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK- 349
           +    FI P+YGLGQ+ L   D   A  +FE+VL+ +P N ETLK LG +Y Q  + +K 
Sbjct: 380 SS--NFILPFYGLGQMYLHRNDLEHAAVSFERVLKDHPTNYETLKILGSLYSQSNKPDKR 437

Query: 350 --AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN 407
             A++L ++  +  P D +A+I+  +LL  +DT  ALDA+  A T+L+    +V  E+LN
Sbjct: 438 AQAKQLFKQVTESQPEDVEAWIEYAQLL-ENDTNGALDAYLKALTILENIQLDVAPEILN 496

Query: 408 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 467
           NI  ++  K +   A   F  AL     +       +    D         D + +H   
Sbjct: 497 NIACLYHMKNDHTQAMNFFTRALDR---IQEEQQSEENERADGGVG----HDDEYYHGL- 548

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
                       +TV +N ARL E       A  +Y+ IL ++  Y+D YLRL  IA+ R
Sbjct: 549 -----------NITVRYNRARLHEVCGRPDLAEEIYKSILLQHPSYIDCYLRLGCIARDR 597

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYAT 586
             +  +     +AL ++  +P+  S++G L L  ++  +A++ F R     T   D++A 
Sbjct: 598 GMIWDASIWFKDALDIDPDHPDVWSLIGLLHLSKNEAEQAQKKFDRIIRQPTYRADAFAR 657

Query: 587 LSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 646
           +SLGN  +   L +  R       H ++A   Y  V+     N++AA+G G VLA KG  
Sbjct: 658 ISLGNI-WLTTLHHPIRDKDKRKRHQDRALSFYKAVLCADPRNIWAAHGIGCVLAHKGFV 716

Query: 647 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 706
           + ++D+F QV+EA +       PDVWIN+AH+Y  Q  +  A++MY+NCL+KF    + +
Sbjct: 717 NEARDVFAQVREATA-----DFPDVWINIAHIYVEQKQYTAAIQMYENCLKKFSMQNNTE 771

Query: 707 ILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADE 766
           +L YLAR +++A Q ++CK  LL+A+H+ P +  L F+  +  ++ + + LQ    +   
Sbjct: 772 LLQYLARAYFKAGQLKECKTMLLKAMHVKPWDQLLTFNLALVRKRLAVTVLQDETSSFLS 831

Query: 767 VRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAE-REE 825
           V   +A+L  A   F HLS ++ +        +  T    C+ LL  AK H + A+ REE
Sbjct: 832 VCDAIADLNMARCTFDHLSKSNEVLNQALAADEART----CQDLLSQAKYHLDRAKSREE 887

Query: 826 QQN--RQRQEAARQAALAEEARRKAEEQKK 853
           Q+   R+RQE  R+A    + +R+ E QK+
Sbjct: 888 QERVVRKRQEDEREA----QRKRQIELQKQ 913


>gi|410973400|ref|XP_003993141.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Felis
           catus]
          Length = 1141

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 296/875 (33%), Positives = 460/875 (52%), Gaps = 97/875 (11%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG                  
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANG------------------ 652

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
                              I        Q  +  A++MY+NCLRKFY + + +++LYLAR
Sbjct: 653 -------------------IXXXXXXVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLAR 693

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V E
Sbjct: 694 ALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKE 753

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR---- 829
           LE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R    
Sbjct: 754 LELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRA 811

Query: 830 ---QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
              Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 812 KQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 846


>gi|328701579|ref|XP_001951487.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
           [Acyrthosiphon pisum]
          Length = 1177

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 274/872 (31%), Positives = 463/872 (53%), Gaps = 57/872 (6%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+K+G      ++LE   S    EY  D   +++  L+ L  YY      E  + ++ E
Sbjct: 49  EYYKRGNSAALVKLLESSRSNASLEY-KDSDKDQMRALDMLAAYYVQSANREKSKDKRRE 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  ATQ Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PA LG
Sbjct: 108 LFAKATQLYTTADKIIMYDTNHLLGRAFFCLLEGDKIDQADAQFNFVLNQSSNNIPAQLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FNR  +  +L +YK+ L+ +P CP  +RLG+  C  KLG   KAR AF+RA+QLD
Sbjct: 168 KACIAFNRKDFRGALAYYKKVLRSNPQCPADVRLGMAHCFLKLGNAEKARLAFERAIQLD 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
            + V ALV LA++ L       I+ G+  + +A+ I     M LN+L+NHFFF   +   
Sbjct: 228 SKCVGALVGLAILKLNGENPGDIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFFKKDYTKY 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           E L   AL  T +   ++ S Y +AR++H + +Y++A  YY  + +    P  F+ P+YG
Sbjct: 288 ELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAFQYYYQATQFA--PVTFVLPHYG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A   FEKVL+ +P N E +K LG +Y      +K   A+  L+K  +
Sbjct: 346 LGQMYIYGGDMENAAQCFEKVLKAHPGNYEAMKILGSLYANSKNQQKRDIAKSHLKKVTE 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L  SD   +L A+     L++ +    +P E+LNN+  ++F    
Sbjct: 406 HFPDDVEAWIELAQILEQSDLQGSLSAYGKVIVLMRNQVNNYIPPEILNNVAALNFRLQN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A    +++L                    S  M++  D Q ++              
Sbjct: 466 MDEARSKLEESLS------------------LSKKMVE-ADPQYYNSIA----------- 495

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            VT  FNLAR+ E       A   Y+ IL ++ +Y+D YLRL  +A+ RN +  + +   
Sbjct: 496 -VTTTFNLARIFEAQCQFQKAETFYKDILKEHPNYIDCYLRLGCMARDRNQIYEASDWFK 554

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAA 597
           EAL+++ ++P+A S+LG+L L   +W   ++ F R   + +   DSY+ ++LGN  +   
Sbjct: 555 EALRIDNEHPDAWSLLGNLHLAKMEWGPGQKKFERVLKNPSTLNDSYSLIALGNV-WLQT 613

Query: 598 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
           L    R  + E  H + A + +T+V+     N++AANG G V+A K   + ++D+F QV+
Sbjct: 614 LHQPTRNKEQEKRHQDLALQFFTKVLKNDPKNIWAANGIGCVMAHKQYINEARDIFAQVR 673

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           EA +        DVW+N+AH+Y  Q  +  A++MY+NC++KF+ + + +IL YL R +++
Sbjct: 674 EATA-----DFCDVWLNIAHIYIEQKQYISAIQMYENCIKKFFKHDNVEILQYLGRAYFK 728

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 777
           A + ++ KK  L+A  +AP +  + ++    +QK SA TL+  +    +V   V EL  +
Sbjct: 729 AGKLKEAKKVFLKARRVAPQDLVIIYNIAFVLQKLSAQTLKDGKSNLKDVLKAVHELGLS 788

Query: 778 VRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEA 834
            + F +L  A N     +D    +   + C+ LL  A+ H   A +   +E++ R++QE 
Sbjct: 789 HKYFQYL--AVNGDRMRYDVNLADFEAKQCQDLLSQAQYHVARARKMDHDEREMRRKQEE 846

Query: 835 ARQAALAEE------ARRKAEEQKKYLLEKRK 860
            R++   ++      A +K EEQ+K +L KR+
Sbjct: 847 ERESLRVKQIEEQTKALQKQEEQRKEMLLKRQ 878


>gi|170581356|ref|XP_001895649.1| TPR Domain containing protein [Brugia malayi]
 gi|158597331|gb|EDP35505.1| TPR Domain containing protein [Brugia malayi]
          Length = 1352

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 297/934 (31%), Positives = 479/934 (51%), Gaps = 105/934 (11%)

Query: 5    YFKQGKVEQFRQILE-EGS--SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 61
            Y+++G    F +ILE  GS  S E  EY+ D    ++  L+ L  YY      E  + +K
Sbjct: 272  YYRRGNEADFVRILEMSGSEASLEYPEYHQD----QMRALDTLAAYYVIQSHKERNKDKK 327

Query: 62   EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
            +E    AT  Y  A +I M++    +G+    L +G+++QA   F  VL    +N+PA L
Sbjct: 328  KEWQTKATLLYTTADKIIMYDTYHLLGRAYFCLLEGKIDQAEQQFNFVLNQVGENIPATL 387

Query: 122  GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
            G+AC+ F R  Y  +L  YK  L+  P CP  +RLGIG C  KLG+L KAR AF+R L L
Sbjct: 388  GKACIFFQRKEYRKALNCYKSVLRKMPDCPADVRLGIGYCLAKLGRLDKARLAFKRVLDL 447

Query: 182  DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
            D ENV ALVALA++D+   E   IR+G+E   RA++I     + LN+LANHFF+  +   
Sbjct: 448  DKENVSALVALAILDMNTLEQEAIRRGVESFGRAYQIEQENPVVLNHLANHFFYKKELDR 507

Query: 242  VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            VE L   A  +T++   ++ S Y LAR+                          F+ PY+
Sbjct: 508  VEHLAWHAFQITDNEAMRAESCYQLART-------------------------NFVLPYF 542

Query: 302  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIE------KAQE 352
            GLGQ+ +   D+ +A+  FEKVL+  P N +TLK LG +Y       Q E      KA+E
Sbjct: 543  GLGQMYICREDYDNAIQCFEKVLKACPTNYDTLKILGSLYAHSEPANQKERSERRKKARE 602

Query: 353  LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGV 411
            + +K  ++ P D +A IDL +L  + D   +LDA+  A T L +  E ++P E+ NN+G 
Sbjct: 603  IFKKVVEMCPDDVEALIDLAQLTENCDPQGSLDAYTKASTFLSQMIEVDIPPEITNNVGS 662

Query: 412  IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
            ++F  G++E A + F++AL +      L     T   D +A  LQ               
Sbjct: 663  LYFTVGQYEKAREYFEEALKE------LGEVVSTGQTDLAA--LQ--------------- 699

Query: 472  HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
                     TV +NLAR LE +     A  LY+ IL +  +Y+D Y+RL  +A+ +  + 
Sbjct: 700  --------TTVTYNLARSLEMLCMFDEAERLYKGILQEKPNYIDCYMRLGCLARDKGQIY 751

Query: 532  LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLG 590
             S     E + VN  + +A S++G+L +   +W  A++ F       +   D Y+ ++LG
Sbjct: 752  ESSVWFKEGMSVNQSHADAWSLIGNLHMSKFEWAPAQKKFEYILKLPEYHDDPYSFVALG 811

Query: 591  NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 650
            N  +   L +  R  + +  + E+A  +Y++ +  H  N++AANG G +LA+KG    ++
Sbjct: 812  NI-WLETLSSIHRKKEKDKDYRERALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEAR 870

Query: 651  DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 710
            D+F QV+EA +        DVWIN+AHVY  Q  +  A++MY NC++KF  + D  +LLY
Sbjct: 871  DIFAQVREATA-----DFSDVWINIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVSLLLY 925

Query: 711  LARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRST 770
            LAR HY+A ++ +C+  L +AI  AP N  L+F+    +QK +   L+  + + + V   
Sbjct: 926  LARAHYKAGKFSECRHILEKAICEAPDNMMLKFNHAFVLQKLATQMLRDDKSSLEMVTGA 985

Query: 771  VAELENAVRVFSHLSAASNLHLHG---FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQ 827
            V +L  A  +F ++S   +  +            +    C  LL  A+ + + A+ ++++
Sbjct: 986  VDDLRTAATIFEYISRNKDDTMSQARIVSRTASASEARACYDLLTQAQTYLQRAKAQDEE 1045

Query: 828  NRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQ-KRLRQQEEHFQRVKEQWRSST 886
             +++++   +   A   +R+ E++ K   EK + E E  K++RQ  E+ ++ KE  R  T
Sbjct: 1046 EQRQRQRQEEERQA--LKRQQEQEAKEREEKARRELEVLKQMRQ--EYVEKTKEILRLPT 1101

Query: 887  PASKRRERSENDDDEVGHSEKRRRKGGKRRKKDK 920
                               E++R +G  RR+KD+
Sbjct: 1102 IV-----------------EEKRVRGSGRRRKDR 1118


>gi|195995663|ref|XP_002107700.1| hypothetical protein TRIADDRAFT_18957 [Trichoplax adhaerens]
 gi|190588476|gb|EDV28498.1| hypothetical protein TRIADDRAFT_18957 [Trichoplax adhaerens]
          Length = 938

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 293/900 (32%), Positives = 476/900 (52%), Gaps = 64/900 (7%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           + ++Y+K G+ + F  +LE      + +Y  D   + +  L++L  Y+  LGK  + +  
Sbjct: 48  LAQQYYKHGQQDAFLSVLEAAVEEAVVDY-PDSDRDLMTSLDSLANYFVELGKKASNKDL 106

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL-EADRDNVPA 119
             E F  A   ++K  +I MH     V +G   LA G+ EQA + F  VL + ++ N PA
Sbjct: 107 TREFFGKAALLFSKGDKIIMHHEGHLVSRGWFYLADGKFEQAEAQFNFVLTQLNKKNPPA 166

Query: 120 LLG-QACVEFNRGRYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKAR-QAFQ 176
           LLG +A + FNR  Y+++L  YK  L++ P +CP  +RLGIG C  +L +   AR QAF+
Sbjct: 167 LLGRKATILFNRKDYNEALNLYKEVLRLKPKTCPANVRLGIGHCYARLNKFDLARLQAFE 226

Query: 177 RALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 236
           R LQLDP+ V A+VALAV++L    A  IR G++ + RA+ I    AMALN+LANHFF+ 
Sbjct: 227 RTLQLDPKCVGAMVALAVLELNTKVADSIRNGVDLLSRAYTIDQTNAMALNHLANHFFYK 286

Query: 237 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
             +  V+ L   A   TN  P ++ S Y LAR +HS  DY++A  YY  + +  +    +
Sbjct: 287 KDYDKVQHLALHAFHSTNVEPIQAESCYQLARVFHSMQDYDQAFKYYYQATQFADS--NY 344

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQEL 353
           + P++GLGQ+ L   D  +A ++FEKVL++  DN E++K LG IY +    EK   A+ L
Sbjct: 345 VLPHFGLGQLYLTRNDSANAASSFEKVLKVQSDNYESMKILGSIYARSNNEEKRERAKIL 404

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVI 412
           L+KA    P D +A+I+L  +L  SD   AL A+ T+  LL++  E ++P E+LNN   +
Sbjct: 405 LQKATTQHPDDIEAWIELAGILEGSDIQGALSAYGTSSRLLQETLETDIPPEILNNAAAL 464

Query: 413 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 472
           HF  G F  A ++F  AL           + K    +++     F  +            
Sbjct: 465 HFRLGNFLEAMKNFSAAL----------ERAKLEANESTEGSSYFNTI------------ 502

Query: 473 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 532
                  VT+ +N+ARL E + +   A  LY+ IL  + +Y+D YLRL  +A+ + +   
Sbjct: 503 ------SVTITYNVARLHEALCEHDEAEKLYKQILKDHPNYIDCYLRLGCMARDKGHFYE 556

Query: 533 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGN 591
           + +   EAL +  ++ +  S++G+L +   +W  A++ + R  +   D  D+Y  +++GN
Sbjct: 557 ASDWYTEALVIEREHKDTWSLIGNLHMMKQEWGPAQKKYERILNQNKD--DTYGLVAMGN 614

Query: 592 WNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 651
             +   L    + P     H ++A  LY +VI     N+YAANG G VLA+      S++
Sbjct: 615 I-WLQTLYQPTKDPDKNRRHRDRALSLYKQVIRLDPRNIYAANGIGAVLAQSSFHQESRE 673

Query: 652 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYL 711
           +F QV+EA +      M DVW+NLAHVY  Q  +++A++MY++C+ +F  N + ++LLYL
Sbjct: 674 IFAQVREATA-----DMFDVWLNLAHVYTEQQQYSIAIQMYRSCIERFSMNQNTEVLLYL 728

Query: 712 ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTV 771
           AR +++  + Q+C + L++A H+AP    L F+  + +Q  +   L+      ++++  +
Sbjct: 729 ARAYFKDGRLQNCNRILVKAFHIAPQETLLLFNICLVLQCMAVVVLEDEYNQVEDIKEAI 788

Query: 772 AELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQR 831
            +L+ A + F+ L    +     FD  +      +C  LL  A+ H   A       RQ+
Sbjct: 789 EQLKLAHKYFTFLGETGD--KTKFDLDQATAESRHCSDLLSQAQYHVTRAS-----TRQK 841

Query: 832 QEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKR 891
           +E         E  RK EE     +EKRK  DE  R  + E   + + EQ      A+K+
Sbjct: 842 EEL--------ELIRKYEENYLASIEKRK-TDELHRQCEMEAKTRVINEQRNQYVEATKK 892


>gi|312385821|gb|EFR30226.1| hypothetical protein AND_00290 [Anopheles darlingi]
          Length = 1122

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 278/847 (32%), Positives = 456/847 (53%), Gaps = 68/847 (8%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+KQ K + F +ILE  S  + +  Y D   +++   + L  YY      E  + +K E 
Sbjct: 97  YYKQKKTDDFIKILE-ASRTDANTNYRDFEKDQMRAYDMLAAYYVQEANREKSKDKKREL 155

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQ 123
           F+ AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL     N+P+LLG+
Sbjct: 156 FMKATLLYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGK 215

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KA+ AFQRAL L+P
Sbjct: 216 ACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFLKLNNQEKAKLAFQRALDLEP 275

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           + V ALV LA++ L  +E    R G++ + +A+ I     M LN+LANHFFF   +  V+
Sbjct: 276 QCVGALVGLAILKLNLHEPDSNRMGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQ 335

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A   T +   ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++GL
Sbjct: 336 HLALHAFHNTENEAMRAESCYQLARAFHVQHDYDQAFQYYYQSTQ--FAPANFVLPHFGL 393

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI 360
           GQ+ +  GD        E VL+  P N ET+K LG +Y       K   A+  L+K  + 
Sbjct: 394 GQMYIYRGD-------SENVLKAQPGNYETMKILGSLYATSSSQSKRDIAKNHLKKVTEQ 446

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLL-KKAGEEVPIEVLNNIGVIHFEKGEF 419
            P D +A+I+L ++L  +D   +L A+ TA ++L +K   ++P E+LNN+  +H+ +G  
Sbjct: 447 LPEDVEAWIELAQILEQNDLVGSLQAYGTATSILTEKVNADIPPEILNNVAALHYRQGNL 506

Query: 420 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 479
           E +    + A                  I+ + +  Q  D Q +                
Sbjct: 507 EESMAKLQQA------------------IECAKAEAQH-DAQYYDSIS------------ 535

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           VT+ +NLARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +
Sbjct: 536 VTMTYNLARLYEAMAAFDKADKLYKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKD 595

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAAL 598
           ALK+N + P+  S+LG+L L    W   ++ F     +     D+Y+ ++LGN+ +  +L
Sbjct: 596 ALKINMENPDTRSLLGNLHLAKMQWTLGQKNFETILKNPATSSDAYSLIALGNF-WLQSL 654

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
               R  + E  H EKA  +Y +V+     N++AANG G VLA KG    ++D+F QV+E
Sbjct: 655 HQPNRDKEKEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVRE 714

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
           A +     +  DVWIN+AH+Y  Q  +  A++MY+NCL+KFY + + +++ YLAR ++ A
Sbjct: 715 ATA-----EFCDVWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNVEVMQYLARAYFRA 769

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
            + ++ K +LL+A  +AP +  L F+  + +Q+ + + L+  +     V   V EL  A 
Sbjct: 770 GKLKEAKMTLLKARRVAPQDTVLLFNIALVLQRLATAVLRDEKSVLSVVLQAVHELGLAH 829

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQ 830
           + F++LS      +HG D+ + N  +       C+ LL  A+ H   A +   EE+  RQ
Sbjct: 830 KYFTYLS------VHG-DKTRYNIALAEGEANQCQDLLQQAQYHVSRARKIDEEERSLRQ 882

Query: 831 RQEAARQ 837
           +QE  R+
Sbjct: 883 KQELERE 889


>gi|193580212|ref|XP_001944071.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Acyrthosiphon pisum]
          Length = 1173

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 295/940 (31%), Positives = 487/940 (51%), Gaps = 74/940 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+K+G       +LE  S       Y D   +++  L+ L  YY      E  + +K E
Sbjct: 49  EYYKKGNSVALVGLLE-SSRRNASLKYKDSNKDQMRALDMLAAYYVQTANQEKNKDKKRE 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPALLG 122
            F  ATQ Y  A +I M++ +  +G+  L LL  G +EQA + F  VL    +N+PA LG
Sbjct: 108 LFNKATQLYTTADKIIMYDMNHLLGRAFLCLLEGGRIEQADAQFNFVLNQSFNNLPAQLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ F +  Y   L +YK+ L+    CP  +R+G+  C  KLG + KA+ AF+RALQLD
Sbjct: 168 KACIAFIKKDYRGCLAYYKKVLRSSSECPADVRVGMAYCFLKLGNIEKAQLAFERALQLD 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P+ V+ALV LAVM L     A I+ G+  + +A+ I     M LN+L+NHFF+   +   
Sbjct: 228 PKCVDALVGLAVMKLNGESPADIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFYKKDYAKS 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           E L   AL  T +   ++ S Y++AR +H + +Y++A  YY  + +    P  F+ PY+G
Sbjct: 288 ELLARRALQNTENDAMRAESCYHMARVFHVQNNYDQAFQYYYQATQFA--PVTFVLPYFG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A   FEKVL+ +P+N E +K LG +Y +    +K   A+  L+KA +
Sbjct: 346 LGQMYIYGGDKENAAQCFEKVLKAHPENYEAMKILGSLYTKSKSQQKRDIAKSYLKKATE 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEEVPIEVLNNIGVIHFEKGE 418
             P DA+ +I+L ++L +SD  A+L A+  A  L L +A   +  E+LNN+  +++    
Sbjct: 406 HFPDDAEIWIELAQILEASDLHASLSAYGKAMGLILNRANNYISPEILNNVAALNYRLNN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + AH   +++L                    S  M++  D Q ++             N
Sbjct: 466 MDEAHSKLEESLS------------------LSKKMVE-TDPQRYNS------------N 494

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            VT L+NLAR+ E       A   Y+ IL ++ +Y+  YLRL  +A+ RN +  + +   
Sbjct: 495 AVTTLYNLARIYEVQCQFQKAETFYKDILKEHPNYISCYLRLGCMARDRNQIYEASDWFK 554

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAA 597
           EAL+V+ + P+A ++LG+L L   +W   ++ F R   + +   D Y+ ++LGN  +   
Sbjct: 555 EALRVDNENPDAWALLGNLHLAKMEWGPGQKKFERVLKNPSTLNDPYSLIALGNV-WLQT 613

Query: 598 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
           L    R    E  H + A + YT+V+     N++AANG G VLA K   + ++D+F+QV+
Sbjct: 614 LHQPTRNKDQEKRHQDLALQFYTKVLKYDPRNIWAANGIGCVLAYKHCINEARDIFSQVR 673

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           EA S        DVW+N+AH+Y  Q  +  A++MY++C++KF+ + + ++L YL R ++ 
Sbjct: 674 EATS-----DFCDVWLNIAHIYVEQKQYISAIQMYESCIKKFFKHDNVEVLQYLGRAYFR 728

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 777
           A   ++ K+  L+A  +AP +  + ++    +QK +   L+  +    +V     ELE +
Sbjct: 729 AGMLKEAKRVFLKARRVAPQDTIIIYNIAFVLQKLAILILKDEKSNLKDVLKATNELELS 788

Query: 778 VRVFSHLSAASNLHLHG----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQ 830
            + F +LS      +HG    +D    N   + CK LL  A+ H   A +   +E+ +R+
Sbjct: 789 HKYFQYLS------VHGDRMRYDVDLANIEAKQCKDLLSQAQYHVARARKMDNDERDSRR 842

Query: 831 RQEAARQAALAEE------ARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRS 884
           +QE  R+    ++      A +K +EQ+K +L KR+   E K   +    F  V E+   
Sbjct: 843 KQERERELYRVKQIEEQTIALQKQDEQRKEMLLKRQ---EYKEKTKNALVFDTVLEK--- 896

Query: 885 STPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRS 924
             P  K + R EN   + G S      G +  +  KS++S
Sbjct: 897 --PKGKGKRR-ENYGSDSGRSISSVPGGNRSPRPSKSNKS 933


>gi|156543124|ref|XP_001605583.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nasonia
           vitripennis]
          Length = 1215

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 283/900 (31%), Positives = 475/900 (52%), Gaps = 81/900 (9%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+KQ K+E F +ILE   S    EY  D   +++  L+ L  YY      E  + +K++
Sbjct: 50  EYYKQHKIEDFIKILESSRSKANTEY-RDYEKDQMRALDMLAAYYVQEANREKNKDKKKD 108

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLG 122
            F  AT  +  A +I M++ +  + +    L +G +++QA + F  VL    +N+P+LLG
Sbjct: 109 LFTKATSLFIAADKIIMYDQNHLIARAYFCLLEGNKIDQADAQFNFVLNQSPNNIPSLLG 168

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ +N+  Y  +L FY++ L+++P CP  +R+G+G C  KL    KAR A++RALQLD
Sbjct: 169 KACIAYNKKDYRGALTFYRKVLRINPQCPADVRVGMGHCFVKLDNREKARCAYKRALQLD 228

Query: 183 PENVEALVALAVMDL--------QANE-AAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
            ++V ALV LA++ L        Q +E    I+ G++    A+ I     M LN+LANH+
Sbjct: 229 EKSVGALVGLAILKLNEFNDTQDQNSEYENSIKDGIQMFATAYNIDQTNPMVLNHLANHY 288

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
           FF   +   ++L   A   T +   ++ S Y LARS+  +GDY++A  YY  +  +   P
Sbjct: 289 FFKKDYKTTQRLALHAFHNTENESMRAESCYQLARSFQVQGDYDQAFQYYYQAT-QFASP 347

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY---VQLGQIEKA 350
             F+ P+YGLGQ+ +  GD  +A   FEKVL+  P+N ET+K LG +Y   V   + + A
Sbjct: 348 -VFVLPHYGLGQMYIYRGDNENAAQCFEKVLKAQPNNYETMKILGSLYANSVTQSKRDMA 406

Query: 351 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNI 409
           +  L+K  +  P D +A+I+L ++L  SD  A+L A++TA R L +K   E+P E+LNNI
Sbjct: 407 KTFLQKVTEDHPDDVEAWIELAQILEQSDLQASLKAYETATRILNEKIQAEIPPEILNNI 466

Query: 410 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 469
             I +     + A     ++L                                  R + D
Sbjct: 467 AAIQYRLECLDEARNKLTESL---------------------------------ERSKAD 493

Query: 470 GNHVELPWNK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
             H    +N   VT  +NLAR+ E       A  LY+ +L ++ +Y+D YLRL  +A+ +
Sbjct: 494 AEHHPSYYNSIAVTTTYNLARVYEAQCMFDKAEKLYKNVLKEHPNYIDCYLRLGCMARDK 553

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYAT 586
             +  + +   +AL+++ ++P+A S+LG+L L   +W   ++ F R   + +   D+Y+ 
Sbjct: 554 GQIYEASDWFKDALRIDNEHPDAWSLLGNLHLAKQEWGPGQKKFERILRNPSTNNDAYSL 613

Query: 587 LSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 646
           ++LGN  +   +    +    E  H ++A   Y  V+     N++A NG G +LA KG  
Sbjct: 614 IALGNI-WLQTMHQSGKDKDKEKRHQDRAMANYKLVLRNDPKNIWATNGVGCLLAHKGYM 672

Query: 647 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 706
           + ++D+F QV+EA S     ++PDVW+N+AHVY  Q  +  A++MY+NCLRKFY     +
Sbjct: 673 NEARDIFAQVREATS-----ELPDVWLNIAHVYVEQKQYVSAIQMYENCLRKFYKYHHVE 727

Query: 707 ILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADE 766
           IL YLAR + +A + ++ K +LL A  +AP +  L ++    +Q+ +   L+  +     
Sbjct: 728 ILGYLARAYLKAGKLKEAKLTLLTARRVAPQDPVLLYNVAYILQRLATMILKDEKSMLVT 787

Query: 767 VRSTVAELENAVRVFSHLSAASNLHLHGFDEKKI----NTHVEYCKHLLDAAKIHREAAE 822
           V   V EL  + + F +L++          E+K+          C+ LL  A+ H   A 
Sbjct: 788 VLQAVHELGLSQKYFQYLASR---------EEKMKQVAGKEARSCQDLLSQAQYHVARAR 838

Query: 823 R---EEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 879
           R   EE+  R++QE   Q        R+ EEQ+K  +E+ + + E++ L++++E+ ++ K
Sbjct: 839 RMDEEEKMLRKKQEEESQTL----KMRQMEEQRK--MEEIRRQKEEEMLQKRQEYVEKTK 892


>gi|313219659|emb|CBY30580.1| unnamed protein product [Oikopleura dioica]
          Length = 1060

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 294/954 (30%), Positives = 492/954 (51%), Gaps = 77/954 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           E+++Q + ++F+++LEE  S    +Y    + + +  L+ L  Y    GK E  + ++ +
Sbjct: 53  EFWRQDRRDEFQRVLEEARSKAGKDYMGHEK-DTMRCLDTLAAYNVICGKQEVDKEKQTK 111

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQL-LLAKG-EVEQASSAFKIVLEADRDNVPALL 121
            F+ AT  Y  A ++ M++ S  +G+    LL KG +++QA + F  VL+ D +++PALL
Sbjct: 112 FFMEATTLYTLADKVIMYDQSHLLGRACFCLLDKGDQLDQADNQFNFVLDQDPNSIPALL 171

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G+AC+ FN+  +  +L  YK+ L+++P CP  IRLG+GLC Y++ ++GKA  AF RAL++
Sbjct: 172 GKACIAFNKRDFKGALGHYKKCLRLNPGCPADIRLGMGLCFYRMNKIGKAVDAFTRALEI 231

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           D   + ALV LAV++L   +   +R  +     A++I    A+   +LANHFFF  Q   
Sbjct: 232 DKRCLGALVGLAVVNLNDRDVTSVRDAITLFSSAYKIDKKNALVHIHLANHFFFRNQIAK 291

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            +QL   AL  T H   ++ + Y L R +H  GDYE+A  YY  +    + P ++  P+Y
Sbjct: 292 AQQLAFHALHHTEHQQIRAEACYQLGRCHHKSGDYEQAFRYYNQAAN-FSTP-KYALPFY 349

Query: 302 GLGQVQLK---LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLR 355
            LG + L+   L D   A+  FEK+L+ YP+  +T+K LGH+Y      EK   A+  L 
Sbjct: 350 YLGCMYLQRGSLSDIEQAIILFEKILKEYPNEHDTMKVLGHLYANSTDPEKCAMAKTHLE 409

Query: 356 KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 415
           K    +P+D +A ID  ++L       AL+ ++    L++  G EV  E+ NNIG +   
Sbjct: 410 KVVAANPKDWEALIDYAQVLEQFTPEKALETYRRVIQLMEAVGVEVRAEIYNNIGTLQMR 469

Query: 416 KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 475
            G  + A ++ +  L +     LLD     Y                +    N       
Sbjct: 470 LGNLDDARENLQ--LAEEQIKILLDGPEYLY----------------YRSLHN------- 504

Query: 476 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
                TV +N ARL E+++D   A  LY+ I+     Y+DA LRL  + + +  +  + +
Sbjct: 505 -----TVKYNSARLREKMYDFDKAIWLYKEIVNNNPKYIDAILRLGCMHRDKGQIFDASD 559

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGN-WN 593
           L  E L ++ + P+A S++G+L L+  +W   ++ F R         D+YA ++LGN W 
Sbjct: 560 LFKEGLNIDPESPDAWSLIGNLHLEKGEWGTGQKKFERILKAERTANDAYANVALGNVWL 619

Query: 594 YFAAL--RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 651
               +  ++++R  +    H E+A  LY  V+   + N+YAANG G VLA +G    ++D
Sbjct: 620 QMVHMPTKDQERLKR----HQERALTLYKNVLRLDSKNIYAANGLGAVLAHRGYTSEARD 675

Query: 652 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYL 711
           +F+ V+EA S     +M DVW NLAH+Y  Q  F+ A++MY+N +R F    D   L YL
Sbjct: 676 IFSHVREATS-----EMKDVWFNLAHIYVEQKQFSSAIQMYKNAMRTFDLQNDPDCLTYL 730

Query: 712 ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTV 771
           AR  ++     +CK+ L++A  +AP +  + ++  + MQ+ +   L  ++    EV   V
Sbjct: 731 ARALFKNNLMDECKRCLIKARRVAPQDTVVLYNLALVMQQLAERKLTASKSNLKEVVGAV 790

Query: 772 AELENAVRVFSHLSAASNLHLHG----FDEKKINTHVEYCKHLLDAAKIH---REAAERE 824
            +LE + R FS       L +HG    F           CK +L  A I+    + A+ E
Sbjct: 791 RDLELSERYFSW------LQIHGDRTKFALTGAANEARKCKDILTQAHIYVNRAKLADDE 844

Query: 825 EQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQE----EHFQRVKE 880
           E+ +R+R +A+   A  +  +R+ E        +R LE ++   R++     E   +  +
Sbjct: 845 ERAHRERTQASVTQASQKRKQREQERIAAAEAMQRTLEAKRNEYREKTGAVLEKVHQPSQ 904

Query: 881 QWRSSTP----ASKRRERSENDDDEVGHSEKRRRKGG--KRRKKDKSSRSHYET 928
           +++ STP    + K+R+R++ DD  +  +E     G   K RKK K +RS  E+
Sbjct: 905 KFKDSTPRPKSSKKQRKRNDGDDGLINDNESDAEAGSAIKGRKKKKKARSDDES 958


>gi|313232880|emb|CBY09563.1| unnamed protein product [Oikopleura dioica]
          Length = 1060

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 293/950 (30%), Positives = 490/950 (51%), Gaps = 69/950 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           E+++Q + ++F+++LEE  S    +Y    + + +  L+ L  Y    GK E  + ++ +
Sbjct: 53  EFWRQDRRDEFQRVLEEARSKAGKDYMGHEK-DTMRCLDTLAAYNVICGKQEVDKEKQTK 111

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQL-LLAKG-EVEQASSAFKIVLEADRDNVPALL 121
            F+ AT  Y  A ++ M++ S  +G+    LL KG +++QA + F  VL+ D +++PALL
Sbjct: 112 FFMEATTLYTLADKVIMYDQSHLLGRACFCLLDKGDQLDQADNQFNFVLDQDLNSIPALL 171

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G+AC+ FN+  +  +L  YK+ L+++P CP  IRLG+GLC Y++ ++GKA  AF RAL++
Sbjct: 172 GKACIAFNKRDFKGALGHYKKCLRLNPGCPADIRLGMGLCFYRMNKIGKAVDAFTRALEI 231

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           D   + ALV LAV++L   +   +R  +     A++I    A+   +LANHFFF  Q   
Sbjct: 232 DKRCLGALVGLAVVNLNDRDVTSVRDAITLFSSAYKIDKKNALVHIHLANHFFFRNQIAK 291

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            +QL   AL  T H   ++ + Y L R +H  GDYE+A  YY  +    + P ++  P+Y
Sbjct: 292 AQQLAFHALHHTEHQQIRAEACYQLGRCHHKSGDYEQAFRYYNQAAN-FSTP-KYALPFY 349

Query: 302 GLGQVQLK---LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLR 355
            LG + L+   L D   A+  FEK+L+ YP+  +T+K LGH+Y      EK   A+  L 
Sbjct: 350 YLGCMYLQRGSLSDIEQAIILFEKILKEYPNEHDTMKVLGHLYANSTDPEKCAMAKTHLE 409

Query: 356 KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 415
           K    +P+D +A ID  ++L       AL+ ++    L++  G EV  E+ NNIG +   
Sbjct: 410 KVVAANPKDWEALIDYAQVLEQFTPEKALETYRRVIQLMEAVGVEVRAEIYNNIGTLQMR 469

Query: 416 KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 475
            G  + A ++ +  L +     LLD     Y                +    N       
Sbjct: 470 LGNLDDARENLQ--LAEEQIKILLDGPEYLY----------------YRSLHN------- 504

Query: 476 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
                TV +N ARL E+++D   A  LY+ I+     Y+DA LRL  + + +  +  + +
Sbjct: 505 -----TVKYNSARLREKMYDFDKAIWLYKEIVNNNPKYIDAILRLGCMHRDKGQIFDASD 559

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGN-WN 593
           L  E L ++ + P+A S++G+L L+  +W   ++ F R         D+YA ++LGN W 
Sbjct: 560 LFKEGLNIDPESPDAWSLIGNLHLEKGEWGTGQKKFERILKAERTANDAYANVALGNVWL 619

Query: 594 YFAAL--RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 651
               +  ++++R  +    H E+A  LY  V+   + N+YAANG G VLA +G    ++D
Sbjct: 620 QMVHMPTKDQERLKR----HQERALTLYKNVLRLDSKNIYAANGLGAVLAHRGYTSEARD 675

Query: 652 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYL 711
           +F+ V+EA S     +M DVW NLAH+Y  Q  F+ A++MY+N +R F    D   L YL
Sbjct: 676 IFSHVREATS-----EMKDVWFNLAHIYVEQKQFSSAIQMYKNAMRTFDLQNDPDCLTYL 730

Query: 712 ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTV 771
           AR  ++     +CK+ L++A  +AP +  + ++  + MQ+ +   L  ++    EV   V
Sbjct: 731 ARALFKNNLMDECKRCLIKARRVAPQDTVVLYNLALVMQQLAERKLTASKSNLKEVVGAV 790

Query: 772 AELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIH---REAAEREEQQN 828
            +LE + R FS L   SN     F           CK +L  A I+    + A+ EE+ +
Sbjct: 791 RDLELSERYFSWLQ--SNGDRTKFALTGAANEARKCKDILTQAHIYVNRAKLADDEERAH 848

Query: 829 RQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQE----EHFQRVKEQWRS 884
           R+R +A+   A  +  +R+ E        +R LE ++   R++     E   +  ++++ 
Sbjct: 849 RERTQASVTQASQKRKQREQERIAAAEAMQRTLEAKRNEYREKTGAVLEKVHQPSQKFKD 908

Query: 885 STP----ASKRRERSENDDDEVGHSEKRRRKGG--KRRKKDKSSRSHYET 928
            TP    + K+R+R++ DD  +  +E     G   K RKK K +RS  E+
Sbjct: 909 RTPRPKSSKKQRKRNDGDDGLINDNESDAEAGSAIKGRKKKKKARSDDES 958


>gi|145345359|ref|XP_001417181.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577408|gb|ABO95474.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1059

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 284/918 (30%), Positives = 458/918 (49%), Gaps = 66/918 (7%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y ++G    F  ++E   +PEI+E Y +  Y R A+L     Y+      ET    +EE 
Sbjct: 54  YLRRGDARGFETLMEMVCAPEIEEVYREQAYGRAAVLCLYASYWANRAARETDAVSREEG 113

Query: 65  FILATQYYNKASRIDMH-EPSTWVGKGQLLLAKGEVEQASSAFKIVL---EADRDNVPAL 120
           FI A  Y N+A+ I    E    +G+  L  A+G   +        L   +  RDN+  +
Sbjct: 114 FIKAGAYLNQAAGIHRKPEQIVAIGRAHLAFARGATGEGEKLIDQALGLKDDGRDNITPM 173

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           L +A + + + RY D+L +YKRAL+  PS P  +RLGIG C+YKLG    A+ AF R L+
Sbjct: 174 LWKAVLLYKKERYQDALTWYKRALRAFPSAPAPVRLGIGACQYKLGDFKTAKLAFARVLK 233

Query: 181 LDPENVEALVALAVMDLQANEAAG------IRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           LD  NVEA++ LA+ +L  ++         +   M  ++RAF   P+     N ++++  
Sbjct: 234 LDERNVEAMLGLALCELSLHDIRSQQHLDSVAAAMRLLERAFMHDPHNQAVNNVISDNLL 293

Query: 235 FTGQHFLVEQLTETALAVTNHGP-TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
               +  VE+LT  AL      P  ++ + +N AR+ H++G   +A   Y+ +    N  
Sbjct: 294 MADDYEKVEKLTRLALQNNAETPRNRAKAAFNQARALHARGQVPQAQALYLTAT---NLD 350

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
             ++ PY+GLGQ+ L  GD + A    +K    + ++    +   H+    G+ E+A E+
Sbjct: 351 EHYVPPYFGLGQIALAKGDVKLAWNYMDKAHGEFGESMTVTRMFAHLCASTGRSEQAAEM 410

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL-NNIGVI 412
            R+  K    D  A ++LGELL + D  AAL A+  A  +L   GEE PI  + NNIGV+
Sbjct: 411 FREVVKQGGNDVDAMLELGELLETQDPKAALKAYSAALKMLAAKGEEGPITAIKNNIGVL 470

Query: 413 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 472
           + + G+F+ A ++F +AL                 +   A  L+ K      +       
Sbjct: 471 NVQLGKFDEAREAFTEAL---------------QALGGDADQLEGKLKGAKAKKALQPG- 514

Query: 473 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 532
                    + FNLA L EQ  +  AA   Y  IL    DY+D+ LR A I   R +  +
Sbjct: 515 ------VAPIAFNLALLEEQQGNNAAAEARYDAILAAQPDYIDSILRQAKIRAERGDYDM 568

Query: 533 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA------------ASDATDG 580
           ++E  NEA+       +AL++ G + LK   W +A++ F A            A + T  
Sbjct: 569 ALERTNEAIAAKSDSADALALAGWVLLKAKRWSEAEQQFAALRNLPKPDAAANAKEKTLT 628

Query: 581 KDSYATLSLGNWNYFAAL------RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAAN 634
            D YA +S  N  Y++A+      RN+ +  K E  H E+A  L+ + + ++ SN+YAAN
Sbjct: 629 HDEYAMVSAANAAYYSAIKEGVLKRNDPKVLKREEEHYERAYSLFQKTLQKNGSNVYAAN 688

Query: 635 GAGVVLAEKGQFDVSKDLFTQVQE--AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 692
           G G++LAE+G+ D +K +F  VQE  AA GS+    PD+ IN  HVY A+  +  A K+Y
Sbjct: 689 GLGIILAERGRIDEAKTVFQIVQEGMAAKGSI---NPDILINQGHVYLAKAQYVQASKLY 745

Query: 693 QNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 752
           +    +FY+N +  ++LY AR HYE    ++ +K L +A+ +AP N+ +RF+    +Q+ 
Sbjct: 746 ERAQSQFYFNQNENVMLYQARAHYENGNLEEARKILRKALLIAPWNHRIRFNLAYVIQEM 805

Query: 753 SASTLQKTRRTAD------EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEY 806
           +  TL +T ++        +V S + +L  A+++F  L    N    GFD K+ + HV +
Sbjct: 806 AQRTLNRTMKSTSSDGRLAQVESAIEDLTTALKLFEQLQTLGNQAEFGFDAKRTSVHVSF 865

Query: 807 CKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQK 866
           CK  L  +K H EAA++EE      + A   A  A E  R A++  + L ++   ++ + 
Sbjct: 866 CKQALTKSKPHLEAAQKEEASISAAKNAQLTARRAIEEGRAAQKAAEELAKETHAKELEA 925

Query: 867 RLRQQEEHFQRVKEQWRS 884
              Q E  F+  + +W S
Sbjct: 926 IAAQSERRFKESQARWMS 943


>gi|26337079|dbj|BAC32223.1| unnamed protein product [Mus musculus]
          Length = 721

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 254/706 (35%), Positives = 388/706 (54%), Gaps = 54/706 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV+ L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLQLNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGN-V 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVF 670

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 699
            QV+EA +      + DVW+NLAH+Y  Q  +  A++M  + L + 
Sbjct: 671 AQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMVTSLLLRI 711


>gi|320165966|gb|EFW42865.1| phosphoprotein [Capsaspora owczarzaki ATCC 30864]
          Length = 1153

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 294/979 (30%), Positives = 485/979 (49%), Gaps = 92/979 (9%)

Query: 4   EYFKQGKVEQFRQILEEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKE 62
           +Y+ Q   E   Q+L   S +   +  YAD   +R++ILNALG +Y     +E + RE  
Sbjct: 53  QYYNQKMPEACSQLLTAASDAASTEPEYADAIQDRLSILNALGAFYLQQA-VEERDRETR 111

Query: 63  EHFIL-ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           E  +  AT  +N+A  +D+H     VGKG L L +   E+A++ F+ V   +  ++PAL+
Sbjct: 112 EALLQKATSQFNRADTLDVHGTLNMVGKGMLFLLRNNYERAATQFRYVTAQNPAHIPALM 171

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQ 180
           GQAC  +N  ++ ++L  Y+R L+++P+   AI R GIG+C +KL  L +A+ AF+R L+
Sbjct: 172 GQACAAYNLKQFKEALGLYRRVLRINPTGSAAIVRYGIGVCLFKLKDLERAQLAFKRVLE 231

Query: 181 LDPENVEALVALAVMD-------------------------------------LQANEAA 203
           L P+++EA VALA ++                                     LQ    A
Sbjct: 232 LVPDHLEACVALATIEFNTGVDKEASATEMLTGRSAATVANLAPAQISEQASILQQAAVA 291

Query: 204 GIRKGMEKMQRAFEIYPY----CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
            +  GM+ +Q+A++I        AM LN+L+N+FF   +      L  +AL  ++    K
Sbjct: 292 SVTSGMQLLQQAYKISSEENRDNAMLLNHLSNYFFSYRELDKSANLALSALHRSDVDEIK 351

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           + S Y + R +H+  DY++A  +Y  + +  +    F  P +GLGQ+ +K GD   A   
Sbjct: 352 AISCYLIGRKHHAAEDYDQAFQFYYQANRLWDS---FALPQFGLGQLYIKKGDIAKAAEY 408

Query: 320 FEKVLEIYPDNCETLKALGHIYVQL---GQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
            EKVL  +PDN E  K LG +YV      + ++AQ+LL K     P+D +A+I+L +L  
Sbjct: 409 LEKVLVKFPDNYEASKILGSLYVTSQYSNKRQRAQQLLHKITVAQPKDVEAWIELAQLQE 468

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 436
            +D  AAL+A++TA  LL +A  ++  E+LNNI  +  + G+                  
Sbjct: 469 QTDFAAALEAYETAARLLLEADIKIAPEILNNIATLRHKLGQ------------------ 510

Query: 437 TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 496
             LD         A+    Q +D +  +   +  N   L   KVT+ +N ARLLE +++ 
Sbjct: 511 --LDKAQDMNAAAAADVDQQIRDEEQ-NEMVDAQNLRSLNGLKVTIRYNRARLLEDMNNP 567

Query: 497 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 556
             A V+YR ++ ++   +D YLRLAAIAK +  +  + E V E   +    P+A   +G+
Sbjct: 568 ADAEVIYRELIQEHPTLIDCYLRLAAIAKNQGRIAAAAEWVREVFAIQPHNPDAWCFVGN 627

Query: 557 LELKNDDWVKAKETFRAA---SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE 613
           + L   +W  A+  F      +  T+  D Y  ++LGN    +A        +++ +++ 
Sbjct: 628 MHLSRYEWNLAQNKFEMLLKNNGKTNKVDPYPLIALGNIFQQSAQPVSVPKAQMDKSYV- 686

Query: 614 KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
           +A E +T+ + + + N+YAANG   V+AE G    ++D+F +V+E  S S      DVW 
Sbjct: 687 RAAEFFTKALQEDSRNIYAANGLACVMAENGFVKEAEDVFLKVRETTSESA-----DVWT 741

Query: 674 NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIH 733
           NL H+Y +  ++  ++KMY NCLRKF+ + D  +L++LAR HY+ +++  CK  L +A H
Sbjct: 742 NLGHLY-SSYDYTRSVKMYTNCLRKFHNDKDLDVLMHLARVHYQFKKFDACKSVLQQAFH 800

Query: 734 LAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLH 793
           L P    +R+   +  + F+  T  +      +V   +A L+ A +++ +LS        
Sbjct: 801 LHPHETVIRYHLALCEEAFAEHTFAQETLHPRDVTHAIASLQVAHKIYDNLSKYPKSSRL 860

Query: 794 GFDEKKINTHVEYCKHLL-DAAKIHR--EAAEREEQQNRQRQEAARQAALAEEARRKAEE 850
           GF   +          +L  +A++ R  EA E E Q+  Q  E  R+  +  +A  +A  
Sbjct: 861 GFTPARAAQSASRVADMLAQSAQVMRRAEAQEAERQRKAQEHEVLRKNLMERKAADEAVR 920

Query: 851 QKKYLLEKRKL----EDEQKRLRQQEEHFQ---RVKEQWRSSTPASKRRERSENDDDEVG 903
           Q K   E  +L    E  +KR  +    FQ          +S  +S+ R+     DD V 
Sbjct: 921 QSKIAEEHARLALIAETHRKRADEAFAEFQANASAAAAAAASKKSSRGRKADTAMDDFVD 980

Query: 904 HSEKRRRKGGKRRKKDKSS 922
             E  R K G+R K   SS
Sbjct: 981 DEEDSRPKKGRRSKDSGSS 999


>gi|148685055|gb|EDL17002.1| Ctr9, Paf1/RNA polymerase II complex component, homolog (S.
           cerevisiae), isoform CRA_b [Mus musculus]
 gi|149068294|gb|EDM17846.1| SH2 domain binding protein 1 (tetratricopeptide repeat containing),
           isoform CRA_b [Rattus norvegicus]
          Length = 655

 Score =  360 bits (925), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 230/644 (35%), Positives = 352/644 (54%), Gaps = 49/644 (7%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV- 610

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAG 637
           +   L    R  + E  H ++A  +Y +V+     NLYAANG G
Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIG 654


>gi|268573518|ref|XP_002641736.1| Hypothetical protein CBG10075 [Caenorhabditis briggsae]
          Length = 1143

 Score =  358 bits (919), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 249/862 (28%), Positives = 449/862 (52%), Gaps = 59/862 (6%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EYF+Q +V+ F +ILE   +    EY   V+ +++  L+ L  Y+   G  E  + +K++
Sbjct: 60  EYFRQDRVQPFMEILEAAGTRAGLEYDG-VKQDQMRALDILAAYWMTQGYRERAKDKKQD 118

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVP 118
            F  AT  +N A +I M+E S    +    L     +  + E A   F  V++    NV 
Sbjct: 119 FFSKATVLFNTADKIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTYPQNVL 178

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
            L+G+A + FN+  Y  ++ ++++A++        +R+GIG C  K+G + K++ AF+RA
Sbjct: 179 PLIGKAVIAFNKKDYKTAIFYFRKAIRQRRYSIADLRVGIGYCFAKMGLVDKSKLAFERA 238

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           L+L+P+NV A+  L ++ L   E   ++  +    RA+   P   +AL +LANHFFF G+
Sbjct: 239 LELEPDNVSAMCGLGIILLNTLEQDNLKIAVNLFGRAYHAQPDQPVALVHLANHFFFKGE 298

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
                QL+  A A  +    K+ ++Y + R  H++G Y+ A  YY  + +  N+ H    
Sbjct: 299 VERAWQLSWHA-ASNDCDSIKAEAFYQMGRCRHTQGQYDGAYKYYYQARQANNQEH--TL 355

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY--VQLGQI-------EK 349
            +YGLGQ+ +   +   A+  FE V +  P N +T+K LG +Y  VQL          +K
Sbjct: 356 AHYGLGQMYIHRNEIEEAIKCFEVVHQRLPHNTDTMKILGSLYAHVQLADPARTNEARQK 415

Query: 350 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLN 407
            +++L K   I+  D +A IDL +LL S+D+  +L+ ++ A  LL +A E++P   E+LN
Sbjct: 416 GRDVLAKYLNIEAEDCEACIDLAQLLESTDSKKSLELYERAIDLL-EAFEQIPPQPEMLN 474

Query: 408 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 467
           N+G +H    +F+ A   FK A              ++     S+   QF D     R  
Sbjct: 475 NVGALHMSMKQFDKAEHYFKKA-------------KESLEEQLSSEAAQFSD----RRAA 517

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
            + +H+      +T+ +NLAR LE +  T  A  +Y+ I+ +   Y D YLRL  IA+ R
Sbjct: 518 PERSHL------LTIRYNLARCLEHLCRTSEAEQMYKDIISECPGYTDGYLRLGCIARDR 571

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSY 584
           + +  +     + ++ +   P   +++G+L    ++W+ A++ F    S   + K  D Y
Sbjct: 572 HQVYEASLSFKQGVQFDQSSPVVWTLIGNLHYAKNEWMPAQKKFEFILSKIYNNKTPDPY 631

Query: 585 ATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 644
           + ++LGN  +   L N  R  + E  ++++A ++Y + +     N+YAANG G VLA K 
Sbjct: 632 SLVALGN-VWIEQLLNPSRKKEDEKKYMDRALQMYQKALKLEPKNMYAANGIGCVLAYKR 690

Query: 645 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 704
            ++ ++D+F+QV+E+ S     +  DVW+N+AHV+  +  +  A++MY + ++KF    D
Sbjct: 691 NWNDARDVFSQVRESTS-----EFYDVWMNIAHVFMEREQWMSAVQMYSSAMKKFRKEND 745

Query: 705 AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTA 764
           A +L YLA+ +Y A    + K++L RA+     N  L+F+  + ++K +   L+  + T+
Sbjct: 746 AMLLHYLAKAYYRANMLSEAKEALERAMLDQLDNTQLKFNYAIVLKKSAKEILRGHKMTS 805

Query: 765 DEVRSTVAELENAVRVFSHLSA-----ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHRE 819
            +V + +++L  A ++F ++S      AS+  +        +   + C+ LL  AK    
Sbjct: 806 QQVNTAISDLTFAEKIFQYISKNDDRQASHTGMR-ISRTACSEEAKNCRDLLTQAKHKLA 864

Query: 820 AAEREEQQNRQRQEAARQAALA 841
           AA+ ++++ R+  E   +  +A
Sbjct: 865 AAQTQDEEERRLIEKQEKEKIA 886


>gi|405973169|gb|EKC37899.1| RNA polymerase-associated protein CTR9-like protein [Crassostrea
           gigas]
          Length = 679

 Score =  352 bits (902), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 217/649 (33%), Positives = 347/649 (53%), Gaps = 45/649 (6%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+KQ  V+ F +IL+  S  +    Y +   +++  L+ L  YY   G  E  + +K E
Sbjct: 49  EYYKQNYVQDFVKILD-ASRTDAGLDYPNFERDQMRALDTLAAYYVQKGHKEKNKDKKRE 107

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 122
            F  AT  Y  A RI M++ +  +G+    L +G+ +EQA + F  VL    +N+P+LLG
Sbjct: 108 LFTQATLLYTTADRIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLGQANNNIPSLLG 167

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +AC+ FN+  Y  +L +YK+AL+ + +CP ++RLG+G C  KL +L KAR AF+RALQLD
Sbjct: 168 KACIAFNKKDYRGALAYYKKALKTNHNCPASVRLGLGHCFVKLNRLEKARMAFERALQLD 227

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
            + V AL+ LA+++L +     I+ G++ + +A+ I     M LN+LANHFF+   +  V
Sbjct: 228 SQCVGALIGLAILELNSKTQDSIKNGVQLLSKAYTIDSTNPMILNHLANHFFYKKDYQKV 287

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + L   +   T +   ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++G
Sbjct: 288 QHLALHSFHNTENEGMRAESCYQLARAFHVQQDYDQAFQYYYQSTQ--FAPPNFVLPFFG 345

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 359
           LGQ+ +  GD  +A T FEKVL+    N ET+K LG +Y       K   AQ+ L+K  +
Sbjct: 346 LGQMYIYRGDNENASTCFEKVLKAQSGNYETMKILGSLYANSSDPAKRDIAQQHLKKVTE 405

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGE 418
             P D +A+I+L ++L   D   AL A+ TA  +LK+  E +VP E+LNN+  +HF  G 
Sbjct: 406 QFPDDVEAWIELAQILEQQDVQGALSAYGTATRILKEKVEADVPPEILNNVAALHFRLGN 465

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A + ++ +L                                  R  ++  H E  ++
Sbjct: 466 LQEARKCYEASL---------------------------------ERSRSEAQHDETYYS 492

Query: 479 --KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
              VT  +NLARL E  H+   A  LY+ IL  + +YVD YLRL  +A+ R  +  + + 
Sbjct: 493 AISVTTTYNLARLYEATHEYDDAERLYKSILRDHPNYVDCYLRLGCMARERGQIYEASDW 552

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 595
             EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ ++LGN  + 
Sbjct: 553 FKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERIIGRPNTKDDAYSLIALGNV-WL 611

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 644
             L    R    E  H E+A  +Y +V+     N++AANG  ++    G
Sbjct: 612 QTLHTPMRDKDKEKRHQERALAMYKQVLRNDDRNIWAANGIVLIAIVAG 660



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 92/457 (20%), Positives = 182/457 (39%), Gaps = 82/457 (17%)

Query: 312 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           D+R AL  ++K L+   +   +++  LGH +V+L ++EKA+    +A ++D +   A I 
Sbjct: 177 DYRGALAYYKKALKTNHNCPASVRLGLGHCFVKLNRLEKARMAFERALQLDSQCVGALIG 236

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAG--EEVPIEVLNNIGVIHFEKGEFES----AHQ 424
           L  L ++S T    D+ K    LL KA   +     +LN++    F K +++     A  
Sbjct: 237 LAILELNSKTQ---DSIKNGVQLLSKAYTIDSTNPMILNHLANHFFYKKDYQKVQHLALH 293

Query: 425 SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 484
           SF +   +G+       + ++    A A  +Q    Q F  +         P N V   F
Sbjct: 294 SFHNTENEGM-------RAESCYQLARAFHVQQDYDQAFQYYYQSTQFA--PPNFVLPFF 344

Query: 485 NLARLLEQIHDTVAASVLYRLILF------------------------------------ 508
            L ++     D   AS  +  +L                                     
Sbjct: 345 GLGQMYIYRGDNENASTCFEKVLKAQSGNYETMKILGSLYANSSDPAKRDIAQQHLKKVT 404

Query: 509 -KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY------PNALSMLGDLELKN 561
            ++ D V+A++ LA I + + ++Q ++     A ++  +       P  L+ +  L  + 
Sbjct: 405 EQFPDDVEAWIELAQILE-QQDVQGALSAYGTATRILKEKVEADVPPEILNNVAALHFRL 463

Query: 562 DDWVKAKETF-----RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH-LEKA 615
            +  +A++ +     R+ S+A   +  Y+ +S+      A L         EATH  + A
Sbjct: 464 GNLQEARKCYEASLERSRSEAQHDETYYSAISVTTTYNLARL--------YEATHEYDDA 515

Query: 616 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
           + LY  ++  H + +      G +  E+GQ   + D F +  +     +    PD W  +
Sbjct: 516 ERLYKSILRDHPNYVDCYLRLGCMARERGQIYEASDWFKEALQ-----INQDHPDAWSLI 570

Query: 676 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 712
            +++ A+  +    K ++  + +     DA  L+ L 
Sbjct: 571 GNLHLAKQEWGPGQKKFERIIGRPNTKDDAYSLIALG 607


>gi|341877740|gb|EGT33675.1| hypothetical protein CAEBREN_09711 [Caenorhabditis brenneri]
          Length = 1297

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 241/853 (28%), Positives = 434/853 (50%), Gaps = 67/853 (7%)

Query: 4    EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
            EY++QG+V+ F  ILE   S    EY   V+ +++  L+ L  Y+   G  E  + +K++
Sbjct: 210  EYYRQGRVDPFMTILESAGSRAGLEYIG-VKQDQMRALDILAAYWMTQGYREKTKDKKQD 268

Query: 64   HFILATQYYNKASRIDMHEPSTWVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVP 118
             F  AT  +N A +I M+E S    +    L     +  + E A   F  V++    NV 
Sbjct: 269  FFSKATVLFNTADKIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTYPQNVL 328

Query: 119  ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
             L+G+A + FN+  Y  ++ F+++A++        +R+GIG C  KLG + KA+ AFQRA
Sbjct: 329  PLIGKAVIAFNKKDYKTAVYFFRKAIRQRHHSIADLRVGIGHCYAKLGFMDKAKLAFQRA 388

Query: 179  LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            L+++ ENV A+  L ++ +   + A +   ++   +++ +     +AL +LANHFFF G+
Sbjct: 389  LEIESENVSAMCGLGIILMNTLDPANLHAAVKLFGKSYNLQADHPVALVHLANHFFFKGE 448

Query: 239  HFLVEQLTETALAVTNHGPT-------KSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
                   TE A  +  H  T       K+ ++Y + R  HS+G YE A  YY  + +  N
Sbjct: 449  -------TERAWTLAWHAATFNECDSIKAEAFYQMGRCRHSQGQYEGAYKYYYQARQANN 501

Query: 292  KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
              H     +YGLGQ+ +   +   A+  FE V +  P+N +T+K LG +Y  +   ++ Q
Sbjct: 502  GEH--TLAHYGLGQMYIHRNEIEDAIKCFETVHQRLPNNVDTMKILGSLYANVQYNDQTQ 559

Query: 352  ---------ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 402
                     E+L K   ++  D +A IDL +LL +SD   AL+ +++A +LL+   +  P
Sbjct: 560  TNEARQKGREVLAKYLTLENEDYEACIDLAQLLEASDPKKALELYQSAISLLEGLEQIQP 619

Query: 403  -IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
              E+LNN+G ++    +++ A + FK A            K +   + ++    Q     
Sbjct: 620  QPEMLNNVGALYMSMKQYDKAEEHFKKA------------KERLEDLLSTEEGAQL---- 663

Query: 462  LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
            L  R   +  H+      +T+ +NLAR LE +  T  A  +Y+ I+ +   Y+D YLRL 
Sbjct: 664  LSRRTPPEKTHL------LTIRYNLARCLEHLCRTSEAEQMYKDIVNECPGYIDGYLRLG 717

Query: 522  AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDG 580
             I + R+ +  S   + E+++ +   P   +++G+L     +W+ A++ F    S   + 
Sbjct: 718  CITRDRHQVYDSSLWLKESVRFDQSSPVVWTLIGNLHFSKSEWMPAQKKFEFILSKIYNN 777

Query: 581  K--DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGV 638
            K  D Y+ ++LGN  +F  L N  R  + E  ++++A ++Y + +     N+YAANG G 
Sbjct: 778  KTPDPYSLVALGN-VWFEQLLNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGC 836

Query: 639  VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 698
            VLA K  ++ ++D+F+QV+E+ S     +  DVW+N+AHV   +  +  A++MY + ++K
Sbjct: 837  VLAYKRNWNDARDVFSQVRESTS-----EFYDVWLNIAHVCMEREQWMAAVQMYSSAMKK 891

Query: 699  FYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQ 758
            F    D+ +L YLA+ +Y A    + K++L  A+     N  L+F+  + ++K +   L+
Sbjct: 892  FKKEADSVLLHYLAKAYYRANMLNEAKEALEIAMLDHLDNIQLKFNYAIVLKKMAKEVLR 951

Query: 759  KTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG----FDEKKINTHVEYCKHLLDAA 814
              + T+ +V   + +L  A ++F ++S   +   H           +   + CK LL  A
Sbjct: 952  GQKMTSKQVNCAIQDLTFAEKIFDYISKNDDRQSHHSGMRISRTICSEEAKNCKDLLTQA 1011

Query: 815  KIHREAAEREEQQ 827
                 AA+ ++++
Sbjct: 1012 NHKLTAAQSQDEE 1024


>gi|328701581|ref|XP_003241648.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
           [Acyrthosiphon pisum]
          Length = 975

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 222/714 (31%), Positives = 377/714 (52%), Gaps = 55/714 (7%)

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
           C  KLG   KAR AF+RA+QLD + V ALV LA++ L       I+ G+  + +A+ I  
Sbjct: 4   CFLKLGNAEKARLAFERAIQLDSKCVGALVGLAILKLNGENPGDIKLGVNMLSKAYTIDT 63

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 280
              M LN+L+NHFFF   +   E L   AL  T +   ++ S Y +AR++H + +Y++A 
Sbjct: 64  TNPMVLNHLSNHFFFKKDYTKYELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAF 123

Query: 281 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
            YY  + +    P  F+ P+YGLGQ+ +  GD  +A   FEKVL+ +P N E +K LG +
Sbjct: 124 QYYYQATQFA--PVTFVLPHYGLGQMYIYGGDMENAAQCFEKVLKAHPGNYEAMKILGSL 181

Query: 341 YVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-K 396
           Y      +K   A+  L+K  +  P D +A+I+L ++L  SD   +L A+     L++ +
Sbjct: 182 YANSKNQQKRDIAKSHLKKVTEHFPDDVEAWIELAQILEQSDLQGSLSAYGKVIVLMRNQ 241

Query: 397 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
               +P E+LNN+  ++F     + A    +++L                    S  M++
Sbjct: 242 VNNYIPPEILNNVAALNFRLQNMDEARSKLEESLS------------------LSKKMVE 283

Query: 457 FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 516
             D Q ++               VT  FNLAR+ E       A   Y+ IL ++ +Y+D 
Sbjct: 284 -ADPQYYNSIA------------VTTTFNLARIFEAQCQFQKAETFYKDILKEHPNYIDC 330

Query: 517 YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAAS 575
           YLRL  +A+ RN +  + +   EAL+++ ++P+A S+LG+L L   +W   ++ F R   
Sbjct: 331 YLRLGCMARDRNQIYEASDWFKEALRIDNEHPDAWSLLGNLHLAKMEWGPGQKKFERVLK 390

Query: 576 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 635
           + +   DSY+ ++LGN  +   L    R  + E  H + A + +T+V+     N++AANG
Sbjct: 391 NPSTLNDSYSLIALGNV-WLQTLHQPTRNKEQEKRHQDLALQFFTKVLKNDPKNIWAANG 449

Query: 636 AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 695
            G V+A K   + ++D+F QV+EA +        DVW+N+AH+Y  Q  +  A++MY+NC
Sbjct: 450 IGCVMAHKQYINEARDIFAQVREATA-----DFCDVWLNIAHIYIEQKQYISAIQMYENC 504

Query: 696 LRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAS 755
           ++KF+ + + +IL YL R +++A + ++ KK  L+A  +AP +  + ++    +QK SA 
Sbjct: 505 IKKFFKHDNVEILQYLGRAYFKAGKLKEAKKVFLKARRVAPQDLVIIYNIAFVLQKLSAQ 564

Query: 756 TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAK 815
           TL+  +    +V   V EL  + + F +L  A N     +D    +   + C+ LL  A+
Sbjct: 565 TLKDGKSNLKDVLKAVHELGLSHKYFQYL--AVNGDRMRYDVNLADFEAKQCQDLLSQAQ 622

Query: 816 IHREAAER---EEQQNRQRQEAARQAALAEE------ARRKAEEQKKYLLEKRK 860
            H   A +   +E++ R++QE  R++   ++      A +K EEQ+K +L KR+
Sbjct: 623 YHVARARKMDHDEREMRRKQEEERESLRVKQIEEQTKALQKQEEQRKEMLLKRQ 676



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 64/312 (20%), Positives = 134/312 (42%), Gaps = 46/312 (14%)

Query: 70  QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 129
           QYYN  +       +T     ++  A+ + ++A + +K +L+   + +   L   C+  +
Sbjct: 287 QYYNSIA------VTTTFNLARIFEAQCQFQKAETFYKDILKEHPNYIDCYLRLGCMARD 340

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE-- 187
           R +  ++ +++K AL++    P A  L   L   K+ + G  ++ F+R L+ +P  +   
Sbjct: 341 RNQIYEASDWFKEALRIDNEHPDAWSLLGNLHLAKM-EWGPGQKKFERVLK-NPSTLNDS 398

Query: 188 -ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            +L+AL  + LQ        K  EK  +   +               FFT    +++   
Sbjct: 399 YSLIALGNVWLQTLHQPTRNKEQEKRHQDLALQ--------------FFTK---VLKNDP 441

Query: 247 ETALAVTNHGPTKSHS-YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
           +   A    G   +H  Y N AR                A V+E     +F   +  +  
Sbjct: 442 KNIWAANGIGCVMAHKQYINEARDI-------------FAQVREATA--DFCDVWLNIAH 486

Query: 306 VQLKLGDFRSALTNFEKVLEIY--PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           + ++   + SA+  +E  ++ +   DN E L+ LG  Y + G++++A+++  KA ++ P+
Sbjct: 487 IYIEQKQYISAIQMYENCIKKFFKHDNVEILQYLGRAYFKAGKLKEAKKVFLKARRVAPQ 546

Query: 364 DAQAFIDLGELL 375
           D     ++  +L
Sbjct: 547 DLVIIYNIAFVL 558


>gi|74213733|dbj|BAC39065.2| unnamed protein product [Mus musculus]
          Length = 622

 Score =  340 bits (872), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 216/600 (36%), Positives = 331/600 (55%), Gaps = 49/600 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGN-W 592
           +   EAL++N  +P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN W
Sbjct: 552 DWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNVW 611


>gi|290994703|ref|XP_002679971.1| predicted protein [Naegleria gruberi]
 gi|284093590|gb|EFC47227.1| predicted protein [Naegleria gruberi]
          Length = 1064

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 232/825 (28%), Positives = 417/825 (50%), Gaps = 67/825 (8%)

Query: 74  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
           KA + +  + S +  +G L L  G +++A S+F  ++  D+DN+ + LG AC+++++ +Y
Sbjct: 142 KAEQFNPSKLSNFYSRGVLHLNLGALDKAESSFDYIITVDKDNILSKLGMACIKYHKKQY 201

Query: 134 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
            ++L  +++ L ++P  P  IRLG+GLC Y+L    +A+Q F+R LQLDP NV AL+ LA
Sbjct: 202 KEALSEFEQCLLMNPQGPADIRLGMGLCHYQLDNFERAKQCFERVLQLDPNNVSALIYLA 261

Query: 194 VMDLQANEAAGIRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
           ++DL + +   ++  ++  ++RA+ + P  +  LN L NHFFF  +    E+L   A   
Sbjct: 262 IIDLNSRDEELLQNAVKNYLKRAYSLDPGNSQVLNLLGNHFFFRREVDKTEELVFAAFHN 321

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
           T     K+ S YN+AR+YH K DY+ A  YY   V  +    E+    YGLGQ+ ++  +
Sbjct: 322 TKSPKIKAESCYNMARAYHHKKDYDSAFKYYYRIVSRL--WPEYTLARYGLGQLYIQRNE 379

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
              A+  FE++L++ P+N ET  ALG++Y +    +K+   L+K  K DP +  A + +G
Sbjct: 380 IDKAVEEFEQILKVDPENLETNLALGNLYARKRDSKKSLAYLKKVLKKDPENINALLRIG 439

Query: 373 ELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 430
           E         ALD+ K A T++++   E+ +  E+ NNI V +++ G+   + + FK AL
Sbjct: 440 EHE-RHQIQLALDSLKEALTIIEEGETELVVTHELYNNIAVHYYKLGKNTESEEYFKKAL 498

Query: 431 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
                     S  +  V+D                   D  H  +    +++++N AR  
Sbjct: 499 ----------SLAECNVMDNL-----------------DDLHQAIEVKHLSLVYNFARFK 531

Query: 491 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
           E       A  LY  I+ ++  Y++AYLRL  I +   N + +I     A  +       
Sbjct: 532 EVSKSLDDAQKLYLKIVAQHPSYINAYLRLGKIQQKNGNHEKAIHFCKLATSLEPNNAAT 591

Query: 551 LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAP----- 605
            + LG   L+ +++ +A++ F   +   D  D YA L +GN  YF +LR  K  P     
Sbjct: 592 WAFLGQTYLEQNNYTEAQKAFEYITQNIDKNDIYALLGMGNV-YFKSLRTAKPNPDEKEQ 650

Query: 606 -KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSV 664
            ++E  HL+ A   + + +    SN+YAA  +G VL E G  +  K L ++V+E   G  
Sbjct: 651 ERIEK-HLDYALLFFEKTLKLDNSNMYAALNSGCVLCENGYTEEGKALISRVREICVGDD 709

Query: 665 FVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDC 724
               P+ +INL H+   Q  F+ A K+Y  C ++F+ + +  +L YLA++ ++  + ++ 
Sbjct: 710 MKDTPETYINLGHLAMIQKQFSQAEKLYSTCSKRFFNDENPMVLAYLAKSLFDNNKHEES 769

Query: 725 KKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHL 784
              L +      +N T++++  +A  +   +TL  + +   +V+    + +  + +FS +
Sbjct: 770 LNILKKIQEQDATNLTIKYNIALAFYEKLVATLNDSNKDLTKVQILEDQNQTIINLFSEI 829

Query: 785 SAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREA--------AEREEQQNRQRQEAAR 836
           +  +N         K N+    C+  LD   +  +A         + +E+  + R++A +
Sbjct: 830 AENTN--------SKKNS----CEFSLDEKIVVHKAKDFITVLETKIKEKIEKYREKAEK 877

Query: 837 QAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQ 881
           +     E ++K E+  K + E+ K     K+L  QEE  +RVKE+
Sbjct: 878 EELARHELKKKQEDAFKIIEEQTK-----KQLEDQEE-LRRVKEE 916



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 36/251 (14%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LGKI+ K    E+    A  +   A+ ++ +  +TW   GQ  L +    +A  AF+
Sbjct: 558 YLRLGKIQQKNGNHEK----AIHFCKLATSLEPNNAATWAFLGQTYLEQNNYTEAQKAFE 613

Query: 108 IVLE-ADRDNVPALLGQACVEFNRGRYSD-----------------SLEFYKRALQVHPS 149
            + +  D++++ ALLG   V F   R +                  +L F+++ L++  S
Sbjct: 614 YITQNIDKNDIYALLGMGNVYFKSLRTAKPNPDEKEQERIEKHLDYALLFFEKTLKLDNS 673

Query: 150 -CPGAIRLGIGLCRYKLGQLGKARQAFQRALQL------DPENVEALVALAVMDLQANEA 202
               A+  G  LC     + GKA  +  R + +       PE    L  LA++  Q ++A
Sbjct: 674 NMYAALNSGCVLCENGYTEEGKALISRVREICVGDDMKDTPETYINLGHLAMIQKQFSQA 733

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
             +     K  R F       M L YLA   F   +H   E+       +     T    
Sbjct: 734 EKLYSTCSK--RFFN--DENPMVLAYLAKSLFDNNKH---EESLNILKKIQEQDATNLTI 786

Query: 263 YYNLARSYHSK 273
            YN+A +++ K
Sbjct: 787 KYNIALAFYEK 797


>gi|412988907|emb|CCO15498.1| SH2 domain binding protein [Bathycoccus prasinos]
          Length = 1225

 Score =  332 bits (850), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 270/999 (27%), Positives = 463/999 (46%), Gaps = 122/999 (12%)

Query: 3    REYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIE------- 55
            + Y  +   E F +I+  G SPEI++YY +  Y R  +L     +   +           
Sbjct: 63   KAYLAEDNEEAFLEIVGSGCSPEIEQYYPNDVYGRAKLLCCSAAHQVNVAARLRLGGKGK 122

Query: 56   ------TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIV 109
                  T  + ++EH   A +   +A  I   E    + +  LL  KGE   A       
Sbjct: 123  GGQANTTNAQRRQEHLTRADKLLQRAFAIASKEQVVAITRAHLLFEKGEKPTAEKILDSA 182

Query: 110  L---EADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
            L   +  RDNV A+L +A   F   R YS+SL +YKRAL++HP  P  +RLG+  C + +
Sbjct: 183  LAMKDGGRDNVAAMLWKARRLFVEERKYSESLTWYKRALKMHPQAPAEVRLGLAACHFAM 242

Query: 166  GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-------IRKGMEKMQRAFEI 218
                 AR AF RA  +D E V+A V LA  DL   E  G       + + +E + +AFEI
Sbjct: 243  KDFASARLAFARAADMDNECVDAYVGLAKCDLAEFEEVGTKEHAEAVERSVENLYKAFEI 302

Query: 219  YPYCAMALNYLANHFFF------TGQHFL--VEQLTETALAVTNHGPT-KSHSYYNLARS 269
             P   +    LA H+ +      T    L  +E LT+  +         ++ + +  A++
Sbjct: 303  DPTNPLVSLTLAEHYLYSSASAGTSSEELKNIETLTDGIIKNEKEASVFRAEALFIRAQA 362

Query: 270  YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
            +H+ G+   A  YY +++ +++K   F  P++G+ Q+ LK  D   A  + E+    YP+
Sbjct: 363  FHASGNLPSALTYYQSAI-DLDK--NFAAPHFGVAQIFLKQNDAFEAKKHCERAQSAYPE 419

Query: 330  NCETLKALGHIYVQLGQIEKAQELLR-KAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
            +    +A G +   +G  ++A E+      K D  D Q  ++LGELL  SD   AL+A++
Sbjct: 420  SLFVKRAFGKLCAAVGDSKRAVEMYDFDPYKRDGTDFQTMLELGELLERSDATRALEAYE 479

Query: 389  TARTLLKKAGEEVPIEVLNNIGV-----IHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 443
             A  + KK G+ +    LNN+GV     +    G  +  +Q+ KD          +    
Sbjct: 480  KAMNIAKKVGDTIDAVTLNNVGVLRARLVTSTTGAEKEDNQNNKD--------KNISKND 531

Query: 444  KTYVIDASASMLQFKD-MQLFHR----------FENDGNHVEL----PWNKVTVLFNLAR 488
             T V +  AS+   +D + +F+            + D   ++L    P     V FNLA+
Sbjct: 532  DTDVKNKEASLHSLEDALDIFYPEAAPNVASKLQKGDKKAIDLAKKLPAPARAVAFNLAK 591

Query: 489  LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA-IAKARNNLQLSIELVNEALKVNGKY 547
              E   +   +S L+  +     D +D  LR A  + +   + + ++  + EALK N   
Sbjct: 592  AEEIFGEEKKSSSLFETLNKSNPDDIDVALRKAIELCERFGDFEGALTKITEALKRNPGN 651

Query: 548  PNALSMLGDLELKNDDWVKAKETFR-------------------------AASDATDGK- 581
             +A++  G + +K   W +A++ F                           AS   D K 
Sbjct: 652  ADAVATSGWVLMKQRRWKEAEQQFEELRELPSDLAEEDKFHLRNAAGGGDEASKKDDDKT 711

Query: 582  ---DSYATLSLGNWNYFAALR---NEKRAPKL---EATHLEKAKELYTRVIVQHTSNLYA 632
               D YA +S GN  Y++AL+   +++  PK+   E  H ++A+ LY + +V+  +N +A
Sbjct: 712  LKLDEYALVSAGNAAYYSALKEGLHKRSDPKIRQREDDHYKRAESLYKKALVKEPTNAFA 771

Query: 633  ANGAGVVLAEKGQFDVSKDLFTQVQE--------------AASGSVFVQM-PDVWINLAH 677
            ANG  ++LAE+G+ D +K +FT VQE              +A+  +  ++  DV +NL H
Sbjct: 772  ANGLAILLAERGRMDDAKAVFTLVQESLEIENAGIAGTSASAATKILSELQADVLVNLGH 831

Query: 678  VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS 737
            +  A+  +A ++K Y    ++FY+ T  +I+L+ AR HYE +     KK+L  A+H+AP 
Sbjct: 832  IALAKAQYAASLKFYDRAQQEFYHGTSHEIMLFQARAHYENQNLLQAKKTLQEALHIAPM 891

Query: 738  NYTLRFDAGVAMQKFSASTLQKTRRTADE------VRSTVAELENAVRVFSHLSAASNLH 791
            N+ +RF+    +Q+ +  +L  T ++         V   +  ++ A+ +F+ L    N  
Sbjct: 892  NHRVRFNLAYVVQELAQRSLNDTLKSVSSEGRVARVEKALENIQVALHMFTQLKELGNQP 951

Query: 792  LHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQ 851
              GFD K+   H  +CK  L+ +K H E A  EE++  + ++A  +A  A E  R  E+ 
Sbjct: 952  KFGFDTKRTTVHANFCKQALEKSKPHLEKAHAEEEKLMKSKKAQMEARKALEEGRAKEKA 1011

Query: 852  KKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASK 890
             K L E++K  + +    + E  F+  + +W +   A +
Sbjct: 1012 AKALEEEQKKRELEAIAAESERRFKETRMRWEARAQARR 1050


>gi|392896106|ref|NP_001255000.1| Protein B0464.2, isoform a [Caenorhabditis elegans]
 gi|6648105|sp|Q03560.3|YKD1_CAEEL RecName: Full=TPR repeat-containing protein B0464.2
 gi|3873800|emb|CAA79544.1| Protein B0464.2, isoform a [Caenorhabditis elegans]
          Length = 1150

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 244/888 (27%), Positives = 452/888 (50%), Gaps = 54/888 (6%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY++Q +V+ F  ILE   S    EY   V+ +++  L+ L  Y+   G  E  + +K +
Sbjct: 60  EYYRQDRVDLFMMILESAGSRAGLEYEG-VKQDQMRALDILAAYWMTQGYREKAKDKKSD 118

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVP 118
            F  AT  +N A +I M+E S    +    L     +  + E A   F  V++ +  NV 
Sbjct: 119 FFSKATVLFNTADKIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTNPKNVL 178

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
            L+G+A + FN+  Y  ++ ++++A++        +R+GIG C  K+G + KA+ AF+RA
Sbjct: 179 PLIGKAVIAFNKKDYKTAIYYFRKAIRQCRHTIADLRVGIGHCFAKMGMMDKAKTAFERA 238

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           ++++P NV A+  L ++ L   +   ++  +    R++ +     +AL +LANHFFF  +
Sbjct: 239 MEIEPYNVSAMCGLGIILLNTYDHDSLKHAVSLFGRSYNLQTDHPVALIHLANHFFFKKE 298

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
                 L   A    +    K+ ++Y + R  H++G ++ A  YY  + +  N  H    
Sbjct: 299 IERAWTLAWHAATYNDCDSIKAEAFYQMGRCRHAQGQFDGAYKYYYQARQANNGEH--TL 356

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY--VQLGQI-------EK 349
            +YGLGQ+ +   +   A+  F+ V +  P+N +T+K LG +Y  VQL          +K
Sbjct: 357 AHYGLGQMYIHRNEIEEAIKCFDTVHKRLPNNTDTMKILGSLYAHVQLNDPAQTAEARQK 416

Query: 350 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVLNN 408
            +++L K   ++  D +A IDL +LL ++D   +L+ ++ A  LL       P  E+LNN
Sbjct: 417 GRDVLGKYLAVENDDYEACIDLAQLLEATDPKRSLELYENAIDLLVTNESIQPQPEMLNN 476

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
           +G ++    ++E A   FK A         L+ +  T   D  + +L+        R   
Sbjct: 477 VGALYMSMKQYEKAEHHFKRA------KERLEEQLNT---DEGSLLLE-------RRSAP 520

Query: 469 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
           + +H+      +T+ +NLA  LE +  TV A  +Y+ I+ +   Y+D YLRL  I + R+
Sbjct: 521 EKSHL------LTIRYNLALCLEHLCRTVEAEQMYKDIVKECPGYIDGYLRLGCITRDRH 574

Query: 529 NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSYA 585
            +  S   + + ++ +   P   +++G+L    ++W+ A++ F    S   + K  D Y+
Sbjct: 575 QVYESSLWLKQGVQFDQASPIVWTLIGNLHFAKNEWMPAQKKFEFILSKIFNNKIPDPYS 634

Query: 586 TLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ 645
            ++LGN  +F  L N  R  + E  ++++A ++Y + +     N+YAANG G VLA K  
Sbjct: 635 LVALGN-VWFEQLLNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGCVLAYKRN 693

Query: 646 FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 705
           ++ ++D+F+QV+E+ S     +  DVW+N+AHV   +  +  A++MY + ++KF    D+
Sbjct: 694 WNDARDVFSQVRESTS-----EFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKFRKENDS 748

Query: 706 QILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTAD 765
            +  YLA+ +Y A    + K++L  A+     N  L+F+  + ++K +   L+  + T++
Sbjct: 749 TLQHYLAKAYYRANMLNEAKEALECAMLDQLDNTQLKFNYAIVLKKSAKEVLRGHKMTSE 808

Query: 766 EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINT----HVEYCKHLLDAAKIHREAA 821
           +V + + +L+ A ++F ++S   +        +   T      + CK LL  AK    AA
Sbjct: 809 QVTAAIDDLKFADKIFQYISKNDDRQSSHTGMRISRTICAEEAKNCKDLLTQAKHKLAAA 868

Query: 822 EREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR 869
           + ++++ R+  E   +  +A + +   E + K   EK+KLED  K LR
Sbjct: 869 QTQDEEERRLMEKQEKEKIALQNKMIEEARAKEEAEKQKLED-MKNLR 915


>gi|392896102|ref|NP_001254998.1| Protein B0464.2, isoform c [Caenorhabditis elegans]
 gi|224492384|emb|CAX51622.1| Protein B0464.2, isoform c [Caenorhabditis elegans]
          Length = 1201

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 244/888 (27%), Positives = 452/888 (50%), Gaps = 54/888 (6%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY++Q +V+ F  ILE   S    EY   V+ +++  L+ L  Y+   G  E  + +K +
Sbjct: 111 EYYRQDRVDLFMMILESAGSRAGLEYEG-VKQDQMRALDILAAYWMTQGYREKAKDKKSD 169

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVP 118
            F  AT  +N A +I M+E S    +    L     +  + E A   F  V++ +  NV 
Sbjct: 170 FFSKATVLFNTADKIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTNPKNVL 229

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
            L+G+A + FN+  Y  ++ ++++A++        +R+GIG C  K+G + KA+ AF+RA
Sbjct: 230 PLIGKAVIAFNKKDYKTAIYYFRKAIRQCRHTIADLRVGIGHCFAKMGMMDKAKTAFERA 289

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           ++++P NV A+  L ++ L   +   ++  +    R++ +     +AL +LANHFFF  +
Sbjct: 290 MEIEPYNVSAMCGLGIILLNTYDHDSLKHAVSLFGRSYNLQTDHPVALIHLANHFFFKKE 349

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
                 L   A    +    K+ ++Y + R  H++G ++ A  YY  + +  N  H    
Sbjct: 350 IERAWTLAWHAATYNDCDSIKAEAFYQMGRCRHAQGQFDGAYKYYYQARQANNGEH--TL 407

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY--VQLGQI-------EK 349
            +YGLGQ+ +   +   A+  F+ V +  P+N +T+K LG +Y  VQL          +K
Sbjct: 408 AHYGLGQMYIHRNEIEEAIKCFDTVHKRLPNNTDTMKILGSLYAHVQLNDPAQTAEARQK 467

Query: 350 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVLNN 408
            +++L K   ++  D +A IDL +LL ++D   +L+ ++ A  LL       P  E+LNN
Sbjct: 468 GRDVLGKYLAVENDDYEACIDLAQLLEATDPKRSLELYENAIDLLVTNESIQPQPEMLNN 527

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
           +G ++    ++E A   FK A         L+ +  T   D  + +L+        R   
Sbjct: 528 VGALYMSMKQYEKAEHHFKRA------KERLEEQLNT---DEGSLLLE-------RRSAP 571

Query: 469 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
           + +H+      +T+ +NLA  LE +  TV A  +Y+ I+ +   Y+D YLRL  I + R+
Sbjct: 572 EKSHL------LTIRYNLALCLEHLCRTVEAEQMYKDIVKECPGYIDGYLRLGCITRDRH 625

Query: 529 NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSYA 585
            +  S   + + ++ +   P   +++G+L    ++W+ A++ F    S   + K  D Y+
Sbjct: 626 QVYESSLWLKQGVQFDQASPIVWTLIGNLHFAKNEWMPAQKKFEFILSKIFNNKIPDPYS 685

Query: 586 TLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ 645
            ++LGN  +F  L N  R  + E  ++++A ++Y + +     N+YAANG G VLA K  
Sbjct: 686 LVALGN-VWFEQLLNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGCVLAYKRN 744

Query: 646 FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 705
           ++ ++D+F+QV+E+ S     +  DVW+N+AHV   +  +  A++MY + ++KF    D+
Sbjct: 745 WNDARDVFSQVRESTS-----EFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKFRKENDS 799

Query: 706 QILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTAD 765
            +  YLA+ +Y A    + K++L  A+     N  L+F+  + ++K +   L+  + T++
Sbjct: 800 TLQHYLAKAYYRANMLNEAKEALECAMLDQLDNTQLKFNYAIVLKKSAKEVLRGHKMTSE 859

Query: 766 EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINT----HVEYCKHLLDAAKIHREAA 821
           +V + + +L+ A ++F ++S   +        +   T      + CK LL  AK    AA
Sbjct: 860 QVTAAIDDLKFADKIFQYISKNDDRQSSHTGMRISRTICAEEAKNCKDLLTQAKHKLAAA 919

Query: 822 EREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR 869
           + ++++ R+  E   +  +A + +   E + K   EK+KLED  K LR
Sbjct: 920 QTQDEEERRLMEKQEKEKIALQNKMIEEARAKEEAEKQKLED-MKNLR 966


>gi|255081975|ref|XP_002508206.1| PAF1 complex protein [Micromonas sp. RCC299]
 gi|226523482|gb|ACO69464.1| PAF1 complex protein [Micromonas sp. RCC299]
          Length = 1262

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 272/978 (27%), Positives = 437/978 (44%), Gaps = 179/978 (18%)

Query: 1    MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
            + + Y +QGK E F  IL   +  EI+EYY D +YER  IL  L  YY  + K E+ Q  
Sbjct: 56   IAKAYLQQGKEENFHAILSNATEDEIEEYYPDSQYERSCILCTLASYYVNIAKGESDQIN 115

Query: 61   KEEHFILATQYYNKASRIDMH------EPSTWVGKGQLLLAKGEVEQASSAFKIVLEA-- 112
            + E    A +  +KA  +  H      E    V +  L  AKG    A  A K++ EA  
Sbjct: 116  RVELLTKAEKLIDKADLLWQHKRREDREQMPCVSRAHLEFAKG---NAIDAEKLLDEARG 172

Query: 113  ----DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
                 +DN+  +L +A + F R + +D+L++YKRAL++HP     +RLGIG C  +LG  
Sbjct: 173  LKDGGKDNIGPMLWKALLLFKRDQVADALQWYKRALRMHPGADAGVRLGIGACNLRLGNF 232

Query: 169  GKARQAFQRALQLDPENVEALVALAVMDLQ------------------------------ 198
              AR AFQRAL L+PEN +AL+ LA  +L                               
Sbjct: 233  EHARLAFQRALDLEPENPDALLGLAQCELNEFTPVPESLLHGGDEDTDPASVEEKMEAAA 292

Query: 199  ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL--AVTNHG 256
                A +++G+E ++RAF   P+       LA HF        V+ LT+  +    TN  
Sbjct: 293  ETYTAAVQRGLELLRRAFNADPHHPAVNVALAQHFLIKKDGASVDHLTDKLVRGTSTNEL 352

Query: 257  PT---KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
             T   ++ + Y  AR +H  G  ++A   Y A+V+       F    +GL QV L  GD 
Sbjct: 353  ATPRLRAEAAYVRARLHHQDGKLDRAEAMYTAAVQ---MDESFAAAAFGLAQVYLAKGDH 409

Query: 314  RSALTNFEKVLEIYPDNCETLKALGHI---------------YVQLGQI-------EKAQ 351
            +S++   E+    YPD+   LK  GH+                V +G         ++  
Sbjct: 410  KSSMLYAERAYAAYPDSVPVLKLYGHLRRKQDAAAAAAGGAGLVSVGTFGAGAGRDKETA 469

Query: 352  ELLRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLL-----KKAGEEVPIEV 405
             +L+K  + DP D +A ++LG+ LL S D   AL A++ A  +         G + P  +
Sbjct: 470  RILKKVVEADPADLEARLELGDALLASGDYIGALGAYEMAVKIFGDRARNGKGPDAPAAL 529

Query: 406  LNNIGVIHFEKGE-FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 464
            LNN  V+    G+ ++ A   F  AL                     AS  +    +   
Sbjct: 530  LNNCAVLCAMTGKNYDKAKSLFLRAL--------------------EASAAEEGGKKTGE 569

Query: 465  RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
            + +      +   +   + FNLA L E       A+  Y  +L   +   +  LR AA+A
Sbjct: 570  QLDAQNERKKAAKSAQPIAFNLAHLDEDFGYVKEANDRYGDLLDANEGMTECLLRRAAMA 629

Query: 525  KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR---------AAS 575
              + +   ++EL  EA +      +A + +G L +K + + +A+E F+         +A 
Sbjct: 630  ARQEDFDKAMELAKEATERRPDDVDAAAYVGHLLMKQEKYKEAQEQFKRLREMPKKLSAE 689

Query: 576  D------------ATDGKDSYATLSLGNWNYFAALRNE------KRAPK------LEATH 611
            D             T   D YA +S  N  Y+ A++ +      K  P+      LE  H
Sbjct: 690  DAARRAAAGKTDPVTHTSDEYALISSANAAYYQAVKAQAGAKLVKSGPEREKWRNLEKEH 749

Query: 612  LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE------------- 658
            L++A+  YT+ + +  SNLYAANG G++LAEKG+ D +K  F  V E             
Sbjct: 750  LKQAELYYTKALQKSGSNLYAANGLGILLAEKGKIDEAKRTFQMVAEGLMSLGGGDHSKD 809

Query: 659  -------AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYL 711
                   A +    +  PD+WIN  H+  A+GN+  A + Y+   ++F++  D ++ LY 
Sbjct: 810  DGTEDSDANANKDMLTSPDIWINQGHIQMAKGNYVAAARNYEQAQQRFFFGMDPRVALYQ 869

Query: 712  ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTAD------ 765
            AR HYEA   ++ K +L RA+H+AP ++ LRF+     Q+ +  TL +T + A+      
Sbjct: 870  ARNHYEANNMEEAKVTLKRALHVAPWDHRLRFNLAYVYQEHAHRTLNRTLKGAEKGKQQG 929

Query: 766  -------EVRSTVAELENAVRVFSHLSAA-----------SNLHLHGFDEKKINTHVEYC 807
                   +V + + + + A+++F  + A            S     G D+K++  H+++C
Sbjct: 930  EGEGRLAQVLNAIEDFKLALQLFQQIQAVLQADKQKEGKKSLAQEIGIDKKRLGMHIQFC 989

Query: 808  KHLLDAAKIHREAAEREE 825
               L  ++ H EAA+ EE
Sbjct: 990  NKALTDSQPHLEAAKAEE 1007


>gi|308501437|ref|XP_003112903.1| hypothetical protein CRE_25581 [Caenorhabditis remanei]
 gi|308265204|gb|EFP09157.1| hypothetical protein CRE_25581 [Caenorhabditis remanei]
          Length = 1331

 Score =  328 bits (842), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 224/800 (28%), Positives = 409/800 (51%), Gaps = 49/800 (6%)

Query: 4    EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
            EYF+Q  V+ F  ILE   +    EY   V+ +++  L+ L  Y+   G  E  + +K++
Sbjct: 241  EYFRQNLVQPFMDILEAAGTRAGLEYQG-VKQDQMRALDILAAYWMTEGYKEKAKDKKQD 299

Query: 64   HFILATQYYNKASRIDMHEPSTWVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVP 118
             F  AT  +N A +I M+E S    +    L     +  + E A   F  V++    NV 
Sbjct: 300  LFSKATVLFNTADKIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTYPQNVL 359

Query: 119  ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
             L+G+A + FN+  Y  ++ ++++A++        +R+GIG C  K+G + KAR AF+RA
Sbjct: 360  PLIGKAVISFNKKDYKTAVYYFRKAIRQRHHSIADLRVGIGYCYAKMGLMDKARVAFERA 419

Query: 179  LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            L ++  NV A+  L ++ L   ++  + K ++   +++ +     +AL +LANHFFF GQ
Sbjct: 420  LDIEENNVSAMCGLGIILLNTADSDDLVKAVKLFGKSYNLQADHPVALVHLANHFFFKGQ 479

Query: 239  HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
                  L   A         ++ +Y+   R  H++G+Y+ A  +Y  + +  N  H    
Sbjct: 480  IDRAFHLASHAAQHNECDSIRAEAYFQAGRCRHAQGNYDGAYKFYYQARQANNGEH--TL 537

Query: 299  PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY--VQLGQI-------EK 349
             +YGLGQ+ +   +   A+  FE V +  P N ET+K LG +Y  VQL          +K
Sbjct: 538  AHYGLGQMFIHRNEIEDAIKCFETVHQRLPQNMETMKILGSLYAHVQLNDPVKTNQARQK 597

Query: 350  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK-AGEEVPIEVLNN 408
             +++L K   I+  D +  IDL +LL S+D   +L+ ++ +  LL++  G +   E+LNN
Sbjct: 598  GRDVLTKYLSIESNDYEVCIDLAQLLESTDPKKSLELYEKSIQLLEEFEGIQPQPEMLNN 657

Query: 409  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
            +G ++    ++E A   FK A          D   +    +  A +L         R   
Sbjct: 658  VGALYMSMKQYEKAEHHFKRA---------RDRLEEQLTSEEGAQLLT-------RRSAP 701

Query: 469  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
            + +H+      +T+ +NLAR LE +  T  A  +Y+ I+ +   Y+D YLRL  I + R+
Sbjct: 702  EKSHL------LTIRYNLARCLEHLCRTAEAEQMYKDIVHECPGYIDGYLRLGCITRDRH 755

Query: 529  NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSYA 585
             +  S   + + ++ +   P   +++G+L    ++W+ +++ F    S   + K  D Y+
Sbjct: 756  QVYESSLWMKQGVQFDQSSPIVWTLIGNLHFAKNEWMPSQKKFEFILSKIFNNKTPDPYS 815

Query: 586  TLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ 645
             ++LGN  +F  L N  R  + E  ++++A ++Y + +     N++AANG G VLA K  
Sbjct: 816  LVALGNV-WFEQLLNPSRKKEDEKKYIDRALQMYQKALKLEPKNMHAANGIGCVLAYKKN 874

Query: 646  FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 705
            ++ ++D+F+QV+E+ S     +  DVW+N+AHV   +  +  A++MY + ++KF    D 
Sbjct: 875  WNDARDVFSQVRESTS-----EFYDVWLNIAHVCMEREQWMTAVQMYSSAMKKFRKENDP 929

Query: 706  QILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTAD 765
             +L YLA+ +Y A    + K++L +A+     N  L+F+  + ++K +   L+  + T+ 
Sbjct: 930  VLLHYLAKAYYRANMLVEAKEALEKAMFDQLDNTQLKFNYAIVLKKTAKDILRGHKITSA 989

Query: 766  EVRSTVAELENAVRVFSHLS 785
            +V S +  L  A ++F ++S
Sbjct: 990  QVESAIYNLTFAEKIFQYIS 1009


>gi|303276779|ref|XP_003057683.1| PAF1 complex protein Ctr9 [Micromonas pusilla CCMP1545]
 gi|226460340|gb|EEH57634.1| PAF1 complex protein Ctr9 [Micromonas pusilla CCMP1545]
          Length = 782

 Score =  324 bits (831), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 242/758 (31%), Positives = 383/758 (50%), Gaps = 88/758 (11%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           + + Y  +GK EQFR ILEE + PEI+ YY D + ER AIL  L  Y+  +GK E  +  
Sbjct: 45  VAKAYLSKGKEEQFRNILEEATQPEIETYYPDSKCERTAILCTLASYHVNMGKAENDKIR 104

Query: 61  KEEHFILATQYYNKASRI----DMHEP--STWVGKGQLLLAKGEV---EQASSAFKIVLE 111
           +++HF  A      A  I    +  EP  +  VG+  L LAKG +   E+   A + + +
Sbjct: 105 RDDHFYKADGLLRAAELIKQKANGEEPEQAPVVGRAHLELAKGNLAAAEKLVDAARSLKD 164

Query: 112 ADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH-PSCPGAIRLGIGLCRYKLGQLGK 170
               NV  LL +A + ++RG+++++L++Y+RAL+    + P  +RLGIG C+Y+LG    
Sbjct: 165 GGAGNVLPLLMKARLLYDRGQFAEALQWYRRALRSQGAAAPAGVRLGIGACQYQLGNFEG 224

Query: 171 ARQAFQRALQLDPENVEALVALAVM-DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
           AR AF+R +QL+P NV+ALV LA + D + N  A +++G+E ++RAF + P+   A   L
Sbjct: 225 ARLAFERTIQLEPTNVDALVGLASLADAKTNYVAAVKRGLELLERAFTLDPHHPGAQVEL 284

Query: 230 ANHFFFTGQHFL--VEQLTETAL-----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
           A HF + G   L  +EQLTET +     A+ +    ++ +    A+++HS+G+ ++A   
Sbjct: 285 AKHFLYAGDDNLQAIEQLTETLIRGGADAIGSTPRLRAQAAMTRAKAHHSRGELQRAQGL 344

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
           Y A+ +     HE   P +GL QV L  GD ++ALT  E+    +P++ E  +  GH   
Sbjct: 345 YQAAAQMDETFHE---PNFGLAQVALTRGDNKAALTYAERAYAAFPNSVEVQRVYGHCRR 401

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEE- 400
                        KA + DP D  A I+ G+ LL + +  AAL A++ A  +L   G++ 
Sbjct: 402 IADDAAAMNGGGGKAVEADPYDYDAQIEHGDALLAAREYEAALAAYEGAVEILNNGGKKA 461

Query: 401 -----VPIEVLNNIGVIH-FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
                +   +LNN+GV+    KG   + H+               D++        +A+ 
Sbjct: 462 DGTSTISSSLLNNVGVLKAMTKG--AAGHE---------------DTRAVFLAALEAAAK 504

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
            +    +     +      +    ++ V FNLARL E+  D   A+  Y  +L    +  
Sbjct: 505 EEGGKGEKGEALDEPAERRKATGARLQVAFNLARLSEEKGDIEDATARYDDLLVASPEMT 564

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR-- 572
           +  LR AA+A  R N   + +   +AL+     P+A++ +G + +K   W +A+  F+  
Sbjct: 565 ECLLRKAAMAAKRENFAAAEQFARKALETKPDDPDAMASVGHVLMKQSRWSEAQAQFKAL 624

Query: 573 -----------AASDATDGKDS---------YATLSLGNWNYFAALR-----NEKRA-PK 606
                      AA  A  GKD          YA LSL N  Y+ A++     N KR  PK
Sbjct: 625 RNLPKKLTPTQAALSAAAGKDPNAATHQHDEYAMLSLANAAYYQAVKLQSSVNHKRGDPK 684

Query: 607 L---EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE---AA 660
           +   E  HL+ A  LYT+ + ++ S++YAANG G++LAEKG+ D +K  F  V E   AA
Sbjct: 685 VREAEQAHLDYATTLYTKALQKNCSDMYAANGLGILLAEKGRIDEAKATFQMVAEGITAA 744

Query: 661 SG--------SVFVQMPDVWINLAHVYFAQGNFALAMK 690
           +G        S  +  PD+WIN  HV  A+GN+  A K
Sbjct: 745 TGKGAEGAADSSLMSSPDIWINQGHVQMAKGNYVAAAK 782


>gi|384253071|gb|EIE26546.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
          Length = 751

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 240/815 (29%), Positives = 397/815 (48%), Gaps = 108/815 (13%)

Query: 11  VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQ 70
           ++Q+  IL EG+S E+ +Y+   ++ER+ I  AL  YYT  G+ +  +  + +HF  A Q
Sbjct: 1   MKQYLYILNEGTSKEVADYFQGAKFERLQIFCALAAYYTAEGRTQRDRNARADHFAKAAQ 60

Query: 71  YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD---RDNVPALLGQACVE 127
               A +ID  +   ++G GQL +A+G+++ A   F     A    R N+   L  A V 
Sbjct: 61  LLGTARQIDYDDQLPFLGLGQLEMARGDMQSAKVHFTSAAAAQCNGRVNIAGTLALANVH 120

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           F +G+YS +L  Y+RAL+ HP  P  +RLG+  C ++LGQ   A+ A++R L L P   E
Sbjct: 121 FQQGQYSPALGLYRRALKEHPGAPPEVRLGLAACLFRLGQCKLAKAAYERTLDLLPSCGE 180

Query: 188 ALVALAVMDLQANEA-AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
           AL+ LAV+   + +   G R+G++ + RA++  P     L+ LA      G      +L 
Sbjct: 181 ALLGLAVIAFNSRDTEKGFREGLDLLCRAYDADPGQPGVLSLLARFCIQRGDWQRARELA 240

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
             A A +     ++ +    AR++H++G+Y  A   Y  + K   K      P YGL Q+
Sbjct: 241 TAAHAASESAGARALALTLQARAHHAEGNYNLAYRSYQQASKLDPK---LPLPLYGLAQI 297

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
            ++  +  +A++  E  L           ALG         + A +  R A + +     
Sbjct: 298 MVRQREQTNAISLLESAL-----------ALG---------QAAIDHFRDATEANSTSGS 337

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
            +  LGELL   D        +      K         +LNN  V+H   GE  +A    
Sbjct: 338 VWEMLGELLAPIDPPGPPLPLRLDPLPAK---------LLNNAAVLHMRGGEATAALDLM 388

Query: 427 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 486
           + AL           +  T+ +   A+                                 
Sbjct: 389 QKAL-----------QASTHSLPPPAA--------------------------------- 404

Query: 487 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 546
                   DT AA+  YR +L  +  Y D +LRLA IAK R +L  +++L  +AL+    
Sbjct: 405 -------GDTQAAARSYRAMLDAFPAYTDCHLRLACIAKHRGDLAGALKLTQKALEAKPG 457

Query: 547 YPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLSLGNWNYFAALRNEKRAP 605
            P+AL+M G L L+  D+ +A++ F+A       K D+Y  L L   N FA+  + +R  
Sbjct: 458 LPDALAMQGWLHLEARDFKRAEDAFQALIKEPSAKNDAYGWLGLACLN-FASAPSHRRLK 516

Query: 606 KLEATHLEKAKELYTR-------VIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
            ++     KA++LY R       V+ ++ +N+YAANG   VLAE+G  +++ ++ TQVQE
Sbjct: 517 VID-----KAQKLYGRAMSFFKHVLERNHANVYAANGIAAVLAEQGDIELAHNILTQVQE 571

Query: 659 AASGS-VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           A + S  F++MPD  IN+ +++ A G   LA+++Y + LRK+++ + A + LYLAR +Y+
Sbjct: 572 AVAASEGFLRMPDAPINMGNLFLALGKPKLAIQVYNSVLRKYFHGSHATLQLYLARAYYD 631

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTR-----RTADEVRSTVA 772
           A + +  +  LL+A+H+APS++ L F+  + MQ ++   L++TR        DE  + V 
Sbjct: 632 ATELKIARTVLLKAVHVAPSDHRLLFNIALTMQNYAVCLLKETRVEGDLSKLDEFDAAVM 691

Query: 773 ELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYC 807
           +L  A R F  L+   + H  G D KK+  H+++C
Sbjct: 692 DLLQAHRFFEQLNNLGH-HKTGIDPKKLREHIDFC 725


>gi|344280887|ref|XP_003412213.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Loxodonta africana]
          Length = 1079

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 200/550 (36%), Positives = 304/550 (55%), Gaps = 47/550 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALE 226

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   + 
Sbjct: 227 LNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYS 286

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V+ L   A   T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 287 KVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 345 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 404

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 405 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 464

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G    A + F         L  LD                        R + +  H E  
Sbjct: 465 GNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHY 491

Query: 477 WNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +N ++V   +NLARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + 
Sbjct: 492 YNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEAS 551

Query: 535 ELVNEALKVN 544
           +   EAL++N
Sbjct: 552 DWFKEALQIN 561



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 163/649 (25%), Positives = 291/649 (44%), Gaps = 99/649 (15%)

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC--ETLKALGHIYVQLGQI 347
           +N+    I    G   +     D+R AL  ++K L   P  C  E    +GH +V+L ++
Sbjct: 156 LNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRTNP-GCPAEVRLGMGHCFVKLNKL 214

Query: 348 EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--V 405
           EKA+    +A +++ +   A + L  L +++      D+ K    LL +A    P    V
Sbjct: 215 EKARLAFSRALELNSKCVGALVGLAVLELNNKEA---DSIKNGVQLLSRAYTIDPSNPMV 271

Query: 406 LNNIGVIHFEKGEFES----AHQSFKDALGDGIWLTLLDSKTKTYVID------------ 449
           LN++    F K ++      A  +F +   + +         +++ +             
Sbjct: 272 LNHLANHFFFKKDYSKVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQ 331

Query: 450 -----ASASMLQFKDMQLFHRFENDGNHVELPWNKV-----------TVLFNLARLLEQI 493
                +S+ +L F  +   + +  D  +    + KV            +L +L    E  
Sbjct: 332 ATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQ 391

Query: 494 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY------ 547
                A    + +  +Y D V+A++ LA I + + ++Q ++     A ++  +       
Sbjct: 392 EKRDIAKGHLKKVTEQYPDDVEAWIELAQILE-QTDIQGALSAYGTATRILQEKVQADVP 450

Query: 548 PNALSMLGDLELKNDDWVKAKETF-----RAASDATDGKDSYATLSLGNWNYFAALRNEK 602
           P  L+ +G L  +  +  +AK+ F     RA ++A   +  Y  +S+      A L    
Sbjct: 451 PEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARL---- 506

Query: 603 RAPKLEA-THLEKAKELYTRVIVQHTS--NLYAANGAGV--------------------V 639
                EA     +A++LY  ++ +H +  + Y   GA                       
Sbjct: 507 ----YEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQ 562

Query: 640 LAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 699
           LA KG F  ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKF
Sbjct: 563 LAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKF 617

Query: 700 YYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK 759
           Y + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+ 
Sbjct: 618 YKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKD 677

Query: 760 TRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHRE 819
            +    EV + V ELE A R FS+LS   +     FD     T    C  LL  A+ H  
Sbjct: 678 EKSNLKEVLNAVKELELAHRYFSYLSKVGD--KMRFDLALAATEARQCSDLLSQAQYHVA 735

Query: 820 AAEREEQQNR-------QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
            A +++++ R       Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 736 RARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 784


>gi|301117386|ref|XP_002906421.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans T30-4]
 gi|262107770|gb|EEY65822.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans T30-4]
          Length = 1166

 Score =  316 bits (810), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 265/999 (26%), Positives = 460/999 (46%), Gaps = 151/999 (15%)

Query: 4    EYFKQGKVEQFRQILEEGSSPEIDEYYAD--VRYERIAILNALGVYYTYLGKIETKQREK 61
            EY+ QG V QF++IL   S P I+E Y D   R  RI    AL  +       E  ++++
Sbjct: 59   EYYNQGHVAQFQEILAVASEPGIEEIYKDNASRMCRIKFFIALASHAVNAMWNEEDEKKR 118

Query: 62   EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
            E     A  ++ +A R+D   P T VGK  + +AK E ++A    K VL +++ N+PA+L
Sbjct: 119  EAISQRAVGFFQRADRLDHQHPMTLVGKALMFMAKNEDDRADRFIKSVLISNKTNLPAIL 178

Query: 122  GQACVEFNRGRYSDSLEFYKRALQVHPSCPGA--IRLGIGLCRYKLGQLGKARQAFQRAL 179
            G+A + + + +Y D+ + Y  A+++HP  P A  +R+    C Y LG + KAR   +   
Sbjct: 179  GKALLLYRKKQYKDAKKLYLEAIKLHPRSPQAANMRMCFAYCCYHLGAVEKARAVMKYTA 238

Query: 180  QLDPENVEALVALAVMDL--QANE--AAGIR----KGMEKMQRAFEIYPYCAMALNYLAN 231
             LD  NV+A++A A+  L  Q+ E  A  IR    + M  +  A  I       LN+LAN
Sbjct: 239  SLDETNVDAVIASALWQLASQSREERAVSIRDESSRFMIMIHHAHAIDKTNPTVLNHLAN 298

Query: 232  HFF--FTGQHFLVEQLTETALAVTNH---------------------------------- 255
            H+F  +      V  +  +A+  T+                                   
Sbjct: 299  HYFSQWIPLPCTVSVVRGSAVVATSKDISSEVSPGQIICIGDKYVAYISRDEDAVSSSGL 358

Query: 256  ---GPTK--SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
               GP +  S +  N+AR  + K        ++   + EI     ++     +G+     
Sbjct: 359  KLDGPYRDESATATNIARKDYDKMFTLAGNAFHSTKIPEIRSESCYL-----MGRGCHAQ 413

Query: 311  GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK----------- 359
            G ++ A + +     ++P        L  +Y +  +  KA   L KA K           
Sbjct: 414  GKYKDAYSYYFNAGRLWPKFVLPWFGLAQMYYERKEFTKAASYLEKANKAYPENVEILSL 473

Query: 360  -----------------------IDPRDAQAFIDLGELLISS----DTGAALDAFKTART 392
                                   ++P + +A I   ELL  S    D   A+ ++  A  
Sbjct: 474  LGDVYGKLGKKDEAVVLLRRVVELEPGNVEALIGTAELLHGSPERKDQIIAISSYIAAEK 533

Query: 393  LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 452
            ++  A E VP+EV  N+GV+    G+   A   FK AL              T + D S+
Sbjct: 534  VMNNASERVPMEVYVNLGVLQQRVGKTSDAITCFKKAL--------------TQLGDDSS 579

Query: 453  SMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQD 512
            +  + K  +     E          N +T+L+N+ R+ E++ +   A  LY +IL  +  
Sbjct: 580  ANEESKSEEADALAEEASTPKPTEAN-ITILYNMGRVYEEMGNRDRAKKLYDVILEVFPR 638

Query: 513  YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            Y D  LRL  + + R     +I+  ++ L+V+     A  + G++ LK  +WV A++ + 
Sbjct: 639  YTDCLLRLGCMLRDRGQEAEAIKTFDKVLEVDPTCAEACLLQGNIYLKKREWVFAQKKYE 698

Query: 573  AASDATDGK-DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLY 631
                    K D YA LS+GN  + + L  + R  K    ++  ++  Y + +  H  N+Y
Sbjct: 699  KVMGMPGLKNDPYAFLSMGNI-FMSNLGEKNRYTK----NMSLSEVYYKKTLASHPHNIY 753

Query: 632  AANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 691
            AANG G+++AEKG F+++K +F+QV+EA+       MPD WINLAH++ A+  +  A+++
Sbjct: 754  AANGLGIMIAEKGNFELAKQIFSQVREASP-----DMPDAWINLAHIFVAEERYQEAIQL 808

Query: 692  YQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQK 751
            Y  CL K Y   D ++LLYLA+ +YE++ +  C  +L RA+H+ P++  L ++ G+A + 
Sbjct: 809  YTVCLTKCYQGQDLEVLLYLAKAYYESKDFPSCIATLSRALHMYPNDLRLWYNTGLAQED 868

Query: 752  FSASTLQK----TR----------RTADEVRSTVAELENAVRVFSHL-----------SA 786
            ++  TL +    TR          RT  +V+  + +L+ A R+F  L           ++
Sbjct: 869  YAVMTLGQETTVTRSGSGSAVPQLRTMADVQRAILDLKRAQRIFRFLLQQSEASASSSNS 928

Query: 787  ASNLHLHG--FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEA 844
                H +   FD++K++ H ++C   L  A  H E  ER++++ R+ +  A++  L E  
Sbjct: 929  EKKKHHNSLPFDKEKVSDHEKFCGDTLTKASYHLE-FERQKEEKRRLEIEAQRKLLREYE 987

Query: 845  RRKAEEQKKYLLEKRKLEDEQKRLR-QQEEHFQRVKEQW 882
             R A EQ++  +++       + +R +Q+E  +++ E W
Sbjct: 988  ERVAREQEEVRVKEEDTRRRHEDIRLKQDERLKKLHEGW 1026


>gi|326431022|gb|EGD76592.1| hypothetical protein PTSG_07709 [Salpingoeca sp. ATCC 50818]
          Length = 1102

 Score =  315 bits (807), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 252/866 (29%), Positives = 409/866 (47%), Gaps = 89/866 (10%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE---QASSAFKIVLEA-DRDNVPALLGQ 123
           ATQ  N+    D +    WV KG + L  G  E   +A + F +VL +  + ++PALLG+
Sbjct: 158 ATQLTNEVDIYDQNNEGNWVCKGYISLFVGTSEHLDRARTLFDLVLTSKSQTSIPALLGR 217

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           A ++F++  Y+D+L  Y+  L++ PSCP +IR+ +G+C  +L +  KAR AF+RAL LD 
Sbjct: 218 AAIDFHKDLYADALRRYRTVLRISPSCPASIRVAMGMCFARLERFDKARAAFERALALDE 277

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF--- 240
            NV ALV  A++ +   E   +R+ +E++ +A+++     M LN L NHFF   ++    
Sbjct: 278 NNVPALVGTAILLINQKERGAMREAVERLTKAYKLDRTNPMTLNLLGNHFFHRKEYSKAL 337

Query: 241 -LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIF 298
            LV  +  TAL        K+ +++++AR +H +G+ + A   YY A+    +     + 
Sbjct: 338 GLVTHVAGTAL----DRDIKAEAFHHMARIHHQQGNLDTALSHYYQAT----SLSPSLLP 389

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ-------IEKAQ 351
            +YGLGQ+ +     R A   FE V +  P N    K L  +YVQ  +       +EKA 
Sbjct: 390 AHYGLGQMYIHKKQLRRARDCFEIVYKHMPTNMAAAKILACMYVQEAETSRSATALEKAT 449

Query: 352 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV 411
            L  K  K  P D +A+++LG LLI S+   AL  F  A+T L+  G  +P E++NN+  
Sbjct: 450 ALFDKVLKQRPEDIEAWVELGMLLIRSNPKRALGVFGEAKTRLEALGSALPPELVNNMAC 509

Query: 412 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
           +H        A   F++AL  G+ L            D  A M +  D++ F        
Sbjct: 510 LHLLNTNHRHAKAMFEEALS-GLDLD----------PDEQADM-EEADIEFFK------- 550

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
                  KVTV +N ARLLE  ++  AA   Y  IL  + DY DA  RL  +A+ R  + 
Sbjct: 551 -----GAKVTVRYNRARLLETTYELDAAEEEYHAILQSHPDYADARFRLGVMAQRRGAIN 605

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLG 590
            +     + L++N     AL++LG+L ++      A+  F +         D Y+ +SLG
Sbjct: 606 EATIFFKDCLRLNE--VTALTLLGNLCIQKRQLQHAQRYFDKIIKLRKKEGDLYSLVSLG 663

Query: 591 NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 650
           N  +             +     +A++ +T+ +     N++A NG G V A +G    +K
Sbjct: 664 NIFF-------------QRVDFVRAQKYFTKALEASVENVFAVNGLGCVFAAQGNTAQAK 710

Query: 651 DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 710
           DLF Q++EA +      M  + +NLAH Y   G+ +  + +Y+ C RK    TDA I   
Sbjct: 711 DLFQQIREATTD--VEGMDQILLNLAHAYVDLGSLSEGIALYEYCQRKMGRRTDASIHAA 768

Query: 711 LARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRST 770
           LAR HY+   ++  +K  ++A HL P +    F+  +  Q+ + S L   R   D++   
Sbjct: 769 LARAHYKNRDYKLARKHFVKAKHLDPLDSRHDFNIALTQQQEARSILDSRRPLPDQLLEA 828

Query: 771 VAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQ 830
              L  A + F  L      H   +D K+       C  L   +K    AAE E  + ++
Sbjct: 829 ETLLGLARQCFRQLKRPR--HQVKYDFKRAEKEERLCVDLRHQSKQRSTAAESEASKLKK 886

Query: 831 RQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASK 890
           + E AR      + R   +E++             +RL + E   +    ++  S P   
Sbjct: 887 QAEVARLFQQQLQQREAEKEER------------LQRLAEAEARKREKIMEYEQSMP--- 931

Query: 891 RRERSENDDDEVGHSEKRRRKGGKRR 916
                 N  D +  +E ++R+G KRR
Sbjct: 932 ------NVGDIMERAEAKKREGRKRR 951


>gi|339244101|ref|XP_003377976.1| RNA polymerase-associated protein CTR9-like protein [Trichinella
           spiralis]
 gi|316973156|gb|EFV56779.1| RNA polymerase-associated protein CTR9-like protein [Trichinella
           spiralis]
          Length = 1189

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 265/959 (27%), Positives = 455/959 (47%), Gaps = 96/959 (10%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+K+G+   F  +LE   +   D Y  Y D   +++  L+ L  Y+   G  E  + E+
Sbjct: 54  EYYKRGRDSDFATLLEMSGT---DAYVNYPDYARDQMRALDLLAAYFVQKGTKERSKDER 110

Query: 62  EEHFILATQYYNKASRIDMHEPST----------WVGKGQLLLAKGE-VEQASSAFKIVL 110
            E    +T  Y  + +++M++              +G+  L     E ++QA + F  VL
Sbjct: 111 AEILAKSTVLYTTSDKVNMYDKVLEYLITEYKYHLLGRAYLCSQDWEKIDQADAQFNFVL 170

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
               ++  ALLG+A + F +  Y ++L +YK+ L+ +P+CP  +RL +G C  KLG L K
Sbjct: 171 NQTPNSTAALLGKAAIAFKKKDYKNALLYYKKTLKTNPNCPAEVRLAMGNCFVKLGHLAK 230

Query: 171 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
           AR AFQRAL+L+P  V AL  LA+++++   A  I+  + ++ RA+ I       LN LA
Sbjct: 231 ARLAFQRALELNPNCVGALSGLAILEMKDGTAESIKSAVHRLTRAYSIDKEDPTVLNQLA 290

Query: 231 NHFFFTGQHFLV--------------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           NHFFF     LV               QL   A   T +   ++ S + L R     G+Y
Sbjct: 291 NHFFFKRVLLLVVVQCRIGVFDRQYSHQLALYAFHKTENEALRAESCFQLGR-----GEY 345

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQ--VQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           E+A  YY  +  +   P   + P YGLGQ  +Q    D  +A+  FE V   +P++ ET 
Sbjct: 346 EQAFQYYYQA-NQFQSPASHL-PLYGLGQMYIQRSDNDKENAIQCFETVYARHPESQETC 403

Query: 335 KALGHIYVQLGQIE---KAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFK 388
           + L  +Y     +E   KA+ +  K  + +  D   +++   ++++   G    AL AF 
Sbjct: 404 RILASLYASSNNMERKAKARTMFAKLIEHNDDDVDTWVEYA-MILADCRGYEIQALKAFD 462

Query: 389 TARTL-LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 447
            A  L L+K   E+P E  NN+G +HF   ++  A   F+ AL             K   
Sbjct: 463 KAMKLYLEKPDIEIPAEFYNNVGAMHFRAAKYTEAASYFEKAL------------QKVSS 510

Query: 448 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 507
           I          D  L++            W  VT  +NLAR+ E +++   A  +Y+ IL
Sbjct: 511 IPT--------DHPLYNSL----------W--VTCSYNLARVKELLYELEEAEKMYKDIL 550

Query: 508 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKA 567
            ++  YV  YLRL  +++ R  +  +     EAL+ N   P+A +++G+L L   +W  A
Sbjct: 551 RRHPAYVHCYLRLGCMSRDRGQIYDASVWFKEALQFNPDDPDAWTLIGNLHLGKQEWGPA 610

Query: 568 KETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQH 626
           ++ F R     +   D Y+ ++LGN  +F +L++     + +  + ++A  LY + +  H
Sbjct: 611 QKKFERILKQPSTAHDPYSLVALGNV-WFLSLQSYNHEKEKQRKYEDRALSLYKQALRVH 669

Query: 627 TSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 686
             N+ AANG G VLA +G F  +K++F++V EA    V     D  +N+AH+Y    N+ 
Sbjct: 670 PENILAANGVGCVLAHRGYFQEAKEVFSRVCEATGDFV-----DALLNIAHIYVELRNYV 724

Query: 687 LAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAG 746
            A++ Y+ CL+KF  +    I   LA  +Y A +    K+ LL A   AP +    +   
Sbjct: 725 AAIQTYECCLKKFAIHGRLDIWQCLAVAYYRANRLPQSKRILLSARIFAPYDAMTLYSLS 784

Query: 747 VAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEY 806
             +++ +   ++  +    +V   V +LE A R F  L+  ++  +     +      + 
Sbjct: 785 FVLKRHAVHVMKDLKSGLKQVLDAVKDLEVAERQFLFLAKFTD--VSSSVRRGAAIEGQK 842

Query: 807 CKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQK 866
           C  +L  A+ H E A+R+E+   + +    +       +++ E++ K    KR LE+++ 
Sbjct: 843 CTDILSQAQHHVERAQRKEEAENELRRNLEEERRLLLEKQQEEQRLKEEERKRLLEEQEI 902

Query: 867 RLRQQEEHFQRV------KEQWRSSTPASKRRERSE--NDDDEVGHSEKRRRKGGKRRK 917
           R R   E  +++      +E+     P  ++R+  E  NDD ++G  E  R+   K+RK
Sbjct: 903 RRRDFIERTKKLLIMPTFEEEKPKRAPKGRKRKDEEFVNDDSDLGDWEPGRQSLPKKRK 961


>gi|428166303|gb|EKX35281.1| hypothetical protein GUITHDRAFT_79976, partial [Guillardia theta
           CCMP2712]
          Length = 750

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 216/728 (29%), Positives = 371/728 (50%), Gaps = 70/728 (9%)

Query: 5   YFKQGKVEQFRQILEEGSS---PEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 61
           Y++Q +V QF  ++E  +    P   +YY D ++ RIA+LN L  Y+  +      ++ K
Sbjct: 52  YYQQNRVPQFLMVMETSTGDEGPFYQDYYKDDKHGRIALLNCLAAYHVQMASRTKSRQTK 111

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE-------------QASSAFKI 108
           E+HF  AT+ + +A RID     T+VGKG + +AK  +              QA   F  
Sbjct: 112 EQHFQKATELFQQADRIDRGVALTFVGKGLIHIAKMSLPTRKGSDSSGDHLMQAGVMFDN 171

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
            +E DR  +PA LG+A V+FN+ +Y ++L+ YK+ L+++P+CP  +RLG+  C   L   
Sbjct: 172 AIECDRTCIPAWLGKASVQFNKRQYGEALKSYKQVLRLNPACPPEVRLGLAHCYAALKLD 231

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-------------IRKGMEKMQRA 215
             A +AF+R ++L P NVE LV LA++++  +  A              + K ++ ++RA
Sbjct: 232 DYALKAFERVVELSPNNVEGLVGLAIIEMNRDPPANLTEEQEGTFVRRQVAKSLKYLKRA 291

Query: 216 FEIYP-YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           ++      A+ LN+LANH+    +      L   A   T+    K+ S Y++AR YH + 
Sbjct: 292 YQNNGDQNAVVLNHLANHYIIGEELEKAHSLATIAYNTTDVKKIKAESCYHIARVYHLRK 351

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           D+++A  YY  +V       +F+ P +GLGQ       F  A+   +KVL+  P+N E  
Sbjct: 352 DFDQAHKYYNHAVSFWP---DFLLPQFGLGQTFTHYNKFSEAIPCLDKVLQTQPNNYEAR 408

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPR---DAQAFIDLGELLISSDTGAALDAFKTAR 391
           K +G +  +LG  EKA   LRK  + +     D + +++L +LL   +   +L  +  AR
Sbjct: 409 KLMGFLCSKLGDTEKAIMHLRKITEFEIENKIDEEVWMELAQLLEKQNPARSLQLYHKAR 468

Query: 392 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL-GDGIWLTLLDSKTKTYVIDA 450
            +LK+    V   +LNNI  ++ ++G+   A + ++ AL   GI            V   
Sbjct: 469 EVLKRKKLPVNTSILNNIASLYQKQGDHAKAMKFYEKALFSCGIQ-----------VEPG 517

Query: 451 SASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 510
           S ++   + + L    +  G         VT+L+N ARL EQ      A  +Y+ I+ + 
Sbjct: 518 SGTVKVVESIDLNDAMKGQG---------VTILYNYARLQEQKQQHNIAYNIYQTIIKER 568

Query: 511 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET 570
            +Y+DAYLR+A+I + R N + +   +  AL+VN  +   L  L  L +K  ++ +A++ 
Sbjct: 569 PNYMDAYLRIASICETRGNNRDASTWLLLALQVNPNHEETLIHLAKLAMKILNFSRAQKY 628

Query: 571 FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT------HLEKAKELYTRVI- 623
                 + +   + A + LGN  +F++ +++  +   + +      +L +A   Y+RVI 
Sbjct: 629 LEKIL-SRNSNHALANVLLGNI-FFSSAKHDGDSQDTDKSRSKYVQYLSRALSFYSRVIE 686

Query: 624 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 683
            +  +NL AANGA  V+ + G+   +K +F  ++E A      Q+PD WINL H++F Q 
Sbjct: 687 SEGGTNLLAANGAATVIGQSGRLSEAKSIFAHLRETAPH----QLPDAWINLGHIHFLQD 742

Query: 684 NFALAMKM 691
            F  A+K+
Sbjct: 743 EFTQAIKI 750


>gi|307104062|gb|EFN52318.1| hypothetical protein CHLNCDRAFT_139104 [Chlorella variabilis]
          Length = 926

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 258/868 (29%), Positives = 405/868 (46%), Gaps = 152/868 (17%)

Query: 58  QREKEEHFIL---ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 114
           +R++ +  IL   +T+  ++A  ++M E    +  G + LAK E   A  AF+  +    
Sbjct: 58  ERDRGQRVILLSNSTKLCHRAQYLNMEEQLPELVLGAVALAKNEAMVARKAFEKAMRMRC 117

Query: 115 DNVPAL---LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKA 171
           +  P++   L  A + FN+  Y+D+L  YK+AL+  PSCP  +RLGI  C  K+G   KA
Sbjct: 118 NGRPSIAPHLALANLHFNQRNYTDALRLYKQALRSCPSCPPEVRLGIAACCLKMGNTDKA 177

Query: 172 RQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN 231
             A++R L+L P+   AL+ LAV+ L           +   + AFE  P     L  LA 
Sbjct: 178 ELAYKRTLELAPDCTPALLGLAVLKLH----------ISSEEEAFEQDPDNPFVLLLLA- 226

Query: 232 HFFFTGQHFLVEQ-LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
                  HF + Q  ++ A  +    P                                 
Sbjct: 227 -------HFCLRQGFSDKAFQLDPKLP--------------------------------- 246

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
                   P  GL Q+++   + + A +  E VL   P   + L+ LG +Y +     K 
Sbjct: 247 -------LPKLGLAQMRVMNNEPQEAASILESVLIDAPQWIDALEVLGRVYPKTTSKSKV 299

Query: 351 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-------EVPI 403
               ++AA + P++   +  LG+LL S +   AL A+  A  L + A +        +P 
Sbjct: 300 VPQFKEAAALRPKNVGLWELLGDLLASLEPAGALKAYDKAIELRRAAAQADGVGSSHLPP 359

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
            +LNN  V+H   G                               D S S++  + MQ  
Sbjct: 360 RLLNNAAVLHLRAGN-----------------------------TDVSYSLMT-QAMQSA 389

Query: 464 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 523
            R  + G +  +   +VT+ +NLAR+ E      AA V Y+ +L ++  Y D  LRLA I
Sbjct: 390 ARPGSTGVNALV---QVTLGYNLARVKEACGSLKAAEVEYKELLKQFPQYGDCCLRLACI 446

Query: 524 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-D 582
           AKAR + + S                 L +     ++    V  ++      + TD K +
Sbjct: 447 AKARGDTKAS---------------GHLCLFTACSIQEAGMVH-EQVLDKLLEQTDSKQE 490

Query: 583 SYATLSLGNWNYFAAL---RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVV 639
            +A L++ N + ++A    R E  A K E  H   A ELY RV+ +    ++AANG G V
Sbjct: 491 MFAKLAMANLHAYSAPSDRRKEDSAKKAE-VHYSHALELYRRVLEKDEGCIFAANGVGCV 549

Query: 640 LAEKGQFDVSKDLFTQVQEAASGS-VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 698
           LAE G    +K++F QVQEA++ S  F++MPD WINLA+VY AQ  +  A++MY+N LRK
Sbjct: 550 LAELGNLTAAKEVFLQVQEASAASDGFLRMPDAWINLANVYLAQEQYTAAIQMYKNALRK 609

Query: 699 FYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ----KFSA 754
           FY N  A ++LYLAR  Y+A+Q  + K +L +A+HLAP+++ LRFD  V MQ    +++ 
Sbjct: 610 FYDNRSALVMLYLARAQYDADQLPEAKCTLTKALHLAPTDHKLRFDVAVTMQACVLEWAV 669

Query: 755 STLQKTRRTAD-----EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKH 809
            TLQK R   D     + R  V +LE+A R F +L +      H  D +K+  H+ +   
Sbjct: 670 RTLQKKRPAGDPSRYEDFRRAVRDLEHAHRFFQYLHSLG--RGHQLDTRKLQQHINF--- 724

Query: 810 LLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR 869
               AK H +A    E+  R+  + A Q   A +A + A+E  K L E+R+  +E  + R
Sbjct: 725 ---VAKTHGKALAHLERA-REDAQKAAQRQAAAQAEKNAQETSKRLAEERRKAEEGVQRR 780

Query: 870 QQEEH-------FQRVKEQWRSSTPASK 890
           +QEE         ++++EQWR++    K
Sbjct: 781 KQEEQARGNVERLRQLQEQWRTNATMQK 808


>gi|348688373|gb|EGZ28187.1| hypothetical protein PHYSODRAFT_248762 [Phytophthora sojae]
          Length = 943

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 242/891 (27%), Positives = 410/891 (46%), Gaps = 144/891 (16%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYAD--VRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+ QG V QF++IL   S P I+E Y D   R  RI    AL  +       E  ++++
Sbjct: 59  EYYNQGHVAQFQEILAVASEPGIEEIYKDNASRMCRIKFFIALASHAVNAMWNEEDEKKR 118

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           E     A  ++ +A R+D   P T VGK  + +AK E ++A    K VL +++ N+PA+L
Sbjct: 119 EAISQRAVGFFQRADRLDHQHPMTLVGKALMFMAKNEDDRADRFVKSVLISNKTNLPAIL 178

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGA--IRLGIGLCRYKLGQLGKARQAFQRAL 179
           G+A + + + +Y D+ + Y  A+++HP  P A  +R+    C Y LG + KAR   +   
Sbjct: 179 GKALLLYRKKQYKDAKKLYLEAIKLHPRSPQAANMRMCFAYCCYHLGAVEKARAVMRYTA 238

Query: 180 QLDPENVEALVALAVMDLQANE----AAGIR----KGMEKMQRAFEIYPYCAMALNYLAN 231
            LD  NV+A++A A+  L +      A  IR    + M  +  A  I       LN+LAN
Sbjct: 239 SLDETNVDAVIASALWQLASQSREERAVSIRDESSRFMMMIHHAHAIDKTNPTVLNHLAN 298

Query: 232 HFF--FTGQHFLVEQLTETALAVTNH---------------------------------- 255
           H+F  +      V  +  +A+  T+                                   
Sbjct: 299 HYFSQWIPLPCTVSVVRGSAVVSTSKDISSEVSPGQIICIGDKYVAYISRDEDAVSSSGL 358

Query: 256 ---GPTK--SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
              GP +  S S  N+AR  + K        ++   + EI     ++     +G+     
Sbjct: 359 KLDGPYRDESASATNIARKDYDKMFTLAGNAFHSTKIPEIRSESCYL-----MGRGCHAQ 413

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK----------- 359
           G ++ A + +     ++P        L  +Y +  +  KA   L KA K           
Sbjct: 414 GKYKDAYSYYFNAGRLWPKFVLPWFGLAQMYYERKEFTKAASYLEKANKAYPENVEILSL 473

Query: 360 -----------------------IDPRDAQAFIDLGELLISS----DTGAALDAFKTART 392
                                  ++P + +A I   ELL  S    D   A+ ++  A  
Sbjct: 474 LGDIYGKLGKKDEAVVLLRRVVELEPGNVEALIGTAELLHGSPERKDQIIAISSYIAAEK 533

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA---LGDGIWLTLLDSKTKTYVID 449
           ++  A E VP+EV  N+GV+    G+   A   FK A   LGD    +  D ++K+   D
Sbjct: 534 VMNNASERVPMEVYVNLGVLQQRVGKTADAINCFKKALKQLGDD---SSADEESKSEEAD 590

Query: 450 ASASMLQFKDMQLFHRFENDGNHVELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILF 508
           A A                + N +  P    VT+L+N+ R+ E++ +   A  LY  IL 
Sbjct: 591 ALA----------------EENSIPKPSEANVTILYNMGRVYEEMGNRDRAKKLYDAILE 634

Query: 509 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 568
            +  Y D  LRL  + + R     +I++ ++ L+V+     A  + G++ LK  +WV A+
Sbjct: 635 VFPRYTDCLLRLGCMLRDRGQDADAIKMFDKVLEVDPTCAEACLLQGNIHLKKREWVFAQ 694

Query: 569 ETFRAASDATDGK-DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHT 627
           + +         K D YA LS+GN  + + L  + R  K    ++  ++  Y + +  H 
Sbjct: 695 KKYEKVMGMPGLKNDPYAFLSMGNI-FMSNLGEKNRYTK----NMSLSEVYYKKTLAAHP 749

Query: 628 SNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 687
            N+YAANG G+++AEKG F+++K +F+QV+EA+       MPD WINLAH++ A+  +  
Sbjct: 750 HNIYAANGLGIMIAEKGNFELAKQIFSQVREASP-----DMPDAWINLAHIFVAEERYQE 804

Query: 688 AMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGV 747
           A+++Y  CL K Y   D ++LLYLA+ +YE++ +  C  +L R +H+ P++  L +++G+
Sbjct: 805 AIQLYTVCLTKCYQGQDLEVLLYLAKAYYESKDFPSCISTLSRGLHMYPNDLRLWYNSGL 864

Query: 748 AMQKFSASTL-QKT-------------RRTADEVRSTVAELENAVRVFSHL 784
           A + ++ +TL Q+T             +RT  +V+  + +L+ A R+F  L
Sbjct: 865 AQEDYAVTTLGQETVATRSGSGSAVPQQRTMADVQRAILDLKRAQRIFCFL 915


>gi|384497970|gb|EIE88461.1| hypothetical protein RO3G_13172 [Rhizopus delemar RA 99-880]
          Length = 880

 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 249/894 (27%), Positives = 432/894 (48%), Gaps = 119/894 (13%)

Query: 36  ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI-DMHEPSTWVGKGQLLL 94
           +++ +L  +      L + +T + +++ H   A Q+ N+A RI + +EP T+V KG L L
Sbjct: 20  QKLPLLTLIATLNLRLARKQTDETQRQRHLDEAAQFINEADRIHNQYEP-TFVVKGNLYL 78

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA- 153
              +V++A+ +F +VLE   + +PALLG+A ++++  +Y  +L+ Y+ AL+       A 
Sbjct: 79  LTRKVDEAARSFNMVLEKRPNCIPALLGRAKIQYHLQQYKAALKTYQDALKYSHGRFSAV 138

Query: 154 -IRLGIGLCRYKLGQLGKARQAFQRALQLDP-ENVEALVALAVMDLQAN---------EA 202
            IRLGI  C  +L    +A+ A +R +   P  N  AL+ LA+++L  +         + 
Sbjct: 139 EIRLGIAQCFAQLKMYHEAKIALKRCIDTSPAPNSTALIMLAIIELNESKDMENGALQQE 198

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
             +R G++ MQ++ +     A                      +  AL   ++  TK+ +
Sbjct: 199 TSLRHGLQHMQQSHQANTMAA----------------------SSRALNTASNNATKAEA 236

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
            Y +AR++H   DYE A  +Y  ++ E+N  H  I   +G+GQ Q+K G+  +A+  FEK
Sbjct: 237 SYQIARTHHQTEDYENAYKFYSQAL-ELNPDH--ILAQFGMGQTQIKRGEHDAAIEIFEK 293

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI---SSD 379
           +    PD  E +K LG +Y  + + +K+  +  K  K    D   +      LI   S D
Sbjct: 294 LHASQPDCIEVMKVLGSLYGLVRKRDKSTAVFDKLLKHVDDDPLLYYQQALALINDLSED 353

Query: 380 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 439
             AA +  K           ++  ++LNNI V+H   G++  A   +  A+         
Sbjct: 354 EQAAQERIK-----------QIKPQLLNNIAVMHHSLGKYSDAEHYYSLAIQ-------- 394

Query: 440 DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 499
                    +A A+  + KD+                  K+T+ +NLARL E+  +T  A
Sbjct: 395 -------ATEACAN--EEKDL------------------KLTMSYNLARLYEEKLETEKA 427

Query: 500 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 559
           + +Y  ++  Y  YVDA+LR+ AI ++      +IE   E          A  M+G  + 
Sbjct: 428 TAIYTKLIEDYPSYVDAHLRMGAIEQSLGRSTEAIEYYKEVFDTEPLDAKAWIMIGQAQA 487

Query: 560 KNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHLEKAKE 617
            N + + +K +F       D  D Y  ++LGN++   A  L++EK A +  A   + A  
Sbjct: 488 LNTEKL-SKRSFEKVLKDCDKNDLYTHVALGNYHCMTARELKSEK-AKQQRADAYKLAAN 545

Query: 618 LYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
            Y++ + +  +N+YAANG  + +AE G  + +KDLF QV+E+      V  P+VW+NLAH
Sbjct: 546 FYSQTLRRDPTNVYAANGLAITIAENGHIEQAKDLFNQVRESD-----VSNPNVWVNLAH 600

Query: 678 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY-------EAEQWQDCKKSLLR 730
            Y     +  A+ MY NC +KF+ N D  +LL LAR  Y       + E   +  K+  R
Sbjct: 601 AYVELKQYKQAIVMYGNCSKKFFNNKDTNLLLCLARAQYILAKSEKDHETMYEALKNTER 660

Query: 731 AIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAAS 788
           A+HL P++ T  ++  +  Q ++   S L + +R +  +R  +  LE   R F  L +  
Sbjct: 661 ALHLNPADKTTLYNLALVQQSYAQQISDLPQQQRDSASMRRAIGHLECGQRTFHTLISVE 720

Query: 789 NLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE--EQQNRQRQEAARQAALAEEARR 846
              L  +D+K +     Y + L    ++ R+ AE+   E++ RQ+ E A++    E A++
Sbjct: 721 EHTL--YDKKIVEQRERYGETL--RTQLERKLAEQVQFEEEKRQKLEFAKKKREDEIAKQ 776

Query: 847 KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
           +A E+     EKR+LE+ ++  +Q EE  +R+ E+ R        R+  E+D D
Sbjct: 777 RAAEE-----EKRRLEEVER--QQMEEARRRLMEKVREDNMLMASRQIDEDDID 823


>gi|403363721|gb|EJY81611.1| hypothetical protein OXYTRI_20875 [Oxytricha trifallax]
          Length = 1153

 Score =  275 bits (704), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 264/1040 (25%), Positives = 470/1040 (45%), Gaps = 113/1040 (10%)

Query: 5    YFKQGKVEQFRQILEEG---SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 61
            Y+K G+++ F+ +L E    +  + + +  D   +RI  LN L  +     + E  Q   
Sbjct: 54   YYKSGQIKSFQFLLNEALKNNDKKQNPHLFDTIEDRIDGLNRLASFQLAASEYELDQEAY 113

Query: 62   EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP--- 118
            ++ +       N A  + +  P T++ K   L+++G     ++  + V   D+ N     
Sbjct: 114  DKMYAAGMNNINNADNLHIANPQTFITKCFFLMSQGNF---TNTMQYVGHFDQLNYQHPL 170

Query: 119  ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
            A++ +A +EF++  YS SLE  K  L  +P  P +IR  IGLC Y+LG + KAR AFQR 
Sbjct: 171  AMVIKAIIEFSKNNYSGSLELLKGVLAKNPRSPPSIRYAIGLCYYRLGNIEKARFAFQRV 230

Query: 179  LQLDPENVEALVALAVMDLQANEAAG-IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFT 236
            + LD +N+ A+++LA++D+ +    G ++K +EK + +AFE+     + L YLA HFF  
Sbjct: 231  IDLDSQNIMAIMSLAIVDISSQYTDGEVQKDIEKLLAKAFELDKRNPLVLRYLAEHFFQK 290

Query: 237  GQHFLVEQLTETALA----------VTNHGPT--------KSHSYYNLARSYHSKGDYEK 278
                +  Q+    L                P         KS   + L +  H   +Y++
Sbjct: 291  KNFLVANQMCLNGLKSLDRYRRNENTVKENPNFRKDLEYLKSDLNFILGKIQHIDENYQE 350

Query: 279  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL--EIYPDNCETLKA 336
            A  +Y  ++K     H +    + LG+V     +F+ A   FE +L  + + D  E L+ 
Sbjct: 351  ALNFYQKAIK--TNSHNY-SAQFNLGKVYFSFNNFQEAEHCFEALLANQKHKDCYEALRL 407

Query: 337  LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 396
            L     + G+I ++ EL ++  +++P+D +A  ++ ++   +D  A+L  +++   +++ 
Sbjct: 408  LAQTKARQGKIPESVELFKRVLELNPQDFEANYEIAQMFEQTDPKASLVYYESGLRIMQH 467

Query: 397  AGEE--------------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 442
              EE              +P E+L N+G +  E G+ + A  SF  A+ +   L  L   
Sbjct: 468  EIEERLRNKEELSQEDQIIPPEILINVGTLRLEVGKTQEAFDSFSQAIKNCNQLLELKKD 527

Query: 443  TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 502
             +  +     S+L                        +T  FNL    EQ H    AS  
Sbjct: 528  DQKLI-----SIL------------------------ITSKFNLGCWYEQHHRYGEASDQ 558

Query: 503  YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP-------NALSMLG 555
            Y+ I+     YVDAYLRL  +A+ R + + ++E ++E  K   K P       N L + G
Sbjct: 559  YKQIIKMEPTYVDAYLRLGYLARNRGDYKRALEYIDEGKKNQIKKPEEYSKPINQLCIRG 618

Query: 556  DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 615
             +     +  KA E FR   +    +DSYA +   N NY  + R  +   K +   L+KA
Sbjct: 619  KILTDISELDKAYEEFRFVLEKLSNRDSYAIIGQANINYEWSTRC-RHDIKQQEHLLKKA 677

Query: 616  KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
             + Y  V+ Q  +N +A  G   +L+E  + + S ++F  ++E         +    INL
Sbjct: 678  MDKYMIVLEQDEANAFATLGIANILSEHNKINESMEIFKALKENCPN-----IHHALINL 732

Query: 676  AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 735
             H+   Q N+  A+  Y   L KF  N + +I LYL++ +++   +++CKK L + +   
Sbjct: 733  GHLSVYQENYIAAINFYNKALEKFDGNCNLEIELYLSKAYFKMHDYENCKKILQKLLVRY 792

Query: 736  PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 795
            P +  L+++ G+ + + +  T  K  R   E +  +A+L  A ++  H+           
Sbjct: 793  PQDLRLKYNLGLCLMQQANQTFNKNSRKVSETQEAIAQLNYANKMIQHIIRVRASQQQTG 852

Query: 796  DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR--QRQEAARQAALAEEARRKAE-EQK 852
             E+ +    +Y    +   ++ +E A  +   N   +R    R+   A  A  K + E +
Sbjct: 853  HEQLL----QYLPSNISKDQLDQERANFQLMFNECDERITYLREMITASSAYLKTDIEIQ 908

Query: 853  KYLLEKRKLE-DEQKRLR-QQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRR 910
            K + EK  L+ +E KR++ QQE+H +  +EQ R      K +E +E + +   +      
Sbjct: 909  KEMQEKEDLKANEMKRIQSQQEQHEKDRQEQIR--LIQEKEQEIAEQNAEAAANLALELL 966

Query: 911  KGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENAN 970
               K+R  DK      + +  E DMM Y          MN R   G +   D ++E N N
Sbjct: 967  ANDKKRGGDKKRIVGADNDEEEQDMMAY---------MMNSRGDAGILGGSDSELEYN-N 1016

Query: 971  DR--LAAAGLEDSDVDDEMA 988
             R  L    +++SD D ++A
Sbjct: 1017 KRGGLDGISMDESDYDSKVA 1036


>gi|223995619|ref|XP_002287483.1| hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana
           CCMP1335]
 gi|220976599|gb|EED94926.1| hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana
           CCMP1335]
          Length = 891

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 241/834 (28%), Positives = 410/834 (49%), Gaps = 78/834 (9%)

Query: 85  TWVGKGQLLLAKGEVEQASSAF-KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           TW+G+G L LA   ++QA   F ++ L    + +PAL+G A V++    Y+ + + Y R+
Sbjct: 2   TWIGRGMLNLAMNRIDQARFFFEQLTLRECGEILPALIGMAAVKYMEKDYTGAQDLYARS 61

Query: 144 LQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD------ 196
           +   P   GA  R+G G+  YKLGQ+ +A+ AF+RA ++DPENVEALV +AV++      
Sbjct: 62  MTKFPVQSGAATRVGFGMACYKLGQMDRAKAAFRRAQEMDPENVEALVGIAVLEMASLDD 121

Query: 197 -LQANEAAGIRKGMEKMQRAFEIYPYC-AMALNYLANHFFF--TGQHF-LVEQLTETALA 251
            L   E     + + KM     +  +  AM  N+LANH+F+  T + +  V  L + A  
Sbjct: 122 VLDPREYRAEAENVIKMISMANLVDHTNAMVQNHLANHYFWKWTPKDYDRVLSLAKGAYN 181

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
            TN    ++ S Y LAR YH++G+ E A  +Y  + K  + P E     +GL Q  +   
Sbjct: 182 ATNIPEMQAESLYMLARVYHARGEMELANKFYDKACK--HSP-ELSPARFGLAQTLIWDE 238

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK-AQELLRKAAKIDPRDAQAFID 370
            +  A  +   +L    +  + L ALG + V+ G+  + A   L+KA  +DP +A   + 
Sbjct: 239 AYDEAAAHLRLLLGTCSNATDALAALGLLEVKGGKDRREAFIYLKKAIDLDPFNAD--LV 296

Query: 371 LGELLI----SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
           L E L      SD   +LD ++ A  LL+   + VP +VL N+G +H         H   
Sbjct: 297 LIEALALQQNESDYLLSLDRYRKAVRLLEAQQKIVPADVLTNMGALHI--------HLKS 348

Query: 427 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 486
             AL +G                   S +  K      R  N  +        ++V FNL
Sbjct: 349 VVALNEG------------------ESAISVKKSN--GRLRNASS--------ISVAFNL 380

Query: 487 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 546
           ARL E     V A  L++ I+ ++  YV++YLRLA IA+   +L+   E +  A+ V   
Sbjct: 381 ARLHEAAGRIVPAVELHKAIVKRHPSYVNSYLRLACIARDCGSLKDCSEWLKSAVAVAPG 440

Query: 547 YPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAP 605
            P  L+++G+L L   DW  A++ F +         ++Y+ LSLGN  YF    N    P
Sbjct: 441 NPEVLTLVGNLHLSLCDWAPAQKVFDQLLIQKVPKVEAYSMLSLGNI-YF----NNLNTP 495

Query: 606 KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 665
           K  + HL+ A + Y R++ +  +N YAANG G VLAE+G+   +K++F +V+E +  ++ 
Sbjct: 496 KKYSKHLQHAADFYRRILSKDNANAYAANGLGTVLAERGELFKAKEVFNRVREVSGDTIL 555

Query: 666 VQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD--AQILLYLARTHYEAEQWQD 723
               D  +NL H+Y AQ   + A++MYQ+ + +   + D  A++LLY+A  +++  +  +
Sbjct: 556 ----DCLLNLGHIYLAQKKHSEALQMYQSYMNRTRASDDDEAEVLLYIAFAYFDWARQTE 611

Query: 724 CKKSLLRAIHLAPSNYTLRFD--AGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVF 781
              S+L+   +        +D  A   +QK +    +  RRTA EV+  +  LE ++ + 
Sbjct: 612 FALSILKWQWVEARRRMSPYDTIANCVLQKVN----RNIRRTAQEVKYALDGLEESLAIV 667

Query: 782 -SHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 840
            + L   S           +      CKH +D+AK H     ++E++ +  ++  R  A 
Sbjct: 668 QTMLQWKSEGKKVTVPTGMLTDFASQCKHNIDSAKSHLNEELKKEKEAQVLRDFQRIEAE 727

Query: 841 AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRER 894
           A E +R+     +   E ++ E+  ++ RQ+ +    + + W+ +  A+++  R
Sbjct: 728 ATEKQRQLTVTLQKEKEAQEAEERDRKARQKMDQVTNLVDGWKQAAVAAEKAPR 781


>gi|195489044|ref|XP_002092570.1| GE14267 [Drosophila yakuba]
 gi|194178671|gb|EDW92282.1| GE14267 [Drosophila yakuba]
          Length = 940

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 234/861 (27%), Positives = 395/861 (45%), Gaps = 84/861 (9%)

Query: 82  EPSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 140
           +P   V KG L +L+    + A + F  VL   R N+ AL+G+AC+ +NR  Y  +L ++
Sbjct: 90  DPHLQVTKGYLWMLSSSRAQDADALFIRVLRKQRRNILALIGRACLAYNRQDYIGALGYF 149

Query: 141 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 200
           K  L + P  P  +R+GIG C   +G+L KAR +FQ AL+ + +   A++ LA++ L   
Sbjct: 150 KSVLMIQPQGPVDVRVGIGHCFRMMGELEKARMSFQMALEYNAQCQNAMLGLALIKLNQR 209

Query: 201 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
           E    ++G   +  AF++  +    L+ LA+ ++  G H +V  L   AL  T+    +S
Sbjct: 210 EEQTYQEGKLLLAAAFDLNKHNPDVLSILASLYYLDGNHKMVWCLAGNALRSTDSKQMES 269

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
            +Y+ +A+SYH+ G +E A  +Y+ SVK    P  ++ PY G+ Q+ L  G+   A    
Sbjct: 270 LNYFQIAKSYHATGQFESAKKFYVLSVKV--APEGYVLPYVGMAQMYLNEGELHRAKACL 327

Query: 321 EKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
           E  L+  PD    +  L  IY++    GQIEKA E+L K      RD  +++ L      
Sbjct: 328 EAFLKYEPDEPVVMGLLAKIYLEERSPGQIEKAIEMLVKVVASYSRDFNSWLSLAFAYEQ 387

Query: 378 SDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 436
                  ++A++ A ++    G  +PIE LNN+            A ++  DAL      
Sbjct: 388 KRLWPQTVNAYQKAISICSVQGHHIPIEWLNNLANSQLMAKMPAQALETLDDAL------ 441

Query: 437 TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 496
               SK +T                      ++G+H     N +T+ +N   +LE++H  
Sbjct: 442 ----SKCRT----------------------SNGDHKTT--NLLTLHYNRGLVLEELHRF 473

Query: 497 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 556
             A   Y+ I+  Y  Y D YLRL  +A  +N L  +IE   + L  +     A + +GD
Sbjct: 474 DLAEENYKGIIKGYPTYYDCYLRLGVMAMQKNELAHAIEYFKDVLNEDNSSLTARTYMGD 533

Query: 557 L--ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW-----NYFAALRNEKRAPKLEA 609
               L  D +         AS  +  KD+Y T+++GN+       + A  N + A K + 
Sbjct: 534 CFNRLSLDKYATFNYNMILASQ-SKFKDTYVTMAMGNFCLKKLQTWMAGGNFRAARKQQ- 591

Query: 610 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 669
              EKA   +  V+  +  NL+AANG G VL+          +F Q+ E+ +      +P
Sbjct: 592 ---EKALHFFGTVLDCNPRNLWAANGIGAVLSSCKNLSAGAAIFMQIIESGNKC----LP 644

Query: 670 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 729
            + +N AH+   +G + LA++ Y+ CL+ F       ++ YLA+  Y+    +  K  LL
Sbjct: 645 AI-LNSAHIALERGQYRLAIQTYERCLKDFLPKNCVDVMHYLAKALYDEGSTRQAKMWLL 703

Query: 730 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
           +  HLAP +  + F+  + ++K +   L   R   DE++S V EL+ A   F HL+    
Sbjct: 704 KVRHLAPQDPFVIFNLALTIKKEADQALALPRPQLDELKSIVEELKVAYNYFYHLN---- 759

Query: 790 LHLHGFDEKKINTHVEY-----CKHLLDAAKIHREAAERE--EQQNRQRQEAARQAALAE 842
                 +  KI+ H        C+ L+    + ++         ++R R +  R  A  E
Sbjct: 760 -----LNHPKISVHASAKCANECQKLMVDLVVKQDQVRESLASAEDRIRLQNQRYQAHLE 814

Query: 843 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWR----SSTP-ASKRRERSEN 897
             R++A ++++   E R L + Q    Q+ E  +R ++ +     S  P  S    R   
Sbjct: 815 HLRQQARQREE---EDRVLRENQN--AQRMEVLERARKIFSAPLLSEVPKKSTGNGRGRK 869

Query: 898 DDDEVGHSEKRRRKGGKRRKK 918
           +  + G    +  K G  +KK
Sbjct: 870 NQQKEGQEANKASKDGTPKKK 890


>gi|325186228|emb|CCA20729.1| RNA polymeraseassociated protein CTR9 putative [Albugo laibachii
            Nc14]
          Length = 1135

 Score =  268 bits (686), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 194/676 (28%), Positives = 342/676 (50%), Gaps = 74/676 (10%)

Query: 245  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
            L   A   T     +S S Y + R  H++G Y+ A  YY  + +  +    F+ P++GL 
Sbjct: 381  LAGNAFHSTKIAEIRSESCYFMGRGCHAQGKYKDAYSYYFNAGRLWSN---FVLPWFGLA 437

Query: 305  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
            Q+  +  ++  A  N EK  + YP+N E L  LG++Y +LG+ + A  LLR+   ++P +
Sbjct: 438  QMYYERKEYGKAAINLEKANKAYPENVEILSLLGNVYGKLGKKDDAIILLRRVVDLEPGN 497

Query: 365  AQAFIDLGELLISS----DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
              A I   ELL  S    D   A+ ++  A  +++ A + +P+E+  N+GV+    G+ +
Sbjct: 498  VDALITTAELLHGSNDRKDQIIAISSYIAAEKVMRNALDTIPMELYVNLGVLQHRVGKIK 557

Query: 421  SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV--ELPW- 477
             A   FK AL +     LL  +  T  ++ + +               D N +  ELP  
Sbjct: 558  EAIACFKQALNE-----LLRHEATTESLEETKT---------------DTNDLVQELPSP 597

Query: 478  NK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
            NK  VTVL+NLAR+  +I D + A  LY  IL K+  Y+DA LRL  + +    +  + +
Sbjct: 598  NKLNVTVLYNLARVYGEIGDRIVAQTLYENILRKFPTYIDAILRLGCMRRDAGAMAEAAQ 657

Query: 536  LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLSLGNWNY 594
               +AL+V+     A  + G++ L   +W+ A++ +       + K D YA LS+GN  +
Sbjct: 658  YFEKALEVDPFCAEACLLHGNMHLDRREWLLAQKKYERVMGMPNMKNDPYAFLSMGNI-F 716

Query: 595  FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 654
               L  + R  K    ++  ++  + + I    SNL AANG G ++AEKG  + +K +FT
Sbjct: 717  MCNLGEKNRYTK----NMSLSEGYFKKTIQSQPSNLQAANGLGTLVAEKGNLESAKLIFT 772

Query: 655  QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART 714
            QV+EA+      +  D W+NLAH+  A+  +A A+++Y  CL K Y+  D +++LYLA+ 
Sbjct: 773  QVREASP-----ETADAWVNLAHILVAEERYAEAIQLYTVCLAKCYHGRDLEVMLYLAKA 827

Query: 715  HYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK-----------TRRT 763
            +YE++ +  C K+L RA+H+ P++  L ++  +A + ++ +TL +           T+RT
Sbjct: 828  YYESKDYPKCIKTLSRALHINPTDLRLWYNLALAQEDYAVTTLGQESTPQAGQHLVTQRT 887

Query: 764  ADEVRSTVAELENAVRVFSHL----------SAASNLHLHGFDEKKINTHVEYCKHLLDA 813
              +V+  V +L  + + F  L           +  +     F+++K+  H ++C   L  
Sbjct: 888  MADVQRAVLDLSKSQKTFHFLLQLMEAQGASKSKGSSGSFPFEKEKVIDHEKFCADTLTK 947

Query: 814  AKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKR-----L 868
            A  H E   ++E+++R   EA R+     E R + E++      +RK ++E +R     L
Sbjct: 948  ASYHLEFERQKEEKHRLEVEAQRKMLREYEDRVEREKET-----ERKKDEELRRHRADVL 1002

Query: 869  RQQEEHFQRVKEQWRS 884
             +QEE  + +   W++
Sbjct: 1003 MKQEERLKALSAGWKA 1018



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 123/243 (50%), Gaps = 12/243 (4%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYAD--VRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+ QG V QF++IL   S P I+E Y D   R  RI   NAL  +       E  +++K
Sbjct: 55  EYYNQGCVNQFQEILSVASEPGIEEIYKDQASRVCRIKFFNALACHAINSMWNEEDEKKK 114

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           E     A  Y+ +A R+D   P T +GK  + +AK E E+A    K VL  DR N+PALL
Sbjct: 115 EAIAQRAVGYFQRADRLDHQYPMTLIGKALMFMAKNEDERAERFLKSVLRTDRQNLPALL 174

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGA--IRLGIGLCRYKLGQLGKARQAFQRAL 179
             A + + R +YSD+      A+++HP  P    +R+    C Y LG   KAR   +   
Sbjct: 175 ANAMLLYRRKKYSDAKRLCLEAIKLHPKSPQGSRMRMFFSYCCYHLGCTEKARAVMKYGA 234

Query: 180 QLDPENVEALVALAVMDLQA----NEAAGIR----KGMEKMQRAFEIYPYCAMALNYLAN 231
            LD  NV+A++A A+  L +      A  IR    + M  ++ A  I     M LN+LAN
Sbjct: 235 SLDDTNVDAVIANALWQLASLTREERAKSIRNEGSRFMTMIRHAHAIDKTNPMVLNHLAN 294

Query: 232 HFF 234
           H+F
Sbjct: 295 HYF 297


>gi|328766912|gb|EGF76964.1| hypothetical protein BATDEDRAFT_36145 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1067

 Score =  268 bits (684), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 272/1023 (26%), Positives = 467/1023 (45%), Gaps = 99/1023 (9%)

Query: 4    EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYER--IAILNALGVYYTYLGKIETKQREK 61
            +Y K+  V++F   L++G   EI +     R E   I ILN L  +Y    K E+     
Sbjct: 54   QYLKRDMVDEFEIFLQKGR--EIGQARNSRREENSLILILNTLASHYIEKAKSESDPSIH 111

Query: 62   EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
            ++    ATQ  N A R+D     T VGK  ++L++ +++QA   F+  L  + + +PAL+
Sbjct: 112  DQFIANATQILNDAERLDRMHLYTIVGKANVMLSRNQLDQALYTFRGALNQEPNFLPALI 171

Query: 122  GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
            G +CV F +  +  +L  Y+  L+++P+    +R+ IG+C ++LG   KA  AF RA+ L
Sbjct: 172  GSSCVHFLKQDFKSALAGYQTILRINPTIKPDVRIPIGICFHRLGMEKKAHAAFLRAVSL 231

Query: 182  DPENVEALVALAVMDLQANEAAGIRKGMEK-----------MQRAFEIYPYCAMALNYLA 230
            +P+N++AL  L++  L+ N A       E+           + R +      ++  N ++
Sbjct: 232  NPDNLDALALLSI--LENNRAISTTATPEEKNTAMTAAGGYLARGYRQNNRHSIIFNLMS 289

Query: 231  NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
            + FF  G +      +E+AL +     + + SY    +   ++ +Y+   L Y   VK  
Sbjct: 290  DRFFSKGDYGKARVFSESALRLPGSKMSCADSYALRGKIAQAEMNYD---LAYTCFVKAS 346

Query: 291  NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG-QIEK 349
                + +   +GLGQ+Q+    F  A+   EKVL   PDN E L     IY QL    +K
Sbjct: 347  ELNPDSVLIQFGLGQLQIYKKQFDEAMVPLEKVLAKVPDNYEALAIATEIYAQLPDSAQK 406

Query: 350  AQELLRKAAKI------------DPRDAQAFIDLGELLI-------SSDTGAALDAFKTA 390
              E L +  KI               D   +I+  ELLI         D   A  AF  A
Sbjct: 407  VSEKLDRLKKIFRSYFEEEHGFKAKTDDDEYINDPELLIVIGCYFSKQDLKQAEKAFDRA 466

Query: 391  RTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 449
              +L+   +  V  E+ NN+G ++    +    H S    LG     +L DS++   +++
Sbjct: 467  IRILETIPDMSVAPELFNNLGALYHLDAQQLIQHAS---DLGSSRPTSLGDSRSALQLLE 523

Query: 450  ASASMLQFKDMQLFHRFENDGNHVELPWN-----KVTVLFNLARLLEQIHDTVAASVLYR 504
             + S   F D      FE     VE P +     + TV +NLARL E + DT  A   Y 
Sbjct: 524  LAKS---FYD----RAFEASPTTVE-PGDASDILQTTVRYNLARLNETLGDTEKAKAQYL 575

Query: 505  LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
             IL  +  YVD  LRL  I++   +   +++  ++AL ++     A S++ +  L++   
Sbjct: 576  AILNDHPAYVDCLLRLGYISQNSGDNATALDRYSDALAIDENNVKAWSLVANAHLESKAL 635

Query: 565  VKAKETFRAASDATDGKDSYATLSLGNWNY-FAALRNEKRAPKL-------EATHLEKAK 616
              A++ F       D  D ++  S GN    FA  R + +  KL          H ++A 
Sbjct: 636  RPARKAFEKILQEIDKYDMFSLCSTGNMCLKFA--RTDSKQDKLFLGIGVQRDIHCKRAV 693

Query: 617  ELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 676
            E +T+ +   + N+YAA G  +  A  G  D ++++ TQ+QEAA  ++     +V +NLA
Sbjct: 694  EFFTKALRLDSRNMYAATGIAIAFAYFGDMDEAREILTQIQEAAGTNI-----NVTLNLA 748

Query: 677  HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKS----LL 729
            H+    G    A+ +Y++ ++K     D  ++  LAR HY   + E+  D   +    L 
Sbjct: 749  HILVELGLPHSAIPLYES-IKKRSTTADIDVIRSLARAHYIIAKTEKLPDAMATVAARLK 807

Query: 730  RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAA 787
             A  L P++  L+++  +A Q+++   +   K +R    +RS V  LE + + F  LS  
Sbjct: 808  EACDLKPNDLALQYNLALAKQQYAQILNEQPKEKRPLSLLRSAVIGLEASEKTFEELSKH 867

Query: 788  SNLHLHGFDEKKINTHVEYCKHLLDAA--KIHREAAEREEQQNRQRQEAARQAALAEEAR 845
                  G+D ++     +Y K +      KIH       +++ R  +  A++   AE  R
Sbjct: 868  KPNPQLGYDVERAKERAKYSKGVRRTTEKKIHETEVLDSQREERLAEIRAKREEAAEIKR 927

Query: 846  RKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASK----RRERSENDDDE 901
              +EE+++ L E+ +LE+  ++ R+ +   Q   E+ R      K    RR+ + N+DDE
Sbjct: 928  --SEEKQRALNEQLRLEELDRKRRELQAIVQEDNEKMRVELEMEKAKPIRRKAATNEDDE 985

Query: 902  ------VGHSEK---RRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYR 952
                  V  SE       KG ++RK+ +  R    ++ A+    +     +DED  M  R
Sbjct: 986  DDMNQHVDQSEADGFTPSKGKQKRKRKEKMREKQSSDEAQILNTNSTIASDDEDEMMMKR 1045

Query: 953  EPI 955
              +
Sbjct: 1046 AKV 1048


>gi|195380573|ref|XP_002049045.1| GJ21372 [Drosophila virilis]
 gi|194143842|gb|EDW60238.1| GJ21372 [Drosophila virilis]
          Length = 1254

 Score =  267 bits (682), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 215/832 (25%), Positives = 405/832 (48%), Gaps = 81/832 (9%)

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           L+L +  ++ A + F  VL     +VPALLG+AC+ +NR  Y  +L ++K  LQ HP  P
Sbjct: 119 LMLTEARLQDADNHFVSVLRQMPYSVPALLGRACLAYNRQEYRVALGYFKSVLQHHPHGP 178

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
             +R+GI  C  ++G L  AR+AF+ A+Q +   + AL+ +A + L   + A   +    
Sbjct: 179 ADVRVGIAHCFLQMGDLDSARRAFEMAVQRNGRCINALLGIAQLKLNERQRAANMEATNL 238

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
           +  AFE+     + L++LA + +++  +  ++     A  +T++   K+ + + +ARS+H
Sbjct: 239 LCAAFELNHRHPVVLSWLACYLYYSRNYGKMQTAAGNAYLITDNPLLKAQNCFLIARSFH 298

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
           ++ ++++A  +Y  ++K ++   E+  PY G+ Q+ ++ G    A  +   +L++ PDN 
Sbjct: 299 AQSNFDRAFDFYGKALKCLS---EYAPPYLGIAQMYVRRGQLDLAEHSLRSLLKLLPDNP 355

Query: 332 ETLKALGHIYVQL---GQIEKAQELLRKA-AKIDPRDAQAFIDLGELLISSDT------- 380
             L+ L  +Y Q    G+++KA +L + A  +   RD     D    L  + T       
Sbjct: 356 HGLRMLATLYAQADSPGKLDKAIQLFKSALERPGARD-----DYDTWLGLAGTYERLQLW 410

Query: 381 GAALDAFKTARTL---LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 437
             A+DA++ A ++   L+K  +E PI  LNN+  +    G+ E+A Q+   AL       
Sbjct: 411 EQAIDAYEQAVSIYLRLQKTTKEAPIAWLNNVAALQLHAGQPEAALQTLDKALST----- 465

Query: 438 LLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 497
             + K  T                          H E   N +T+ FN AR+LE++H   
Sbjct: 466 --NPKGAT------------------------QEHCEC--NILTMRFNRARVLEELHLAD 497

Query: 498 AASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
            A   Y+ ++ +Y +Y D+YLRL  +AK RN + +++E     L++      A + LG+L
Sbjct: 498 QAEDSYKQLIAEYPNYYDSYLRLGIMAKDRNQIIMAMEYFKAVLQLENDNVAARTYLGNL 557

Query: 558 ELKNDDWVKAKETFRAASDATDG-KDSYATLSLGNWNYFAALRNEKRAP-KLEATHLEKA 615
             K     +A   +           DSY  +++GN       R       ++   + E A
Sbjct: 558 YAKQGALSQAMCNYNVIMRRPGSFGDSYMLVAVGNVCLVKVQRTTANGQLEMAKQYQENA 617

Query: 616 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
            +L+ + + Q+  NL+AANG GV L+  G     + +F Q+ E++      +  +  +N 
Sbjct: 618 LQLFRKALEQNQRNLWAANGIGVALSNHGHLADGESIFKQIVESSK-----RCTEAILNT 672

Query: 676 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 735
           AH+   Q ++  A+ +Y+ CL++F      + +  LA+  Y+  Q+++ KK L +A H+A
Sbjct: 673 AHIAMEQEHYTEAIDIYKQCLKEFLPTNSVKEMHLLAKAFYQTGQFEEAKKLLQKARHVA 732

Query: 736 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 795
           P +  + ++ G+ +++    T  K R    E++    EL+ A  +F +L         G 
Sbjct: 733 PQDLMILYNLGIVIKQDIRQTYGKQRTDRTELQRAEQELKMAQSIFQYL---------GD 783

Query: 796 DEKKINT---HVEYCKHLL-DAAKIHREAAERE--EQQNRQRQEAARQAALAEEARRKAE 849
            E+ + T       C  LL +  +  +  +E +  E++  +RQ+  R  A A+E  RK +
Sbjct: 784 KEESLQTAYKQANKCSKLLANVMEDFKNLSELDEVEKKTEERQKVKRDKAKAKEISRKKD 843

Query: 850 EQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDE 901
             KK   ++++ E E  +  ++EE     K+++R   P+ K +E+  + D++
Sbjct: 844 YSKKR--DQKETETEAPQKSEKEEPM--CKDRYRKKDPSKKHQEKISSADEQ 891



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A Q + KA  ++ ++ + W   G G  L   G +    S FK ++E+ +    A+L  A 
Sbjct: 617 ALQLFRKA--LEQNQRNLWAANGIGVALSNHGHLADGESIFKQIVESSKRCTEAILNTAH 674

Query: 126 VEFNRGRYSDSLEFYKRAL-QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           +   +  Y+++++ YK+ L +  P+        +    Y+ GQ  +A++  Q+A  + P+
Sbjct: 675 IAMEQEHYTEAIDIYKQCLKEFLPTNSVKEMHLLAKAFYQTGQFEEAKKLLQKARHVAPQ 734

Query: 185 NVEALVALAVM 195
           ++  L  L ++
Sbjct: 735 DLMILYNLGIV 745


>gi|167535854|ref|XP_001749600.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771992|gb|EDQ85651.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1012

 Score =  264 bits (674), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 189/668 (28%), Positives = 327/668 (48%), Gaps = 82/668 (12%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
           +++ A   F IVL  D  +  A +G A V++ +G+Y D+L+ ++  L   P CP  IR+ 
Sbjct: 166 DLKDARVLFDIVLTEDTRDSIARIGVARVDYMQGKYEDALQHFRAVLGDRPDCPVGIRVA 225

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           I LC  +LG+L +A  AF R L+L+P NV ALVA AV+++   E + + +G + ++ A+ 
Sbjct: 226 IALCLAQLGRLDQATAAFARVLELEPHNVTALVATAVLEMNKAEDSSLAEGKKLLKEAYS 285

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           +       LN+LAN FF  G +  V  L+  A         ++ + +++AR YH + +Y+
Sbjct: 286 LDNNNPNILNHLANLFFIKGAYDKVLSLSRHAQNCRPTAAQRAETMFHMARVYHIQENYD 345

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A  +Y  +V E   P  F+ P++G+ Q+ ++   +  A+ + E V +  P N E++K L
Sbjct: 346 EAFKHYYKAVHE--DP-AFVLPHFGVAQLYIEKRKYDKAIEHMEIVYKHQPGNYESMKVL 402

Query: 338 GHIYVQ---LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTL 393
             +Y Q     Q  KA+ L ++   + P D +A+I+L  L  + +   A++ ++ A + L
Sbjct: 403 ASLYAQQDSRTQRNKAKSLFQQITTLRPFDIEAWIELAMLHEAEEPAQAVELYERAIKDL 462

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
              A  +V  E+ NN+G ++F    ++ A  +F+DA        ++    +    +A+  
Sbjct: 463 EAVAASQVTPELKNNLGAVYFLVERYDKAEAAFRDAF-------IMTENMRQQADEAT-- 513

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                          DG  +      VT+ +NLAR +E  +    A ++Y+ +L ++  Y
Sbjct: 514 ---------------DGQAL-----GVTIQYNLARTMEATNRINEAIIIYKQLLKEHPAY 553

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
           VD YLRL  IA+ R                 G + NA           DD +  KE    
Sbjct: 554 VDCYLRLGTIARER-----------------GDFLNAKQYY-------DDVLHFKE---- 585

Query: 574 ASDATDGKDSYATLSLGNWNYFAALRNE-KRAPKLEATHLEKAKELYTRVIVQHTSNLYA 632
                   D Y+ + L N      L N+  + P ++      A++ Y +V+   + N+YA
Sbjct: 586 --------DGYSEMCLAN----ICLANDGHKKPGMDR---HAARQRYEKVLRADSHNIYA 630

Query: 633 ANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 692
           ANG   VLA   ++  SKD+  QV+EA       +   +W NLAH+Y  Q +F  A+++Y
Sbjct: 631 ANGIACVLALDDEYSASKDILLQVREAVGTD--RRAAQIWTNLAHLYVKQESFMEAIQLY 688

Query: 693 QNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 752
           +  L +F++N D  IL YL R  Y+A  + D  K+  + +HL P+     F+  +   + 
Sbjct: 689 KAVLSRFFHNRDTDILSYLMRAEYKAGLYHDAMKTSQKLVHLEPTEDRHWFNLAMCQLQV 748

Query: 753 SASTLQKT 760
           S  T+  T
Sbjct: 749 SKITIDAT 756


>gi|67967697|dbj|BAE00331.1| unnamed protein product [Macaca fascicularis]
          Length = 403

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 162/433 (37%), Positives = 242/433 (55%), Gaps = 41/433 (9%)

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
           Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV L
Sbjct: 2   YRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGL 61

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
           AV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   
Sbjct: 62  AVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHN 121

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
           T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD
Sbjct: 122 TEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGD 179

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFI 369
             +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I
Sbjct: 180 KENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWI 239

Query: 370 DLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 428
           +L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F  
Sbjct: 240 ELAQVLEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF-- 297

Query: 429 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNL 486
                  L  LD                        R + +  H E  +N ++V   +NL
Sbjct: 298 -------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNL 326

Query: 487 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 546
           ARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  
Sbjct: 327 ARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQD 386

Query: 547 YPNALSMLGDLEL 559
           +P+A S++G+L L
Sbjct: 387 HPDAWSLIGNLHL 399


>gi|195429292|ref|XP_002062697.1| GK19554 [Drosophila willistoni]
 gi|194158782|gb|EDW73683.1| GK19554 [Drosophila willistoni]
          Length = 1025

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 204/796 (25%), Positives = 367/796 (46%), Gaps = 65/796 (8%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y+   + E F  +LE  +  +  + Y   + + I     L  Y+T +   ET  R     
Sbjct: 36  YYSARQFESFVMLLE-AAIVKSGKLYVGYKEDLIRTYTLLAGYFTNMAYRETGNRRAALQ 94

Query: 65  FILATQYYNKASRIDMHEPSTWVGKG-QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
             + T   N A  +  ++    V +   ++L+ G  + A + F  +L+    NVP L+G+
Sbjct: 95  AKI-TNLLNAAQGLQPNDRQYSVVRAYAMMLSSGRSQDADNIFLSILKIMPHNVPCLIGR 153

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
            C+ +NR  YS +L ++K  L  +P  PG +R+G+G C  K+  +  AR+AF+ AL+ + 
Sbjct: 154 GCLAYNRRDYSGALGYFKSVLMHYPRGPGDVRVGVGHCFLKMDSVDWARRAFELALECNG 213

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
               ALV +AV+ L   +    ++ +  +  A+E Y    M L+ LA H+++   +  V+
Sbjct: 214 RCQNALVGMAVIKLNVLDKQSQQEAIYLLCAAYEQYNRDPMILSCLAQHYYYVKSYERVQ 273

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L   A+A T+    ++ ++  +ARS+H+ G +++A  +Y  SVK    P+ +  P+ GL
Sbjct: 274 TLAGNAIAHTDSAELRAQNFLQIARSFHATGHFDRAFEFYKMSVKSC--PNGYAPPHLGL 331

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKAQELLRKAAKI 360
            Q+ ++      A+   E +++I P+N   L+ L  +YVQ     +++ A E L K+  +
Sbjct: 332 AQMYMRRNQLDKAMNCLETLIKIVPNNLYGLRLLSMLYVQDNAGPKVDGALEFLNKSLGL 391

Query: 361 DPRDAQAFIDLGELLISSDT-------GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 413
            PR  +   D    LI +            + +++ A  + +  G+ +P+E+ NN+G   
Sbjct: 392 SPRLNK---DFDIWLIYARAYENKELWSQTIKSYEQAVKIFQDIGQSIPVELFNNLGASL 448

Query: 414 FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 473
               + + A             L  LD                       H    D N  
Sbjct: 449 MYGKQPQKA-------------LVTLD-----------------------HALAGDTNES 472

Query: 474 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
               N++T+ FN AR+LE++H    A  LY+ ++ +Y  Y+D Y+RL  +A  R+    +
Sbjct: 473 ----NRLTISFNRARVLEELHREDLAENLYKHLIQEYPKYIDCYIRLGKMAAKRHQYVTA 528

Query: 534 IELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDG-KDSYATLSLGNW 592
           ++   E LKV+    +A  ++G+  +K+    +A           +  +DSY  +++GN 
Sbjct: 529 MDYYKEVLKVDNDNLSARCLMGNYFMKHGMTTQAMYCHNVILRRRETRRDSYTMVAVGNV 588

Query: 593 NYFAALRNEKRAP-KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 651
                 R   R        H EKA +L+ R + Q+  NL+AANG G  L   G  +  + 
Sbjct: 589 CLINVHRTFGRLEDSTSKRHQEKALQLFRRALEQNPRNLWAANGIGAALCAGGLLNEGEA 648

Query: 652 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYL 711
           +F Q+ E++            +NLA+V      +  A +MY+ CL  F       I+  L
Sbjct: 649 VFKQILESSKYCT-----QSLLNLANVSLELKKYKQASQMYKQCLDDFLPPKSVAIMQLL 703

Query: 712 ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTV 771
           AR+ Y   + ++ K  LL+A H+AP +  L ++  V ++++S       R    E+    
Sbjct: 704 ARSLYLGGKAKEAKFVLLQARHVAPHDLILLYNLAVTIKQYSLMVFGMQRPDLKELMLAE 763

Query: 772 AELENAVRVFSHLSAA 787
            EL+ A+R F  L A+
Sbjct: 764 QELKVALRYFDGLVAS 779


>gi|194756148|ref|XP_001960341.1| GF11564 [Drosophila ananassae]
 gi|190621639|gb|EDV37163.1| GF11564 [Drosophila ananassae]
          Length = 1112

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 216/804 (26%), Positives = 366/804 (45%), Gaps = 82/804 (10%)

Query: 5   YFKQGKVEQFRQILEEGSSPEI--DEYYADVRYERIAILNALGVYYTYLGKIETKQREKE 62
           Y+  G+ E F Q+LE   S  +     Y D           L   Y  L    T+Q  KE
Sbjct: 41  YYSNGQFENFVQVLEAAISRCLKSSSSYRD----------DLARAYAVLVAGTTRQAYKE 90

Query: 63  ---EHFILATQYYNKASRID----MHEPSTWVGKG-QLLLAKGEVEQASSAFKIVLEADR 114
                 +L  +  N    +D    + E +  V KG   +L      +A   F  VL    
Sbjct: 91  LGNRRAVLMAKLTNIFRVLDGMQRVQERTVLVTKGYAFMLTAVRAAEADGLFVNVLRQSS 150

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
            NV AL+G+ C+ + R  Y  +L F+K  L   P  PG +R+ I  C  K+G++  AR+ 
Sbjct: 151 SNVLALIGRGCLAYARHDYLAALGFFKSVLMHQPRGPGDVRVAIAHCFLKMGEMDSARRC 210

Query: 175 FQRALQLDPENVEALVALAVMDL-QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
           F+ AL+ +  +  AL+ +A++ L Q N+   + + +  +  AFE+     + L  LA+H+
Sbjct: 211 FELALENNGRSQNALLGMALLKLNQCNKDTHV-EAINLLCAAFELNHRHPVVLGILASHY 269

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
           ++ G H  V  L   A  +T+    +S +   +ARS+H+   ++KA  +Y  SVK    P
Sbjct: 270 YYAGDHEQVWSLAGNAYLLTDIPQLQSENCLLIARSFHATRQFDKAKEFYALSVKL--AP 327

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIEKA 350
             ++    GL Q+ L+ G+   A    E +L++ P     L  L  IY+     GQ+++A
Sbjct: 328 EGYVLSQLGLAQMYLRRGERNEAKGCLETLLKVLPKEHTGLVLLSKIYLAERAAGQVDQA 387

Query: 351 QELLRKA--AKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLN 407
            E+L K   + +  +D   ++ L          G A+D+++ A  + +K+G EVP+E +N
Sbjct: 388 VEMLGKVVESPLGRQDCNCWLALAFGYEHKGLWGQAIDSYQKAMAICEKSGREVPVEWVN 447

Query: 408 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 467
           N+          + A  +  +AL                                  R +
Sbjct: 448 NLAATQQLAKMPQQALATIDEALA---------------------------------RSD 474

Query: 468 NDGN-HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKA 526
             G+ H +   N +T+ FN  R+LE +H    A + Y++IL +Y  Y D YLRL A+A  
Sbjct: 475 RAGDEHRQT--NLLTLRFNRCRILEDLHRCDLAEIAYKVILDEYPSYYDCYLRLGAMALR 532

Query: 527 RNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYAT 586
           +N + ++ E   + LKV+ +   A S LG   LK     +A   F         +DSY  
Sbjct: 533 QNKMSIATEYFKDVLKVDNENLPARSYLGSCYLKLGLASQAMYNFSVI------QDSYGL 586

Query: 587 LSLGNW---NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 643
           +++GN    +    L N  R       HLEKA + + + +  +  NL+A+NG GV L+ +
Sbjct: 587 VAMGNVCLHDLRKCLDNGDR--YYAKKHLEKALQFFKKALEHNPRNLWASNGIGVALSGR 644

Query: 644 GQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT 703
                ++  F Q+ EA       + P   +N AH   A+G +  A + Y+ CL +F  + 
Sbjct: 645 EFSSEAEATFQQIVEAGR-----ECPPAILNFAHTALAKGQYKQASQTYKQCLEEFLPHN 699

Query: 704 DAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRT 763
             + ++ LA++ Y   + ++ K  LL+A H+AP N  + ++ G+A++  S    Q  R  
Sbjct: 700 CVETIVPLAKSLYMEGKAREAKMWLLKARHVAPENPVVMYNLGLAIKSDSELIFQAPRPE 759

Query: 764 ADEVRSTVAELENAVRVFSHLSAA 787
             E+     EL+ +   F +LS +
Sbjct: 760 LTELVRAELELKVSYSYFDYLSTS 783


>gi|194884950|ref|XP_001976359.1| GG22832 [Drosophila erecta]
 gi|190659546|gb|EDV56759.1| GG22832 [Drosophila erecta]
          Length = 910

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 199/731 (27%), Positives = 339/731 (46%), Gaps = 57/731 (7%)

Query: 67  LATQYYNKASRIDMHEPSTW-VGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPALLGQA 124
           +A  Y+++   +   E +   V KG L +L+    + A + F  VL+    N+ AL+G+A
Sbjct: 73  MAINYFDQLDSLGEQEDAHLQVTKGYLWMLSSSRAQDADALFIRVLQKQPRNILALVGRA 132

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           C+ +N   Y+ +L ++K  L V P     +R+GIG C   +G+L KAR +FQ AL+ + +
Sbjct: 133 CLAYNHQDYTGALGYFKSVLIVQPQGLVDVRVGIGHCFRMMGELEKARVSFQAALEYNAQ 192

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
              A + LA++ L         +G + +  AF+   +    L+ LA+  +  G H +V  
Sbjct: 193 CQNAFLGLALLKLNQRGEDSYLEGKKLLVAAFDQNKHNPDVLSILASLSYLEGNHEMVRD 252

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
           L   +L  T++   +S +Y  +A+SYH+ G  E A  YY+ SVK    P  ++ PY G+ 
Sbjct: 253 LAGNSLRSTDNKQIESQNYLQIAKSYHATGQLEAAKKYYVLSVKV--APEGYVLPYVGMA 310

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLRKAAKID 361
           Q+ L  G+   A    E  L+  P+     + L +IY++    GQI+KA E+L K  +  
Sbjct: 311 QMYLNEGEINRAKACLEAFLKHEPEEPLVWRLLANIYLEERSPGQIDKAIEMLVKVVE-S 369

Query: 362 PRDAQAFIDLGELLISSDT----GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
               +AF     L  + +       A++A++ A ++    G  +PIE LNN+        
Sbjct: 370 ASCREAFHSWLSLAFAYEQKRLWAQAVNAYQKAISIYSGEGHHIPIEWLNNLANSQLMAK 429

Query: 418 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
             E A  +  DAL          SK +T                       +G H     
Sbjct: 430 MPEQALDTLDDAL----------SKCRTL----------------------NGEHKTT-- 455

Query: 478 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
           N +++ +N   +LE++H    A   Y+ IL  Y  Y D YLRL  +A  +N L  +IE  
Sbjct: 456 NLLSLHYNRGLVLEELHRFDLAVENYKSILKSYPTYYDCYLRLGVMAMQKNELTQAIEYF 515

Query: 538 NEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF 595
            + L  +     A + +GD    L  D +         AS  ++ KD+Y ++++GN+   
Sbjct: 516 KDVLNEDNSSLAARAYMGDCFNRLSLDKYATFNYNMILASQ-SNVKDTYVSMAMGNF-CL 573

Query: 596 AALRNEKRAPKLEATHLEKAKELY--TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
             L++        A   ++ K LY    V+  +  NL+AANG G VL+          +F
Sbjct: 574 KKLQSWMAGGNFGAARRQQGKALYFFGMVLDGNPRNLWAANGIGAVLSSYKNLSAGAAIF 633

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            Q+ E+ +      +P + +N AH+   +G + LA++ Y+ CL++F       ++ YLA+
Sbjct: 634 KQIIESGNKC----LPAI-LNSAHIALERGQYRLAIQTYERCLKEFLPKNCVAVMHYLAK 688

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 773
             Y+    +  KK LL+   L P +  + F+  + ++K +   L   R   DE++S   +
Sbjct: 689 ALYDEGDTRQAKKWLLKIRLLVPQDPFVLFNLALTIKKEADQALALPRPQLDELKSIQDQ 748

Query: 774 LENAVRVFSHL 784
           L  A   F HL
Sbjct: 749 LNVAYNFFYHL 759


>gi|195057475|ref|XP_001995265.1| GH22725 [Drosophila grimshawi]
 gi|193899471|gb|EDV98337.1| GH22725 [Drosophila grimshawi]
          Length = 1238

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 180/676 (26%), Positives = 325/676 (48%), Gaps = 53/676 (7%)

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           L+L +  +++AS+ F   L      V ALLG AC+ ++RG Y  +L ++K  L   P   
Sbjct: 44  LILIELRLDEASNHFVTALRQVPHCVQALLGLACLAYSRGEYKMALGYFKSVLLHRPQGS 103

Query: 152 GA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 210
            A +R+GI  C  +LG L +AR+AF+ AL+ +  ++ AL+ +A + L   +    ++G+ 
Sbjct: 104 MADVRVGIAHCFVQLGDLDRARRAFELALEHNGHSINALIGIAQLKLNQRQPNSTKEGVN 163

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
            ++ AFE  P+  + L +L+ H ++ G +  ++ L   A  +T+    +S   + LAR +
Sbjct: 164 LLREAFEQNPHHPLVLTWLSAHCYYEGNYEKLQLLAGNAYRITDDPLIQSQDCFQLARCF 223

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
           H+  +Y+ A  +Y  S+ E   PH +    +G+ Q+ ++ GD        + VL   P  
Sbjct: 224 HAMKNYDLAFNFYGKSLNEY--PHSYAPTEFGIAQIYVRRGDLVRGEELLKSVLNKLPQQ 281

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDP-RDAQAFIDLGELLISSDTG-AALDAFK 388
            + L+ L   Y Q G+ E A EL+  A    P  D   ++ L ++         +L A++
Sbjct: 282 PQALRMLATFYSQSGKFEAAVELINIALMHSPTNDYDIWLGLADIYERKQLWQQSLHAYE 341

Query: 389 TARTL---LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
            A+ +   L ++  +VP+   NNI  + F   + + A Q+                    
Sbjct: 342 KAKYIYQGLSESPRDVPLTWRNNIAALQFYANQSKEALQTL------------------- 382

Query: 446 YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
                +A M   +D            H E   N +T+ FN AR+LE++     A  +Y+ 
Sbjct: 383 -----NAVMPVTQD-----------EHCES--NMLTLKFNRARILEELRQDEQAENIYKQ 424

Query: 506 ILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 565
           ++ +Y +Y D+YLRL A+A  RN +  ++E  N  L+ +     A  +LG    K    +
Sbjct: 425 LMREYPNYTDSYLRLGAMAYKRNKIDTALEFFNAVLQRDEHNKAARKLLGICYCKQGSVL 484

Query: 566 KAKETFRAASDATDGK-DSYATLSLGNWNYFAALRNEKRA-PKLEATHLEKAKELYTRVI 623
            A   + A       + DS   +S GN     A  +  R  P+    ++E A +L+ + +
Sbjct: 485 HALNHYNAIRRQPQHQHDSEILVSQGNVLLIQAQEDIARGQPEESRRNVENALQLFRKAL 544

Query: 624 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 683
            Q+  NL+A NG  V L   G     + +F  +   ++     +  D  +N+AH+   Q 
Sbjct: 545 EQNQCNLWATNGIAVSLTLNGHLADGEKMFELIVNTSN-----RCTDAILNIAHIALEQQ 599

Query: 684 NFALAMKMYQNCLRKFYYNTD-AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLR 742
            +A A++MY+  L++     +  Q++ YLAR+ Y+  ++++ +  L+RA H+AP N TL 
Sbjct: 600 QYAKAIEMYRKYLQEDLLPVNKVQVMQYLARSLYQGGRFEEARDVLIRARHVAPQNRTLL 659

Query: 743 FDAGVAMQKFSASTLQ 758
           ++  VAM++ S S  +
Sbjct: 660 YNLAVAMKQHSQSVFE 675


>gi|195124165|ref|XP_002006564.1| GI18511 [Drosophila mojavensis]
 gi|193911632|gb|EDW10499.1| GI18511 [Drosophila mojavensis]
          Length = 1455

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 178/710 (25%), Positives = 337/710 (47%), Gaps = 63/710 (8%)

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           LLL  G + +A + F   L     NVPALLG  C+ +NR  Y  +L ++K  L  HP  P
Sbjct: 116 LLLVDGCLPEAETLFVSALRQSPYNVPALLGLGCLAYNRQEYRAALGYFKSVLSHHPDGP 175

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
             +R+GIG C  K+G L +AR+AF+ A++ +   + AL+  A + L   +        + 
Sbjct: 176 ADVRMGIGHCFLKMGDLDRARRAFELAVESNERCINALIGFAQLKLNERQREANMDATKL 235

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
           +   FE+     + L +L+ H ++T  +  +      A  +T+    K+ + Y++ARS+H
Sbjct: 236 LCTVFELNNRHPVVLTWLSCHLYYTRNYEKLRTAAGNAFLITDDPDLKAQNCYHIARSFH 295

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
           +  DY++A  +Y  +VK   +P+ F  P+ G+ Q+ ++ G    A  +   +L++ P+N 
Sbjct: 296 ATKDYDRAFDFYGKAVK--YQPN-FSPPHLGVAQIYVRRGQLYLAELSLRTLLKLMPENK 352

Query: 332 ETLKALGHIYVQLGQ---IEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDT-GAALDA 386
           E L+ LG IY Q  +   +++A +L + A     R D   ++ LGE          A+DA
Sbjct: 353 EALRMLGAIYTQSAEPTKLDRAVQLFQSALDHGGREDCDTWLALGEAYERKQQWQPAIDA 412

Query: 387 FKTARTLLKKA---GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 443
           ++ A ++ ++     +++P+  LNN+  +    G  E+A             L  LD   
Sbjct: 413 YEEAISIYQRTHGQDKDIPLPWLNNLAALQQHAGLPEAA-------------LITLD--- 456

Query: 444 KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 503
                            +       + N      N +TV FN AR+LE +   + A   Y
Sbjct: 457 -----------------KAIRELPKNPNSEHSESNLLTVRFNRARVLEDLGLVIQAENSY 499

Query: 504 RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD 563
           + ++ +Y +Y D+YLRL  +A   N   +++   +  L++   +  A + LG+L  ++  
Sbjct: 500 KQLIIEYPNYYDSYLRLGVMANKCNKAVMAVHYFSAVLRLEADHIVARTFLGNLYARHGA 559

Query: 564 WVKAKETF-----RAASDATDGKDSYATLSLGNWNYFAALR---NEKRAPKLEATHLEKA 615
             +A  ++     R A+ A     S   +++GN       R   N++    L+  + + A
Sbjct: 560 LSQAMCSYSLIMRRQANAAV----SSTLVAVGNVCLLKGTRATANDETDMALQ--YKQNA 613

Query: 616 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
            +L+ + + Q+  NL+AANG GV +        ++ ++ QV E++S        +  +NL
Sbjct: 614 LQLFCKALEQNKRNLWAANGLGVAMCHLSHLTAAETIYKQVVESSS-----LCSNAILNL 668

Query: 676 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 735
           AHV     +++ ++++Y+ CL+        + +  +A   Y++EQ+ + K  L +A   A
Sbjct: 669 AHVAMDLKHYSDSVEIYRKCLKDVLPANSVKEMQMIASALYQSEQFDEAKLILCQARRAA 728

Query: 736 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS 785
           P +  + F+ G+ +++   ST    +    E++     +  A+R F +LS
Sbjct: 729 PHDPNIIFNLGLVIKQAIRSTFDTIQTDLTELQKAEQNISIALRFFQYLS 778


>gi|74149130|dbj|BAE22373.1| unnamed protein product [Mus musculus]
          Length = 445

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/371 (36%), Positives = 213/371 (57%), Gaps = 18/371 (4%)

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE 558
           A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A S++G+L 
Sbjct: 6   AEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLH 65

Query: 559 LKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKE 617
           L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E  H ++A  
Sbjct: 66  LAKQEWGPGQKKFERILKQPATQSDTYSMLALGN-VWLQTLHQPTRDREKEKRHQDRALA 124

Query: 618 LYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
           +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + DVW+NLAH
Sbjct: 125 IYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATAD-----ISDVWLNLAH 179

Query: 678 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS 737
           +Y  Q  +  A++MY+NCLRKFY + + +I+LYLAR  ++  + Q+CK++LL+A H+APS
Sbjct: 180 IYVEQKQYISAVQMYENCLRKFYKHQNTEIVLYLARALFKCGKLQECKQTLLKARHVAPS 239

Query: 738 NYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDE 797
           +  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +     FD 
Sbjct: 240 DTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD--KMRFDL 297

Query: 798 KKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKA 848
               +    C  LL  A+ H   A +++++ R       Q +E  RQ  L E+   R + 
Sbjct: 298 ALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLRE 357

Query: 849 EEQKKYLLEKR 859
           +E++K LLE+R
Sbjct: 358 KEEQKKLLEQR 368


>gi|24659141|ref|NP_611764.1| CG9899 [Drosophila melanogaster]
 gi|21626595|gb|AAF46964.2| CG9899 [Drosophila melanogaster]
          Length = 922

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 203/799 (25%), Positives = 365/799 (45%), Gaps = 68/799 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           E++  GK   F+ I+E+G +  +  Y     Y+R  +  A  +  TYL     K  +   
Sbjct: 14  EFYAIGKGADFKAIIEKGIASCMTTYST---YDR-ELYKAYALLATYLSNHAFKIIKSRP 69

Query: 64  HF-ILATQYYNKASRI-DMHEPSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPAL 120
            F  +A   +++   +   H+P   V KG L +L+    + A +    VL     N+ AL
Sbjct: 70  AFQAMAINCFDQLDSLRQQHDPHLQVTKGFLWMLSSSRAQDADALLISVLRNHPKNILAL 129

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           +G+AC+ +NR  Y  +L ++K  L + P     + +GIG C +K+G+L KA+ +FQ AL+
Sbjct: 130 IGRACLAYNRQDYIGALGYFKSVLLIQPQGMADVWVGIGHCFWKMGELEKAQLSFQIALE 189

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            + + + A +ALA++  + N+    + G   +  A++        L+ LA  ++  G H 
Sbjct: 190 HNGQCLNAALALALVKFEHNDEQSYQDGKMLLTAAYKENNKNPDLLSILAGMYYADGNHK 249

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           LV      A+  T +   +S +Y+ +A+SYH+ G +E A  YY+ S K  + P  +I P 
Sbjct: 250 LVWSFAGNAIKFTANKHIESRNYFQIAKSYHATGQFESAKKYYLLSAK--SAPDGYILPL 307

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKAQELLRKA 357
            G+ Q+ L  G+   +    E  L   PD    +  L  IY++     +I+KA E+L K 
Sbjct: 308 VGVAQMYLHEGELNRSKAFLESFLTSEPDEPVVMDLLAKIYLEYKCPEKIDKAIEMLVKV 367

Query: 358 AKIDP--RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
            +     ++  ++++L          A  ++A++ A  +    G ++PIE LNN+     
Sbjct: 368 VESASYHQNTNSWLNLAFAYEQKRLWAHGVNAYQKAIDIYLSQGHQIPIEWLNNLASSQL 427

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 474
                E A  +  DAL       +++S  KT                             
Sbjct: 428 MAKMPEKALNTLDDALSK---CRVMNSDNKTT---------------------------- 456

Query: 475 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
              N +++ +N   +LE++H    A+  Y+ I  +Y  Y D YLRL  +A  +NN   +I
Sbjct: 457 ---NLLSLQYNRGLVLEELHMFTLAAENYKSITKEYSSYHDCYLRLGVMAIQKNNHTQAI 513

Query: 535 ELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW 592
           E + + L  +     A + +GD    L  D +         A   +   ++Y ++++GN+
Sbjct: 514 EHLKDILVEDNLNMTARTYMGDCFKGLSLDKFATFNYNMILARQ-SKFTNTYVSMAMGNF 572

Query: 593 ------NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 646
                 N+ A   N + A K +    EKA + + +++  +  NL+AANG G VL+     
Sbjct: 573 CLEKLQNWIAE-GNFRAARKQQ----EKALQCFGKILDCNPKNLWAANGIGAVLSSCNNL 627

Query: 647 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 706
                +F Q+ E  +  +    P + IN AH+    G + LA++ Y+ CL+         
Sbjct: 628 SAGGAIFKQIIECGNKCI----PAI-INSAHIALVSGQYRLAIQTYERCLKDHLPKNRVD 682

Query: 707 ILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADE 766
           ++  LA+  Y+    +  K  LL+  HL P +  + F+ G+A++K +   L   R   DE
Sbjct: 683 VMHCLAKALYDNGDARKAKMWLLKVRHLVPHDPFVIFNLGLAIKKETEQALALPRPQLDE 742

Query: 767 VRSTVAELENAVRVFSHLS 785
           +      L+ A ++F H++
Sbjct: 743 LMGLDGLLKVAFKLFCHIN 761


>gi|384080883|dbj|BAM11104.1| Paf1/RNA polymerase II complex component, homolog, partial
           [Siebenrockiella crassicollis]
          Length = 326

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 184/306 (60%), Gaps = 3/306 (0%)

Query: 37  RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAK 96
           ++  L+ L  YY    + E  +  K+E    AT  Y  A +I M++ +  +G+    L +
Sbjct: 1   QMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMADKIIMYDQNHLLGRACFCLLE 60

Query: 97  GE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +L +YK+AL+ +P CP  +R
Sbjct: 61  GDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRTNPGCPAEVR 120

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
           LG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++L   EA  I+ G++ + RA
Sbjct: 121 LGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRA 180

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
           + I P   M LN+LANHFFF   +  V+ L   A   T     ++ S Y LARS+H + D
Sbjct: 181 YTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTEVEAMQAESCYQLARSFHVQED 240

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
           Y++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K
Sbjct: 241 YDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMK 298

Query: 336 ALGHIY 341
            LG +Y
Sbjct: 299 ILGSLY 304


>gi|40216175|gb|AAR82829.1| AT20558p [Drosophila melanogaster]
          Length = 876

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 210/851 (24%), Positives = 382/851 (44%), Gaps = 72/851 (8%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           E++  GK   F+ I+E+G +  +  Y     Y+R  +  A  +  TYL     K  +   
Sbjct: 14  EFYAIGKGADFKAIIEKGIASCMTTYST---YDR-ELYKAYALLATYLSNHAFKIIKSRP 69

Query: 64  HF-ILATQYYNKASRI-DMHEPSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPAL 120
            F  +A   +++   +   H+P   V KG L +L+    + A +    VL     N+ AL
Sbjct: 70  AFQAMAINCFDQLDSLRQQHDPHLQVTKGFLWMLSSSRAQDADALLISVLRNHPKNILAL 129

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           +G+AC+ +NR  Y  +L ++K  L + P     + +GIG C +K+G+L KA+ +FQ AL+
Sbjct: 130 IGRACLAYNRQDYIGALGYFKSVLLIQPQGMADVWVGIGHCFWKMGELEKAQLSFQIALE 189

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            + + + A +ALA++  + N+    + G   +  A++        L+ LA  ++  G H 
Sbjct: 190 HNGQCLNAALALALVKFEHNDEQSYQDGKMLLTAAYKENNKNPDLLSILAGMYYADGNHK 249

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           LV      A+  T +   +S +Y+ +A+SYH+ G +E A  YY+ S K  + P  +I P 
Sbjct: 250 LVWSFAGNAIKFTANKHIESRNYFQIAKSYHATGQFESAKKYYLLSAK--SAPEGYILPL 307

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKAQELLRKA 357
            G+ Q+ L  G+   +    E  L   P+    +  L  IY++     +I+KA E+L K 
Sbjct: 308 VGVAQMYLHEGELNRSKAFLESFLTSEPNEPVVMDLLAKIYLEYKCPEKIDKAIEMLVKV 367

Query: 358 AKIDP--RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
            +     ++  ++++L          A  ++A++ A  +    G ++PIE LNN+     
Sbjct: 368 VESASYHQNTNSWLNLAFAYEQKRLWAHGVNAYQKAIDIYLSQGHQIPIEWLNNLASSQL 427

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 474
                E A  +  DAL       +++S  KT                             
Sbjct: 428 MAKMPEKALNTLDDALSK---CRVMNSDNKTT---------------------------- 456

Query: 475 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
              N +++ +N   +LE++H    A+  Y+ I  +Y  Y D YLRL  +A  +NN   +I
Sbjct: 457 ---NLLSLQYNRGLVLEELHMFTLAAENYKSITKEYSSYHDCYLRLGVMAIQKNNHTQAI 513

Query: 535 ELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW 592
           E + + L  +     A + +GD    L  D +         A   +   ++Y ++++GN+
Sbjct: 514 EHLKDILVEDNLNMTARTYMGDCFKGLSLDKFATFNYNMILARQ-SKFTNTYVSMAMGNF 572

Query: 593 ------NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 646
                 N+ A   N + A K +    EKA + + +++  +  NL+AANG G VL+     
Sbjct: 573 CLEKLQNWIAE-GNFRAARKQQ----EKALQCFGKILDCNPKNLWAANGIGAVLSSCNNL 627

Query: 647 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 706
                +F Q+ E  +  +    P + IN AH+    G + LA++ Y+ CL+         
Sbjct: 628 SAGGAIFKQIIECGNKCI----PAI-INSAHIALVSGQYRLAIQTYERCLKDHLPKNRVD 682

Query: 707 ILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADE 766
           ++  LA+  Y+    +  K  LL+  HL P +  + F+ G+A++K +   L   R   DE
Sbjct: 683 VMHCLAKALYDNGDARKAKMWLLKVRHLVPHDPFVIFNLGLAIKKETEQALALPRPQLDE 742

Query: 767 VRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQ 826
           +      L+ A ++F H+    NL+      +    + E C++L+    + +  A     
Sbjct: 743 LMGLDGLLKVAFKLFCHI----NLNHPKISVRVSAKYAEDCQNLMTELIVKKRQASESHA 798

Query: 827 QNRQRQEAARQ 837
               R +  +Q
Sbjct: 799 MEEDRVQLQKQ 809


>gi|195346992|ref|XP_002040038.1| GM15990 [Drosophila sechellia]
 gi|194135387|gb|EDW56903.1| GM15990 [Drosophila sechellia]
          Length = 913

 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 242/990 (24%), Positives = 427/990 (43%), Gaps = 116/990 (11%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           +++  GK   F+ ILE+G +  I +Y     YE+  +  A  +  TYL     +  +   
Sbjct: 14  QFYAIGKGADFKAILEKGIATCIAQYST---YEQ-ELYKAYSLLATYLSNHAFRVVKSRP 69

Query: 64  HF-ILATQYYNKASRIDMHE-PSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPAL 120
            F  +A    ++   +   E P   V KG L +L+    + A + F  VL     N+ AL
Sbjct: 70  AFQAMAINCIDQLDSLRQPEDPHLQVTKGFLWMLSSSRAQDADALFISVLRKQPKNILAL 129

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           +G+AC+ +NR  Y  +L ++K  L +       + +GIG C +K+G+  KAR +FQ AL+
Sbjct: 130 IGRACLAYNRQDYIGALGYFKSVLLIQSKGMADVWVGIGHCFWKMGERKKARVSFQIALE 189

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
              + + A + LA++    N+    ++G   +  A+         L+ LA  ++  G H 
Sbjct: 190 -HGQCLNARLGLALIKFDQNDEQSHQEGKMLLAEAYNEDNRNPELLSILAGMYYTDGNHK 248

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           +V      A+  T +   +S +Y+ +A+SYH+   +E A  YY+ + K    P  +I P 
Sbjct: 249 MVWSFAGNAIKFTANKHIESRNYFQIAKSYHATDQFESAKKYYLLAAKA--APEGYILPL 306

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLRKA 357
            G+ Q+ L  G+   A    E  L   PD    +  L  IY++      I++A E+L K 
Sbjct: 307 VGMAQMYLNDGELSKAKGCLESFLMFEPDEPVVMDLLAKIYIEEKCPENIDEAIEMLVKV 366

Query: 358 AKIDP--RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
            +     ++  ++++L          A  ++A++ A  +    G ++PIE LNN+     
Sbjct: 367 VESASYRQNINSWLNLAFAYEQKRLWAQVVNAYQKAIDIYLSRGHQIPIEWLNNLANSQL 426

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 474
                E A  +  +AL       +L+S+ KT                             
Sbjct: 427 MAKMPERALDTLDEALSK---CRVLNSEHKTT---------------------------- 455

Query: 475 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
              N +++ +N   +LE++H    A   Y  I  +Y  Y D YLRLA I+   N    +I
Sbjct: 456 ---NLLSLQYNRGLVLEELHMFTQAVDNYIAITKEYPSYHDCYLRLAVISIQMNKHTQAI 512

Query: 535 ELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW 592
           E + + L  +     A + +GD    L  D +         A   ++  ++YA++++GN+
Sbjct: 513 EHLKDILVEDNLNMTARTYMGDCFKGLSLDKFATFNYNMILAR-PSNFTNTYASMAMGNF 571

Query: 593 ------NY-----FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 641
                 N+     F A R +K          EKA + + +V+  +  NL+AANG G VL+
Sbjct: 572 CLEKLQNWLAEGNFRAARKQK----------EKALQCFAKVLDCNPKNLWAANGIGAVLS 621

Query: 642 EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 701
              +      +F Q+ E  +  +    P + IN AH+    G + LA++ Y+ CL+    
Sbjct: 622 SCYKLSAGGAIFQQITEGGNKCI----PAI-INSAHIALVSGQYRLAIQTYERCLKNHLP 676

Query: 702 NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTR 761
                ++ YLA+  Y     +  K  LL+  HL P +  + F+ G+ ++K +   L   R
Sbjct: 677 KNSVDVMHYLAKALYNNGDTRMAKMWLLKVRHLVPQDPHVIFNLGLVIKKEAEDVLALPR 736

Query: 762 RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAA 821
              DE+      L+ A  +F H+    NL+      +    + E C++L++        A
Sbjct: 737 PQLDELMGLDGMLKMAFNLFHHV----NLNHPKISVRLSAMYAEDCQNLINELVAKTIKA 792

Query: 822 EREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQ 881
              +  +  R +  R+       R +  E+ K+  + ++ E+E+ R   Q+   ++V E+
Sbjct: 793 RESQASDEDRIKVQRE-------RIRDHEKHKHQQQLQREEEERVRRENQKIQRKKVLER 845

Query: 882 WRS--STPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSR--SHYETEYAEADMMD 937
            R   S P +               SE  ++  GK R K+KS+R  S  +T   +AD   
Sbjct: 846 TRKIISAPLA---------------SEMPKKSAGKGRAKNKSNRRSSKKKTGKRDADKKQ 890

Query: 938 YREEPEDEDASMNYREPIGQMNDQDDDVEE 967
              EP  +  S  +        D DDD  E
Sbjct: 891 EDIEPLKKPKSKEFI-------DTDDDNSE 913


>gi|298705742|emb|CBJ49050.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1233

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 239/420 (56%), Gaps = 25/420 (5%)

Query: 480  VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
            V+++FNLA L E+     AA  L++ +L ++  YV++YLRL  +A+    +  + +   +
Sbjct: 700  VSMVFNLALLHEKQGHHEAAQELHKAVLAEHPTYVNSYLRLGIMARDSGQIHEASKWFKQ 759

Query: 540  ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLSLGNWNYFAAL 598
            AL+V+G+ PN ++ +G+L ++N +W  A++ F    +    + DSYA LSLGN  YF+ L
Sbjct: 760  ALEVDGENPNIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNI-YFSNL 818

Query: 599  RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
             +  +  K    HL  A   Y  V+ +  +N ++ANG G+VLAEKG  D +KD+F +V+E
Sbjct: 819  EDRTKYEK----HLLHAANFYHEVLKKDDANAFSANGLGMVLAEKGTLDHAKDVFARVRE 874

Query: 659  AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
             ++      + DVWINLAHVY AQ     A+++YQNCL+KF+   D  + +YLA  +++A
Sbjct: 875  VSAEV----LGDVWINLAHVYLAQNKHNEAIRLYQNCLKKFHGGRDPSLHIYLAHAYFDA 930

Query: 719  EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTR----RTADEVRSTVAEL 774
             Q+ DC + LL+A+H++P+N  L ++  +A + F+ + LQK +    RT  EV + + +L
Sbjct: 931  RQYNDCMRVLLKALHVSPNNLQLWYNLALARETFAVAVLQKEQKGEARTLAEVENAIEDL 990

Query: 775  ENAVRVFSHLSAASNLHLHG-----FDEKKINTHVEYCKHLLDAAKIH--REAAEREEQQ 827
            + A ++FS L         G     +D  K   H ++C   ++ A  H   E  + ++QQ
Sbjct: 991  KGATKLFSWLKDCKPDKTGGVRHLPYDASKAEKHAKFCFDNIERAAQHLNHEKMKADQQQ 1050

Query: 828  N-RQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSST 886
               +R + A +  + +  + + E++++     R+ E E+ +L+Q      +++E W + T
Sbjct: 1051 EVHERHQRALEKMVQQRKQEEEEQRRRQETHARERE-ERAKLKQAS--LDKLQESWTTQT 1107



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 141/246 (57%), Gaps = 14/246 (5%)

Query: 4   EYFKQGKVEQFRQILEE---GSSPEIDEYYADVR----YERIAILNALGVYYTYLGKIET 56
           EY++QG  E FR IL E     +P+ + +YAD R      RI ILNAL           +
Sbjct: 61  EYYRQGSEEHFRGILNEIIEALTPDTERFYADDRRAFDVGRIRILNALAADSVKQASKCS 120

Query: 57  KQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN 116
            +  +++ +  A  +   A RID     TWVGKG   L +GE+++A   F+   +  R N
Sbjct: 121 DRSARDDGYTTALSHLTSADRIDNMSELTWVGKGVFYLCQGELDRAKYFFENARK-QRHN 179

Query: 117 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 176
            PA LG+A V F+ G Y  +L+ Y  A++V+P C  ++R+G+GLC YKLGQ+ +A+ A  
Sbjct: 180 FPATLGEAAVNFHHGNYKQALDLYSEAIRVNPECSASVRVGLGLCCYKLGQISRAQAAMT 239

Query: 177 RALQLDPENVEALVALAVMDLQANEAA---GIRK---GMEKMQRAFEIYPYCAMALNYLA 230
           RALQLDP+NV+ALV  A+++L    A     +R+    +  +  A+ +    AM LN+LA
Sbjct: 240 RALQLDPQNVQALVGSAILELSTASAGSQDAVRRTENAINTISMAYHVDAKNAMVLNHLA 299

Query: 231 NHFFFT 236
           NH+F+T
Sbjct: 300 NHYFWT 305



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 19/215 (8%)

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
            FT  +  V +L  TA   T+    K+ S Y  AR +H+ G+  +A L Y  +       
Sbjct: 374 LFTKDYRKVVELASTAYENTSAPEIKAESCYLKARVHHATGNLSEAKLLYNEACHLWP-- 431

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
            +F    YG+ Q+ +  G    A+     VL   PDN E L  LG +  +      A   
Sbjct: 432 -QFPLAQYGMAQMLVNEGSIDPAMKALNAVLAEVPDNQEALVLLGVLCAKNKDRLPALSK 490

Query: 354 LRKAAKIDPRDAQAFIDLGELL----------ISS------DTGAALDAFKTARTLLKKA 397
            ++A +++PR + A+I   ++L          +SS      D GA          L  ++
Sbjct: 491 FKRALELNPRLSDAWIAQAQVLQEDPADHKLALSSYLKGLGDGGATSTGTTFPEGLSDRS 550

Query: 398 GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 432
           G +       NI V+H   G    A  +++ A  +
Sbjct: 551 GSQTRQAAWTNIAVLHEHIGNAADAMTAYRHAFSE 585



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 63/121 (52%), Gaps = 7/121 (5%)

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
           Y  +G+ ++A  ++  + K+ +      FP   G   V    G+++ AL  + + + + P
Sbjct: 157 YLCQGELDRAKYFFENARKQRHN-----FPATLGEAAVNFHHGNYKQALDLYSEAIRVNP 211

Query: 329 DNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 387
           +   +++  LG    +LGQI +AQ  + +A ++DP++ QA +    L +S+ +  + DA 
Sbjct: 212 ECSASVRVGLGLCCYKLGQISRAQAAMTRALQLDPQNVQALVGSAILELSTASAGSQDAV 271

Query: 388 K 388
           +
Sbjct: 272 R 272


>gi|349605498|gb|AEQ00714.1| RNA polymerase-associated protein CTR9-like protein-like protein,
           partial [Equus caballus]
          Length = 364

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/353 (36%), Positives = 203/353 (57%), Gaps = 18/353 (5%)

Query: 517 YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAAS 575
           YLRLAA+A+ + N   + +   EAL++N  +P+A S++G+L L   +W   ++ F R   
Sbjct: 1   YLRLAAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILK 60

Query: 576 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 635
             +   D+Y+ L+LGN  +   L    R  + E  H ++A  +Y +V+     NLYAANG
Sbjct: 61  QPSTQSDTYSMLALGN-VWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANG 119

Query: 636 AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 695
            G VLA KG F  ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NC
Sbjct: 120 IGAVLAHKGYFREARDVFAQVREATAD-----ISDVWLNLAHIYVEQKQYISAVQMYENC 174

Query: 696 LRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAS 755
           LRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S
Sbjct: 175 LRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATS 234

Query: 756 TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAK 815
            L+  +    EV + V ELE A R FS+LS   +     FD     T    C  LL  A+
Sbjct: 235 VLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD--KMRFDLALAATEARQCSDLLSQAQ 292

Query: 816 IHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
            H   A +++++ R       Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 293 YHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 345


>gi|195585946|ref|XP_002082739.1| GD11743 [Drosophila simulans]
 gi|194194748|gb|EDX08324.1| GD11743 [Drosophila simulans]
          Length = 924

 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 198/804 (24%), Positives = 355/804 (44%), Gaps = 79/804 (9%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           +++  GK   F+ ILE+G +  +  Y     YE+  +  A  +  TYL     +  +   
Sbjct: 14  QFYAIGKGADFKAILEKGIATCMAPYST---YEQ-ELYTAYSLLATYLTNHAFRVVKSRP 69

Query: 64  HF-ILATQYYNKASRIDMHE-PSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPAL 120
            F  +A   +++   +   E P   V KG L +L+    + A + F  VL     N+ AL
Sbjct: 70  AFQAMAINCFDQLESLRQQEDPHLQVTKGFLWMLSSSRAQDADALFISVLRKQPKNILAL 129

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           +G+AC+ +NR  Y  +L ++K  L +       + +GIG C +K+G+  KAR +F+ AL+
Sbjct: 130 IGRACLAYNRQDYIGALGYFKSVLLIQSKGMADVWVGIGHCFWKMGEREKARVSFKIALE 189

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
              + + A + LA+++   N+    ++G   +  A+         L+ LA  ++  G H 
Sbjct: 190 -HGQCLNATLGLALINFDQNDEQSYQEGKMLLAEAYTEDNRNPELLSILAGMYYTDGNHK 248

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           +V  L   A+  T +   +S +Y+ +A+SYH+   +E A  YY+ + K    P  +I P 
Sbjct: 249 MVWSLAGNAINFTANKHIESRNYFQIAKSYHATDQFESAKKYYLLAAKA--APEGYILPL 306

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLRKA 357
            G+ Q+ L  G+   A    E  L   PD    +  L  IY++      I++A E+L   
Sbjct: 307 VGMAQMYLNDGELSKAKGCLESFLMFEPDEPVVMDLLAKIYIEEKCTENIDEAIEMLVNV 366

Query: 358 AKIDP--RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
            +     ++  ++++L          A  ++A++ A  +    G ++PIE LNN+     
Sbjct: 367 VESASYRQNINSWLNLAFAYEQKRLWAQVVNAYQKAMDIYLSRGHQIPIEWLNNLANSQL 426

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 474
                E A  +  +AL       +L+S+ KT                             
Sbjct: 427 MAKMPERALDTLDEALSK---CRVLNSEHKTT---------------------------- 455

Query: 475 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
              N +++ +N   +LE++H    A   Y  I  +Y  Y D YLRLA +A   N    +I
Sbjct: 456 ---NLLSLQYNRGLVLEELHMFTQAVDNYMAITKEYPSYHDCYLRLAVMAIQMNKHTQAI 512

Query: 535 ELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW 592
           E + + L  +     A + +GD    L  D +             ++  D+YA++++GN+
Sbjct: 513 EHLKDILVEDNLNMTARTYMGDCFKRLSLDKFATFNYNMILVR-PSNFTDTYASMAMGNF 571

Query: 593 ------NY-----FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 641
                 N+     F A R +K          EKA + + +V+  +  NL+AANG G VL+
Sbjct: 572 CLEKLQNWLAEGNFRAARKQK----------EKALQCFAKVLDCNPKNLWAANGIGAVLS 621

Query: 642 EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 701
              +      +F Q+ E  +  +    P + IN AH+    G + LA++ Y+ CL+    
Sbjct: 622 SCYKLSAGGAIFQQIIEGGNKCI----PAI-INSAHIALVSGQYRLAIQTYERCLKNHLP 676

Query: 702 NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTR 761
                ++ YLA+  Y     +  K  LL+  HL P +  + F+ G+ ++K +   L   R
Sbjct: 677 KNSVDVMHYLAKALYNNGDTRMAKMWLLKVRHLVPQDPHVIFNLGLVIKKEAEDALALPR 736

Query: 762 RTADEVRSTVAELENAVRVFSHLS 785
              D++      L+ A  +F H++
Sbjct: 737 PQLDDLMGLDGMLKMAFNLFQHVN 760


>gi|3789905|gb|AAC67538.1| developmental protein DG1071 [Dictyostelium discoideum]
          Length = 581

 Score =  198 bits (503), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 221/391 (56%), Gaps = 15/391 (3%)

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           +T  +NLARL E +     A  LY+ I+ ++ +Y D YLRL+ I K + +   + E + E
Sbjct: 4   ITSTYNLARLYETMGQVNKAEELYKGIIKEHPNYYDCYLRLSCICKQQGDYYEAGEWIRE 63

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKD-SYATLSLGNWNYFAAL 598
            L +      A ++ G+L L  ++W  A++ F   ++  D K+ +YA+LSLGN  Y A  
Sbjct: 64  VLDIQPDNQEAWALYGNLHLYKEEWYPAQKNFEQITENPDNKNETYASLSLGNIYYNAKF 123

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
            N  +  K    ++  A++ Y RV+ ++ +N+YAANG G+++AEKG  +++ + F Q++E
Sbjct: 124 SNPDKVEK----YILNAEQFYNRVLTKNPTNIYAANGIGMIIAEKGNLNLAGETFLQIRE 179

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ-ILLYLARTHYE 717
           A+   + V      +NLAH+Y ++G F  A+K+Y+ CL+K     + + I++YLA+ +++
Sbjct: 180 ASMDCIPVS-----VNLAHIYVSKGLFDNAIKLYEGCLKKSTSPKEIETIIMYLAKVYFD 234

Query: 718 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 777
           A ++ D K++L +AIH+ P N ++ F+  ++++  +   L+K ++ A E  + + ELE A
Sbjct: 235 ANRFYDSKQTLKKAIHMYPHNLSIHFNLAISIEMQATIFLEKHQKNATETFNIIKELEFA 294

Query: 778 VRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQ 837
            R+ + L+   +     F   K  TH    + +L + +   E+  + E    +++EAA +
Sbjct: 295 QRLLTPLANTKSTPKLNFSPSKAKTHQTSIEKILVSLRTEHESIVKIEADLSKKREAAFE 354

Query: 838 AA--LAEEARRKAEEQKKYLLEKRKLEDEQK 866
               L EE R +  E K+ L E  KLE E+K
Sbjct: 355 EVKRLEEEKRIRDLELKQQLEE--KLEAERK 383


>gi|281203357|gb|EFA77557.1| RNA polymerase II complex component [Polysphondylium pallidum
           PN500]
          Length = 710

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 141/447 (31%), Positives = 241/447 (53%), Gaps = 33/447 (7%)

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           +T  +NL RL E +++   A  LY  IL ++ +Y+D Y+R+A++ +A  N   +IE + E
Sbjct: 205 ITTTYNLGRLYESMNNFSRARDLYVGILGEHPNYLDCYMRIASVCRAEGNDFEAIEWIKE 264

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 599
           AL V+     A S+ G L L  + W  A+  F    D +   D YA+L+LGN  + A  +
Sbjct: 265 ALNVDPNNAEAWSLYGSLHLSKEQWNFAQRKFEQIIDLSKT-DPYASLALGNLYFQAKNQ 323

Query: 600 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA 659
           N +R  K    +L  A+  YT+ +  + +N+YAANG G+V  EKG   ++ ++F Q++EA
Sbjct: 324 NPERYDK----YLTLAETYYTKTLRNNPNNIYAANGLGMVAFEKGNLHLATEIFVQLREA 379

Query: 660 ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ----ILLYLARTH 715
           A     + +  V +NLAHVY  +  F  A+++Y+ CL+K    +DA+    I LYL++  
Sbjct: 380 A-----IDVQSVSLNLAHVYMEKKLFDFAIRLYEGCLKKC---SDAKELELIYLYLSKAL 431

Query: 716 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 775
           +EA+++ +CK+ L +AIH++P+N  L F+  + ++K++A  +   ++T  +  +   E  
Sbjct: 432 FEAQRYSECKQILKKAIHISPANMVLWFNLALTIEKYAAMFIHTAKKTLFDYSNLQKETA 491

Query: 776 NAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE--EQQNRQRQE 833
            A  +   +S + N  L GFD KK  TH++    L    KI  E    E  E +N +++E
Sbjct: 492 YARHLLMSISNSKNTKL-GFDVKKCKTHLQSLDEL--QKKIGDEVKNLEIIELENSKKRE 548

Query: 834 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRE 893
            A Q ++ +   R+ EE ++    + KLE+E++   +Q + F        S    SK  E
Sbjct: 549 IALQESIKKAEEREREEHERKAALQAKLEEEERLAAKQAKEF--------SDLLKSKEEE 600

Query: 894 RSENDDDEVGHSEKRRRKGGKRRKKDK 920
           +S   DDE   S ++ +K   R   D+
Sbjct: 601 KS---DDEQPVSSRKNKKNKDRNASDE 624



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 167/383 (43%), Gaps = 78/383 (20%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EY+KQ  + +F +IL +   PE+++ Y+D +  RIA+LN+L  YYT  G  E  +  +++
Sbjct: 49  EYYKQDMINEFIEILNQVLEPEVEKLYSDSKLGRIAMLNSLASYYTQAGSQERDKIRRDD 108

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-ADRDN------ 116
           +F  AT ++NKA +ID H   TWVG   LLL++G++E A + F  VL  A +D       
Sbjct: 109 YFNKATFHFNKAQKIDSHISLTWVGIAVLLLSRGDMEHAETHFLNVLNLASKDPQSIFLP 168

Query: 117 -VPALLGQACV----------------------------EFNRGRYSDSLEFYKRA---- 143
            +PA LGQ  +                             +N GR  +S+  + RA    
Sbjct: 169 VLPAQLGQGLLAEAEQIYLEVIQDSGFTLEDYKSVNITTTYNLGRLYESMNNFSRARDLY 228

Query: 144 ---LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 200
              L  HP+          +CR + G   +A +  + AL +DP N EA      + L   
Sbjct: 229 VGILGEHPNYLDCYMRIASVCRAE-GNDFEAIEWIKEALNVDPNNAEAWSLYGSLHLSKE 287

Query: 201 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
           +    ++  E++    +  PY ++AL  L    +F  +               N  P + 
Sbjct: 288 QWNFAQRKFEQIIDLSKTDPYASLALGNL----YFQAK---------------NQNPERY 328

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
             Y  LA +Y++K            +++  N P+  I+   GLG V  + G+   A   F
Sbjct: 329 DKYLTLAETYYTK------------TLR--NNPNN-IYAANGLGMVAFEKGNLHLATEIF 373

Query: 321 EKVLEIYPDNCETLKALGHIYVQ 343
            ++ E   D       L H+Y++
Sbjct: 374 VQLREAAIDVQSVSLNLAHVYME 396


>gi|331238707|ref|XP_003332008.1| hypothetical protein PGTG_13960 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309310998|gb|EFP87589.1| hypothetical protein PGTG_13960 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1107

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 231/943 (24%), Positives = 393/943 (41%), Gaps = 152/943 (16%)

Query: 54   IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
            I   Q   +E    A  Y N+ASRID   P     +  L LA+   +QA +A + +L+  
Sbjct: 122  IPPAQPTADETLEKAAHYINEASRIDSRNPLVLDARATLYLAQKHYDQALTACEEILKER 181

Query: 114  RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
              ++PALLG+A V F+R  +  +L+ Y++ L++ P      R+GIG C + LG    ARQ
Sbjct: 182  PTHLPALLGKARVLFHRKFFRPALKLYQQVLKLAPHVLPDPRIGIGSCFWFLGDQKLARQ 241

Query: 174  AFQRALQLDPENVE--ALVALAVMDLQAN---------EAAGIRKGMEKMQRAFEIYPYC 222
            A++R+L ++P      A + L +   QA+         + A  +K +  +Q  F++    
Sbjct: 242  AWERSLVVNPGKASQGARLLLGLSHFQASKDIHLPDEAQFAAYQKAISDVQAVFKMDRNN 301

Query: 223  AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
            A A   LA+H           ++ E A+   N   T   +   LAR++H++G   +A   
Sbjct: 302  AAAAAVLASHLLTANNWTTATKMAERAVQYANTASTAVEARLVLARAFHAQGKLNEAMRE 361

Query: 283  YMASVKEINKPHE--FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
            Y A+      P E   +    G+ Q+ +   +F  A+  FE V+   P   E L  L  +
Sbjct: 362  YRAAA-----PPERSVLTSILGVAQILVARNEFGIAINMFENVVRRQPRCIEALANLAAL 416

Query: 341  YVQLG-----------QIEKAQELLRKAAKI------------------DPR------DA 365
               L            +  KA+EL  +  ++                   PR      D 
Sbjct: 417  RTHLAFTSSSSTEASSEKTKAKELHEQITRLFATRVKNHSMKPDDEGMMPPRIREVASDP 476

Query: 366  QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
              +I++  L   +D   +L A++ + T+ +  G+ +P  +LNNIGV+ ++ G    A + 
Sbjct: 477  DLYIEIARLSSDTDINRSLKAYRQSLTVREDLGKPIPAMLLNNIGVLEWKNGHLTEAQER 536

Query: 426  FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK---VTV 482
             + AL                   A+AS +              G+  E   N+   V +
Sbjct: 537  IESALA------------------ATASAVV-------------GDETEREINERTAVCM 565

Query: 483  LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
            LFNL  + EQ  D   A  +Y  IL ++ +YVDA  RLA +  A  N   +  L+ EAL 
Sbjct: 566  LFNLGVICEQAKDKAKAKDIYERILLRHPEYVDAKARLALMYLAEKNYDKTNALLKEALT 625

Query: 543  V---NGKYPNALSMLGDLELKNDDWVKAKETFRAAS-DATDGKDSYATLSLGNWNYFAAL 598
                NG+    L  L    L   + +K    F  A+    D  D YA  + G   Y  A 
Sbjct: 626  SQTGNGE----LRALYTYFLIESNQIKQARDFTVATLKDHDKSDVYALCASGALLYTQAR 681

Query: 599  RNEKRAPKLE---ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE------------- 642
             N+   P+     A+   ++ E + + +       +AA G  + LAE             
Sbjct: 682  ENKAIGPEASLDRASKFFRSTEFFEKALQLDPQCAFAAQGLAIALAEHVISPSNVNAPSS 741

Query: 643  KGQF--DVSK----------DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAM 689
             G F  D S            + T+V+EA + GSV+V       NL H ++ +  F  A+
Sbjct: 742  NGAFAPDASNVRAKNLRDSITILTKVREAHNDGSVYV-------NLGHCHYLRDEFDRAI 794

Query: 690  KMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA-------PSNYTLR 742
            + Y    ++FY + +  +LLYLAR  Y+         +L  A+          P +  + 
Sbjct: 795  ENYFTASKRFYDDKNVLVLLYLARAWYQKASKDRSFAALRSALTFVQTAKEHHPKDGAIA 854

Query: 743  FDAGVAMQKF--SASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKI 800
            F+  +  QK       L  ++RT  E+++ +A+ + A   F  L A+       FD    
Sbjct: 855  FNLALVQQKGLELLVDLPPSKRTLAEIKTAIADAQLAQEAFGEL-ASKPAGTVPFDIDIA 913

Query: 801  NTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRK 860
            +    Y + LL      R +   E Q+  +  E A+     E AR++ E +++ L E  +
Sbjct: 914  HQRKRYGESLL-----RRTSELSESQEAYESSEIAK----IERARQERENERQRLAEAER 964

Query: 861  LEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVG 903
            L  E+  +  + E   R +++ + S      ++ + +++ E G
Sbjct: 965  LRLEE--IAAKNEELTRKRQEMQESVATWYIKQANSDNESEDG 1005


>gi|219109906|ref|XP_002176706.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411241|gb|EEC51169.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1346

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 294/1253 (23%), Positives = 496/1253 (39%), Gaps = 275/1253 (21%)

Query: 34   RYERIAILNALGVYY--------TYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 85
            + ER+ IL A G+ +           G    +    +E    A Q + +A +ID   P T
Sbjct: 117  KTERVRILAATGIAHLSSNGAADATSGNTAKRSNVLDEARQQADQKFTQAGKIDPFFPMT 176

Query: 86   WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
            W+G+G L L +G+ +QA+  F+  L+     +PALLG A V F +G Y+ +   Y +AL+
Sbjct: 177  WIGRGMLNLWQGKHDQATFFFQTTLKQCGPVLPALLGTAAVSFAQGDYTAAQTAYGQALR 236

Query: 146  VHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE--- 201
             +P   GA  R+G GL  Y LGQ+ +A+ AF+RA  +DPENVEA+V  A++D+ + +   
Sbjct: 237  KYPHASGAASRVGFGLASYALGQVDRAKAAFRRATAIDPENVEAMVGTAILDMASVDVSD 296

Query: 202  ---AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF----------------------- 235
               AA + + +  M  A  +    AM  N+LANH+F+                       
Sbjct: 297  KDYAAKMEEAIRVMSMANLLNHENAMVQNHLANHYFWKWTPVNGTVEVTKGSQLVQMPSQ 356

Query: 236  -----TGQHFLVEQLTETALA-VTNHGPTKSHSYYNLARSYHS---------KGDYEKA- 279
                  G+   +    ET +  V +     + S + +  S+           K DY++  
Sbjct: 357  AVPLEPGERIRIGTKFETTVQDVEDDSNNNTASTFTVTDSWSEGSATGLKVWKKDYDRVI 416

Query: 280  ------------------GLYYMASVKEINKPHEFIFPYY---------------GLGQV 306
                               L+++A V  +    +    +Y               GL Q 
Sbjct: 417  ALAKGAYGSTNVQSMQAESLFFLARVYHVRGETDHALKFYEKACKLAPALTPARFGLAQT 476

Query: 307  QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG-QIEKAQELLRKAAKIDPRDA 365
             +   D+ +A    ++VL    +  + L  LG +  + G Q+E+    LRKA ++DP + 
Sbjct: 477  LIVKEDYSAAKKQLQQVLATASNATDALALLGLLEARSGKQVEEGLMHLRKATELDPLNT 536

Query: 366  QAFIDLGELL--ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA- 422
               +     L    ++   +L+ +K A  L+++   +V  E+  N GV+  E    + A 
Sbjct: 537  DLVVLEAMALQKYENNNVKSLERYKKALLLMERKTTKVSYEIYANCGVLCHELKRHDEAL 596

Query: 423  -----------HQSFKDA----LGDG---------------------IWLTLLDSKTKTY 446
                          FK A    L DG                     + + +LD  +KT+
Sbjct: 597  DMYRRALAVLDEDGFKGAAVFQLADGPERGRIRHVDNAMFNAFVNSNLLVEVLDRHSKTF 656

Query: 447  V-------IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 499
            V        D +  + +   + L   FE     V        ++  LA   + + DT + 
Sbjct: 657  VKVLDVLEADVAGILSKGDRVSLGDGFET--KVVSWESRDGAIVLELADEYDPM-DTDSK 713

Query: 500  SVLYRLI----LFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
                 ++    L    + +     +A + +A      +IE+    LK N  Y N+   L 
Sbjct: 714  KAPLLVVRENNLLSIPEAITVAFNIARLHEATGRTVAAIEIHKAILKRNPAYVNSYLRLA 773

Query: 556  DLELKNDDWVKAKETFRAASDATDGKDSYAT------LSLGNW----NYFAALRNEKRAP 605
             + +      +  E  + A+    G     T      LSL +W    + F  L + K+ P
Sbjct: 774  CIAVDCGSLKEGSEWLKIAASTAPGNPEVLTLVGNLHLSLCDWAPAQSVFDGLLS-KKIP 832

Query: 606  KLEA-----------------------THLEKAKELYTRVIVQHTSNLYAANGAGVVLAE 642
             ++A                        HL+ A + Y R++ +  +N YAANG G VLAE
Sbjct: 833  NVDAYASLSLGNIYFANLHVNEDKRYDKHLQYAADYYRRILAKDPANAYAANGIGTVLAE 892

Query: 643  KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYN 702
            K +   +K++F +V+E +  S+    PD  +NL H++ AQ     A++MY N +++    
Sbjct: 893  KAEIFKAKEVFNRVREVSGDSI----PDALLNLGHIFLAQKKHPEALQMYTNYMKRTEDG 948

Query: 703  TD-----------AQILLYLARTHYE----AEQWQDCK--------KSLLRAIHLA---P 736
            T              +LLY+A   ++     E   D          +  ++ ++LA    
Sbjct: 949  TTPTTAKSRVDDVVSVLLYIAFAFFDWARHTELANDSSAAPADGRYREAMQHLNLAIGKG 1008

Query: 737  SNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSH-LSAASNLHLH 793
            S   L     + M K  A+   LQK  R    +  +V E+E A+R           +   
Sbjct: 1009 SKQDLVLKYNLCMTKLQAANCVLQKLTRN---IPRSVEEVEEALRGLEESFQIVEQIVKD 1065

Query: 794  GFDEKKINTH-------VEYCKHLLDAAKIH----REAAEREEQQNRQRQEAARQAALAE 842
              D KK+N         V++CK  + +A+ H    R+ A+  E +   R+ AA +A + E
Sbjct: 1066 KADGKKVNISSTTLQDFVKHCKANILSAQSHLEDERKRAKEAEVEREIRRLAAEEATIKE 1125

Query: 843  EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWR--SSTPASKRRERSENDDD 900
              R        + L++ K +  + +++Q EE    ++  WR    T  S++ +R+    D
Sbjct: 1126 RLRMDQAAMDAHKLQEEKDQKAEAKMKQVEE----LQSNWREEKETKQSEKEKRARGRKD 1181

Query: 901  EVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQM-- 958
            E+   E      G   + D    ++    + ++D     ++ E  D+  N  + IG +  
Sbjct: 1182 EMTADEV-----GLVVEDDNHQATNGHGLFDDSD-----DDSEIVDSLPNETKGIGGLEK 1231

Query: 959  ---------NDQDDDVEENANDRLAAAGLE-------------DSDVDD-EMAPSITAAR 995
                      D DDD   N  DR      +             DSD DD E+A   T   
Sbjct: 1232 STSSTKDLFGDSDDDQSGNDEDRKGTVKPDATKAAITSMDLFGDSDEDDIEVAYGAT--- 1288

Query: 996  RRRALSESDDDEP--FERQLRDNTDELQDSDGELRENDHK---SNGGAALDDD 1043
              +  SE    EP      L  +TDE  DSD E   N  K    +G A LDDD
Sbjct: 1289 --KPTSEESKKEPPATSNDLFGDTDE--DSDAEPSTNSAKRPNESGIAELDDD 1337


>gi|414585832|tpg|DAA36403.1| TPA: hypothetical protein ZEAMMB73_637393, partial [Zea mays]
          Length = 184

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 90/134 (67%), Positives = 110/134 (82%), Gaps = 3/134 (2%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           + REYFKQGK+EQFRQILEEGS PEIDEYYADV+YERIAIL ALG ++T+LGK++ +  +
Sbjct: 46  IAREYFKQGKIEQFRQILEEGSGPEIDEYYADVKYERIAILTALGAFHTFLGKVD-RAPQ 104

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           KE HF  ATQYYN+ASRID  EPSTW+G+GQL +AKGE++ AS +FKIVL+ D +N PAL
Sbjct: 105 KESHFKDATQYYNRASRIDETEPSTWIGRGQLCIAKGELQMASDSFKIVLDEDENNFPAL 164

Query: 121 LGQACVEFNRGRYS 134
           LGQ  V F   R+S
Sbjct: 165 LGQ--VIFRLFRWS 176


>gi|331224468|ref|XP_003324906.1| hypothetical protein PGTG_06443 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309303896|gb|EFP80487.1| hypothetical protein PGTG_06443 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1095

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 230/931 (24%), Positives = 391/931 (41%), Gaps = 140/931 (15%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
           I   Q   +E    A  Y N+ASRID   P     +  L LA+   +QA +A + +L+  
Sbjct: 122 IPPAQPTADETLEKAAHYINEASRIDSRNPLVLDARATLYLAQKNYDQALTACEEILKER 181

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
             ++PALLG+A V F+R  +  +L+ Y++ L++ P      R+GIG C + LG    ARQ
Sbjct: 182 PTHLPALLGKARVLFHRKFFRPALKLYQQVLKLAPHVLPDPRIGIGSCFWFLGDQKLARQ 241

Query: 174 AFQRALQLDPENVE--ALVALAVMDLQAN---------EAAGIRKGMEKMQRAFEIYPYC 222
           A++R+L ++P      A + L +   QA+         + A  +K +  +Q  F++    
Sbjct: 242 AWERSLVVNPGKASQGARLLLGLSHFQASKDIHLPDEAQFAAYQKAISDVQAVFKMDRNN 301

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
           A A   LA+H           ++ E A+   N   T   +   LAR++H++G   +A   
Sbjct: 302 AAAAAVLASHLLTANNWTTATKMAERAVQYANTASTAVEARLVLARAFHAQGKLNEAMRE 361

Query: 283 YMASVKEINKPHE--FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           Y A+      P E   +    G+ Q+ +   +F  A+  FE V+   P   E L  L  +
Sbjct: 362 YRAAA-----PPERSVLTSILGVAQILVARNEFGIAINMFENVVRRQPRCIEALANLAAL 416

Query: 341 YVQLG-----------QIEKAQELLRKAAKI------------------DPR------DA 365
              L            +  KA+EL  +  ++                   PR      D 
Sbjct: 417 RTHLAFTSSSSTEASSEKTKAKELHEQITRLFATRVKNHSMKPDDEGMMPPRIREVASDP 476

Query: 366 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
             +I++  L   +D   +L A++ + T+ +  G+ +P  +LNNIGV+ ++ G    A + 
Sbjct: 477 DLYIEIARLSSDTDINRSLKAYRQSLTVREDLGKPIPAMLLNNIGVLEWKNGHLTEAQER 536

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK---VTV 482
            + AL                   A+AS +              G+  E   N+   V +
Sbjct: 537 IESALA------------------ATASAVV-------------GDETEREINERTAVCM 565

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           LFNL  + EQ  D   A  +Y  IL ++ +YVDA  RLA +  +  N   +  L+ EAL 
Sbjct: 566 LFNLGVICEQAKDKAKAKDIYERILLRHPEYVDAKARLALMYLSEKNYDKTNALLKEALT 625

Query: 543 V---NGKYPNALSMLGDLELKNDDWVKAKETFRAAS-DATDGKDSYATLSLGNWNYFAAL 598
               NG+    L  L    L   + +K    F  A+    D  D YA  + G   Y  A 
Sbjct: 626 SQTGNGE----LRALYTYFLIESNQIKQARDFTVATLKDHDKSDVYALCASGALLYTQAR 681

Query: 599 RNEKRAPK--LEATHLE-----------KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ 645
            N+   P+  L+   L+            A  L   VI     N  ++NGA    A   +
Sbjct: 682 ENKAIGPEASLDRATLQLDPQCAFAAQGLAIALAEHVISPSNVNAPSSNGAFAPDASNVR 741

Query: 646 FDVSKD---LFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 701
               +D   + T+V+EA + GSV+V       NL H ++ +  F  A++ Y    ++FY 
Sbjct: 742 AKNLRDSITILTKVREAHNDGSVYV-------NLGHCHYLRDEFDRAIENYFTASKRFYD 794

Query: 702 NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA-------PSNYTLRFDAGVAMQKF-- 752
           + +  +LLYLAR  Y+         +L  A+          P +  + F+  +  QK   
Sbjct: 795 DKNVLVLLYLARAWYQKASKDRSFAALRSALTFVQTAKEHHPKDGAIAFNLALVQQKGLE 854

Query: 753 SASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLD 812
               L  ++RT  E+++ +A+ + A   F  L A+       FD    +    Y + LL 
Sbjct: 855 LLVDLPPSKRTLAEIKTAIADAQLAQEAFGEL-ASKPAGTVPFDIDIAHQRKRYGESLL- 912

Query: 813 AAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQE 872
                R +   E Q+  +  E A+     E AR++ E +++ L E  +L  E+  +  + 
Sbjct: 913 ----RRTSELSESQEAYESSEIAK----IERARQERENERQRLAEAERLRLEE--IAAKN 962

Query: 873 EHFQRVKEQWRSSTPASKRRERSENDDDEVG 903
           E   R +++ + S      ++ + +++ E G
Sbjct: 963 EELTRKRQEMQESVATWYIKQANSDNESEDG 993


>gi|159467375|ref|XP_001691867.1| Paf1 complex component [Chlamydomonas reinhardtii]
 gi|158278594|gb|EDP04357.1| Paf1 complex component [Chlamydomonas reinhardtii]
          Length = 973

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 193/731 (26%), Positives = 324/731 (44%), Gaps = 95/731 (12%)

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           E A +  N+G      +  LA  ++ +  Y+KA  +Y  +++E   P        G+   
Sbjct: 226 ERAASAKNNGRPNVVGHLALAGLHYQQQHYKKALQHYRTALREFPGPGCPAEVRLGIAAA 285

Query: 307 QLKLGDFRSALTNFEKVL--------------------------------------EIYP 328
             KLGD  +A   +++VL                                      ++ P
Sbjct: 286 SFKLGDLATAKAAYKRVLALDPDCADAYLGLALLAASDANVQQGLADCLRHLLTAYQLQP 345

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKA---AKIDPRDAQAFIDLGELLISSDTGAALD 385
            +   L  L H  + +GQ E+ + L R A   A+  P  A   +    + + +    A  
Sbjct: 346 GHVGVLTHLAHYCLLMGQPERGEVLARAALEGAEALPGSASEGVRAEAMTLLARAYHAQG 405

Query: 386 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG---------EFESAHQS---FKDAL--- 430
               AR    +A        L  +G+     G         E E A ++   F DAL   
Sbjct: 406 RMDEARAEYGRACALDKRSPLPRLGMAQMYCGAGQLINAATELEEALKAAPAFYDALKEA 465

Query: 431 -----GDG-IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 484
                GD  +W  L +    +   D +   +   D  +  R  N  N   L +    V  
Sbjct: 466 TGKQPGDAELWEMLGELLAPS---DPADEDVPLPDHVVPTRLLN--NAAVLHYRAGEVAT 520

Query: 485 NLARLLEQI--HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
            LA LL++    +  AA+ LY+ +L ++  Y+D YLRLA IA+A+ N + ++E    AL 
Sbjct: 521 ALA-LLQRAAGGEYKAAAALYKEVLSEHPTYIDCYLRLACIARAKGNHKEALEFAQSALD 579

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAAL--R 599
             G + +AL+++  L ++  D+  A +T  +   D+   +D+Y  +   N   + A   R
Sbjct: 580 KEGGHADALALMSQLYMERRDYEAAGKTLIQLIQDSGSKRDTYGRIGYANTYLYTAPKDR 639

Query: 600 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA 659
            E +  K EA    KA + Y  V+     N++AANG G  LAE G  D ++ +F++V  +
Sbjct: 640 KEDQLRKAEA-RFSKALDEYRAVLDADPRNVWAANGCGAALAELGYLDAAQSVFSEVYAS 698

Query: 660 -ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 718
            A    F+ +PDV INLA+   A+ ++  A+ +Y+  L K  +    Q+LLYLAR  Y++
Sbjct: 699 MALSDGFLTIPDVLINLANCNLARCDYQDAVHLYRTALDKLEHKHHPQVLLYLARALYDS 758

Query: 719 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEV------RSTVA 772
            +  + +  L RAIHLAP++Y LRF+  + +Q+++  T +K R   D        R+ V 
Sbjct: 759 NKLTEAQSCLKRAIHLAPTDYKLRFNYALTLQEWAVRTFRKERVAGDPTKLPDFQRAEVL 818

Query: 773 ELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQ 832
            L+ A R + HL         G D+ K+N HV +C   L   +   +AA +E+ + R R+
Sbjct: 819 -LKEAHRHYEHLKVLGR-ERSGLDDVKLNAHVSFCAAQLQKTQDLIDAAAKEDYEARLRR 876

Query: 833 EAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRR 892
               +   A EA R+AEE       +R+ E ++ R R+++E  +  +++W     A  + 
Sbjct: 877 HEQIKIREAAEADRQAEEL------RRQAEVDEAR-RRRDELARAAQDKW-----AGDKG 924

Query: 893 ERSENDDDEVG 903
            R     DEVG
Sbjct: 925 GRKSAGRDEVG 935



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 183/444 (41%), Gaps = 51/444 (11%)

Query: 6   FKQGKVEQFRQILEEGSSPE----IDEYYAD-VRYERIAILNALGVYYTYLGKIETKQRE 60
              G+++ F  I E  +S E    ++ Y+     YERI    A         + E +   
Sbjct: 120 LAHGRLDAFDHIYETATSEETAVEVERYFGQKPTYERIQFFTARAAILIAQFRDEKQADA 179

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K      A +    AS +D +E    +  G   +A+G++ QA+  ++    A  +  P +
Sbjct: 180 KALLLSEAKKLITTASSLDPNEQLVLLTSGLHHMARGDLTQAARDWERAASAKNNGRPNV 239

Query: 121 LGQ---ACVEFNRGRYSDSLEFYKRALQ--VHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           +G    A + + +  Y  +L+ Y+ AL+    P CP  +RLGI    +KLG L  A+ A+
Sbjct: 240 VGHLALAGLHYQQQHYKKALQHYRTALREFPGPGCPAEVRLGIAAASFKLGDLATAKAAY 299

Query: 176 QRALQLDPE-NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           +R L LDP+     L    +    AN   G+   +  +  A+++ P     L +LA++  
Sbjct: 300 KRVLALDPDCADAYLGLALLAASDANVQQGLADCLRHLLTAYQLQPGHVGVLTHLAHYCL 359

Query: 235 FTGQHFLVEQLTETALAVTNHGP------TKSHSYYNLARSYHSKGDYEKA-GLYYMASV 287
             GQ    E L   AL      P       ++ +   LAR+YH++G  ++A   Y  A  
Sbjct: 360 LMGQPERGEVLARAALEGAEALPGSASEGVRAEAMTLLARAYHAQGRMDEARAEYGRACA 419

Query: 288 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 347
            +   P     P  G+ Q+    G   +A T  E          E LKA    Y      
Sbjct: 420 LDKRSP----LPRLGMAQMYCGAGQLINAATELE----------EALKAAPAFY------ 459

Query: 348 EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN 407
               + L++A    P DA+ +  LGELL  SD          A   +      VP  +LN
Sbjct: 460 ----DALKEATGKQPGDAELWEMLGELLAPSD---------PADEDVPLPDHVVPTRLLN 506

Query: 408 NIGVIHFEKGEFESAHQSFKDALG 431
           N  V+H+  GE  +A    + A G
Sbjct: 507 NAAVLHYRAGEVATALALLQRAAG 530


>gi|444516600|gb|ELV11217.1| RNA polymerase-associated protein CTR9 like protein [Tupaia
           chinensis]
          Length = 978

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 212/426 (49%), Gaps = 78/426 (18%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           L +                              +RLG+G C  KL +L KAR AF RAL+
Sbjct: 167 LAE------------------------------VRLGMGHCFVKLNKLEKARLAFSRALE 196

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+ + V ALV LAV++L   E         K+Q              +LA H F   +  
Sbjct: 197 LNSKCVGALVGLAVLELNNKE------DYSKVQ--------------HLALHAFHNTE-- 234

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            VE +             ++ S Y LARS+H + DY++A  YY  + +  +    F+ P+
Sbjct: 235 -VEAM-------------QAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPF 278

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKA 357
           +GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K 
Sbjct: 279 FGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKV 338

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P D +A+I+L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  
Sbjct: 339 TEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRL 398

Query: 417 GEFESA 422
           G    A
Sbjct: 399 GNLGEA 404



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 183/396 (46%), Gaps = 66/396 (16%)

Query: 485 NLARLLEQIHDTVAASVLYRLILFK--YQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           +L ++ EQ  D V A +    IL +   Q  + AY     I + +    +  E++N    
Sbjct: 334 HLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGA 393

Query: 543 VNGK---------YPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNW 592
           ++ +         +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN 
Sbjct: 394 LHFRLGNLGEAKDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV 453

Query: 593 NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 652
            +   L    R  + E  H ++A  +Y +V+     NLYAANG G               
Sbjct: 454 -WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIG--------------- 497

Query: 653 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 712
                   S   +V                   ++    Y+NCLRKFY + + +++LYLA
Sbjct: 498 --------SYKTYV-------------------SIVPCKYENCLRKFYKHQNTEVVLYLA 530

Query: 713 RTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVA 772
           R  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V 
Sbjct: 531 RALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVK 590

Query: 773 ELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR--- 829
           ELE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R   
Sbjct: 591 ELELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELR 648

Query: 830 ----QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
               Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 649 AKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 684


>gi|345565881|gb|EGX48829.1| hypothetical protein AOL_s00079g468 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1161

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 219/880 (24%), Positives = 377/880 (42%), Gaps = 115/880 (13%)

Query: 112  ADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKA 171
            A+  N+ AL+G+A   F++ RY  +LE Y+  L+  P      R+GIGLC + L     A
Sbjct: 194  ANGSNMVALMGKARWLFSKARYDKALECYQEILRKKPDMDPDPRIGIGLCFWMLNFKDDA 253

Query: 172  RQAFQRALQLDPENVEALVALAVMDLQANEAAGI-----------RKGM-EKMQRAFEIY 219
            + A++RAL+LDP++  A + + +  L  N  +G+           +KGM E + +A+++ 
Sbjct: 254  KMAWERALELDPDSKVANLLVGIYYL--NFVSGLPESDPEFIKHYKKGMTEYIAKAYKLD 311

Query: 220  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
               A+A    A +FF  G     E L++ A+  T+       + Y L R Y   G+Y  +
Sbjct: 312  KNMALACTLFATYFFSVGNLATAESLSKKAIEFTDVPQVARDALYLLGRKYQEAGEYTLS 371

Query: 280  GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
               Y+ S  E  K   ++    G GQ+ +   D+  A   FE +L+ +    E +  LG 
Sbjct: 372  RQSYVRS--ENAKEDTYLPSKLGTGQLMVLQKDYTGAKLAFEGILKTFNKCLEAMMVLGT 429

Query: 340  IY--------VQLGQI--EKAQE---------LLRKAAKIDPRDAQ----AFIDLGELLI 376
            +Y         Q G I  EK +E          +R + K   ++ +      + L  L  
Sbjct: 430  LYAEEVFLAETQSGVIRDEKTEERKKAISYLETVRSSWKDTKKNMKPSVSVLLTLARLYE 489

Query: 377  SSDTGAALDAFKTARTLLKKAG-EEVPI---EVLNNIGVIHFEKGEFESAHQSFKDALGD 432
                  +L   +    L + A  EE P+   ++LNNI V ++  G+++ A +SF+ AL +
Sbjct: 490  VDSQDKSLACLQQVADLERAASTEEEPMLAPQLLNNIAVFNYNMGKWDEARESFQTALSN 549

Query: 433  GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 492
             + +   D    T   DA  +                           T+ +NLARL E 
Sbjct: 550  CVAMGAKDESLDT---DALVT---------------------------TLTYNLARLEEA 579

Query: 493  IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN------LQLSIELVNEALKVNGK 546
              +T  A   Y  +L ++ DY +A +RLA IA  R        L+  ++  +  L+V   
Sbjct: 580  AGNTDEAVKFYEGLLVRHADYTEAAMRLAYIALRRGGEEGPKRLEELMKTEDHNLEVCAL 639

Query: 547  YPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRA 604
            Y   LS        N    K +  ++      D  D Y+   +GN +   A  +R +   
Sbjct: 640  YGYYLSRRPKKSPLNIAEDKEQRHYKRTLTTHDKHDRYSLTGMGNLHLMTAREMRRDTDQ 699

Query: 605  PKLEATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASG 662
             K +   + E+A E + + +V    N YAA G  + + E K  +     +F +V+    G
Sbjct: 700  DKEKKRKMYERAVEFFDKALVLDPKNAYAAQGVAIAMIEDKKDYSTGVGIFEKVK----G 755

Query: 663  SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY------ 716
            +  ++   V INL H +     F  A++ Y+  + ++  + D   +  LAR  Y      
Sbjct: 756  T--LKEASVHINLGHSFVEIKQFTRAIENYEIAINQYRADRDPWTITSLARAWYLKGKVE 813

Query: 717  -EAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAE 773
                Q     +   +A+ L+P +    F+      +       L K +RT+DE+++++  
Sbjct: 814  KSLPQLNTALEHSKKALSLSPDHPIFMFNVAYLQSQIGQVVHELPKHQRTSDEIKASLDG 873

Query: 774  LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHRE-AAEREEQQNRQRQ 832
            +E A++ FS ++ + N      D   I   V   K+      I R+ AA+ EEQ   +  
Sbjct: 874  VEEAIKTFSAVAKSKNPPYPASD---IEVRVTMNKNT-----IRRQLAADLEEQLKYEEL 925

Query: 833  EAARQAALAEEARRKAEEQKKYLLEKRKLEDE----QKRLRQQEEHFQRVKEQWRSSTPA 888
             A++   +AE  R++  E  K   E  KLE E    QKRL ++    Q    +W+     
Sbjct: 926  HASK---IAEAKRKREAEITKRAEEHAKLEAEKAEKQKRLAEERRLMQEQAREWQDKREE 982

Query: 889  SKR-RERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYE 927
             +R R  + +D D  G+  KR R+  +  K+ +  R   E
Sbjct: 983  EERARMVAVDDYDSDGNKRKRTRREPREPKEPRQKRERSE 1022


>gi|403412951|emb|CCL99651.1| predicted protein [Fibroporia radiculosa]
          Length = 1096

 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 205/915 (22%), Positives = 395/915 (43%), Gaps = 142/915 (15%)

Query: 54  IETKQREKEEHFILATQYYNKASRI--DMHEPSTWVG---KGQLLLAKGEVEQASSAFKI 108
           + T +R ++EHF  A QY+N   ++  D  E  T +    +G L +    ++ A  +F  
Sbjct: 121 VMTTERSRDEHFKDAAQYFNSGEKLAADSGEVGTLLAVLTRGVLQMGTRAMDDALRSFDG 180

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
           VL     N  ALLG+A + + R +++ +L+ ++  L+++P+C    R+GIGLC + +   
Sbjct: 181 VLSQKPTNAVALLGKAKILYARRQFAQALKLFQTVLKLNPNCLPDPRIGIGLCLWAMDYK 240

Query: 169 GKARQAFQRALQLDPE--NVEALVALAVMDLQANEAAG-------IRKGMEKMQRAFEIY 219
            KA+ A+QR+ +++P   + + L+ L  ++   NE+         +  G   ++RAF   
Sbjct: 241 AKAKAAWQRSAEVNPNEWSPQLLLGLEAINSSRNESQTQEERKNELIVGTRYIERAFRAN 300

Query: 220 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
              + A N L   F   GQH +  +L E A+  T+     +  Y    R  H+ G   +A
Sbjct: 301 QRNSAAANALCELFLQKGQHKMALKLAERAIQFTDVKTILTDGYIRAGRVSHTVGSTVEA 360

Query: 280 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL-- 337
             Y+  + +   +P   +    GL Q+Q+K  +  +A+   + +L+        ++A+  
Sbjct: 361 SKYFTRARE--GQPTS-VLANIGLAQIQMKHDEIPAAIHTLDSLLQQNHGQQRPVEAMVM 417

Query: 338 -----GHIYVQLGQIEKAQELLR-----------------------KAAKIDPRDAQ--- 366
                 H  V +   ++A E LR                        + KI  R A+   
Sbjct: 418 LASLRAHPRVGMSSPDQAAERLRARDLFDQVFKALALSEDHHARVDSSPKISGRSARKIA 477

Query: 367 ----AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
                +I++  L    +      A K A  + + +G+  P  +LNN+ V+ + +G  E+A
Sbjct: 478 EDMDVYIEMARLWQGENLERMERALKEASRVCEASGKTDP-RLLNNLAVLQYLEGNLEAA 536

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
              ++ A+     +T LDS    ++++  ++                           T+
Sbjct: 537 RTMYETAITQ---VTTLDS----HIVEGLST---------------------------TM 562

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK--ARNNLQLSIELVNEA 540
           L+NLAR  E+  +   A   Y  +L ++ +YVDA LR A +    +RNN   + ELV +A
Sbjct: 563 LYNLARTYEEQGEETMAKEAYEKLLDRHPEYVDAKLRQAQMLSNVSRNN--EAHELVKQA 620

Query: 541 LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN 600
           L       N  +      +++ ++  AKE         D  D Y+  + G   Y  A  +
Sbjct: 621 LASQNNNLNLRAFYTYFLVQSHNFKPAKELVFTTLRDHDKHDIYSLCAAGWIQYHQARES 680

Query: 601 EKRAPK-LEATH--LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK------- 650
              +PK +E      +++ E Y + +        AA G  +V AE    ++         
Sbjct: 681 RDASPKGIEERRRGFQRSAEFYEKALHLDPMCAIAAQGLAIVTAEDALGNLGGSLAPTTQ 740

Query: 651 --------------DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 695
                         D+F +V+E+ + GSV+V       N+ H Y+A   F  A++ ++  
Sbjct: 741 DENHRRIKNAREALDIFAKVRESLNDGSVYV-------NMGHCYYACDEFDRAIESFETA 793

Query: 696 LRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI-------HLAPSNYTLRFDAGVA 748
            +++Y   +   LLYL R+ Y          ++  A+       HL P +    ++  + 
Sbjct: 794 SKRYYGGHNVPTLLYLCRSWYSKANKDQSFSAMCTALQYAQKAYHLHPFDKATLYNIAMI 853

Query: 749 MQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEY 806
            QK +   S++   +R+  +++  + +  NA ++F+ L AA    L  +     +   +Y
Sbjct: 854 QQKAAEMLSSVPPAKRSLKDLQRAIEQASNAQKLFASL-AADKSPLVPYSRDMADQRRKY 912

Query: 807 CKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQK 866
              +L     H  A    E++ + + EAARQ       +R+ E +++  LE++++E+ +K
Sbjct: 913 GDSVLRKCDEHLAAQRTWEEETQAKIEAARQ-------KRQHEREQQEALERQRVEELKK 965

Query: 867 RLRQQEEHFQRVKEQ 881
           + +   E  ++ +EQ
Sbjct: 966 QAQVLAEERRKAREQ 980


>gi|302853740|ref|XP_002958383.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f.
           nagariensis]
 gi|300256263|gb|EFJ40533.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f.
           nagariensis]
          Length = 1179

 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 213/441 (48%), Gaps = 43/441 (9%)

Query: 401 VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 460
           +P  +LNN  V+H+ + E                              D S++M   +  
Sbjct: 501 IPARLLNNAAVLHYRQVE----------------------------AGDVSSAMALLRRA 532

Query: 461 Q-LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
           Q    R  +    V    +  T+ FN ARL+E   +  AA+ LY+ +L ++  Y+D YLR
Sbjct: 533 QDAMSRGADGCGGVSSHMHLATLTFNRARLMEASGEYKAAAQLYKDVLSEHGTYIDCYLR 592

Query: 520 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDAT 578
           LA IA+A+ + + ++     AL V G + +AL+++  L ++  D+  A  T  +   D  
Sbjct: 593 LACIARAKGSHKEALRYAQSALDVEGGHADALALMSQLHMERRDYEAAGRTLIQLLQDDG 652

Query: 579 DGKDSYATLSLGNWNYFAALRN--EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 636
             +D Y  +   N   + A R+  E  A K EA    KA + Y  V+     N++AANG 
Sbjct: 653 SKRDVYGRIGYANTYLYTAPRDRREDSAKKAEA-RFSKALDEYRSVLEADPRNVWAANGC 711

Query: 637 GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
           G  LAE G  D ++ ++  +   A    F+ +PDV INLA+V+ A+ ++  A+ +Y+  L
Sbjct: 712 GAALAELGYLDAAQ-VYASM---ALSDGFLTIPDVLINLANVHLARCDYQDAVHLYRTAL 767

Query: 697 RKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST 756
            K  +    Q+LLYLAR  Y++ +  + +  L RAIHLAP++Y LRF+  + MQ+++  +
Sbjct: 768 DKLEHKHHPQVLLYLARALYDSNKLNEAQSCLKRAIHLAPTDYKLRFNYALTMQEWAVRS 827

Query: 757 LQKTRRTADEVRSTVAE-----LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLL 811
            +K R   D  +    +     L+ A R + HL         G DE K+  HV +C   L
Sbjct: 828 FRKERPPGDPTKLPDLQRAELLLKEAHRHYEHLKVLGR-ERSGLDEVKLTAHVSFCAAQL 886

Query: 812 DAAKIHREAAEREEQQNRQRQ 832
                  EAA +E+ + R R+
Sbjct: 887 RKTPDLLEAAAKEDYEARLRR 907



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 10/187 (5%)

Query: 3   REYFKQGKVEQFRQILEEGSSPE----IDEYYAD-VRYERIAILNALGVYYTYLGKIETK 57
           R Y +QG+++ F  I E  +S E    ++ Y+     YERI    A         + E  
Sbjct: 49  RAYLQQGRLDGFDLIYETATSEETAVEVERYFGQKPTYERILFFTAKAAVLIAQARDEKT 108

Query: 58  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK---IVLEADR 114
              K      A +   +A  +D +E    +  G   LA+G+++ AS  FK         R
Sbjct: 109 ADSKARLLSDARKLITQAGTLDQNEQLVHLSSGLHFLARGDLQNASRDFKRAATCRNNGR 168

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS--CPGAIRLGIGLCRYKLGQLGKAR 172
            NV   L  A + + + +Y +++ +Y+ AL+  P   CP  +RLGI  C +KLG L  AR
Sbjct: 169 ANVIGYLAVAGLAYQQQQYKEAMSYYRAALRDFPGSGCPAEVRLGIAACAFKLGDLATAR 228

Query: 173 QAFQRAL 179
            A++R L
Sbjct: 229 AAYRRGL 235



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 18/111 (16%)

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL------------- 344
            P  G+ Q     G   +A T  E+ L+  P   + LK LG +   L             
Sbjct: 262 LPRLGMAQTYCAAGQLVNAATELEEALKAAPAFYDALKILGQLLPALNRDGAGAPTRGSS 321

Query: 345 -----GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
                 ++     +L+ A    P DA  +  LGELL  +D   AL A+K A
Sbjct: 322 SADGSSRLAATVAMLKDATSKQPNDADMWEMLGELLAPTDPAGALAAYKKA 372


>gi|395332634|gb|EJF65012.1| RNA polymerase II-associated protein [Dichomitus squalens LYAD-421
           SS1]
          Length = 1094

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 204/905 (22%), Positives = 373/905 (41%), Gaps = 147/905 (16%)

Query: 58  QREKEEHFILATQYYNKASRI-----DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA 112
           +R +E+++   T Y+N   R+     + H   + + +G L L+ G+ + A+  F  VL  
Sbjct: 122 ERTREDYYKEGTMYFNSGERVAAEYGESHMMLSSLTRGILQLSSGQWDDAARTFDSVLSD 181

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
              NV ALLG+A + + R +Y+ SL+ ++R LQ++P+C    R+GIGLC + +    KA+
Sbjct: 182 KPTNVVALLGKAKIAYARRQYTQSLKLFQRVLQLNPTCLPDPRIGIGLCLWAMDHKAKAK 241

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAG---------IRKGMEKMQRAFEIYPYCA 223
            A+QR+++++P    A + L +  L A++  G            G   ++RAF      +
Sbjct: 242 AAWQRSVEVNPGEWSAHLLLGLEALNASKNEGQSEEERREEFLTGTRLIERAFNANQRNS 301

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A N L   F   GQ  +  +L E  +   +        Y    R  H +G  + A  ++
Sbjct: 302 AAANALCELFLQKGQTKMALKLAERTIQFADVKGILCDGYIRAGRVTHREGRLQDATSHF 361

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--YPDNCETLKALGHIY 341
               KE  K  + +    GL QVQLK  +   A+   +  L+    P + E +  L  I 
Sbjct: 362 -TKAKEARK--DSVLATIGLAQVQLKNDETAGAIHTLDTFLQTPQNPKSVELMAMLASIR 418

Query: 342 VQ----------------------------------LGQIEKAQELLRKAAKIDPRDAQA 367
                                               L Q+    + L  +A+    D + 
Sbjct: 419 ATSRPGMTDKDKVEEKARARDLFDRVCKFIGAGTDGLAQLNGQTQNLTPSARKLGEDTEM 478

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
           FI++ +L           A+K A    + +G   P  ++NN+G +   +G F+ A   ++
Sbjct: 479 FIEIAKLYQDESIERMERAYKQALQNSEASGRIEP-RLVNNLGALQHLEGHFDEARAMYE 537

Query: 428 DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLA 487
            AL            T    +D S +                           ++L+NLA
Sbjct: 538 TAL------------THAASLDQSTAEAM----------------------STSILYNLA 563

Query: 488 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 547
           R+ E+  D + A   Y  +L ++ +Y DA LR A +    N    + EL+ +AL      
Sbjct: 564 RVYEEQADVMKAKEAYDKLLTRHPEYADAKLRQAQMLAEMNQYNDAHELIKQALASQPNN 623

Query: 548 PNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRN---EKRA 604
            N  +      ++++    AK+         D  D Y+  + G   Y  A  N    +  
Sbjct: 624 LNLRAFYTHFLVQSNQAKYAKDFVFVTLRDHDKYDVYSLCAAGWLQYHQARENRDGSQEG 683

Query: 605 PKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK-------------- 650
            K      +++ E Y + +        AA G  +V+AE    ++                
Sbjct: 684 IKDRRRGFQRSAEFYEKALQLDPLCAVAAQGLAIVVAEDALGNLGGALGPPAPDENGKRL 743

Query: 651 -------DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYN 702
                  D+F +V+E+ + GSV+        N+ H ++A+  F  A++ Y+   ++FY+N
Sbjct: 744 KNSREALDIFAKVRESINDGSVYA-------NMGHCHYARDEFDKAIESYETASKRFYHN 796

Query: 703 TDAQILLYLARTHYEAEQWQDCKKSLL-------RAIHLAPSNYTLRFDAGVAMQKFSA- 754
            +   LL L R  Y          S+        +A+HL P +  + ++  +  QK +  
Sbjct: 797 KNVSALLCLCRAWYAKANKDQSFSSMTTALQYAQKALHLHPFDKAILYNIAMIQQKAAEL 856

Query: 755 -STLQKTRRTADEVRSTVAELENAVRVFSHLSA-ASNLHLHGFD------------EKKI 800
             ++   +R+  +++  + +  +A ++F+ L+A  S L  +  D             ++ 
Sbjct: 857 LMSVPPAKRSLKDLQKAIEQAGHAQKLFASLAADKSPLVPYNRDLADQRRKYGESMLRRC 916

Query: 801 NTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRK 860
             H+   K     A+   EAA +  Q+ ++RQ+AA +A L EE R++AE+    L E+R+
Sbjct: 917 EDHLATQKQWEADAQAKIEAARQRRQEEKERQDAAERARL-EELRKQAEK----LAEERR 971

Query: 861 LEDEQ 865
           +  EQ
Sbjct: 972 IAREQ 976


>gi|296418241|ref|XP_002838750.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634711|emb|CAZ82941.1| unnamed protein product [Tuber melanosporum]
          Length = 1181

 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 243/1024 (23%), Positives = 422/1024 (41%), Gaps = 178/1024 (17%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK----------- 53
            Y K  KV+   +I+ +G   +  E  A    ER+ +L+ L   Y    +           
Sbjct: 82   YAKHDKVDIAIEIITKGLQAKTHEPMA----ERLPMLHLLTWLYLERSREAAKNVAEGSA 137

Query: 54   IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV---------EQASS 104
            + ++ + K+ +  LATQ  N++SR+D       + +G   + K  V         + A+ 
Sbjct: 138  LISEAKTKDHYLQLATQILNESSRLDPASTLVTLARGVYSVFKASVGTVDKNTHMDNAAK 197

Query: 105  AFKIVLEADR-DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
             F   +   R  N+ A++G+A V + +GRY  +LE Y+  L   P      R+GIGLC +
Sbjct: 198  IFDDAVRTSRATNMLAIMGRARVLYGKGRYERALESYQEVLTKRPDMDPDPRIGIGLCCW 257

Query: 164  KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEKMQR 214
             LG    A  A++RAL+LDP +  A +  A+  L                 R  +E  Q+
Sbjct: 258  HLGHKDDALVAWERALELDPNSKYAHILKALYHLHVTSNLSEYDPEFINNYRLVIEHTQK 317

Query: 215  AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
            AF++     +A    A+HFF    +   E L + A+  ++     +  +++LAR  H +G
Sbjct: 318  AFKLDKQFPLACTTFASHFFIKKGYSQCELLAKKAIEYSDVAAVTADGWFSLARKAHVEG 377

Query: 275  DYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
            +YEKA  +Y    K  +   E   P   G+GQVQ+ + D  +A   FE ++++ P   E 
Sbjct: 378  EYEKALGHY----KRSDALREGYLPVKLGIGQVQILMKDLGAAKYTFEAIVQVNPKCIEA 433

Query: 334  LKALGHIYVQ--LGQI----------------EKAQELLR--------KAAKIDPRDAQA 367
               LG +Y    L  I                 KA  LL         +A K D      
Sbjct: 434  RSILGTLYADEVLSAIPRTGFSASKEDVTVLHRKAISLLENVRFTWKAEAKKNDAHHETI 493

Query: 368  FIDLGELLISSDTGAALDAFKTARTLLK---KAGEEV--PIEVLNNIGVIHFEKGEFESA 422
             + L  L  +     AL        + K     G++V  P+++ NNI  ++++KGE+ +A
Sbjct: 494  LLSLARLYENDQPERALQCLLQVEEIYKYLIDNGDDVMIPLQLTNNIATLYWQKGEYNTA 553

Query: 423  HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
               +++AL                      ++ + K+       +             T+
Sbjct: 554  RTYYQNALN---------------------AIPELKEKDDAADTDA---------LATTL 583

Query: 483  LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN------NLQLSIEL 536
             +NLAR  E   +   A   Y  +L  + DYVDA +RLA +A  R        +Q  ++ 
Sbjct: 584  TYNLARCEEAAGNIEEAVKNYEKLLAYHDDYVDANMRLAYLALRRGAEDGHRRIQKLMQT 643

Query: 537  VNEALKVNGKYPNALSMLGDLELKNDDWVK---AKETFRAASDATDGKDSYATLSLGNWN 593
                L+V   Y      LG  + K+   +     +  ++      +  D Y+ + +GN  
Sbjct: 644  DGNNLEVRALYG---WYLGRQKRKHPIVISDDPEQRHYKHTLQNHEKHDRYSLIGMGNI- 699

Query: 594  YFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDV 648
            Y  A R+ K+  + E        EKA E + + +     N YAA G  +   E +     
Sbjct: 700  YLLAARDIKKENEQEREKRRKLYEKAVEFFDKALQLDPKNAYAAQGIAIASVEDRKDLKT 759

Query: 649  SKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQIL 708
            +  +F++V+E  S           +N  H       +A A++ Y++ L KF    D   L
Sbjct: 760  AISMFSKVKETLSKDAH-----SLVNFGHCLAGLDQWARAIENYESALTKFQLAKDPTTL 814

Query: 709  LYLARTHY---------EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFS-- 753
              L + ++         E E+  +  K+ L    RA+ +AP N    F+  VA  +F   
Sbjct: 815  TCLGKAYFSKGRKERTTEPEKSMESFKNALDYAKRALAIAPDNVMYMFN--VAYVQFQIV 872

Query: 754  --ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLL 811
                +L +T R+ +++ +    LE  ++ FS ++ ++N     +   +I       K+  
Sbjct: 873  QFIMSLPETSRSLEDLEAASKGLEEGIQSFSDIARSNN---PPYPSSEIEARSTMGKNTF 929

Query: 812  DAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEE------------QKKYLLEKR 859
                  R+  ER  Q+ R+ +E   QA LA EARRK EE            +++     +
Sbjct: 930  ------RKQMERAIQKQREYEE-KNQAKLA-EARRKREEDLRRKREAKEAEEREIEKRNK 981

Query: 860  KLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKKD 919
             + D++K+++++   F   K        A + R R EN D      EK+R++      K 
Sbjct: 982  AIADQRKKMQEEAREFAERK--------AEEERIREENSD-----GEKKRKRSSAAGSKS 1028

Query: 920  KSSR 923
            +S+R
Sbjct: 1029 RSTR 1032


>gi|340959291|gb|EGS20472.1| hypothetical protein CTHT_0023040 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 1289

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 249/959 (25%), Positives = 402/959 (41%), Gaps = 187/959 (19%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK---------IE 55
           Y KQ K++   ++L  G+    +   A+ R E+++I+  L   Y Y  +         + 
Sbjct: 80  YAKQKKIDFAIEMLMRGA----NALQANPR-EKLSIITCLCWLYLYKSREAPRVAPDNVP 134

Query: 56  TKQREKEEHFI-LATQYYNKASRIDMHEPSTWVGKGQLLL--------AKG--------- 97
             + + +EH++ LATQ  N+ASRI+   P  ++ +G LLL        +KG         
Sbjct: 135 ASEVKTKEHYLQLATQSLNEASRINPAFPPLFLARGVLLLLRASLQPPSKGVGPTGVDSQ 194

Query: 98  EVEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
           + EQ  +A K   EA R     N+ A++G+A   F+ GRY +SL  Y+  L   P     
Sbjct: 195 KAEQLCNALKSFEEAIRVSQGKNMLAVMGKARALFSLGRYPESLAAYQEVLSKMPDMVDP 254

Query: 154 -IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR 206
             R+GIG C ++LG    ARQA++R L+++PE+  A + L +  L A      N    IR
Sbjct: 255 DPRIGIGCCFWQLGYKDDARQAWERCLEINPESKTANILLGLYYLDASGHVPTNSPEFIR 314

Query: 207 ---KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
              K M E  Q++F++     +A +  A +F    Q   V+ L   A+  T+     S  
Sbjct: 315 LYKKAMTEFTQKSFKLDKNSPLACSTFAGYFLSRKQFDTVDSLAHKAIRYTDVNAVASDG 374

Query: 263 YYNLARSYHSKGDYEKAG-LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           +Y LAR  H  G+ E+A   Y  A          ++   +GL Q+ +  GD   A    E
Sbjct: 375 WYLLARKEHYAGNLERAADCYRRADDARGGAERGYLPAKFGLAQLSVLKGDLGEAKLRLE 434

Query: 322 KVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR-- 363
           K+++    N E +  LG +Y +                + +KA  LL   ++A  DP+  
Sbjct: 435 KIIQ-QSKNYEAMVLLGTLYAEEVFANQSAAVKEDKSAEAKKAIALLEGVRSAWKDPKKN 493

Query: 364 ---DAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKAGEE- 400
              DA   ++L  L  S     AL   +    L                   +K A  + 
Sbjct: 494 LSPDACVLLNLARLYESEQPDKALQCLQQVEQLELSQIPRSEYPPDTEDEAVIKAAIRKL 553

Query: 401 VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 460
           +P ++LNNIG  + ++G+   A + F+ AL     +    S      ID  A +      
Sbjct: 554 LPPQLLNNIGCFYSQEGKHTLATEFFQAALDSCARI----SSQSDSDIDTDALL------ 603

Query: 461 QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL 520
                               T+ FNL R  E      AA   Y  +L ++ DY DA  RL
Sbjct: 604 -------------------TTISFNLGRSYEYEGQIDAAVETYERLLSRHSDYTDARTRL 644

Query: 521 AAIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDW----VKAKET 570
           A I   RN               N + P+A++ L      DLE++    W    V AK+ 
Sbjct: 645 AYIKLRRN-------------PSNKEGPDAVAKLYQENPQDLEVRALYGWFLGRVNAKKR 691

Query: 571 ------------FRAASDATDGKDSYATLSLGNWNYFAA--LRNE--KRAPKLEATHLEK 614
                       F+      D  D YA +++GN +  AA  +R E  +   K  AT+  +
Sbjct: 692 PANLAEDPEQRHFKHTLQNYDKHDRYALVAMGNLHLMAAREMRRETDQDRQKRSATY-SR 750

Query: 615 AKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
           A E + + +     N YAA G  + L E K  +  +  +F +V+E       +Q   V++
Sbjct: 751 AVEFFDKALQLDPKNAYAAQGIAIALIEDKKDYTNALQIFIKVRET------IQDAHVYV 804

Query: 674 NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL- 729
           NL H+Y     F  A++ Y+  L K     DA IL  L RT      AE+  D  K+ L 
Sbjct: 805 NLGHLYAELKQFTKAIESYEIALSKEGKARDANILSCLGRTWLNKGRAERNLDAYKTALE 864

Query: 730 ---RAIHLAPSNYTLRFDAG-----VAMQKFSASTLQKTRRTADEVRSTVAELENAVRVF 781
                + +AP     +F+       +AM   S    + + R + ++      LE A++  
Sbjct: 865 YAENTLSVAPEQLHFKFNVAFVQIQIAMLLIS---FRDSERNSFQLEQASEGLEAAIKTL 921

Query: 782 SHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAERE-EQQNRQRQEAARQA 838
             ++AA N      D E++ N      +  L+ A     A++RE E +N+++ +AA +A
Sbjct: 922 DEIAAAPNPPYPKHDLEQRANMARNTMRKQLERAL----ASQREYEARNKEKLQAAMEA 976


>gi|260949913|ref|XP_002619253.1| hypothetical protein CLUG_00412 [Clavispora lusitaniae ATCC 42720]
 gi|238846825|gb|EEQ36289.1| hypothetical protein CLUG_00412 [Clavispora lusitaniae ATCC 42720]
          Length = 1097

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 223/898 (24%), Positives = 390/898 (43%), Gaps = 131/898 (14%)

Query: 76  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YS 134
           + +D   P     +  + L +   +QA  AF  +L+AD  N  AL+G+A +  ++ + Y+
Sbjct: 145 ANLDDSSPQVLSARAVMHLHEDHADQALQAFDKLLKADPANCFALMGKAQITLSKTQNYT 204

Query: 135 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--LVAL 192
            +L+ Y++ L + P      RLGIGLC + L     A  A++RALQLDP++ +A  L+ L
Sbjct: 205 SALKLYQQVLVLDPLMKPDPRLGIGLCFWFLKDRPMALSAWERALQLDPKSFKAKLLLNL 264

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYPYC-------AMALNYLANHFFFTGQHFLVEQL 245
           A  D     +    + +E  +R+     +        ++ L  LA+ +F  G+H LVE++
Sbjct: 265 ASFDNVFTNSLSDEQFLEGYKRSLTELTHLQLEKTNDSVILLALASFYFSKGKHDLVEKI 324

Query: 246 TETALAV--TNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
               ++    +  P++          S + + L R  ++K D+ ++  Y+  +++ +N+ 
Sbjct: 325 VGKVVSAFSADDKPSRKLSSFATKVLSQASFWLGRVAYAKEDFTQSQKYFHEAIR-LNEN 383

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKA 350
           +  +    GLGQ QL  G    +L  FE +L+  P   E    LG +Y Q     + E+A
Sbjct: 384 N--LLAKLGLGQSQLSRGSIEESLITFESILKTNPKCLEVNYCLGVLYAQQSSKTKQEQA 441

Query: 351 QELLRKAAKI--------------------DPRDAQAFIDLGELLISSDTGAALDAFKTA 390
             +L +  ++                    +P    A++ L +L    D   +L     A
Sbjct: 442 IHMLERYIRLSNNRGLAVENKNEAEALLNKEPVALNAYLTLSKLYEPKDLSQSLVYLHKA 501

Query: 391 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 450
               K+ G +VP+EV NNIGV +F K   + A ++F+ AL        LD        D 
Sbjct: 502 IESRKQTGRDVPLEVYNNIGVFNFSKNSVDVAIENFELALKK------LD--------DL 547

Query: 451 SASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 510
             + LQ KD+                  KVT+ +NLAR  E + D   A  +Y  +L + 
Sbjct: 548 KDAELQ-KDL------------------KVTISYNLARSHE-VSDQNKAIEMYNSLLQEC 587

Query: 511 QDYVDAYLRLAAIAKARNN--------LQLSIELVNEA--LKVNGKYPNALSMLG-DLEL 559
             Y  A LRL  +     N         ++   L   A  L++   Y   +   G  + L
Sbjct: 588 PHYFSAKLRLLFLDAVSTNETSKEEIEKEIKELLAQNASDLEIRSFYGWFIKTFGKKIGL 647

Query: 560 KND-DWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE---ATHLEKA 615
           K D D V  KET        D  D YA +SL   N +  + N+ ++ K E     +  +A
Sbjct: 648 KPDADTVHQKETLV----DFDSHDCYALISLA--NIYCVMANDLKSSKDEEKRKKYFVRA 701

Query: 616 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
            ELYT+V+     N++AA G  +V  E  ++    D+  +++++ +         V++NL
Sbjct: 702 IELYTKVLSIDPKNVFAAQGLAIVYIENKEYHKGLDILRKIRDSLNDI------SVYLNL 755

Query: 676 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 735
            HV      ++ A++ Y+    ++  + D +I+ +L R+ Y     +     L +A+  +
Sbjct: 756 GHVLVELKQYSKAIESYEVAFVRYTDSQDVKIMGFLGRSWYLRGIAEKNLSYLKKALEYS 815

Query: 736 PS--------NYTLRFDAGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRVFSH 783
                     N +L F+  VA  +F      S L   +RT +++   +  L  A++  + 
Sbjct: 816 EEALNKHSGRNGSLVFN--VAFIQFQIAEFVSKLPVEQRTVEDINEAIINLNEAIQSLNK 873

Query: 784 LSAASNLHLHGFDEKKINTHVEYCKH-LLDAAKIH-REAAEREEQQNRQRQEAARQAALA 841
           L++    H   F ++ +        + LL+   +   E  E   Q N + +EA R     
Sbjct: 874 LASDDEKH-PPFPKEDLKARANLGTNTLLNRLNVCLEETKENIAQLNNKLEEAKRLR--E 930

Query: 842 EEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDD 899
           EE  RKA+E +  L EKR  E+E   L ++    Q   +QW     A+       +DD
Sbjct: 931 EEEARKAQELESVLAEKRTKEEE---LAKERARLQEQAQQWAEEARANNIVADDSDDD 985


>gi|406866076|gb|EKD19116.1| tetratricopeptide [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
          Length = 1213

 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 247/1047 (23%), Positives = 422/1047 (40%), Gaps = 204/1047 (19%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
            Y KQ KV+   ++L +G      +       E++++L  L   Y +           G +
Sbjct: 85   YAKQKKVDHAIEMLLKGG-----QAMKGGPKEKLSMLTCLCWMYLWKSREAPRVAPEGSL 139

Query: 55   ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA--------- 105
             ++ + KE +  L+TQ  N+A RI+   P  ++ +G L L K  ++  S +         
Sbjct: 140  SSEAKTKEYYLNLSTQTLNEALRINPGFPPLFLARGVLQLLKASLQPPSKSSAPGALDPE 199

Query: 106  -----------FKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
                       F+  + A +  N+ A+LG++   F+ G+Y++SLE Y+ AL   P     
Sbjct: 200  KADILRASAKSFEDAIRASQGRNMMAVLGKSRALFSLGKYAESLEGYQDALYKMPDLVDP 259

Query: 154  -IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI------- 205
              R+GIG C + LG    A+ A++RAL+++P++  A + L +  L A+            
Sbjct: 260  DPRIGIGCCFWMLGYKQDAKVAWERALEINPDSKIANILLGLFYLDASAHVPTNGPEFMQ 319

Query: 206  --RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
              +K M E  Q+AF+      +     A +F        VE L+  A+  T+     S  
Sbjct: 320  LYKKAMTEYTQKAFKADKNLPLTCATFAGYFLSRKSLPSVETLSHKAIQYTDVNAIASDG 379

Query: 263  YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFE 321
            +Y LAR  H + DY+KA  YY  + +          P  +G  Q+ +  GDF  A    E
Sbjct: 380  WYLLARKEHYEEDYDKAADYYRRADEARGGADRGYLPAKFGAAQLSVLKGDFGEAKLRLE 439

Query: 322  KVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKI 360
            K+++    N E +  LG +Y +                     +G +E  +   + + K 
Sbjct: 440  KMIQ-QSKNAEAMILLGTLYAEEVFQNPTNGPKEEKSLEWKKAVGYLESVRTAWKDSKKN 498

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKAGEE- 400
               DA   ++L  L        +L   +    L                    K +  E 
Sbjct: 499  LMPDASVLLNLARLYEGDQPDKSLHCLQQVEQLEFDQIPQSERPTDNGDEAAFKNSMREG 558

Query: 401  VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 460
            +P ++LNNIG  +++  +FE A + F+ AL        + +  K   ID  A +      
Sbjct: 559  LPPQLLNNIGCFYYQGEKFEMAREMFQVALS-----ACVKAGEKQEEIDTDALV------ 607

Query: 461  QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL 520
                                T+ +NL R  E       A+ +Y  +L ++ DY DA  RL
Sbjct: 608  -------------------TTISYNLGRTYEASGLLGEANTVYEGLLERHSDYTDARTRL 648

Query: 521  AAIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAK-ETFRA 573
            A IA  +N                 + P A+S L      DLE++    W   K  T + 
Sbjct: 649  AYIALRQN--------------PTDEGPKAISKLYQDSSADLEVRALYGWYLGKLHTRKR 694

Query: 574  ASDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAK 616
            A+ A D +              D YA + +GN     A  +R E    K + + +  KA 
Sbjct: 695  ANIAEDPELRHYKHTLQNYEKHDRYALIGMGNLYLITAREMRRETDQEKQKRSGMYTKAV 754

Query: 617  ELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
            E + + +     N YAA G  + L E K  F  +  +F  V++       V+ P V+INL
Sbjct: 755  EFFEKALQLDPKNAYAAQGIAIALVEDKKDFKTALSIFVSVRDT------VKDPSVYINL 808

Query: 676  AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL--- 729
             H++     ++ A++ Y+  L K     DAQIL  L RT     +AE+        L   
Sbjct: 809  GHIFAELRQYSKAIEHYEQALLKD-RQKDAQILACLGRTWLAKGKAEKNATAFAKALEFS 867

Query: 730  -RAIHLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSA 786
             +A+ +AP     +F+      + + +   L +++R+  E+++    LE A+     ++ 
Sbjct: 868  QKALEVAPDQIHFKFNIAFVQIQLATNVYNLAESQRSLAELQAAATGLEEAIESLEIIAR 927

Query: 787  ASNLHLHGFDEKKINTHVEYCKHLLD-----AAKIHREAAEREEQQNRQRQEAARQAALA 841
                          +    Y KH ++     A    R+  ER  Q  ++ +E   +  LA
Sbjct: 928  --------------DPQTPYPKHEVEQRANMARNTMRKQLERSIQAQKEYEEKHAERILA 973

Query: 842  EEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSE----- 896
             +  R+ E++K+  +     E E+ R  +  E  Q++ E+ R    A    +R+      
Sbjct: 974  AKRARELEQKKREDVRIAAEEAERARKSKIAEERQKIAERDRELAEARNEEQRAREAAEM 1033

Query: 897  NDDDEVGHSEKRRRK-----GGKRRKK 918
              D E G   KR++K     GGKR+KK
Sbjct: 1034 TTDSETGDKVKRKKKPSRAAGGKRKKK 1060


>gi|413922693|gb|AFW62625.1| hypothetical protein ZEAMMB73_497393 [Zea mays]
          Length = 454

 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/128 (65%), Positives = 106/128 (82%), Gaps = 2/128 (1%)

Query: 767 VRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQ 826
           VR+TV +L+NA+RVFS LS AS  H HGFDE+KI THVEYCKHLLDAAK+HR+AAE+ EQ
Sbjct: 31  VRATVTKLQNAIRVFSLLSVASTYHSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQ 90

Query: 827 QNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK--EQWRS 884
           QN+Q+ E ARQ ALA+EARR+AEEQ+K+ LE+R+ EDE K+++QQEEHFQRVK  +   +
Sbjct: 91  QNKQKMEVARQIALADEARRRAEEQRKFQLERRREEDELKQVKQQEEHFQRVKGPDVAVA 150

Query: 885 STPASKRR 892
             P S+RR
Sbjct: 151 LMPISRRR 158


>gi|262302965|gb|ACY44075.1| SH2 domain binding protein [Scutigera coleoptrata]
          Length = 178

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 82/178 (46%), Positives = 117/178 (65%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+     +L FYK+AL+ +PSCP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSSNNIPSLLGKACIAFNKKDSRGALAFYKKALRTNPSCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG+L KAR AF+RALQLDP+ V ALV LA+++L       IR G++ + +A+ I P 
Sbjct: 61  FVKLGKLDKARLAFERALQLDPQCVGALVGLAILELNNKTPESIRNGVQMLSKAYAIDPT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQA 178



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 312 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           D R AL  ++K L   P     ++  +GH +V+LG+++KA+    +A ++DP+   A + 
Sbjct: 31  DSRGALAFYKKALRTNPSCPAAVRLGMGHCFVKLGKLDKARLAFERALQLDPQCVGALVG 90

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFE 420
           L  L +++ T    ++ +    +L KA    P    VLN++    F K +++
Sbjct: 91  LAILELNNKTP---ESIRNGVQMLSKAYAIDPTNPMVLNHLANHFFFKKDYQ 139


>gi|354544439|emb|CCE41162.1| hypothetical protein CPAR2_301510 [Candida parapsilosis]
          Length = 1126

 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 252/989 (25%), Positives = 421/989 (42%), Gaps = 150/989 (15%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           M R Y K GK+E+  +I++      I         E I  L +  V+  +  K  +   +
Sbjct: 64  MARAYAKLGKLEEAAKIIQSALDSNI------FGSEDIKTLQSFLVWLHF--KYASLGID 115

Query: 61  KEEHFI--------LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA 112
           K +H +        LAT+ +N      ++  ST + +  L L +G  E+A   F  +L+ 
Sbjct: 116 KVDHLVEAGTGIADLATRIHNDTQSSPVNSTSTLLSQAVLSLFQGNDEEALKIFDKILKR 175

Query: 113 DRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKA 171
           D++N  ALLG+A    N+ + Y ++L+ Y++ L ++P+     RLGIGLC + L     A
Sbjct: 176 DQNNTFALLGKAQAMLNKSKSYGNALKLYQQVLVLNPTTTPDPRLGIGLCCWFLNDEKMA 235

Query: 172 RQAFQRALQLDPENVEALVAL-------AVMDLQANE--AAGIRKGMEKMQRAFEIYPYC 222
            QA++RAL+LDP N++A + L       A  +  ++E   +  ++ + ++    +     
Sbjct: 236 IQAWERALELDPNNLKARIYLNLAHFHRAFNNSWSDEEFVSNYKQCLSELSIIHKSNVSD 295

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALA-----------VTNHGPTK------SHSYYN 265
           +  L  LA+++F       VE+L    +            +T    +K      S     
Sbjct: 296 STVLLVLASYYFSKNNFETVEKLLRKVVKDITGDDNLSKLITYSKASKYELNVLSECGTW 355

Query: 266 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
           L R   S+GD+ +A  Y+  ++K +N  +  I    GLGQ Q   G    A   FE +L 
Sbjct: 356 LGRIKFSEGDFIQAAKYFQEAIK-LNDLN--IVAKLGLGQSQYNRGSIDEAALTFESILR 412

Query: 326 IYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI-------------------DPR 363
              +  E   +LG IY +    +K   A + L +  K+                   +P 
Sbjct: 413 SNANCLEANYSLGIIYAKQSSKKKKELAIQALERYIKLSNNRGISASKNDADFLLNKEPV 472

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 423
              A++ L  L  ++D   AL     A    K+ G++VP+E+ NNIGV  F K  F+ A 
Sbjct: 473 ALNAYLTLSNLYENTDLMQALLYLNKAVEARKQIGKDVPLEIYNNIGVFQFTKQNFKGAL 532

Query: 424 QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN-KVTV 482
           ++F+ A+         D       +     +L                 V+LP + KVT+
Sbjct: 533 ENFQIAI---------DKLDGAEFLSPDGDVL-----------------VDLPNDLKVTL 566

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL---VNE 539
            FN AR  E  ++  A   +Y+ +L +  +Y  A LR+  ++    +     E+   ++E
Sbjct: 567 TFNSARTKELSNEKDALD-MYQSLLSECPNYFSAKLRILFLSCISEDGLTPKEIQSEIDE 625

Query: 540 ALKVNGKYPNALSMLG--------DLELKND-DWVKAKETFRAASDATDGKDSYATLSLG 590
            LK+N       S  G         L LK D D    KET        D  D YA +SL 
Sbjct: 626 LLKLNASDMEVRSFYGWFAKNFGKKLGLKPDADTAFQKETLVE----YDKHDCYALISLA 681

Query: 591 NWNYFAA--LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV 648
           N     A  L+    A K + T+  +A ELYT+V+     N+YAA G  +V  E  +   
Sbjct: 682 NIYCILARDLKGSSVAEK-KRTYYVRATELYTKVLTVDRKNVYAAQGLAIVYIENKESTK 740

Query: 649 SKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQIL 708
             D+  +++++ +         V++NL HV      +  A++ Y+  L ++    D QIL
Sbjct: 741 GLDILRKIRDSLND------ISVYLNLGHVLCDVKQYGKAIENYELALTRYTDGKDVQIL 794

Query: 709 LYLARTHYE---AEQWQDCKKSLL----RAIHLA-PSNYTLRFDAG-VAMQKFSASTLQK 759
            +L R       +EQ  +  K+ L    RA +L   S   L F+   +  Q     T Q 
Sbjct: 795 TFLGRAWTLRGISEQSLNFFKTALDYTKRAFNLTRGSKSALLFNISYIQFQIADFITKQP 854

Query: 760 T-RRTADEVRSTVAELENAVRVFSHLSAASNLH-------LHGFDEKKINTHVEYCKHLL 811
             +R   ++   +  L  A+     LS+    H       L G      +T +    + L
Sbjct: 855 VQKRQPQDISDAITGLSEAIETLIQLSSDEEKHPPYPKDELRGRANLGSSTLLNRLTNAL 914

Query: 812 DAAKIHREAAEREEQQNRQRQEAARQAALAE-EARRKAEEQKKYLLEKRKLEDEQKRLRQ 870
           D  K   + AE E     QR E A+Q    E EA  + E+++   +++++ E  ++R   
Sbjct: 915 DETK--EDIAEIE-----QRLETAKQLREKEKEAELQKEQERISAMKEKEAELAKQRAVL 967

Query: 871 QEEHFQRVKEQWRSSTPASKRRERSENDD 899
           QE+  Q+  E+ R    A+   E  ENDD
Sbjct: 968 QEQA-QQWAEESRIDVTAN---EEEENDD 992


>gi|328857310|gb|EGG06427.1| hypothetical protein MELLADRAFT_77838 [Melampsora larici-populina
           98AG31]
          Length = 1102

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 193/792 (24%), Positives = 324/792 (40%), Gaps = 148/792 (18%)

Query: 58  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 117
           Q  KE +   A  Y N+A+ ID   P     +     AK E +Q  +  + +L+    ++
Sbjct: 121 QPIKEVYLSRALLYVNEATAIDPKNPLVLDAR-----AKKEFDQVFNTCEQILKDKPTHL 175

Query: 118 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 177
           PALL +A V F+R  Y  +L+ Y++ L   P      R+GIG C + LG+   A++A+QR
Sbjct: 176 PALLAKARVLFHRKYYRPALKIYQQILSHAPMFLPDPRIGIGCCFWFLGETSMAKKAWQR 235

Query: 178 ALQLDP----ENVEALVAL----AVMDLQANEAAGI---RKGMEKMQRAFEIYPYCAMAL 226
           ++ + P    ++ + L+ L    A  D+  ++ A +   ++GM  +Q  F+     A++ 
Sbjct: 236 SIAVHPGKASQSAQVLLGLVNFHASRDIHLSDEAKLSAYQEGMSYIQGTFKTNRNIAISA 295

Query: 227 NYLANHFF---------FTGQHFL-VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
             LA+HF          F G H +   ++ E A+   +  P    +   LAR++H++G  
Sbjct: 296 AVLASHFLTANNWATVSFEGPHLVWATKMAERAVQYADANPILVEARLVLARAFHAQGKL 355

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            +A   Y A+   I      + P  G+ Q+ +   ++  A+  FE VL   P   E L  
Sbjct: 356 VEAQKEYQAA---ITLDRSVLNPVLGVAQIMVAQNEYVPAINTFENVLRRQPRCIEALVN 412

Query: 337 LGHIYVQL-----------GQIEKAQELLRK-------------AAKIDP---------- 362
           L  +   L            +  KA++L  +             AA  DP          
Sbjct: 413 LAALRTHLAFTSSSSTEAAAEKTKARDLYEQITRLFATRIKKPGAAPQDPGIMPPRIREV 472

Query: 363 -RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
             D   +ID+  L   +D G AL  +  +  + K   + +P  + NNIGV+ ++ G    
Sbjct: 473 ASDPDLYIDIARLSTDTDIGRALKGYCQSLAVRKDLEKPIPAMLFNNIGVLEWKNGNLRE 532

Query: 422 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK-- 479
           + +  + AL          + T + V+                     G+  E   N+  
Sbjct: 533 SQEQIESAL----------AATASAVV---------------------GDETERETNERA 561

Query: 480 -VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            V +L+NL  + E   +   A  +Y  IL ++ +YVDA  RLA +  +  N   +  L+ 
Sbjct: 562 AVCMLYNLGVVCEDTGEKEKAKDIYERILIRHPEYVDAKARLALMHLSHRNFDKANGLLK 621

Query: 539 EALKV---NGKYPNALSMLGDLELKNDDWVKAKETFRAAS-DATDGKDSYATLSLGNWNY 594
           EAL     NG+    L  L    L   + +K    F  A+    D +D YA  + G   Y
Sbjct: 622 EALTSQTGNGE----LRALYTYFLIESNQIKQARDFSVATLKDHDKQDIYALCASGALLY 677

Query: 595 FAALRNEKRAPKLE---ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE--------- 642
             A  N+   P+     A    +A E + + I       +AA G  + LAE         
Sbjct: 678 TQARENKDPGPEASMERANRFFRAAEFFEKAIQLDHHCAFAAQGLAIALAEHVIGGASMG 737

Query: 643 --KGQFDVSK-------------DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFA 686
              GQ   +               +FT+V+EA + GSV+V       NL H Y+ +  F 
Sbjct: 738 SQNGQSSGTDGNAIRAKNIRDAITIFTKVKEAVNDGSVYV-------NLGHCYYLRDEFE 790

Query: 687 LAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI-------HLAPSNY 739
            +++ Y    ++FY   +  +LLYLAR  ++         SL  A+        L P + 
Sbjct: 791 RSIENYNTASKRFYQGKNIPVLLYLARAWFQKASKDQSFVSLRNALTNAQAAQELNPRDA 850

Query: 740 TLRFDAGVAMQK 751
              F+  +  QK
Sbjct: 851 ATAFNVALIQQK 862


>gi|448119593|ref|XP_004203770.1| Piso0_000789 [Millerozyma farinosa CBS 7064]
 gi|359384638|emb|CCE78173.1| Piso0_000789 [Millerozyma farinosa CBS 7064]
          Length = 1092

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 249/1053 (23%), Positives = 439/1053 (41%), Gaps = 193/1053 (18%)

Query: 46   VYYTYLGKIETKQREKEEHFILATQYYNKASRID--MHEPSTWVGKGQLLLAKGEVEQAS 103
            + + YL K  ++  EK+    LA Q  N+ S       + S  + K  L L + ++EQ+ 
Sbjct: 102  LVWVYL-KYASQGIEKDNSLNLAQQGINELSNAGGVSGDISYLLSKAVLHLYRDDIEQSL 160

Query: 104  SAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCR 162
              F  VL+A+ +N  A+LG+A +  N+ + Y+++L+ Y++ L ++P      R+GIGLC 
Sbjct: 161  DTFDAVLKANYNNCFAILGKAHIILNQTKNYANALKLYQQVLILNPLMKPDPRIGIGLCF 220

Query: 163  YKLGQLGKARQAFQRALQLDPENVEALVALAVM-------------DLQANEAAGIRKGM 209
            + L     A +++QRAL++DP+NV+A + L +              D ++N  A + + +
Sbjct: 221  WFLKDEKMAIKSWQRALEIDPQNVKAKILLNLAEFNTAFNYSLNDEDFRSNYQACLNQVV 280

Query: 210  EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN--------------- 254
                 A    P     L  LA+++F    + +V++L E  +   +               
Sbjct: 281  TIYNEA----PNDISVLLTLASYYFSKKNYDVVQKLCEKVIGEVSESAKSGKASSSSKLS 336

Query: 255  --HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
                   S +   L R + +K D+ +A  Y+  ++K +N+ +  +    GLG  Q+  G 
Sbjct: 337  RFQSNVLSQTALWLGRVFFAKSDFIQAQRYFHEAIK-LNENN--LLAKLGLGHSQINRGS 393

Query: 313  FRSALTNFEKVLEIYPDNCETLKALGHIYV--------QLG-QI---------------- 347
               A   FE +L+  P   E    LG +Y         +LG QI                
Sbjct: 394  TEEATITFESILKTNPKCSEVNYCLGMLYAKHKSRRKQELGIQILERYIRLCNNRGLSDN 453

Query: 348  ---EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 404
               E   ELL K    +P    A++ L  L  S D   +L+  K A    ++  ++VP+E
Sbjct: 454  KNEEDNFELLNK----EPVILNAYLTLSRLYESRDINQSLNYLKKAIESRRQIKQDVPLE 509

Query: 405  VLNNIGVIHFEKGEF-ESAH------------QSFKDALGDGIWLTLLDSKTKTYVIDAS 451
            + NNIGV  F K  + ESA             QSF D  GD     L+D K+        
Sbjct: 510  IYNNIGVFQFLKSNYSESAENFQKSYEKLEAAQSFTDETGD----VLMDLKSDL------ 559

Query: 452  ASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 511
                                       KV++ FNLAR  ++I D   A  +Y  +L +  
Sbjct: 560  ---------------------------KVSLSFNLAR-SKEISDQSDAIEIYNGLLKECP 591

Query: 512  DYVDAYLRLAAIA-----KARNNLQLSIELVNEALKVNGKYPNALSMLG--------DLE 558
             Y  A LRL  +       A++ ++   E V E L V+       S  G         L 
Sbjct: 592  HYFSAKLRLLFLNCLINDSAKDKIK---EEVEEMLSVSASDLEIRSFYGWFSKNFGKKLG 648

Query: 559  LKNDDWVK-AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE--ATHLEKA 615
            +K DD  K  K+T        D  D YA LSL N  Y    R+ K + + E    +  +A
Sbjct: 649  MKPDDDTKHQKDTLV----EYDSHDCYALLSLANI-YCIMARDIKGSSQDEKKKKYYIRA 703

Query: 616  KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
             EL+++V+     N++ A G  +V  E  + +   +L  +++++ +         V++NL
Sbjct: 704  IELFSKVLSVDPKNVFGAQGLAIVYIENKELNKGLELLRKIRDSLND------ISVYLNL 757

Query: 676  AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQD-----------C 724
             HV      FA +++ Y+  L ++    D  IL +L R  Y     +            C
Sbjct: 758  GHVMLELKQFAKSIEHYEIALMRYSNGNDPNILSFLGRAWYMRGMSEKNLSFMNTALSYC 817

Query: 725  KKSLLRAIHLAPSNYTLRFDAGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRV 780
            +++L     L  S     F   +A  +F      + L   +R  ++++  +  L+ A+  
Sbjct: 818  ERALSLTTGLKSS-----FKFNIAYVQFQIAELVTKLPVEQRKVEDIKEAITNLQKAIES 872

Query: 781  FSHLSAASNLHLHGFDEKKINTHVEYCKH-LLDAAKIHREAAEREEQQNRQRQEAARQAA 839
             + L++    H   + +  + +      + LL+      EA  +  QQ+ QR E A++  
Sbjct: 873  LNQLASDEEKH-PPYPKSDLKSRASLGTNTLLNRLNTCLEATIKNVQQSEQRMEEAKRLR 931

Query: 840  LAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDD 899
              E AR + E+++     + K  ++++ L ++    Q   +QW  +  A      SE+DD
Sbjct: 932  EEERARIQREQEET----RAKQREKEEELAKERAALQEQAKQW--AEEARMNVVESEDDD 985

Query: 900  ---DEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIG 956
               DE   + +++ K   +  K K  +   +   AE+D     E+    D  ++   P  
Sbjct: 986  RLFDEESAANEKKSKKASQGSKSKKGKGKKKRVVAESD----SEQSSKSDEEVDVASPKK 1041

Query: 957  QMNDQDDDV----EENANDRLAAAGLEDSDVDD 985
            +  + DD+     +E A+ +  A  L +  +DD
Sbjct: 1042 RSREDDDESKDGQDETADKKRKANALSNEIIDD 1074


>gi|430813762|emb|CCJ28920.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 1053

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 239/1002 (23%), Positives = 413/1002 (41%), Gaps = 210/1002 (20%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK--IETKQREK 61
           EY +QG V Q   IL  G   +I       R  ++ + + L   Y    +   +T  +E 
Sbjct: 59  EYRRQGYVNQAIDILTRGLKADIS------RENKLPLYSMLAALYLEKARRAPKTTNQEH 112

Query: 62  EEHFILATQYY--------NKASRIDMHEPSTWVGKG--QLLLAKGE---VEQASSAFKI 108
            E  I    YY        N+A+RID       + +    ++ A  E   ++QA   F  
Sbjct: 113 SESTIQTKDYYHQQVTQALNEANRIDFSFLPNILTRAVWNIMRAASEKTLMDQAGKYFDS 172

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
           VL+ DR+N+ A+LG+A + F+   Y+ +L+ Y+  L   P      R+GIGLC ++L   
Sbjct: 173 VLKTDRNNLFAMLGKARILFSHKNYTGALKLYQTILSSKPDFIPDPRIGIGLCFWELNMK 232

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDL-QANEAAGI-------RKGMEKMQRAFEIYP 220
             A+ A++R+L+LD +NV +   LA+  L  A    G        +K ++  Q A++   
Sbjct: 233 QDAKAAWERSLELDSKNVSSNTLLALYHLYSAFSKTGTSEFLEEYKKSLQYAQNAYKESQ 292

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA- 279
             + + N L+++FF                                 ++ +SK +YEKA 
Sbjct: 293 EASYSANILSSYFFS-------------------------------KKNINSK-NYEKAS 320

Query: 280 GLY-YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           GLY +  + KE N    FI    GLGQ++L   D   A   FEK+ E  P   E L  LG
Sbjct: 321 GLYQHSYNTKESN----FI-SAIGLGQIKLIQDDIIGAKLIFEKITEQNPKCIEALTILG 375

Query: 339 HIYV------------QLGQ------IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
            IY             QL +      +E+A  L+  + + D  D+  FI L  L    D 
Sbjct: 376 SIYTYEILSINSKNDKQLEKQKAKSLLERAILLINNSTERDFSDSGIFITLAALCEDEDN 435

Query: 381 GAALD--------------AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
             +L+              A++ A  L  +    +  ++LNNIGV++  K    +A Q +
Sbjct: 436 NISLECKEIYIYYLILMTLAYERALNLEHRFPTNILPQLLNNIGVLYHTKENLINARQFY 495

Query: 427 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 486
           +DAL   +  ++   +  T  +DA  +                           T+ +NL
Sbjct: 496 QDALNQCV--SIGQQENNTTDVDALVT---------------------------TLTYNL 526

Query: 487 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 546
           AR  EQ  +   A   Y  +L ++ DYV+A +RL  +   +   + + + +   ++ +  
Sbjct: 527 ARCEEQAENYEEAKKFYEELLQRHPDYVEARVRLCHMEIMKGGTEDTSKKIKRLIETDPD 586

Query: 547 YPNALSMLGDLELKNDDWVKAKETFRAASDAT-------------DGKDSYATLSLGNWN 593
             +  +  G        W  +++ +  AS+               D  D Y+  ++GN N
Sbjct: 587 NLDVRAYFG--------WYLSRQKWNKASNDNPEQRHYTHTLKYFDKHDRYSLTAMGNLN 638

Query: 594 YFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 649
              A R  +    +E        EKA E + + +     N YAA G  + LAE  Q   +
Sbjct: 639 LRIA-RESRPTTDIEKEKRQKIYEKAVEFFDKALQLDPKNAYAAQGIAIALAENKQHAKA 697

Query: 650 KDLFTQVQEAASG-SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQIL 708
             + ++V+E     SV++ M      +     A  ++ LA+  YQN      +++  +  
Sbjct: 698 LLILSKVRETLKNESVYINMGHCLTEMKQYSRAIESYELALNKYQNRSNLITFSSLGKAW 757

Query: 709 LYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADE 766
           L   +        ++  K   +A+ L P+N  + F+      KF+  A  L + RR+ D+
Sbjct: 758 LQRGKEERSLLALKEALKYTEKALKLQPNNTAIIFNIAFIQFKFAEIARILPENRRSVDD 817

Query: 767 VRSTVAELENAVRVFSHLSAASNLHLHGFD----------------EKKINTHVEYCKHL 810
           +   +  L NA+  FS L+ + +      D                E+ I    E+    
Sbjct: 818 LEYALKILNNAIDTFSDLANSKHPPYSKEDIQQRANMGRNTTLRQLERAIQQQKEF--ES 875

Query: 811 LDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQ 870
            + AK+     +R+E+Q R++ EA        EA R +EE+K+     R+L +E++ +++
Sbjct: 876 TNLAKLDSARQKRKEEQERKQAEA--------EALRASEEKKQ-----RELAEERRIMQE 922

Query: 871 QEEHFQRVKEQWRSSTPASKRRERS---------ENDDDEVG 903
           Q      +KE W     A KR+E +         + D D+ G
Sbjct: 923 Q------IKE-W-----AMKRKEENSIIEDDTEKDKDSDDQG 952


>gi|262302957|gb|ACY44071.1| SH2 domain binding protein [Phrynus marginemaculatus]
          Length = 178

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/178 (46%), Positives = 118/178 (66%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            YKLG+  K+R AF+RALQLDP+ V ALV LAV++L       IRKG++ + +A+ I   
Sbjct: 61  FYKLGKHDKSRLAFERALQLDPQCVGALVGLAVLELNQKTPDLIRKGVQMLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQLARAFHIQGDYDQA 178


>gi|336372060|gb|EGO00400.1| hypothetical protein SERLA73DRAFT_122419 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336384811|gb|EGO25959.1| hypothetical protein SERLADRAFT_369311 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1089

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 225/1001 (22%), Positives = 423/1001 (42%), Gaps = 150/1001 (14%)

Query: 4    EYFKQGKVEQFRQILEEG-----------SSPEIDEYYADVRYERIAILNALGVYYTYLG 52
            EY+++G +E   +I +             SSP I    A+++  R      L +      
Sbjct: 56   EYWRRGYLEAAEKIAQSAIDCFHVNGAIASSPPIYSLLANIQIARARKAPKLIIPSARED 115

Query: 53   KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG-------EVEQASSA 105
            ++ + +R KEE++  A QY N   R    E    VG     L +G        ++ A  +
Sbjct: 116  RL-SNERPKEEYYKEAAQYLNSGERA-AAESGEGVGGTLAFLTRGIQQLATRSMDDALRS 173

Query: 106  FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
            F+ VL     N+ ALLG+A + + R  Y  +L+ +++ LQ+ P C    R+GIGLC + +
Sbjct: 174  FEGVLAEKPTNLIALLGKARILYARRGYPQALKLFQQVLQLSPQCQPDPRIGIGLCLWAM 233

Query: 166  GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG---------IRKGMEKMQRAF 216
                KA+ A+QR+L+++P    AL+ L +  + A++A              G + ++RAF
Sbjct: 234  DHKAKAKAAWQRSLEVNPSEWSALLLLGLESINASKAENQSEEEKAHLFLTGTKMIERAF 293

Query: 217  EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
                  A A N L   F   G +    +L E  +   +     +  Y   AR  H++G  
Sbjct: 294  NANQKSAAAANALCELFLRKGNYKRALKLAERTVQFADTLTVLTEGYLRAARVLHAEGSI 353

Query: 277  EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI-----YPDNC 331
             +A  YY ++ +   +P + +    GL Q+Q++  +  +A+   + +L+       P+  
Sbjct: 354  SEATKYYTSATE--GQP-KHVLGAIGLAQMQIQNDEAAAAIHTLDTLLQPPNPQRSPEAT 410

Query: 332  ETLKAL-GHIYVQLGQIEKAQELLRKA-------------------AKIDPRDAQAFID- 370
              L +L  H    +   +  QE ++                     AK   R ++  +D 
Sbjct: 411  VMLASLRSHPRPGISTDDMVQEKIKARELYDRVIKSLEDDNRIHDRAKEPSRTSRRILDD 470

Query: 371  ------LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 424
                  + +L    +      + + A  + +  G+  P  +LNN+G +    G+ + A  
Sbjct: 471  MDMHAEIAKLWQEENLDRTGKSLREALRISEATGQTDP-RLLNNLGALQHLDGDLDQART 529

Query: 425  SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 484
             ++ AL                    +AS L              G+ +    +  ++L+
Sbjct: 530  MYESAL-------------------TTASAL--------------GSELGEGMS-TSILY 555

Query: 485  NLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 544
            NLAR+ E+  D   AS  Y  +L ++ +Y DA +R A +    N+   + EL+ +AL   
Sbjct: 556  NLARVYEEKGDDTMASEAYDKLLTRHPEYADAKIRQAQMLANLNHPNEAHELLKQALSSQ 615

Query: 545  GKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRA 604
                N  +      ++++    AK+   A     D  D Y+  + G   Y  +  +   +
Sbjct: 616  NSNLNLRAFYTYFLIQSNLPKPAKDFVFATLKDHDKYDVYSLCAAGWIMYHQSRESRDAS 675

Query: 605  PK-LEATH--LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-----------------KG 644
            PK LE      +++ E Y + +    +   AA G  +V AE                 + 
Sbjct: 676  PKGLEERRRGFQRSAEFYEKALQYDPNCAVAAQGLAIVTAEDSLGSFSAPSSSSTDEAQK 735

Query: 645  QFDVSK---DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFY 700
            +F  ++   D+F +V+E+ + GSV+V       N+ H Y+A+  F  A++ Y+    +FY
Sbjct: 736  RFKNARDALDVFAKVRESLNDGSVYV-------NMGHCYYARDEFDRAVESYETASSRFY 788

Query: 701  YNTDAQILLYLARTHY----EAEQWQDCKKSLL---RAIHLAPSNYTLRFDAGVAMQKFS 753
               +  +LL L R+ Y    + + +    K+L     A+H+ P++  + ++  +  QK +
Sbjct: 789  SGHNVSVLLCLCRSWYAKANKDQSFTSMNKALKFAEMALHIQPNDKAIVYNIAMIQQKAA 848

Query: 754  ASTLQKT--RRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLL 811
                  T  +R+  ++   +A+  +A R+F+ L AA    +  +  +  +   +Y + +L
Sbjct: 849  ELLFGITPAKRSLKDLERAIAQAGHAQRLFASL-AADPAPVVPYSREMADHRRKYGESML 907

Query: 812  DAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEE---------QKKYLLEKRKLE 862
                 H  A +  E +   + EAARQ  L E+ R++A E         Q + L E+R++ 
Sbjct: 908  RRGDEHLSAQKHFEAEAHAKLEAARQKRLEEKRRQEATELARVEELRQQAEKLAEERRIA 967

Query: 863  DEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVG 903
             E      +E   +  +E+ R S  A+ RR + EN   + G
Sbjct: 968  RETALEWSREVQVESDEERERKSKKAA-RRPKIENGSGDEG 1007


>gi|262302931|gb|ACY44058.1| SH2 domain binding protein [Lepas anserifera]
          Length = 178

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 115/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +++P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNSIPSLLGKACIAFNKKDYKGALAFYKKALRTNPQCPADVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG + KAR AF+RAL+LD   V ALV LA+++L   +   IR G++ + RA+ I P 
Sbjct: 61  FLKLGNVEKARLAFERALELDGNCVGALVGLAILELNNKQPESIRSGVQMLSRAYTIDPT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+QL   AL  T +   ++ S Y LAR++H + DYEKA
Sbjct: 121 NPMVLNHLANHFFFKKDYVKVQQLATYALYNTENDAMRAESCYQLARAFHVQADYEKA 178


>gi|262302881|gb|ACY44033.1| SH2 domain binding protein [Acanthocyclops vernalis]
          Length = 175

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 116/174 (66%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           F  VL  + +N+PALLG+AC+ +N+  Y  +L FYK+AL+ +P+CP ++RLG+GLC YKL
Sbjct: 2   FDFVLNQEPNNIPALLGKACIAYNKKDYKGALAFYKKALRTNPNCPASVRLGLGLCYYKL 61

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G   KAR AF+RA +LD   V ALV LA++DL   ++A I++G+ K+ +A+ I P   M 
Sbjct: 62  GNEAKARMAFERAYELDSNCVGALVGLAILDLNQQKSAAIQEGVRKLSKAYTIDPSNPMV 121

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + D+ +A
Sbjct: 122 LNHLANHFFFKKDYTKVQHLXLHAFHNTENEAMRAESCYQLARAFHVQNDFTQA 175


>gi|262302945|gb|ACY44065.1| SH2 domain binding protein [Hexagenia limbata]
          Length = 178

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 116/178 (65%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL   ++N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSQNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAGVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RALQLD + V ALV LAV+ L    A GIR G++ + +A+ I P 
Sbjct: 61  FMKLGNQEKARLAFERALQLDAQCVGALVGLAVLQLNEQTADGIRSGVQMLSKAYTIDPT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S + LARS+H +GDY+++
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEAMRAESCFQLARSFHVQGDYDQS 178



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 8/135 (5%)

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE--TLKALGHIYVQLGQI 347
           +N+    I    G   +     D+R AL  ++K L   P NC       +GH +++LG  
Sbjct: 9   LNQSQNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNP-NCPAGVRLGMGHCFMKLGNQ 67

Query: 348 EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--V 405
           EKA+    +A ++D +   A + L  L ++  T    D  ++   +L KA    P    V
Sbjct: 68  EKARLAFERALQLDAQCVGALVGLAVLQLNEQTA---DGIRSGVQMLSKAYTIDPTNPMV 124

Query: 406 LNNIGVIHFEKGEFE 420
           LN++    F K ++ 
Sbjct: 125 LNHLANHFFFKKDYN 139


>gi|262302897|gb|ACY44041.1| SH2 domain binding protein [Chthamalus fragilis]
          Length = 178

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 114/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +++P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNSIPSLLGKACIAFNKKDYKGALAFYKKALRTNPECPADVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL+LD   V ALV LA+++L   +   IR G++ + RA+ I P 
Sbjct: 61  FLKLGNADKARLAFERALELDGNCVGALVGLAILELNNKQPESIRSGVQMLSRAYTIDPT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+QL   AL  T +   ++ S Y LAR++H + DYEKA
Sbjct: 121 NPMVLNHLANHFFFKKDYVKVQQLATYALYNTENDAMRAESCYQLARAFHVQADYEKA 178


>gi|262302941|gb|ACY44063.1| SH2 domain binding protein [Loxothylacus texanus]
          Length = 178

 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 115/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +++P+LLG+AC+ F +  Y  +L FYK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADTQFNFVLNQSPNSIPSLLGKACIAFYKKDYKGALAFYKKALRTNPRCPADVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG + KAR AF+RAL+LD   V ALV L+V++L   +   IR G++ + RA+ I P 
Sbjct: 61  FLKLGNVDKARLAFERALELDVNCVGALVGLSVLELNNKQPESIRNGVQMLSRAYTIDPT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+QL   AL  T +   ++ S Y LAR++H +GDYEKA
Sbjct: 121 NPMVLNHLANHFFFKKDYVKVQQLATYALYNTENDAMRAESCYQLARAFHVQGDYEKA 178


>gi|262302895|gb|ACY44040.1| SH2 domain binding protein [Semibalanus balanoides]
          Length = 178

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 113/178 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL     ++P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPSSIPSLLGKACIAFNKKDYKGALAFYKKALRTNPQCPADVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL+LD   V ALV LA+++L   +   IR G++ + RA+ I P 
Sbjct: 61  FLKLGNADKARLAFERALELDANCVGALVGLAILELNNKQPESIRSGVKMLSRAYTIDPT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+QL   AL  T +   ++ S Y LAR++H + DYEKA
Sbjct: 121 NPMVLNHLANHFFFKKDYVKVQQLATYALYNTENDAMRAESCYQLARAFHVQADYEKA 178


>gi|294654515|ref|XP_456576.2| DEHA2A05830p [Debaryomyces hansenii CBS767]
 gi|199428943|emb|CAG84532.2| DEHA2A05830p [Debaryomyces hansenii CBS767]
          Length = 1144

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 225/936 (24%), Positives = 398/936 (42%), Gaps = 162/936 (17%)

Query: 47  YYTYLG----KIETKQREKEEHFILATQYYNKASRIDMHEPSTWV--GKGQLLLAKGEVE 100
           +++YL     K  +    K E+ + AT+  N  S +D  + S  V   K  L L K ++E
Sbjct: 98  FHSYLSWLYLKFVSSGINKGENLVNATEELNHVSSLDSSKGSVSVLLAKAVLYLYKDQIE 157

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIG 159
            A   F  +L+ D +N  ALLG+A +  N+ + Y+++L+ Y++ L ++P      R+GIG
Sbjct: 158 PALDIFDRLLKIDNNNCFALLGKAQIILNKTKNYANALKLYQQVLILNPLMKPDPRIGIG 217

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQANEAAGIR-------KGME 210
           LC + L     A  +++RAL+LDP N++A  L+ LA  ++  N + G +       K ++
Sbjct: 218 LCFWFLKDEPMALSSWRRALELDPTNLKAKILLNLANFNINFNNSLGDKDFQLNYEKCLK 277

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL--------AVTNHGPTK--- 259
           K+   ++     A+ L  LA+++F   ++ LVE++    +        +   + P+K   
Sbjct: 278 KLADNYKENSNDAIILLTLASYYFSKEEYSLVEKICNKVIHSISGNSASTKLYNPSKVSR 337

Query: 260 ------SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
                 S + + L R   +K D+ ++  Y+  ++K +N+ +  +    GLGQ Q+  G  
Sbjct: 338 FQSNLLSQAAFWLGRVAFAKSDFMQSQKYFHEAIK-LNENN--LMAKLGLGQSQINRGST 394

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYV-------QLGQIEKAQELLRKAAKI------ 360
             A   +E +L+  P   E   +LG +Y        Q   I   +  LR A  +      
Sbjct: 395 EEATITYESILKTNPKCLEVNYSLGVLYSNHKSKRKQEQGISMLERYLRLAKNMGGQPSN 454

Query: 361 ------------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
                       +P    AF+ L +L  S D   +L     A    K+  ++ P+E+ NN
Sbjct: 455 KNEDDGSEIMNQEPVALNAFLILSKLHESKDMNQSLTYLNKAIESRKQINQDAPLEIYNN 514

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
           IGV +F K  +E+A   F+ A            K KT                  + F+N
Sbjct: 515 IGVFNFIKHNYEAASNIFQTA----------SEKLKT-----------------CNDFKN 547

Query: 469 DGNHVELPWN---KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 525
           +   V +       VT+ FNLAR  E  +++ +  + Y  +L    +Y  A LRL  +  
Sbjct: 548 ENGDVLMDLRDDLNVTISFNLARSKELSNESESIEI-YESLLKDCPNYFSAKLRLLFLDC 606

Query: 526 ARNNLQLSIEL---VNEALKVNGKYPNALSMLGDLELKND-DW-VKA---KETFRAASDA 577
              N     E+   V   L +N           DLE+++   W VK    K   +  +D 
Sbjct: 607 VSTNKSTKEEIKQEVENLLDLNA---------SDLEIRSFYGWFVKTFGKKVGMKPDADT 657

Query: 578 T---------DGKDSYATLSLGNWNYFAALRNEKRAPKLE--ATHLEKAKELYTRVIVQH 626
                     D  D YA LSL N  Y    R+ K + + E    +  +A EL+T+V+   
Sbjct: 658 NHQKDTLVEYDSHDCYALLSLANI-YCIMARDIKGSSQDEKKKKYYIRAVELFTKVLSVD 716

Query: 627 TSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 686
             N+Y A G  +V  E  + +   D+  +++++ +         V++NL HV      ++
Sbjct: 717 PHNVYGAQGLAIVYIENKESNKGLDILRKIRDSLND------ISVYLNLGHVLLDLKQYS 770

Query: 687 LAMKMYQNCLRKFYYNTDAQILLYLART-----------HYEAEQWQDCKKSLLRAIHLA 735
            A++ Y+  L +F  N D++IL +L R             Y        +K+L  A    
Sbjct: 771 KAIENYEIALMRF-ANNDSKILSFLGRAWLSRGLTEKNLSYLNNALSYSEKALQNATGAK 829

Query: 736 PSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH-- 791
            S   LRF+      + +   S L   +R  D+++  +  L  A+   + LS+    H  
Sbjct: 830 SS---LRFNMAYIQFQIAEFISKLPVEQRLIDDIKKGIDNLNTAIETLNSLSSDDEKHPP 886

Query: 792 -----LHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR 846
                L        NT +      LD      E+  + E + ++ +E   Q     E  +
Sbjct: 887 YPKSELKARANLGTNTLLNRLNACLDET---VESVTKSEIRLKEAKELREQ-----ETAQ 938

Query: 847 KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQW 882
             +EQ++ + ++R++E+E  + R +    Q   +QW
Sbjct: 939 LLQEQEERIAKERRIEEEMAKERAK---LQEQAQQW 971


>gi|262302935|gb|ACY44060.1| SH2 domain binding protein [Limnadia lenticularis]
          Length = 178

 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 118/178 (66%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ + +CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACISFNKKDYRGALAFYKKALRTNGNCPAGVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG L KAR AF+RAL+LDP+ V ALV LA+++L  ++A  IR G++ + +A+ I   
Sbjct: 61  FVKLGNLEKARLAFERALELDPKCVGALVGLAILELNQHDAESIRTGVQLLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF  ++  V QL   A   T +   ++ S Y LARS+H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKEYAKVLQLALHAFHNTENEAMRAESCYQLARSFHVQGDYDQA 178



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 312 DFRSALTNFEKVLEIYPDNCE--TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           D+R AL  ++K L     NC       +GH +V+LG +EKA+    +A ++DP+   A +
Sbjct: 31  DYRGALAFYKKALRT-NGNCPAGVRLGMGHCFVKLGNLEKARLAFERALELDPKCVGALV 89

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKA--GEEVPIEVLNNIGVIHFEKGEFESAHQ 424
            L  L ++       ++ +T   LL KA   +     VLN++    F K E+    Q
Sbjct: 90  GLAILELNQHDA---ESIRTGVQLLSKAYTIDSTNPMVLNHLANHFFFKKEYAKVLQ 143


>gi|262302885|gb|ACY44035.1| SH2 domain binding protein [Aphonopelma chalcodes]
          Length = 178

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 115/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALVFYKKALRTNPKCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            YKLG++ KAR AF+RALQLD + V ALV LAV++L       IR G++ + +A+ I   
Sbjct: 61  FYKLGKIDKARLAFERALQLDSQCVGALVGLAVLELNLKSPEAIRNGVQMLSKAYTIDLT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LARS+H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQLARSFHIQNDYDQA 178


>gi|195586887|ref|XP_002083199.1| GD13607 [Drosophila simulans]
 gi|194195208|gb|EDX08784.1| GD13607 [Drosophila simulans]
          Length = 612

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 189/354 (53%), Gaps = 29/354 (8%)

Query: 523 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGK 581
           +A+ +  + ++ +   +AL +N   P+A S+LG+L L    +   ++ F     + +   
Sbjct: 1   MARDKGLIFVASDFFKDALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPSTST 60

Query: 582 DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 641
           D+Y+ ++LGN++    L    R  + E  H EKA  ++ +V+     N++A NG G VLA
Sbjct: 61  DAYSLIALGNFS-LQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLA 119

Query: 642 EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 701
            KG    ++D+F QV+EA +        DVW+N+AHVY  Q  +  A++MY+NC++KFY 
Sbjct: 120 HKGCVIEARDIFAQVREATAD-----FCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYK 174

Query: 702 NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTR 761
           + + +++ YLAR +  A +  D K  LL+A  +AP +  L F+  V + + + + L   +
Sbjct: 175 HNNVEVMQYLARAYLRANKLVDAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILIDEK 234

Query: 762 RTADEVRSTVAELENA-VRVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAK 815
            T + V   V ELE A  + F +LS      +HG D+ + N  V       C+ LL  A+
Sbjct: 235 STLEIVLQAVHELELAQSKYFQYLS------VHG-DKNRFNIEVAGIEASTCQDLLSQAQ 287

Query: 816 IHREAAER---EEQQNRQRQEAARQA---ALAEEARRKAEEQKKY---LLEKRK 860
            H   A R   EE+  R++QE  R+A    +AE+ +R+ EE K     LL KR+
Sbjct: 288 YHVGRARRIDEEERSLRRKQEEEREAFKIKVAEQRKRREEEAKTSRDQLLAKRQ 341


>gi|262302925|gb|ACY44055.1| SH2 domain binding protein [Idiogaryops pumilis]
          Length = 174

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 111/174 (63%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +PSCP  +RLG+G C YKL
Sbjct: 1   FNFVLNQSSNNIPSLLGKACIAFNKKDYKGALTFYKKALRTNPSCPADVRLGMGHCFYKL 60

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
            +L KAR AF+RAL+LD + V ALV LAV+ +       IR G++ + +A+ I P   M 
Sbjct: 61  NRLEKARLAFERALELDSQCVGALVGLAVLSINEGSTDSIRSGVQMLSKAYSIDPTNPMV 120

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           LN+LANHFFF   H  V  L   A   T +   ++ S Y LARS+H + DY++A
Sbjct: 121 LNHLANHFFFKRDHTKVHNLALHAFHKTENEAMRAESCYYLARSFHIQEDYDQA 174



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 6/126 (4%)

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKI 360
           G   +     D++ ALT ++K L   P     ++  +GH + +L ++EKA+    +A ++
Sbjct: 17  GKACIAFNKKDYKGALTFYKKALRTNPSCPADVRLGMGHCFYKLNRLEKARLAFERALEL 76

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGE 418
           D +   A + L  L I+     + D+ ++   +L KA    P    VLN++    F K +
Sbjct: 77  DSQCVGALVGLAVLSINE---GSTDSIRSGVQMLSKAYSIDPTNPMVLNHLANHFFFKRD 133

Query: 419 FESAHQ 424
               H 
Sbjct: 134 HTKVHN 139


>gi|262302953|gb|ACY44069.1| SH2 domain binding protein [Peripatus sp. 'Pep']
          Length = 178

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 115/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSSNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPDCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG++ KAR AF+RALQLD + V ALV LA+++L   +   IR G++ + RA+ I   
Sbjct: 61  FVKLGKMDKARLAFERALQLDSQCVGALVGLAILELNNKQPDSIRNGVQMLSRAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQLARAFHVQNDYDQA 178


>gi|19115532|ref|NP_594620.1| RNA polymerase II associated Paf1 complex subunit Tpr1
           [Schizosaccharomyces pombe 972h-]
 gi|26400735|sp|O42668.1|TPR1_SCHPO RecName: Full=Tetratricopeptide repeat protein 1
 gi|2664248|emb|CAA15833.1| RNA polymerase II associated Paf1 complex subunit Tpr1
           [Schizosaccharomyces pombe]
          Length = 1039

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 231/953 (24%), Positives = 409/953 (42%), Gaps = 131/953 (13%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNA-LGVYYTYLGKIETKQRE-- 60
           EY+ +G  EQ   IL+ G     D        E + ILNA +   Y  + +    +++  
Sbjct: 60  EYYIRGLREQAILILKSGLETLKDS-------ESLCILNANIAAIYLSMAREAMLKKDTD 112

Query: 61  -KEEHFILATQYYNKASRIDMHEPSTWVGKG--QLLLA---KGEVEQASSAFKIVLEADR 114
            ++E       Y   A+ ID       +  G  ++LL    K  +E A+  F  VL+   
Sbjct: 113 LRDEQLRNVRTYLEAANNIDSKSEINVLLHGIYRILLNPTDKESLENAARCFDFVLQKSG 172

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
            N+   LG+A + + +G Y  +L+ Y+RAL  +P      R+GIGLC + L     A  A
Sbjct: 173 GNILGFLGKARILYAKGNYRSALKLYQRALVSNPQFKPDPRIGIGLCFWNLDMKTDALSA 232

Query: 175 FQRALQLDPEN--VEALVALAVMDL---QANEAAGIR---KGMEKMQRAFEIYPYCAMAL 226
           + R  QLDP+N  V+  + L   DL     N  + ++   K ++ +QRAF+      +A 
Sbjct: 233 WTRVQQLDPKNTVVDTYIGLYYYDLAFQNVNNDSFVQNYGKALQHIQRAFKTRNNDPVAS 292

Query: 227 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
           + L  + +    +    +L E  +  +      +  YY + R+YH  G+ EKA   Y  +
Sbjct: 293 SILERYVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRAYHQMGNNEKAMASYQKA 352

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
            K  +  H  +    G+GQ+Q+   D  SA   FE++ E      E L  LG ++    +
Sbjct: 353 -KAADDRH--LLSSVGIGQIQILQNDLTSAKLTFERIAEQNQSCFEALVVLGCLHASDSK 409

Query: 347 --IEKAQELLRKAAKID-----PR--DAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 397
             + KA+ LL +A  +      PR  D+  +I    L    DT  +L     A   L+ A
Sbjct: 410 PDLTKARMLLDRAFNLVGSSKLPRVVDSDLYITQARLWEKEDTKKSLGFLTRALDFLESA 469

Query: 398 GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
              V  E+LNNI V+ +  G    AH       G+ I       K K+ + DA+  +   
Sbjct: 470 HMSVGPELLNNIAVLQYHLGLIPEAH-------GNII-------KAKSVLPDANPELSLL 515

Query: 458 KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
            D                        +NLAR  E++ +T  AS  Y  IL K+  ++DA 
Sbjct: 516 LD------------------------YNLARCEEELGNTSVASEAYVSILEKHPSFIDAR 551

Query: 518 LRLAAIAKARNNLQLSIELV------NEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 571
           +R   +  +  N +   E+       ++ L+V   +   LS      +++ +     +T 
Sbjct: 552 IRKCLLQLSNPNEETFKEIRHIMNADSQNLEVRAFFGWYLSKQKRRPVEDPEVRHCSQTL 611

Query: 572 RAASDATDGKDSYATLSLGNWNYFAA----LRNEKRAPKLEATHLEKAKELYTRVIVQHT 627
           R   D     D Y+ + LGN     A    + N++   K +  ++ KA + Y + I    
Sbjct: 612 RHWHD-----DIYSLVQLGNAYMRQAREFRVHNDREKLKRQKLYI-KAIQSYDQAIKFDP 665

Query: 628 SNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 687
            N +AA G  ++LA+  QF  +  + ++V+EA   +  +      IN+ +       F+ 
Sbjct: 666 KNAHAAQGIAIILAQNRQFSKALLILSKVREAIKDATTL------INIGNCLAELKQFSR 719

Query: 688 AMKMYQNCLRKFYYNTDAQILLYLARTHYE---AEQWQDCKKSLLRAIHLA----PSNYT 740
           A+++++        +    +L  L R   +     +  D  K  +R   LA    P N +
Sbjct: 720 AIEVFETVYSSTGESDTYGVLSCLGRVWLQRGRESKNVDYLKESVRYATLALEKNPENPS 779

Query: 741 LRFDAGVAMQKFSASTLQKTR----RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD 796
           L F+  VA  +F    L + +    RT +++   + +L+ ++  F+ L +          
Sbjct: 780 LLFN--VAFVQFQLCELIRQKPENSRTVEDLNFAMQQLDASIETFTKLVSVE-------- 829

Query: 797 EKKINTHVEYCKHLLDA-AKIHREAAEREEQQNRQRQEAARQ--AALAEEAR--RKAEEQ 851
                 H  Y    ++  AK+ +   +R+ ++  Q Q    +  AA  E+AR  R+ E+ 
Sbjct: 830 ------HPPYSPTSIEQRAKMAKNTTKRQLERAIQAQIEYEKSVAAKLEDARIQREKEKA 883

Query: 852 KKYLLEKRKLEDEQKRLRQQEEHFQRVKE---QWRSSTPASKRRERSENDDDE 901
           ++   E+  L+++Q+R RQ +E  Q+++E   +WR S   +   + S +DD+E
Sbjct: 884 RRLAEEEALLKEKQERERQLQEERQKMQEEVLEWRKSQQKASEDDMSLSDDEE 936


>gi|262302915|gb|ACY44050.1| SH2 domain binding protein [Ephemerella inconstans]
          Length = 178

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 114/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL   ++N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSQNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAGVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   +AR AF+RALQLD   V ALV LAV+ L    A  IR G++ + +A+ I P 
Sbjct: 61  FMKLGNQDRARLAFERALQLDASCVGALVGLAVLQLNEQTADAIRTGVQMLSKAYTIDPT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S + LARS+H +GDY+++
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCFQLARSFHVQGDYDQS 178



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 8/135 (5%)

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE--TLKALGHIYVQLGQI 347
           +N+    I    G   +     D+R AL  ++K L   P NC       +GH +++LG  
Sbjct: 9   LNQSQNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNP-NCPAGVRLGMGHCFMKLGNQ 67

Query: 348 EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--V 405
           ++A+    +A ++D     A + L  L ++  T    DA +T   +L KA    P    V
Sbjct: 68  DRARLAFERALQLDASCVGALVGLAVLQLNEQTA---DAIRTGVQMLSKAYTIDPTNPMV 124

Query: 406 LNNIGVIHFEKGEFE 420
           LN++    F K ++ 
Sbjct: 125 LNHLANHFFFKKDYS 139


>gi|346324770|gb|EGX94367.1| RNA polymerase II transcription elongation factor Ctr9, putative
            [Cordyceps militaris CM01]
          Length = 1192

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 241/982 (24%), Positives = 411/982 (41%), Gaps = 141/982 (14%)

Query: 56   TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS------------ 103
            ++ + KE +  LAT   N A+R++   P  ++ +G LLL +  ++  S            
Sbjct: 140  SEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKQE 199

Query: 104  ---SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IR 155
               +A K   +A R     N+ AL+G+A   F+  +Y DSL  Y+  LQ  P       R
Sbjct: 200  LLKTAVKSFDDALRVSQGKNMLALMGKARAFFSLQKYPDSLAIYQDVLQKKPDLVDPDPR 259

Query: 156  LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------R 206
            +GIG C ++LG    A+ A++R+L++ P++  A + L +  L A+    +         +
Sbjct: 260  IGIGCCFWQLGFKKDAKTAWERSLEITPDSKVANILLGLYHLDASGHVPVNSEDFVKLYK 319

Query: 207  KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
            K M E  Q++F++     +  +  +N+F         ++L   A+  T+     S  +Y 
Sbjct: 320  KAMTEYTQKSFKLDKDLPLTCSTFSNYFLSRKSWDNADKLAHKAIQYTDVNAIASDGWYV 379

Query: 266  LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVL 324
            LAR  H  GD E A  +Y  +           FP  +G  Q+ +   D   A    EK++
Sbjct: 380  LARKAHYHGDTENANDFYRRADDARGGTDTGYFPAKFGAAQLSVMKNDLGEAKLRLEKMI 439

Query: 325  EIYPDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAK-----IDP 362
            +    + E +  LG +Y +                +++KA  LL   R A K     I P
Sbjct: 440  Q-QSKSHEAMILLGTLYAEEIFANQASDAKEDKSAEMKKAINLLEAVRSAWKNAKRNISP 498

Query: 363  RDAQAFIDLGELLISSDTGAALDAFKTARTL----------LKKAGEE----------VP 402
             DA   ++L  L  + +   AL   +    L           +   EE          +P
Sbjct: 499  -DASVLLNLARLYETDNPEKALQCLQQVEQLELEQIPSSEYPEGVTEEAEVQTAIRKFLP 557

Query: 403  IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
             ++LNNIG  HF+  +   A + F+ ALG  + ++  DS   T  + +S S         
Sbjct: 558  PQLLNNIGCFHFQAEKHVLASEMFEAALGACLKMSEKDSTVDTDALVSSIS--------- 608

Query: 463  FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                                 FNL R  E    +  A  +Y  +L ++ DY DA  RLA 
Sbjct: 609  ---------------------FNLGRSYESQGLSDKAVEVYESLLNRHDDYADARARLAY 647

Query: 523  IAKARNNLQLSIELVNEALKVNGKYPNALSM----LGDLELKNDDWVKAKETFRAASDAT 578
            I   ++  +   + V +  + N       ++    LG L  K    +     FR      
Sbjct: 648  IKLRQSPNKEGPDAVAKLYQDNPSDVEVRALYGWYLGKLSRKRPGNIVEDPEFRHYKHTL 707

Query: 579  ---DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHTSNLYA 632
               D  D YA + +GN +   A  +R E  A K + +    KA E Y + +     N YA
Sbjct: 708  QNYDKHDRYALVGMGNLHMMQAREMRRETDADKQKRSAAYGKAVEFYEKALSLDPKNAYA 767

Query: 633  ANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 691
            A G  + L E K  +  +  +F +V++       ++ P +++NL H+Y     F+ A++ 
Sbjct: 768  AQGVAIALVEDKKDYKNALAIFNKVRDT------IREPSLYVNLGHIYAELKQFSKAIES 821

Query: 692  YQNCLRKFYYNTDAQILLYLARTHYE---AEQWQDCKKSLL----RAIHLAPSNYTLRFD 744
            Y+  L K   + D  IL  L RT      AE+  D     L    +A+ +AP     +F+
Sbjct: 822  YEIALSKEGKHNDPVILACLGRTWLNRGRAERDIDAYGKALECAEKALEVAPDQVHYKFN 881

Query: 745  AGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKIN 801
                  +   +   LQ+ RRTA+++      LE A+     ++A         D E++ N
Sbjct: 882  VAFVQIQLVTTIQGLQENRRTAEQLEKAAKGLEAAIESLDAIAAHPQTPYPKHDVEQRAN 941

Query: 802  THVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKL 861
                  +  L+ A I ++  +  E+ N+++  AA+    AE  RR+A+  +  +L K K 
Sbjct: 942  MARNTLRKQLERA-IGKQ--KEWEEVNKEKIAAAQSQREAELKRREAD--RAAILAKEK- 995

Query: 862  EDEQKRLRQQEEHFQRVK---EQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKK 918
            E + K  +++EE   +VK   E+      A + R+  E  +DE G+  KR+RK   R   
Sbjct: 996  ERQDKIRKEREEMAAQVKLETEERERELEAERTRKEGELTEDEEGNKVKRKRKPAPRAPG 1055

Query: 919  DKSSRSHYETEYAEADMMDYRE 940
            +  S+   + + A+ D  D  E
Sbjct: 1056 EGRSKRSSKKKGAKDDDEDSDE 1077


>gi|241957027|ref|XP_002421233.1| Paf1 complex subunit, putative; RNA polymerase-associated protein
           Ctr9 homologue, putative [Candida dubliniensis CD36]
 gi|223644577|emb|CAX40565.1| Paf1 complex subunit, putative [Candida dubliniensis CD36]
          Length = 1086

 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 217/885 (24%), Positives = 378/885 (42%), Gaps = 144/885 (16%)

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSC 150
           L L + + + A   F  +L  D +N  ALLG+A    N+ + YS +L+ Y++ L ++P  
Sbjct: 155 LYLYESKDDDAIDIFDRILRLDPNNCFALLGKAQSVLNKTKNYSHALKLYQQVLILNPLM 214

Query: 151 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI----- 205
               RLGIGLC + L     A +A++R+LQLDP NV++ + L +          +     
Sbjct: 215 KPDPRLGIGLCFWFLRDDKMAIKAWERSLQLDPTNVKSRIFLNLAKFHTTFTNSLSDEEF 274

Query: 206 ----RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA-VTNHGPTKS 260
               +  ++++ +   +       +  L ++ F  G +  V ++ E  +  +T     K 
Sbjct: 275 LDNYKNCLQELSKLKSLNADDTTVILALCSYLFSKGDYNTVIKIVEKIVKKITGSDNLKK 334

Query: 261 HSYYN----------------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
            S ++                LAR   ++GD+ ++  Y+  ++K +N+ +  I    GLG
Sbjct: 335 FSTFSRITKYESNVLSQCSTWLARIEFARGDFIQSSKYFQEAIK-LNESN--IVAKLGLG 391

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLRKAAKI- 360
           Q Q   G    A   FE +L       E   +LG +Y +     + E A ++L +  ++ 
Sbjct: 392 QSQYNRGSTEEASLTFESILRSNVKCLEVNYSLGVLYSKQNSRSKKEMAIQVLERYIRLS 451

Query: 361 ----------------DPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPI 403
                           +P    A++ L +L     D+  AL     A    K+  ++VP+
Sbjct: 452 NNRGISSNEEEFVLNKEPVALNAYLILSQLYEEKGDSIQALTYLNKAVEARKQVEKDVPL 511

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
           EV NNIGV  F K  ++SA  +F  ALG                +D S     FK     
Sbjct: 512 EVYNNIGVFQFTKQNYDSALDNFTAALGK---------------LDGS----DFKSP--- 549

Query: 464 HRFENDGNH-VELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                DG+  V+LP + + ++ +NLAR  ++I +   A   Y  +L +  +Y  A LR+ 
Sbjct: 550 -----DGDTLVDLPQDLRTSLTYNLART-KEISNQKDALETYEQLLTECPNYFSAKLRIL 603

Query: 522 -------AIAK--ARNNLQLSIELVNEALKVNGKYPNALSMLG---------DLELKNDD 563
                   I+K   RN ++  +EL    L+V   Y   +   G         D +L+ D 
Sbjct: 604 FLNCLTEGISKEEIRNEIEQLLELNASDLEVRSFYGWFIKNFGKRLHMPSDADTKLQKDT 663

Query: 564 WVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVI 623
            V+            D  D YA +SL N  Y    R+ K A +    +  +A EL+T+V+
Sbjct: 664 LVE-----------FDSHDCYALISLANI-YCIMARDAKGADEKRKKYYLRAIELFTKVL 711

Query: 624 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 683
              + N+YAA G  +   E  Q +   D+  +++++ +         V++NL HV     
Sbjct: 712 SLDSKNVYAAQGLAITYIENKQLNKGLDILRKIRDSLND------ISVYLNLGHVLCDLK 765

Query: 684 NFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRF 743
            F  A++ Y+  L ++    DA+IL +L R  Y     +     L +A+  A + +    
Sbjct: 766 QFGKAIENYELALARYTDGKDAKILSFLGRVWYLRGNAESSLAYLKKALEYAQAAFDAAR 825

Query: 744 DAGVAMQKFSASTLQ-----------KTRRTADEVRSTVAELENAVRVFSHLSAASNLH- 791
               A   F+ S +Q              R  D++ S +  L NA+ + + L++    H 
Sbjct: 826 TTSKAALSFNISFVQFQIADFITKQPVNERNVDDIESAIEGLNNAIDILTQLASDEEKHP 885

Query: 792 ------LHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE-A 844
                 L G      +T +    + L  A+     AE EE     + E A+Q  + EE  
Sbjct: 886 PYPREELRGRANLGTSTLLSRLGNAL--AETKENNAEIEE-----KIEKAKQIRMEEEQT 938

Query: 845 RRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPAS 889
           R K EE++   L++++LE  ++R+  QE+  Q+  E+ R+S   S
Sbjct: 939 RLKEEEERLNKLKEKELEMSKQRMALQEQA-QKWAEENRASVGVS 982


>gi|157939605|gb|ABW05527.1| SH2 domain binding protein [Mesocyclops edax]
          Length = 179

 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 117/179 (65%), Gaps = 2/179 (1%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGR--YSDSLEFYKRALQVHPSCPGAIRLGIG 159
           A++ F  VL  + +N+PALLG+AC+ +N  +  Y  +L FYK+AL+ +P+CP ++RLG+G
Sbjct: 1   ANAQFDFVLNQEPNNIPALLGKACIAYNGSKKDYKGALAFYKKALRTNPNCPASVRLGLG 60

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
           LC YKLG   KAR AF+RA +LDP  V A+V  A++DL A +   I++G+ K+ +A+ I 
Sbjct: 61  LCYYKLGNEAKARMAFERAQELDPNCVGAIVGQAILDLNAQKTVAIQEGVRKLSKAYTID 120

Query: 220 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
           P   M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + D+ +
Sbjct: 121 PSNPMVLNHLANHFFFKKDYTKVQHLALHAFHNTENEAMRAESCYQLARAFHVQNDFTQ 179


>gi|262302955|gb|ACY44070.1| SH2 domain binding protein [Polyzonium germanicum]
          Length = 178

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 115/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  +  SL FYK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDHRGSLAFYKKALRTNPNCPADVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG+  KAR AF+RALQLDP+ V ALV LA+++L +     IR G++ + +A+ I   
Sbjct: 61  FVKLGKPDKARLAFERALQLDPQCVGALVGLAILELNSKTTDSIRHGVQMLSKAYTIDSS 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LARS+H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAFHNTENEAMRAESCYQLARSFHVQNDYDQA 178



 Score = 43.5 bits (101), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 10/114 (8%)

Query: 312 DFRSALTNFEKVLEIYPDNC--ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           D R +L  ++K L   P NC  +    +GH +V+LG+ +KA+    +A ++DP+   A +
Sbjct: 31  DHRGSLAFYKKALRTNP-NCPADVRLGMGHCFVKLGKPDKARLAFERALQLDPQCVGALV 89

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNNIGVIHFEKGEFE 420
            L  L ++S T    D+ +    +L KA       P+ VLN++    F K +++
Sbjct: 90  GLAILELNSKTT---DSIRHGVQMLSKAYTIDSSNPM-VLNHLANHFFFKKDYQ 139


>gi|262302951|gb|ACY44068.1| SH2 domain binding protein [Periplaneta americana]
          Length = 178

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 114/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+ +PSCP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDFRGALAFYKKALRTNPSCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RALQLD + V ALV LA++ L   +   IR G++ + +A+ I   
Sbjct: 61  FMKLGNQDKARLAFERALQLDAQCVGALVGLAILKLNQQQPESIRTGVQMLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQA 178


>gi|448117162|ref|XP_004203188.1| Piso0_000789 [Millerozyma farinosa CBS 7064]
 gi|359384056|emb|CCE78760.1| Piso0_000789 [Millerozyma farinosa CBS 7064]
          Length = 1092

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 225/961 (23%), Positives = 403/961 (41%), Gaps = 177/961 (18%)

Query: 60   EKEEHFILATQYYNKASRIDM--HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 117
            EK  +  LA Q  N+ S+      + S  + K  L L + +VEQ+   F  VL+++ +N 
Sbjct: 115  EKGNNLNLAQQGINELSKAGSVSGDISYLLSKAVLHLYRDDVEQSLDTFDAVLKSNYNNC 174

Query: 118  PALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 176
             A+LG+A +  N+ + Y+++L+ Y++ L ++P      R+GIGLC + L     A +++Q
Sbjct: 175  FAILGKAHIILNKTKNYANALKLYQQVLILNPLMKPDPRIGIGLCFWFLKDEKMAIKSWQ 234

Query: 177  RALQLDPENVEALVALAVM-------------DLQANEAAGIRKGMEKMQRAFEIYPYCA 223
            RAL++DP+N +A + L +              D ++N  A + + +     A    P   
Sbjct: 235  RALEIDPQNFKAKILLNLAEFNTAFNYSLNDDDFKSNYQACLNQVVTIYYEA----PNDI 290

Query: 224  MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK-----------------SHSYYNL 266
              L  LA+++F    + +V++L E  +   +                      S +   L
Sbjct: 291  SVLLTLASYYFSKENYDVVQKLCEKVIGEVSESANSGKTSSSSKLSKFQSNVLSQTALWL 350

Query: 267  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
             R + +K D+ +A  Y+  ++K +N+ +  +    GLG  Q+  G    A   FE +L+ 
Sbjct: 351  GRVFFAKLDFIQAQKYFHEAIK-LNENN--LLAKLGLGHSQINRGSTEEATITFESILKT 407

Query: 327  YPDNCETLKALGHIYV--------QLG-QI-------------------EKAQELLRKAA 358
             P   E    LG +Y         +LG QI                   E++ ELL K  
Sbjct: 408  NPKCSEVNYCLGMLYAKHKSRRKQELGIQILERYIRLCNNRGLSDNKNEEESLELLNK-- 465

Query: 359  KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
              +P    A++ L  L  S D   +L+  K A    ++  ++VP+E+ NNIGV  F K  
Sbjct: 466  --EPVILNAYLTLSRLYESRDINQSLNYLKKAIESRRQIKQDVPLEIYNNIGVFQFLKSN 523

Query: 419  FESAHQSFK---------DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 469
            +  + ++FK         D+  D     L+D K+                          
Sbjct: 524  YSESSENFKKSYEKLEAADSFTDETGDVLMDLKSDL------------------------ 559

Query: 470  GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL----AAIA- 524
                     KVT+ FNL R  ++I +   A  +Y  +L +   Y  A LRL      IA 
Sbjct: 560  ---------KVTLSFNLGR-SKEISEQSEAIEIYNGLLKECPHYFSAKLRLLFLNCLIAD 609

Query: 525  KARNNLQLSIELVNEALKVNGKYPNALSMLG--------DLELKNDDWVK-AKETFRAAS 575
             A++ ++   E V E L ++       S  G         L +K DD  K  K+T     
Sbjct: 610  SAKDKIK---EEVEEMLTISASDLEIRSFYGWFSKNFGKKLGMKPDDDTKHQKDTLV--- 663

Query: 576  DATDGKDSYATLSLGNWNYFAALRNEKRAPKLE--ATHLEKAKELYTRVIVQHTSNLYAA 633
               D  D YA LSL N  Y    R+ K + + E    +  +A EL+++V+     N++ A
Sbjct: 664  -EYDSHDCYALLSLANI-YCIMARDIKGSSQDEKKKKYYIRAIELFSKVLSVDPKNVFGA 721

Query: 634  NGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 693
             G  +V  E  + +   +L  +++++ +         V++NL HV      FA +++ Y+
Sbjct: 722  QGLAIVYIENKELNKGLELLRKIRDSLND------ISVYLNLGHVMLELKQFAKSIEHYE 775

Query: 694  NCLRKFYYNTDAQILLYLARTHYEAEQWQD-----------CKKSLLRAIHLAPSNYTLR 742
              L ++    D +IL +L R  Y     +            C+++L     L  S     
Sbjct: 776  IALMRYSNGNDPKILSFLGRAWYMRGMSEKNLSFMNTALSYCERALSLTTGLKSS----- 830

Query: 743  FDAGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEK 798
            F   +A  +F      + L   +R  ++++  +  L+ A+   + L++    H   + + 
Sbjct: 831  FKFNIAYVQFQIAELVTKLPVEQRKVEDIKEAITNLQKAIESLNELASDEEKH-PPYPKS 889

Query: 799  KINTHVEYCKH-LLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLE 857
             + +      + LL+      EA     QQ+ QR E A++    E AR + EE++     
Sbjct: 890  DLKSRASLGTNTLLNRLNTCLEATIENVQQSEQRMEEAKRLREEERARIQREEEEA---- 945

Query: 858  KRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSEND----DDEVGHSEKRRRKGG 913
            + K  + ++ L ++    Q   +QW  +  A      SE+D    D+E   ++K+ +K  
Sbjct: 946  RAKQREREEELAKERAALQEQAKQW--AEEARMNVVESEDDDRLFDEESAANDKKSKKAS 1003

Query: 914  K 914
            +
Sbjct: 1004 Q 1004


>gi|262302967|gb|ACY44076.1| SH2 domain binding protein [Scutigerella sp. 'Scu3']
          Length = 178

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 114/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+A++ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKAIRTNPKCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG+  KA+ AF+RALQLD + V ALV LAV+ L      GI+ G++K+ +A+ I   
Sbjct: 61  FLKLGKQDKAKLAFERALQLDAQCVGALVGLAVLALNNKTPEGIKDGVQKLSKAYSIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR +H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLARHAFHNTENEAMRAESCYQLARDFHVQGDYDQA 178


>gi|262302903|gb|ACY44044.1| SH2 domain binding protein [Cryptocellus centralis]
          Length = 178

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 115/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            +KLG+  +AR AF+RALQLD + V ALV LA+++L       IR G++ + RA+     
Sbjct: 61  FHKLGKHDRARLAFERALQLDSQCVGALVGLAILELNNKTPDSIRNGVQMLSRAYATDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LARS+H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFQNTENEAMRAESCYQLARSFHIQGDYDQA 178


>gi|262302907|gb|ACY44046.1| SH2 domain binding protein [Dinothrombium pandorae]
          Length = 178

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/178 (44%), Positives = 115/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP  +RLGIG C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKEYRPALAFYKKALRHNPYCPADVRLGIGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            YKLG+  KA+ AF+RALQLD   V ALV LA+++L       IR+G++ + +A+ I P 
Sbjct: 61  FYKLGKPEKAKLAFERALQLDTRCVGALVGLALLELNQKTNESIRRGVQMLSKAYTIDPT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 DPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQLARAFHIQGDYDQA 178


>gi|262302899|gb|ACY44042.1| SH2 domain binding protein [Ctenolepisma lineata]
          Length = 178

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/178 (44%), Positives = 113/178 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFDFVLNQSPNNIPSLLGKACIVFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RALQLDP  V ALV LA++ L   +   IR G++ +  A+ I   
Sbjct: 61  FMKLGNQEKARLAFERALQLDPHCVGALVGLAILKLNQQQPESIRTGVQMLSMAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYMLARAFHVQGDYDQA 178


>gi|358373303|dbj|GAA89902.1| RNA polymerase II transcription elongation factor [Aspergillus
            kawachii IFO 4308]
          Length = 1209

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 246/1008 (24%), Positives = 416/1008 (41%), Gaps = 184/1008 (18%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ T+ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 134  GELYTEAKTKDHYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVD 193

Query: 99   ----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   PS 
Sbjct: 194  TSERVESLRQALKCFDESSKAFGGRNVMAILGRARTQYLLGRYAEALEGYQKVLMKMPSL 253

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A
Sbjct: 254  TDPDPRIGIGSCLWQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPA 313

Query: 203  AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G   +  M +  Q+AF++     M  +    +F     +  VE L   A+  T+     
Sbjct: 314  FGSLYKVAMTQYTQKAFKLDKEYPMTCSLFGGYFLLRKAYSTVETLARKAIEHTDVMQIA 373

Query: 260  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
            S  +Y L R  H +GD  +A  YY  S +      +   P  +G  Q+Q+   DF  A  
Sbjct: 374  SDGWYLLGRKSHYEGDLTRAAEYYNRSDQARGGGEKGYLPAKFGTVQMQVSNKDFDGAKF 433

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--------K 356
              EK+++    N E +  LG ++ +                +I+KA  LL         +
Sbjct: 434  RLEKIIQ-QTKNAECMVLLGALHAEEVFAAQRSGSKEDKSAEIKKAINLLESVRALWKDE 492

Query: 357  AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE--------------- 400
              KI P D    + L  L   S    ++        + L +  EE               
Sbjct: 493  TKKISP-DESVLVYLARLYEQSAPEKSMQCLTQLEEMQLAEVAEEERPEGVEDEEQVKAA 551

Query: 401  ----VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
                +P ++LNN+G   ++  + E A   F+ AL        + SK K   +D  A +  
Sbjct: 552  LRVHLPPQLLNNMGCFLYQAEKIERARTMFQAALD-----ACVRSKEKESELDTDALV-- 604

Query: 457  FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 516
                                    T+ FNL R  E       A  +Y+ +L ++ DY +A
Sbjct: 605  -----------------------TTISFNLGRTYEAADMPEEAKKVYQGLLERHADYTEA 641

Query: 517  YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAAS 575
              RL  IA       L     +E  K   K   A S   +LE++    W  +K   RAA+
Sbjct: 642  NARLTYIA-------LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAAN 692

Query: 576  DATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKEL 618
             A D +              D Y+   +GN +   A  +R +    K +   + E+A E 
Sbjct: 693  LAEDHEQRHYKHTLQYYDKHDRYSLTGMGNIHLSTARDMRRDSDQDKEKRRKMYERAVEF 752

Query: 619  YTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
            + + +     N YAA G  + L + K     +  +F+++++       ++   V++NL H
Sbjct: 753  FDKALQLDPRNAYAAQGIAIALVDDKKDHASAVHIFSKIRDT------LRDASVYLNLGH 806

Query: 678  VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSL---LR 730
            VY     +  +++ Y+  L K     DAQIL  L R       +    Q  K +L    R
Sbjct: 807  VYAELRQYTRSIEHYEAALSKDRAR-DAQILACLGRVWLAKGKQEMNLQAMKTALDYAQR 865

Query: 731  AIHLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAAS 788
            A  +AP    L F+      + ++ T  L +T++T  +V+     L+ AV  F+ ++ A 
Sbjct: 866  AHSVAPGQVHLEFNVAFVQNQIASLTYGLPETQKTVQDVQDAAEGLQQAVETFNRVAQAK 925

Query: 789  NL-HLHGFDEKKINTHVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAAR 836
            N  +     E++ N      K L  A +  +E           A E  E + RQR+E  R
Sbjct: 926  NPPYPSSALEQRANMGRTILKQLERALQSQKEYEEKNAAKLQQAREAREAEKRQREEEVR 985

Query: 837  QAALAEEAR--RKAEEQKKYLLEKRKLEDEQKR---------LRQQEEHFQRVKEQWRSS 885
            +A  AE  R  R AEE+++ + E ++L +++           L  + E   +VK + R++
Sbjct: 986  KAQEAERERKQRVAEERQRMIEEAQRLAEQRAEEERAREEAELTTESETGAKVKRKKRTT 1045

Query: 886  TPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEA 933
               S +R++  N+DD +         GG    +++SS    + E A A
Sbjct: 1046 ---STKRKKKRNEDDFIND-------GGDSPSRERSSEPDSDGEAAAA 1083


>gi|322699017|gb|EFY90782.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Metarhizium acridum CQMa 102]
          Length = 1178

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 278/1100 (25%), Positives = 448/1100 (40%), Gaps = 207/1100 (18%)

Query: 56   TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS------------ 103
            ++ + KE +  LAT   N A+R++   P  ++ +G LLL +  ++  S            
Sbjct: 138  SEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKNE 197

Query: 104  ---SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAI 154
               +A K   +A R     N+ AL+G+A   F+  +Y D+L  Y+  L   P    P   
Sbjct: 198  LLKTAVKSFDDALRVSQGKNMLALMGKARAYFSMHKYPDALATYQDILHKMPDLVDPDP- 256

Query: 155  RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
            R+GIG C ++LG    A+ A++R+L+++PE+  A + L +  L A+    +         
Sbjct: 257  RIGIGCCFWQLGFKEDAKVAWERSLEINPESKIANILLGLFYLDASGHVPVNSDEFLKLY 316

Query: 206  RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
            RK M E  Q++F++     +  +  A +F         E+L   A+  T+     S  +Y
Sbjct: 317  RKAMTEYTQKSFKLDKEVPITCSTFAGYFLSRKAWENAEKLAHKAIQYTDVNAIASDGWY 376

Query: 265  NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKV 323
             LAR  H   D EKA  YY  +            P  +G+ Q+ +   D   A    EK+
Sbjct: 377  LLARKAHYNDDTEKASDYYRRADDARGGADTGYLPAKFGVAQLSVLKNDLGEAKLRLEKM 436

Query: 324  LEIYPDNCETLKALGHIYVQ---LGQ-----------IEKAQELL---RKAAKIDPR--- 363
            ++    N E +  LG +Y +    GQ           ++KA  LL   R A K DP+   
Sbjct: 437  IQ-QSKNHEAMILLGTLYAEEIFAGQKSDSKEDKSAEMKKAITLLESVRNAWK-DPKRTI 494

Query: 364  --DAQAFIDLGELLISSDTGAALDAFKTARTLL--------------KKAGEEV------ 401
              DA   ++L  L        AL   +    L                +A  +V      
Sbjct: 495  APDASVLLNLARLYELDQPEKALQCLQQVEQLELDQIPKSERPTDTENEAAAQVEMRKLL 554

Query: 402  PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
            P ++LNNIG  H +  + E A + F+ AL   +    +  K  +   DA  S        
Sbjct: 555  PPQLLNNIGCFHSQAEKHELASEMFEAALSACM---RIGEKEPSMDTDALVS-------- 603

Query: 462  LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                               ++ FNL R  E    T  A  +Y  +L ++ DY DA  RLA
Sbjct: 604  -------------------SISFNLGRSYESRGLTDKAMEVYEGLLARHDDYTDARTRLA 644

Query: 522  AIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKND-DWV--KAKETFRA 573
             I K R N              N + P+A++ L      DLE++    W   K     R 
Sbjct: 645  YI-KLRKN-------------PNKEGPDAVAKLYQENTSDLEVRALYGWYLGKVHSRKRP 690

Query: 574  ASDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAK 616
            A+   D +              D YA + +GN     A  +R E  + K + + +  KA 
Sbjct: 691  ANIVEDPEFRHYKHTLQNYDKHDRYALIGMGNLYLLQAREMRRETESDKQKRSVIYGKAV 750

Query: 617  ELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
            E + + +     N YAA G  + L E K  +  +  +F +V+E       V+ P V++NL
Sbjct: 751  EFFEKALSLDPKNAYAAQGVAIALVEDKKDYKSALTIFNKVRET------VREPHVYVNL 804

Query: 676  AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSL 728
             HV+     ++ A++ Y+  L K     D  IL  L RT         + + +    +  
Sbjct: 805  GHVFAELRQYSKAIENYEIALTKDGKANDPVILSCLGRTWLNRGRSERDIDAYGKALECA 864

Query: 729  LRAIHLAPSNYTLRFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSA 786
             +A+ +AP     +F+ A V +Q  +    L + RRTA+++ +  A LE A+     L A
Sbjct: 865  QQALEVAPDQVHYKFNVAFVQIQLVTTIQNLPENRRTAEQLETAAAGLEAAI---ESLDA 921

Query: 787  ASNLHLHGFDEKKINTHVEYCKHLL----------------------DAAKIHREA--AE 822
             + L    + +  I       ++ L                       AAK  REA    
Sbjct: 922  IATLPQTPYPKHDIEQRANMARNTLRKQLERAIAKQKEWEEKNKEKIQAAKEQREAELKR 981

Query: 823  REEQ------QNRQRQE---------AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKR 867
            REEQ      + R+RQE         A R  ALAE+  R  EE++K  LE     +  ++
Sbjct: 982  REEQRQEILEKERERQEKIRKEREAIAIRDRALAEQ--RAEEERQKQELEMTTDAETGEK 1039

Query: 868  LRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYE 927
            ++++ +   R  E     TP  K+  R E+D +   H++KRRR   K   K KS+    +
Sbjct: 1040 VKRKSKAAARTGEGRPKKTPKKKKAARDEDDSEGESHTKKRRRLTKKESSKFKSAEIVVD 1099

Query: 928  TEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDVDDEM 987
            ++    D  D  E  E E          G  +   D ++ + +D  A +G ED D +D  
Sbjct: 1100 SDDEREDDDDALERAEREMERDGTPASDGDDDLAADKMDVDEDDAPARSGAEDED-EDTA 1158

Query: 988  APSITAARRRRALSESDDDE 1007
            A     +RR R + ESD++E
Sbjct: 1159 ARQAKRSRRGRIVEESDEEE 1178


>gi|262302889|gb|ACY44037.1| SH2 domain binding protein [Ammothea hilgendorfi]
          Length = 178

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 113/178 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ F +  Y  +L FYK+AL+ +P CP A+RLG+  C
Sbjct: 1   ADAQFNFVLGQSPNNIPSLLGKACIAFTKKDYRGALTFYKKALRTNPLCPAAVRLGMAHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            +KLG+L KAR AF+RAL+LDP  V ALV LAVM+L       IR G++ + +A+ I   
Sbjct: 61  FHKLGKLEKARLAFERALELDPHCVGALVGLAVMELNLKTPESIRNGVQMLSKAYTIDSS 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L    +  T +   ++ S Y LARS+H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLAHHGIRNTENEAMRAESCYQLARSFHVQSDYDQA 178


>gi|397645623|gb|EJK76918.1| hypothetical protein THAOC_01291 [Thalassiosira oceanica]
          Length = 1342

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 213/907 (23%), Positives = 370/907 (40%), Gaps = 201/907 (22%)

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF-KIVLEADRDNVPA 119
            +EE   +A   + KA  I+   P TW+ KG L LA+ + +QA   F  + +  + + +PA
Sbjct: 219  REELQGIADARFVKADSINQVNPQTWIAKGMLNLAQKKFDQAKFFFDNLTMRQEGEILPA 278

Query: 120  LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRA 178
            L+G A V++    Y  + + Y +A++  P   GA +R+G G+  Y+L ++ +A+ AF+RA
Sbjct: 279  LIGMAAVKYLEKDYKGAQDLYAKAMEKFPVQSGAAVRVGFGVACYRLNEIDRAKAAFRRA 338

Query: 179  LQLDPENVEALVALAVMD--------LQANE-AAGIRKGMEKMQRAFEIYPYCAMALNYL 229
              +DP+NVEAL+ LA+++        L ANE  A     ++ + +A  +    A   N+L
Sbjct: 339  HDMDPDNVEALMGLAILEMASLDSHALDANEYRAKAGSVIQMISQANLVDHTNASVQNHL 398

Query: 230  ANHFFF----------------------------TGQHFLVEQLTETALAVTNHGPTKSH 261
            ANH+F+                             G    + +  ET +AV +       
Sbjct: 399  ANHYFWKWSPVPGMVSVECGSNIVTGSNVASSLEAGDRIRIGKELETLVAVDDEDEMADG 458

Query: 262  SYYNLARSYH---------SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
              + +  ++           K DYE+      A+    N P       Y L +V    G+
Sbjct: 459  ETFKIKDTWKFDSKSNLKIWKKDYERVISLAKAAYSSTNIPGIQAESLYMLARVFHARGE 518

Query: 313  FRSALTNFEKVLEIYPDNCET-----------LKALGHIYVQLGQIEKAQELLRKAAKID 361
               A  +  + +    D  E            L A+G +  + G+   A   LRKA  +D
Sbjct: 519  MTEAHIDLGRQIRRRRDFAEVVIRYLHNRNGRLAAMGLLDAKAGKRADAFTSLRKAIDLD 578

Query: 362  PRDAQAFIDLGELLI----SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
            P +A   + L E L      +D  A+LD ++ A  LL+  G  +  +VL N+GV+  E  
Sbjct: 579  PFNAD--LVLIEALALQQHETDYPASLDRYRNAVRLLEAQGRSISADVLTNMGVLCHETK 636

Query: 418  EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
            ++E A + +  AL D I     +S  K       ++ ++ ++  LF +++  G  V++  
Sbjct: 637  QYEEALEMYTKAL-DAIESENPESVGKPDET-CDSTFVRHEENSLFWKYQEIGIRVKIDD 694

Query: 478  NKVTVLFNLARLLEQIHD---------TVAASVLYRLI-------------------LFK 509
                +L   + L+E+  D         ++   V   +                    L  
Sbjct: 695  KDKKLLIAPSDLVEECADLLIKVGDDISLGEGVFSTVTDVTEGDDEALHIKVKDDVELKS 754

Query: 510  YQDYVDAYLR----------------LAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 553
            +Q YV +  R                LA + +    +  ++EL    LK +  Y N+   
Sbjct: 755  HQTYVVSVKRSNGRIQNPSVVSIAFNLARLHETSGRIVPAVELHKAILKQHPSYVNSYLR 814

Query: 554  LGDLELKNDDWVKAKETFRAASDATDGKDSYAT------LSLGNW----NYFAALRNEKR 603
            L  +           E  + A     G     T      LSL +W      F  L  +K 
Sbjct: 815  LACIARDCGSLKDCSEWLKNAVAVAPGNPEVLTLVGNLHLSLCDWAPAQKVFDQLLQQK- 873

Query: 604  APKLEA---------------------THLEKAKELYTRVIVQHTSNLYAANGAGVVLAE 642
             PK+EA                      HL  A + Y R++ + T+N YAANG G VLAE
Sbjct: 874  VPKVEAYSMLSLGNIYFNNLNTPKKYNKHLHHAADFYRRILQKDTANAYAANGLGTVLAE 933

Query: 643  KGQ-------------FDV----------SKDLFTQVQEAASGSVFVQMPDVWINLAHVY 679
            KG+             F +          +K++F +V+E +  +    + D  +NL H+Y
Sbjct: 934  KGELLKVISTFLLDRSFQLWRPANFLHVKAKEIFNRVREVSGDT----LSDALLNLGHIY 989

Query: 680  FAQGNFALAMKMYQN----CLRKFYYNT-------DAQILLYLARTHYE----------- 717
             AQ     A++MYQN    C R     T       +A++LLY+A  +++           
Sbjct: 990  LAQKKHPEALQMYQNYMGRCRRSGAQTTSKSQEDDEAEVLLYIAFAYFDWARQTELFNNA 1049

Query: 718  -----AEQWQDCKKSLLRAIHLAP-SNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTV 771
                  E+++ C + + +A+  +   N  LR++  ++  + +   L+K  R    +R T 
Sbjct: 1050 KAAPADERYRMCIEYIEKAMEKSKRENVVLRYNWCLSKLQAANCVLRKVDRN---IRRTA 1106

Query: 772  AELENAV 778
            AE+ +A+
Sbjct: 1107 AEVSDAL 1113


>gi|262302893|gb|ACY44039.1| SH2 domain binding protein [Amblyomma sp. 'Amb2']
          Length = 178

 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 112/178 (62%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAEVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            Y+LG+  KAR AF+RAL LDP+ V AL  LAV+ L        R G++ + RA+ + P 
Sbjct: 61  LYRLGKQEKARAAFERALVLDPQCVGALSGLAVLQLNQKGTEATRAGVQMLSRAYAVDPS 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           C + LN LANHFFF   +  V+ L   A   T +   ++ S Y LARS+H + DY++A
Sbjct: 121 CPVVLNQLANHFFFKKDYGKVQHLALHAFHNTENEAMRAESCYQLARSFHVQEDYDQA 178



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 49  TYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS-TWVGKGQLLLAKGEVEQASSAFK 107
           + LGK      +K+    LA  +Y KA R + + P+   +G G  L   G+ E+A +AF+
Sbjct: 18  SLLGKACIAFNKKDYRGALA--FYKKALRTNPNCPAEVRLGMGHCLYRLGKQEKARAAFE 75

Query: 108 IVLEADRDNVPALLGQACVEFN-RGRYSD--SLEFYKRALQVHPSCP 151
             L  D   V AL G A ++ N +G  +    ++   RA  V PSCP
Sbjct: 76  RALVLDPQCVGALSGLAVLQLNQKGTEATRAGVQMLSRAYAVDPSCP 122


>gi|262302923|gb|ACY44054.1| SH2 domain binding protein [Heterometrus spinifer]
          Length = 178

 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 113/178 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPKCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            YK  +  KAR AF+RALQLDP+ V ALV  AV++L       IR G++ + +A+ I P 
Sbjct: 61  FYKSNKQDKARLAFERALQLDPQCVGALVGQAVLELNQKTPESIRNGVQMLSKAYSIDPS 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYDKVQHLALHAFHNTENEAMRAESCYQLARAFHIQEDYDQA 178


>gi|262302919|gb|ACY44052.1| SH2 domain binding protein [Hadrurus arizonensis]
          Length = 178

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 113/178 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPKCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            YK  +  KAR AF+RALQLDP+ V ALV  AV++L       IR G++ + +A+ I P 
Sbjct: 61  FYKSNKQDKARLAFERALQLDPQCVGALVGQAVLELNLKTPDSIRNGVQMLSKAYSIDPS 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYDKVQHLALHAFHNTENEAMRAESCYQLARAFHIQEDYDQA 178


>gi|68471165|ref|XP_720359.1| hypothetical protein CaO19.7067 [Candida albicans SC5314]
 gi|77022482|ref|XP_888685.1| hypothetical protein CaO19_7067 [Candida albicans SC5314]
 gi|46442223|gb|EAL01514.1| hypothetical protein CaO19.7067 [Candida albicans SC5314]
 gi|76573498|dbj|BAE44582.1| hypothetical protein [Candida albicans]
          Length = 1091

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 222/932 (23%), Positives = 394/932 (42%), Gaps = 134/932 (14%)

Query: 92   LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSC 150
            L L + + + A   F  +L  D +N  ALLG+A    N+ + YS +L+ Y++ L ++P  
Sbjct: 155  LYLYESKDDDAIDIFDRILRIDPNNCFALLGKAQSVLNKTKNYSHALKLYQQVLILNPLM 214

Query: 151  PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI----- 205
                RLGIGLC + L     A QA++R+LQLDP NV++ + L +          +     
Sbjct: 215  KPDPRLGIGLCFWFLKDDKMAIQAWERSLQLDPTNVKSRIFLNLAKFHTTFTNSLSDEEF 274

Query: 206  ----RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL-AVTNHGPTKS 260
                +  ++++ +   +          L ++ F  G +  V ++ E  +  +T     K 
Sbjct: 275  LDNYKNCLQELSKLKSLNANDTTVTLALCSYLFSKGDYNTVIKIVEKIVKGITGSDNLKK 334

Query: 261  HSYYN----------------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
             S ++                LAR   ++G++ ++  Y+  ++K +N+ +  I    GLG
Sbjct: 335  FSTFSRITKYESNALSQCATWLARIEFARGNFTQSSKYFQEAIK-LNETN--IVAKLGLG 391

Query: 305  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI- 360
            Q Q   G    A   FE +L       E   +LG +Y +     K   A ++L +  ++ 
Sbjct: 392  QSQYNRGSIEEASLTFESILRSNVKCLEVNYSLGVLYSKQNSRSKKELAIQVLERYIRLS 451

Query: 361  ----------------DPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPI 403
                            +P    A++ L +L     D   AL     A    ++  ++VP+
Sbjct: 452  NNRGLSSNEEEFVLNKEPVALNAYLILSQLYEAKGDMTQALTYLNKAVEARRQVEKDVPL 511

Query: 404  EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
            EV NNIGV  F K  ++SA ++F  ALG       LD +              FK     
Sbjct: 512  EVYNNIGVFQFTKQNYDSALENFTTALGK------LDGR-------------DFKSP--- 549

Query: 464  HRFENDGNH-VELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                 DG+  V+LP + + ++ +NLAR  ++I +   A   Y  +L +   Y  A LR+ 
Sbjct: 550  -----DGDTLVDLPQDLRTSLTYNLART-KEISNQKDALETYEQLLTECPHYFSAKLRIL 603

Query: 522  -------AIAK--ARNNLQLSIELVNEALKVNGKYPNALSMLGD-LELKND-DWVKAKET 570
                    I K   R+ ++  ++L    L+V   Y   +   G  L + +D D    K+T
Sbjct: 604  FLNCITEGITKEEIRDEIESLLDLNASDLEVRSFYGWFIKNFGKKLHMPSDADTKLQKDT 663

Query: 571  FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNL 630
                    D  D YA +SL N  Y    R+ K A + +  +  +A EL+T+V+   + N+
Sbjct: 664  LVEF----DSHDCYALISLANI-YCIMARDTKGADEKKKKYYLRAIELFTKVLSLDSKNV 718

Query: 631  YAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 690
            YAA G  +   E  Q +   D+  +++++ +         V++NL HV      F  A++
Sbjct: 719  YAAQGLAITYIENKQLNKGLDILRKIRDSLND------ISVYLNLGHVLCDLKQFGKAIE 772

Query: 691  MYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 750
             Y+  L ++    DA+IL +L R  Y     +     L +A+  A +          A  
Sbjct: 773  NYELALTRYTDGKDAKILSFLGRVWYLRGNAESSLPYLKKALGYAQAALDAARSTSTAAL 832

Query: 751  KFSASTLQ-----------KTRRTADEVRSTVAELENAVRVFSHLSAASNLH-------L 792
             F+ S +Q              R  +++ S +  L  A+ + + L++    H       L
Sbjct: 833  AFNISFVQFQIADFITKQPVNERNIEDIESAIEGLNKAIDILTQLASDEEKHPPYPREEL 892

Query: 793  HGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE-ARRKAEEQ 851
             G      +T +    + L+  K     AE EE     + + A+Q  L EE AR K EE+
Sbjct: 893  RGRANLGTSTLLSRLANALEETK--ENNAEIEE-----KIQKAKQIRLDEEQARLKEEEE 945

Query: 852  KKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRK 911
            +   L++++LE  ++R+  QE+      ++W     AS     +E DDD++   E  +++
Sbjct: 946  RLNKLKEKELEMSKQRMLLQEQA-----QKWAEENSASVGVSDNEEDDDKLFDEESAQKE 1000

Query: 912  GGKRRKKDKSSRSHYETEYAEADMMDYREEPE 943
              +++      +     +     + D  EEPE
Sbjct: 1001 NKRKKGGSSKGKKGKGRKKKGNIIDDSEEEPE 1032


>gi|262302943|gb|ACY44064.1| SH2 domain binding protein [Lynceus sp. 'Lyn']
          Length = 178

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 117/178 (65%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  V     +N+PALLG+AC+ FN+  +  +L +YK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVFNQSPNNIPALLGKACISFNKKDFRGALAYYKKALRTNPNCPAGVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG + KA+ AF+RAL+LDP+ V ALV LAV++L   ++  IR G++ + +A+ +   
Sbjct: 61  FLKLGSVDKAKLAFERALELDPKCVGALVGLAVLELNQQDSDSIRTGVQLLSKAYAVDAT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF  ++  V +L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 IPMVLNHLANHFFFKKEYPKVMKLAMHAFQNTENEAMRAESCYQLARAFHVQGDYDQA 178



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 312 DFRSALTNFEKVLEIYPDNCE--TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           DFR AL  ++K L   P NC       +GH +++LG ++KA+    +A ++DP+   A +
Sbjct: 31  DFRGALAYYKKALRTNP-NCPAGVRLGMGHCFLKLGSVDKAKLAFERALELDPKCVGALV 89

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNNIGVIHFEKGEF 419
            L  L ++       D+ +T   LL KA      +P+ VLN++    F K E+
Sbjct: 90  GLAVLELNQQDS---DSIRTGVQLLSKAYAVDATIPM-VLNHLANHFFFKKEY 138



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPS-TWVGKGQLLLAKGEVEQASSAFKIV 109
           LGK      +K+  F  A  YY KA R + + P+   +G G   L  G V++A  AF+  
Sbjct: 20  LGKACISFNKKD--FRGALAYYKKALRTNPNCPAGVRLGMGHCFLKLGSVDKAKLAFERA 77

Query: 110 LEADRDNVPALLGQACVEFNRGRYSDSL 137
           LE D   V AL+G A +E N+ + SDS+
Sbjct: 78  LELDPKCVGALVGLAVLELNQ-QDSDSI 104


>gi|451999407|gb|EMD91869.1| hypothetical protein COCHEDRAFT_1193487 [Cochliobolus heterostrophus
            C5]
          Length = 1168

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 236/994 (23%), Positives = 403/994 (40%), Gaps = 185/994 (18%)

Query: 36   ERIAILNALGVYYTYLGKIETKQREKEEHFIL-----------ATQYYNKASRIDMHEPS 84
            +R++ILN  G+ + YL K     R + ++ +            AT   N ASRI    P 
Sbjct: 91   DRLSILN--GLCWLYLLKCREAPRVRPQNAVPDTKLKEFWIQSATGVLNDASRISPSHPP 148

Query: 85   TWVGKGQLLLAKGEVE-------------------QASSAFKIVLEADRD-NVPALLGQA 124
             ++ +G L L K  ++                   QA+  F+  L A    N+ A +G+A
Sbjct: 149  LFLARGVLYLLKASLQGPATAAGSTVSPERMETLKQAAKCFEDALRASGGRNLMAKMGKA 208

Query: 125  CVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
             V ++ G+++D+L+ Y+  L+  P    P   R+GIG C ++LG   +A  A+QR+L+L+
Sbjct: 209  RVNYSMGKWADALKAYQNILETSPDLIDPDP-RIGIGCCFWQLGYKDEAANAWQRSLELN 267

Query: 183  PENVEALVALAVMDLQ--ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            P +  AL+ L + + Q  AN +    K  E +++A   +   A+ L+        T   +
Sbjct: 268  PRSKVALILLGIYNFQQTANLSTSDPKFAELIKKATGEFIQPALKLDNQYPLSCATVGSY 327

Query: 241  LV--------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EIN 291
            L+        E +   A+ +T+     S  +Y  A+  H + +   A  YY  S +    
Sbjct: 328  LILRRDVNKTEDVARRAIELTDTNAIASDGWYLRAKVAHQQDNIALAAEYYSKSDQARGG 387

Query: 292  KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ-------- 343
            +   FI   +GL Q+ + + ++  A    EK+L+  P N E    LG +Y +        
Sbjct: 388  EERGFIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-NVEAQTLLGTLYAEDVFNAQNS 446

Query: 344  ------LGQIEKAQELLR--KAAKIDPR-----DAQAFIDLGELLISSDTGAAL------ 384
                    +++KA + L   ++A  DP+     D    ++L  L  +     +L      
Sbjct: 447  KSTEDKSAELKKALKYLESVQSAWKDPKRKVVPDQSVLLNLARLYETEHPERSLKCLEEV 506

Query: 385  --------------DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                          +  +    L     E +P ++LNN+G  HF+   +  A + F+ AL
Sbjct: 507  EQMEIEAIPQEDYPEGIEEGPELTTALREMLPPQLLNNMGCFHFQAERYVRAQELFQVAL 566

Query: 431  GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
                    ++++ +   ID  A +                          ++ FNLAR  
Sbjct: 567  -----TACVNAENRDDTIDTDALV-------------------------TSISFNLARTY 596

Query: 491  EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
            E    T  A  +Y  +L ++ DYVDA +RL  +A   N        V +  K N      
Sbjct: 597  EAEGQTDEAKKVYNSLLQRHPDYVDARIRLTYMALKENPQDEGPRAVKDLFKQNEDNVEV 656

Query: 551  LSMLGDLELKNDDWVKAKETFR----AASD----------ATDGKDSYATLSLGNWNYFA 596
             ++ G        W   K   R    AA D           +D  D Y+ + +GN  + A
Sbjct: 657  RALYG--------WYVNKSKKRTQNFAADDEQRLYKHTLQKSDKHDRYSLMGMGNI-HLA 707

Query: 597  ALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKD 651
              R   R  + +        E+A E + +V+     N YAA G  + L E K  +  +  
Sbjct: 708  IAREMPRTSEQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIALVEDKKDYSTALQ 767

Query: 652  LFTQVQEAASG-SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 710
            +FT+V+E     SVFV       NL H Y     +A A++ Y+  L K  +N D +IL  
Sbjct: 768  IFTKVKETLKDHSVFV-------NLGHTYCEIRQYARAIENYEAALSKNRHN-DPKILAC 819

Query: 711  LARTHYEAEQWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST---- 756
            L R  Y   + +          D  K  L+A   AP++   +F+  VA  +F  +T    
Sbjct: 820  LGRAWYLRAKHERSIAGFRTALDYSKQALKA---APADLNSQFN--VAFVQFQIATMIYS 874

Query: 757  LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAK 815
            L + +RT +EV      L  A+     L+          D   + N         L+ A+
Sbjct: 875  LPEHQRTLEEVDDAATGLTEAIEALEKLAKEETPPFPRADITSRANMGRNTMIKQLERAR 934

Query: 816  IHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHF 875
              + A E E      +    R+A        K   +++ L +KRK  +EQ+RL Q++   
Sbjct: 935  EKQAAYEGENATKLDQARRLREAEKLRREEEKKRLEEEALEKKRKYAEEQERLIQRDREL 994

Query: 876  QRVKEQWRSSTPASKRRERSENDDD-EVGHSEKR 908
               + +        + R+R E+D+D E+  +E+R
Sbjct: 995  MEKRNE--------EERKRMEDDEDKEIRKAERR 1020


>gi|262302909|gb|ACY44047.1| SH2 domain binding protein [Daphnia magna]
          Length = 178

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 114/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    DN+P+LLG+AC+ FN+  Y  +L +YK+AL+ + +CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPDNIPSLLGKACISFNKKDYKAALAYYKKALRTNATCPAGVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL LDP+ V ALV +A+++L   E+  IR G++ + RA+ +   
Sbjct: 61  FLKLGNAEKARLAFERALDLDPKCVGALVGMAILELNLQESDSIRNGVQLLSRAYAVDSS 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y +AR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQMARAFHVQGDYDQA 178


>gi|212536086|ref|XP_002148199.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Talaromyces marneffei ATCC 18224]
 gi|210070598|gb|EEA24688.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Talaromyces marneffei ATCC 18224]
          Length = 1190

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 247/1043 (23%), Positives = 425/1043 (40%), Gaps = 200/1043 (19%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ------ 58
            Y KQ +++   +IL++G    +         E++ +LN    +  +L  I+++Q      
Sbjct: 81   YAKQNQLDHAIEILQKG----LASVAHGATKEKLGLLN----WLCWLLMIKSRQAPRVAP 132

Query: 59   -------REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
                   + K+ +   AT   N+ASR++      ++ +G L L +               
Sbjct: 133  DGDNSDVKTKDFYLQQATSTLNEASRLNPAYTPLFLARGVLSLLRASLYPPRPVRTGIPD 192

Query: 99   ----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   EA +     NV A LG A  +++ G Y+++L  Y+  L      
Sbjct: 193  TSERVESLRQALKCFEEASKASGGRNVMAHLGLARAQYSLGNYAEALLVYQTVLT---RM 249

Query: 151  PGAI----RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI- 205
            PG I    R+GIG C ++LG   +A+ A++RAL L+P++  A + +    L ++      
Sbjct: 250  PGLIDPDPRIGIGCCLWQLGFKERAKDAWERALFLNPKSKVASILVGTYYLYSSSQYPTS 309

Query: 206  --------RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
                    R  M   Q + ++     MA    A +      +  VE L   A+  T+   
Sbjct: 310  DPRFGELYRTSMTHTQGSLKLDKDYPMACARFAGYKLIRKDYKAVEVLARKAIEQTDVVS 369

Query: 258  TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSA 316
              S  +Y L R  H +GD  KA  Y+  S +          P  +G+ Q+Q+K  D   A
Sbjct: 370  IASEGWYLLGRKAHYEGDTAKASEYFNRSDQARGGGESGFLPAKFGVVQMQVKSKDLDGA 429

Query: 317  LTNFEKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLR 355
                E +++    N E++  LG +  +                     +  +E  + L +
Sbjct: 430  KFRLENIIQ-QTKNPESMALLGALLAEDVFAAQASGSKDDKTADATRAISLLESVRSLWK 488

Query: 356  KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKK 396
              AK  P D    I L  L  S+    ++        +                   LK 
Sbjct: 489  DPAKNIPPDESVLIYLSRLYESTSPDKSMQCLTQLEEIQMDQISDQDRPDATLQNGELKA 548

Query: 397  AGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 455
            A  E +P ++LNNIG   ++ G+   A + F+ AL      T  D   +     A+ ++L
Sbjct: 549  ALREYLPPQLLNNIGCFLYQSGKVAQARELFQAAL------TACDKSEELEGEKATDALL 602

Query: 456  QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD 515
                                     TV +N  R LE +     A  +Y  +L ++ DY +
Sbjct: 603  ------------------------TTVRYNFGRSLEALDLPDEAKKVYESLLERHSDYTE 638

Query: 516  AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAA 574
            A  R+  IA       L     +E  K  GK   + S   +LE++    W  +K   RAA
Sbjct: 639  ASARMTYIA-------LRQSPTDEGPKKMGKLYESDST--NLEVRALFGWYLSKSKKRAA 689

Query: 575  SDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKE 617
            + A D +              D YA   +GN +   A  +R E  A K +   + E+A E
Sbjct: 690  NLAEDPEQRHYKHTLQHFDKHDRYALTGMGNVHLLTARDMRRETDADKEKRRKMYERAVE 749

Query: 618  LYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 676
             + + +     N YAA G  + L + +  F  +  +F+++++    S       V++NL 
Sbjct: 750  FFDKALQLDPKNAYAAQGIAIALVDDRKDFTGAVQIFSKIRDTIKDS------SVYLNLG 803

Query: 677  HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL---- 729
            H Y     F+ +++ Y+  L K     DAQIL  L R  +   + E+     K+ L    
Sbjct: 804  HAYAELKQFSRSIECYEMALSKDRAR-DAQILACLGRVWWLRGKHEKNLTAMKTALDYAS 862

Query: 730  RAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAA 787
            RA+ +AP    L F+      + +   ++L +T+RT  +++     LE A+  F+ ++ A
Sbjct: 863  RALAVAPEQAHLEFNVAFVQNQIALLVNSLPETQRTLQDLQEAAEGLEKAIETFTRIAQA 922

Query: 788  SNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE--QQNRQRQEAARQAALAEEAR 845
                   +  + +       ++ + + ++ R    ++E  ++N  + + AR A  AE  R
Sbjct: 923  KT---PPYPRESLEQRANMGRNTI-SKQLERSIQNQKEYEEKNALKLQQARAAREAELKR 978

Query: 846  RKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKR------RERSE-ND 898
            R+ E QK   L       EQ+R RQ  E  QR+ E+  +   A+KR      RE +E   
Sbjct: 979  REEEVQKAQEL-------EQERKRQVAEQRQRIIEE--TQRLAAKRAEEQRAREAAELTT 1029

Query: 899  DDEVGHSEKRRRK---GGKRRKK 918
            D E G  +KR++K   GG+RRK+
Sbjct: 1030 DTETGERQKRKKKAPSGGRRRKR 1052


>gi|157939611|gb|ABW05530.1| SH2 domain binding protein [Triops longicaudatus]
          Length = 177

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 114/177 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ + +CP  +RLG+G C
Sbjct: 1   ADAQFTFVLNQSPNNIPSLLGKACISFNKKDYRGALAFYKKALRTNANCPAGVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL+LDP+ V ALV LA+++L   E   IRKG++++ +A+ I   
Sbjct: 61  FIKLGNQEKARLAFERALELDPQCVGALVGLAILELNMQEGEAIRKGVQRLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++
Sbjct: 121 NPMVLNHLANHFFFKKDYAKVQHLALHAFHNTENEAMRAESCYQLARAFHVQHDYDQ 177


>gi|448537710|ref|XP_003871389.1| Ctr9 protein [Candida orthopsilosis Co 90-125]
 gi|380355746|emb|CCG25264.1| Ctr9 protein [Candida orthopsilosis]
          Length = 1129

 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 179/714 (25%), Positives = 314/714 (43%), Gaps = 111/714 (15%)

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           L+++ ++ A    ++  S ++ +  L L +G  ++AS  F+ +L+ D+ N  ALLG+A  
Sbjct: 130 LSSRIHDDAQSSPVNNTSNFLSQAVLALYQGHDDEASQIFERILKIDQQNTFALLGKAQA 189

Query: 127 EFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
             N+ + Y+++L+ Y++ L ++P+     RLGIGLC + L     A QA++RAL+LDP+N
Sbjct: 190 LLNKSKNYANALKLYQQVLVLNPATKPDPRLGIGLCCWFLNDEKMAIQAWERALELDPKN 249

Query: 186 VEALVAL-------AVMDLQANE--AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 236
           ++A + L       A  +  ++E      +  + ++ +  +     A  L  LA++++  
Sbjct: 250 LKARIFLNLAHFHEAFNNSWSDEEFITNYKACLNELAKIHKSNVNDATVLLVLASYYYSK 309

Query: 237 GQHFLVEQLTETALA----------VTNHGPTKSHSYYN---------LARSYHSKGDYE 277
                VE+L +  +           +T H  +K+  Y +         L R   S+GD+ 
Sbjct: 310 NDFETVERLLKKVVKDITGDSSLTKLTTH--SKASKYESNVLSECGTWLGRVKFSEGDFI 367

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A  Y+  ++K +N  +  I    GLGQ Q   G    A   FE +L    +  E   +L
Sbjct: 368 QASRYFQEAIK-LNDLN--IVAKLGLGQSQYNRGSVDEATLTFESILRSNANCLEANYSL 424

Query: 338 GHIYVQLGQIEK---AQELLRKAAKI-------------------DPRDAQAFIDLGELL 375
           G IY +    +K   A ++L +  ++                   +P    A++ L  L 
Sbjct: 425 GVIYAKQSSRKKKELAIQVLERYIRLSNNRGLSSSKNDADFLLNKEPVALNAYLTLSSLY 484

Query: 376 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 435
            S+D   AL     A     + G++VP+E+ NNIGV  F K  F+ A ++F+ A+     
Sbjct: 485 ESTDLSQALSYLNKAVEARNQVGKDVPLEIYNNIGVFQFTKQNFKGALENFQVAI----- 539

Query: 436 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN-KVTVLFNLARLLEQIH 494
               D       +     +L                 ++LP + +V++ FN AR  E  +
Sbjct: 540 ----DKLDGAEFLSPDGDVL-----------------IDLPSDLRVSLTFNSARTKELSN 578

Query: 495 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL---VNEALKVNGKYPNAL 551
           +  A    Y  +L +   Y  A LR+  ++          E+   ++E LK+N       
Sbjct: 579 EKEALET-YESLLSECPHYFSAKLRILFLSCISETGLTPKEIQSEIDELLKLNASDLEIR 637

Query: 552 SMLG--------DLELKND-DWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 602
           S  G         L +K D D    KET        D  D YA LSL N   +  L  + 
Sbjct: 638 SFYGWFAKNFGKKLGMKPDADTAFQKETLVE----YDKHDCYALLSLAN--IYCVLARDL 691

Query: 603 RAPKLEA---THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA 659
           +   +E    T+  +A ELYT+V+     N+YAA G  +V  E  +     D+  +++++
Sbjct: 692 KGSSVEEKKRTYYVRATELYTKVLTVDRKNVYAAQGLAIVYIENKESTKGLDILRKIRDS 751

Query: 660 ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
            +         V++NL HV      +  A++ Y+  L +F    D QIL +L R
Sbjct: 752 LND------ISVYLNLGHVLCDVKQYGKAIENYELALTRFTDGKDVQILTFLGR 799


>gi|238883226|gb|EEQ46864.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 1091

 Score =  159 bits (402), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 222/932 (23%), Positives = 393/932 (42%), Gaps = 134/932 (14%)

Query: 92   LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSC 150
            L L + + + A   F  +L  D +N  ALLG+A    N+ + YS +L+ Y++ L ++P  
Sbjct: 155  LYLYESKDDDAIDIFDRILRIDPNNCFALLGKAQSVLNKTKNYSHALKLYQQVLILNPLM 214

Query: 151  PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI----- 205
                RLGIGLC + L     A QA++R+LQLDP NV++ + L +          +     
Sbjct: 215  KPDPRLGIGLCFWFLKDDKMAIQAWERSLQLDPTNVKSRIFLNLAKFHTTFTNSLSDEEF 274

Query: 206  ----RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL-AVTNHGPTKS 260
                +  ++++ +   +          L ++ F  G +  V ++ E  +  +T     K 
Sbjct: 275  LDNYKNCLQELSKLKSLNANDTTVTLALCSYLFSKGDYDTVIKIVEKIVKGITGSDNLKK 334

Query: 261  HSYYN----------------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
             S ++                LAR   ++G++ ++  Y+  ++K +N+ +  I    GLG
Sbjct: 335  FSTFSRITKYESNALSQCATWLARIEFARGNFTQSSKYFQEAIK-LNETN--IVAKLGLG 391

Query: 305  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI- 360
            Q Q   G    A   FE +L       E   +LG +Y +     K   A ++L +  ++ 
Sbjct: 392  QSQYNRGSIEEASLTFESILRSNVKCLEVNYSLGVLYSKQNSRSKKELAIQVLERYIRLS 451

Query: 361  ----------------DPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPI 403
                            +P    A++ L +L     D   AL     A    ++  ++VP+
Sbjct: 452  NNRGLSSNEEEFVLNKEPVALNAYLILSQLYEAKGDMTQALTYLNKAVEARRQVEKDVPL 511

Query: 404  EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
            EV NNIGV  F K  ++SA ++F  ALG       LD +              FK     
Sbjct: 512  EVYNNIGVFQFTKQNYDSALENFTTALGK------LDGR-------------DFKSP--- 549

Query: 464  HRFENDGNH-VELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                 DG+  V+LP + + ++ +NLAR  ++I +   A   Y  +L +   Y  A LR+ 
Sbjct: 550  -----DGDTLVDLPQDLRTSLTYNLART-KEISNQKDALETYEQLLTECPHYFSAKLRIL 603

Query: 522  -------AIAK--ARNNLQLSIELVNEALKVNGKYPNALSMLGD-LELKND-DWVKAKET 570
                    I K   R+ ++  ++L    L+V   Y   +   G  L + +D D    K+T
Sbjct: 604  FLNCITEGITKEEIRDEIESLLDLNASDLEVRSFYGWFIKNFGKKLHMPSDADTKLQKDT 663

Query: 571  FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNL 630
                    D  D YA +SL N  Y    R+ K A + +  +  +A EL+T+V+   + N+
Sbjct: 664  LVEF----DSHDCYALISLANI-YCIMARDAKGADEKKKKYYLRAIELFTKVLSLDSKNV 718

Query: 631  YAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 690
            YAA G  +   E  Q +   D+  +++++ +         V++NL HV      F  A++
Sbjct: 719  YAAQGLAITYIENKQLNKGLDILRKIRDSLND------ISVYLNLGHVLCDLKQFGKAIE 772

Query: 691  MYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 750
             Y+  L ++    DA+IL +L R  Y     +     L +A+    +          A  
Sbjct: 773  NYELALTRYTDGKDAKILSFLGRVWYLRGNAESSLPYLKKALGYTQAALDAARSTSTAAL 832

Query: 751  KFSASTLQ-----------KTRRTADEVRSTVAELENAVRVFSHLSAASNLH-------L 792
             F+ S +Q              R  +++ S +  L  A+ + + L++    H       L
Sbjct: 833  AFNISFVQFQIADFITKQPVNERNVEDIESAIEGLNKAIDILTQLASDEEKHPPYPREEL 892

Query: 793  HGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE-ARRKAEEQ 851
             G      +T +    + L+  K     AE EE     + + A+Q  L EE AR K EE+
Sbjct: 893  RGRANLGTSTLLSRLANALEETK--ENNAEIEE-----KIQKAKQIRLEEEQARLKEEEE 945

Query: 852  KKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRK 911
            +   L++++LE  ++R+  QE+      ++W     AS     +E DDD++   E  +++
Sbjct: 946  RLNKLKEKELEMSKQRMLLQEQA-----QKWAEENSASVGVSDNEEDDDKLFDEESAQKE 1000

Query: 912  GGKRRKKDKSSRSHYETEYAEADMMDYREEPE 943
              K++      +     +     + D  EEPE
Sbjct: 1001 NKKKKGGSSKGKKGKGRKKKGNIIDDSEEEPE 1032


>gi|367049860|ref|XP_003655309.1| hypothetical protein THITE_2118878 [Thielavia terrestris NRRL 8126]
 gi|347002573|gb|AEO68973.1| hypothetical protein THITE_2118878 [Thielavia terrestris NRRL 8126]
          Length = 1281

 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 215/905 (23%), Positives = 366/905 (40%), Gaps = 179/905 (19%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ KV+   ++L  G+    +   A+ R E+++I+  L   Y +           G +
Sbjct: 79  YAKQNKVDFAIEMLTRGA----NVLQANQR-EKLSIITCLCWLYLWKSREAPRVAPEGSL 133

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL----------AKGEV----- 99
            ++ + KE +  LATQ  N ASRI+   P  ++ +G L+L          A G V     
Sbjct: 134 ASEAKTKEYYLQLATQSLNDASRINPAFPPLFLARGVLILLRASLQPPSKAPGAVDSHKA 193

Query: 100 EQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
           EQ  +A K   EA R     N+ A++G+A V  + GRY ++L  Y+  L   P       
Sbjct: 194 EQLRNALKSFEEAIRVSQGRNMLAVMGKARVLSSLGRYPEALAAYQDVLAKMPDMVDPDP 253

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
           R+GIG C ++LG    A+ A++R L+++PE+  A + L +  L A+              
Sbjct: 254 RIGIGCCFWQLGFKDDAKAAWERCLEINPESKYANILLGLYYLDASGHVPTHSPEFIRLY 313

Query: 206 RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +K M E  Q++F++     +     A +F    Q   VE L   A+  T+     S  +Y
Sbjct: 314 KKAMTEYTQKSFKLDKNLPLTCATFAGYFLSRKQFPNVEALAHKAIQNTDVNAIASDGWY 373

Query: 265 NLARSYHSKGDYEKAGLYYM-ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            LAR  H  G+ E+A  YY  A          F+   +G+ Q+ +   D   A    EK+
Sbjct: 374 LLARKEHYDGNLERASDYYRRADDARGGTERGFLPAKFGMAQLSVLKNDLGEAKLRLEKM 433

Query: 324 LEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDP 362
           ++    N E +  LG +Y +                     +G +E A+   +   K   
Sbjct: 434 IQ-QSKNYEAMVLLGTLYAEEVFANQSAAVKEDKSAEAKKAIGLLEGARSAWKDPKKNLA 492

Query: 363 RDAQAFIDLGELLISSDTGAALDAFK-----------------------TARTLLKKAGE 399
            D    ++L  L        AL   +                         R  ++K   
Sbjct: 493 PDTAVLLNLARLYEQDSPDKALQCLQQVEQLEIEQIPQSEYPADREDEAATRAAIRKL-- 550

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 459
            +P ++LNNIG  + + G+ + A + F+ AL     ++  +S+     +D  A +     
Sbjct: 551 -LPPQLLNNIGCFYSQDGKHQLATEFFQAALDSCARISQTESE-----LDTDALL----- 599

Query: 460 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
                                T+ FNL R  E   +   A   Y  +L ++ DY DA  R
Sbjct: 600 --------------------TTISFNLGRSYESEGEVDKAVETYERLLSRHSDYTDARTR 639

Query: 520 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETF 571
           LA I   RN               N + P+ ++ L      DLE++    W   K     
Sbjct: 640 LAYINLRRNP--------------NKEGPDGVAKLYQENSADLEVRALYGWFLGKVNSKK 685

Query: 572 RAASDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEK 614
           R A+ A D +              D YA + +GN +  +A  +R E    K + +    +
Sbjct: 686 RPANLAEDPEQRHYKHTLQNYDKHDRYALVGMGNLHLMSAREMRRETEQDKQKRSAAYNR 745

Query: 615 AKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
           A E + + +     N YAA G  + L E K  +  +  +F +V+E       +Q   V++
Sbjct: 746 AVEFFDKALQLDPKNAYAAQGIAIALVEDKKDYKSALQIFLKVRET------IQDAHVYV 799

Query: 674 NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL- 729
           N+ H+Y   G F  A++ Y+  L K     D  IL  L RT       E+  D  K  L 
Sbjct: 800 NMGHIYAELGQFTKAIESYEIALSKEGKANDPGILSCLGRTWLNKGRTERNLDAYKMALE 859

Query: 730 ---RAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHL 784
              +A+ +AP    L+F+      + + +  +++ + RT+ ++      LE+A++    +
Sbjct: 860 YAKKALSVAPEQLHLKFNVAFVQIQLALTLHSMRDSERTSFQLEEAAEGLESAIKALDEI 919

Query: 785 SAASN 789
           +A+ +
Sbjct: 920 AASPS 924


>gi|2896142|gb|AAC03120.1| Tpr1 [Schizosaccharomyces pombe]
          Length = 1039

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 205/856 (23%), Positives = 365/856 (42%), Gaps = 123/856 (14%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           K  +E A+  F  VL+    N+   LG+A + + +G Y  +   Y+RAL  +P      R
Sbjct: 154 KESLENAARCFDFVLQKSGGNILGFLGKARILYAKGNYRSAFRLYQRALVSNPQFKPDPR 213

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPEN--VEALVALAVMDL---QANEAAGIR---K 207
           +GIGLC + L     A  A+ R  QLDP+N  V+  + L   DL     N  + ++   K
Sbjct: 214 IGIGLCFWNLDMKTDALSAWTRVQQLDPKNTVVDTYIGLYYYDLAFQNVNNDSFVQNYGK 273

Query: 208 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
            ++ +QRAF+      +A + L  + +    +    +L E  +  +      +  YY + 
Sbjct: 274 ALQHIQRAFKTRNNDPVASSILERYVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMG 333

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
           R+YH  G+ EKA   Y  + K  +  H  +    G+GQ+Q+   D  SA   FE++ E  
Sbjct: 334 RAYHQMGNNEKAMASYQKA-KAADDRH--LLSSVGIGQIQILQNDLTSAKLTFERIAEQN 390

Query: 328 PDNCETLKALGHIYVQLGQ--IEKAQELLRKAAKID-----PR--DAQAFIDLGELLISS 378
               E L  LG ++    +  + KA+ LL +A  +      PR  D+  +I    L    
Sbjct: 391 QSCFEALVVLGCLHASDSKPDLTKARMLLDRAFNLVGSSKLPRVVDSDLYITQARLWEKE 450

Query: 379 DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 438
           DT  +L     A   L+ A   V  E+LNNI V+ +  G    AH       G+ I    
Sbjct: 451 DTKKSLGFLTRALDFLESAHMSVGPELLNNIAVLQYHLGLIPEAH-------GNII---- 499

Query: 439 LDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA 498
              K K+ + DA+  +    D                        +NLAR  E++ +T  
Sbjct: 500 ---KAKSVLPDANPELSLLLD------------------------YNLARCEEELGNTSV 532

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE 558
           AS  Y  IL K+  ++DA +R   +  +  N + + + +   +  + +     + LG   
Sbjct: 533 ASEAYVSILEKHPSFIDARIRKCLLQLSNPN-EETFKEIRHIMNADSQNLEVRAFLG--- 588

Query: 559 LKNDDWVKAKETFRAASDATD----------GKDSYATLSLGNWNYFAA----LRNEKRA 604
                W  +K+  R   D               D Y+ + LGN     A    + N++  
Sbjct: 589 -----WYLSKQKRRPVEDPEVRHCSQTLRHWHDDIYSLVQLGNAYMRQAREFRVHNDREK 643

Query: 605 PKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSV 664
            K +  ++ KA + Y + I     N +AA G  ++LA+  QF  +  + ++V+EA   + 
Sbjct: 644 LKRQKLYI-KAIQSYDQAIKFDPKNAHAAQGIAIILAQNRQFSKALLILSKVREAIKDAT 702

Query: 665 FVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE---AEQW 721
            +      IN+ +       F+ A+++++        +    +L  L R   +     + 
Sbjct: 703 TL------INIGNCLAELKQFSRAIEVFETVYSSTGESDTYGVLSCLGRVWLQRGRESKN 756

Query: 722 QDCKKSLLRAIHLA----PSNYTLRFDAGVAMQKFSASTLQKTR----RTADEVRSTVAE 773
            D  K  +R   LA    P N +L F+  VA  +F    L + +    RT +++   + +
Sbjct: 757 VDYLKESVRYATLALEKNPENPSLLFN--VAFVQFQLCELIRQKPENSRTVEDLNFAMQQ 814

Query: 774 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDA-AKIHREAAEREEQQNRQRQ 832
           L+ ++  F+ L +                H  Y    ++  AK+ +   +R+ ++  Q Q
Sbjct: 815 LDASIETFTKLVSVE--------------HPPYSPTSIEQRAKMAKNTTKRQLERAIQAQ 860

Query: 833 EAARQ--AALAEEAR--RKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKE---QWRSS 885
               +  AA  E+AR  R+ E+ ++   E+  L+++Q+R RQ +E  Q+++E   +WR S
Sbjct: 861 IEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQERERQLQEERQKMQEEVLEWRKS 920

Query: 886 TPASKRRERSENDDDE 901
              +   + S +DD+E
Sbjct: 921 QQKASEDDMSLSDDEE 936


>gi|336264871|ref|XP_003347211.1| hypothetical protein SMAC_08103 [Sordaria macrospora k-hell]
 gi|380087904|emb|CCC13982.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1280

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 257/1062 (24%), Positives = 445/1062 (41%), Gaps = 216/1062 (20%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
            Y KQ K++   ++L +G+    +   A+   E+++I+ AL   Y +           G +
Sbjct: 88   YAKQKKIDFAIEMLIKGA----NAMQANNPREKLSIVTALCWMYLWKSREAPRVAPEGAL 143

Query: 55   ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS----------- 103
             ++ + KE +  LATQ  N+ASRI+   P  ++ +G L L +  ++  S           
Sbjct: 144  VSEAKTKEYYLQLATQSLNEASRINPAFPPLFLARGVLQLLRASLQPPSKAPGAVDPEKT 203

Query: 104  ----SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
                +A K   +A R    +N+ A++G+A   F+  RY+D+L  Y+ AL   P       
Sbjct: 204  ETLRAALKSFDDALRVSSGENMLAVIGKARALFSLSRYADALAAYQDALARAPDLVDPDP 263

Query: 155  RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
            R+GIG C ++LG    AR A++RAL+++ E+    + L +  L A+    I         
Sbjct: 264  RIGIGCCFWQLGYKDDARIAWERALEINAESKVGNILLGLYYLDASGHVPINSPEFIRLY 323

Query: 206  RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
            +K M E  Q+++++     +     A++F    Q   VE L   A+  T+     S  +Y
Sbjct: 324  KKAMTEYTQKSYKLDKDLPLTCATFASYFLSRKQFDHVEALAHKAIQFTDVNAIASDGWY 383

Query: 265  NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKV 323
             LAR  H   + E+A  YY  +            P  +G  Q+ +   D   A    EK+
Sbjct: 384  LLARKEHYANNLERAADYYRRADDARGGTERGYLPAKFGAAQLSVIKNDLGEAKLRLEKM 443

Query: 324  LEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR---- 363
            ++    N E +  LG++Y +                + +KA  LL   ++A  DP+    
Sbjct: 444  IQ-QAKNYEAMILLGNLYAEEVFANQYAPVKEDKSAEAKKAIGLLESVRSAWKDPKKSLA 502

Query: 364  -DAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKAGEE-VP 402
             DA   ++L  L  + +   AL   +    L                   +K A    +P
Sbjct: 503  PDAAVLLNLARLYETENPDKALQCLQQVEQLELDQVPHSERPDEVEGEAAIKAALRRFLP 562

Query: 403  IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
             ++LNNIG  ++++ + E A + F+ AL   I +   +  T T   DA  +         
Sbjct: 563  PQLLNNIGCFYYQEEKHELASELFEAALSSCIRIGEKNDDTDT---DALVT--------- 610

Query: 463  FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                              T+ FNL R  E    +  A  +Y  +L ++ DYVDA  RLA 
Sbjct: 611  ------------------TISFNLGRSYEARGMSDKAVEVYEGLLKRHDDYVDARTRLAY 652

Query: 523  IAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAKETFRA--- 573
            I K RNN                + P+A++ L      DLE++    W   K + R    
Sbjct: 653  I-KLRNN------------PGTKEGPDAVAKLYQENSSDLEVRALYGWFLGKLSSRKRPS 699

Query: 574  --ASDAT-----------DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKE 617
              A D             D  D YA + +GN +  +A  +R E  A + + +    +A E
Sbjct: 700  NIAEDPEQRHYKHTLQNYDKHDRYALVGMGNLHLISAREMRRETEADRQKRSAAYSRAVE 759

Query: 618  LYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 676
             + + +     N YAA G  + L E K  +  +  +F +V+E       ++   V++NL 
Sbjct: 760  FFDKALQLDPKNAYAAQGIAIALVEDKKDYKGALQIFIKVRET------IKDVHVFVNLG 813

Query: 677  HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL---- 729
            H+Y     F  A++ Y+  L K     DA IL  L RT      AE+  D  K+ L    
Sbjct: 814  HIYAELKQFTKAIESYEIALGKEGKAKDANILSCLGRTWLNKGRAERNLDAYKTALEYAQ 873

Query: 730  RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAA 787
            + + +AP     +F+      + ++  + L + +RT+ ++    + LE+A+     ++A+
Sbjct: 874  KTLEVAPEQVHFKFNVAFVQIQLASFINGLPEHQRTSTQLEEAASGLESAITALDEIAAS 933

Query: 788  SNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAERE-EQQNRQRQEAA---RQAALAE 842
             +      D E++ N      +  L+ A     A++RE E +N+++ + A   RQAAL +
Sbjct: 934  DHPPYPKHDIEQRANMARNTQRKQLERAL----ASQREYESKNKEKLQVALEQRQAALKK 989

Query: 843  EARRKAEEQKKYLL-------EKRKLEDEQKRLRQQE-------------------EHFQ 876
            +      ++++          E+ ++    ++L +Q                    E  +
Sbjct: 990  KEEEIRRKEEEERERQEKIKREREEIAARDRKLAEQRLEEERQRQEAEMTTDSETGEKSK 1049

Query: 877  RVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKK 918
            R K +  SSTPA  +RER        G  EKR RKG  ++KK
Sbjct: 1050 RQKMKKASSTPA--KRER--------GGEEKRERKGRAQKKK 1081


>gi|347835077|emb|CCD49649.1| similar to RNA polymerase II transcription elongation factor (Ctr9)
            [Botryotinia fuckeliana]
          Length = 1234

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 247/1078 (22%), Positives = 427/1078 (39%), Gaps = 218/1078 (20%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE---- 60
            Y KQ KV+   ++L +G S            ER+++L  L   Y +  K   + R     
Sbjct: 85   YAKQKKVDHAIEMLTKGQSA-----MRGGNKERLSMLTCLCWMYLWKSKEAPRHRPDSVE 139

Query: 61   -------KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL-------------AKGEVE 100
                   KE+   +AT   N ASRI+   P  ++ +G L L             A G ++
Sbjct: 140  HGEEIKTKEDWLKMATSNLNDASRINPSFPPLFLARGVLQLLRASTRPFPRNNTAPGALD 199

Query: 101  Q--------ASSAFKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
                     A  +F+  ++A    N+ A+LG+A   ++ G+Y+++LE Y+ AL+  P   
Sbjct: 200  PEKAELLRGAQKSFEDAIKASHGRNMLAVLGKARAAYSMGKYAEALEGYQEALRSMPDLV 259

Query: 152  GA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANEAAG---- 204
                R+GIG C ++LG    A+ A++R+L+++P++  A + LA   +D  A+        
Sbjct: 260  DPDPRIGIGCCFWQLGFKEDAKAAWERSLEINPDSKVANILLAQFYLDQSAHVPTNSPEF 319

Query: 205  ---IRKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
                +K M E  QR+++      +     A +F        VE L + A+  T+     S
Sbjct: 320  IQLYKKAMTEYTQRSYKADKDMPLTCATFAGYFLSRKSMPNVEALAQKAIQYTDVNAIAS 379

Query: 261  HSYYNLARSYHSKGDYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
              +Y LAR  H   +YEKA  YY  A          ++   +G  Q+ +  GDF  A   
Sbjct: 380  DGWYLLARKEHFDDNYEKALDYYGRADDARGGADRGYMPAKFGAAQLSVLKGDFGEAKLR 439

Query: 320  FEKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAA 358
             EK+++    N E +  LG +Y +                     +G +E  +   +   
Sbjct: 440  LEKIIQ-QSKNIEAMILLGTLYAEEVFSSQESGVKEDKTTEYKKAVGYLENVRTAWKDPK 498

Query: 359  KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL----------LKKAGEEVPI----- 403
            K    DA   ++L  L  +     +L   +    +           ++ G+EV       
Sbjct: 499  KNLVPDASVLLNLARLYETEQPEKSLQCLQQVEQIEFDQIPAADKPEETGDEVAYKNTMR 558

Query: 404  -----EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
                 ++LNNIG  +++  +++ A + F+ AL        + +  K   +D  A +    
Sbjct: 559  ENLSPQLLNNIGCFYYQSEKYDLAREMFQAALN-----ACVKAGEKLEGMDTDALV---- 609

Query: 459  DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                                  T+ FNL R  E       A  +Y  +L ++ DY DA  
Sbjct: 610  ---------------------TTISFNLGRTYEASGMPDEAKTVYEGLLGRHSDYTDAKT 648

Query: 519  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAKETFR 572
            RLA IA  R+  +              + P A+S L      DLE++    W   +   R
Sbjct: 649  RLAYIALRRDRTE--------------EGPKAVSALYKESSADLEVRALYGWYLGRMHSR 694

Query: 573  AASDAT----------------DGKDSYATLSLGNWNYFAA---LRNEKRAPKLEATHLE 613
              S                   D  D YA + +GN N  AA    R+ +   +  +    
Sbjct: 695  KRSSNVNEDPEYRHYKHTLQQYDKHDRYALIGMGNLNLMAAREMRRDSESDKQARSKTYT 754

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVW 672
            KA E + + +     + YAA G  + L E K     +  +F +V++       V+ P V+
Sbjct: 755  KAVEFFDKALQLDPKSAYAAQGIAIALVEDKKDSKTALPIFLKVRDT------VKDPSVF 808

Query: 673  INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL---- 728
            +NL H++     ++ A++ Y+  L K   + D+ IL  L RT     +      S     
Sbjct: 809  VNLGHIFAESRQYSKAIEHYEAALTKDRAH-DSHILTCLGRTWLSKGKGDKSLSSFKSAL 867

Query: 729  ---LRAIHLAPSNYTLRFDAGVAMQKFSAST----LQKTRRTADEVRSTVAELENAVRVF 781
               L+A+ ++P     +F+  VA  +   +T    L +T+R+ +EV+     LE A+   
Sbjct: 868  DYSLKALEISPEQVHYKFN--VAFVQLQLATMIYNLPETQRSLEEVQGAAKGLEEAIEAL 925

Query: 782  SHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAA----- 835
              ++   N      D E++ N      +  L+ +    +A +  E++N  + +AA     
Sbjct: 926  DAIAKHPNPPYPKHDIEQRANMARNTMRRQLERS---MQAQKEYEEKNASKIQAAKEQRE 982

Query: 836  -------------------RQAALAEEARRKAEEQKKYLLEKRKLED---EQKRLRQQEE 873
                               R+A +AEE R+K  E+ + L + R  +D   E   +    E
Sbjct: 983  AELRRREEVREAAVRAENERKAKIAEE-RQKIAERDRELAQARAADDIARENADMTTDSE 1041

Query: 874  HFQRVKE----QWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYE 927
              +R+K     + RS     K++E    DD++ G  E   R   K RK  + S S  E
Sbjct: 1042 TGERIKRKKIPKGRSGGGKRKKKEDGITDDEDSGGEEGGSRSQKKGRKARRGSGSEEE 1099


>gi|262302911|gb|ACY44048.1| SH2 domain binding protein [Eurytemora affinis]
          Length = 178

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 113/178 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A   F  VL  +  ++P+LLG+AC+ FN+  Y ++L +YK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADQQFNFVLSQNPSSIPSLLGKACIAFNKKDYKNALAYYKKALRTNPKCPANVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL+LDP+ V A+V +AV+ L + E   IR G++K+ RA+ I   
Sbjct: 61  FLKLGNPDKARLAFERALELDPDCVGAMVGIAVLQLNSQEPENIRDGVQKLSRAYGIDSQ 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR +H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLALHAFHSTENELMRAESCYQLARCFHVQHDYDQA 178


>gi|396495033|ref|XP_003844448.1| hypothetical protein LEMA_P020990.1 [Leptosphaeria maculans JN3]
 gi|312221028|emb|CBY00969.1| hypothetical protein LEMA_P020990.1 [Leptosphaeria maculans JN3]
          Length = 1180

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 211/862 (24%), Positives = 359/862 (41%), Gaps = 159/862 (18%)

Query: 36  ERIAILNALGVYYTYLGKIETKQREKEE------------HFILATQYYNKASRIDMHEP 83
           +R++ILN  G+ + YL K     R K++            +   AT   N ASRI    P
Sbjct: 108 DRLSILN--GLCWLYLLKCREAPRTKQDSQTDPDVKLKDYYLQAATSVLNDASRISPSHP 165

Query: 84  STWVGKGQLLLAKGEVE--------------------QASSAFKIVLEADRD-NVPALLG 122
             ++ +G L L +  ++                    QA+  F+  L A    N+ A +G
Sbjct: 166 PLFLARGVLYLLRASLQGPATTAGPNAVSPERMETLKQAAKCFEDALRASGGRNLMAKMG 225

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           +A V ++ G+++D+L+ Y+  L+  P    P   R+GIG C ++LG    A  A+QR+L+
Sbjct: 226 KARVHYSMGKWADALKGYQNILESSPDMLDPDP-RIGIGCCFWQLGFKHDAAGAWQRSLE 284

Query: 181 LDPENVEALVALAV--MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT-- 236
           L+P++  AL  L +  + L A+ ++   K +E  ++A   Y   +  L+   N F  T  
Sbjct: 285 LNPKSKIALTLLGIYNLHLTASYSSTDPKFVELYKKAINQYIVPSTKLD---NQFPLTCA 341

Query: 237 --GQHFLV-------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
             G HFLV       E +   A+++T+     S  ++  A+  H + D  KA  YY  S 
Sbjct: 342 TLGSHFLVRRDFAKTETVAMRAISLTDTNAIASDGWHLRAKKAHHEEDIAKAAEYYSKSD 401

Query: 288 K-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--- 343
           +    +   FI   +GL Q+ + + ++  A    EK+L+  P   E    LG +Y +   
Sbjct: 402 QARGGEERGFIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-VLEAQTLLGTLYAEDVF 460

Query: 344 LGQIEKAQE----LLRKAAKI---------DPR-----DAQAFIDLGELLISSDTGAALD 385
             Q  K+ E     LRKA K          DP+     D    ++L  L        +L 
Sbjct: 461 AAQNSKSTEDKSAELRKALKYLETVQSAWKDPKRKAVPDQSVLLNLARLYEIDHPEKSLR 520

Query: 386 AFKTARTLLKKA--------GEEVPIEV------------LNNIGVIHFEKGEFESAHQS 425
             +    +   A        G E PI+V            LNN+G  H++   F +A + 
Sbjct: 521 CLEEVEQMELDAIPEEDYPEGIEDPIQVKAALREFLPPHLLNNMGCFHYQADRFVTAREF 580

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
           F+ AL        + ++++   ID  A +                          ++ +N
Sbjct: 581 FQTALN-----ACVKAESRDEGIDTDALV-------------------------TSISYN 610

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
           LAR  E       A  +Y  +L ++ DY+DA LRLA I+   N        V +  K N 
Sbjct: 611 LARTYEAEGMWKDARSVYDSLLQRHGDYIDARLRLAYISLRENPEGEGPRAVKDLFKANE 670

Query: 546 KYPNALS----MLGDLELKNDDWVKAKET--FRAASDATDGKDSYATLSLGNWNYFAALR 599
                 +    ML   + +   +V  +E   ++      D  D+Y+ + +GN    A  R
Sbjct: 671 DNTEVRALYGWMLNKTKRRTSQFVTDEEQRHYKHTLQKFDKHDAYSLMGMGNIT-LAIAR 729

Query: 600 NEKRAPKLEA----THLEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFT 654
              R+ + E        E+A E + +V+     N YAA G  + L E K  +  +  +FT
Sbjct: 730 EMPRSSEQEKEKRRKQYERAVEFFEKVLQIDPRNAYAAQGIAIALVEDKRDYSTALQIFT 789

Query: 655 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART 714
           +V+E       ++   V+ NL H Y     +  A++ Y+  L +   N D +IL  L RT
Sbjct: 790 KVKET------LKDHSVYTNLGHTYCEIKQYNRAIENYEAALARDRQN-DPKILQCLGRT 842

Query: 715 HYEAEQWQDCKKSLLRA-------IHLAPSNYTLRFDAGVAMQKFSAST----LQKTRRT 763
            Y   + ++       A       + + P++ + +F+  VA  +F  +T    L + +RT
Sbjct: 843 WYLRARHENSMAGFRTALDYSKQVLSIMPTDLSAQFN--VAFLQFQVATVLYNLPENQRT 900

Query: 764 ADEVRSTVAELENAVRVFSHLS 785
            +EV S +  L  A+     L+
Sbjct: 901 LEEVDSAIVGLAEAIDTMDKLA 922


>gi|400599130|gb|EJP66834.1| RNA polymerase II-associated protein [Beauveria bassiana ARSEF 2860]
          Length = 1198

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 243/1018 (23%), Positives = 433/1018 (42%), Gaps = 153/1018 (15%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK---------IE 55
            Y KQ K++   ++L  G    I    ++ R ++++++  L   Y +  +         + 
Sbjct: 81   YAKQHKIDHAIEMLLRGGG-AIQSNASNPR-DKVSMICCLCWMYLWKSREAPRVAPDGVR 138

Query: 56   TKQREKEEHFI-LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS----------- 103
              + + +EH++ LAT   N A+R++   P  ++ +G LLL +  ++  S           
Sbjct: 139  LSEAKTKEHYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGTEKQ 198

Query: 104  ----SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
                +A K   +A R     N+ AL+G+A   F++ +Y DSL  Y+  LQ  P       
Sbjct: 199  ELLKTAVKSFDDALRVSQGKNMLALMGKARAFFSQQKYPDSLAIYQDVLQKKPDLVDPDP 258

Query: 155  RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
            R+GIG C ++LG    A+ A++R+L+++P++    + L +  L A+    +         
Sbjct: 259  RIGIGCCFWQLGFKKDAKTAWERSLEINPDSKVPNILLGLYYLDASGHVPVNSEDFVKLY 318

Query: 206  RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
            +K M E  Q++F++     +  +  +N+F         ++L   A+  T+     S  +Y
Sbjct: 319  KKAMTEYTQKSFKLDKNLPLTCSTFSNYFLSRKSWDNADKLAHKAIQYTDVNAIASDGWY 378

Query: 265  NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKV 323
             LAR  H  GD + A  +Y  +           FP  +G  Q+ +   D   A    EK+
Sbjct: 379  VLARKAHYNGDTDNANDFYRRADDARGGTDTGYFPAKFGAAQLSVLKNDLGEAKLRLEKM 438

Query: 324  LEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR--- 363
            ++    + E +  LG +Y +                +++KA  LL   R A K DP+   
Sbjct: 439  IQ-QSKSHEAMILLGTLYAEEIFASQTSDVKEDKSAEMKKAINLLEAVRNAWK-DPKRNA 496

Query: 364  --DAQAFIDLGELLISSDTGAALDAFKTARTL----------LKKAGEE----------V 401
              DA   ++L  L  + +   AL   +    L           +   EE          +
Sbjct: 497  SPDASVLLNLARLYETENPEKALQCLQQVEQLELEQIPTSEYPEGVTEEAEVQAAIRKFL 556

Query: 402  PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
            P ++LNNIG  HF+  +   A + F+ ALG  + ++  D    T  + +S S        
Sbjct: 557  PPQLLNNIGCFHFQAEKHVLASEMFEAALGACMKMSEKDGTVDTDALVSSIS-------- 608

Query: 462  LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                                  FNL R  E    +  A  +Y  +L ++ DY DA  RLA
Sbjct: 609  ----------------------FNLGRSYEAQGLSDKAVEVYEGLLNRHDDYTDARARLA 646

Query: 522  AIAKARNNLQLSIELVNEALKVNGKYPNALSM----LGDLELKNDDWVKAKETFRAASDA 577
             I   ++  +   + V +  + N       ++    LG +  K    V     FR     
Sbjct: 647  YIKLRQSPNKEGPDAVAKLYQENTSDVEVRALYGWYLGKVSRKRPGNVAEDPEFRHYKHT 706

Query: 578  T---DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHTSNLY 631
                D  D YA + +GN +   A  +R E  A K + +    KA E + + +     N Y
Sbjct: 707  LQNYDKHDRYALVGMGNLHMMQAREMRRETDADKQKRSAAYGKAVEFFEKALSLDPKNAY 766

Query: 632  AANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 690
            AA G  + L E K  +  +  +F +V+E       ++ P++++NL H+Y     F+ A++
Sbjct: 767  AAQGVAIALVEDKKDYKNALAIFNKVRET------IKEPNLYVNLGHIYAELKQFSKAIE 820

Query: 691  MYQNCLRKFYYNTDAQILLYLARTHYE---AEQWQDCKKSLL----RAIHLAPSNYTLRF 743
             Y+  L K     +  IL  L RT      AE+  D     L    +A+ +AP     +F
Sbjct: 821  SYEIALSKEGKQNEPVILACLGRTWLNRGRAERDIDAYSKALECAEKALKVAPEQIHYKF 880

Query: 744  D-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKI 800
            + A V +Q  +A   +++ +RTA+++      LE A+     ++A         D E++ 
Sbjct: 881  NVAFVQIQLVTAIQGIEENKRTAEQLEKAAEGLEAAIESLDAIAAHPQTPYPKHDVEQRA 940

Query: 801  NTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRK 860
            N      +  L+ A I ++  +  E+ N+++  AA+    AE  RR+A+  +  +L K K
Sbjct: 941  NMARNTLRKQLERA-IGKQ--KEWEEVNKEKIAAAKSQREAEIKRREAD--RAEVLAKEK 995

Query: 861  LEDEQKRLRQQEEHFQRVK---EQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
             E + K  +++EE   +VK   E+      A + R+ +E  +DE G+  KR+RK   R
Sbjct: 996  -ERQDKIRKEREEMAAKVKLETEERERELEAERARKEAEMTEDEEGNKVKRKRKPAPR 1052


>gi|157939609|gb|ABW05529.1| SH2 domain binding protein [Speleonectes tulumensis]
          Length = 177

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 113/177 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +PSCP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSLNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPSCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KA+ AF+RAL LD + V ALV LA+++L    +  I+ G++ + RA+ I   
Sbjct: 61  FLKLGNPEKAKLAFERALDLDSKCVGALVGLAILELNHQNSESIKNGVQMLSRAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQ 177


>gi|157939603|gb|ABW05526.1| SH2 domain binding protein [Narceus americanus]
          Length = 177

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 112/177 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLGQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG+  KAR AF RAL LD + V ALV LAV++L       IR G++ + +A+ I   
Sbjct: 61  FMKLGKPDKARLAFDRALTLDSQCVGALVGLAVLELNNKTTDSIRNGVQMLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQ 177


>gi|157939597|gb|ABW05523.1| SH2 domain binding protein [Limulus polyphemus]
          Length = 177

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 112/177 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+  P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDFRGALAFYKKALRTSPKCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            YKLG+  KA+ AF+RALQLDP+ V ALV LAV++L    +  IR G++ + +A+ I   
Sbjct: 61  FYKLGKHEKAKLAFERALQLDPQCVGALVGLAVLELNLKSSESIRNGVQMLSKAYRIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             M LN+LANHFFF   +   + L   A   T +   ++ S Y LAR++H   DY++
Sbjct: 121 NPMVLNHLANHFFFKKBYGKXQHLALXAFHNTENEXMRAXSCYQLARAFHIXQDYDQ 177


>gi|170093251|ref|XP_001877847.1| RNA polymerase II-associated protein [Laccaria bicolor S238N-H82]
 gi|164647706|gb|EDR11950.1| RNA polymerase II-associated protein [Laccaria bicolor S238N-H82]
          Length = 1095

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 242/1050 (23%), Positives = 418/1050 (39%), Gaps = 207/1050 (19%)

Query: 4    EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK------ 57
            EY+++G +E   +I           Y A   ++   + N+L   Y  L  I+        
Sbjct: 55   EYWRRGYLEAAEKI----------AYCAIESFQSSGLTNSLHPIYALLANIQIAYARKAP 104

Query: 58   --------------QREKEEHFILATQYYNKASRIDMHEPSTWVG------KGQLLLAKG 97
                          ++ KE+++  A Q+ N   R          G      +G   LA  
Sbjct: 105  KLVLADARQDVMKDEKSKEDYYREAAQFLNTGERFGAESGEGVSGTLAFLTRGIQQLATR 164

Query: 98   EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
             ++ A  +F+ VL     N+ ALLG+A + + +  Y ++L  ++  L+ +P C    R+G
Sbjct: 165  SMDDALRSFEGVLVEKPTNLVALLGKARILYAKRNYREALRLFQDVLKYNPQCIPDPRVG 224

Query: 158  IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK---------G 208
            IGLC + +    KA+ A+QR+L+++P    A + L +  + ++++  + +         G
Sbjct: 225  IGLCLWAMDHKAKAKAAWQRSLEVNPSEWAAQLLLGLESINSSKSEHLTEAEKTHTFLSG 284

Query: 209  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE------------------QLTETAL 250
             + +++AF+     A A N L   F   G H  V                   +L E  +
Sbjct: 285  TKMIEKAFKANQRSAAAANALCELFLRKGDHQRVNLSSFPVVLGWLTLIDEALKLAERTI 344

Query: 251  AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
               +     +  Y   AR  H++G Y +A  +Y A+ +   +P + I    G+ Q+Q++ 
Sbjct: 345  QFADTLTLLTEGYLRAARVSHAEGSYAQATKFYTAAGE--GQP-KHIIGAIGMAQMQMQN 401

Query: 311  GDFRSALTNFEKVLEIYPDNCETLKAL-------GHIYVQLGQIEKAQELLR-------- 355
             +  +A+   + +L+  P+   +L+A         H    +   + AQE LR        
Sbjct: 402  DEMAAAIHTLDTLLQA-PNPQRSLEATVMLASLRAHPRPGVSSSDVAQERLRARELFDRV 460

Query: 356  -KAAKI-DPRDAQAFIDLGELLISSDT-----------GAALD----AFKTARTLLKKAG 398
             K  +I D R           LIS D            G +LD    A K A  + +  G
Sbjct: 461  CKGLEIEDARANGKASSRSSRLISDDVDMHVEIARLWQGESLDRMGRALKEALRISEATG 520

Query: 399  EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
            E  P  ++NN+G ++  +G F  A   ++ AL           +T     D S +M    
Sbjct: 521  EPDP-RLMNNLGALYHLEGNFSEARSLYESAL----------IRTSKLTSDVSEAM---- 565

Query: 459  DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                                  ++L+NLAR+ E   +   A   Y  +L ++ +YVDA +
Sbjct: 566  --------------------STSILYNLARVYEDEGEESLAKDAYEKLLSRHPEYVDAKI 605

Query: 519  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 578
            R A +    N    + EL+ ++L       N  +      ++ +    AKE   A     
Sbjct: 606  RQAKMLSNLNRNNDAHELLKQSLSSQNHNLNLRAFYTYFLIQTNLPRPAKEIVFATLKDH 665

Query: 579  DGKDSYATLSLGNWNYFAALRNEKRAPKLEATH-----LEKAKELYTRVIVQHTSNLYAA 633
            D  D Y+  + G W  +   R E R    +         ++  E Y + +       +AA
Sbjct: 666  DKHDIYSLCAAG-WIMYHQSR-ESRDTSTKGVEERKRGFQRTAEFYEKALQLDPMCAFAA 723

Query: 634  NGAGVVLAEK------GQFDV------------SKDLFTQVQEAA-SGSVFVQMPDVWIN 674
             G  +V AE       G F              + D+F +V+E+   GSV+        N
Sbjct: 724  QGLAIVTAEDALGSLGGAFGPDDHLKRMTNSRDALDIFAKVRESMHDGSVY-------FN 776

Query: 675  LAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLLR- 730
            + H Y+A+  F  A++ Y+    +FY   +  +LL L R+ Y     +Q      + LR 
Sbjct: 777  MGHCYYARDEFDRAIESYETASTRFYGGHNVPVLLCLCRSWYAKATKDQNPSAMNTALRY 836

Query: 731  ---AIHLAPSNYTLRFDAGVAMQK-----FSASTLQKTRRTADEVRSTVAELENAVRVFS 782
               A+HL P++    ++  +  QK     FS S     +RT  +++  +A+  +A ++F+
Sbjct: 837  AQAALHLQPNDKATIYNIAMIQQKSAEMMFSTSP---AKRTLKDLQRVIAQAAHAQKLFA 893

Query: 783  HLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQ-EAARQAALA 841
             L A     +  +     +   +Y  ++L     H E         +QRQ EA  QA L 
Sbjct: 894  SL-AGDKAQMVPYSRDIADQRRKYGDNMLRKGDEHLE---------KQRQFEADTQAKL- 942

Query: 842  EEARRKAEEQKKYL--LEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDD 899
            EEARRK +E+K  L  LE+ ++E     LR + E     +   R       R  + E+D 
Sbjct: 943  EEARRKRQEEKDRLEDLERARMET----LRVEAEKLAEERRLAREQAMEWTREVKMESD- 997

Query: 900  DEVGHSEKRRRKGGKRRKKDKSSRSHYETE 929
                  E+R RK  K RK      S  E E
Sbjct: 998  ------EERERKTKKVRKPKNDVGSGEEAE 1021


>gi|85083950|ref|XP_957219.1| hypothetical protein NCU00095 [Neurospora crassa OR74A]
 gi|28918307|gb|EAA27983.1| hypothetical protein NCU00095 [Neurospora crassa OR74A]
          Length = 1279

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 232/975 (23%), Positives = 404/975 (41%), Gaps = 195/975 (20%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK----------I 54
           Y KQ K++   ++L +G+    +   A+   E+++I++AL   Y +  +          +
Sbjct: 88  YAKQKKIDFAIEMLIKGA----NAMQANNPREKLSIVSALCWMYLWKSREAPRVAPEDAL 143

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA--------- 105
            ++ + KE +  LATQ  N+ASRI+   P  ++ +G L L +  ++  S A         
Sbjct: 144 VSEAKTKEYYLQLATQSLNEASRINPAFPPLFLARGVLQLLRASLQPPSKAPGAVDPEKT 203

Query: 106 --FKIVLEADRD--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
              +  L++  D        N+ A++G+A   F+ GRY+D+L  Y+ AL   P       
Sbjct: 204 ETLRAALKSFDDALRVSSGKNMLAVIGKARALFSLGRYADALVAYQDALARAPDLVDPDP 263

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
           R+GIG C ++LG    AR A++RAL+++ E+    + L +  L A+    I         
Sbjct: 264 RIGIGCCFWQLGYKDDARIAWERALEINAESKVGNILLGLYYLDASGHVPINSPEFIKLY 323

Query: 206 RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +K M E  Q+++++     +     A++F    Q   VE L   A+  T+     S  +Y
Sbjct: 324 KKAMTEYTQKSYKLDKDLPLTCATFASYFLSRKQFDHVEALAHKAIQFTDVNAIASDGWY 383

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKV 323
            LAR  H   + E+A  YY  +            P  +G  Q+ +   D   A    EK+
Sbjct: 384 LLARKEHYANNLERAADYYRRADDARGGTERGYLPAKFGAAQLSVIKNDLGEAKLRLEKM 443

Query: 324 LEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR---- 363
           ++    N E +  LG++Y +                + +KA  LL   + A  DP+    
Sbjct: 444 IQ-QSKNYEAMILLGNLYAEEVFANQFAPVKEDKSAEAKKAISLLESVRTAWKDPKKSLA 502

Query: 364 -DAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKAGEE-VP 402
            DA   ++L  L  + +   AL   +    L                   +K A    +P
Sbjct: 503 PDAAVLLNLARLYETENPDKALQCLQQVEQLELDQVPQSERPDEVEGEAAIKAALRRFLP 562

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
            ++LNNIG  ++++ + E A + F+ AL   + +   D  T T   DA  +         
Sbjct: 563 PQLLNNIGCFYYQEEKHELASELFEAALSSCMRIGEKDDDTDT---DALVT--------- 610

Query: 463 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                             T+ FNL R  E    +  A  +Y  +L ++ DY DA  RLA 
Sbjct: 611 ------------------TISFNLGRSYEARGMSEKAVEVYEGLLKRHDDYTDARTRLAY 652

Query: 523 IAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAKETFRA--- 573
           I K RNN                + P+A++ L      DLE++    W   K + R    
Sbjct: 653 I-KLRNN------------PGTKEGPDAVAKLYQENSSDLEVRALYGWFLGKLSSRKRPN 699

Query: 574 --ASDAT-----------DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKE 617
             A D             D  D YA + +GN +  +A  +R E  A + + +    +A E
Sbjct: 700 NIAEDPEQRHYKHTLQNYDKHDRYALVGMGNLHLISAREMRRESEADRQKRSAAYSRAVE 759

Query: 618 LYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 676
            + + +     N YAA G  + L E K  +  +  +F +V+E       ++   V++NL 
Sbjct: 760 FFDKALQLDPKNAYAAQGIAIALVEDKKDYKGALQIFIKVRET------IKDVHVFVNLG 813

Query: 677 HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL---- 729
           H+Y     F  A++ Y+  L K     DA IL  L RT      AE+  D  K+ L    
Sbjct: 814 HIYAELKQFTKAIESYEIALGKEGKAKDANILSCLGRTWLNKGRAERNLDAYKTALEYAQ 873

Query: 730 RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAA 787
           + + +AP     +F+      + ++  + L + +RT+ ++    + LE+A+     ++A+
Sbjct: 874 KTLEVAPEQVHFKFNVAFVQIQLASFINGLPEHQRTSTQLEEAASGLESAITALDEIAAS 933

Query: 788 SNLHLHGFDEKKINTHVEYCKHLLDA-AKIHREAAEREEQQNRQRQEAARQAALAEEARR 846
                          H  Y KH ++  A + R         N QR++  R  A   +   
Sbjct: 934 D--------------HPPYPKHDIEQRANMAR---------NTQRKQLERALASQRDYES 970

Query: 847 KAEEQKKYLLEKRKL 861
           K +E+ +  LE+R++
Sbjct: 971 KNKEKLQLALEQRQV 985


>gi|262302969|gb|ACY44077.1| SH2 domain binding protein [Scolopendra polymorpha]
          Length = 178

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 114/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG+  KAR AF+RALQLD + V ALV LAV++L       IR G++ + +A+     
Sbjct: 61  FLKLGKPDKARFAFERALQLDIQCVGALVGLAVLELNNKTPESIRNGVQMLSKAYATDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A+  T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAIHNTENEAMRAESCYQLARAFHVQSDYDQA 178


>gi|116208102|ref|XP_001229860.1| hypothetical protein CHGG_03344 [Chaetomium globosum CBS 148.51]
 gi|88183941|gb|EAQ91409.1| hypothetical protein CHGG_03344 [Chaetomium globosum CBS 148.51]
          Length = 1061

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 211/845 (24%), Positives = 351/845 (41%), Gaps = 158/845 (18%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV------------ 99
           G + +  + KE +  LATQ  N ASRI+   P  ++ +G L+L K  +            
Sbjct: 134 GSLVSDAKTKEYYLQLATQSLNDASRINPAFPPLFLARGVLILLKASLQPSSKAPGAVDS 193

Query: 100 ---EQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
              EQ  +A K   EA R     N+ A++G+A   F+ GRY D+L  Y+  +Q  P    
Sbjct: 194 RKSEQLRNALKSFEEAIRVSQGKNMLAVMGKARALFSLGRYPDALSAYQEVVQKMPDLVD 253

Query: 153 A-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGI 205
              R+GIG C ++LG    A+ A+ R L+++P++  A + L +  L A      N    I
Sbjct: 254 PDPRIGIGCCFWQLGYKDDAKLAWDRCLEINPDSKYANILLGLYHLDASGHVPTNSPEFI 313

Query: 206 R---KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
           R   K M E  Q++F++     +     A +F    Q   V+ L   A+  T+     S 
Sbjct: 314 RLYKKAMTEYTQKSFKLDKNLPLTCATFAGYFLSRKQFANVDSLAHKAIEYTDVNAIASD 373

Query: 262 SYYNLARSYHSKGDYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
            +Y LAR+ H  GD EKA  YY  A          ++   +G+ Q+ +   D   A    
Sbjct: 374 GWYLLARTEHHNGDLEKASDYYRRADDARGGTDRGYLPAKFGVAQLSVLKNDLGEAKLRL 433

Query: 321 EKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAK 359
           EK+++ +  N E +  LG +Y +                     LG +E  +   + + K
Sbjct: 434 EKMIQ-HAKNYEAMILLGTLYAEEVFANQAAAVKEDKSAEAKKALGLLEGVRSAWKDSKK 492

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE------------------ 400
               DA   ++L  L  +     AL   +    L +++  +                   
Sbjct: 493 NLAPDAAVLLNLARLYENESPDKALQCLQQVEQLEMEQVPQSEYPADTEDEAATRAAIRK 552

Query: 401 -VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 459
            +P ++LNNIG  + + G+   A + F+ AL                  D+ A + Q   
Sbjct: 553 LLPPQLLNNIGCFYSQDGKHHLATEFFQAAL------------------DSCARISQ--- 591

Query: 460 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
                  END   +++     T+ FNL R  E   D   A   Y  +L ++ DY DA  R
Sbjct: 592 ------TEND---LDIDALLTTISFNLGRSYEYEGDADTAIKTYEQLLSRHSDYTDARTR 642

Query: 520 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETF 571
           LA I K R N              N + P+A++ L      DLE++    W   K     
Sbjct: 643 LAYI-KLRKN-------------PNKEGPDAVAKLYQENSSDLEVRALYGWFLGKVNSKK 688

Query: 572 RAASDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEK 614
           R A+ A D +              D YA + +GN +  +A  +R E    K + +    +
Sbjct: 689 RPANIAEDPEQRHYKHTLQNYDKHDRYALVGMGNLHLMSAREMRRETEQDKQKRSAAYNR 748

Query: 615 AKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
           A E + + +     N YAA G  + L E +  +  +  +F +V+E       +Q   V++
Sbjct: 749 AVEFFDKALQLDPKNAYAAQGVAIALVEDRKDYKNALQIFIKVRET------IQDAHVYV 802

Query: 674 NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE---AEQWQDCKKSLL- 729
           NL H+Y     F+ A++ Y+  L K     DA I+  L RT      AE+  D  K  L 
Sbjct: 803 NLGHIYAELRQFSKAIESYELALTKEGKANDAGIISCLGRTWLNKGRAERNLDAYKMALD 862

Query: 730 ---RAIHLAPSNYTLRFD-AGVAMQ-KFSASTLQKTRRTADEVRSTVAELENAVRVFSHL 784
              +A+ +AP     +F+ A V +Q   +  +++ + RT+ ++      LE A++    +
Sbjct: 863 HAKKALAVAPDQLHFKFNVAFVQIQVALTLHSMRDSERTSFQLEEAAEGLEAAIKALDEI 922

Query: 785 SAASN 789
           +A+ +
Sbjct: 923 AASPS 927


>gi|262302959|gb|ACY44072.1| SH2 domain binding protein [Polyxenus fasciculatus]
          Length = 178

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 114/178 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL  + +++P+LLG+AC+ FN+  Y  +L +YK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQNPNDIPSLLGKACIAFNKKDYRGALAYYKKALRTNPKCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KL +  KAR AF RAL+LD   V ALV LA++++    A  IR G++ + +A+ I P 
Sbjct: 61  FMKLNRQDKARLAFDRALELDGNCVGALVGLAILEINFKSAESIRNGVQLLSKAYTIDPM 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYEKVQHLAMHAFHNTENEAMRAESCYQLARAFHVQGDYDQA 178


>gi|262302963|gb|ACY44074.1| SH2 domain binding protein [Prokoenenia wheeleri]
          Length = 178

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 110/178 (61%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+  P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTKPGCPAXVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            YKLG++ KAR AF+RALQLD   V A V LAV++L       IR G++ +  A+ I   
Sbjct: 61  FYKLGKVDKARLAFERALQLDQTCVGAFVGLAVLELNLKTPDSIRNGVQMLSHAYTIDXT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V  L   A   T +   ++ S Y LAR++H +GD+++A
Sbjct: 121 NPMLLNHLANHFFFKKDYAKVXHLALHAFHNTENEAMRAESCYQLARAFHIQGDFDQA 178


>gi|213401323|ref|XP_002171434.1| tetratricopeptide repeat protein [Schizosaccharomyces japonicus
           yFS275]
 gi|211999481|gb|EEB05141.1| tetratricopeptide repeat protein [Schizosaccharomyces japonicus
           yFS275]
          Length = 1044

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 223/914 (24%), Positives = 386/914 (42%), Gaps = 134/914 (14%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNA-LGVYYTYLGKIETKQR--E 60
           EY  +G  EQ   IL +G     D+       E  A  NA L   Y    ++  + R   
Sbjct: 59  EYITRGMSEQAISILTKGLEVLTDD-------ESQAAFNAYLAAIYMQQARLAGRTRGAN 111

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----VEQASSAFKIVLEADRD 115
           +EE+   A  + +K S          + +    + K       ++ A   +  VL+    
Sbjct: 112 REEYLNRAQSFLDKISGSHRQWDPALLLQATFGIMKSPKSNSTLDAALHGYDRVLQKSGA 171

Query: 116 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           NV AL+G+A V +++  +  +L+FY+RAL  +PS     R+GIGLC ++L    +A  A+
Sbjct: 172 NVFALMGKALVLYHKKNFRSALKFYQRALVSNPSFQPDPRIGIGLCFWQLDMKEEAHAAW 231

Query: 176 QRALQLDPEN--VEALVAL-----AVMDLQANE-AAGIRKGMEKMQRAFEIYPYCAMALN 227
            RA +L+P N  +   ++L     A  +L   E  A   + +   Q+AF+  P  A+A  
Sbjct: 232 TRAQELNPSNYAIGTYLSLYHYDRAFKNLGTEEFVANYSQALNYTQKAFKACPTNAVAAC 291

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS---YYNLARSYHSKGDYEKAGLYYM 284
            LA  F +T ++  +E   + A AV ++  T S S   Y+ + R+YH  G Y++A   Y 
Sbjct: 292 ILAG-FTYTKKN--LEACIKLANAVVHNAFTPSLSADGYFWMGRAYHQLGKYDEAMKCYQ 348

Query: 285 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
            + + I   H  +  Y G+GQ+Q+   D+ SA   FE++ E  P   E L  LG +    
Sbjct: 349 QA-RSIQDNH--LLSYMGIGQIQILQSDYTSAKLTFERISEQAPKCAEALIILGCLNASD 405

Query: 345 GQIEKAQE--LLRKAAKI-----DPR--DAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
            + + A+   LL +A  I      PR  D+   I    L    D   +L   + A   ++
Sbjct: 406 PKADPAKPKMLLERAFNILSSSKIPRVVDSDLLITQARLWEKDDASKSLKYLEKALAFIR 465

Query: 396 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 455
            A      E+LNN+GV+ ++   +  A + F+ A              KT + +      
Sbjct: 466 DAQMVETPELLNNVGVLEYQLFNYGDALKHFEAA--------------KTVMTEG----- 506

Query: 456 QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD 515
                       NDG        +V + +N+AR  EQ+     A  +YR +L +  ++ D
Sbjct: 507 ------------NDG-------FRVLLTYNIARCKEQLGQLQEAEKMYRDVLQERPEFSD 547

Query: 516 AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS 575
           A +RL  +  A N    + + + + +  +G+     +  G        W  +K+  R A 
Sbjct: 548 ARVRLCLLELA-NPTDATFKTIRQLMTNDGENLEVRAFFG--------WYLSKQKRRPAE 598

Query: 576 DATD----------GKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRV 622
           D               D+Y+ + LGN     A  LR    A K++   L  KA + + + 
Sbjct: 599 DPELRHCSQTLRHWHDDTYSLVQLGNAYLRQARELRVASPADKVKRQKLFNKAIQSFDQA 658

Query: 623 IVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 682
           I    +N YAA G  + L    QF  +  + ++V+E       ++     IN+ +     
Sbjct: 659 IKYDHNNAYAAQGIAITLVHAKQFSKAMLILSKVRET------IKDVTTLINIGNCLAEL 712

Query: 683 GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL--------RAIHL 734
             +  A+++++  L K        +L  L R   +  + +D   + L        RA+  
Sbjct: 713 KQYHRAIEIFEQVLDKTGETDGYNVLSSLGRVWLQRGR-EDKNPAFLRESLKYTQRALAQ 771

Query: 735 APSNYTLRFDAGVAMQKFSASTLQKTR----RTADEVRSTVAELENAVRVFSHLSAASNL 790
            P+N +L+F+   A  +F  S L +T+    RT  ++   + +L+ A++ F  L  +   
Sbjct: 772 NPTNTSLQFN--TAFVQFQLSELIRTQNENVRTVKDLEYAMEQLDEAIKTFDQLVESKTP 829

Query: 791 HLHGFD-EKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAE 849
                D +++ N           A    R   ER  QQ ++  +A   A L E   R+ E
Sbjct: 830 PFPPADIQQRSNM----------AKNTTRRQLERAIQQQKE-TDALNNARLDEARHRREE 878

Query: 850 EQKKYLLEKRKLED 863
           E+ + L E+  LE+
Sbjct: 879 EKARRLAEQAALEE 892


>gi|409080216|gb|EKM80576.1| hypothetical protein AGABI1DRAFT_126637 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1087

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 232/1057 (21%), Positives = 435/1057 (41%), Gaps = 171/1057 (16%)

Query: 54   IETKQREKEEHFILATQYYNKASRI------DMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
            +  ++R K+ ++  A Q  N A R+       ++E   ++ +G   LA   ++ A  +F 
Sbjct: 118  VMNQERSKDVYYREAAQLLNAAERVGRDTGESVNETLAFLTRGIQQLATRSMDDALRSFD 177

Query: 108  IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             VL     N+ ALLG+A + + R  + D+L  ++  L+ +PSC    R+GIGLC + +  
Sbjct: 178  GVLAVKPTNLVALLGKARILYARRNFKDALRLFQDVLRYNPSCQPDPRIGIGLCFWSMDH 237

Query: 168  LGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEKMQRAFEI 218
              KAR A+QR+L+++P    A + L +  + A++          +    G + ++ AF+ 
Sbjct: 238  KAKARVAWQRSLEINPHEWAAQLLLGLDAINASKNTQLPEAERTSAFISGTKLVENAFKA 297

Query: 219  YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
                A A N L   F   G      +L E  +   +     +  +    R  H++G + +
Sbjct: 298  NQKSAAAANALCEIFLRKGNFKRALKLAERTIQFADTLTIFTEGHLRAGRVCHAEGSHIQ 357

Query: 279  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL- 337
            A  +Y A+  E  K    +    GL Q+QL+  +  +A+   + +L+  P+  ++L+A  
Sbjct: 358  AKRFYSAATSEQPK---HVLGAIGLAQMQLQHDEIPAAIHTLDTLLQP-PNPQKSLEATV 413

Query: 338  -----------GHIYVQLGQIE-KAQELLRKAAKIDPRD------------AQAFIDLGE 373
                       G     LGQ + +A++L  +  K    D            ++A +D  +
Sbjct: 414  MLASLRAHPRPGVSSADLGQEKMRARDLFERVGKSIELDEVRTNGHDTSHASRAILDDMD 473

Query: 374  LLISSD---TGAALD----AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
            + +       G  LD    A K A  + +  G+  P  +LNN+GV+   + ++ SA   +
Sbjct: 474  MHVEIARLWQGENLDRMRKALKEALRISEATGKVDP-RLLNNLGVLQHLESDYASARTMY 532

Query: 427  KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 486
            +DAL     L++          D S +M                          ++L+NL
Sbjct: 533  EDALTTAAHLSM----------DISEAM------------------------STSILYNL 558

Query: 487  ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 546
            AR+ E   D   A   Y  +L ++ +YVDA +R A +    +    + EL+ + L     
Sbjct: 559  ARVYEDQSDVDLAREAYEKLLSRHPEYVDAKIRQAQMYSNVSRHNDAHELIKQCLSSQNS 618

Query: 547  YPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR----NEK 602
              N  +      ++ +    AK+   +     D  D Y+  + G W  +   R    N  
Sbjct: 619  SLNIRAFYTYFLIQTNSIKIAKDFVFSTLKDYDKYDVYSLCAAG-WIQYQQSRESRDNSA 677

Query: 603  RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE----------KGQFDVSKDL 652
               K      +++ E Y + +       +AA G  +V AE               VS D 
Sbjct: 678  DGVKERKRGFQRSAEFYEKALQLDPQCAFAAQGLAIVTAEDALGTLGGALPSTLPVSMDE 737

Query: 653  FTQ-VQEAASG-SVFVQMPD------VWINLAHVYFAQGNFALAMKMYQ-NCLRKFYYNT 703
             ++ V+ A      FV++ +      V+ N+ H Y+A   +  A++  +     KFY   
Sbjct: 738  GSKRVKNAGEALDTFVKVRESKDDGSVYFNMGHCYYACDEYDRAIESVKYETASKFYEGH 797

Query: 704  DAQILLYLARTHYEAEQWQDCKKSLL--------RAIHLAPSNYTLRFDAGVAMQKFSAS 755
            +  +L  L R+ Y ++  +D   S +        +A+H+ P +    ++  +  QK +  
Sbjct: 798  NVSVLQCLCRSWY-SKATKDQSYSAMTTALKYAQKALHIQPGDKATVYNIAMIQQKSAEM 856

Query: 756  --TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDA 813
               L   +RT  +++  +    +A ++F+ L A     L  + +   +   +Y + +L  
Sbjct: 857  LFALPSAKRTLADLQRVIEWASHAQKIFASL-AEVKTQLVPYSKDIADNRRKYGESMLRK 915

Query: 814  AKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEE 873
            A+ H  A  + E + + R EAAR        R++ EE++K    +R+L   Q++LR + E
Sbjct: 916  AEEHLSAQRQHEAETQGRLEAAR--------RKRQEEREKQEAAEREL---QEKLRIEAE 964

Query: 874  HFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEA 933
                 +   R       R  R ++D+++    EKR +K  K R                 
Sbjct: 965  ELTESRRAAREQAMEWTREVRMDSDEEK----EKRPKKARKPRS---------------- 1004

Query: 934  DMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITA 993
                  E P  ++     +         DD  +E+        G   +D DD   P+   
Sbjct: 1005 ------EVPSGDEGEPRKKRRGKLKRSSDDQGDED--------GAVFTDEDDAERPTKKR 1050

Query: 994  ARRRRALSESDDDE---PFERQLRDNTDELQDSDGEL 1027
            A ++R + + DDDE   P ++Q + + + + DSD E+
Sbjct: 1051 ATKKRVIRDDDDDESANPRKKQFK-SKEMISDSDEEM 1086


>gi|262302883|gb|ACY44034.1| SH2 domain binding protein [Armillifer armillatus]
          Length = 173

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 109/173 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL  +  ++PALLG+AC+ FN+  Y  +L  YK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADTQFNFVLNQNSTSIPALLGKACIAFNKKDYRAALALYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL+LDP+ V ALV LAV++L       IR G++ + RA+ I P 
Sbjct: 61  FLKLGNQEKARLAFERALELDPKCVGALVGLAVLELNCRTVESIRNGVQMLSRAYTIDPT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             M LN+LANHFFF      V+ L   A   T +   ++ S Y LAR++H +G
Sbjct: 121 NPMVLNHLANHFFFKKDFEKVKHLALHAFHNTENEAMRAESCYQLARAFHVQG 173



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 6/112 (5%)

Query: 312 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           D+R+AL  ++K L   P+    ++  +GH +++LG  EKA+    +A ++DP+   A + 
Sbjct: 31  DYRAALALYKKALRTNPNCPAAVRLGMGHCFLKLGNQEKARLAFERALELDPKCVGALVG 90

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFE 420
           L  L ++  T   +++ +    +L +A    P    VLN++    F K +FE
Sbjct: 91  LAVLELNCRT---VESIRNGVQMLSRAYTIDPTNPMVLNHLANHFFFKKDFE 139


>gi|426197114|gb|EKV47041.1| hypothetical protein AGABI2DRAFT_117626 [Agaricus bisporus var.
            bisporus H97]
          Length = 1093

 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 234/1062 (22%), Positives = 435/1062 (40%), Gaps = 175/1062 (16%)

Query: 54   IETKQREKEEHFILATQYYNKASRI------DMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
            +  ++R K+ ++  A Q  N A R+       ++E   ++ +G   LA   ++ A  +F 
Sbjct: 118  VMNQERSKDVYYREAAQLLNAAERVGRDTGESVNETLAFLTRGIQQLATRSMDDALRSFD 177

Query: 108  IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             VL     N+ ALLG+A + + R  + D+L  ++  L+ +PSC    R+GIGLC + +  
Sbjct: 178  GVLAVKPTNLVALLGKARILYARRNFKDALRLFQDVLRYNPSCQPDPRIGIGLCFWSMDH 237

Query: 168  LGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEKMQRAFEI 218
              KAR A+QR+L+++P    A + L +  + A++          +    G + ++ AF+ 
Sbjct: 238  KAKARVAWQRSLEINPHEWAAQLLLGLDAINASKNTQLPEAERTSAFISGTKLVENAFKA 297

Query: 219  YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
                A A N L   F   G      +L E  +   +     +  +    R  H++G + +
Sbjct: 298  NQKSAAAANALCEIFLRKGNFKRALKLAERTIQFADTLTIFTEGHLRAGRVCHAEGSHIQ 357

Query: 279  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL- 337
            A  +Y A+  E  K    +    GL Q+QL+  +  +A+   + +L+  P+  ++L+A  
Sbjct: 358  AKRFYSAATSEQPK---HVLGAIGLAQMQLQHDEIPAAIHTLDTLLQP-PNPQKSLEATV 413

Query: 338  -----------GHIYVQLGQIE-KAQELLRKAAKIDPRD------------AQAFIDLGE 373
                       G     LGQ + +A++L  +  K    D            ++A +D  +
Sbjct: 414  MLASLRAHPRPGVSSADLGQEKMRARDLFERVGKSIELDEVRTNGHDTSHASRAILDDMD 473

Query: 374  LLISSD---TGAALD----AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
            + +       G  LD    A K A  + +  G+  P  +LNN+GV+   + ++ SA   +
Sbjct: 474  MHVEIARLWQGENLDRMRKALKEALRISEATGKVDP-RLLNNLGVLQHLESDYASARTMY 532

Query: 427  KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 486
            +DAL     L++          D S +M                          ++L+NL
Sbjct: 533  EDALTTAAHLSM----------DISEAM------------------------STSILYNL 558

Query: 487  ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 546
            AR+ E   D   A   Y  +L ++ +YVDA +R A +    +    + ELV + L     
Sbjct: 559  ARVYEDQSDVDLAREAYEKLLSRHPEYVDAKIRQAQMYSNVSRHNDAHELVKQCLSSQNS 618

Query: 547  YPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR----NEK 602
              N  +      ++ +    AK+   +     D  D Y+  + G W  +   R    N  
Sbjct: 619  SLNIRAFYTYFLIQTNSIKIAKDFVFSTLKDYDKYDVYSLCAAG-WIQYQQSRESRDNSA 677

Query: 603  RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE----------KGQFDVSKDL 652
               K      +++ E Y + +       +AA G  +V AE               VS D 
Sbjct: 678  DGVKERKRGFQRSAEFYEKALQLDPQCAFAAQGLAIVTAEDALGTLGGALPSTLPVSMDE 737

Query: 653  FTQVQEAASGSV--FVQMPD------VWINLAHVYFAQGNFALAMKMYQ-NCLRKFYYNT 703
             ++  + A  ++  FV++ +      V+ N+ H Y+A   +  A++  +     KFY   
Sbjct: 738  GSKRVKNAREALDTFVKVRESKDDGSVYFNMGHCYYACDEYDRAIESVKYETASKFYEGH 797

Query: 704  DAQILLYLARTHYEAEQWQDCKKSLL--------RAIHLAPSNYTLRFDAGVAMQKFSAS 755
            +  +L  L R+ Y ++  +D   S +        +A+H+ P +    ++  +  QK +  
Sbjct: 798  NVSVLQCLCRSWY-SKATKDQSYSAMTTALKYAQKALHIQPGDKATVYNIAMIQQKSAEM 856

Query: 756  --TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDA 813
               L   +RT  +++  +    +A ++F+ L A     L  + +   +   +Y + +L  
Sbjct: 857  LFALPSAKRTLADLQRVIEWASHAQKIFASL-AEVKTQLVPYSKDIADNRRKYGESMLRK 915

Query: 814  AKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEE 873
            A+ H  A  + E + + R EAAR        R++ EE++K    +R+L   Q++LR + E
Sbjct: 916  AEEHLSAQRQHEAETQGRLEAAR--------RKRQEEREKQEAAEREL---QEKLRIEAE 964

Query: 874  HFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEA 933
                 +   R       R  R ++D+++    EKR +K  K R                 
Sbjct: 965  ELTESRRAAREQAMEWTREVRMDSDEEK----EKRPKKARKPRS---------------- 1004

Query: 934  DMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITA 993
                  E P  ++     +         DD  +E+        G   +D DD   P+   
Sbjct: 1005 ------EVPSGDEGEPRKKRRGKLKRSSDDQGDED--------GAVFTDEDDAERPTKKR 1050

Query: 994  ARRRRALSESDDDE---PFERQLRDNTDE-----LQDSDGEL 1027
            A ++R + + DDDE   P ++QL    D      + DSD E+
Sbjct: 1051 ATKKRVIRDDDDDESANPRKKQLTKVDDSKSKEMISDSDEEM 1092


>gi|392569622|gb|EIW62795.1| RNA polymerase II-associated protein [Trametes versicolor FP-101664
            SS1]
          Length = 1098

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 218/1008 (21%), Positives = 415/1008 (41%), Gaps = 150/1008 (14%)

Query: 4    EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
            E   Q  VE  +      S P +  + A++   R +    L +       I+ K R+  E
Sbjct: 71   EKIAQTAVETLQATGATASLPPVYSFLANLHIARASKAPKLKLPNARQDVIKEKIRD--E 128

Query: 64   HFILATQYYNKASRI--DMHEPSTWVG---KGQLLLAKGEVEQASSAFKIVLEADRDNVP 118
            +   A + +N   R+  +  +  T +    +G L L+ G  + A+  F  VL     NV 
Sbjct: 129  YNRDAAKVFNDGERVASENGQSGTMLAILTRGILQLSTGVWDDAARTFDAVLAEKPTNVV 188

Query: 119  ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
            ALLG+A + + R +YS +L+ +++ LQ++P+C    R+GIGLC + +    KA+ A+QR+
Sbjct: 189  ALLGKAKIAYARRQYSQALKLFQKVLQLNPNCHPDPRIGIGLCLWAMDHKAKAKSAWQRS 248

Query: 179  LQLDPENVEA--LVALAVMDLQANEAAG-------IRKGMEKMQRAFEIYPYCAMALNYL 229
            + ++P    A  L+ +  ++   +EA           +G   +++AF      + A N L
Sbjct: 249  IDVNPGEWSAQLLLGIEALNTSKDEAQSEEDRREEFLRGTRLIEKAFNANQKNSAAANAL 308

Query: 230  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
               F   GQ     +L E  +   +        Y    R  H +     A + +    KE
Sbjct: 309  CELFLQKGQTKRALKLAERTIQFADVKGIVCDGYIRAGRICHKEASIRDA-MTHFQKAKE 367

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--YPDNCETLKALGHIYV----- 342
              K +  +    GL Q+Q+K  +  +A+   +  ++    P + E +  L  +       
Sbjct: 368  TKKDN--VLATIGLAQLQVKNEEPAAAIHTLDTFMQTPANPKSVELMAMLASLRAMPRPG 425

Query: 343  -----QLGQIEKAQELLRKAAK--IDPRDA----------------------QAFIDLGE 373
                 ++ + ++A+EL  + +K    P D                       + FI++ +
Sbjct: 426  VSSADKVEEKKRARELFDRVSKAITTPADGLPHANGHTQPPSSSVRKLGDDFEMFIEIAK 485

Query: 374  LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 433
            L           A+K A    + +G+  P  ++NN+G +   +G  + A   ++ AL   
Sbjct: 486  LYQDESHEKMTLAYKQALKNSEVSGKTEP-RLVNNLGALQHLEGHLDEAQTLYETALTQA 544

Query: 434  IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 493
                 LDS T   +                                 ++L+NLAR+ E  
Sbjct: 545  AG---LDSTTAEAM-------------------------------STSILYNLARVYEDQ 570

Query: 494  HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 553
             + + A   Y  +L ++ +YVDA +R A +    N    + EL+ + L       N  + 
Sbjct: 571  GEEMKAKEAYEKLLTRHPEYVDAKIRQAQMLAGLNRHNDAHELLKQVLSSQANNLNLRAF 630

Query: 554  LGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK-----LE 608
                 ++++    AK+         D  D Y+  + G   Y  A  N    PK       
Sbjct: 631  YTHFLIQSNLPKPAKDFVFLTLRDHDKHDVYSLCAAGWLQYHQARENRDGTPKGIEDRKR 690

Query: 609  ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK------------------ 650
            A H  ++ E Y + +        AA G  +V+AE    ++                    
Sbjct: 691  AFH--RSAEFYEKALHLDPLCAIAAQGLAIVVAEDALGNLGGALGTIAPDEAQKRLKNSR 748

Query: 651  ---DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 706
               D+F +V+E+ + GSV+        N+ H Y+A+  F  A++ Y+   ++FY N +  
Sbjct: 749  EALDIFAKVRESINDGSVYA-------NMGHCYYARDEFDRAIESYETASKRFYSNQNVP 801

Query: 707  ILLYLARTHYEAEQWQDCKKSLL--------RAIHLAPSNYTLRFDAGVAMQKFSA--ST 756
            +LL L R  Y A+  +D   + +        +A+HL P +    ++  +  QK +    +
Sbjct: 802  VLLCLCRAWY-AKANKDQSFTAMNTALQYAQKALHLHPWDKATLYNIAMIQQKAAELLMS 860

Query: 757  LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKI 816
            +  ++R+  +++  + +  +  ++F+ L+A  +  +  +     +   +Y + +L   + 
Sbjct: 861  VPASKRSLKDMQKAIEQATHGQKLFASLAADKSPQV-PYSRDIADQRRKYGESMLRRCEE 919

Query: 817  HREAAEREEQQNRQRQEAARQAALAEEARRKA---EEQKKYLLEKRKLEDEQKRLRQQEE 873
            H     + E   + + EAARQ   AE+ R  A   E Q++   +  KL +E++  R+Q  
Sbjct: 920  HLATQRQWEADAQAKIEAARQRRQAEKERLDAAERERQEELRKQAEKLAEERRIAREQAL 979

Query: 874  HFQR-VK-----EQWRSSTPASKRRERSEN---DDDEVGHSEKRRRKG 912
             + R VK     E+    T  +KR +RSEN   D+   G  ++++R+G
Sbjct: 980  EWTREVKRMESDEEREKQTKKAKRGKRSENVSGDEGAAGEPKQKKRRG 1027


>gi|262302905|gb|ACY44045.1| SH2 domain binding protein [Craterostigmus tasmanianus]
          Length = 178

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 112/178 (62%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPRCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KL +  KAR AF+RALQ+D + V ALV LAV++L       IR G++ + RA+ I   
Sbjct: 61  FIKLAKQDKARLAFERALQMDIQCVGALVGLAVLELNNKTPESIRNGVQMLSRAYAIDAT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAFHNTENEAMRAESCYQLARAFHVQEDYDQA 178


>gi|322707096|gb|EFY98675.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Metarhizium anisopliae ARSEF 23]
          Length = 1178

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 253/1014 (24%), Positives = 412/1014 (40%), Gaps = 204/1014 (20%)

Query: 56   TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS------------ 103
            ++ + KE +  LAT   N A+R++   P  ++ +G LLL +  ++  S            
Sbjct: 138  SEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKNE 197

Query: 104  ---SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IR 155
               +A K   +A R     N+ AL+G+A   F+  +Y D+L  Y+  L   P       R
Sbjct: 198  LLKTAVKSFDDALRVSQGKNMLALMGKARAYFSMHKYPDALATYQDVLHKMPDLVDPDPR 257

Query: 156  LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------R 206
            +GIG C ++LG    A+ A++R+L+++P++  A + L +  L A+    +         R
Sbjct: 258  IGIGCCFWQLGFKEDAKVAWERSLEINPDSKIANILLGLFYLDASGHVPVNSDDFLKLYR 317

Query: 207  KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
            K M E  Q++F++     +  +  A +F         ++L   A+  T+     S  +Y 
Sbjct: 318  KAMTEYTQKSFKLDKEVPITCSTFAGYFLSRKAWENADKLAHKAIQYTDVNAIASDGWYL 377

Query: 266  LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVL 324
            LAR  H   D EKA  YY  +            P  +G+ Q+ +   D   A    EK++
Sbjct: 378  LARKAHYNDDAEKASDYYRRADDARGGADTGYLPAKFGVAQLSVLKNDLGEAKLRLEKMI 437

Query: 325  EIYPDNCETLKALGHIYVQ---LGQ-----------IEKAQELL---RKAAKIDPR---- 363
            +    N E +  LG +Y +    GQ           ++KA  LL   R A K DP+    
Sbjct: 438  Q-QSKNHEAMILLGTLYAEEIFAGQKSDSKEDKSAEMKKAITLLESVRNAWK-DPKRTIA 495

Query: 364  -DAQAFIDLGELLISSDTGAALDAFKTARTLL--------------KKAGEEV------P 402
             DA   ++L  L        AL   +    L                +A  +V      P
Sbjct: 496  PDASVLLNLARLYELDQPEKALQCLQQVEQLELDQIPKSERPTDAENEAAAQVEMRKFLP 555

Query: 403  IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
             ++LNNIG  H +  + E A + F+ AL   + +   +    T  + +S S         
Sbjct: 556  PQLLNNIGCFHSQAEKHELASEMFEAALSACMRIGEKEPGMDTDALVSSIS--------- 606

Query: 463  FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                                 FNL R  E    T  A  +Y  +L ++ DY DA  RLA 
Sbjct: 607  ---------------------FNLGRSYESRGLTDKAMEVYEGLLARHDDYTDARTRLAY 645

Query: 523  IAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETFRAA 574
            I K R N              N + P+A++ L      DLE++    W   K     R A
Sbjct: 646  I-KLRKN-------------PNKEGPDAVAKLYQENTSDLEVRALYGWYLGKVHSRKRPA 691

Query: 575  SDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKE 617
            +   D +              D YA + +GN     A  +R E  + K + + +  KA E
Sbjct: 692  NIVEDPEFRHYKHTLQNYDKHDRYALIGMGNLYLLQAREMRRETESDKQKRSVIYGKAVE 751

Query: 618  LYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 676
             + + +     N YAA G  + L E K  +  +  +F +V+E       V+ P V++NL 
Sbjct: 752  FFEKALSLDPKNAYAAQGVAIALVEDKKDYKSALTIFNKVRET------VREPHVYVNLG 805

Query: 677  HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLL 729
            HV+     ++ A++ Y+  L K     D  IL  L RT         + + +    +   
Sbjct: 806  HVFAELRQYSKAIENYEIALTKDGKANDPVILSCLGRTWLNRGRSERDIDAYGKALECAQ 865

Query: 730  RAIHLAPSNYTLRFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSAA 787
            +A+ +AP     +F+ A V +Q  +    L + RRTA+++ +  A LE+A+     L A 
Sbjct: 866  QALEVAPDQVHYKFNVAFVQIQLVTTIQNLPENRRTAEQLETAAAGLESAI---ESLDAI 922

Query: 788  SNLHLHGFDEKKINTHVEYCKHLL----------------------DAAKIHREA--AER 823
            + L    + +  I       ++ L                       AAK  REA    R
Sbjct: 923  ATLPQTPYPKHDIEQRANMARNTLRKQLERAIAKQKEWEEKNKEKIQAAKEQREAELKRR 982

Query: 824  EEQ------QNRQRQE---------AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRL 868
            EEQ      + R+RQE         A R  ALAE+  R  EE++K  LE     +  +++
Sbjct: 983  EEQRQEILEKERERQEKIRKEREAIAIRDRALAEQ--RAEEERQKQELEMTTDAETGEKV 1040

Query: 869  RQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSS 922
            +++ +   R  E     TP  K+  R E+D +E  H++KRRR   K   K KS+
Sbjct: 1041 KRKSKAAGRTGEGRPKKTPKKKKAARDEDDSEEESHTKKRRRLTKKESSKFKSA 1094


>gi|389638942|ref|XP_003717104.1| tetratricopeptide repeat protein 1 [Magnaporthe oryzae 70-15]
 gi|351642923|gb|EHA50785.1| tetratricopeptide repeat protein 1 [Magnaporthe oryzae 70-15]
 gi|440473075|gb|ELQ41897.1| tetratricopeptide repeat protein 1 [Magnaporthe oryzae Y34]
 gi|440478300|gb|ELQ59142.1| tetratricopeptide repeat protein 1 [Magnaporthe oryzae P131]
          Length = 1221

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 218/875 (24%), Positives = 354/875 (40%), Gaps = 180/875 (20%)

Query: 36  ERIAILNALGVYYTYL----------GKIETKQREKEEHFILATQYYNKASRIDMHEPST 85
           E++ I++ L   Y +           G + ++ + KE +  LA   +N+ASRI+   P  
Sbjct: 104 EKLGIVSCLCWMYLWKSREAPRVAPEGALASEVKTKEHYLQLANTTFNEASRINPAFPPL 163

Query: 86  WVGKGQLLLAK------------GEVEQA-----SSAFKIVLEADR----DNVPALLGQA 124
           ++ KG L L +            G V+ A      SA K   +A R     N+ AL+G++
Sbjct: 164 FLAKGVLYLLRASLQTSVKSGQVGSVDAAKAGLLGSALKSFEDALRVSQGKNMLALMGKS 223

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
             +F+ G+Y+++L  Y+  L   P       RLGIG C ++LG    A+ A++R L+++P
Sbjct: 224 RAQFSLGKYAEALAGYQDVLHRMPEMVDPDPRLGIGCCFWQLGHKDDAKAAWERCLEINP 283

Query: 184 ENVEA--LVALAVMD----LQANEAAGIR---KGM-EKMQRAFEIYPYCAMALNYLANHF 233
           E+  A  LV L  +D    +  N    IR   K M E  Q++F++     +     A +F
Sbjct: 284 ESKIANILVGLYYLDQSGQVPTNSPEFIRLYKKAMTEYTQKSFKLSKDLPLTCATFAGYF 343

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
                   V+ L   A+  T+     S  +Y LAR  H +GD EKA  YY  S       
Sbjct: 344 LSRKSFANVDSLAHKAIQYTDVNAIASDGWYLLARKEHYQGDTEKASDYYRRSDDARGGT 403

Query: 294 HEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--------- 343
                P  +G+ Q+ +   D+  A    EK+++    N E +  LG +Y +         
Sbjct: 404 DRGYLPAKFGVAQLSVVKEDYGEAKLRLEKMIQ-QSRNYEAMILLGTLYAEEVFATQYAN 462

Query: 344 -----LGQIEKAQELL---RKAAK-----IDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
                  +I+KA  LL   R A K     + P DA   ++L  L  +     AL   +  
Sbjct: 463 VKEDKSAEIKKAISLLEGVRTAWKDTKKNLSP-DAAVLLNLARLYETEHPDKALQCLQQV 521

Query: 391 RTL-------------------LKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             L                   LK A  + +P ++LNNIG  H +    E+A   F+ AL
Sbjct: 522 EQLEIELISDSDRPQGIEDEAQLKAAVRKLLPPQLLNNIGCFHAQHERHEAASDMFEAAL 581

Query: 431 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
           G                    A M          R +   + ++      T+ FNL R  
Sbjct: 582 G--------------------ACM----------RIQESDDQMDTDALVTTISFNLGRSY 611

Query: 491 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
           E       A  +Y  +L ++ DY DA +RLA I K R N Q              + P+A
Sbjct: 612 ESRGLWDQAIEVYEGLLKRHDDYTDAKIRLAYI-KLRRNPQ-------------KEGPDA 657

Query: 551 LSML-----GDLELKN-DDWV--KAKETFRAASDATDGK--------------DSYATLS 588
           ++ L      DLE++    W   K     R A+ A D +              D YA + 
Sbjct: 658 VAKLYQGNPADLEVRALYGWYLGKVHSRKRPANIAEDPELRHYKHTLQHYDKHDCYALVG 717

Query: 589 LGNWNYFAALRNEKR-----APKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 643
           +GN  Y  + R  +R       +  AT+  +A E + + +     N YAA G  + L E 
Sbjct: 718 MGNL-YLMSAREMRRETDQDKSRRSATY-SRAVEFFEKALQLDPRNAYAAQGIAIALVED 775

Query: 644 GQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT 703
                 KD  + +Q   S    ++   V +NL H++     F  A++ Y+  L K     
Sbjct: 776 -----RKDHKSALQVFLSVRDTIKDAQVLVNLGHIFAELKQFTKAIENYEAALAKEGKAN 830

Query: 704 DAQILLYLARTHYEAEQWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS 753
           D  IL  L RT     + +          DC K   +A+++AP     +F+      + +
Sbjct: 831 DPSILACLGRTWLNKGRAERDLEAYMKALDCAK---KALNVAPEQVHFKFNVAFVQIQLA 887

Query: 754 AST--LQKTRRTADEVRSTVAELENAVRVFSHLSA 786
            +   L +T+R+ ++++     LE+A+     L+A
Sbjct: 888 TTIYGLSETQRSLEQLQDAATGLESAIAALDELAA 922


>gi|262302887|gb|ACY44036.1| SH2 domain binding protein [Acheta domesticus]
          Length = 173

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 109/173 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RALQLD + V ALV LA++ L   +   IR G++ + +A+ I   
Sbjct: 61  FMKLGNQDKARLAFERALQLDNQCVGALVGLAILKLNQQQPESIRTGVQMLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +G
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLAMHAFHNTENDAMRAESCYQLARAFHVQG 173


>gi|134084006|emb|CAK43077.1| unnamed protein product [Aspergillus niger]
          Length = 1199

 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 242/970 (24%), Positives = 403/970 (41%), Gaps = 169/970 (17%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ T+ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 134  GELYTEAKTKDHYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVD 193

Query: 99   ----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   PS 
Sbjct: 194  TSERVESLRQALKCFDESSKAFGGRNVMAILGRARTQYLLGRYAEALEGYQKVLMKMPSL 253

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A
Sbjct: 254  TDPDPRIGIGSCLWQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPA 313

Query: 203  AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G   +  M +  Q+AF+I     M  +    +F     +  VE L   A+  T+     
Sbjct: 314  FGSLYKVAMTQYTQKAFKIDKEYPMTCSLFGGYFLLRKAYSTVETLARKAIEHTDVMQIA 373

Query: 260  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
            S  +Y L R  H +GD  +A  YY  S +      +   P  +G  Q+Q+   DF  A  
Sbjct: 374  SDGWYLLGRKSHYEGDLTRAAEYYNRSDQARGGGEKGYLPAKFGTVQMQVSNKDFDGAKF 433

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--------K 356
              EK+++    N E +  LG ++ +                +I+KA  LL         +
Sbjct: 434  RLEKIIQ-QTKNAECMVLLGALHAEEVFAAQRSGSKEDKSVEIKKAINLLESVRALWKDE 492

Query: 357  AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL----LKKAGE-EVPIEVLNNIGV 411
              KI P D    + L  L   S    ++        +    +K A    +P ++LNN+G 
Sbjct: 493  TKKISP-DESVLVYLARLYEQSAPEKSMQCLTQLEEMQLAEVKAALRVHLPPQLLNNMGC 551

Query: 412  IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
              ++  + E A   F+ AL        + SK K   +D  A +                 
Sbjct: 552  FLYQAEKIERARTMFQAALD-----ACVRSKEKESELDTDALV----------------- 589

Query: 472  HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
                     T+ FNL R  E       A  +Y+ +L ++ DY +A  RL  IA       
Sbjct: 590  --------TTISFNLGRTYEAADMPEEAKKVYQGLLERHADYTEANARLTYIA------- 634

Query: 532  LSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK--------- 581
            L     +E  K   K   A S   +LE++    W  +K   RAA+ A D +         
Sbjct: 635  LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANLAEDHEQRHYKHTLQ 692

Query: 582  -----DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAA 633
                 D Y+   +GN +   A  +R +    K +   + E+A E + + +     N YAA
Sbjct: 693  YYDKHDRYSLTGMGNIHLSTARDMRRDSDQDKEKRRKMYERAVEFFDKALQLDPRNAYAA 752

Query: 634  NGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 692
             G  + L + K     +  +F+++++       ++   V++NL HVY     +  +++ Y
Sbjct: 753  QGIAIALVDDKKDHASAVHIFSKIRDT------LRDASVYLNLGHVYAELRQYTRSIEHY 806

Query: 693  QNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSL---LRAIHLAPSNYTLRFDA 745
            +  L K     DAQIL  L R       +    Q  K +L    RA  +AP    L F+ 
Sbjct: 807  EAALSKDRAR-DAQILACLGRVWLAKGKQEMNLQAMKTALDYAQRAHSVAPGQVHLEFNV 865

Query: 746  GVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASNL-HLHGFDEKKINT 802
                 + ++ T  L +T++T  +V+     L+ AV  F+ ++ A N  +     E++ N 
Sbjct: 866  AFVQNQIASLTYGLPETQKTVQDVQDAAEGLQQAVETFNRVAQAKNPPYPSSALEQRANM 925

Query: 803  HVEYCKHL------------LDAAKIHREAAEREEQQNRQRQEAARQAALAEEAR--RKA 848
                 K L             +AAK+  +A E  E + RQR+E  R+A  AE  R  R A
Sbjct: 926  GRTILKQLERALQSQKEYEEKNAAKLQ-QAREAREAEKRQREEEVRKAQEAERERKQRVA 984

Query: 849  EEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKR 908
            EE+++ + E ++L +++    +  E  +   E   S T A  +R              K+
Sbjct: 985  EERQRMIEEAQRLAEQRAEEERAREEAELTTE---SETGAKVKR--------------KK 1027

Query: 909  RRKGGKRRKK 918
            R    KR+KK
Sbjct: 1028 RTTSTKRKKK 1037


>gi|440639555|gb|ELR09474.1| hypothetical protein GMDG_00656 [Geomyces destructans 20631-21]
          Length = 1257

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 226/965 (23%), Positives = 399/965 (41%), Gaps = 180/965 (18%)

Query: 36   ERIAILNALGVYYTYL----------GKIETKQREKEEHFILATQYYNKASRIDMHEPST 85
            E++++L  L   Y +           G++ ++ + KE +  L+T   N A+RI+   P  
Sbjct: 118  EKLSMLTCLCWLYLWKSREAPRVAPEGQMVSEAKTKEFYLQLSTTALNDATRINPSFPPL 177

Query: 86   WVGKGQLLLAKGEVEQASSA-------------FKIVLEADRD--------NVPALLGQA 124
            ++ +G L L +  ++  S A              +  L++  D        N+ A+LG+ 
Sbjct: 178  FMARGVLYLLRASLQPPSKAPAAGTIDPEKLDILRHALKSFDDAIRVSQGRNMLAVLGKC 237

Query: 125  CVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
             V+F+ G+Y+++LE Y+ AL   P       R+GIG C + LG  G A+ A++RAL+++ 
Sbjct: 238  RVQFSLGKYAEALEGYQLALSRMPELTDPDPRIGIGACLWMLGHKGDAKVAWERALEVNE 297

Query: 184  ENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN--------YLANHF 233
             +  A  L+ L  +D   +     +  +E  ++A  +Y   A  L+          A +F
Sbjct: 298  NSKIANILLGLYHLDASGHVPTNSKDFIETYKKAMTVYTQKAFKLDKDLPLTCSTFAGYF 357

Query: 234  FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
                     + L   A+  T+     S  +Y LAR  H + + ++A  YY  S +     
Sbjct: 358  LSRKSLANTDALAHKAIQYTDVNAIASDGWYLLARKEHYEDNVDRAADYYRRSDEARGGA 417

Query: 294  HEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------QLG- 345
                 P  +G  Q+ +   DF  A    EK+++ +  N E +  LG IY       Q G 
Sbjct: 418  DRGYVPAKFGSAQISVLKSDFGEAKFRLEKIVQ-HSKNVEAMSLLGTIYSEEVFANQYGA 476

Query: 346  -------QIEKAQELLR--KAAKIDPR-----DAQAFIDLG------------------- 372
                   + +KA  LL   +AA  DP+     DA   ++L                    
Sbjct: 477  SNEDKTQEFKKAVSLLESVRAAWKDPKKNLIPDASVLLNLARLYEVDNPEKSVLCLQQIE 536

Query: 373  --ELLISSDTGAALDAFKTART-----LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
              EL  +     ALD  K   T     +  K  E +P ++LNN+G  H++  +F+ +   
Sbjct: 537  QIELAQAQAQAQALDEDKATDTEAEEAMKLKIRENLPPQLLNNMGCFHYQAEKFDLSRDF 596

Query: 426  FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
            F+ AL        + +  +   +D  A +                          ++ FN
Sbjct: 597  FQAALS-----ACVKAGEREEAMDTDALV-------------------------TSISFN 626

Query: 486  LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
            L R  E       A  +Y  +L ++ DY DA  RLA IA       L     +E  +  G
Sbjct: 627  LGRTYEASGMFDEAKTVYEGLLGRHADYTDARTRLAYIA-------LKESPTDEGPRAIG 679

Query: 546  K-YPNALSMLGDLELKN-DDWVKAKETFRAASDAT------------------DGKDSYA 585
            K Y +A +   DLE++    W   +   R  + A+                  D  D YA
Sbjct: 680  KLYQDASN---DLEVRALYGWYLGRVHSRKRASASHIHEDPELRHYKHTLQHHDKHDRYA 736

Query: 586  TLSLGNWNYFAALRNEKRAPKLE----ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 641
             + +GN  Y    R   R    E    ++   KA E + + +     + +AA G  + + 
Sbjct: 737  LIGMGNL-YLQTAREMPRNSDSERAKRSSMYSKAAEFFEKALQLDPKSAFAAQGIAIAMI 795

Query: 642  E-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFY 700
            E K  F  +  +F QV+E       V+ P+V+INL H++     ++ A++ Y+  L K  
Sbjct: 796  EDKKDFKGALSIFMQVRET------VKDPNVYINLGHLFAELRQYSKAIEHYEAALSK-N 848

Query: 701  YNTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS 753
              +DAQIL  L RT         + + +++  +   +A+  AP     +F+      + +
Sbjct: 849  SGSDAQILACLGRTWLARGRAEKDLKSYKNALEYAQKALETAPEQIHFKFNVAFVQIQLA 908

Query: 754  AS--TLQKTRRTADEVRSTVAELENAVRVFSHLSA-ASNLHLHGFDEKKINTHVEYCKHL 810
             +  T  ++ RT  EV +  A LE+A+     ++      +     E + N      +  
Sbjct: 909  QTIYTTAESARTLAEVEAAAAGLEDAIVSLEEIAQHPQTPYPKALVEGRANMARNTMRKQ 968

Query: 811  LD-AAKIHREAAEREEQQNRQRQEAARQAALA--EEARRKAEEQKKYLLEKRKLEDEQKR 867
            L+ + +  RE  E+ +++ R+  E  RQ  L   EEAR KAEE+++    KR + +E+ +
Sbjct: 969  LERSIQSQREYEEKNKEKVREAME-VRQRELKEREEARLKAEEEQRE--RKRVIAEERAK 1025

Query: 868  LRQQE 872
            + + +
Sbjct: 1026 IAEHD 1030


>gi|262302891|gb|ACY44038.1| SH2 domain binding protein [Abacion magnum]
          Length = 173

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 109/170 (64%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDHRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG+L KAR AF+RALQLD + V ALV +AV++L       IR G++ + RA+ I   
Sbjct: 61  FLKLGKLDKARLAFERALQLDSQCVGALVGIAVLELNNKTTDSIRNGVQMLSRAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y +AR++H
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLAIHAFQNTENEAMRAESCYQMARAFH 170


>gi|262302949|gb|ACY44067.1| SH2 domain binding protein [Nicoletia meinerti]
          Length = 176

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 109/174 (62%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           F  VL    +N+ +LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL
Sbjct: 3   FNFVLNQSPNNIASLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKL 62

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G   KAR AF+RALQLD   V ALV L+++ L   +   IR G++ +  A+ I     M 
Sbjct: 63  GNQEKARLAFERALQLDAHCVGALVGLSILKLNQQQPESIRTGVQMLSMAYTIDSTNPMV 122

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 123 LNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYMLARAFHVQGDYDQA 176


>gi|310789513|gb|EFQ25046.1| tetratricopeptide [Glomerella graminicola M1.001]
          Length = 1201

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 260/1111 (23%), Positives = 445/1111 (40%), Gaps = 218/1111 (19%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
            Y KQ K++   ++L  G +   D    +   E+++++  L   Y +           G++
Sbjct: 79   YAKQKKIDHAIEMLVRGGNAMRD----NNPREKLSMIGCLCWMYLWKSREAPRVPPDGEL 134

Query: 55   ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKG--QLLLAKGEVEQAS--------- 103
             ++ + KE +  LAT   N ASRI+   P  ++ +G  QLL A  +  +A+         
Sbjct: 135  ASEAKTKEYYLQLATSTLNDASRINPAFPPLFLARGVLQLLRASLQTPKATGHGQVDSEK 194

Query: 104  -----SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGA 153
                 SA K   +A R     N+ A++G+A   F+ G+Y +SL  Y+  LQ  P      
Sbjct: 195  ADLLRSALKAFEDAVRVSQGKNMLAVMGKARTFFSLGKYPESLACYQEVLQKMPDFVDPD 254

Query: 154  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR- 206
             R+GIG C ++LG    A+ A++R L+++P++    + L +  L A      N    +R 
Sbjct: 255  PRIGIGCCFWQLGFKDDAKLAWERCLEINPDHKVGNILLGLYYLDASGHIPTNSPDFLRL 314

Query: 207  --KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
              K M E  Q++F++     +     A +F    Q   V+ L   A+  T+     S  +
Sbjct: 315  YKKAMTEYTQKSFKLDKNMPLTCATFAGYFLSRKQLSTVDSLAHKAIQYTDVNAIASDGW 374

Query: 264  YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEK 322
            Y LAR  H  GD ++A  +Y  + +          P  +G  Q+ +  GD   A    EK
Sbjct: 375  YLLARKEHYTGDPDRASDFYRRADEARGGAERGYLPAKFGAAQLAVLRGDLGEAKLRLEK 434

Query: 323  VLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAK-----I 360
            +++    N E +  LG +Y +                +++KA  LL   R A K     +
Sbjct: 435  MIQ-QSKNHEAMILLGTLYAEEVFANEEADGKEDKSAEMKKAISLLESVRGAWKDSKKGM 493

Query: 361  DPRDAQAFIDLGEL-----------------------LISSDTGAALDAFKTARTLLKKA 397
             P DA   ++L  L                       +   D  A +      R  L+K 
Sbjct: 494  SP-DAAVLLNLARLYEHEYPERAQQCLLQVEQLELDQIPEDDHPADITDEAEKRAALRKF 552

Query: 398  GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
               +P ++LNNIG  + +  + E A + F+ ALG  + +   D +     ID  A +   
Sbjct: 553  ---LPPQLLNNIGCFYSQSEKHEQASEMFEAALGACMKIGEKDQE-----IDTDALV--- 601

Query: 458  KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
                                   T+ FNL R  E       AS +Y  +L ++ DY DA 
Sbjct: 602  ----------------------TTISFNLGRSYESQGLYDKASEVYEGLLKRHDDYTDAR 639

Query: 518  LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAK--- 568
             RLA I K R N              N + P+A+S L      DLE++    W   K   
Sbjct: 640  TRLAYI-KLRKN-------------PNKEGPDAVSKLYQENPQDLEVRALYGWYMGKVHS 685

Query: 569  -------------ETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHL 612
                           ++      D  D YA + +GN     A  +R E  + K + +   
Sbjct: 686  RKRPQNINEDHEFRHYKHTLQNYDKHDRYALVGMGNLYLIQAREMRRESDSDKAKRSATY 745

Query: 613  EKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDV 671
             KA E + + +     N YAA G  + L E K  +  +  +F ++++       ++   V
Sbjct: 746  SKAVEFFEKALSLDPKNAYAAQGIAIALVEDKKDYKTALSIFVKIRDT------IKEAHV 799

Query: 672  WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA-------EQWQDC 724
            ++NL H+Y     ++ A++ Y+  L K     D  IL  L RT           + + + 
Sbjct: 800  YVNLGHIYAELRQYSKAIENYEVALSKEGKANDPVILACLGRTWLNKGRSEKLLDAYHEA 859

Query: 725  KKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFS 782
             K   +A+  AP     +F+      + + +   L + +RT  +++     LE+A+    
Sbjct: 860  LKYAQKALEAAPEQVHYKFNVAFVQIQMATTVYGLNENQRTLAQLQEAATGLESAI---- 915

Query: 783  HLSAASNLHLHGFDEKKINTHVEYCKHLLD-----AAKIHREAAER---EEQQNRQRQEA 834
                         DE   +    Y KH ++     A    R+  ER    +++  ++ + 
Sbjct: 916  ----------SALDEIANHPQTPYPKHDVEQRANMARNTQRKQLERAIASQKEYEEKNKE 965

Query: 835  ARQAALAE---EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKR 891
              QAAL +   E R++ EE++K L ++R  E ++K  R++EE   R +E         K 
Sbjct: 966  KLQAALEQRQIELRKREEERQKALEKER--ERQEKIRREREEIAARDREIAERRAEEEKA 1023

Query: 892  RERSE-NDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREE-PEDEDASM 949
            R+ +E   D E G   KR++K   R   +   +     + A+ D  D  EE P  +   +
Sbjct: 1024 RQEAEMTTDSETGDKVKRKKKSAPRGDGESRPKRGSRKKKADTDAEDSAEERPTKKKRRL 1083

Query: 950  NYREPIGQ--------MNDQDDDVEENANDR 972
              +EP           + D D   +E+  DR
Sbjct: 1084 TKKEPTANSKYKSAEIIVDSDSGSDEDPLDR 1114


>gi|407923080|gb|EKG16168.1| Tetratricopeptide TPR-1 [Macrophomina phaseolina MS6]
          Length = 1217

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 239/1015 (23%), Positives = 405/1015 (39%), Gaps = 195/1015 (19%)

Query: 59   REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VE 100
            + KE+    AT   N ASRI       ++ +G L L +                    + 
Sbjct: 140  KTKEQWIQAATANLNDASRISPSYAPLFLARGVLYLLRASAITPTKSGAPDSAERTDALR 199

Query: 101  QASSAFKIVLEA-DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGI 158
            QA+  F   L A    N+ A+LG+A V+++ G+Y+DSL+ Y++ L+  P       R+GI
Sbjct: 200  QAAKCFDDSLRAYQGKNLMAILGKARVQYSLGKYADSLQCYQKVLEKAPDMVDPDPRIGI 259

Query: 159  GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN--------EAAGI-RKGM 209
            G C ++LG    A+ A+QRAL L P++  A + L +  L  +        E A I +K M
Sbjct: 260  GCCLWQLGHKDDAKNAWQRALDLCPDSKTANILLGLYHLNVSSQFPTTSPEFAPIYKKAM 319

Query: 210  EK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
             +  Q+AF++     +       +F        VE+L+  A+  T+        +Y L R
Sbjct: 320  TQYTQKAFKLDDKYPLTCATFGGYFLMRKAMAQVERLSRRAIDFTDVNAVAGDGWYLLGR 379

Query: 269  SYHSKGDYEKAGLYYM-ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
              H + +  KA  YY  A      +   ++   +G+ Q+++ + DF  A    EK+++  
Sbjct: 380  KEHYENEISKALEYYQRADTARGGEDRGYLPAKFGMAQIRIMMQDFEGAKLRLEKIIQ-Q 438

Query: 328  PDNCETLKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR-----DAQ 366
              + E +  LG +Y +                +++KA  LL   ++A  DP+     D+ 
Sbjct: 439  SKSIEAMTLLGTLYAEDVFTAQASNMKEDKSNELKKAISLLEGVRSAWKDPKRKASPDSA 498

Query: 367  AFIDLGELL-------------------------------------ISSDTGAALDAFKT 389
              ++L  L                                         +  AA + ++ 
Sbjct: 499  VLLNLARLYEVDHPEKSLQCLHQVEQMELDEIPEEDRPDEPQAPDPKQENYDAAKEVYEE 558

Query: 390  A-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI 448
            A R  L    E +P ++LNN+G  ++++ ++  A + F+ AL   + +   D    T  +
Sbjct: 559  AKRAHLNALRENLPPQLLNNMGCFYYQQEKYAQARELFQSALNACVKVGDKDQSVDTDAL 618

Query: 449  DASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 508
                                            T+ ++LAR  E       A  +Y  +L 
Sbjct: 619  ------------------------------VTTISYSLARTYEAEGMLDEAKKVYEGLLQ 648

Query: 509  KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD----- 563
            ++ DYVDA +RL  I K R + Q             G  P A+S L   E  N +     
Sbjct: 649  RHSDYVDANVRLTYI-KLRQSPQ-------------GDGPKAMSELYKAESSNLEVRALY 694

Query: 564  -WVKAKETFRAAS--------------DATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 608
             W   K   R ++                 D  D Y+   +GN  Y    R  +R  + +
Sbjct: 695  GWYLNKSKMRTSNVNEDQEQRHYKHTLQQYDKHDRYSLTGMGNI-YLTIAREMRRDTEQD 753

Query: 609  ATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ-FDVSKDLFTQVQEAASGS 663
                    ++A E + + +     N YAA G  +   E  + F  +  LFT+V+E     
Sbjct: 754  KEKRRKMYQRAVEFFDKALQLDPKNAYAAQGIAIAQIECNKDFAGAVQLFTKVRET---- 809

Query: 664  VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY----EAE 719
              V+   V+INL HVY     ++ A++ Y+  L K     DA IL  L R       +  
Sbjct: 810  --VRDASVYINLGHVYCELKQYSRAIENYEIALSKDRAR-DANILACLGRVWLLKGKQER 866

Query: 720  QWQDCKKSL---LRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAEL 774
              Q  K SL    RA+ +AP    L+F+      + +     L +  R+ +EV +    L
Sbjct: 867  NIQAMKTSLDYSQRALEVAPEQIHLKFNVAFVQIQIAQLIHVLPENSRSLEEVEAAAKGL 926

Query: 775  ENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEA 834
            ++A+  FS ++ + N     F  + I       ++        ++  ER  Q  R+ +E 
Sbjct: 927  DDAIEAFSTIAKSPN---PPFPRQDIEMRANMGRN------TQKKQLERAVQSQREYEE- 976

Query: 835  ARQAALAEEAR--RKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRR 892
             + AA  +EAR  R+AE +K+   +++K E E +RLR+  E  Q+++E+ R         
Sbjct: 977  -KNAAKLKEAREKREAEIRKREEEKRQKEEAEAERLRKIAEERQKMQERDRELAAKRAEE 1035

Query: 893  ERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDA 947
            ER   + +    SE      G+RRK+ K           + D  D   E  D DA
Sbjct: 1036 ERRTQEAEMTTDSET-----GERRKRQKKRAGGGGKRKKKGDDSDLEGEGSDSDA 1085


>gi|157939607|gb|ABW05528.1| SH2 domain binding protein [Cypridopsis vidua]
          Length = 177

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 106/177 (59%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL ++   +PALLG+AC+ +N+  Y  +L FY++AL+   +CP  +RLG   C
Sbjct: 1   ADAQFNFVLNSNPGLIPALLGKACISYNKKDYKGALAFYRKALRTKTNCPAEVRLGFAYC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KL    KAR AFQRAL +DP  V ALV LA+MD  +     IR G+E++ +A+ I   
Sbjct: 61  FLKLNNHEKARMAFQRALDIDPNCVGALVGLAIMDFNSQTTERIRAGVERLSKAYSIDNT 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             M LN+LANHFFF  Q+   + L   A   T +   K  S+Y LAR +H +GDY++
Sbjct: 121 NPMLLNHLANHFFFKKQYDKAQMLAFHAFHYTENETMKGESFYQLARCFHVQGDYDQ 177


>gi|262302929|gb|ACY44057.1| SH2 domain binding protein [Metajapyx subterraneus]
          Length = 178

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 108/178 (60%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +PSCP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSINNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPSCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KA  AF+RAL LD   V ALV LA++ L   E   IR G+  +  A+ I   
Sbjct: 61  FMKLGNEKKAWLAFERALDLDRGCVGALVGLAILKLNQQEEESIRSGVHMLSHAYSIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKRDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQADYDQA 178


>gi|262302947|gb|ACY44066.1| SH2 domain binding protein [Machiloides banksi]
          Length = 178

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 111/178 (62%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ +N+  Y  +L +YK+AL+ +P+CP A+RLG+  C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAYNKKDYRGALAYYKKALRTNPNCPAAVRLGMAHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL LD + V ALV L+++ L       IR G++ + +A+ I   
Sbjct: 61  FMKLGNQEKARLAFERALHLDSQCVGALVGLSILKLNQQHPDDIRTGVQMLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQA 178


>gi|317037100|ref|XP_001398431.2| RNA polymerase II transcription elongation factor (Ctr9) [Aspergillus
            niger CBS 513.88]
          Length = 1214

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 242/984 (24%), Positives = 402/984 (40%), Gaps = 182/984 (18%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ T+ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 134  GELYTEAKTKDHYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVD 193

Query: 99   ----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   PS 
Sbjct: 194  TSERVESLRQALKCFDESSKAFGGRNVMAILGRARTQYLLGRYAEALEGYQKVLMKMPSL 253

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A
Sbjct: 254  TDPDPRIGIGSCLWQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPA 313

Query: 203  AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G   +  M +  Q+AF+I     M  +    +F     +  VE L   A+  T+     
Sbjct: 314  FGSLYKVAMTQYTQKAFKIDKEYPMTCSLFGGYFLLRKAYSTVETLARKAIEHTDVMQIA 373

Query: 260  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
            S  +Y L R  H +GD  +A  YY  S +      +   P  +G  Q+Q+   DF  A  
Sbjct: 374  SDGWYLLGRKSHYEGDLTRAAEYYNRSDQARGGGEKGYLPAKFGTVQMQVSNKDFDGAKF 433

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--------K 356
              EK+++    N E +  LG ++ +                +I+KA  LL         +
Sbjct: 434  RLEKIIQ-QTKNAECMVLLGALHAEEVFAAQRSGSKEDKSVEIKKAINLLESVRALWKDE 492

Query: 357  AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE--------------- 400
              KI P D    + L  L   S    ++        + L +  EE               
Sbjct: 493  TKKISP-DESVLVYLARLYEQSAPEKSMQCLTQLEEMQLAEVAEEERPEGVEDEEQVKAA 551

Query: 401  ----VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
                +P ++LNN+G   ++  + E A   F+ AL        + SK K   +D  A +  
Sbjct: 552  LRVHLPPQLLNNMGCFLYQAEKIERARTMFQAALD-----ACVRSKEKESELDTDALV-- 604

Query: 457  FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 516
                                    T+ FNL R  E       A  +Y+ +L ++ DY +A
Sbjct: 605  -----------------------TTISFNLGRTYEAADMPEEAKKVYQGLLERHADYTEA 641

Query: 517  YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAAS 575
              RL  IA       L     +E  K   K   A S   +LE++    W  +K   RAA+
Sbjct: 642  NARLTYIA-------LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAAN 692

Query: 576  DATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKEL 618
             A D +              D Y+   +GN +   A  +R +    K +   + E+A E 
Sbjct: 693  LAEDHEQRHYKHTLQYYDKHDRYSLTGMGNIHLSTARDMRRDSDQDKEKRRKMYERAVEF 752

Query: 619  YTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
            + + +     N YAA G  + L + K     +  +F+++++       ++   V++NL H
Sbjct: 753  FDKALQLDPRNAYAAQGIAIALVDDKKDHASAVHIFSKIRDT------LRDASVYLNLGH 806

Query: 678  VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSL---LR 730
            VY     +  +++ Y+  L K     DAQIL  L R       +    Q  K +L    R
Sbjct: 807  VYAELRQYTRSIEHYEAALSKDRAR-DAQILACLGRVWLAKGKQEMNLQAMKTALDYAQR 865

Query: 731  AIHLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAAS 788
            A  +AP    L F+      + ++ T  L +T++T  +V+     L+ AV  F+ ++ A 
Sbjct: 866  AHSVAPGQVHLEFNVAFVQNQIASLTYGLPETQKTVQDVQDAAEGLQQAVETFNRVAQAK 925

Query: 789  NL-HLHGFDEKKINTHVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAAR 836
            N  +     E++ N      K L  A +  +E           A E  E + RQR+E  R
Sbjct: 926  NPPYPSSALEQRANMGRTILKQLERALQSQKEYEEKNAAKLQQAREAREAEKRQREEEVR 985

Query: 837  QAALAEEAR--RKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRER 894
            +A  AE  R  R AEE+++ + E ++L +++    +  E  +   E   S T A  +R  
Sbjct: 986  KAQEAERERKQRVAEERQRMIEEAQRLAEQRAEEERAREEAELTTE---SETGAKVKR-- 1040

Query: 895  SENDDDEVGHSEKRRRKGGKRRKK 918
                        K+R    KR+KK
Sbjct: 1041 ------------KKRTTSTKRKKK 1052


>gi|451854332|gb|EMD67625.1| hypothetical protein COCSADRAFT_83023 [Cochliobolus sativus ND90Pr]
          Length = 1165

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 228/960 (23%), Positives = 387/960 (40%), Gaps = 176/960 (18%)

Query: 36  ERIAILNALGVYYTYLGKIETKQREKEEH---------FIL--ATQYYNKASRIDMHEPS 84
           +R++ILN  G+ + YL K     R + ++         F +  AT   N ASRI    P 
Sbjct: 91  DRLSILN--GLCWLYLLKCREAPRVRPQNADPDTKLKEFWIQSATGVLNDASRISPSHPP 148

Query: 85  TWVGKGQLLLAKGEVE-------------------QASSAFKIVLEADRD-NVPALLGQA 124
            ++ +G L L K  ++                   QA+  F+  L A    N+ A +G+A
Sbjct: 149 LFLARGVLYLLKASLQGPATAAGSTVSPERMETLKQAAKCFEDALRASGGRNLMAKMGKA 208

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
            V ++ G+++D+L+ Y+  L+  P    P   R+GIG C ++LG   +A  A+QR+L+L+
Sbjct: 209 RVNYSMGKWADALKAYQNILESSPDLIDPDP-RIGIGCCFWQLGYKDEAANAWQRSLELN 267

Query: 183 PENVEALVALAVMDLQ--ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           P +  AL+ L + + Q  AN +    K  E +++A   +   A+ L+        T   +
Sbjct: 268 PRSKVALILLGIYNFQQTANLSTSDPKFAELIKKATGEFIQPALKLDNQYPLSCATVGSY 327

Query: 241 LV--------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EIN 291
           L+        E +   A+ +T+     S  +Y  A+  H + +   A  YY  S +    
Sbjct: 328 LILRRDVNKTEDVARRAIELTDTNAIASDGWYLRAKVAHQQDNIALAAEYYSKSDQARGG 387

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ-------- 343
           +   FI   +GL Q+ + + ++  A    EK+L+  P N E    LG +Y +        
Sbjct: 388 EERGFIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-NVEAQTLLGTLYAEDVFNAQNS 446

Query: 344 ------LGQIEKAQELLR--KAAKIDPR-----DAQAFIDLGELLISSDTGAAL------ 384
                   +++KA + L   ++A  DP+     D    ++L  L  +     +L      
Sbjct: 447 KSTEDKSAELKKALKYLESVQSAWKDPKKKVVPDQSVLLNLARLYETEHPERSLKCLEEV 506

Query: 385 --------------DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                         +  +    L     E +P ++LNN+G  HF+   +  A + F+ AL
Sbjct: 507 EQMEIEAIPQEDYPEGIEEGPELTTALREMLPPQLLNNMGCFHFQAERYVRAQELFQVAL 566

Query: 431 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
                   ++++ +   ID  A +                          ++ FNLAR  
Sbjct: 567 -----TACVNAENRDDTIDTDALV-------------------------TSISFNLARTY 596

Query: 491 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
           E    T  A  +Y  +L ++ DYVDA +RL  +A   N        V +  K N      
Sbjct: 597 EAEGQTDEAKKVYNSLLQRHPDYVDARIRLTYMALKENPQDEGPRAVKDLFKQNEDNVEV 656

Query: 551 LSMLGDLELKNDDWVKAKETFR----AASD----------ATDGKDSYATLSLGNWNYFA 596
            ++ G        W   K   R    AA D           +D  D Y+ + +GN  + A
Sbjct: 657 RALYG--------WYVNKSKKRTQNFAADDEQRLYKHTLQKSDKHDRYSLMGMGNI-HLA 707

Query: 597 ALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKD 651
             R   R  + +        E+A E + +V+     N YAA G  + L E K  +  +  
Sbjct: 708 IAREMPRTSEQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIALVEDKKDYSTALQ 767

Query: 652 LFTQVQEAASG-SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 710
           +FT+V+E     SVFV       NL H Y     ++ A++ Y+  L K  +N D +IL  
Sbjct: 768 IFTKVKETLKDHSVFV-------NLGHTYCEIRQYSRAIENYEAALSKNRHN-DPKILAC 819

Query: 711 LARTHYEAEQWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST---- 756
           L R  Y   + +          D  K  L+A   AP++   +F+  VA  +F  +T    
Sbjct: 820 LGRAWYLRAKHERSIAGFRTALDYSKQALKA---APADLNSQFN--VAFVQFQIATMIYS 874

Query: 757 LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAK 815
           L + +RT +EV      L  A+     L+          D   + N         L+ A+
Sbjct: 875 LPEHQRTLEEVDDATTGLTEAIEALEKLAKEETPPFPRADITSRANMGRNTMIKQLERAR 934

Query: 816 IHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHF 875
             + A E E      +    R+A        K   +++ L +KRK  +EQ+RL Q++   
Sbjct: 935 EKQAAYEGENATKLDQARRLREAEKLRREEEKKRLEEEALEKKRKYAEEQERLIQRDREL 994


>gi|342877385|gb|EGU78851.1| hypothetical protein FOXB_10640 [Fusarium oxysporum Fo5176]
          Length = 1212

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 214/889 (24%), Positives = 368/889 (41%), Gaps = 150/889 (16%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ K++   ++L+ G S  I    ++ R ++++++  L   Y +           G  
Sbjct: 80  YAKQHKIDHAIEMLQRGGSA-IQSNSSNPR-DKVSMICCLCWMYLWKSREAPRVAPEGTS 137

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS----------- 103
            ++ + KE +  LAT   N A+R++   P  ++ +G LLL +  ++  S           
Sbjct: 138 VSEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTTGGIGSEKH 197

Query: 104 ----SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
               +A K   +A R     N+ AL+G+A   F+  +Y +SL  Y+  LQ  P       
Sbjct: 198 ELLKTAVKSFDDALRVSQGKNMLALMGKARALFSMHKYPESLTIYQDVLQKMPDLVDPDP 257

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
           R+GIG C ++LG    A+ A++R ++++P++  A + L +  L A+    +         
Sbjct: 258 RIGIGCCFWQLGFKDDAKMAWERCIEINPDSKVANILLGLYYLDASGHVPVNSDEFLKLY 317

Query: 206 RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +K M E  Q++F++     +  +  A +F         ++L   A+  T+     S  +Y
Sbjct: 318 KKAMTEYTQKSFKLDKNLPLTCSTFAGYFLSRKSWDNADKLAHKAIQYTDVNAIASDGWY 377

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKV 323
            LAR  H  GD E+A  YY  + +          P  +G+ Q+ +   D   A    EK+
Sbjct: 378 MLARKEHYDGDTERATDYYRRADEARGGTETGYLPAKFGVAQLSVLKNDLGEAKLRLEKM 437

Query: 324 LEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR--- 363
           ++   +N E +  LG +Y +                +++KA  LL   R A K DP+   
Sbjct: 438 IQQSKNN-EAMILLGTLYAEEVFANQVSDSKEDKSAELKKATALLEGVRNAWK-DPKKAL 495

Query: 364 --DAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKA-GEEV 401
             DA   ++L  L  +     AL   +    L                   +K A  + +
Sbjct: 496 SPDASVLLNLARLYETDHPDKALQCLQQVEQLELDQVPASERPEDSTDEAEIKAALRKSL 555

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
           P ++LNNIG  H +  + E A   F+ ALG  + +   D +  T   DA  S        
Sbjct: 556 PPQLLNNIGCFHSQAEKHELASDLFEAALGACMKIGEKDPEMDT---DALVS-------- 604

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                              T+ FNLAR  E    T  A  +Y  +L ++ DY DA  RLA
Sbjct: 605 -------------------TISFNLARSYESRGLTDKAVEVYESLLARHDDYTDARARLA 645

Query: 522 AIAKARNNLQLSIELV-------NEALKVNGKYPNALSMLGDLE----LKNDDWVKAKET 570
            I   +N  +   + V       N  L+V   Y   L  +G  +    L  D+  +    
Sbjct: 646 YIKLRKNPNKEGPDAVAKLYQENNTDLEVRALYGWYLGRVGSRKRPANLGEDNEFR---H 702

Query: 571 FRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHT 627
           F+      D  D +A + +GN     A  +R E  + K + +    KA E + + +    
Sbjct: 703 FKHTLQNYDKHDRHALVGMGNLYLMQAREMRRESDSEKQKRSATYGKAVEFFDKALSLDP 762

Query: 628 SNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 686
            N YAA G  + L E K  +  +  +F +V+E    S       +++NL H+Y     ++
Sbjct: 763 KNAYAAQGVAIALVEDKKDYKAALGIFNKVRETIRDS------HLYVNLGHIYAELRQYS 816

Query: 687 LAMKMYQNCLRKFYYNTDAQILLYLARTHYE---AEQWQDCKKSLL----RAIHLAPSNY 739
            A++ Y+  L K     DA IL  L RT      AE+  D     L    +A+ +AP   
Sbjct: 817 KAIEHYEIALSKDGKANDATILACLGRTWLNRGRAERDVDAHIKALECAQKALEVAPEQM 876

Query: 740 TLRFD-AGVAMQKFS-ASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 786
             +F+ A V +Q  +    L + +R+ +++      LE A+     ++A
Sbjct: 877 HYKFNVAFVQIQLVTMVQGLPENKRSTEQLEKAAEGLEAAIASLDEIAA 925


>gi|452840938|gb|EME42875.1| hypothetical protein DOTSEDRAFT_153030 [Dothistroma septosporum
            NZE10]
          Length = 1194

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 252/1077 (23%), Positives = 449/1077 (41%), Gaps = 214/1077 (19%)

Query: 36   ERIAILNALGVYYTY----LGKIETKQ------REKEEHFILATQYYNKASRIDMHEPST 85
            ER++IL  L   Y +      ++++ Q      R K+     AT   N ASR++   P  
Sbjct: 104  ERLSILVCLCWLYLWKCRKASRVQSTQDTTRDDRTKDHWLKAATSTLNDASRLNPSYPPL 163

Query: 86   WVGKGQLLLAKGEVEQA-----------SSAFKIVLEADR-DNVPALLGQACVEFNRGRY 133
             + +G L + +  ++QA           S  F    ++    NV A++G+A  +++ G+Y
Sbjct: 164  ILVRGTLNILRASLQQAQHERTDSLKQASKNFDDAYKSSSAKNVMAVMGKAKAQYSLGKY 223

Query: 134  SDSLEFYKRALQVHPSCPGAI----RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
            +++   Y++ L+     PG I    R+GIG C ++LG    A++A++RAL L+ ++  A 
Sbjct: 224  AEAYALYQQVLE---RAPGMIDPDPRIGIGCCLWQLGHKENAKEAWERALVLNEDSSVAN 280

Query: 190  VALAV--MD----LQANEAAGIRKGMEKM----QRAFEIYPYCAMALNYLANHFFFTGQH 239
            + L +  +D    L  ++   ++   + M    Q AF+   + A+A       F     +
Sbjct: 281  IMLGLHYLDESNHLSTSDPEFVKIYTKAMTGYTQTAFKKNGWNALACVTFGGFFLLRKNY 340

Query: 240  FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY-MASVKEINKPHEFIF 298
              VE+L   A+  T+     S  +Y LAR  H +GD  KA  +Y  A          F+ 
Sbjct: 341  ANVERLARRAIEQTDLNAIASDGWYLLARMEHYQGDLAKAQDFYGKADQARGGDERGFLP 400

Query: 299  PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ-------LGQIEKAQ 351
              +G+ Q++  + DF  A    EK++     + E +  LG ++ +        G  E   
Sbjct: 401  AKFGVAQLKTLMQDFDGAKFRLEKII-TASKSVEAMTLLGILHAEDVFAAQANGSKEDKS 459

Query: 352  ELLRKAA---------------KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LK 395
            +  +KA                KI P D    ++L  L  S     AL   +    + L 
Sbjct: 460  DSRKKAIALLEQVRIAWKDAKRKITP-DHSVLLNLARLYESDQPEKALACLQQVEQMELD 518

Query: 396  KAGEE-VPIEV------------------LNNIGVIHFEKGEFESAHQSFKDALGDGIWL 436
            +  E+ +P E+                  LNNIG  +F   +   A   F+ AL   + +
Sbjct: 519  EISEDDLPEELDDEDAIREAKRSMLSPQLLNNIGCFYFHADKHTIARAYFQSALNSSVSI 578

Query: 437  TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 496
               D    T   DA  S                           TV +NLAR  E     
Sbjct: 579  QHKDESVDT---DALVS---------------------------TVSYNLARTYEAEGVE 608

Query: 497  VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK-------------- 542
              A  +Y  +L ++ DY+DA  R+A +A     LQ   E   +A+K              
Sbjct: 609  KEAQKVYNGLLTRHPDYIDANTRMAFLA-----LQTEPEKGAQAIKTLLDADPSNLEIRA 663

Query: 543  VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 602
            ++G Y N       L+L +D   + +  ++      D  D Y+   +GN N   A    +
Sbjct: 664  LHGWYLNKHKKRT-LQLSDD---QEQRHYKHTLMTYDKHDIYSLTGMGNLNMAVA----R 715

Query: 603  RAPKLEATHLEK-------AKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFT 654
              P+    H E+       A E + +V++    N YAA G G+ +AE K     +  +FT
Sbjct: 716  ELPRDTDQHKERRTKTYMRAVEFFDKVLLLDPKNAYAAQGMGIAMAEDKKDTSAAVKIFT 775

Query: 655  QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART 714
            QV+E+      ++   V +NL HV+     ++ +++ Y+  L+K     D QI+  L R 
Sbjct: 776  QVRES------IKDASVHVNLGHVFCELKQYSKSIENYELALQK-SKQKDPQIMACLGRA 828

Query: 715  HY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFSASTLQK--TRRTAD 765
                  AE+  D  +  L    +A+ +AP N   RF+   A  + +   + +    +T+ 
Sbjct: 829  WLLRGRAERNLDYFQMSLDLSKQALEVAPDNTNFRFNVAFAQFQVAQQMISQPEANKTSK 888

Query: 766  EVRSTVAELENAVRVFSHLS-AASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE 824
            +V  +  +L+ A+  F  ++ + S     G  E++ N      K  L A+ I R+A    
Sbjct: 889  DVEQSSKDLDTAIESFIEIAKSPSPPFPRGDIEQRANMGRNTMKRQL-ASAIERQA--EY 945

Query: 825  EQQNRQRQEAARQAALAEEARRKAEEQKKYLLEK-----RKLEDEQKRLRQQ-------- 871
            E++N  R E AR+    EE  RK E++K+  LEK     RK+ DE++R++++        
Sbjct: 946  ERKNATRIEEARKTR--EEEMRKREDEKRAALEKAEEQKRKILDERRRMKEEDDALIARK 1003

Query: 872  -EEHFQRVKEQWRSSTPASKRRER-----------SENDD-DEVGHSEKRRRKGG----- 913
             EE   R + ++ +    ++R+              + DD D  G   + R +       
Sbjct: 1004 LEEEKARHEAEYTTDEDGTRRKREKKPKEKRQKRKKKTDDTDTEGDGSRPRSRATSTPVS 1063

Query: 914  -------KRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDD 963
                   K+R+ ++   +   ++Y   +M++  +  ED+DA +   +P  Q ++Q++
Sbjct: 1064 DGEPRQKKKRRLERKGTAVKSSKYKSTEMVE--DSDEDDDAGI---QPATQQSEQEE 1115


>gi|349804747|gb|AEQ17846.1| hypothetical protein [Hymenochirus curtipes]
          Length = 341

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 149/262 (56%), Gaps = 30/262 (11%)

Query: 613 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVW 672
           ++A  +Y +V+   + NLYAANG G VLA KG    ++D+F QV+EA +      + DVW
Sbjct: 96  QRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYVREARDVFAQVREATAD-----ISDVW 150

Query: 673 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI 732
           +NLAH+Y  Q  F  A++MY+NCLRKFY + + ++LLYLAR  ++  + Q+CK+ +L+A 
Sbjct: 151 LNLAHIYVEQKQFIRAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQ-ILKAR 209

Query: 733 HLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHL 792
           H+AP++  L F+  + +Q+ +   L K      EV + V ELE A R F++LS       
Sbjct: 210 HVAPNDTVLMFNVALVLQRLATLVL-KDESNLKEVLNAVKELELAHRYFNYLSKVG---- 264

Query: 793 HGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQK 852
              D+ + +     C  LL  A+ H   A +++++ +             E R K E++K
Sbjct: 265 ---DKMRFDLQ---CSDLLSQAQYHVARARKQDEEEK-------------ELRAKQEQEK 305

Query: 853 KYLLEKRKLEDEQKRLRQQEEH 874
           + L +K   E E+KRL++ EE 
Sbjct: 306 EVLRQKLMKEQEEKRLKEIEEQ 327



 Score = 43.1 bits (100), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 20/194 (10%)

Query: 4   EYFKQGKVEQFRQILEEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKE 62
           EYFKQGK E F ++LE       +D  Y D   +++  L+ L  YY        +QR   
Sbjct: 50  EYFKQGKTEDFVKLLEAARIDGNLD--YRDHEKDQMTCLDTLAAYY-------VQQR--- 97

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
                A   Y +  R D        G G +L  KG V +A   F  V EA  D     L 
Sbjct: 98  -----ALAIYKQVLRNDSKNLYAANGIGAVLAHKGYVREARDVFAQVREATADISDVWLN 152

Query: 123 QACVEFNRGRYSDSLEFYKRAL-QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
            A +   + ++  +++ Y+  L + +      + L +    +K G+L + +Q   +A  +
Sbjct: 153 LAHIYVEQKQFIRAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQIL-KARHV 211

Query: 182 DPENVEALVALAVM 195
            P +   +  +A++
Sbjct: 212 APNDTVLMFNVALV 225


>gi|408395892|gb|EKJ75064.1| hypothetical protein FPSE_04776 [Fusarium pseudograminearum CS3096]
          Length = 1219

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 218/900 (24%), Positives = 368/900 (40%), Gaps = 172/900 (19%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ KV+   ++L+ G + EI +  A+ R +R++++  L   Y +           G  
Sbjct: 80  YAKQHKVDHAIEMLQRGGN-EIQKNSANPR-DRVSMVCCLCWMYLWKSREAPRVAPEGTS 137

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS----------- 103
            ++ + KE +  LAT   N A+R++   P  ++ +G LLL +  ++  S           
Sbjct: 138 VSEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKH 197

Query: 104 ----SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
               +A K   +A R     N+ AL+G+A   F+  +Y +SL  Y+  LQ  P       
Sbjct: 198 ELLKTAVKSFDDALRVSQGKNMLALMGKARALFSMHKYPESLTIYQDVLQKMPDLVDPDP 257

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
           R+GIG C ++LG    A+ A++R L+++P +  A + L +  L A+    +         
Sbjct: 258 RIGIGCCFWQLGFKDDAKMAWERCLEINPNSKVANILLGLYYLDASGHVPVNSDDFLKLY 317

Query: 206 RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +K M E  Q++F++     +  +  + +F        V++L   A+  T+     S  +Y
Sbjct: 318 KKAMTEYAQKSFKLDKDVPLTCSTFSGYFLSRKAWDNVDKLAHKAIQYTDVNAIASDGWY 377

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKV 323
            LAR  H  GD E+A  YY  + +          P  +G+ Q+ +   D   A    EK+
Sbjct: 378 LLARKEHYTGDIERAADYYRRADEARGGTETGYLPAKFGVAQLSVMKNDLGEAKLRLEKM 437

Query: 324 LEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR--- 363
           ++    N E +  LG +Y +                +++KA  LL   R A K DP+   
Sbjct: 438 IQ-QSKNHEAMILLGTLYAEEVFANQVSDSKEDKSAELKKAITLLESVRNAWK-DPKRAL 495

Query: 364 --DAQAFIDLGELLISSDTGAALDAFKTARTL-------------LKKAGE-------EV 401
             DA   ++L  L  +     AL   +    L             +  A E        +
Sbjct: 496 SPDASVLLNLARLYETDQPDKALQCLQQVEQLELDQVPDSEQPEDITDAAEIKAALRKSL 555

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
           P ++LNNIG  H +  + E A   F+ ALG  I +   D    T   DA  S        
Sbjct: 556 PPQLLNNIGCFHSQAEKHELASDMFEAALGACIKIGEKDPDMDT---DALVS-------- 604

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                              T+ FNLAR  E    T  A+ +Y  +L ++ DY DA  RLA
Sbjct: 605 -------------------TISFNLARSYESRGLTDKATEVYEGLLARHDDYTDARARLA 645

Query: 522 AIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKND-DWVKAKETFRAAS 575
            I K R N              N + P+A++ L      DLE++    W   K   R   
Sbjct: 646 YI-KLRKN-------------PNKEGPDAVAKLYQENNTDLEVRALYGWYLGKVHSRKRP 691

Query: 576 -----DAT-----------DGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAK 616
                DA            D  D +A + +GN     A  +R E  + K + + +  KA 
Sbjct: 692 ANLNEDAEFRHYKHTLQNYDKHDRHALVGMGNLYLMQAREMRRESDSDKQKRSAIYAKAV 751

Query: 617 ELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
           E + + +     N YAA G  + L E K     +  +F +V+E    S       +++NL
Sbjct: 752 EFFEKALSLDPKNAYAAQGIAIALVEDKKDHKSALGIFNKVRETLRDS------HLYVNL 805

Query: 676 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSL 728
            HV+     ++ A++ Y+  L K     D  IL  L RT         + + +    +  
Sbjct: 806 GHVFAELRQYSKAIEHYEIALSKDGKKDDPTILACLGRTWLNRGRAERDVDSYNKALECA 865

Query: 729 LRAIHLAPSNYTLRFD-AGVAMQKFS-ASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 786
            +A+ +AP     +F+ A V +Q  +    L + +R+ +++      LE+A+     ++A
Sbjct: 866 QKALEVAPEQVHYKFNVAFVQIQLVTLVQGLPENKRSTEQLEKAAEGLESAITSLDEIAA 925


>gi|336469629|gb|EGO57791.1| hypothetical protein NEUTE1DRAFT_122149 [Neurospora tetrasperma
           FGSC 2508]
 gi|350290721|gb|EGZ71935.1| hypothetical protein NEUTE2DRAFT_111035 [Neurospora tetrasperma
           FGSC 2509]
          Length = 1277

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 231/975 (23%), Positives = 403/975 (41%), Gaps = 195/975 (20%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ K++   ++L +G+    +   A+   E+++I++AL   Y +           G +
Sbjct: 88  YAKQKKIDFAIEMLIKGA----NAMQANNPREKLSIVSALCWMYLWKSREAPRVAPEGAL 143

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA--------- 105
            ++ + KE +  LATQ  N+ASRI+   P  ++ +G L L +  ++  S A         
Sbjct: 144 VSEAKTKEYYLQLATQSLNEASRINPAFPPLFLARGVLQLLRASLQPPSKAPGAVDPEKT 203

Query: 106 --FKIVLEADRD--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
              +  L++  D        N+ A++G+A   F+ GRY+D+L  Y+ AL   P       
Sbjct: 204 ETLRAALKSFDDALRVSSGKNMLAVIGKARALFSLGRYADALVAYQDALARAPDLVDPDP 263

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
           R+GIG C ++LG    AR A++RAL+++ E+    + L +  L A+    I         
Sbjct: 264 RIGIGCCFWQLGYKDDARIAWERALEINAESKVGNILLGLYYLDASGHVPINSPEFIKLY 323

Query: 206 RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +K M E  Q+++++     +     A++F    Q   VE L   A+  T+     S  +Y
Sbjct: 324 KKAMTEYTQKSYKLDKDLPLTCATFASYFLSRKQFDHVEALAHKAIQFTDVNAIASDGWY 383

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKV 323
            LAR  H   + E+A  YY  +            P  +G  Q+ +   D   A    EK+
Sbjct: 384 LLARKEHYANNLERAADYYRRADDARGGTERGYLPAKFGAAQLSVIKNDLGEAKLRLEKM 443

Query: 324 LEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR---- 363
           ++    N E +  LG++Y +                + +KA  LL   + A  DP+    
Sbjct: 444 IQ-QSKNYEAMILLGNLYAEEVFANQFAPVKEDKSAEAKKAIGLLESVRTAWKDPKKSLA 502

Query: 364 -DAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKAGEE-VP 402
            DA   ++L  L  + +   AL   +    L                   +K A    +P
Sbjct: 503 PDAAVLLNLARLYETENPDKALQCLQQVEQLELDQVPQSERPDEVEGEAAIKAALRRFLP 562

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
            ++LNNIG  ++++ + E A + F+ AL                    S+ M        
Sbjct: 563 PQLLNNIGCFYYQEEKHELASELFEAAL--------------------SSCM-------- 594

Query: 463 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
             R     +  +      T+ FNL R  E    +  A  +Y  +L ++ DY DA +RLA 
Sbjct: 595 --RIGETDDDTDTDALVTTISFNLGRSYEARGMSEKAVEVYEGLLKRHDDYTDARIRLAY 652

Query: 523 IAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAKETFRA--- 573
           I K RNN                + P+A++ L      DLE++    W   K + R    
Sbjct: 653 I-KLRNN------------PGTKEGPDAVAKLYQENSSDLEVRALYGWFLGKLSSRKRPN 699

Query: 574 --ASDAT-----------DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKE 617
             A D             D  D YA + +GN +  +A  +R E  A + + +    +A E
Sbjct: 700 NIAEDPEQRHYKHTLQNYDKHDRYALVGMGNLHLISAREMRRESEADRQKRSAAYSRAVE 759

Query: 618 LYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 676
            + + +     N YAA G  + L E K  +  +  +F +V+E       ++   V++NL 
Sbjct: 760 FFDKALQLDPKNAYAAQGIAIALVEDKKDYKGALQIFIKVRET------IKDVHVFVNLG 813

Query: 677 HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL---- 729
           H+Y     F  A++ Y+  L K     DA IL  L RT      AE+  D  K+ L    
Sbjct: 814 HIYAELKQFTKAIESYEIALGKEGKAKDANILSCLGRTWLNKGRAERNLDAYKTALEYAQ 873

Query: 730 RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAA 787
           + + +AP     +F+      + ++  + L + +RT+ ++    + LE+A+     ++A+
Sbjct: 874 KTLEVAPEQVHFKFNVAFVQIQLASFINGLPEHQRTSTQLEEAASGLESAITALDEIAAS 933

Query: 788 SNLHLHGFDEKKINTHVEYCKHLLDA-AKIHREAAEREEQQNRQRQEAARQAALAEEARR 846
                          H  Y KH ++  A + R         N QR++  R  A   +   
Sbjct: 934 D--------------HPPYPKHDIEQRANMAR---------NTQRKQLERALASQRDYES 970

Query: 847 KAEEQKKYLLEKRKL 861
           K +E+ +  LE+R++
Sbjct: 971 KNKEKLQLALEQRQV 985


>gi|389741651|gb|EIM82839.1| RNA polymerase II-associated protein [Stereum hirsutum FP-91666 SS1]
          Length = 1120

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 206/939 (21%), Positives = 396/939 (42%), Gaps = 155/939 (16%)

Query: 54   IETKQREKEEHFILATQYYNKASRIDMHE---PST--WVGKGQLLLAKGEVEQASSAFKI 108
            I T+++ ++EH   AT+Y N+  +    E   PS    + +    L+   ++ A   F+ 
Sbjct: 120  IMTQEKSRDEHMREATRYLNECEKTCNQEGIPPSQLFMLTRATYQLSNRSLDDALREFEA 179

Query: 109  VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
            +L A   N+ AL+G+A + + R +++ SL+ +++ LQ++PSC    R+GIGLC + L   
Sbjct: 180  ILSAYPRNLIALMGKARILYARRQFAMSLKAFQQVLQLNPSCLPDPRIGIGLCLWALNHK 239

Query: 169  GKARQAFQRALQLDPENVEALVALAVMDL---------QANEAAGIRKGMEKMQRAFEIY 219
             +A+ A+QR+++++P    A V L +  L         +A  A  I  G + ++ AF+  
Sbjct: 240  EQAKAAWQRSIEVNPSEWSAHVLLGLEALNTSKSPLLSEAERAHEIMTGTKLIESAFKAN 299

Query: 220  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
               A A N L + F   GQ+    +L E  +   +     +  Y    R  HS+G Y+ A
Sbjct: 300  QRNAAAANALCDIFLRKGQYKRALKLAERTIQFADTVTLLNEGYIRAGRVCHSEGSYDDA 359

Query: 280  GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL-- 337
              ++  +   + K    +    GL Q+Q++  +   A+   + +L+  P+   +L+A   
Sbjct: 360  TKHFKVAASGMPK---NVLAAIGLAQMQMRNDEIPGAIHTLDTLLQP-PNPQRSLEATVM 415

Query: 338  -----GHIYVQLGQIEKAQELLR------------------------------------K 356
                  H    +   + A E +R                                    +
Sbjct: 416  LASLRAHPRPGVSSSDAASEKIRARELFDRVAKAIEQGNDQHALATSNGRQNGHSAQSHQ 475

Query: 357  AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 416
             +++   D Q  I++ +L  +        AF  A  + + +  E P  +LNN+GV+   +
Sbjct: 476  PSRLVANDIQMHIEVAKLWQNESLDRTGKAFSEALKISEASRGEDP-RLLNNLGVLAHLE 534

Query: 417  GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
            G+ + A   ++ AL            T    +  SA+ ++  D +               
Sbjct: 535  GKTDVARGWYERAL------------TGVSALSGSAAGVKGADGEAM------------- 569

Query: 477  WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
                ++L+NLAR+ E + +   A   Y  +L ++ +YVDA +R A +    N    + +L
Sbjct: 570  --STSILYNLARMYEDVGEHTMAGEAYDKLLERHPEYVDAKIRQAHMLSHLNKQNEAHDL 627

Query: 537  VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFA 596
            + + L       N  S      + ++    A++   A     D  D YA  +    +Y  
Sbjct: 628  LKQCLTSQPSNLNLRSYYTYFLILSNSTKLARDFVFATLKDHDKHDVYALCACAWVHYHI 687

Query: 597  ALRNEKRAPKL---EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL- 652
            A  N   + K          ++ E Y + +    +   AA G  +V AE     +   L 
Sbjct: 688  ARENRDTSTKGVEERRKFFSRSSEFYVKALEMDPTCAVAAQGLAIVTAEDALGSLGGSLP 747

Query: 653  ---------------------FTQVQEAA-SGSVFVQMPDVWINLAHVYFAQGNFALAMK 690
                                 F +V+E+   GSV+V       N+ H Y+A+  +  A++
Sbjct: 748  PGPQPDDALRRGQNAREALEVFAKVRESMDDGSVYV-------NMGHCYYARDEYDRAIE 800

Query: 691  MYQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSLL---RAIHLAPSNYTLRF 743
             Y+   R++Y   +   L  L R+ Y    + + +     +L    +A+H+ PS+ ++ +
Sbjct: 801  CYETASRRYYSGQNVPALQCLCRSWYGKANKDQSFVAMNTALTYAQKALHIQPSDKSILY 860

Query: 744  DAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSA-ASNLHLHGFD---- 796
            +  +  QK +    ++Q  +RT  +++  + +  +A ++F+ L+A  S++  +  D    
Sbjct: 861  NIAMIQQKAAEMLFSIQPAKRTLKDLQRAIQQAGHAQKLFATLAADPSSVVPYNKDIADQ 920

Query: 797  --------EKKINTHV-------EYCKHLLDAAKIHR-EAAEREEQQNRQRQEAARQAA- 839
                     +K + H+       E  +  LD A+  R E  ER E   R+R +A R+ A 
Sbjct: 921  RRKYGESMLRKQDEHLKQQREYEEGVRMKLDTARQRRQEEKERHEAVARERVDALRKEAE 980

Query: 840  -LAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQR 877
             LAE+ RRKA E+ K   +  ++E + +R R+ ++   R
Sbjct: 981  DLAEQ-RRKAREEAKEWSKNVQMESDDERERKAKKAANR 1018


>gi|262302933|gb|ACY44059.1| SH2 domain binding protein [Libinia emarginata]
          Length = 178

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 110/178 (61%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL     N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSASNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL+LD   V ALV LAV++L   +   IR+G++ + +A++I   
Sbjct: 61  FMKLGNQEKARLAFERALELDSMCVGALVGLAVLELNEKKPENIRRGVQMLSKAYDIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+L NHFFF      V  L   A   T +   ++ S Y +AR++H + DY +A
Sbjct: 121 NPMVLNHLGNHFFFKQDFQKVHHLGLHAFHNTENESMRAESCYQMARAFHVQEDYSQA 178



 Score = 39.7 bits (91), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 312 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           D+R AL  ++K L   P+    ++  +GH +++LG  EKA+    +A ++D     A + 
Sbjct: 31  DYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLGNQEKARLAFERALELDSMCVGALVG 90

Query: 371 LGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNNIGVIHFEKGEFESAHQ 424
           L  L ++       +  +    +L KA       P+ VLN++G   F K +F+  H 
Sbjct: 91  LAVLELNEKKP---ENIRRGVQMLSKAYDIDSTNPM-VLNHLGNHFFFKQDFQKVHH 143


>gi|350634082|gb|EHA22446.1| hypothetical protein ASPNIDRAFT_128938 [Aspergillus niger ATCC 1015]
          Length = 1457

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 231/928 (24%), Positives = 384/928 (41%), Gaps = 167/928 (17%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ T+ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 578  GELYTEAKTKDHYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVD 637

Query: 99   ----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   PS 
Sbjct: 638  TSERVESLRQALKCFDESSKAFGGRNVMAILGRARTQYLLGRYAEALEGYQKVLMKMPSL 697

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A
Sbjct: 698  TDPDPRIGIGSCLWQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPA 757

Query: 203  AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G   +  M +  Q+AF+I     M  +    +F     +  VE L   A+  T+     
Sbjct: 758  FGSLYKVAMTQYTQKAFKIDKEYPMTCSLFGGYFLLRKAYSTVETLARKAIEHTDVMQIA 817

Query: 260  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
            S  +Y L R  H +GD  +A  YY  S +      +   P  +G  Q+Q+   DF  A  
Sbjct: 818  SDGWYLLGRKSHYEGDLTRAAEYYNRSDQARGGGEKGYLPAKFGTVQMQVSNKDFDGAKF 877

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--------K 356
              EK+++    N E +  LG ++ +                +I+KA  LL         +
Sbjct: 878  RLEKIIQ-QTKNAECMVLLGALHAEEVFAAQRSGSKEDKSVEIKKAINLLESVRALWKDE 936

Query: 357  AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE--------------- 400
              KI P D    + L  L   S    ++        + L +  EE               
Sbjct: 937  TKKISP-DESVLVYLARLYEQSAPEKSMQCLTQLEEMQLAEVAEEERPEGVEDEEQVKAA 995

Query: 401  ----VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
                +P ++LNN+G   ++  + E A   F+ AL        + SK K   +D  A +  
Sbjct: 996  LRVHLPPQLLNNMGCFLYQAEKIERARTMFQAALD-----ACVRSKEKESELDTDALV-- 1048

Query: 457  FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 516
                                    T+ FNL R  E       A  +Y+ +L ++ DY +A
Sbjct: 1049 -----------------------TTISFNLGRTYEAADMPEEAKKVYQGLLERHADYTEA 1085

Query: 517  YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAAS 575
              RL  IA       L     +E  K   K   A S   +LE++    W  +K   RAA+
Sbjct: 1086 NARLTYIA-------LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAAN 1136

Query: 576  DATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKEL 618
             A D +              D Y+   +GN +   A  +R +    K +   + E+A E 
Sbjct: 1137 LAEDHEQRHYKHTLQYYDKHDRYSLTGMGNIHLSTARDMRRDSDQDKEKRRKMYERAVEF 1196

Query: 619  YTRVIVQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
            + + +     N YAA G  + L  +K     +  +F+++++    +       V++NL H
Sbjct: 1197 FDKALQLDPRNAYAAQGIAIALVDDKKDHASAVHIFSKIRDTLRDA------SVYLNLGH 1250

Query: 678  VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSL---LR 730
            VY     +  +++ Y+  L K     DAQIL  L R       +    Q  K +L    R
Sbjct: 1251 VYAELRQYTRSIEHYEAALSKDRAR-DAQILACLGRVWLAKGKQEMNLQAMKTALDYAQR 1309

Query: 731  AIHLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAAS 788
            A  +AP    L F+      + ++ T  L +T++T  +V+     L+ AV  F+ ++ A 
Sbjct: 1310 AHSVAPGQVHLEFNVAFVQNQIASLTYGLPETQKTVQDVQDAAEGLQQAVETFNRVAQAK 1369

Query: 789  N-LHLHGFDEKKINTHVEYCKHL------------LDAAKIHREAAEREEQQNRQRQEAA 835
            N  +     E++ N      K L             +AAK+ ++A E  E + RQR+E  
Sbjct: 1370 NPPYPSSALEQRANMGRTILKQLERALQSQKEYEEKNAAKL-QQAREAREAEKRQREEEV 1428

Query: 836  RQAALAEEAR--RKAEEQKKYLLEKRKL 861
            R+A  AE  R  R AEE+++ + E ++L
Sbjct: 1429 RKAQEAERERKQRVAEERQRMIEEAQRL 1456


>gi|262302921|gb|ACY44053.1| SH2 domain binding protein [Hutchinsoniella macracantha]
          Length = 178

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 112/178 (62%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+PA LG+AC+ F++  Y  +L +YK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPAGLGKACIAFSKKDYRGALAYYKKALRANPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL+LDP  V ALV LA++++       I+ G++K+  A+ I   
Sbjct: 61  FMKLGNEDKARLAFERALELDPHCVGALVGLAILEINQETPETIKSGVQKLSTAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEYMRAESCYQLARAFHVQRDYDQA 178



 Score = 43.5 bits (101), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 302 GLGQVQLKLG--DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAA 358
           GLG+  +     D+R AL  ++K L   P+    ++  +GH +++LG  +KA+    +A 
Sbjct: 19  GLGKACIAFSKKDYRGALAYYKKALRANPNCPAAVRLGMGHCFMKLGNEDKARLAFERAL 78

Query: 359 KIDPRDAQAFIDLGELLISSDT 380
           ++DP    A + L  L I+ +T
Sbjct: 79  ELDPHCVGALVGLAILEINQET 100


>gi|149234838|ref|XP_001523298.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146453087|gb|EDK47343.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 1195

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 213/928 (22%), Positives = 395/928 (42%), Gaps = 160/928 (17%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILA--------TQYYNKASRIDMHEPSTWVGKGQLLLA 95
           + +Y+ Y   ++ +  ++ E+ +LA        T+ YN +     +  S  + +  L + 
Sbjct: 105 IWLYFRY-ASVDAQNGDRLENLVLASSAISSLKTKIYNDSQTSVTNSVSNLLAEAVLAIY 163

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCPGAI 154
           +   ++A   F  VL+ D  N  ALLG+A V  ++   Y+ +L+ Y++ L ++P      
Sbjct: 164 QNHDDEAMEIFDRVLKLDHSNCFALLGKAHVTLSKLNNYTLALKLYQQVLLLNPVMKPDP 223

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIRKG 208
           RLGIGLC + L     A+Q+++RAL++DP+N++A + L++  + A      ++   ++  
Sbjct: 224 RLGIGLCFWFLKDEKMAKQSWERALEIDPKNIKAKIFLSLTKIYATLNNSLSDEQFLKDY 283

Query: 209 MEKMQRAFEIYP---YCAMALNYLANHFFFTGQHFLVEQLTE--TALAVTNHGPTKSHSY 263
            E +Q   +++      +  L  L +++F   ++  VE++ +  +   + +   +KS + 
Sbjct: 284 KECLQEVSQLHKGNVTDSTILLVLVSYYFAKQEYDTVERVVKHISQHIIGDSSVSKSATL 343

Query: 264 YN----------------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
                             LAR   ++ D+ +A   +  ++K  N  +  +    GLGQ Q
Sbjct: 344 ITKLSKHQQIVLSECSTWLARVQFAREDFTQASKLFQEAIK-FNDQN--LVAKLGLGQSQ 400

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ------------LGQIEKAQEL-- 353
              G    A   +E +L    D  E   +LG +Y +            +  +E+   L  
Sbjct: 401 FNRGSIEEASLTYESILRTNVDCLEANYSLGILYAKQQLDSRRKKELAIQVLERYIRLSN 460

Query: 354 ---LRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 402
              L  A+K D        P    A++ L +L   +D   +L     A    KK G+++P
Sbjct: 461 NRGLSSASKNDAHMLLNKEPITLNAYLTLSKLYEDTDLNQSLTYLTRAADARKKLGKKIP 520

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
           +E+ NN+GV  F K  F  A +SF+ AL +      L++ T+                  
Sbjct: 521 LEIYNNLGVFKFTKQNFAGAAESFQLALDE------LNAATE------------------ 556

Query: 463 FHRFENDGNHVELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR-- 519
           F   + +   ++LP + K+++ FNLAR  +++ +   A   Y  ++ +  +Y  A LR  
Sbjct: 557 FKSADGEDVLIDLPQDLKISLSFNLAR-SKEVSNENEAYQTYESLIRECPNYFSAKLRIL 615

Query: 520 -LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG--------DLELKNDDWVK-AKE 569
            L+ I+++R +       ++E L +N       S  G         L +K D  V+  K+
Sbjct: 616 FLSCISESRLSTDEIKTEIDELLDLNVLDLEVRSFYGWFVKNFGKKLGMKPDSDVEFQKD 675

Query: 570 TFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHLEKAKELYTRVIVQHT 627
           T        D  D YA LSL N     A  L+N       +  +  +A ELYT+V+    
Sbjct: 676 TLV----EFDKHDCYALLSLANIYCVMARDLKNSSSTELKKKNYYIRAIELYTKVLTVDP 731

Query: 628 SNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 687
            N+YAA G  +   E  +     D+  +++++ +         V++NL HV      F  
Sbjct: 732 KNVYAAQGLAIACIENKESFKGLDILRKIRDSLND------ISVYLNLGHVLCEVKQFGK 785

Query: 688 AMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI--------HLAPSNY 739
           A++ Y+  L ++    D +IL +L R  Y     +   +   RA+        H   S  
Sbjct: 786 AIESYELALARYTDGKDVKILSFLGRAWYLRASNEQNLQFFKRALEYSRQALEHTRGSKS 845

Query: 740 TLRFDAGVAMQKFSASTLQKTR----RTADEVRSTVAELENAVRVFSHLSAASNLH---- 791
            L F+  +A  +F  +     +    R   ++   +  L++A++    L++    H    
Sbjct: 846 ALLFN--IAYVQFQIADFVSKQPVHHRQPQDISDAIDGLQDAIQTLLQLASEDEKHPPYP 903

Query: 792 ---LHG----------------FDEKKINT-----HVEYCKHLLDA---AKIHREAAERE 824
              L G                 DE K N       ++  KH+ +    AKI  E A  E
Sbjct: 904 KDELRGRANLGSSTLLNRLTSALDETKENIASVEQKLQTAKHIREQEKEAKIKEEQARLE 963

Query: 825 EQQNRQRQEAARQAALAEEARRKAEEQK 852
             + ++ Q A  +AAL E+A++ AEE +
Sbjct: 964 MLKEKEAQLAKERAALQEQAQQWAEEAR 991


>gi|157939595|gb|ABW05522.1| SH2 domain binding protein [Lithobius forticatus]
          Length = 177

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 113/177 (63%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+     +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNXVLNQSPNNIPSLLGKACIAFNKKDPRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             +LG+  KAR AF+RAL +D + V ALV +++++L       IR G++ + RA+ I   
Sbjct: 61  FMRLGKPDKARLAFERALNMDSQCVGALVGISILELNNKTPDAIRNGVQMLSRAYAIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             M LN+LANHFFF   +  V+ L   A+  T +   ++ S Y LAR++H +GD+++
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAIHNTENEAMRAESCYQLARAFHVQGDFDQ 177


>gi|46125141|ref|XP_387124.1| hypothetical protein FG06948.1 [Gibberella zeae PH-1]
          Length = 1219

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 217/900 (24%), Positives = 368/900 (40%), Gaps = 172/900 (19%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ KV+   ++L+ G + EI +  A+ R +R++++  L   Y +           G  
Sbjct: 80  YAKQHKVDHAIEMLQRGGN-EIQKNSANPR-DRVSMVCCLCWMYLWKSREAPRVAPEGTP 137

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS----------- 103
            ++ + KE +  LAT   N A+R++   P  ++ +G LLL +  ++  S           
Sbjct: 138 VSEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKH 197

Query: 104 ----SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
               +A K   +A R     N+ AL+G+A   F+  +Y +SL  Y+  LQ  P       
Sbjct: 198 ELLKTAVKSFDDALRVSQGKNMLALMGKARALFSMHKYPESLTIYQDVLQKMPDLVDPDP 257

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
           R+GIG C ++LG    A+ A++R L+++P +  A + L +  L A+    +         
Sbjct: 258 RIGIGCCFWQLGFKDDAKMAWERCLEINPNSKVANILLGLYYLDASGHVPVNSDNFLKLY 317

Query: 206 RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +K M E  Q++F++     +  +  + +F        V++L   A+  T+     S  +Y
Sbjct: 318 KKAMTEYAQKSFKLDKDVPLTCSTFSGYFLSRKAWDNVDKLAHKAIQYTDVNAIASDGWY 377

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKV 323
            LAR  H  GD E+A  YY  + +          P  +G+ Q+ +   D   A    EK+
Sbjct: 378 LLARKEHYTGDIERAADYYRRADEARGGTETGYLPAKFGVAQLSVMKNDLGEAKLRLEKM 437

Query: 324 LEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR--- 363
           ++    N E +  LG +Y +                +++KA  LL   R A K DP+   
Sbjct: 438 IQ-QSKNHEAMILLGTLYAEEVFANQVSDSKEDKSAELKKAITLLESVRNAWK-DPKRAL 495

Query: 364 --DAQAFIDLGELLISSDTGAALDAFKTARTL-------------LKKAGE-------EV 401
             DA   ++L  L  +     AL   +    L             +  A E        +
Sbjct: 496 SPDASVLLNLARLYETDQPDKALQCLQQVEQLELDQVPDSEQPEDVTDAAEIKAALRKSL 555

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
           P ++LNNIG  H +  + E A   F+ ALG  I +   D    T   DA  S        
Sbjct: 556 PPQLLNNIGCFHSQAEKHELASDMFEAALGACIKIGEKDPDMDT---DALVS-------- 604

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                              T+ FNLAR  E    T  A+ +Y  +L ++ DY DA  RLA
Sbjct: 605 -------------------TISFNLARSYESRGLTDKATEVYEGLLARHDDYTDARARLA 645

Query: 522 AIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKND-DWVKAKETFRAAS 575
            I K R N              N + P+A++ L      DLE++    W   K   R   
Sbjct: 646 YI-KLRKN-------------PNKEGPDAVAKLYQENNTDLEVRALYGWYLGKVHSRKRP 691

Query: 576 -----DAT-----------DGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAK 616
                DA            D  D +A + +GN     A  +R E  + K + + +  KA 
Sbjct: 692 ANLNEDAEFRHYKHTLQNYDKHDRHALVGMGNLYLMQAREMRRESDSDKQKRSAIYAKAV 751

Query: 617 ELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
           E + + +     N YAA G  + L E K     +  +F +V+E    S       +++NL
Sbjct: 752 EFFEKALSLDPKNAYAAQGIAIALVEDKKDHKSALGIFNKVRETLRDS------HLYVNL 805

Query: 676 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSL 728
            H++     ++ A++ Y+  L K     D  IL  L RT         + + +    +  
Sbjct: 806 GHIFAELRQYSKAIEHYEIALSKDGKKDDPTILACLGRTWLNRGRAERDVDSYNKALECA 865

Query: 729 LRAIHLAPSNYTLRFD-AGVAMQKFS-ASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 786
            +A+ +AP     +F+ A V +Q  +    L + +R+ +++      LE+A+     ++A
Sbjct: 866 QKALGVAPEQVHYKFNVAFVQIQLVTLVQGLPENKRSTEQLEKAAEGLESAITSLDEIAA 925


>gi|262302961|gb|ACY44073.1| SH2 domain binding protein [Pedetontus saltator]
          Length = 178

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 111/178 (62%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  +  +L +YK+AL+ +P+CP A+RLG+  C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDHRGALAYYKKALRTNPNCPAAVRLGMAHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RALQLD   V ALV L+++ L       IR G++ + +A+ I   
Sbjct: 61  FMKLGNQEKARLAFERALQLDSMCVGALVGLSILKLNQQNPDDIRTGVQMLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GD+++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDFDQA 178


>gi|262302937|gb|ACY44061.1| SH2 domain binding protein [Plathemis lydia]
          Length = 175

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 109/175 (62%), Gaps = 1/175 (0%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYK 164
           F  VL     +VPALLG+AC+ F R  +  +L FYK+AL+  P+ CP  +RLG+G C  K
Sbjct: 1   FNFVLNQSPGSVPALLGKACIAFGRKDFRGALAFYKKALRTSPAACPATVRLGMGHCFMK 60

Query: 165 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
           LG   KAR AF+RAL+LD   V ALV LA++ L   E   IR G++ + +A+ I     M
Sbjct: 61  LGNQEKARLAFERALELDNSCVGALVGLAILQLNLQEPDSIRSGVQMLSKAYTIDSTNPM 120

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
            LN+LANHFFF   +  V+ L   A+  T +   ++ S+Y LAR++H +GDY++A
Sbjct: 121 VLNHLANHFFFKKDYHKVQHLALHAIHNTENEAMRAESFYQLARAFHVQGDYDQA 175


>gi|157939599|gb|ABW05524.1| SH2 domain binding protein [Nebalia hessleri]
          Length = 177

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 110/177 (62%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ +N+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFHFVLNQAPNNIPSLLGKACIAYNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KLG   KAR AF+RAL+LD   V ALV LAV++L   +A  IR+G++ +  A+ I   
Sbjct: 61  FMKLGNQDKARLAFERALELDMNCVGALVGLAVLELNEKKAESIRRGVQMLSTAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             M LN+L NHFFF      V+ L   A   T +   ++ S Y +AR+YH + DY +
Sbjct: 121 NPMVLNHLGNHFFFKHDFQKVQHLALHAFHNTENEAMRAESCYQMARAYHVQEDYSQ 177


>gi|340522553|gb|EGR52786.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1191

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 202/843 (23%), Positives = 341/843 (40%), Gaps = 161/843 (19%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE----------- 100
           G   T+ + KE +  LAT   N A+R++   P  ++ +G LLL +  ++           
Sbjct: 134 GVPATEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQGPSKTAGGLGT 193

Query: 101 -------QASSAFKIVLEADR-DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
                   A+ AF   L   +  N+ AL+G+A   F+  +Y ++L  Y+  LQ  P    
Sbjct: 194 EKSELLKNAAKAFDDALRVSQGKNLLALMGKARTLFSMHKYPEALAAYQDVLQKRPDLVD 253

Query: 153 A-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG--- 208
              R+GIG C ++LG    A+ A++R L+++P++  A + L +  L A+    +      
Sbjct: 254 PDPRIGIGCCFWQLGFKEDAKVAWERCLEINPDSKIANILLGLYYLDASGHVPVNSDEFL 313

Query: 209 -------MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
                  +E  Q+AF++     +     A++F         ++L   A+  T+     S 
Sbjct: 314 KLYKTAMIEYTQKAFKLDKEVPITCVTFASYFLSRKAWDNADKLAHKAIQYTDVNAVASD 373

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNF 320
            +Y LAR  H  GD E+A  YY  +            P  +G+ Q+ +   D   A    
Sbjct: 374 GWYLLARKAHYNGDLERASDYYRRADDARGGTETGYLPAKFGVAQLSVIKNDLGEAKLRL 433

Query: 321 EKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR 363
           EK+++    N E +  LG IY +                +++KA  LL   R + K DP+
Sbjct: 434 EKIIQ-QSKNHEAMILLGTIYAEEIFTSQNNDNKEDRSAEMKKAIALLEGVRNSWK-DPK 491

Query: 364 -----DAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE----------------- 400
                DA   ++L  L  +     AL   +    L +++  E                  
Sbjct: 492 KALSPDASVLLNLARLYETDSPDKALQCLQQVEQLEIEQIPESERPTDVPEAEVQAALRK 551

Query: 401 -VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 459
            +P ++LNN+G  HF+  ++E A + F+ ALG       + +  K   +D  A +     
Sbjct: 552 FLPPQLLNNVGCFHFQAEKYELASEMFEAALG-----ACMRAGEKDPTMDTDALV----- 601

Query: 460 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
                                T+ FNL R  E    T  A  +Y  +L ++ DY DA  R
Sbjct: 602 --------------------TTISFNLGRSYEARGLTDKAVEVYEGLLNRHDDYTDARTR 641

Query: 520 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETF 571
           LA I K R N              N + P+A++ L      DLE++    W   K     
Sbjct: 642 LAYI-KLRKN-------------PNKEGPDAVAKLYQENTADLEVRALYGWYLGKVHSRK 687

Query: 572 RAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLE----ATHLE 613
           R A+ A D +              D YA + +GN  Y    R  +R  + E    +    
Sbjct: 688 RPANIAEDHEFRHYKHTLQNYDKHDRYALVGMGNL-YLVQAREMRRETEQEKQKRSATYS 746

Query: 614 KAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVW 672
           KA E + + +     N YAA G  + L E K  +  +  +F QV++       V+   ++
Sbjct: 747 KAVEFFEKALSLDPKNAYAAQGIAIALVEDKRDYKTALTIFNQVKDT------VKDAHLY 800

Query: 673 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY-------EAEQWQDCK 725
           +NL H+Y     F+ A++ Y+  L K     D  IL  L RT         + + +    
Sbjct: 801 VNLGHIYAELKQFSKAIEHYEIALSKEGKANDPVILSCLGRTWLNRGRADRDVDSYIKAL 860

Query: 726 KSLLRAIHLAPSNYTLRFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSH 783
           +   +A+ +AP     +F+ A V +Q  +    L + RRTA+++      LE A+     
Sbjct: 861 ECAKKALEVAPDQIHYQFNVAFVQIQLVTMIQALPENRRTAEQLEDASQGLEAAIESLDK 920

Query: 784 LSA 786
           ++A
Sbjct: 921 IAA 923


>gi|444323119|ref|XP_004182200.1| hypothetical protein TBLA_0I00160 [Tetrapisispora blattae CBS 6284]
 gi|387515247|emb|CCH62681.1| hypothetical protein TBLA_0I00160 [Tetrapisispora blattae CBS 6284]
          Length = 1095

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 229/1031 (22%), Positives = 425/1031 (41%), Gaps = 181/1031 (17%)

Query: 36   ERIAILNALGVYYTYLGKIE-TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 94
            E+  I   L   +  L K E T  + K+E    A +Y   A  +D    S  +    L  
Sbjct: 89   EKATIYTFLTWAHLNLAKQESTTYKMKDEVLSKAEEYLKHAITLDPTWVSNMLATVDLYY 148

Query: 95   AKGEVEQASSAFKIVLE-----------ADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
             +G  ++A     + ++             + N   +L +A + + + +Y+ SL+ ++  
Sbjct: 149  ERGHYDKALETVDLFIKGIHADDQRNGRVSKPNSMFVLLRAKLLYQKKQYAPSLKLFQEL 208

Query: 144  LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ----- 198
            L ++PS     R+GIGLC ++L     A+ +++R ++LDP+N  A + + + DL      
Sbjct: 209  LVINPSLQPDPRIGIGLCFWQLKDHKMAKTSWERCVELDPKNTTASILVLLSDLHDSLTS 268

Query: 199  -ANEAAGIRKGMEKMQRAFEIYPYC---AMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
              N+   ++K  + ++    +Y       + L  L ++F+  G +  V  +    +A  +
Sbjct: 269  SKNDDDFVKKYTDVLKDLNNLYSSSKPNPVLLTVLQSYFYLKGDYQKVLDIYNDRIAPMD 328

Query: 255  HGPTK---SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
               T    S S +   R+++S GDY  A   +  S+K      + +   +G+ Q Q+K  
Sbjct: 329  FLTTPTVLSDSTFWCGRAFYSIGDYRNAFTMFQTSLK---YNEDNLLSKFGISQTQIKNN 385

Query: 312  DFRSALTNFEKVLE--------------IYPDNCETLKALGHIYV-QLG-QIEKAQELLR 355
                ++ +FE + +              +Y   C   K   HI   +L  Q  KA   L 
Sbjct: 386  LLEESILSFENIYKTHEGVQELNYILGMLYSGKCLDPKLSKHISTNELNKQTNKAISFLE 445

Query: 356  KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEV-------PIEVLNN 408
            K  K+        +     LI S      + +K +   L K  E++       P+E+LNN
Sbjct: 446  KYIKLTLSTKNRMVIPRAYLIISQLYETQNQYKLSMEYLLKVMEQIELANGHIPLEILNN 505

Query: 409  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
            IG  HF  G++E A+  F+ A  +                                   +
Sbjct: 506  IGCFHFINGDYEKANDYFQKANDNC----------------------------------D 531

Query: 469  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR--LAAIAKA 526
            D ++      ++T+ +N+AR  E  HDT  AS LY  IL     Y+ A +R      A +
Sbjct: 532  DDSY------QITIDYNIARTTEN-HDTNKASELYENILNIEPSYLQARMRNLYCKFAYS 584

Query: 527  R-NNLQLSIELVNEALKVN---------------GKYPNALSMLGDLELKNDDWVKAKET 570
            + +N+++    VNE ++ N                K  NA   L + E K  + V+    
Sbjct: 585  KVDNMEVIDSQVNELMESNKSELEMRSFFSWYIKNKINNA--NLDEKEYKQLEDVETNHN 642

Query: 571  FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNL 630
             R      D  D+Y+ +SLGN  Y+    N K  P+       K  +L+ +V+     N+
Sbjct: 643  -RETLTKYDSHDAYSLISLGNL-YWTLGVNNKANPEKSKQSFLKGIQLFQKVLQVDPLNI 700

Query: 631  YAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 690
            +AA G  ++ A+  +   + ++  +V+++          DV INL H      +FA A++
Sbjct: 701  FAAQGLAIIFAQSKRLGPALEILRKVRDSLDNE------DVHINLGHCLLEMNDFAKAIE 754

Query: 691  MYQNCLRKF-YYNTDAQILLYLARTHYE-----------AEQWQDCKKSLLRAIHLAPSN 738
             Y+  L+++     ++ I   L    Y             +  Q+ KK+L   I    S 
Sbjct: 755  SYEYVLKRYESVRNNSSIYNILGHAWYLRGNKEKKLMFFQKALQNSKKAL--KIENNSST 812

Query: 739  YTLR----FDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAELENAVRVFSHLSAASNL 790
             +L+    F   +A+ +F  A TL+K+    RT++++++++  LE A+++   L   S+ 
Sbjct: 813  KSLKKINTFKFNIALLEFQIAETLRKSTPLFRTSEDIKNSLQGLEEALKMLVELKDNSSF 872

Query: 791  HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRK--- 847
                 +E  I   ++     + +A + R   E+EE +N Q  +      + EE  +K   
Sbjct: 873  KFASKEE--IEQRIQLGNTTMKSA-LERCLKEQEEYENEQSIKIENAKKIQEENLQKIRE 929

Query: 848  -------------AEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRER 894
                         A ++++Y    +KL+D+ ++  Q+      + E    +  A+     
Sbjct: 930  QKVKEEEEQKEKLARQEEEY----KKLQDQAQKYIQERAAATEIDE----NDIANDELSG 981

Query: 895  SENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREP 954
             E DDD    S+KR+RK           +S   +   +  ++DY +E  D  A++N    
Sbjct: 982  EERDDDYDNDSKKRKRKVTP-----SDKKSSKRSRKNKKKVVDYDDEESDSGANIN---- 1032

Query: 955  IGQMNDQDDDV 965
                ND++DDV
Sbjct: 1033 ----NDEEDDV 1039


>gi|255943779|ref|XP_002562657.1| Pc20g00960 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587392|emb|CAP85425.1| Pc20g00960 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1197

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 202/839 (24%), Positives = 334/839 (39%), Gaps = 148/839 (17%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 134 GELYSEAKTKDHYLQLATSTLNEASRLNPAYPPLFLARGVLCLLRASLYPPRAVRPGAVD 193

Query: 99  ----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
               VE    A K   E+ +     N+ A+LG+A   +  GRY+D+LE Y++AL   P+ 
Sbjct: 194 TSERVESLRQALKCFDESSKAFGGRNIMAILGRARAHYMLGRYADALEGYQKALIKMPNL 253

Query: 151 PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
                R+G+G C ++LG   +A+ A++R+L L+PE+  A V LAV  L  +        M
Sbjct: 254 TDPDPRIGLGCCLWQLGFKDQAKVAWERSLSLNPESKVANVLLAVYYLHDSSRRATTDPM 313

Query: 210 ----------EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
                     +  Q+AF++     M  +  A++F    Q+  VE L   A+  T+     
Sbjct: 314 FGSMYKLAMTQYTQKAFKLDKEYPMTCSMFASYFLLRKQYPTVETLARKAIEHTDVMSIA 373

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
           S  +Y L R  H +GD  +A  +Y  S +      +   P  +G  Q+Q+   DF  A  
Sbjct: 374 SDGWYLLGRKSHYEGDNARAAEFYNRSDQARGGVDKGYLPAKFGAVQMQITNKDFDGAKF 433

Query: 319 NFEKVLEIYPDNCETLKALGHIYV--------------QLGQIEKAQELLRKA------- 357
             EK+++    N E +  L  I+               +  + ++A  LL          
Sbjct: 434 RLEKIVQ-QSKNPEAMTLLAAIHAEEVFAAQKSGSKEDKSTETKRAITLLESVRSMWKDE 492

Query: 358 -AKIDP------------------RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 398
              I P                  +  Q    L ++ I+     A    +    +     
Sbjct: 493 KQNISPDESVLVYLSRLYEGTAPDKSMQCLTQLEQIQIAEIPEDARPDIEDQEKMNAALR 552

Query: 399 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
           E +P ++LNN+G   ++  +   A   F+ AL        + SK K    D  A +    
Sbjct: 553 ESLPPQLLNNMGCFLYQNDKIALARGLFQSALN-----ACVQSKEKEDGTDTDALV---- 603

Query: 459 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                                 T+ +NL R  E       A  +Y  +L ++ DY +A  
Sbjct: 604 ---------------------TTISYNLGRTYEAADMWDEAKKVYEGLLERHSDYTEANA 642

Query: 519 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAASDA 577
           RL  IA       L     +E  K  GK   A S   +LE+++   W  +K   R A+ A
Sbjct: 643 RLTYIA-------LRQSPTDEGPKKIGKLYEAEST--NLEVRSLYGWYLSKAKKRVANLA 693

Query: 578 TDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELY 619
            D +              D YA   +GN +  AA R+ +R    E        ++A E +
Sbjct: 694 EDSEQRHFKHTLQYYDKHDRYALTGMGNVHLLAA-RDMRRDTDQEKEKRRKIYQRAVEFF 752

Query: 620 TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 679
            + +     N YAA G  + L      D  KD  + VQ  +     ++ P V++NL HV+
Sbjct: 753 DKALQLDPKNAYAAQGIAIAL-----VDDKKDHSSAVQILSKIRDTIKDPSVYLNLGHVF 807

Query: 680 FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAI 732
                F+ +++ Y+  L K     D QIL  L R  +   + E      K+ L    RA 
Sbjct: 808 AELRQFSRSIEHYETALSK-DRQRDVQILACLGRVWWLRGKQEANLAAMKTALDYATRAR 866

Query: 733 HLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
            +AP    L+F+      + +  A  LQ T++T  +V+     L+ A+  F  LS   N
Sbjct: 867 DIAPDQLHLQFNVAFVQNQIASLAYGLQPTQKTLQDVQEAAEGLKEAIETFERLSKEKN 925


>gi|367028110|ref|XP_003663339.1| hypothetical protein MYCTH_2305158 [Myceliophthora thermophila ATCC
           42464]
 gi|347010608|gb|AEO58094.1| hypothetical protein MYCTH_2305158 [Myceliophthora thermophila ATCC
           42464]
          Length = 1320

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 201/798 (25%), Positives = 325/798 (40%), Gaps = 156/798 (19%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV------------ 99
           G   ++ + KE +  LATQ  N ASRI+   P  ++ +G L+L K  +            
Sbjct: 137 GVPASEAKTKEYYLQLATQSLNDASRINPAFPPLFLARGVLILLKASLQPSSKAPGAVDS 196

Query: 100 ---EQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
              EQ  +A K   EA R     N+ A++G+A   F+ GRY +SL  Y+  +   P    
Sbjct: 197 NKAEQLRNALKSFEEAIRVSQGRNMLAVMGKARALFSLGRYPESLAAYQDVVAKMPDMVD 256

Query: 153 A-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGI 205
              R+GIG C ++LG    A+ A++R L+++P++  A + L +  L A      N    I
Sbjct: 257 PDPRIGIGCCFWQLGFKDDAKIAWERCLEINPDSKHANILLGLYYLDASGHVPTNSPEFI 316

Query: 206 R---KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
           R   K M E  Q++F++     +     A +F    Q   V+ L   A+  T+     S 
Sbjct: 317 RLYKKAMTEYTQKSFKLDKNLPLTCATFAGYFLSRKQFGNVDALAHKAIQYTDVNAIASD 376

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNF 320
            +Y LAR  H  G+ E+A  YY  +            P  +G  Q+ +   D   A    
Sbjct: 377 GWYLLARKEHYDGNLERASDYYRRADDARGGAERGYLPAKFGAAQLSVLKNDLGEAKLRL 436

Query: 321 EKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR- 363
           EK+++ +  N E +  LG +Y +                + +KA  LL   ++A  DP+ 
Sbjct: 437 EKMIQ-HSKNYEAMILLGTLYAEEVFANQSAAVKEDKSAEAKKAISLLEGVRSAWKDPKR 495

Query: 364 ----DAQAFIDLGELLISSDTGAALDAFKTARTL--------------------LKKAGE 399
               DA   ++L  L  S     AL   +    L                         +
Sbjct: 496 NLSPDAAVLLNLARLYESESPDKALQCLQQVEQLEIDQIPQSEYPPDAEDEAAARAAIRK 555

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 459
            +P ++LNNIG  + ++G+   A + F+ AL                  D+ A + Q   
Sbjct: 556 LLPPQLLNNIGCFYSQEGKHRLATEFFQAAL------------------DSCARISQT-- 595

Query: 460 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
                  END   +++     T+ FNL R  E   D   A   Y  +L ++ DY DA  R
Sbjct: 596 -------END---LDIDALLTTIPFNLGRSYEYEGDIDKAIETYEQLLSRHSDYTDARTR 645

Query: 520 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETF 571
           LA I   RN               N + P+A++ L      DLE++    W   K     
Sbjct: 646 LAYIKLRRN--------------PNKEGPDAVAKLYQENPSDLEVRGLYGWFLSKVNSKK 691

Query: 572 RAASDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEK 614
           R A+ A D +              D YA + +GN +  AA  +R E    + + +    +
Sbjct: 692 RPANIAEDPEQRHYKHTLQSYDKHDRYALVGMGNLHLMAAREMRRETEQDRQKRSAAYNR 751

Query: 615 AKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
           A E + + +     N YAA G  + L E +  +  +  +F +V+E       +Q   V++
Sbjct: 752 AVEFFDKALQLDPKNAYAAQGIAIALVEDRKDYKNALQIFIKVRET------IQDAHVYV 805

Query: 674 NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL- 729
           N+ H+Y     F+ A++ Y+  L K     DA I+  L RT      AE+  D  K  L 
Sbjct: 806 NMGHIYAELRQFSKAIESYEIALSKEGKANDAGIISCLGRTWLNKGRAERNLDAYKMALD 865

Query: 730 ---RAIHLAPSNYTLRFD 744
              +A+ +AP     +F+
Sbjct: 866 QAKKAVAVAPDQLHFKFN 883


>gi|118394721|ref|XP_001029723.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89283985|gb|EAR82060.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1093

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 163/669 (24%), Positives = 294/669 (43%), Gaps = 91/669 (13%)

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
           D++++  +LGQA + F    YS +LE++K ALQ +P  PG  RLG+  C +   +   ++
Sbjct: 158 DKNDIIDILGQAQIFFFAKDYSKALEYFKEALQKNPKLPGRARLGLAYCFFMQKKFELSK 217

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 232
           +AFQR + LD    EA + LA++  Q  E       ++ + +A+E+     + L Y+A  
Sbjct: 218 RAFQRVIDLDKTVYEAYLGLAILAFQRKEWNVY---IQNLNKAYELNKSSPLVLYYIAEF 274

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPT------KSHSYYNLARSYHSKGDYE--KAGLYYM 284
           ++    +   +++   A+    + P       K  +Y    RS     D+   K+ LY M
Sbjct: 275 YYIQQDNVNTKKMAFQAINNLKNLPKILMDSDKLKTYVKQTRS-----DFYDIKSRLYQM 329

Query: 285 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN-----CETLKALGH 339
                             +G    +   +  A    E++    P+N      E  K L +
Sbjct: 330 ------------------IGSCFHREQQYDQAFRRLEEIRNQCPENEKELTFEFFKPLAY 371

Query: 340 IY--VQLGQIEKA-QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 396
           +   + LGQ ++  Q+   KA   +P+D +A ++    L   D   +L  FK A ++L +
Sbjct: 372 LQSKLALGQNKQTQQQYYLKALNYNPQDFEAQLEYANNLTDIDAHESLRYFKQALSVLNE 431

Query: 397 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
             E +  E+ NNIGV+      ++ A ++F+ A                  I  +    Q
Sbjct: 432 KKERINPEIYNNIGVLESHLKNYQKAIEAFEQA------------------IKLAVQSNQ 473

Query: 457 FKDMQLFHR-FENDGNHVELPWNK-----------VTVLFNLARLLEQIHDTVAASVLYR 504
              + +F + ++N+ N +E   +K            TV FN+A + E +     A  LY+
Sbjct: 474 EGGVNVFSKNYQNNTNEIETDQDKEESETKRKSFLCTVKFNMAAMYEDLKQNENAFSLYQ 533

Query: 505 LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL--KVNGKYPN-----ALSMLGDL 557
            +L     Y+D+Y+RLA +   + + Q +I+   EAL  K   K  N      L M G +
Sbjct: 534 EVLNICPYYLDSYVRLAYLEFKKGSFQNAIKYCEEALVKKDEAKSNNVRSDLVLCMKGYI 593

Query: 558 ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAAL--RNEKRAPKLEATHLEKA 615
             + DD   A+E F          D+Y+ L +   +Y   +  R+ + + K      EK 
Sbjct: 594 HSQYDDDQSAREAFNLIK-KQGFNDNYSKLFVYYMDYEQQIEKRDNQESQKKIMIIGEKI 652

Query: 616 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 675
           KE    ++    +N+ A     VVLAE GQ + +K++F  ++E  + SVF   P++  NL
Sbjct: 653 KE----ILGLDQTNIQALIVLAVVLAENGQINEAKEIFNSLKE--NISVF---PNILFNL 703

Query: 676 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 735
             + + + N+  A+  Y+    K     D  +L  +A  +   E++ + K  + + I   
Sbjct: 704 GQIQYLEKNYGEALMNYKKFQEKSSLVKDEYLLTQIALCNLHLEKYAEAKTQIKKLILRY 763

Query: 736 PSNYTLRFD 744
           PS+   R++
Sbjct: 764 PSSVVHRYN 772


>gi|262302939|gb|ACY44062.1| SH2 domain binding protein [Leiobunum verrucosum]
          Length = 169

 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 105/169 (62%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQAPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPKCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            YKL ++ KAR AF+RAL LD + V ALV LAV++L       IR G++ + +A+ I   
Sbjct: 61  FYKLNKIEKARMAFERALHLDSQCVGALVGLAVLELNLKTQESIRNGVQMLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
             M LN+LANHFFF   +  V  L   A   T +   ++ S Y LAR++
Sbjct: 121 NPMVLNHLANHFFFKKDYEKVRHLALHAFHNTENEAMRAESCYQLARAF 169


>gi|157812816|gb|ABV81153.1| putative CG2469-like protein [Antheraea paukstadtorum]
          Length = 173

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 108/173 (62%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +NVP+LLG+AC+ FNR  Y  +L FYK+AL+ +P  P A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGALAFYKKALRTNPDSPAALRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KL    KAR AF+RALQLDP+ V ALV L+++ L   E    +K +  + +A+ I P 
Sbjct: 61  FMKLNNQEKARMAFERALQLDPQCVGALVGLSILKLNLQENESNKKAVIMLSKAYAIDPK 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             M LN+LANHFFF   +  V+ L   A   T +   ++ S ++LAR++H++G
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEAMRAESCHHLARAFHAQG 173



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 312 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           D+R AL  ++K L   PD+   L+  +GH +++L   EKA+    +A ++DP+   A + 
Sbjct: 31  DYRGALAFYKKALRTNPDSPAALRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVG 90

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFE 420
           L  L ++       ++ K A  +L KA    P    VLN++    F K ++ 
Sbjct: 91  LSILKLNLQEN---ESNKKAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYN 139


>gi|157939601|gb|ABW05525.1| SH2 domain binding protein [Mastigoproctus giganteus]
          Length = 177

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 105/177 (59%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+LLG+AC  FN+  Y  +L FY +A + +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACXSFNKKDYXGALAFYXKAXRTNPXCPXAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            YKLG+  KAR AF+RAL LDP  V ALV  AV +L       I+ G Z + +A+ I   
Sbjct: 61  FYKLGKHDKARLAFERALHLDPXCVGALVGXAVXELNQKTPESIKNGXZMLSKAYXIEST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++  + DY++
Sbjct: 121 NPMVLNHLANHFFFKKXYXKVQHLALHAFHNTENEAMRAESCYQLARAFQVQEDYDQ 177


>gi|367008044|ref|XP_003688751.1| hypothetical protein TPHA_0P01590 [Tetrapisispora phaffii CBS 4417]
 gi|357527061|emb|CCE66317.1| hypothetical protein TPHA_0P01590 [Tetrapisispora phaffii CBS 4417]
          Length = 1077

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 202/853 (23%), Positives = 368/853 (43%), Gaps = 157/853 (18%)

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
           + N   LL +A + + +  YS SL F++  L ++P      R+GIG+C ++L     A +
Sbjct: 179 KTNCLFLLLRAKILYQKKNYSASLRFFQELLVLNPVLKPDPRIGIGMCFWQLKDHSMAVK 238

Query: 174 AFQRALQLDPENVEALVALAVMDLQ------ANEAAGIRKGMEKMQRAFEIYP---YCAM 224
           ++ RA ++DPEN  A + + + D         N+    ++  E +     +Y       +
Sbjct: 239 SWSRAKEIDPENKTASILVLLGDFHNSLTNSENDEQFKKQYSEAILNLENLYSGNKSNPV 298

Query: 225 ALNYLANHFFFTGQHFLVEQLTETAL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAG 280
            L  L ++F+F G++  V  + E  +    ++T +      S++  ARSY++  DY KA 
Sbjct: 299 ILTLLQSYFYFKGEYQSVIDIYEKKIMGMSSITANTILSEASFW-CARSYYALNDYRKAF 357

Query: 281 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
             +  S+K   K  + +   +GLGQ Q+K       +  FE + + + +  E    LG +
Sbjct: 358 TMFQESLK---KSEDNLLSKFGLGQTQIKNDLLEEGILTFENIYKSHENIQELNYILGLL 414

Query: 341 YVQ--------------LGQIEKAQELLRKAAKIDPRD------AQAFIDLGELL-ISSD 379
           Y +                 I KA + L K   +           +AF+ L +L  +   
Sbjct: 415 YARKCLDTKTEYSHKEHTKLISKAVQFLEKYISLTTSKKNQLVIPKAFLILSQLYELQVQ 474

Query: 380 TGAALDAFKTARTLLKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 438
              ALD        LK + E+ +PIE+LNNIG  +F  G+ E +                
Sbjct: 475 YKQALDILCRYLDDLKISNEKNIPIELLNNIGCFYFITGQKEKS---------------- 518

Query: 439 LDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA 498
                           L+F +M    + +  GN   L   ++T+ +N+AR  E+  D  A
Sbjct: 519 ----------------LEFFNMAK-EKLDLAGNDDSL---EITLQYNIARSSEE--DLAA 556

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL---VNEALKVNGKYPNALSMLG 555
            +++Y  IL K+  YV   +R       +N    S E+   VN+ L+ N           
Sbjct: 557 TNIVYSDILSKHPSYVHLKVRYLFTKFLQNKNSQSDEIEKEVNDLLQRNP---------A 607

Query: 556 DLELK---------------NDDWVKAKETFRAASDAT--------DGKDSYATLSLGNW 592
           DLE++               N D  K KE +R +  +T        +  D YA +SLGN+
Sbjct: 608 DLEVRALYTWFMKNGLKNSNNIDEAKYKE-YRNSEISTSKDTLTKYNSHDLYALISLGNF 666

Query: 593 NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 652
               A  N+K   K E ++L K  +LY + +     N++AA G  ++ AE  +   + ++
Sbjct: 667 YCVMAKENKKTPAKCEQSYL-KGIQLYQKALQIDPYNIFAAQGIAIIFAESKRLGAALEI 725

Query: 653 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYL 711
           + +++++      +   DV +N++H       +  A++ Y+  L+KF  Y+  A++   L
Sbjct: 726 WRKIRDS------LDTEDVHMNISHCLLEMREYVKAIEGYELILKKFPNYSKLAKVYNLL 779

Query: 712 ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAG--------VAMQKFSASTLQ----- 758
            +T YE    ++      +A+  A ++  L  ++         +A  KF+   L      
Sbjct: 780 GKTWYERGNKENSLSCYKKALQNAETSLKLEIESSNDLENSPKIASYKFNTVLLHFQIAE 839

Query: 759 ------KTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEK-KINTHVEYCKHLL 811
                    RT +++ S +  LENA+ +   L   S    + F  K +I   ++  +  +
Sbjct: 840 VVRRSGSKDRTVEDISSALTGLENALVLLKELKDKS----YKFIVKDEIEQRIQLGETTM 895

Query: 812 DAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEE---QKKYLLEKRKLEDEQKRL 868
             A + R   E+EE +        +Q    E+AR+  EE   ++K  +EK K E EQ ++
Sbjct: 896 KNA-LQRSLKEQEEYE-------LQQTGRLEQARKLIEENELKEKNRIEKEK-ELEQMKI 946

Query: 869 RQQEEHFQRVKEQ 881
            +Q+E F +++E+
Sbjct: 947 AKQKEEFAKLQEE 959


>gi|344299803|gb|EGW30156.1| hypothetical protein SPAPADRAFT_73543 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 1137

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 224/914 (24%), Positives = 393/914 (42%), Gaps = 146/914 (15%)

Query: 87   VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQ 145
            + +  LLL  G+ + A   F  +L  D++N  A LG+A V  N+ + YS +L+ Y++ L 
Sbjct: 174  LSQAVLLLFNGQDDDALDIFDKILRIDQNNCFATLGKAQVILNKTKNYSLALKLYQQVLI 233

Query: 146  VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQANEAA 203
            ++P      RLG+GLC + L     A  A++R L+LDPEN++A   + LA   L  N + 
Sbjct: 234  LNPLMKPDPRLGVGLCFWFLKDDKMALAAWERCLELDPENIKAKIFINLAKFHLAFNNSL 293

Query: 204  GIRKGMEKMQRAF-EIY------PYCAMALNYLANHFFFTGQHFLVEQLTETAL------ 250
               + +E  +    E+       P  A  L  LA+++F  G +  VE++ +  +      
Sbjct: 294  SDEEFLENYKTCLVEVSKINAKAPQDATVLLPLASYYFSKGDYETVEKIIKKIVYNITGD 353

Query: 251  -AVTNHGPTKSHSYYN----------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
              +T        S YN          L R   +  D+ +A  Y+  ++K +N  +  I  
Sbjct: 354  DNLTKFSNFTKISKYNSNILSQCCTWLGRIQFTNSDFLQASKYFQEAIK-LNDTN--IVA 410

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKAQELLRK 356
              GLGQ Q   G    A+  FE +L       E   +LG +Y +     + E A ++L +
Sbjct: 411  KLGLGQAQYNRGSIEEAIMTFESILRSNMKCLEVNYSLGILYSKQSSRRKQEMAIQILER 470

Query: 357  AAKI--------------------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 396
              ++                    +P    A++ L +L  SSD   +L+    A    K 
Sbjct: 471  YVRLSNNRGLSSSKEDSSEFLLNKEPICLNAYLTLSKLYESSDVNQSLNYLNKAIESRKH 530

Query: 397  AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
              + VP+EV NNIGV +F K  ++ A  +F+ AL                 +D +    +
Sbjct: 531  ISKPVPLEVYNNIGVFNFMKQNYDEASNNFQVALDQ---------------LDGA----E 571

Query: 457  FKDMQLFHRFENDGN-HVELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
            FK          DG+  ++LP + KV++ FNLAR  ++I +   A  +Y  +L +   Y 
Sbjct: 572  FKSP--------DGDLLIDLPQDLKVSLTFNLAR-SKEISNKDDALKIYETLLQECPHYF 622

Query: 515  DAYLRLAAI-----------AKARNNLQLSIELVNEALKVNGKYPNALSMLG-DLELKND 562
             A LR+  +            + +  L+  +   +  L++   Y   +   G  L L  D
Sbjct: 623  SAKLRILFLNCILEEGGYTKQEIKTELEALMSSNSSNLEIRSFYGWFIKNFGKKLGLPAD 682

Query: 563  -DWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTR 621
             D    K+T        D  D YA +SL N  Y    R+ K   +    +  +A EL+T+
Sbjct: 683  ADTKHQKDTLV----DYDSHDCYALISLANI-YCIMARDAKGDNEKRKKYYIRAIELFTK 737

Query: 622  VIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFA 681
            VI     N+YAA G  +   E  + +   D+  +++++ +         V++NL HV   
Sbjct: 738  VISVDPKNVYAAQGLAIANIENKESNKGLDILRKIRDSLND------ISVYLNLGHVLTE 791

Query: 682  QGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDC----KKSL------LRA 731
               +  A++ Y+  L +F    D++IL +L R  Y   Q ++     ++SL         
Sbjct: 792  LKQYGKAIENYELALGRFTDGKDSKILSFLGRAWYLRAQSENNLSFYRRSLEYSKLAFEC 851

Query: 732  IHLAPSNYTLRFD-AGVAMQKFSASTLQKT-RRTADEVRSTVAELENAVRVFSHLSAASN 789
            I    S  ++RF+ A V  Q     T Q   +R  +++ + +  L+  + + + L++   
Sbjct: 852  IKGTGSKSSIRFNIAYVHFQIAEFVTKQPVFQRKLEDIEAAITGLKEGIELLNELASD-- 909

Query: 790  LHLHGFDEKKINTHVEYCKHLLDA-------AKIHREAAEREEQQNRQRQEAARQAALAE 842
                  DEK    H  Y K  L A         ++R     EE +     E  ++  +A+
Sbjct: 910  ------DEK----HPPYPKEELRARANLGTTTLLNRLNVVFEETK-ASIAEVEQKLEVAK 958

Query: 843  EARRKAEEQKKYLLEKR--KLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
            + R++ EE K    ++R   L++++++L Q+    Q   +QW      +   +  ENDDD
Sbjct: 959  KLRQEEEEAKLEEEKQRVAALKEKEEKLAQERALLQEQAQQWAEEARMNVEVDE-ENDDD 1017

Query: 901  ----EVGHSEKRRR 910
                E   ++K+R+
Sbjct: 1018 LFNEESAAADKKRK 1031


>gi|358398556|gb|EHK47907.1| hypothetical protein TRIATDRAFT_46734 [Trichoderma atroviride IMI
            206040]
          Length = 1200

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 227/972 (23%), Positives = 403/972 (41%), Gaps = 173/972 (17%)

Query: 56   TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL-----------------AKGE 98
            ++ + KE +  LAT   N A+R++      ++ +G LLL                  KGE
Sbjct: 139  SETKTKEHYLQLATSSLNDAARLNPSFSPIFLARGVLLLLRASLQGPSKTAGSLGTEKGE 198

Query: 99   V-EQASSAFKIVLEADR-DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IR 155
            + + A+ AF   L   +  NV AL+G+A   F+  +Y ++L  Y+  LQ  P       R
Sbjct: 199  LLKNAAKAFDDALRVSQGKNVLALMGKARTLFSMHKYPEALAAYQDVLQKRPDLVDPDPR 258

Query: 156  LGIGLCRYKLGQLGKARQAFQRALQLDPEN--VEALVALAVMDLQANEAAGI-------- 205
            +GIG C ++LG    A+ A++R L+++P++   ++L+ L  +D   +             
Sbjct: 259  IGIGCCFWQLGFKDDAKVAWERCLEINPDSKVPKSLLGLYYLDASGHVPVNSPEFPQLYK 318

Query: 206  RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
            R  ++ +Q +F++     +  +  A++F         ++L   A+  T+     S  +Y 
Sbjct: 319  RAMIDYIQDSFKLDKDVPITCSTFASYFLSRKMWDKADKLAHKAIQYTDVNAVASDGWYL 378

Query: 266  LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVL 324
            LAR  H  GD E+A  YY  +            P  +G+ Q+ +   D   A    EK++
Sbjct: 379  LARKAHYNGDLERASDYYRRADDARGGTETGYLPAKFGVAQLSVLKNDLGEAKLRLEKII 438

Query: 325  EIYPDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR---- 363
            +    N E +  LG IY +                +++KA  LL   R + K DP+    
Sbjct: 439  Q-QSKNHEAMILLGIIYAEEIFANQSSDIKEDRSAEMKKAVALLEGVRNSWK-DPKKALS 496

Query: 364  -DAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGE-----EVPI------------- 403
             D    ++L  L  +     AL   +    L +++  E     +VP              
Sbjct: 497  PDPSVLLNLARLYETDSPDKALQCLQQVEQLEIEQIPESEHPTDVPASELQAALRKFLSP 556

Query: 404  EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
            ++LNNIG  H +  + + A + F+ AL        + +  K   +D  A +         
Sbjct: 557  QLLNNIGCFHSQAEKHDLASELFEAALS-----ACMRAGEKDPTMDTDALV--------- 602

Query: 464  HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 523
                             T+ FNL R  E    T  A  +Y  +L ++ DY DA  RLA I
Sbjct: 603  ----------------TTISFNLGRSYEARGLTDKAVEVYEGLLNRHDDYTDARTRLAYI 646

Query: 524  AKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLEL--------------KNDDW 564
             K R N              N + P+A++ L      DLE+              K    
Sbjct: 647  -KLRKN-------------PNKEGPDAVAKLYQENTADLEVRALYGWYLGKVHSRKRPAN 692

Query: 565  VKAKETFRAASDAT---DGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHLE-KAKEL 618
            ++    FR         D  D YA + +GN     A  +R E    K + + +  KA E 
Sbjct: 693  IQEDHEFRHYKHTLQNYDKHDRYALVGMGNLYLLQAREMRRETEPEKQKRSAIYCKAVEF 752

Query: 619  YTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
            + + +     N YAA G  + L E +     +  +F +V++    S       +++NL H
Sbjct: 753  FEKALSLDPKNAYAAQGIAIALVEDRKDLKTALTIFNKVRDTVKDS------HLYVNLGH 806

Query: 678  VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY-------EAEQWQDCKKSLLR 730
            ++     F  A++ Y+  L K   + D  IL  L RT         + + +    +   +
Sbjct: 807  IFAELKQFTKAIEHYEIALSKDGKSNDPVILSCLGRTWLNRGRADRDVDSYNKALECAKK 866

Query: 731  AIHLAPSNYTLRFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSAAS 788
            A+ +AP     +F+ A V +Q  +   TL ++RRTA+++      LE A+     ++A  
Sbjct: 867  ALEVAPDQIHYKFNVAFVQIQLVTTIQTLPESRRTAEQLEEASEGLEAAIESLDMIAAHP 926

Query: 789  NLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAERE-EQQNRQRQEAARQAALAEEARR 846
                   D E++ N      +  L+ A       ++E E++N ++  AA++   AE  +R
Sbjct: 927  QTPYPKHDVEQRANMARNTLRKQLERAL----GKQKEWEEKNMEKIVAAKEQREAEIKKR 982

Query: 847  KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSEND---DDEVG 903
              EE+++ +L+K +  + Q+++R++ E     +++  +   A + R R E +   D+E G
Sbjct: 983  --EEERQAVLDKER--ERQEKIRKEREAIA-ARDRLHAEQRAEEERVRHEAEMTTDEETG 1037

Query: 904  HSEKRRRKGGKR 915
               KR+RK   R
Sbjct: 1038 EKVKRKRKPAPR 1049


>gi|401882690|gb|EJT46937.1| Pol II transcription elongation factor [Trichosporon asahii var.
           asahii CBS 2479]
          Length = 1147

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 220/945 (23%), Positives = 387/945 (40%), Gaps = 154/945 (16%)

Query: 4   EYFKQGKVEQFRQILEEG-----SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ 58
           E+++ G+ E+  Q+L  G     S   +D       Y   A+L  L + +          
Sbjct: 58  EHWRAGRFERAEQVLLSGIKFFGSGGHVDSVALSNLY---AMLAHLHLAWARTAPTVVLS 114

Query: 59  REKEEHFILATQYYNKA--------SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           + K  H+  AT + N+A        +  D    S  +GK  L  A+G+   A+   + +L
Sbjct: 115 QAKS-HYSEATAHLNRADEAMRSSGANPDEEPVSLSMGKIILYSARGQQGTAAPLVERLL 173

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           +   DN+PAL  QA ++F R     +L  Y++ L ++P+     R+GIGLC + LG   +
Sbjct: 174 QRQPDNLPALAAQARLQFARRETGAALVTYQKILALNPNAQPDPRIGIGLCAWTLGDRVR 233

Query: 171 ARQAFQRALQLDPENVEALVALAVMDL----QANEAAGIR-----KGMEKMQRAFEIYPY 221
           A  A+ RAL+LDP +  A + LA+ +L    + N     R     +G+   Q AF++   
Sbjct: 234 ATMAWDRALELDPSSWAARLMLALANLNMAREPNHPMDKRLTYESEGVSHAQNAFKLNNK 293

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
              A   L+      G   L  +L E A+   ++      S     R     GD   AG+
Sbjct: 294 STAASLVLSGVAALGGHIELASKLAERAIQYADNKRHVVMSNSERGRLGFVAGDVADAGV 353

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY----PDNCETLKAL 337
           Y +A+ K  ++ +  +     L Q+ +K G+ R AL   E+  +      P     L A 
Sbjct: 354 Y-IAAAKGADQQNVNMMAELTLAQIAIKNGNLREALNFVEQTAKRLNGKPPLEFTVLHAS 412

Query: 338 GHIYVQLGQ---------------IEKAQELLRKA------AKID--PRDAQAFIDLGEL 374
              Y  LG                +   Q+L+  A      AK+     D+  F++L +L
Sbjct: 413 LLAYPHLGMPADELARNRVTARDMLSGIQDLVSNADSDEDWAKLRGIAADSDTFVELAKL 472

Query: 375 LISSDTGAALDAFKTARTLLKKAGEE------------VPIEVLNNIGVIHFEKGEFESA 422
                   A+++++TA ++     EE              I++  N+  ++  +G  E+A
Sbjct: 473 WQEESVDKAINSYQTAISIKADLEEEDTATQETKPVDYSEIKLKANLAALYALQGHTENA 532

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
              F+DAL            TK    +A A                          K  +
Sbjct: 533 EAMFQDAL---------SKLTKESGPEADAM-------------------------KTVL 558

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA-------KARNNLQLSIE 535
            ++L R  EQ  D V A   YR +L ++ +++++ +RLA +A       +A N L+  + 
Sbjct: 559 AYDLGRAFEQGGDIVNAQKWYRDVLHQHPEHMESKVRLAHLATIAGRNVEAHNYLKECLR 618

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF 595
             +  L +   Y N L  +G          K    F + +   D  D Y   +LG W ++
Sbjct: 619 ADDSNLTLRSVYTNFLIGIGSF--------KEALNFTSHTLRLDKTDPYTFTALG-WLHY 669

Query: 596 AALRNEKRAPKL--EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD------ 647
              R  K    +        ++ E Y R +    +N  AA G  + LAE           
Sbjct: 670 TLGREAKSQQDVAERPKQYLRSAEAYERALSLDPTNAVAAQGLAIALAENTLVPKNLQPA 729

Query: 648 --VSKDLFTQVQEAASG-SVFVQMPD------VWINLAHVYFAQGNFALAMKMYQNCLRK 698
              ++D+ T+ + A +  SV  ++ D      V +N+ H YF +G    A++ Y + L  
Sbjct: 730 PGSAEDVKTRTRLAGNALSVLGRIKDSLPEGPVSVNIGHCYFLRGEEQRAIEAYGSALNS 789

Query: 699 FYYNTDAQILLYLARTHYEAEQWQDCKKSL-------LRAIHLAPSNYTLRFDAGVAMQK 751
            Y   +  +LLYL R  +     +    ++        +A+H+ PS+  + ++ G+ +Q 
Sbjct: 790 -YGGHNVSVLLYLCRAWFTYATKESNVSAMSQALSYATQALHIQPSDRAILYNIGLILQN 848

Query: 752 FSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKH 809
            +     L+ ++RT +E+  T+   E A  +F  L+      L  +D    +   ++   
Sbjct: 849 AATIMLDLEPSKRTLEELTHTLKRAEEAASIFRSLADDKAGPL-AYDRNMADQRAKFLDS 907

Query: 810 LLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR-KAEEQKK 853
           +     + R  AE ++Q+  + + AAR     EEARR +AEEQ +
Sbjct: 908 I-----VSRGQAEVKKQEAYEAEFAAR----VEEARRVRAEEQAR 943


>gi|353238582|emb|CCA70524.1| related to RNA polymerase II-associated protein-Laccaria bicolor
           [Piriformospora indica DSM 11827]
          Length = 1125

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 192/856 (22%), Positives = 357/856 (41%), Gaps = 155/856 (18%)

Query: 99  VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
           +  A   F+ +L+    N+ AL G+A + + + +Y ++L+ Y+R L++ P+     R+GI
Sbjct: 169 INDALVTFEGILQGTPTNIVALHGKARIMYMQRKYREALQLYQRILRLSPNAQPDPRIGI 228

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA---------GIRKGM 209
           GLC ++L    KA++A++R+L+L P +    + L +  L A++ +             G 
Sbjct: 229 GLCFWQLDDRSKAKKAWERSLELHPNHWVPQLLLGLESLNASKDSQRTEEQRHHAYTVGS 288

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           + ++RAF I        N L+ +F   G+     +L E ++   +     S  +    R 
Sbjct: 289 KHIERAFHINQKNGATANCLSEYFIRRGEARKALKLAERSIQYADSITILSEGHLRAGRV 348

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
            H +G Y+ A  +Y  +    N P   I    G+ Q  +K G+  +A+   + +L   P+
Sbjct: 349 AHLEGRYDDAITHYTNAK---NLPLASI----GIAQCHIKRGETAAAIHVLDTLLN-GPE 400

Query: 330 NCETLKALGHI------------YVQLGQIE-KAQELLRKAAK---------------ID 361
             +  +A+  +              +L Q + KA+ELL +  +               ++
Sbjct: 401 TQQPKEAMIMLASLRAFERPALSSAELAQDKAKARELLERVKRHTSQANGTKSNGISAVN 460

Query: 362 PR------DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 415
            R      D +  +++G L    DT  AL A++ AR + +++       ++NNI V+   
Sbjct: 461 NRKPAWMNDLEMHVEIGRLWEREDTAKALLAYQDARRISEQSVAGADPRIINNIAVLGHL 520

Query: 416 KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 475
            G+   A   +++ALG      +L +K                            NH  +
Sbjct: 521 SGKIAEARALYEEALG------ILANKW--------------------------ANHENM 548

Query: 476 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
                T+L+NLAR+ E   +T  A   Y  +L ++ +YVDA +RLA +  A N    +  
Sbjct: 549 DGMSTTILYNLARVYEDQDETALAKDAYDKLLGRHPEYVDAKVRLAHMLLASNKPNEAHT 608

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF 595
           ++ +A++      N  +      L   + ++A      A+   +  D Y T++ G W ++
Sbjct: 609 ILKQAIETQQTNMNLRAYYTHF-LTQSNLLQAALKIVHATLNINKNDLYGTVASG-WLHY 666

Query: 596 AALRNEKRAPKLEATHLEK------AKELYTRVIVQHTSNLYAANGAGVVLAE------- 642
              R  +  P  E T  ++      A E Y R +    S   AA G  +++AE       
Sbjct: 667 QLGREAR--PNNEETMRDRRHKLLYAAEFYERALNLDPSCSVAAQGLAILIAEDAIGMMA 724

Query: 643 ----KGQFDVSKDL---------FTQVQEA-ASGSVFVQMPDVWINLAHVYFAQGNFALA 688
                G  D    L         F +++E  A GSV+        N+ H Y+ +  +  A
Sbjct: 725 LKPGAGLEDHETRLANTSDALEYFARIREVMADGSVYT-------NMGHCYYMRDEYERA 777

Query: 689 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA-------PSNYTL 741
           ++ Y+  L+KFY   +  +++ L+R  Y          ++  A+HLA       P + ++
Sbjct: 778 IESYETGLQKFYNGQNTSVMMCLSRAWYAKATRDQSFVAMKTALHLAQTAQMLSPGDKSI 837

Query: 742 RFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKK 799
           +++  V  Q+ +    +L  ++RT +E++  +    NA R    LS  ++     +D+  
Sbjct: 838 KYNIAVIEQRAAEMVFSLPVSKRTLEELQEALDLATNAQRFLFELSEDTSKGGLPYDKDM 897

Query: 800 INTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAAR----------------------- 836
            +    Y   LL          +  E+++  + EAAR                       
Sbjct: 898 ASQRHRYLGSLLRKGTEQISQQQEYEKEHHAKLEAARAFRMAEKAAAEAKEKARLEELQR 957

Query: 837 -QAALAEEARRKAEEQ 851
             AALAEE RRKA E+
Sbjct: 958 EAAALAEE-RRKAREE 972


>gi|406700720|gb|EKD03885.1| Pol II transcription elongation factor [Trichosporon asahii var.
           asahii CBS 8904]
          Length = 1147

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 218/945 (23%), Positives = 390/945 (41%), Gaps = 154/945 (16%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVY-YTYLGKIETKQ---- 58
           E+++ G+ E+  Q+L  G    I  + +    + +A+ N   +  + +L    T      
Sbjct: 58  EHWRAGRFERAEQVLLSG----IKFFGSGGHVDSVALSNLHAMLAHLHLAWARTAPTVVL 113

Query: 59  REKEEHFILATQYYNKA--------SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
            + + H+  AT + N+A        +  D    S  +GK  L  A+G+   A+   + +L
Sbjct: 114 SQAKSHYSEATAHLNRADEAMRSSGANPDEEPVSLSMGKIILYSARGQQGTAAPLVERLL 173

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           +   DN+PAL  QA ++F R     +L  Y++ L ++P+     R+GIGLC + LG   +
Sbjct: 174 QRQPDNLPALAAQARLQFARRETGAALVTYQKILALNPNAQPDPRIGIGLCAWTLGDRVR 233

Query: 171 ARQAFQRALQLDPENVEALVALAVMDL----QANEAAGIR-----KGMEKMQRAFEIYPY 221
           A  A+ RAL+LDP +  A + LA+ +L    + N     R     +G+   Q AF++   
Sbjct: 234 ATMAWDRALELDPSSWAARLMLALANLNMAREPNHPMDKRLTYESEGVSHAQNAFKLNNK 293

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
              A   L+      G   L  +L E A+   ++      S     R     GD   AG+
Sbjct: 294 STAASLVLSGVAALGGHIELASKLAERAIQYADNKRHVVMSNSERGRLGFVAGDVADAGV 353

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY----PDNCETLKAL 337
           Y +A+ K  ++ +  +     L Q+ +K G+ R AL   E+  +      P     L A 
Sbjct: 354 Y-IAAAKGADQQNVNMMAELTLAQIAIKNGNLREALNFVEQTAKRLNGKPPLEFTVLHAS 412

Query: 338 GHIYVQLGQ---------------IEKAQELLRKA------AKID--PRDAQAFIDLGEL 374
              Y  LG                +   Q+L+  A      AK+     D+  F++L +L
Sbjct: 413 LLAYPHLGMPADELARNRVTARDMLSGIQDLVSNADSDEDWAKLRGIAADSDTFVELAKL 472

Query: 375 LISSDTGAALDAFKTARTLLKKAGEE------------VPIEVLNNIGVIHFEKGEFESA 422
                   A+++++TA ++     EE              I++  N+  ++  +G  E+A
Sbjct: 473 WQEESVDKAINSYQTAISIKADLEEEDTATQETKPVDYSEIKLKANLAALYALQGHTENA 532

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
              F+DAL            TK    +A A                          K  +
Sbjct: 533 EAMFQDAL---------SKLTKESGPEADAM-------------------------KTVL 558

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA-------KARNNLQLSIE 535
            ++L R  EQ  D V A   YR +L ++ +++++ +RLA +A       +A N L+  + 
Sbjct: 559 AYDLGRAFEQGGDIVNAQKWYRDVLHQHPEHMESKVRLAHLATIAGRNVEAHNYLKECLR 618

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF 595
             +  L +   Y N L  +G          K    F + +   D  D Y   +LG W ++
Sbjct: 619 ADDSNLTLRSVYTNFLIGIGSF--------KEALNFTSHTLRLDKTDPYTFTALG-WLHY 669

Query: 596 AALRNEKRAPKL--EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD------ 647
              R  K    +        ++ E Y R +    +N  AA G  + LAE           
Sbjct: 670 TLGREAKSQQDVAERPKQYLRSAEAYERALSLDPTNAVAAQGLAIALAENTLVPKNLQPA 729

Query: 648 --VSKDLFTQVQEAASG-SVFVQMPD------VWINLAHVYFAQGNFALAMKMYQNCLRK 698
              ++D+ T+ + A +  SV  ++ D      V +N+ H YF +G    A++ Y + L  
Sbjct: 730 PGSAEDVKTRTRLAGNALSVLGRIKDSLPEGPVSVNIGHCYFLRGEEQRAIEAYGSALNS 789

Query: 699 FYYNTDAQILLYLARTHYEAEQWQDCKKSL-------LRAIHLAPSNYTLRFDAGVAMQK 751
            Y   +  +LLYL R  +     +    ++        +A+H+ PS+  + ++ G+ +Q 
Sbjct: 790 -YGGHNVSVLLYLCRAWFTYATKESNVSAMSQALSYATQALHIQPSDRAILYNIGLILQN 848

Query: 752 FSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKH 809
            +     L+ ++RT +E+  T+   E A  +F  L+      L  +D    +   ++   
Sbjct: 849 AATIMLDLEPSKRTLEELTHTLKRAEEAASIFRSLADDKAGPL-AYDRNMADQRAKFLDS 907

Query: 810 LLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR-KAEEQKK 853
           +     + R  AE ++Q+  + + AAR     EEARR +AEEQ +
Sbjct: 908 I-----VSRGQAEVKKQEAYEAEFAAR----VEEARRVRAEEQAR 943


>gi|157812818|gb|ABV81154.1| putative CG2469-like protein [Cydia pomonella]
          Length = 173

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 107/173 (61%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +NVP+LLG+AC+ FNR  Y  +L FYK+AL+ +P  P A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGALAFYKKALRTNPDSPAALRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KL    KAR AF+RALQLDP+ V ALV L+++ L   E    +  +  + +A+ I P 
Sbjct: 61  FMKLNNQEKARMAFERALQLDPQCVGALVGLSILKLNLQENESNKMAVIMLSKAYAIDPK 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             M LN+LANHFFF   +  V+ L   A   T +   ++ S ++LAR++H++G
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCHHLARAFHAQG 173



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 312 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           D+R AL  ++K L   PD+   L+  +GH +++L   EKA+    +A ++DP+   A + 
Sbjct: 31  DYRGALAFYKKALRTNPDSPAALRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVG 90

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFE 420
           L  L ++       ++ K A  +L KA    P    VLN++    F K ++ 
Sbjct: 91  LSILKLNLQEN---ESNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYS 139


>gi|425766561|gb|EKV05167.1| RNA polymerase II transcription elongation factor (Ctr9), putative
           [Penicillium digitatum PHI26]
 gi|425781714|gb|EKV19661.1| RNA polymerase II transcription elongation factor (Ctr9), putative
           [Penicillium digitatum Pd1]
          Length = 1191

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 202/839 (24%), Positives = 333/839 (39%), Gaps = 148/839 (17%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 134 GELYSEAKTKDHYLQLATSTLNEASRLNPAYPPLFLARGVLCLLRASLYPPRAVRPGAID 193

Query: 99  ----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
               VE    A K   E+ +     N+ A+LG+A   +  GRY+D+LE Y++AL   P+ 
Sbjct: 194 TSERVESLRQALKCFDESSKAFGGRNIMAILGRARAHYMLGRYADALEGYQKALIKMPNL 253

Query: 151 PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
                R+G+G C ++LG   +A+ A++R+L L+PE+  A V LAV  L  +        M
Sbjct: 254 TDPDPRIGLGCCLWQLGFKDQAKIAWERSLYLNPESKVANVLLAVYYLHDSSRRATTDPM 313

Query: 210 ----------EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
                     +  Q+AF++     M  +  A++F     +  VE L   A+  T+     
Sbjct: 314 FGSMYKLAMTQYTQKAFKLDKEYPMTCSMFASYFLLRKSYPTVETLARRAIEHTDVMSIA 373

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
           S  +Y L R  H +GD   A  +Y  S +      +   P  +G  Q+Q+   DF  A  
Sbjct: 374 SDGWYLLGRKSHYEGDDALATEFYNRSDQARGGVDKGYLPAKFGAVQMQITNKDFDGAKF 433

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRKA------- 357
             EK++++   N E +  L  I+ +                + ++A  LL          
Sbjct: 434 RLEKIIQL-SKNPEAMTLLAAIHAEEVFAAQKSGSKEDKSTEAKRAITLLESVRCMWKDE 492

Query: 358 -AKIDP------------------RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 398
              I P                  +  Q    L ++ I    G A    +    L     
Sbjct: 493 KLNISPDESVLVYLSRLYEGTAPDKSMQCLTQLEQIQIGEIPGDARPDIEDQDELNAALR 552

Query: 399 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
           E +P ++LNN+G   ++  +   A   F+ AL        + SK K    D  A +    
Sbjct: 553 ESLPPQLLNNMGCFLYQNEKIALARGLFQSALN-----ACVQSKEKEDGTDTDALV---- 603

Query: 459 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                                 T+ +NL R  E       A  +Y  +L ++ DY +A  
Sbjct: 604 ---------------------TTISYNLGRTYEAADMWDEAKKVYEGLLERHADYTEANA 642

Query: 519 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAASDA 577
           RL  IA       L     +E  K  GK   A S   +LE+++   W  +K   R A+ A
Sbjct: 643 RLTYIA-------LRQSPTDEGPKKIGKLYEADST--NLEVRSLYGWYLSKAKKRVANLA 693

Query: 578 TDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELY 619
            D +              D YA   +GN +  AA R+ +R    E        ++A E +
Sbjct: 694 EDSEQRHFKHTLQYYDKHDRYALTGMGNVHLLAA-RDMRRDTDQEKEKRRKIYQRAVEFF 752

Query: 620 TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 679
            + +     N YAA G  + L      D  KD  + VQ  +     ++ P V++NL HV+
Sbjct: 753 DKALQLDPKNAYAAQGIAIAL-----IDDKKDHSSAVQILSKIRDTIKDPSVYLNLGHVF 807

Query: 680 FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAI 732
                F+ +++ Y+  L K     D QIL  L R  +   + E      K+ L    RA 
Sbjct: 808 AELRQFSRSIEHYEAALSKD-RQRDVQILACLGRVWWLRGKQEANLAAMKTALDYATRAR 866

Query: 733 HLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
            ++P    L+F+      + +  A  LQ T++T  +V+     L+ A+  F  LS   N
Sbjct: 867 DVSPDQLHLQFNVAFVQNQIASLAYGLQPTQKTLQDVQEAAEGLKEAIETFERLSKEKN 925


>gi|157939593|gb|ABW05521.1| SH2 domain binding protein [Forficula auricularia]
          Length = 177

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 108/177 (61%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+P+L G+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLXGKACIAFNKKDYXGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
               G   KA  AF+RAL LD + V ALV L+++ L   E+  I+ G++ + +A+ I   
Sbjct: 61  FXXXGNQEKAXXAFERALSLDSQCVGALVGLSILKLNQXESDSIKTGVQMLSKAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLXLHAFHNTENEXMRAESCYXLARAFHVQEDYDQ 177


>gi|189190482|ref|XP_001931580.1| tetratricopeptide repeat protein 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973186|gb|EDU40685.1| tetratricopeptide repeat protein 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 1170

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 212/872 (24%), Positives = 348/872 (39%), Gaps = 178/872 (20%)

Query: 37  RIAILNALGVYYTYLGKIETKQREKE------EHFIL--ATQYYNKASRIDMHEPSTWVG 88
           R++ILN  G+ + YL K     R K       + F +  AT   N ASRI    P  ++ 
Sbjct: 109 RLSILN--GLCWLYLQKCREAPRVKPHGDTKLKDFWIQSATGVLNDASRISPSHPPLFLA 166

Query: 89  KGQLLLAKGEVE-------------------QASSAFKIVLEADRD-NVPALLGQACVEF 128
           +G L L K  ++                   QA+  F+  L A    N+ A +G+A V +
Sbjct: 167 RGVLYLLKASLQGPATAAGSTVSPERMETLKQAAKCFEDALRASGGRNLMAKMGKARVNY 226

Query: 129 NRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
           + G+++D+L+ Y+  L+  P    P   R+GIG C ++LG   +A  A+QR+L+L+P++ 
Sbjct: 227 SMGKWADALKGYQNILESSPDLLDPDP-RIGIGCCFWQLGHKDEAATAWQRSLELNPKSK 285

Query: 187 EALVALAVMDLQANE---------AAGIRKGM-EKMQRAFEI---YPY-CAMALNYLANH 232
            AL+ L + + Q            AA I+K   E +Q A ++   YP  CA    YL   
Sbjct: 286 IALILLGIYNFQLTANLSTADPKFAALIKKATGEYIQPALKLDNQYPLSCATVGTYL--- 342

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
                     E +   A+ +T+     S  +Y  A+  H + +   A  YY  S +    
Sbjct: 343 -ILRKDLGKTEDVARRAIELTDTNAIASDGWYLRAKIAHQQENTTLAAEYYSKSDQARGG 401

Query: 293 PHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIE 348
                 P  +GL Q+ + + ++  A    EK+L+  P N E    LG +Y +     Q  
Sbjct: 402 EERGYIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-NVEAQTLLGTLYAEDVFAAQNS 460

Query: 349 KAQE----LLRKAAKI---------DPR-----DAQAFIDLGELLISSDTGAALDAFKTA 390
           K+ E     LRKA K          DP+     D    ++L  L  +     +L   +  
Sbjct: 461 KSTEDKSAELRKALKYLESVQNAWKDPKKKVIPDQSVLLNLARLYETDHPEKSLKCLEEV 520

Query: 391 RTL-LKKAGEEVPIEVL-------------------NNIGVIHFEKGEFESAHQSFKDAL 430
             + +    EE   E L                   NN+G   F+   +  A + F+ AL
Sbjct: 521 EQMEIDAIPEEDYPEGLEEGAELKAALRQLLPPQLLNNMGCFQFQAERYVRAQELFQVAL 580

Query: 431 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
                   ++++ +   ID  A +                          ++ FNLAR  
Sbjct: 581 N-----ACVNAENRDNTIDTDALV-------------------------TSISFNLARTY 610

Query: 491 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
           E   +   A  +Y  +L ++ DYVDA +RL  IA   +        + +  K N      
Sbjct: 611 EAEGEPEEAKKVYNSLLQRHPDYVDARIRLTYIALKEHPQDEGPRAMKDLFKENEDNVEV 670

Query: 551 LSMLGDLELKNDDWVKAKETFRAASDA--------------TDGKDSYATLSLGNWNYFA 596
            ++ G        W   K   R  + A              +D  D Y+ + +GN  + A
Sbjct: 671 RALYG--------WYVNKSKKRTQNFAADEEQRLYKHTLQKSDKHDRYSLMGMGNI-HLA 721

Query: 597 ALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKD 651
             R   R+ + +        E+A E + +V+     N YAA G  + L E K  +  +  
Sbjct: 722 IAREMPRSSEQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIALVEDKKDYSTALQ 781

Query: 652 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYL 711
           +FT+V+E       ++   V++NL H Y     +A A++ Y+  L K  +N + +IL  L
Sbjct: 782 IFTKVKET------LKDHSVYVNLGHTYCEIKQYARAIENYEAALSKNQHN-NPKILACL 834

Query: 712 ARTHYEAEQWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST----L 757
            RT Y   + +          D  K  L+A   APS+   +F+  VA  +F  +T    L
Sbjct: 835 GRTWYLRARHERSVAGIRTALDYSKQALKA---APSDLNSQFN--VAFVQFQIATMVYSL 889

Query: 758 QKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
            + +RT  EV      L  A+     L+   N
Sbjct: 890 PEQQRTLQEVDEAATGLTEAIEALEKLAKEEN 921


>gi|429857169|gb|ELA32048.1| RNA polymerase ii transcription elongation factor [Colletotrichum
            gloeosporioides Nara gc5]
          Length = 1211

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 246/1058 (23%), Positives = 425/1058 (40%), Gaps = 194/1058 (18%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
            Y KQ K++   ++L  G +   D    +   E++++++ L   Y +           G++
Sbjct: 79   YAKQKKIDHAIEMLVRGGNAMRD----NGPKEKLSMISCLCWMYLWKSREAPRLPPDGEL 134

Query: 55   ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 114
             ++ + KE +  LAT   N ASRI+   P  ++ +G L L K  ++   +A    ++++R
Sbjct: 135  ASEAKTKEYYLQLATSTLNDASRINPAFPPLFLARGVLQLLKASLQTPKTAGHGQVDSER 194

Query: 115  --------------------DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGA 153
                                 N+ A++G+A   F+ G+Y +SL  Y+  LQ  P      
Sbjct: 195  ADLLRSALKAFEDAIRVSGGKNMLAMMGKARTFFSLGKYPESLACYQDVLQKMPDFVDPD 254

Query: 154  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR- 206
             R+GIG C ++LG    A+ A++R+L+++P++    + L +  L A      N    +R 
Sbjct: 255  PRIGIGCCFWQLGFKDDAKLAWERSLEINPDHKVGNILLGLYYLDASGHIPTNSPDFLRL 314

Query: 207  --KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
              K M E  Q++F++     +     A +F    Q   V+ L   A+  T+     S  +
Sbjct: 315  YKKAMTEYTQKSFKLDKNMPLTCATFAGYFLSRKQLPTVDSLAHKAIQYTDVNAIASDGW 374

Query: 264  YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEK 322
            Y LAR  H  GD ++A  +Y  +            P  +G  Q+ +  GD   A    EK
Sbjct: 375  YLLARKEHYTGDPDRASDFYRRADDARGGSERGYLPAKFGAAQLAVLRGDLGEAKLRLEK 434

Query: 323  VLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKID 361
            +++    + E +  LG +Y +                     +G +E  +   + + K  
Sbjct: 435  IIQQSKSH-EAMILLGTLYAEEVFANQDADGKEDKSAEMKKAIGLLEGVRGAWKDSKKSM 493

Query: 362  PRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE-------------------V 401
              DA   ++L  L  +     A         L L++  EE                   +
Sbjct: 494  SPDAAVLLNLARLYETEYPDKAQQCLLQVEQLELEQVPEEEQPKDIEDEAEKRAALRKFL 553

Query: 402  PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
            P ++LNNIG  + +    E A + F+ ALG  + +   DS+     ID  A +       
Sbjct: 554  PPQLLNNIGCFYSQSERHEQASEMFEAALGACMKIGEKDSE-----IDTDALV------- 601

Query: 462  LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                               T+ FNL R  E       A  +Y  +L ++ DY DA  RLA
Sbjct: 602  ------------------TTISFNLGRSYESRGLLDEAIEVYDGLLKRHDDYTDARTRLA 643

Query: 522  AIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAK------- 568
             I K R N              N + P+A++ L      DLE++    W   K       
Sbjct: 644  YI-KLRKN-------------PNKEGPDAVAKLYQENPQDLEVRALYGWYMGKVHSRKRP 689

Query: 569  ---------ETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRA--PKLEATHLEKA 615
                       ++      D  D YA + +GN     A  +R E  +   K  AT+  KA
Sbjct: 690  HNINEDHEFRHYKHTLQNYDKHDRYALVGMGNLYLIQAREMRRESDSDRAKRSATY-SKA 748

Query: 616  KELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWIN 674
             E + + +     N YAA G  + L E K  +  +  +F ++++       ++   V++N
Sbjct: 749  VEFFEKALSLDPRNAYAAQGIAIALVEDKKDYKTALGIFVKIRDT------IKDAHVYVN 802

Query: 675  LAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL-- 729
            L H+Y     +  A++ Y+  L K   + D  IL  L RT      +E+  D  +  L  
Sbjct: 803  LGHIYAELRQWTKAIENYETALSKEGKSNDPVILACLGRTWLNKGRSERDLDAYRQSLEY 862

Query: 730  --RAIHLAPSNYTLRFDAGVAMQKFSAST----LQKTRRTADEVRSTVAELENAVRVFSH 783
              +A+  AP     +F+  VA  +   +T    L + +RT  +++   A LE A+     
Sbjct: 863  AKKALEAAPDQVHYKFN--VAFVRIQMATMVYALSENQRTVAQLQDAAAGLEAAISALDE 920

Query: 784  LSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQA--AL 840
            ++          D E++ N      +  L+ A   ++  E + ++  Q     RQA    
Sbjct: 921  IAGHPQTPYPKHDVEQRANMARNTQRKQLERAIASQKEYEEKNKEKLQAALEQRQAELRR 980

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDD 900
             EE R+KA E+++   EK K E E+   R +E   +R +E          R+E     D+
Sbjct: 981  REEERQKALEKEREKQEKIKREREEIAARDREIAERRAEED-------KARQEAEMTTDE 1033

Query: 901  EVGHSEKRRRKG-----GKRRKKDKSSRSHYETEYAEA 933
            E G   KR++K      G+ R K  S +   ET+  E+
Sbjct: 1034 ETGEKVKRKKKPAPRGDGESRPKRGSRKKRAETDGDES 1071


>gi|262302913|gb|ACY44049.1| SH2 domain binding protein [Eumesocampa frigilis]
          Length = 173

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 105/172 (61%)

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
            VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+ +P+CP  +R+G+G C  KL  
Sbjct: 2   FVLNGAPNNIPSLLGKACIAFNKKDHRGALAFYKKALRTNPNCPAVVRVGMGHCFMKLAN 61

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
             KA  AF RAL LDP+ V AL  LA++ L   E   IR G+  + +A+ I     M LN
Sbjct: 62  QEKAWLAFSRALDLDPQCVGALTGLAILKLNHQENDSIRDGVHMLSKAYAIDSSNPMVLN 121

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           +LANHFFF   +  V+ L   A + T +   ++ S Y LAR++H +GD ++A
Sbjct: 122 HLANHFFFKKDYHKVQHLALHAFSNTENEAMRAESCYQLARAFHVQGDLDQA 173


>gi|320582772|gb|EFW96989.1| Component of the Paf1p complex [Ogataea parapolymorpha DL-1]
          Length = 1050

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 200/831 (24%), Positives = 352/831 (42%), Gaps = 103/831 (12%)

Query: 3   REYFKQGKVEQFRQILEEG-SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 61
           + Y  QGK+++   +++    SP I +   DV+      L  L  Y T  GK        
Sbjct: 84  KAYASQGKIDESLNVIKNALDSPTIMDATGDVQSTLHGFLAWL--YLTREGK-----NSG 136

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLA-------KGEVEQASSAFKIVLEADR 114
              + LAT+    A  +D     T + +  LLL+       +   E+ S     +L+ + 
Sbjct: 137 LISYELATKETETALSLDPTNELTLMSQALLLLSSDKQKSKQTNFEKESRLLDSLLKKNP 196

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
            N  AL+ +A + F +  Y  +L+ ++R L ++P      R+GIG+C + LG+   A QA
Sbjct: 197 KNCFALMAKAKIFFYKENYVAALKVFQRCLLLNPLLRPDPRIGIGMCYWMLGRKKLANQA 256

Query: 175 FQRALQLDPE-NVEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIY-------PYCAM 224
           +Q ++Q++PE N+EA  L+++A  D     +       EK   A E         P   +
Sbjct: 257 WQNSIQVNPEKNLEAKILISIAKFDDCFTNSVSDADFKEKYALALEFTKASLIDDPTNGV 316

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGP-TKSHSYYNLARSYHSKGDYEKAGLYY 283
            L  LA+ +F    + LV+++ +     T      KS ++  LAR   ++ D  +A   +
Sbjct: 317 ILLILASFYFSKQDYALVQKICDKVSKDTRFSNRIKSDAFLWLARCKFTQNDVLEAQKLF 376

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
            +S+K  N+ +  +   YG GQ  +       A+  FEK+ E +P   E   ALG +Y +
Sbjct: 377 SSSIK-YNENN--LLSRYGYGQCLIVRNQINDAIRAFEKLQESHPRVLEVTLALGMLYSR 433

Query: 344 -LGQIEKAQELLRKAAKI-----DPRDAQAFIDLGELLISSDTGAALD---AFKTARTLL 394
              Q +KA   L K   +     +P ++ A I L  +    D   +L      K      
Sbjct: 434 NPKQTDKATTFLEKYVSLAKEHKEPLNSAALITLARIYEEKDISQSLKYLMMLKDQEISS 493

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
            K   ++   +LNNIGV+   K E            GD +          +Y  +A  ++
Sbjct: 494 GKTESDLSYALLNNIGVLGLLKNE------------GDSL----------SYFENALKAL 531

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQD 512
              K+         +G     P N + ++  +N+AR  E  ++   A  +Y+ IL +   
Sbjct: 532 ESQKE---------EGT----PRNAIKLILEYNVARCKESQNEVETAKTMYQKILQECPG 578

Query: 513 YVDAYLR---LAAIAKARNNLQLSIELVNEA---LKVNGKYPNALSMLGDLELKNDDWVK 566
           Y  A LR   L  ++   +  +   EL+ E+   L+V   Y   +   G   +       
Sbjct: 579 YNSAKLRWLLLTCLSDKEDIHEELAELLAESPDDLEVRSFYGWYVKKFGKKYMATKGKDI 638

Query: 567 AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQH 626
             E  R         D YA  SLGN  Y    R  K A K +  ++ +A +LY +V+   
Sbjct: 639 ESEHHRETLVNHTSHDCYALTSLGNV-YCTLARESKDAQKKDQYYI-RAAQLYQKVLSID 696

Query: 627 TSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 686
             + YAA G  ++ A+K Q  ++ ++F +V+E+      +Q   V+INL H +     +A
Sbjct: 697 PKDAYAAQGIAIIFADKKQVGIALEIFRKVRES------LQDISVYINLGHCFLEAKQYA 750

Query: 687 LAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAG 746
            +++ YQ  L ++    DA I  +++R        +   +    A+  A   Y +    G
Sbjct: 751 KSIESYQLALTRYTNGQDANIYNFISRAWLYRAMAEKAFEYYKTALQFAEKAYKIN---G 807

Query: 747 VAMQKFS--------ASTLQK---TRRTADEVRSTVAELENAVRVFSHLSA 786
           +   KF+        A  L+K   T+RT  ++  ++  L  A++  + L+ 
Sbjct: 808 LPSIKFNIAFVHFQLAEFLRKQPPTKRTVADLEESMVGLTQAIKSLNELAT 858


>gi|242794820|ref|XP_002482454.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Talaromyces stipitatus ATCC 10500]
 gi|218719042|gb|EED18462.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Talaromyces stipitatus ATCC 10500]
          Length = 1198

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 227/1032 (21%), Positives = 415/1032 (40%), Gaps = 189/1032 (18%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ------ 58
            Y KQ +++   +IL++G    +         E++ +LN    +  +L  I+++Q      
Sbjct: 81   YAKQNQLDHAIEILQKG----LASVAHGATKEKLGLLN----WLCWLLMIKSRQAPRVAP 132

Query: 59   -------REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
                   + K+ +   AT   N+ASR++      ++ +G L L +               
Sbjct: 133  DGDSSGVKTKDYYLQQATSTLNEASRLNPAYTPLFLARGVLSLLRASLYPPRPVRAGIPD 192

Query: 99   ----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   EA +     NV A LG A  +++ G Y+++L  Y+  L   P  
Sbjct: 193  TSERVESLRQALKCFEEASKASGGRNVMAHLGLARAQYSLGNYAEALLVYQTVLTRMPGL 252

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---- 205
                 R+GIG C ++LG   +A+ A++RAL L+P++  A + +    L ++         
Sbjct: 253  TDPDPRIGIGCCLWQLGFKERAKDAWERALSLNPKSKVASILVGTYYLYSSSQRPTSDPQ 312

Query: 206  -----RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
                 R  M   Q + ++     MA    A +      +  VE L   A+  T+     S
Sbjct: 313  FGELYRVSMTHTQGSLKLDKDYPMACARFAGYKLIRKDYKAVEVLARKAIEQTDVVSIAS 372

Query: 261  HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTN 319
              +Y L R  H +GD  KA  Y+  S +          P  +G+ Q+Q+K  D   A   
Sbjct: 373  EGWYLLGRKAHYEGDTAKASEYFNRSDQARGGGDSGFLPAKFGVVQMQVKSKDLDGAKFR 432

Query: 320  FEKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAA 358
             EK+++    N E +  LG +  +                     +  +E  + L +   
Sbjct: 433  LEKIIQ-QSKNPECMALLGALLAEDVFSAQASGSKDDKSADATKAISLLESVRSLWKDPT 491

Query: 359  KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKA-G 398
            K  P D    I L  L  S+    ++        +                   LK A  
Sbjct: 492  KNIPPDESVLIYLSRLYESTSPEKSMQCLTQLEEIQMEQIPDQERPHENLQNGELKAALR 551

Query: 399  EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
            E +P ++LNNIG   ++ G+   A + F+ AL      T  D   +     A+ ++L   
Sbjct: 552  EHLPPQLLNNIGCFLYQSGKVAQARELFQSAL------TACDKSEEVEGEKATDALL--- 602

Query: 459  DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                                  T+ +N AR LE +     A  +Y  +L ++ DY +A  
Sbjct: 603  ---------------------TTIRYNFARCLEALDLPDEAKKVYESLLERHGDYTEASA 641

Query: 519  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 578
            R+  IA  ++      + + +  + +       ++ G        W  +K   R A+ A 
Sbjct: 642  RMTYIALRQSPTDEGPKKMAKLYERDSTNLEVRALFG--------WYLSKSKKRVANLAE 693

Query: 579  DGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTR 621
            D +              D YA   +GN +   A  +R E  A K +   + E+A E + +
Sbjct: 694  DHEQRHYKHTLQHFDKHDRYALTGMGNVHLLTARDMRRETDADKEKRRKMYERAVEFFDK 753

Query: 622  VIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF 680
             +     N YAA G  + L + +  F  +  +F+++++       ++   V++NL H Y 
Sbjct: 754  ALQLDPKNAYAAQGIAIALVDDRKDFAGAVQIFSKIRDT------IKDASVYLNLGHAYA 807

Query: 681  AQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIH 733
                F  +++ Y+  L K     DAQ+L  L R  +   + E+     K+ L    RA+ 
Sbjct: 808  ELKQFTRSIECYETALSKDRAR-DAQLLACLGRVWWLRGKHEKNLTAMKTALDYANRALA 866

Query: 734  LAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 791
            +AP    L F+      + +   ++L +T+RT  +++     LE A+  F+ ++    + 
Sbjct: 867  VAPEQAHLEFNVAFVQNQVALLVNSLPETQRTLQDLQEAAEGLEKAIETFTRIA---QVK 923

Query: 792  LHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE--QQNRQRQEAARQAALAEEARRKAE 849
               +  + +       ++ + + ++ R    ++E   +N  + + AR A  AE  RR+ E
Sbjct: 924  TPPYPRESLEQRANMGRNTI-SKQLERSIQNQKEYEDKNALKLQQARAAREAELKRREEE 982

Query: 850  EQKKYLLE---KRKLEDEQKRLRQQEEHF--QRVKEQWRSSTPASKRRERSE-NDDDEVG 903
             +K   LE   KR+L +E++R+ ++ +    +R +EQ        + RE +E   D E G
Sbjct: 983  VRKAQELENERKRRLAEERQRIIEETQRLAAKRAEEQ--------RAREAAELTTDSETG 1034

Query: 904  HSEKRRRKG--G 913
              +KR+RK   G
Sbjct: 1035 ERQKRKRKASSG 1046


>gi|361129893|gb|EHL01769.1| putative Tetratricopeptide repeat protein 1 [Glarea lozoyensis 74030]
          Length = 1581

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 259/1142 (22%), Positives = 459/1142 (40%), Gaps = 210/1142 (18%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
            Y KQ KV+   ++L +G      +       E++++L  L   Y +           G +
Sbjct: 470  YAKQKKVDTAIELLIKGG-----QVMRGGPREKLSMLTCLCWMYLWKSREAPRVAPEGVL 524

Query: 55   ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS-SAFKIVLEAD 113
             ++ R K+    L+T   N+A RI+   P  ++ +G L L K  ++  S SA    ++ D
Sbjct: 525  PSEARTKDYFLGLSTSTLNEALRINPAFPPLFLARGVLQLLKASLQPPSKSAAPGAIDID 584

Query: 114  RD--------------------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
            +                     N+ A+LG++   ++ G+++++LE Y+  L   P     
Sbjct: 585  KAEILRASLKSFEDAIRVSQGRNMMAVLGKSRALYSLGKFAEALEGYQEVLHKMPELVDP 644

Query: 154  -IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR 206
              R+GIG C ++LG    A+ A++RAL++ P++  A + L +  L A      N    IR
Sbjct: 645  DPRIGIGCCFWQLGFKEDAKTAWERALEISPDSKTANILLGLFYLDASAHVPTNGPEFIR 704

Query: 207  ---KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
               K M E  Q+AF+      +     A +F        V+ L   A+  T+     S  
Sbjct: 705  LYKKAMTEYTQKAFKADKDLPLTCATFAGYFLSRKSLPNVDTLAHKAIQYTDVNAIASDG 764

Query: 263  YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFE 321
            +Y LAR  H   DYE+A  YY  + +          P  +G  Q+ +   DF  A    E
Sbjct: 765  WYLLARKEHYDEDYERATDYYRRADEARGGAERGYLPAKFGAAQLAVLKSDFGEAKLRLE 824

Query: 322  KVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKI 360
            K+++    N E +  LG +Y +                     +G +E A+   +   K 
Sbjct: 825  KIIQ-QSKNIEAMVLLGTLYAEEVFVSQQSAVKEDKSTEFKKAIGYLETARNAWKDPKKN 883

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKAGEE- 400
               D+   ++L  L        +L   +    +                   LK++  E 
Sbjct: 884  LIADSSVLLNLARLYEVDQPEKSLQCLQQVEQIEYDRLPKDEKPDDPEEIAALKESLREG 943

Query: 401  VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 460
            +P ++LNN+G  +++  +FE A   F+ AL                      + ++  + 
Sbjct: 944  LPPQLLNNMGCFYYQSEKFEQAGAMFQVALN---------------------ACMKITET 982

Query: 461  QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL 520
            Q     E DG+ +       T+ +NL R  E       A+ +Y  +L ++ +Y DA  R 
Sbjct: 983  QE----ELDGDAL-----VTTISYNLGRTYEASGQLDEANTVYEGLLARHDNYTDARTRQ 1033

Query: 521  AAIAKARNNLQLSIELVNEA-------LKVNGKYP------NALSMLGDL----ELKNDD 563
            A IA  +N      + + E        L+V   Y       N+   +G+L    EL++  
Sbjct: 1034 AYIALRQNPTDDGPKKMGELYKDASADLEVRALYGWYLGRVNSRKKIGNLAEDSELRH-- 1091

Query: 564  WVKAKETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYT 620
                   ++      D  D YA + +GN     A  +R E    K + + +  KA E + 
Sbjct: 1092 -------YKHTLQGYDKHDRYALIGMGNLYLMTAREMRRETDQDKQKRSAMYTKAVEFFD 1144

Query: 621  RVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 679
            + +     N YAA G  + L E K     +  +F +V+E       V+ P V++NL HV+
Sbjct: 1145 KALQLDPKNAYAAQGIAIALVEDKKDLKTALSIFVKVRET------VKDPSVFVNLGHVF 1198

Query: 680  FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQ----WQDCKKSLLRAI 732
                 ++ A++ Y+  L K   + DAQIL  L RT      AE+    +++  +  L+A+
Sbjct: 1199 AELHQYSKAVEHYEAALSK-DRSRDAQILACLGRTWLAKGRAEKNLTGYKNALEYSLKAL 1257

Query: 733  HLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS--AASNL 790
             LAP          +A   +     Q   RT  EV++    LE A+     ++    +  
Sbjct: 1258 ELAPEQ--------LATAVYGTPEAQ---RTLAEVQAAAEGLEAAIESLEAIAQHPQTPF 1306

Query: 791  HLHGFDEKK---INTHVEYCKHLLDAAKIHRE-------AAEREEQQNRQRQEAARQAAL 840
              H  +++     NT  +  +  + A K + E       AA+++ ++  +R+E A++AA 
Sbjct: 1307 PKHDIEQRANMARNTMRKQLERSIQAQKEYEEKNFEKLQAAKQKREEELKRREDAKKAAQ 1366

Query: 841  AEEARRK---AEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASK------- 890
              E  RK   AEE++K   + R+L D    LR +E+  +   E    S    K       
Sbjct: 1367 QAELDRKLKIAEERQKIAEKDRELAD----LRAEEDRAREAAELTTDSETGDKVKRKKKP 1422

Query: 891  ----RRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDED 946
                 + + +NDD          R+   RR+  + S    + E  +      ++   D+ 
Sbjct: 1423 RGGGGKRKKKNDDGITDDESGGEREPKPRRRAKRGSGDDSDEEKPKKKRRLAKKGANDKP 1482

Query: 947  ASMNYREPIGQMNDQDD----DVEENANDRLAAAGLEDSDVD-DEMAPSITAARRRRALS 1001
            +     E + + +   D    D  +  +D + +      DVD DE AP+    + RRA+ 
Sbjct: 1483 SKFKSSEIVVESDSDGDNGAADALKEMDDEVLSDAPASMDVDEDEAAPAPAKRKNRRAMI 1542

Query: 1002 ES 1003
            +S
Sbjct: 1543 DS 1544


>gi|171686578|ref|XP_001908230.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943250|emb|CAP68903.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1275

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 222/944 (23%), Positives = 377/944 (39%), Gaps = 164/944 (17%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTY-------LGKIETK 57
           Y KQ KV+   +IL  G    +    ++ R E++ ++  L   Y +       +    T 
Sbjct: 87  YAKQKKVDFAIEILSRG----VVAMQSNQR-EKLTVITCLCWMYLWKSREAPRVAPEGTD 141

Query: 58  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS-------------- 103
            R KE +   ATQ  N ASR++   P  ++ +G LLL K  ++  S              
Sbjct: 142 ARTKEYYLQQATQSLNDASRLNPAFPPLFLARGVLLLLKASLQSPSQDPNGVDVQKSEHV 201

Query: 104 -SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLG 157
            +A K   EA R     N+ A +G+A   F+  +Y +SL  Y+  L   P       R+G
Sbjct: 202 RNALKSFEEAIRVSHGKNMLASMGKARALFSLAKYQESLAAYQDVLAKMPDLVDPDPRIG 261

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKG 208
           +G C ++LG    A+ A++R+L++ P++  A + L +  L A+              +K 
Sbjct: 262 VGCCLWQLGYKDDAKGAWERSLEISPDSKIAKILLGLYYLDASSQVPTNSPEFLRYYKKA 321

Query: 209 M-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
           M E  Q +F+      +     A +F    Q   V+ L   A+  T+     S  +Y LA
Sbjct: 322 MTEYTQDSFKRDKNLPLTCATFAGYFLARKQFPNVDSLAHKAIQYTDVNAIASDGWYLLA 381

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEI 326
           R  H +G+ +KA  YY  +            P  +GL Q+ +   D   A    EK+++ 
Sbjct: 382 RKEHYEGNLDKASDYYRRADDARGGVERGYLPAKFGLAQLSVLRNDLGEAKLRLEKMIQ- 440

Query: 327 YPDNCETLKALGHIYVQ--------------LGQIEKAQ---ELLRKAAKIDPR-----D 364
              N E +  LG +Y +                + +KA    E +R A K DP+     D
Sbjct: 441 QSKNLEAMILLGTLYAEEVFANQTAAIKEDKTAETKKALTYLEAVRTAWK-DPKKGMLPD 499

Query: 365 AQAFIDLGELLISSDTGAALDAFK-----------------------TARTLLKKAGEEV 401
           A   ++L  L  +     AL   +                         R+ ++K    +
Sbjct: 500 AAVLLNLARLYETEFPDRALQCLQQVEQLEIDQVPKSEYPADAEDQAVIRSAIRK---HL 556

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
           P ++LNNIG  + + G  + A + F+ AL     ++ L+       +D  A +       
Sbjct: 557 PPQLLNNIGCFYSQDGRHQLATEYFQAALDSCARISSLNDTE----VDTDALL------- 605

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                              T+ FNL R  E   D   A   Y  +L ++ +Y DA  RLA
Sbjct: 606 ------------------TTISFNLGRSYEYEGDVDRAIETYERLLSRHSNYTDARARLA 647

Query: 522 AIAKARNNLQLSIELVNEALKVNGKYPNALSM-------LGDLELK------NDDWVKAK 568
            I   +N  +   + V +  + N   P+ L +       LG L  K      N+D     
Sbjct: 648 YIKLRKNPNKDGPDAVAKLYQDN---PSDLEVRALYGWFLGKLSAKKRPANINED--PEH 702

Query: 569 ETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQ 625
             ++      D  D YA + +GN    +A  +R E    + + + +  +A E + + +  
Sbjct: 703 RHYKHTLQNYDKHDRYALVGMGNLLLGSAREMRRESEQDRQKRSSMYSRAVEFFDKALQL 762

Query: 626 HTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNF 685
              N YAA G  + L E       KD  T +Q        VQ   V++NL H+Y   G F
Sbjct: 763 EPKNAYAAQGVAIALVED-----KKDAKTALQAFLKVKETVQDAHVFVNLGHIYTELGQF 817

Query: 686 ALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA--------EQWQDCKKSLLRAIHLAPS 737
           + A++ Y+  L K     DA +L  L RT            E +    +   +A+ +AP 
Sbjct: 818 SKAIESYEIALSKEGKANDAGVLSCLGRTWLNKARTDKKFIEHYNMALEYAQKALKVAPE 877

Query: 738 NYTLRFDAGVAMQKFSASTLQK---TRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG 794
               +F+    +Q   A TL++     R + ++      LE A++    ++A  N     
Sbjct: 878 QAHFKFNVAY-VQIMLADTLRQFASQDRNSFQLEQAAEGLEQAIKTLDEIAAGPNPPYPK 936

Query: 795 FD-EKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQ 837
            D E++ N      ++ L+ A    +A +  E +N+++++AA Q
Sbjct: 937 HDIEQRANMARNTVRNQLNRA---LQAQKEYEAKNKEKRDAAIQ 977


>gi|402077257|gb|EJT72606.1| tetratricopeptide repeat protein 1 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 1220

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 201/834 (24%), Positives = 340/834 (40%), Gaps = 142/834 (17%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAK------------GEV 99
           G + ++ + KE +  LAT   N+ASRI+   P  ++ +G L L +            G V
Sbjct: 129 GTLASEAKTKEFYLQLATSTLNEASRINPAFPPLFLARGVLYLLRASLQVPMKPGQSGPV 188

Query: 100 EQAS-----SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
           + A      SA K   +A R     N+ A++G++   F+ G+Y+++L  Y+  LQ  P  
Sbjct: 189 DAAKADLLRSALKSFEDAIRVSQGKNMLAVMGKSRALFSLGKYAEALAGYQDVLQRMPDM 248

Query: 151 PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAA 203
                RLGIG C ++LG    AR A++R L+++P++  A + L +  L A      N   
Sbjct: 249 VDPDPRLGIGACFWQLGYKDDARAAWERCLEINPDSKTANILLGLYYLDASGQVPTNSPE 308

Query: 204 GIR---KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
            IR   K M E  Q++F++     +     A +F        V+ L   A+  T+     
Sbjct: 309 FIRLYKKAMTEYTQKSFKLSKDLPLTCATFAGYFLSRKSFQNVDSLAHKAIQFTDVNAIA 368

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
           S  +Y LAR  H +GD +KA  YY  S            P  +G  Q+ +   D   A  
Sbjct: 369 SDGWYLLARKEHHEGDVDKAADYYRRSDDARGGTERGYLPAKFGAAQLSVVKEDLGEAKL 428

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDP 362
             EK+++      E +  LG +Y +               G+++KA  LL   +AA  D 
Sbjct: 429 RLEKMIQ-QSRTYEAMILLGTLYAEEVFANQYATVKEDKSGEVKKAISLLEGVRAAWKDT 487

Query: 363 R-----DAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKAG 398
           +     DA   + L  L    +   AL   +    L                   L+ A 
Sbjct: 488 KKNLAPDASVLLSLARLYEVDNPDKALQCLQQVEQLETEQIAEADRPTGIEDEAELRAAV 547

Query: 399 EEV-PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
            ++ P ++LNNIG  H +    E+A   F+ ALG  + +   D +  T  +         
Sbjct: 548 RKLLPPQLLNNIGCFHSQNERHETASDMFEAALGACMRIQEGDEQMDTDAL--------- 598

Query: 458 KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
                                  T+ +NL R  E    +  A  +Y  +L ++ DY DA 
Sbjct: 599 ---------------------VTTISYNLGRSYEARGLSDQAIEVYEGLLKRHDDYTDAK 637

Query: 518 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM-------LGDLELKNDDWVKAKET 570
            R+A + K R   Q + E  +   K+  ++P  L +       LG +  +      A + 
Sbjct: 638 TRMAYL-KLRK--QPNKEGPDAVAKLYQEHPADLEVRALYGWYLGKVHSRKRQVNIADDP 694

Query: 571 ----FRAASDATDGKDSYATLSLGNWNYFAALRNEKR-----APKLEATHLEKAKELYTR 621
               +R      D  D YA + +GN  Y A+ R  +R       K  AT+  +A E + +
Sbjct: 695 ELRHYRHTLQHYDKHDCYALVGMGNL-YLASAREMRRETDQDKAKRSATY-NRAVEFFEK 752

Query: 622 VIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF 680
            +     N YAA G  + L E +     +  +F  V++       ++   V++NL H++ 
Sbjct: 753 ALQLDPKNAYAAQGIAIALVEDRKDHKNALPIFLSVRDT------IKDAQVYVNLGHIFA 806

Query: 681 AQGNFALAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIH 733
               F  A++ Y+  L K     D  IL  L RT      +E+  D  K  L    +A+ 
Sbjct: 807 ELRQFTKAIENYEAALAKEGKANDPSILACLGRTWLNKARSERDLDAYKMALECAKKALD 866

Query: 734 LAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLS 785
           +AP     +F+      + + +   L +T+R+ ++++   A LE A+     ++
Sbjct: 867 VAPEQVHFKFNVAFVQIQLATTINGLSETQRSLEQLQDAAAGLEAAIVALDEIA 920


>gi|449301021|gb|EMC97032.1| hypothetical protein BAUCODRAFT_68395 [Baudoinia compniacensis UAMH
            10762]
          Length = 1197

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 230/1000 (23%), Positives = 406/1000 (40%), Gaps = 181/1000 (18%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQR----- 59
            Y KQ KV     IL++G    +    A    +R+++L+ L   Y ++ +   ++      
Sbjct: 80   YAKQKKVAIAIDILQKG----LGALRAGRGEDRLSMLSCLCWLYLWMCRRAVRKPMQSAD 135

Query: 60   ---EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE----------QASSAF 106
                K+    L TQ  N ASRI+      ++ +G L L +  ++          QA+ +F
Sbjct: 136  DVPNKDYWLKLGTQTLNDASRINPSYAPLYLARGTLYLLRASMQTPKERADTLKQAAKSF 195

Query: 107  KIVLE-ADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 163
                  + + N+ A+LG+A V+F+ GR+++SL  Y++ALQ  P    P   R+GIG C +
Sbjct: 196  DEAYRLSGQKNIMAVLGKARVQFSLGRFAESLALYQQALQSAPDMLDPDP-RIGIGCCLW 254

Query: 164  KLGQLGKARQAFQRALQLDP-ENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
            +L     AR A+QR+L L P EN+ A  L+ L+ +D  +  A+   +      +A  ++ 
Sbjct: 255  QLEHKDAARGAWQRSLDLKPDENIIANVLLGLSYLDESSQYASSDSQFRSLYSKAMTVHT 314

Query: 221  YCAMALNYLANHFFFT---GQHFL-------VEQLTETALAVTNHGPTKSHSYYNLARSY 270
              A  ++  A H   +   G++FL       VE+L   A+  T+ G   S  +Y +AR  
Sbjct: 315  QAAFKMD--AMHALTSATLGEYFLRRQNWDNVERLGRRAVEQTDVGAIASDGWYLMARKE 372

Query: 271  HSKG-DYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY- 327
            H  G D  KA  +Y  A V        F+   +G  Q++  +GD   A    +K++    
Sbjct: 373  HYLGTDLTKAAEHYNKADVARGGDEKGFLPAKFGGAQLKTLMGDLDGAKFRLDKIISGSN 432

Query: 328  ------PDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKI 360
                    + E +  LG +Y +                     +G +E+ + + +   + 
Sbjct: 433  AATGGGQKSVEAMTLLGMLYAEEVFANQAAAGKEDKTVEQKKAIGLLEQVRVIWKDPKRK 492

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFKTARTL----LKKAGEEVPIEV----------- 405
               DA   ++L  L        AL   +    +    +    E +P E+           
Sbjct: 493  GSPDAAVLLNLARLYEQEQPEKALACLQHVEQMELDDIADDDERLPDEIGEATEERRAKR 552

Query: 406  -------LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
                   LNNIG  HF+   F  A + F+ AL   + +   D+   T   DA  S     
Sbjct: 553  ELLSPQLLNNIGCFHFQADRFTEAREDFQTALNSCVKMGERDASLDT---DALVS----- 604

Query: 459  DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                                  T+ +NLAR  E       A  +Y  +L ++ +Y DA  
Sbjct: 605  ----------------------TISYNLARTYEAEGMNEEARRIYDGLLERHPNYTDANA 642

Query: 519  RLAAI---------AKARNNLQLSIELVNEALKVNGKY-----PNALSMLGDLELKNDDW 564
            RLA +         A+A   L  S     E+  + G Y         ++  D+E K+   
Sbjct: 643  RLAYLSLSAAPADGAEAIKQLMESDPSNLESRALYGWYLHRSKKRTHNLPEDVEQKH--- 699

Query: 565  VKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK----AKELYT 620
                  ++      D  D Y+ + +GN  + A  R  +R    +     K    A E + 
Sbjct: 700  ------YKDTLQKFDKHDMYSLVGMGNL-HLAVAREMRRETDQDKDRRSKTYMRAVEFFD 752

Query: 621  RVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEA---ASGSVFVQMPDVWINLA 676
            +V+     N +AA G G+ +AE K   + +  +F++V+E+    SGSV        +NL 
Sbjct: 753  KVLTLDPRNAFAAQGLGIAMAEDKKDTNAAIQIFSKVRESLKGLSGSVH-------LNLG 805

Query: 677  HVYFAQGNFALAMKMYQNCLRKFYY-----NTDAQILLYLART-------HYEAEQWQDC 724
            HV+     ++ +++ Y+  L +          D QIL  L R          + E +Q  
Sbjct: 806  HVFAEMRQWSRSIENYELALSRSAKERADGKPDPQILACLGRVWLMRGRQEKKLEAYQTS 865

Query: 725  KKSLLRAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFS 782
                 +A+ LAP N + RF+      + +     L + +++  +V      L++A+  F 
Sbjct: 866  LDLSKQALELAPENVSFRFNVAFVQIQLTQLLIGLPEAQKSLQDVEQAGHGLDDAINAFI 925

Query: 783  HLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAERE--EQQNRQRQEAARQAA 839
             ++ + N      D E + N      K  L  A   +   ER+   +    R+    +  
Sbjct: 926  EIAKSPNPPFPRGDLEARANMGRNTMKRQLAGAMEKQAEYERKNASRLEEARRRREEEIK 985

Query: 840  LAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 879
              E+ +RKAEE  +   ++RK+++E+ R+ +++    R K
Sbjct: 986  KREDDKRKAEEAAEE--QRRKVKEERDRMAEEDREMVRRK 1023


>gi|157812820|gb|ABV81155.1| putative CG2469-like protein [Prodoxus quinquepunctellus]
          Length = 173

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 106/173 (61%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +NVP+LLG+AC+ FNR  +  +L FYK+AL+ +P  P  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNVPSLLGKACIAFNRKDFRGALAFYKKALRTNPDSPAVLRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KL    KAR AF+RALQLDP+ V ALV L+++ L   E    +  +  + +A+ I P 
Sbjct: 61  FMKLNNQEKARMAFERALQLDPQCVGALVGLSILKLNLQENESNKMAVIMLSKAYAIDPK 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             M LN+LANHFFF   +  V+ L   A   T +   ++ S ++LAR++H++G
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEAMRAESCHHLARAFHAQG 173



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 312 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           DFR AL  ++K L   PD+   L+  +GH +++L   EKA+    +A ++DP+   A + 
Sbjct: 31  DFRGALAFYKKALRTNPDSPAVLRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVG 90

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFE 420
           L  L ++       ++ K A  +L KA    P    VLN++    F K ++ 
Sbjct: 91  LSILKLNLQEN---ESNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYN 139


>gi|402225916|gb|EJU05976.1| TPR-like protein [Dacryopinax sp. DJM-731 SS1]
          Length = 1133

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 208/893 (23%), Positives = 376/893 (42%), Gaps = 178/893 (19%)

Query: 53  KIETKQREKEEHFILATQYYNKAS----RIDMHEPSTWV----GKGQLLLAKGEVEQASS 104
           K+++K +EK       + Y N+A+    R+D   P   V     K    LA+  ++ A  
Sbjct: 112 KLDSKVQEK-------SVYINEAATSMARMDSVVPKLSVVQLLSKAVSQLAENAIDAAGR 164

Query: 105 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
            F  +L+  ++N  AL+G+  +++ R  Y D+L+ ++ AL+  P      R+GIGLC + 
Sbjct: 165 TFDEILQQQQNNSVALMGKGRIQYARRNYRDALKSFQEALKYAPDLLPDPRVGIGLCAWS 224

Query: 165 LGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEAAGIRKGMEKMQRAF------ 216
           LG   +AR+A+QR+L++ P+    + L+ L+++    N+A   R+   +  RA+      
Sbjct: 225 LGDQDRARRAWQRSLEVHPDLPAPQILICLSLL----NDAKDKRRDQRERSRAYSQGIKG 280

Query: 217 ------EIYPYCAMALNYLANHFF-------FTGQHFLVEQLTETALAVTNHGPT----- 258
                 +   +CA+  + L+ +F           Q+ L+  LT    AV     T     
Sbjct: 281 LAALFRDRGKHCAIVADALSAYFMERKEWDKVRAQYDLIHLLTSVFQAVKAAERTIQFAD 340

Query: 259 ----KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
                S  Y  L R  H +GD  +A   Y  SV    K         GLGQV +   +  
Sbjct: 341 LRSVVSDGYMRLGRIAHLRGDLPQAVEQYGISVDRNEKNQ---LARTGLGQVHILTNEIP 397

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQL-----------GQIEKAQELLRKAAKI--- 360
           +A+ ++E +L    +  E L  L  +               G++ +A++L  +AA+I   
Sbjct: 398 AAIHDYELLLSDNQNLIEALLPLASLQASAWPGASPVEQDAGKV-RARQLYDRAARIIKG 456

Query: 361 ------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE---VPIEVLNNIGV 411
                    D + ++++ +L  + D+  A +A+  A  L ++  +    V  ++LN + V
Sbjct: 457 KEVETEGMEDPELWVEVAKLWQAEDSNKAREAYARAVELARETADPEKGVDPKLLNALAV 516

Query: 412 I-HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 470
           I H   GE  +     +D     ++   L   TK                        +G
Sbjct: 517 IRHIHGGE--TGRTEARD-----LYQEALVGATKA----------------------EEG 547

Query: 471 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 530
              E+   +   L+NLAR  E + +   A   Y+ +L ++ +YVDA  RLA + + +  +
Sbjct: 548 PENEM--VQTATLYNLARCWEALGEQTQAQEAYQKLLSRHPEYVDAKARLAHVYQQQGRI 605

Query: 531 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLG 590
             +  L+ +AL+         S   +L+L++         F A+   +     +A L+L 
Sbjct: 606 DEAHGLLKDALE---------SQTDNLDLRS-----YYTYFLASHKQSRQSSKFAQLTLS 651

Query: 591 NWN--------------YFAALRNE---KRAPKLEATHLEKAKELYTRVIVQHTSNLYAA 633
           N++              Y AA  N      A K+   H +   + Y +V+    +  YAA
Sbjct: 652 NYDKHDVYALSAVAADLYSAARENRDTGSEAIKVRRKHFQNCAQAYDKVLSLDPNCAYAA 711

Query: 634 NGAGVVLAEKGQFDVSK--------------------DLFTQVQEAA-SGSVFVQMPDVW 672
            G  +++AE     ++                      +F +V+E+  +GSVFV      
Sbjct: 712 MGLAIMIAEDALGGLAGAPVPGADEARERERNAAEALGVFGRVRESINNGSVFV------ 765

Query: 673 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL 729
            N+ H Y+    F  A++ Y+   R FY   D  +LL+L R  Y     EQ ++  ++ L
Sbjct: 766 -NMGHCYYTLEQFQKAIESYELASR-FYNGKDFAVLLHLCRAWYAKANLEQNREGMETAL 823

Query: 730 ----RAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSH 783
               +A+ LAP +    +D  V  QKF+    +L   RRT ++++  + + + A   F+ 
Sbjct: 824 DYAKKALALAPEDKATVYDIAVIQQKFAELLFSLPPDRRTLEKLQEAIDQAQEAQGTFAA 883

Query: 784 LSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAAR 836
           L    +  +  F     +    Y + +L  +  H EA +  EQ+   + EAAR
Sbjct: 884 LVEDKST-VMPFARDLPDQRRRYGETVLRKSGEHVEAQKAYEQEVVAKTEAAR 935


>gi|358387075|gb|EHK24670.1| hypothetical protein TRIVIDRAFT_31492 [Trichoderma virens Gv29-8]
          Length = 1201

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 193/836 (23%), Positives = 335/836 (40%), Gaps = 161/836 (19%)

Query: 59  REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE------------------ 100
           + KE +  LAT   N A+R++   P  ++ +G LLL +  ++                  
Sbjct: 141 KTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQGPSKTAGGLGTEKSELLK 200

Query: 101 QASSAFKIVLEADR-DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGI 158
            A+ AF   L   +  N+ AL+G+A   F+  +Y ++L  Y+  LQ  P       R+GI
Sbjct: 201 NAAKAFDDALRVSQGKNMLALMGKARTLFSMHKYPEALATYQDVLQKRPDLVDPDPRIGI 260

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG---------- 208
           G C ++LG    A+ A++R L+++P++    + L +  L A+    +             
Sbjct: 261 GCCFWQLGFKEDAKVAWERCLEINPDSKVPNILLGLYYLDASGHVPVNSDEFLKLYKTAM 320

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
           +E  Q++F++     +  +  A +F         ++L   A+  T+     S  +Y LAR
Sbjct: 321 IEYTQKSFKLDKEVPITCSTFAGYFLSRKAWDNADKLAHKAIQYTDVNAVASDGWYLLAR 380

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIY 327
             H  GD E+A  YY  +            P  +G+ Q+ +   D   A    EK+++  
Sbjct: 381 KAHYNGDLERASDYYRRADDARGGTETGYLPAKFGVAQLSVMKNDLGEAKLRLEKIIQ-Q 439

Query: 328 PDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR-----DA 365
             N E +  LG IY +                +++KA  LL   R + K DP+     DA
Sbjct: 440 SKNHEAMILLGTIYAEEIFTSQNSDSKEDRSAEMKKAIALLEGVRNSWK-DPKKALSPDA 498

Query: 366 QAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE------------------VPIEVL 406
              ++L  L  + +   AL   +    L L++  E                   +P ++L
Sbjct: 499 SVLLNLARLYETENPEKALQCLQQVEQLELEQIPESERPTDVPEAEIQAALRKFLPPQLL 558

Query: 407 NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRF 466
           NNIG  H +  + + A + F+ ALG       + +  K   +D  A +            
Sbjct: 559 NNIGCFHSQAEKHDLASELFEAALG-----ACMRAGEKDPTMDTDALV------------ 601

Query: 467 ENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKA 526
                         T+ FNL R  E    T  A  +Y  +L ++ DY DA  RLA I K 
Sbjct: 602 -------------TTISFNLGRSYEARGLTDKAVEVYEGLLNRHDDYTDARTRLAYI-KL 647

Query: 527 RNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAK-ETFRAASDAT- 578
           R N              N + P+A++ L      DLE++    W   K  + +  ++ T 
Sbjct: 648 RKN-------------PNKEGPDAVAKLYQENTADLEVRALYGWYLGKVHSRKRPANITE 694

Query: 579 --------------DGKDSYATLSLGNWNYFAA--LR--NEKRAPKLEATHLEKAKELYT 620
                         D  D YA + +GN     A  +R   E+   K  AT+  KA E + 
Sbjct: 695 DHEFRHYKHTLQNYDKHDRYALVGMGNLYLLQAREMRRETEQEKQKRSATYC-KAVEFFE 753

Query: 621 RVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 679
           + +     N YAA G  + L E K  +  +  +F +V++    S       +++NL H++
Sbjct: 754 KALSLDPKNAYAAQGIAIALVEDKRDYKTALTIFNKVRDTVKDS------HLYVNLGHIF 807

Query: 680 FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY-------EAEQWQDCKKSLLRAI 732
                F+ A++ Y+  L K   + D  IL  L RT         + + +    +   +A+
Sbjct: 808 AELKQFSKAIEHYEIALSKDGKSNDPVILSCLGRTWLNRGRADRDVDSYIKALECAKKAL 867

Query: 733 HLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSA 786
            +AP     +F+      +   +   L + RRTA+++      LE A+     ++A
Sbjct: 868 EVAPDQIHYQFNVAFVQIQLVTTIQGLPENRRTAEQLEEASEGLEAAIESLDKIAA 923


>gi|409045340|gb|EKM54821.1| hypothetical protein PHACADRAFT_258943 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1101

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 197/905 (21%), Positives = 366/905 (40%), Gaps = 155/905 (17%)

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            T++ +G + L+   ++ A   F  VL     N+ ALLG+A + + + ++  +L  ++  L
Sbjct: 162  TFLTRGIIQLSTRNMDDALRTFDGVLVTKSTNLVALLGKARILYAKRQFPQALRIFQDVL 221

Query: 145  QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQANEA 202
            + +P+C    R+GIGLC + + Q  +A+ A++R+++++P    A  L+ L  ++   NE 
Sbjct: 222  RYNPNCVPDPRIGIGLCFWAMDQKARAKAAWERSVEVNPSQWPAQLLLGLEAINSSKNEN 281

Query: 203  AGIRK-------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
                +       G   +++AF      + A N L   F   GQH    +L E  +   + 
Sbjct: 282  QSEEERRQEFLFGTRLIEKAFNANQKNSAASNALCELFLRKGQHKRALKLAERTIQFADT 341

Query: 256  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
                +  Y    R    +G + +A  ++  + K   +P   +    GL Q QLK  +  +
Sbjct: 342  LTVLTDGYIRAGRVLQQEGSHSEAQKHFTVANK--GQPTN-VLAAIGLAQTQLKNEEAFA 398

Query: 316  ALTNFEKVLEIYPDNCETLKALGHIYV-------------QLGQIEKAQELLRKAAKI-- 360
            A+   + +L+   ++  + +A   +               Q    ++A+EL  +  K+  
Sbjct: 399  AIHTLDFLLQAQNNSGRSAEAAAMLASLRAHPRPGVSNSDQAKDKQRARELFDQVCKMLN 458

Query: 361  ----------------------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 398
                                     D Q   ++ +L    D G    A + A  L +  G
Sbjct: 459  LPEQAHTILNGHAPALTRSQRQVAEDVQLHAEIAKLFYQEDVGRVERACQEAVRLSEATG 518

Query: 399  EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
               P  ++N++  +    G  + A   ++ AL D        S   T   D+ A+     
Sbjct: 519  HPDP-RLINDLAALRHLSGRLDEARSMYERALTDA-------SSQGTRESDSMAT----- 565

Query: 459  DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                                  ++L+NLAR+ E   + + A   Y  +L ++ +YVDA +
Sbjct: 566  ----------------------SILYNLARVYEDQGEEITAKDAYEKLLSRHPEYVDAKI 603

Query: 519  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 578
            RLA +    N    + EL+ ++L       N  +      +++     AK+   +     
Sbjct: 604  RLAQMLVDLNRHNDAHELLKQSLASQNSNLNLRAFYTHFLIQSGLPKPAKDFVFSTLKDH 663

Query: 579  DGKDSYATLSLGNWNYFAALRNEKRAPK---LEATHLEKAKELYTRVIVQHTSNLYAANG 635
            D  D Y+  + G   Y  A  +    PK          ++ E Y + +       +AA G
Sbjct: 664  DKHDIYSLCAAGWIQYHQARESRDATPKGIEERKQGFRRSAEFYEKALHLDPMCAFAAQG 723

Query: 636  AGVVLAEK------------GQFDVSK---------DLFTQVQEAAS-GSVFVQMPDVWI 673
              +V AE             G  + SK         D+F +V+E+   GSV+        
Sbjct: 724  LAIVTAEDALGTLGGSLGPVGPDEASKRVKNAREALDVFAKVRESLDDGSVYS------- 776

Query: 674  NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLLR 730
            N+ H Y+A   +  A++ Y+   RKFY N +  +LL L R+ Y     +Q      + LR
Sbjct: 777  NMGHCYYASDEYDRAIESYETASRKFYNNHNVSVLLCLCRSWYAKANKDQSFAAMTTALR 836

Query: 731  ----AIHLAPSNYTLRFDAGVAMQKFSASTLQ--KTRRTADEVRSTVAELENAVRVFSHL 784
                A+HL P +  + ++  +  QK +   L     +R+  E+R  + + ++A ++F  L
Sbjct: 837  YAQQALHLHPHDKAITYNIAMIEQKAAEMLLSVPPAKRSLMELRRAIEQAQHAQKLFQSL 896

Query: 785  SA-ASNLHLHGFD-----EKKINTHVEYCKHLLDAAKIHR-------EAAEREEQQNRQR 831
            +A  SN   +  D      K   + +  C   L   +++        E A R+ Q+++ +
Sbjct: 897  AADKSNQLPYSTDIADQRRKYGESVLRRCDDHLATQRLYESETQAKLEEARRKRQEDKDK 956

Query: 832  Q--------EAARQAA--LAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQ 881
            Q        E  RQ +  L EE +R  EE  ++ LE R  +DE+       E  ++VK+ 
Sbjct: 957  QDQIELERLEKIRQDSEKLTEERKRAREEALRWTLEHRDSDDEK-------EPQKKVKKA 1009

Query: 882  WRSST 886
             R+ T
Sbjct: 1010 RRTRT 1014


>gi|380477354|emb|CCF44207.1| tetratricopeptide [Colletotrichum higginsianum]
          Length = 1205

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 241/1061 (22%), Positives = 413/1061 (38%), Gaps = 229/1061 (21%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
            Y KQ K++   ++L  G +   D    +   E+++++  L   Y +           G++
Sbjct: 79   YAKQKKIDHAIEMLVRGGNAMRD----NNPREKLSMIGCLCWMYLWKSREAPRVPPDGEL 134

Query: 55   ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKG--QLLLAKGEVEQAS--------- 103
             ++ + KE +  LAT   N ASRI+   P  ++ +G  QLL A  +  +AS         
Sbjct: 135  ASEAKTKEYYLQLATSTLNDASRINPAFPPLFLARGVLQLLRASLQTPKASGHGQVDSEK 194

Query: 104  -----SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGA 153
                 SA K   +A R     N+ A++G+A   F+ G+Y +SL  Y+  LQ  P      
Sbjct: 195  ADLLRSALKAFEDAIRVSQGKNMLAVMGKARTFFSLGKYPESLACYQEVLQKMPDFVDPD 254

Query: 154  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR- 206
             R+GIG C ++LG    A+ A++R L+++P++    + L +  L A      N    +R 
Sbjct: 255  PRIGIGCCFWQLGFKDDAKLAWERCLEINPDHKVGNILLGLYYLDASGHIPTNSPDFLRL 314

Query: 207  --KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
              K M E  Q++F++     +     A +F    Q   V+ L   A+  T+     S  +
Sbjct: 315  YKKAMTEYTQKSFKLDKNMPLTCATFAGYFLSRKQLSTVDSLAHKAIQYTDVNAIASDGW 374

Query: 264  YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEK 322
            Y LAR  H  GD E+A  +Y  +            P  +G  Q+ +  GD   A    EK
Sbjct: 375  YLLARKEHYTGDPERASDFYRRADDARGGAERGYLPAKFGAAQLAVLRGDLGEAKLRLEK 434

Query: 323  VLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELL-------RKAAKID 361
            +++    N E +  LG +Y +                +++KA  LL       + + K  
Sbjct: 435  MIQ-QSKNHEAMILLGTLYAEEVFANEEADGKEDKSAEMKKAISLLEGVRGSWKDSKKGM 493

Query: 362  PRDAQAFIDLGEL-----------------------LISSDTGAALDAFKTARTLLKKAG 398
              DA   ++L  L                       +   D    L      R  L+K  
Sbjct: 494  SPDAAVLLNLARLYEHEFPERAQQCLLQVEQLELDQIPEDDYPTDLTDEAEKRAALRKF- 552

Query: 399  EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
              +P ++LNNIG  + +  + E A + F+ ALG  + +   D +     ID  A +    
Sbjct: 553  --LPPQLLNNIGCFYSQSEKHEQASEMFEAALGACMKIGEKDQE-----IDTDALV---- 601

Query: 459  DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                                  T+ FNL R  E       +  +Y  +L ++ DY DA  
Sbjct: 602  ---------------------TTISFNLGRSYESQGLYDRSIEVYEGLLKRHDDYTDART 640

Query: 519  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAK---- 568
            RLA I K R N              N + P+A+S L      DLE++    W   K    
Sbjct: 641  RLAYI-KLRKN-------------PNKEGPDAVSKLYQENPQDLEVRALYGWYMGKVHSR 686

Query: 569  ------------ETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLE 613
                          ++      D  D YA + +GN     A  +R E  + K + +    
Sbjct: 687  KRPQNINEDHEFRHYKHTLQNYDKHDRYALVGMGNLYLIQAREMRRETDSDKAKRSATYS 746

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVW 672
            KA E + + +     N YAA G  + + E K  +  +  +F ++++       ++   V+
Sbjct: 747  KAVEFFEKALSLDPKNAYAAQGIAIAMVEDKKDYKTALGIFVKIRDT------IRDAHVY 800

Query: 673  INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA-------EQWQDCK 725
            +NL H+Y     ++ A++ Y+  L K     D  IL  L RT           + + +  
Sbjct: 801  VNLGHIYAELRQYSKAIENYEAALSKEGKANDPVILACLGRTWLNKGRSEKLLDAYHEAL 860

Query: 726  KSLLRAIHLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSH 783
            K   +A+  AP     +F+      + + +   L + +RT  +++     LE+A+     
Sbjct: 861  KYAQKALEAAPDQVHYKFNVAFVQIQMATTVYGLNENQRTLAQLQEAATGLESAISALDE 920

Query: 784  LSAASNLHLHGFD----------------EKKINTHVEY---CKHLLDAAKIHREAAERE 824
            +++         D                E+ I +  EY    K  L AA   R+A  R+
Sbjct: 921  IASHPQTPYPKHDVEQRANMARNTQRKQLERAIASQKEYEERNKEKLQAALEQRQAELRK 980

Query: 825  EQQNRQ--------RQEAARQAALAEEARRKAEEQKKYLLEKRKLED---EQKRLRQQEE 873
             ++ RQ        RQE  R+       R +   + + + E+R  ED   ++  +    E
Sbjct: 981  REEERQKALEKERERQEKIRK------EREEIAARDREIAERRAEEDRARQEAEMTTDSE 1034

Query: 874  HFQRVKEQWRSSTPASK-----------RRERSENDDDEVG 903
               +VK   R   PA +           R++++E D DE G
Sbjct: 1035 TGDKVK---RKKKPAPRGDGESRPKRGSRKKKAETDGDESG 1072


>gi|262302927|gb|ACY44056.1| SH2 domain binding protein [Ischnura verticalis]
          Length = 174

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 1/174 (0%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGL 160
           A + F  VL     +VPALLG+AC+ F R  +  +L FYK+AL+  P+ CP  +RLG+G 
Sbjct: 1   ADAQFNFVLNQSPGSVPALLGKACIAFGRKDFRGALAFYKKALRTSPAACPATVRLGMGH 60

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
           C  KLG   KAR AF+RAL+LD   V ALV LA++ L   E   I+ G++ + +A+ I  
Sbjct: 61  CFMKLGNQDKARLAFERALELDSSCVGALVGLAILQLNQQETESIKSGVQMLSKAYTIDS 120

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
              M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +G
Sbjct: 121 TNPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQG 174


>gi|262302917|gb|ACY44051.1| SH2 domain binding protein [Eurypauropus spinosus]
          Length = 178

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 107/178 (60%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + F  VL    +N+ +LLG+AC+ F++  +  +L +YK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIASLLGKACIAFSKKDFRGALAYYKKALRTNPKCPAEVRLGMGHC 60

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             KL +  KAR AF RALQLD   V ALV L++ +L       IR G++ + RA+ I   
Sbjct: 61  FMKLNKPDKARLAFDRALQLDANCVGALVGLSMSELNKKTPDSIRSGVQMLSRAYTIDST 120

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y +AR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQMARAFHVQEDYDQA 178


>gi|449542803|gb|EMD33781.1| hypothetical protein CERSUDRAFT_117863 [Ceriporiopsis subvermispora
           B]
          Length = 1127

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 198/891 (22%), Positives = 363/891 (40%), Gaps = 167/891 (18%)

Query: 58  QREKEEHFILATQYYN-----KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA 112
           +R KE+++  A   +N      A   D     + + +G L L+K  + +A  +F+ VL  
Sbjct: 126 ERPKEDYYTDAASLFNLGEKKAAEAGDAGNVLSLLTRGILQLSKRSMSEAQRSFESVLAQ 185

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
              N+ ALLG+A + +   +Y  +L+ ++R LQ+ P C    R+GIGLC + +GQ  KA+
Sbjct: 186 KPTNIVALLGKAKILYATRQYPQALKLFQRVLQLSPQCLPDPRIGIGLCLWAMGQKEKAK 245

Query: 173 QAFQRALQLDPENVEA--LVALAVMDLQANEAAGIRK-------GMEKMQRAFEIYPYCA 223
            A+QR+++++P    A  L+ +  ++   NE     +       G   ++RAF+     A
Sbjct: 246 AAWQRSVEVNPSEWPAQLLLGIEAINTSKNENQSEEERLSEFLLGTRFVERAFKANQTNA 305

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A N L       GQ+   E+L E  +   +     S  Y    R   ++G  + A  +Y
Sbjct: 306 AAANVLCELTIQKGQYKRAEKLAERVIQFADTKTLLSEGYIRAGRITQAEGIAQDAFKHY 365

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV- 342
            A  KE ++P+  I    G+ Q+QLK  +  +A+   + +L+  P    + +A+  +   
Sbjct: 366 -AKAKEGSQPN--IVASVGIAQLQLKNDEIPAAIHTLDTLLQ-QPSGERSAEAIAMLASL 421

Query: 343 ------------QLGQIEKAQELLRKAAKI-----DP--------------------RDA 365
                       Q  + ++A+ELL +  +I     DP                    +D 
Sbjct: 422 RAHPRPGVSSTDQAQEKQRARELLERVCRILHLPEDPHSQTANGSSTPLTRSQRKVAQDV 481

Query: 366 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
              +++ +L    +      A++ A  L +  G   P  ++NN+ V+   +G+   A   
Sbjct: 482 DLHVEIAKLWQGENNDRMERAYQEAARLSEAGGRADP-RIVNNLAVLKHLEGDASQARSL 540

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
           ++ AL D   L    ++  +                                   ++L+N
Sbjct: 541 YEKALTDAAGLDPAVAEGMS----------------------------------TSILYN 566

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVD------------------AYLRLAAIAKAR 527
           LAR  E   + V A   Y  +L ++ +YVD                  A LR A +    
Sbjct: 567 LARAYEDQGEIVMARDAYEKLLNRHPEYVDGESDPCLASLCMYGFRSAAKLRQARVLADM 626

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATL 587
           N    + +L+ ++L       N  +      +++     AK+   +     D  D YA  
Sbjct: 627 NRKDEAHDLIKQSLVSQKSDLNIRAFYTHFLIQSGTPKPAKDFVFSTLKDHDKHDLYALC 686

Query: 588 SLGNWNYFAALRNEKRAP---KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK- 643
           + G   Y  A  +   +P   +      +++ E Y + +        AA G  +V AE  
Sbjct: 687 AAGWIQYHQARESRDSSPPGVQERKRGFQRSAEFYEKALHLDPMCAVAAQGLAIVTAEDA 746

Query: 644 -----------GQFDVSK---------DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQ 682
                      G  +  K         D+F +V+E+ + GSV+        N+ H Y+A+
Sbjct: 747 LGNLGGSLGPMGPDEAQKRIKDARDALDIFAKVRESINDGSVYA-------NMGHCYYAR 799

Query: 683 GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL--------RAIHL 734
             F  A++ Y+   ++FY N D  +LLYL R+ Y A+  +D   S +        +A HL
Sbjct: 800 DEFDRAIESYETASKRFYNNQDVPVLLYLCRSWY-AKANKDQSFSAMATSLQYAQKAYHL 858

Query: 735 APSNYTLRFDAGVAMQKFSASTLQ--KTRRTADEVRSTVAELENAVRVFSHLSAASNLHL 792
            P +  + ++  +  QK +   L     +R+  E+   + +  +A ++F+ L+       
Sbjct: 859 HPWDKAILYNIAMIQQKAAEMLLSVPPAKRSLKELERAIEQAGHAQKLFASLAQ------ 912

Query: 793 HGFDEKKINTHVEYCKHLLDAAKIHREAAER--EEQQNRQRQ-EAARQAAL 840
              DE  +   + Y + + D  + + E+  R  +E    QRQ EA  QA L
Sbjct: 913 ---DESPV---IPYSREIADQRRKYGESMLRRCDEHLAAQRQWEAEAQAKL 957


>gi|393217141|gb|EJD02630.1| TPR-like protein [Fomitiporia mediterranea MF3/22]
          Length = 1112

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 239/1025 (23%), Positives = 411/1025 (40%), Gaps = 183/1025 (17%)

Query: 4    EYFKQGKVEQFRQILE----EGSSPEIDEYYADVRYERIAILNALGVYYTYL--GKIETK 57
            EY K G  E   + LE    EG  P+     AD     I +  A       L   + +  
Sbjct: 63   EYCKMGLYESAEKCLEAVVNEGGYPKSALTPADQLLANIQLARARKAPKIILENARQDNL 122

Query: 58   QREKEEHFILATQYYNKASR------IDMHEP----STWVGKGQLLLAKGEVEQASSAFK 107
             +E  + F     Y+NKA+R      ID  +     +T + +G   LAKG+++ A  AF 
Sbjct: 123  TKEHPKEF-----YHNKAARQLNLGQIDFSDSKYRFNTILIRGIFHLAKGDLDDAMKAFT 177

Query: 108  IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
            +V+     N+ ALLG+A + + R +Y  +L  ++R L++ P      R+GIGLC + + Q
Sbjct: 178  LVINQKPTNIVALLGKARIAYARKQYPQALRTFQRVLELKPDALPDPRIGIGLCFWAMDQ 237

Query: 168  LGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEKMQRAFEI 218
              KA+  +QR+L++ P N  A + L +  + +++              +G +  +RAF++
Sbjct: 238  KVKAKACWQRSLEVHPSNWSACLLLGLEAINSSKNPDDDDTERTESFIRGTKFCERAFKL 297

Query: 219  YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
                A A N L + F   G   +  +L E  +         S  + +  R    +G    
Sbjct: 298  NNRNAAAANVLFDLFLQRGDKKVSLKLAERTIQFAETLALFSAGHIHAGRLAQMEGSSAG 357

Query: 279  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY-PDNC---ETL 334
            A  ++ A++K    P   +    GL Q Q+K  +  +A+   + +++   P  C     L
Sbjct: 358  AMRHFNAALK--GNPKN-VLAAIGLAQTQIKTDEMPAAIHTLDTLMQPPNPQRCLEATVL 414

Query: 335  KALGHIYVQLG--------QIEKAQELLRKAAK----IDP-------------------- 362
             A    Y + G        + +KA++L  +  K     DP                    
Sbjct: 415  LASLRAYPRPGFSSADAAQERQKARDLYEQVLKAMDLFDPAGLNGSGTRTRSKDEAYTHR 474

Query: 363  RDAQAFIDLGELLISSDTGAALDAFKTARTLLK----------KAGEEVPIEVLNNIGVI 412
            +    F D  ELL+ +      +     R LL+          +AG      +LNN+ V+
Sbjct: 475  KAISNFGDDVELLVEAARLWQDENRPRMRRLLEEAVRVVQERVQAGGSPEPRLLNNLAVL 534

Query: 413  HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 472
                GE   A   ++ AL +        S  +  V +  A+                   
Sbjct: 535  KHNAGELAEARTMYEIALTEA-------SSMEGAVGEGMAT------------------- 568

Query: 473  VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 532
                    TVL+NLAR+ E   +T+ A   Y  +L ++ +Y DA +R A +  + +    
Sbjct: 569  --------TVLYNLARVYEDQGETIIAKDAYDKLLGRHPEYNDAKVRQAQLQVSLSRYDD 620

Query: 533  SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW 592
            + E +  AL       N  S L    L +   +K    F   +          +L    W
Sbjct: 621  AHEWLKSALSSQKSNLNLRSALSHF-LISRQQIKLARDFTTTTLKEGASHDVYSLCAAAW 679

Query: 593  NYFAALRNEKRAPKLEAT-----HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 647
             +F   R E R P          H  +A E+Y R +        AA G  +++AE     
Sbjct: 680  TFFNTAR-ENRDPSPAGAADRRKHFIRAAEIYERALQFDPKCAIAAQGLAIIVAEDALGP 738

Query: 648  VSK--------------------DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 687
            V                      D+F +V+E+ + S       V++N+ H YF +  F  
Sbjct: 739  VKAPGVVIQDDAMRRVQGAREALDIFAKVRESMNDS------SVYVNMGHCYFVRDEFDR 792

Query: 688  AMKMYQNCLRKFYYN-TDAQILLYLARTHYE---AEQWQDCKKSLL----RAIHLAPSNY 739
            A++ Y+   ++   +  D  I+  L R  Y     +Q     KS L    RA+HLAP   
Sbjct: 793  AIESYETAAKRASASGPDVTIIHCLCRAWYSKALKDQSFVALKSALSFAQRALHLAPQEK 852

Query: 740  TLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKK 799
               ++  +  QK +   L  +       + ++A+L+   RV  H + A  L      +K 
Sbjct: 853  ASMYNLAMIEQKAAEMLLGTS-----PAKRSLADLK---RVVEHGAHAQQLFASLAADKS 904

Query: 800  INTHVEYCKHLLDAAKIHREAAER--EEQQNRQRQ-EAARQAALAEEARRKAEEQKK--- 853
             N  V Y + + D  + + E+  R  +EQ   Q Q EAA++A LAE  +++ +E++K   
Sbjct: 905  PN--VPYSREIADQRRKYGESILRRADEQVTAQEQHEAAQEARLAEARQKRLDEKRKAAE 962

Query: 854  -YLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKG 912
               L   ++E+  K+L ++ +  +    +W  +         +E+D+DE G   K+ RK 
Sbjct: 963  AAELRAAQIEENAKKLAEERKKAREEVLEWTKNL--------NESDEDEKG---KKSRK- 1010

Query: 913  GKRRK 917
             KR+K
Sbjct: 1011 AKRQK 1015


>gi|254572335|ref|XP_002493277.1| Component of the Paf1p complex [Komagataella pastoris GS115]
 gi|238033075|emb|CAY71098.1| Component of the Paf1p complex [Komagataella pastoris GS115]
 gi|328352706|emb|CCA39104.1| RNA polymerase-associated protein CTR9 homolog [Komagataella
           pastoris CBS 7435]
          Length = 1044

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 205/847 (24%), Positives = 353/847 (41%), Gaps = 136/847 (16%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
           +G G L       ++A   F  +L+    N+ A+LG+A + + R +YS +LE Y++AL +
Sbjct: 149 IGNGVLYAKSRRYDEALKEFDNLLKKKSTNILAILGKAQILYKRQKYSQALELYQKALTI 208

Query: 147 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE---NVEALVALAVMDLQANEA- 202
           +P      RLGIGLC + L     A QA+  +L++ P+   N + L+ LA  D   NE+ 
Sbjct: 209 NPLIVPDPRLGIGLCFWHLNNKQLAEQAWHNSLKVHPQNNLNTKILICLAKFDYCFNESK 268

Query: 203 ------AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA-VTNH 255
                 A  R+ +E +    +      + L  LA+++F    +  VE+L    L   + +
Sbjct: 269 DDDEFTALYRESLEFLHSCLKEDAKHPLLLMVLASYYFSKEDYEKVEKLCNLVLKENSRN 328

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
               S S++ LAR  + K DY +A   +  +    N          G  Q  +   +   
Sbjct: 329 AAFVSASHFWLARVAYHKEDYVQAQKQFKQAEDSQNSN---TLAKLGYAQCLIARNEVGD 385

Query: 316 ALTNFEKVLEIYPD--NCETLKALGHIYVQLGQ-IEKAQELLRKAAKID-----PRDAQA 367
           A    EK  +   D  + E +  LG IY Q G+   KA   L K   +      P   +A
Sbjct: 386 ATIYLEKFFKENQDSKSSEMMLLLGIIYSQSGKSYYKAIIFLEKYVAVCQEENYPILPEA 445

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
           ++ L  +  + D   ALD    A  +L   G++  + VLNN+G+ HF +     +   F 
Sbjct: 446 YLVLSRVYENKDLNVALDYLMKANDIL---GDKANVYVLNNLGIYHFFRNNVSQSSDFFA 502

Query: 428 DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK----VTVL 483
            +L                                        N+V  P NK    +T+ 
Sbjct: 503 QSL-------------------------------------EALNNVS-PQNKEALSITLH 524

Query: 484 FNLARLLEQIHDTVAASVLYRLILFKYQDYVDA---YLRLAAIAKARNNLQLSIELVNE- 539
           +N AR +E++ +   A  LY  ++ K   Y      Y+ L A+    NN     +L+++ 
Sbjct: 525 YNKAR-VEEVSNQSEAEKLYSKLMEKCPGYTSNKIRYIYLLALKSNGNNYADVQQLLDDF 583

Query: 540 --ALKVNGKYPNALSMLG-------DLELKNDDWVKAKETFRAASDATDGKDSYATLSLG 590
              L+V   Y   L   G       DLE ++      K+T        D  D YA LSLG
Sbjct: 584 PSDLEVRSFYGWFLKRYGRKNGLKQDLESQHH-----KDTLI----NYDKHDCYALLSLG 634

Query: 591 NWNYFAALRNEKRAPKLEATHLE-----KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ 645
             N +A +  E +    +   ++     +A + Y +V+     N+YAA G  ++ ++K +
Sbjct: 635 --NIYATIAREMKVTDQKQNEIKRQQYLRAAQFYHKVLSIDPKNIYAAQGIAIIFSDKER 692

Query: 646 FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 705
             ++ ++F +V++       VQ    +INL H +     F  A++ Y   L KF    D+
Sbjct: 693 TGLALEIFKKVRDT------VQDLGTFINLGHCFMEAKQFGKAIESYTIALEKFSNGMDS 746

Query: 706 QILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY------TLRFDAGVAMQKFSAS---- 755
           ++L+ + R  Y    ++    +  +A+ ++   Y       LRF+  +   +F  +    
Sbjct: 747 KLLVLIGRAWYHRGFYEKSMDAYKKALEVSEQAYQLSKLPALRFN--IVFIQFQIADFVK 804

Query: 756 TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAK 815
           +L  T+R    + + ++ L +A++    L+          D K   T           + 
Sbjct: 805 SLPNTQRDLTTLENALSGLNDAIKSLLKLAELEQPPYPSEDLKARATM---------GSN 855

Query: 816 IHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRL-----RQ 870
             R   ER   Q++Q  E + Q  L   ARRK +     L E+++LE EQ+RL     RQ
Sbjct: 856 TLRNQLER-AIQDQQDYEMSIQEKL-RTARRKQQ-----LDEEKRLEQEQRRLEEARKRQ 908

Query: 871 QEEHFQR 877
           + E  +R
Sbjct: 909 EAELIKR 915


>gi|150865668|ref|XP_001384981.2| protein required for normal CLN1 and CLN2 G1 cyclin expression
           [Scheffersomyces stipitis CBS 6054]
 gi|149386924|gb|ABN66952.2| protein required for normal CLN1 and CLN2 G1 cyclin expression
           [Scheffersomyces stipitis CBS 6054]
          Length = 1120

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 185/779 (23%), Positives = 332/779 (42%), Gaps = 123/779 (15%)

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSC 150
           LLL  G  ++A   F  +L  D++N  ALLG+A    N+ + Y+ +L+ Y++ L ++P  
Sbjct: 157 LLLFNGRDDEALDIFDKILRIDQNNCFALLGKARAVLNKTKNYAAALKLYQQVLILNPVI 216

Query: 151 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI----- 205
               R+GIGLC + L     A QA+ RAL++DP N++A V L + + Q      +     
Sbjct: 217 KPDPRIGIGLCFWFLKDDRMAVQAWNRALEIDPTNLKAKVLLNLANFQKTFINSLSDDEF 276

Query: 206 ----RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
               +  + ++    +  P  +  L  LA+++F    + +V  +   A  V N    ++ 
Sbjct: 277 LENYKSCLSQLASNHKESPSESSILLALASYYFSKESYDVVSSIV--AKVVKNMTGDENL 334

Query: 262 SYYN-------------------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + +N                   L R    K ++  A  Y+  ++K +N  +  +    G
Sbjct: 335 TRFNSFSKVSKYQSNILSECAAWLGRIEFVKANFTPASKYFQEAIK-LNDAN--LLAKIG 391

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ---ELLRKAAK 359
           LGQ Q   G    A+  +E +L       E   ALG +Y +    +K Q   ++L +  +
Sbjct: 392 LGQSQYNRGSIEEAVMTYESILRSNVKCLEANYALGLLYAKQKSRKKQQAAIQILERYIR 451

Query: 360 I---------------------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 398
           +                     +P    A++ L +L  ++D   +L+    A    K+ G
Sbjct: 452 LSNNLGLSASHKDEDGSEFLNKEPITLNAYLVLSKLYETTDINQSLNYLNRAIESRKQIG 511

Query: 399 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
           ++VP+EV NNIGV +F K  ++ A   F+ AL                  D   +  QF 
Sbjct: 512 KDVPLEVYNNIGVFNFMKQNYDDAAAHFQTAL------------------DIVKNTDQF- 552

Query: 459 DMQLFHRFENDGN-HVELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 516
                     DG+  V+LP + K+++ +NLAR  ++I +   A  +Y  +L +  +Y  A
Sbjct: 553 -------VSADGDVMVDLPTDLKISLTYNLARS-KEISNESEAIDIYESLLAECPNYFSA 604

Query: 517 YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAK--ETFRA 573
            +R+  +     N   S +L  E +KV      A++   DLE+++   W      +    
Sbjct: 605 KIRILFL-----NCVTSHKLSKEDIKVEIDQLLAVNA-SDLEIRSFYGWFVKNFGKKLGL 658

Query: 574 ASDAT-----------DGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRV 622
           A DA            D  D YA +SL N     A   +  +   +  +  +A EL+ +V
Sbjct: 659 APDADTNHQKDTLVEYDSHDCYALISLANIYCIMARDVKSGSEDKKKKYYVRAVELFAKV 718

Query: 623 IVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 682
           +     N+YAA G  +   E        ++  +++++      +    +++NL HV    
Sbjct: 719 LSVDPKNVYAAQGLAIAYIENKDSVKGLEILRKIRDS------LNDISIYLNLGHVLVES 772

Query: 683 GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLLRAIHLAPSNY 739
            ++   ++ Y+  L +F    D++IL +L R  Y    AE+  +  K  +    LA    
Sbjct: 773 KSYGKGIENYELALGRFTDGKDSRILSFLGRAWYLRASAEKNLNFFKKAIEYTELALDCS 832

Query: 740 T-----LRFD-AGVAMQKFSASTLQKT-RRTADEVRSTVAELENAVRVFSHLSAASNLH 791
           T     +RF+ A +  Q     T Q   +R  DE+ + +A LE+ V + + LS+    H
Sbjct: 833 TGPGSSIRFNLAYLHFQIAELITKQPVGQRKIDEIEAAIAGLESGVAILNELSSEDEKH 891


>gi|262302901|gb|ACY44043.1| SH2 domain binding protein [Carcinoscorpius rotundicauda]
          Length = 149

 Score =  139 bits (351), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 68/147 (46%), Positives = 96/147 (65%)

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
           VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+  P CP A+RLG+G C YKLG+ 
Sbjct: 2   VLNQSPNNIPSLLGKACIAFNKKDFRGALAFYKKALRTSPKCPAAVRLGMGHCFYKLGKH 61

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
            KA+ AF+RALQLDP+ V ALV LAV++L    +  IR G++ + +A+ I     M LN+
Sbjct: 62  EKAKLAFERALQLDPQCVGALVGLAVLELNLKSSESIRNGVQMLSKAYRIDSTNPMVLNH 121

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNH 255
           LANHFFF   +  V+ L   A   T +
Sbjct: 122 LANHFFFKKDYGKVQHLALHAFHNTEN 148


>gi|320587753|gb|EFX00228.1| RNA polymerase 2 transcription elongation factor [Grosmannia
            clavigera kw1407]
          Length = 2074

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 246/1050 (23%), Positives = 437/1050 (41%), Gaps = 191/1050 (18%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
            Y KQGK+E   ++L  G     +    +   E+++I+  L   Y +           G +
Sbjct: 84   YAKQGKIENAIEMLVRGG----NAMQNNNPKEKLSIVACLCWMYLWKSRLAPRVAPEGSL 139

Query: 55   ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS---------- 104
             ++ R KE +  LAT   N+ASRI+   P  ++ +G LLL +  ++Q SS          
Sbjct: 140  VSEARTKEYYLQLATSSLNEASRINPAYPPLFLARGVLLLLRASLQQPSSSAAGGQVDGE 199

Query: 105  -------AFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
                   A K   +A R     N+ AL+G++   ++ G+Y+ +L  Y+  LQ  P+    
Sbjct: 200  KAELLRAAMKSFDDALRVSQGRNMLALMGKSRALYSIGKYAQALSGYQEVLQKAPTLVDP 259

Query: 154  -IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV------MDLQANEAAGIR 206
              R+GIG C ++LG    A+ A++R L+++ ++  A + L +        + +N    IR
Sbjct: 260  DPRIGIGCCFWQLGFKEDAKAAWERCLEINADSKVADILLGLYYLNSSAQVPSNSPDFIR 319

Query: 207  ---KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
               K M E  Q+AF++     +A +  A +F        VE L + A+  T+     S  
Sbjct: 320  LYKKAMTENTQKAFKLDKNMPLACSTFAGYFLSRKSLANVESLAQKAIQNTDVNAIASDG 379

Query: 263  YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFE 321
            +Y LAR  H  GD  +A  YY  S +          P  +G+ Q+ +   D   A    E
Sbjct: 380  WYLLARKAHLDGDLGRAADYYRRSDEARGGTERGYLPAKFGVAQLSVVKNDLGEAKLRLE 439

Query: 322  KVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKI 360
            K+++    + E +  LG +Y +                     +  +E  +   + A K 
Sbjct: 440  KMIQ-QSKSLEAMALLGTLYAEEVFASERSSVKEDKAAEKKKAIALLESVRGAWKDAKKN 498

Query: 361  DPRDAQAFIDLGELLISSDTGAALDAFK-----------------------TARTLLKKA 397
               D+   ++LG L        AL   +                       T R  L+K 
Sbjct: 499  LSPDSAVLLNLGRLYEGDQPDRALQCLQQVEQIELDQIVESEKAPEGTDEATHRESLRKL 558

Query: 398  GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
               +P ++LNN+G  +++  + E A Q+F+ AL   +       K+++   D        
Sbjct: 559  ---LPPQLLNNVGCFYYQADKHEQASQTFELALDACV-------KSQSKGDD-------- 600

Query: 458  KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
                     E D + +       T+ +NL R  E       A  +Y  +L ++  Y +A 
Sbjct: 601  ---------ETDADAL-----VTTISYNLGRSYEVQGVLDKAVEVYEGLLKRHGGYTEAR 646

Query: 518  LRLA--------------AIAKARNNLQLSIELVNEAL------KVNGKYPNALSMLGDL 557
            LRLA              A+AK   +    +E+   AL      KV+ K   A ++  DL
Sbjct: 647  LRLAYMQLRQHPNDGGPDAVAKLYQDNPSDLEV--RALYGWYLGKVHAKKRPA-NIAEDL 703

Query: 558  ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAA--LR--NEKRAPKLEATHLE 613
            EL++         ++      D  D YA + +GN    +A  +R   E+   K  AT+  
Sbjct: 704  ELRH---------YKHTLQNYDKHDRYALVGMGNLYLLSAREMRRETEQERQKRSATY-S 753

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVW 672
            +A E + + +     N YAA G  + L E +  +  +  +F  V++   G+      +V+
Sbjct: 754  RAVEFFEKALQLDPKNGYAAQGIAIALVEDRKDYRNALPIFLSVRDTVRGA------NVY 807

Query: 673  INLAHVYFAQGNFALAMKMYQNCLRK----FYYNTDAQILLYLARTHY---EAEQWQDCK 725
            +NL H+Y     F+ A++ Y+  L K         D  IL  L RT +   + E+  D  
Sbjct: 808  VNLGHIYAELRQFSKAIENYEVALTKEGKGKGAGADTTILSCLGRTWFNKAKVEKDLDAY 867

Query: 726  KSLL----RAIHLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVR 779
            K  L    +A+  AP     +F+      + +++   L +++RT  +++   + LE A++
Sbjct: 868  KEGLECAKKALEAAPEQVHFKFNVAFVQIQLASTIYGLSESQRTLQQLQEAASGLEEAIK 927

Query: 780  VFSHLSAASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAERE-EQQNRQRQEAARQ 837
                ++A         D E++ N      +  L+ A     A++R+ E++N+++  AA +
Sbjct: 928  ALDEIAAHPQTPYPKQDVEQRANMARNTQRRQLERAI----ASQRDYEEKNKEKLAAALE 983

Query: 838  AALAEEARRKAEEQKKYLLE---KRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRER 894
               AE  RR+ E QK   LE   K K+  E++ +  ++      K+    +     RRE 
Sbjct: 984  QRQAELRRREEERQKVVALEQERKEKIRKEREAIAARDRELAE-KQAEGRAEEERSRREV 1042

Query: 895  SENDDDEVGHSEKRRRKGGKRRKKDKSSRS 924
                D E G   KR+RK    + + ++S+ 
Sbjct: 1043 EMTTDSETGEKVKRKRKSAAAKGEGRASKG 1072


>gi|388582667|gb|EIM22971.1| TPR-like protein [Wallemia sebi CBS 633.66]
          Length = 1057

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 181/758 (23%), Positives = 333/758 (43%), Gaps = 107/758 (14%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++GK  L LA+G ++ A S F  +L+    NV AL+G+A V   +  Y+++L  Y+  L+
Sbjct: 109 YLGKASLQLAQGNLDAALSTFNSILKGYSRNVFALMGKARVLHVKRHYAEALRVYQEVLR 168

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL----QANE 201
           + P+     R+GIGLC ++L    +A+ A++R+  L+P      + L ++++    + NE
Sbjct: 169 ISPNLMPDPRIGIGLCFWQLNCPKEAQAAWKRSSHLNPTLYAPQLLLGLLNINEAKKPNE 228

Query: 202 AAGIR-----KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
               R     KG++ +  A+++  Y + A N LA +F    +     +  E A+   +  
Sbjct: 229 PDHYRMKSYSKGIQYVHTAYKLNEYNSNAANVLAYYFLGKRKMPTAIRYAERAIQYADAI 288

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P    ++ NL R +H   + E A   Y  +++    P+  I    G GQ+ L       A
Sbjct: 289 PVLVDAHNNLGRVHHYNKNTEDALRCYKVALER--SPNNII-AQLGRGQLLLTDETLMQA 345

Query: 317 LTNFEKVLE-------IYPDNCETLKAL------GHIYVQLGQ-IEKAQELLRKAAKIDP 362
           + +F+K+++         P+    L  L      G    +L +  E A++L  +  K+  
Sbjct: 346 VHHFDKLVQGQTQKGSPMPEALLILATLRSKVLPGISTSELHKNRESARDLFDRFLKLVM 405

Query: 363 R-------------DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
           +             +A+ FI+L ++    +   + +A++ A TL  + G  +PIE+LNN+
Sbjct: 406 KGSTEEGSLRGLGNEAETFIELAKIWEKDNLQKSSEAYERAYTLRSQQGLSIPIEMLNNV 465

Query: 410 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 469
            V+   +G   +A      A+     LT  +S T  + I                     
Sbjct: 466 AVLTARRGNVANAKAYLLQAVER---LTNGESNTPDFRI--------------------- 501

Query: 470 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 529
              V +  +  T+ +NL RLLE + D   A  LY  +L ++ +Y +  +RLA++      
Sbjct: 502 -KKVNIEQHSCTIKYNLGRLLEDMGDHQEARRLYNEVLIEHPEYFECKVRLASLYIDEKR 560

Query: 530 LQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK----DSYA 585
              +  L+ E L     + N  +      L+ D  V + + F    D T  K    D YA
Sbjct: 561 PDEAHTLLKEVLTTWNDHKNLRAFYTHFLLQYD--VSSAKRF---CDDTLKKIAPNDVYA 615

Query: 586 TLSLGNWNYFAALRNEK-RAPKLEATHLEK----AKELYTRVIVQHTSNLYAANGAGVVL 640
            L +  W  +   R+ + +    EA   E+    A   + + +      +YAA G  + +
Sbjct: 616 -LCVSGWITYIKSRDMRVKTGTSEAKDRERQFREAIIYWEKALRYDPRCVYAAQGLAIAI 674

Query: 641 AEKGQFDVSKDLFTQVQEAASG-------SVFVQMPD------VWINLAHVYFAQGNFAL 687
           AE    D S+    +  E  +        S+F ++ D      V+IN+ H ++AQ  F  
Sbjct: 675 AENVVPDSSRRDKEEPSEEDNAKSRREALSIFTKIRDSLDEACVYINMGHCFYAQDEFDK 734

Query: 688 AMKMYQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSLLRAIHL---APSNYT 740
           A+++Y++ L K   N D   LL+  R +Y    +  ++   +KSL  A      AP + +
Sbjct: 735 AVEVYEHGLSK---NEDTITLLHACRANYSKGVQRSEFHYLEKSLTLAQTASVKAPKDKS 791

Query: 741 LRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 778
           ++++  +  QK     LQ    T  + RS + +L+ A+
Sbjct: 792 IKYNIAMIEQKM----LQVVLDTPSDKRS-LQDLQKAI 824


>gi|346971338|gb|EGY14790.1| tetratricopeptide repeat protein [Verticillium dahliae VdLs.17]
          Length = 1150

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 197/813 (24%), Positives = 327/813 (40%), Gaps = 152/813 (18%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQR----- 59
           Y KQ  ++   ++L  G +   D    +   E+++++  L   + YL K+    R     
Sbjct: 76  YAKQKNIDHAIEMLVRGGNSMRD----NTPREKLSLIGCL--CWMYLWKVREAPRLPPDG 129

Query: 60  ------EKEEHFI-LATQYYNKASRIDMHEPSTWVGKG--QLLLAKGEVEQASSAFKI-- 108
                 + +EH++ LAT   N ASRI+   P  ++ +G  QLL A  ++ +A+   K+  
Sbjct: 130 VPASEAKTKEHYLQLATSTLNNASRINHAFPPLFLARGVLQLLRASLQIPKATGLGKLDN 189

Query: 109 --------VLEADRD--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
                    L+A  D        N+ A++G+A   F+ G++ +SL  Y+  L   P    
Sbjct: 190 EKADLLRAALKAFEDAIRVSQGKNMLAVMGKARALFSLGKFPESLACYQEVLGKMPDLVD 249

Query: 153 A-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGI 205
              R+GIG C ++LG    AR A++R L+++P++    + L +  L A      N    I
Sbjct: 250 PDPRIGIGACFWQLGFKDDARSAWERCLEINPDHKVGNILLGLYYLDASGHVPTNSPDFI 309

Query: 206 R---KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
           R   K M E  Q++F++     +     AN+F    Q   V+ L   A+  T+     S 
Sbjct: 310 RLYKKAMTEYTQKSFKLDKNMPLTCATFANYFLSRKQLGTVDTLAHKAIQYTDVNAIASD 369

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNF 320
            +Y LAR  H +GD  KA  YY  +            P  +G  Q+ +  GD   A    
Sbjct: 370 GWYLLARKEHHEGDPSKASDYYRRADDARGGADRGYLPAKFGAAQLSVMRGDLAEAKLTL 429

Query: 321 EKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAK 359
           EK+++    + E L  LG +Y +                     +G +E  +   R + K
Sbjct: 430 EKMVQ-QSKHHEALVLLGTLYAEEVFANQDLDAKEDKSAETKKAIGLLESVRGAWRDSKK 488

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKAGEE 400
               DA   ++L  L  +     AL        L                    KKA   
Sbjct: 489 NLNPDAAVLLNLARLYEAEHPDKALQCLLQVEQLEMDLVSAADRPPPDTDEAETKKALRR 548

Query: 401 -VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 459
            +P ++LNNIG  + +    E A + F+ AL   + L   D        DA    L    
Sbjct: 549 FLPPQLLNNIGCFYSQSERHEQASELFEAALDACMKLGEKDE-------DADVDALV--- 598

Query: 460 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
                                T+ FNL R  E       A  +Y  +L ++ DY DA +R
Sbjct: 599 --------------------TTISFNLGRSYESRGMLDDAVKVYEELLKRHDDYTDARVR 638

Query: 520 LAAIAKARNNLQLSIELVNEALKVN--------------GKYPNALSMLGDLELKNDDWV 565
           LA I   +   +   E V++  K N              GK P+     G++  ++D++ 
Sbjct: 639 LAYIKLRKFPHKEGPEAVSKLYKENARDLEVRALYGWYLGKVPSR-KRSGNIN-EDDEFR 696

Query: 566 KAKETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRV 622
             K T R      D  D YA +  GN +   A  +R E  + K + + +  KA E + + 
Sbjct: 697 HYKHTLR----DHDKHDRYALVGAGNLHLLTAREMRRESDSDKAKRSAMYTKAVEFFEKA 752

Query: 623 IVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFA 681
           +     N YAA G  + L E +  +  +  +F ++++       V+   V++NL H+Y  
Sbjct: 753 LSLDPLNAYAAQGIAIALVEDRKDYKTALGIFVKIRDT------VKDAHVFVNLGHIYAE 806

Query: 682 QGNFALAMKMYQNCLRKFYYNTDAQILLYLART 714
              ++ A++ Y+  L K   + D  IL  L RT
Sbjct: 807 LRQYSKALENYETALSKEGKSNDPVILSVLGRT 839


>gi|119498583|ref|XP_001266049.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Neosartorya fischeri NRRL 181]
 gi|119414213|gb|EAW24152.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Neosartorya fischeri NRRL 181]
          Length = 1198

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 219/926 (23%), Positives = 375/926 (40%), Gaps = 172/926 (18%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ T+ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 134  GELYTEAKTKDYYLQLATSTLNEASRLNPAFPPLFLARGVLCLLRASLHPPRPVRPGSVD 193

Query: 99   ----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   P  
Sbjct: 194  TSERVESLRQALKCFEESSKAFGGRNVMAILGRARAQYLLGRYAEALEGYQKVLMKMPGL 253

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C ++LG   +A+ A++RAL ++P++  A + LAV  L         + A
Sbjct: 254  TDPDPRIGIGCCLWQLGFKDQAKVAWERALAVNPDSKVANILLAVYYLYDSSRHATTDPA 313

Query: 203  AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G   +  M +  Q+AF++     M      ++F     +  VE L   A+  T+     
Sbjct: 314  FGSLYKVAMTQYTQKAFKLDKEYPMTCGLFGSYFLLRKSYSTVETLARKAIEHTDVMAIA 373

Query: 260  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
            S  +Y L R  H +GD  +A  YY  S +      +   P  +G  Q+Q+   ++  A  
Sbjct: 374  SDGWYLLGRKAHYEGDLARAAEYYSRSDQARGGGDKGYLPAKFGAVQMQVSNRNYDDAKF 433

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKA 357
              EK+++    N E +  LG ++ +                     +  +E  + L +  
Sbjct: 434  RLEKIIQ-QTKNPECMILLGALHAEEVFAAQASGSKEDKSAEAKKAISLLESVRSLWKDE 492

Query: 358  AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE---------------- 400
            AK    D    + L  L        ++        + L +  EE                
Sbjct: 493  AKKVSADESVLVYLSRLYEQVAPEKSMQCLTQLEEMQLAEIAEEERPEGIEDEEELKAVL 552

Query: 401  ---VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
               +P ++LNN+G   ++  + E A   F+ AL        + S+ K   +D  A +   
Sbjct: 553  RTNLPPQLLNNMGCFMYQADKVEQARTLFQAALN-----ACVRSQEKEAELDTDALV--- 604

Query: 458  KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
                                   T+ +NL R  E  +    A  +Y  +L ++ DY +A 
Sbjct: 605  ----------------------TTISYNLGRAYEASNMQDEAKKVYEGLLERHADYTEAN 642

Query: 518  LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASD 576
             R+  IA       L     +E  K   K   A S   +LE++    W  +K   RAA+ 
Sbjct: 643  ARVTYIA-------LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANL 693

Query: 577  ATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKEL 618
            A D +              D Y+   +GN  + A  R+ +R    +        E+A E 
Sbjct: 694  AEDHEQRHYKHTLQYFDKHDRYSLTGMGNV-HLATARDMRRDTDQDKEKRRKMYERAVEF 752

Query: 619  YTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
            + + +     N YAA G  + L + K     +  +F++V++       ++ P V++NL H
Sbjct: 753  FDKALQLDPKNAYAAQGIAIALVDDKKDHAGAVHIFSKVRDT------LRDPSVYLNLGH 806

Query: 678  VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----R 730
            VY     ++ +++ Y+  L K     DAQIL  L R      + E      K+ L    R
Sbjct: 807  VYAELRQYSRSIEHYEAALSKDRAR-DAQILACLGRVWLLKGKQEMNLSAMKTALDYAKR 865

Query: 731  AIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAAS 788
            A  +AP+   L F+      + +  A +L +T++T  +V      L  A+  F  ++   
Sbjct: 866  AHAVAPAQAHLEFNVAFVQNQIASLAYSLPETQKTVQDVEEAAEGLHQAIETFGRIAKVK 925

Query: 789  NL-HLHGFDEKKINTHVEYCKHL------------LDAAKIH--REAAERE----EQQNR 829
            N  +  G  E++ N      K L             +AAK+   REA E E    E++ R
Sbjct: 926  NPPYPAGALEQRANMGKTIIKQLERALQSQKEYEEKNAAKLQQAREAREAEIRKREEEVR 985

Query: 830  QRQEA--ARQAALAEEARRKAEEQKK 853
            + QEA   R+  LAEE +R  EE ++
Sbjct: 986  KAQEAEQERKKKLAEERQRMIEEAQR 1011


>gi|302916809|ref|XP_003052215.1| RNA polymerase II-associated protein [Nectria haematococca mpVI
           77-13-4]
 gi|256733154|gb|EEU46502.1| RNA polymerase II-associated protein [Nectria haematococca mpVI
           77-13-4]
          Length = 1216

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 206/886 (23%), Positives = 356/886 (40%), Gaps = 146/886 (16%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ K++   ++L  G S  I     + R ++++++  L   Y +           G  
Sbjct: 80  YAKQHKIDHAIEMLLRGGS-AIQSNSTNPR-DKVSMICCLCWMYLWKSREAPRVAPDGTR 137

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS----------- 103
            ++ + KE +  LAT   N A+R++   P  ++ +G LLL +  ++  S           
Sbjct: 138 VSEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKH 197

Query: 104 ----SAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
               +A K   +A R     N+ AL+G+A   F+  +Y DSL  Y+  L   P       
Sbjct: 198 ELLKTAVKSFDDALRVSQGKNMLALMGKARALFSMHKYPDSLAIYQDVLHKMPDLVDPDP 257

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--------- 205
           R+GIG C ++LG    A+ A++R L+++P +  A + L +  L A+    +         
Sbjct: 258 RIGIGCCFWQLGFKDDAKMAWERCLEINPNSKVANILLGLYYLDASGHVPVNSDEFLKLY 317

Query: 206 RKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +K M E  Q++F++     +  +  AN+F         ++L   A+  T+     S  +Y
Sbjct: 318 KKAMTEYTQKSFKLDKDLPLTCSTFANYFLSRKAWDNADKLAHKAIQYTDVNAIASDGWY 377

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKV 323
            LAR  H  G+ E+A  YY  +            P  +G+ Q+ +   D   A    EK+
Sbjct: 378 LLARKEHYSGNTERATDYYRRADDARGGTETGYLPAKFGVAQLSVLKNDLGEAKLRLEKM 437

Query: 324 LEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRKA--AKIDPR---- 363
           ++    N E +  LG +Y +                +++KA  LL  A  A  DP+    
Sbjct: 438 IQ-QSKNHEAMILLGTLYAEEVFANQVSDSKEDKSAELKKAITLLEGARNAWKDPKKTLA 496

Query: 364 -DAQAFIDLGELLISSDTGAALDAFKTARTL-------------------LKKA-GEEVP 402
            DA   ++L  L  +     AL   +    L                   +K A  + +P
Sbjct: 497 PDASVLLNLARLYETDHPDKALQCLQQVEQLELDQVPPSERPEDVTDEAEIKAALRKSLP 556

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
            ++LNNIG  H +  + E A   F+ AL   I +   D    T   DA  S         
Sbjct: 557 PQLLNNIGCFHSQAEKHELASDMFEAALSACIKIGEKDPDMDT---DALVS--------- 604

Query: 463 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                             T+ FNLAR  E    T  A  +Y  +L ++ DY DA  RLA 
Sbjct: 605 ------------------TISFNLARSYESRGLTDKAVEVYEGLLARHDDYTDARARLAY 646

Query: 523 IAKARNNLQLSIELV-------NEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS 575
           I   +N  +   + V       N  L+V   Y   L  +   +  ++  +     FR   
Sbjct: 647 IKLRKNPNKEGPDAVAKLYQENNTDLEVRALYGWYLGRVHSRKRPSN--IGEDPEFRHYK 704

Query: 576 DAT---DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHTSN 629
                 D  D +A + +GN     A  +R E  + K + +    KA E + + +     N
Sbjct: 705 HTLQNYDKHDRHALVGMGNLYLIQAREMRRESESDKQKRSATYGKAVEFFEKALSLDPKN 764

Query: 630 LYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 688
            YAA G  + L E K  +  +  +F +V+E    S       +++NL H+Y     ++ A
Sbjct: 765 AYAAQGIAIALVEDKKDYKSALGIFNKVRETLRDS------HLYVNLGHIYAELRQYSKA 818

Query: 689 MKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHLAPSNYTL 741
           ++ Y+  L +     D  IL  L RT         + + +    +   +A+ +AP     
Sbjct: 819 IEHYEIALSRDGKANDPVILACLGRTWLNRGRSERDVDAYNKALECAQKALEVAPEQVHY 878

Query: 742 RFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLS 785
           +F+ A V +Q  +    L + +R+A+++      LE A+     ++
Sbjct: 879 KFNVAFVQIQLVTMIQNLPENKRSAEQLEKAAEGLEAAITSLDEIA 924


>gi|453084022|gb|EMF12067.1| hypothetical protein SEPMUDRAFT_149849 [Mycosphaerella populorum
           SO2202]
          Length = 1218

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 207/897 (23%), Positives = 359/897 (40%), Gaps = 172/897 (19%)

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE-------------- 100
           +T +R KE    LAT   N ASRI    P  ++ +G LLL K  ++              
Sbjct: 142 QTDERLKENWLALATSTLNDASRISPSYPPLFLARGTLLLLKASLQPQKFGPGGEHSDRA 201

Query: 101 ----QASSAFKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-I 154
               QAS  F        + NV A++G+A   F+ G++  +   Y++AL+  P       
Sbjct: 202 DTLKQASKCFDDAYRTSGNKNVLAVMGKAKANFSMGKFDQAYVLYQQALERAPDMVDPDP 261

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAGIR-- 206
           R+GIG C ++LG    AR+A++R+L+L+  +  A + L +  L       +N+ A     
Sbjct: 262 RIGIGACLWQLGHKENAREAWERSLELNESSTIANILLGLYHLDQSSHYNSNDPAFAPIY 321

Query: 207 -KGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
            K M    Q AF++    A+       +F        V++L   A+  T+   + S  +Y
Sbjct: 322 GKAMTTYTQTAFKLDAMHALTCATFGGYFLLRRAWVNVDRLARRAIEHTDVNASASDGWY 381

Query: 265 NLARSYHSKGDYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            LAR  H +GD +KA  YY  A +        ++   +G  Q++  + D+  A    EK+
Sbjct: 382 LLARKEHYEGDLQKAQDYYNKADLARGGDERGYLPAKFGAAQLKTLMNDYDGAKFRLEKM 441

Query: 324 LEIYPDNCETLKALGHIYVQ-------LGQIEKAQELLRKAA---------------KID 361
           +     + E +  LG ++ +        G  E+  +  +KA                KI 
Sbjct: 442 VSTN-KSVEAMTLLGILHAEDVFAKQVTGLKEETADSRKKAIALLESVRVAWRDSKKKIS 500

Query: 362 PRDAQAFIDLGELLISSDTGAAL--------------------DAFKTARTLLKKAGEEV 401
           P D+   ++L  L        AL                    +  +    +L    E +
Sbjct: 501 P-DSAVLLNLARLYEQEQPEKALACLQHVEQLELDELDDEDLPEGMEDETAILAAKREML 559

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
             ++LNNIG  HF+      A ++F+ AL   + ++  D+   T   DA  S        
Sbjct: 560 SPQLLNNIGCFHFQAERLSQARENFQAALRSSVSISNKDASVDT---DALVS-------- 608

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                              T+ +NL R+ E       A  +Y+ +L ++ DYVDA +R+A
Sbjct: 609 -------------------TISYNLGRVYEAEGIEDEAEKIYKSLLDRHPDYVDANIRMA 649

Query: 522 AIAKARNNLQLS---IELVN------EALKVNGKYPN-----ALSMLGDLELKNDDWVKA 567
            +A   + ++      +LV+      EA  ++G Y N      L++  D E K+      
Sbjct: 650 YLALRSDPVKGGEAIKQLVDADPGNLEARALHGWYLNRTKKRTLALNEDQEQKH------ 703

Query: 568 KETFRAASDATDGKDSYATLSLGNWNYFAA---LRNEKRAPKLEATHLEKAKELYTRVIV 624
              ++      D  D Y+   +GN N   A    R+  +     +    +A E + +V+ 
Sbjct: 704 ---YKHTLMTYDKHDIYSLTGMGNLNLVIAREMPRDTDQHKDRRSKTYSRAMEFFDKVLT 760

Query: 625 QHTSNLYAANGAGV-VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 683
               N +AA G G+ ++ E+     +  +F++V+E+      V+   V INL HV+    
Sbjct: 761 LDPKNAFAAQGVGIGMVEERKDTAAAIHIFSKVRES------VKDASVHINLGHVFCELK 814

Query: 684 NFALAMKMYQNCLRKFYYNTDAQILLYL-------ARTHYEAEQWQDCKKSLLRAIHLAP 736
            F+ +++ Y+  L K     D QI+  L        RT    E ++       +A+  +P
Sbjct: 815 QFSRSIENYELALVK-SREKDPQIMACLGRAWLMRGRTEKNLEHYKMSLDYSQQALAHSP 873

Query: 737 SNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD 796
            N   +F+      + +   +     T  E   T+ ++E A +              G D
Sbjct: 874 ENINFKFNVAFVQIQIAQQMI-----TQPEANKTLVDVEAANK--------------GLD 914

Query: 797 EKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKK 853
           E  I + +E  K        H    + E++ N  R    RQ A A E  R+AE ++K
Sbjct: 915 E-AIESFIEIAKGPSPPFPRH----DIEQRANMGRNTMKRQLATATE--RQAEYERK 964


>gi|255731362|ref|XP_002550605.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240131614|gb|EER31173.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 1081

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 202/860 (23%), Positives = 355/860 (41%), Gaps = 133/860 (15%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH 64
           Y K GKVEQ  + ++   +    +    + +E   I       + YL  + +   EK+++
Sbjct: 67  YAKIGKVEQSMKFIKAALNLSYFDNNDRITFESFII-------WLYLQNV-SLGIEKDQN 118

Query: 65  FILATQYYNKAS-RID-------MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN 116
             LA Q  +K + +I        ++  S  +    L L +   + AS   + +L+ +  N
Sbjct: 119 LSLARQGISKLTFKIQNDRETRPLNSISNLLCSAVLNLYESNNDHASEIAEQILKINSSN 178

Query: 117 VPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
             ALL +A    N+ + Y+ +L+ +++ L ++P      RLGIGLC + L     A +++
Sbjct: 179 AFALLVKAQSLLNKSKNYAHALKLFQQVLIMNPMMKPDPRLGIGLCFWFLKDEKLAIKSW 238

Query: 176 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC------------- 222
           +R+L+LDP N+++ + L +          +       +   E Y  C             
Sbjct: 239 ERSLELDPSNIKSRIFLNLAKFHNTFTTSLSD-----EEFLENYKNCLQELSKIQKSSIN 293

Query: 223 -AMALNYLANHFFFTGQHFLVEQLTETAL-AVTN----------------HGPTKSHSYY 264
            A  L  LA H+F   ++ +V ++ +  + +VT                      S    
Sbjct: 294 DATVLLTLAAHYFARDEYDVVSKIIKKIVTSVTGSDNIIKFSISSSISKYEASVLSQCAT 353

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
            L R   SKGD+ ++  Y+  ++K +N     I    GLGQ Q   G    A+  FEK+L
Sbjct: 354 WLGRIEFSKGDFTQSSKYFQDAIK-LNDND--IVAKLGLGQSQYNRGSLEEAIITFEKIL 410

Query: 325 EIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI----------DPRDAQAFIDL 371
               +  E   +LG +Y +    +K   A  +L +  ++          +P    A++ L
Sbjct: 411 NSNVNCLEANYSLGVLYSKQDSPKKKELAISVLERYIRLSNNRGDSSSREPVATNAYLIL 470

Query: 372 GELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            EL     D   AL     A    K   ++V +EV NNIGV  F K  + SA ++F+ A 
Sbjct: 471 SELYEDKGDMNQALTYLNKAVEARKYVDKDVSLEVYNNIGVFQFMKQNYTSASENFQVA- 529

Query: 431 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN-KVTVLFNLARL 489
                           V   + +  +  D  L          ++LP + K T+ FNLAR 
Sbjct: 530 ----------------VDKLNGAEFKSPDGDLL---------IDLPQDLKTTLTFNLART 564

Query: 490 LEQIHDTVAASVLYRLILFKYQDYVDAYLR---LAAIAKARNNLQLSIELVNEALKVNGK 546
            ++I +   A  +Y  ++ +  +Y  A LR   L  I   +   ++  E ++E L++N  
Sbjct: 565 -KEITNQDEALTIYESLIQECPNYFSAKLRILFLNCITDKKTKQEIKDE-IDELLQLNAS 622

Query: 547 YPNALSMLG--------DLELKND-DWVKAKETFRAASDATDGKDSYATLSLGNWNYFAA 597
                S  G         + L  D D    KET        D  D YA +SL N  Y   
Sbjct: 623 DLEIRSFYGWFIKNFAKKVHLSQDADTTLQKETLME----YDSHDCYALISLANI-YCIM 677

Query: 598 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
            R+ K + + +  +  +A EL+T+V+     N+YAA G  +   E  Q +   D+  +++
Sbjct: 678 ARDTKGSEEKKRKYYLRAIELFTKVLSLDPKNVYAAQGLAIAFIENKQANKGLDILRKIR 737

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 717
           ++ +         V++NL HV     NF  A++ Y+  L ++    D +IL +L R  Y 
Sbjct: 738 DSLND------ISVYLNLGHVLCQLKNFGKAIENYELALARYTDGNDTKILSFLGRAWYL 791

Query: 718 AEQWQDCKKSLLRAIHL---------APSNYTLRFDAG-VAMQKFSASTLQKT-RRTADE 766
               +     L +A+           A S   L ++   +  Q   A T Q   +R  +E
Sbjct: 792 RGTSESNLPYLKQALEYAQKAVEASKASSKAALLYNVSFIQFQIADAITKQSVNQRVVEE 851

Query: 767 VRSTVAELENAVRVFSHLSA 786
           +   +A L   + + + LS+
Sbjct: 852 IEEAIAGLNAGIDILTKLSS 871


>gi|365758512|gb|EHN00349.1| Ctr9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1042

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 195/834 (23%), Positives = 355/834 (42%), Gaps = 154/834 (18%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQ++ +N  
Sbjct: 182 YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDPKMAIRSWQRALQINSKNTS 241

Query: 188 ALVALAVMDLQAN-----------EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 236
           A + + + +   +           EA G  K +  +   F       + L  L  +++F 
Sbjct: 242 ASILVLLGEFHDSLIDSSNDDTFKEAFG--KALIDLNTVFSENQNHPVLLTLLQTYYYFK 299

Query: 237 GQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMAS 286
           G +       +T L + +H   K          S S +   R++++ GDY K+ + +  S
Sbjct: 300 GDY-------QTVLNIYHHKIIKMSPLIAKTVLSESSFWCGRAHYALGDYRKSFIMFQES 352

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL-- 344
           +K   K  + +    GLGQ Q+K      ++  FE    +Y  N E+L+ L +I   L  
Sbjct: 353 LK---KNEDNLLAKLGLGQTQIKNNLLEESIITFEN---LYKTN-ESLQELNYILGMLYA 405

Query: 345 -----GQI-------------EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 386
                G++             EKA + L +  K+        I     L+ S    + + 
Sbjct: 406 GKALDGKMIKNLPAKELSNLNEKALKYLERYLKLALAMKNQLIISRAYLVISQLYESQNQ 465

Query: 387 FKTARTLLKKAGE--------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 438
           +KT+   L KA E        E+P+++LNN+   HF  G+   A   FK A         
Sbjct: 466 YKTSLDYLSKALEEMEFINQNEIPLDILNNLACYHFINGDLTKADDLFKQA--------- 516

Query: 439 LDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA 498
              K K    D S +                          VT+ +N+AR  E+ +D   
Sbjct: 517 ---KAKVSETDESVN--------------------------VTLEYNIARTNEK-NDPEK 546

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLG 555
              +Y  I   +  Y+ A +R   +  A++ ++   +S+++ N+ L+VN       S  G
Sbjct: 547 FECIYSQITSAHPSYIAARIRNLYLKFAQSKIEDSAMSVQM-NDLLEVNKSDLEIRSFYG 605

Query: 556 DLELKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----LRNEKRAPK 606
              LKN    K  E     +  T       D+YA +SL N     A      RN K   K
Sbjct: 606 -WYLKNSKERKNNEKSTTHNKETLVKYSSHDAYALISLANLYVTIARDGKKSRNPKEQEK 664

Query: 607 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 666
            + ++L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++       
Sbjct: 665 SKHSYL-KAIQLYQKVLQVDPYNIFAAQGVAIIFAESKRLGPALEILRKVRDSLDNE--- 720

Query: 667 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT-DAQILLYLARTHY-------EA 718
              DV +NLAH Y     F  A++ Y+  L+KF   T    IL  L R  Y         
Sbjct: 721 ---DVQLNLAHCYLEMREFGKAIENYELALKKFDNETMRPHILNLLGRAWYARGMKERSV 777

Query: 719 EQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRS 769
             +Q   ++   A+ L       S +       +A+ +F  A TL+++    RT  +++ 
Sbjct: 778 SFFQKALENAKTALELFVKQSTKSKFIHSVKFNIALLQFQIAETLRRSNPKFRTVQQIKD 837

Query: 770 TVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR 829
           ++  LE  + +F  L+   + ++    ++++   ++  +  + +A + R   E+EE +  
Sbjct: 838 SLEGLEEGLSLFKDLNDLKDFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEYE-- 892

Query: 830 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR--QQEEHFQRVKEQ 881
                  Q+A  +EAR+  EE +    E+ K E+E KRL+  +Q E ++R++++
Sbjct: 893 -----KEQSAKIDEARKTLEENEVKEQERIKQEEETKRLKLEKQAEEYKRLQDE 941


>gi|154299238|ref|XP_001550039.1| hypothetical protein BC1G_11797 [Botryotinia fuckeliana B05.10]
          Length = 904

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 194/860 (22%), Positives = 340/860 (39%), Gaps = 166/860 (19%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE---- 60
           Y KQ KV+   ++L +G S            ER+++L  L   Y +  K   + R     
Sbjct: 85  YAKQKKVDHAIEMLTKGQSA-----MRGGNKERLSMLTCLCWMYLWKSKEAPRHRPDSVE 139

Query: 61  -------KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL-------------AKGEVE 100
                  KE+   +AT   N ASRI+   P  ++ +G L L             A G ++
Sbjct: 140 HGEEIKTKEDWLKMATSNLNDASRINPSFPPLFLARGVLQLLRASTRPFPRNNTAPGALD 199

Query: 101 Q--------ASSAFKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
                    A  +F+  ++A    N+ A+LG+A   ++ G+Y+++LE Y+ AL+  P   
Sbjct: 200 PEKAELLRGAQKSFEDAIKASHGRNMLAVLGKARAAYSMGKYAEALEGYQEALRSMPDLV 259

Query: 152 GA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANEAAG---- 204
               R+GIG C ++LG    A+ A++R+L+++P++  A + LA   +D  A+        
Sbjct: 260 DPDPRIGIGCCFWQLGFKEDAKAAWERSLEINPDSKVANILLAQFYLDQSAHVPTNSPEF 319

Query: 205 ---IRKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
               +K M E  QR+++      +     A +F        VE L + A+  T+     S
Sbjct: 320 IQLYKKAMTEYTQRSYKADKDMPLTCATFAGYFLSRKSMPNVEALAQKAIQYTDVNAIAS 379

Query: 261 HSYYNLARSYHSKGDYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
             +Y LAR  H   +YEKA  YY  A          ++   +G  Q+ +  GDF  A   
Sbjct: 380 DGWYLLARKEHFDDNYEKALDYYGRADDARGGADRGYMPAKFGAAQLSVLKGDFGEAKLR 439

Query: 320 FEKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAA 358
            EK+++    N E +  LG +Y +                     +G +E  +   +   
Sbjct: 440 LEKIIQ-QSKNIEAMILLGTLYAEEVFSSQESGVKEDKTTEYKKAVGYLENVRTAWKDPK 498

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL----------LKKAGEEVPI----- 403
           K    DA   ++L  L  +     +L   +    +           ++ G+EV       
Sbjct: 499 KNLVPDASVLLNLARLYETEQPEKSLQCLQQVEQIEFDQIPAADKPEETGDEVAYKNTMR 558

Query: 404 -----EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
                ++LNNIG  +++  +++ A + F+ AL        + +  K   +D  A +    
Sbjct: 559 ENLSPQLLNNIGCFYYQSEKYDLAREMFQAALN-----ACVKAGEKLEGMDTDALV---- 609

Query: 459 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                                 T+ FNL R  E       A  +Y  +L ++ DY DA  
Sbjct: 610 ---------------------TTISFNLGRTYEASGMPDEAKTVYEGLLGRHSDYTDAKT 648

Query: 519 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAASDA 577
           RLA IA  R+  +   + V+   K +           DLE++    W   +   R  S  
Sbjct: 649 RLAYIALRRDRTEEGPKAVSALYKESS---------ADLEVRALYGWYLGRMHSRKRSSN 699

Query: 578 T----------------DGKDSYATLSLGNWNYFAA---LRNEKRAPKLEATHLEKAKEL 618
                            D  D YA + +GN N  AA    R+ +   +  +    KA E 
Sbjct: 700 VNEDPEYRHYKHTLQQYDKHDRYALIGMGNLNLMAAREMRRDSESDKQARSKTYTKAVEF 759

Query: 619 YTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
           + + +     + YAA G  + L E K     +  +F +V++       V+ P V++NL H
Sbjct: 760 FDKALQLDPKSAYAAQGIAIALVEDKKDSKTALPIFLKVRDT------VKDPSVFVNLGH 813

Query: 678 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL-------LR 730
           ++     ++ A++ Y+  L K   + D+ IL  L RT     +      S        L+
Sbjct: 814 IFAESRQYSKAIEHYEAALTKDRAH-DSHILTCLGRTWLSKGKGDKSLSSFKSALDYSLK 872

Query: 731 AIHLAPSNYTLRFDAGVAMQ 750
           A+ ++P     +F+    ++
Sbjct: 873 ALEISPEQVHYKFNVAFKLR 892


>gi|330939475|ref|XP_003305852.1| hypothetical protein PTT_18803 [Pyrenophora teres f. teres 0-1]
 gi|311316946|gb|EFQ86039.1| hypothetical protein PTT_18803 [Pyrenophora teres f. teres 0-1]
          Length = 1181

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 208/875 (23%), Positives = 349/875 (39%), Gaps = 181/875 (20%)

Query: 37  RIAILNALGVYYTYLGKIETKQREKEEH---------FIL--ATQYYNKASRIDMHEPST 85
           R++ILN  G+ + YL K     R + ++         F +  AT   N ASRI    P  
Sbjct: 109 RLSILN--GLCWLYLQKCREAPRVRPQNADGDTKLKEFWIQSATGVLNDASRISPSHPPL 166

Query: 86  WVGKGQLLLAKGEVE-------------------QASSAFKIVLEADRD-NVPALLGQAC 125
           ++ +G L L K  ++                   QA+  F+  L A    N+ A +G+A 
Sbjct: 167 FLARGVLYLLKASLQGPATAAGSTVSPERMETLKQAAKCFEDALRASGGRNLMAKMGKAR 226

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           V ++ G+++D+L+ Y+  L+  P    P   R+GIG C ++LG   +A  A+QR+L+L+P
Sbjct: 227 VNYSMGKWADALKGYQNILESSPDLLDPDP-RIGIGCCFWQLGHKDEAATAWQRSLELNP 285

Query: 184 ENVEALVALAVMDLQANE---------AAGIRKGM-EKMQRAFEI---YPY-CAMALNYL 229
           ++  AL+ L + + Q            AA I+K   E +Q A ++   YP  CA    YL
Sbjct: 286 KSKIALILLGIYNFQLTANLSTADPKFAALIKKATGEYIQPALKLDNQYPLSCATVGTYL 345

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
                        E +   A+ +T+     S  +Y  A+  H + +   A  YY  S + 
Sbjct: 346 ----VLRKDLGKTEDVARRAIELTDTNAIASDGWYLRAKIAHQQENTALAAEYYSKSDQA 401

Query: 290 INKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LG 345
                    P  +GL Q+ + + ++  A    EK+L+  P N E    LG +Y +     
Sbjct: 402 RGGEERGYIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-NVEAQTLLGTLYAEDVFAA 460

Query: 346 QIEKAQE----LLRKAAKI---------DPR-----DAQAFIDLGELLISSDTGAALDAF 387
           Q  K+ E     L+KA K          DP+     D    ++L  L  +     +L   
Sbjct: 461 QNSKSTEDKSAELKKALKYLESVQNAWKDPKKKVIPDQSVLLNLARLYETDHPEKSLKCL 520

Query: 388 KTARTL---------LKKAGEEVP-----------IEVLNNIGVIHFEKGEFESAHQSFK 427
           +    +           +  EE P            ++LNN+G   F+   +  A + F+
Sbjct: 521 EEVELMEIEAIPEEDYPEGLEEGPELKAALRQLLPPQLLNNMGCFQFQAERYVRAQELFQ 580

Query: 428 DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLA 487
            AL        ++++ +   ID  A +                          ++ FNLA
Sbjct: 581 VALN-----ACVNAENRDNTIDTDALV-------------------------TSISFNLA 610

Query: 488 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 547
           R  E   +   A  +Y  +L ++ DYVDA +RL  IA            + +  K N   
Sbjct: 611 RTYEAEGEPEEAKKVYNSLLQRHPDYVDARIRLTYIALREKPQDEGPRAMKDLFKENEDN 670

Query: 548 PNALSMLGDLELKNDDWVKAKETFRAASDA--------------TDGKDSYATLSLGNWN 593
               ++ G        W   K   R  + A              +D  D Y+ + +GN  
Sbjct: 671 VEVRALYG--------WYVNKSKKRTQNFAADEEQRLYKHTLQKSDKHDRYSLMGMGNI- 721

Query: 594 YFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDV 648
           + A  R   R+ + +        E+A E + +V+     N YAA G  + L E K  +  
Sbjct: 722 HLAIAREMPRSSEQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIALVEDKKDYST 781

Query: 649 SKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQIL 708
           +  +FT+V+E       ++   V++NL H Y     +A A++ Y+  L +  +N + +IL
Sbjct: 782 ALQIFTKVKET------LKDHSVFVNLGHTYCEIKQYARAIENYEAALSRSQHN-NPKIL 834

Query: 709 LYLARTHYEAEQWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST-- 756
             L R  Y   + +          D  K  L+A   APS+   +F+  VA  +F  +T  
Sbjct: 835 ACLGRAWYLRARHERSVAGIRTALDYSKQALKA---APSDLNSQFN--VAFVQFQIATMV 889

Query: 757 --LQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
             L + +RT  EV      L  A+     L+   N
Sbjct: 890 YSLLEQQRTLQEVDEAATGLTEAIEALEKLAKEEN 924


>gi|1732237|gb|AAB38704.1| CTR9 [Saccharomyces cerevisiae]
 gi|392296359|gb|EIW07461.1| Ctr9p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1077

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 202/884 (22%), Positives = 366/884 (41%), Gaps = 161/884 (18%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------ 342
               K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y       
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKAFDA 423

Query: 343  ----------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
                      Q    EKA + L +  K+        +     L+ S      + +KT+  
Sbjct: 424  KTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKTSLD 483

Query: 393  LLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
             L KA E       E+P+EVLNN+   HF  G+F  A   FK A              K 
Sbjct: 484  YLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------------KA 529

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
             V D   S+                         +T+ +N+AR  E+ +D   +  +Y  
Sbjct: 530  KVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESIYSQ 564

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLELKND 562
            +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   LKN 
Sbjct: 565  VTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYLKNS 622

Query: 563  DWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----LRNEKRAPKLEATHLE 613
               K  E     +  T    +  D+YA +SL N     A      RN K   K + ++L 
Sbjct: 623  KERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQEKSKHSYL- 681

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
            KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          DV +
Sbjct: 682  KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------DVQL 735

Query: 674  NLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQDCK 725
            NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q   
Sbjct: 736  NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 726  KSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAELEN 776
            ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  L+ 
Sbjct: 796  ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEGLKE 855

Query: 777  AVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE---QQNRQRQE 833
             + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   +Q+ +  E
Sbjct: 856  GLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEKEQSAKIDE 912

Query: 834  AAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEEHF--------- 875
            A +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E           
Sbjct: 913  ARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQEREAMAISEHNVKD 972

Query: 876  ----QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
                     ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 973  DSDLSDKDNEYDEEKPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|349581028|dbj|GAA26186.1| K7_Ctr9p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1077

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 202/884 (22%), Positives = 366/884 (41%), Gaps = 161/884 (18%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------ 342
               K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y       
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKAFDA 423

Query: 343  ----------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
                      Q    EKA + L +  K+        +     L+ S      + +KT+  
Sbjct: 424  KTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKTSLD 483

Query: 393  LLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
             L KA E       E+P+EVLNN+   HF  G+F  A   FK A              K 
Sbjct: 484  YLSKALEEMEFTKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------------KA 529

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
             V D   S+                         +T+ +N+AR  E+ +D   +  +Y  
Sbjct: 530  KVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESIYSQ 564

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLELKND 562
            +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   LKN 
Sbjct: 565  VTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYLKNS 622

Query: 563  DWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEKRAPKLEATHLE 613
               K  E     +  T    +  D+YA +SL N     A      RN K   K + ++L 
Sbjct: 623  KERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQEKSKHSYL- 681

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
            KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          DV +
Sbjct: 682  KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------DVQL 735

Query: 674  NLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQDCK 725
            NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q   
Sbjct: 736  NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 726  KSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAELEN 776
            ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  L+ 
Sbjct: 796  ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEGLKE 855

Query: 777  AVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE---QQNRQRQE 833
             + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   +Q+ +  E
Sbjct: 856  GLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEKEQSAKIDE 912

Query: 834  AAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEEHF--------- 875
            A +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E           
Sbjct: 913  ARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQEREAMAISEHNVKD 972

Query: 876  ----QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
                     ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 973  DSDLSDKDNEYDEEKPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|2565014|gb|AAB81882.1| Cdp1p [Saccharomyces cerevisiae]
          Length = 1077

 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 202/884 (22%), Positives = 366/884 (41%), Gaps = 161/884 (18%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------ 342
               K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y       
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKAFDA 423

Query: 343  ----------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
                      Q    EKA + L +  K+        +     L+ S      + +KT+  
Sbjct: 424  KTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVVSRAYLVISQLYELQNQYKTSLD 483

Query: 393  LLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
             L KA E       E+P+EVLNN+   HF  G+F  A   FK A              K 
Sbjct: 484  YLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------------KA 529

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
             V D   S+                         +T+ +N+AR  E+ +D   +  +Y  
Sbjct: 530  KVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESIYSQ 564

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLELKND 562
            +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   LKN 
Sbjct: 565  VTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYLKNS 622

Query: 563  DWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----LRNEKRAPKLEATHLE 613
               K  E     +  T    +  D+YA +SL N     A      RN K   K + ++L 
Sbjct: 623  KERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQEKSKHSYL- 681

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
            KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          DV +
Sbjct: 682  KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------DVQL 735

Query: 674  NLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQDCK 725
            NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q   
Sbjct: 736  NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 726  KSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAELEN 776
            ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  L+ 
Sbjct: 796  ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEGLKE 855

Query: 777  AVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE---QQNRQRQE 833
             + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   +Q+ +  E
Sbjct: 856  GLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEKEQSAKIDE 912

Query: 834  AAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEEHF--------- 875
            A +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E           
Sbjct: 913  ARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQEREAMAISEHNVKD 972

Query: 876  ----QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
                     ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 973  DSDLSDKDNEYDEEKPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|70998646|ref|XP_754045.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus fumigatus Af293]
 gi|66851681|gb|EAL92007.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus fumigatus Af293]
          Length = 1195

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 261/1128 (23%), Positives = 444/1128 (39%), Gaps = 216/1128 (19%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ T+ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 131  GELYTEAKTKDYYLQLATSTLNEASRLNPAFPPLFLARGVLCLLRASLHPPRPVRPGSVD 190

Query: 99   ----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A+LG++  ++  GRY+++LE Y++ L   P  
Sbjct: 191  TSERVESLRQALKCFEESSKAFGGRNVMAILGRSRAQYLLGRYAEALEGYQKVLMKMPGL 250

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C ++LG   +A+ A++RAL ++P++  A + LAV  L         + A
Sbjct: 251  TDPDPRIGIGCCLWQLGFKDQAKVAWERALAVNPDSKVANILLAVYYLYDSSRHATTDPA 310

Query: 203  AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G   +  M +  Q+AF++     M      ++F     +  VE L   A+  T+     
Sbjct: 311  FGSLYKVAMTQYTQKAFKLDKEDPMTCALFGSYFLLRKSYSTVETLARKAIEHTDVMAIA 370

Query: 260  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
            S  +Y L R  H +GD  +A  YY  + +      +   P  +G  Q+Q+   ++  A  
Sbjct: 371  SDGWYLLGRKAHYEGDLARAAEYYSRADQARGGGDKGYLPAKFGTVQMQVSNQNYDDAKF 430

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKA 357
              EK+++    N E +  LG ++ +                     +  +E  + L +  
Sbjct: 431  RLEKIIQ-QTKNPECMILLGALHAEEVFAAQASGSKEDKSAEAKKAISLLESVRSLWKDE 489

Query: 358  AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE---------------- 400
            AK    D    + L  L        ++        + L +  EE                
Sbjct: 490  AKKVSPDESVLVYLSRLYEQVAPEKSMQCLTQLEEMQLAEIAEEEHPEGIKDEEELKAVL 549

Query: 401  ---VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
               +P ++LNN+G   ++  + E A   F+ AL        + S+ K   +D  A +   
Sbjct: 550  RTNLPPQLLNNMGCFMYQADKVEQARTLFQAALN-----ACVRSQEKEAQLDTDALV--- 601

Query: 458  KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
                                   T+ +NL R  E  +    A  +Y  +L ++ DY +A 
Sbjct: 602  ----------------------TTISYNLGRAYEASNMQDEAKKVYEGLLERHADYTEAN 639

Query: 518  LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASD 576
             RL  IA       L     +E  K   K   A S   +LE++    W  +K   RAA+ 
Sbjct: 640  ARLTYIA-------LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANL 690

Query: 577  ATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKEL 618
            A D +              D Y+   +GN  + A  R+ +R    +        E+A E 
Sbjct: 691  AEDHEQRHYKHTLQYFDKHDRYSLTGMGNV-HLATARDMRRDTDQDKEKRRKMYERAVEF 749

Query: 619  YTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
            + + +     N YAA G  + L + +     +  +F++V++       ++ P V++NL H
Sbjct: 750  FDKALQLDPKNAYAAQGIAIALVDDRKDHAAAVHIFSKVRDT------LRDPSVYLNLGH 803

Query: 678  VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----R 730
            VY     ++ +++ Y+  L K     DAQIL  L R      + E      K+ L    R
Sbjct: 804  VYAELRQYSRSIEHYEAALSKDRAR-DAQILACLGRVWLLKGKQEMNLSAMKTALDYAKR 862

Query: 731  AIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAAS 788
            A  +AP+   L F+      + +  A +L +T++T  +V      L  A+  F  ++   
Sbjct: 863  AHAVAPTQVHLEFNVAFVQNQIASLAYSLPETQKTVQDVEEAAEGLHQAIETFGRIAKVK 922

Query: 789  NL-HLHGFDEKKINTHVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAAR 836
            N  +  G  E++ N      K L  A +  +E           A E  E + R+R+E  R
Sbjct: 923  NPPYPAGALEQRANMGKTIIKQLERALQSQKEYEEKNAAKLQQAREAREAEIRKREEEVR 982

Query: 837  QAALAEEARRK--AEEQKKYLLEKRKLEDEQKR---------LRQQEEHFQRV------- 878
            +A  AE+ R+K  AEE+++ + E ++L +++           +    E   +V       
Sbjct: 983  KAQEAEQERKKKLAEERQRMIEEAQRLAEQRAEEERAREEAEMTVDSETGDKVRRRKKTS 1042

Query: 879  --------KEQWRSSTPASKRRERSENDDDEVGHSEKRRR----KGGKRRKKDKSSR--- 923
                    ++ + S    S+R    E   +     +KRRR     GGK + K KSS    
Sbjct: 1043 SKRKKKRAEDDFISDGETSRRTVSGEPGSEGEAAPKKRRRLERRSGGKAQSKYKSSEIVE 1102

Query: 924  -SHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSD 982
             S  E E  EA   D  +E  D  A               DDVE+    R A      +D
Sbjct: 1103 DSDVEDEVHEAAAGDSDQEMRDTGA---------------DDVEDVVQRRRAKVTRRIAD 1147

Query: 983  VDDEMAPSITAARRRRALSES----DDDEPFERQLRDNTDELQDSDGE 1026
             DDE       A     + E+    DDD  F    R    E+++ D E
Sbjct: 1148 EDDEDEEEEQGAASAGPVHENQEDDDDDGLFNESPRGEDLEMKEDDEE 1195


>gi|159126221|gb|EDP51337.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus fumigatus A1163]
          Length = 1195

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 261/1128 (23%), Positives = 444/1128 (39%), Gaps = 216/1128 (19%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ T+ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 131  GELYTEAKTKDYYLQLATSTLNEASRLNPAFPPLFLARGVLCLLRASLHPPRPVRPGSVD 190

Query: 99   ----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A+LG++  ++  GRY+++LE Y++ L   P  
Sbjct: 191  TSERVESLQQALKCFEESSKAFGGRNVMAILGRSRAQYLLGRYAEALEGYQKVLMKMPGL 250

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C ++LG   +A+ A++RAL ++P++  A + LAV  L         + A
Sbjct: 251  TDPDPRIGIGCCLWQLGFKDQAKVAWERALAVNPDSKVANILLAVYYLYDSSRHATTDPA 310

Query: 203  AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G   +  M +  Q+AF++     M      ++F     +  VE L   A+  T+     
Sbjct: 311  FGSLYKVAMTQYTQKAFKLDKEDPMTCALFGSYFLLRKSYSTVETLARKAIEHTDVMAIA 370

Query: 260  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
            S  +Y L R  H +GD  +A  YY  + +      +   P  +G  Q+Q+   ++  A  
Sbjct: 371  SDGWYLLGRKAHYEGDLARAAEYYSRADQARGGGDKGYLPAKFGTVQMQVSNQNYDDAKF 430

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKA 357
              EK+++    N E +  LG ++ +                     +  +E  + L +  
Sbjct: 431  RLEKIIQ-QTKNPECMILLGALHAEEVFAAQASGSKEDKSAEAKKAISLLESVRSLWKDE 489

Query: 358  AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE---------------- 400
            AK    D    + L  L        ++        + L +  EE                
Sbjct: 490  AKKVSPDESVLVYLSRLYEQVAPEKSMQCLTQLEEMQLAEIAEEEHPEGIEDEEELKAVL 549

Query: 401  ---VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
               +P ++LNN+G   ++  + E A   F+ AL        + S+ K   +D  A +   
Sbjct: 550  RTNLPPQLLNNMGCFMYQADKVEQARTLFQAALN-----ACVRSQEKEAQLDTDALV--- 601

Query: 458  KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
                                   T+ +NL R  E  +    A  +Y  +L ++ DY +A 
Sbjct: 602  ----------------------TTISYNLGRAYEASNMQDEAKKVYEGLLERHADYTEAN 639

Query: 518  LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASD 576
             RL  IA       L     +E  K   K   A S   +LE++    W  +K   RAA+ 
Sbjct: 640  ARLTYIA-------LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANL 690

Query: 577  ATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKEL 618
            A D +              D Y+   +GN  + A  R+ +R    +        E+A E 
Sbjct: 691  AEDHEQRHYKHTLQYFDKHDRYSLTGMGNV-HLATARDMRRDTDQDKEKRRKMYERAVEF 749

Query: 619  YTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
            + + +     N YAA G  + L + +     +  +F++V++       ++ P V++NL H
Sbjct: 750  FDKALQLDPKNAYAAQGIAIALVDDRKDHAAAVHIFSKVRDT------LRDPSVYLNLGH 803

Query: 678  VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----R 730
            VY     ++ +++ Y+  L K     DAQIL  L R      + E      K+ L    R
Sbjct: 804  VYAELRQYSRSIEHYEAALSKDRAR-DAQILACLGRVWLLKGKQEMNLSAMKTALDYAKR 862

Query: 731  AIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAAS 788
            A  +AP+   L F+      + +  A +L +T++T  +V      L  A+  F  ++   
Sbjct: 863  AHAVAPTQVHLEFNVAFVQNQIASLAYSLPETQKTVQDVEEAAEGLHQAIETFGRIAKVK 922

Query: 789  NL-HLHGFDEKKINTHVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAAR 836
            N  +  G  E++ N      K L  A +  +E           A E  E + R+R+E  R
Sbjct: 923  NPPYPAGALEQRANMGKTIIKQLERALQSQKEYEEKNAAKLQQAREAREAEIRKREEEVR 982

Query: 837  QAALAEEARRK--AEEQKKYLLEKRKLEDEQKR---------LRQQEEHFQRV------- 878
            +A  AE+ R+K  AEE+++ + E ++L +++           +    E   +V       
Sbjct: 983  KAQEAEQERKKKLAEERQRMIEEAQRLAEQRAEEERAREEAEMTVDSETGDKVRRRKKTS 1042

Query: 879  --------KEQWRSSTPASKRRERSENDDDEVGHSEKRRR----KGGKRRKKDKSSR--- 923
                    ++ + S    S+R    E   +     +KRRR     GGK + K KSS    
Sbjct: 1043 SKRKKKRAEDDFISDGETSRRTVSGEPGSEGEAAPKKRRRLERRSGGKAQSKYKSSEIVE 1102

Query: 924  -SHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSD 982
             S  E E  EA   D  +E  D  A               DDVE+    R A      +D
Sbjct: 1103 DSDVEDEVHEAAAGDSDQEMRDTGA---------------DDVEDVVQRRRAKVTRRIAD 1147

Query: 983  VDDEMAPSITAARRRRALSES----DDDEPFERQLRDNTDELQDSDGE 1026
             DDE       A     + E+    DDD  F    R    E+++ D E
Sbjct: 1148 EDDEDEEEEQGAASAGPVHENQEDDDDDGLFNESPRGEDLEMKEDDEE 1195


>gi|151945491|gb|EDN63732.1| cln three (cln3) requiring protein [Saccharomyces cerevisiae YJM789]
 gi|190407208|gb|EDV10475.1| CTR9 protein [Saccharomyces cerevisiae RM11-1a]
 gi|207341482|gb|EDZ69529.1| YOL145Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256270134|gb|EEU05364.1| Ctr9p [Saccharomyces cerevisiae JAY291]
          Length = 1077

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 202/892 (22%), Positives = 367/892 (41%), Gaps = 177/892 (19%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------ 342
               K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y       
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKAFDA 423

Query: 343  ----------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
                      Q    EKA + L +  K+        +     L+ S      + +KT+  
Sbjct: 424  KTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKTSLD 483

Query: 393  LLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
             L KA E       E+P+EVLNN+   HF  G+F  A   FK A              K 
Sbjct: 484  YLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------------KA 529

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
             V D   S+                         +T+ +N+AR  E+ +D   +  +Y  
Sbjct: 530  KVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESIYSQ 564

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLE---- 558
            +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N           DLE    
Sbjct: 565  VTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK---------SDLEIRSF 614

Query: 559  ----LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----LRNEKRAP 605
                LKN    K  E     +  T    +  D+YA +SL N     A      RN K   
Sbjct: 615  YAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQE 674

Query: 606  KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 665
            K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +V+++      
Sbjct: 675  KSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE-- 731

Query: 666  VQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------E 717
                DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y        
Sbjct: 732  ----DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERS 787

Query: 718  AEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVR 768
               +Q   ++   A+ L     + S +       +A+  F  A TL+++    RT  +++
Sbjct: 788  VNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIK 847

Query: 769  STVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE--- 825
             ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   
Sbjct: 848  DSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEK 904

Query: 826  QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEEHF- 875
            +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E   
Sbjct: 905  EQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQEREAMA 964

Query: 876  ------------QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
                             ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 965  ISEHNVKDDSDLSDKDNEYDEEKPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|323307343|gb|EGA60622.1| Ctr9p [Saccharomyces cerevisiae FostersO]
          Length = 1040

 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 205/899 (22%), Positives = 372/899 (41%), Gaps = 191/899 (21%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI- 347
               K  + +    GLGQ Q+K      ++  FE    +Y  N E+L+ L +I   LG + 
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFEN---LYKTN-ESLQELNYI---LGMLY 416

Query: 348  ----------------------EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 385
                                  EKA + L +  K+        +     L+ S      +
Sbjct: 417  AGKAFDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQN 476

Query: 386  AFKTARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 438
             +KT+   L KA E       E+P+EVLNN+   HF  G+F  A   FK A         
Sbjct: 477  QYKTSLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------- 527

Query: 439  LDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA 498
                 K  V D   S+                         +T+ +N+AR  E+ +D   
Sbjct: 528  -----KXKVXDKDESV------------------------NITLEYNIARTNEK-NDCEK 557

Query: 499  ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLG 555
            +  +Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N           
Sbjct: 558  SESIYSQVXSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK---------S 607

Query: 556  DLE--------LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----L 598
            DLE        LKN    K  E     +  T    +  D+YA +SL N     A      
Sbjct: 608  DLEIRSFYAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKS 667

Query: 599  RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
            RN K   K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +V++
Sbjct: 668  RNPKEQEKSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRD 726

Query: 659  AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY- 716
            +          DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y 
Sbjct: 727  SLDNE------DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYA 780

Query: 717  ------EAEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR--- 761
                      +Q   ++   A+ L     + S +       +A+  F  A TL+++    
Sbjct: 781  RAIKERSVNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKF 840

Query: 762  RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAA 821
            RT  +++ ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R   
Sbjct: 841  RTVQQIKDSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLN 897

Query: 822  EREE---QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLR 869
            E+EE   +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L 
Sbjct: 898  EQEEFEKEQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLI 957

Query: 870  QQEEHF-------------QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
            Q+ E                    ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 958  QEREAMAISEHNVKDDSDLSDKDNEYDEEKPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|190347172|gb|EDK39403.2| hypothetical protein PGUG_03501 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1074

 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 209/867 (24%), Positives = 365/867 (42%), Gaps = 142/867 (16%)

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGI 158
           +QA   +  + +AD  N  ALLG+A +  N+ + Y   L  Y++ L ++P      R+GI
Sbjct: 155 DQAWEIYDGIWKADPKNCFALLGKAHIALNKTKNYKSGLRLYQQVLLLNPIMKPDPRIGI 214

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           G+C + L     A  +++RAL++D  N  A + + +   Q N+A       E    +   
Sbjct: 215 GICAWMLNDQEMAVNSWKRALEIDSSNTAAKLLITLS--QFNDAFNKSLSDESFITS--- 269

Query: 219 YPYCAMALNYL-------------ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS--- 262
           Y  C + L  L              ++++   Q+ +VE++    L     G +K HS   
Sbjct: 270 YKECLIKLRDLPHSSEDTTILLAFVSYYYSKEQYDIVEKICNNILQ-KYSGSSKVHSSKL 328

Query: 263 --YYN---------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
             Y +         L R   +KGDY ++   +  +++  +     +    GLG  Q   G
Sbjct: 329 TPYQSKALSTANSWLGRVSFAKGDYTQSQRSFHEAIRLDDNN---LIAKLGLGLSQANRG 385

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL--------LRKAAKIDPR 363
               A+  FE VL+  P   E   +LG  Y +  +  K Q+L        LR +  +   
Sbjct: 386 SNEEAIITFESVLKTNPKCLEVNYSLGIFYSK-SKSRKKQDLAISILERYLRLSNNLGSN 444

Query: 364 DAQAFIDLGELLISSDTGAALDAFKT------------ARTLLKKA-------GEEVPIE 404
              +  D  E  +SS     L+A  T            + T L KA       G  VPIE
Sbjct: 445 PTASKKDDDESSLSSKEPIVLNALLTLSRLYEGRDLNQSLTYLSKAIESRTQVGLSVPIE 504

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 464
           V NN+GV++F K   + A ++F+ A+ +       +S+ K+  I        F D+ L  
Sbjct: 505 VYNNLGVMNFFKNNLDEAKENFEFAVQN----IRKESEEKSDPI--------FDDLSL-- 550

Query: 465 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
                           T+ +NLAR  +++ D  AA  +Y+ +  +  +Y  A LRL  + 
Sbjct: 551 ----------------TIDYNLARS-QEVSDEKAAISIYKSVTERSSNYFSASLRLLFLD 593

Query: 525 KARNN---------LQLSIELVNEA-LKVNGKYPNALSMLGD-LELKND-DWVKAKETFR 572
               N             +   N A L++   Y       G  + +K D D    K+T  
Sbjct: 594 CVSTNESTKEQIRERIEELLEENPANLEIRSFYGWFAKTFGKRIGMKQDADTEHQKKTLV 653

Query: 573 AASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK----AKELYTRVIVQHTS 628
                 D  DSYA LSL N  Y    R+ K +    A   +K    A EL+T+VI   + 
Sbjct: 654 E----YDSHDSYALLSLANI-YCIMARDVKGSGSAVAEKRKKYYIRAIELFTKVISVDSK 708

Query: 629 NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 688
           N+YAA G  +V  E        ++  +++++      +    V++NL HV      F+ +
Sbjct: 709 NVYAAQGLAIVYIENKDSQKGLEILRKIRDS------LNDISVYLNLGHVLLELKQFSKS 762

Query: 689 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAP--------SNYT 740
           ++ Y+  L +F   TD++IL +L R  Y     +     L +A+  A         S  +
Sbjct: 763 IENYEIALVRFTSGTDSKILSFLGRAWYMRGLAEKDLFYLKKALDYAQEAQKQSGGSQAS 822

Query: 741 LRFDAGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD 796
           LRF+  +A  +F      + +   +R  D+++  +  L  A+   + L++    H   + 
Sbjct: 823 LRFN--IAYVQFQIAEFITKIAVEQRNVDDIKRAIEGLNEAIETLNSLASDDEAH-PPYP 879

Query: 797 EKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL-AEEARRKAEEQKKYL 855
           + ++ +        L A +++    E EE  N+   + A    L  EEA ++ EE++  +
Sbjct: 880 KSELKSRANLGTTTL-ANRLNTCLEETEEYINKVENKLAEAKRLRQEEAAKRLEEEQNRI 938

Query: 856 LEKRKLEDE--QKRLRQQEEHFQRVKE 880
           L +++ E+E  ++R + QE+  Q V+E
Sbjct: 939 LRQKQAEEELAKERAKLQEQAQQWVEE 965


>gi|226294355|gb|EEH49775.1| tetratricopeptide repeat protein [Paracoccidioides brasiliensis
           Pb18]
          Length = 1247

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 202/858 (23%), Positives = 342/858 (39%), Gaps = 188/858 (21%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ + K+ +   AT   N+ASR++   P  ++ +G L L +               
Sbjct: 131 GQLVSEAKTKDFYLQAATSILNEASRLNPAFPPLFLARGVLSLLRASLHPPARAIRPGTV 190

Query: 99  -----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                VE    A K   E+ +     NV A+LG+A   +  GRY+++LE Y+  L   P+
Sbjct: 191 DTSERVESLRQALKCFDESAKAFGNRNVMAILGRARAHYMLGRYAEALEGYQEVLMKMPN 250

Query: 150 C--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANE 201
              P   R+GIG C ++L    +A+ A+ RAL L+PE+  A + L    L        N+
Sbjct: 251 MRDPDP-RIGIGCCLWQLDFKEQAKSAWTRALALNPESKAANILLGAYYLYDSSRHATND 309

Query: 202 AA--GIRK--GMEKMQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAV 252
            +   I K    +  Q+A+++   YP  CAM   Y     F   +HF  VE L   A+ +
Sbjct: 310 PSFGSIYKLAMTQYTQKAYKLDKEYPITCAMFGGY-----FLLRKHFPTVEALARKAIEL 364

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLG 311
           T+     S  +Y LAR  H +G+  KA  YY  S +      +   P  +G  Q+Q++ G
Sbjct: 365 TDVNAIASDGWYLLARKEHFEGEASKANEYYSRSDQARGGSDKGYLPAKFGAVQMQVQTG 424

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRKA 357
           D+  A    EK+++    N E++  LG +  +                ++ KA  LL   
Sbjct: 425 DYDGAKFRLEKIIQ-QTKNPESMTLLGALLAEEVFAAEASPLKEDKSAELRKAISLLESV 483

Query: 358 --------AKIDPRDAQAFIDLGEL-----------------------LISSDTGAALDA 386
                    ++ P D    + L  L                       +  +D    +D 
Sbjct: 484 RASWKDEKKRLSP-DESVLLYLARLYENNAPDKSMQCLQQVEQMQLGQIPDTDRPEDIDD 542

Query: 387 FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 446
            +T   LL+   E +  ++LNN+G   +   + E A   F+ AL        + S+ K  
Sbjct: 543 EETMTNLLR---ENLSPQLLNNMGCFLYHAEKVEQARHMFQTALN-----ACVKSREKDD 594

Query: 447 VIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLI 506
             D  A +                          T+ +NLAR  E       A  +Y  +
Sbjct: 595 TTDTDALV-------------------------TTISYNLARTYEAASMPDEAKKVYEGL 629

Query: 507 LFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD--- 563
           L ++ DY +A  RL  IA       L     +E        P  ++ L +LE  N +   
Sbjct: 630 LERHNDYTEANARLTYIA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRA 675

Query: 564 ---WVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPK 606
              W  +K   R  + A D +              D Y+   +GN  Y  A R+ +R  +
Sbjct: 676 LFGWYLSKSKRRVTNIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTE 734

Query: 607 LEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAAS 661
            +        EKA E + + +     N YAA G  + L  ++  +  +  +FT+V++   
Sbjct: 735 QDKEKRRKMYEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDYTTAVQIFTRVRDT-- 792

Query: 662 GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQW 721
               ++   V++NL HVY     F  +++ Y+  L K   + D QIL  L R        
Sbjct: 793 ----LRDASVYLNLGHVYAELRQFTRSIENYEAALSKDRQH-DTQILACLGRVWLLKGMQ 847

Query: 722 Q----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRS 769
           +          DC +   RA  +AP    L F+      + +    +L +T++T  +V++
Sbjct: 848 EKSLAAMNTALDCTQ---RARAIAPEQIHLEFNVAFVQNQIALLVISLPETQKTLRDVQA 904

Query: 770 TVAELENAVRVFSHLSAA 787
               L+ A+  F+ +S A
Sbjct: 905 ASKGLDEAISTFTQISKA 922


>gi|225685042|gb|EEH23326.1| tetratricopeptide repeat protein [Paracoccidioides brasiliensis
           Pb03]
          Length = 1252

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 202/858 (23%), Positives = 342/858 (39%), Gaps = 188/858 (21%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ + K+ +   AT   N+ASR++   P  ++ +G L L +               
Sbjct: 131 GQLVSEAKTKDFYLQAATSILNEASRLNPAFPPLFLARGVLSLLRASLHPPARAIRPGTV 190

Query: 99  -----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                VE    A K   E+ +     NV A+LG+A   +  GRY+++LE Y+  L   P+
Sbjct: 191 DTSERVESLRQALKCFDESAKAFGNRNVMAILGRARAHYMLGRYAEALEGYQEVLMKMPN 250

Query: 150 C--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANE 201
              P   R+GIG C ++L    +A+ A+ RAL L+PE+  A + L    L        N+
Sbjct: 251 MRDPDP-RIGIGCCLWQLDFKEQAKSAWTRALALNPESKAANILLGAYYLYDSSRHATND 309

Query: 202 AA--GIRK--GMEKMQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAV 252
            +   I K    +  Q+A+++   YP  CAM   Y     F   +HF  VE L   A+ +
Sbjct: 310 PSFGSIYKLAMTQYTQKAYKLDKEYPITCAMFGGY-----FLLRKHFPTVEALARKAIEL 364

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLG 311
           T+     S  +Y LAR  H +G+  KA  YY  S +      +   P  +G  Q+Q++ G
Sbjct: 365 TDVNAIASDGWYLLARKEHFEGEASKANEYYSRSDQARGGSDKGYLPAKFGAVQMQVQTG 424

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRKA 357
           D+  A    EK+++    N E++  LG +  +                ++ KA  LL   
Sbjct: 425 DYDGAKFRLEKIIQ-QTKNPESMTLLGALLAEEVFAAEASPLKEDKSAELRKAISLLESV 483

Query: 358 --------AKIDPRDAQAFIDLGEL-----------------------LISSDTGAALDA 386
                    ++ P D    + L  L                       +  +D    +D 
Sbjct: 484 RASWKDEKKRLSP-DESVLLYLARLYENNAPDKSMQCLQQVEQMQLGQIPDTDRPEDIDD 542

Query: 387 FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 446
            +T   LL+   E +  ++LNN+G   +   + E A   F+ AL        + S+ K  
Sbjct: 543 EETMTNLLR---ENLSPQLLNNMGCFLYHAEKVEQARHMFQTALN-----ACVKSREKDD 594

Query: 447 VIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLI 506
             D  A +                          T+ +NLAR  E       A  +Y  +
Sbjct: 595 TTDTDALV-------------------------TTISYNLARTYEAASMPDEAKKVYEGL 629

Query: 507 LFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD--- 563
           L ++ DY +A  RL  IA       L     +E        P  ++ L +LE  N +   
Sbjct: 630 LERHSDYTEANARLTYIA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRA 675

Query: 564 ---WVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPK 606
              W  +K   R  + A D +              D Y+   +GN  Y  A R+ +R  +
Sbjct: 676 LFGWYLSKSKRRVTNIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTE 734

Query: 607 LEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAAS 661
            +        EKA E + + +     N YAA G  + L  ++  +  +  +FT+V++   
Sbjct: 735 QDKEKRRKMYEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDYTTAVQIFTRVRDT-- 792

Query: 662 GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQW 721
               ++   V++NL HVY     F  +++ Y+  L K   + D QIL  L R        
Sbjct: 793 ----LRDASVYLNLGHVYAELRQFTRSIENYEAALSKDRQH-DTQILACLGRVWLLKGMQ 847

Query: 722 Q----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRS 769
           +          DC +   RA  +AP    L F+      + +    +L +T++T  +V++
Sbjct: 848 EKSLAAMNTALDCTQ---RARAIAPEQIHLEFNVAFVQNQIALLVISLPETQKTLRDVQA 904

Query: 770 TVAELENAVRVFSHLSAA 787
               L+ A+  F+ +S A
Sbjct: 905 ASKGLDEAISTFTQISKA 922


>gi|323352275|gb|EGA84810.1| Ctr9p [Saccharomyces cerevisiae VL3]
          Length = 1040

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 205/899 (22%), Positives = 372/899 (41%), Gaps = 191/899 (21%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI- 347
               K  + +    GLGQ Q+K      ++  FE    +Y  N E+L+ L +I   LG + 
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFEN---LYKTN-ESLQELNYI---LGMLY 416

Query: 348  ----------------------EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 385
                                  EKA + L +  K+        +     L+ S      +
Sbjct: 417  AGKAFDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQN 476

Query: 386  AFKTARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 438
             +KT+   L KA E       E+P+EVLNN+   HF  G+F  A   FK A         
Sbjct: 477  QYKTSLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------- 527

Query: 439  LDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA 498
                 K  V D   S+                         +T+ +N+AR  E+ +D   
Sbjct: 528  -----KAKVSDKDESV------------------------NITLEYNIARTNEK-NDCEK 557

Query: 499  ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLG 555
            +  +Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N           
Sbjct: 558  SESIYSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK---------S 607

Query: 556  DLE--------LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----L 598
            DLE        LKN    K  E     +  T    +  D+YA +SL N     A      
Sbjct: 608  DLEIRSFYAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKS 667

Query: 599  RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
            RN K   K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +V++
Sbjct: 668  RNPKEQEKSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRD 726

Query: 659  AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY- 716
            +          DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y 
Sbjct: 727  SLDNE------DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYA 780

Query: 717  ------EAEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR--- 761
                      +Q   ++   A+ L     + S +       +A+  F  A TL+++    
Sbjct: 781  RAIKERSVNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKF 840

Query: 762  RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAA 821
            RT  +++ ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R   
Sbjct: 841  RTVQQIKDSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLN 897

Query: 822  EREE---QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLR 869
            E+EE   +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L 
Sbjct: 898  EQEEFEKEQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLI 957

Query: 870  QQEEHF-------------QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
            Q+ E                    ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 958  QEREAMAISEHNVKDDSDLSDKDNEYDEEKPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|330443717|ref|NP_014496.2| Ctr9p [Saccharomyces cerevisiae S288c]
 gi|347595802|sp|P89105.3|CTR9_YEAST RecName: Full=RNA polymerase-associated protein CTR9; AltName:
            Full=Centromere-binding factor 1-dependent protein 1;
            AltName: Full=Cln three-requiring protein 9
 gi|329138967|tpg|DAA10640.2| TPA: Ctr9p [Saccharomyces cerevisiae S288c]
          Length = 1077

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 201/884 (22%), Positives = 365/884 (41%), Gaps = 161/884 (18%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------ 342
               K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y       
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKAFDA 423

Query: 343  ----------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
                      Q    EKA + L +  K+        +     L+ S      + +KT+  
Sbjct: 424  KTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKTSLD 483

Query: 393  LLKKAGEE-------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
             L KA EE       +P+EVLNN+   HF  G+F  A   FK A              K 
Sbjct: 484  YLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------------KA 529

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
             V D   S+                         +T+ +N+AR  E+ +D   +  +Y  
Sbjct: 530  KVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESIYSQ 564

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLELKND 562
            +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   LKN 
Sbjct: 565  VTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYLKNS 622

Query: 563  DWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEKRAPKLEATHLE 613
               K  E     +  T    +  D+YA +SL N     A      RN K   K + ++L 
Sbjct: 623  KERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQEKSKHSYL- 681

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
            KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          DV +
Sbjct: 682  KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------DVQL 735

Query: 674  NLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQDCK 725
            NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q   
Sbjct: 736  NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795

Query: 726  KSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAELEN 776
            ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  L+ 
Sbjct: 796  ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEGLKE 855

Query: 777  AVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE---QQNRQRQE 833
             + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   +Q+ +  E
Sbjct: 856  GLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEKEQSAKIDE 912

Query: 834  AAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEEHF--------- 875
            A +   +  L E+   K EE+ + L LEK     RKL+DE ++L Q+ E           
Sbjct: 913  ARKILEENELKEQGWMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQEREAMAISEHNVKD 972

Query: 876  ----QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
                     ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 973  DSDLSDKDNEYDEEKPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|259149343|emb|CAY86147.1| Ctr9p [Saccharomyces cerevisiae EC1118]
 gi|323346661|gb|EGA80945.1| Ctr9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 1077

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 202/892 (22%), Positives = 367/892 (41%), Gaps = 177/892 (19%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------ 342
               K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y       
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKAFDA 423

Query: 343  ----------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
                      Q    EKA + L +  K+        +     L+ S      + +KT+  
Sbjct: 424  KTAKNTSAKEQSNLNEKALKYLERYLKLTFATKNQLVISRAYLVISQLYELQNQYKTSLD 483

Query: 393  LLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
             L KA E       E+P+EVLNN+   HF  G+F  A   FK A              K 
Sbjct: 484  YLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------------KA 529

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
             V D   S+                         +T+ +N+AR  E+ +D   +  +Y  
Sbjct: 530  KVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESIYSQ 564

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLE---- 558
            +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N           DLE    
Sbjct: 565  VTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK---------SDLEIRSF 614

Query: 559  ----LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----LRNEKRAP 605
                LKN    K  E     +  T    +  D+YA +SL N     A      RN K   
Sbjct: 615  YAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQE 674

Query: 606  KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 665
            K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +V+++      
Sbjct: 675  KSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE-- 731

Query: 666  VQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------E 717
                DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y        
Sbjct: 732  ----DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERS 787

Query: 718  AEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVR 768
               +Q   ++   A+ L     + S +       +A+  F  A TL+++    RT  +++
Sbjct: 788  VNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIK 847

Query: 769  STVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE--- 825
             ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   
Sbjct: 848  DSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEK 904

Query: 826  QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEEHF- 875
            +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E   
Sbjct: 905  EQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQEREAMA 964

Query: 876  ------------QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
                             ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 965  ISEHNVKDDSDLSDKDNEYDEEKPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|295660519|ref|XP_002790816.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226281369|gb|EEH36935.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1683

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 235/996 (23%), Positives = 405/996 (40%), Gaps = 204/996 (20%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ ++ + K+ +   AT   N+ASR++   P  ++ +G L L +               
Sbjct: 565  GQLVSEAKTKDFYLQAATSILNEASRLNPAFPPLFLARGVLSLLRASLHPPARTIRPGTV 624

Query: 99   -----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                 VE    A K   E+ +     NV A+LG+A   +  GRY+++LE Y+  L   P+
Sbjct: 625  DTSERVESLRQALKCFDESAKAFGNRNVMAILGRARAHYMLGRYAEALEGYQEVLMKMPN 684

Query: 150  C--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANE 201
               P   R+GIG C ++L    +A+ A+ RAL L+PE+  A + L    L        N+
Sbjct: 685  MRDPDP-RIGIGCCLWQLDFKEQAKSAWTRALALNPESKAANILLGAYYLYDSSRHATND 743

Query: 202  AA--GIRK--GMEKMQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAV 252
             +   I K    +  Q+A+++   YP  CAM   Y     F   +HF  VE L   A+ +
Sbjct: 744  PSFGSIYKLAMTQYTQKAYKLDKEYPITCAMFGGY-----FLLRKHFPTVEALARKAIEL 798

Query: 253  TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLG 311
            T+     S  +Y LAR  H +G+  KA  YY  S +      +   P  +G  Q+Q++ G
Sbjct: 799  TDVNAIASDGWYLLARKEHFEGEASKANEYYSRSDQARGGSDKGYLPAKFGAVQMQVQTG 858

Query: 312  DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL-------LRKAA------ 358
            D+  A    EK+++    N E++  LG +  +     +A  L       LRKA       
Sbjct: 859  DYDGAKFRLEKIIQ-QTKNPESMTLLGALLAEEVFAAEASPLKEDKSAELRKAISLLESV 917

Query: 359  ---------KIDPRDAQAFIDLGEL-----------------------LISSDTGAALDA 386
                     ++ P D    + L  L                       +  +D    +D 
Sbjct: 918  RASWKDEKKRLSP-DESVLLYLARLYENSAPDKSMQCLQQVEQMQLGQIPDTDRPEDIDD 976

Query: 387  FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 446
             +T   LL+   E +  ++LNN+G   +   + E A   F+ AL        + S+ K  
Sbjct: 977  EETMTNLLR---ENLSPQLLNNMGCFLYHAEKVEQARHMFQTALN-----ACVKSREKDD 1028

Query: 447  VIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLI 506
              D  A +                          T+ +NLAR  E       A  +Y  +
Sbjct: 1029 TTDTDALV-------------------------TTISYNLARTYEAASMPDEAKKVYEGL 1063

Query: 507  LFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD--- 563
            L ++ DY +A  RL  IA       L     +E        P  ++ L +LE  N +   
Sbjct: 1064 LERHSDYTEANARLTYIA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRA 1109

Query: 564  ---WVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPK 606
               W  +K   R  + A D +              D Y+   +GN  Y  A R+ +R  +
Sbjct: 1110 LFGWYLSKSKKRVTNIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTE 1168

Query: 607  LEA----THLEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAAS 661
             +        EKA E + + +     N YAA G  + L + +  +  +  +FT+V++   
Sbjct: 1169 QDKEKRRKMYEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDYTTAVQIFTRVRDT-- 1226

Query: 662  GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQIL-----LYLARTHY 716
                ++   V++NL HVY     F  +++ Y+  L K     D QIL     ++L R  +
Sbjct: 1227 ----LRDASVYLNLGHVYAELRQFTRSIENYEAALSK-DRQRDTQILACLGRVWLLRGMH 1281

Query: 717  EAE-----QWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRS 769
            E          DC +   RA  +AP    L F+      + +    +L +T++T  +V++
Sbjct: 1282 EKSLAAMNTALDCTQ---RARAIAPEQIHLEFNVAFVQNQIALLVISLPETQKTLQDVQA 1338

Query: 770  TVAELENAVRVFSHLSAASNL-HLHGFDEKKIN----THVEYCKHLLDAAKIHREAAERE 824
                L+ A+  F+ +S A    +  G  E++ N    T     +  L + K + E    +
Sbjct: 1339 ASKGLDEAINTFTQISKAKKPPYPRGALEQRANMGRNTMRRKLERTLQSQKEYEEKNATK 1398

Query: 825  EQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRS 884
             QQ R+ +EA  +    E+ + +  E+K+    KR++ ++++RL ++ +    +      
Sbjct: 1399 LQQAREAREAELKRREEEKRKAEEVERKR----KRQIAEDRQRLIEEAQRLAAI-----R 1449

Query: 885  STPASKRRERSENDDDEVGHSEKRRRKGG--KRRKK 918
            +     R E     D E G   KR+++    KR+KK
Sbjct: 1450 AEEEKAREEAEYTTDSETGDKVKRKKRAAVSKRKKK 1485


>gi|365763122|gb|EHN04652.1| Ctr9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1077

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 202/892 (22%), Positives = 367/892 (41%), Gaps = 177/892 (19%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------ 342
               K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y       
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKAFDA 423

Query: 343  ----------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
                      Q    EKA + L +  K+        +     L+ S      + +KT+  
Sbjct: 424  KTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKTSLD 483

Query: 393  LLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
             L KA E       E+P+EVLNN+   HF  G+F  A   FK A            K K 
Sbjct: 484  YLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------KAKV 531

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
               D S +                          +T+ +N+AR  E+ +D   +  +Y  
Sbjct: 532  SGKDESVN--------------------------ITLEYNIARTNEK-NDCEKSESIYSQ 564

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLE---- 558
            +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N           DLE    
Sbjct: 565  VTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK---------SDLEIRSF 614

Query: 559  ----LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----LRNEKRAP 605
                LKN    K  E     +  T    +  D+YA +SL N     A      RN K   
Sbjct: 615  YAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQE 674

Query: 606  KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 665
            K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +V+++      
Sbjct: 675  KSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE-- 731

Query: 666  VQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------E 717
                DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y        
Sbjct: 732  ----DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERS 787

Query: 718  AEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVR 768
               +Q   ++   A+ L     + S +       +A+  F  A TL+++    RT  +++
Sbjct: 788  VNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIK 847

Query: 769  STVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE--- 825
             ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   
Sbjct: 848  DSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEK 904

Query: 826  QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEEHF- 875
            +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E   
Sbjct: 905  EQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQEREAMA 964

Query: 876  ------------QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
                             ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 965  ISEHNVKDDSDLSDKDNEYDEEKPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|119182399|ref|XP_001242334.1| hypothetical protein CIMG_06230 [Coccidioides immitis RS]
 gi|392865229|gb|EAS31007.2| hypothetical protein CIMG_06230 [Coccidioides immitis RS]
          Length = 1210

 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 204/851 (23%), Positives = 339/851 (39%), Gaps = 170/851 (19%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ R K+ +   AT   N+A+R++   P  ++ +G L L +               
Sbjct: 135 GQLLSEARTKDYYLQAATATLNEATRMNPAFPPLFLARGVLSLLRASLQPPAKPIRPGTV 194

Query: 99  -----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+
Sbjct: 195 DTSERVESLRQALKCFDESSKAFGNRNVMAILGRARAQYMLGRYAEALEGYQDVLMKMPN 254

Query: 150 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANE 201
                 R+GIG C ++L    +A+ A+ RAL L+P +  A + LA   L         + 
Sbjct: 255 MTDPDPRIGIGCCLWQLDFKDQAKAAWNRALALNPNSKVANILLAAYYLYDSSRHATTDP 314

Query: 202 AAG--IRKGMEK-MQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVT 253
           A G   +  M +  Q+AF++   YP  CAM   Y     F   +HF  VE L   A+ +T
Sbjct: 315 AFGSLYKLAMTQYTQKAFKLDKEYPLTCAMFGGY-----FLLRRHFPTVEALARKAIELT 369

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGD 312
           +     S  +Y LAR  H +GD  KA  YY  S +      +   P  +G  Q+Q+K  D
Sbjct: 370 DVNAIASDGWYLLARKEHEEGDPSKAQEYYNRSDQARGGSDKGYLPAKFGAVQMQIKAHD 429

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--- 355
              A    EK+ +    N E +  LG +Y +                +I+KA  LL    
Sbjct: 430 KDGAKFRLEKIFQ-QKKNPEAMTLLGSLYAEEIFEALASGNKEDKSTEIKKAIGLLEAVR 488

Query: 356 -----KAAKIDPRDAQAFIDLGELLISSDTGAAL--------------------DAFKTA 390
                +  KI P D    + L  L  +S    ++                    D  +  
Sbjct: 489 ASWKDEKKKISP-DISVLLYLARLYETSAPEKSMQCLSQIEQIQLAQIPQEDRPDNVEDE 547

Query: 391 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 450
            T+     E +  ++LNN+G   ++  + E A   F+ AL   +     D  T T   DA
Sbjct: 548 ETMTNILRERLAPQLLNNMGCFFYQADKIEQARNMFQTALNACVKTQEKDDGTDT---DA 604

Query: 451 SASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 510
             +                           T+ +NL R  E       A  +Y+ +L ++
Sbjct: 605 LVT---------------------------TISYNLGRTYETAGMPEEAEKVYKGLLERH 637

Query: 511 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------W 564
            DY +A  RL  +A       L     +E        P  ++ L + E  N +      W
Sbjct: 638 SDYTEANARLTYMA-------LRQSPTDEG-------PKKMAKLYEAEATNLEVRALFGW 683

Query: 565 VKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLE 608
              K   R A+ A D +              D Y+  ++GN +   A  +R +    + +
Sbjct: 684 YLNKSKRRTANIAEDHEQRHHKHTLQGYDKHDRYSLTAMGNIHLMVARDMRRDGEQDREK 743

Query: 609 ATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 667
              + E+A E + + +     N YAA G  + L      D  KD  + VQ  +     ++
Sbjct: 744 RRKVYERAVEFFDKALQLDPKNAYAAQGIAIAL-----VDDRKDYASAVQVFSKVRDSIR 798

Query: 668 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKS 727
              V++NL HV+     F+ +++ Y+  L K     D QIL  L R  +   + +    S
Sbjct: 799 DASVYLNLGHVFAELRQFSKSIENYEIALSKDRAK-DPQILSCLGRVWFLKGKQERSITS 857

Query: 728 LL-------RAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAV 778
           +        RA  +AP    L F+      + +  AS L +T++T+ E+   ++ L+ AV
Sbjct: 858 MRTALEYAERARAVAPEQKHLDFNIAFVQNEIAHLASNLPETQKTSQEIEEALSGLDEAV 917

Query: 779 RVFSHLSAASN 789
             F  ++ A N
Sbjct: 918 VTFEKIAKAPN 928


>gi|50545131|ref|XP_500103.1| YALI0A15686p [Yarrowia lipolytica]
 gi|49645968|emb|CAG84034.1| YALI0A15686p [Yarrowia lipolytica CLIB122]
          Length = 981

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 199/812 (24%), Positives = 341/812 (41%), Gaps = 128/812 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           AT+Y NKA  ID       + +    +  G  + A + F  VL+    N+ AL+G+A V 
Sbjct: 112 ATEYANKAFSIDKTWRVNVLTEAVFKIQTGGWDGALTNFNTVLQTQNTNLLALMGKARVL 171

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN-- 185
           + +  Y ++L+ Y+  L   PS     R+GIGLC + LG   +A  AF+RA +L  +   
Sbjct: 172 YEKKNYREALKLYQSVLSQRPSMKPDPRIGIGLCFWSLGSKEEALAAFERANELAKDKNA 231

Query: 186 -VEALVALAVMD--LQANEAAGIRK----GMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            V+ ++A  + D  LQ        K    GM  ++ +FE+ P  A  L  L   FF    
Sbjct: 232 FVKVMLATCLFDKALQNVATDDFEKYYALGMLHVKDSFELDPKHAPTLVQLQKFFFTKRN 291

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
              + +L +TA+  + +       ++ + R++   G  ++A L      ++ ++ +    
Sbjct: 292 TDAIVKLGDTAINQSENPKVLGQIHFWMGRAHQLAGHVQQA-LESFRQAEKFDRDN---- 346

Query: 299 PYYGLGQ-VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK- 356
             Y LG+ + L   + + A    + +L   P   E    LG IY +  +  KA  LL+  
Sbjct: 347 VGYKLGRALVLWRSNVQEATLLLDGILNSNPKCLEAKVMLGLIYAE-QESPKALPLLQHW 405

Query: 357 -AAKID-PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
            A+K D   D + F+ L +L   S+  AA++        LK+   E     LNNI +  +
Sbjct: 406 VASKGDGAVDEEIFLLLSKL--ESNPKAAVEH-------LKRVSSEDDPATLNNIAIYQY 456

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 474
              ++++A  SF+ A                 V D   S                     
Sbjct: 457 SAHDYDAAQASFEKA---------------KEVADEDQS--------------------- 480

Query: 475 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
                VT+ +N+ R LE    T  A  +Y  +      Y DA +RLA +    +N     
Sbjct: 481 -----VTITYNIGRTLEAKGKTEEARKIYESM-----QYPDADIRLAFLDIVESN----- 525

Query: 535 ELVNEALKVNGKYPNAL--SMLGDLELKN-DDWV-----KAKET--FRAASDATDGKDSY 584
                    +G   +AL   M+ +LE++    W      KA+ET   +  +D  D  D Y
Sbjct: 526 ---------DGGRLDALMERMVTNLEVRALQGWYLRRTRKAEETHLIKTLTD-FDKHDVY 575

Query: 585 ATLSLGNWNYFAALRNEKRAPKLEA------THLEKAKELYTRVIVQHTSNLYAANGAGV 638
           A +S GNW Y    R+ K  PK  +       +  KA E +++ +       YAA G  V
Sbjct: 576 ALVSFGNW-YLTKARSIK--PKNNSDVEKKNKNYFKAAEFFSKALALDPKCAYAAQGVAV 632

Query: 639 VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 698
           + AE  + D++ ++F +V+E  +  +      V++NL H +F    +  A++ Y+  L +
Sbjct: 633 IFAETNRADLAINIFKRVRETITDDI-----SVFVNLGHCFFDLKQYDKAIQSYEVALDR 687

Query: 699 FYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAG----VAMQKFS- 753
           F   +D  +L  L R  Y         K L  A+ L      L+ D      VA  +F  
Sbjct: 688 FKGGSDVTLLSLLGRAWYARGISAKQLKYLDTALELCRKAVELQADPSTTFNVAFIQFQV 747

Query: 754 ASTLQKT---RRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHL 810
           A  L+KT   +R   E+ + +  +  A+     L+++       F ++++         +
Sbjct: 748 AEVLRKTEASKRQLSEIEAAIKGMTEAIASLKELASSDT---PPFPKEELEQRASMGNTV 804

Query: 811 LDAAKIHREAAEREE--QQNRQRQEAARQAAL 840
           +   ++ R  AE++E  + N  + E ARQ  L
Sbjct: 805 VK--QLERALAEQKEYDEANNAKLEEARQYVL 834


>gi|83764950|dbj|BAE55094.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391863430|gb|EIT72741.1| TPR-containing nuclear phosphoprotein that regulates K(+) uptake
           [Aspergillus oryzae 3.042]
          Length = 1200

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 204/847 (24%), Positives = 350/847 (41%), Gaps = 94/847 (11%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++  + + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 134 GELYAEAKTKDHYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVD 193

Query: 99  ----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
               VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   P  
Sbjct: 194 TSERVESLRQALKCFEESSKAFGGRNVMAILGRARTQYMLGRYAEALEGYQKVLMKMPGL 253

Query: 151 PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                R+GIG C + LG   +A+ A++RAL L+P++  A + LAV  L         + A
Sbjct: 254 TDPDPRIGIGCCLWHLGFKDQAKAAWERALALNPDSKVANILLAVYYLYDSSRHATTDPA 313

Query: 203 AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
            G   +  M +  Q+AF++     M       +F     +  VE L   A+  T+     
Sbjct: 314 FGSLYKVAMTQYTQKAFKLDKEYPMTGALFGGYFLLRKSYSTVETLARRAIEHTDVMQIA 373

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
           S  ++ L R  H +GD  +A  +Y  S +      +   P  +G  Q+Q+   D+  A  
Sbjct: 374 SDGWFLLGRKAHYEGDLTRAAEFYNRSDQARGGGDKGYLPARFGTVQMQVSNKDYDGAKF 433

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQ-------LGQIEKAQELLRKAAKIDPRDAQAFIDL 371
             EK+++    N E +  LG +Y +       +G  E      +KA  +       + D 
Sbjct: 434 RLEKIIQ-QTKNPECMILLGALYAEEVFTSERIGSKEDKSAEAKKAISLLESVRALWKDE 492

Query: 372 GELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           G+ L   ++     A    RT  +K+ + +  +E L    ++  E  E     +  K AL
Sbjct: 493 GKKLSPEESVLVYLARLYERTAPEKSMQCLSQLEELQLAAIVEDEHREGLENEEQLKAAL 552

Query: 431 GDGIWLTLLDSKTKTYV-----IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
              +   LL S    ++     +D + +M +          E +  H +      T+ +N
Sbjct: 553 RVNLPPQLL-SNMGCFLYQAEKVDQARTMFEMALNACVRSQEKESEH-DTDALVTTISYN 610

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
           L R  E       A  +Y  +L ++ DY +A  RL  IA       L     +E  K   
Sbjct: 611 LGRTYEASDMPEEAKKVYEGLLERHGDYTEASARLTYIA-------LRQSPTDEGPKRMA 663

Query: 546 KYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK--------------DSYATLSLG 590
           K   A S   +LE++    W  +K   R A+ A D +              D Y+   +G
Sbjct: 664 KLYEADST--NLEVRALFGWYLSKSKKRVANLAEDQEQRHYKHTLQYFDKHDRYSLTGMG 721

Query: 591 NWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQF 646
           N +   A  +R E    K +   + E+A E + + +     N YAA G  + L + K  +
Sbjct: 722 NVHLMTARDMRRENDQEKEKRRKMYERAVEFFDKALQLDPQNAYAAQGIAIALVDAKKDY 781

Query: 647 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 706
             +  +F+++++    S       V++NL HVY     +  +++ Y+  L K     DAQ
Sbjct: 782 STAVHIFSKIRDTLRDS------SVYLNLGHVYAELRQYTRSIEHYEAALSKDRAR-DAQ 834

Query: 707 ILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFSA--STL 757
           IL  L R      + E      K+ L    RA  +APS   L F+      + ++   +L
Sbjct: 835 ILACLGRVWLLKGKQEMSLSAMKTALDYARRAHSVAPSQVHLEFNVAFVQNQIASLVYSL 894

Query: 758 QKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEKKINTHVEYCKHLLDAAKI 816
            +T++T  +V+     L  AV  F  ++   N  +  G  E++ N      K L  A + 
Sbjct: 895 PETQKTVQDVQDASDGLREAVESFGRIAQTKNPPYPAGALEQRANMGKTIIKQLERALQS 954

Query: 817 HREAAER 823
            RE  E+
Sbjct: 955 QREYEEK 961


>gi|452981934|gb|EME81693.1| hypothetical protein MYCFIDRAFT_50383 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 1210

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 232/965 (24%), Positives = 383/965 (39%), Gaps = 198/965 (20%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK--- 61
           Y KQ K +    I++ G    I    +D +   +A L      + YL K     R K   
Sbjct: 78  YIKQNKADLAVDIVKRGLE-AIPSARSDDKLSLLACL-----VWIYLWKCRKAPRVKPTQ 131

Query: 62  -------EEHFILATQY-YNKASRIDMHEPSTWVGKGQLLLAKGEVE------------- 100
                  +EH++ A     N ASRI    P  ++ +G LLL K  ++             
Sbjct: 132 ATEDERTKEHWLGAANIALNDASRISPSYPPLFLARGTLLLLKASLQPTKFGPGGQEHSE 191

Query: 101 ------QASSAFKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQ--VHPSCP 151
                 QAS  F        + NV A++G+A  +F+  +Y ++   Y++AL+     + P
Sbjct: 192 RIETLRQASKNFDDAYRVSGNKNVLAIMGKARTQFSLAKYPEAYILYQQALERATDLTDP 251

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL----QANE-----A 202
              R+GIG C ++LG    A++A++RAL+L+  +  A + L +  L    Q N      A
Sbjct: 252 DP-RIGIGCCLWQLGHKENAKEAWERALELNETSTIANILLGLYYLDQSGQYNTTDKAFA 310

Query: 203 AGIRKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
              RK M E  Q AF++    A+  +    +F        VE+L   A+  T+     S 
Sbjct: 311 PIYRKAMTEYTQTAFKLNDMHALTCSTFGGYFLLRKTWPNVERLARRAIEHTDVNAIASD 370

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK--LGDFRSALTN 319
            +Y LAR  H +GD  KA  +Y  + +          P    G VQLK  + D   A   
Sbjct: 371 GWYLLARKDHYEGDLAKAQDHYTKADQARGGDDRGYLPA-KFGAVQLKTLMQDIDGAKFR 429

Query: 320 FEKVLEIYPDNCETLKALGHIY------------------------VQLGQIEKAQELLR 355
            EK+L +   N E    LG +Y                        V+L Q+  A +  +
Sbjct: 430 LEKML-LTNKNVEATTLLGVLYAEEVFAAQAAGSKEDKSESKKKAIVRLEQVRVAWKDSK 488

Query: 356 KAAKIDPRDAQAFIDLG---------------------ELLISSDTGAALDAFKTARTLL 394
           K  KI P D+   ++L                      EL   SD     D  +T  + +
Sbjct: 489 K--KITP-DSAVLLNLARLYEQDAPDKALSCLLHVEQLELAEISDEDLPEDIDETDESAV 545

Query: 395 KKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
           + A +E +  ++LNNIG  +F       A + F+ AL   + +   D    T   DA  +
Sbjct: 546 RAAKQEMLSPQLLNNIGSFYFHADRLSQAREYFQYALRSSVSINAKDESVDT---DALVT 602

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                                      T+ +NLAR  E       A  +Y+ +L ++ DY
Sbjct: 603 ---------------------------TISYNLARTYEAEGVEDEAENIYKKLLERHPDY 635

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG---------DLELKNDDW 564
           +DA  R+A +A  RN+     E + E ++ +       ++ G          L L  D  
Sbjct: 636 IDANSRMAYLA-LRNDPAKGAEAIKELMEADPANLEVRALYGWYINKHKKRTLALNED-- 692

Query: 565 VKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE-------KAKE 617
            + ++ ++      D  D Y+   +GN +   A    +  P+    H E       +A E
Sbjct: 693 -QEQKHYKHTLMTYDKHDIYSLTGMGNLHLTVA----REMPRDTDVHKERRSKTYARAVE 747

Query: 618 LYTRVIVQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 676
            + +V+     N +AA G G+ +  EK        +F++V+E+      V+   V INL 
Sbjct: 748 FFDKVLTLDPKNAFAAQGLGIAMVEEKKDTSAGISVFSKVRES------VKDASVHINLG 801

Query: 677 HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL---- 729
           HVY     F+ +++ Y+  L K   + D QI+  L R       AE+  D  K+ L    
Sbjct: 802 HVYCELKQFSRSIENYELALAK-SRDKDPQIMACLGRAWLMRGRAEKSLDALKTSLYISQ 860

Query: 730 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
           +A+  AP N   +F+      + +   + +      E   T+A++E A +    L AA  
Sbjct: 861 QALEKAPDNINFKFNVAFVQIQIAQQMIMQP-----EANKTLADVEIASK---GLDAA-- 910

Query: 790 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAE 849
             +  F E   + +  + +H            + E++ N  R    RQ A A E  ++AE
Sbjct: 911 --IESFGEIAKSPNTPFPRH------------DIEQRANMGRNTMKRQLATAIE--KQAE 954

Query: 850 EQKKY 854
            +KK+
Sbjct: 955 YEKKH 959


>gi|886951|emb|CAA88282.1| orf7 [Saccharomyces cerevisiae]
          Length = 1045

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 199/884 (22%), Positives = 362/884 (40%), Gaps = 161/884 (18%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKENYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------ 342
               K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y       
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKAFDA 423

Query: 343  ----------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
                      Q    EKA + L +  K+        +     L+ S      + +KT+  
Sbjct: 424  KTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKTSLD 483

Query: 393  LLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
             L KA E       E+P+EVLNN+   HF  G+F  A   FK A              K 
Sbjct: 484  YLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------------KA 529

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
             V D   S+                         +T+ +N+AR  E+ +D   +  +Y  
Sbjct: 530  KVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESIYSQ 564

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLELKND 562
            +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   LKN 
Sbjct: 565  VTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYLKNS 622

Query: 563  DWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEKRAPKLEATHLE 613
               K  E     +  T    +  D+YA +SL N     A      RN K   K + ++L 
Sbjct: 623  KERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQGKSKHSYL- 681

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
            KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          DV +
Sbjct: 682  KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------DVQL 735

Query: 674  NLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQDCK 725
            NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q   
Sbjct: 736  NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKETSVNFYQKAL 795

Query: 726  KSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAELEN 776
            ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  L+ 
Sbjct: 796  ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEGLKE 855

Query: 777  AVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQR----- 831
             + +F  L+     ++    ++++   ++  +  + +A + R   E+EE +  QR     
Sbjct: 856  GLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFKKEQRAKIDE 912

Query: 832  -QEAARQAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEEHF--------- 875
             ++   +  L E+   K EE+ + L LEK     RKL+DE +++ Q  E           
Sbjct: 913  ARKILEENELKEQGWMKQEEEARRLKLEKQAEEYRKLQDEAQKIFQVREAMAISEHNVKD 972

Query: 876  ----QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
                     ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 973  DSDLSDKDNEYDEEQPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|1420046|emb|CAA99166.1| CTR9 [Saccharomyces cerevisiae]
          Length = 1077

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 199/884 (22%), Positives = 362/884 (40%), Gaps = 161/884 (18%)

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+N  
Sbjct: 194  YQKENYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPKNTS 253

Query: 188  ALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            A + + + + +       N+        K +  +   F    +  + L  L  +++F G 
Sbjct: 254  ASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYFKGD 313

Query: 239  HFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            +       +T L + +H   K          S S +   R++++ GDY K+ + +  S+K
Sbjct: 314  Y-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQESLK 366

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------ 342
               K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y       
Sbjct: 367  ---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKAFDA 423

Query: 343  ----------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
                      Q    EKA + L +  K+        +     L+ S      + +KT+  
Sbjct: 424  KTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKTSLD 483

Query: 393  LLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
             L KA E       E+P+EVLNN+   HF  G+F  A   FK A              K 
Sbjct: 484  YLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA--------------KA 529

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
             V D   S+                         +T+ +N+AR  E+ +D   +  +Y  
Sbjct: 530  KVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESIYSQ 564

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLELKND 562
            +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   LKN 
Sbjct: 565  VTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYLKNS 622

Query: 563  DWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----LRNEKRAPKLEATHLE 613
               K  E     +  T    +  D+YA +SL N     A      RN K   K + ++L 
Sbjct: 623  KERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQGKSKHSYL- 681

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 673
            KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          DV +
Sbjct: 682  KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------DVQL 735

Query: 674  NLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQDCK 725
            NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q   
Sbjct: 736  NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKETSVNFYQKAL 795

Query: 726  KSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAELEN 776
            ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  L+ 
Sbjct: 796  ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEGLKE 855

Query: 777  AVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQR----- 831
             + +F  L+     ++    ++++   ++  +  + +A + R   E+EE +  QR     
Sbjct: 856  GLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFKKEQRAKIDE 912

Query: 832  -QEAARQAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEEHF--------- 875
             ++   +  L E+   K EE+ + L LEK     RKL+DE +++ Q  E           
Sbjct: 913  ARKILEENELKEQGWMKQEEEARRLKLEKQAEEYRKLQDEAQKIFQVREAMAISEHNVKD 972

Query: 876  ----QRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKR 915
                     ++    P  KR+  ++  +      E +RRK  K+
Sbjct: 973  DSDLSDKDNEYDEEQPRQKRKRSTKTKNS----GESKRRKAAKK 1012


>gi|156841393|ref|XP_001644070.1| hypothetical protein Kpol_1014p32 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114704|gb|EDO16212.1| hypothetical protein Kpol_1014p32 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1084

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 179/739 (24%), Positives = 310/739 (41%), Gaps = 131/739 (17%)

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
           + N   +L +A + + +  Y  SL  ++  L ++P      R+GIGLC ++L     A +
Sbjct: 180 KPNCFFILIRAKLLYQKNNYLASLRLFQELLVLNPVLQPDPRIGIGLCFWQLKDYKMAIK 239

Query: 174 AFQRALQLDPEN--VEALVALAVMDLQANEAAG-------IRKGMEKMQRAFEIYPYCAM 224
           +++RAL+L+P++   E LV L        E++          + ++ +   +       +
Sbjct: 240 SWKRALELNPKDKSAEILVLLGDFHKSLTESSNDNQFSDYYTEALKNLNNLYSNNKENPV 299

Query: 225 ALNYLANHFFFTGQHFLVEQLTE---TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
            L  L ++F+F G +  V  + E   + +A        S S +  AR+++S  DY KA  
Sbjct: 300 LLTLLQSYFYFKGDYKAVLDIHENKISKVASITTNSVLSDSAFWCARAHYSLHDYRKAFT 359

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
            +  S++   K  + +   +GLGQ Q K      ++  FE + + +    E    LG +Y
Sbjct: 360 MFQESLR---KNEDNLLAKFGLGQTQFKTNLLEESILTFENLYKSFEGIQELNYILGLLY 416

Query: 342 ----VQLGQ----------IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 387
               + L            I K+ + L K  K+        +     LI S+     + +
Sbjct: 417 SGKVLNLSNILPHSESQKLIAKSIQYLEKYVKLTTTKKNQLVIPKAYLILSELYEIQNNY 476

Query: 388 KTARTLLKKAGE--------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 439
           K +   L KA E        E+P E+LNNIG  +F  G+   A + F+ A          
Sbjct: 477 KQSLEYLTKAMEDAKAINKDEIPFEILNNIGCFYFITGDSNKAIEYFEFA---------- 526

Query: 440 DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 499
             + K Y ID   S                         +VT+ +N+AR  E   D   A
Sbjct: 527 KERLKVYDIDTKPS-------------------------EVTLSYNIARTTETT-DISKA 560

Query: 500 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS-MLGDLE 558
           + +Y  IL ++ DY+   +R + IAK        I    + + + G+  N +     DLE
Sbjct: 561 NSMYEDILGRHPDYIHLKVR-SLIAK------FMINGGKDGVSIEGEVENLMKDNSSDLE 613

Query: 559 --------LKND----------DWVKAKETFRAASDAT----DGKDSYATLSLGN-WNYF 595
                   LKND           +VK +E     +  T    +  D +A  S+GN +NY 
Sbjct: 614 VRSFYSWFLKNDMKDTANFDEKKYVKNQEIETNNNKETLVKFNSHDVFALNSMGNFYNYL 673

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
           A  +  KR P+    +  K+ +L+ + +     N++AA G  ++ AE  +   S ++  +
Sbjct: 674 A--KENKRNPEKAKQYYLKSIQLFQKALQVDPLNVFAAQGLAIIFAECKRLGPSLEILRK 731

Query: 656 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD-AQILLYLART 714
           ++++      +   DV +NLA+       +A A++ Y+  L++F  + + A+I   L RT
Sbjct: 732 IRDS------LDTEDVHLNLANCLLEMHEYAKAIEEYEFILKRFLDSKNSAKIYNLLGRT 785

Query: 715 HY---EAEQWQDC-KKSLLRA-----IHLAPSNYTLR------FDAGVAMQKFSASTLQK 759
            Y     E+  DC KKSL  A     +     N T R      F   VA+  F    + +
Sbjct: 786 WYARGNKEKSHDCYKKSLKNAETALKMETEKENGTARGSKIMSFKYNVALLHFQ---IAE 842

Query: 760 TRRTADEVRSTVAELENAV 778
           T R AD    TV ++ NA+
Sbjct: 843 TLRRADVRDRTVEDVTNAL 861


>gi|317138720|ref|XP_001817096.2| hypothetical protein AOR_1_1140184 [Aspergillus oryzae RIB40]
          Length = 1950

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 216/900 (24%), Positives = 375/900 (41%), Gaps = 104/900 (11%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++  + + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 134  GELYAEAKTKDHYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVD 193

Query: 99   ----VEQASSAFKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   P  
Sbjct: 194  TSERVESLRQALKCFEESSKAFGGRNVMAILGRARTQYMLGRYAEALEGYQKVLMKMPGL 253

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C + LG   +A+ A++RAL L+P++  A + LAV  L         + A
Sbjct: 254  TDPDPRIGIGCCLWHLGFKDQAKAAWERALALNPDSKVANILLAVYYLYDSSRHATTDPA 313

Query: 203  AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G   +  M +  Q+AF++     M       +F     +  VE L   A+  T+     
Sbjct: 314  FGSLYKVAMTQYTQKAFKLDKEYPMTGALFGGYFLLRKSYSTVETLARRAIEHTDVMQIA 373

Query: 260  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
            S  ++ L R  H +GD  +A  +Y  S +      +   P  +G  Q+Q+   D+  A  
Sbjct: 374  SDGWFLLGRKAHYEGDLTRAAEFYNRSDQARGGGDKGYLPARFGTVQMQVSNKDYDGAKF 433

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQ-------LGQIEKAQELLRKAAKIDPRDAQAFIDL 371
              EK+++    N E +  LG +Y +       +G  E      +KA  +       + D 
Sbjct: 434  RLEKIIQ-QTKNPECMILLGALYAEEVFTSERIGSKEDKSAEAKKAISLLESVRALWKDE 492

Query: 372  GELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            G+ L   ++     A    RT  +K+ + +  +E L    ++  E  E     +  K AL
Sbjct: 493  GKKLSPEESVLVYLARLYERTAPEKSMQCLSQLEELQLAAIVEDEHREGLENEEQLKAAL 552

Query: 431  GDGIWLTLLDSKTKTYV-----IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
               +   LL S    ++     +D + +M +          E +  H +      T+ +N
Sbjct: 553  RVNLPPQLL-SNMGCFLYQAEKVDQARTMFEMALNACVRSQEKESEH-DTDALVTTISYN 610

Query: 486  LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
            L R  E       A  +Y  +L ++ DY +A  RL  IA       L     +E  K   
Sbjct: 611  LGRTYEASDMPEEAKKVYEGLLERHGDYTEASARLTYIA-------LRQSPTDEGPKRMA 663

Query: 546  KYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK--------------DSYATLSLG 590
            K   A S   +LE++    W  +K   R A+ A D +              D Y+   +G
Sbjct: 664  KLYEADST--NLEVRALFGWYLSKSKKRVANLAEDQEQRHYKHTLQYFDKHDRYSLTGMG 721

Query: 591  NWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQF 646
            N +   A  +R E    K +   + E+A E + + +     N YAA G  + L + K  +
Sbjct: 722  NVHLMTARDMRRENDQEKEKRRKMYERAVEFFDKALQLDPQNAYAAQGIAIALVDAKKDY 781

Query: 647  DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 706
              +  +F+++++    S       V++NL HVY     +  +++ Y+  L K     DAQ
Sbjct: 782  STAVHIFSKIRDTLRDS------SVYLNLGHVYAELRQYTRSIEHYEAALSKDRAR-DAQ 834

Query: 707  ILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFSA--STL 757
            IL  L R      + E      K+ L    RA  +APS   L F+      + ++   +L
Sbjct: 835  ILACLGRVWLLKGKQEMSLSAMKTALDYARRAHSVAPSQVHLEFNVAFVQNQIASLVYSL 894

Query: 758  QKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEKKINTHVEYCKHLLDAAKI 816
             +T++T  +V+     L  AV  F  ++   N  +  G  E++ N      K L  A + 
Sbjct: 895  PETQKTVQDVQDASDGLREAVESFGRIAQTKNPPYPAGALEQRANMGKTIIKQLERALQS 954

Query: 817  HREAAEREEQQNRQRQEAARQAAL--------AEEARRKAEEQKKYLLEKRKLEDEQKRL 868
             RE  E+   + +Q +EA              A+EA R  E +++   E++++ +E +RL
Sbjct: 955  QREYEEKNAAKLQQAREAREAEIRRREEEVRKAQEAER--ERKQRVAEERQRMVEEAQRL 1012


>gi|303319151|ref|XP_003069575.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240109261|gb|EER27430.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320041022|gb|EFW22955.1| tetratricopeptide repeat protein 1 [Coccidioides posadasii str.
           Silveira]
          Length = 1210

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 203/851 (23%), Positives = 338/851 (39%), Gaps = 170/851 (19%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ R K+ +   AT   N+A+R++   P  ++ +G L L +               
Sbjct: 135 GQLLSEARTKDYYLQAATATLNEATRMNPAFPPLFLARGVLSLLRASLQPPAKPIRPGTV 194

Query: 99  -----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+
Sbjct: 195 DTSERVESLRQALKCFDESSKALGNRNVMAILGRARAQYMLGRYAEALEGYQDVLMKMPN 254

Query: 150 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANE 201
                 R+GIG C ++L    +A+ A+ RAL L+P +  A + LA   L         + 
Sbjct: 255 MTDPDPRIGIGCCLWQLDFKDQAKAAWNRALALNPNSKVANILLAAYYLYDSSRHATTDP 314

Query: 202 AAG--IRKGMEK-MQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVT 253
           A G   +  M +  Q+AF++   YP  C M   Y     F   +HF  VE L   A+ +T
Sbjct: 315 AFGSLYKLAMTQYTQKAFKLDKEYPLTCTMFGGY-----FLLRRHFPTVEALARKAIELT 369

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGD 312
           +     S  +Y LAR  H +GD  KA  YY  S +      +   P  +G  Q+Q+K  D
Sbjct: 370 DVNAIASDGWYLLARKEHEEGDPSKAQEYYNRSDQARGGSDKGYLPAKFGAVQMQIKAHD 429

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--- 355
              A    EK+ +    N E +  LG +Y +                +I+KA  LL    
Sbjct: 430 KDGAKFRLEKIFQ-QKKNPEAMTLLGSLYAEEIFEALASGNKEDKSTEIKKAIGLLEAVR 488

Query: 356 -----KAAKIDPRDAQAFIDLGELLISSDTGAAL--------------------DAFKTA 390
                +  KI P D    + L  L  +S    ++                    D  +  
Sbjct: 489 ASWKDEKKKISP-DISVLLYLARLYETSAPEKSMQCLSQIEQIQLAQIPQEDRPDNVEDE 547

Query: 391 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 450
            T+     E +  ++LNN+G   ++  + E A   F+ AL   +     D  T T   DA
Sbjct: 548 ETMTNILRERLAPQLLNNMGCFFYQADKIEQARNMFQTALNACVKTQEKDDGTDT---DA 604

Query: 451 SASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 510
             +                           T+ +NL R  E       A  +Y+ +L ++
Sbjct: 605 LVT---------------------------TISYNLGRTYETAGMPEEAEKVYKGLLERH 637

Query: 511 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------W 564
            DY +A  RL  +A       L     +E        P  ++ L + E  N +      W
Sbjct: 638 SDYTEANARLTYMA-------LRQSPTDEG-------PKKMAKLYEAEATNLEVRALFGW 683

Query: 565 VKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLE 608
              K   R A+ A D +              D Y+  ++GN +   A  +R +    + +
Sbjct: 684 YLNKSKRRTANIAEDHEQRHHKHTLQGYDKHDRYSLTAMGNIHLMVARDMRRDGEQDREK 743

Query: 609 ATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 667
              + E+A E + + +     N YAA G  + L      D  KD  + VQ  +     ++
Sbjct: 744 RRKVYERAVEFFDKALQLDPKNAYAAQGIAIAL-----VDDRKDYASAVQVFSKVRDSIR 798

Query: 668 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKS 727
              V++NL HV+     F+ +++ Y+  L K     D QIL  L R  +   + +    S
Sbjct: 799 DASVYLNLGHVFAELRQFSKSIENYEIALSKDRAK-DPQILSCLGRVWFLKGKQERSITS 857

Query: 728 LL-------RAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAV 778
           +        RA  +AP    L F+      + +  AS L +T++T+ E+   ++ L+ AV
Sbjct: 858 MRTALEYAERARAVAPEQKHLDFNIAFVQNEIAHLASNLPETQKTSQEIEEALSGLDEAV 917

Query: 779 RVFSHLSAASN 789
             F  ++ A N
Sbjct: 918 VTFEKIAKAPN 928


>gi|302655461|ref|XP_003019518.1| hypothetical protein TRV_06455 [Trichophyton verrucosum HKI 0517]
 gi|291183248|gb|EFE38873.1| hypothetical protein TRV_06455 [Trichophyton verrucosum HKI 0517]
          Length = 1201

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 195/826 (23%), Positives = 343/826 (41%), Gaps = 122/826 (14%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ + KE +   AT   N+ASR++   P  ++ +G L + +               
Sbjct: 133 GQLHSEAKTKEFYLQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPLRPGTI 192

Query: 99  -----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                VE    A K   E+ +     N+ A+LG+A   +  GRY+++LE Y+ AL   PS
Sbjct: 193 DTSERVESLQQAIKCFDESAKAFGGRNIMAILGRARANYMLGRYAEALEGYQEALVKMPS 252

Query: 150 C--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE------ 201
              P   R+GIG C ++L    +A+ A+ RAL L+P++  A + LA   L  +       
Sbjct: 253 MRDPDP-RIGIGCCLWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTSD 311

Query: 202 ---AAGIRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              ++  +  M +  Q+AF++     M      ++F        VE L   A+ +T+   
Sbjct: 312 PEFSSLYKTAMTQYTQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNA 371

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSA 316
             S  +Y LAR  H++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A
Sbjct: 372 IASDGWYLLARKEHTEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGA 431

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
               EK+++    N E +  LG +Y        A E+   A   + + A+A   +  LL 
Sbjct: 432 KFRLEKIIQ-QTKNPEAMALLGSLY--------ADEVFAAANSKEDKSAEAKKAIS-LLE 481

Query: 377 SSDTGAALDAFKTART---------LLKKAGEEVPIEVLNNIGVIHF------EKGEFES 421
           S  T    D  K             L + +  +  ++ LN +  +        EK E   
Sbjct: 482 SVRTSWKADKKKLTPDESVLLYLARLYEASAPDKSMQCLNQVEEMQLAQIPDDEKPENVE 541

Query: 422 AHQSFKDALGDGIWLTLLDSKT----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
             Q+  D L + +   LL++      +   I+ + +MLQ          E + +  +   
Sbjct: 542 GEQAMTDVLRERLSPQLLNNIGCFLYQADKIEPARTMLQTALNACVQAQERE-DASDTDA 600

Query: 478 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
              T+ +NLAR  E       A  +Y  +L ++ DYV+A  RL  I+  ++         
Sbjct: 601 YVTTISYNLARTYEAAGMLDEAKKVYEGLLERHSDYVEANARLTYISLRQD--------- 651

Query: 538 NEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDATDGK---------- 581
                 +G+    ++ L + E  N +      W   K   R A+ A D +          
Sbjct: 652 -----PSGEGAKKMTKLYETEASNMEVRALYGWYLNKTKRRVANLAEDHEQRHYKHTLQG 706

Query: 582 ----DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAA 633
               D YA   +GN  Y    R+ +R  + E        EKA E + + +     N YAA
Sbjct: 707 YDKHDRYALTGMGNL-YLLTGRDMRRDGEQEKEKRHKIYEKAVEFFDKALQLDPKNAYAA 765

Query: 634 NGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 692
            G  + L  ++  +  +  +F++V++    S       V++NL HV+     F  +++ Y
Sbjct: 766 QGIAIALVDDRKDYSTAVQIFSKVRDTLRDST------VYLNLGHVFAELRQFTKSIENY 819

Query: 693 QNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDA 745
           +  L K     DAQIL  L R  +   + EQ     K+ L    RA   AP    L F+ 
Sbjct: 820 EISLSKDRAR-DAQILACLGRVWFLKGKQEQNLTAMKTALEYAERARSAAPDQIHLEFNI 878

Query: 746 GVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
                + +  A +L + ++++++V   +  L  A+  F  ++++ N
Sbjct: 879 AFVQNEIALLAISLPEGQKSSEDVEEAMNGLTAAIEAFDKIASSKN 924


>gi|146416301|ref|XP_001484120.1| hypothetical protein PGUG_03501 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1074

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 209/892 (23%), Positives = 374/892 (41%), Gaps = 139/892 (15%)

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGI 158
           +QA   +  + +AD  N  ALLG+A +  N+ + Y   L  Y++ L ++P      R+GI
Sbjct: 155 DQAWEIYDGIWKADPKNCFALLGKAHIALNKTKNYKSGLRLYQQVLLLNPIMKPDPRIGI 214

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQANEA-------AGIRKGM 209
           G+C + L     A  +++RAL++D  N  A  L+ L+  +   N++          ++ +
Sbjct: 215 GICAWMLNDQEMAVNSWKRALEIDSLNTAAKLLITLSQFNDAFNKSLSDESFITSYKECL 274

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS-----YY 264
            K++    +     + L +++ +++   Q+ +VE++    L     G +K HS     Y 
Sbjct: 275 IKLRDLPHLSEDTTILLAFVS-YYYSKEQYDIVEKICNNILQ-KYSGSSKVHSSKLTPYQ 332

Query: 265 N---------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
           +         L R   +KGDY ++   +  +++  +     +    GLG  Q   G    
Sbjct: 333 SKALSTANSWLGRVSFAKGDYTQSQRSFHEAIRLDDNN---LIAKLGLGLSQANRGSNEE 389

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL--------LR---------KAA 358
           A+  FE VL+  P   E   +LG  Y +L    K Q+L        LR          A+
Sbjct: 390 AIITFESVLKTNPKCLEVNYSLGIFYSKLKS-RKKQDLAILILERYLRLSNNLGLNPTAS 448

Query: 359 KID----------PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           K D          P    A + L  L    D   +L     A     + G  VPIEV NN
Sbjct: 449 KKDDDESSLSSKEPIVLNALLTLSRLYEGRDLNQSLTYLSKAIESRTQVGLSVPIEVYNN 508

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
           +GV++F K   + A ++F+ A+ +       +S+ K+  I        F D+ L      
Sbjct: 509 LGVMNFFKNNLDEAKENFEFAVQN----IRKESEEKSDPI--------FDDLSL------ 550

Query: 469 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
                       T+ +NLAR  +++ D  AA  +Y+ +  +  +Y  A LRL  +     
Sbjct: 551 ------------TIDYNLARS-QEVSDEKAAISIYKSVTERSSNYFSASLRLLFLDCVST 597

Query: 529 N---------LQLSIELVNEA-LKVNGKYPNALSMLGD-LELKND-DWVKAKETFRAASD 576
           N             +   N A L++   Y       G  + +K D D    K+T      
Sbjct: 598 NESTKEQIRERIEELLEENPANLEIRSFYGWFAKTFGKRIGMKQDADTEHQKKTLVE--- 654

Query: 577 ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK----AKELYTRVIVQHTSNLYA 632
             D  DSYA LSL N  Y    R+ K +    A   +K    A EL+T+VI   + N+YA
Sbjct: 655 -YDSHDSYALLSLANI-YCIMARDVKGSGSAVAEKRKKYYIRAIELFTKVISVDSKNVYA 712

Query: 633 ANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 692
           A G  +V  E        ++  +++++ +         V++NL HV      F+ +++ Y
Sbjct: 713 AQGLAIVYIENKDSQKGLEILRKIRDSLND------ISVYLNLGHVLLELKQFSKSIENY 766

Query: 693 QNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS--------NYTLRFD 744
           +  L +F   TD++IL +L R  Y     +     L +A+  A            +LRF+
Sbjct: 767 EIALVRFTSGTDSKILSFLGRAWYMRGLAEKDLFYLKKALDYAQEAQKQSGGLQASLRFN 826

Query: 745 AGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKI 800
             +A  +F      + +   +R  D+++  +  L  A+   + L++    H   + + ++
Sbjct: 827 --IAYVQFQIAEFITKIAVEQRNVDDIKRAIEGLNEAIETLNSLASDDEAH-PPYPKLEL 883

Query: 801 NTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL-AEEARRKAEEQKKYLLEKR 859
            +        L A +++    E EE  N+   + A    L  EEA ++ EE++  +L ++
Sbjct: 884 KSRANLGTTTL-ANRLNTCLEETEEYINKVENKLAEAKRLRQEEAAKRLEEEQNRILRQK 942

Query: 860 KLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRK 911
           + E+E   L ++    Q   +QW   +    R    E+ DD++  +E  + K
Sbjct: 943 QAEEE---LAKERAKLQEQAQQWVEES----RAFVEEDKDDQLFEAESAKDK 987


>gi|315048619|ref|XP_003173684.1| hypothetical protein MGYG_09033 [Arthroderma gypseum CBS 118893]
 gi|311341651|gb|EFR00854.1| hypothetical protein MGYG_09033 [Arthroderma gypseum CBS 118893]
          Length = 1194

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 196/820 (23%), Positives = 338/820 (41%), Gaps = 117/820 (14%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ + KE +   AT   N+ASR++   P  ++ +G L + +               
Sbjct: 133 GQLHSEAKTKEFYLQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPVRPGTI 192

Query: 99  -----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                VE    A K   E+ +     N+ A+LG+A   +  GRY D+LE Y+ AL   PS
Sbjct: 193 DTSERVESLQQAIKCFDESAKAFGGRNIMAILGRARANYMLGRYGDALEGYQEALVKMPS 252

Query: 150 C--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN------- 200
              P   R+GIG C ++L    +A+ A+ RAL L+P++  A + LA   L  +       
Sbjct: 253 MRDPDP-RIGIGCCLWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTND 311

Query: 201 -EAAGIRKG--MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
            E + + K    +  Q+AF++     M      ++F        VE L   A+ +T+   
Sbjct: 312 PEFSSLYKTAMTQYTQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNA 371

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSA 316
             S  +Y LAR  H++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A
Sbjct: 372 IASDGWYLLARKEHTEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGA 431

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
               EK+++    N E +  LG IY        A E+   ++  + + A+A   +  LL 
Sbjct: 432 KFRLEKIIQ-QTKNPEAMALLGSIY--------ADEVFAASSSKEDKSAEAKKAIS-LLE 481

Query: 377 SSDTGAALDAFKTART---------LLKKAGEEVPIEVLNNIGVIHF------EKGEFES 421
           S  T    D  K             L + +  E  ++ LN +  +        EK +   
Sbjct: 482 SVRTSWKADKKKLTPDESVLLYLARLYETSAPEKSMQCLNQVEEMQLAQIPDDEKPDNVE 541

Query: 422 AHQSFKDALGDGIWLTLLDSKT----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
             Q+  D L + +   LL++      ++  I+ + +MLQ          E + +  +   
Sbjct: 542 GEQAVNDVLRERLSPQLLNNIGCFLYQSDKIEQARTMLQTALNACVQAQERE-DASDTDA 600

Query: 478 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
              T+ +NLAR  E       A  +Y  +L +++DYV+A  RL  IA   N      + +
Sbjct: 601 YVTTISYNLARTYEAAGMLDEAKKVYEGLLERHRDYVEANARLTYIALRLNPGDEGSKRM 660

Query: 538 NEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK--------------DS 583
            +  +         ++ G        W   K   R A+ A D +              D 
Sbjct: 661 TKLYETEASNMEVRALYG--------WYLNKSKRRVANLAEDHEQRHYKHTLQGYDKHDR 712

Query: 584 YATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVV 639
           YA   +GN  Y    R+ +R  + E        EKA E + + +     N YAA G  + 
Sbjct: 713 YALTGMGNL-YLLTGRDMRRDGEQEKEKRHKIYEKAVEFFDKALQLDPKNAYAAQGIAIA 771

Query: 640 LA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 698
           L  ++  +  +  +F++V++    S       V++NL HV+     F    K  +N   +
Sbjct: 772 LVDDRKDYSTAVQIFSKVRDTLRDST------VYLNLGHVFAELRQFT---KSIENDRAR 822

Query: 699 FYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQK 751
                DAQIL  L R  +   + EQ     K+ L    RA   AP    L F+      +
Sbjct: 823 -----DAQILACLGRVWFLKGKQEQNLTAMKTALEYAERARSAAPDQIHLEFNIAFVQNE 877

Query: 752 FS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
            +  A +L + ++T+++V   +  L  A+  F  ++++ N
Sbjct: 878 IALLAISLPEVQKTSEDVEEAMNGLTAAIEAFDKIASSKN 917


>gi|327300897|ref|XP_003235141.1| tetratricopeptide repeat protein [Trichophyton rubrum CBS 118892]
 gi|326462493|gb|EGD87946.1| tetratricopeptide repeat protein [Trichophyton rubrum CBS 118892]
          Length = 1201

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 195/848 (22%), Positives = 339/848 (39%), Gaps = 166/848 (19%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ + KE +   AT   N+ASR++   P  ++ +G L + +               
Sbjct: 133 GQLHSEAKTKEFYLQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPLRPGTV 192

Query: 99  -----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                VE    A K   E+ +     N+ A+LG+A   +  GRY+++LE Y+ AL   PS
Sbjct: 193 DTSERVESLQQAIKCFDESAKAFGGRNIMAILGRARASYMLGRYAEALEGYQEALVKMPS 252

Query: 150 C--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN------- 200
              P   R+GIG C ++L    +A+ A+ RAL L+P++  A + LA   L  +       
Sbjct: 253 MRDPDP-RIGIGCCLWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTSD 311

Query: 201 -EAAGIRKG--MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
            E + + K    +  Q+AF++     M      ++F        VE L   A+ +T+   
Sbjct: 312 PEFSSLYKTAMTQYTQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNA 371

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSA 316
             S  +Y LAR  H++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A
Sbjct: 372 IASDGWYLLARKEHTEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGA 431

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYV------------QLGQIEKAQELL---RKAAKID 361
               EK+++    N E +  LG +Y             +  + +KA  LL   R + K D
Sbjct: 432 KFRLEKIIQ-QTKNPEAMALLGSLYADEVFAAANSKEDKSAEAKKAISLLESVRTSWKAD 490

Query: 362 PR----DAQAFIDLGELLISSDTGAAL--------------------DAFKTARTLLKKA 397
            +    D    + L  L  +S    ++                    D  +  + +    
Sbjct: 491 KKKLTPDESVLLYLARLYETSAPDKSMQCLNQVEEMQLAQIPDDEKPDNVEGEQAMTDIL 550

Query: 398 GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD--SKTKTYVIDASASML 455
            E +  ++LNNIG   ++  + E A    + AL   +     +  S T  YV        
Sbjct: 551 RERLSPQLLNNIGCFLYQADKIEQARTMLQTALNACVQAQEREDASDTDAYV-------- 602

Query: 456 QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD 515
                                    T+ +NLAR  E       A  +Y  +L ++ DYV+
Sbjct: 603 ------------------------TTISYNLARTYEAAGMLDEAKKVYEGLLERHSDYVE 638

Query: 516 AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKE 569
           A  RL  I+  ++               +G+    ++ L + E  N +      W   K 
Sbjct: 639 ANARLTYISLRQDP--------------SGEGAKKMTKLYETEASNMEVRALYGWYLNKT 684

Query: 570 TFRAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH---- 611
             R A+ A D +              D YA   +GN  Y    R+ +R  + E       
Sbjct: 685 KRRVANLAEDHEQRHYKHTLQGYDKHDRYALTGMGNL-YLLTGRDMRRDGEQEKEKRHKI 743

Query: 612 LEKAKELYTRVIVQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPD 670
            EKA E + + +     N YAA G  + L  ++  +  +  +F++V++    S       
Sbjct: 744 YEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDYSTAVQIFSKVRDTLRDST------ 797

Query: 671 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKS 727
           V++NL HV+     F  +++ Y+  L K     DAQIL  L R  +   + EQ     K+
Sbjct: 798 VYLNLGHVFAELRQFTKSIENYEISLSKDRAR-DAQILACLGRVWFLKGKQEQNLTAMKT 856

Query: 728 LL----RAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVF 781
            L    RA   AP    L F+      + +  A +L + ++++++V   +  L  A+  F
Sbjct: 857 ALEYAERARSAAPDQIHLEFNIAFVQNEIALLAISLPEAQKSSEDVEEAMNGLTAAIEAF 916

Query: 782 SHLSAASN 789
             ++++ N
Sbjct: 917 DKIASSKN 924


>gi|169612001|ref|XP_001799418.1| hypothetical protein SNOG_09115 [Phaeosphaeria nodorum SN15]
 gi|160702414|gb|EAT83307.2| hypothetical protein SNOG_09115 [Phaeosphaeria nodorum SN15]
          Length = 1142

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 216/994 (21%), Positives = 406/994 (40%), Gaps = 190/994 (19%)

Query: 36   ERIAILNALGVYYTYLGKIETKQR---------EKEEHFILATQYYNKASRIDMHEPSTW 86
            ER++ILN  G+ + YL K     R          K+ +   AT   N+ASRI    P  +
Sbjct: 108  ERLSILN--GLCWLYLLKCREAPRVKSDDPNIKTKDAYIQEATGVLNEASRISPSHPPLF 165

Query: 87   VGKGQLLLAKGEVE--------------------QASSAFKIVLEADRD-NVPALLGQAC 125
            + +G L L +  ++                    QA+  F   L A    N+ A +G+A 
Sbjct: 166  LARGVLYLLRASLQSPATTAGPNAVSVERAETLKQAAKCFDDALRASGGRNLMAKMGRAR 225

Query: 126  VEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
            V ++ G+++++L+ Y+  L+  P    P   R+GIG C + LG    A  A+QR+L L+P
Sbjct: 226  VSYSLGKWAEALKGYQSVLESSPDLIDPDP-RIGIGSCFWHLGFKDDAAGAWQRSLDLNP 284

Query: 184  ENVEALVALAVMDLQANE---------AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
            ++  AL+ LA  +L  +          A   +K ++ +  A  +     +    +  +F 
Sbjct: 285  KSKIALILLAQYNLHLSSQHPPQHPDFAKFYKKTVDYIMSALRLDKNYPLTCASVGGYFV 344

Query: 235  FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
                    + +   A+ +T+     S  +Y+LAR  H++GD  +A   Y  S +      
Sbjct: 345  MRKDWQKAQTVARRAIDLTDVNAIASDGWYHLARKAHAEGDLAEASTCYGRSDQARGGEE 404

Query: 295  EFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ-------LGQ 346
                P  +G  Q+ +   ++  A    EK+++  P N E    LG ++ +        G 
Sbjct: 405  RGYIPAKFGSAQMNVLQLNYSGAKFRLEKIIQQSP-NIEAQTLLGTLWAEDVFAAQNSGS 463

Query: 347  IEKAQELLRKAAK---------IDPR-----DAQAFIDLGELLISSDTGAALDAFKTART 392
             E     L+KA K          DP+     D    ++L  L  +     +L   +    
Sbjct: 464  TEDKSAELQKAIKHLDDVQKAWRDPKKKATPDQSVLLNLARLYETEKPEKSLKCLEEVEK 523

Query: 393  L-LKKAGEE------------------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 433
            + L+   EE                  +P ++LNN+   HF+   +  A + F+ AL   
Sbjct: 524  MELEAIPEEDYPELEDEHEIKAALRELLPPQLLNNMACFHFQAERYTRARELFEAALN-- 581

Query: 434  IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 493
                 + ++ +   ID  A +                          ++ FNL R  E  
Sbjct: 582  ---ACVKAEARDESIDTDALV-------------------------TSISFNLGRCYEAE 613

Query: 494  HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 553
            ++   A  +Y  +L ++ DY+DA LRLA IA  ++  +L ++ + +  + N       ++
Sbjct: 614  NNLDQAKNVYENLLKRHADYIDARLRLAYIAIIQSPNELGLKAIKDLFRENEDNVEVRAL 673

Query: 554  LG------DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKL 607
             G        +++N    + +  ++      D  D Y+   LGN  + A  R   R+ + 
Sbjct: 674  YGWFLHKTKRKMQNIAADEEQRLYKHTLQKFDKHDQYSLTGLGNL-HLAMAREMPRSSEQ 732

Query: 608  EATHLEKAKE----LYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASG 662
            E    +K+ E     + +V+    +N YAA G  + + E K     +  +F +V+E    
Sbjct: 733  EKMKRQKSYETAVAFFDKVLQLDKTNAYAAQGIAIAMVEDKKDSGTALQIFNKVRET--- 789

Query: 663  SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 722
               ++   V++NL H Y     FA A++   +                  RT  +  Q  
Sbjct: 790  ---IKDYSVYMNLGHTYCEMKQFARAIENVNSY-----------------RTALDYSQ-- 827

Query: 723  DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAS----TLQKTRRTADEVRSTVAELENAV 778
                   +A+ ++PS    +F+  VA   F  +     + +++RT  +V   +A L  A+
Sbjct: 828  -------QALKISPSEPNFQFN--VAFMHFQIAQAIINVPESQRTLQQVDDAMAGLAEAI 878

Query: 779  RVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE---EQQNRQRQEAA 835
                 ++ A    +  F    I +     ++ +   K    A E++   E++N+ + E A
Sbjct: 879  DTLDQIAKA---EVTPFPRTDITSRANMGRNTM--VKQLERAREKQVVYEEENKGKLEQA 933

Query: 836  RQ-----AALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASK 890
            R+         +EA+++AE+  +    +RK+ +EQ+R+  ++      + +        +
Sbjct: 934  RKLREEEIRRRDEAKQQAEQATQD--RRRKIIEEQERIAARDRELMEKRAE-------EE 984

Query: 891  RRERSENDDDEVGHSEKRRR--KGGKRRKKDKSS 922
            RR   E++D E+  +E++ R  K  KR+KKD  S
Sbjct: 985  RRRMEEDEDKELRKAERKARGPKQPKRKKKDADS 1018


>gi|302505487|ref|XP_003014450.1| hypothetical protein ARB_07012 [Arthroderma benhamiae CBS 112371]
 gi|291178271|gb|EFE34061.1| hypothetical protein ARB_07012 [Arthroderma benhamiae CBS 112371]
          Length = 1203

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 196/826 (23%), Positives = 343/826 (41%), Gaps = 122/826 (14%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
           G++ ++ + KE +   AT   N+ASR++   P  ++ +G L + +               
Sbjct: 133 GQLHSEAKTKEFYLQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPLRPGTI 192

Query: 99  -----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                VE    A K   E+ +     N+ A+LG+A   +  GRY+++LE Y+ AL   PS
Sbjct: 193 DTSERVESLQQAIKCFDESAKAFGGRNIMAILGRARANYMLGRYAEALEGYQEALVKMPS 252

Query: 150 C--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN------- 200
              P   R+GIG C ++L    +A+ A+ RAL L+P++  A + LA   L  +       
Sbjct: 253 MRDPDP-RIGIGCCLWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTSD 311

Query: 201 -EAAGIRKG--MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
            E + + K    +  Q+AF++     M      ++F        VE L   A+ +T+   
Sbjct: 312 PEFSSLYKTAMTQYTQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNA 371

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSA 316
             S  +Y LAR  H++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A
Sbjct: 372 IASDGWYLLARKEHTEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGA 431

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
               EK+++    N E +  LG +Y        A E+   A   + + A+A   +  LL 
Sbjct: 432 KFRLEKIIQ-QTKNPEAMALLGSLY--------ADEVFAAANSKEDKSAEAKKAIS-LLE 481

Query: 377 SSDTGAALDAFKTART---------LLKKAGEEVPIEVLNNIGVIHF------EKGEFES 421
           S  T    D  K             L + +  +  ++ LN +  +        EK E   
Sbjct: 482 SVRTSWKADKKKLTPDESVLLYLARLYETSAPDKSMQCLNQVEEMQLAQIPDDEKPENVE 541

Query: 422 AHQSFKDALGDGIWLTLLDSKT----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
             Q+  D L + +   LL++      +   I+ + +MLQ          E + +  +   
Sbjct: 542 GEQAMTDILRERLSPQLLNNIGCFLYQADKIEPARTMLQTALNACVQAQERE-DASDTDA 600

Query: 478 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
              T+ +NLAR  E       A  +Y  +L ++ DYV+A  RL  I+  ++         
Sbjct: 601 YVTTISYNLARTYEAAGMLDEAKKVYEGLLERHSDYVEANARLTYISLRQD--------- 651

Query: 538 NEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDATDGK---------- 581
                 +G+    ++ L + E  N +      W   K   R A+ A D +          
Sbjct: 652 -----PSGEGSKKMTKLYETEASNMEVRALYGWYLNKTKRRVANLAEDHEQRHYKHTLQG 706

Query: 582 ----DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAA 633
               D YA   +GN  Y    R+ +R  + E        EKA E + + +     N YAA
Sbjct: 707 YDKHDRYALTGMGNL-YLLTGRDMRRDGEQEKEKRHKIYEKAVEFFDKALQLDPKNAYAA 765

Query: 634 NGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 692
            G  + L  ++  +  +  +F++V++    S       V++NL HV+     F  +++ Y
Sbjct: 766 QGIAIALVDDRKDYSTAVQIFSKVRDTLRDST------VYLNLGHVFAELRQFTKSIENY 819

Query: 693 QNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDA 745
           +  L K     DAQIL  L R  +   + EQ     K+ L    RA   AP    L F+ 
Sbjct: 820 EISLSKDRAR-DAQILACLGRVWFLKGKQEQNLTAMKTALEYAERARSAAPDQIHLEFNI 878

Query: 746 GVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
                + +  A +L + ++++++V   +  L  A+  F  ++++ N
Sbjct: 879 AFVQNEIALLAISLPEGQKSSEDVEEAMNGLTAAIEAFDKIASSKN 924


>gi|403218134|emb|CCK72626.1| hypothetical protein KNAG_0K02630 [Kazachstania naganishii CBS
           8797]
          Length = 1076

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 214/865 (24%), Positives = 361/865 (41%), Gaps = 156/865 (18%)

Query: 116 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           N   LL +A + + +  Y  SL+ ++  L  +P      R+GIGLC ++L     A  A+
Sbjct: 191 NCLFLLMRAKLLYQKKNYMASLKSFQELLVTNPVLKPDPRIGIGLCFWQLKDYQMAISAW 250

Query: 176 QRALQLDPENVEALVALAVM------------DLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           +RAL+LDPEN  A + L ++            D Q  E+    K + ++   +       
Sbjct: 251 ERALELDPENKTASI-LCLLGKFHNSITDSKNDTQFTES--FTKVLTELNDIYTNNKENP 307

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNH--GPT-KSHSYYNLARSYHSKGDYEKAG 280
           + L  L ++++FTG +  V ++ E  ++       PT  S S +   R+ ++  +Y +A 
Sbjct: 308 VLLILLQSYYYFTGDYSRVIKIYEAKISPNASLITPTLMSDSTFWCGRAQYALNNYREAF 367

Query: 281 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           + +  S+K      + +   +G+GQ Q+K      ++  FE + +   +  E    LG +
Sbjct: 368 VMFQESLK---TNEDNLLARFGVGQSQIKTNLVEESILTFENLYKTNENIQELNYVLGLL 424

Query: 341 YVQ-----------LGQ-----IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL 384
           Y +            G+     I KA + L K   +        I     L+ S+     
Sbjct: 425 YAEKCLNTRSRKKLSGKDSNFLITKALQYLEKYINLTTAKKNQLIIKRAYLVMSELYELQ 484

Query: 385 DAFKTARTLLKKAGEE--------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 436
           + +K +  LL KA EE        VP EV NN+G  HF  G+   A + F          
Sbjct: 485 NQYKKSLELLSKAAEELQLIDDGHVPPEVFNNLGFFHFINGDHAKAMEYF---------- 534

Query: 437 TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 496
                KTK  V        + KD  L                ++T+ FN+ R LE   D 
Sbjct: 535 ----DKTKKLVT-------ELKDKSL----------------ELTIDFNIGRTLE--GDQ 565

Query: 497 VA-ASVLYRLILFKYQDYVDAYLR--LAAIAKARNNLQLSIEL------VNEALKVNGKY 547
           V  A  +Y+ IL ++  YV A +R     I        L+ +L       ++ L+V   Y
Sbjct: 566 VGEAQDIYKGILTEHPAYVAARIRSLFCQILNREKTTTLAHDLKQLLHDFSDDLEVRAFY 625

Query: 548 PNALSMLGDLELKNDDWVK---AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRA 604
                 L + ++K+ D ++   +KET        D  D YA +SL N     A   +K +
Sbjct: 626 S---WYLKNCDIKDSDALETAHSKETLV----KYDSHDLYALISLANLYCVIAKEAKKSS 678

Query: 605 PKLEATHLE----KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
              E    +    KA +LY +V+     N++AA G  +V AE  +   + ++F +V+++ 
Sbjct: 679 SSKEQEKSKHSYLKATQLYQKVLQIDPLNVFAAQGIAIVFAESKRLGPALEIFRKVRDS- 737

Query: 661 SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF--YYNTDAQILLYLARTHYEA 718
                +   DV IN+AH      ++  A + Y+  L+KF       A IL  L +  Y  
Sbjct: 738 -----IHNVDVHINIAHCLLEMNDYVKAAENYEIILKKFDKEIPNRAYILNLLGKVWY-- 790

Query: 719 EQWQDCK-------KSLLRAIHLA--------PSN--YTLRFDAGVAMQKFSA-STLQKT 760
              + CK       +  L  I LA        P N  +  R    + + +F    TL+++
Sbjct: 791 --LRGCKERNVGFLQKSLGNIKLAIEDESCKTPLNGKFLNRLQFNLTLLQFQILETLRRS 848

Query: 761 ---RRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD--EKKINTHVEYCKHLLDAAK 815
               RT  +++S   EL +AV V  HL  A +  +   +  E++I       +  LD   
Sbjct: 849 AAKNRTLADLKSASEELTHAVSVLKHLRDADDFKIVSQEELEQRIQLAETTMRTSLDRCI 908

Query: 816 IHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQK--RLRQQEE 873
             +EA ERE  QN +  EA +   + E+  R          E R  ED +K  +L +Q+E
Sbjct: 909 TEQEAFERE--QNSKLDEARKILEMKEQQER----------ETRAKEDMEKLTKLARQKE 956

Query: 874 HFQRVKEQWRSSTPASKRRERSEND 898
            +QR++++ +      +  E  END
Sbjct: 957 EYQRLQDEAQKLIQERETFEVGEND 981


>gi|367008134|ref|XP_003678567.1| hypothetical protein TDEL_0A00240 [Torulaspora delbrueckii]
 gi|359746224|emb|CCE89356.1| hypothetical protein TDEL_0A00240 [Torulaspora delbrueckii]
          Length = 1059

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 193/860 (22%), Positives = 359/860 (41%), Gaps = 138/860 (16%)

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
           + N   L  +A + + +  Y+ SL  ++  L ++P      R+GIGLC ++L     A  
Sbjct: 180 KQNAFFLFLRAKLLYQKKNYAASLRSFQELLVINPVIQPDPRIGIGLCFWQLKDYKIAIA 239

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAAG---------IRKGMEKMQRAFEIYPYCAM 224
           +++RA +L+P N  A + + + D   +               K ++ +   F       +
Sbjct: 240 SWKRAHELNPNNQSAAILVLLGDFHESLVTSENDTVFQETYSKVLQNLNGLFSEDRENPV 299

Query: 225 ALNYLANHFFFTGQHFLVEQLTET---ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
            L  L  +F+  G +  V  + E+    ++ T      S S +   R+Y++  DY KA  
Sbjct: 300 LLTLLEVYFYLKGDYNKVIDIYESKIKGISTTVTSTVLSESLFWCGRAYYALEDYRKAFT 359

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
            +  S+K+     + +   +G+GQ Q+K      ++  FE + +   +  E    LG +Y
Sbjct: 360 MFQQSLKQ---NEDNMLAKFGVGQTQVKNKLVEESILTFENLYKNLENIQELNYILGLLY 416

Query: 342 VQ----------------LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 385
                             L   EKA + L K  K+        +     L  S+     +
Sbjct: 417 AAKCFDKQSTKVLSRNEALALNEKAVQFLEKYVKLTSSKKNQVVVPRAYLTLSELYEDQN 476

Query: 386 AFKTARTLLKKAGEE--------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 437
            +K +   L KA E+        +P+E+LNN+G  HF  G+   AH+ F+DA        
Sbjct: 477 NYKQSLEYLSKAYEQFKALGSKNIPLELLNNLGCFHFINGDLTKAHEFFEDA-------- 528

Query: 438 LLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 497
                 K  V  +S                            +T+ +N+AR LE + D  
Sbjct: 529 ------KARVEQSSG---------------------------LTIEYNVARTLESV-DKS 554

Query: 498 AASVLYRLILFKYQDYVDAYLRL---------AAIAKARNNLQLSIELVNEALKVNGKYP 548
            +  +Y  IL  +  Y+DA +R          A I+   N +    +  +  L+V   Y 
Sbjct: 555 ESENIYSGILSSHPGYIDARMRSLLLRFVQDEADISAIENAVTKFYKENDSNLEVRSFYS 614

Query: 549 NALSMLGDLELKNDDWVKA--KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 606
             L   G  E +ND    A  KET        D  D YA +SLGN  Y    R E+++ K
Sbjct: 615 WFLKK-GKKEKRNDSLETAHNKETL----TKYDSHDLYALISLGNL-YSVIGRGERKSSK 668

Query: 607 LEATH-----LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAAS 661
            +          KA +L+ +V+     N++AA G  +V AE  +   + ++F +++++  
Sbjct: 669 PKEQENAKQSFLKAVQLFQKVLQIDPYNVFAAQGIAIVFAENKRMGPALEIFRKLRDSLD 728

Query: 662 GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ----ILLYLARTHYE 717
                   DV+ N+AH        A A++ Y+  L++F   ++AQ    +L  L +  Y 
Sbjct: 729 NE------DVYCNIAHCLLEMHENAKAVETYEYTLKRF---SNAQNRSRLLNLLGKAWYS 779

Query: 718 A-------EQWQDCKKSLLRAIHLAPSNYT-----LRFDAGVAMQKFS-ASTLQKT---R 761
                   E +Q   K+   A+     N +       F   VA+  F  A TL++    +
Sbjct: 780 RGVREKSYEFFQKALKNAEMALKCEEDNKSSERTIASFQYNVALLHFQIAETLRRATFKQ 839

Query: 762 RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAA--KIHRE 819
           R    +   ++ L++ + +   L  + N ++    E+++   ++  +  + +A  +I +E
Sbjct: 840 RKVVYITDAISGLQSGLDILKELQKSKNFNI--IPEEELEQRIQLGETTMKSALERIAKE 897

Query: 820 AAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQR-V 878
             E E +Q+ +  EA R+     E  R+ +++K+  + + KLE +++  R+ ++  QR +
Sbjct: 898 QEEFELEQSNKLDEA-RKILEENEIERQEKQKKEEEIRQMKLEKQKEEYRKLQDEAQRLI 956

Query: 879 KEQWRSSTPASKRRERSEND 898
           +E+    T   ++ E SEN+
Sbjct: 957 QERESMITAEDEKDELSENE 976


>gi|406605310|emb|CCH43266.1| RNA polymerase-associated protein CTR9 [Wickerhamomyces ciferrii]
          Length = 1093

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 181/372 (48%), Gaps = 38/372 (10%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEAD---RDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           + + ++   +G+ +QA   F+ +L+ D     NV ALLG+A   +N+  Y  SL+ +++ 
Sbjct: 149 LARAEITYQQGQYDQALDYFERILKLDVKSDSNVYALLGKAKTLYNKKNYQTSLKTFQQI 208

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN--VEALVALAVMDLQANE 201
           L ++P      R+GIGL  + L     A +A++R+L++DPEN   + L+ L+  D   + 
Sbjct: 209 LILNPLLKPDPRIGIGLNFWNLKDKKMATKAWERSLEIDPENEVAKLLIVLSKFDSSFDS 268

Query: 202 ------AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
                  +   K +E +Q   +  P   + L  LA++++       V ++ E  L   N 
Sbjct: 269 LTDDDFISTYTKALESLQTLIKTTPENPVLLLLLASYYYSKNDLDSVLKICEKVLQKGNL 328

Query: 256 GPT-KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
                S + + +AR +  + D+  +  ++  S+K +N  +  +    G+GQ Q++ G   
Sbjct: 329 SSNLSSDANFWIARVHFEREDFSNSTKFFAESLK-LNSDN--LLAKLGVGQSQIQRGSIE 385

Query: 315 SALTNFEKVLEIYPDNCETLKA---LGHIYVQ--------LGQIEKAQELLRKAAKIDPR 363
            ++  FE    IY +N + L+    LG +Y Q        +  +EK   L +   K +P 
Sbjct: 386 DSIITFES---IYNNNQKILEIDYILGILYAQDEKNHQKAIAALEKYIRLSKD--KNEPI 440

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE----- 418
               ++ L +L  + D   AL     A  +LKK GE +PIEVLNN+GV HF KG      
Sbjct: 441 ALNTYLTLSKLFENKDNSLALSHLSKALDVLKKRGETIPIEVLNNLGVFHFIKGNPESAN 500

Query: 419 --FESAHQSFKD 428
             FESAHQ+  D
Sbjct: 501 TFFESAHQANTD 512



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 103/485 (21%), Positives = 208/485 (42%), Gaps = 67/485 (13%)

Query: 579  DGKDSYATLSLGNWNYFAALRNEKRAPK-LEATHLE--KAKELYTRVIVQHTSNLYAANG 635
            D  D+YA +SLGN     A   + + P+ LE  +    +  +L+ +V+    +N++AA G
Sbjct: 624  DSHDTYALISLGNLYCSIAREVKGKTPQDLEKKNQSYVRGAQLFQKVLTIDPNNVFAAQG 683

Query: 636  AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 695
              ++  E     V+ + F ++++A      +    V+INL H     G F+ A++ Y+  
Sbjct: 684  IAIIFVENKHSTVALETFRKIRDA------IDDVSVYINLGHCLIEVGQFSKAIESYEIA 737

Query: 696  LRKFYYNT-DAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY-------------TL 741
            LR++   T D++ L  + R  +     +   +S L+++  +   +             +L
Sbjct: 738  LRRYGDETKDSRYLTLVGRAWFARASAEKSLESYLKSLEYSEKAFEVAENTKLKKILPSL 797

Query: 742  RFDAGVAMQKFS-ASTLQK---TRRTADEVRSTVAELENAVRVFSHL------------- 784
            +++  +A  +F+ A  +Q+   ++RT +++   +  L+ A+   + L             
Sbjct: 798  KYN--IAFVQFNIAQFIQRQDISKRTVEDISKALDGLKIAIDTLNELANEKYPPYPADIL 855

Query: 785  ----SAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 840
                S  SN  ++   E+ I    +Y     D  K  +EA E+E  +    +E  ++   
Sbjct: 856  KQRASMGSNTLINQL-ERAIKEQKDYETKFEDKLKAAQEAREKERLKAELEEEKRKEEEA 914

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK--EQWRSSTPASKRRERSEND 898
            A++   KAE    YL    KL+++ K   ++ E F   +  E     +   K+ + + N 
Sbjct: 915  AKQELLKAE----YL----KLQEQAKEWEREREAFIEPEDDEDTGKKSKKGKKSKNAINT 966

Query: 899  DDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYRE--PIG 956
            DDE+   +K  +K  K   K    +        +    D  E PE +   ++ ++     
Sbjct: 967  DDELSDEDKPVKKSRKSSGKKSKRKKDENAINGD----DEEESPEAKKRKLSSKKYKSAD 1022

Query: 957  QMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQLRDN 1016
             + D D+D+E+    +L     +D++ DD +  +      +    E DD E  E +  +N
Sbjct: 1023 IIEDSDEDLEDFDESKLG----DDNEDDDALEKAEAKIDAQGDEKEGDDQEEQEDKKVEN 1078

Query: 1017 TDELQ 1021
             +E Q
Sbjct: 1079 GEEKQ 1083


>gi|299752145|ref|XP_001830731.2| pol II transcription elongation factor [Coprinopsis cinerea
           okayama7#130]
 gi|298409698|gb|EAU91100.2| pol II transcription elongation factor [Coprinopsis cinerea
           okayama7#130]
          Length = 1053

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 162/773 (20%), Positives = 319/773 (41%), Gaps = 143/773 (18%)

Query: 68  ATQYYNKASRIDMHEPS--------TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           A++Y NK+ +     P          ++ +G   LA+   ++A  +F+ VL     N+  
Sbjct: 130 ASKYLNKSQQSLAENPEDDSMGIALPYLSRGIQQLAQQSFDEALRSFEGVLSQSPTNIAR 189

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           +L      F +  Y ++L  Y+  L+  P+C    R+GIG+C + LG   KA+QA+QR+L
Sbjct: 190 VL------FQKKFYKEALRLYQDVLRYKPNCKPDPRVGIGMCLWALGHKEKAKQAWQRSL 243

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRK---------GMEKMQRAFEIYPYCAMALNYLA 230
           +++P   +  + L +  + A+++  I +         G E + R F +    A A N + 
Sbjct: 244 EVNPGGWQVQLLLGIESINASKSQAISEEAKTQAFLSGTEMVGRTFRMNSKNASAANAMC 303

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
                 G++    +L E  +   +     +  Y   AR+ H++G+ ++A  +Y   + ++
Sbjct: 304 EIMIRKGKYQQAMKLAERTIQFADTRTLLAEGYLRAARAAHAQGNLQQARQFYATVLNKL 363

Query: 291 NKPH----EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN---------CETLKAL 337
                   +      G+ Q+Q+   +  +A+   + +++  P+            +L+A 
Sbjct: 364 GDTQKDRSQLTIASIGMAQLQMHYDEAAAAIHTLDTLIQ-QPNTQRSPEAIVMLASLRAC 422

Query: 338 GHIYVQLGQI--EKAQ--ELLRKAAK---ID-------------PRDAQAFIDLGELLIS 377
               V   ++  EKAQ  +L  +A K   ID               D    +++  L   
Sbjct: 423 PRPGVSSSEVAQEKAQARDLFDRALKGLEIDGARHGPSKASLNITDDLDMHLEIARLWQG 482

Query: 378 SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 437
            +T     A+K A  + +  G+  P  ++NN+GV+   +G    A   ++ A      LT
Sbjct: 483 ENTERVYKAYKEAMRISETFGDVDP-RLVNNLGVLEHLEGRLSEARTLYESA------LT 535

Query: 438 LLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 497
            +  + K    D + S                           ++LFNLAR+ E   D  
Sbjct: 536 KVAGQGKG---DEAMS--------------------------TSMLFNLARVYEDEGDVT 566

Query: 498 AASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
            A   Y  +L ++ +Y+DA +R + +  + N    + +L+ + L     +P+ L++    
Sbjct: 567 LAKEAYDKLLSRHPEYIDAKIRQSQMLLSVNKFAEANDLLKQCLSA---HPSNLNLRAAY 623

Query: 558 ------ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK--LEA 609
                  ++  D+   KE   +     D  D Y +L    W +F   R  +   +  LE 
Sbjct: 624 LHFLMQTIRIGDYKSFKEFVFSTLKDHDKHDVY-SLCAAAWLHFFQARESRDVSQKGLEE 682

Query: 610 TH--LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV------------------- 648
                ++A E Y + +       YAA G  +++AE    ++                   
Sbjct: 683 RRKAFQRAAEYYEKALQLDPQCAYAAQGLAIIIAEDALGNLYGAMGSAAPDDHQRRLINV 742

Query: 649 --SKDLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 705
             + D+F +V+E+ + GSV+        N+ H Y+++  F  A++ Y+    +FY N + 
Sbjct: 743 REALDIFAKVRESINDGSVYT-------NMGHCYYSRDEFDRAIESYETASGRFYQNQNY 795

Query: 706 QILLYLARTHYE---AEQWQDCKKSLLR----AIHLAPSNYTLRFDAGVAMQK 751
            +L+ L R+ Y     +Q      + LR    A+H+ P++    ++  +  QK
Sbjct: 796 SVLMCLCRSWYSKAIKDQSPMAMNTALRYAQSALHILPNDKVALYNIAMIQQK 848


>gi|261189494|ref|XP_002621158.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239591735|gb|EEQ74316.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 1246

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 207/915 (22%), Positives = 351/915 (38%), Gaps = 202/915 (22%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ +++    IL  G    +      V  E++ +L  +   Y             G++
Sbjct: 77  YAKQNQIDHAIDILNRG----LSSLAQGVTKEKLGLLGWICWLYMLKSREAPRVAPEGQL 132

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE---------------- 98
            ++ + K+ +   AT   N+ASR++   P  ++ +G L + +                  
Sbjct: 133 VSEAKTKDYYLQAATSTLNEASRLNPAFPPLFLARGVLSILRASLQPPAKTLRPGTVDTS 192

Query: 99  --VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC-- 150
             VE    A K   E+ +     N+ A+LG+A  ++  GRY+++LE Y+  L   P+   
Sbjct: 193 ERVESLRQALKCFDESAKSFGNRNIMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRD 252

Query: 151 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG 204
           P   R+GIG C ++L    +A+ A+ RAL L+PE+  A + L    L        N+ A 
Sbjct: 253 PDP-RIGIGCCLWQLDFKEQAKTAWSRALALNPESKVANILLGAYYLYDSSRHATNDPAF 311

Query: 205 ---IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
               +  M +  Q+AF++     M       +F        VE L   A+ +T+     S
Sbjct: 312 GSLYKIAMTQYTQKAFKLDKEDPMTCAMFGGYFLLRKHFPTVEALARKAIELTDVNAIAS 371

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTN 319
             +Y LAR  H +G+  +A  YY  S +      +   P  +G  Q+Q+K GD+  A   
Sbjct: 372 DGWYLLARKEHFEGNAARANEYYNRSDQARGGSDKGYLPAKFGAVQMQVKTGDYDGAKFR 431

Query: 320 FEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRKA-------- 357
            EK+++    N E++  LG ++ +                +++KA  LL           
Sbjct: 432 LEKIIQ-QTKNPESMTLLGALFAEEVFAAQSSQLKEDKSAEVKKATSLLESVRASWKDEK 490

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFK-----------------------TARTLL 394
            K+ P D    + L  L  S     ++   +                       T + +L
Sbjct: 491 KKLSP-DESVLLYLARLYESGSPDKSMQCLQQVEQMQLAQIPDTERPEDIDDEETVKNML 549

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +   E +  ++LNN+G   +   + E A   F+ AL   +     D  T T  +      
Sbjct: 550 R---ENLAPQLLNNMGCFLYHSEKIELARNMFQTALNACVKSRDRDDSTDTDAL------ 600

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
                                     T+ +NLAR  E       A  +Y  +L ++ DY 
Sbjct: 601 ------------------------VTTISYNLARTYEAAAMPEEAKKVYEGLLERHSDYT 636

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAK 568
           +A  RL  IA       L     +E        P  ++ L +LE  N +      W  +K
Sbjct: 637 EANARLTYIA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSK 682

Query: 569 ETFRAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH--- 611
              + A+ A D +              D Y+   +GN  Y  A R+ +R  + +      
Sbjct: 683 SKRKVANIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTEQDKEKRRK 741

Query: 612 -LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 670
             EKA E + + +     N YAA G  V L      D  KD  T VQ      +F ++ D
Sbjct: 742 VYEKAVEFFDKALQLDPKNAYAAQGIAVAL-----VDDRKDYTTAVQ------IFSRIRD 790

Query: 671 ------VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ-- 722
                 V++NL HVY     F+ +++ Y+  L K     D QIL  L R        +  
Sbjct: 791 TLRDASVYLNLGHVYAELRQFSRSIENYEAALSKD-RQRDTQILACLGRVWLLKGMQENN 849

Query: 723 --------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVA 772
                   DC +   RA  +AP    L F+      + +    +L +++RT  +V++   
Sbjct: 850 LAAMNTALDCTQ---RARAIAPEQIHLEFNVAFVQNQIALLVISLPESQRTLQDVQAASD 906

Query: 773 ELENAVRVFSHLSAA 787
            L+ A+  F  ++ A
Sbjct: 907 GLDEAINTFIQIAKA 921


>gi|259482949|tpe|CBF77911.1| TPA: RNA polymerase II transcription elongation factor (Ctr9),
           putative (AFU_orthologue; AFUA_5G05870) [Aspergillus
           nidulans FGSC A4]
          Length = 1027

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 193/840 (22%), Positives = 327/840 (38%), Gaps = 158/840 (18%)

Query: 56  TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE----------------- 98
           T+ R K+ +   AT   N+ASR++   P  ++ +G L L +                   
Sbjct: 139 TEARTKDYYIQQATGILNEASRLNPSFPPLFLARGVLSLLRASLHPPRPVRPGAVDNSER 198

Query: 99  VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA- 153
           VE    A K   E+ +     N  A+LG+A   +  GRY+++LE Y++ L   P      
Sbjct: 199 VESLRQALKQFDESSKAFGGRNAMAILGRARAHYLLGRYAEALEGYQKVLMRMPGLTDPD 258

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG-- 204
            R+GIG C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A G  
Sbjct: 259 PRIGIGCCLWQLGFKEQAKAAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSL 318

Query: 205 IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
            +  M +  Q+AF++     M      ++F     +  V+ L   ++  T+     S  +
Sbjct: 319 YKVAMTQYTQKAFKLDKEYPMTCALFGSYFLLRKAYSTVDTLARKSIENTDVMQIASDGW 378

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEK 322
           Y L R  H +GD  KA  +Y  S +      +   P  +G  Q+Q+   D+  A    EK
Sbjct: 379 YLLGRKCHYEGDLAKAAEFYHRSDQARGGGDKGYLPAKFGSVQMQVSNKDYDGAKFQLEK 438

Query: 323 VLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKID 361
           +++    N E +  L  +Y +                     +   E  + L +  +K  
Sbjct: 439 IIQ-QTKNPECMTLLAALYAEEVFAAQKSGMKEDKSAEAKKAITLFEAVRALWKDESKKI 497

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE------------------VP 402
             D    + L  L   +    ++        L L +  +E                  +P
Sbjct: 498 TPDESVLVYLSRLYEQNAPDKSMQCLTQLEELQLAEISDEERPEGLEDEEMKAALRVNLP 557

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
            ++LNN+G   ++  +   A   F+ AL      +   S+ +   +D  A +        
Sbjct: 558 PQLLNNMGCFLYQSSQLNMARSMFQAALD-----SCARSQEREGELDTDALV-------- 604

Query: 463 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                             T+ +NL R  E       A  +Y  +L ++ DY +A  RL  
Sbjct: 605 -----------------TTISYNLGRAFEASDMPDEAKKVYEALLERHSDYTEASARLTY 647

Query: 523 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK- 581
           +A  R+      + + +  + +       ++ G        W  +K   RAA+ A D + 
Sbjct: 648 LALRRSPTDEGPKKMAKLYETDSTNLEVRALFG--------WYLSKSKKRAANIAEDHEQ 699

Query: 582 -------------DSYATLSLGNWNYFAALRNEKRAPKLEA----THLEKAKELYTRVIV 624
                        D YA   +GN +   A R+ +R    E        E+A E + + + 
Sbjct: 700 RHHKHTLQYFDKHDRYALTGMGNVHLLFA-RDMRRDTDQEKEKRRKMYERAVEFFDKALQ 758

Query: 625 QHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VWINLAHV 678
               N YAA G  + L      D  KDL T VQ      +F ++ D      V++NL HV
Sbjct: 759 LDPRNAYAAQGIAIAL-----VDDRKDLSTAVQ------IFSKIRDSLRDASVYLNLGHV 807

Query: 679 YFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RA 731
           Y     +  +++ Y+  L K     DAQIL  L R      + E      K+ L    RA
Sbjct: 808 YAELRQYTRSIEHYEAALSKDRAR-DAQILACLGRVWLLKGKQEMSLAAMKTALDYAQRA 866

Query: 732 IHLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
             +AP+   L F+      + ++ T  L +T+RTA +V+     L  AV  F  ++ A N
Sbjct: 867 HSVAPTQAHLEFNVAFVQNQIASLTYSLPETQRTAQDVQDAADGLRTAVETFGRIAQAKN 926


>gi|239608951|gb|EEQ85938.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
 gi|327354032|gb|EGE82889.1| tetratricopeptide repeat domain-containing protein [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 1246

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 206/915 (22%), Positives = 350/915 (38%), Gaps = 202/915 (22%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ +++    IL  G    +      V  E++ +L  +   Y             G++
Sbjct: 77  YAKQNQIDHAIDILNRG----LSSLAQGVTKEKLGLLGWICWLYMLKSREAPRVAPEGQL 132

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE---------------- 98
            ++ + K+ +   AT   N+ASR++   P  ++ +G L + +                  
Sbjct: 133 VSEAKTKDYYLQAATSTLNEASRLNPAFPPLFLARGVLSILRASLQPPAKTLRPGTVDTS 192

Query: 99  --VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC-- 150
             VE    A K   E+ +     N+ A+LG+A  ++  GRY+++LE Y+  L   P+   
Sbjct: 193 ERVESLRQALKCFDESAKSFGNRNIMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRD 252

Query: 151 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG 204
           P   R+GIG C ++L    +A+ A+ RAL L+PE+  A + L    L        N+ A 
Sbjct: 253 PDP-RIGIGCCLWQLDFKEQAKTAWSRALALNPESKVANILLGAYYLYDSSRHATNDPAF 311

Query: 205 ---IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
               +  M +  Q+AF++     M       +F        VE L   A+ +T+     S
Sbjct: 312 GSLYKIAMTQYTQKAFKLDKEDPMTCAMFGGYFLLRKHFPTVEALARKAIELTDVNAIAS 371

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTN 319
             +Y LAR  H + +  +A  YY  S +      +   P  +G  Q+Q+K GD+  A   
Sbjct: 372 DGWYLLARKEHFEDNAARANEYYNRSDQARGGSDKGYLPAKFGAVQMQVKTGDYDGAKFR 431

Query: 320 FEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRKA-------- 357
            EK+++    N E++  LG ++ +                +++KA  LL           
Sbjct: 432 LEKIIQ-QTKNPESMTLLGALFAEEVFAAQSSQLKEDKSAEVKKATSLLESVRASWKDEK 490

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFK-----------------------TARTLL 394
            K+ P D    + L  L  S     ++   +                       T + +L
Sbjct: 491 KKLSP-DESVLLYLARLYESGSPDKSMQCLQQVEQMQLAQIPDTERPEDIDDEETVKNML 549

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +   E +  ++LNN+G   +   + E A   F+ AL   +     D  T T  +      
Sbjct: 550 R---ENLAPQLLNNMGCFLYHSEKIELARNMFQTALNACVKSRDRDDSTDTDAL------ 600

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
                                     T+ +NLAR  E       A  +Y  +L ++ DY 
Sbjct: 601 ------------------------VTTISYNLARTYEAAAMPEEAKKVYEGLLERHSDYT 636

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAK 568
           +A  RL  IA       L     +E        P  ++ L +LE  N +      W  +K
Sbjct: 637 EANARLTYIA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSK 682

Query: 569 ETFRAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH--- 611
              + A+ A D +              D Y+   +GN  Y  A R+ +R  + +      
Sbjct: 683 SKRKVANIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTEQDKEKRRK 741

Query: 612 -LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 670
             EKA E + + +     N YAA G  V L      D  KD  T VQ      +F ++ D
Sbjct: 742 VYEKAVEFFDKALQLDPKNAYAAQGIAVAL-----VDDRKDYTTAVQ------IFSRIRD 790

Query: 671 ------VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ-- 722
                 V++NL HVY     F+ +++ Y+  L K     D QIL  L R        +  
Sbjct: 791 TLRDASVYLNLGHVYAELRQFSRSIENYEAALSKD-RQRDTQILACLGRVWLLKGMQENN 849

Query: 723 --------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVA 772
                   DC +   RA  +AP    L F+      + +    +L +++RT  +V++   
Sbjct: 850 LAAMNTALDCTQ---RARAIAPEQIHLEFNVAFVQNQIALLVISLPESQRTLQDVQAASD 906

Query: 773 ELENAVRVFSHLSAA 787
            L+ A+  F  ++ A
Sbjct: 907 GLDEAINTFIQIAKA 921


>gi|302410999|ref|XP_003003333.1| tetratricopeptide repeat protein [Verticillium albo-atrum VaMs.102]
 gi|261358357|gb|EEY20785.1| tetratricopeptide repeat protein [Verticillium albo-atrum VaMs.102]
          Length = 991

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 191/801 (23%), Positives = 333/801 (41%), Gaps = 148/801 (18%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQR----- 59
           Y KQ  ++   ++L  G +   D    +   E+++++  L   + YL K+    R     
Sbjct: 79  YAKQKNIDHAIEMLVRGGNSMRD----NTPREKLSLIGCL--CWMYLWKVREAPRLPPDG 132

Query: 60  ------EKEEHFI-LATQYYNKASRIDMHEPSTWVGKG--QLLLAKGEVEQASSAFKI-- 108
                 + +EH++ LAT   N ASRI+   P  ++ +G  QLL A  ++ +A+   K+  
Sbjct: 133 VPASEAKTKEHYLQLATSTLNDASRINPAFPPLFLARGVLQLLRASLQIPKATGLGKLDN 192

Query: 109 --------VLEADRD--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
                    L+A  D        N+ A++G+A   F+ G++ +SL  Y+  L   P    
Sbjct: 193 EKADLLRAALKAFEDAIRVSQGKNMLAVMGKARALFSLGKFPESLACYQEVLSKMPDLVD 252

Query: 153 A-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGI 205
              R+GIG C ++LG    AR A++R L+++P++    + L +  L A      N    I
Sbjct: 253 PDPRIGIGACFWQLGFKDDARSAWERCLEINPDHKVGNILLGLYYLDASGHVPTNSPDFI 312

Query: 206 R---KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
           R   K M E  Q++F++     +     AN+F    Q   V+ L   A+  T+     S 
Sbjct: 313 RLYKKAMTEYTQKSFKLDKNMPLTCATFANYFLSRKQLGTVDTLAHKAIQYTDVNAIASD 372

Query: 262 SYYNLARSYHSKGDYEKAGLYYMAS------------VKEI-----NKPHEF-------- 296
            +Y LAR  H +GD  KA  YY  +             +++     +K HE         
Sbjct: 373 GWYLLARKEHHEGDPSKASDYYRRADDARGGADPRLPARQVWRCPQSKHHEALVLLGTLY 432

Query: 297 ---IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
              +F    L   + K  + + A+   E V   + D+ + LK    + + L ++ +A+  
Sbjct: 433 AEEVFANQDLDAKEDKSAETKKAIGLLESVRGAWRDSKKNLKPDAAVLLNLARLYEAEH- 491

Query: 354 LRKAAKIDPRDA-QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE-VPIEVLNNIGV 411
                   P  A Q  + + +L +   + A     +T     KKA    +P ++LNNIG 
Sbjct: 492 --------PDKALQCLLQVEQLEMDLVSAADRPPPETDEAETKKALRRFLPPQLLNNIGC 543

Query: 412 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
            + +    E A + F+ AL   +    L  K +   +DA  +                  
Sbjct: 544 FYSQSERHEQASELFEAALDACM---KLGEKDEDADVDALVT------------------ 582

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
                    T+ FNL R  E       A  +Y  +L ++ DY DA +RLA I   +   +
Sbjct: 583 ---------TISFNLGRSYESRGMLDDAVKVYEELLKRHDDYTDARVRLAYIKLRKFPHK 633

Query: 532 LSIELVNEALKVN--------------GKYPNALSMLGDLELKNDDWVKAKETFRAASDA 577
              E V++  K N              GK P+     G++  ++D++   K T R     
Sbjct: 634 EGPEAVSKLYKENARDLEVRALYGWYLGKVPSR-KRSGNIN-EDDEFRHYKHTLR----D 687

Query: 578 TDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAAN 634
            D  D YA +  GN +   A  +R +  + K + + +  KA E + + +     N YAA 
Sbjct: 688 HDKHDRYALVGAGNLHLLTAREMRRDSDSDKAKRSAMYTKAVEFFEKALSLDPLNAYAAQ 747

Query: 635 GAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 693
           G  + L E +  +  +  +F ++++       V+   V++NL H+Y     ++ A++ Y+
Sbjct: 748 GIAIALVEDRKDYKTALGIFVKIRDT------VKDAHVFVNLGHIYAELRQYSKALENYE 801

Query: 694 NCLRKFYYNTDAQILLYLART 714
             L K   + D  IL  L RT
Sbjct: 802 TALSKEGKSNDPVILACLGRT 822


>gi|326468698|gb|EGD92707.1| tetratricopeptide repeat protein [Trichophyton tonsurans CBS
           112818]
          Length = 1203

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 204/907 (22%), Positives = 359/907 (39%), Gaps = 184/907 (20%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------G 52
           Y KQ +++   +IL  G    +         ER+++L    + + YL            G
Sbjct: 80  YAKQKQIDHAIEILTRG----LASLAHGATKERLSLLG--WICWLYLIKSRQAPRVASEG 133

Query: 53  KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-------------- 98
           ++ ++ + KE +   AT   N+ASR++   P  ++ +G L + +                
Sbjct: 134 QLHSEAKTKEFYLQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPLRPGTVD 193

Query: 99  ----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
               VE    A K   E+ +     N+ A+LG+A   +  GRY+++LE  + AL   PS 
Sbjct: 194 TSERVESLQQAIKCFDESAKAFGGRNIMAILGRARANYMLGRYAEALEGCQEALVKMPSM 253

Query: 151 --PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE------- 201
             P   R+GIG C ++L    +A+ A+ RAL L+P++  A + LA   L  +        
Sbjct: 254 RDPDP-RIGIGCCLWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTSDP 312

Query: 202 --AAGIRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 258
             ++  +  M +  Q+AF++     M      ++F        VE L   A+ +T+    
Sbjct: 313 EFSSLYKTAMTQYTQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNAI 372

Query: 259 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSAL 317
            S  +Y LAR  H++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A 
Sbjct: 373 ASDGWYLLARKEHTEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGAK 432

Query: 318 TNFEKVLEIYPDNCETLKALGHIYV------------QLGQIEKAQELL---RKAAKIDP 362
              EK+++    N E +  LG +Y             +  + +KA  LL   R + K D 
Sbjct: 433 FRLEKIIQ-QTKNPEAMALLGSLYADEVFAAANSKEDKSAEAKKAISLLESVRTSWKADK 491

Query: 363 R----DAQAFIDLGELLISSDTGAAL--------------------DAFKTARTLLKKAG 398
           +    D    + L  L  +S    ++                    D  +  + +     
Sbjct: 492 KKLTPDESVLLYLARLYETSAPDKSMQCLNQVEEMQLAQIPDDEKPDNVEGEQAMTDILR 551

Query: 399 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD--SKTKTYVIDASASMLQ 456
           E +  ++LNNIG   ++  + E A    + AL   +     +  S T  YV         
Sbjct: 552 ERLSPQLLNNIGCFLYQADKIEQARMMLQTALNACVQAQEREDASDTDAYV--------- 602

Query: 457 FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 516
                                   T+ +NLAR  E       A   Y  +L ++ DYV+A
Sbjct: 603 -----------------------TTISYNLARTYEAAGMLDEAKKAYEGLLERHSDYVEA 639

Query: 517 YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKET 570
             RL  I+  +++              +G+    ++ L + E  N +      W   K  
Sbjct: 640 NARLTYISLRQDS--------------SGEGAKKMTKLYETEASNMEVRALYGWYLNKTK 685

Query: 571 FRAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----L 612
            R A+ A D +              D YA   +GN  Y    R+ +R  + E        
Sbjct: 686 RRVANLAEDHEQRHYKHTLQGYDKHDRYALTGMGNL-YLLTGRDMRRDGEQEKEKRHKIY 744

Query: 613 EKAKELYTRVIVQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDV 671
           EKA E + + +     N YAA G  + L  ++  +  +  +F++V++    S       V
Sbjct: 745 EKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDYSTAVQIFSKVRDTLRDST------V 798

Query: 672 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSL 728
           ++NL HV+     F  +++ Y+  L K     DAQIL  L R  +   + EQ     K+ 
Sbjct: 799 YLNLGHVFAELRQFTKSIENYEISLSKDRAR-DAQILACLGRVWFLKGKQEQNLTAMKTA 857

Query: 729 L----RAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFS 782
           L    RA   AP    L F+      + +  A +L + ++++++V   +  L  A+  F 
Sbjct: 858 LEYAERARSAAPDQIHLEFNIAFVQNEIALLAISLPEAQKSSEDVEEAMNGLTAAIEAFD 917

Query: 783 HLSAASN 789
            ++++ N
Sbjct: 918 KIASSKN 924


>gi|302696115|ref|XP_003037736.1| hypothetical protein SCHCODRAFT_71544 [Schizophyllum commune H4-8]
 gi|300111433|gb|EFJ02834.1| hypothetical protein SCHCODRAFT_71544 [Schizophyllum commune H4-8]
          Length = 939

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 197/902 (21%), Positives = 362/902 (40%), Gaps = 178/902 (19%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIET------- 56
           EY++ G+++   Q+ E G    I+   A      ++ L+AL +    L ++ +       
Sbjct: 21  EYWRLGRLDDAEQLAESG----IEVLTAKGMSHGLSALHAL-LSNIQLARVRSAPKVILP 75

Query: 57  -------KQREKEEHFILATQYYNKASRID--MHEPSTWVGKGQLLLAKGEVEQASSAFK 107
                   ++ KE++   ATQ+ N  +     +   +  + +  + L+   ++ A  +F 
Sbjct: 76  DAKMDILHEKTKEDYHGSATQHLNHCAEDSEYLSGQTCMLTRAIMQLSTRAIDDALKSFD 135

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
            VL     N  AL+G+A +     ++ ++L+ ++  LQ++P+C    R+GIG+C + LG 
Sbjct: 136 FVLTKWPTNFVALMGKARILLLHRKHREALKLFQHVLQLNPNCKPDPRIGIGMCLWSLGY 195

Query: 168 LGKARQAFQRALQLDPEN--VEALVAL-----AVMDLQANEAAG--IRKGMEKMQRAFEI 218
             KAR A+QR+ +LDP +  V  L+ L     A+ D + +E A   +   + ++  AF+ 
Sbjct: 196 KDKARLAWQRSHELDPTDWSVNLLLGLYEYNAAMSDEETDEYATLLVESSLARITSAFKK 255

Query: 219 YPYCAMALNYLANHFFFTGQHFLVE-----QLTETALAVTNHGPTKSHSYYNLARSYHSK 273
               A A N LA       +   V      +L E  +   +        +  LAR  H  
Sbjct: 256 NNKSAAASNILAEILLLKKEKGKVRPMEAMKLAERTIQFADTLSMLHEGHLRLARVAHRN 315

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--YPDNC 331
           GD   A   Y  +VK  N     +    GL Q+Q+   +  +A+   + ++++    D  
Sbjct: 316 GDNAMAMKNYEVAVKSKN-----VLASIGLAQMQMLNDEIPAAIHTLDTLVKLPEAKDVP 370

Query: 332 ETLKALGHI--YVQLG--------QIEKAQELL-----------RKAAKIDPRDAQAFID 370
           E L  L  +  Y + G        +  +A+EL            R+   +   D   +I+
Sbjct: 371 EALVMLASLRAYHRPGISSSDLAKERARARELYTRISSLIADGARRVPAVVASDPDMYIE 430

Query: 371 LGELLISSDTGAALDAF-KTARTLLKKAG--EEVPIE--VLNNIGVIHFEKGEFESAHQS 425
           + +L  + +    L+A  + AR     A   EE P++  ++NN GV+H  +G+ E A   
Sbjct: 431 IAQLWQADNRPRTLEALEQAARVCTTPAAGVEERPVDPRLMNNQGVLHHMQGKHEPAVVL 490

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
           ++ A+            TKT  +     M+                         T+L+N
Sbjct: 491 YRQAI------------TKTLQLGPEGEMM-----------------------GATMLYN 515

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
           L R+ E   D +AA   Y  +L  + +YVDA +R A +    N    + +L+ +AL+   
Sbjct: 516 LGRVYEDSRDDLAAKEAYDKLLELHPEYVDAKIRQAHMLIGINKHNEAHDLLKQALQSQP 575

Query: 546 KYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW----------NYF 595
            + N  +               KE   A     D  D YA  + G            N  
Sbjct: 576 SHGNLRAYYTYFLSTTHPPRITKEFVFATLKDHDKNDVYALCAAGAAHYAQARESRDNSS 635

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK----- 650
             L + KR       + ++A E Y R +   +    AA G  +  AE     +S+     
Sbjct: 636 KGLEDRKR-------NFQRAVECYDRALHIDSRCAVAAMGLAIATAEDALDTLSRGKTEM 688

Query: 651 --------------------DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 690
                               DLF +++E+          +V+IN+ H +F +  F  A+ 
Sbjct: 689 NPAARQREELARRKQHGEALDLFGKIRESLDSG------NVYINIGHSHFFREEFDKAIA 742

Query: 691 MYQNCLRKFYYNTDAQILLYLARTHYE-------------------AEQWQDCKKSLL-- 729
            Y++ L+   +     +LLYLAR  Y                    AE+    KK+L   
Sbjct: 743 QYESALKHLGHR-HVPLLLYLARAWYTRGTRMKRGMEPRNLMKKEWAERISHIKKALAYA 801

Query: 730 -RAIHLAPSNYTLRFDAGVAMQK----FSASTLQKTRRTADEVRSTVAELENAVRVFSHL 784
            +A+H++P +  ++++  +  QK       + +Q  +R  D ++  +     A ++++ L
Sbjct: 802 EKALHVSPGDKAIQYNIAMITQKPAELLLNAQIQPHQRELDTLQWAIDCAHTAQKLYAAL 861

Query: 785 SA 786
           SA
Sbjct: 862 SA 863


>gi|58263296|ref|XP_569058.1| Pol II transcription elongation factor [Cryptococcus neoformans var.
            neoformans JEC21]
 gi|134108682|ref|XP_776994.1| hypothetical protein CNBB5210 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50259677|gb|EAL22347.1| hypothetical protein CNBB5210 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57223708|gb|AAW41751.1| Pol II transcription elongation factor, putative [Cryptococcus
            neoformans var. neoformans JEC21]
          Length = 1186

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 226/938 (24%), Positives = 389/938 (41%), Gaps = 180/938 (19%)

Query: 82   EP-STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 140
            EP S  +GK    LA G+   A    + +L+   +N+ AL  QA ++F R  +  +L+ Y
Sbjct: 154  EPVSLTMGKVIHYLATGQPGLAHPLVERLLQRQPNNLMALTAQARLQFARRSHLQALQTY 213

Query: 141  KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 200
            ++ L + P      R+G+GLC ++LG   KAR A++RAL+ +P +   L+ L +  L   
Sbjct: 214  QKLLTLAPEMSPDPRIGLGLCFWQLGDRAKARTAWERALEREPGSWVCLLLLGLASLNDA 273

Query: 201  EAAGIRK---------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQH--FLVEQLTETA 249
                I +         G+  +Q+AF++    + +   LA+     GQ    L  +L E A
Sbjct: 274  RQPSIPRTERLKLETEGVGFVQKAFKLNNKSSASALALASVSGQGGQSQLPLASKLAERA 333

Query: 250  LAVTNHGPTKSHSYYNLARSYHSK-----GDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
            +    +   K H+   LA S   +     GD   AG Y +A+VK+ +     I     LG
Sbjct: 334  V---QYADNKRHAV--LANSERGRLGFMAGDLADAGTY-IAAVKKEDPNAVNIIAELTLG 387

Query: 305  QVQLKLGDFRSALTNFEK------------------VLEIYP------DNCETLKALG-- 338
            Q+ +K G+ R AL   E+                   L  YP      D     + L   
Sbjct: 388  QMAIKSGNLREALNYIEQTAKRLNGQGPLEYTVLHACLLAYPHPGMSHDEVVRNRTLARN 447

Query: 339  -----HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 393
                 H  V   + E     LR        DA  F+DL +L    +   A+ A++TA ++
Sbjct: 448  MLTEVHNLVASAETEADWAKLRGVGS----DADVFVDLAKLWQGENVEKAIGAYQTALSI 503

Query: 394  L--------KKAGEEVP----IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 441
            +        ++ G + P    + + +N+G ++  +G  E+A + +++AL           
Sbjct: 504  ITDNDLDSAQEPGLDPPSFTALRLSDNLGALYHLEGNVETAERMYQEAL----------Q 553

Query: 442  KTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASV 501
            K  T                       +G   E    K  + +NL R  E+  D   A+ 
Sbjct: 554  KIAT----------------------QEGKEAETL--KTVLAYNLGRAYEEGGDHAKAAQ 589

Query: 502  LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK-------VNGKYPNALSML 554
             YR +L ++ ++V++ +RLA IA +      +  L+ E L+       +   Y N L  +
Sbjct: 590  WYRDVLRQHPEHVESKVRLALIATSAGRHFDAHTLLKECLQSDENNLILRSVYTNFLITI 649

Query: 555  GDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE- 613
            G          +    F   +   D  D++   +LG W +F  L  E ++P+  A   + 
Sbjct: 650  GS--------YREAFAFTTQTLKVDKSDAWTFCALG-WLHFT-LGREAKSPQELAERPKQ 699

Query: 614  --KAKELYTRVIVQHTSNLYAANGAGVVL-------------AEKGQFDV-----SKDLF 653
              ++ E Y R ++       AA G  + L             AE+G+        +  +F
Sbjct: 700  YLRSAEAYERALIIDPKCAMAAQGLAIALVEDSLALRGTNYGAEEGKVRARLAGQTLGIF 759

Query: 654  TQVQEA-ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 712
             +++++ A G+V V       NL H YF +G    A++ Y      F    D  +LLYLA
Sbjct: 760  GRIKDSLAEGAVNV-------NLGHCYFIRGEEEKAIESYMTASNAFD-EKDVNVLLYLA 811

Query: 713  RTHY----EAEQWQDCKKSL---LRAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRT 763
            R  Y        +    K+L    +A+H+ P++  + ++  +  QK +    +L  ++RT
Sbjct: 812  RAWYALANRESNFSAMNKALDYCQKAMHIHPADRAILYNIAMIQQKAAEMLFSLDCSKRT 871

Query: 764  ADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAK-------- 815
             +E+   + + + AV  F  L+   +  L  +D +  +    Y + LL  A         
Sbjct: 872  LEELTIALKQAQQAVDTFRSLADDRSGSLP-YDAELADQRARYGEGLLRRAAGEMTKQEA 930

Query: 816  IHREAAEREEQQNRQRQEAARQAALAEEARR-----KAEEQKKYLLEKRKLEDEQKRLRQ 870
               EA  R E+  R R E   +   AEEAR+     KAEE    + E+R+   E+ +  Q
Sbjct: 931  YQGEALARVEEARRLRAEEQARIQAAEEARQAELRIKAEE----IAEQRRKAREEAQAWQ 986

Query: 871  QEEHFQRVKEQWRSSTPASKRRERSEN--DDDEVGHSE 906
            +E   ++ +E+ R +    KR+ R E   D  E G  E
Sbjct: 987  EELAARQAEEEARRAAIVEKRKRRKEGIADSGEDGEGE 1024


>gi|308802694|ref|XP_003078660.1| TPR-containing nuclear phosphoprotein that regulates K(+) uptake
           (ISS) [Ostreococcus tauri]
 gi|116057113|emb|CAL51540.1| TPR-containing nuclear phosphoprotein that regulates K(+) uptake
           (ISS) [Ostreococcus tauri]
          Length = 332

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 171/355 (48%), Gaps = 32/355 (9%)

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT---KSHSYYN 265
           M  ++RAF + P+     N +A++   + ++  VE LT  A  + N+G +   ++ + +N
Sbjct: 1   MRLLERAFSLDPHNQAVNNAIADNLLMSEEYDKVEALTRAA--IQNNGESARNRAKAAFN 58

Query: 266 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
            AR+ H++G   +A   Y A+ +       ++ PY+GLGQ+ L   D ++A ++  K  +
Sbjct: 59  QARALHARGAIPQAKALYGAATQ---LDESYVPPYFGLGQIALAAHDVKTAWSHMNKAHK 115

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 385
            + ++    +   H+    G+ E+A E+ R+  K    D +A ++LGELL   D   +L 
Sbjct: 116 EFGESITVTRMFAHLCASTGKSEQAAEMFREVVKQGGSDLEAMLELGELLEEEDPKGSLK 175

Query: 386 AFKTARTLLKKAGEEVPIEVL-NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTK 444
           A++ A  +L   GE+ P+  + NNIGV+  + G+F+ A ++F  AL              
Sbjct: 176 AYRAALKILDARGEDGPLTAIHNNIGVMSSQLGKFDEAREAFTKAL-------------- 221

Query: 445 TYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 504
                     L     QL  + +       LP    ++ FNLA L E   D  AA   Y 
Sbjct: 222 --------ESLGGDSDQLAGKLKGANAKKVLPPGVASIAFNLALLEENQGDNAAAETRYN 273

Query: 505 LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 559
            +L    DY+D+ LR A I   R +  L++E  NEA+       +A++ LG L+L
Sbjct: 274 ALLMAQPDYIDSILRQAKIRAERGDYDLALERTNEAIVAKSDSADAVA-LGWLDL 327


>gi|81294210|gb|AAI07917.1| Ctr9 protein [Rattus norvegicus]
          Length = 493

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 117/199 (58%), Gaps = 11/199 (5%)

Query: 670 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 729
           DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL
Sbjct: 2   DVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLL 61

Query: 730 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
           +A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +
Sbjct: 62  KARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD 121

Query: 790 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAE 842
                FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  L E
Sbjct: 122 KMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKE 179

Query: 843 E--ARRKAEEQKKYLLEKR 859
           +   R + +E++K LLE+R
Sbjct: 180 QEEKRLREKEEQKKLLEQR 198


>gi|67903702|ref|XP_682107.1| hypothetical protein AN8838.2 [Aspergillus nidulans FGSC A4]
 gi|40740936|gb|EAA60126.1| hypothetical protein AN8838.2 [Aspergillus nidulans FGSC A4]
          Length = 1467

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 191/836 (22%), Positives = 326/836 (38%), Gaps = 146/836 (17%)

Query: 54   IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE--------------- 98
            + T+ R K+ +   AT   N+ASR++   P  ++ +G L L +                 
Sbjct: 577  LGTEARTKDYYIQQATGILNEASRLNPSFPPLFLARGVLSLLRASLHPPRPVRPGAVDNS 636

Query: 99   --VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
              VE    A K   E+ +     N  A+LG+A   +  GRY+++LE Y++ L   P    
Sbjct: 637  ERVESLRQALKQFDESSKAFGGRNAMAILGRARAHYLLGRYAEALEGYQKVLMRMPGLTD 696

Query: 153  A-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG 204
               R+GIG C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A G
Sbjct: 697  PDPRIGIGCCLWQLGFKEQAKAAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFG 756

Query: 205  --IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
               +  M +  Q+AF++     M      ++F     +  V+ L   ++  T+     S 
Sbjct: 757  SLYKVAMTQYTQKAFKLDKEYPMTCALFGSYFLLRKAYSTVDTLARKSIENTDVMQIASD 816

Query: 262  SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNF 320
             +Y L R  H +GD  KA  +Y  S +      +   P  +G  Q+Q+   D+  A    
Sbjct: 817  GWYLLGRKCHYEGDLAKAAEFYHRSDQARGGGDKGYLPAKFGSVQMQVSNKDYDGAKFQL 876

Query: 321  EKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAK 359
            EK+++    N E +  L  +Y +                     +   E  + L +  +K
Sbjct: 877  EKIIQ-QTKNPECMTLLAALYAEEVFAAQKSGMKEDKSAEAKKAITLFEAVRALWKDESK 935

Query: 360  IDPRDAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGEE------------------ 400
                D    + L  L   +    ++        L L +  +E                  
Sbjct: 936  KITPDESVLVYLSRLYEQNAPDKSMQCLTQLEELQLAEISDEERPEGLEDEEMKAALRVN 995

Query: 401  VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 460
            +P ++LNN+G   ++  +   A   F+ AL      +   S+ +   +D  A +      
Sbjct: 996  LPPQLLNNMGCFLYQSSQLNMARSMFQAALD-----SCARSQEREGELDTDALV------ 1044

Query: 461  QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL 520
                                T+ +NL R  E       A  +Y  +L ++ DY +A  RL
Sbjct: 1045 -------------------TTISYNLGRAFEASDMPDEAKKVYEALLERHSDYTEASARL 1085

Query: 521  AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDG 580
              +A  R+      + + +  + +       ++ G        W  +K   RAA+ A D 
Sbjct: 1086 TYLALRRSPTDEGPKKMAKLYETDSTNLEVRALFG--------WYLSKSKKRAANIAEDH 1137

Query: 581  K--------------DSYATLSLGNWNYFAALRNEKRAPKLEA----THLEKAKELYTRV 622
            +              D YA   +GN +   A R+ +R    E        E+A E + + 
Sbjct: 1138 EQRHHKHTLQYFDKHDRYALTGMGNVHLLFA-RDMRRDTDQEKEKRRKMYERAVEFFDKA 1196

Query: 623  IVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 682
            +     N YAA G  + L      D  KDL T VQ  +     ++   V++NL HVY   
Sbjct: 1197 LQLDPRNAYAAQGIAIALV-----DDRKDLSTAVQIFSKIRDSLRDASVYLNLGHVYAEL 1251

Query: 683  GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLA 735
              +  +++ Y+  L K     DAQIL  L R      + E      K+ L    RA  +A
Sbjct: 1252 RQYTRSIEHYEAALSKDRAR-DAQILACLGRVWLLKGKQEMSLAAMKTALDYAQRAHSVA 1310

Query: 736  PSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
            P+   L F+      + ++ T  L +T+RTA +V+     L  AV  F  ++ A N
Sbjct: 1311 PTQAHLEFNVAFVQNQIASLTYSLPETQRTAQDVQDAADGLRTAVETFGRIAQAKN 1366


>gi|124087400|ref|XP_001346840.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145474967|ref|XP_001423506.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057229|emb|CAH03213.1| Conserved hypothetical protein, TPR domain [Paramecium tetraurelia]
 gi|124390566|emb|CAK56108.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1084

 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 174/819 (21%), Positives = 328/819 (40%), Gaps = 122/819 (14%)

Query: 37  RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAK 96
           +I I N+L +YY      +    +  ++F    + +N + + D     T+  KG     K
Sbjct: 80  KIRIYNSLSLYYLIQATRQDGFDKASDYFDNVVKNFNLSDKYDF-VSHTFSIKGLFSFYK 138

Query: 97  GEVEQASSAFKIVLEA-----DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           G+ +Q  S ++   +      D  +V   +G A   F  G Y DSL+++KRAL+  P+  
Sbjct: 139 GDKDQTFSYYRTSFDETSSARDTLSVTPCIGTAQAYFAVGNYKDSLQYFKRALKHKPNIA 198

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
           G  RLG+  C Y L Q   A  AF+R LQL+P NVEA + LAV+   A +     +   +
Sbjct: 199 GKARLGLAYCYYNLEQYSLAYYAFKRVLQLEPRNVEAHIGLAVL---AFDKGDYDEYFNR 255

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQH-------------------FLVEQLTETALAV 252
           + +AF I     + L +L+ H+ F   +                   F  ++ ++     
Sbjct: 256 LCKAFTINQNHPITLYHLSEHYLFKLDYQRAMICIQNGLKALDNVSRFQFKEKSQEDQFR 315

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
            +    K    Y +      +G+YE++  YY    K+ N+ +  +     LG  QL L  
Sbjct: 316 NDWSQLKCRYLYLIGLIKQIEGEYEQSLKYY-NQAKQYNRNNVLVL----LGLSQLYLNP 370

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ--------ELLRKAAKIDPRD 364
                T   K+ E      E    +  +Y QL  I+           E  RKA + + +D
Sbjct: 371 QSQNYTESYKLAEKIAKQYENTDFMWELYKQLAYIQSKNLQIRKPVIETYRKALQYNDKD 430

Query: 365 AQAFIDLGELLISSDTGA--------ALDAFKTART--LLKKAGEEVPI-EVLNNIGVIH 413
            +  I+  + + + D            L  F   +   +L+K  E++   E+  N+GV H
Sbjct: 431 FETLIEFAQQIENEDASTYYQTAEDLLLSKFNNQKNTMILQKITEQIIFPELYINMGV-H 489

Query: 414 FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 473
               +   A +S++          + + +   YV+D +               E     V
Sbjct: 490 LANTDLLKALKSYEKCQQ-----LIEEFQIPDYVVDTTE--------------EASKQEV 530

Query: 474 ELPWN--KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
           +L  N  ++ + FN   L+EQ+ D V A  L++  +     ++D+Y+RL+        LQ
Sbjct: 531 QLKKNMYQIVLSFNKGILMEQLGDYVTAMELHQQCIKINPYFIDSYVRLSY-------LQ 583

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD--------------- 576
             +          G Y +AL  + D ++  + +V     ++  +                
Sbjct: 584 FHL----------GDYKDALRTISDSKIYYEQYVNHNRNYKGQNPVPMIHGYIAYQLQDQ 633

Query: 577 --ATD-----GKDSYATLSLGNWNY-FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTS 628
             A D     G+D Y+ + L   +Y  AA + +    + +   L +      +++     
Sbjct: 634 GGAVDQFKRYGEDCYSKIFLMAHDYQLAADKTKNDDQQFKKKVLRQIASTGMKLLQHEPK 693

Query: 629 NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA--HVYFAQGNFA 686
           NL AA    +V+AE G++  + +L   +QE A      Q P +  NLA         N  
Sbjct: 694 NLQAAITLILVIAELGKYTEALNLLGDLQEYAH-----QQPRILSNLAILDCLIMPNNNQ 748

Query: 687 LAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAG 746
            A   ++    K  Y  D    L +A+ +   +++++    + R I   P +   R +  
Sbjct: 749 SAKTYFKKYYEKTNYKPDEHTDLAVAKMYLNNKKYRESANVIKRQILNNPGDLKHRLNLN 808

Query: 747 VAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS 785
           + + ++    +Q+ + +   +R+ V   +  ++ + ++S
Sbjct: 809 MVVHQYCYE-IQEEKCSYKLLRTAVTYFKCLLKSYEYMS 846


>gi|121712616|ref|XP_001273919.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus clavatus NRRL 1]
 gi|119402072|gb|EAW12493.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus clavatus NRRL 1]
          Length = 1229

 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 239/1027 (23%), Positives = 413/1027 (40%), Gaps = 210/1027 (20%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ T+ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 134  GELYTEAKTKDHYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPARPGSVD 193

Query: 99   ----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A++G+A  ++  GRY+++LE Y++ L   P+ 
Sbjct: 194  TSERVESLRQALKCFDESSKAFGGRNVMAIMGRARAQYLLGRYAEALEGYQKVLMKMPTL 253

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A
Sbjct: 254  TDPDPRIGIGCCLWQLGFKDQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPA 313

Query: 203  AG--IRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G   +  M +  Q+AF++     M       +F     +  VE L   A+  T+     
Sbjct: 314  FGSLYKVAMTQYTQKAFKLDKEYPMTCALFGGYFLLRKSYSTVETLARKAIERTDVMSIA 373

Query: 260  SHSYYNLARS------------YHSKGD--------------------------YEKAGL 281
            S  +Y L R             Y+S+ D                          Y+ A  
Sbjct: 374  SDGWYLLGRKAHYEGDLAHAAEYYSRSDQARGGGEKGYLPAKFGAVQMQVSNQSYDDAKF 433

Query: 282  YYMASVKEINKPH----------EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
                 +++   P           E +F     G  + K  + + A++  E V  ++ D  
Sbjct: 434  RLEKIIQQTKNPECMILLGALHAEEVFAAQRSGSKEDKSAEAKKAISLLESVRSLWKDEG 493

Query: 332  ETLKALGHIYVQLGQIEKAQELLRKAAKIDP-RDAQAFIDLGELL---ISSDTGA-ALDA 386
            + +     + V L ++ +         +I P +  Q    L E+    IS D     ++ 
Sbjct: 494  KKIVPDESVLVYLSRLYE---------QIAPEKSMQCLTQLEEMQLAEISEDERPEGIED 544

Query: 387  FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 446
                + +L+     +P  +LNN+G   ++  + E A   F+ AL                
Sbjct: 545  EAEIKAVLRA---NLPPPLLNNMGCFLYQAEKIEQARALFQAAL---------------- 585

Query: 447  VIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLI 506
              DA A   Q KD QL      D + +       T+ +NL R  E  +    A   +  +
Sbjct: 586  --DACARS-QEKDPQL------DTDAL-----VTTISYNLGRAYEASNMQEEAKKAFERL 631

Query: 507  LFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWV 565
            L ++ DY +A  RL  IA       L     +E  K   K   A S   +LE++    W 
Sbjct: 632  LERHSDYTEANARLTYIA-------LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWY 682

Query: 566  KAKETFRAASDATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEA 609
             +K   RAA+ A D +              D Y+   +GN +   A  +R +    K + 
Sbjct: 683  LSKSKKRAANLAEDHEQRHFKHTLQYYDKHDRYSLTGMGNVHLTTARDMRRDTDQDKDKR 742

Query: 610  THL-EKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQ 667
              + E+A E + + +     N YAA G  + L + K     +  +F++V++       ++
Sbjct: 743  RKMYERAVEFFDKALQLDPKNAYAAQGIAIALVDDKKDHASAVHIFSKVRDT------LR 796

Query: 668  MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDC 724
               V++NL HVY     ++ +++ Y+  L K     DAQIL  L R      + E     
Sbjct: 797  DASVYLNLGHVYAELRQYSRSIEHYEAALSKDRAR-DAQILACLGRVWLLKGKQEMSLSA 855

Query: 725  KKSLL----RAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAV 778
             K+ L    RA  +APS   L F+      + +  A +L +T++T  +V      L  AV
Sbjct: 856  MKTALDYAQRAHAVAPSQAHLEFNVAFVQNQIASLAYSLPETQKTVQDVEEAAEGLHQAV 915

Query: 779  RVFSHLSAASNL-HLHGFDEKKINTHVEYCKHLLDAAKIHRE-----------AAEREEQ 826
              F  ++   N  +  G  E++ N      K L  A +  RE           A E  E 
Sbjct: 916  ETFGRIAQVKNPPYPAGALEQRANMGKTIIKQLERALQSQREYEEKNAAKLQQAREAREA 975

Query: 827  QNRQRQEAARQAALAEEARRK--AEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRS 884
            + R+R+   R+A  AE+ R+K  AEE+++ + E ++L ++    R +EE  +   E    
Sbjct: 976  EIRKREAEVRKAQEAEQTRKKKLAEERQQMIEEAQRLAEQ----RAEEEKAREDAEMTTD 1031

Query: 885  STPASK---------RRERSENDDDEV--GHSEKRRRKG----------GKRRKKDKSSR 923
            S    K         +R++   DDD +  G + +R R G           KRR+ ++ S 
Sbjct: 1032 SETGDKVRRKKKATMKRKKKRADDDFISDGETPRRARSGEAESEGEAAPKKRRRLERRSG 1091

Query: 924  SHYETEY 930
               +++Y
Sbjct: 1092 GKAQSKY 1098


>gi|392577115|gb|EIW70245.1| hypothetical protein TREMEDRAFT_68569 [Tremella mesenterica DSM 1558]
          Length = 1175

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 212/937 (22%), Positives = 379/937 (40%), Gaps = 169/937 (18%)

Query: 53   KIETKQREKEEHFILATQYYNKASRIDM-------HEP-STWVGKGQLLLAKGEVEQASS 104
            K+ +  + KE+HF  A    NKA +  M        EP +  +GK  L LA+G+   A  
Sbjct: 129  KLPSNVKVKEDHFTEAAANLNKADQALMASGAGPDDEPIAVPMGKIILYLARGQPGTAQP 188

Query: 105  AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
              + +L    +N+ AL   A ++F R  +  +L+ Y++ L + P      R+GIGLC + 
Sbjct: 189  MVERLLRRQPNNLVALTAHARLQFARRAHEQALQTYQKLLSLDPEMRPDPRIGIGLCLWM 248

Query: 165  LGQLGKARQAFQRALQLDPENVEALVALAVMDLQ-ANEAAG--------IRKGMEKMQRA 215
            LG   KAR A++RALQ DP +   ++      L  A E A         I +G+  +Q A
Sbjct: 249  LGDKQKARLAWERALQRDPSSWTCMLLTGFAALNTAREPATAEDDRAQLIAEGVAYVQSA 308

Query: 216  FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
            F++    A A   LA+     GQ  +  +L E A+    +   K H+   LA +   +  
Sbjct: 309  FKLNNKNAAAALTLASVSGQNGQTAVASKLAERAI---QYADNKRHAV--LANTERGRMG 363

Query: 276  YEKAGLY----YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV-------- 323
            +    L     ++ + ++ +     I     L Q+ ++ G+ R AL   + +        
Sbjct: 364  FIMQDLVDATPFLTAARQDDGGVPNILADLTLAQIAIQGGNLREALNFMDGLTPRLVGKG 423

Query: 324  ----------LEIYPDNCETLKALGH-------IYVQLGQIEKAQELLRKAAKID--PRD 364
                      L  YP    +   L         +  +L  + ++ E     AK+     D
Sbjct: 424  PMEYVVMHASLLAYPHPGMSSAELASNRSKARAMLTELHSVIQSAETDEDMAKVRHIADD 483

Query: 365  AQAFIDLGELLISSDTGAALDAFKTA-----RTLLKKAGE----EVPIEVLNNIGVIHFE 415
               F+DL ++        A+ A++TA      T++ + GE    +  +++ +N+G ++  
Sbjct: 484  TDVFLDLAKMWQKESLEKAIGAYQTAVSGRVETIVDEGGEVEVDQRAVKMSSNLGALYQL 543

Query: 416  KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 475
            +G  ++A + +++AL                                  R  N+    E 
Sbjct: 544  QGNADTAERMYQEAL---------------------------------QRLGNEAGK-EA 569

Query: 476  PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
               +  + FNL R  E+  +T  AS  YR +L ++ +++++ +RLA IA A      +  
Sbjct: 570  EEMRTILAFNLGRAYEEAGETTKASQWYRDVLRQHPEHMESKVRLACIAAAAGRNFDAHT 629

Query: 536  LVNEALK-------VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLS 588
            L+ E LK       +   Y + L  LG L        K    F + +   +  D +   +
Sbjct: 630  LLKECLKSDESNITLRSTYTHFLISLGSL--------KEALAFTSQTLKLERADVFTYCA 681

Query: 589  LGNWNYFAALRNEKRAPKL--EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK--- 643
            LG W +F   R  K   +L        ++ E Y R +    +   AA G  + LAE    
Sbjct: 682  LG-WIHFTLGREAKSTSELAERTKQYLRSAEAYERALTLDPACAMAAQGLAIALAEDTLA 740

Query: 644  -----GQFDVSKDLFTQVQEAASG-SVFVQMPD------VWINLAHVYFAQGNFALAMKM 691
                      ++++  +++ A     VF ++ D      V +N+ H +F +G    A++ 
Sbjct: 741  LKPLGAAVGTAEEMKARMRLAGQALGVFSRIADSIQEGSVHVNIGHSFFVRGEEDKAIQS 800

Query: 692  YQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSLL---RAIHLAPSNYTLRFD 744
            Y+      +   +  +LLYLAR  Y        +    K+L    RA+H+ P++  + ++
Sbjct: 801  YEAA-DNHHKGRNVPVLLYLARAWYAYANRESNFSAMSKALSFCQRAMHIQPNDRAILYN 859

Query: 745  AGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINT 802
              +  QK +     L+ ++RT +E+   + + + A   F  L  A +     +D    + 
Sbjct: 860  IAMIQQKAAEMLFGLEPSKRTLEELHVALRQAQQAANTFRAL--AEDRGALPYDPDLADQ 917

Query: 803  HVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR-KAEEQKKY------- 854
               Y   LL  A          +Q +RQ    A   A  +EARR +AEEQ +        
Sbjct: 918  RARYGDTLLRRAP---------DQLSRQESFEAEAQARVQEARRIRAEEQARIQAAEAAR 968

Query: 855  ----------LLEKRKLEDEQKRLRQQEEHFQRVKEQ 881
                      L E+R+ E E+    Q+E +  R  E+
Sbjct: 969  RAEIEAKAAELAEQRRKEREEAHAWQEEMNV-REMEE 1004


>gi|402222020|gb|EJU02087.1| hypothetical protein DACRYDRAFT_99861 [Dacryopinax sp. DJM-731 SS1]
          Length = 1088

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 205/898 (22%), Positives = 375/898 (41%), Gaps = 163/898 (18%)

Query: 53  KIETKQREKEEHFILATQYYNKAS----RIDMHEPSTWV----GKGQLLLAKGEVEQASS 104
           K+++K +EK       + Y N+A+    R+D   P   V     K    LA+  ++ A  
Sbjct: 115 KLDSKVQEK-------SVYINEAATSMVRMDSAVPKLSVVQLLSKAVSPLAENAIDAAGR 167

Query: 105 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
            F  +L+  ++N  AL+G       +GR      +++ AL+  P      R+GIGLC + 
Sbjct: 168 TFDEILQQQQNNPVALMG-------KGRI-----YFQEALKYAPDLLPDPRVGIGLCAWS 215

Query: 165 LGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEAAGIRKGMEKMQRAF------ 216
           LG   +AR+A+QR+L++ P+    + L+ L+++    N+A   R+   +  RA+      
Sbjct: 216 LGDQDRARRAWQRSLEVHPDLPAPQILICLSLL----NDAKDKRRDQRERSRAYSQGIKG 271

Query: 217 ------EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
                 +   +CA+  + L+ +F    +     +  E  +   +     S  Y  L R  
Sbjct: 272 LAALFRDKGKHCAIVADALSAYFMERKEWDKAVKAAERTIQFADLRSVVSDGYMRLGRIA 331

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
           H +GD  +A   Y  SV    K         GLGQV +   +  +A+ ++E +L    + 
Sbjct: 332 HLRGDLPQAVEQYGISVDRNEKNQ---LARTGLGQVHILTNEIPAAIHDYELLLSDNQNL 388

Query: 331 CETLKALGHI----YVQLGQIE------KAQELLRKAAKI---------DPRDAQAFIDL 371
            E L  L  +    +     +E      +A++L  +AA+I            D + ++++
Sbjct: 389 IEALLPLTSLQASAWPGASPVEQDAGKVRARQLYDRAARIIKGKEVETEGMEDPELWVEV 448

Query: 372 GELLISSDTGAALDAFKTARTLLKKAGEE---VPIEVLNNIGVI-HFEKGEFESAHQSFK 427
            +L  + D+  A DA+  A  L ++  +    V  ++LN + VI H   G  E+     +
Sbjct: 449 AKLWQAEDSNKARDAYARAVELARETADPEKGVDPKLLNALAVIRHIHGG--ETGRTEAR 506

Query: 428 DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLA 487
           D     ++   L   TK                        +G   E+   +   L+NL 
Sbjct: 507 D-----LYQEALVGATKA----------------------EEGPENEM--VQTATLYNLV 537

Query: 488 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 547
           R  E + +   A   Y+ +L ++ +YVDA  RLA + + R  +  +  L+ +AL+     
Sbjct: 538 RCWEALGEQTQAQEAYQKLLSRHPEYVDAKARLAHVYQQRGRIDEAHGLLKDALE----- 592

Query: 548 PNALSMLGDLELKNDDWVKAKETFRAASDATDGKDS-YATLSLGNW-------------N 593
               S   +L+L      +A  T+   S     + S +A L+L N+             +
Sbjct: 593 ----SQTDNLDL------RAYYTYFLPSHKQSRQSSKFAELTLSNYDKHDVYALSAVAAD 642

Query: 594 YFAALRNEK----RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 649
             +A R  +     A K+   H +   + Y +V+    +  YAA G  +++AE     ++
Sbjct: 643 LCSAARENRDTGSEAIKVRRKHFQNCAQAYDKVLSLDPNCAYAAMGLAIMIAEDALGGLA 702

Query: 650 KDLFTQVQE--------AASGSVF------VQMPDVWINLAHVYFAQGNFALAMKMYQNC 695
                 V E        A +  VF      +    V +N+ H Y+    F  A++ Y+  
Sbjct: 703 GAPVPGVDEARERERNAAEALGVFGRVRESINNGSVLVNMGHCYYTLEQFQKAIESYELA 762

Query: 696 LRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVA 748
            R +Y   D  +LL+L    Y     EQ ++  ++ L    +A+ LAP +    +D  V 
Sbjct: 763 SR-YYNGKDFAVLLHLCCAWYAKANLEQNREGMETALDYAKKALALAPEDKATVYDIAVI 821

Query: 749 MQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEY 806
            QKF+    +L   R+T + ++  + + + A  +F+ L    +  +  F     +    Y
Sbjct: 822 QQKFAELLFSLPPDRQTLENLQEAIDQAQEAQGMFAALVEDKS-PVMPFARDLPDQRRRY 880

Query: 807 CKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDE 864
            + +L  +  H EA +  EQ+   + EAAR  A+ EE R++ +     L    +LEDE
Sbjct: 881 GETVLRKSGEHVEAQKAYEQEVVAKTEAAR--AMQEEERKR-KRPSPILTRDERLEDE 935


>gi|358055991|dbj|GAA98336.1| hypothetical protein E5Q_05021 [Mixia osmundae IAM 14324]
          Length = 1296

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 194/867 (22%), Positives = 349/867 (40%), Gaps = 172/867 (19%)

Query: 133  YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
            +  SL  Y++ L + P      R+G+GLC ++LG   +A +A++R++   P    A   L
Sbjct: 380  FKQSLRLYQQILTLAPDSLPDPRIGLGLCLWQLGHSQRAVRAWKRSIAKHPGEASATAKL 439

Query: 193  AV------------MDLQANEA-----AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
             +             D  + EA        ++    +   F+    C+ A   LA  +  
Sbjct: 440  LLGLTHFNTSKQKQRDASSREAELESETTYQQSFTSIATCFKEDKICSPAAFLLAGFYQE 499

Query: 236  TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY-MASVKEINKPH 294
            +  +  + +L E A+  +      S SY  LAR++H++ +   A  +Y +AS    N+  
Sbjct: 500  SDSNRSI-KLAERAIQYSTSAAMLSESYLALARTHHAQANLRTALEFYELASQHATNQ-- 556

Query: 295  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--------LGQ 346
              +     + Q+++K  +  +AL + ++VL+I  +  E +  L  +Y           G 
Sbjct: 557  --VVSLLAMAQIRIKQNELPAALDSLQRVLKIDNNCIEAIANLAVLYTSEYFKLPASTGL 614

Query: 347  IEK------AQELLRKA-----------------------------AKIDPRDAQAFIDL 371
             EK      A+E+  K                               ++   DA  ++D+
Sbjct: 615  AEKQAVAKEAKEIYDKLLGLFAASSAAAQNALDVSASRTVLPSQRRVRLVSEDADVYVDV 674

Query: 372  GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 431
             +L I  D    L A++ +  +       +P ++ NNIG + F + + + A + F+ AL 
Sbjct: 675  AKLWIEDDAAKCLKAYRESLRVRVDLALSLPPQLHNNIGCLLFLRNQTDLAQEHFETALT 734

Query: 432  DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH---VELPWNKVTVLFNLAR 488
            + I  T +  +T T   DA   ++ F    L   +E  GN    ++L  NK         
Sbjct: 735  NAI--TQVADETATLAQDA---LITFISYNLGLVYEASGNTDLAIDLYQNK--------- 780

Query: 489  LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 548
                             +L ++ ++ +A  RLA IA  + ++Q   +L+ E  K +G   
Sbjct: 781  -----------------LLARHSEFNEAKARLAIIALQKGDVQQCTKLLKECHKTDG--- 820

Query: 549  NALSMLGDLELKNDDWVKAKET--FRAASD-------ATDGK-DSYATLSLGNWNYFAA- 597
                   DL +K        ET  F+AA D       + D + D YA  S G   +  A 
Sbjct: 821  ------SDLAIKALTTYVLVETKQFKAARDNASYTLQSADARNDVYALCSAGMLQFEHAR 874

Query: 598  -LR-NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
             LR  +K++ +  A    KA E + +V+     N +AA G  + LAE G  +VS      
Sbjct: 875  DLRPKDKKSFQERAGRFTKAAESFEKVLQIDPKNAFAAQGLAICLAE-GTLNVSAPGPDG 933

Query: 656  VQEAASG----------SVFVQM------PDVWINLAHVYFAQGNFALAMKMYQNCLRKF 699
            +  + S           ++ +++        V++NL H YFA+  F  A++ ++   ++F
Sbjct: 934  IVLSESARRARNLRDAIAILIRLRETVNEASVYVNLGHCYFAREEFEKAIEAFEAASKRF 993

Query: 700  YYNTDAQILLYLARTHYEA----EQWQDCKKSLL---RAIHLAPSNYTLRFDAGVAMQKF 752
                    LLYLAR  +        +    ++L+   +A  L P + +++F+  + +Q  
Sbjct: 994  SNERSVSTLLYLARACFHKGHRDRSFAAVSEALVAVQKAHALNPKDLSIQFNMAI-VQHR 1052

Query: 753  SASTLQKT---RRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKH 809
                L +T    RT  E+   + E + A  +F+ L       +  F        V Y   
Sbjct: 1053 GLEILAETPSEARTLSEIDGAIVEAQKAQEIFARLGRQKGEEV-PFSVDAAQQRVRYGLG 1111

Query: 810  LLDAAKIHREAAEREEQQNRQRQ---EAARQAALAEEAR-RKAEEQKKYLL-----EKRK 860
            L+          +R E+ +R RQ   E+  QA L    R R AE ++K  +     E+ +
Sbjct: 1112 LI----------KRAEEHDRTRQVEYESTEQAKLERAKRDRDAERKRKDDMVAERAERAR 1161

Query: 861  LEDEQKRLRQQEEHFQRVKEQWRSSTP 887
            L+ EQ  L +Q        +QW    P
Sbjct: 1162 LQAEQ--LAEQRRQMLEDAKQWYVPRP 1186


>gi|405118272|gb|AFR93046.1| pol II transcription elongation factor [Cryptococcus neoformans var.
            grubii H99]
          Length = 1177

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 214/904 (23%), Positives = 375/904 (41%), Gaps = 179/904 (19%)

Query: 115  DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
            +N+ AL  QA ++F R  +  +L+ Y++ L + P      R+G+GLC ++LG   KAR A
Sbjct: 178  NNLIALTAQARLQFARRSHLQALQTYQKLLALAPEMSPDPRIGLGLCFWQLGDRAKARTA 237

Query: 175  FQRALQLDPEN-VEALVALAVMDLQANEAAGIR--------KGMEKMQRAFEIYPYCAMA 225
            ++RALQ +P + V  L+        A + +  R        +G+  +Q+AF++    + +
Sbjct: 238  WERALQREPGSWVCLLLLGLASLNDARQPSVPRTERLKLETEGVGFVQKAFKLNNKSSAS 297

Query: 226  LNYLANHFFFTGQH--FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK-----GDYEK 278
               LA+     GQ    L  +L E A+    +   K H+   LA S   +     GD   
Sbjct: 298  ALALASVSGQGGQSQLPLASKLAERAV---QYADNKRHAV--LANSERGRLGFMAGDLAD 352

Query: 279  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV--------------- 323
            AG Y +A+VK+ +     +     LGQ+ +K G+ R AL   E+                
Sbjct: 353  AGTY-IAAVKKEDPNAVNMIAELTLGQMAIKSGNLREALNYIEQTAKRLNGQGPLEYTVL 411

Query: 324  ---LEIYP------DNCETLKALG-------HIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
               L  YP      D     + L        H  V   + E     LR        DA  
Sbjct: 412  HACLLAYPHPGMSHDEVVRNRTLARNMLTEVHNLVSSAETEADWAKLRGVGS----DADV 467

Query: 368  FIDLGELLISSDTGAALDAFKTARTLL--------KKAGEEVP----IEVLNNIGVIHFE 415
            F+DL +L    +   A+ A++TA +++        ++ G + P    + + +N+G ++  
Sbjct: 468  FVDLAKLWQGQNVEKAIGAYQTALSIITDNDLDSAQEPGLDPPNFTALRLSDNLGALYHL 527

Query: 416  KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 475
            +G  E+A + +++AL                      ++ + K+ ++             
Sbjct: 528  EGNVETAERMYQEAL-------------------QKIAIQEGKEAEVL------------ 556

Query: 476  PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK-------ARN 528
               K  + +NL R  E+  D   A+  YR +L ++ ++V++ +RLA IA        A  
Sbjct: 557  ---KTVLAYNLGRAYEEGGDHARAAQWYRDVLRQHPEHVESKVRLALIATSAGRHFDAHT 613

Query: 529  NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLS 588
             L+  ++     L +   Y N L  +G          +    F   +   D  D++   +
Sbjct: 614  LLKECLQSEENDLTLRSVYTNFLITIGS--------YREAFAFTTQTLKVDKADAWTFCA 665

Query: 589  LGNWNYFAALRNEKRAPKLEATHLE---KAKELYTRVIVQHTSNLYAANGAGVVL----- 640
            LG W +F  L  E ++P+  A   +   ++ E Y R ++       AA G  + L     
Sbjct: 666  LG-WLHFT-LGREAKSPQELAERPKQYLRSAEAYERALIIDPKCAMAAQGLAIALVEDSL 723

Query: 641  --------AEKGQFDV-----SKDLFTQVQEA-ASGSVFVQMPDVWINLAHVYFAQGNFA 686
                    AE+G+        +  +F +++++ A G+V V       NL H YF +G   
Sbjct: 724  ALRGTNYGAEEGKVRARLAGQTLGIFGRIKDSLAEGAVNV-------NLGHCYFIRGEEE 776

Query: 687  LAMKMYQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSL---LRAIHLAPSNY 739
             A++ Y      F    D  +LLYLAR  Y        +    K+L    +A+H+ P++ 
Sbjct: 777  KAIESYMTASNAFGAK-DVNVLLYLARAWYALANRESNFSAMNKALEYCQKAMHIHPADR 835

Query: 740  TLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDE 797
             + ++  +  QK +    +L  +RRT +E+   + + + AV  F  L+   +  L  +D 
Sbjct: 836  AILYNIAMIQQKAAEMLFSLDSSRRTLEELTIALKQAQQAVDTFRSLADDKSGPLP-YDA 894

Query: 798  KKINTHVEYCKHLLDAAK--------IHREAAEREEQQNRQRQEAARQAALAEEARR--- 846
            +  +    Y + LL  A            EA  R E+  R R E   +   AEEAR+   
Sbjct: 895  ELADQRARYGEGLLRRAAGEMSKQEAYQGEALARVEEARRLRAEEQARIQAAEEARQAEL 954

Query: 847  --KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSEN--DDDEV 902
              KAEE    + E+R+   E+    Q+E   ++ +E+ R +    KR+ R E   D  E 
Sbjct: 955  RIKAEE----IAEQRRKALEEALAWQEELAARQAEEEARRAANVEKRKRRKEGIADSGED 1010

Query: 903  GHSE 906
            G  E
Sbjct: 1011 GEGE 1014


>gi|321252636|ref|XP_003192475.1| pol II transcription elongation factor [Cryptococcus gattii WM276]
 gi|317458943|gb|ADV20688.1| Pol II transcription elongation factor, putative [Cryptococcus gattii
            WM276]
          Length = 1118

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 210/932 (22%), Positives = 381/932 (40%), Gaps = 168/932 (18%)

Query: 82   EP-STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 140
            EP S  +GK    LA G+   A    + +L+   +N+ AL  QA ++F R  +  +L+ Y
Sbjct: 154  EPVSLTMGKVIHYLATGQPGLAHPLVERLLQRQPNNLIALTAQARLQFARRSHLQALQTY 213

Query: 141  KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 200
            ++ L + P      R+G+GLC ++LG   KAR A++RAL+ +P +    + L +  L   
Sbjct: 214  QKLLALAPEMSPDPRIGLGLCFWQLGDRTKARTAWERALEREPGSWVCSLLLGLASLNDA 273

Query: 201  EAAGIRK---------GMEKMQRAFEI--YPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
                + +         G+  +Q+AF++      +       +     GQ  L  +L E A
Sbjct: 274  RQPSVPRTERLKLETEGVGFVQKAFKLNNKSSASALALASVSGQGGQGQLPLASKLAERA 333

Query: 250  LAVTNHGPTKSHSYYNLARSYHSK-----GDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
            +    +   K H+   LA S   +     GD   AG  Y+A++K+ +     I     LG
Sbjct: 334  I---QYADNKRHAI--LANSERGRLGFMAGDLADAG-TYIAAIKKEDPNAVNIIAELTLG 387

Query: 305  QVQLKLGDFRSALTNFEK------------------VLEIYP------DNCETLKALG-H 339
            Q+ +K G  R AL   E+                   L  YP      D     + L  +
Sbjct: 388  QMAIKSGSLREALNYIEQTAKRLNGQGPLEYTVLHACLLAYPHPGMSHDEVVRNRTLARN 447

Query: 340  IYVQLGQIEKAQELLRKAAKIDP--RDAQAFIDLGELLISSDTGAALDAFKTARTLL--- 394
            +  ++  +  A E     AK+     D+  F+DL +L    +   A+ A++TA +++   
Sbjct: 448  MLTEVHNLVGAAETEADWAKLRGVGSDSDVFVDLAKLWQGENVEKAIGAYQTALSIITDN 507

Query: 395  -----KKAGEEVP----IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 445
                 ++ G + P    + + +N+  ++  +G  E+A + +++AL               
Sbjct: 508  DLESAQEPGLDSPNFTALRLSDNLAALYHLEGNVETAERMYQEAL--------------- 552

Query: 446  YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
                   ++ + K+ ++                K  + +NL R  E+  D   A+  YR 
Sbjct: 553  ----QKVAIQEGKEAEIL---------------KTVLAYNLGRAYEEGGDHAKAAQWYRD 593

Query: 506  ILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK-------VNGKYPNALSMLGDLE 558
            +L ++ ++V++  RLA IA +      +  L+ E L+       +   Y N L  +G   
Sbjct: 594  VLRQHPEHVESKARLALIATSAGRHFDAHTLLKECLQSDENNLTLRSVYTNFLITIGSY- 652

Query: 559  LKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE---KA 615
               + +    +T R      D  D++   +LG W +F  L  E ++P+  A   +   ++
Sbjct: 653  --REAFAFTTQTLR-----IDKSDAWTFCALG-WLHF-TLGREGKSPQELAERPKQYLRS 703

Query: 616  KELYTRVIVQHTSNLYAANGAGVVLAEKG------QFDVSKDLFTQVQEAASGSVFVQMP 669
             E Y R ++       AA G  + L E         +   +          +  +F ++ 
Sbjct: 704  AEAYERALIIDPKCAMAAQGLAIALVEDSLALRGTNYGADEGKVRARLAGQTLGIFGRIK 763

Query: 670  D------VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY----EAE 719
            D      V +NL H YF +G    A++ Y      F    D  +LLYLAR  Y       
Sbjct: 764  DSLAEGAVNVNLGHCYFVRGEEEKAIESYMTASNAF-GGKDVNVLLYLARAWYALANRES 822

Query: 720  QWQDCKKSL---LRAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAEL 774
             +    K+L     A+H+ P++  + ++  +  QK +    +L  ++RT +E+   + + 
Sbjct: 823  NFSAMNKALDYCQEAMHIHPADRAILYNIAMIQQKAAEMLFSLDSSKRTLEELTIALKQA 882

Query: 775  ENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEA 834
            + AV  F  L+   +  L  +D +  +    Y + LL      R A E  +Q+  Q +  
Sbjct: 883  QQAVDTFRSLADDKSGPLP-YDAELADQRARYGEGLL-----RRAAGEMSKQEAYQGETL 936

Query: 835  ARQAALAEEARR-KAEEQKKY-----------------LLEKRKLEDEQKRLRQQEEHFQ 876
            AR     EEARR +AEEQ +                  + E+R+   E     Q+E   +
Sbjct: 937  AR----VEEARRLRAEEQARIRAAEEARQAELRIKAEEIAEQRRKAREDAMAWQEELAAR 992

Query: 877  RVKEQWRSSTPASKRRERSEN--DDDEVGHSE 906
            + +E+ + +    KR+ R E   D  E G  E
Sbjct: 993  QAEEEAKRAANMEKRKRRKEGIVDSGEDGEGE 1024


>gi|296808941|ref|XP_002844809.1| tetratricopeptide repeat protein 1 [Arthroderma otae CBS 113480]
 gi|238844292|gb|EEQ33954.1| tetratricopeptide repeat protein 1 [Arthroderma otae CBS 113480]
          Length = 1628

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 206/904 (22%), Positives = 355/904 (39%), Gaps = 184/904 (20%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ ++ + KE +   AT   N+ASR++   P  ++ +G L + +               
Sbjct: 569  GQLYSEAKTKEFYLQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPVRPGTV 628

Query: 99   -----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
                 VE    A K   E+ +     N+ A+LG+A   +  GRY ++LE Y+ AL   P+
Sbjct: 629  DTSERVESLQQAIKCFDESSKAFGGRNIMAILGRARANYMLGRYGEALEGYQEALVKMPN 688

Query: 150  C--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN------- 200
               P   R+GIG C ++L    +A+ A+ RAL L+P++  A + LA   L  +       
Sbjct: 689  MRDPDP-RIGIGCCLWQLDFKDQAKVAWNRALTLNPDSKAANILLAAYYLHDSSRHSTSD 747

Query: 201  -EAAGIRKG--MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
             E + + K    +  Q+AF++     M      ++F        VE L   A+ +T+   
Sbjct: 748  PEFSSLYKTAMTQYTQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNA 807

Query: 258  TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSA 316
              S  +Y LAR  H++GD E+A  YY  S +      +   P  +G  Q+ +K  DF  A
Sbjct: 808  IASDGWYLLARKEHTEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVKRKDFDGA 867

Query: 317  LTNFEKVLEIYPDNCETLKALGHIYV------------QLGQIEKAQELL---RKAAKID 361
                EK+++    N E +  LG +Y             +  + +KA  LL   R + K D
Sbjct: 868  KFRLEKIIQ-QTKNPEAMALLGSLYADEVFAASNSKEDKSAEAKKAISLLESVRTSWKAD 926

Query: 362  PR----DAQAFIDLGELLISSDTGAAL--------------------DAFKTARTLLKKA 397
             +    D    + L  L   S    ++                    D  +  + + +  
Sbjct: 927  KKKLTPDESVLLYLSRLYEVSAPEKSMQCLNQVEEMQLAQIPEDERPDDVEGEKAMTEVL 986

Query: 398  GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD--SKTKTYVIDASASML 455
             E +  ++LNNIG   ++  + E A    + AL   +     +  S T  YV        
Sbjct: 987  RERLAPQLLNNIGCFLYQADKIEQARNMLQTALNACVKAQEREDASDTDAYV-------- 1038

Query: 456  QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD 515
                                     T+ +NLAR  E       A  +Y  +L ++ DYV+
Sbjct: 1039 ------------------------TTISYNLARTYEAAGMPNEAKKVYEGLLERHSDYVE 1074

Query: 516  AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKE 569
            A  RL  IA       L     +E        P  ++ L + E  N +      W  +K 
Sbjct: 1075 ANARLTYIA-------LRQSPTDEG-------PKKMAKLYEAEATNMEVRALFGWYLSKS 1120

Query: 570  TFRAASDAT--------------DGKDSYATLSLGNWNYFAALRNEKRAPKLEATH---- 611
              R A+ A               D  D YA   +GN  Y    R+ +R  + +       
Sbjct: 1121 KRRVANLAEDLEQRHYKHTLQGYDKHDRYALTGMGNL-YLLTGRDMRRDGEQDKEKRRKI 1179

Query: 612  LEKAKELYTRVIVQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPD 670
             EKA E + + +     N YAA G  + L  ++  +  +  +F++V++    S       
Sbjct: 1180 YEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDYSTAVQIFSKVRDTLRDS------S 1233

Query: 671  VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKS 727
            V++NL HV+     F    K  +N   +     DAQIL  L R  +   + EQ     K+
Sbjct: 1234 VYLNLGHVFAELRQFT---KSIENDRAR-----DAQILACLGRVWFLKGKQEQNLSAMKT 1285

Query: 728  LL----RAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVF 781
             L    RA  +AP    L F+      +    A +L + ++T++EV   +  +  A+  F
Sbjct: 1286 ALEYAERARSVAPDQIHLEFNIAFVQNEIGLLAISLPEAQKTSEEVEEAMNGVTAAIEAF 1345

Query: 782  SHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALA 841
              ++ + N     +    + +    C++ +      R   +R  Q  ++ +E  + AA  
Sbjct: 1346 DKIANSKN---PPYPRSSLESRATMCRNTI------RNQLQRTLQSQKEYEE--KNAAKL 1394

Query: 842  EEAR 845
            ++AR
Sbjct: 1395 QQAR 1398


>gi|378730586|gb|EHY57045.1| hypothetical protein HMPREF1120_05096 [Exophiala dermatitidis
           NIH/UT8656]
          Length = 1241

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 196/902 (21%), Positives = 360/902 (39%), Gaps = 157/902 (17%)

Query: 56  TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE--------------- 100
           ++ + K+ +   AT   N A RI+   P  ++ +G L L +  ++               
Sbjct: 141 SEAKTKDHYLREATATINDALRINPAYPPLYLTRGVLYLLRASLQSSTKTGAEAERAESL 200

Query: 101 -QASSAFKIVLEA-DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLG 157
            QA   F   L A D  N+ A +G+A   +   ++S +L+ Y+  L   P       R+G
Sbjct: 201 KQALKCFDDALRASDGRNMMAAMGRARTLYLLKQFSPALQVYQEVLSKMPGHTDPDPRIG 260

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPEN--VEALVALAVMDLQANEAAG-------IRKG 208
           IG C ++LG   +A+ A++R++ L+PE+    AL+ +  +   A   A         +K 
Sbjct: 261 IGCCYWQLGFHERAKMAWERSVALNPESKVAHALLGVYYLHESAKYPASDPQFNLLYKKA 320

Query: 209 M-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
           M E  ++A+ I     ++    A++F  TG++  VE L   A+  T+     S  +Y LA
Sbjct: 321 MSEHTKKAYTIDKNFPLSCATFASYFLLTGRYDTVEPLARKAIEQTDINAIASDGWYLLA 380

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDF------------- 313
           R  H+KGD  KA  YY  S +      +  FP  +GL Q+ ++ GD              
Sbjct: 381 RKEHNKGDLAKASDYYTRSDQARGGLDKGYFPAKFGLIQIMVQSGDLQGAKFRLESLGQL 440

Query: 314 ----------------------------------RSALTNFEKVLEIYPDNCETLKALGH 339
                                             R A+T  E V   + D    ++    
Sbjct: 441 NRHVEAMTLLGCLYAEEAFSSQNTPTKEEKAASARKAITLLENVRRTWKDEKSRVRPDES 500

Query: 340 IYVQLG---QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 396
           + + L    ++E   E  +   +++    +  +D  +  +  D            T + +
Sbjct: 501 VLLYLARLYELENPVESFKCLQQVEAMQLEKILDEDKPDVGEDEA----------TYISQ 550

Query: 397 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
             E +P ++LNN+    + +  +  A ++F+ AL   + LT    K +          + 
Sbjct: 551 LRENLPPQLLNNMACFLYNQESYSLARETFQIALNACVKLT---EKQEAEKKAVEEEKIS 607

Query: 457 FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 516
            +++      +N      +     T+ +NLAR  E +  T  A  +Y  +L ++ DY DA
Sbjct: 608 SEEV------DNSDTDALV----TTISYNLARTYEALGLTAEAQKVYEGLLARHADYTDA 657

Query: 517 YLRLAAIA---KARNNLQLSIELV-------NEALKVNGKYPNALSMLGDLELKNDDWVK 566
             RLA +A     R+     I  V        E   + G Y ++     +   ++ ++  
Sbjct: 658 SARLAFLALESSPRDEGPRKIHAVYQSDYGNTEVRALMGWYHHSAKKKTNNVAEDVEYRH 717

Query: 567 AKETFRAASDATDGKDSYATLSLGNWNYFAA---LRNEKRAPKLEATHLEKAKELYTRVI 623
            K T +      D  D Y+   +GN +   A    RN  +  +  +    KA E + + +
Sbjct: 718 YKHTLQ----GYDKHDLYSLTGMGNVHLAIARDMPRNTDQEKEKRSKMYAKAYEFFDKAL 773

Query: 624 VQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 682
                N YAA G  + L  +K  +  +  +FT+V++       ++   V +NL H+    
Sbjct: 774 QLDPKNAYAAQGVAIALCDDKKAYSDALQIFTKVKDT------LRDASVNVNLGHILTEL 827

Query: 683 GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLA 735
             +  A+  Y   +RK     +AQ+L  L+R      +A++      + L    RA+   
Sbjct: 828 RQYQRAIDNYDLAMRKEGKAENAQLLACLSRAWLLKGKADRSIPALNTALDYMKRALATQ 887

Query: 736 PSNYTLRFDAGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 791
             +  L+F+  VA  +F      +  ++T RT ++V + +A LE A+  F  ++      
Sbjct: 888 SDSPHLQFN--VAFIQFQIAQHVNQAKETDRTLEDVDAAIAGLEAAIETFEQVAR----- 940

Query: 792 LHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQ 851
                    +    Y +  L+     R A  +   +N+  ++ ARQAA   E   K EE 
Sbjct: 941 ---------HKQPPYPRTALE----QRAAMGKNTMRNQLERQRARQAAYESENAAKLEEA 987

Query: 852 KK 853
           K+
Sbjct: 988 KQ 989


>gi|240277292|gb|EER40801.1| tetratricopeptide repeat domain-containing protein [Ajellomyces
            capsulatus H143]
          Length = 1244

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 245/1082 (22%), Positives = 419/1082 (38%), Gaps = 238/1082 (21%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
            Y KQ +++    IL  G    +      V  E++ +L  +   Y             G++
Sbjct: 77   YAKQNQIDHAIDILNRG----LSSLAQGVTKEKLGLLGWICWLYMRKSREAPRVAPEGQL 132

Query: 55   ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE---------------- 98
             ++ + K+ +   AT   N+ASR++   PS ++ +G L + +                  
Sbjct: 133  VSEAKTKDYYLQAATSTLNEASRLNPAYPSLFLARGVLSILRASLQPPAKALRPGTVDTS 192

Query: 99   --VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC-- 150
              VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+   
Sbjct: 193  ERVETLRQALKCFDESAKSFGNRNVMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRD 252

Query: 151  PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG 204
            P   R+GIG C ++L    +A+ A+ RAL L+PE+  A + L    L        N+ A 
Sbjct: 253  PDP-RIGIGCCLWQLDFKEQAKAAWTRALALNPESKVANILLGAYYLYDSSRHATNDPAF 311

Query: 205  ---IRKGMEK-MQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNH 255
                +  M +  Q+AF++   YP  C+M   Y     F   +HF  VE L   A+ +T+ 
Sbjct: 312  GSLYKIAMTQYTQKAFKVDKEYPMTCSMFGGY-----FLLRKHFPTVEALARKAIELTDV 366

Query: 256  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFR 314
                S  +Y LAR  H +G+  +A  YY  S +          P  +G  Q+Q++ GD+ 
Sbjct: 367  NAIASDGWYLLARKEHFEGNSARANEYYSRSDQARGGGDSGYLPAKFGAVQMQVRTGDYD 426

Query: 315  SALTNFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRKA--- 357
             A    EK+++    N E++  LG ++ +                +++KA  LL      
Sbjct: 427  GAKFRLEKIIQ-QTKNPESMTLLGALFAEEVFAAQSSPLKEDKSAEVKKATSLLESVRAS 485

Query: 358  -----AKIDPRDAQAFIDLGELLISSDTGAALDAFK-----------------------T 389
                  K+ P D    + L  L  S     ++   +                       T
Sbjct: 486  WKDEKKKLSP-DESVLLYLARLYESGSPEKSMQCLQHVEQMQLAQIPDTERPEDIEDEET 544

Query: 390  ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 449
               LL+   E +  ++LNN+G   +   + E A   F+ AL        + S+ +    D
Sbjct: 545  TTNLLR---EHLAPQLLNNMGCFLYHSEKIELARNMFQTALN-----ACVKSRDRDDSAD 596

Query: 450  ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 509
              A +                          T+ +NLAR  E       A  +Y  +L +
Sbjct: 597  TDALV-------------------------TTISYNLARTYEAASMPEEAKKVYEGLLER 631

Query: 510  YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------ 563
            + DY +A  RL  IA       L     +E        P  ++ L +LE  N +      
Sbjct: 632  HSDYTEANARLTYIA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRALFG 677

Query: 564  WVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEA 609
            W  +K   R A+ A D +              D Y+   +GN  Y  A R+ KR  + + 
Sbjct: 678  WYLSKSKRRVANIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMKRDTEQDR 736

Query: 610  TH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 665
                   EKA E + + +     N YAA G  + L      D  KD  T VQ      +F
Sbjct: 737  EKRRKMYEKAVEFFDKALQLDPKNAYAAQGIAIAL-----VDDRKDYTTAVQ------IF 785

Query: 666  VQMPD------VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAE 719
             ++ D      V++NL HVY     F+ +++ Y+  L K     D QIL  L R      
Sbjct: 786  SRIRDTLRDASVYLNLGHVYAELRQFSKSIENYEAALSKDR-QRDTQILACLGRVWLLKG 844

Query: 720  QWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEV 767
              +          DC +   RA  +AP    L F+      + +    +L +T+++  +V
Sbjct: 845  MQEMNLAAMNTALDCTQ---RARAIAPEQIHLEFNVAFVQNQIAQLVVSLPETQKSLQDV 901

Query: 768  RSTVAELENAVRVFSHLSAASNL-HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQ 826
            +     L+ A+  FS ++ A +  +  G  E++ N      +  L+  +  +   E EE+
Sbjct: 902  QIASDGLDEAINTFSQIAKAKHPPYPRGSLEQRANMGKNTIRRKLE--RTLQSQGEYEEK 959

Query: 827  QNRQRQEAARQAALAEEARRKAE--------EQKKYLLEKR-KLEDEQKRLRQQEEHFQR 877
               + Q+A          R + +        E+K+ + E R +L +E +RL       +R
Sbjct: 960  NATKLQQAREARETELRRREEEKRKVEEAELERKRQIAEDRQRLIEEAQRLAAIRAEEER 1019

Query: 878  VKEQWRSSTPA--------------SKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSR 923
             +E+   +T +              SKR++    DD      + + R  G   + +  + 
Sbjct: 1020 AREEAEYTTDSETGDKVKRKKKAAASKRKKTDAGDDSGAAGRKSKDRSTGPESELESDAE 1079

Query: 924  SH 925
             H
Sbjct: 1080 DH 1081


>gi|225562205|gb|EEH10485.1| tetratricopeptide repeat domain-containing protein [Ajellomyces
            capsulatus G186AR]
          Length = 1244

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 244/1082 (22%), Positives = 420/1082 (38%), Gaps = 238/1082 (21%)

Query: 5    YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
            Y KQ +++    IL  G    +      V  E++ +L  +   Y             G++
Sbjct: 77   YAKQNQIDHAIDILNRG----LSSLAQGVTKEKLGLLGWICWLYMRKSREAPRVAPGGQL 132

Query: 55   ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE---------------- 98
             ++ + K+ +   AT   N+ASR++   PS ++ +G L + +                  
Sbjct: 133  VSEAKTKDYYLQAATSTLNEASRLNPAYPSLFLARGVLSILRASLQPPAKALRPGTVDTS 192

Query: 99   --VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC-- 150
              VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+   
Sbjct: 193  ERVETLRQALKCFDESAKSFGNRNVMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRD 252

Query: 151  PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG 204
            P   R+GIG C ++L    +A+ A+ RAL L+PE+  A + L    L        N+ A 
Sbjct: 253  PDP-RIGIGCCLWQLDFKEQAKAAWTRALALNPESKVANILLGAYYLYDSSRHATNDPAF 311

Query: 205  ---IRKGMEK-MQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNH 255
                +  M +  Q+AF++   YP  C+M   Y     F   +HF  VE L   A+ +T+ 
Sbjct: 312  GSLYKIAMTQYTQKAFKVDKEYPMTCSMFGGY-----FLLRKHFPTVEALARKAIELTDV 366

Query: 256  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFR 314
                S  +Y LAR  H +G+  +A  YY  S +          P  +G  Q+Q++ GD+ 
Sbjct: 367  NAIASDGWYLLARKEHFEGNSARANEYYSRSDQARGGGDRGYLPAKFGAVQMQVRTGDYD 426

Query: 315  SALTNFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRKA--- 357
             A    EK+++    N E++  LG ++ +                +++KA  LL      
Sbjct: 427  GAKFRLEKIIQ-QTKNPESMTLLGALFAEEVFAAQSSPLKEDKSAEVKKATSLLESVRAS 485

Query: 358  -----AKIDPRDAQAFIDLGELLISSDTGAALDAFK-----------------------T 389
                  K+ P D    + L  L  S     ++   +                       T
Sbjct: 486  WKDEKKKLSP-DESVLLYLARLYESGSPEKSMQCLQHVEQMQLAQIPDTERPEDIEDEET 544

Query: 390  ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 449
               LL+   E +  ++LNN+G   +   + E A   F+ AL        + S+ +    D
Sbjct: 545  TTNLLR---EHLAPQLLNNMGCFLYHSEKIELARNMFQTALN-----ACVKSRDRDDSAD 596

Query: 450  ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 509
              A +                          T+ +NLAR  E       A  +Y  +L +
Sbjct: 597  TDALV-------------------------TTISYNLARTYEAASMPEEAKKVYEGLLER 631

Query: 510  YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------ 563
            + DY +A  RL  IA       L     +E        P  ++ L +LE  N +      
Sbjct: 632  HSDYTEANARLTYIA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRALFG 677

Query: 564  WVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEA 609
            W  +K   R A+ A D +              D Y+   +GN  Y  A R+ +R  + + 
Sbjct: 678  WYLSKSKRRVANIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTEQDR 736

Query: 610  TH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 665
                   EKA E + + +     N YAA G  + L      D  KD  T VQ      +F
Sbjct: 737  EKRRKMYEKAVEFFDKALQLDPKNAYAAQGIAIAL-----VDDRKDYTTAVQ------IF 785

Query: 666  VQMPD------VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAE 719
             ++ D      V++NL HVY     F+ +++ Y+  L K     D QIL  L R      
Sbjct: 786  SRIRDTLRDASVYLNLGHVYAELRQFSKSIENYEAALSKDR-QRDTQILACLGRVWLLKG 844

Query: 720  QWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEV 767
              +          DC +   RA  +AP    L F+      + +    +L +T+++  +V
Sbjct: 845  MQEMNLVAMNTALDCTQ---RARAIAPEQIHLEFNVAFVQNQIAQLVVSLPETQKSLQDV 901

Query: 768  RSTVAELENAVRVFSHLSAASNL-HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQ 826
            +     L+ A+  FS ++ A +  +  G  E++ N      +  L+  +  +   E EE+
Sbjct: 902  QIASDGLDEAINTFSQIAKAKHPPYPRGSLEQRANMGKNTIRRKLE--RTLQSQGEYEEK 959

Query: 827  QNRQRQEAARQAALAEEARRKAE--------EQKKYLLEKR-KLEDEQKRLRQQEEHFQR 877
               + Q+A          R + +        E+K+ + E R +L +E +RL       +R
Sbjct: 960  NATKLQQAREARETELRRREEEKRKVEEAELERKRQIAEDRQRLIEEAQRLAAIRAEEER 1019

Query: 878  VKEQWRSSTPA--------------SKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSR 923
             +E+   +T +              SKR+++   DD      + + R  G   + +  + 
Sbjct: 1020 AREEAEYTTDSETGDKVKRKKKAAASKRKKKDAGDDSGAAGRKSKDRSTGPESELESDAE 1079

Query: 924  SH 925
             H
Sbjct: 1080 DH 1081


>gi|115438446|ref|XP_001218068.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114188883|gb|EAU30583.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1635

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 247/1094 (22%), Positives = 434/1094 (39%), Gaps = 212/1094 (19%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------- 98
            G++ T+ + K+ +  LAT   N+ASR++   P  ++ +G L L +               
Sbjct: 593  GELYTESKTKDYYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVD 652

Query: 99   ----VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
                VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   P  
Sbjct: 653  TSERVESLRQALKCFDESSKAFGGRNVMAILGRARTQYMLGRYAEALEGYQKVLMRMPGL 712

Query: 151  PGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEA 202
                 R+GIG C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A
Sbjct: 713  TDPDPRIGIGCCLWQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPA 772

Query: 203  AGIRKGM---EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
             G    M   +  Q+AF++     M       +F     +  VE L   ++  T+     
Sbjct: 773  FGSLYKMAMTQYTQKAFKLDKEYPMTCALFGGYFLLRKSYSTVETLARKSIENTDVMQIA 832

Query: 260  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALT 318
            S  +Y L R  H +GD  +A  +Y  S +      +   P  +G  Q+Q+   D   A  
Sbjct: 833  SDGWYLLGRKAHYEGDLPRAAEFYNRSDQARGGGDKGYLPAKFGAVQMQVSNKDLDGAKF 892

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRK-------- 356
              EK+++    N E +  LG ++ +                +I+KA  L           
Sbjct: 893  RLEKIIQ-QTKNAECMILLGALHAEEVFAAQKSGSKEDKSAEIKKAISLFESVRALWKDD 951

Query: 357  AAKIDP------------------RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 398
              KI P                  +  Q  + L E+ ++                +K A 
Sbjct: 952  GKKISPDESVLVYLARLYEQTAPEKSMQCLVQLEEMQLAEIAADEYPEGIEDEEQIKDAM 1011

Query: 399  E-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
               +P ++LNN+G   ++  + + A   F+ AL        + SK K   +D  A +   
Sbjct: 1012 RVNLPPQLLNNMGCFMYQNEKMDLARSLFQTALK-----ACVRSKEKESDLDTDALV--- 1063

Query: 458  KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
                                   T+ +NL R  E       A  +Y  +L ++ DY +A 
Sbjct: 1064 ----------------------TTISYNLGRSYEASDMPDEAKKVYEGLLERHSDYTEAN 1101

Query: 518  LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAASD 576
             RL  IA       L     +E  K   K   A S   +LE++    W  +K   RAA+ 
Sbjct: 1102 ARLTYIA-------LRQSPTDEGPKRMAKLYEADST--NLEVRALFGWYLSKSKKRAANL 1152

Query: 577  ATDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELY 619
            A D +              D Y+   +GN +   A  +R +    K +   + E+A E +
Sbjct: 1153 AEDHEQRHFKHTLQYYDKHDRYSLTGMGNVHLMTARDMRRDTDQDKEKRRKMYERAVEFF 1212

Query: 620  TRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHV 678
             + +     N YAA G  + L + K     +  +F+++++       ++   V++NL HV
Sbjct: 1213 DKALQLDPRNAYAAQGIAIALVDDKKDHGTAVHIFSKIRDT------LRDASVYLNLGHV 1266

Query: 679  YFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RA 731
            Y     +  +++ Y+  L K     DAQIL  L R      + E      K+ L    RA
Sbjct: 1267 YAELRQYTRSIEHYETALSKDRAR-DAQILSCLGRVWLLKGKQEMSLSAMKTALDYAQRA 1325

Query: 732  IHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 789
              +AP+   L F+      + +  A +L +T++T  +V+     L  AV  F  L+ A N
Sbjct: 1326 HSVAPAQIHLEFNVAFVQNQIASLAYSLPETQKTVQDVQEAADGLRQAVETFGRLAQAKN 1385

Query: 790  L-HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL-------- 840
              +  G  E++ N      K L  A +  +E  E+   + +Q +EA              
Sbjct: 1386 PPYPAGALEQRANMGKTIIKQLERALQSQKEYEEKNAAKLQQAREAREAEMRRREEEVRK 1445

Query: 841  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKE------------QWRSSTPA 888
            A+EA R  E ++K   E++++ +E +RL  Q    +R +E            + + S   
Sbjct: 1446 AQEAER--ERKQKIAEERQQMIEEAQRLAAQRAEEERAREEAEMTTEEETGAKVKRSKKK 1503

Query: 889  SKRRERSENDDDEVGHSEKRRRKGG------------KRRKKDKSSRSHYETEYAEADMM 936
            S +R++   +DD +   E   R  G            KRR+ ++ S S  +++Y  ++M+
Sbjct: 1504 SSKRKKKRAEDDFISDGETPARDEGSEAESGREAAPKKRRRLERRSGSKAQSKYKSSEMV 1563

Query: 937  DYREEPEDEDASMNYREPIGQMNDQDDDVEENANDR------------------------ 972
               +E EDE  +     P    +D D +++++  +                         
Sbjct: 1564 VDSDEEEDEAVAT----PAAAESDHDQEMQQDEEEEEVVQRRRNKVNRRVADEEEDEDDL 1619

Query: 973  LAAAGLEDSDVDDE 986
                G +D+ ++DE
Sbjct: 1620 FGDGGEKDTAMEDE 1633


>gi|340508325|gb|EGR34050.1| hypothetical protein IMG5_025760 [Ichthyophthirius multifiliis]
          Length = 355

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 161/323 (49%), Gaps = 33/323 (10%)

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           L+ +A + F +  Y  SL+F+K ALQ +P  PG  RLG+G C Y L +   +++AFQR L
Sbjct: 23  LIKKAQLYFYQKNYEQSLKFFKEALQKNPRLPGRARLGLGYCFYMLKKYELSKRAFQRVL 82

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           QLD +  E+ + LA++  +  +  G +   + + +AF+I P   + L Y+A  ++     
Sbjct: 83  QLDSQVFESHLGLAILAYKRKDYQGYQ---DHLNKAFQINPNNPLVLYYIAEFYYLQQDS 139

Query: 240 FLVEQLTETALAVTNHGP--------TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
             V+++   A+   N  P        TK        R+Y       K+ LY+M     ++
Sbjct: 140 DSVQKIAIQAIQNLNMLPKIINEQEKTKVGK-----RAYRFDFFDLKSRLYFMIG-NTLH 193

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--LGQIEK 349
           K  ++        Q   +L + RS     +K L +     ET K L ++  +  LGQ + 
Sbjct: 194 KEQQY-------DQAFKRLEEIRSQCFENDKELIL-----ETYKHLAYLQSKCALGQTKL 241

Query: 350 AQ--ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN 407
           +Q  E  +KA + +P+D ++ ++    L  +D   +L  F+ A  +LK+ GE++  E+ N
Sbjct: 242 SQQYEYYKKALQYNPKDTESMLECANHLTDTDQRESLKYFENALEILKEKGEKILPELYN 301

Query: 408 NIGVIHFEKGEFESAHQSFKDAL 430
           NIGV+     +FE A ++F  AL
Sbjct: 302 NIGVLRLSLNQFEGAKEAFGKAL 324


>gi|255717528|ref|XP_002555045.1| KLTH0F19734p [Lachancea thermotolerans]
 gi|238936428|emb|CAR24608.1| KLTH0F19734p [Lachancea thermotolerans CBS 6340]
          Length = 1081

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 187/838 (22%), Positives = 345/838 (41%), Gaps = 129/838 (15%)

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
           + NV  LL +A + + +  Y+ SL  ++  L ++P      R+GIG+C ++L     A +
Sbjct: 180 KPNVMFLLVRAKLFYQKRNYNVSLRLFQELLVLNPVLQPDPRIGIGMCFWQLKDYKMAIR 239

Query: 174 AFQRALQLDPEN--VEALVAL-----AVMDLQANEA--AGIRKGMEKMQRAFEIYPYCAM 224
           +++R+L+L+P N  ++ L+ L     A  D + +E+        ++++   F       +
Sbjct: 240 SWKRSLELNPSNANIKILILLGEFHKAFTDSEDDESFRNNYMNALQQLDGIFATNKQNPV 299

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK---SHSYYNLARSYHSKGDYEKAGL 281
            L     + +  G    V  + E  +     G +    S S +   R+Y+S  +  +A  
Sbjct: 300 LLVLYETYCYLKGDFSKVIDIHEKKIIPLTPGVSNTVLSESSFWCGRAYYSLREPRRAFQ 359

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
           ++  S+K      E +   +GLGQ Q++      ++  FE +   + +  E    LG +Y
Sbjct: 360 HFQDSLK---ANEENLLARFGLGQTQIQNKLVEESILTFENLYATHENIQELNYILGLLY 416

Query: 342 V----------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 385
                            +   +EKA   + K  K+        + L    + S+     +
Sbjct: 417 SGKCLDAKSRQSIPPNGRAKLLEKAITYMEKYVKLTKAKKNQLVVLKAYTVLSELYHLQN 476

Query: 386 AFKTARTLLKKAGEE--------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 437
           ++K +   L +  E+        VP+E+ NN+G  HF  G++E A   F+ +        
Sbjct: 477 SYKQSLECLSRVVEQLSMAGNKIVPLEIYNNLGCFHFINGDWEEARSCFEKSS------K 530

Query: 438 LLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 497
           +LDS       D+SA                           +T+ FN  R+ E   D+ 
Sbjct: 531 VLDS-------DSSAP------------------------TAITIQFNKTRVSES-DDSE 558

Query: 498 AASVLYRLILFKYQDYVDA-----YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 552
            A   Y  IL  + DYV A     YL+  +   A    Q+   L   +  ++ +   +  
Sbjct: 559 NAEHGYEAILNAHPDYVHARIRCLYLKFMSTKSAELAPQMDKLLQQHSSDLDVRSFYSWF 618

Query: 553 MLGDLELKNDDWVKAKETFRAASDAT--DGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 610
           +        +D  +  ET       T  D  DSYA +SL N  Y    R  KR+   +  
Sbjct: 619 LKSHATTNANDKSENLETSHNRETLTKYDSHDSYALISLANL-YVTIGRETKRSSSAKEQ 677

Query: 611 H-----LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 665
                   KA +L+ +V+     N++AA G  ++ AE  ++  + ++  +V+++      
Sbjct: 678 EKSRQSFVKAVQLFQKVLQVDAYNVFAAQGLAIIFAENKRYGPALEILRKVRDSLDNE-- 735

Query: 666 VQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILL-YLARTHYE---AEQW 721
                V INL H       +A A++ Y+  L+KF       +LL  L R  Y     E+ 
Sbjct: 736 ----SVHINLGHCLLEMQEYAKAIENYEIALKKFTNEESRPLLLNLLGRAWYSRGIRERS 791

Query: 722 QDC--------KKSLLRAIHLAPSNYTLRFDAGVAMQKFS-ASTLQKT---RRTADEVRS 769
            +C        +++L        S         VA+  F  A TL+++    RT D++ +
Sbjct: 792 LECFEKSLDYAQQALTAETEKKNSKMVQSVKFNVALLHFQIAETLRRSVPKLRTVDKLEA 851

Query: 770 TVAELENAVRVFSHL--SAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQ 827
             A LE A+ +   L    A+ + +   D++     V+  +  + +A + R  AE+ E +
Sbjct: 852 ARAGLETALGLLKELMDQKATIMPIEELDQR-----VQLGETTMKSA-LERCIAEQTEYE 905

Query: 828 NRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR--QQEEHFQRVKEQWR 883
            +  ++ A    L EE   K +EQ+K L       +EQ+R+R  QQ + F +++E+ R
Sbjct: 906 EKVSEKLALARKLQEENELKEQEQRKKL-------EEQERVRRAQQTQEFSKLQEEAR 956


>gi|301792893|ref|XP_002931413.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog, partial
           [Ailuropoda melanoleuca]
          Length = 168

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 100/168 (59%), Gaps = 6/168 (3%)

Query: 259 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
           ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A  
Sbjct: 2   QAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKENASQ 59

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELL 375
            FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L ++L
Sbjct: 60  CFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQIL 119

Query: 376 ISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
             +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A
Sbjct: 120 EQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEA 167


>gi|374110315|gb|AEY99220.1| FAGR398Wp [Ashbya gossypii FDAG1]
          Length = 1057

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 189/817 (23%), Positives = 326/817 (39%), Gaps = 156/817 (19%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-AD------ 113
           +E+H + A Q    A   D   PS WVG    +LA  ++      +   LE AD      
Sbjct: 112 REQHLMQAEQNLKNAIEFD---PS-WVGN---MLATVDLYYQRDLYDKALETADIFIKKT 164

Query: 114 -----------RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 162
                      R NV  LL +A + + +  Y+ +L  ++  L + P+     R+GIG+C 
Sbjct: 165 QDDERRQGKVVRSNVLFLLMRAKLLYQKKNYAAALRLFQELLVLDPTLQPDPRIGIGMCF 224

Query: 163 YKLGQLGKARQAFQRALQLDPENVEA--LVAL-----AVMDLQANE--AAGIRKGMEKMQ 213
           ++L     A +A++RALQ++  N  A  LV L     A+ D + +E  A      ++ + 
Sbjct: 225 WQLRDTYMAVKAWERALQMNKNNRAASILVMLGKFRSALTDSENDERFAEQFTDVLKDLN 284

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-----PTKSHSYYNLAR 268
             +       + L  L  + +  G +   E++      ++N G        S S +   R
Sbjct: 285 NLYLDDKENPVLLALLQTYCYLVGDY---EKVISLYQEISNWGYLVGTSVLSESAFWCGR 341

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
           +Y+++ DY KA   +  +++   K  + +   +GLGQ Q++      ++  FE + +   
Sbjct: 342 AYYARQDYRKAFSLFQEALR---KNEDNLLAKFGLGQTQIQNNLVEESILTFENIYKTQE 398

Query: 329 DNCETLKALGHIYV---------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
              E    LG +Y                +   +EK+   L K  K+        + L  
Sbjct: 399 GIQELNYILGLLYSAKCFDDGFSKLAAKEKASLVEKSISFLEKYIKLTTVKKNQLVALKA 458

Query: 374 LLISSDTGAALDAFKTARTLLKKA--------GEEVPIEVLNNIGVIHFEKGEFESAHQS 425
            L+ S+       +K +   L KA         E +P+E+ NN+G  HF  G+   A + 
Sbjct: 459 YLVLSELYELQTRYKDSLECLTKAVDQWNAANTERIPVEISNNLGCFHFINGDIGLAKKY 518

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
           F+DA  D I +T  D+KT                                     TV +N
Sbjct: 519 FQDA-SDSI-VTAEDAKTIG----------------------------------TTVKYN 542

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
           +AR +E   +   +  +Y+ IL  +  YV A +R   +   +    L  E +++ LK N 
Sbjct: 543 IARTVES-EEPETSETMYQEILSAHAGYVQARIRTIFLKYMKTKTDLYAEELDQLLKQNE 601

Query: 546 KYPNALSMLGDLEL--------------KNDDWVKAKET--FRAASDATDGKDSYATLSL 589
                     DLE+              K D   + KE    R      D  D YA +SL
Sbjct: 602 ---------SDLEVRSFYSWYIKNVAVEKTDSKGENKEIKHNRETLTKYDSHDLYALISL 652

Query: 590 GNWNYFAALRNEKRA-PKLEATHLE---KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ 645
            N     A   +K A PK +    +   KA +L+ +V+     N++AA G  ++ AE  +
Sbjct: 653 ANMYVSIAKETKKSANPKEQDKSRQSFLKAVQLFQKVLQIDPLNIFAAQGLAIIFAESKR 712

Query: 646 FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 705
           F  S D+  +V+++          DV +NLAH      +F  A++ Y+  + +F    + 
Sbjct: 713 FGQSLDILRKVRDSLDNE------DVHMNLAHCLLEMKDFVKAIENYEITITRFENIENK 766

Query: 706 QILLYLARTHYEA----EQWQDC--------KKSLLRAIHLAPSNYTLRFDAGVAMQKFS 753
             LL L    + +    E+  DC        K++L        S  T  F   VA  +F 
Sbjct: 767 STLLNLLGFAWYSRGLKEKSLDCFLKALQYTKEALALEQEKPESRLTSGFMFNVAFVEFQ 826

Query: 754 ASTL----QKTRRTADEVRSTVAELENAVRVFSHLSA 786
            + +    Q   RT  ++ ++V+ L+ AV +   L++
Sbjct: 827 VAEVLRRSQPKERTLAQLEASVSGLQEAVSLLKQLAS 863


>gi|45201494|ref|NP_987064.1| AGR398Wp [Ashbya gossypii ATCC 10895]
 gi|44986428|gb|AAS54888.1| AGR398Wp [Ashbya gossypii ATCC 10895]
          Length = 1057

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 189/817 (23%), Positives = 326/817 (39%), Gaps = 156/817 (19%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-AD------ 113
           +E+H + A Q    A   D   PS WVG    +LA  ++      +   LE AD      
Sbjct: 112 REQHLMQAEQNLKNAIEFD---PS-WVGN---MLATVDLYYQRDLYDKALETADIFIKKT 164

Query: 114 -----------RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 162
                      R NV  LL +A + + +  Y+ +L  ++  L + P+     R+GIG+C 
Sbjct: 165 QDDERRQGKVVRSNVLFLLMRAKLLYQKKNYAAALRLFQELLVLDPTLQPDPRIGIGMCF 224

Query: 163 YKLGQLGKARQAFQRALQLDPENVEA--LVAL-----AVMDLQANE--AAGIRKGMEKMQ 213
           ++L     A +A++RALQ++  N  A  LV L     A+ D + +E  A      ++ + 
Sbjct: 225 WQLRDTYMAVKAWERALQMNKNNRAASILVMLGKFRSALTDSENDERFAEQFTDVLKDLN 284

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-----PTKSHSYYNLAR 268
             +       + L  L  + +  G +   E++      ++N G        S S +   R
Sbjct: 285 NLYLDDKENPVLLALLQTYCYLVGDY---EKVISLYQEISNWGYLVGTSVLSESAFWCGR 341

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
           +Y+++ DY KA   +  +++   K  + +   +GLGQ Q++      ++  FE + +   
Sbjct: 342 AYYARQDYRKAFSLFQEALR---KNEDNLLAKFGLGQTQIQNNLVEESILTFENIYKTQE 398

Query: 329 DNCETLKALGHIYV---------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
              E    LG +Y                +   +EK+   L K  K+        + L  
Sbjct: 399 GIQELNYILGLLYSAKCFDDGFSKLAAKEKASLVEKSISFLEKYIKLTTVKKNQLVALKA 458

Query: 374 LLISSDTGAALDAFKTARTLLKKA--------GEEVPIEVLNNIGVIHFEKGEFESAHQS 425
            L+ S+       +K +   L KA         E +P+E+ NN+G  HF  G+   A + 
Sbjct: 459 YLVLSELYELQTRYKDSLECLTKAVDQWNAANTERIPVEISNNLGCFHFINGDIGLAKKY 518

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
           F+DA  D I +T  D+KT                                     TV +N
Sbjct: 519 FQDA-SDSI-VTAEDAKTIG----------------------------------TTVKYN 542

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
           +AR +E   +   +  +Y+ IL  +  YV A +R   +   +    L  E +++ LK N 
Sbjct: 543 IARAVES-EEPETSETMYQEILSAHAGYVQARIRTIFLKYMKTKTDLYAEELDQLLKQNE 601

Query: 546 KYPNALSMLGDLEL--------------KNDDWVKAKET--FRAASDATDGKDSYATLSL 589
                     DLE+              K D   + KE    R      D  D YA +SL
Sbjct: 602 ---------SDLEVRSFYSWYIKNVAVEKTDSKGENKEIKHNRETLTKYDSHDLYALISL 652

Query: 590 GNWNYFAALRNEKRA-PKLEATHLE---KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ 645
            N     A   +K A PK +    +   KA +L+ +V+     N++AA G  ++ AE  +
Sbjct: 653 ANMYVSIAKETKKSANPKEQDKSRQSFLKAVQLFQKVLQIDPLNIFAAQGLAIIFAESKR 712

Query: 646 FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 705
           F  S D+  +V+++          DV +NLAH      +F  A++ Y+  + +F    + 
Sbjct: 713 FGQSLDILRKVRDSLDNE------DVHMNLAHCLLEMKDFVKAIENYEITITRFENIENK 766

Query: 706 QILLYLARTHYEA----EQWQDC--------KKSLLRAIHLAPSNYTLRFDAGVAMQKFS 753
             LL L    + +    E+  DC        K++L        S  T  F   VA  +F 
Sbjct: 767 STLLNLLGFAWYSRGLKEKSLDCFLKALQYTKEALALEQEKPESRLTSGFMFNVAFVEFQ 826

Query: 754 ASTL----QKTRRTADEVRSTVAELENAVRVFSHLSA 786
            + +    Q   RT  ++ ++V+ L+ AV +   L++
Sbjct: 827 VAEVLRRSQPKERTLAQLEASVSGLQEAVSLLKQLAS 863


>gi|50285201|ref|XP_445029.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524332|emb|CAG57929.1| unnamed protein product [Candida glabrata]
          Length = 1110

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 207/872 (23%), Positives = 347/872 (39%), Gaps = 175/872 (20%)

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
           + N   +L +A + + +  Y  SL+ ++  L ++P      R+GIG+C ++L     A Q
Sbjct: 179 KPNAMFILLRAKLMYQKKNYVASLKLFQELLVINPVLKPDPRIGIGMCFWQLKDYKLAIQ 238

Query: 174 AFQRALQLDPENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAF----EIYPY---CAM 224
           A++RALQLDP N +A  LV L        EA       EK   A      +Y       +
Sbjct: 239 AWERALQLDPNNKQASILVLLGKFHNSLTEAENDEDFKEKYAAALADLNTVYTNSKESPV 298

Query: 225 ALNYLANHFFFTGQHFLVEQLTE---TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
            L  L   FFF G +  V  + +   + L+        S S +   R+ ++ GDY KA  
Sbjct: 299 LLVLLQTFFFFKGDYEKVITIHDQKISKLSFLAPESVYSESLFWCGRASYAMGDYRKAFT 358

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
            +  S+K   +    +    GLGQ Q+K      ++  FE + +   +  E    LG +Y
Sbjct: 359 MFQESLK---RDENNLLARLGLGQTQIKNSLVEESILTFESLYKANENVQELNYILGMLY 415

Query: 342 VQ-------------------------LGQIEKAQELLRKAAKID---------PRDAQA 367
                                      +  I KA   L +  K+          PR    
Sbjct: 416 TAKCIADPAKNNDSTGNKQKNLTGAELVKMIGKALHFLDRYIKLTAAKKNQMTVPRVHLV 475

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEE--VPIEVLNNIGVIHFEKGEFESAHQS 425
              L EL   S    AL++ + A   +K    E  VP+EVLNN+  ++F  G++E A + 
Sbjct: 476 MSQLYEL--QSQYHLALESLEKAIENIKFFDGENGVPLEVLNNLSCLYFITGDYEKAQK- 532

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASM-LQFKDMQLFHRFENDGNHVELPWNKVTVLF 484
                    +L L D +      D +  + L + D ++     +D N         T L 
Sbjct: 533 ---------YLALADGRLSQSSNDGAEKLVLNYNDARILE--ASDAN---------TALT 572

Query: 485 NLARLLEQIHDTVAASV--LYRLILFKYQDYVDAYLRLA-----AIAKARNNLQLSI--- 534
               +L +    VAA V  LY  +     D  D Y RL+      +   ++NL++     
Sbjct: 573 RYGSILGKHPGHVAAKVRELYLTLEKTGVDNSDEYKRLSEEVENLVESEKDNLEVRAFYS 632

Query: 535 ------ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLS 588
                 EL   A+  N    +A +         D  VK            D  D YA +S
Sbjct: 633 WFLKRSELTGRAVAENNAKESAFN--------RDTLVK-----------YDSHDKYALIS 673

Query: 589 LGNWNYFAA--LRNEKRAPKLEAT--HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 644
           L N     A   R+ K +   E +     KA +LY +V+     N++AA G  ++ AE  
Sbjct: 674 LANLYVTLARDARHSKSSKDQEKSKQSFLKATQLYQKVLQLDPLNVFAAQGIAIMFAESK 733

Query: 645 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 704
           +   + ++  +V+++      ++  DV +N+AH       +  A++ Y+  L+KF  +  
Sbjct: 734 RMGPALEILRKVRDS------LENEDVHVNIAHCLLDMREYVKAIEAYEFVLKKFCTDNS 787

Query: 705 ----AQILLYLARTHY-------EAEQWQDCKKSLLRAIHL-APSNY-TLRFDA----GV 747
               +++L  LAR  Y         + +Q+  +    A+   + SN+  LRF       V
Sbjct: 788 SMNKSRVLNLLARAWYSRGMRERSVQFFQNALEKASAALETESTSNFKNLRFLGVLKYNV 847

Query: 748 AMQKFS-ASTLQKT---RRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD--EKKIN 801
           A+  F  A TL++T    RT+  ++  +  L  A+ +   L  + N      +  E++I 
Sbjct: 848 ALLHFQIAETLRRTGPMLRTSAGMKDALVGLSEALVLLKELLESDNFKTVSKEELEQRIQ 907

Query: 802 THVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAA---------------------- 839
                 K  L+ A I +EA   EE QN++ +EA  Q A                      
Sbjct: 908 LGETTMKSALERAVIEQEAF--EEDQNKKIEEARIQQAKAGEEEEAKRKKAEEEARAAEE 965

Query: 840 --------LAEEARRKAEEQKKYLLEKRKLED 863
                   L EEAR+  EE++ Y+++++ + D
Sbjct: 966 KKNEEFRKLQEEARKLMEERESYMVDEKDVND 997


>gi|392594216|gb|EIW83541.1| RNA polymerase II-associated protein [Coniophora puteana RWD-64-598
           SS2]
          Length = 1123

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 21/300 (7%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG-------EVEQASSAF 106
           + T +R KEE+   A QY N   R+   E    VG     L +G        +E A  +F
Sbjct: 115 VLTGERTKEEYHREAAQYLNMGDRV-AAEGGESVGGALSFLTRGIHQFATRSMEDALRSF 173

Query: 107 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
           + VL     N+ AL+G+A + + R +Y  +L+ +++ LQ++P C    R+GIGLC + + 
Sbjct: 174 EGVLAEKPTNLVALMGKARLLYARRQYPQALKLFQQILQLNPRCLPDPRIGIGLCLWAMD 233

Query: 167 QLGKARQAFQRALQLDPE--NVEALVALAVMDLQANE-------AAGIRKGMEKMQRAFE 217
              KAR A+ R+ +++P   + + L+ L  ++   NE       A   R G + ++RAF+
Sbjct: 234 HKAKARSAWLRSAEVNPTQWSTQLLLGLEAINASKNESRPEEERANSFRVGTKHIERAFK 293

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
                A A N L   F   G +    +L E  +   +  P  +  Y   AR  H++G   
Sbjct: 294 TNNKSAAAANVLCELFVRKGNYKTALKLAERTIQFADTLPVVTEGYIRTARVLHAQGHVP 353

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A   +M + +   +PH  I    GL Q Q + G+  +A+   + +++  P+  ++  AL
Sbjct: 354 EATRLFMTAAE--GQPH-HILGAIGLAQTQTQSGEIAAAIHTLDTLVQP-PNPTKSADAL 409



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 134/590 (22%), Positives = 244/590 (41%), Gaps = 112/590 (18%)

Query: 385  DAFKTARTLLKKAG-EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 443
            DA + +       G E V   ++NN+  +    G  E A + ++DAL             
Sbjct: 518  DALRVSEVAAAVGGAERVDPRLVNNLAALAHMDGALEEAQRMYEDAL------------- 564

Query: 444  KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 503
                I ASA + Q  D     R + +G  +       T+L+NLAR+ E   D   A   Y
Sbjct: 565  ----IKASA-LAQQGDA----REKQNGEAM-----ATTMLYNLARVYEDSGDLERAKEAY 610

Query: 504  RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY-------------PNA 550
              +L ++ +Y+DA +RLA +    +    + +L+ +AL     +               A
Sbjct: 611  DKLLARHPEYIDAKIRLADMLYKSHQSNEAHDLLKQALTSQPSHLTLRAYYTHFLVSSAA 670

Query: 551  LSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLSLGNWNYFAALRNEKRAPKLEA 609
             +  G + ++    ++A   F  A+ +   K D YA  +    +Y   +  E   P L+ 
Sbjct: 671  PTTFGQVHMQP---LRAAYNFVYATLSDHNKHDVYAHCAAALVHYM--MNREMLRPPLDP 725

Query: 610  THLEKAK-------ELYTRVIVQHTSNLYAANGAGVVLAE------------KGQFDVSK 650
              L + K       E Y + +V       AA G  +V AE             G  D ++
Sbjct: 726  AQLAERKKGFVRSAEFYDKALVLDPCCAVAAQGLAIVTAEDALGSLVGAGHSAGSADEAQ 785

Query: 651  ----------DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFY 700
                      ++F +++E+ S        DV++N+ H Y+ + +F  A++ Y+    +F+
Sbjct: 786  RRVRSARDALEVFAKIRESISTG------DVYVNMGHCYYVREDFDRALESYETASSRFF 839

Query: 701  YNTDAQILLYLARTHY---EAEQWQDCKKSLLRAIHLA----PSNYTLRFDAGVAMQKFS 753
             N +A +L+   R  Y     +Q     KS L+   +A    P +    ++  V  QK +
Sbjct: 840  DNKNANVLMQQCRAWYAKANKDQSYASMKSALKYAEMARALEPEDKATTYNIAVIQQKAA 899

Query: 754  AS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLL 811
                 +   +R+  E+   + + +   + F  L+A  +  +  +D +     ++Y + +L
Sbjct: 900  ELLFNIPPAKRSVAELEEAIEQAKQGNKAFGELTADPSAAVP-YDRELAEQRMKYGEGML 958

Query: 812  DAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDE---QKRL 868
              A+       + E + R++ +A RQ  L E  R +A E++K   ++R++E E   + R 
Sbjct: 959  RRAEEQIANQRQFEDEAREKLDAVRQRRLEERLRLEAIEKEKE--DQRRVEAEALRETRK 1016

Query: 869  RQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGKRRKK 918
            RQQEE  + +K    SS             D+E    EKR RK G ++ K
Sbjct: 1017 RQQEEAAEWMKGYADSS-------------DEET--REKRPRKQGAKKVK 1051


>gi|422293909|gb|EKU21209.1| ctr9 protein, partial [Nannochloropsis gaditana CCMP526]
          Length = 890

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 181/368 (49%), Gaps = 34/368 (9%)

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
           +T +FNLA + + + +  AA  L   I  +Y  +V A+++L  +A  + + + +   +  
Sbjct: 392 LTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGR 451

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 599
           A ++  +     ++ G +E       +A+  F   +   D    YA ++LGN  +     
Sbjct: 452 ARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGD---PYAMVALGNLYFM---- 504

Query: 600 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK-GQFDVSKDLFTQVQE 658
           N    P  +A H+  A+  +T+V+ +   NLYAA+G G+VLAE+ G+ + ++ +   V+E
Sbjct: 505 NSVTVPD-KAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRE 563

Query: 659 AASGSVFVQMPD-VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA---QILLYLART 714
            +        PD + IN+AH++ AQ     A+  Y++ L+K   +TD    ++L Y++  
Sbjct: 564 RSGDK-----PDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHA 618

Query: 715 HYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAM-----QKFSASTLQKTRRTADEVRS 769
           H+    W+   +++L+A+H+ P    L F+ G+ +     + F  S  Q+T  +  E RS
Sbjct: 619 HFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRT-TSVSESRS 677

Query: 770 TVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAE---REEQ 826
              +L  A+ V S    A           K+   V+Y K  L  A+ + +A E   RE++
Sbjct: 678 AERDLSVAISVLSRPELAQAY-------PKVKRKVDYMKANLQLARQYVQAEEKRFREDE 730

Query: 827 QNRQRQEA 834
           ++R RQ A
Sbjct: 731 ESRTRQAA 738


>gi|443916822|gb|ELU37769.1| RNA polymerase II-associated protein [Rhizoctonia solani AG-1 IA]
          Length = 1077

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 152/688 (22%), Positives = 287/688 (41%), Gaps = 119/688 (17%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ KG   +A+     A   F IVL     NV AL+G+A + + R +Y ++L+ ++  L 
Sbjct: 156 YLTKGIYQMARFSWVGAEKDFDIVLAKHSSNVIALMGKARILYARKQYREALKGFQECLT 215

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN--VEALVALAVMDLQANEAA 203
           ++P      R+GIGLC ++L    +A  A++RA Q+ P++     L+ + +M++  +   
Sbjct: 216 LNPKMLPDPRIGIGLCYWQLEHRERALAAWKRAEQVHPDSWYPGLLIGIYMMNISKDPKV 275

Query: 204 -------GIRKGMEKMQRAF-EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
                     +G+ ++ +A+ E     A A   +++ F   GQ   + +  + A     H
Sbjct: 276 PGQQRQDAFLEGVNRLTQAWRESNLNNASAATAMSDVFLLKGQ---LNKALKAAERTIQH 332

Query: 256 GPTKS---HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
             T S   +     AR  H++G+Y+ A ++Y  + +E + P   +    GL Q+ + + +
Sbjct: 333 ADTLSVAVNGRLRAARVAHTEGNYDAALVHYRTAAEEPSHP---LLADIGLAQMHVHIDE 389

Query: 313 FRSALTNFEKVLEIYPDN-----CETLKALGHIYVQLG----QIEKAQELLRKAAK-ID- 361
             +A+ + +K+++            +L+A     +       +  KA+E+  K  + ID 
Sbjct: 390 LSAAIHDLDKLVQRNAGIEASAFLASLRAFPRPALSAADAATEQAKAKEIFDKVVRMIDN 449

Query: 362 ---------PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 412
                      D   +I++  L    +   A  A   A   +K AG      ++NN+ V+
Sbjct: 450 GAGSGTGGVASDRDMYIEIARLWQKDNADKATKALIQA---VKLAGTP-DARLINNVAVM 505

Query: 413 HFEKGEFESAHQSFKDA--LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 470
              +G+  +A   +++A  +G G                                   D 
Sbjct: 506 RHMEGDLVAAKSGYEEAAMVGGG-----------------------------------DS 530

Query: 471 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 530
           + V       TVL+NL RL E + DT  A  ++  +L ++ +YVDA LR A +  +    
Sbjct: 531 DDV-----VTTVLYNLGRLHEDLGDTTMAGEVFDKLLARHPEYVDATLRKAQLYMSAGRT 585

Query: 531 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDW-VKAKETFRAASDATDGKDSYATLSL 589
             +  LV +    + K  N  + +    L +D   V+    F   +   +  D +A L +
Sbjct: 586 SEAAALVKQVSHTHSKDLNVRAFVSYFALSSDPVPVQDARAFVYTTLNIERADVHA-LCV 644

Query: 590 GNW-NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE------ 642
             W NY  A        + +    + A +LY + ++   +   AA G  +++AE      
Sbjct: 645 AAWINYHMAREGRNMPEQDKKKRYKNAIDLYKQALLNDPTCAVAAQGLAIMIAEDVTGLA 704

Query: 643 --KGQ-----------FDVSKDLFTQVQEA-ASGSVFVQMPDVWINLAHVYFAQGNFALA 688
              GQ              +  +FT+V+E+   GSV+        N+ H YF +  +   
Sbjct: 705 IIPGQPQEEARQREVNLRDALGVFTRVRESLVDGSVYC-------NMGHCYFLREEY--- 754

Query: 689 MKMYQNCLRKFYYNTDAQILLYLARTHY 716
              Y+   R+FY  T+   L++L RT Y
Sbjct: 755 -DRYETASRRFYNGTNVSTLIHLTRTLY 781


>gi|261327024|emb|CBH09999.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 901

 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 191/822 (23%), Positives = 334/822 (40%), Gaps = 93/822 (11%)

Query: 71  YYNKASRIDMHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFN 129
           Y   AS   +  P     +G   +  G  ++ AS  F+  L  D+  + A +G A V F 
Sbjct: 69  YMADASASPLSRPVLLYLEGVAAMTSGTSLQTASMKFEEALRVDKHFILARMGLAAVCFY 128

Query: 130 RGRYSDSLEFYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
              Y  S   Y+  L+ V  S PG +R+G+GLC Y+LG++  A +  +RAL ++ E+V A
Sbjct: 129 MKDYKRSFSHYRAVLETVGSSAPGIVRVGLGLCAYRLGRMDAAVKWLERALAVNGEDVAA 188

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
           L++L V+ L       I++ ++ ++R  +++P  AM L    +  +F             
Sbjct: 189 LLSLLVVYLAQRR---IKEVIDVVRRLRKVFPDNAMILLKTTDILYFRA----------- 234

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
                + G  K+     LA S           L+ ++  +   +  +     Y  G++ L
Sbjct: 235 ----VSQGRVKA-----LAPSI----------LHLLSEARPTARVEDAAIADYQEGRLLL 275

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
            LGDF  A    E  +++ P+          +   LG+  +A++LL +     P   +  
Sbjct: 276 ALGDFTRARVLLESSMQVLPNCLAARVHYARLLFLLGRDVEAEQLLLRINAEHPNQKEVL 335

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK- 427
             L     +S  G    A + ++ L +      P +VL+        +   E + +    
Sbjct: 336 QMLAAH--ASHLGLHERALECSKLLTESVA---PGDVLSWTLAAWCSRLNSEESAKLLTH 390

Query: 428 -----DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
                + LG  + + L     K  +     ++ +  + +L   F +     ELP N V +
Sbjct: 391 VLHIYEELGTPVPMKL--RANKASMCGDIGTLQKILESELGEDFLSKP---ELPVNYVPI 445

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           ++N+ARLLE   D V A  LY  ++  +  +   Y RL  +AKA    + +I  +N   +
Sbjct: 446 VYNMARLLET-SDKVRACELYCYLVKHHPCFSYPYFRLYELAKAERCWRKAIMWMNLLRQ 504

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 602
                P AL  +  L  +   +  A    R A      +     L+LG       LR+ +
Sbjct: 505 AIPDEPRALVYICLLFFEQRRYAAAMNILRLAKT----RSCVVALALGQ----IYLRHAQ 556

Query: 603 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 662
           +        LE AK+ +   + +   N+ AA+G    L  +G+ +    L  +V E    
Sbjct: 557 QHSGDSYRFLELAKDRFHFALQKDKGNVLAAHGMACCLGLEGRHESCLLLLDRVGEIVPN 616

Query: 663 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 722
             +V+      ++A+      +F  A+   Q   ++    + +     LA   +   ++ 
Sbjct: 617 CSYVR-KHYEAHMANAKILSDSFKQAIDYLQRDPQRAPLQSSS-----LAFCLFCEGRYA 670

Query: 723 DCKKSLLRAIHLAPSNYTLRFD-AGVAMQKFSASTLQKTRRT---ADEVRSTVAELENAV 778
           D      +A++  PS   LRF+ A +    F AS  QK  ++   A E+RS + E  N  
Sbjct: 671 DAIAVQKKAVNELPSEPLLRFNLALLYCASFVASISQKQEQSVQEAKELRSFLTEGLNIA 730

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLD------AAKIHREAAEREEQQNRQRQ 832
             F  + + S        +K +     YC H  D       A  HR A E E Q      
Sbjct: 731 HEFIKIESESRRLSEA--KKLLKQLCAYCVHHNDLSIPKVVANGHRAALEAERQD----- 783

Query: 833 EAARQAALAEEARRKAEE-QKKYLLEKRKLEDEQKRLRQQEE 873
                   AE  R   E  ++K +LE+R+L DE +R R+QE+
Sbjct: 784 --------AEWCRVYNEHLEQKRMLEERRLADEHQR-REQEQ 816


>gi|154284115|ref|XP_001542853.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150411033|gb|EDN06421.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1227

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 205/914 (22%), Positives = 348/914 (38%), Gaps = 218/914 (23%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ +++    IL  G    +      V  E++ +L  +   Y             G++
Sbjct: 77  YAKQNQIDHAIDILNRG----LSSLAQGVTKEKLGLLGWICWLYMRKSREAPRVAPEGQL 132

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEA 112
            ++ + K+ +   AT   N+ASR++   PS ++ +G L + +  ++  + A +  +V  +
Sbjct: 133 VSEAKTKDYYLQAATSTLNEASRLNPAYPSLFLARGVLSILRASLQPPAKALRPGMVDTS 192

Query: 113 DR--------------------DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           +R                     N  A+LG+A  ++  GRY+++LE Y+     +     
Sbjct: 193 ERVETLRQALKCFDESAKSFGNRNGMAILGRARAQYMLGRYAEALEGYQEGSDKNAEYER 252

Query: 153 A--IRLGIGLCRYKLGQLGKARQAFQRALQL-----DPENVEALVALAVMDLQANEAAGI 205
           +  +RL +G C   L QL   RQA    L L        N  A  +L  + +        
Sbjct: 253 SWILRLELGGC---LWQLDFKRQAKAAGLVLWLCSRHATNDPAFGSLYKIAM-------- 301

Query: 206 RKGMEKMQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNHGPTKS 260
               +  Q+AF++   YP  C+M   Y     F   +HF  VE L   A+ +T+     S
Sbjct: 302 ---TQYTQKAFKVDKEYPMTCSMFGGY-----FLLRKHFPTVEALARKAIELTDVNAIAS 353

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTN 319
             +Y LAR  H +G+  +A  YY  S +          P  +G  Q+Q++ GD+  A   
Sbjct: 354 DGWYLLARKEHFEGNSARANEYYTRSDQARGGGDRGYLPAKFGAVQMQVRTGDYDGAKFR 413

Query: 320 FEKVLEIYPDNCETLKALGHIYVQ--------------LGQIEKAQELLRKA-------- 357
            EK+++    N E++  LG ++ +                +++KA  LL           
Sbjct: 414 LEKIIQ-QTKNPESMTLLGALFAEEVFAAQSSPLKEDKSAEVKKATSLLESVRASWKDEK 472

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFK-----------------------TARTLL 394
            K+ P D    + L  L  S     ++   +                       T   LL
Sbjct: 473 KKLSP-DESVLLYLARLYESGSPEKSMQCLQHVEQMQLAQIPDTERPEDIHDEETTTNLL 531

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +   E +  ++LNN+G   +   + E A   F+         T L++  K+   D SA  
Sbjct: 532 R---EHLAPQLLNNMGCFLYHSEKIELARNMFQ---------TALNACVKSRDRDDSADT 579

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
             F                       T+ +NLAR  E       A  +Y  +L ++ DY 
Sbjct: 580 DAFV---------------------TTISYNLARTYEAASMPEEAKKVYEGLLERHSDYT 618

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAK 568
           +A  RL  IA       L     +E        P  ++ L +LE  N +      W  +K
Sbjct: 619 EANARLTYIA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSK 664

Query: 569 ETFRAASDATDGK--------------DSYATLSLGNWNYFAA---LRNEKRAPKLEATH 611
              R A+ A D +              D Y+   +GN    AA    R+ ++  +     
Sbjct: 665 SKRRVANIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNIFLLAARDMRRDTEQDREKRRKM 724

Query: 612 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD- 670
            EKA E + + +     N YAA G  + L      D  KD  T VQ      +F ++ D 
Sbjct: 725 YEKAVEFFDKALQLDPKNAYAAQGIAIAL-----VDDRKDYTTAVQ------IFSRIRDT 773

Query: 671 -----VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ--- 722
                V++NL HVY     F+ +++ Y+  L K     D QIL  L R        +   
Sbjct: 774 LRDASVYLNLGHVYAELRQFSKSIENYEAALSK-DRQRDTQILACLGRVWLLKGMQEMNL 832

Query: 723 -------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAE 773
                  DC +   RA  +AP    L F+      + +    +L +T+++  +V+     
Sbjct: 833 AAMNTALDCTQ---RARAIAPEQIHLEFNVAFVQNQIAQLVVSLPETQKSLQDVQIASDG 889

Query: 774 LENAVRVFSHLSAA 787
           L+ A+  FS ++ A
Sbjct: 890 LDEAINTFSQIAKA 903


>gi|401838480|gb|EJT42095.1| CTR9-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 746

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 145/614 (23%), Positives = 255/614 (41%), Gaps = 125/614 (20%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQ++ +N  
Sbjct: 182 YQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDPKMAIKSWQRALQINSKNTS 241

Query: 188 ALVALAVMDLQAN-----------EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 236
           A + + + +   +           EA G  K +  +   F       + L  L  +++F 
Sbjct: 242 ASILVLLGEFHDSLIDSSNDDTFKEAFG--KALIDLNTVFSENQNHPVLLTLLQTYYYFK 299

Query: 237 GQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMAS 286
           G +       +T L + +H   K          S S +   R++++ GDY K+ + +  S
Sbjct: 300 GDY-------QTVLNIYHHKIIKMSPLIAKTVLSESSFWCGRAHYALGDYRKSFIMFQES 352

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL-- 344
           +K   K  + +    GLGQ Q+K      ++  FE    +Y  N E+L+ L +I   L  
Sbjct: 353 LK---KNEDNLLAKLGLGQTQIKNNLLEESIITFEN---LYKTN-ESLQELNYILGMLYA 405

Query: 345 -----GQI-------------EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 386
                G++             EKA + L +  K+        I     L+ S    + + 
Sbjct: 406 GKALDGKMIKNLPAKELSNLNEKALKYLERYLKLALAMKNQLIISRAYLVISQLYESQNQ 465

Query: 387 FKTARTLLKKAGE--------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 438
           +KT+   L KA E        E+P+++LNN+   HF  G+   A   FK A         
Sbjct: 466 YKTSLDYLSKALEEMEFINQNEIPLDILNNLACYHFINGDLTKADDFFKQA--------- 516

Query: 439 LDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA 498
              K K    D S +                          VT+ +N+AR  E+ +D   
Sbjct: 517 ---KAKVSGTDESVN--------------------------VTLEYNIARTNEK-NDPEK 546

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLG 555
           +  +Y  I   +  Y+ A +R   +  A++ ++   +S+++ ++ L+VN       S  G
Sbjct: 547 SECIYSQITSSHPAYIAARIRNLYLKFAQSKIEDSAMSVQM-DDLLEVNKSDLEIRSFYG 605

Query: 556 DLELKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----LRNEKRAPK 606
              LKN    K  E     +  T       D+YA +SL N     A      RN K   K
Sbjct: 606 -WYLKNSKERKNNEKSTTHNKETLVKYSSHDAYALISLANLYVTIARDGKKSRNPKEQEK 664

Query: 607 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 666
            + ++L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++       
Sbjct: 665 SKHSYL-KAIQLYQKVLQVDPYNIFAAQGVAIIFAESKRLGPALEILRKVRDSLDNE--- 720

Query: 667 QMPDVWINLAHVYF 680
              DV +NLAH Y 
Sbjct: 721 ---DVQLNLAHCYL 731


>gi|26333697|dbj|BAC30566.1| unnamed protein product [Mus musculus]
          Length = 211

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 6/165 (3%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREK 61
           EY+KQGK E+F ++LE   +  ID    Y D   +++  L+ L  YY    + E  +  K
Sbjct: 50  EYYKQGKTEEFVKLLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNK 106

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPAL 120
           ++    AT  Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PAL
Sbjct: 107 KDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPAL 166

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           LG+AC+ FN+  Y  +L +YK+AL+ +P CP  +RLG+G C  KL
Sbjct: 167 LGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKL 211


>gi|342180304|emb|CCC89781.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
          Length = 663

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 135/620 (21%), Positives = 257/620 (41%), Gaps = 84/620 (13%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACV 126
             QY   A+   +H P+    +G   +A G   + AS  F+  +  D   + A LG A V
Sbjct: 72  VAQYMADAAASHLHRPAVLYLEGVAAMAGGTNFQTASVKFEEAIRIDPHFILARLGLAAV 131

Query: 127 EFNRGRYSDSLEFYKRALQVH-PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
            F  GRY +S   Y+  L+    S P  +R+G+GLC Y LG+L  A +   RAL++DP +
Sbjct: 132 CFYMGRYKNSFSHYRAVLETFGSSAPSIVRVGMGLCSYHLGRLEYAVKWLDRALEVDPND 191

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
             AL+AL V+ L       + K +E +QR   + P  A+ L  +A+  +F      V + 
Sbjct: 192 ATALLALLVISLNQRR---MLKVVEVVQRLRTVLPDNAVVLLKVADLLYFRA----VSEK 244

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
              AL+ T                           L  + SV+ +    E     Y  G+
Sbjct: 245 RVKALSRTI--------------------------LRLLTSVRHVASAEESAIADYQEGR 278

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
           + + LG+  +A T  E  +++ P+          + +  G+  +A++LL +     P   
Sbjct: 279 LLVALGELANARTLLESSMQVLPNLLAARIHYARLLLLSGRDMEAEQLLLRINAEHPNQK 338

Query: 366 QAF----------------IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
           +                  ++  +LL  S     + ++  A    +  G+E   ++L N+
Sbjct: 339 EVLQMLAAQASRLGLLGRALECSKLLTDSIAPGDIRSWSLAAWCARLNGDESK-KLLGNL 397

Query: 410 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA--SASMLQFKDMQLFHRFE 467
             IH E GE  + +     A  +       D +    ++D+   A  L    + + H   
Sbjct: 398 VRIHKEVGEPVTMNMLVNVASVNR------DVEALQRILDSELGADFLSTPKLSVAH--- 448

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
                       V +++NLA LLE+  D   +  LY  ++ ++  +   Y+RL  +A+A 
Sbjct: 449 ------------VPLVYNLALLLEK-DDPERSRKLYIFLVKQHGHFRLPYIRLHVLARAA 495

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATL 587
             L+ ++  +    ++    P+++  + +L  +   +  A    R+A    +G+     L
Sbjct: 496 GRLREAVSWMVLVQQILPDEPHSIVSIAELYFRQKRFAVAMFILRSA----EGRSLPVAL 551

Query: 588 SLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 647
           +LG+   +   + +K + +     +E A++ +  V+ +   N+ AA+G        G++D
Sbjct: 552 ALGSIYLWCGQQRDKDSRRF----VEVARDRFAYVLRKDKGNVLAAHGLACCFGLVGEYD 607

Query: 648 VSKDLFTQVQEAASGSVFVQ 667
             + L  +V E      +V+
Sbjct: 608 NCQSLLDRVGEVLPNCDYVR 627


>gi|50308067|ref|XP_454034.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643169|emb|CAG99121.1| KLLA0E01915p [Kluyveromyces lactis]
          Length = 1073

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 205/890 (23%), Positives = 362/890 (40%), Gaps = 165/890 (18%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKG----QLLLAKGEVEQASSAFKIVLEADRD 115
           E+ ++  LA  +  +AS+ D     TW+G      +L   +G  ++A     I +++ +D
Sbjct: 112 ERNKYLSLAETHVIEASKQD----PTWIGNRLATVELYFQRGMYDRALEYTDIFIKSVQD 167

Query: 116 -----------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
                      N+  ++ +A + + +  Y  +L  ++  L ++P+     R+GIG+C + 
Sbjct: 168 EDKRSGSVNKPNIMFIIMRAKLMYIKKNYHGALRLFQELLLLNPTLVPDPRIGIGMCFWH 227

Query: 165 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
           L     A  A++R+  +  ++  A + + +     +  +     M K      +     +
Sbjct: 228 LKDRSMAIAAWERSAAVSGKDSVAAILVLLGKFHNSLTSSTNDEMFKTSFTNAVLDLDTL 287

Query: 225 --------ALNYLANHFFFTGQHF-----LVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
                    L  L   +F+  Q +     + EQ   +  A+ +       S++ + R+Y+
Sbjct: 288 YQERGPHPVLLALLQVYFYMNQKYDKVITIYEQKIMSRSAMISDQILSESSFW-VGRAYY 346

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
           ++GD  KA  Y+  ++K   K    +    GLGQ Q+K      ++  FE + +      
Sbjct: 347 AQGDSRKAFHYFQEALK---KNEGNLLAKIGLGQSQVKNNLVEESILTFENIYQSNESLQ 403

Query: 332 ETLKALGHIYV-------------QLGQI-EKAQELLRKAAKIDPRDA------QAFIDL 371
           E    LG +Y              +L +I +KA + L K   +           +A++ L
Sbjct: 404 EINYILGLLYASKCFNTTVKVSSAELRKITDKAIQFLEKYVHLTKAKGNQIVINKAYLLL 463

Query: 372 GELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            EL  I ++   ++D  +     L   GEE P+EVLNN+G  +F  GE+E A   F++A 
Sbjct: 464 SELYEIKNNYKQSIDYLQKGIDQLHIQGEETPLEVLNNLGCFYFVTGEYEKAQNLFQEAS 523

Query: 431 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
              I   + DSK                                    KVT+ +N AR L
Sbjct: 524 AKVI---VHDSK------------------------------------KVTLDYNTARAL 544

Query: 491 EQIHDTVAASVLYRLILFKYQDYVDAYLR---LAAIAKARNNLQLSIELVNEALKVNGK- 546
           E   D   +  +Y  IL  +  Y+ A +R   L  I    +NL+  I+ V    + NG+ 
Sbjct: 545 EHT-DKAKSHDIYTAILTDHPKYISARIRDIHLKFINHPESNLKDEIKSVLTENESNGEV 603

Query: 547 ---YPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFA------- 596
              Y   L  LG    +++    +KET        D  D YA +SL N  Y A       
Sbjct: 604 RAFYAWYLKKLGK-PAEHEMSEHSKETLVK----YDSHDLYALISLANL-YVAIARDQKK 657

Query: 597 ALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQV 656
           + RN K A K   ++L KA +LY +V+     N++AA G  ++ AE  ++  S ++  ++
Sbjct: 658 SARNSKDANKSIESYL-KATQLYQKVLQVDPMNIFAAQGLAIIFAENKRYGQSLEVLRKI 716

Query: 657 QEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILL-YLARTH 715
           +++           V INL H       +A A++ Y+  L +F       +LL  L R  
Sbjct: 717 RDSLDNQ------SVHINLGHCLSEMREYAKAIENYEIALNRFDNPKSKPLLLNLLGRCW 770

Query: 716 Y-------EAEQWQDCKKSLLRAIHLAPS----NYTLRFDAGVAMQKFSASTLQKTRRTA 764
           Y         E  Q     + RA  L  +      T  +   +A+ +F  +  ++ RR++
Sbjct: 771 YLRALKERSLEAVQKALGYVKRAYDLESAKVNGKMTSSYKFNLALLEFQVA--EQMRRSS 828

Query: 765 DEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE 824
            + R T+A+LE ++    +                    +   K LL+   I   + + E
Sbjct: 829 PKER-TMADLEASIEGLQY-------------------GISLLKELLETKSIVIPSEQLE 868

Query: 825 EQQNRQRQEAARQAALAEEARRKAEEQKKYLLE-KRKLEDEQKRLRQQEE 873
             Q  Q  E   + AL     R  E+QK Y LE   K+E+ +K L +Q E
Sbjct: 869 --QRIQLGETTMKTAL----ERSIEDQKAYELEISAKMENARKVLEEQRE 912


>gi|363748733|ref|XP_003644584.1| hypothetical protein Ecym_2007 [Eremothecium cymbalariae DBVPG#7215]
 gi|356888217|gb|AET37767.1| Hypothetical protein Ecym_2007 [Eremothecium cymbalariae DBVPG#7215]
          Length = 1113

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 219/976 (22%), Positives = 404/976 (41%), Gaps = 186/976 (19%)

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA-------- 112
            +E+H I A Q  N  S I+ ++PS WVG    +LA  ++    + +   LE         
Sbjct: 113  REQHLIQAEQ--NLRSAIE-YDPS-WVGN---MLATVDLYYQRNFYDKALETADIFIKKG 165

Query: 113  ----------DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 162
                       R NV  LL +A + + +  Y+ SL  ++  L + P+     R+GIGLC 
Sbjct: 166  QEDDKRQGKPSRLNVLFLLMRAKLLYQKKNYAASLRLFQELLVLDPTLDPDPRIGIGLCF 225

Query: 163  YKLGQLGKARQAFQRALQLDPENVEA--LVALA----VMDLQANEAAGIRKGMEKMQRAF 216
            ++L     A ++++RALQL+ +N  A  LV L      + +  N+   + +  + +    
Sbjct: 226  WQLKDSSMAIKSWERALQLNHKNRTARILVMLGNFRNALTVSENDQQFVDQFTDVLSDLK 285

Query: 217  EIY------PYCAMALNYLANHFFFTGQHFLV-----EQLTETALAVTNHGPTKSHSYYN 265
             I+      P   + L +   +++ TG +  V     +++++ A  V N     S S + 
Sbjct: 286  NIFVENRETPVLLVLLQF---YYYLTGNYDNVIAIYEKKISQWAPLVAN--TILSDSAFW 340

Query: 266  LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
              R+Y++K D+ +A   +  S++   +  + +   +GLGQ QL+   F  ++  FE + +
Sbjct: 341  CGRAYYAKSDFRRAFSMFQESLR---RNEDNLLAKFGLGQSQLQNKLFEESILTFENIYK 397

Query: 326  IYPDNCETLKALGHIYV------QLGQIE---------KAQELLRKAAKIDPRDAQAFID 370
                  E    LG +Y       Q  ++          K+   L K  K+        + 
Sbjct: 398  TQESIQELNYILGLLYSAKCFDNQFSKLSAKEKSSLVGKSINFLEKYIKLTTAKKNQLVA 457

Query: 371  LGELLISSDTGAALDAFKTARTLLKKAG--------EEVPIEVLNNIGVIHFEKGEFESA 422
            +   L+ S+       +K +   L KA         E++ +E+ NN+G  HF  G+ +SA
Sbjct: 458  VKAYLVLSELYELQTQYKQSLQYLSKAVDQWKYSGLEDISLEISNNLGCFHFINGDIKSA 517

Query: 423  HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
             + F++A                   DA +S                 NH  +  ++ TV
Sbjct: 518  RKYFQEAF------------------DAISST----------------NHKNI--SETTV 541

Query: 483  LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA-------KARNNLQLSIE 535
             +N+AR  E   D   +  LY+ IL ++  YV A +R   +        K   +L+  +E
Sbjct: 542  KYNIARAAES-EDPEKSMSLYQQILSEHPGYVQAKIRSIFLKYLEDKEDKFATDLEELLE 600

Query: 536  LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET--FRAASDATDGKDSYATLSLGNWN 593
              +  L+V   Y   L  +     KND   + +ET   R      D  D YA +SL N  
Sbjct: 601  QNDSDLEVRSFYSWYLKNVS--REKNDANGEDRETKHNRETLTKYDSHDLYALISLAN-Q 657

Query: 594  YFAALRNEKRAP------KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 647
            Y    R+ K++       K + + L KA +L+ +V+     N++AA G  ++ A+  +F 
Sbjct: 658  YVTIARDTKKSSSQKEQDKSKQSFL-KAVQLFQKVLQIDPLNIFAAQGLAIIFADSKRFG 716

Query: 648  VSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF----YYNT 703
             + ++  +V+++          DV +NLAH      +F  +++ Y+  L +F    + +T
Sbjct: 717  QALEILRKVRDSLDNE------DVHLNLAHCLLEMKDFVKSIENYEITLSRFENIGHKST 770

Query: 704  DAQILLYLARTHYEAEQWQDCKKSLLR----AIHLAPSN------YTLRFDAGVAMQKFS 753
               +L +   +    E+   C +  L+    A+ L  +       Y+L F+  VA  +F 
Sbjct: 771  VLNLLAFAWYSRGLKEKSLACFQKALQYTKEALQLETNTPESKFVYSLMFN--VAFIEFQ 828

Query: 754  -ASTLQKT---RRTADEVRSTVAELENAVRVFSHLSAASNLHLHG--------FDEKKIN 801
             A  L++     RT  ++  ++ +L+ AV +    S + ++   G          E  + 
Sbjct: 829  IAEVLRRAGPRDRTLAQLEQSLVDLDEAVNLLKKFSNSHSVLDSGEEIQQRIQLGEGTMK 888

Query: 802  THVEYC------------KHLLDAAKIHREAAEREEQQNRQRQEAARQAAL--AEEARRK 847
              +E C              L +A K+  E  +RE ++ R+ +E  R       E+ +R 
Sbjct: 889  GALERCIKEQKEYEEKKDMKLANAKKLMEEEEQRERERLRKLEEEERIKREKQTEQFKRL 948

Query: 848  AEEQKKYLLEKRKLED---------EQKRLRQQEEHFQRVKEQWRSSTPASKRRERSEND 898
             EE ++ + E+  +ED                +EE  ++  +  +       +R ++  D
Sbjct: 949  QEEAQRLMEERATIEDFMDDSNLPPSDSEFADEEEGAEKKTKAKKKKPTKRAKRTKTTTD 1008

Query: 899  DDEVGHSEKRRRKGGK 914
             DE     KRRRK  K
Sbjct: 1009 VDEESVPTKRRRKSKK 1024


>gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus glucosetrophus
           SIP3-4]
 gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
           SIP3-4]
          Length = 927

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 203/477 (42%), Gaps = 66/477 (13%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG I +++R+ EE    A   +  A R+           G  L+    VE+A   +K
Sbjct: 246 YNNLGNIFSRKRQFEE----ALSCFENAIRLQPTYLKAHCNAGNALIDLERVEEAIHHYK 301

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRY--- 163
             LE   D+  A            RY++++  Y+RA+ + P+   AI  LGI LC     
Sbjct: 302 KALEIHPDHAEAHNSLGIAYSKLSRYNEAIASYQRAIALMPNYAEAICNLGITLCATLEV 361

Query: 164 -----------------------------KLGQLGKARQAFQRALQLDPENVEALVALAV 194
                                         LG+  +A   ++ AL+L  +N + + ALA 
Sbjct: 362 EAAIPLLKQSLAIYADNLIAHVHLAETYAVLGRFEEAAPHYEYALKLSEKNPQLINALAN 421

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
           + ++  +    +   E  +RA EI P    ALN L N       H  + Q  E  L    
Sbjct: 422 IYVKTGQHDLAK---EYFERALEIDPRFTDALNNLGN---LHHSHDRISQAIECYLKSIA 475

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P  + +Y NL  SY S  DYEKA   Y  +++    P ++   YY LG  Q+++  FR
Sbjct: 476 IKPDSARAYSNLGNSYSSLKDYEKAIDAYKTAIRL--DP-QYSDAYYNLGTAQMEIKQFR 532

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+ ++++VLEI PD+ + +  LG  +  L + ++A+E+  K    +    +A+ ++G +
Sbjct: 533 DAIYSYKQVLEIEPDSVKAMNNLGVAHTALNEFKQAEEIFSKVFSYETGHLEAYGNMGNV 592

Query: 375 LISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF------K 427
             S++    ++  ++ A  +  K       E L N+G+++  +G+FE   + +      +
Sbjct: 593 CCSNNQLEESIKWYEKALEIDAKNP-----ETLWNLGLVYLRQGDFEQGWKHYEVRWDRR 647

Query: 428 DA-----LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN---HVELP 476
           DA         +WL       K  +I A   +  F  M  +    N+ N   ++E P
Sbjct: 648 DAKPVTPTPYPLWLGEFSISGKNLLIQAEQGLGDFIQMLRYMTILNEMNVSCYIETP 704



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 129/584 (22%), Positives = 251/584 (42%), Gaps = 82/584 (14%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LGV +  LG++E            AT  Y +A R++      +   G +L A+G+  +A+
Sbjct: 113 LGVSHAALGQLEP-----------ATASYKEAIRLNPAYIKAYRNLGVVLEAQGKHTEAT 161

Query: 104 SAFKIVLEADRDNVPALLGQACVEFN-RGRYSDSLEFYKRALQVHPS-----CPGAIRLG 157
           +A++ +L+   D+  A   Q  + F+ + ++ +++  Y RA++++P      C  AI LG
Sbjct: 162 AAYQSLLKFRPDDAEAH-HQLAINFSTQKKFDEAIIHYSRAIEINPEFVDAYCNKAIALG 220

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENV-----------------EAL------VALAV 194
                 KL +L  A   ++ A++L P+                   EAL      + L  
Sbjct: 221 ------KLNKLEDAILMYKAAIELVPDEASIYNNLGNIFSRKRQFEEALSCFENAIRLQP 274

Query: 195 MDLQANEAAG--------IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
             L+A+  AG        + + +   ++A EI+P  A A N L   +    ++       
Sbjct: 275 TYLKAHCNAGNALIDLERVEEAIHHYKKALEIHPDHAEAHNSLGIAYSKLSRYNEAIASY 334

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           + A+A+    P  + +  NL  +  +  + E A      S+       + +  +  L + 
Sbjct: 335 QRAIALM---PNYAEAICNLGITLCATLEVEAAIPLLKQSLAIYA---DNLIAHVHLAET 388

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
              LG F  A  ++E  L++   N + + AL +IYV+ GQ + A+E   +A +IDPR   
Sbjct: 389 YAVLGRFEEAAPHYEYALKLSEKNPQLINALANIYVKTGQHDLAKEYFERALEIDPRFTD 448

Query: 367 AFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
           A  +LG L  S D    A++ +  +  +   +         +N+G  +    ++E A  +
Sbjct: 449 ALNNLGNLHHSHDRISQAIECYLKSIAIKPDSA-----RAYSNLGNSYSSLKDYEKAIDA 503

Query: 426 FKDALGDGIWLTLLDSK-TKTYVIDASASM--LQFKDMQLFHRFENDGNHVELPWNKVTV 482
           +K A+        LD + +  Y    +A M   QF+D    ++       +E+  + V  
Sbjct: 504 YKTAIR-------LDPQYSDAYYNLGTAQMEIKQFRDAIYSYK-----QVLEIEPDSVKA 551

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           + NL      +++   A  ++  +      +++AY  +  +  + N L+ SI+   +AL+
Sbjct: 552 MNNLGVAHTALNEFKQAEEIFSKVFSYETGHLEAYGNMGNVCCSNNQLEESIKWYEKALE 611

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYAT 586
           ++ K P  L  LG + L+  D+ +  + +    D  D K    T
Sbjct: 612 IDAKNPETLWNLGLVYLRQGDFEQGWKHYEVRWDRRDAKPVTPT 655



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 130/592 (21%), Positives = 234/592 (39%), Gaps = 68/592 (11%)

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           +Y  ++  Y +A+ + P    A    +G+    LGQL  A  +++ A++L+P  ++A   
Sbjct: 88  QYPQAIASYMQAIALKPDRAEA-YYNLGVSHAALGQLEPATASYKEAIRLNPAYIKAYRN 146

Query: 192 LAVMDLQA----NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           L V+ L+A     EA    + + K  R  +   +  +A+N       F+ Q    E +  
Sbjct: 147 LGVV-LEAQGKHTEATAAYQSLLKF-RPDDAEAHHQLAIN-------FSTQKKFDEAIIH 197

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            + A+  + P    +Y N A +       E A L Y A+++ +  P E    Y  LG + 
Sbjct: 198 YSRAIEIN-PEFVDAYCNKAIALGKLNKLEDAILMYKAAIELV--PDEASI-YNNLGNIF 253

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            +   F  AL+ FE  + + P   +     G+  + L ++E+A    +KA +I P  A+A
Sbjct: 254 SRKRQFEEALSCFENAIRLQPTYLKAHCNAGNALIDLERVEEAIHHYKKALEIHPDHAEA 313

Query: 368 FIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
              LG      S    A+ +++ A  L+    E +      N+G+      E E+A    
Sbjct: 314 HNSLGIAYSKLSRYNEAIASYQRAIALMPNYAEAI-----CNLGITLCATLEVEAA---- 364

Query: 427 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE----LPWNKVTV 482
                    + LL      Y  +  A +   +   +  RFE    H E    L      +
Sbjct: 365 ---------IPLLKQSLAIYADNLIAHVHLAETYAVLGRFEEAAPHYEYALKLSEKNPQL 415

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           +  LA +  +      A   +   L     + DA   L  +  + + +  +IE   +++ 
Sbjct: 416 INALANIYVKTGQHDLAKEYFERALEIDPRFTDALNNLGNLHHSHDRISQAIECYLKSIA 475

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGN----------- 591
           +      A S LG+      D+ KA + ++ A    D + S A  +LG            
Sbjct: 476 IKPDSARAYSNLGNSYSSLKDYEKAIDAYKTAIR-LDPQYSDAYYNLGTAQMEIKQFRDA 534

Query: 592 -WNYFAALRNEKRAPK----LEATH-----LEKAKELYTRVIVQHTSNLYAANGAGVVLA 641
            ++Y   L  E  + K    L   H      ++A+E++++V    T +L A    G V  
Sbjct: 535 IYSYKQVLEIEPDSVKAMNNLGVAHTALNEFKQAEEIFSKVFSYETGHLEAYGNMGNVCC 594

Query: 642 EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 693
              Q + S   + +  E     +  + P+   NL  VY  QG+F    K Y+
Sbjct: 595 SNNQLEESIKWYEKALE-----IDAKNPETLWNLGLVYLRQGDFEQGWKHYE 641



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G+   A   + +VLE  P+N + L  LG  Y+Q     +   +++KA + +PR A A  +
Sbjct: 19  GNLMEAQNYYSQVLEESPENPDALHLLGVTYMQSRDYARCIPVIQKALEYNPRHADAHYN 78

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKD 428
           LG          A+  +  A     +A    P   E   N+GV H   G+ E A  S+K+
Sbjct: 79  LGIAF------GAVRQYPQAIASYMQAIALKPDRAEAYYNLGVSHAALGQLEPATASYKE 132

Query: 429 AL 430
           A+
Sbjct: 133 AI 134


>gi|72386981|ref|XP_843915.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62176396|gb|AAX70505.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70800447|gb|AAZ10356.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 901

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 186/812 (22%), Positives = 324/812 (39%), Gaps = 92/812 (11%)

Query: 71  YYNKASRIDMHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFN 129
           Y   AS   +  P     +G   +  G  ++ AS  F+  L  D+  + A +G A V F 
Sbjct: 69  YMADASASPLSRPVLLYLEGVAAMTSGTSLQTASMKFEEALRVDKHFILARMGLAAVCFY 128

Query: 130 RGRYSDSLEFYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
              Y  S   Y+  L+ V  S PG +R+G+GLC Y+LG++  A +  +RAL ++ E+V A
Sbjct: 129 MKDYKRSFSHYRAVLETVGSSAPGIVRVGLGLCAYRLGRMDAAVKWLERALAVNGEDVAA 188

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
           L++L V+ L       I++ ++ ++R  +++P  AM L    +  +F             
Sbjct: 189 LLSLLVVYLAQRR---IKEVIDVVRRLQKVFPDNAMILLKTTDILYFRA----------- 234

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
                + G  K+     LA S           L+ ++  +   +  +     Y  G++ L
Sbjct: 235 ----VSQGRVKA-----LAPSI----------LHLLSEARPTARVEDAAIADYQEGRLLL 275

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
            LGDF  A    E  +++ P+          +   LG+  +A++LL +     P   +  
Sbjct: 276 ALGDFTRARVLLESSMQVLPNCLAARVHYARLLFLLGRDVEAEQLLLRINAEHPNQKEVL 335

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK- 427
             L     +S  G    A + ++ L +      P +VL+        +   E + +    
Sbjct: 336 QMLAAH--ASHLGLHERALECSKLLTESVA---PGDVLSWTLAAWCSRLNSEESAKLLTH 390

Query: 428 -----DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
                + LG  + + L     K  +     ++    + +L   F +     ELP N V +
Sbjct: 391 VLHIYEELGTPVPMKL--RANKASMCGDIGTLQNILESELGEDFLSKP---ELPVNYVPI 445

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           ++N+ARLLE   D V A  LY  ++  +  +   Y RL  +AKA    + +I  +N   +
Sbjct: 446 VYNMARLLET-SDKVRACELYSYLVKHHPCFSYPYFRLYELAKAERCWRKAIMWMNLLRQ 504

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 602
                P AL  +  L  +   +  A    R A      +     L+LG       LR+ +
Sbjct: 505 AIPDEPRALVYICLLFFEQRRYAAAMNILRLAKT----RSCVVALALGQ----IYLRHAQ 556

Query: 603 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 662
           +        LE AK+ +   + +   N+ AA+G    L  +G+ +    L  +V E    
Sbjct: 557 QHSGDSYRFLELAKDRFHFALQKDKGNVLAAHGMACCLGLEGRHESCLLLLDRVGEIVPN 616

Query: 663 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 722
             +V+      ++A+      +F  A+   Q   ++    + +     LA   +   ++ 
Sbjct: 617 CSYVR-KHYEAHMANAKILSDSFKQAIDYLQRDPQRAPLQSSS-----LAFCLFCEGRYA 670

Query: 723 DCKKSLLRAIHLAPSNYTLRFD-AGVAMQKFSASTLQKTRRT---ADEVRSTVAELENAV 778
           D      +A+   PS   LRF+ A +    F AS  QK  ++   A E+RS + E  N  
Sbjct: 671 DAIAVQKKAVDELPSEPLLRFNLALLYCASFVASISQKQEQSVQEAKELRSFLTEGLNIA 730

Query: 779 RVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLD------AAKIHREAAEREEQQNRQRQ 832
             F  + + S        +K +     YC H  D       A  HR A E E Q      
Sbjct: 731 HEFIKIESESRRLSEA--KKLLKQLCAYCVHHNDLSIPKVVANGHRAALEAERQD----- 783

Query: 833 EAARQAALAEEARRKAEE-QKKYLLEKRKLED 863
                   AE  R   E  ++K +LE+R+L D
Sbjct: 784 --------AEWCRVYNEHLEQKRMLEERRLAD 807


>gi|156051218|ref|XP_001591570.1| hypothetical protein SS1G_07016 [Sclerotinia sclerotiorum 1980]
 gi|154704794|gb|EDO04533.1| hypothetical protein SS1G_07016 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1016

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 214/518 (41%), Gaps = 104/518 (20%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE---- 60
           Y KQ KV+   ++L +G S            ER+++L  L   Y +  K   + R     
Sbjct: 85  YAKQKKVDHAIEMLTKGQS-----AMRGGNKERLSMLTCLCWMYLWKSKEAPRHRPDNLE 139

Query: 61  -------KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL-------------AKGEVE 100
                  KE+   +AT   N ASRI+   P  ++ +G L L             A G ++
Sbjct: 140 DGDEIKTKEDWLKMATSNLNDASRINPSFPPLFLARGVLQLLRASTRPFPKNNTAPGALD 199

Query: 101 Q--------ASSAFKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
                    A  +F+  ++A    N+ A+LG+A   F+ G+Y+++LE Y+ AL+  P   
Sbjct: 200 PEKAELLRGAQKSFEDAIKASHGRNMLAVLGKARAAFSMGKYAEALEGYQEALRSMPDLV 259

Query: 152 GA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANEAAG---- 204
               R+GIG C ++LG    A+ A++R+L+++P++  A + LA   +D  A+        
Sbjct: 260 DPDPRIGIGCCFWQLGFKEDAKAAWERSLEINPDSKVANILLAQFYLDQSAHVPTNSPEF 319

Query: 205 ---IRKGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
               +K M E  QR++++     +     A +F        VE L + A+  T+     S
Sbjct: 320 IQLYKKAMTEYTQRSYKVDKDMPLTCATFAGYFLSRKSMPNVEALAQKAIQYTDVNAIAS 379

Query: 261 HSYYNLARSYHSKGDYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
             +Y LAR  H   +YEKA  YY  A          ++   +G  Q+ +  GDF  A   
Sbjct: 380 DGWYLLARKEHFDDNYEKALDYYGRADDARGGIDRGYMPAKFGAAQLSVLKGDFGEAKLR 439

Query: 320 FEKVLEIYPDNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAA 358
            EK+++    N E +  LG +Y +                     +G +E  +   +   
Sbjct: 440 LEKIIQ-QSKNIEAMILLGTLYAEEVFSSQESGVKEDKTTEFKKAIGYLENVRTAWKDPK 498

Query: 359 KIDPRDAQAFIDLGELL-----------------ISSDTGAALD---------AFKTART 392
           K    DA   ++L  L                  I  D   A D         A+K+A  
Sbjct: 499 KNLVPDASVLLNLARLYETEQPEKSLQCLQQVEQIEFDQIPAADRPEETDDEAAYKSAMR 558

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                 E +  ++LNNIG  +++  +++ A + F+ AL
Sbjct: 559 ------ENLSPQLLNNIGCFYYQSEKYDQAREMFQSAL 590


>gi|254579651|ref|XP_002495811.1| ZYRO0C03564p [Zygosaccharomyces rouxii]
 gi|238938702|emb|CAR26878.1| ZYRO0C03564p [Zygosaccharomyces rouxii]
          Length = 1096

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 230/1010 (22%), Positives = 405/1010 (40%), Gaps = 199/1010 (19%)

Query: 114  RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
            + N   LL +A + + +  Y  SL  ++  L ++P      R+GIG+C ++L     A  
Sbjct: 179  KPNSMFLLLRAKLLYQKKNYMASLRAFQELLVINPVMYPDPRIGIGMCFWQLKDYKLAIA 238

Query: 174  AFQRALQLDPENVEALVALAVMDLQANEAAG---------IRKGMEKMQRAFEIYPYCAM 224
            A++RAL+L+P N  A V + + +   +  A            K ++ +           +
Sbjct: 239  AWKRALELNPVNNNAAVLVTLGNFHNSLTASENDESFRENYSKALQDLDGLLRKDGQNPV 298

Query: 225  ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK---SHSYYNLARSYHSKGDYEKAGL 281
                L ++F+F G    V ++ E  ++      +    S S +   R++++  DY KA  
Sbjct: 299  LWTLLQSYFYFKGDFTKVIEVYENKISKFGFAISDTVLSESIFWCGRAHYALQDYRKAFS 358

Query: 282  YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
             +   +K   +  + +   +G GQ Q+K      ++  FE + + +    E    LG +Y
Sbjct: 359  MFQQCLK---RNEDNLLAKFGFGQTQMKNKLMEESILTFENIYKNHEGIQELNYILGLLY 415

Query: 342  VQLGQ------------------IEKAQELLRKAAKI-DPRDAQAFIDLGELLISSDTGA 382
               G+                  +EK+ + L K  +I + +  Q  I    L IS +   
Sbjct: 416  A--GKCLDPANSKNLPRKEFEKFVEKSIQYLEKYIRITNAKKNQVVIPRAYLAIS-ELYE 472

Query: 383  ALDAFKTARTLLKKA--------GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
            A +  K +   L KA        G+  PIE+LNN+G  HF  G+ E A   F     D +
Sbjct: 473  AQNQHKQSLEYLSKALQQVQEVEGDTAPIEILNNLGCFHFINGDMEKAKYFF-----DSV 527

Query: 435  WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 494
                   KT+T                     E D N        VT+ +N AR+LE  +
Sbjct: 528  -------KTRT---------------------EKDFN--------VTIYYNFARVLEAEN 551

Query: 495  DTVAASVLYRLILFKYQDYVDAYLR---LAAIAKARNNLQLSIE--LVNEA--LKVNGKY 547
               + SV Y  I+ K+  Y+ A +R      I    +NL+  ++  L N A  L+V   Y
Sbjct: 552  AEESKSV-YDQIISKHPGYLSARMRRLFFRVIENDNSNLKEDMDRLLSNNASDLEVRSFY 610

Query: 548  PNALSMLGDLELKNDDWVKA--KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR-- 603
               L        K+D+   A  KET        +  D YA  SL N  Y    R  KR  
Sbjct: 611  SWFLKNNHTDPKKSDNLETAHNKETLVK----YNSHDFYALTSLANL-YLMIGREAKRGH 665

Query: 604  APKLEATHLE---KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
            +PK +    +   KA +L+ +V+     +++AA G  +V AE  +F  + ++  + +++ 
Sbjct: 666  SPKDQDNSKQSFLKAVQLFQKVLQLDPFSIFAAQGIAIVFAESKRFGPALEILRKARDSL 725

Query: 661  SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD-AQILLYLARTHY--- 716
                     DV +N+AH       +A A+++Y+  L+KF    +  ++L  L R  Y   
Sbjct: 726  DNE------DVHVNMAHCLLEMHEYAKAIELYEFSLKKFGNEENRPKLLNLLGRAWYARA 779

Query: 717  ----EAEQWQ----DCKKSL----LRAIHLAPSNYTLRFDAGVAMQKFS-ASTLQKTR-- 761
                  E +Q    + +K+L     R+  +    +       VA+  F  A TL+++   
Sbjct: 780  TRERSLEFFQFALNNSEKALEAETARSSSVKNDKFLASLKYNVALLHFQVAETLRRSNPK 839

Query: 762  -RTADEVRSTVAELENAVRVFSHLSAASNLHLHGF---DEKKINTHVEYCKHLLDAAKIH 817
             RT   ++   A L+  +++   L       L GF    ++++   ++  +  + +A + 
Sbjct: 840  GRTLSTIQLAQAGLDTGLQILKELKG-----LEGFVIIPKEELEQRIQLGETTMKSA-LE 893

Query: 818  REAAEREEQQNRQRQEAARQAALAEE---------------ARRKAEEQKKYLLEKRKLE 862
            R   E+E  +N Q ++  +   L EE               +R K E QK+   E R+L+
Sbjct: 894  RCVKEQEAYENEQVEKFEQAKKLMEENEQREQEKKRQEEEASRIKLERQKE---EYRRLQ 950

Query: 863  DEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVG-----HSEKRRRKGGKRRK 917
            DE +++ Q+ E  + + E     +  S   E    D ++       +S  R+ K    RK
Sbjct: 951  DEAQKIIQEREEREAISEAQLEKSDLSDANEEGGEDKEKKSKKKRKNSTTRKSKQPTERK 1010

Query: 918  KDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAG 977
            + K S                 +EP  E +         Q  +Q+  V +  N    +  
Sbjct: 1011 RRKKS-----------------QEPSQETS---------QEANQEQAVSDGENGPAPSPP 1044

Query: 978  LEDSDVDDEMAPSITAAR----RRRALSE-----SDDDEPFERQLRDNTD 1018
             E  D  DE        +    +++ALSE     SD++E  +    DN D
Sbjct: 1045 KEHKDEQDEDEDDDVVHKSSRNKKQALSEEFIEDSDEEEAKQTGGSDNED 1094


>gi|366992047|ref|XP_003675789.1| hypothetical protein NCAS_0C04350 [Naumovozyma castellii CBS 4309]
 gi|342301654|emb|CCC69425.1| hypothetical protein NCAS_0C04350 [Naumovozyma castellii CBS 4309]
          Length = 1087

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 202/864 (23%), Positives = 327/864 (37%), Gaps = 204/864 (23%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEA------------DRDNVPALLGQACVEFNRGR 132
           TW+G    +LA  ++     A+   LE              + NV  LL +A + F +  
Sbjct: 146 TWIGN---MLATVDLYYQRGAYDKALETCDLFVKGVQQDTKKHNVMFLLLRAKLLFRKKN 202

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
           Y  SL+ ++  L  +P      R+GIG C + L     A ++++RA QLD          
Sbjct: 203 YVASLKLFQELLVSNPVLKPDPRIGIGACFWHLKDYKMAIKSWERATQLD---------- 252

Query: 193 AVMDLQANEAAGIRKGMEKMQRAF----------EIYPYCAMALNYL---ANH------- 232
                 AN +A I   + K   +           E Y    M LN L    NH       
Sbjct: 253 ------ANSSASILCLLGKFHNSLTESENDTQFKENYTASLMDLNTLYNDTNHPENKENP 306

Query: 233 --FFFTGQHFLVEQLTETALAVTNHG--PTK--------SHSYYNLARSYHSKGDYEKAG 280
                   +F  +   E  L + +    P          S S     R+Y++  DY KA 
Sbjct: 307 VLLTLLQSYFYYKNDFENVLKIYDEKIKPISTLVADSILSESTLWCGRAYYALDDYRKAF 366

Query: 281 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
             +  S+K      E +    GLGQ QLK      ++  FE + + +    E    LG +
Sbjct: 367 AMFQESLK---TNEENLLAKLGLGQAQLKTNLLEESILTFENLYKSHAGIQELNYILGML 423

Query: 341 YV-----QLGQIE-------------------KAQELLRKAAKIDPRDAQAFIDLGELLI 376
           Y        GQ                     KA + L K  K+        +     L 
Sbjct: 424 YAGKCFAAAGQNHESTSTTTTMSGKEISILNAKALQFLEKYIKLTTAKKNQLVIPRAYLT 483

Query: 377 SSDTGAALDAFKTARTLLKKAGEE--------VPIEVLNNIGVIHFEKGEFESAHQSFKD 428
            S      + +K +   L KA EE        VP+E+LNNIG  +F  G+ + A + F  
Sbjct: 484 ISQLYEKTNQYKQSLDYLTKALEEIQFINKDNVPLELLNNIGSFYFINGDADKAKEYF-- 541

Query: 429 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 488
                               D + S           +  ND + +       T+ +N+AR
Sbjct: 542 --------------------DLAKS-----------KLSNDSSSL------TTINYNIAR 564

Query: 489 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 548
            LE   D   + VLY+ IL ++ +Y+ A +R         N  +  E+ N A K+N    
Sbjct: 565 TLE-TKDLEKSQVLYQDILNEHPNYIAAKIRTLFFKFVNGNESIKDEMTNLA-KMNDSDL 622

Query: 549 NALSM----LGDLELKNDDWVKAKETFRAASDAT--DGKDSYATLSLGNWNYFAA----- 597
              S     L +  LKN+   K KET          D  D YA +SLGN     A     
Sbjct: 623 EVRSFYAWYLKNTTLKNE---KEKETSYNKDTLVKYDSHDLYALISLGNLYCLIAREGRK 679

Query: 598 -LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQV 656
            +++ K   K + ++L KA +L+ +V+     N++AA G  ++ AE  +   + ++  +V
Sbjct: 680 NVKSLKEQEKSKHSYL-KAIQLFQKVLQIDPFNVFAAQGIAIIFAESKRLGAAVEILRKV 738

Query: 657 QEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTH 715
           +++          DV INLA+       F+ A++ Y   L+KF      + IL  L +  
Sbjct: 739 RDSLDNE------DVHINLANCLLEMREFSKAIENYDLILKKFPNIKNKSHILNLLGKAW 792

Query: 716 Y-----------------------EAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 752
           Y                       E E+ +D  K   R I +      L+F+  VA+  F
Sbjct: 793 YARGLKEKNIDYFFKALSYTEMAIEFEENRDTSKKNERFIAI------LKFN--VAILDF 844

Query: 753 S-ASTLQKTR---RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD--EKKINTHVEY 806
             A TL+++    RT + +++ V  L+ A+ +   L    + ++   D  E++I      
Sbjct: 845 QIAETLRRSEKKDRTLEHLKTAVVGLDKAIVILKELKDLKDFNVILKDELEQRIQLGETT 904

Query: 807 CKHLLDAAKIHREAAEREEQQNRQ 830
            K +L+     R   E+E+ +N Q
Sbjct: 905 MKTVLE-----RCVTEQEQYENEQ 923


>gi|410075705|ref|XP_003955435.1| hypothetical protein KAFR_0A08660 [Kazachstania africana CBS 2517]
 gi|372462017|emb|CCF56300.1| hypothetical protein KAFR_0A08660 [Kazachstania africana CBS 2517]
          Length = 1095

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 162/720 (22%), Positives = 293/720 (40%), Gaps = 153/720 (21%)

Query: 85  TWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQACVEFN 129
           TWVG      +L   KG  ++A   S  F   ++A+        + N   LL +A + + 
Sbjct: 139 TWVGNMLATVELYYQKGHYDKALETSDLFMKSIQAEDRRTGKQSKLNCLFLLMRAKLLYQ 198

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA- 188
           +  Y+ SL+ ++  L  +P      R+GIGLC + L     A ++++R+L+++ +N  A 
Sbjct: 199 KKNYTASLKLFQELLVSNPVLRPDSRIGIGLCFWHLKDYNMAIKSWERSLEINNKNNVAS 258

Query: 189 -LVAL-----AVMDLQANE--AAGIRKGMEKMQRAFEIYPYC---AMALNYLANHFFFTG 237
            LV L     ++ + + +E       K +  +   F    +       L  L ++++F  
Sbjct: 259 ILVILGNYHKSLTNSENDEQFKENFTKTLTDLNSLFVDGSHNKENPALLTLLQSYYYFKA 318

Query: 238 QHFLVEQLTETALAVTNHGPTKS--------HSYYNLARSYHSKGDYEKAGLYYMASVKE 289
            +  V  +  T +     GP KS         S +   R+Y++  DY +A  ++  S+K 
Sbjct: 319 DYQKVVDIFNTKI-----GPKKSSTIDSILSESTFWTGRAYYALNDYRRAFSFFQESLK- 372

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV------- 342
             K  + +   +G+GQ Q+K      ++  FE + +   +  E    LG +Y        
Sbjct: 373 --KNEDNLLARFGVGQSQIKTNLVEESILTFENLYKTNENIQELNYVLGLLYSAKCLNHD 430

Query: 343 -------------------QLGQIEKAQELLRKAAKID-PRDAQAFIDLGELLIS----- 377
                              Q   I K+ + L K  K+   +  Q  +    L+IS     
Sbjct: 431 NATSSSIPNDTDNYISGKEQQKLINKSIQYLEKYIKLTKAKKNQLVVPRAYLVISQLYEL 490

Query: 378 -SDTGAALDAFKTARTLLKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 435
            ++   +L+    A + +    E+ V +EVLNN+   +F   +FE A++ FK A   G  
Sbjct: 491 QNNYKQSLEYLTDAMSEITFVNEKNVSLEVLNNLACFYFINNDFEKANEYFKKAQERG-- 548

Query: 436 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 495
                                           ND +       K+T+ FN+AR +E I D
Sbjct: 549 -------------------------------SNDESL------KITLDFNIARTMESIGD 571

Query: 496 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
              +  +Y  I  K+  Y+ A +R        +N    I++ ++ LK+  +        G
Sbjct: 572 INKSRSIYEDISTKHPHYLSAKIRDLYTKFVNDN----IDIEDDMLKLQNENK------G 621

Query: 556 DLELKND-DWVKAKETFRAASDATD----------GKDSYATLSLGNWNYFAALRNEKRA 604
           +LE +    W    +  + AS  TD            D YA +SL N  Y    ++ K+ 
Sbjct: 622 NLECRAFYSWYLKNQADKDASKETDHNKDTLVKYDSHDLYALISLANL-YCTIAKDAKKH 680

Query: 605 P------KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
           P      K + ++L KA +LY +V+     N++AA G  +V AE  +   + ++F +V++
Sbjct: 681 PNPKEQEKSKHSYL-KAIQLYQKVLQVDPLNVFAAQGIAIVFAESKRLGAALEIFRKVRD 739

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD--AQILLYLARTHY 716
           +      +   DV IN  +      ++  A++ Y+  L KF    D  A +L  L +  Y
Sbjct: 740 S------INNFDVHINCGNSLLEMHDYPKAIETYEFVLNKFNNTRDKKAYLLNLLGKAWY 793


>gi|343960142|dbj|BAK63925.1| RNA polymerase-associated protein CTR9 homolog [Pan troglodytes]
          Length = 471

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 102/178 (57%), Gaps = 11/178 (6%)

Query: 691 MYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 750
           MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q
Sbjct: 1   MYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQ 60

Query: 751 KFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHL 810
           + + S L+  +    EV + V ELE A R FS+LS   +     FD     T    C  L
Sbjct: 61  RLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDL 118

Query: 811 LDAAKIHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
           L  A+ H   A +++++ R       Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 119 LSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 176


>gi|407410530|gb|EKF32930.1| hypothetical protein MOQ_003209 [Trypanosoma cruzi marinkellei]
          Length = 912

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 248/597 (41%), Gaps = 62/597 (10%)

Query: 80  MHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           +H P     +G   +A G  ++ A   F+  + ADR  V A LG A V ++  RY     
Sbjct: 79  LHRPVLLYLEGLAAMASGTSLQTARVKFEEAIRADRHFVLARLGLAAVSYHMKRYKKCFS 138

Query: 139 FYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            Y+  L+ +  SCP  +R+G+GLC Y L  L  A++  +RAL+++ ++  AL AL V+ L
Sbjct: 139 HYRVVLETLGSSCPPIVRVGMGLCAYHLNHLDYAQRCLERALEVNEDDELALFALLVVFL 198

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +   I K +E  QR   I P  A  L  +A   +F               AVT    
Sbjct: 199 DRRQ---IPKVIEVAQRLRGILPENATVLLKVAELVYFR--------------AVTQE-- 239

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
            +  +  N  R               +A V+ +    E     Y  G++ L LGD  +A 
Sbjct: 240 -RVKASANPIRR-------------LLAEVRRVATVEESAAADYQEGRLCLALGDLSNAR 285

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
              E  +++ P+            +  G+  +A++LL +  K  P   +    L   + +
Sbjct: 286 LLLESAMQVLPNLLAARIHYARFLLLSGRETEAEQLLLRINKDHPNHKEVLQLLA--VYA 343

Query: 378 SDTGAALDAFKTARTLLKKAGEEVPIEVLN-NIG--VIHFEKGE---FESAHQSFKDALG 431
           S  G    A + +R L +      P ++ + +I       +KGE     S     +  +G
Sbjct: 344 SRHGLHEKALEYSRRLTEIVA---PGDIRSWSIASWCARLDKGESKKLMSHLARIRKEVG 400

Query: 432 DGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
           + + + L+        +      LQ   D +L   F  + N   LP   V ++FNLA LL
Sbjct: 401 EPVSMELM---ANIAALGGDTEALQRIIDCELGADFLGEPN---LPVVYVPLVFNLALLL 454

Query: 491 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
           E+  D   A  LY  ++ ++  +   Y+RL  +AK    L+ ++  +    +V  + P +
Sbjct: 455 EET-DRTRARQLYIFLVKQHGYFRPPYIRLHVLAKDDGFLKQAVAWLVLLQQVLPEDPTS 513

Query: 551 LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 610
           L+ +G++  +      A    R+A     G+     L+ G    + + ++ K   +    
Sbjct: 514 LASIGEILFEKSRVGAAMTALRSAR----GRPLPVALAFGAAFLWCSQQHGKDNRRF--- 566

Query: 611 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 667
            L  AK+ +  V+ +   N+ AA+G    L  +  +D  + L  +V E      +V+
Sbjct: 567 -LASAKDRFAFVLRRDNGNVLAAHGLACCLGLEADYDRCQCLLDRVGEVRPNCSYVR 622


>gi|118376183|ref|XP_001021274.1| SLEI family protein [Tetrahymena thermophila]
 gi|89303041|gb|EAS01029.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2889

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 160/330 (48%), Gaps = 14/330 (4%)

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
           +A   +K  +E D +   A    A +  N+  + DS + Y+RA+++ P    A    IGL
Sbjct: 231 EAIKYYKKAIEIDPNYYNAQFNLALIYQNQNNFDDSFQCYRRAIEIDPKQVDAYN-NIGL 289

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
             Y  G + +A +++++AL++DP+  +A    A   L   +   I + ++  ++  EI P
Sbjct: 290 IYYYKGMIKEALESYKKALEIDPKYYKAYHNSA---LAYEKEKLIDEAIQCYKKTIEINP 346

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 280
               +L  L +       + L+++  E    +    P     +Y+LA  Y+ K    +A 
Sbjct: 347 SFLKSLTRLGD---ICIDNNLLDEGIECFKKIIQLDPQSYFDHYSLADLYYKKNMLVEAI 403

Query: 281 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
            +Y  ++ EIN P +     Y LG    K G+   AL  ++K +++ P++ E     G  
Sbjct: 404 NHYKITL-EIN-PQQLSAHLY-LGISYKKQGNLEEALQCYKKAIQLNPNSQEAHFNSGIA 460

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 400
           Y  LG +++A E  +KA +I+P+   A I+LG L   ++     DA K  +TLL    EE
Sbjct: 461 YSHLGNVKEALECYKKALEINPKFVSALINLGALY--TNQKIYEDAIKCYQTLL--TIEE 516

Query: 401 VPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             ++ LNN+G I+ +K  F+ A   FK  +
Sbjct: 517 NNLDGLNNLGYIYSQKNMFDEAINYFKKVI 546



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 146/623 (23%), Positives = 265/623 (42%), Gaps = 117/623 (18%)

Query: 76  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 135
           ++IDM +      +G     +  +++A   FK VLE D +N  AL   A    ++    +
Sbjct: 2   NQIDMVDSQVLFKQGIDFQKQNMLDEAVECFKKVLEIDANNTEALYNLALTYQSKKLIDE 61

Query: 136 SLEFYKRALQVHPSCPGAI--RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
           SL +  + L ++PS   A   + GI L   +   L  A    ++ L++DP N  A   L 
Sbjct: 62  SLVYLNKVLDLNPSHVNAYISKAGIYL---EQKILDFAISCLKKVLEIDPYNANAHERLG 118

Query: 194 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
                 N    I + ++  ++A EI P C  A + L     + G+  L++Q  +  L   
Sbjct: 119 FTYKAQN---LIDQAIKCYKKAIEIDPNCTEAYHNLG--IVYEGKG-LIQQAYQCYLKAQ 172

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
           +  P  + SY +LAR+Y+   D+                            Q+Q      
Sbjct: 173 SIDPKYTKSYISLARNYYL--DF----------------------------QIQ------ 196

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
             A+ + +K +EI P++ E  + LG +Y       +A +  +KA +IDP    A  +L  
Sbjct: 197 -DAIKSLKKAIEIEPNSVEAYERLGFVYQNEKNNSEAIKYYKKAIEIDPNYYNAQFNLA- 254

Query: 374 LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-D 432
            LI  +     D+F+  R  ++   ++V  +  NNIG+I++ KG  + A +S+K AL  D
Sbjct: 255 -LIYQNQNNFDDSFQCYRRAIEIDPKQV--DAYNNIGLIYYYKGMIKEALESYKKALEID 311

Query: 433 GIWL-------------TLLDSKTKTY--VIDASASMLQ----FKDMQLFHRFENDGNHV 473
             +               L+D   + Y   I+ + S L+      D+ + +   ++G  +
Sbjct: 312 PKYYKAYHNSALAYEKEKLIDEAIQCYKKTIEINPSFLKSLTRLGDICIDNNLLDEG--I 369

Query: 474 ELPWNKVTVL--------FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 525
           E  + K+  L        ++LA L  + +  V A   Y++ L      + A+L L    K
Sbjct: 370 EC-FKKIIQLDPQSYFDHYSLADLYYKKNMLVEAINHYKITLEINPQQLSAHLYLGISYK 428

Query: 526 ARNNLQLSIELVNEALKVNGKYPN----------ALSMLGDLELKNDDWVKAKETFRAAS 575
            + NL+ +++   +A+++N   PN          A S LG+++       +A E ++ A 
Sbjct: 429 KQGNLEEALQCYKKAIQLN---PNSQEAHFNSGIAYSHLGNVK-------EALECYKKAL 478

Query: 576 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 635
           +  + K   A ++LG     A   N+K          E A + Y  ++    +NL   N 
Sbjct: 479 E-INPKFVSALINLG-----ALYTNQKI--------YEDAIKCYQTLLTIEENNLDGLNN 524

Query: 636 AGVVLAEKGQFDVSKDLFTQVQE 658
            G + ++K  FD + + F +V E
Sbjct: 525 LGYIYSQKNMFDEAINYFKKVIE 547



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 138/653 (21%), Positives = 280/653 (42%), Gaps = 103/653 (15%)

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           L   K  + +A + +KI LE +   + A L        +G   ++L+ YK+A+Q++P+  
Sbjct: 392 LYYKKNMLVEAINHYKITLEINPQQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPNSQ 451

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
            A     G+    LG + +A + +++AL+++P+ V AL+ L  +           K  + 
Sbjct: 452 EA-HFNSGIAYSHLGNVKEALECYKKALEINPKFVSALINLGALYTNQKIYEDAIKCYQT 510

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
           +    E        L+ L N  +   Q  + ++       V    PT   SYYN+  +Y 
Sbjct: 511 LLTIEE------NNLDGLNNLGYIYSQKNMFDEAINYFKKVIEIDPTYYLSYYNIGVAYE 564

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFP-----------------------------YYG 302
           SK   ++A  YY   V+E++  +  +F                               Y 
Sbjct: 565 SKQMLDEALEYY-NKVEEMSPKYFIVFVRQGNVYSQKNMQNEAFQCYNKVSEQILKNIYS 623

Query: 303 LGQ-VQLKLGDF-RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           L + +++    F + ++ N+E  +++ P   +   +LG ++  + Q+E+A    + A ++
Sbjct: 624 LSEELEISRASFVQESIKNYEDAVKLNPKYIQFYHSLGLLHSNINQMEEAMRYFQAAIEL 683

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE--EVPIEVLNNIGVIHFEKGE 418
           DP+   ++++LG +     +G A+  +  A+  L+KA E  +     LNN G+ +F +  
Sbjct: 684 DPKYINSYLELGNIY----SGKAI--YDKAQQCLEKALEIDQNSASALNNFGLFYFTQKM 737

Query: 419 FESAHQSFKDALGD------GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 472
            + A +SFK AL         I+ + L  ++K  +ID +     +K++ L +  +     
Sbjct: 738 DDKALESFKKALEINPNYELAIYNSGLVYESKN-LIDKALEC--YKNVLLINPTDKKA-- 792

Query: 473 VELPWNKVTVL--------FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
                +K+  L         NL  +L+  +  + ++  +      YQ     Y++    A
Sbjct: 793 ----LSKIDQLNQKDGKNNVNLEEILQDANKNLKSAKDF------YQQGFVYYIQRKD-A 841

Query: 525 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 584
           K+   L+ +IEL       + KY +A   LG L  +     +A E+++ A +      S 
Sbjct: 842 KSIECLKKAIEL-------DPKYFDAYDKLGLLYKEKKMISQAIESYKKAFEINPKYYSA 894

Query: 585 ATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 644
             + +G       L  EK+        +++AK+ + +VI  + ++  A    G    E  
Sbjct: 895 IGIIMG-------LYKEKKM-------MDEAKQFHKKVIEDNQNSTQALAQIGEAYQENK 940

Query: 645 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
            FD + D + ++ E    +V     DV+I + ++Y  +     A++ ++N L+
Sbjct: 941 MFDEAIDCYQKITELEPFNV-----DVYIEIGNIYLDKQMNDQALECFENVLQ 988



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 171/395 (43%), Gaps = 44/395 (11%)

Query: 48   YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
            Y  +G I  +Q   +E    A   Y KA   D    S ++  G   L K + +QA   +K
Sbjct: 1996 YYEMGIIYQRQNMIDE----AISNYQKAIEQDPKYKSAYIQLGNSYLDKVQYDQAIECYK 2051

Query: 108  IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
              LE D ++V A      + +N+ +   +LE+Y +A++++P     I    GL   K+  
Sbjct: 2052 KALEIDPNDVIAYNNIGLIYYNQEKIDLALEYYNKAIEINPKYELPI-YNSGLIYEKMKL 2110

Query: 168  LGKARQAFQRALQLDPENVEALVALAVM-DLQANEAAGIRKGMEK--MQRAFEIYPYCAM 224
              KA + + + L+++P   ++L    ++ D    +   +   + K  +Q +         
Sbjct: 2111 KEKALECYNKVLEINPTEQKSLKRKKILEDKTQKDEFNLLNELNKNIIQNS--------- 2161

Query: 225  ALNYLANHFFFTGQHFLVE-------QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
              N  A  FF  G    ++       Q  + A+ +    P    +Y  L   Y SK  ++
Sbjct: 2162 --NSKAEEFFQKGFLHYIQGKDDESIQCLQQAIEI---DPNFYEAYGKLGFIYQSKKMFD 2216

Query: 278  KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
            +A   Y  +++   K  E I       +  +++   R+ L   ++     P N ET   +
Sbjct: 2217 EAIENYKKAIQLSPKSLESI-------RNIVEIYHNRNMLNEVKEFFNSIPKNTETYYNI 2269

Query: 338  GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 397
            G+++     I++A +  +K  +++P+   A+I+LG   ++         ++ A     K 
Sbjct: 2270 GNVFADKYMIDEAIDYYQKTIQLNPQHINAYIELGNTYLNKIQ------YEKALECYNKI 2323

Query: 398  GEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
             E  P + +  NNIG++HF++ +++ A Q +  AL
Sbjct: 2324 VEINPKQAVAYNNIGLVHFKQNKYDEAIQFYNKAL 2358



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 149/327 (45%), Gaps = 17/327 (5%)

Query: 71  YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 130
           Y NK   ++    + ++ K  + L +  ++ A S  K VLE D  N  A          +
Sbjct: 65  YLNKVLDLNPSHVNAYISKAGIYLEQKILDFAISCLKKVLEIDPYNANAHERLGFTYKAQ 124

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
                +++ YK+A+++ P+C  A    +G+     G + +A Q + +A  +DP+  ++ +
Sbjct: 125 NLIDQAIKCYKKAIEIDPNCTEAYH-NLGIVYEGKGLIQQAYQCYLKAQSIDPKYTKSYI 183

Query: 191 ALA---VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           +LA    +D Q      I+  ++ +++A EI P    A   L   F +  +    E +  
Sbjct: 184 SLARNYYLDFQ------IQDAIKSLKKAIEIEPNSVEAYERLG--FVYQNEKNNSEAIKY 235

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
              A+    P   ++ +NLA  Y ++ +++ +   Y  ++ EI+ P + +  Y  +G + 
Sbjct: 236 YKKAIE-IDPNYYNAQFNLALIYQNQNNFDDSFQCYRRAI-EID-PKQ-VDAYNNIGLIY 291

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
              G  + AL +++K LEI P   +        Y +   I++A +  +K  +I+P   ++
Sbjct: 292 YYKGMIKEALESYKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQCYKKTIEINPSFLKS 351

Query: 368 FIDLGELLISSD-TGAALDAFKTARTL 393
              LG++ I ++     ++ FK    L
Sbjct: 352 LTRLGDICIDNNLLDEGIECFKKIIQL 378



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 140/327 (42%), Gaps = 19/327 (5%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   ++KA  ++    + ++  G + L + + E+A   ++  +E D   V A      V 
Sbjct: 2553 AITCFSKAIELNPKYANAYIKLGNIYLKQIKYEKARECYEKAIEIDPKQVVAYNNIGLVY 2612

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            +N      +L +Y++ALQ++P    ++    GL      Q  KA + + +AL++DP +V+
Sbjct: 2613 YNLKNDDLALSYYQKALQINPRYILSL-YNSGLAYEMKNQNQKALEFYNKALEVDPNDVK 2671

Query: 188  ALVALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
             L  +  + L+     GI    ++ +   F       + +   A  ++  G  +  +++ 
Sbjct: 2672 TLTRMTQLLLKT---GGIDEPDVDNLLSDF------GINVQKSAIDYYKQGYSYYTKKMK 2722

Query: 247  ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
            + ++   N      P    +Y  LA  Y  K   +KA   Y    K I K   FI  Y  
Sbjct: 2723 DQSIKCLNKAIEMDPNFFEAYDKLALIYEEKKMLDKAIENYR---KAIEKNPNFINGYNK 2779

Query: 303  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            LG + L+   F  A+  ++K LEI P+           Y +     +A    +KA  IDP
Sbjct: 2780 LGNIYLEKKMFDDAIVCYQKCLEIDPNYYYGYYNQAIAYEEKQLDSQAIYCYKKAINIDP 2839

Query: 363  RDAQAFIDLGELLISSDTGA-ALDAFK 388
                A+I+LG +    +  + +L  FK
Sbjct: 2840 TGINAYINLGMIYQDQEKASKSLSCFK 2866



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 175/426 (41%), Gaps = 68/426 (15%)

Query: 35   YERIAILNA-LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 93
            Y +I  +N    V Y  +G +  KQ + +E    A Q+YNKA  +D +   ++   G + 
Sbjct: 2320 YNKIVEINPKQAVAYNNIGLVHFKQNKYDE----AIQFYNKALEVDPNYDLSYYNSGLVY 2375

Query: 94   LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
              K   ++A   +  VL+ + ++   L     +  N+ +  + +E   +A ++  S    
Sbjct: 2376 ETKKMNDKALECYNKVLKINPNDKKTLTRIQKINENKDKNLEEIEIDLKADKIPQSAKDY 2435

Query: 154  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEK 211
               G      K+  L  +    ++A++++P   EA   + L     Q  E A     ++ 
Sbjct: 2436 FIQGSTYFIKKIKDL--SIDCLKKAIEIEPNYSEAYDKLGLVYQYYQMYEDA-----IQN 2488

Query: 212  MQRAFEIYPYC------AMALNYLANHFFFTGQHF---LVEQ------------------ 244
             Q+AFE  P C       MA+ YL     F  + F   ++E+                  
Sbjct: 2489 FQKAFETNPKCYDAVLSLMAI-YLEKKTLFEAKEFHNQIIEKNPDVPELHHKIGVAYQEK 2547

Query: 245  -LTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
             + + A+   +      P  +++Y  L   Y  +  YEKA   Y  ++ EI+ P + +  
Sbjct: 2548 SMFDEAITCFSKAIELNPKYANAYIKLGNIYLKQIKYEKARECYEKAI-EID-PKQVV-A 2604

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
            Y  +G V   L +   AL+ ++K L+I P    +L   G  Y    Q +KA E   KA +
Sbjct: 2605 YNNIGLVYYNLKNDDLALSYYQKALQINPRYILSLYNSGLAYEMKNQNQKALEFYNKALE 2664

Query: 360  IDPRDAQAFIDLGELLIS-------------SDTG-----AALDAFKTARTLLKKAGEEV 401
            +DP D +    + +LL+              SD G     +A+D +K   +   K  ++ 
Sbjct: 2665 VDPNDVKTLTRMTQLLLKTGGIDEPDVDNLLSDFGINVQKSAIDYYKQGYSYYTKKMKDQ 2724

Query: 402  PIEVLN 407
             I+ LN
Sbjct: 2725 SIKCLN 2730



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 108/510 (21%), Positives = 215/510 (42%), Gaps = 34/510 (6%)

Query: 70  QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 129
           Q Y +A  ID  +   +   G +   KG +++A  ++K  LE D     A    A     
Sbjct: 268 QCYRRAIEIDPKQVDAYNNIGLIYYYKGMIKEALESYKKALEIDPKYYKAYHNSALAYEK 327

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
                ++++ YK+ ++++PS   ++ RLG  +C      L +  + F++ +QLDP++   
Sbjct: 328 EKLIDEAIQCYKKTIEINPSFLKSLTRLG-DICI-DNNLLDEGIECFKKIIQLDPQSYFD 385

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
             +LA +  + N    + + +   +   EI P    A  YL   +   G    +E+  + 
Sbjct: 386 HYSLADLYYKKN---MLVEAINHYKITLEINPQQLSAHLYLGISYKKQGN---LEEALQC 439

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
                   P    +++N   +Y   G+ ++A   Y  ++ EIN   +F+     LG +  
Sbjct: 440 YKKAIQLNPNSQEAHFNSGIAYSHLGNVKEALECYKKAL-EINP--KFVSALINLGALYT 496

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
               +  A+  ++ +L I  +N + L  LG+IY Q    ++A    +K  +IDP    ++
Sbjct: 497 NQKIYEDAIKCYQTLLTIEENNLDGLNNLGYIYSQKNMFDEAINYFKKVIEIDPTYYLSY 556

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 426
            ++G   ++ ++   LD    A     K  E  P    V    G ++ +K     A Q +
Sbjct: 557 YNIG---VAYESKQMLD---EALEYYNKVEEMSPKYFIVFVRQGNVYSQKNMQNEAFQCY 610

Query: 427 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 486
            + + + I   +     +  +  + AS +Q          +N  + V+L    +    +L
Sbjct: 611 -NKVSEQILKNIYSLSEELEI--SRASFVQ-------ESIKNYEDAVKLNPKYIQFYHSL 660

Query: 487 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 546
             L   I+    A   ++  +     Y+++YL L  I   +     + + + +AL+++  
Sbjct: 661 GLLHSNINQMEEAMRYFQAAIELDPKYINSYLELGNIYSGKAIYDKAQQCLEKALEIDQN 720

Query: 547 YPNALSMLGDLEL--KNDDWVKAKETFRAA 574
             +AL+  G      K DD  KA E+F+ A
Sbjct: 721 SASALNNFGLFYFTQKMDD--KALESFKKA 748



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 154/368 (41%), Gaps = 35/368 (9%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   Y K + ++      ++  G + L K   +QA   F+ VL+ +   + A      V 
Sbjct: 945  AIDCYQKITELEPFNVDVYIEIGNIYLDKQMNDQALECFENVLQINPQEIIAHNNIGLVY 1004

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + +  +  +LE Y  AL ++P    +I    GL      Q+ KA + + R LQL+P+   
Sbjct: 1005 YEKKMFDKALEHYNNALLINPDFQQSI-YNSGLAYESKNQIDKALECYNRVLQLNPDEER 1063

Query: 188  ALVALAVMDLQANEAAGIRKGME-KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            +L  +  + LQ        K +E K+ +A    P  A    Y   + +F  Q    EQ  
Sbjct: 1064 SLTRIKKISLQ-------NKILEKKIDKA----PSTAKEF-YQQGYLYF--QQLKDEQSI 1109

Query: 247  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
            +         P    +Y  L   Y  +  + +A L Y  ++ EIN P+        L  +
Sbjct: 1110 QCLKKAIELDPNYFEAYDKLGLVYKERKMFNEAVLNYKKAI-EIN-PN-------CLNAI 1160

Query: 307  QLKLGDF--RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
            +  +  +  R  L   ++  +  P N +T   L  +Y     ++++  + ++  +++ + 
Sbjct: 1161 KEVMNIYLDRKMLNEAKEFYDQVPKNLDTYYELAVVYQTQKMLDESIAIYKRIIELNSKY 1220

Query: 365  AQAFIDLGE-LLISSDTGAALDAF-KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
             +A+I LG   L       AL+++ K      KKA         NNIG+++F +G  + A
Sbjct: 1221 IKAYIQLGNAYLDKPQYDLALESYQKIIEIDPKKAV------AYNNIGLVYFRQGMNDEA 1274

Query: 423  HQSFKDAL 430
             + F  A+
Sbjct: 1275 LEYFTKAI 1282



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/398 (19%), Positives = 169/398 (42%), Gaps = 46/398 (11%)

Query: 47   YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 106
            +Y  LG + +   + EE    A +Y+  A  +D    ++++  G +   K   ++A    
Sbjct: 656  FYHSLGLLHSNINQMEE----AMRYFQAAIELDPKYINSYLELGNIYSGKAIYDKAQQCL 711

Query: 107  KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
            +  LE D+++  AL       F +     +LE +K+AL+++P+   AI    GL      
Sbjct: 712  EKALEIDQNSASALNNFGLFYFTQKMDDKALESFKKALEINPNYELAI-YNSGLVYESKN 770

Query: 167  QLGKARQAFQRALQLDPENVEALVALAVMDLQ-ANEAAGIRKGMEKMQRAFEIYPYCAMA 225
             + KA + ++  L ++P + +AL  +  ++ +       + + ++   +  +        
Sbjct: 771  LIDKALECYKNVLLINPTDKKALSKIDQLNQKDGKNNVNLEEILQDANKNLK-------- 822

Query: 226  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY-- 283
                A  F+  G  + +++    ++            Y++          Y+K GL Y  
Sbjct: 823  ---SAKDFYQQGFVYYIQRKDAKSIECLKKAIELDPKYFDA---------YDKLGLLYKE 870

Query: 284  --MAS--VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN----FEKVLEIYPDNCETLK 335
              M S  ++   K  E    YY    + + L   +  +       +KV+E   ++ + L 
Sbjct: 871  KKMISQAIESYKKAFEINPKYYSAIGIIMGLYKEKKMMDEAKQFHKKVIEDNQNSTQALA 930

Query: 336  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG-AALDAFKTARTLL 394
             +G  Y +    ++A +  +K  +++P +   +I++G + +       AL+ F+    + 
Sbjct: 931  QIGEAYQENKMFDEAIDCYQKITELEPFNVDVYIEIGNIYLDKQMNDQALECFENVLQI- 989

Query: 395  KKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
                   P E++  NNIG++++EK  F+ A + + +AL
Sbjct: 990  ------NPQEIIAHNNIGLVYYEKKMFDKALEHYNNAL 1021



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/337 (19%), Positives = 142/337 (42%), Gaps = 39/337 (11%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A + Y KA  ++    + ++  G   L K   ++A  ++K ++E D     A      V 
Sbjct: 1470 AVESYLKAIELNPKYINAFIQLGNAYLDKLLFDKAIESYKKIIEIDPSKAIAYNNIGLVY 1529

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            F +     +LE +++A++++P    ++    GL   +  Q  KA + +++ L+++P   +
Sbjct: 1530 FEQEMNDLALEQFQKAIEINPKYELSL-YNSGLVYERKDQNDKALECYRKVLEINPNEQK 1588

Query: 188  ALVALAVMDLQANEAAGIRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            +L  + ++  + N+    +  + K +Q+               A  +F  G  + +EQ  
Sbjct: 1589 SLSRIQIIKQKQNKTLNEKFDLLKVLQKKL------GKEFTSKAEEYFKQGFLYFMEQKY 1642

Query: 247  ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASV--------------- 287
            + ++          P    +Y  L   Y  K  +E+A +YY  ++               
Sbjct: 1643 DMSIECLKKAIEINPNYCDAYERLGFIYEQKKMFEEAVIYYKKALQINPKLLKVIKIVMD 1702

Query: 288  -----KEINKPHEFIFP-------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
                 K +N+  +F          YY L Q+         ++ N++KVLE+   + +   
Sbjct: 1703 IYLNKKMVNEAKDFYDSIAKNSDTYYELAQIYQNQNMLDESINNYQKVLELNNKDIDAYV 1762

Query: 336  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
            +LG +Y+     EKA E  +K  +I+ ++  A+ ++G
Sbjct: 1763 SLGSVYLNKLYYEKALECYQKILEINSKEPVAYNNIG 1799



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 127/607 (20%), Positives = 242/607 (39%), Gaps = 105/607 (17%)

Query: 52   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL--LLAKGEVEQASSAFKIV 109
            G I  K + KE+    A + YNK   I+  E  +   K  L     K E    +   K +
Sbjct: 2102 GLIYEKMKLKEK----ALECYNKVLEINPTEQKSLKRKKILEDKTQKDEFNLLNELNKNI 2157

Query: 110  LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQL 168
            ++           +  + + +G+  +S++  ++A+++ P+   A  +LG      K+   
Sbjct: 2158 IQNSNSKAEEFFQKGFLHYIQGKDDESIQCLQQAIEIDPNFYEAYGKLGFIYQSKKM--F 2215

Query: 169  GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
             +A + +++A+QL P+++E++  +        E    R  + +++  F   P        
Sbjct: 2216 DEAIENYKKAIQLSPKSLESIRNIV-------EIYHNRNMLNEVKEFFNSIPKNTETYYN 2268

Query: 229  LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            + N F      +++++  +         P   ++Y  L  +Y +K  YEKA   Y   V 
Sbjct: 2269 IGNVF---ADKYMIDEAIDYYQKTIQLNPQHINAYIELGNTYLNKIQYEKALECYNKIV- 2324

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
            EIN P + +  Y  +G V  K   +  A+  + K LE+ P+   +    G +Y      +
Sbjct: 2325 EIN-PKQAV-AYNNIGLVHFKQNKYDEAIQFYNKALEVDPNYDLSYYNSGLVYETKKMND 2382

Query: 349  KAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---------------AALDAFKTART- 392
            KA E   K  KI+P D +    + ++  + D                 +A D F    T 
Sbjct: 2383 KALECYNKVLKINPNDKKTLTRIQKINENKDKNLEEIEIDLKADKIPQSAKDYFIQGSTY 2442

Query: 393  -----------LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 439
                        LKKA E  P   E  + +G+++     +E A Q+F+ A          
Sbjct: 2443 FIKKIKDLSIDCLKKAIEIEPNYSEAYDKLGLVYQYYQMYEDAIQNFQKA---------F 2493

Query: 440  DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 499
            ++  K Y  DA  S+                               +A  LE+      A
Sbjct: 2494 ETNPKCY--DAVLSL-------------------------------MAIYLEK-KTLFEA 2519

Query: 500  SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 559
               +  I+ K  D  + + ++    + ++    +I   ++A+++N KY NA   LG++ L
Sbjct: 2520 KEFHNQIIEKNPDVPELHHKIGVAYQEKSMFDEAITCFSKAIELNPKYANAYIKLGNIYL 2579

Query: 560  KNDDWVKAKETFRAASDATDGKD--SYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKE 617
            K   + KA+E +  A +  D K   +Y  + L  +N    L+N+     L  ++ +KA +
Sbjct: 2580 KQIKYEKARECYEKAIE-IDPKQVVAYNNIGLVYYN----LKND----DLALSYYQKALQ 2630

Query: 618  LYTRVIV 624
            +  R I+
Sbjct: 2631 INPRYIL 2637



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 88/407 (21%), Positives = 176/407 (43%), Gaps = 80/407 (19%)

Query: 68   ATQYYNKASR-IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
            A ++Y++  + +D +     V + Q +L     +++ + +K ++E +   + A +     
Sbjct: 1176 AKEFYDQVPKNLDTYYELAVVYQTQKML-----DESIAIYKRIIELNSKYIKAYIQLGNA 1230

Query: 127  EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
              ++ +Y  +LE Y++ +++ P    A    IGL  ++ G   +A + F +A++++ +  
Sbjct: 1231 YLDKPQYDLALESYQKIIEIDPKKAVAYN-NIGLVYFRQGMNDEALEYFTKAIEVESK-- 1287

Query: 187  EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
                     DL    +  + + M +  +A E Y   A A N   N    +   FL ++  
Sbjct: 1288 --------YDLSMYNSGLVYEKMNQKDKALEWYK-KAFAAN-PNNKKSLSRIEFLSKKKE 1337

Query: 247  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY-----MASVKEINKPHEFIFPYY 301
            +  + + N       S    A+ Y     YE++  YY     + S++ + K  E    Y+
Sbjct: 1338 DPTIDLENQ-----ESNLQTAKDY-----YEQSIKYYNQIKDLDSIRCLKKAIELDPNYF 1387

Query: 302  G----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--------------- 342
                 LG V  +   F  A+ N++K +EI P + +++ +L +IY+               
Sbjct: 1388 EAYDRLGLVHEENNRFEEAIENYKKAIEINPQSFDSINSLMNIYLDKKMINEAKDFYNQV 1447

Query: 343  --------QLGQIEKAQELLR-------KAAKIDPRDAQAFIDLGELLISSDTGAALDA- 386
                    + G + + Q++L        KA +++P+   AFI LG         A LD  
Sbjct: 1448 PKCAETYYEFGLVYQDQKMLDEAVESYLKAIELNPKYINAFIQLG--------NAYLDKL 1499

Query: 387  -FKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
             F  A    KK  E  P + +  NNIG+++FE+   + A + F+ A+
Sbjct: 1500 LFDKAIESYKKIIEIDPSKAIAYNNIGLVYFEQEMNDLALEQFQKAI 1546



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 120/541 (22%), Positives = 226/541 (41%), Gaps = 86/541 (15%)

Query: 123  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
            Q+   +N+ +  DS+   K+A+++ P+   A    +GL   +  +  +A + +++A++++
Sbjct: 1359 QSIKYYNQIKDLDSIRCLKKAIELDPNYFEAYD-RLGLVHEENNRFEEAIENYKKAIEIN 1417

Query: 183  PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
            P++ +++ +L  + L        +K + + +  +   P CA    Y      +  Q  L 
Sbjct: 1418 PQSFDSINSLMNIYLD-------KKMINEAKDFYNQVPKCAET--YYEFGLVYQDQKML- 1467

Query: 243  EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
            ++  E+ L      P   +++  L  +Y  K  ++KA   Y   + EI+      +   G
Sbjct: 1468 DEAVESYLKAIELNPKYINAFIQLGNAYLDKLLFDKAIESY-KKIIEIDPSKAIAYNNIG 1526

Query: 303  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            L   + ++ D   AL  F+K +EI P    +L   G +Y +  Q +KA E  RK  +I+P
Sbjct: 1527 LVYFEQEMNDL--ALEQFQKAIEINPKYELSLYNSGLVYERKDQNDKALECYRKVLEINP 1584

Query: 363  RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE---------------------- 400
             + ++   + +++         + F   + L KK G+E                      
Sbjct: 1585 NEQKSLSRI-QIIKQKQNKTLNEKFDLLKVLQKKLGKEFTSKAEEYFKQGFLYFMEQKYD 1643

Query: 401  VPIEVLNN--------------IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 446
            + IE L                +G I+ +K  FE A   +K AL   I   LL  K    
Sbjct: 1644 MSIECLKKAIEINPNYCDAYERLGFIYEQKKMFEEAVIYYKKALQ--INPKLL--KVIKI 1699

Query: 447  VIDASASMLQFKDMQLFHRF--ENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 504
            V+D   +     + + F+    +N   + EL      +  N   L E I++       Y+
Sbjct: 1700 VMDIYLNKKMVNEAKDFYDSIAKNSDTYYEL----AQIYQNQNMLDESINN-------YQ 1748

Query: 505  LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL--KND 562
             +L      +DAY+ L ++   +   + ++E   + L++N K P A + +G +    KND
Sbjct: 1749 KVLELNNKDIDAYVSLGSVYLNKLYYEKALECYQKILEINSKEPVAYNNIGIVHFRQKND 1808

Query: 563  DWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRV 622
            D   A E F  A +     +    LSL N    + L  E++  K      EKA E Y +V
Sbjct: 1809 DL--ALEYFNKALEQNPKYE----LSLYN----SGLVYERKNLK------EKALECYNKV 1852

Query: 623  I 623
            +
Sbjct: 1853 L 1853



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 166/383 (43%), Gaps = 57/383 (14%)

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            T+    Q+   +  ++++ + ++ VLE +  ++ A +    V  N+  Y  +LE Y++ L
Sbjct: 1726 TYYELAQIYQNQNMLDESINNYQKVLELNNKDIDAYVSLGSVYLNKLYYEKALECYQKIL 1785

Query: 145  QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
            +++   P A    IG+  ++      A + F +AL+ +P+   +L    ++  + N    
Sbjct: 1786 EINSKEPVAYN-NIGIVHFRQKNDDLALEYFNKALEQNPKYELSLYNSGLVYERKNLK-- 1842

Query: 205  IRKGMEKMQRAFEIYPYCAMAL---NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
              K +E   +   + P    AL   N L+N    T +  + EQ        T     K  
Sbjct: 1843 -EKALECYNKVLALNPTEKKALSRINALSND---TDKMEVEEQQQNVQKQDTEFQTAKD- 1897

Query: 262  SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
             Y +    Y++K   +KA   Y  ++ EI+ P  F   Y  +G +Q     F  A+ +++
Sbjct: 1898 -YLDQGFKYYNKLLDDKAIECYKKAL-EID-PSYFE-AYEKIGLLQKANKKFEEAIESYK 1953

Query: 322  KVLEIYPDNCETLKALGHIYV-----------------------QLGQIEKAQELL---- 354
            K +EI P     +K++ +IY+                       ++G I + Q ++    
Sbjct: 1954 KAIEINPKCYSAIKSVMNIYLDKKMISEAKSFYDSIQKCATTYYEMGIIYQRQNMIDEAI 2013

Query: 355  ---RKAAKIDPRDAQAFIDLGELLISSDTGAALDA--FKTARTLLKKAGEEVPIEVL--N 407
               +KA + DP+   A+I LG         + LD   +  A    KKA E  P +V+  N
Sbjct: 2014 SNYQKAIEQDPKYKSAYIQLG--------NSYLDKVQYDQAIECYKKALEIDPNDVIAYN 2065

Query: 408  NIGVIHFEKGEFESAHQSFKDAL 430
            NIG+I++ + + + A + +  A+
Sbjct: 2066 NIGLIYYNQEKIDLALEYYNKAI 2088



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 112/272 (41%), Gaps = 18/272 (6%)

Query: 96   KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
            K   ++A + F   +E +     A +    +   + +Y  + E Y++A+++ P    A  
Sbjct: 2547 KSMFDEAITCFSKAIELNPKYANAYIKLGNIYLKQIKYEKARECYEKAIEIDPKQVVAYN 2606

Query: 156  LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
              IGL  Y L     A   +Q+ALQ++P  + +L    +     N+    +K +E   +A
Sbjct: 2607 -NIGLVYYNLKNDDLALSYYQKALQINPRYILSLYNSGLAYEMKNQN---QKALEFYNKA 2662

Query: 216  FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH-SYYNLARSYHSKG 274
             E+ P     L  +      TG   + E   +  L+       KS   YY    SY++K 
Sbjct: 2663 LEVDPNDVKTLTRMTQLLLKTGG--IDEPDVDNLLSDFGINVQKSAIDYYKQGYSYYTKK 2720

Query: 275  DYEKAGLYYMASVKEINKPHE----FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
              ++       S+K +NK  E    F   Y  L  +  +      A+ N+ K +E  P+ 
Sbjct: 2721 MKDQ-------SIKCLNKAIEMDPNFFEAYDKLALIYEEKKMLDKAIENYRKAIEKNPNF 2773

Query: 331  CETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
                  LG+IY++    + A    +K  +IDP
Sbjct: 2774 INGYNKLGNIYLEKKMFDDAIVCYQKCLEIDP 2805



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 91/449 (20%), Positives = 181/449 (40%), Gaps = 84/449 (18%)

Query: 45  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 104
           G+ Y++LG ++            A + Y KA  I+    S  +  G L   +   E A  
Sbjct: 458 GIAYSHLGNVKE-----------ALECYKKALEINPKFVSALINLGALYTNQKIYEDAIK 506

Query: 105 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
            ++ +L  + +N+  L     +   +  + +++ ++K+ +++ P+   +    IG+    
Sbjct: 507 CYQTLLTIEENNLDGLNNLGYIYSQKNMFDEAINYFKKVIEIDPTYYLS-YYNIGVAYES 565

Query: 165 LGQLGKARQAFQRALQLDPE---------NV--------EAL-----VALAVM------- 195
              L +A + + +  ++ P+         NV        EA      V+  ++       
Sbjct: 566 KQMLDEALEYYNKVEEMSPKYFIVFVRQGNVYSQKNMQNEAFQCYNKVSEQILKNIYSLS 625

Query: 196 -DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA---LA 251
            +L+ + A+ +++ ++  + A ++ P       Y+  +      H  + Q+ E      A
Sbjct: 626 EELEISRASFVQESIKNYEDAVKLNP------KYIQFYHSLGLLHSNINQMEEAMRYFQA 679

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
                P   +SY  L   Y  K  Y+KA    +    EI++        +GL     K+ 
Sbjct: 680 AIELDPKYINSYLELGNIYSGKAIYDKAQQC-LEKALEIDQNSASALNNFGLFYFTQKMD 738

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF--- 368
           D   AL +F+K LEI P+    +   G +Y     I+KA E  +    I+P D +A    
Sbjct: 739 D--KALESFKKALEINPNYELAIYNSGLVYESKNLIDKALECYKNVLLINPTDKKALSKI 796

Query: 369 -----------IDLGELL--ISSDTGAALDAF----------KTARTL--LKKAGEEVP- 402
                      ++L E+L   + +  +A D +          K A+++  LKKA E  P 
Sbjct: 797 DQLNQKDGKNNVNLEEILQDANKNLKSAKDFYQQGFVYYIQRKDAKSIECLKKAIELDPK 856

Query: 403 -IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             +  + +G+++ EK     A +S+K A 
Sbjct: 857 YFDAYDKLGLLYKEKKMISQAIESYKKAF 885



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 143/347 (41%), Gaps = 61/347 (17%)

Query: 123  QACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
            Q  + F   +Y  S+E  K+A++++P+ C    RLG    + K+ +  +A   +++ALQ+
Sbjct: 1632 QGFLYFMEQKYDMSIECLKKAIEINPNYCDAYERLGFIYEQKKMFE--EAVIYYKKALQI 1689

Query: 182  DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN---YLANHFFFTGQ 238
            +P+ ++  V   VMD+  N      K M    + F    Y ++A N   Y      +  Q
Sbjct: 1690 NPKLLK--VIKIVMDIYLN------KKMVNEAKDF----YDSIAKNSDTYYELAQIYQNQ 1737

Query: 239  HFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
            + L E +   +  L + N       +Y +L   Y +K  YEKA   Y   + EIN     
Sbjct: 1738 NMLDESINNYQKVLELNNKD---IDAYVSLGSVYLNKLYYEKALECYQ-KILEINSKEPV 1793

Query: 297  IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
               Y  +G V  +  +   AL  F K LE  P    +L   G +Y +    EKA E   K
Sbjct: 1794 --AYNNIGIVHFRQKNDDLALEYFNKALEQNPKYELSLYNSGLVYERKNLKEKALECYNK 1851

Query: 357  AAKIDPRDAQAFIDLGELLISSDTGAA----------------------LD-AFKTARTL 393
               ++P + +A   +  L  S+DT                         LD  FK    L
Sbjct: 1852 VLALNPTEKKALSRINAL--SNDTDKMEVEEQQQNVQKQDTEFQTAKDYLDQGFKYYNKL 1909

Query: 394  L--------KKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            L        KKA E  P   E    IG++     +FE A +S+K A+
Sbjct: 1910 LDDKAIECYKKALEIDPSYFEAYEKIGLLQKANKKFEEAIESYKKAI 1956



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 50/263 (19%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A ++YNKA  +D ++  T     QLLL  G ++          E D DN+ +       +
Sbjct: 2655 ALEFYNKALEVDPNDVKTLTRMTQLLLKTGGID----------EPDVDNLLS-------D 2697

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            F       ++++YK+                G   Y      ++ +   +A+++DP   E
Sbjct: 2698 FGINVQKSAIDYYKQ----------------GYSYYTKKMKDQSIKCLNKAIEMDPNFFE 2741

Query: 188  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
            A   LA++     E   + K +E  ++A E  P      N++ N +   G  +L +++ +
Sbjct: 2742 AYDKLALI---YEEKKMLDKAIENYRKAIEKNP------NFI-NGYNKLGNIYLEKKMFD 2791

Query: 248  TALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
             A+          P   + YYN A +Y  K    +A   Y    K IN     I  Y  L
Sbjct: 2792 DAIVCYQKCLEIDPNYYYGYYNQAIAYEEKQLDSQAIYCYK---KAINIDPTGINAYINL 2848

Query: 304  GQVQLKLGDFRSALTNFEKVLEI 326
            G +         +L+ F+K LEI
Sbjct: 2849 GMIYQDQEKASKSLSCFKKTLEI 2871



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 137/328 (41%), Gaps = 41/328 (12%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A +YYNK   +       +V +G +   K    +A   +  V E    N+ +L  +  +E
Sbjct: 572 ALEYYNKVEEMSPKYFIVFVRQGNVYSQKNMQNEAFQCYNKVSEQILKNIYSLSEE--LE 629

Query: 128 FNRGRY-SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            +R  +  +S++ Y+ A++++P         +GL    + Q+ +A + FQ A++LDP+ +
Sbjct: 630 ISRASFVQESIKNYEDAVKLNPKYIQFYH-SLGLLHSNINQMEEAMRYFQAAIELDPKYI 688

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            + + L  +    +  A   K  + +++A EI    A ALN     F+FT +  + ++  
Sbjct: 689 NSYLELGNI---YSGKAIYDKAQQCLEKALEIDQNSASALNNFG-LFYFTQK--MDDKAL 742

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY-------------MASVKEINKP 293
           E+        P    + YN    Y SK   +KA   Y             ++ + ++N+ 
Sbjct: 743 ESFKKALEINPNYELAIYNSGLVYESKNLIDKALECYKNVLLINPTDKKALSKIDQLNQK 802

Query: 294 H-------EFIFP-----------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
                   E I             +Y  G V         ++   +K +E+ P   +   
Sbjct: 803 DGKNNVNLEEILQDANKNLKSAKDFYQQGFVYYIQRKDAKSIECLKKAIELDPKYFDAYD 862

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPR 363
            LG +Y +   I +A E  +KA +I+P+
Sbjct: 863 KLGLLYKEKKMISQAIESYKKAFEINPK 890



 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 96/461 (20%), Positives = 187/461 (40%), Gaps = 52/461 (11%)

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           A+  ++K +EI P+  E    LG +Y   G I++A +   KA  IDP+  +++I L    
Sbjct: 130 AIKCYKKAIEIDPNCTEAYHNLGIVYEGKGLIQQAYQCYLKAQSIDPKYTKSYISLAR-- 187

Query: 376 ISSDTGAALD-AFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGD 432
                   LD   + A   LKKA E  P  +E    +G ++  +     A + +K A+  
Sbjct: 188 -----NYYLDFQIQDAIKSLKKAIEIEPNSVEAYERLGFVYQNEKNNSEAIKYYKKAI-- 240

Query: 433 GIWLTLLDSKTKTYVIDASASMLQFKD-MQLFHR-FENDGNHVELPWNKVTVLFNLARLL 490
            I     +++    +I  + +   F D  Q + R  E D   V+  +N + +++    ++
Sbjct: 241 EIDPNYYNAQFNLALIYQNQN--NFDDSFQCYRRAIEIDPKQVD-AYNNIGLIYYYKGMI 297

Query: 491 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
           ++  ++      Y+  L     Y  AY   A   +    +  +I+   + +++N  +  +
Sbjct: 298 KEALES------YKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQCYKKTIEINPSFLKS 351

Query: 551 LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY-----FAALRNEKRA- 604
           L+ LGD+ + N+   +  E F+      D +  +   SL +  Y       A+ + K   
Sbjct: 352 LTRLGDICIDNNLLDEGIECFKKIIQ-LDPQSYFDHYSLADLYYKKNMLVEAINHYKITL 410

Query: 605 ---PKLEATH------------LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 649
              P+  + H            LE+A + Y + I  + ++  A   +G+  +  G    +
Sbjct: 411 EINPQQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPNSQEAHFNSGIAYSHLGNVKEA 470

Query: 650 KDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILL 709
            + + +  E     V        INL  +Y  Q  +  A+K YQ  L     N D   L 
Sbjct: 471 LECYKKALEINPKFV-----SALINLGALYTNQKIYEDAIKCYQTLLTIEENNLDG--LN 523

Query: 710 YLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 750
            L   + +   + +      + I + P+ Y   ++ GVA +
Sbjct: 524 NLGYIYSQKNMFDEAINYFKKVIEIDPTYYLSYYNIGVAYE 564



 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 122/310 (39%), Gaps = 40/310 (12%)

Query: 100  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            E A   F+   E +     A+L    +   +    ++ EF+ + ++ +P  P  +   IG
Sbjct: 2483 EDAIQNFQKAFETNPKCYDAVLSLMAIYLEKKTLFEAKEFHNQIIEKNPDVP-ELHHKIG 2541

Query: 160  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
            +   +     +A   F +A++L+P+   A + L  + L+        K  E  ++A EI 
Sbjct: 2542 VAYQEKSMFDEAITCFSKAIELNPKYANAYIKLGNIYLKQ---IKYEKARECYEKAIEID 2598

Query: 220  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
            P   +A N +   ++      L     + AL +    P    S YN   +Y  K   +KA
Sbjct: 2599 PKQVVAYNNIGLVYYNLKNDDLALSYYQKALQI---NPRYILSLYNSGLAYEMKNQNQKA 2655

Query: 280  GLYYMAS-------VKEINKPHEFIFPYYGLGQ--VQLKLGDF-----RSALTNFE---- 321
              +Y  +       VK + +  + +    G+ +  V   L DF     +SA+  ++    
Sbjct: 2656 LEFYNKALEVDPNDVKTLTRMTQLLLKTGGIDEPDVDNLLSDFGINVQKSAIDYYKQGYS 2715

Query: 322  ---------------KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
                           K +E+ P+  E    L  IY +   ++KA E  RKA + +P    
Sbjct: 2716 YYTKKMKDQSIKCLNKAIEMDPNFFEAYDKLALIYEEKKMLDKAIENYRKAIEKNPNFIN 2775

Query: 367  AFIDLGELLI 376
             +  LG + +
Sbjct: 2776 GYNKLGNIYL 2785


>gi|428319148|ref|YP_007117030.1| histidine kinase [Oscillatoria nigro-viridis PCC 7112]
 gi|428242828|gb|AFZ08614.1| histidine kinase [Oscillatoria nigro-viridis PCC 7112]
          Length = 1018

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 176/387 (45%), Gaps = 34/387 (8%)

Query: 58  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 117
           Q EK  HF      ++K+ +I+ + P T       L + G+ E+A    +  ++ +  N 
Sbjct: 280 QFEKAWHF------FDKSLQIEPNAPITLNLYATALASNGQHEKALEFLERSIQIE-PNA 332

Query: 118 PALLGQ-ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL-----GQLGKA 171
           P  L + A    + G++  +L++++R+LQ+ P+ P      I L RY       GQ  KA
Sbjct: 333 PITLSRYATALTSNGQHEKALQYFERSLQLEPNAP------ITLSRYATALTSNGQHEKA 386

Query: 172 RQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN 231
            Q F+R+LQL+P N   L   A     + +     K ++ ++R+ ++ P   + LN  AN
Sbjct: 387 LQYFERSLQLEPNNPITLSRYATALASSGQH---EKLVQILERSLQLEPNDPITLNLYAN 443

Query: 232 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EI 290
               TGQH    Q  E +L +  + P     Y   A +  S G YEKA  Y+  S++ E 
Sbjct: 444 ALASTGQHEKALQYFELSLQLEPNAPITLSRY---ATALASTGQYEKALQYFELSLQLEP 500

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
           N P         L       G    AL  FE+ ++I P++  TL    H     GQ EKA
Sbjct: 501 NAPITLSRYANALASN----GHPDQALQFFERSIQIEPNHPRTLSCYAHTLATTGQYEKA 556

Query: 351 QELLRKAAKIDPRDAQ---AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN 407
            +    + +I P++A+   +++D    L+    G   +A    + +  +A       V+ 
Sbjct: 557 LQYFELSLQIKPQNARTLSSYLDFQYALVLEKVGKHQEAIDQLKAIKIEALTPYQANVIR 616

Query: 408 -NIGVIHFEKGEFESAHQSFKDALGDG 433
            N+G ++++  + E  ++ F+ A+ + 
Sbjct: 617 VNLGRLYYQIKQPEKGNEYFEAAIANS 643



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 118/304 (38%), Gaps = 57/304 (18%)

Query: 69  TQYYNKASRIDMHEPS---TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           T+ ++   R+ + EPS   T       L + G+ E+A   F   L+   D+   L   A 
Sbjct: 180 TKAFDILERLLVIEPSNNTTVRTYANALASNGQFEKAWHFFDKSLQNKPDDAVTLSRYAN 239

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY-----KLGQLGKARQAFQRALQ 180
              + G++  +  F+ ++LQ  P         + L RY       GQ  KA   F ++LQ
Sbjct: 240 ALASNGQFEKAWHFFDKSLQNKPDD------AVTLSRYANALASNGQFEKAWHFFDKSLQ 293

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           ++P N    + L    L +N      K +E ++R+ +I P   + L+  A      GQH 
Sbjct: 294 IEP-NAPITLNLYATALASN--GQHEKALEFLERSIQIEPNAPITLSRYATALTSNGQHE 350

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
              Q  E +L +  + P     Y   A +  S G +EKA  Y                  
Sbjct: 351 KALQYFERSLQLEPNAPITLSRY---ATALTSNGQHEKALQY------------------ 389

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
                              FE+ L++ P+N  TL          GQ EK  ++L ++ ++
Sbjct: 390 -------------------FERSLQLEPNNPITLSRYATALASSGQHEKLVQILERSLQL 430

Query: 361 DPRD 364
           +P D
Sbjct: 431 EPND 434



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 152/391 (38%), Gaps = 62/391 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A QY+ ++ +++ + P T       L + G+ E+A   F+  L+ + +N   L   A   
Sbjct: 352 ALQYFERSLQLEPNAPITLSRYATALTSNGQHEKALQYFERSLQLEPNNPITLSRYATAL 411

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + G++   ++  +R+LQ+ P+ P  + L         GQ  KA Q F+ +LQL+P    
Sbjct: 412 ASSGQHEKLVQILERSLQLEPNDPITLNLYANALA-STGQHEKALQYFELSLQLEPN--- 467

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A + L+             K ++  + + ++ P   + L+  AN     G      Q  E
Sbjct: 468 APITLSRYATALASTGQYEKALQYFELSLQLEPNAPITLSRYANALASNGHPDQALQFFE 527

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY--YGLGQ 305
            ++ +  + P     Y   A +  + G YEKA  Y+  S++   +    +  Y  +    
Sbjct: 528 RSIQIEPNHPRTLSCY---AHTLATTGQYEKALQYFELSLQIKPQNARTLSSYLDFQYAL 584

Query: 306 VQLKLGDFRSALTNFE--KVLEIYPDNCETLKA-LGHIYVQLGQIEK------------- 349
           V  K+G  + A+   +  K+  + P     ++  LG +Y Q+ Q EK             
Sbjct: 585 VLEKVGKHQEAIDQLKAIKIEALTPYQANVIRVNLGRLYYQIKQPEKGNEYFEAAIANSD 644

Query: 350 ----------------------------AQELLRKAAKIDPRDAQAF----IDLGE---- 373
                                       A ELLR+  +  PR AQA     ++L E    
Sbjct: 645 DKDRTDDKEITLLYISRSILATKPYSERAVELLRQIKEDSPRYAQALEMLTLNLSEEGYF 704

Query: 374 LLISSDTGAAL-DAFKTARTLLKKAGEEVPI 403
            +  +DT   L D     R +  K   E+ I
Sbjct: 705 EMFKTDTQIGLSDTEMLNRAMYHKIANEISI 735


>gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1417

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 154/734 (20%), Positives = 300/734 (40%), Gaps = 113/734 (15%)

Query: 1   MQREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           + R YF Q  +++  + LE+    EID  YA+  YER             LG +   Q  
Sbjct: 83  IARVYFNQDNLDESIKFLEKAI--EIDPNYAEA-YER-------------LGWVYENQNL 126

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            ++    A   Y KA  ID +   +    G +  ++G++++    +K +LE D +N+ AL
Sbjct: 127 IDQ----AIDSYKKAIEIDPNHLDSHYSLGVVYESQGKIDEGIEHYKKMLEIDPNNIKAL 182

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           +  +   F    + D+++   + +++ P    A    +G       ++ +A Q +Q+ ++
Sbjct: 183 INLSRNYFCDLMHEDAIKCLNKVIEIEPKNKVAYE-RLGFIYENQNKIDEAIQNYQKVIE 241

Query: 181 LDPENVEALVALAVMDLQAN---EAA-GIRKGME---KMQRAFEIYPYCAMALNYLANHF 233
           LDP      ++L  M    N   EA   ++KG++   K  +A+E   Y     N     F
Sbjct: 242 LDPNFQSVYISLGFMYFTKNMDEEAIECLKKGIQINPKFVQAYERLGYVYQMKNMTEEAF 301

Query: 234 ------------FFTGQ------HFLVEQLTETALAVTNH---GPTKSHSYYNLARSYHS 272
                       +F  Q      ++ ++ + E  +   N     P   +++YNL   Y +
Sbjct: 302 EYYKKAIEIDPKYFEAQFNLGLLYYNLKMVNEAEVCYLNALQIDPLDIYTHYNLGLVYET 361

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           K  ++KA   Y  ++ E+N   +++  Y   G + L+      A+  ++K+LE+ P+  +
Sbjct: 362 KKMFDKALSCYQKAI-ELNP--KYLNAYIRSGNIYLETKKQDDAIQCYQKILELDPNYVD 418

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG----------ELLISSDTGA 382
            +  LG +Y +   ++++ E  +KA +IDP   +A  +LG          + + S +   
Sbjct: 419 AINNLGIVYEEKKMLDESMECYKKALQIDPLYVKAHYNLGIVYELKKMHDQAIESYERAI 478

Query: 383 ALDA------------------FKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESA 422
            +D                     +A    KKA E  P  +   NNIG+++++K  F+ A
Sbjct: 479 EIDPKYINAYNKLGNIYLDKKILYSALNYYKKALEIDPNYVNAYNNIGLVYYDKKMFDEA 538

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
            +S+  A      + +     + Y        L+ +      ++E     +EL    ++ 
Sbjct: 539 LESYNKA------IEINPKYNQAYYNSGLVYELKNQKETAIEKYE---KAIELSPKYISA 589

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           L  LA +             ++ IL    D V    RL  I     N   ++    +AL+
Sbjct: 590 LIRLADIYADSQQYQRGIECFKRILEITPDSVYDNYRLGYIYYCLKNFDEAMYYYKKALE 649

Query: 543 VNGKYPNALSMLGDLELKNDDWVKA-----------KETFRAASDA----------TDGK 581
           +N  Y NA++ +G +     ++ +A           K  F+A  ++           +  
Sbjct: 650 INPNYINAINNVGLVYYNQKNYEEALKCYEKAIEIDKNYFQAHYNSGILYEAKKMIDEAL 709

Query: 582 DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 641
           D Y  +   N NYF+AL        L+    + A E + +++    + + A N  G+V  
Sbjct: 710 DCYKKVMEINPNYFSALIRSGNI-YLDKYMTDNALECFKKILEIDPNYIDAINNLGIVYE 768

Query: 642 EKGQFDVSKDLFTQ 655
           +K  FD + D + +
Sbjct: 769 DKQMFDEAIDCYIK 782



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 158/760 (20%), Positives = 322/760 (42%), Gaps = 82/760 (10%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A +Y+N+   I+++        G     + +++QA   +K V+  +   + A +  A V 
Sbjct: 28  AVEYFNRVLNINLNHEDANYNLGFTYEKQDKLDQALECYKKVISINPSYIKAYVSIARVY 87

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
           FN+    +S++F ++A+++ P+   A  RLG       L  + +A  ++++A+++DP ++
Sbjct: 88  FNQDNLDESIKFLEKAIEIDPNYAEAYERLGWVYENQNL--IDQAIDSYKKAIEIDPNHL 145

Query: 187 EALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           ++  +L V+     E+ G I +G+E  ++  EI P    AL  L+ ++F    H   E  
Sbjct: 146 DSHYSLGVV----YESQGKIDEGIEHYKKMLEIDPNNIKALINLSRNYFCDLMH---EDA 198

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            +    V    P    +Y  L   Y ++   ++A   Y    K I     F   Y  LG 
Sbjct: 199 IKCLNKVIEIEPKNKVAYERLGFIYENQNKIDEAIQNYQ---KVIELDPNFQSVYISLGF 255

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
           +         A+   +K ++I P   +  + LG++Y      E+A E  +KA +IDP+  
Sbjct: 256 MYFTKNMDEEAIECLKKGIQINPKFVQAYERLGYVYQMKNMTEEAFEYYKKAIEIDPKYF 315

Query: 366 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAH 423
           +A  +LG L  +      L     A      A +  P+++    N+G+++  K  F+ A 
Sbjct: 316 EAQFNLGLLYYN------LKMVNEAEVCYLNALQIDPLDIYTHYNLGLVYETKKMFDKAL 369

Query: 424 QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD----MQLFHR-FENDGNHVELPWN 478
             ++ A+        L+ K     I +    L+ K     +Q + +  E D N+V+   N
Sbjct: 370 SCYQKAIE-------LNPKYLNAYIRSGNIYLETKKQDDAIQCYQKILELDPNYVD-AIN 421

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            + +++   ++L++  +    ++    +      YV A+  L  + + +     +IE   
Sbjct: 422 NLGIVYEEKKMLDESMECYKKALQIDPL------YVKAHYNLGIVYELKKMHDQAIESYE 475

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA-TDGKDSYATLSLGNWN---Y 594
            A++++ KY NA + LG++ L       A   ++ A +   +  ++Y  + L  ++   +
Sbjct: 476 RAIEIDPKYINAYNKLGNIYLDKKILYSALNYYKKALEIDPNYVNAYNNIGLVYYDKKMF 535

Query: 595 FAALRNEKRA----PKLEATHL------------EKAKELYTRVIVQHTSNLYAANGAGV 638
             AL +  +A    PK    +             E A E Y + I      + A      
Sbjct: 536 DEALESYNKAIEINPKYNQAYYNSGLVYELKNQKETAIEKYEKAIELSPKYISALIRLAD 595

Query: 639 VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL-- 696
           + A+  Q+    + F ++ E    SV+    D +  L ++Y+   NF  AM  Y+  L  
Sbjct: 596 IYADSQQYQRGIECFKRILEITPDSVY----DNY-RLGYIYYCLKNFDEAMYYYKKALEI 650

Query: 697 RKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST 756
              Y N    + L     +Y  + +++  K   +AI +  + +   +++G+         
Sbjct: 651 NPNYINAINNVGL----VYYNQKNYEEALKCYEKAIEIDKNYFQAHYNSGI--------- 697

Query: 757 LQKTRRTADEVRSTVAE-LENAVRVFSHLSAASNLHLHGF 795
           L + ++  DE      + +E     FS L  + N++L  +
Sbjct: 698 LYEAKKMIDEALDCYKKVMEINPNYFSALIRSGNIYLDKY 737



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 163/701 (23%), Positives = 277/701 (39%), Gaps = 106/701 (15%)

Query: 4    EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYY-----------TYLG 52
            +Y     +E F++ILE      ID  Y D        +N LG+ Y            Y+ 
Sbjct: 736  KYMTDNALECFKKILE------IDPNYIDA-------INNLGIVYEDKQMFDEAIDCYIK 782

Query: 53   KIETKQREKEEHFILATQYYNK------------ASRIDMHEPSTWVGKGQLLLAKGEVE 100
             I+      + H+ L   Y NK               ID    S +   G + L +   E
Sbjct: 783  AIQINPNYVKAHYNLGVLYENKFKFDDALACFLKVIEIDPKYMSAYNRAGNIYLDRQMNE 842

Query: 101  QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
            +A   +K  LE D   V A      + +N+ +  D+LE+Y +ALQ++P+   A +   GL
Sbjct: 843  KALEFYKKALEIDPTYVNAYNNIGLIFYNQRKLDDALEYYDKALQINPNYFQA-QYNSGL 901

Query: 161  CRYKLGQLGKARQAFQRALQLDPENVEALVALAVM----DLQANEAAGIRKGMEKMQRAF 216
                  Q   A   + RAL+++P    A + L  +     ++  E   ++K  E+     
Sbjct: 902  VYELKFQNELAILCYTRALEINPNYTNAQIRLENILLKDGIKQEELEVLKKKAEENTNNP 961

Query: 217  EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
            E Y        Y   + ++T  +F +++            P  S +Y  L   Y  K   
Sbjct: 962  EDY--------YKLGYVYYT--NFNMDEAISCLNKAIEINPNYSEAYDKLGLIYEEKKMD 1011

Query: 277  EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            EKA  YY  +++  +K    I    GLG + L       A+  +   LE+ P + +T   
Sbjct: 1012 EKAIEYYKKAIEIDSKCFNAIN---GLGNIYLDQKLTAEAIKCYMAALELDPKSVKTHYN 1068

Query: 337  LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 396
            LG  +      ++A    +KA ++DPR   A+ +LG  LI    G   DA     T  +K
Sbjct: 1069 LGISFEDERNYDQAVYHYKKAVELDPRYINAYNNLG--LIYEMKGKLDDAL----TCYQK 1122

Query: 397  AGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA--LGDGIWLTLLDSKT--KTYVIDA 450
            A E  P  +   NN+G++++ + + E A  +++ A  L    +  L +S    +TY    
Sbjct: 1123 ALEINPNYVNAHNNVGLVYYAQNKMEDALINYRKALELNPNYYQALYNSGLIYETYYKQI 1182

Query: 451  SASMLQFKDM-----QLFHRFENDGN-----------------HVELPWNKVTVLFNLAR 488
              ++  +K +     + F  +   GN                  +E+  N +  + NL  
Sbjct: 1183 DQAIAFYKRVIELSPKYFSAYIRLGNIYLDSKMMDEALDCYQRILEIDPNYIDAINNLGI 1242

Query: 489  LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 548
            + E+      A   YR  +     Y  AY  +  I + +N    +I      ++++ KY 
Sbjct: 1243 VYEEKEMLDEALKCYRRAIELNPKYTKAYYNMGIIYEDQNKFDDAINCYKTIIELDPKYI 1302

Query: 549  NALSMLGD--LELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 606
            NA++ LG+  L+L+NDD  +A   ++ A +              N NY  A  N      
Sbjct: 1303 NAINRLGNIYLDLQNDD--EALACYQKALEI-------------NPNYLYAFYNLGLVYS 1347

Query: 607  LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 647
             E   + KA + Y +VI      +      GV+  EK Q +
Sbjct: 1348 -EKKKIGKAIQCYQKVISIDPKYIDGYINLGVIFDEKKQMN 1387



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 152/715 (21%), Positives = 275/715 (38%), Gaps = 117/715 (16%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y K   I+ +  S  +  G + L K   + A   FK +LE D + + A+     V  ++ 
Sbjct: 712  YKKVMEINPNYFSALIRSGNIYLDKYMTDNALECFKKILEIDPNYIDAINNLGIVYEDKQ 771

Query: 132  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-- 189
             + ++++ Y +A+Q++P+   A    +G+      +   A   F + +++DP+ + A   
Sbjct: 772  MFDEAIDCYIKAIQINPNYVKA-HYNLGVLYENKFKFDDALACFLKVIEIDPKYMSAYNR 830

Query: 190  VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL--TE 247
                 +D Q NE     K +E  ++A EI P    A N +     F  Q  L + L   +
Sbjct: 831  AGNIYLDRQMNE-----KALEFYKKALEIDPTYVNAYNNIG--LIFYNQRKLDDALEYYD 883

Query: 248  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH-------EFIF-- 298
             AL +    P    + YN    Y  K   E A L Y  ++ EIN  +       E I   
Sbjct: 884  KALQI---NPNYFQAQYNSGLVYELKFQNELAILCYTRAL-EINPNYTNAQIRLENILLK 939

Query: 299  -----------------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
                                    YY LG V     +   A++   K +EI P+  E   
Sbjct: 940  DGIKQEELEVLKKKAEENTNNPEDYYKLGYVYYTNFNMDEAISCLNKAIEINPNYSEAYD 999

Query: 336  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL- 393
             LG IY +    EKA E  +KA +ID +   A   LG + +    T  A+  +  A  L 
Sbjct: 1000 KLGLIYEEKKMDEKAIEYYKKAIEIDSKCFNAINGLGNIYLDQKLTAEAIKCYMAALELD 1059

Query: 394  --------------------------LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQS 425
                                       KKA E  P  I   NN+G+I+  KG+ + A   
Sbjct: 1060 PKSVKTHYNLGISFEDERNYDQAVYHYKKAVELDPRYINAYNNLGLIYEMKGKLDDALTC 1119

Query: 426  FKDALGDGIWLTLLDSKTKTYV-IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 484
            ++ AL               YV    +  ++ +   ++     N    +EL  N    L+
Sbjct: 1120 YQKAL----------EINPNYVNAHNNVGLVYYAQNKMEDALINYRKALELNPNYYQALY 1169

Query: 485  NLARLLEQIHDTVAASV-LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKV 543
            N   + E  +  +  ++  Y+ ++     Y  AY+RL  I      +  +++     L++
Sbjct: 1170 NSGLIYETYYKQIDQAIAFYKRVIELSPKYFSAYIRLGNIYLDSKMMDEALDCYQRILEI 1229

Query: 544  NGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT---------------------DGKD 582
            +  Y +A++ LG +  + +   +A + +R A +                       D  +
Sbjct: 1230 DPNYIDAINNLGIVYEEKEMLDEALKCYRRAIELNPKYTKAYYNMGIIYEDQNKFDDAIN 1289

Query: 583  SYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE 642
             Y T+   +  Y  A+ N      L+  + ++A   Y + +  + + LYA    G+V +E
Sbjct: 1290 CYKTIIELDPKYINAI-NRLGNIYLDLQNDDEALACYQKALEINPNYLYAFYNLGLVYSE 1348

Query: 643  KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
            K +   +   + +V      S+  +  D +INL  ++  +     A+  Y+  L+
Sbjct: 1349 KKKIGKAIQCYQKVI-----SIDPKYIDGYINLGVIFDEKKQMNKALTQYKKALK 1398



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 158/374 (42%), Gaps = 53/374 (14%)

Query: 60   EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
            E E ++  A  +Y KA  +D    + +   G +   KG+++ A + ++  LE + + V A
Sbjct: 1074 EDERNYDQAVYHYKKAVELDPRYINAYNNLGLIYEMKGKLDDALTCYQKALEINPNYVNA 1133

Query: 120  LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
                  V + + +  D+L  Y++AL+++P+   A+     +      Q+ +A   ++R +
Sbjct: 1134 HNNVGLVYYAQNKMEDALINYRKALELNPNYYQALYNSGLIYETYYKQIDQAIAFYKRVI 1193

Query: 180  QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            +L P+   A + L  + L   ++  + + ++  QR  EI P    A+N L     +  + 
Sbjct: 1194 ELSPKYFSAYIRLGNIYL---DSKMMDEALDCYQRILEIDPNYIDAINNLG--IVYEEKE 1248

Query: 240  FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
             L E L     A+    P  + +YYN+   Y  +                          
Sbjct: 1249 MLDEALKCYRRAIE-LNPKYTKAYYNMGIIYEDQNK------------------------ 1283

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
                         F  A+  ++ ++E+ P     +  LG+IY+ L   ++A    +KA +
Sbjct: 1284 -------------FDDAINCYKTIIELDPKYINAINRLGNIYLDLQNDDEALACYQKALE 1330

Query: 360  IDPRDAQAFIDLGELLISSD---TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 416
            I+P    AF +LG  L+ S+    G A+  ++   ++  K      I+   N+GVI  EK
Sbjct: 1331 INPNYLYAFYNLG--LVYSEKKKIGKAIQCYQKVISIDPKY-----IDGYINLGVIFDEK 1383

Query: 417  GEFESAHQSFKDAL 430
             +   A   +K AL
Sbjct: 1384 KQMNKALTQYKKAL 1397



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 141/309 (45%), Gaps = 18/309 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y KA  +     S  +    +     + ++    FK +LE   D+V        + 
Sbjct: 572 AIEKYEKAIELSPKYISALIRLADIYADSQQYQRGIECFKRILEITPDSVYDNYRLGYIY 631

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           +    + +++ +YK+AL+++P+   AI   +GL  Y      +A + +++A+++D    +
Sbjct: 632 YCLKNFDEAMYYYKKALEINPNYINAIN-NVGLVYYNQKNYEEALKCYEKAIEIDKNYFQ 690

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A     ++  +A +   I + ++  ++  EI P      NY +     +G  +L + +T+
Sbjct: 691 AHYNSGIL-YEAKKM--IDEALDCYKKVMEINP------NYFS-ALIRSGNIYLDKYMTD 740

Query: 248 TAL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            AL     +    P    +  NL   Y  K  +++A   Y+ ++ +IN P+ ++  +Y L
Sbjct: 741 NALECFKKILEIDPNYIDAINNLGIVYEDKQMFDEAIDCYIKAI-QIN-PN-YVKAHYNL 797

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G +      F  AL  F KV+EI P         G+IY+     EKA E  +KA +IDP 
Sbjct: 798 GVLYENKFKFDDALACFLKVIEIDPKYMSAYNRAGNIYLDRQMNEKALEFYKKALEIDPT 857

Query: 364 DAQAFIDLG 372
              A+ ++G
Sbjct: 858 YVNAYNNIG 866


>gi|301779788|ref|XP_002925318.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog, partial
           [Ailuropoda melanoleuca]
          Length = 468

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 101/177 (57%), Gaps = 11/177 (6%)

Query: 692 YQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQK 751
           Y+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+
Sbjct: 1   YENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQR 60

Query: 752 FSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLL 811
            + S L+  +    EV + V ELE A R FS+LS   +     FD     T    C  LL
Sbjct: 61  LATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLL 118

Query: 812 DAAKIHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 859
             A+ H   A +++++ R       Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 119 SQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 175


>gi|390602165|gb|EIN11558.1| TPR-like protein [Punctularia strigosozonata HHB-11173 SS5]
          Length = 1107

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 20/262 (7%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
           +++ +G   L    ++ A  +F+ VL A   NV ALLG+A + + R ++ +SL  ++R L
Sbjct: 148 SFLTRGIHQLGTRSMDDALRSFESVLAAQPTNVVALLGKARIYYVRRQFKESLRLFQRVL 207

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---- 200
           +++PSC    R+GIG+C ++L    KA+ A+QR+L+++P    A + L +  + A+    
Sbjct: 208 ELNPSCRPDPRVGIGMCLWQLDHKAKAKAAWQRSLEVNPTEWSAALLLGLEAINASKDEL 267

Query: 201 ---EAAGIR---KGMEKMQRAFE-IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
              +A  I     G + ++ AF+      A A N L + F   G +    +L E  +   
Sbjct: 268 KHPDAERIHLFVTGTKYVESAFKGSNQRAAAAANVLCDVFLRKGAYDRAMKLAERTIQYA 327

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH-EFIFPYYGLGQVQLKLG- 311
           +     +  Y +  R  H+KGD   A  Y+  + KE   PH + +    GL Q+ +K G 
Sbjct: 328 DTLSVLTEGYIHAGRVSHAKGDVANATKYFETATKE---PHPKTVLASVGLAQMHVKKGE 384

Query: 312 --DFRSALTNFEKVLEIYPDNC 331
             ++ +A+   + +L   P N 
Sbjct: 385 SQEYAAAIHTLDTLLS--PPNA 404



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 90/430 (20%), Positives = 181/430 (42%), Gaps = 52/430 (12%)

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
            +VL+NLAR  E   +   A+  Y+ +L ++ +YVDA +R AA+    N    + +L+ +
Sbjct: 567 TSVLYNLARCYEDQGEQGMATEAYKKLLARHPEYVDAKIRQAAMLSDLNEKNEAHDLIKQ 626

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 599
           AL       N  +      ++   +  AK+         D  D +A  +  + +Y  A  
Sbjct: 627 ALSSQNGNLNLRAFYTHFLIEAGMYKPAKDFLYNTIKDFDRHDVHALCATAHIHYHQARE 686

Query: 600 NEKRAPKLEATH---LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-------------- 642
           +   + +  A      ++A   Y   +        AA G  +V AE              
Sbjct: 687 SRDSSSQGIAERRKGFQRAAGFYENALSVDPMCAVAAQGLAIVTAEDALGTLNGALQPGA 746

Query: 643 ------KGQFDV--SKDLFTQVQEAA-SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 693
                 K   D+  + ++F++V+E    GSV+       +N+ H ++A+  +  A++ Y+
Sbjct: 747 PAPDPLKRATDLRDALEIFSKVRETLYDGSVY-------MNIGHCHYARDEYDRAIESYE 799

Query: 694 NCLRKFYYNTDAQILLYLARTHYEAEQ-------WQDCKKSLLRAIHLAPSNYTLRFDAG 746
              R+FY N +   LL L R+ Y                K    A++L P +  + ++  
Sbjct: 800 TASRRFYDNHNVAALLCLCRSWYAKANKELSFTAMNTALKYAQNALYLNPHDKAIVYNIA 859

Query: 747 VAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHV 804
           +  QK +    ++   +R+  ++   + +  +A ++F+ L++  +  L  ++ +  +   
Sbjct: 860 MIQQKAAELLFSIPPAKRSLADLEKAIGQATHAQKMFASLASDKSTPL-PYNIEIADQRR 918

Query: 805 EYCKHLLDAAKIHREAAEREEQQNRQRQEAA---------RQAALAEEARRKAEEQKKYL 855
            Y + +L   + H     + E ++R + +AA         RQ A+  E  ++ E   K L
Sbjct: 919 RYGESMLRRGEEHLATQRQYESEHRAKLDAARQRRMEERQRQEAMERERAQELEVAAKRL 978

Query: 856 LEKRKLEDEQ 865
            E+R+L  EQ
Sbjct: 979 AEERRLAREQ 988


>gi|325091791|gb|EGC45101.1| tetratricopeptide repeat protein [Ajellomyces capsulatus H88]
          Length = 1209

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 174/389 (44%), Gaps = 61/389 (15%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKI 54
           Y KQ +++    IL  G    +      V  E++ +L  +   Y             G++
Sbjct: 77  YAKQNQIDHAIDILNRG----LSSLAQGVTKEKLGLLGWICWLYMRKSREAPRVAPEGQL 132

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE---------------- 98
            ++ + K+ +   AT   N+ASR++   PS ++ +G L + +                  
Sbjct: 133 VSEAKTKDYYLQAATSTLNEASRLNPAYPSLFLARGVLSILRASLQPPAKALRPGTVDTS 192

Query: 99  --VEQASSAFKIVLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC-- 150
             VE    A K   E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+   
Sbjct: 193 ERVETLRQALKCFDESAKSFGNRNVMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRD 252

Query: 151 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG 204
           P   R+GIG C ++L    +A+ A+ RAL L+PE+  A + L    L        N+ A 
Sbjct: 253 PDP-RIGIGCCLWQLDFKEQAKAAWTRALALNPESKVANILLGAYYLYDSSRHATNDPAF 311

Query: 205 ---IRKGMEK-MQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNH 255
               +  M +  Q+AF++   YP  C+M   Y     F   +HF  VE L   A+ +T+ 
Sbjct: 312 GSLYKIAMTQYTQKAFKVDKEYPMTCSMFGGY-----FLLRKHFPTVEALARKAIELTDV 366

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFR 314
               S  +Y LAR  H +G+  +A  YY  S +          P  +G  Q+Q++ GD+ 
Sbjct: 367 NAIASDGWYLLARKEHFEGNSARANEYYSRSDQARGGGDSGYLPAKFGAVQMQVRTGDYD 426

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQ 343
            A    EK+++    N E++  LG ++ +
Sbjct: 427 GAKFRLEKIIQ-QTKNPESMTLLGALFAE 454


>gi|451981544|ref|ZP_21929896.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
 gi|451761217|emb|CCQ91160.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
          Length = 660

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 176/424 (41%), Gaps = 65/424 (15%)

Query: 44  LGVYYTYLGKIETKQREKEEHFIL-----------------------ATQYYNKASRIDM 80
           LG  Y +LG+ E  ++E +E   L                       A    NKA  ID 
Sbjct: 196 LGNLYHHLGRYEEAEQEFQESLFLDPKLEAAHVSLGNLYVDTDRLNDAEDAINKALSIDS 255

Query: 81  HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLE 138
           +          +    G  EQA   ++  L  + DN      LG +     R  Y +++E
Sbjct: 256 NSVDARHSLALIHFQSGLFEQAEKEWRACLRREPDNASFYNNLGNSLSSMER--YEEAIE 313

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 198
            Y++A  + P  P  +   +GL    L +  +A   +  AL+L+P+++ ALV +A  +L 
Sbjct: 314 TYQKAFALEPDNPLPL-FNLGLVYEDLDRFQEAEDNYLHALRLNPQHLSALVNIA--NLY 370

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF----LVE------QLTET 248
           +N           + R+ E  PY   AL   + H      HF    ++E      Q  + 
Sbjct: 371 SN-----------LGRSEEAIPYLRQALELDSKH---AKAHFGMACILEDERKFLQAEQH 416

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
              V +  P    ++  L   +   G+ E A L       E++ PHE +  Y+ LG    
Sbjct: 417 LCNVLDQEPDNQFAWRKLGSVHLESGNPE-AALRAFLKASELD-PHEPVH-YFYLGVTHQ 473

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
            L D RSA T + K L + PDN      LG +Y    +  +A+ LLR+A    P D  A 
Sbjct: 474 DLDDPRSAETAYLKALHLQPDNASVCNNLGLLYSHEERYAEAERLLREALLHAPEDINAL 533

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 426
            +LG  L+    G     F  A T+ ++A E  P   ++ NN+G+  F +   + A ++ 
Sbjct: 534 YNLG--LVLDRIG----RFDEAETVYRRALEVSPDDAQIWNNLGLARFARNRLQEAEEAL 587

Query: 427 KDAL 430
           K+A+
Sbjct: 588 KEAV 591



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 132/557 (23%), Positives = 214/557 (38%), Gaps = 75/557 (13%)

Query: 59  REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD--- 115
           R +++ +  A +YY  + ++D     T    G L   +   E+A   +   LE D D   
Sbjct: 64  RHRQQRYPEAEKYYRASLKLDTENSRTLNNLGSLYHDQERWEEAEREYLKALEIDPDYAL 123

Query: 116 --NVPALL---------GQACVE--------------------FNRGRYSDSLEFYKRAL 144
             N   LL          +A  E                    F+  +Y+ + + YK +L
Sbjct: 124 PHNNLGLLHARRQDFEGARAAFETAMRLDPEYDQAHYNLGNLYFDHQKYALAEKAYKESL 183

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           +++P         +G   + LG+  +A Q FQ +L LDP+   A V+L  + +  +    
Sbjct: 184 RLNPDS-AFTHHELGNLYHHLGRYEEAEQEFQESLFLDPKLEAAHVSLGNLYVDTDR--- 239

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +    + + +A  I      A + LA   F +G   L EQ  +   A     P  +  Y 
Sbjct: 240 LNDAEDAINKALSIDSNSVDARHSLALIHFQSG---LFEQAEKEWRACLRREPDNASFYN 296

Query: 265 NLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           NL  S  S   YE+A   Y  A   E + P     P + LG V   L  F+ A  N+   
Sbjct: 297 NLGNSLSSMERYEEAIETYQKAFALEPDNP----LPLFNLGLVYEDLDRFQEAEDNYLHA 352

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 383
           L + P +   L  + ++Y  LG+ E+A   LR+A ++D + A+A    G   I  D    
Sbjct: 353 LRLNPQHLSALVNIANLYSNLGRSEEAIPYLRQALELDSKHAKAHF--GMACILEDERKF 410

Query: 384 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA-----------LGD 432
           L A +    +L +  +         +G +H E G  E+A ++F  A              
Sbjct: 411 LQAEQHLCNVLDQEPDNQ--FAWRKLGSVHLESGNPEAALRAFLKASELDPHEPVHYFYL 468

Query: 433 GIWLTLLDSKTKTYVIDASASMLQ------FKDMQLFHRFENDGNHVELPWNK------- 479
           G+    LD           A  LQ        ++ L +  E      E    +       
Sbjct: 469 GVTHQDLDDPRSAETAYLKALHLQPDNASVCNNLGLLYSHEERYAEAERLLREALLHAPE 528

Query: 480 -VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            +  L+NL  +L++I     A  +YR  L    D    +  L     ARN LQ + E + 
Sbjct: 529 DINALYNLGLVLDRIGRFDEAETVYRRALEVSPDDAQIWNNLGLARFARNRLQEAEEALK 588

Query: 539 EALKVNGKYPNALSMLG 555
           EA++ +  YP A   LG
Sbjct: 589 EAVQRDPTYPLAHFNLG 605



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 135/663 (20%), Positives = 264/663 (39%), Gaps = 112/663 (16%)

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG   VE NR  Y ++   Y +AL     C  A+ LG+G+ R++  +  +A + ++ +L+
Sbjct: 26  LGDYYVELNR--YEEAEAHYNQALGYDADCAEAL-LGLGIVRHRQQRYPEAEKYYRASLK 82

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           LD EN   L  L  +    ++     +   +  +A EI P  A+  N             
Sbjct: 83  LDTENSRTLNNLGSL---YHDQERWEEAEREYLKALEIDPDYALPHN------------- 126

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK---EINKPHEFI 297
                                   NL   +  + D+E A   +  +++   E ++ H   
Sbjct: 127 ------------------------NLGLLHARRQDFEGARAAFETAMRLDPEYDQAH--- 159

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
              Y LG +      +  A   +++ L + PD+  T   LG++Y  LG+ E+A++  +++
Sbjct: 160 ---YNLGNLYFDHQKYALAEKAYKESLRLNPDSAFTHHELGNLYHHLGRYEEAEQEFQES 216

Query: 358 AKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 416
             +DP+   A + LG L + +D    A DA   A ++   +     ++  +++ +IHF+ 
Sbjct: 217 LFLDPKLEAAHVSLGNLYVDTDRLNDAEDAINKALSIDSNS-----VDARHSLALIHFQS 271

Query: 417 GEFESAHQ-------------SFKDALGDGI-----WLTLLDSKTKTYVIDASASM---- 454
           G FE A +             SF + LG+ +     +   +++  K + ++    +    
Sbjct: 272 GLFEQAEKEWRACLRREPDNASFYNNLGNSLSSMERYEEAIETYQKAFALEPDNPLPLFN 331

Query: 455 --LQFKDMQLFHRFENDGNH-VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 511
             L ++D+  F   E++  H + L    ++ L N+A L   +  +  A    R  L    
Sbjct: 332 LGLVYEDLDRFQEAEDNYLHALRLNPQHLSALVNIANLYSNLGRSEEAIPYLRQALELDS 391

Query: 512 DYVDAYLRLAAIAK-ARNNLQLSIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKA 567
            +  A+  +A I +  R  LQ    L N    V  + P+   A   LG + L++ +   A
Sbjct: 392 KHAKAHFGMACILEDERKFLQAEQHLCN----VLDQEPDNQFAWRKLGSVHLESGNPEAA 447

Query: 568 KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHT 627
              F  AS+     D +  +   ++ Y      +   P+        A+  Y + +    
Sbjct: 448 LRAFLKASEL----DPHEPV---HYFYLGVTHQDLDDPR-------SAETAYLKALHLQP 493

Query: 628 SNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 687
            N    N  G++ + + ++  ++ L  +    A   +     +   NL  V    G F  
Sbjct: 494 DNASVCNNLGLLYSHEERYAEAERLLREALLHAPEDI-----NALYNLGLVLDRIGRFDE 548

Query: 688 AMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGV 747
           A  +Y+  L       DAQI   L    +   + Q+ +++L  A+   P+     F+ G+
Sbjct: 549 AETVYRRALE--VSPDDAQIWNNLGLARFARNRLQEAEEALKEAVQRDPTYPLAHFNLGL 606

Query: 748 AMQ 750
             +
Sbjct: 607 VYE 609



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 152/355 (42%), Gaps = 26/355 (7%)

Query: 82  EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 141
           +P      G   +     E+A + +   L  D D   ALLG   V   + RY ++ ++Y+
Sbjct: 19  DPDPHCDLGDYYVELNRYEEAEAHYNQALGYDADCAEALLGLGIVRHRQQRYPEAEKYYR 78

Query: 142 RALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 201
            +L++       +   +G   +   +  +A + + +AL++DP+       L ++  +  +
Sbjct: 79  ASLKLDTENSRTLN-NLGSLYHDQERWEEAEREYLKALEIDPDYALPHNNLGLLHARRQD 137

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
             G R   E   R   + P    A   L N +F   ++ L E+  + +L +    P  + 
Sbjct: 138 FEGARAAFETAMR---LDPEYDQAHYNLGNLYFDHQKYALAEKAYKESLRLN---PDSAF 191

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQVQLKLGDFRSA 316
           +++ L   YH  G YE+A   +  S+        F+ P     +  LG + +       A
Sbjct: 192 THHELGNLYHHLGRYEEAEQEFQESL--------FLDPKLEAAHVSLGNLYVDTDRLNDA 243

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
                K L I  ++ +   +L  I+ Q G  E+A++  R   + +P +A  + +LG  L 
Sbjct: 244 EDAINKALSIDSNSVDARHSLALIHFQSGLFEQAEKEWRACLRREPDNASFYNNLGNSLS 303

Query: 377 SSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           S +    A++ ++ A  L  +    +P   L N+G+++ +   F+ A  ++  AL
Sbjct: 304 SMERYEEAIETYQKAFAL--EPDNPLP---LFNLGLVYEDLDRFQEAEDNYLHAL 353



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 140/331 (42%), Gaps = 24/331 (7%)

Query: 47  YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 106
           +Y  LG   +     EE    A + Y KA  ++   P      G +       ++A   +
Sbjct: 294 FYNNLGNSLSSMERYEE----AIETYQKAFALEPDNPLPLFNLGLVYEDLDRFQEAEDNY 349

Query: 107 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
              L  +  ++ AL+  A +  N GR  +++ + ++AL++  S       G+        
Sbjct: 350 LHALRLNPQHLSALVNIANLYSNLGRSEEAIPYLRQALELD-SKHAKAHFGMACILEDER 408

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQA-NEAAGIRKGMEKMQRAFEIYPYCAMA 225
           +  +A Q     L  +P+N  A   L  + L++ N  A +R  +    +A E+ P+  + 
Sbjct: 409 KFLQAEQHLCNVLDQEPDNQFAWRKLGSVHLESGNPEAALRAFL----KASELDPHEPV- 463

Query: 226 LNYLANHFFFTG---QHFLVEQLTETA-LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
                 H+F+ G   Q     +  ETA L   +  P  +    NL   Y  +  Y +A  
Sbjct: 464 ------HYFYLGVTHQDLDDPRSAETAYLKALHLQPDNASVCNNLGLLYSHEERYAEAER 517

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
               ++  ++ P E I   Y LG V  ++G F  A T + + LE+ PD+ +    LG   
Sbjct: 518 LLREAL--LHAP-EDINALYNLGLVLDRIGRFDEAETVYRRALEVSPDDAQIWNNLGLAR 574

Query: 342 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
               ++++A+E L++A + DP    A  +LG
Sbjct: 575 FARNRLQEAEEALKEAVQRDPTYPLAHFNLG 605


>gi|340505437|gb|EGR31764.1| hypothetical protein IMG5_102640 [Ichthyophthirius multifiliis]
          Length = 1411

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 162/348 (46%), Gaps = 28/348 (8%)

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV-HP 148
            G L L K ++  AS  FK +L+ D  NV AL+  A     +G+Y  +++++K A+ +   
Sbjct: 1032 GMLYLKKKDIYNASEQFKKILQIDPKNVNALIEYATSLSLQGQYDKAVQYFKEAVSLDQE 1091

Query: 149  SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
            +  G +RLG  + + KL  L  A + +++ +Q+ PE  +A   L +  ++  E    +K 
Sbjct: 1092 NIVGNLRLG-KIFQNKLNDLDGAIECYKKIIQVQPEFSKAHYQLGLAYIEKKEY---KKA 1147

Query: 209  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
             E++++  +I P  + A   +   F+      +  +  + AL      PT       LA 
Sbjct: 1148 SEELKQTLKINPRFSGAFKAMGLIFYRNANEQIACKYYQKALEC---DPTDMECKVGLAN 1204

Query: 269  SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
             Y+   +++ A  YY   +  I++  E     Y LG      G+   A+++++  ++I P
Sbjct: 1205 CYYLLENFDLAIQYY-EEISNIDQNEEI---EYNLGNCYYMKGEIDEAISHYKNSIDIKP 1260

Query: 329  DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
            D  + L  LG+ +  +   EKA E  +K   I+P ++ A  +L      ++T   L   +
Sbjct: 1261 DKTDCLYNLGNAFCIVQNFEKALECFQKTVDIEPHNSSAIYNL------ANTYYILGEHE 1314

Query: 389  TARTLLKKAGEEVPIEVLNN------IGVIHFEKGEFESAHQSFKDAL 430
             A    +KA +  P    NN      IG + FE+G FE A + ++  +
Sbjct: 1315 LAFIQFEKALDLEP----NNEEWQGYIGGLFFERGNFEKAKKHYEKCV 1358



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 141/343 (41%), Gaps = 44/343 (12%)

Query: 68   ATQYYNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
            A QY  K  +I+    S  V  G G++   +   EQA   FKIV +        LL  A 
Sbjct: 833  AKQYLLKVFQINKQFKSDKVNMGLGEIFELEKNYEQALYHFKIVYKTTDQQQLILLKIAK 892

Query: 126  VEFNRGRYSDSLEFYKRALQVHPS--CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
              +  G  S + + Y+ A++V+     P    L +G  + K G +       Q+A  L P
Sbjct: 893  CFYKIGNISHAQKTYEEAIKVNTKNFLP---YLKLGWMQIKNGDIKLGINNLQKAQSLQP 949

Query: 184  ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI------------------------- 218
            +N E  V L    L  N   GI   +  + +A  I                         
Sbjct: 950  DNFEITVKLGKAYLLLNNEDGIDDAIFHLTKALSIDENDYDCLIGLGKAYEKKGDIDKSI 1009

Query: 219  -YPYCAMAL-NYLAN--HFFFTGQHFL----VEQLTETALAVTNHGPTKSHSYYNLARSY 270
             +   A++L N L N     F G  +L    +   +E    +    P   ++    A S 
Sbjct: 1010 QFTQVAISLPNSLPNINSILFLGMLYLKKKDIYNASEQFKKILQIDPKNVNALIEYATSL 1069

Query: 271  HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV-QLKLGDFRSALTNFEKVLEIYPD 329
              +G Y+KA  Y+  +V   +   E I     LG++ Q KL D   A+  ++K++++ P+
Sbjct: 1070 SLQGQYDKAVQYFKEAV---SLDQENIVGNLRLGKIFQNKLNDLDGAIECYKKIIQVQPE 1126

Query: 330  NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
              +    LG  Y++  + +KA E L++  KI+PR + AF  +G
Sbjct: 1127 FSKAHYQLGLAYIEKKEYKKASEELKQTLKINPRFSGAFKAMG 1169



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 8/128 (6%)

Query: 63   EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPAL 120
            E+F LA QYY + S ID +E   +   G     KGE+++A S +K  I ++ D+ +    
Sbjct: 1210 ENFDLAIQYYEEISNIDQNEEIEY-NLGNCYYMKGEIDEAISHYKNSIDIKPDKTDCLYN 1268

Query: 121  LGQA-CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
            LG A C+  N   +  +LE +++ + + P    AI   +    Y LG+   A   F++AL
Sbjct: 1269 LGNAFCIVQN---FEKALECFQKTVDIEPHNSSAI-YNLANTYYILGEHELAFIQFEKAL 1324

Query: 180  QLDPENVE 187
             L+P N E
Sbjct: 1325 DLEPNNEE 1332



 Score = 40.4 bits (93), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 2/148 (1%)

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           E  L +    P    +YY LA       D + A   Y+  V +INK  +      GLG++
Sbjct: 801 EQCLQIIEQDPINYQAYYRLALFCFDNQDIQGAK-QYLLKVFQINKQFKSDKVNMGLGEI 859

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
                ++  AL +F+ V +        L  +   + ++G I  AQ+   +A K++ ++  
Sbjct: 860 FELEKNYEQALYHFKIVYKTTDQQQLILLKIAKCFYKIGNISHAQKTYEEAIKVNTKNFL 919

Query: 367 AFIDLGELLI-SSDTGAALDAFKTARTL 393
            ++ LG + I + D    ++  + A++L
Sbjct: 920 PYLKLGWMQIKNGDIKLGINNLQKAQSL 947


>gi|407041882|gb|EKE40998.1| TPR repeat protein [Entamoeba nuttalli P19]
          Length = 921

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 173/798 (21%), Positives = 334/798 (41%), Gaps = 119/798 (14%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALEINKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDNICMDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA----GL 281
              L         + +V +    A+   N    K + ++ L R  H K D+ KA     +
Sbjct: 261 AIVLCEAAMKCNNYKVVSEFANIAINYGNEQ-EKIYGHFTLGRIAHQKQDFVKAKEEYNI 319

Query: 282 YYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
            Y++  K        +FP  +Y + QV  +  ++          L+    + + LK LG 
Sbjct: 320 GYLSDTK-------CMFPALHYRMAQVLFREKNYIQVEKILMNCLKYNGGDFDVLKLLGF 372

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 399
             ++L +I +  E L KA+ +   D    + +  LL       AL+ ++    +      
Sbjct: 373 TELKLNKINETIEYLEKAS-VFKVDYTIELIVSSLLEEKQPKKALEHYQRINEI------ 425

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 459
              +EVLNN+G  ++   E   + + F+ AL                 +D  + +     
Sbjct: 426 NSTVEVLNNMGCCYYFIQELIKSKECFEKALN----------------MDKGSEL----- 464

Query: 460 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
                              + T+LFN  R+LE++     A+  Y+ I+ +   Y DA +R
Sbjct: 465 -------------------RTTLLFNKGRVLEEMKLWDEANKCYQEIIKESPWYFDARIR 505

Query: 520 LAAIAKARNNLQL-SIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKAKETFRAAS 575
                       L S ELV   +     +PN   A  +LG++  +      A + F + +
Sbjct: 506 RCYHLWDEKQYNLASQELVQTII----NFPNCEDAKLLLGEMLCQQGKIDDAFKIFNSVT 561

Query: 576 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 635
           +  +  + YA L+L         +  ++ PK     LE  K LY +++    +N+ A  G
Sbjct: 562 NH-NRTNLYAFLALAR----VMAKYGRQDPK---QQLEAVK-LYGKILNADPTNVLALGG 612

Query: 636 AGVVLAEKGQ-------FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 688
             +  AE+         F+V  +   +V +           +V  ++   Y+   N  +A
Sbjct: 613 LALTTAERKDNSSNPIPFNVIIESLQRVNDVCPSY------EVMFSMGTCYYNAHNIQMA 666

Query: 689 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVA 748
             ++++ L +  Y    ++L  LA+  +   ++++  + L RA+ + P +  +       
Sbjct: 667 KSIFESTLNQ--YGEQVEVLNGLAQCEFMLNRYKEALEHLERALKIEPVSQIV-----YN 719

Query: 749 MQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCK 808
            Q  ++  L++ ++     +    +L  +  V  +L   +NL        K+ T  E  K
Sbjct: 720 YQLVASCYLEEQKQKKKLYKEENEQLRQS--VIGYLQQFNNLKY------KMKTFEENWK 771

Query: 809 HLLDAAKIHREAAER-----EEQQNRQ-RQEAARQAALAEEARRKAEEQKKYLLEKRKLE 862
           +L++ A+  +E  +R     EEQ+ R+  +E  R+    E+ +++  E+KK ++EK K E
Sbjct: 772 NLIEQARKDQEEKQRLIKEHEEQRKRKIEEENQRKKEEEEKEQQRRMEEKKMIIEKTKKE 831

Query: 863 DE------QKRLRQQEEH 874
            E      ++RL+  EE+
Sbjct: 832 QEMIGKRIEERLKDVEEN 849



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRG-RYSDSLEF--YKRALQ-VHPSCPG-AIR 155
           +A   +  +L AD  NV AL G A     R    S+ + F     +LQ V+  CP   + 
Sbjct: 591 EAVKLYGKILNADPTNVLALGGLALTTAERKDNSSNPIPFNVIIESLQRVNDVCPSYEVM 650

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
             +G C Y    +  A+  F+  L    E VE L  LA  +   N     ++ +E ++RA
Sbjct: 651 FSMGTCYYNAHNIQMAKSIFESTLNQYGEQVEVLNGLAQCEFMLNRY---KEALEHLERA 707

Query: 216 FEIYPYCAMALNY 228
            +I P   +  NY
Sbjct: 708 LKIEPVSQIVYNY 720


>gi|323449047|gb|EGB04938.1| hypothetical protein AURANDRAFT_72385 [Aureococcus anophagefferens]
          Length = 1937

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 121/283 (42%), Gaps = 52/283 (18%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYER---------IAILNALGVYYTYLGKIE 55
           Y  QGK EQFR+IL  G     D Y     Y R         + +LN L    T     E
Sbjct: 702 YHNQGKREQFREILL-GVVDAFDVYEMQDFYRRQPDLFASGRLRVLNLLAASATSNFIAE 760

Query: 56  TKQREKEE--HFILAT--------QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA 105
             ++E  E   +IL T        +Y  +A +I      TW+ K   L   GE    + A
Sbjct: 761 ELRKEAREALTYILITIAWRQKALEYIGRADKISTSCSQTWLVKA--LFWIGEHHHDAHA 818

Query: 106 FK-------IVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRL 156
            +         L +D   +  A L +A V F+  ++SD+L  Y   L+  P   GA  R+
Sbjct: 819 LRNSAYYADSALRSDNGASCNARLAKAAVLFHECKFSDALRLYASTLRSDPRAAGASARI 878

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--RKGM----- 209
           G+GLC Y LG   KA  A +RAL L    VEALVA+A++ L       I  RKG      
Sbjct: 879 GVGLCAYHLGDKDKALTALERALSLGTTCVEALVAVAILRLDQESDPKIMGRKGTGLLSK 938

Query: 210 --------------EKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
                           + RA E+ P C+MALN+  NH F+  Q
Sbjct: 939 RATAGPVQVINSPGRMLSRARELDPTCSMALNHYGNHLFWLWQ 981



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 128/320 (40%), Gaps = 48/320 (15%)

Query: 478  NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
            N V +  NLA++     D   A  L RL +    + +   L LA +A A  +++ + +  
Sbjct: 1410 NSVPIYLNLAQVHAAAGDLPRARELARLAVALAPNNIRCKLLLARLAFAMRDVEQARKHT 1469

Query: 538  NEALKVN-------------GKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 584
              A+K++             G   ++LS+   +  K +++ +A +T     D       +
Sbjct: 1470 ASAVKISLGLMDGSSGAIFLGLVADSLSVASVMWRKLENYEEALKTLDYLKDLKISNRGF 1529

Query: 585  ATL----SLGNWNYFAALRNEKRA-----PKLEATHLEKAKELYTRVIVQHTSNLYAANG 635
            +T+    +L N ++   +R+ +       P   A  L+ A +     +    S   AA  
Sbjct: 1530 STVYANATLSNLHFRDQIRSGRTGIGDIQPDHRAQQLKNAADCARSALNDDPSCAMAAQA 1589

Query: 636  AGVVLAEKGQFDVSKDLFTQVQE-------AASGSVFV------QMPDVWINLAHVYFAQ 682
             G VL E G+ D S  +F +VQE       A+ G   +       + D  INLAH     
Sbjct: 1590 LGAVLLESGKLDDSMLIFERVQEKLVAGSKASCGDSAIDRDASCSVLDAAINLAHSRLLA 1649

Query: 683  GNFALAMKMYQNCLR--------KFYYNTDAQ-----ILLYLARTHYEAEQWQDCKKSLL 729
            G +  A   Y  C +        K +    AQ     +  +LAR  + A + Q  +++L 
Sbjct: 1650 GKWLEAAANYATCAKVLIAMSAGKMFVPCSAQTRRADVYHWLARACHGANEAQGARRALA 1709

Query: 730  RAIHLAPSNYTLRFDAGVAM 749
             AIHL P N   R    + +
Sbjct: 1710 AAIHLQPGNLAFRCHCAILL 1729



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)

Query: 242  VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            ++ L   A   T     ++ +Y+ L R++H + +++ A  +Y+ + K    PH F    +
Sbjct: 1070 IDDLASRAYHCTAVPEIQAEAYFILGRNHHVRNEFQGALPFYVQACKLW--PH-FALAQF 1126

Query: 302  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             L QV+  + D  +AL   E  LE+ P+  E L+ +G + +     +   E+LR A   +
Sbjct: 1127 RLAQVRAAMNDLPAALEAAEVALELAPNAHEVLRLVGLLRLTQNSTKSPLEVLRHAIAQN 1186

Query: 362  PRDAQAFIDLGELL---ISSDTGA----------ALDAFKTARTLLKKAGEEVPIEVLNN 408
              D   ++ L   L   I +D             A+DA+  A  L  ++   VP ++ NN
Sbjct: 1187 SNDTCTWLALASALERHIFTDDAVHERDPSLVRKAIDAYDNAAKLKWESSSTVPFQISNN 1246

Query: 409  IGVIHFEKGEFESAHQSFKDALGD 432
            +GV+H   GE   A  +F  AL D
Sbjct: 1247 VGVLHLCLGEARPAQSAFLSALHD 1270


>gi|67468967|ref|XP_650475.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
 gi|56467104|gb|EAL45089.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
          Length = 922

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 178/803 (22%), Positives = 331/803 (41%), Gaps = 129/803 (16%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALELNKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDNICMDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA----GL 281
              L         + +V +    A+   N    K + ++ L R  H K D+ KA     +
Sbjct: 261 AIVLCEAAMKCNNYKVVSEFANVAINYGNEQ-EKIYGHFTLGRIAHQKQDFVKAKEEYNI 319

Query: 282 YYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
            Y++  K        +FP  +Y + QV  +  ++          L+    + + LK LG 
Sbjct: 320 GYLSDTK-------CMFPALHYRMAQVLFREKNYIQVEKILMNCLKYNGGDFDVLKLLGF 372

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 399
             ++L +I +  E L KA+ +   D    + +  LL       AL+ ++    +      
Sbjct: 373 TELKLNKINETIEYLEKAS-VFKIDYTIELIVSSLLEEKQPKKALEHYQRINEI------ 425

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 459
              +EVLNN+G  ++   E   + + F+ AL                 +D  + +     
Sbjct: 426 NSTVEVLNNMGCCYYFIQELIKSKECFEKALN----------------MDKGSEL----- 464

Query: 460 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
                              + T+LFN  R+LE++     A+  Y+ I+ +   Y DA +R
Sbjct: 465 -------------------RTTLLFNKGRVLEEMKLWDEANKCYQEIIKENPWYFDARIR 505

Query: 520 LAAIAKARNNLQL-SIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKAKETFRAAS 575
                       L S ELV   +     +PN   A  +LG++  +      A + F + +
Sbjct: 506 RCYHLWDEKQYNLASQELVETII----NFPNCEDAKLLLGEMLCQQGKIDDAFKIFNSVT 561

Query: 576 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 635
           +  +  + YA L+L         +  ++ PK     LE  K LY +++    +N+ A  G
Sbjct: 562 NH-NRTNLYAFLALAR----VMAKYGRQDPK---QQLEAVK-LYGKILNADPTNVLALGG 612

Query: 636 AGVVLAEKGQ-------FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 688
             +  AE+ +       F+V  +   +V +           +V  ++   Y+   N  +A
Sbjct: 613 LALTTAERKENSSNPIPFNVIIESLQRVNDVCPSY------EVMFSMGTCYYNAHNIQMA 666

Query: 689 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS-----NYTLRF 743
             ++++ L +  Y    ++L  LA+  +   ++++  + L RA+ + P      NY L  
Sbjct: 667 KSIFESTLNQ--YGEQVEVLNGLAQCEFMLNRYKEALEHLERALKIEPVSQIVYNYQLVA 724

Query: 744 DAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTH 803
              +  QK      QK +   +E             V  +L   +NL        K+ T 
Sbjct: 725 SCYLEEQK------QKKKLYKEENEQLRQ------NVIGYLQQFNNLKY------KMKTF 766

Query: 804 VEYCKHLLDAAKIHREAAER-----EEQQNRQ-RQEAARQAALAEEARRKAEEQKKYLLE 857
            E  K L++ A+  +E  +R     EEQ+ R+  +E  R+    E+ +++  E+KK ++E
Sbjct: 767 EENWKSLIEQARKDQEEKQRLIKEHEEQRKRKIEEENQRKKEEEEKEQQRRMEEKKMIIE 826

Query: 858 KRKLEDE------QKRLRQQEEH 874
           K K E E      ++RL+  EE+
Sbjct: 827 KTKKEQEMIGKRIEERLKDVEEN 849



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS---LEFYKRALQ-VHPSCPG-AIR 155
           +A   +  +L AD  NV AL G A     R   S +         +LQ V+  CP   + 
Sbjct: 591 EAVKLYGKILNADPTNVLALGGLALTTAERKENSSNPIPFNVIIESLQRVNDVCPSYEVM 650

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
             +G C Y    +  A+  F+  L    E VE L  LA  +   N     ++ +E ++RA
Sbjct: 651 FSMGTCYYNAHNIQMAKSIFESTLNQYGEQVEVLNGLAQCEFMLNRY---KEALEHLERA 707

Query: 216 FEIYPYCAMALNY 228
            +I P   +  NY
Sbjct: 708 LKIEPVSQIVYNY 720


>gi|449707453|gb|EMD47113.1| tetratricopeptide repeatcontaining protein [Entamoeba histolytica
           KU27]
          Length = 922

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 178/803 (22%), Positives = 331/803 (41%), Gaps = 129/803 (16%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALELNKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDNICMDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA----GL 281
              L         + +V +    A+   N    K + ++ L R  H K D+ KA     +
Sbjct: 261 AIVLCEAAMKCNNYKVVSEFANIAINYGNEQ-EKIYGHFTLGRIAHQKQDFVKAKEEYNI 319

Query: 282 YYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
            Y++  K        +FP  +Y + QV  +  ++          L+    + + LK LG 
Sbjct: 320 GYLSDTK-------CMFPALHYRMAQVLFREKNYIQVEKILMNCLKYNGGDFDVLKLLGF 372

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 399
             ++L +I +  E L KA+ +   D    + +  LL       AL+ ++    +      
Sbjct: 373 TELKLNKINETIEYLEKAS-VFKIDYTIELIVSSLLEEKQPKKALEHYQRINEI------ 425

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 459
              +EVLNN+G  ++   E   + + F+ AL                 +D  + +     
Sbjct: 426 NSTVEVLNNMGCCYYFIQELIKSKECFEKALN----------------MDKGSEL----- 464

Query: 460 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
                              + T+LFN  R+LE++     A+  Y+ I+ +   Y DA +R
Sbjct: 465 -------------------RTTLLFNKGRVLEEMKLWDEANKCYQEIIKENPWYFDARIR 505

Query: 520 LAAIAKARNNLQL-SIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKAKETFRAAS 575
                       L S ELV   +     +PN   A  +LG++  +      A + F + +
Sbjct: 506 RCYHLWDEKQYNLASQELVETII----NFPNCEDAKLLLGEMLCQQGKIDDAFKIFNSVT 561

Query: 576 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 635
           +  +  + YA L+L         +  ++ PK     LE  K LY +++    +N+ A  G
Sbjct: 562 NH-NRTNLYAFLALAR----VMAKYGRQDPK---QQLEAVK-LYGKILNADPTNVLALGG 612

Query: 636 AGVVLAEKGQ-------FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 688
             +  AE+ +       F+V  +   +V +           +V  ++   Y+   N  +A
Sbjct: 613 LALTTAERKENSSNPIPFNVIIESLQRVNDVCPSY------EVMFSMGTCYYNAHNIQMA 666

Query: 689 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS-----NYTLRF 743
             ++++ L +  Y    ++L  LA+  +   ++++  + L RA+ + P      NY L  
Sbjct: 667 KSIFESTLNQ--YGEQVEVLNGLAQCEFMLNRYKEALEHLERALKIEPVSQIVYNYQLVA 724

Query: 744 DAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTH 803
              +  QK      QK +   +E             V  +L   +NL        K+ T 
Sbjct: 725 SCYLEEQK------QKKKLYKEENEQLRQ------NVIGYLQQFNNLKY------KMKTF 766

Query: 804 VEYCKHLLDAAKIHREAAER-----EEQQNRQ-RQEAARQAALAEEARRKAEEQKKYLLE 857
            E  K L++ A+  +E  +R     EEQ+ R+  +E  R+    E+ +++  E+KK ++E
Sbjct: 767 EENWKSLIEQARKDQEEKQRLIKEHEEQRKRKIEEENQRKKEEEEKEQQRRMEEKKMIIE 826

Query: 858 KRKLEDE------QKRLRQQEEH 874
           K K E E      ++RL+  EE+
Sbjct: 827 KTKKEQEMIGKRIEERLKDVEEN 849



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS---LEFYKRALQ-VHPSCPG-AIR 155
           +A   +  +L AD  NV AL G A     R   S +         +LQ V+  CP   + 
Sbjct: 591 EAVKLYGKILNADPTNVLALGGLALTTAERKENSSNPIPFNVIIESLQRVNDVCPSYEVM 650

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
             +G C Y    +  A+  F+  L    E VE L  LA  +   N     ++ +E ++RA
Sbjct: 651 FSMGTCYYNAHNIQMAKSIFESTLNQYGEQVEVLNGLAQCEFMLNRY---KEALEHLERA 707

Query: 216 FEIYPYCAMALNY 228
            +I P   +  NY
Sbjct: 708 LKIEPVSQIVYNY 720


>gi|393234352|gb|EJD41916.1| hypothetical protein AURDEDRAFT_145951 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1128

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 157/671 (23%), Positives = 278/671 (41%), Gaps = 134/671 (19%)

Query: 405  VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 464
            ++NN+  +   +G +E+A   ++DAL                   A A+ L         
Sbjct: 521  LVNNVAALRHAEGGYEAARTMYEDAL-------------------AVATALP-------- 553

Query: 465  RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASV-------LYRLILFKYQDYVDAY 517
               ++G  +      V+VL+NL R LE + +   A V       +Y  +L ++ +YVDA 
Sbjct: 554  --SDEGEGI-----SVSVLYNLGRCLEDMEENGIAGVGYGAATEVYNKLLARHPEYVDAK 606

Query: 518  LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKE-TFRAASD 576
            +RLA +    + +  + EL+ +AL  +    N  +   +  L+ + W  A++  F    D
Sbjct: 607  VRLAHMIANTHRMNEAHELLKQALASSPTALNLRAYYTNFLLRVNLWKPARDFAFTTLRD 666

Query: 577  ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT--------HLEKAKELYTRVIVQHTS 628
              D  D YA  + G   Y  A R   R    +A         +  +A E + + + Q  +
Sbjct: 667  -CDKNDVYALCASGIVLYHNA-REAGRGFGGDAPMSSDERKKNFVRACEFFDKALQQDPA 724

Query: 629  NLYAANGAGVVLAEKG-------------QFDVSK------DLFTQVQEAASGSVFVQMP 669
               AA G  V LAE                FD S+      D+F +V+E+ +        
Sbjct: 725  CAVAAQGLAVALAEDALGTLCGALGPPPPSFDPSRAAREALDVFAKVRESLTDGA----- 779

Query: 670  DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 729
             V+ N+ H Y+A+  F  A++ Y+   ++F+   +   LL L+R  Y A+  +D   + +
Sbjct: 780  -VYANMGHCYYARDEFDRAIESYETANKRFFEGRNVANLLCLSRAWY-AKANKDQSFAAM 837

Query: 730  R--------AIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVR 779
            R        A+H  P +  + ++  +  QK +     L+ +RRT  ++R  + + E+A  
Sbjct: 838  RTALKYAQQAMHCTPGDKAIMYNIAMIQQKAAEMLFGLEPSRRTLADLRRAIEQAEHAQS 897

Query: 780  VFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAA 839
            +F+ L AA N  +  +     +    Y   +L          ER E++  ++ +A RQ  
Sbjct: 898  LFASL-AADNSTMLPYSRDIADQRRRYGDTMLRKRVDQLADQERYEEEVGKKYDAVRQRR 956

Query: 840  LA-------------EEARRKAEEQKKYLLEKR---KLEDEQKRLRQQEEHFQRVKEQWR 883
            L              EE +R+AEE    L E+R   K E E+   R Q+E  +  + +  
Sbjct: 957  LEEQQRAAEEERVRQEEMKRRAEE----LAEQRRKAKAEVEEWASRMQDESEEERERRAA 1012

Query: 884  SST---PASKRRERSENDDDEVGHSEKRRRKGGKRRKKDKSSRSHYETEYAEADMMDYRE 940
                   A+   E    +   VG  +KR+R  GK ++  K +R     E A   +     
Sbjct: 1013 KKRQRETAAVAGEDGSAEPAAVGQ-KKRKRPAGKSKRSTKRARGAGGEEDAPGALPS--- 1068

Query: 941  EPEDEDASMNYREPIGQMNDQDDDVEENANDRLAAAGLEDSDVDDEMAPSITAARRRR-- 998
              EDED +M +  P            E A  R+    +   D D++ A + T+ RR++  
Sbjct: 1069 --EDEDEAM-FSPPEA----------EPAPKRVPKKRVIKDDEDEDGAGAATSHRRKKFK 1115

Query: 999  ---ALSESDDD 1006
                +S+SD++
Sbjct: 1116 SKEVISDSDNE 1126



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 22/279 (7%)

Query: 59  REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP 118
           + K +H  LA    N+   +D+ E   ++ +G + LA    E+A   F  +L    +NV 
Sbjct: 117 KTKPQHIDLANGLLNRTGGLDVPETLLFLTRGIVQLAGRSYEEALRTFDGILAKQPNNVV 176

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
           AL G+A + F R +++ +L+ ++R LQ+ P+     R+GIGLC + LG   KAR A+ R+
Sbjct: 177 ALTGRARIYFQRRQFAQALKTFQRVLQLAPNSLPDPRIGIGLCLWSLGAREKARLAWARS 236

Query: 179 LQL-DPENVEALVALAVMDLQANEAAGIRK---------GMEKMQRAFEIYPYCAMALNY 228
           L+L D     ALV L +  + A++   ++          G++ ++ AF++    A A N 
Sbjct: 237 LELHDGTYYPALVLLGLAAVNASKDVRLQPDERAQEYATGIKHVELAFKLNKASAAAANA 296

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHGPTKS---HSYYNLARSYHSKGDYEKAGLYYMA 285
           LA  F   G   L   L  +   +  H  T S     +   AR+ H++G   +A  +Y  
Sbjct: 297 LAEMFLRKGPGALPTALKLSERTI-QHADTLSLLADGHMRAARALHAQGQLAEATKHY-- 353

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
              E   P   I    GL  + ++  ++ +A+   EK+L
Sbjct: 354 ---ERAPP---IIGAVGLAAIHVQTQEYAAAIHVLEKIL 386


>gi|167392599|ref|XP_001740219.1| tetratricopeptide repeat protein [Entamoeba dispar SAW760]
 gi|165895764|gb|EDR23380.1| tetratricopeptide repeat protein, putative [Entamoeba dispar
           SAW760]
          Length = 921

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 136/643 (21%), Positives = 262/643 (40%), Gaps = 84/643 (13%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALELNKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDTICIDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              L         + +  +    A+   N    K + ++ L R  H K D+ KA   Y  
Sbjct: 261 AIVLCEAAMKCNNYKVASEFANIAINYGNEQ-EKIYGHFTLGRIAHQKQDFIKAKEEYNI 319

Query: 286 SVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
           +    NK     FP  +Y + QV  +  ++          L+    + + LK LG   ++
Sbjct: 320 AYLSDNK---CTFPALHYRMAQVLFREKNYIQVEKILMNCLKYNGGDFDVLKLLGFTELK 376

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI 403
           L +I +  E L KA+ +   D +  + +  LL       AL+ ++    +         +
Sbjct: 377 LNKINETIEYLEKAS-VFKIDYKIELIVSSLLEEKQPKKALEHYQRINEV------NSTV 429

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
           EVLNN+G  ++   E   + + F+ AL                 +D  + +         
Sbjct: 430 EVLNNMGCCYYFIQELVKSKECFEKALN----------------MDKGSEL--------- 464

Query: 464 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 523
                          + T+LFN  R+LE++     A+  Y+ I+     Y DA +R    
Sbjct: 465 ---------------RTTLLFNKGRVLEEMKLWDEANKCYQEIIKDNPWYFDARIRRCYH 509

Query: 524 AKARNNLQLSIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKAKETFRAASDATDG 580
                   L+ +   E ++    +PN   A  +LG++  +      A + F + + + + 
Sbjct: 510 LWDEKQYNLASQ---ELVETINNFPNCEDAKLLLGEMLCQQGKIDDAFKIFNSVT-SHNR 565

Query: 581 KDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVL 640
            + YA L+L         +  ++ PK     LE  K LY +++    +N+ A  G  +  
Sbjct: 566 TNLYAFLALAR----VMAKYGRQDPK---QQLEAVK-LYGKILNADPTNVLALGGLALTT 617

Query: 641 AEKGQ-------FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 693
           AE+ +       F+V  +   +V +           +V  ++   Y+   N  +A   ++
Sbjct: 618 AERKETTSNPIPFNVIIESLQRVNDVCPSY------EVMFSMGTCYYNARNIPMAKSTFE 671

Query: 694 NCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAP 736
           + L +  Y    ++L  LA+  +   ++++  + L RA+ + P
Sbjct: 672 STLNQ--YGEQVEVLNGLAQCEFMLNRYKEALEHLERALKIEP 712



 Score = 43.1 bits (100), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRY-SDSLEF--YKRALQ-VHPSCPG-AIR 155
           +A   +  +L AD  NV AL G A     R    S+ + F     +LQ V+  CP   + 
Sbjct: 591 EAVKLYGKILNADPTNVLALGGLALTTAERKETTSNPIPFNVIIESLQRVNDVCPSYEVM 650

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
             +G C Y    +  A+  F+  L    E VE L  LA  +   N     ++ +E ++RA
Sbjct: 651 FSMGTCYYNARNIPMAKSTFESTLNQYGEQVEVLNGLAQCEFMLNRY---KEALEHLERA 707

Query: 216 FEIYPYCAMALNY 228
            +I P   +  NY
Sbjct: 708 LKIEPVSQIVYNY 720


>gi|440301520|gb|ELP93906.1| tpr repeat nuclear phosphoprotein/ctr9, putative [Entamoeba
           invadens IP1]
          Length = 1005

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 167/741 (22%), Positives = 297/741 (40%), Gaps = 104/741 (14%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           FK  LE D +  PA++G A +E   G    +L +YK+A+   P+ P +IR G     Y  
Sbjct: 142 FKRALEIDPNCTPAIVGLALLETKLGNERTALSYYKQAVSQQPTNP-SIRCGAARIFYLQ 200

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
               ++ + F+ AL LD   ++ALV+L+ +         +++ +   +RA  +       
Sbjct: 201 RAFKQSIKCFESALVLDKTCLDALVSLSRIYWNLRTPEAVKRALLFAERALAVDRNNVDV 260

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
           L  L+    F+  +   E+     + + N    K++ ++ L R  H +  +E A   Y+ 
Sbjct: 261 LYVLSEAAMFSKNYKKAEEFCTRIVELGNTA-DKAYGHFTLGRVKHFEKKFEDAMKEYLE 319

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
           + K ++K        + + Q++ K  +++        V++   D+ + LK LG+  ++L 
Sbjct: 320 AEK-MDKDESMPQIRFRIAQLEFKKKEYKKVEDRLLIVVKKISDDFDVLKLLGYSQLKLN 378

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 405
           +   A   L KA+ I   D +  I L  LL  S+   A        ++  +  E    E 
Sbjct: 379 KKSDAIANLSKASLIKT-DEKVEITLAMLLEESEPRHA--------SMHYEKIENKNEEA 429

Query: 406 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHR 465
           LNNIG  ++   E+E+A + F+ A   G                ASA             
Sbjct: 430 LNNIGCCYYFMKEYETALKWFEKAESTG---------------KASA------------- 461

Query: 466 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 525
                          T LFN +R +E +     A   YR +L     Y D ++R++    
Sbjct: 462 ---------------TTLFNKSRCIEALGRWDEAEKEYRKVLVTTPWYFDCHIRISYHYW 506

Query: 526 ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDS-- 583
                 L+   + EA+K   K  +A  +LG   +K + W K +E  +          S  
Sbjct: 507 DLGRYDLASHELVEAIKSYPKCEDAKVLLG--VMKTEKW-KLEEAMKLFESVIQENRSNL 563

Query: 584 YATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE- 642
           YA L + N  Y+   +N + A K       +A ELY +++    +N+ A NG  + L + 
Sbjct: 564 YAFLGMANV-YYKFGKNNENAKK-------RAVELYMKILKHDVTNIQALNGLAMCLVDI 615

Query: 643 -KGQFDVSKDLFTQVQEAASGSVFVQMPD--VWINLAHVYFAQGNFALAMKMYQNCLRKF 699
               +    DL  ++    +     + P+  V  +L  + F  GN+  A   +    +  
Sbjct: 616 KVDNYVPPIDLICKILAKTNE----EQPNKKVAFSLGTLQFYLGNYPTAEATFTYICKT- 670

Query: 700 YYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSN---YTLRFDAGVAMQKF-SAS 755
            Y  D  +L  +A   + + +++   KSL RA  ++ +    Y   + A V   +  + S
Sbjct: 671 -YGDDPTVLNSIAECQFVSGKFEQALKSLERAHEVSDTADIAYNYAYVAWVYFDRIINTS 729

Query: 756 TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL--HLHGFDEK---KINTHVEYCKHL 810
            L K          T+ E     +   +L   S+L      F+EK    I   V   K  
Sbjct: 730 ALGKKES------ETIFE-----KSLKYLEGKSDLVDFTTKFEEKWKANIEKAVREEKEK 778

Query: 811 LDAAKIHREAAEREEQQNRQR 831
           +D  K      E EE++  +R
Sbjct: 779 VDKRK------ELEEKRRLER 793


>gi|330506685|ref|YP_004383113.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328927493|gb|AEB67295.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 705

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 166/377 (44%), Gaps = 27/377 (7%)

Query: 59  REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP 118
           R   E +  + Q +++A +I+ H+  T +GKG LLLA+G    A  ++   L   +DNV 
Sbjct: 260 RYATEDYSSSLQAFDQALKINPHDIQTILGKGDLLLARGNFSSALESYSAALLLKKDNVS 319

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
           AL G+     + GR  ++ + Y+R L++ P    A++  I     +  +  +A + +   
Sbjct: 320 ALYGKGLALSSLGREKEANKCYRRILELEPDNIIALQ-KIADDLLERNESIQAAEHYGLI 378

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           L  DP+N  AL+ +A   L           +  + +A + Y       +  +  +   G+
Sbjct: 379 LGQDPKNARALLGMAKAQLD----------LGDLDQALQSYEELLGHDSNSSAAWIGRGE 428

Query: 239 HFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
             L++   + A+   N      P    +   LA + H KG  E+A  YY A++ E  +P 
Sbjct: 429 ILLLQTNIDPAIESFNRALDIEPQNPDALMGLAEALHQKGRLEEARSYYEAAIAE--EPS 486

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
             +  Y GLG +    G++  ++  FE  L   P + E+L   G      G    A +  
Sbjct: 487 --VRGYRGLGNILCAQGEYGQSIPLFESALSQEPSDTESLMGKGLALAATGNSSGALQCF 544

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG--EEVPIEVLNNIGVI 412
            +   ++P D+ A+ + G +       AAL  +  AR  L+KA        ++  N+G +
Sbjct: 545 NEIVSLNPEDSAAWSNRGSIF------AALGRYDEARESLQKAAGISSSSADIWYNLGQV 598

Query: 413 HFEKGEFESAHQSFKDA 429
           +        + Q+F++A
Sbjct: 599 YRLMDRHNQSRQAFENA 615



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/297 (20%), Positives = 135/297 (45%), Gaps = 11/297 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q Y +    D +  + W+G+G++LL +  ++ A  +F   L+ +  N  AL+G A   
Sbjct: 405 ALQSYEELLGHDSNSSAAWIGRGEILLLQTNIDPAIESFNRALDIEPQNPDALMGLAEAL 464

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
             +GR  ++  +Y+ A+   PS  G   LG  LC    G+ G++   F+ AL  +P + E
Sbjct: 465 HQKGRLEEARSYYEAAIAEEPSVRGYRGLGNILCAQ--GEYGQSIPLFESALSQEPSDTE 522

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           +L+   +       ++G    ++       + P  + A +   + F   G++    +  +
Sbjct: 523 SLMGKGLALAATGNSSG---ALQCFNEIVSLNPEDSAAWSNRGSIFAALGRYDEARESLQ 579

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            A  +++   + +  +YNL + Y     + ++   +  + +    P + +  +  LG  Q
Sbjct: 580 KAAGISS---SSADIWYNLGQVYRLMDRHNQSRQAFENATRL--SPDDPVL-WLELGLAQ 633

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
            + G+ + AL + ++ + + P N     +L       G+ ++A +   +  +I+P++
Sbjct: 634 ERTGEAKLALKSLQRAVVLDPKNEFAQYSLALALAGQGRFQEALQAFERVLEINPKN 690



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 161/380 (42%), Gaps = 40/380 (10%)

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR--DNVPALLG 122
           + LA +  N +  ID      W+ KG++L   G +++A  +   VL  D+  D   +L G
Sbjct: 62  YPLALERINLSLEIDDELAEAWLLKGRILFGLGYLQEAIRSLDQVLRIDQSLDEAWSLKG 121

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL--GIGLCRYKLGQLGKARQAFQRALQ 180
           +  +E   GRY  +   +  AL++    PG + L   +   +  L     A +++++AL 
Sbjct: 122 EIMME--TGRYRMAQLCFDSALRLD---PGNMTLYNRLAQSQLMLEDYDHALRSYKKALS 176

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+  N E L     + L     A   + +       E      +AL   A  +   GQ  
Sbjct: 177 LEANNTEILFNQGDLFLT---LARYPEALNSFNLLLEQNKSDILALKGRAECYRQLGQ-- 231

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            V++  E    V    P    S+  L    ++  DY  +   +  ++K IN PH+ I   
Sbjct: 232 -VDRAEEDYYTVLEKNPEDFESWRGLGMVRYATEDYSSSLQAFDQALK-IN-PHD-IQTI 287

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            G G + L  G+F SAL ++   L +  DN   L   G     LG+ ++A +  R+  ++
Sbjct: 288 LGKGDLLLARGNFSSALESYSAALLLKKDNVSALYGKGLALSSLGREKEANKCYRRILEL 347

Query: 361 DPRDAQAFIDLG-ELLISSDTGAALDAF--------KTARTLLKKAGEEVPIEVLNNIGV 411
           +P +  A   +  +LL  +++  A + +        K AR LL  A  ++ +        
Sbjct: 348 EPDNIIALQKIADDLLERNESIQAAEHYGLILGQDPKNARALLGMAKAQLDL-------- 399

Query: 412 IHFEKGEFESAHQSFKDALG 431
                G+ + A QS+++ LG
Sbjct: 400 -----GDLDQALQSYEELLG 414



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 120/560 (21%), Positives = 219/560 (39%), Gaps = 65/560 (11%)

Query: 236 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
           TG++ + +   ++AL +    P     Y  LA+S     DY+ A   Y  ++       E
Sbjct: 127 TGRYRMAQLCFDSALRLD---PGNMTLYNRLAQSQLMLEDYDHALRSYKKALSLEANNTE 183

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
            +F     G + L L  +  AL +F  +LE    +   LK     Y QLGQ+++A+E   
Sbjct: 184 ILF---NQGDLFLTLARYPEALNSFNLLLEQNKSDILALKGRAECYRQLGQVDRAEEDYY 240

Query: 356 KAAKIDPRDAQAFIDLGELLISS-DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
              + +P D +++  LG +  ++ D  ++L AF  A   LK    +  I+ +   G +  
Sbjct: 241 TVLEKNPEDFESWRGLGMVRYATEDYSSSLQAFDQA---LKINPHD--IQTILGKGDLLL 295

Query: 415 EKGEFESAHQSFKDAL-----------GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
            +G F SA +S+  AL           G G+ L+ L  + +          L+  ++   
Sbjct: 296 ARGNFSSALESYSAALLLKKDNVSALYGKGLALSSLGREKEANKCYRRILELEPDNIIAL 355

Query: 464 HRFEND----------GNHVEL-----PWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 508
            +  +D            H  L     P N    L  +A+    + D   A   Y  +L 
Sbjct: 356 QKIADDLLERNESIQAAEHYGLILGQDPKN-ARALLGMAKAQLDLGDLDQALQSYEELLG 414

Query: 509 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 568
              +   A++    I   + N+  +IE  N AL +  + P+AL  L +   +     +A+
Sbjct: 415 HDSNSSAAWIGRGEILLLQTNIDPAIESFNRALDIEPQNPDALMGLAEALHQKGRLEEAR 474

Query: 569 ETFRAASDATDGKDSYATL-----SLGNWN-----YFAALRNEK--------RAPKLEAT 610
             + AA         Y  L     + G +      + +AL  E         +   L AT
Sbjct: 475 SYYEAAIAEEPSVRGYRGLGNILCAQGEYGQSIPLFESALSQEPSDTESLMGKGLALAAT 534

Query: 611 -HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 669
            +   A + +  ++  +  +  A +  G + A  G++D +++   +    +S S      
Sbjct: 535 GNSSGALQCFNEIVSLNPEDSAAWSNRGSIFAALGRYDEARESLQKAAGISSSSA----- 589

Query: 670 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 729
           D+W NL  VY        + + ++N  R      D  + L L        + +   KSL 
Sbjct: 590 DIWYNLGQVYRLMDRHNQSRQAFENATR--LSPDDPVLWLELGLAQERTGEAKLALKSLQ 647

Query: 730 RAIHLAPSNYTLRFDAGVAM 749
           RA+ L P N   ++   +A+
Sbjct: 648 RAVVLDPKNEFAQYSLALAL 667


>gi|452824639|gb|EME31640.1| hypothetical protein Gasu_10260 [Galdieria sulphuraria]
          Length = 1007

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 235/1029 (22%), Positives = 402/1029 (39%), Gaps = 220/1029 (21%)

Query: 7   KQGKVEQFRQILEEG---SSPEIDEYYADVRYERIAILNAL-GVYYTYLG--------KI 54
           K+ K+E+ + +LEE    SS    E +   + E +A+   L G Y   +         K 
Sbjct: 26  KEQKLEECKTVLEEALLNSSRNPSELFD--QKEVVALRERLTGCYLMLIATGRQNARTKE 83

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----VEQASSAFKIV 109
           +T+++  E+   L +Q+    S I + E   W    ++L  + E      EQ SSA K +
Sbjct: 84  DTQKQISEQIAFLHSQF---GSTIRLQELQGW---KEILGERYESALRCFEQISSAPKSL 137

Query: 110 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
           L +        +G A  +F +G   DSLE +   ++    C  A  LGI  C  + G   
Sbjct: 138 LSS--------IGSATAKFYKGDIQDSLESFGSIVRRWRRCESAW-LGIARCYLEKGDHK 188

Query: 170 KARQAFQRALQLDPE---------NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
           KA+ A  + ++   +         + EA +++A +        G+  G+  ++  +    
Sbjct: 189 KAQMALSKTIEFAKQKSTGFSSFFSYEAQLSIAYIAFGQGTKEGVEAGLSILKELYRDNT 248

Query: 221 YCAM----ALNYLANHFFFTGQHFLVEQL-TETALAVTNHGPTKSHSYYNLARSYHSKGD 275
             A      +N LA + F+  ++     L  +  L  T     K  S + LAR  H  G+
Sbjct: 249 NDAQNDPRVVNRLAEYLFYRKEYKRASALLCKLNLTQTIFPRAKGESLFQLARLAHVSGE 308

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG-------DFRSALTNFEKVLEIYP 328
             +A  +Y  ++ E           YGL Q +L L        DF++A    E+V+   P
Sbjct: 309 LAEAENFYTQALLEDG---------YGLPQARLALANLYLSREDFQAAADCLERVISQRP 359

Query: 329 DNCETLKALGHIYV---------QLGQIEKAQEL-LRKA--------------AKIDPRD 364
           +  E    LG I            +GQ EK  +  LR+A              A I P D
Sbjct: 360 ECLEAKATLGIILTLFEMKNLDTTIGQEEKLTKYELRRARREKAISLLTEFVDATITP-D 418

Query: 365 AQAFIDLGEL----------LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
             A + L  L          L+  D+    D  +    ++ +    V I + NNI  +  
Sbjct: 419 ILALVCLAYLFEENKPERACLLLEDSLRLFD--EQPNIIIARNSPSVKIRLQNNIASLLT 476

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 474
             G +  A +         I+    D  +  Y            D  +F   +N   + E
Sbjct: 477 RIGRYSEAEKVL-----STIFNIYTDLSSGDY------------DEDVF--LQNIQKYNE 517

Query: 475 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
           +P   + +L+N A + E     V A  LY  I+  Y +Y DA  RL  ++ A ++   + 
Sbjct: 518 IP---ILLLYNQALVWELEGKMVLARTLYSHIISVYGEYPDALFRLGYLSYANDDFVAAK 574

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET---------FRAASDATDGKDSYA 585
           E      K   K  + L  L  L     D+ K +           F    +A D  D Y+
Sbjct: 575 EFYERGAKFKPKLASHL--LATLARSQGDYHKYQSLLEQALQSRQFNETREALD--DDYS 630

Query: 586 TLSLGNWNYFAALR--NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 643
            + L N+ Y   L+  +E+R  K     ++K  EL  RV+  +  N +AAN  G+ ++ +
Sbjct: 631 FVRLCNF-YIDCLQVVDERRQRKF----MDKCLELLQRVLSHYPYNAFAANAFGIYVSLR 685

Query: 644 GQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF------------------AQGNF 685
             +  ++++F        G+   +M    +NLAH+                    A  + 
Sbjct: 686 EMYSDAREIF----HGLVGTPAAEMAK--LNLAHIQVHLARNLLHSSGERQIVRNAAADT 739

Query: 686 AL--AMKMYQNCLRKFYY-NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLR 742
           AL  A+K+Y++ L +     T  +++LYL+  ++E   + +  + L R +H  P    L 
Sbjct: 740 ALSSAIKLYEDSLLQTRNEETRCEMMLYLSLANFEKAHFSEACRLLTRLLHRMPMYLPLW 799

Query: 743 FDAGVAMQKF---------------SASTLQKTRRTADEVRSTVAELENAVRVF------ 781
           F+  + +++                S S    +       R   AE   A R+F      
Sbjct: 800 FNWALTLEECGLRRINEVGEKQKIASVSENASSLNGVHNARKAAAEFGRAYRIFQVLSRR 859

Query: 782 ------------SHLSAASNLHLHGFDE-KKINTHVEYCKHLLDAAKIHREAAEREEQQN 828
                       +H S  ++ H H F + K+  ++V     L +A K + E  ER +++ 
Sbjct: 860 KLSADGEGIVRQTHSSRLADAH-HTFAKAKRATSNV----LLANAEKEYVEQTERYQERQ 914

Query: 829 RQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDE---QKRLRQQEEHFQRVKEQWRSS 885
           R  QE   Q    EE  R   EQ++        E E   Q+ L+++EEH +R  E+    
Sbjct: 915 RILQEKLAQ----EEKERLEREQRRKEELAALEERELKFQESLKEKEEH-KRTAER---E 966

Query: 886 TPASKRRER 894
           T + KRR +
Sbjct: 967 TVSRKRRRK 975


>gi|359409222|ref|ZP_09201690.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
           proteobacterium HIMB100]
 gi|356675975|gb|EHI48328.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
           proteobacterium HIMB100]
          Length = 727

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 147/355 (41%), Gaps = 32/355 (9%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
           TW   G + L  G    A SAFK  L+ +  +       A  E+  G    +L F+K A 
Sbjct: 54  TWNFLGDVSLTLGNSTDALSAFKTALKLNPSDARVNKNLAITEYMLGNNEKALNFFKIAS 113

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
            + P  P      IG     LG +  A  A++  + L+P++ EA   L    L   E   
Sbjct: 114 SLSPKDPDN-HFNIGNILRDLGDINGAISAYKHCIALNPKDSEAYNNLGTALLSDGE--- 169

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           I K +   ++A ++ P    A N L   F +  +    E+    AL +    P   +S +
Sbjct: 170 INKAIIAYEKAIQLVPSDPNAHNNLGLCFHYQKRFKEAEEKYNEALRL---NPKSINSLF 226

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           NL   Y  K ++ +A  Y+  +++     H     +  LG    ++GD   A+  ++  +
Sbjct: 227 NLGNVYLEKKNFLRAIQYFGQTIQIDPNAHN---AFNNLGLCLAQIGDNTKAIQAYKNSI 283

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAA 383
            I P+N      LG+ Y  + + EKA E  +    IDP +A    DLG LL  +D    A
Sbjct: 284 SINPNNSNVHFNLGNAYRDVNRNEKAIESYKNGLAIDPLNAVYLNDLGILLAENDRVDEA 343

Query: 384 LDAFKT--------ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           L A++         ART L             NIG ++    E E+A  ++  AL
Sbjct: 344 LSAYQASLDITGGDARTFL-------------NIGNLYKNNNEIENAISAYNKAL 385



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 131/308 (42%), Gaps = 10/308 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  ++  AS +   +P      G +L   G++  A SA+K  +  +  +  A        
Sbjct: 105 ALNFFKIASSLSPKDPDNHFNIGNILRDLGDINGAISAYKHCIALNPKDSEAYNNLGTAL 164

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + G  + ++  Y++A+Q+ PS P A    +GLC +   +  +A + +  AL+L+P+++ 
Sbjct: 165 LSDGEINKAIIAYEKAIQLVPSDPNAHN-NLGLCFHYQKRFKEAEEKYNEALRLNPKSIN 223

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           +L  L  + L   E     + ++   +  +I P    A N L       G +    Q  +
Sbjct: 224 SLFNLGNVYL---EKKNFLRAIQYFGQTIQIDPNAHNAFNNLGLCLAQIGDNTKAIQAYK 280

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            ++++    P  S+ ++NL  +Y      EKA   Y   +     P   ++    LG + 
Sbjct: 281 NSISI---NPNNSNVHFNLGNAYRDVNRNEKAIESYKNGLAI--DPLNAVY-LNDLGILL 334

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            +      AL+ ++  L+I   +  T   +G++Y    +IE A     KA K+    A  
Sbjct: 335 AENDRVDEALSAYQASLDITGGDARTFLNIGNLYKNNNEIENAISAYNKALKLKMDYADV 394

Query: 368 FIDLGELL 375
           +  L  L+
Sbjct: 395 YKQLSSLI 402



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 129/323 (39%), Gaps = 48/323 (14%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG V L LG+   AL+ F+  L++ P +    K L      LG  EKA    + A+ + P
Sbjct: 58  LGDVSLTLGNSTDALSAFKTALKLNPSDARVNKNLAITEYMLGNNEKALNFFKIASSLSP 117

Query: 363 RDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE---------------------- 399
           +D     ++G +L    D   A+ A+K    L  K  E                      
Sbjct: 118 KDPDNHFNIGNILRDLGDINGAISAYKHCIALNPKDSEAYNNLGTALLSDGEINKAIIAY 177

Query: 400 EVPIEVL-------NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 452
           E  I+++       NN+G+    +  F+ A + + +AL        L+ K+   + +   
Sbjct: 178 EKAIQLVPSDPNAHNNLGLCFHYQKRFKEAEEKYNEALR-------LNPKSINSLFNLGN 230

Query: 453 SMLQFKD----MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 508
             L+ K+    +Q F      G  +++  N      NL   L QI D   A   Y+  + 
Sbjct: 231 VYLEKKNFLRAIQYF------GQTIQIDPNAHNAFNNLGLCLAQIGDNTKAIQAYKNSIS 284

Query: 509 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 568
              +  + +  L    +  N  + +IE     L ++      L+ LG L  +ND   +A 
Sbjct: 285 INPNNSNVHFNLGNAYRDVNRNEKAIESYKNGLAIDPLNAVYLNDLGILLAENDRVDEAL 344

Query: 569 ETFRAASDATDGKDSYATLSLGN 591
             ++A+ D T G D+   L++GN
Sbjct: 345 SAYQASLDITGG-DARTFLNIGN 366


>gi|71660685|ref|XP_822058.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70887451|gb|EAO00207.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 912

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 138/599 (23%), Positives = 246/599 (41%), Gaps = 66/599 (11%)

Query: 80  MHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           +H P     +G   +A G  ++ A   F+  + ADR  V A LG A V ++  RY     
Sbjct: 79  LHRPVLLYLEGLAAMASGTSLQTARVKFEEAIRADRYFVLARLGLAAVSYHMKRYKRCFS 138

Query: 139 FYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL--DPENVEALVALAVM 195
            Y+  L+ +  SCP  +R+G+GLC Y L  L  A++  +RAL++  D E    ++ +  +
Sbjct: 139 HYRVVLETLGSSCPPIVRVGMGLCAYHLNHLDYAQRCLERALEVNEDDELALLVLLVVFL 198

Query: 196 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
           D +      I K +E  QR   I P  A  L  +A   +F               AVT  
Sbjct: 199 DRRQ-----IPKVIEVAQRLRGILPENATVLLKVAELVYFR--------------AVTQ- 238

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
              +  +  N  R               +A V+ +    E     Y  G++ L LGD  +
Sbjct: 239 --DRVKASANPIRR-------------LLAEVRRVATVEESAMADYQEGRLCLALGDLSN 283

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           A    E  +++ P+            +  G+  +A++LL +  K  P   +    L   +
Sbjct: 284 ARLLLESAMQVLPNLLAARIHYARFLLLSGRETEAEQLLLRINKDHPNHKEVLQLLA--V 341

Query: 376 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLN-NIG--VIHFEKGE---FESAHQSFKDA 429
            +S  G    A + +R L +      P ++ + +I       +KGE     S     +  
Sbjct: 342 YASRHGLHEKALEYSRRLTEIVA---PGDIRSWSIASWCARLDKGETKKLMSHLARIRKE 398

Query: 430 LGDGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 488
           +G+ + + L+        +      LQ   D +L   F  + N   LP   V ++FNLA 
Sbjct: 399 VGEPVSMKLM---ANIAALGGDTEALQRIIDCELGADFLGEPN---LPVVYVPLVFNLAL 452

Query: 489 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 548
           LLE+  D   A  LY  ++ ++  +   Y+RL  +AK    L+ ++  +    +V  + P
Sbjct: 453 LLEET-DRTRARQLYIFLVKQHGYFRPPYIRLHVLAKDDGFLKQAVAWLVLLQQVLPEDP 511

Query: 549 NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 608
            +L+ +G++  +N     A    R+A     G+     L+ G    + + ++ K   +  
Sbjct: 512 TSLASIGEIFFENGRVGAAMTALRSAR----GRPLPVALAFGAAFLWCSQQHGKDNRRF- 566

Query: 609 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 667
              L  AK+ +  V+ +   N+ AA+G    L  +  +D  + L  +V E      +V+
Sbjct: 567 ---LASAKDRFAFVLRRDNGNVLAAHGLACCLGLEADYDRCQCLLDRVGEVRPNCSYVR 622


>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
 gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
          Length = 949

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 148/659 (22%), Positives = 256/659 (38%), Gaps = 92/659 (13%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           E + LA  Y NK+  ID   P  W  KG +L   G +++A S F   LE D  +      
Sbjct: 39  ESYDLALLYVNKSLDIDPAYPDAWSLKGYILSDLGRLDEALSCFNRSLEIDPQDPHIWYS 98

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +  V +  G Y ++++ Y RA++ + + P   R   GL  Y LG+  +A +++  A+  D
Sbjct: 99  KGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWR-ARGLALYSLGRYEEAVRSYDEAIVFD 157

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC-------AMALNYLANHFFF 235
           P         A  DL   +   +  G+ + ++A E Y +        A + +  A   + 
Sbjct: 158 P---------AQGDLWYQKGLAL-CGLGRYEKAIESYDFAITIDGDDAASWHGKALALYS 207

Query: 236 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
            G+    E+  +      +  P+ +  +YN   + ++ G +E+A   Y A+V+     H 
Sbjct: 208 LGR---AEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHP 264

Query: 296 FIF----PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
             F     +Y LG+V+        A+  +++ ++I P         G+    LG+ ++AQ
Sbjct: 265 AWFNKGLAFYSLGRVE-------EAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEAQ 317

Query: 352 ELLRKAAKIDPRDAQAFIDLGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIG 410
           E  R+A +IDP  +  + +LG +L     G  AL+A+     +          E   N G
Sbjct: 318 ECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDRLIEIDPNLS-----EAWYNRG 372

Query: 411 VIHFEKGEFESAHQSFKDAL------GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 464
           +  +  G ++ A   +   L      GD +W    D       +      L   D  L  
Sbjct: 373 LALYSLGRYDEAAGCYDRVLEIDPENGD-VW---YDKALALGSLGRYEEALDCYDEAL-- 426

Query: 465 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
             E      E+  N+  +L++L R                     Y + V  Y  +  I 
Sbjct: 427 --EAGPRRPEVLNNRCNILYSLER---------------------YNESVGCYGDVIGID 463

Query: 525 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN----DDWVKAKETFRAAS---DA 577
               N   +  +   AL   G+Y  A +  G+    N    D WV   + F AA     A
Sbjct: 464 PGYENAWYNRGV---ALYTLGRYEEASASYGEAAALNGSRVDAWVGMGDAFAAAGIYDRA 520

Query: 578 TDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAG 637
            +  D    L  G+     A+   +      A+ LE+A E +  VI    S        G
Sbjct: 521 VEAYDGAIALYPGD----PAVWYNRGLLLYNASRLEEAVESFDEVIEIDPSYEGVWRLKG 576

Query: 638 VVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
           + L   G+ D + D + +  E +   V      +W N   V F+ G +  A++ Y   +
Sbjct: 577 LALYALGRSDEAIDCYDEALEISPSEV-----SLWYNRGVVLFSLGRYGEAIESYDRVI 630



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 176/465 (37%), Gaps = 96/465 (20%)

Query: 25  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 84
           EID  Y++  Y        LGV    LG+ E            A + Y++   ID +   
Sbjct: 325 EIDPEYSNPWYN-------LGVVLQRLGRGEE-----------ALEAYDRLIEIDPNLSE 366

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W  +G  L + G  ++A+  +  VLE D +N      +A    + GRY ++L+ Y  AL
Sbjct: 367 AWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCYDEAL 426

Query: 145 QVHP-----------------------SCPGAIRLGI-----------GLCRYKLGQLGK 170
           +  P                        C G + +GI           G+  Y LG+  +
Sbjct: 427 EAGPRRPEVLNNRCNILYSLERYNESVGCYGDV-IGIDPGYENAWYNRGVALYTLGRYEE 485

Query: 171 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYL 229
           A  ++  A  L+   V+A V +      A  AAGI  + +E    A  +YP    A+ Y 
Sbjct: 486 ASASYGEAAALNGSRVDAWVGMG----DAFAAAGIYDRAVEAYDGAIALYP-GDPAVWYN 540

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHGPT-------KSHSYYNLARSYHSKGDYEKA--- 279
                +      +E+  E+   V    P+       K  + Y L RS  +   Y++A   
Sbjct: 541 RGLLLYNASR--LEEAVESFDEVIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEI 598

Query: 280 -----GLYYMASVK--EINKPHEFIFPY--------YGLGQVQLKLGDFRSALTNFEKVL 324
                 L+Y   V    + +  E I  Y        Y  G+    LG +  A+  +EKVL
Sbjct: 599 SPSEVSLWYNRGVVLFSLGRYGEAIESYDRVIELDRYEKGEALYSLGRYDEAIECYEKVL 658

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAA 383
           E+ P   +     G  +  LG  E++ E   +  +IDP   +  +  G +L+   D   A
Sbjct: 659 EVSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGA 718

Query: 384 LDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 426
           L ++  A        +E P  +E     G      G FE A  +F
Sbjct: 719 LASYDLAL-------QEDPDDLEAARGRGEALLALGRFEEASATF 756



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 88  GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH 147
           G+G+ LLA G  E+AS+ F  +L    ++  A  G+        RY ++++ Y RA+ ++
Sbjct: 738 GRGEALLALGRFEEASATFDRILANASEDGGAWHGRGLALAGLLRYDEAIDSYDRAIAIN 797

Query: 148 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
            S    + +G G    + G+L  A  +F RA+ LD E+ EA
Sbjct: 798 -SSDNLLWIGRGGVLEEAGRLEDAVASFDRAIALDQEDPEA 837



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 1/120 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y++A  I+  +   W+G+G +L   G +E A ++F   +  D+++  A   +    
Sbjct: 786 AIDSYDRAIAINSSDNLLWIGRGGVLEEAGRLEDAVASFDRAIALDQEDPEAWSMRGRAL 845

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GR  D+   + RA+ + PS   A R G G      G+  +A   ++ A+ LDP   E
Sbjct: 846 MKAGRLEDAAASFDRAIALDPSSGEAQR-GRGSVFEAQGRAEEAIGCYEAAIALDPPTPE 904


>gi|124022005|ref|YP_001016312.1| hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT
            9303]
 gi|123962291|gb|ABM77047.1| Hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT
            9303]
          Length = 1676

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 163/727 (22%), Positives = 281/727 (38%), Gaps = 74/727 (10%)

Query: 74   KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
            K+  +    P T +  G +    G ++QA ++    LE   DN  A +    +  + G  
Sbjct: 432  KSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNL 491

Query: 134  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
              +L    ++L++ P  P A  + +G     LG L +A  +  ++L+L P+N + L+ L 
Sbjct: 492  DQALASTLKSLELKPDNPTA-HMNLGGIYQDLGNLDQALASTLKSLELQPDNPDTLINLG 550

Query: 194  VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
             +     +   + + +    ++ E+ P     L  L   +   G    ++Q   + L   
Sbjct: 551  GI---YKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGN---LDQALASTLKSL 604

Query: 254  NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGD 312
               P    ++ NL   Y   G+ ++A    + S++ + + P   I     LG +   LG+
Sbjct: 605  ELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPDTLI----NLGGIYKDLGN 660

Query: 313  FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
               AL +  K LE+ PDN +TL  LG IY  LG +++A     K+ ++ P +  A I+LG
Sbjct: 661  LDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTALINLG 720

Query: 373  ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 432
               I  D G    A  +    L+   +    ++  N+G I+ + G  + A  S   +L  
Sbjct: 721  G--IYQDLGNLDQALASTLKSLELKPDNPTAQM--NLGGIYKDLGNLDQALASTLKSLE- 775

Query: 433  GIWLTLLDSKTKTYVIDASASMLQFKDM-QLFHRFENDGNHVELPWNKVTVLFNLARLLE 491
                  L     T  ++       +KD+  L     +    +EL  +  T   NL  + +
Sbjct: 776  ------LKPDNPTAHMNLGGI---YKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYK 826

Query: 492  QIH--DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 549
             +   D   AS L  L L    D  D  + L  I K   NL  ++    ++L++    P+
Sbjct: 827  DLGNLDQALASTLKSLEL--KPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPD 884

Query: 550  ALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLS-----LGNWNYFAA--LRN 600
             L  LG +  +L N D   A  T ++     D  D+   L      LGN +   A  L++
Sbjct: 885  TLINLGGIYKDLGNLDQALA-STLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKS 943

Query: 601  EKRAPKLEAT------------HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV 648
             +  P    T            +L++A     + +     N  A    G +  + G  D 
Sbjct: 944  LELKPDNPDTLINLGGIYKDLDNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLD- 1002

Query: 649  SKDLFTQVQEAASGSVFVQM----PDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 704
                    Q  AS    +++    PD  INL  +Y   GN   A+      L     N D
Sbjct: 1003 --------QALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPD 1054

Query: 705  AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS------ASTLQ 758
               L+ L   + +         S L+++ L P N     + G   Q         ASTL+
Sbjct: 1055 T--LINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYQDLGNLDQALASTLK 1112

Query: 759  KTRRTAD 765
                  D
Sbjct: 1113 SLELQPD 1119



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 152/661 (22%), Positives = 259/661 (39%), Gaps = 66/661 (9%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G ++QA ++    LE   DN  A +    +  + G    +L    ++L++ P  P A  +
Sbjct: 149 GNLDQALASTLKSLELQPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELQPDNPTA-HM 207

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G     LG L +A  +  ++L+L P+N  AL+ L  +     +   + + +    ++ 
Sbjct: 208 NLGGIYKDLGNLDQALASTLKSLELQPDNPTALINLGGI---YKDLGNLDQALASTLKSL 264

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           E+ P    A   L   +   G    ++Q   + L      P    ++ NL   Y   G+ 
Sbjct: 265 ELQPDNPTAHMNLGGIYQDLGN---LDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNL 321

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
           ++A     +++K +    +    +  LG +   LG+   AL +  K LE+ PDN +TL  
Sbjct: 322 DQA---LASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPDTLIN 378

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 396
           LG IY  LG +++A     K+ ++ P +  A ++LG   I  D    LD    A     K
Sbjct: 379 LGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGG--IYQD----LDNLDQALASTLK 432

Query: 397 AGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           + E  P   + L N+G I+ + G  + A  S   +L        L     T  ++     
Sbjct: 433 SLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLE-------LKPDNPTAHMNLGGI- 484

Query: 455 LQFKDM-QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH--DTVAASVLYRLILFKYQ 511
             +KD+  L     +    +EL  +  T   NL  + + +   D   AS L  L L    
Sbjct: 485 --YKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLEL--QP 540

Query: 512 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKE 569
           D  D  + L  I K   NL  ++    ++L++    P+ L  LG +  +L N D   A  
Sbjct: 541 DNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALA-S 599

Query: 570 TFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSN 629
           T ++     D   ++  L       +  L N  +A       LE   +    +I      
Sbjct: 600 TLKSLELKPDNPTAHMNLG----GIYQDLGNLDQALASTLKSLELKPDNPDTLI------ 649

Query: 630 LYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQM----PDVWINLAHVYFAQGNF 685
               N  G+           KDL    Q  AS    +++    PD  INL  +Y   GN 
Sbjct: 650 ----NLGGIY----------KDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNL 695

Query: 686 ALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDA 745
             A+      L     N  A  L+ L   + +         S L+++ L P N T + + 
Sbjct: 696 DQALASTLKSLELKPDNPTA--LINLGGIYQDLGNLDQALASTLKSLELKPDNPTAQMNL 753

Query: 746 G 746
           G
Sbjct: 754 G 754



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 133/307 (43%), Gaps = 26/307 (8%)

Query: 74   KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
            K+  +    P T +  G +    G ++QA ++    LE   DN   L+    +  + G  
Sbjct: 840  KSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNL 899

Query: 134  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
              +L    ++L++ P  P  + + +G     LG L +A  +  ++L+L P+N + L+ L 
Sbjct: 900  DQALASTLKSLELKPDNPDTL-INLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLG 958

Query: 194  VMDLQANEAAGIRKGMEKMQRAF-------EIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
                      GI K ++ + +A        E+ P    A   L   +   G    ++Q  
Sbjct: 959  ----------GIYKDLDNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGN---LDQAL 1005

Query: 247  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQ 305
             + L      P    +  NL   Y   G+ ++A    + S++ + + P   I     LG 
Sbjct: 1006 ASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLI----NLGG 1061

Query: 306  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
            +   LG+   AL +  K LE+ PDN +TL  LG IY  LG +++A     K+ ++ P + 
Sbjct: 1062 IYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYQDLGNLDQALASTLKSLELQPDNP 1121

Query: 366  QAFIDLG 372
             A ++LG
Sbjct: 1122 TAHMNLG 1128



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 160/676 (23%), Positives = 257/676 (38%), Gaps = 74/676 (10%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           GR+ D L+  ++ LQ  P  P   +   G     LGQ  KA+Q   +A QLD  + E + 
Sbjct: 13  GRHQDCLQACQQLLQSEPENPLPWKYA-GKSLLALGQPEKAQQCLAKAHQLDTTDPETIK 71

Query: 191 ALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
            +  + +   N+A  IR      + A  I    A A+N L       G  F  EQL + A
Sbjct: 72  DIGNIFNALQNDAEAIR----LYKAALLINQNYAPAINNLGLIAKRQGDLFAAEQLVKRA 127

Query: 250 LAVTNHGPTKSHSYY--NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
             +      +S + Y  NL   Y   G+ ++A     +++K +    +    +  LG + 
Sbjct: 128 CDL-----DQSFAPYHMNLGGIYKDLGNLDQA---LASTLKSLELQPDNPTAHMNLGGIY 179

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             LG+   AL +  K LE+ PDN      LG IY  LG +++A     K+ ++ P +  A
Sbjct: 180 KDLGNLDQALASTLKSLELQPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELQPDNPTA 239

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
            I+LG   I  D G    A  +    L+   +     +  N+G I+ + G  + A  S  
Sbjct: 240 LINLGG--IYKDLGNLDQALASTLKSLELQPDNPTAHM--NLGGIYQDLGNLDQALASTL 295

Query: 428 DALGDGIWLTLLDSKTKTYVIDASASMLQFKDM-QLFHRFENDGNHVELPWNKVTVLFNL 486
            +L        L     T  ++       ++D+  L     +    +EL  +  T   NL
Sbjct: 296 KSLE-------LKPDNPTAHMNLGGI---YQDLGNLDQALASTLKSLELKPDNPTAHMNL 345

Query: 487 ARLLEQIH--DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 544
             + + +   D   AS L  L L    D  D  + L  I K   NL  ++    ++L++ 
Sbjct: 346 GGIYQDLGNLDQALASTLKSLEL--KPDNPDTLINLGGIYKDLGNLDQALASTLKSLELK 403

Query: 545 GKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLS-----LGNWNYFAA 597
              P A   LG +  +L N D   A  T ++     D  D+   L      LGN +   A
Sbjct: 404 PDNPTAHMNLGGIYQDLDNLDQALA-STLKSLELKPDNPDTLINLGGIYKDLGNLDQALA 462

Query: 598 --LRNEKRAPKLEATH------------LEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 643
             L++ +  P     H            L++A     + +     N  A    G +  + 
Sbjct: 463 STLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDL 522

Query: 644 GQFDVSKDLFTQVQEAASGSVFVQM--PDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 701
           G  D       Q   +   S+ +Q   PD  INL  +Y   GN   A+      L     
Sbjct: 523 GNLD-------QALASTLKSLELQPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPD 575

Query: 702 NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS------AS 755
           N D   L+ L   + +         S L+++ L P N T   + G   Q         AS
Sbjct: 576 NPDT--LINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALAS 633

Query: 756 TLQKTRRTADEVRSTV 771
           TL+      D   + +
Sbjct: 634 TLKSLELKPDNPDTLI 649



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 169/734 (23%), Positives = 282/734 (38%), Gaps = 76/734 (10%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q   KA ++D  +P T    G +  A     +A   +K  L  +++  PA+     + 
Sbjct: 52  AQQCLAKAHQLDTTDPETIKDIGNIFNALQNDAEAIRLYKAALLINQNYAPAINNLGLIA 111

Query: 128 FNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
             +G    + +  KRA  +  S  P  + LG G+ +  LG L +A  +  ++L+L P+N 
Sbjct: 112 KRQGDLFAAEQLVKRACDLDQSFAPYHMNLG-GIYK-DLGNLDQALASTLKSLELQPDNP 169

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            A + L  +     +   + + +    ++ E+ P    A   L   +   G    ++Q  
Sbjct: 170 TAHMNLGGI---YKDLGNLDQALASTLKSLELQPDNPTAHMNLGGIYKDLGN---LDQAL 223

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
            + L      P    +  NL   Y   G+ ++A     +++K +    +    +  LG +
Sbjct: 224 ASTLKSLELQPDNPTALINLGGIYKDLGNLDQA---LASTLKSLELQPDNPTAHMNLGGI 280

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
              LG+   AL +  K LE+ PDN      LG IY  LG +++A     K+ ++ P +  
Sbjct: 281 YQDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPT 340

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 424
           A ++LG   I  D G    A   A TL  K+ E  P   + L N+G I+ + G  + A  
Sbjct: 341 AHMNLGG--IYQDLGNLDQAL--ASTL--KSLELKPDNPDTLINLGGIYKDLGNLDQALA 394

Query: 425 SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 484
           S   +L         D+ T    +      L   D  L    ++    +EL  +    L 
Sbjct: 395 STLKSLE-----LKPDNPTAHMNLGGIYQDLDNLDQALASTLKS----LELKPDNPDTLI 445

Query: 485 NLARLLEQIH--DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
           NL  + + +   D   AS L  L L    D   A++ L  I K   NL  ++    ++L+
Sbjct: 446 NLGGIYKDLGNLDQALASTLKSLEL--KPDNPTAHMNLGGIYKDLGNLDQALASTLKSLE 503

Query: 543 VNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLS-----LGNWNYF 595
           +    P A   LG +  +L N D   A  T ++     D  D+   L      LGN +  
Sbjct: 504 LKPDNPTAHMNLGGIYQDLGNLDQALA-STLKSLELQPDNPDTLINLGGIYKDLGNLDQA 562

Query: 596 AA--LRNEKRAPKLEAT------------HLEKAKELYTRVIVQHTSNLYAANGAGVVLA 641
            A  L++ +  P    T            +L++A     + +     N  A    G +  
Sbjct: 563 LASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQ 622

Query: 642 EKGQFDVSKDLFTQVQEAASGSVFVQM----PDVWINLAHVYFAQGNFALAMKMYQNCLR 697
           + G  D         Q  AS    +++    PD  INL  +Y   GN   A+      L 
Sbjct: 623 DLGNLD---------QALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLE 673

Query: 698 KFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS---- 753
               N D   L+ L   + +         S L+++ L P N T   + G   Q       
Sbjct: 674 LKPDNPDT--LINLGGIYKDLGNLDQALASTLKSLELKPDNPTALINLGGIYQDLGNLDQ 731

Query: 754 --ASTLQKTRRTAD 765
             ASTL+      D
Sbjct: 732 ALASTLKSLELKPD 745



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 124/299 (41%), Gaps = 12/299 (4%)

Query: 74   KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
            K+  +    P T +  G +    G ++QA ++    LE   DN   L+    +  + G  
Sbjct: 874  KSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNL 933

Query: 134  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
              +L    ++L++ P  P  + + +G     L  L +A  +  ++L+L P+N  A + L 
Sbjct: 934  DQALASTLKSLELKPDNPDTL-INLGGIYKDLDNLDQALASTLKSLELKPDNPTAHMNLG 992

Query: 194  VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
             +     +   + + +    ++ E+ P     L  L   +   G    ++Q   + L   
Sbjct: 993  GI---YKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGN---LDQALASTLKSL 1046

Query: 254  NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGD 312
               P    +  NL   Y   G+ ++A    + S++ + + P   I     LG +   LG+
Sbjct: 1047 ELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLI----NLGGIYQDLGN 1102

Query: 313  FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
               AL +  K LE+ PDN      LG IY  LG +++A     K+ ++ P    A  +L
Sbjct: 1103 LDQALASTLKSLELQPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDSPGAVNNL 1161



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 17/288 (5%)

Query: 74   KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
            K+  +    P T +  G +    G ++QA ++    LE   DN   L+    +  +    
Sbjct: 908  KSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLDNL 967

Query: 134  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
              +L    ++L++ P  P A  + +G     LG L +A  +  ++L+L P+N + L+ L 
Sbjct: 968  DQALASTLKSLELKPDNPTA-HMNLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLG 1026

Query: 194  VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
             +     +   + + +    ++ E+ P     L  L   +   G    ++Q   + L   
Sbjct: 1027 GI---YKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGN---LDQALASTLKSL 1080

Query: 254  NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
               P    +  NL   Y   G+ ++A     +++K +    +    +  LG +   LG+ 
Sbjct: 1081 ELKPDNPDTLINLGGIYQDLGNLDQA---LASTLKSLELQPDNPTAHMNLGGIYQDLGNL 1137

Query: 314  RSALTNFEKVLEIYPDNCETLKALGHIYVQLG-------QIEKAQELL 354
              AL +  K LE+ PD+   +  L     QL         +E+A ELL
Sbjct: 1138 DQALASTLKSLELKPDSPGAVNNLKAFIEQLNLSQSNAKNLERAYELL 1185


>gi|334117447|ref|ZP_08491538.1| histidine kinase [Microcoleus vaginatus FGP-2]
 gi|333460556|gb|EGK89164.1| histidine kinase [Microcoleus vaginatus FGP-2]
          Length = 949

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 176/380 (46%), Gaps = 26/380 (6%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
            F  A Q + +A + +   P T       L + G+++QA   F+  L+   D+   L   
Sbjct: 211 QFEKAQQIFERALQREPDNPITLSQYANALASNGQLDQALEFFERSLQIPPDDAVTLSRY 270

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI-GLCRYKLGQLGKARQAFQRALQLD 182
           A    + G++  + +F++++LQ+ P    A+ L          GQL KA Q F+R+LQ++
Sbjct: 271 ANALASNGQFEKAWQFFEQSLQIKPD--NAVTLSCYANALASNGQLEKAWQFFERSLQIE 328

Query: 183 PENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           P N   L   A A+     +E     K ++ ++R+ ++ P   + LN+ A     TGQH 
Sbjct: 329 PNNQRILNQYATALASTGQHE-----KVVQILERSLQLEPNDPITLNHYATALASTGQHE 383

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
              +L + +L +  + P     Y N   +  S G +EKA  ++  S++   +P++ I   
Sbjct: 384 KTLELLKRSLKLEPNAPITLSRYAN---ALASTGQHEKALQFFERSLQL--EPNDAI--- 435

Query: 301 YGLGQVQLKL---GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             L +    L   G    AL  FE+ ++I P++  TL +  H     GQ EKA +   ++
Sbjct: 436 -TLSRYANALASNGHPDQALQFFERSIQIKPNHPRTLSSYAHTLATTGQYEKALQYFERS 494

Query: 358 AKIDPRDAQ---AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN-NIGVIH 413
            +I P++++   +++D    L+    G   +A    + +  +A       V+  N+G ++
Sbjct: 495 LQIQPQNSRMLSSYLDFQYALVLEKVGKHQEAIDQLKAIKIEALTPYQANVIRVNLGRLY 554

Query: 414 FEKGEFESAHQSFKDALGDG 433
           ++  + E   + F+ A+ + 
Sbjct: 555 YQIKQPEKGKEYFEAAIANS 574



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 117/302 (38%), Gaps = 35/302 (11%)

Query: 85  TWVGKGQLLLAKGEV---EQASSAFKIVLEADRDNVPALLGQACV------EFNRGRYSD 135
            W   GQ L A  EV   ++AS +F+   + D  N   +L + C        FNR +  +
Sbjct: 43  VWSKYGQTL-ALPEVNRDDEASISFEKARQID-PNDKKVLSRYCKFLQDPNRFNRSK--N 98

Query: 136 SLEFYKRALQVHPSCPGAIR-LGIGLCRYKLG------------QLGKARQAFQRALQLD 182
            L  Y+  LQ+ PS    +   G  L +                +  KA    + AL+ +
Sbjct: 99  LLSIYEDLLQLEPSNVVTLTGYGKALVKEGEYEKEKGEYEKAQVKYEKAIGILESALKFE 158

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P N   L   A   L  NE    RK  + ++R   I P     +   AN     GQ    
Sbjct: 159 PGNKITLNVYAEA-LIKNE--NYRKAFDILERLLVIEPTNNTTVRTYANALASNGQFEKA 215

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           +Q+ E AL      P     Y N   +  S G  ++A  ++  S++    P +       
Sbjct: 216 QQIFERALQREPDNPITLSQYAN---ALASNGQLDQALEFFERSLQ---IPPDDAVTLSR 269

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
                   G F  A   FE+ L+I PDN  TL    +     GQ+EKA +   ++ +I+P
Sbjct: 270 YANALASNGQFEKAWQFFEQSLQIKPDNAVTLSCYANALASNGQLEKAWQFFERSLQIEP 329

Query: 363 RD 364
            +
Sbjct: 330 NN 331


>gi|282898924|ref|ZP_06306907.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196178|gb|EFA71092.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 862

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 138/312 (44%), Gaps = 12/312 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + + ++ +I+     T    G+ L   G+ ++A   F+  L+ + DN   L       
Sbjct: 95  ACEIFERSLQINPDNTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLNSYGKAL 154

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            + G Y  + E ++R+LQ++P     I L   G          KA + F+R+LQ++P+N 
Sbjct: 155 ADSGDYKKACEIFERSLQINPD--DTITLNSYGKALADSDDYKKACEIFERSLQINPDNT 212

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
              + L        ++   +K  E  +R+ +I P   + L         +G +    ++ 
Sbjct: 213 ---ITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEIF 269

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           E +L +         SY+   ++    GDY+KA   +  S+ +IN P + I    G G+ 
Sbjct: 270 ERSLQINPDNTITLTSYW---KALADSGDYKKACEIFERSL-QIN-PDDTI-TLTGYGKA 323

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
               GD++ A   FE+ L+I PD+  TL + G      G  +KA E+  ++ +I+P D  
Sbjct: 324 LADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEIFERSLQINPDDTI 383

Query: 367 AFIDLGELLISS 378
                G+ L  S
Sbjct: 384 TLTSYGKALADS 395



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 163/376 (43%), Gaps = 22/376 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + + ++ +I+     T    G+ L   G+ ++A   F+  L+ + D+   L       
Sbjct: 27  ACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNSYWKAL 86

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            + G Y  + E ++R+LQ++P     I L   G      G   KA + F+R+LQ++P+N 
Sbjct: 87  ADSGDYKKACEIFERSLQINPD--NTITLTSYGKALADSGDYKKACEIFERSLQINPDNT 144

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
              + L        ++   +K  E  +R+ +I P   + LN        +  +    ++ 
Sbjct: 145 ---ITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNSYGKALADSDDYKKACEIF 201

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           E +L +        +SY    ++    GDY+KA   +  S+ +IN         Y  G+ 
Sbjct: 202 ERSLQINPDNTITLNSY---GKALADSGDYKKACEIFERSL-QINPDDTITLTSY--GKA 255

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
               GD++ A   FE+ L+I PDN  TL +        G  +KA E+  ++ +I+P D  
Sbjct: 256 LADSGDYKKACEIFERSLQINPDNTITLTSYWKALADSGDYKKACEIFERSLQINPDDTI 315

Query: 367 AFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
                G+ L  S D   A + F+  R+L     + +    L + G    + G+++ A + 
Sbjct: 316 TLTGYGKALADSGDYKKACEIFE--RSLQINPDDTI---TLTSYGKALADSGDYKKACEI 370

Query: 426 FKDAL----GDGIWLT 437
           F+ +L     D I LT
Sbjct: 371 FERSLQINPDDTITLT 386



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 161/365 (44%), Gaps = 18/365 (4%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + + ++ +I+  +  T     + L   G+ ++A   F+  L+ + DN   L       
Sbjct: 61  ACEIFERSLQINPDDTITLNSYWKALADSGDYKKACEIFERSLQINPDNTITLTSYGKAL 120

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            + G Y  + E ++R+LQ++P     I L   G      G   KA + F+R+LQ++P++ 
Sbjct: 121 ADSGDYKKACEIFERSLQINPD--NTITLNSYGKALADSGDYKKACEIFERSLQINPDDT 178

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
              + L        ++   +K  E  +R+ +I P   + LN        +G +    ++ 
Sbjct: 179 ---ITLNSYGKALADSDDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIF 235

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           E +L +    P  + +  +  ++    GDY+KA   +  S+ +IN  +      Y   + 
Sbjct: 236 ERSLQI---NPDDTITLTSYGKALADSGDYKKACEIFERSL-QINPDNTITLTSY--WKA 289

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
               GD++ A   FE+ L+I PD+  TL   G      G  +KA E+  ++ +I+P D  
Sbjct: 290 LADSGDYKKACEIFERSLQINPDDTITLTGYGKALADSGDYKKACEIFERSLQINPDDTI 349

Query: 367 AFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
                G+ L  S D   A + F+  R+L     + +    L + G    + G+++ A + 
Sbjct: 350 TLTSYGKALADSGDYKKACEIFE--RSLQINPDDTI---TLTSYGKALADSGDYKKACEI 404

Query: 426 FKDAL 430
           F+ +L
Sbjct: 405 FERSL 409



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 154/358 (43%), Gaps = 30/358 (8%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G+ L   G+ ++A   F+  L+ + DN   L        + G Y  + E ++R+LQ++P 
Sbjct: 15  GKALADSGDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPD 74

Query: 150 CPGAIRLGIGLCRY-----KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
                   I L  Y       G   KA + F+R+LQ++P+N    + L        ++  
Sbjct: 75  ------DTITLNSYWKALADSGDYKKACEIFERSLQINPDNT---ITLTSYGKALADSGD 125

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
            +K  E  +R+ +I P   + LN        +G +    ++ E +L +        +SY 
Sbjct: 126 YKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNSY- 184

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
              ++     DY+KA   +  S+ +IN  +      Y  G+     GD++ A   FE+ L
Sbjct: 185 --GKALADSDDYKKACEIFERSL-QINPDNTITLNSY--GKALADSGDYKKACEIFERSL 239

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAA 383
           +I PD+  TL + G      G  +KA E+  ++ +I+P +        + L  S D   A
Sbjct: 240 QINPDDTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLTSYWKALADSGDYKKA 299

Query: 384 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL----GDGIWLT 437
            + F+  R+L     + +    L   G    + G+++ A + F+ +L     D I LT
Sbjct: 300 CEIFE--RSLQINPDDTI---TLTGYGKALADSGDYKKACEIFERSLQINPDDTITLT 352



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 150/342 (43%), Gaps = 38/342 (11%)

Query: 110 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQL 168
           ++ + DN  AL        + G Y  + E ++R+LQ++P     I L   G      G  
Sbjct: 1   MQINPDNTIALNSYGKALADSGDYKKACEIFERSLQINPD--NTITLNSYGKALADSGDY 58

Query: 169 GKARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
            KA + F+R+LQ++P++   L     ALA       ++   +K  E  +R+ +I P   +
Sbjct: 59  KKACEIFERSLQINPDDTITLNSYWKALA-------DSGDYKKACEIFERSLQINPDNTI 111

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
            L         +G +    ++ E +L +        +SY    ++    GDY+KA   + 
Sbjct: 112 TLTSYGKALADSGDYKKACEIFERSLQINPDNTITLNSY---GKALADSGDYKKACEIFE 168

Query: 285 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
            S+ +IN         Y  G+      D++ A   FE+ L+I PDN  TL + G      
Sbjct: 169 RSL-QINPDDTITLNSY--GKALADSDDYKKACEIFERSLQINPDNTITLNSYGKALADS 225

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 404
           G  +KA E+  ++ +I+P D       G+ L  +D+G     +K A  + +++   + I 
Sbjct: 226 GDYKKACEIFERSLQINPDDTITLTSYGKAL--ADSG----DYKKACEIFERS---LQIN 276

Query: 405 VLNNIGVIHFEK-----GEFESAHQSFKDAL----GDGIWLT 437
             N I +  + K     G+++ A + F+ +L     D I LT
Sbjct: 277 PDNTITLTSYWKALADSGDYKKACEIFERSLQINPDDTITLT 318



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 47/257 (18%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + + ++ +I+  +  T    G+ L   G+ ++A   F+  L+ + DN   L       
Sbjct: 231 ACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLTSYWKAL 290

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            + G Y  + E ++R+LQ++P     I L G G      G   KA + F+R+LQ++P++ 
Sbjct: 291 ADSGDYKKACEIFERSLQINPD--DTITLTGYGKALADSGDYKKACEIFERSLQINPDDT 348

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
              + L        ++   +K  E  +R+ +I P                          
Sbjct: 349 ---ITLTSYGKALADSGDYKKACEIFERSLQINP-------------------------- 379

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           +  + +T++G   + S           GDY+KA   +  S++   +P  +IF  +   + 
Sbjct: 380 DDTITLTSYGKALADS-----------GDYKKACEIFERSLQI--QPDNYIF--FIFAKC 424

Query: 307 QLKLGDFRSALTNFEKV 323
             +LG ++ A+T  E++
Sbjct: 425 LEQLGRYKDAITQIEQI 441


>gi|258571672|ref|XP_002544639.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237904909|gb|EEP79310.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1117

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 168/785 (21%), Positives = 307/785 (39%), Gaps = 151/785 (19%)

Query: 213 QRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNHGPTKSHSYYNLA 267
           Q+AF++   YP  CAM   Y     F   +HF  VE L   A+ +T+     S  +Y LA
Sbjct: 238 QKAFKLDKEYPMTCAMFGGY-----FLLRRHFPTVEALARKAIELTDVNAIASDGWYLLA 292

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEI 326
           R  H +GD  KA  YY  + +      +   P  +G  Q+Q++  D   A    EK+++ 
Sbjct: 293 RKEHEEGDPAKAQEYYNRADQARGGSDKGYLPAKFGAVQMQIRSQDKDGAKFRLEKIVQ- 351

Query: 327 YPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPRD 364
              N E +  LG +Y +                +I+KA  LL         +  KI P D
Sbjct: 352 QKKNPEAMTLLGSLYAEEVFEVANSANKEDKSAEIKKATSLLEAVRASWKDEKKKISP-D 410

Query: 365 AQAFIDLGEL-----------------------LISSDTGAALDAFKTARTLLKKAGEEV 401
               + L  L                       +  SD    ++  +    +L+   E +
Sbjct: 411 ISVLLYLARLYETTAPEKSMQCLSQIEQIQLAQIPDSDKPDDVEGEEAMTNILR---ERL 467

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
             ++LNN+G   ++  + E A   F+ AL   +     D  T T  +             
Sbjct: 468 APQLLNNMGCFLYQADKIEQARNMFQTALNACVKTQEKDDGTDTDAL------------- 514

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                              T+ +NL R  E       A  +Y  +L ++ DY +A  RL 
Sbjct: 515 -----------------VTTISYNLGRTYEAAGLPEEAEKVYEGLLKRHGDYSEANARLT 557

Query: 522 AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK 581
            ++  ++      + + +  + +       ++ G        W   K   R A+ A D +
Sbjct: 558 YMSLRQSPTDEGPKKMAKLYEADATNLEVRALFG--------WYLNKSKRRTANIAEDHE 609

Query: 582 --------------DSYATLSLGNWNYFAAL---RNEKRAPKLEATHLEKAKELYTRVIV 624
                         D YA   +GN +  AA    R+ ++  +      ++A E + + + 
Sbjct: 610 QRHYKHTLLGYDKHDRYALTGMGNVHLMAARDMRRDGEQDRERRRKMYDRAVEFFDKALQ 669

Query: 625 QHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 683
               N YAA G  + L + K  F  +  +F++V+++      ++   V++NL HV+    
Sbjct: 670 LDPKNAYAAQGIAIALVDDKKDFSTAVQIFSKVRDS------IRDASVYLNLGHVFAELR 723

Query: 684 NFALAMKMYQNCL-RKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLR 742
            F+ +++   +CL R ++     +  +   +T  E  Q         RA  +AP    L 
Sbjct: 724 QFSKSIENILSCLGRVWFLKGKQERSIASMKTALEYAQ---------RARSVAPEQKHLD 774

Query: 743 FDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN-----LHLHGF 795
           F+      + +  AS L +T++T+ E+   +  LE AV  F  ++ A N     + L   
Sbjct: 775 FNLAFVQNEIAHLASNLPETQKTSQEIEEALGGLEEAVATFEKIAKAPNPPYPPISLEQR 834

Query: 796 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 855
                NT +   +  L + K + E    + QQ R+ +EA ++    E  + +  E ++  
Sbjct: 835 ANMIKNTTINQLQRALQSQKEYEEKNAAKLQQAREAREAEQKRREEERRKLEEAEAER-- 892

Query: 856 LEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRK--GG 913
             KR++ +E++R+ ++ +    ++     +     R       D E G   KR+++  G 
Sbjct: 893 --KRQIAEERQRMVEEAQRLAAIR-----TEEEKAREAAEYTTDSETGDKIKRKKRPSGA 945

Query: 914 KRRKK 918
           KR+KK
Sbjct: 946 KRKKK 950


>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
 gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
            SB210]
          Length = 2315

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 168/377 (44%), Gaps = 44/377 (11%)

Query: 87   VGKGQLLLAKGEVEQASSAFKIVLE--ADRDNVP-ALLGQACVEFNRGRYSDSLEFYKRA 143
            V KG+L L +G++E+A + F++ L+     D +   LLG     + +G++ D+L+ +  +
Sbjct: 1793 VDKGRLYLKQGKLEEAQNLFQLALKYYPKTDYLSHHLLGFTF--YQQGKFQDALQKFNES 1850

Query: 144  LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 203
            LQ++P     I   IG    +     +A + +Q+AL++ P    AL+ L   +L   +  
Sbjct: 1851 LQINP-LQVDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYTALLNLG--NLYFWDKN 1907

Query: 204  GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
             +++  E  Q+A +I P     L   A  ++   Q     Q  E AL++    P     +
Sbjct: 1908 MVKEANECFQKALDINPNSLQVLKRAALFYYSNNQFQEAIQNYEKALSI---DPQDYEIF 1964

Query: 264  YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
              LA+ YH  G+ +KA      ++K+  + H+F   +Y LG    ++G    A+  +   
Sbjct: 1965 GCLAQVYHQIGNIQKAIKILEKAIKQNPRNHQF---HYDLGNYSSEVGLKNEAIQCYLNA 2021

Query: 324  LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS------ 377
            LEI P+  + L  LG  Y+ + ++E+AQ    K  +  P+D  A I L  L I       
Sbjct: 2022 LEINPEFYQALNNLGGEYIFMERLEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEE 2081

Query: 378  ----------------------SDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIH 413
                                  +    AL   + A    +KA +  P  ++VL+NI ++H
Sbjct: 2082 AKDYLQKCLLNNNLDYDACNGIAQCYEALGMIEEAIFWCEKALKINPNSVDVLSNIALLH 2141

Query: 414  FEKGEFESAHQSFKDAL 430
            F  G  E +   F+  L
Sbjct: 2142 FMNGNTEESKICFEKTL 2158



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 150/357 (42%), Gaps = 54/357 (15%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A Q Y KA  ID   P  +   G L     ++     A KI+ +A + N P         
Sbjct: 1946 AIQNYEKALSID---PQDYEIFGCLAQVYHQIGNIQKAIKILEKAIKQN-PR---NHQFH 1998

Query: 128  FNRGRYS-------DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            ++ G YS       ++++ Y  AL+++P    A+   +G     + +L +A+  F + L+
Sbjct: 1999 YDLGNYSSEVGLKNEAIQCYLNALEINPEFYQALN-NLGGEYIFMERLEEAQSCFLKILE 2057

Query: 181  LDPENVEALVALAVMDL------------------------------QANEAAG-IRKGM 209
              P++  AL+ L V+ +                              Q  EA G I + +
Sbjct: 2058 TYPQDFNALIQLVVLCIERGMIEEAKDYLQKCLLNNNLDYDACNGIAQCYEALGMIEEAI 2117

Query: 210  EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
               ++A +I P     L+ +A   F  G     +   E  L +    P  S++  NL   
Sbjct: 2118 FWCEKALKINPNSVDVLSNIALLHFMNGNTEESKICFEKTLKIK---PDHSYALTNLGFI 2174

Query: 270  YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
            Y+ +GDY KA  +Y  S+ EI+      F    LG +    G    A   +EK L+I P+
Sbjct: 2175 YYLQGDYSKAISFYQQSI-EIDPSMHHGFN--NLGLIYQHQGLAEQAKQQYEKALQILPN 2231

Query: 330  NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 386
              + L  LG IY + G+IE A E  +KA ++DP+  + +  LG   I    G  ++A
Sbjct: 2232 FAQALNNLGSIYYKNGKIEDAIEYYKKAQQVDPQFLEPYKSLG--YIYQKIGMVVEA 2286



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 171/400 (42%), Gaps = 36/400 (9%)

Query: 41   LNALGV-YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLA-KGE 98
            +N L V  Y  +G I  +Q  K++    A + Y KA  I     +  +  G L    K  
Sbjct: 1853 INPLQVDIYNTIGSIYDQQNMKDQ----AIKQYQKALEIQPSYYTALLNLGNLYFWDKNM 1908

Query: 99   VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
            V++A+  F+  L+ + +++  L   A   ++  ++ ++++ Y++AL + P     I   +
Sbjct: 1909 VKEANECFQKALDINPNSLQVLKRAALFYYSNNQFQEAIQNYEKALSIDPQ-DYEIFGCL 1967

Query: 159  GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
                +++G + KA +  ++A++ +P N +    L      ++E     + ++    A EI
Sbjct: 1968 AQVYHQIGNIQKAIKILEKAIKQNPRNHQFHYDLGNY---SSEVGLKNEAIQCYLNALEI 2024

Query: 219  YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             P    ALN L   + F  +   +E+     L +    P   ++   L      +G  E+
Sbjct: 2025 NPEFYQALNNLGGEYIFMER---LEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEE 2081

Query: 279  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
            A  Y    +   N  ++      G+ Q    LG    A+   EK L+I P++ + L  + 
Sbjct: 2082 AKDYLQKCLLNNNLDYD---ACNGIAQCYEALGMIEEAIFWCEKALKINPNSVDVLSNIA 2138

Query: 339  HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKA 397
             ++   G  E+++    K  KI P  + A  +LG +  +  D   A+  ++ +       
Sbjct: 2139 LLHFMNGNTEESKICFEKTLKIKPDHSYALTNLGFIYYLQGDYSKAISFYQQS------- 2191

Query: 398  GEEVPIEV-------LNNIGVIHFEKGEFESAHQSFKDAL 430
                 IE+        NN+G+I+  +G  E A Q ++ AL
Sbjct: 2192 -----IEIDPSMHHGFNNLGLIYQHQGLAEQAKQQYEKAL 2226



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 20/275 (7%)

Query: 99   VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
            +E+A S F  +LE    +  AL+    +   RG   ++ ++ ++ L  +     A   GI
Sbjct: 2045 LEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEEAKDYLQKCLLNNNLDYDACN-GI 2103

Query: 159  GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
              C   LG + +A    ++AL+++P +V+ L  +A++          +   EK     +I
Sbjct: 2104 AQCYEALGMIEEAIFWCEKALKINPNSVDVLSNIALLHFMNGNTEESKICFEK---TLKI 2160

Query: 219  YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
             P  + AL  L   ++  G +       + ++ +    P+  H + NL   Y  +G  E+
Sbjct: 2161 KPDHSYALTNLGFIYYLQGDYSKAISFYQQSIEI---DPSMHHGFNNLGLIYQHQGLAEQ 2217

Query: 279  AGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
            A   Y  +++        I P +      LG +  K G    A+  ++K  ++ P   E 
Sbjct: 2218 AKQQYEKALQ--------ILPNFAQALNNLGSIYYKNGKIEDAIEYYKKAQQVDPQFLEP 2269

Query: 334  LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
             K+LG+IY ++G + +A+ +L +  ++     + F
Sbjct: 2270 YKSLGYIYQKIGMVVEAKNMLDQLTQLKQNQQKIF 2304


>gi|374851919|dbj|BAL54865.1| tetratricopeptide repeat domain protein [uncultured Acidobacteria
            bacterium]
          Length = 1230

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 148/668 (22%), Positives = 268/668 (40%), Gaps = 105/668 (15%)

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP-ALLGQACVEFNRGRYSDSLEFYKRA 143
            +W   G L   + ++++A++AF+  LEA     P A      V   +G    + + ++ A
Sbjct: 389  SWYELGHLFFLRKDLDRAAAAFRQALEAAGGTFPRARYNLGRVLHEKGELQAAADAFRHA 448

Query: 144  LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD----PENVEAL--VALAVMDL 197
            +  HP  P A    +     +LG+L  ARQA Q A++      PE    L  +A +  DL
Sbjct: 449  IAEHPHFPNA-HFNLARTLLELGELEAARQAIQTAIEQRERHFPEAYHLLGRIAYSRGDL 507

Query: 198  QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
                A  I      + +  E YP    A   L   F   G+   +E+  E         P
Sbjct: 508  ----AEAIDAYQTAIHQRQEPYP---EAWRDLGLAFLVQGK---LEEAIEAYRRAIAACP 557

Query: 258  TK-SHSYYNLARSYHSKGDYEKAGLYYMASVKE--------INKPHEFIFPYYGLGQVQL 308
            T    +Y  L R+   KG         M ++ E        +    +F   +Y LG   L
Sbjct: 558  TPWPEAYLELGRALQQKG---------MDALPEAIEAFRQAVRARSDFPEAHYHLGCALL 608

Query: 309  KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
              G++  A+ +  + +E  P+  E    LG   + LG++E+A E  R+A  + P    A+
Sbjct: 609  DAGEWEGAIQSLRQAIEQQPEFPEAYDHLGRALLHLGRVEEAIEAYRQALALRPDFVHAY 668

Query: 369  IDLG-ELLISSDTGAALDAFKTARTL---LKKAGEEVPIEVLN----------------- 407
              LG  L ++ +   A+ A + A  L   L +A  ++ + +L+                 
Sbjct: 669  HGLGVALYLNGELDEAIRALERALELKPDLPRAHHDLGVALLDRGEIERAIAAFQAAIQT 728

Query: 408  ----------NIGVIHFEKGEFESAHQSFKDAL------GDGIWLTLLDSKTKTYVIDAS 451
                      ++G  +F +G+ E A  +++ A+      G   +   L    +  V +A 
Sbjct: 729  AGRPYPEGYYDLGNAYFARGDLEQAIAAYRTAIEHKPDFGQAHYRLGLALWERGEVAEAR 788

Query: 452  ASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 511
            A+         FHR       VE P       ++L  +L +  +  AA    R  + + +
Sbjct: 789  AA---------FHR----AIEVE-PQAFPQAYYSLGVMLLEHGELDAALEALRQAIAQCE 834

Query: 512  DYVDAYLRLAAIAKARNNLQLSIELVNEAL-KVNGKYPNALSMLGDLELKNDDWVKAKET 570
             +  AY  L  +  A+  ++ +I     A+ + +G++P AL  LG+  ++  D  +A E 
Sbjct: 835  LFPLAYYSLGNVFLAQGRIEDAISAYRTAIEQSSGRFPEALWNLGNAYVRQGDITRAIEA 894

Query: 571  FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNL 630
            +R A + T G+D              AL +      L+A   E+A+  + + +  H ++ 
Sbjct: 895  YRQAIEQTGGRDP-------------ALHHNLGLVLLQAGEWEQAEASFRKALELHPNDP 941

Query: 631  YAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 690
             A    GV+   +G+ + +     Q  E  SG      P+   +L    + +G +A A +
Sbjct: 942  EAHYYLGVLALGRGRLEEALRELRQALEQKSGP----FPEAHFDLGKALYEKGEYAAAAR 997

Query: 691  MYQNCLRK 698
             +Q  L +
Sbjct: 998  EFQMALEQ 1005



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 139/299 (46%), Gaps = 52/299 (17%)

Query: 83  PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 142
           P  +   G    A+G++EQA +A++  +E   D            F +  Y         
Sbjct: 734 PEGYYDLGNAYFARGDLEQAIAAYRTAIEHKPD------------FGQAHY--------- 772

Query: 143 ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV-EALVALAVMDLQANE 201
                       RLG+ L  ++ G++ +AR AF RA++++P+   +A  +L VM L+  E
Sbjct: 773 ------------RLGLAL--WERGEVAEARAAFHRAIEVEPQAFPQAYYSLGVMLLEHGE 818

Query: 202 AAGIRKGMEKMQRAF---EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 258
              +   +E +++A    E++P   +A   L N F   G+  + + ++    A+      
Sbjct: 819 ---LDAALEALRQAIAQCELFP---LAYYSLGNVFLAQGR--IEDAISAYRTAIEQSSGR 870

Query: 259 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
              + +NL  +Y  +GD  +A   Y  ++++       +  ++ LG V L+ G++  A  
Sbjct: 871 FPEALWNLGNAYVRQGDITRAIEAYRQAIEQTGGRDPAL--HHNLGLVLLQAGEWEQAEA 928

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA--AKIDPRDAQAFIDLGELL 375
           +F K LE++P++ E    LG + +  G++E+A   LR+A   K  P   +A  DLG+ L
Sbjct: 929 SFRKALELHPNDPEAHYYLGVLALGRGRLEEALRELRQALEQKSGPFP-EAHFDLGKAL 986



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 147/673 (21%), Positives = 272/673 (40%), Gaps = 60/673 (8%)

Query: 81  HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL---LGQACVEFNRGRYSDSL 137
           H P      G LL+ KG++E+A  AF+  +E      P     LG+A +   RGR  +++
Sbjct: 178 HSPDIHFQLGWLLMGKGDLEEAIEAFRTAIEQRGGVYPEAQYELGRALL--ARGRLEEAI 235

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
             ++  LQV+P+ P A    +G    + G L  AR+A + A++    N  A  A   + L
Sbjct: 236 TTFRTLLQVNPNHPEAY-FNLGRAYLRQGDLEAAREALETAIRQRGGNFAA--AHHQLGL 292

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +   + +      RA E  P+   A       ++  G+ +  +   E A+A  +   
Sbjct: 293 LLAQQGDVEQAAAAYHRAIEQNPFFPRA-------YYDLGRLYATQGAYEEAIAALSRAV 345

Query: 258 TKSHSYY-----NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
            +   ++      LAR+  S G  E+A + ++  V  I + +E    +Y LG +     D
Sbjct: 346 EQRQGHFPEAELELARALASAGRLEEA-IAHLERV--IAQGYEVAESWYELGHLFFLRKD 402

Query: 313 FRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
              A   F + LE         +  LG +  + G+++ A +  R A    P    A  +L
Sbjct: 403 LDRAAAAFRQALEAAGGTFPRARYNLGRVLHEKGELQAAADAFRHAIAEHPHFPNAHFNL 462

Query: 372 GELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              L+   +  AA  A +TA   +++     P E  + +G I + +G+   A  +++ A+
Sbjct: 463 ARTLLELGELEAARQAIQTA---IEQRERHFP-EAYHLLGRIAYSRGDLAEAIDAYQTAI 518

Query: 431 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
                    +   + +     A ++Q K  +    +         PW +  +   L R L
Sbjct: 519 HQ-----RQEPYPEAWRDLGLAFLVQGKLEEAIEAYRRAIAACPTPWPEAYL--ELGRAL 571

Query: 491 EQI-HDTVAASV-LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 548
           +Q   D +  ++  +R  +    D+ +A+  L          + +I+ + +A++   ++P
Sbjct: 572 QQKGMDALPEAIEAFRQAVRARSDFPEAHYHLGCALLDAGEWEGAIQSLRQAIEQQPEFP 631

Query: 549 NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK-RAPKL 607
            A   LG   L      +A E +R A  A      +A   LG   Y     +E  RA   
Sbjct: 632 EAYDHLGRALLHLGRVEEAIEAYRQAL-ALRPDFVHAYHGLGVALYLNGELDEAIRA--- 687

Query: 608 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 667
               LE+A EL   +   H       +  GV L ++G+ + +   F    + A       
Sbjct: 688 ----LERALELKPDLPRAH-------HDLGVALLDRGEIERAIAAFQAAIQTAGRP---- 732

Query: 668 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKS 727
            P+ + +L + YFA+G+   A+  Y+  +        A   L LA   +E  +  + + +
Sbjct: 733 YPEGYYDLGNAYFARGDLEQAIAAYRTAIEHKPDFGQAHYRLGLAL--WERGEVAEARAA 790

Query: 728 LLRAIHLAPSNYT 740
             RAI + P  + 
Sbjct: 791 FHRAIEVEPQAFP 803



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 159/757 (21%), Positives = 282/757 (37%), Gaps = 128/757 (16%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G+ LLA+G +E+A + F+ +L+ + ++  A          +G    + E  + A++    
Sbjct: 222 GRALLARGRLEEAITTFRTLLQVNPNHPEAYFNLGRAYLRQGDLEAAREALETAIRQRGG 281

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL----AVMDLQANEAAGI 205
              A    +GL   + G + +A  A+ RA++ +P    A   L    A         A +
Sbjct: 282 NFAAAHHQLGLLLAQQGDVEQAAAAYHRAIEQNPFFPRAYYDLGRLYATQGAYEEAIAAL 341

Query: 206 RKGMEKMQRAF-----EIYPYCA---------------MALNY-LANHFFFTGQHFLVEQ 244
            + +E+ Q  F     E+    A               +A  Y +A  ++  G  F + +
Sbjct: 342 SRAVEQRQGHFPEAELELARALASAGRLEEAIAHLERVIAQGYEVAESWYELGHLFFLRK 401

Query: 245 LTETALAVTNH-----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH----- 294
             + A A         G T   + YNL R  H KG+ + A   +  ++ E   PH     
Sbjct: 402 DLDRAAAAFRQALEAAGGTFPRARYNLGRVLHEKGELQAAADAFRHAIAE--HPHFPNAH 459

Query: 295 ---------------------------EFIFP--YYGLGQVQLKLGDFRSALTNFEKVL- 324
                                      E  FP  Y+ LG++    GD   A+  ++  + 
Sbjct: 460 FNLARTLLELGELEAARQAIQTAIEQRERHFPEAYHLLGRIAYSRGDLAEAIDAYQTAIH 519

Query: 325 ---EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD-AQAFIDLGELLISSDT 380
              E YP   E  + LG  ++  G++E+A E  R+A    P    +A+++LG  L     
Sbjct: 520 QRQEPYP---EAWRDLGLAFLVQGKLEEAIEAYRRAIAACPTPWPEAYLELGRALQQKGM 576

Query: 381 GA---ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG------ 431
            A   A++AF+ A     +A  + P E   ++G    + GE+E A QS + A+       
Sbjct: 577 DALPEAIEAFRQA----VRARSDFP-EAHYHLGCALLDAGEWEGAIQSLRQAIEQQPEFP 631

Query: 432 ---DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 488
              D +   LL        I+A    L  +     H +   G  + L       +  L R
Sbjct: 632 EAYDHLGRALLHLGRVEEAIEAYRQALALRP-DFVHAYHGLGVALYLNGELDEAIRALER 690

Query: 489 LLE------QIHDTVAASVLYRLILFKY------------QDYVDAYLRLAAIAKARNNL 530
            LE      + H  +  ++L R  + +             + Y + Y  L     AR +L
Sbjct: 691 ALELKPDLPRAHHDLGVALLDRGEIERAIAAFQAAIQTAGRPYPEGYYDLGNAYFARGDL 750

Query: 531 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLG 590
           + +I     A++    +  A   LG    +  +  +A+  F  A +        A  SLG
Sbjct: 751 EQAIAAYRTAIEHKPDFGQAHYRLGLALWERGEVAEARAAFHRAIEVEPQAFPQAYYSLG 810

Query: 591 NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 650
                           LE   L+ A E   + I Q      A    G V   +G+ + + 
Sbjct: 811 VM-------------LLEHGELDAALEALRQAIAQCELFPLAYYSLGNVFLAQGRIEDAI 857

Query: 651 DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 710
             +    E +SG    + P+   NL + Y  QG+   A++ Y+  + +     D  +   
Sbjct: 858 SAYRTAIEQSSG----RFPEALWNLGNAYVRQGDITRAIEAYRQAIEQ-TGGRDPALHHN 912

Query: 711 LARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGV 747
           L     +A +W+  + S  +A+ L P++    +  GV
Sbjct: 913 LGLVLLQAGEWEQAEASFRKALELHPNDPEAHYYLGV 949



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 109/522 (20%), Positives = 214/522 (40%), Gaps = 66/522 (12%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPA---LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           +GE+E A +A +  ++  +   P    LLG+A   ++ G    ++  ++ A++  P  P 
Sbjct: 19  RGELEAAITALRTAIKQQQGRFPKAYFLLGRAL--YDAGDVERAIAAFRTAIEQQPQYPE 76

Query: 153 A-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
           A   LG+ L R   G+L +A  A++RA++    N     A   + L       + + +E 
Sbjct: 77  AHYYLGMALARR--GELEEAIAAYERAIEQTGGNHPG--AYHNLGLALFGKGEVERAIEA 132

Query: 212 MQRAFE----IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
            ++A      ++P     L +   H   TG+  + E +     A+   G      ++ L 
Sbjct: 133 FRQAIAQRGGVFPRAHFHLGFALAH---TGR--IEEAIAAYRTAIEQSGGHSPDIHFQLG 187

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLE 325
                KGD E+A   +  ++++       ++P   Y LG+  L  G    A+T F  +L+
Sbjct: 188 WLLMGKGDLEEAIEAFRTAIEQRGG----VYPEAQYELGRALLARGRLEEAITTFRTLLQ 243

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD-AQAFIDLGELLISSDTGAAL 384
           + P++ E    LG  Y++ G +E A+E L  A +    + A A   LG LL         
Sbjct: 244 VNPNHPEAYFNLGRAYLRQGDLEAAREALETAIRQRGGNFAAAHHQLGLLLAQQGD---- 299

Query: 385 DAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 442
              + A     +A E+ P       ++G ++  +G +E A  +   A+ +       +++
Sbjct: 300 --VEQAAAAYHRAIEQNPFFPRAYYDLGRLYATQGAYEEAIAALSRAV-EQRQGHFPEAE 356

Query: 443 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF------------------ 484
            +     ASA  L+ + +    R    G  V   W ++  LF                  
Sbjct: 357 LELARALASAGRLE-EAIAHLERVIAQGYEVAESWYELGHLFFLRKDLDRAAAAFRQALE 415

Query: 485 -----------NLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
                      NL R+L +  +  AA+  +R  + ++  + +A+  LA        L+ +
Sbjct: 416 AAGGTFPRARYNLGRVLHEKGELQAAADAFRHAIAEHPHFPNAHFNLARTLLELGELEAA 475

Query: 534 IELVNEALKVNGK-YPNALSMLGDLELKNDDWVKAKETFRAA 574
            + +  A++   + +P A  +LG +     D  +A + ++ A
Sbjct: 476 RQAIQTAIEQRERHFPEAYHLLGRIAYSRGDLAEAIDAYQTA 517



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 221/564 (39%), Gaps = 98/564 (17%)

Query: 50  YLGKIETKQREKEEHFILATQYYNKA-SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKI 108
           YLG    ++ E EE    A   Y +A  +   + P  +   G  L  KGEVE+A  AF+ 
Sbjct: 80  YLGMALARRGELEE----AIAAYERAIEQTGGNHPGAYHNLGLALFGKGEVERAIEAFRQ 135

Query: 109 VLEADRDNV-PAL---LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
            + A R  V P     LG A    + GR  +++  Y+ A++        I   +G     
Sbjct: 136 AI-AQRGGVFPRAHFHLGFALA--HTGRIEEAIAAYRTAIEQSGGHSPDIHFQLGWLLMG 192

Query: 165 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
            G L +A +AF+ A+    E    +   A  +L    A   R  +E+    F        
Sbjct: 193 KGDLEEAIEAFRTAI----EQRGGVYPEAQYEL--GRALLARGRLEEAITTFRTL----- 241

Query: 225 ALNYLANH---FFFTGQHFLVEQLTETA-----LAVTNHGPTKSHSYYNLARSYHSKGDY 276
            L    NH   +F  G+ +L +   E A      A+   G   + +++ L      +GD 
Sbjct: 242 -LQVNPNHPEAYFNLGRAYLRQGDLEAAREALETAIRQRGGNFAAAHHQLGLLLAQQGDV 300

Query: 277 EKAGLYYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEI----YPD- 329
           E+A   Y  ++++   P    FP  YY LG++    G +  A+    + +E     +P+ 
Sbjct: 301 EQAAAAYHRAIEQ--NP---FFPRAYYDLGRLYATQGAYEEAIAALSRAVEQRQGHFPEA 355

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFK 388
             E  +AL       G++E+A   L +        A+++ +LG L  +  D   A  AF+
Sbjct: 356 ELELARAL----ASAGRLEEAIAHLERVIAQGYEVAESWYELGHLFFLRKDLDRAAAAFR 411

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI 448
            A   L+ AG   P     N+G +  EKGE ++A  +F+ A+ +                
Sbjct: 412 QA---LEAAGGTFP-RARYNLGRVLHEKGELQAAADAFRHAIAE---------------- 451

Query: 449 DASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA-SVLYRLIL 507
                                  H   P       FNLAR L ++ +  AA   +   I 
Sbjct: 452 -----------------------HPHFP----NAHFNLARTLLELGELEAARQAIQTAIE 484

Query: 508 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL-KVNGKYPNALSMLGDLELKNDDWVK 566
            + + + +AY  L  IA +R +L  +I+    A+ +    YP A   LG   L      +
Sbjct: 485 QRERHFPEAYHLLGRIAYSRGDLAEAIDAYQTAIHQRQEPYPEAWRDLGLAFLVQGKLEE 544

Query: 567 AKETFRAASDATDGKDSYATLSLG 590
           A E +R A  A       A L LG
Sbjct: 545 AIEAYRRAIAACPTPWPEAYLELG 568


>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
          Length = 927

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 153/360 (42%), Gaps = 52/360 (14%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           NK   +D   P  W  KG  L      E+A +A+   +E D  N  A  G      + G 
Sbjct: 244 NKTIELDPQNPRVWANKGNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGN 303

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
           Y ++++FY +A+++ P    A+    G   Y +G   +A +A  +A++++P+N     A+
Sbjct: 304 YEEAIKFYNKAIEIDPQNSEALS-NKGFALYNVGNREEAIKALDKAIEVNPQN-----AV 357

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
           A  D        I K +   + A E +                       ++ TE     
Sbjct: 358 AWYD-----KGSILKNLGNYEEAVEAF-----------------------DKATEL---- 385

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
               P KS ++ N   +  S G+Y++A   Y  ++ EI+ P +   P+   G     LG 
Sbjct: 386 ---DPKKSSAWNNKGNALSSLGNYDEAIKAYDKAI-EID-PQD-PGPWNNKGIALSNLGS 439

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           +  ++  F+K +EI   +  T    G +   LG  E A +   K+ +IDPR++ A+++ G
Sbjct: 440 YEESIKAFDKAIEINLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEIDPRNSIAWVNKG 499

Query: 373 ELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             L +S        ++   T   KA E  P  ++   N G      G++E A +++  AL
Sbjct: 500 NALYNSGE------YEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKAYDKAL 553



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 161/412 (39%), Gaps = 77/412 (18%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + ++K+  ID      WV KG  L   GE E   +A    +E D  N+ A   +    
Sbjct: 477 AIKAFDKSIEIDPRNSIAWVNKGNALYNSGEYEGVITACDKAIELDPKNLDAWTNKGKAL 536

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGA-----IRLG------------------------- 157
            + G Y ++++ Y +AL++ P  P       I  G                         
Sbjct: 537 SSLGDYEEAIKAYDKALEIEPQDPLTWNNREIAFGHLNNYEEALRAHNREIVSDSEDPEV 596

Query: 158 ----IGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEK 211
                GL  Y  G   ++ +A+ +A++LDPE  +A      +   L+  E A     ++ 
Sbjct: 597 SWNDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEA-----IKA 651

Query: 212 MQRAFEIYPYCAMALN----YLANHFFFT----GQHFLVEQLTETALAVTNHGPTKSHSY 263
             +A E+ P  ++A N     L N  ++          +E  ++ + A  N G T S  Y
Sbjct: 652 YDKAIELKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLY 711

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
                      DYE A   Y  +V EIN   ++   +Y  G     LG +  A+T F K 
Sbjct: 712 -----------DYEGALNAYNKAV-EINP--QYSDAWYNKGNTLCSLGRYEEAVTAFNKT 757

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 383
           LEI P N       G     LG  E+A +   KA +ID +++         LI S+ G A
Sbjct: 758 LEIDPHNSFAWCNKGIALSSLGNYEEAMKSFDKALEIDSQNS---------LIWSNKGLA 808

Query: 384 LDAFKTARTLLKKAGEEVPI-----EVLNNIGVIHFEKGEFESAHQSFKDAL 430
           L  F      +K   + + I     E  NN G   F  G +E A +++   +
Sbjct: 809 LFEFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIGNYEEAMKNYNKTI 860



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 24/360 (6%)

Query: 80  MHE-PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           +HE P  W+ +G  L   G  ++A +A+   +E D  N  A   +     N   Y ++++
Sbjct: 73  VHESPIAWIVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIK 132

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF-------QRALQLDPENVEALVA 191
            Y +A+++ P          G   Y+LG+  ++ +A+       + A++LDP N  A   
Sbjct: 133 AYNKAIELDPQN-SLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYN 191

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
                LQ  E    ++ +    +A EIYP    A       F+ +G +   E+  +    
Sbjct: 192 KGSA-LQ--ELGNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNY---EEAVKACNK 245

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
                P     + N   +      YE+A   Y  S+ E++ P   +  + GLG      G
Sbjct: 246 TIELDPQNPRVWANKGNALSKLNSYEEAITAYNESI-ELD-PQNSV-AWNGLGFAVASSG 302

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           ++  A+  + K +EI P N E L   G     +G  E+A + L KA +++P++A A+ D 
Sbjct: 303 NYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDK 362

Query: 372 GELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           G +L +  +   A++AF  A  L  K          NN G      G ++ A +++  A+
Sbjct: 363 GSILKNLGNYEEAVEAFDKATELDPKKS-----SAWNNKGNALSSLGNYDEAIKAYDKAI 417



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 165/377 (43%), Gaps = 35/377 (9%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + YNKA  +D      W  KG+ L   G+ E+++ A+K  LEA  + +      +   
Sbjct: 130 AIKAYNKAIELDPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAW 189

Query: 128 FNR-------GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           +N+       G Y +++  Y +A++++P    A     GL  Y  G   +A +A  + ++
Sbjct: 190 YNKGSALQELGNYQEAITAYNKAIEIYPEYKEA-WYKKGLAFYNSGNYEEAVKACNKTIE 248

Query: 181 LDPEN--VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           LDP+N  V A    A+  L + E A     +     + E+ P  ++A N L      +G 
Sbjct: 249 LDPQNPRVWANKGNALSKLNSYEEA-----ITAYNESIELDPQNSVAWNGLGFAVASSGN 303

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
           +    +    A+ +    P  S +  N   + ++ G+ E+A +  +    E+N P   + 
Sbjct: 304 YEEAIKFYNKAIEID---PQNSEALSNKGFALYNVGNREEA-IKALDKAIEVN-PQNAV- 357

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            +Y  G +   LG++  A+  F+K  E+ P         G+    LG  ++A +   KA 
Sbjct: 358 AWYDKGSILKNLGNYEEAVEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAI 417

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI-----GVIH 413
           +IDP+D   +         ++ G AL    +    +K   + + I + +++     G++ 
Sbjct: 418 EIDPQDPGPW---------NNKGIALSNLGSYEESIKAFDKAIEINLSSSVTWANKGLVL 468

Query: 414 FEKGEFESAHQSFKDAL 430
              G +E A ++F  ++
Sbjct: 469 SILGNYEGAIKAFDKSI 485



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 23/202 (11%)

Query: 25  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 84
           EI+  Y+D  Y +   L +LG Y              EE    A   +NK   ID H   
Sbjct: 725 EINPQYSDAWYNKGNTLCSLGRY--------------EE----AVTAFNKTLEIDPHNSF 766

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W  KG  L + G  E+A  +F   LE D  N      +    F  G+Y ++++ Y + +
Sbjct: 767 AWCNKGIALSSLGNYEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTI 826

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           ++  S         G   + +G   +A + + + ++LDPE   A    A +    N+   
Sbjct: 827 EIDQSNTETWN-NRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAWYNRACLYSLINDK-- 883

Query: 205 IRKGMEKMQRAFEIYP-YCAMA 225
             + +  ++RA EI P Y  MA
Sbjct: 884 -EQSISDLKRAIEINPAYKEMA 904



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 126/300 (42%), Gaps = 25/300 (8%)

Query: 79  DMHEPS-TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           D  +P  +W  KG  L   G  E++  A+   +E D +   A   +    F+   Y +++
Sbjct: 590 DSEDPEVSWNDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEAI 649

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
           + Y +A+++ P    A     GL         +A +++ +A++L+ ++       A  + 
Sbjct: 650 KAYDKAIELKPQNSLAWN-NKGLALNNSSYYAEALKSYDKAIELNSQDS------AAWNN 702

Query: 198 QANEAAGI---RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
           + N  + +      +    +A EI P  + A     N     G++       E A+   N
Sbjct: 703 KGNTLSSLYDYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRY-------EEAVTAFN 755

Query: 255 HG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
                 P  S ++ N   +  S G+YE+A   +  ++ EI+  +  I+   GL   +   
Sbjct: 756 KTLEIDPHNSFAWCNKGIALSSLGNYEEAMKSFDKAL-EIDSQNSLIWSNKGLALFEF-- 812

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G +  A+  + K +EI   N ET    G  +  +G  E+A +   K  ++DP  + A+ +
Sbjct: 813 GKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAWYN 872



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 13/219 (5%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           ++  A + Y+KA  ++  + + W  KG  L +  + E A +A+   +E +     A   +
Sbjct: 678 YYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGALNAYNKAVEINPQYSDAWYNK 737

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLD 182
                + GRY +++  + + L++ P    A    GI L    LG   +A ++F +AL++D
Sbjct: 738 GNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKGIALSS--LGNYEEAMKSFDKALEID 795

Query: 183 PEN--VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            +N  + +   LA+ +    E A     ++   +  EI        N   + FF  G + 
Sbjct: 796 SQNSLIWSNKGLALFEFGKYEEA-----VKAYNKTIEIDQSNTETWNNRGSAFFLIGNY- 849

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             E+  +         P  S ++YN A  Y    D E++
Sbjct: 850 --EEAMKNYNKTIELDPEYSLAWYNRACLYSLINDKEQS 886


>gi|407849955|gb|EKG04518.1| hypothetical protein TCSYLVIO_004421 [Trypanosoma cruzi]
          Length = 912

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 137/599 (22%), Positives = 244/599 (40%), Gaps = 66/599 (11%)

Query: 80  MHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           +H P     +G   +A G  ++ A   F+  + ADR  V A LG A V ++  RY     
Sbjct: 79  LHRPVLLYLEGLAAMASGTNLQTARVKFEEAIRADRYFVLARLGLAAVSYHMKRYKRCFS 138

Query: 139 FYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQL--DPENVEALVALAVM 195
            Y+  L+   S CP  +R+G+GLC Y L  L  A++  +RAL++  D E    ++ +  +
Sbjct: 139 HYRVVLETLGSFCPPIVRVGMGLCAYHLNHLDYAQRCLERALEVNEDDELALLVLLVVFL 198

Query: 196 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
           D +      I K +E  QR   I P  A  L  +A   +F               AVT  
Sbjct: 199 DRRQ-----IPKVIEVAQRLRGILPENATVLLKVAELVYFR--------------AVTQ- 238

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
              +  +  N  R               +A V+ +    E     Y  G++ L LGD  +
Sbjct: 239 --DRVKASANPIRR-------------LLAEVRRVATVEESAMADYQEGRLCLALGDLSN 283

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           A    E  +++ P+            +  G+  +A++LL +  K  P   +    L   +
Sbjct: 284 ARLLLESAMQVLPNLLAARIHYARFLLLSGRETEAEQLLLRINKDHPNHKEVLQLLA--V 341

Query: 376 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLN-NIG--VIHFEKGE---FESAHQSFKDA 429
            +S  G    A + +R L +      P ++ + +I       +KGE     S     +  
Sbjct: 342 YASRHGLHEKALEYSRRLTEIVA---PGDIRSWSIASWCARLDKGETKKLMSHLARIRKE 398

Query: 430 LGDGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 488
           +G+ + + L+        +      LQ   D +L   F  + N   LP   V ++FNLA 
Sbjct: 399 VGEPVSMKLM---ANIAALGGDTEALQGIIDCELGADFLGEPN---LPVVYVPLVFNLAL 452

Query: 489 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 548
           LLE+  D   A  LY  ++ ++  +   Y+RL  +AK    L+ ++  +    +V  + P
Sbjct: 453 LLEET-DRTRARQLYIFLVKQHGYFRPPYIRLHVLAKDDGFLKQAVAWLVLLQQVLPEDP 511

Query: 549 NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 608
            +L+ +G++  +      A    R+A     G+     L+ G    + + ++ K   +  
Sbjct: 512 TSLASIGEIFFEKGRVGAAMTALRSAR----GRPLPVALAFGAAFLWCSQQHGKDNRRF- 566

Query: 609 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 667
              L  AK+ +  V+ +   N+ AA+G    L  +  +D  + L  +V E      +V+
Sbjct: 567 ---LASAKDRFAFVLRRDNGNVLAAHGLACCLGLEADYDRCQCLLDRVGEVRPNCSYVR 622


>gi|26006103|dbj|BAC41395.1| mKIAA0155 protein [Mus musculus]
          Length = 386

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 63/93 (67%)

Query: 693 QNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 752
           +NCLRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ 
Sbjct: 1   ENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRL 60

Query: 753 SASTLQKTRRTADEVRSTVAELENAVRVFSHLS 785
           + S L+  +    EV + V ELE A R FS+LS
Sbjct: 61  ATSVLKDEKSNLKEVLNAVKELELAHRYFSYLS 93


>gi|384208242|ref|YP_005593962.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
 gi|343385892|gb|AEM21382.1| putative TPR domain-containing protein [Brachyspira intermedia
           PWS/A]
          Length = 817

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 140/710 (19%), Positives = 274/710 (38%), Gaps = 91/710 (12%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
            E ++ EK   +I    +YN  S         +  KG   L  G  E+A   F+  +E  
Sbjct: 16  FENREYEKSIEYIDKVIFYNGDSY------DLYHNKGLSKLNLGLYEEAIKDFERAIELG 69

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
            D       +   +     Y +++E + R LQ++ +   + R+ +GLC   +    +A  
Sbjct: 70  DDGETVYYDRGLAKLYLSFYGEAIEDFNRVLQINNNDIDS-RVNVGLCYLYMKNYKEAIN 128

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI--YPYCAMALNYLAN 231
            +   +   P+N+ +     +     ++     + +    +  E+      +MA NY+  
Sbjct: 129 IYDEVIADFPDNINSYNNRGLCKFYLSQ---FEEAINDFNKVIELDKNSTASMAYNYIGL 185

Query: 232 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
             +   +     +  E A+ +    P   ++Y+N+A   HS G+++   L Y+    EI+
Sbjct: 186 CKYHLDEITEALKYYEKAIEI---NPNLINAYHNIALIKHS-GEFDDEALSYLNKALEID 241

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
             +  +  Y  +  ++L L  +  A     K+LE+YPD+      +G+I +  G +E++ 
Sbjct: 242 PGN--LETYLKIYSIKLDLELYDEANEYLNKILEMYPDDLYVYDRIGNIKIDAGYMEESL 299

Query: 352 ELLRKAAKIDPRDAQAFIDLGELL---------------------ISSDT-------GAA 383
           E L+KA +I+P    A+ D+   L                      S+DT         A
Sbjct: 300 EYLKKALEINPNFIDAYYDIAFALHKLDLNNEALEYLEKALQIYPNSADTYFKMFLVKRA 359

Query: 384 LDAFKTARTLLKKAGE--EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 441
           L  ++ A + L K  E     + + N I +I  E   ++ A      A         LD 
Sbjct: 360 LRDYEGALSCLNKILEIDNTDVVIYNEIALIKVELELYDEALSYLNKA---------LDI 410

Query: 442 KTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASV 501
            T    I  S  ++ +         +N    +EL  +  +  +N+     ++HD   +  
Sbjct: 411 DTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQ 470

Query: 502 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN 561
            Y   L     Y  AY+ L  I     N + +I+   +AL++N  Y  A   +   E+  
Sbjct: 471 YYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSL 530

Query: 562 DDWVKAKETFRAASD-ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYT 620
           +D+  + E F  A +   D  + Y  + L                  +A + +KA E Y 
Sbjct: 531 EDYKNSLEDFNKALELGYDEAEIYINIGL--------------IYSRQAIY-DKAIEYYN 575

Query: 621 RVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF 680
           +V+  + + + A       L+   +++ + +++ +V     G+              VY+
Sbjct: 576 KVLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRMYPGNF------------DVYY 623

Query: 681 AQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 730
            +G        Y+  +R F       I++ +   HY A  ++ C K  L+
Sbjct: 624 ERGYTKYRASKYEEAIRDF------DIIINVNSKHYNAYYYRGCSKKYLK 667



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 94/443 (21%), Positives = 170/443 (38%), Gaps = 67/443 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  Y NKA  ID +    +   G +   K + E+A   F   +E +     A        
Sbjct: 400 ALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAY 459

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           +    Y +S+++Y +AL+++P    A  + +GL ++ LG   +A   +++AL+++P+   
Sbjct: 460 YEMHDYENSIQYYNKALEINPQYASA-YINLGLIKHNLGNYKEAIDYYKKALEINPDYSL 518

Query: 188 AL--VALAVMDLQ--ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           A   +ALA M L+   N      K +E      EIY           N      +  + +
Sbjct: 519 AYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIY----------INIGLIYSRQAIYD 568

Query: 244 QLTETALAVTNHGPTKSHSYYNLA--------------------RSYHSKGD--YEKAGL 281
           +  E    V    P K ++YYN+A                    R Y    D  YE+   
Sbjct: 569 KAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRMYPGNFDVYYERGYT 628

Query: 282 YYMAS-----------VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
            Y AS           +  +N  H   + Y G  +  LK  ++  A+ +F+K +E   +N
Sbjct: 629 KYRASKYEEAIRDFDIIINVNSKHYNAYYYRGCSKKYLK--NYDEAIKDFDKAIEYNANN 686

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG--ELLISSDTGAALDAFK 388
            +        Y  L +  ++ E   KA ++   D   +I     + L+S +T +  +   
Sbjct: 687 SDFYSERASCYDYLNKYRESIENYDKAIELKDDDWFLYILRAKEKFLLSKETNSE-NKTN 745

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI 448
             ++   K    +  ++ ++      EK       +S+K AL D  +L +     K    
Sbjct: 746 DKKSFFNK----IISKIASSKNYTDLEKSALNDLEKSYKLALEDEFYLMVFKDIIKD--- 798

Query: 449 DASASMLQFKDMQLFHRFENDGN 471
                  +F ++ L   F  D N
Sbjct: 799 -------EFTNIDLAAEFCKDNN 814


>gi|355570991|ref|ZP_09042261.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
           tarda NOBI-1]
 gi|354826273|gb|EHF10489.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
           tarda NOBI-1]
          Length = 1104

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 145/309 (46%), Gaps = 26/309 (8%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR- 130
           +++A  ID      ++G+GQ     G+ E+A   +   +  +  +V AL  +A  E++R 
Sbjct: 633 FSRALEIDPRLFDAYIGRGQERSRCGQPEKAVEDYSNAIRLNGRSVEALTARAT-EYSRL 691

Query: 131 GRYSDSLEFYKRALQVHPSCPG--AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           GRY D++E   RAL+     PG  +I L  GL   +LG + +A   + + +++DP + +A
Sbjct: 692 GRYEDAVEDLSRALE---QAPGDVSILLARGLLYERLGMIDEAIADYSKVIEIDPGHEKA 748

Query: 189 LVALAVMDLQANEAAGIRKGMEK-----MQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
            +       + N  AG  KG+         R  EI P  A+A  +      +  +  L E
Sbjct: 749 YIN------RGNLLAG--KGLSSEAIADFSRVIEINPGNAVA--FYNRGIEYGERGMLDE 798

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            + +   AV    P  + +YYN   +YH KG  E+A   Y  ++ E++  +E    Y   
Sbjct: 799 AIMDLGKAVMLR-PDLAEAYYNRGVAYHKKGMLEEAIADYNRAL-ELSPDNEKA--YNNR 854

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G     LG +  A+ +F + +EI PDN       G  Y + G IEKA E   +A  I P 
Sbjct: 855 GNAHAALGMYDEAIEDFSRAIEINPDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIKPD 914

Query: 364 DAQAFIDLG 372
            A+A+ + G
Sbjct: 915 LAEAYYNRG 923



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 144/344 (41%), Gaps = 35/344 (10%)

Query: 38   IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
            ++IL A G+ Y  LG I+            A   Y+K   ID      ++ +G LL  KG
Sbjct: 712  VSILLARGLLYERLGMIDE-----------AIADYSKVIEIDPGHEKAYINRGNLLAGKG 760

Query: 98   EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
               +A + F  V+E +  N  A   +      RG   +++    +A+ + P    A    
Sbjct: 761  LSSEAIADFSRVIEINPGNAVAFYNRGIEYGERGMLDEAIMDLGKAVMLRPDLAEAY-YN 819

Query: 158  IGLCRYKLGQLGKARQAFQRALQLDPENVEAL-------VALAVMDLQANEAAGIRKGME 210
             G+  +K G L +A   + RAL+L P+N +A         AL + D          + +E
Sbjct: 820  RGVAYHKKGMLEEAIADYNRALELSPDNEKAYNNRGNAHAALGMYD----------EAIE 869

Query: 211  KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
               RA EI P    A     N     G+  L+E+  E         P  + +YYN   +Y
Sbjct: 870  DFSRAIEINPDNPTAY---YNRGIEYGKKGLIEKAMEDFSRAIAIKPDLAEAYYNRGVAY 926

Query: 271  HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
                 YE+A   Y  ++ +I+  +E    Y   G     LG +  A+++F + +EI PDN
Sbjct: 927  QRVERYEEAIADYSRAI-QISPANEKA--YNNRGNAHAALGMYNEAVSDFSRAIEINPDN 983

Query: 331  CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
                   G  Y + G  ++A     KA  + P  A+A+ ++G +
Sbjct: 984  PTAYYNRGIEYGKKGFFDEAIADFSKAVGLRPDLAEAYYNMGNI 1027



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 12/260 (4%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y+ A RI+ H    +  +G         E A S F   +  D D V A   +  +E
Sbjct: 56  AIEDYSAAIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRG-LE 114

Query: 128 FNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
           + R G Y  ++  + +A+ ++PS   A     G+   + G   KA + + RA +LDP   
Sbjct: 115 YARIGEYELAIADFSKAISLNPSYAAAYN-NRGVIHARRGMHEKAIEDYTRAFELDPSFS 173

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
           EAL    +   + +        +    RA EI P  A   + L N     G+    E   
Sbjct: 174 EALFNRGI---EFSRLGHFEDAVADYTRALEITPEKA---DILYNRGLAYGKLGQSEAAI 227

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
              L      P+ + ++ NL   Y   G  E A  +Y  ++ EIN    F+  Y   G +
Sbjct: 228 ADYLQCLEKNPSYAEAHNNLGVEYSHLGLLETALDHYAKAI-EINP--SFVEAYNNRGVL 284

Query: 307 QLKLGDFRSALTNFEKVLEI 326
             ++G F  A+  F + LEI
Sbjct: 285 FNRMGRFDEAIAEFSRALEI 304



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 142/360 (39%), Gaps = 38/360 (10%)

Query: 35  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQY------------YNKASRIDMHE 82
           Y+R+ +++     YT+  KI  K    E  F    +Y            + KA  I    
Sbjct: 416 YDRLGMVDEAIADYTHALKINPKF--AEACFARGIEYQKANLSDRAISEFTKALEIRPAY 473

Query: 83  PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 142
           P     +G      G  + A   F   LE       AL+ +A     +G    + E    
Sbjct: 474 PDALYQRGCEFAKIGLSDMAVRDFSRALEIRGQFFEALVARAEQYSRKGLSERATEDLTA 533

Query: 143 ALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 201
           AL + P+  G  +R GI   R   G++ +A   F +A+ ++P N +A    A++ LQ  +
Sbjct: 534 ALALEPTSAGLYVRRGIEQSR--SGKIEEALADFSKAIGMEPSNADAYFQRALI-LQ--K 588

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----- 256
                +    + R  E+ P  A A       + F G+     +L  ++ A+ +       
Sbjct: 589 QGRFEESASDISRVIELRPADAQA-------YLFRGRQ--NSELGNSSEAIADFSRALEI 639

Query: 257 -PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
            P    +Y    +     G  EKA   Y  +++   +  E +           +LG +  
Sbjct: 640 DPRLFDAYIGRGQERSRCGQPEKAVEDYSNAIRLNGRSVEALT---ARATEYSRLGRYED 696

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           A+ +  + LE  P +   L A G +Y +LG I++A     K  +IDP   +A+I+ G LL
Sbjct: 697 AVEDLSRALEQAPGDVSILLARGLLYERLGMIDEAIADYSKVIEIDPGHEKAYINRGNLL 756



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 122/317 (38%), Gaps = 55/317 (17%)

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
           G I    G+  +K G   +A   + RA++++P++ EA     V     ++  G    +E 
Sbjct: 3   GEIYYNRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPG---AIED 59

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLA 267
              A  I P+ + A       F+  G  + +    E A++      N       +YYN  
Sbjct: 60  YSAAIRINPHFSEA-------FYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRG 112

Query: 268 RSYHSKGDYEKA----------------------------GLYYMASVKEINKPHE---- 295
             Y   G+YE A                            G++  A +++  +  E    
Sbjct: 113 LEYARIGEYELAIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKA-IEDYTRAFELDPS 171

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
           F    +  G    +LG F  A+ ++ + LEI P+  + L   G  Y +LGQ E A     
Sbjct: 172 FSEALFNRGIEFSRLGHFEDAVADYTRALEITPEKADILYNRGLAYGKLGQSEAAIADYL 231

Query: 356 KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIH 413
           +  + +P  A+A  +LG         + L   +TA     KA E  P  +E  NN GV+ 
Sbjct: 232 QCLEKNPSYAEAHNNLGVEY------SHLGLLETALDHYAKAIEINPSFVEAYNNRGVLF 285

Query: 414 FEKGEFESAHQSFKDAL 430
              G F+ A   F  AL
Sbjct: 286 NRMGRFDEAIAEFSRAL 302



 Score = 40.4 bits (93), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 32/303 (10%)

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           YYN   +YH KG +++A   Y  ++ EIN P +    Y+  G  +    D+  A+ ++  
Sbjct: 6   YYNRGIAYHKKGLFDEAIADYTRAI-EIN-PDD-AEAYHNRGVAKAGKHDYPGAIEDYSA 62

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTG 381
            + I P   E     G  Y  L + E A      A  +D    +A+ + G E     +  
Sbjct: 63  AIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYE 122

Query: 382 AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 441
            A+  F  A +L             NN GVIH  +G  E A + +               
Sbjct: 123 LAIADFSKAISLNPSYA-----AAYNNRGVIHARRGMHEKAIEDY--------------- 162

Query: 442 KTKTYVIDASASMLQFKDMQLFHR---FEND----GNHVELPWNKVTVLFNLARLLEQIH 494
            T+ + +D S S   F     F R   FE+        +E+   K  +L+N      ++ 
Sbjct: 163 -TRAFELDPSFSEALFNRGIEFSRLGHFEDAVADYTRALEITPEKADILYNRGLAYGKLG 221

Query: 495 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 554
            + AA   Y   L K   Y +A+  L         L+ +++   +A+++N  +  A +  
Sbjct: 222 QSEAAIADYLQCLEKNPSYAEAHNNLGVEYSHLGLLETALDHYAKAIEINPSFVEAYNNR 281

Query: 555 GDL 557
           G L
Sbjct: 282 GVL 284


>gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 550

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 174/414 (42%), Gaps = 71/414 (17%)

Query: 40  ILNALGVYYT-----------YLGKIETKQREKEEHFILATQYYN------------KAS 76
           I N LG+ Y            Y   ++T +     +F LA  YY             KAS
Sbjct: 136 IYNLLGIIYERNNMDEKAEEYYKKCLQTNENYLGAYFNLAQVYYKLNKMQNAKLCLEKAS 195

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
            I   EP  +   GQL     + +QA   F+  +E D +N+ AL      +F      ++
Sbjct: 196 IIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTIEIDPENINALFELGVTQFQIEELDEA 255

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
           +  +K+ L + P    A+   + +  +    +  A++  ++A+++ P NV+A + L    
Sbjct: 256 IHNFKKTLMIQPDHFNALFKLVEI-YHSADLIEYAQEYLEQAIKIQPHNVKANLIL---- 310

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
                 AGI                      YLA       +     QL E  + V +  
Sbjct: 311 ------AGI----------------------YLAQKMILEAK-----QLCEQVIKVDSRN 337

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
              + + Y L   Y  + + +KA +     V +IN P ++I     LGQ+  + G    A
Sbjct: 338 ---ADALYYLGIIYQKENNIQKA-ISIFKEVTQIN-PTKYI-AQIQLGQLYHQQGKVEDA 391

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           + +++++L++ P+N   L  L  +  +LG   +A+ L +KA  +DP   + + +LG  LI
Sbjct: 392 IISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELLCKKALAVDPNAYEPYHNLG--LI 449

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             D      A K  ++ LK   +    E  NN+G I++EKG  + A   F++A+
Sbjct: 450 YQDKLLYEQAIKFYQSALKSNPD--CAEAYNNLGCIYYEKGNLKEAINQFEEAI 501



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 104/465 (22%), Positives = 193/465 (41%), Gaps = 77/465 (16%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL--DPENVE 187
           +G   +++  +++A++++P     ++  +G    ++ +L +A + F+++L    DP  + 
Sbjct: 79  KGFNQEAILCFQKAIELNPQL-NHLKQQLGYLCLEVDRLDEAIKYFEQSLGFSSDPYEIY 137

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA-LNYLANHFFFTGQHFLVEQLT 246
            L+ +             R  M+  ++A E Y  C     NYL  +F     ++ + ++ 
Sbjct: 138 NLLGIIYE----------RNNMD--EKAEEYYKKCLQTNENYLGAYFNLAQVYYKLNKMQ 185

Query: 247 ETALAVTNHG---PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
              L +       P++   +  L +      D+++A  Y+  ++ EI+   E I   + L
Sbjct: 186 NAKLCLEKASIIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTI-EIDP--ENINALFEL 242

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G  Q ++ +   A+ NF+K L I PD+   L  L  IY     IE AQE L +A KI P 
Sbjct: 243 GVTQFQIEELDEAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIKIQPH 302

Query: 364 DAQAFI----------------DLGELLISSDTGAALDAF-------------KTARTLL 394
           + +A +                 L E +I  D+  A DA              + A ++ 
Sbjct: 303 NVKANLILAGIYLAQKMILEAKQLCEQVIKVDSRNA-DALYYLGIIYQKENNIQKAISIF 361

Query: 395 KKAGEEVPIEVLNNI--GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 452
           K+  +  P + +  I  G ++ ++G+ E A  S+K          +L  +   Y      
Sbjct: 362 KEVTQINPTKYIAQIQLGQLYHQQGKVEDAIISYK---------RILQVQPNNYFALNYL 412

Query: 453 SML-----QFKDMQLFHR--FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 505
           S L      F   +L  +     D N  E P++ + +++    L EQ      A   Y+ 
Sbjct: 413 SFLLYELGDFNQAELLCKKALAVDPNAYE-PYHNLGLIYQDKLLYEQ------AIKFYQS 465

Query: 506 ILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
            L    D  +AY  L  I   + NL+ +I    EA+K N K+  A
Sbjct: 466 ALKSNPDCAEAYNNLGCIYYEKGNLKEAINQFEEAIKANPKFAEA 510



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 171/403 (42%), Gaps = 48/403 (11%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG + L++     A+  FE+ L    D  E    LG IY +    EKA+E  +K  + + 
Sbjct: 106 LGYLCLEVDRLDEAIKYFEQSLGFSSDPYEIYNLLGIIYERNNMDEKAEEYYKKCLQTNE 165

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 420
               A+ +L ++         L+  + A+  L+KA    P   EV N +G +  E  +++
Sbjct: 166 NYLGAYFNLAQVYYK------LNKMQNAKLCLEKASIIFPSEPEVFNKLGQLCQEMEDWQ 219

Query: 421 SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM-QLFHRFEN----DGNHVEL 475
            A   F+  +        +D +    + +   +  Q +++ +  H F+       +H   
Sbjct: 220 QAIGYFEKTIE-------IDPENINALFELGVTQFQIEELDEAIHNFKKTLMIQPDHFNA 272

Query: 476 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY-VDAYLRLAAIAKARNNLQLSI 534
            + K+  +++ A L+E   + +  ++       K Q + V A L LA I  A+  +  + 
Sbjct: 273 LF-KLVEIYHSADLIEYAQEYLEQAI-------KIQPHNVKANLILAGIYLAQKMILEAK 324

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY 594
           +L  + +KV+ +  +AL  LG +  K ++  KA   F+  +     K   A + LG   +
Sbjct: 325 QLCEQVIKVDSRNADALYYLGIIYQKENNIQKAISIFKEVTQINPTK-YIAQIQLGQLYH 383

Query: 595 FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 654
                        +   +E A   Y R++    +N +A N    +L E G F+ + +L  
Sbjct: 384 -------------QQGKVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQA-ELLC 429

Query: 655 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
           +   A   + +    + + NL  +Y  +  +  A+K YQ+ L+
Sbjct: 430 KKALAVDPNAY----EPYHNLGLIYQDKLLYEQAIKFYQSALK 468


>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
 gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 632

 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 25/338 (7%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y YLG I  + + K E  I A   YN A  I+ +    +   G  L  +G++E+A +A+ 
Sbjct: 63  YRYLG-IALRNQGKLEEAIAA---YNTAIEINPNYAEVYNNLGVALYYQGKLEEAIAAYN 118

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             +E + +             N+G+  +++  Y +A++++P+   A  +G+G+  Y  G+
Sbjct: 119 TAIEINPNYAEVYSNLGFALSNQGKLEEAIAAYNKAIEINPNYAFA-YIGLGIALYNQGK 177

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
           L +A  A+ +A++++P   E    L        +   + + +     A EI P  A A N
Sbjct: 178 LEEAIAAYNKAIEINPNYAEVYSNLGFALYNQGK---LEEAIAAYNTAIEINPNDAFAYN 234

Query: 228 YLANHFFFTGQHFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
            L      + Q  L E +    TA+ +    P  + +Y NL  + +++G  E+A   Y  
Sbjct: 235 NLG--IALSNQGKLEEAIAAYNTAIEIN---PNDAFAYNNLGVALYNQGKLEEAIAAYNT 289

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE-----TL--KALG 338
           ++ EIN P++  F Y GLG      G    A+  + K L +     +     TL    LG
Sbjct: 290 AI-EIN-PND-AFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHTLAHTTLG 346

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           +   Q G++E+A     KA KIDP +  A  +L E LI
Sbjct: 347 YALQQQGKLEEAIAEYEKALKIDPNNTTAQNNLKEALI 384



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 149/346 (43%), Gaps = 39/346 (11%)

Query: 7   KQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 66
            QGK+E+   I    ++ EI+  YA+V        N LGV   Y GK+E           
Sbjct: 72  NQGKLEE--AIAAYNTAIEINPNYAEV-------YNNLGVALYYQGKLEE---------- 112

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
            A   YN A  I+ +    +   G  L  +G++E+A +A+   +E + +   A +G    
Sbjct: 113 -AIAAYNTAIEINPNYAEVYSNLGFALSNQGKLEEAIAAYNKAIEINPNYAFAYIGLGIA 171

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            +N+G+  +++  Y +A++++P+    +   +G   Y  G+L +A  A+  A++++P + 
Sbjct: 172 LYNQGKLEEAIAAYNKAIEINPNY-AEVYSNLGFALYNQGKLEEAIAAYNTAIEINPNDA 230

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            A   L +     +    + + +     A EI P  A A N L    +  G+        
Sbjct: 231 FAYNNLGIA---LSNQGKLEEAIAAYNTAIEINPNDAFAYNNLGVALYNQGK-------L 280

Query: 247 ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASV----KEINKPHEFIF 298
           E A+A  N      P  + +Y  L  + H +G  E+A   Y  ++    K+ ++      
Sbjct: 281 EEAIAAYNTAIEINPNDAFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHTL 340

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
            +  LG    + G    A+  +EK L+I P+N      L    +QL
Sbjct: 341 AHTTLGYALQQQGKLEEAIAEYEKALKIDPNNTTAQNNLKEALIQL 386



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 88/396 (22%), Positives = 167/396 (42%), Gaps = 33/396 (8%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +G   +A   F+ V++ + +N  A         N+G+  +++  Y  A++++P+    + 
Sbjct: 39  EGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTAIEINPNY-AEVY 97

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
             +G+  Y  G+L +A  A+  A++++P   E    L       +    + + +    +A
Sbjct: 98  NNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLG---FALSNQGKLEEAIAAYNKA 154

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYH 271
            EI P  A A   L    +  G+        E A+A  N      P  +  Y NL  + +
Sbjct: 155 IEINPNYAFAYIGLGIALYNQGK-------LEEAIAAYNKAIEINPNYAEVYSNLGFALY 207

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
           ++G  E+A   Y  ++ EIN P++  F Y  LG      G    A+  +   +EI P++ 
Sbjct: 208 NQGKLEEAIAAYNTAI-EIN-PND-AFAYNNLGIALSNQGKLEEAIAAYNTAIEINPNDA 264

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA---ALDAFK 388
                LG      G++E+A      A +I+P DA A+I LG  L   D G    A+ A+ 
Sbjct: 265 FAYNNLGVALYNQGKLEEAIAAYNTAIEINPNDAFAYIGLGIAL--HDQGKLEEAIAAYN 322

Query: 389 TARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 446
              +L  K  +   +  L    +G    ++G+ E A   ++ AL        +D    T 
Sbjct: 323 KTLSLADKKADRASVHTLAHTTLGYALQQQGKLEEAIAEYEKALK-------IDPNNTTA 375

Query: 447 VIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
             +   +++Q   ++L+           +PW++  +
Sbjct: 376 QNNLKEALIQLT-IKLYPSLTVVDEQKHIPWDEPLI 410



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 17/160 (10%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG   + Q + EE    A   YN A  I+ ++   +   G  L  +G++E+A +A+ 
Sbjct: 233 YNNLGIALSNQGKLEE----AIAAYNTAIEINPNDAFAYNNLGVALYNQGKLEEAIAAYN 288

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV------HPSCPGAIRLGIGLC 161
             +E + ++  A +G      ++G+  +++  Y + L +        S        +G  
Sbjct: 289 TAIEINPNDAFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHTLAHTTLGYA 348

Query: 162 RYKLGQLGKARQAFQRALQLDPENV-------EALVALAV 194
             + G+L +A   +++AL++DP N        EAL+ L +
Sbjct: 349 LQQQGKLEEAIAEYEKALKIDPNNTTAQNNLKEALIQLTI 388



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 173/455 (38%), Gaps = 84/455 (18%)

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPI 403
           G   +A+ + R+  KI+P +A A+  LG  L +      A+ A+ TA  +     E    
Sbjct: 40  GNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTAIEINPNYAE---- 95

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
            V NN+GV  + +G+ E A  ++  A+                                 
Sbjct: 96  -VYNNLGVALYYQGKLEEAIAAYNTAI--------------------------------- 121

Query: 464 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 523
              E + N+ E+  N    L N  +L E I         Y   +    +Y  AY+ L   
Sbjct: 122 ---EINPNYAEVYSNLGFALSNQGKLEEAI-------AAYNKAIEINPNYAFAYIGLGIA 171

Query: 524 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA--TDGK 581
              +  L+ +I   N+A+++N  Y    S LG   L N    K +E   A + A   +  
Sbjct: 172 LYNQGKLEEAIAAYNKAIEINPNYAEVYSNLG-FALYNQG--KLEEAIAAYNTAIEINPN 228

Query: 582 DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 641
           D++A  +LG      AL N+ +        LE+A   Y   I  + ++ +A N  GV L 
Sbjct: 229 DAFAYNNLG-----IALSNQGK--------LEEAIAAYNTAIEINPNDAFAYNNLGVALY 275

Query: 642 EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 701
            +G+ + +   +    E      F      +I L      QG    A+  Y   L     
Sbjct: 276 NQGKLEEAIAAYNTAIEINPNDAF-----AYIGLGIALHDQGKLEEAIAAYNKTLSLADK 330

Query: 702 NTDAQILLYLARTH--YEAEQWQDCKKSLL---RAIHLAPSNYTLRFDAGVAMQKFSAST 756
             D   +  LA T   Y  +Q    ++++    +A+ + P+N T + +   A+ + +   
Sbjct: 331 KADRASVHTLAHTTLGYALQQQGKLEEAIAEYEKALKIDPNNTTAQNNLKEALIQLTIK- 389

Query: 757 LQKTRRTADEVR------STVAELENAVRVFSHLS 785
           L  +    DE +        + EL   VR+ + +S
Sbjct: 390 LYPSLTVVDEQKHIPWDEPLIKELRATVRIIALVS 424


>gi|427739371|ref|YP_007058915.1| hypothetical protein Riv7116_6007 [Rivularia sp. PCC 7116]
 gi|427374412|gb|AFY58368.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
          Length = 471

 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 122/305 (40%), Gaps = 56/305 (18%)

Query: 81  HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 140
           H    W  +G  L   G++++A S+  I +E   D + ALL Q  V   + +   +L  +
Sbjct: 73  HSHYIWYERGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLLQGIVMLEQKKLEPALISF 132

Query: 141 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQ 198
           ++ + + P+ P A     GL  Y+LGQL  A   F +A+Q  P+   A     + + DL+
Sbjct: 133 EKIILIKPNYPKA-WYEKGLTLYELGQLEDALMCFDKAIQYKPKFDLAWYRKGITLFDLE 191

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 258
             E+A I       ++A EI P                                      
Sbjct: 192 QLESALIC-----FEKAIEIEP-------------------------------------- 208

Query: 259 KSHSYYNLARSYHSKG----DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
                 N A +++ KG      EK         K I   H+    +Y  G     LG+F 
Sbjct: 209 ------NDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNHDLNLAWYHKGIALFDLGNFE 262

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           SALT FEK ++I PD  E L     I   LGQ+E   +   +  K+DP++ Q    LG  
Sbjct: 263 SALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTIDTFNQVLKLDPQNCQVRNRLGTA 322

Query: 375 LISSD 379
           L  S+
Sbjct: 323 LGKSE 327



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 119/298 (39%), Gaps = 54/298 (18%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           + KA  I+ ++ +TW  KG  L    ++E A   F   +E + D   A   +    F+ G
Sbjct: 200 FEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNHDLNLAWYHKGIALFDLG 259

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCR-----YKLGQLGKARQAFQRALQLDPENV 186
            +  +L  +++A+Q+ P    A      LCR     Y LGQL      F + L+LDP+N 
Sbjct: 260 NFESALTCFEKAIQIQPDFSEA------LCRKAEILYSLGQLEDTIDTFNQVLKLDPQNC 313

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
           +    L        ++      +    +  EI  +     NY A+ F             
Sbjct: 314 QVRNRLGT---ALGKSERYEDAILAFDKVIEIDSH-----NYAAHCF------------- 352

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
                       + ++ + L R+  +     KA         EIN  ++  +  YG   V
Sbjct: 353 ------------RGYTLHKLRRNEDAIAALNKA--------IEINPNYDLAWKIYG--SV 390

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
             KL     A+  F+K L++ PD    L      YV L +I+ A + L++A  I+P++
Sbjct: 391 LHKLKRNEEAILFFDKALDLSPDQPNILYDKACCYVALNKIDLAIQNLQQAININPKE 448


>gi|118366677|ref|XP_001016554.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89298321|gb|EAR96309.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 564

 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 147/312 (47%), Gaps = 24/312 (7%)

Query: 68  ATQYYNKASRIDMHEPSTW-VGK-GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A  ++ KA  I +++  +W  GK G   L K   + A + F+   + D  +  A      
Sbjct: 94  AITFFQKA--IQLNDKDSWAFGKLGYSFLKKKMYDDAFTFFQKAAQLDPQDSSAFANLGY 151

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           + + +  Y D++ F+++A+Q+ P C  A  R+G    + ++     A   FQ+++QLDP+
Sbjct: 152 LFYKKEMYDDAITFFQKAVQLDPKCSWAFGRMGYVFLKREMND--DAISFFQKSVQLDPK 209

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
           +  A   L  + L+          ++ +++A ++ P  + AL  L       G  FL +Q
Sbjct: 210 DSWAFGQLGYLFLKKEM---YDYAIKFLKKAVQLNPKDSQALGKL-------GYTFLKKQ 259

Query: 245 LTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           + + A+          P  S +   L  S+  K  Y+ A  ++  S+ ++N    + F  
Sbjct: 260 MYDYAIKFLKKTVLLYPKDSWALGKLGYSFLKKEMYDDAITFFQKSI-QLNDKDSWAFG- 317

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
             LG   LK   +  A+T F+K +++   +      LG+ +++    + A   L+KAA++
Sbjct: 318 -KLGYSFLKKQMYDDAITFFQKAIQLNDKDSWAFGKLGYSFLKKEMYDDAITFLQKAAQL 376

Query: 361 DPRDAQAFIDLG 372
           DP+D+ AF +LG
Sbjct: 377 DPKDSLAFANLG 388



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/309 (20%), Positives = 140/309 (45%), Gaps = 20/309 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  ++ K+ ++D  +   +   G L L K   + A    K  ++ +  +  AL       
Sbjct: 196 AISFFQKSVQLDPKDSWAFGQLGYLFLKKEMYDYAIKFLKKAVQLNPKDSQALGKLGYTF 255

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
             +  Y  +++F K+ + ++P    A+ +LG    + ++     A   FQ+++QL+ ++ 
Sbjct: 256 LKKQMYDYAIKFLKKTVLLYPKDSWALGKLGYSFLKKEM--YDDAITFFQKSIQLNDKDS 313

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            A   L    L+          +   Q+A ++    + A   L       G  FL +++ 
Sbjct: 314 WAFGKLGYSFLKKQM---YDDAITFFQKAIQLNDKDSWAFGKL-------GYSFLKKEMY 363

Query: 247 ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           + A+          P  S ++ NL  S+  K  Y+ A  ++  +V +++    + F   G
Sbjct: 364 DDAITFLQKAAQLDPKDSLAFANLGYSFMKKEMYDDAIKFFQKAV-QLDPKCSWAFGRMG 422

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
              ++ ++ D  +A+T F+K +++ P +    + LG++++Q    + A + L+KA ++DP
Sbjct: 423 YVFLKKEMND--AAITFFQKTVQLDPKDSWAFEQLGYLFLQKEMYDYAIKFLKKAVQLDP 480

Query: 363 RDAQAFIDL 371
           + + A ++L
Sbjct: 481 KVSNAPLNL 489



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 9/146 (6%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  S ++  L   +  K  Y+ A   +  +++  +K     + +  LG   LK   +  A
Sbjct: 38  PKDSQAFRQLGYQFLKKQMYDDAITLFQKAIQLDDKDS---WAFGKLGYSFLKKKMYDDA 94

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           +T F+K +++   +      LG+ +++    + A    +KAA++DP+D+ AF +LG L  
Sbjct: 95  ITFFQKAIQLNDKDSWAFGKLGYSFLKKKMYDDAFTFFQKAAQLDPQDSSAFANLGYLFY 154

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVP 402
             +       +  A T  +KA +  P
Sbjct: 155 KKEM------YDDAITFFQKAVQLDP 174



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 106/253 (41%), Gaps = 25/253 (9%)

Query: 176 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
           Q  +QLDP++ +A   L    L+          +   Q+A ++    + A   L      
Sbjct: 31  QETVQLDPKDSQAFRQLGYQFLKKQM---YDDAITLFQKAIQLDDKDSWAFGKL------ 81

Query: 236 TGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
            G  FL +++ + A+             S ++  L  S+  K  Y+ A  ++  +  +++
Sbjct: 82  -GYSFLKKKMYDDAITFFQKAIQLNDKDSWAFGKLGYSFLKKKMYDDAFTFFQKAA-QLD 139

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
                 F    LG +  K   +  A+T F+K +++ P        +G+++++    + A 
Sbjct: 140 PQDSSAFA--NLGYLFYKKEMYDDAITFFQKAVQLDPKCSWAFGRMGYVFLKREMNDDAI 197

Query: 352 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNI 409
              +K+ ++DP+D+ AF  LG L +  +       +  A   LKKA +  P   + L  +
Sbjct: 198 SFFQKSVQLDPKDSWAFGQLGYLFLKKEM------YDYAIKFLKKAVQLNPKDSQALGKL 251

Query: 410 GVIHFEKGEFESA 422
           G    +K  ++ A
Sbjct: 252 GYTFLKKQMYDYA 264


>gi|94969466|ref|YP_591514.1| hypothetical protein Acid345_2439 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551516|gb|ABF41440.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 448

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 140/309 (45%), Gaps = 26/309 (8%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           F+ G+Y DS   Y++A+++H     A   G+G    KLG+  +A  AFQ A   DP+NV+
Sbjct: 114 FHEGKYEDSAGSYRKAIEIHDDYAEAYN-GLGAALLKLGKTDEAIGAFQSAASKDPKNVD 172

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           AL       L A +A   +  +  +++A  + P     L   AN          ++QL  
Sbjct: 173 ALSNAGAALLHAQKA---QDALPYLEKAKALKPDAPDVLENYAN---------ALQQLGR 220

Query: 248 TALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
           T  A+T +       P  + ++  L ++ ++   Y +A + +  S+       E +F   
Sbjct: 221 TNEAITEYEKALKGDPKSAVAWAQLGQTQYAAKQYPEAEVSFNKSLHLDAHQPEVLFL-- 278

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            LG    + G  + A+ ++EK L + PDN + L  LGH Y    +  +A +  +KA    
Sbjct: 279 -LGAAYTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRAIDSYQKALAAR 337

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
           P    A   LG   ++S+     DA  T R L+    ++  I    N     F KG F+ 
Sbjct: 338 PEFTHALAGLGACQLASNK--LDDAIATYRKLVPMQSDDPGIRF--NFATALFNKGNFKE 393

Query: 422 AHQSFKDAL 430
           A +++++A+
Sbjct: 394 AAENYREAV 402



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 130/334 (38%), Gaps = 33/334 (9%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y KA  I       + G G  LL  G+ ++A  AF+     D  NV AL        +  
Sbjct: 126 YRKAIEIHDDYAEAYNGLGAALLKLGKTDEAIGAFQSAASKDPKNVDALSNAGAALLHAQ 185

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           +  D+L + ++A  + P  P  +         +LG+  +A   +++AL+ DP++  A   
Sbjct: 186 KAQDALPYLEKAKALKPDAPDVLE-NYANALQQLGRTNEAITEYEKALKGDPKSAVAWAQ 244

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN---YLANH----FFFTGQHFLVEQ 244
           L                  + Q A + YP   ++ N   +L  H     F  G  +  + 
Sbjct: 245 LG-----------------QTQYAAKQYPEAEVSFNKSLHLDAHQPEVLFLLGAAYTEQG 287

Query: 245 LTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            ++ A+     G    P      YNL  +Y ++ +Y +A   Y    K +    EF    
Sbjct: 288 KSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRAIDSYQ---KALAARPEFTHAL 344

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            GLG  QL       A+  + K++ +  D+              G  ++A E  R+A K+
Sbjct: 345 AGLGACQLASNKLDDAIATYRKLVPMQSDDPGIRFNFATALFNKGNFKEAAENYREAVKL 404

Query: 361 DPRDAQAFIDLG-ELLISSDTGAALDAFKTARTL 393
            P  A A  +LG  LL  +D   A   F+ A  L
Sbjct: 405 KPDFAHAHYNLGMSLLRLNDAAGAKSEFEEAHRL 438



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 12/175 (6%)

Query: 40  ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 99
           +L  LG  YT  GK       KE     A   Y K   +    P      G     + E 
Sbjct: 275 VLFLLGAAYTEQGK------SKE-----AMHSYEKGLALKPDNPDGLYNLGHAYETQKEY 323

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            +A  +++  L A  +   AL G    +    +  D++  Y++ + +    PG IR    
Sbjct: 324 PRAIDSYQKALAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDDPG-IRFNFA 382

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
              +  G   +A + ++ A++L P+   A   L +  L+ N+AAG +   E+  R
Sbjct: 383 TALFNKGNFKEAAENYREAVKLKPDFAHAHYNLGMSLLRLNDAAGAKSEFEEAHR 437



 Score = 40.4 bits (93), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 21/312 (6%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG+     G +  +  ++ K +EI+ D  E    LG   ++LG+ ++A    + AA  DP
Sbjct: 109 LGRTLFHEGKYEDSAGSYRKAIEIHDDYAEAYNGLGAALLKLGKTDEAIGAFQSAASKDP 168

Query: 363 RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
           ++  A  + G  L+ +     AL   + A+ L   A      +VL N      + G    
Sbjct: 169 KNVDALSNAGAALLHAQKAQDALPYLEKAKALKPDA-----PDVLENYANALQQLGRTNE 223

Query: 422 AHQSFKDAL-GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
           A   ++ AL GD           K+ V  A     Q+   Q      +    + L  ++ 
Sbjct: 224 AITEYEKALKGD----------PKSAVAWAQLGQTQYAAKQYPEAEVSFNKSLHLDAHQP 273

Query: 481 TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
            VLF L     +   +  A   Y   L    D  D    L    + +     +I+   +A
Sbjct: 274 EVLFLLGAAYTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRAIDSYQKA 333

Query: 541 LKVNGKYPNALSMLGDLELKNDDWVKAKETFR----AASDATDGKDSYATLSLGNWNYFA 596
           L    ++ +AL+ LG  +L ++    A  T+R      SD    + ++AT      N+  
Sbjct: 334 LAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDDPGIRFNFATALFNKGNFKE 393

Query: 597 ALRNEKRAPKLE 608
           A  N + A KL+
Sbjct: 394 AAENYREAVKLK 405



 Score = 40.0 bits (92), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 81/387 (20%), Positives = 147/387 (37%), Gaps = 34/387 (8%)

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           D+R A+  F+K L +  D    ++ LG +   LG+  +++  L+KA ++ P DA A   L
Sbjct: 50  DYRGAVKQFKKALTVQSDYEPAVRNLGTVMEVLGKDAESETDLQKAIRLAPEDAVAHNSL 109

Query: 372 GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 431
           G  L     G   D+  + R  ++   +    E  N +G    + G+ + A  +F+ A  
Sbjct: 110 GRTLFHE--GKYEDSAGSYRKAIEIHDDYA--EAYNGLGAALLKLGKTDEAIGAFQSAAS 165

Query: 432 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 491
                   D K    + +A A++L  +  Q    +        L  +   VL N A  L+
Sbjct: 166 K-------DPKNVDALSNAGAALLHAQKAQDALPYLEKAK--ALKPDAPDVLENYANALQ 216

Query: 492 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 551
           Q+  T  A   Y   L        A+ +L     A      +    N++L ++   P  L
Sbjct: 217 QLGRTNEAITEYEKALKGDPKSAVAWAQLGQTQYAAKQYPEAEVSFNKSLHLDAHQPEVL 276

Query: 552 SMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 610
            +LG    +     +A  ++ +  +   D  D       G +N   A   +K  P     
Sbjct: 277 FLLGAAYTEQGKSKEAMHSYEKGLALKPDNPD-------GLYNLGHAYETQKEYP----- 324

Query: 611 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 670
              +A + Y + +       +A  G G       + D +   + ++    S       P 
Sbjct: 325 ---RAIDSYQKALAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDD-----PG 376

Query: 671 VWINLAHVYFAQGNFALAMKMYQNCLR 697
           +  N A   F +GNF  A + Y+  ++
Sbjct: 377 IRFNFATALFNKGNFKEAAENYREAVK 403


>gi|434388288|ref|YP_007098899.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428019278|gb|AFY95372.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 1675

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 40/393 (10%)

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           +A   YNK   +  H+   W   G +L+  G  E+A +++   LE   ++  A   +  V
Sbjct: 108 VALACYNKTIELQPHKQEAWANLGWVLVGLGRWEEALASYDRALELRPEDGEAWANRGWV 167

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            F  G Y  ++E  + +++++P    A     G   ++LG   +A  A+ RAL++ P++ 
Sbjct: 168 LFQLGYYQQAIENCECSIELNPEDRFAW-YQKGRALFELGSYDRALAAYDRALEISPDDS 226

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
             L     +     +   ++      +++  I P    A N      F  GQ        
Sbjct: 227 LTLSNKGWLLFHIGQ---VQAACGCYEQSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAY 283

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           + AL + +       ++ NL  ++  +  ++ A   Y A+   I    EF   +   G+V
Sbjct: 284 QKALELDSQ---FYQAWNNLGVAHFEQKSFQDALRCYRAA---IELAPEFQAAWCNQGKV 337

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
              LGDF +AL  + KV ++ PD        G+I   LG++E A        K+ P+ A+
Sbjct: 338 LFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAE 397

Query: 367 AFIDLGELLISSD-TGAALDAFKTARTL---------------------------LKKAG 398
            + + G +L+  D    AL  +  A TL                            +KA 
Sbjct: 398 GWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKAT 457

Query: 399 EEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA 429
           +  P   +  NN+G   F+ G+FE+A  S++ A
Sbjct: 458 QLEPSLSDAWNNLGKTQFKLGKFETAISSYEQA 490



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 144/369 (39%), Gaps = 26/369 (7%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y ++  ID  +   W   GQ+L   G++  A  A++  LE D     A        
Sbjct: 245 ACGCYEQSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAH 304

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           F +  + D+L  Y+ A+++ P    A     G   + LG    A  A+ +  QL P+   
Sbjct: 305 FEQKSFQDALRCYRAAIELAPEFQAAW-CNQGKVLFFLGDFEAALAAYTKVTQLQPD--- 360

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                   D   N    I   + +++ A   Y         LA  +   G   L+    +
Sbjct: 361 -------FDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQ 413

Query: 248 TALAV----TNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYG 302
            AL      T   P  + ++ +  ++    G YE A   Y  A+  E +        +  
Sbjct: 414 EALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDA----WNN 469

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG+ Q KLG F +A++++E+   +YP+       LG     L + E A     +  +I P
Sbjct: 470 LGKTQFKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQP 529

Query: 363 RDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
           +  QA+ + G      S    AL ++   RTL  K       +  NN+G + F  G +E 
Sbjct: 530 QFHQAWYNKGMAQFHLSQYDRALASYD--RTLKLKPDY---YQAWNNLGFVLFHLGRYEE 584

Query: 422 AHQSFKDAL 430
           A  S+   L
Sbjct: 585 AISSYNHTL 593



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           F +Y  G+   +LG +  AL  +++ LEI PD+  TL   G +   +GQ++ A     ++
Sbjct: 193 FAWYQKGRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYEQS 252

Query: 358 AKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 416
             IDP D  A+ + G++L       AA+DA++ A  L     +    +  NN+GV HFE+
Sbjct: 253 LHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALEL-----DSQFYQAWNNLGVAHFEQ 307

Query: 417 GEFESAHQSFKDAL 430
             F+ A + ++ A+
Sbjct: 308 KSFQDALRCYRAAI 321



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 150/380 (39%), Gaps = 53/380 (13%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           + Y G I     E E     A + Y   +++       W  +G +LL     ++A + + 
Sbjct: 365 WNYCGNILFHLGELEP----ALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYT 420

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
                   +  A   +    F+ GRY  +L+ Y++A Q+ PS   A    +G  ++KLG+
Sbjct: 421 QATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWN-NLGKTQFKLGK 479

Query: 168 LGKARQAFQRALQLDPENVEALVALAV--MDLQANEAA-----------------GIRKG 208
              A  ++++A +L PE   A   L V    LQ  EAA                    KG
Sbjct: 480 FETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQAWYNKG 539

Query: 209 MEKMQ------------RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH- 255
           M +              R  ++ P    A N L    F  G++       E A++  NH 
Sbjct: 540 MAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRY-------EEAISSYNHT 592

Query: 256 ---GPTKSHSYYNLARSYHSKG-DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
               P    ++YN   +   +G D E    Y  A   + N P    + ++  G+   KL 
Sbjct: 593 LKLNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPNDP----YLWHSRGRALAKLE 648

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
               ALT F++ ++I P+N E     G     LG+   A E   +  ++ P+D + +   
Sbjct: 649 RHAEALTCFDRSIDILPENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPEIWHSY 708

Query: 372 GELL-ISSDTGAALDAFKTA 390
           G +  +  +  AAL+++  A
Sbjct: 709 GIVQGLRQEYTAALESYDRA 728



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 143/349 (40%), Gaps = 33/349 (9%)

Query: 35   YERIAILNA-LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 93
            Y++   LNA   + + + GK   K +   E    A   Y +A  ++  +  +W   G   
Sbjct: 827  YQQALKLNASAAIVWHFQGKTLLKLQRYAE----ALTVYERAIELNSEDYHSWNDLGLTF 882

Query: 94   LAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
               G  E A  +++  +E   D  PA   LG+   +   G    +   Y+RA+  HP   
Sbjct: 883  AHLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQL--GDTDGASAAYERAIAYHPQ-D 939

Query: 152  GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
                 G+G   ++LG+L +A  A+++   L P+  EA                  + +++
Sbjct: 940  ADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAEAWY----------RQGKALQALQQ 989

Query: 212  MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
             +RA   Y       N   +  +  GQ        + ALA      T +    N A +++
Sbjct: 990  WERAVTCYERVTTLTNPSYDLCYSHGQVLTKLNRHQEALACYELALTLNK---NAADAWY 1046

Query: 272  SKGD-------YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
            +KG        +E A   Y  ++  ++  ++ I   Y   +VQ   GD+ +AL    + +
Sbjct: 1047 AKGQTLAALNRWEDANSCYERALS-LDPQNQSIL--YNQSRVQAAQGDWETALVACCQAI 1103

Query: 325  EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
            E+ PDN E     G I ++LG    A   L+ A  I P  A+++  LG+
Sbjct: 1104 ELDPDNPEIWTQHGQISIELGNYNTAVASLQTATGIAPESARSWALLGK 1152



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 151/388 (38%), Gaps = 37/388 (9%)

Query: 53   KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK----I 108
            +++  Q + E   +   Q    A  +D   P  W   GQ+ +  G    A ++ +    I
Sbjct: 1084 RVQAAQGDWETALVACCQ----AIELDPDNPEIWTQHGQISIELGNYNTAVASLQTATGI 1139

Query: 109  VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR-YKLGQ 167
              E+ R    ALLG+A  E++RG +  +L  Y++AL++ P      R      R Y LGQ
Sbjct: 1140 APESARSW--ALLGKA--EYHRGEFVAALAAYRQALELEPH-----RAETWYDRGYLLGQ 1190

Query: 168  LGKARQA---FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
            L +   A   + RA + DP    A         Q +E     + ++  QRA  + P    
Sbjct: 1191 LERWEDALISYDRATESDPNYALAWYQRGQAQFQLHEDPA--ENLQSYQRALTLDPNHPA 1248

Query: 225  ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
            A     N  F  G+     +  E AL +      K   YY      +  G  ++      
Sbjct: 1249 AWYQQGNLLFQLGRLEAAVESYERALQL------KPEDYYIWNNHGNVLGSLKRYDCAIE 1302

Query: 285  ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
            +  K +    EF   ++  G+    L  +  A    E+ LEI+P N +     G     +
Sbjct: 1303 SYDKALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNGRGMALQHI 1362

Query: 345  GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP-- 402
            G  ++A     ++ +ID  D Q +++ G  L        L  ++ A           P  
Sbjct: 1363 GCWQEALACYERSIEIDKLDPQVWLNRGTALFH------LHKYEDAIACYDNCAILNPDE 1416

Query: 403  IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            ++  +  G+   E G +++A  SF  AL
Sbjct: 1417 LQAYHYRGIASLELGRWDAAVASFDRAL 1444



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 143/709 (20%), Positives = 253/709 (35%), Gaps = 129/709 (18%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y +A +++      W  +G+ LL      +A + ++  +E + ++  +         + G
Sbjct: 827  YQQALKLNASAAIVWHFQGKTLLKLQRYAEALTVYERAIELNSEDYHSWNDLGLTFAHLG 886

Query: 132  RYSDSLEFYKRALQVHPSC-PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
            R  D+++ Y++A+++ P   P    LG  L   +LG    A  A++RA+   P++ +   
Sbjct: 887  RSEDAIDSYRQAIELQPDYHPAWHNLGKELT--QLGDTDGASAAYERAIAYHPQDADTWY 944

Query: 191  ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
             +  +  Q  E +      E M                           F  EQ      
Sbjct: 945  GMGNLLWQLGELS------EAM---------------------------FAYEQ------ 965

Query: 251  AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
             VTN  P ++ ++Y   ++  +   +E+A   Y       N  ++     Y  GQV  KL
Sbjct: 966  -VTNLKPDRAEAWYRQGKALQALQQWERAVTCYERVTTLTNPSYDLC---YSHGQVLTKL 1021

Query: 311  GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
               + AL  +E  L +  +  +   A G     L + E A     +A  +DP++     +
Sbjct: 1022 NRHQEALACYELALTLNKNAADAWYAKGQTLAALNRWEDANSCYERALSLDPQNQSILYN 1081

Query: 371  LGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKD 428
                   S   AA   ++TA     +A E  P   E+    G I  E G + +A  S + 
Sbjct: 1082 ------QSRVQAAQGDWETALVACCQAIELDPDNPEIWTQHGQISIELGNYNTAVASLQ- 1134

Query: 429  ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG------NHVELPWNKVTV 482
                          T T +   SA          +HR E           +EL  ++   
Sbjct: 1135 --------------TATGIAPESARSWALLGKAEYHRGEFVAALAAYRQALELEPHRAET 1180

Query: 483  LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL------SIEL 536
             ++   LL Q+     A     LI +      D    LA   + +   QL      +++ 
Sbjct: 1181 WYDRGYLLGQLERWEDA-----LISYDRATESDPNYALAWYQRGQAQFQLHEDPAENLQS 1235

Query: 537  VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW---- 592
               AL ++  +P A    G+L  +      A E++  A      +D Y   + GN     
Sbjct: 1236 YQRALTLDPNHPAAWYQQGNLLFQLGRLEAAVESYERALQ-LKPEDYYIWNNHGNVLGSL 1294

Query: 593  -NYFAALRNEKRAPKLEAT-------------HL---EKAKELYTRVIVQHTSNLYAANG 635
              Y  A+ +  +A  L+               HL   E+A   + R +  H  N    NG
Sbjct: 1295 KRYDCAIESYDKALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNG 1354

Query: 636  AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 695
             G+ L   G +  +   + +  E     +    P VW+N     F    +  A+  Y NC
Sbjct: 1355 RGMALQHIGCWQEALACYERSIE-----IDKLDPQVWLNRGTALFHLHKYEDAIACYDNC 1409

Query: 696  -------LRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS 737
                   L+ ++Y   A +         E  +W     S  RA+ L+P+
Sbjct: 1410 AILNPDELQAYHYRGIASL---------ELGRWDAAVASFDRALTLSPA 1449



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/338 (20%), Positives = 140/338 (41%), Gaps = 27/338 (7%)

Query: 78   IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
            I  H    W G+G  L   G  ++A + ++  +E D+ +    L +    F+  +Y D++
Sbjct: 1344 IHPHNAQIWNGRGMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAI 1403

Query: 138  EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA-------LV 190
              Y     ++P    A     G+   +LG+   A  +F RAL L P   E         V
Sbjct: 1404 ACYDNCAILNPDELQAYHYR-GIASLELGRWDAAVASFDRALTLSPALDEPEDRVRSQSV 1462

Query: 191  ALAVMDLQAN----------EAAGIRKGMEKMQRAFEIYPYCAMAL-NYLANHFFFTGQH 239
             +    L A+          +   +   +   ++A ++ P   +   N  A H     Q+
Sbjct: 1463 PVGKSPLTASTWNSRGTALFQLGNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQ-QY 1521

Query: 240  FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
                Q  +T+L +       + ++Y  A S  + G  + A    ++  K +    +FI  
Sbjct: 1522 AEALQCYQTSLKID---ANDAATWYKQAISQQALGRLDAA---IISLTKAVEIDPQFILA 1575

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
             Y  G + L   +F +ALT++E  L + PD      + G+  ++L  ++ A    ++A  
Sbjct: 1576 RYRRGNIYLLQREFEAALTDYEVTLNLDPDRAAAWNSRGNCLLELKILDNALFSFQQATG 1635

Query: 360  IDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKK 396
            ++P +++ + + G    S      A + ++ AR+L ++
Sbjct: 1636 LEPENSEYWFNQGRAHSSLQQWEEAENCYQQARSLTQR 1673



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 144/372 (38%), Gaps = 70/372 (18%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL--GQAC 125
           A + Y+KA     ++P  W  +G+ L       +A + F   ++   +N       GQ+ 
Sbjct: 619 AIESYDKALGFQPNDPYLWHSRGRALAKLERHAEALTCFDRSIDILPENYEPWYDRGQSL 678

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP-- 183
                GRY+ +LE Y R LQ+ P  P  I    G+ +    +   A +++ RAL ++P  
Sbjct: 679 AAL--GRYTTALESYDRTLQLRPKDP-EIWHSYGIVQGLRQEYTAALESYDRALAINPNF 735

Query: 184 -----ENVEALV--------------ALAVMDLQANEAAGIRKGMEKMQR---------- 214
                E   AL               A+A++   A  + G  + + K+QR          
Sbjct: 736 YQSWYERGNALAELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKLQRYAEAIASYDL 795

Query: 215 AFEIYP-----YC---------------------AMALNYLANHFF-FTGQHFLVEQLTE 247
           A    P     +C                     A+ LN  A   + F G+  L  Q   
Sbjct: 796 ALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYA 855

Query: 248 TALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            AL V            HS+ +L  ++   G  E A   Y  +++     H     ++ L
Sbjct: 856 EALTVYERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYHP---AWHNL 912

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G+   +LGD   A   +E+ +  +P + +T   +G++  QLG++ +A     +   + P 
Sbjct: 913 GKELTQLGDTDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPD 972

Query: 364 DAQAFIDLGELL 375
            A+A+   G+ L
Sbjct: 973 RAEAWYRQGKAL 984



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 100/481 (20%), Positives = 174/481 (36%), Gaps = 98/481 (20%)

Query: 35   YERIAILNALGVYYT----YLGKIETKQREKE------------EHFILATQYYNKASRI 78
            Y+R   L ALG Y T    Y   ++ + ++ E            + +  A + Y++A  I
Sbjct: 672  YDRGQSLAALGRYTTALESYDRTLQLRPKDPEIWHSYGIVQGLRQEYTAALESYDRALAI 731

Query: 79   DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
            + +   +W  +G  L   G  E A + +   +       PA  G+    F   RY++++ 
Sbjct: 732  NPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKLQRYAEAIA 791

Query: 139  FYKRALQVHP------------------------SCPGAIRLGI---------GLCRYKL 165
             Y  AL   P                        S   A++L           G    KL
Sbjct: 792  SYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKL 851

Query: 166  GQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
             +  +A   ++RA++L+ E+  +   + L    L  +E A     ++  ++A E+ P   
Sbjct: 852  QRYAEALTVYERAIELNSEDYHSWNDLGLTFAHLGRSEDA-----IDSYRQAIELQPDYH 906

Query: 224  MALNYLANHF-------------------------FFTGQHFLVEQLTETALA------V 252
             A + L                              + G   L+ QL E + A      V
Sbjct: 907  PAWHNLGKELTQLGDTDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQV 966

Query: 253  TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
            TN  P ++ ++Y   ++  +   +E+A   Y       N  ++     Y  GQV  KL  
Sbjct: 967  TNLKPDRAEAWYRQGKALQALQQWERAVTCYERVTTLTNPSYDLC---YSHGQVLTKLNR 1023

Query: 313  FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             + AL  +E  L +  +  +   A G     L + E A     +A  +DP++     +  
Sbjct: 1024 HQEALACYELALTLNKNAADAWYAKGQTLAALNRWEDANSCYERALSLDPQNQSILYN-- 1081

Query: 373  ELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                 S   AA   ++TA     +A E  P   E+    G I  E G + +A  S + A 
Sbjct: 1082 ----QSRVQAAQGDWETALVACCQAIELDPDNPEIWTQHGQISIELGNYNTAVASLQTAT 1137

Query: 431  G 431
            G
Sbjct: 1138 G 1138


>gi|118350024|ref|XP_001008293.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89290060|gb|EAR88048.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 373

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 26/340 (7%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G++ +A    + +      +  A    A V FN     +S     +AL+++P    A   
Sbjct: 9   GQINEAKYCLESIQRLSNQDFEAYYRIAAVYFNMNMIEESKSCLLKALEINPQFENA-HT 67

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV----MDLQANEAAGIRKGMEKM 212
            +G    K+G+  KA++   +AL+++P++V +L+ L      M++Q  +     K ++  
Sbjct: 68  SLGYLYKKIGKPQKAKECILKALEINPKSVFSLLELGYLYEDMNMQDEQKQTYMKILQIE 127

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
            + FE      + L Y   +     +H+         L V    P      YNL      
Sbjct: 128 PKNFE--AQYGLGLYYFKQNMLQEARHWF--------LQVLEINPNFKSVVYNLGIISEK 177

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
            G+YE A  +Y  ++ ++N P +    Y+ LG    K+ +   A   + KV ++ P +  
Sbjct: 178 LGEYENAKQFYQKAI-QLN-PQD-ANTYFNLGVTYEKMKNVEEARKCYLKVQQLEPKSIY 234

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
            L  LG IY  LGQ ++AQ+      KIDP++  A+ +L  + I           + +  
Sbjct: 235 ALNNLGAIYFDLGQFQEAQKCFEDIIKIDPQNFGAYYNLSAIYIKKGN------IEESIQ 288

Query: 393 LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            L+K  +  P  I     +G I + KG+F+ A Q ++ A+
Sbjct: 289 CLQKTIQINPEYINAHKQLGQIFYTKGQFDEAIQCYQQAI 328



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 11/263 (4%)

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
           EQ  +  KI L+ +  N  A  G     F +    ++  ++ + L+++P+    +   +G
Sbjct: 115 EQKQTYMKI-LQIEPKNFEAQYGLGLYYFKQNMLQEARHWFLQVLEINPNFKSVVY-NLG 172

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
           +   KLG+   A+Q +Q+A+QL+P++      L V   +       RK   K+Q   ++ 
Sbjct: 173 IISEKLGEYENAKQFYQKAIQLNPQDANTYFNLGVTYEKMKNVEEARKCYLKVQ---QLE 229

Query: 220 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           P    ALN L   +F  GQ    ++  E  + +    P    +YYNL+  Y  KG+ E++
Sbjct: 230 PKSIYALNNLGAIYFDLGQFQEAQKCFEDIIKID---PQNFGAYYNLSAIYIKKGNIEES 286

Query: 280 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
            +  +    +IN   E+I  +  LGQ+    G F  A+  +++ ++I   + ++   + +
Sbjct: 287 -IQCLQKTIQINP--EYINAHKQLGQIFYTKGQFDEAIQCYQQAIKINSQDSDSYFMIAN 343

Query: 340 IYVQLGQIEKAQELLRKAAKIDP 362
            Y  +G  ++A+    K  +I+P
Sbjct: 344 TYNLMGNQKEAKFYQEKGEQINP 366



 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 29/188 (15%)

Query: 5   YFKQGKVEQ----FRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 60
           YFKQ  +++    F Q+LE      I+  +  V Y        LG+    LG+ E     
Sbjct: 141 YFKQNMLQEARHWFLQVLE------INPNFKSVVYN-------LGIISEKLGEYEN---- 183

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
                  A Q+Y KA +++  + +T+   G        VE+A   +  V + +  ++ AL
Sbjct: 184 -------AKQFYQKAIQLNPQDANTYFNLGVTYEKMKNVEEARKCYLKVQQLEPKSIYAL 236

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
                + F+ G++ ++ + ++  +++ P   GA    +     K G + ++ Q  Q+ +Q
Sbjct: 237 NNLGAIYFDLGQFQEAQKCFEDIIKIDPQNFGA-YYNLSAIYIKKGNIEESIQCLQKTIQ 295

Query: 181 LDPENVEA 188
           ++PE + A
Sbjct: 296 INPEYINA 303



 Score = 40.0 bits (92), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 29/243 (11%)

Query: 511 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET 570
           QD+ +AY R+AA+    N ++ S   + +AL++N ++ NA + LG L  K     KAKE 
Sbjct: 27  QDF-EAYYRIAAVYFNMNMIEESKSCLLKALEINPQFENAHTSLGYLYKKIGKPQKAKEC 85

Query: 571 FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNL 630
              A +  + K  ++ L LG       +++E+             K+ Y +++     N 
Sbjct: 86  ILKALE-INPKSVFSLLELGYLYEDMNMQDEQ-------------KQTYMKILQIEPKNF 131

Query: 631 YAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 690
            A  G G+   ++     ++  F QV E            V  NL  +    G +  A +
Sbjct: 132 EAQYGLGLYYFKQNMLQEARHWFLQVLEINPN-----FKSVVYNLGIISEKLGEYENAKQ 186

Query: 691 MYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAP-SNYTLR------F 743
            YQ  ++      DA     L  T+ + +  ++ +K  L+   L P S Y L       F
Sbjct: 187 FYQKAIQ--LNPQDANTYFNLGVTYEKMKNVEEARKCYLKVQQLEPKSIYALNNLGAIYF 244

Query: 744 DAG 746
           D G
Sbjct: 245 DLG 247


>gi|410730423|ref|XP_003671391.2| hypothetical protein NDAI_0G03710 [Naumovozyma dairenensis CBS 421]
 gi|401780209|emb|CCD26148.2| hypothetical protein NDAI_0G03710 [Naumovozyma dairenensis CBS 421]
          Length = 1121

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 195/860 (22%), Positives = 346/860 (40%), Gaps = 152/860 (17%)

Query: 116  NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
            N   LL +A + F +  +  SL+ ++  L  +P      R+GIG C ++L     A  A+
Sbjct: 196  NCMFLLLRAKLLFRKKNFMASLKLFQELLVNNPVLKPDPRIGIGACFWQLKDYKMAINAW 255

Query: 176  QRALQLDP--ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
            +R+L+LDP  +N + L  L        ++    +  +  + A           N   N  
Sbjct: 256  ERSLELDPTNKNSKVLCLLGKFHKTLIDSGNDDEFKDNFKDAMIDLSNIYQTENGKENPV 315

Query: 234  FFT--------------GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
              T                +   E++   +  VT+   ++S  +    R+Y++  DY +A
Sbjct: 316  LLTLLQSYYYYKGDYKKILNIYEERIKPISSIVTDTILSESTLW--CGRAYYALNDYRQA 373

Query: 280  GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
               +  S+K   K  + +    GLGQ Q+K      ++  FE + +   +  E    LG 
Sbjct: 374  FAMFQESLK---KNEDNLLSKLGLGQTQIKTNLLEESVLTFENIYKTNENIQELNYILGL 430

Query: 340  IYV------------QLGQIEK--------------AQELLRKAAK-IDPRDAQAFIDLG 372
            +Y             Q    EK              A + L K  K  + +  Q  I   
Sbjct: 431  LYAGKCLDKKDSRNNQKNDTEKKNASNKELSIMNSKAIKYLEKYIKSTNSKRNQLVIPRA 490

Query: 373  ELLISSDTGAALDAFKTARTLLKKAGEEV-----------PIEVLNNIGVIHFEKGEFES 421
              +IS     + + +K +   L KA EEV           PIE+LNN+G  ++  G+   
Sbjct: 491  YFVISQ-LYESTNQYKQSLEYLIKALEEVKFVKNGRIDDVPIELLNNLGSFYYMNGDM-- 547

Query: 422  AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 481
                                KTK Y       + + K         +  N   L    +T
Sbjct: 548  -------------------IKTKEYF-----QLAKEKLTSGSSLSSSTENESTL----IT 579

Query: 482  VLFNLARLLE-QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
            V +N+AR LE +  +   A  LY  IL K+ +Y+ A +R     K  N+++    + NE 
Sbjct: 580  VNYNIARSLESEPENITKAQELYEDILSKHPNYISAKIR-NLFYKYLNHVEDPKMIENEM 638

Query: 541  LKVNGKYPNAL---SMLGDLELKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWN 593
              +N    + L   S       KN    K +E   + +  T    D  D YA +SLGN  
Sbjct: 639  ESLNDNNESNLEIRSFYSWFLKKNTTTQKREEKQTSYNKDTLVKYDSHDLYALISLGNLY 698

Query: 594  YFA---ALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 650
                    +N K   K + ++L K+ +L+ +V+     N++AA G  ++ AE  +   + 
Sbjct: 699  CIIGRECRKNVKEQEKSKHSYL-KSIQLFQKVLQIDPMNVFAAQGIAIIFAESKRLGPAL 757

Query: 651  DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILL 709
            ++  +V+++      +   DV INLA+       F  A++ Y   L+KF   +  + IL 
Sbjct: 758  EILRKVRDS------IDNEDVHINLANCLLEMREFNKAIENYDLILKKFPKISNKSHILN 811

Query: 710  YLARTHY----EAEQWQDCKKSLLR---AIHLAPSNYT--------LRFDAGVAMQKFS- 753
             LA+T Y    + ++ +   K+L+    AI       T        L+F+  VA+  F  
Sbjct: 812  LLAKTWYSRGLKEKKIEFFFKALVNTEDAIKFENVKETKNERFLSILKFN--VALLNFQI 869

Query: 754  ASTLQKT----RRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD--EKKINTHVEYC 807
            A TL+++    RR  D ++ +V  L++A+ +   L+ + + ++   +  E++I       
Sbjct: 870  AETLRRSNVKERRIKD-LQKSVKGLDDAINILKELNVSKDFNIIPKEELEQRIQLGETTM 928

Query: 808  KHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLL----------- 856
            K++L+   + +E  ER+     Q+ +      L EE   K +EQ                
Sbjct: 929  KNVLERCLMEQEQYERD-----QKNKLLEARKLLEEQELKVKEQLSKEEEEKRLKLEKQT 983

Query: 857  -EKRKLEDEQKRLRQQEEHF 875
             E ++L+DE ++L Q+ E  
Sbjct: 984  EEYKRLQDEAQKLIQERESL 1003


>gi|118354513|ref|XP_001010518.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89292285|gb|EAR90273.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1619

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 168/370 (45%), Gaps = 28/370 (7%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 125
            A QYY +   I+ ++ S +   G    AKG  ++A  +++  LE +  N      LG   
Sbjct: 969  AIQYYLQCLEINPNKDSCYQNLGNAYKAKGLYDEAIKSYQQCLEINPQNYGCYENLG--- 1025

Query: 126  VEFN-RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
            + +N +G   ++++ Y++ L+++P+   +    +G   Y+ G   +A Q++Q+ L+++P+
Sbjct: 1026 IAYNEKGLQDEAIQSYQKCLEINPN-KDSCYNNLGNAYYEKGFQDEAIQSYQKCLEINPK 1084

Query: 185  NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            N      L +     NE     + ++  Q+  EI P      N L N +   G      +
Sbjct: 1085 NEGCYNNLGIA---YNEKGLQDEAIQSYQKYLEINPKNDACYNNLGNAYQAKGLQDEAIK 1141

Query: 245  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
              +  L +    P     Y NL  +Y+ KG  ++A   Y   + E+N   +    YY LG
Sbjct: 1142 QYQKCLEIN---PKNEGCYENLGNAYNQKGLQDEAIQSYQKCL-EMNPNKDSC--YYNLG 1195

Query: 305  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
                  G    A+ +++K LEI   N      LG  Y +LG  ++A +  +K  +I+P +
Sbjct: 1196 NAYKAKGLLDEAIKSYQKCLEINSKNGGCYGNLGIAYNELGLQDEAIQSYQKYLEINPEN 1255

Query: 365  AQAFIDLGELLISSDTGAALD-AFKTARTLLKKAGEEVPIE---VLNNIGVIHFEKGEFE 420
               + +LG    +  T   LD A K+ +  L     E+ ++      N+G+ + EKG  +
Sbjct: 1256 DVCYNNLGN---AYKTKGLLDEAIKSYQKCL-----EINLKNDGCYENLGIAYNEKGLQD 1307

Query: 421  SAHQSFKDAL 430
             A QS++  L
Sbjct: 1308 EAIQSYQKCL 1317



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 168/401 (41%), Gaps = 56/401 (13%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLG--- 122
            A Q Y K  +I     S +   G    AKG +++A  ++++ LE +   D     LG   
Sbjct: 731  AIQSYQKCLKISPKNDSCYNNLGNAYKAKGYLDEAIQSYQLCLEINPKNDCCHENLGITY 790

Query: 123  -------------QACVEFN----------------RGRYSDSLEFYKRALQVHPSCPGA 153
                         Q C+E N                +G   ++++ Y++ L+ +P     
Sbjct: 791  NEKDLHDDAIQSYQKCLEINPNIDSFYYNLGNAYKAKGLLDEAIKSYQKCLETNPK-NNF 849

Query: 154  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 213
                +G+   + G   +A Q++Q+ L+++P N    V    + +  N+     + ++  Q
Sbjct: 850  CYNNLGIAYNEKGLHDEAIQSYQKCLEINPNND---VCYNNLGIAYNQKGLQDEAIQSYQ 906

Query: 214  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
            +  EI P   +  N L N +   G H    Q  +  L +    P     + NL  +Y+ K
Sbjct: 907  KYLEINPKDDVCYNNLGNAYKGKGLHDEAIQSYQKCLEIN---PKNDGCHENLGIAYNEK 963

Query: 274  GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
            G  ++A  YY+  + EIN   +    Y  LG      G +  A+ ++++ LEI P N   
Sbjct: 964  GLQDEAIQYYLQCL-EINPNKDSC--YQNLGNAYKAKGLYDEAIKSYQQCLEINPQNYGC 1020

Query: 334  LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 393
             + LG  Y + G  ++A +  +K  +I+P     + +LG      + G   +A ++ +  
Sbjct: 1021 YENLGIAYNEKGLQDEAIQSYQKCLEINPNKDSCYNNLGNAYY--EKGFQDEAIQSYQKC 1078

Query: 394  L----KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            L    K  G        NN+G+ + EKG  + A QS++  L
Sbjct: 1079 LEINPKNEG------CYNNLGIAYNEKGLQDEAIQSYQKYL 1113



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 172/397 (43%), Gaps = 48/397 (12%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A Q Y K   ++ ++ S +   G    AKG +++A  +++  LE +  N     G   + 
Sbjct: 1173 AIQSYQKCLEMNPNKDSCYYNLGNAYKAKGLLDEAIKSYQKCLEINSKN-GGCYGNLGIA 1231

Query: 128  FNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            +N  G   ++++ Y++ L+++P         +G      G L +A +++Q+ L+++ +N 
Sbjct: 1232 YNELGLQDEAIQSYQKYLEINPE-NDVCYNNLGNAYKTKGLLDEAIKSYQKCLEINLKND 1290

Query: 187  EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
                 L +     NE     + ++  Q+  EI P   +  N L   ++  G      Q  
Sbjct: 1291 GCYENLGIA---YNEKGLQDEAIQSYQKCLEINPKNDICYNNLGIAYYEKGLQDEAIQSY 1347

Query: 247  ETALAVT--NHG-----------------------------PTKSHSYYNLARSYHSKGD 275
            +  L +   N G                             PTK   Y NL  +Y +KG 
Sbjct: 1348 QKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINPTKDSCYNNLGNTYKAKGL 1407

Query: 276  YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
             ++A   Y   + EIN  ++      G+   +  L D   A+ +++K LEI P N    K
Sbjct: 1408 LDEAINSYQKCL-EINPKNDGCHENLGIAYNEKGLLD--EAIKSYQKCLEINPKNDVCYK 1464

Query: 336  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
             LG  Y ++G +++A +  +K  +I+P++   + +LG  +  ++ G   +A ++ +  L 
Sbjct: 1465 NLGIAYYEIGLLDEAIQSYQKCLEINPKNDVCYNNLG--IAYNEKGLQDEAIQSYQKYL- 1521

Query: 396  KAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 430
               E  P      NN+G  ++EKG  + A QS++  L
Sbjct: 1522 ---EMNPKNDVCYNNLGNAYYEKGLHDEAIQSYQKCL 1555



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 169/367 (46%), Gaps = 22/367 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 125
           A Q Y K  +I+ ++ S +   G   LAKG  ++A  +++  LE +  N      LG   
Sbjct: 595 AIQSYQKFIKINPNKDSCYQNLGNAYLAKGLQDEAIQSYQQCLEINPQNYGCYENLG--- 651

Query: 126 VEFN-RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           + +N +G   ++++ Y++ L+++P+   +    +G      G L +A Q++Q+ L+++P+
Sbjct: 652 IAYNEKGLQDEAIQSYQKYLEINPN-KDSCYQNLGNAYKAKGLLNEAIQSYQQCLKINPK 710

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
           N      L +      E   + + ++  Q+  +I P      N L N +   G  +L E 
Sbjct: 711 NDGCHENLGIAQY---EKGLLDEAIQSYQKCLKISPKNDSCYNNLGNAYKAKG--YLDEA 765

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
           +    L +    P     + NL  +Y+ K  ++ A   Y   + EIN P+   F YY LG
Sbjct: 766 IQSYQLCLE-INPKNDCCHENLGITYNEKDLHDDAIQSYQKCL-EIN-PNIDSF-YYNLG 821

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
                 G    A+ +++K LE  P N      LG  Y + G  ++A +  +K  +I+P +
Sbjct: 822 NAYKAKGLLDEAIKSYQKCLETNPKNNFCYNNLGIAYNEKGLHDEAIQSYQKCLEINPNN 881

Query: 365 AQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAH 423
              + +LG  +  +  G   +A ++ +  L+    ++V     NN+G  +  KG  + A 
Sbjct: 882 DVCYNNLG--IAYNQKGLQDEAIQSYQKYLEINPKDDV---CYNNLGNAYKGKGLHDEAI 936

Query: 424 QSFKDAL 430
           QS++  L
Sbjct: 937 QSYQKCL 943



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 141/643 (21%), Positives = 259/643 (40%), Gaps = 70/643 (10%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 125
            A Q Y K   I+  +   +   G     KG  ++A  +++  LE +   D     LG   
Sbjct: 901  AIQSYQKYLEINPKDDVCYNNLGNAYKGKGLHDEAIQSYQKCLEINPKNDGCHENLG--- 957

Query: 126  VEFN-RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
            + +N +G   +++++Y + L+++P+   +    +G      G   +A +++Q+ L+++P+
Sbjct: 958  IAYNEKGLQDEAIQYYLQCLEINPN-KDSCYQNLGNAYKAKGLYDEAIKSYQQCLEINPQ 1016

Query: 185  NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            N      L +     NE     + ++  Q+  EI P      N L N ++  G      Q
Sbjct: 1017 NYGCYENLGIA---YNEKGLQDEAIQSYQKCLEINPNKDSCYNNLGNAYYEKGFQDEAIQ 1073

Query: 245  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
              +  L +    P     Y NL  +Y+ KG  ++A   Y   + EIN  ++    Y  LG
Sbjct: 1074 SYQKCLEIN---PKNEGCYNNLGIAYNEKGLQDEAIQSYQKYL-EINPKNDAC--YNNLG 1127

Query: 305  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
                  G    A+  ++K LEI P N    + LG+ Y Q G  ++A +  +K  +++P  
Sbjct: 1128 NAYQAKGLQDEAIKQYQKCLEINPKNEGCYENLGNAYNQKGLQDEAIQSYQKCLEMNPNK 1187

Query: 365  AQAFIDLGELLISSDTGAALDAFKTARTLL----KKAGEEVPIEVLNNIGVIHFEKGEFE 420
               + +LG    +   G   +A K+ +  L    K  G         N+G+ + E G  +
Sbjct: 1188 DSCYYNLGNAYKAK--GLLDEAIKSYQKCLEINSKNGG------CYGNLGIAYNELGLQD 1239

Query: 421  SAHQSFKDAL-----GDGIWLTLLDS-KTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 474
             A QS++  L      D  +  L ++ KTK  + +A  S  +  ++ L    +NDG    
Sbjct: 1240 EAIQSYQKYLEINPENDVCYNNLGNAYKTKGLLDEAIKSYQKCLEINL----KNDG---- 1291

Query: 475  LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
              +  + + +N   L     D    S    L +    D     L +A   K   +   +I
Sbjct: 1292 -CYENLGIAYNEKGL----QDEAIQSYQKCLEINPKNDICYNNLGIAYYEKGLQDE--AI 1344

Query: 535  ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY 594
            +   + L++N K     + LG +  +     +A +++    +    KDS           
Sbjct: 1345 QSYQKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINPTKDSC---------- 1394

Query: 595  FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 654
            +  L N  +A  L    L++A   Y + +  +  N       G+   EKG  D +   + 
Sbjct: 1395 YNNLGNTYKAKGL----LDEAINSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQ 1450

Query: 655  QVQEAASGSVFVQMPDV-WINLAHVYFAQGNFALAMKMYQNCL 696
            +  E    +      DV + NL   Y+  G    A++ YQ CL
Sbjct: 1451 KCLEINPKN------DVCYKNLGIAYYEIGLLDEAIQSYQKCL 1487



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 134/306 (43%), Gaps = 10/306 (3%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A Q Y K   I+      +   G     KG  ++A  +++  LE +  N         V 
Sbjct: 1309 AIQSYQKCLEINPKNDICYNNLGIAYYEKGLQDEAIQSYQKCLEINPKNEGCYNNLGIVY 1368

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              +G   ++++ Y++ L+++P+   +    +G      G L +A  ++Q+ L+++P+N  
Sbjct: 1369 NEKGLQDEAIQSYEKCLEINPT-KDSCYNNLGNTYKAKGLLDEAINSYQKCLEINPKNDG 1427

Query: 188  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                L +     NE   + + ++  Q+  EI P   +    L   ++  G   L+++  +
Sbjct: 1428 CHENLGIA---YNEKGLLDEAIKSYQKCLEINPKNDVCYKNLGIAYYEIG---LLDEAIQ 1481

Query: 248  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            +        P     Y NL  +Y+ KG  ++A   Y   + E+N  ++    Y  LG   
Sbjct: 1482 SYQKCLEINPKNDVCYNNLGIAYNEKGLQDEAIQSYQKYL-EMNPKNDVC--YNNLGNAY 1538

Query: 308  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             + G    A+ +++K LEI P N   L+ LG  Y   G ++ A +  +K  +I+P     
Sbjct: 1539 YEKGLHDEAIQSYQKCLEINPKNDGCLENLGVAYKAKGLLDAAIKSYQKCLEINPDKDSC 1598

Query: 368  FIDLGE 373
            + +LG+
Sbjct: 1599 YYNLGK 1604



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 125/627 (19%), Positives = 246/627 (39%), Gaps = 100/627 (15%)

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
           +S++++ Y++ L+++P    A    +G+   + G   +A Q++Q+ L+++ +N      L
Sbjct: 354 FSEAIQSYQKCLEINPK-NDACHENLGITYNEKGLQDEAIQSYQKCLEINSKNGGCYGNL 412

Query: 193 AVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
            +    A    G++ + ++  Q+  EI P      N L N +   G   L+++  ++   
Sbjct: 413 GI----AYNQKGLQDEAIQSYQKCLEINPKNDDCYNNLGNSYKIKG---LLDKAIKSYRK 465

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
                P     + NL  +Y+ K D +   +       EIN   +    YY LG      G
Sbjct: 466 CLKINPKNDICHENLGIAYNEK-DLQDEAIQSYQKCLEINPNKDSC--YYNLGNAYKAEG 522

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
               A+ +++K L+I P N      LG  Y + G +++A +  +K  +I+P++   + +L
Sbjct: 523 LLDEAIQSYQKCLKINPKNNFCYNNLGIAYNEKGLLDEAIQSYQKCLEINPQNYVCYNNL 582

Query: 372 GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL- 430
           G  +  +  G   +A ++ +  +K    +       N+G  +  KG  + A QS++  L 
Sbjct: 583 G--IAYNQKGLQDEAIQSYQKFIKINPNKD--SCYQNLGNAYLAKGLQDEAIQSYQQCLE 638

Query: 431 ----GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 486
                 G +  L         I  +   LQ + +Q + ++      +E+  NK +     
Sbjct: 639 INPQNYGCYENL--------GIAYNEKGLQDEAIQSYQKY------LEINPNKDSC---- 680

Query: 487 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 546
                                  YQ+  +AY       KA+  L  +I+   + LK+N K
Sbjct: 681 -----------------------YQNLGNAY-------KAKGLLNEAIQSYQQCLKINPK 710

Query: 547 YPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 606
                  LG  + +     +A ++++     +   DS           +  L N  +A  
Sbjct: 711 NDGCHENLGIAQYEKGLLDEAIQSYQKCLKISPKNDS----------CYNNLGNAYKA-- 758

Query: 607 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 666
               +L++A + Y   +  +  N       G+   EK   D+  D     Q+     +  
Sbjct: 759 --KGYLDEAIQSYQLCLEINPKNDCCHENLGITYNEK---DLHDDAIQSYQKCL--EINP 811

Query: 667 QMPDVWINLAHVYFAQGNFALAMKMYQNCL-----RKFYYNTDAQILLYLARTHYEAEQW 721
            +   + NL + Y A+G    A+K YQ CL       F YN        L   + E    
Sbjct: 812 NIDSFYYNLGNAYKAKGLLDEAIKSYQKCLETNPKNNFCYNN-------LGIAYNEKGLH 864

Query: 722 QDCKKSLLRAIHLAPSNYTLRFDAGVA 748
            +  +S  + + + P+N     + G+A
Sbjct: 865 DEAIQSYQKCLEINPNNDVCYNNLGIA 891



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 166/397 (41%), Gaps = 48/397 (12%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 125
           A Q Y K   I+ ++ S +   G    A+G +++A  +++  L+ +  N      LG   
Sbjct: 493 AIQSYQKCLEINPNKDSCYYNLGNAYKAEGLLDEAIQSYQKCLKINPKNNFCYNNLG--- 549

Query: 126 VEFN-RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           + +N +G   ++++ Y++ L+++P         +G+   + G   +A Q++Q+ ++++P 
Sbjct: 550 IAYNEKGLLDEAIQSYQKCLEINPQ-NYVCYNNLGIAYNQKGLQDEAIQSYQKFIKINPN 608

Query: 185 NVEALVALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
                  L    L    A G++ + ++  Q+  EI P        L   +   G      
Sbjct: 609 KDSCYQNLGNAYL----AKGLQDEAIQSYQQCLEINPQNYGCYENLGIAYNEKGLQDEAI 664

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           Q  +  L +    P K   Y NL  +Y +KG   +A   Y   +K IN  ++       L
Sbjct: 665 QSYQKYLEIN---PNKDSCYQNLGNAYKAKGLLNEAIQSYQQCLK-INPKNDGCHE--NL 718

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G  Q + G    A+ +++K L+I P N      LG+ Y   G +++A +  +   +I+P+
Sbjct: 719 GIAQYEKGLLDEAIQSYQKCLKISPKNDSCYNNLGNAYKAKGYLDEAIQSYQLCLEINPK 778

Query: 364 DAQAFIDLGELLISSD--------------TGAALDAF-------KTARTLL-------K 395
           +     +LG      D                  +D+F         A+ LL       +
Sbjct: 779 NDCCHENLGITYNEKDLHDDAIQSYQKCLEINPNIDSFYYNLGNAYKAKGLLDEAIKSYQ 838

Query: 396 KAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 430
           K  E  P      NN+G+ + EKG  + A QS++  L
Sbjct: 839 KCLETNPKNNFCYNNLGIAYNEKGLHDEAIQSYQKCL 875



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 50/277 (18%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 125
            A Q Y K   I+  + S +   G    AKG +++A ++++  LE +   D     LG   
Sbjct: 1377 AIQSYEKCLEINPTKDSCYNNLGNTYKAKGLLDEAINSYQKCLEINPKNDGCHENLG--- 1433

Query: 126  VEFN-RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
            + +N +G   ++++ Y++ L+++P         +G+  Y++G L +A Q++Q+ L+++P+
Sbjct: 1434 IAYNEKGLLDEAIKSYQKCLEINPK-NDVCYKNLGIAYYEIGLLDEAIQSYQKCLEINPK 1492

Query: 185  NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            N    V    + +  NE     + ++  Q+  E+ P   +  N L N ++  G H    Q
Sbjct: 1493 ND---VCYNNLGIAYNEKGLQDEAIQSYQKYLEMNPKNDVCYNNLGNAYYEKGLHDEAIQ 1549

Query: 245  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
              +  L +    P       NL  +Y +KG                              
Sbjct: 1550 SYQKCLEIN---PKNDGCLENLGVAYKAKGL----------------------------- 1577

Query: 305  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
                      +A+ +++K LEI PD       LG  Y
Sbjct: 1578 --------LDAAIKSYQKCLEINPDKDSCYYNLGKAY 1606



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           ++ LGQ+Q +L  F  A+ +++K LEI P N    + LG  Y + G  ++A +  +K  +
Sbjct: 341 WFELGQIQHELKYFSEAIQSYQKCLEINPKNDACHENLGITYNEKGLQDEAIQSYQKCLE 400

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
           I+ ++   + +LG  +  +  G   +A ++ +  L+   +    +  NN+G  +  KG  
Sbjct: 401 INSKNGGCYGNLG--IAYNQKGLQDEAIQSYQKCLEINPKND--DCYNNLGNSYKIKGLL 456

Query: 420 ESAHQSFKDAL 430
           + A +S++  L
Sbjct: 457 DKAIKSYRKCL 467


>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
 gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2342

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 160/705 (22%), Positives = 291/705 (41%), Gaps = 110/705 (15%)

Query: 79  DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           ++++  T   +G     K  +++A   F  V+E D +N  A     C    +    DSLE
Sbjct: 5   NINDIETLYKQGLEFEGKKMIDEAIECFNKVIEIDSNNAEAYYSLGCCFELKNLVDDSLE 64

Query: 139 FYKRALQVHPSCPGAI--RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
            + + L ++P+   A   +  I L   K   + +A  + ++A+++DP  V+A   LA   
Sbjct: 65  SFNKVLSINPNYLKAYASKADIHL---KKSNIDEAIISLKQAIEIDPNFVQAYQKLAQAY 121

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
            + N+   I +  +K+    EI P    A + LA  +   GQ   +++       +    
Sbjct: 122 KKQNKLDQITECYKKI---IEIEPKNMEAFHELALTYEIKGQ---IDEAYAWYKKILTID 175

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN----KPHEFIFPYYGLGQVQLKLGD 312
           P    +Y +LAR+Y      E+A +  + +  EI+    + HE       LG +  K   
Sbjct: 176 PQFIKAYISLARNYFCDSMTEEA-IRMLKTALEIDPNSAEAHE------RLGFIYEKQSM 228

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYV--QLGQIEKAQELLRKAAKIDPRDAQAFID 370
           F SAL +++  LE  P+      +L +IY   QL Q  +A + LRKA +IDP   QA+  
Sbjct: 229 FDSALISYKIALEKNPNFLSVYISLAYIYFLKQLDQ--EAIKQLRKAIEIDPNFVQAYER 286

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKD 428
           LG   +  +     +A K      KKA E  P       N+G++++ +G++  +   +K 
Sbjct: 287 LG--FVFQNRKKYEEAIKN----YKKAIELDPKYFNAQYNLGLLYYYQGKYNDSLLCYKK 340

Query: 429 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 488
           A+        LD K     +DA      + ++ L + F  D N+  + + +  +  N   
Sbjct: 341 AIE-------LDPK----YVDA------YNNLGLVY-FGLDMNNEAIQYYQKALELN--- 379

Query: 489 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 548
                                  DY  A+       +  N ++ +IE   +A+K+N K+ 
Sbjct: 380 ----------------------PDYYKAHYNSGLAYEKDNLIEEAIESYKKAIKINPKFL 417

Query: 549 NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLG------------------ 590
            AL  LGD+ ++ +   +  E F+     +   + Y   SLG                  
Sbjct: 418 KALIRLGDICVEREMIDEGIECFKKIVQLSPNSE-YDFFSLGELYLTKKIYEEAIKCYKK 476

Query: 591 ----NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 646
               N  Y  AL N   A + +    ++A E Y + I    +   A    G+  A K   
Sbjct: 477 TLEINPQYIKALNNLGLAYEYQQM-FDQAIECYKKAIEIDPNYHLAYYNCGISYASKKMV 535

Query: 647 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA- 705
           D + + + +V E     +  Q  +   N+ ++Y  Q  +  A++ YQ+ L+    N ++ 
Sbjct: 536 DEAIECYKKVLE-----INPQYLNASTNMGYLYSQQKMYDKAIECYQSALQ---VNENSL 587

Query: 706 QILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 750
           +IL  L   +Y++       +   R I + P ++   ++ GVA Q
Sbjct: 588 KILNNLGYAYYKSNMHDQAIEIYKRVIQIDPKSFLANYNIGVAYQ 632



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 141/617 (22%), Positives = 247/617 (40%), Gaps = 88/617 (14%)

Query: 69  TQYYNKASRIDMHEPSTWVGKGQLLLA---KGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           T+ Y K   I   EP       +L L    KG++++A + +K +L  D   + A +  A 
Sbjct: 131 TECYKKIIEI---EPKNMEAFHELALTYEIKGQIDEAYAWYKKILTIDPQFIKAYISLAR 187

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
             F      +++   K AL++ P+   A    +G    K      A  +++ AL+ +P  
Sbjct: 188 NYFCDSMTEEAIRMLKTALEIDPNSAEA-HERLGFIYEKQSMFDSALISYKIALEKNPNF 246

Query: 186 VEALVALAVMDL--QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           +   ++LA +    Q ++ A     ++++++A EI P    A   L   F F  +    E
Sbjct: 247 LSVYISLAYIYFLKQLDQEA-----IKQLRKAIEIDPNFVQAYERLG--FVFQNRKKYEE 299

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            +     A+    P   ++ YNL   Y+ +G Y  + L Y    K I    +++  Y  L
Sbjct: 300 AIKNYKKAIE-LDPKYFNAQYNLGLLYYYQGKYNDSLLCYK---KAIELDPKYVDAYNNL 355

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G V   L     A+  ++K LE+ PD  +     G  Y +   IE+A E  +KA KI+P+
Sbjct: 356 GLVYFGLDMNNEAIQYYQKALELNPDYYKAHYNSGLAYEKDNLIEEAIESYKKAIKINPK 415

Query: 364 DAQAFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
             +A I LG++ +  +     ++ FK    L   +  +       ++G ++  K  +E A
Sbjct: 416 FLKALIRLGDICVEREMIDEGIECFKKIVQLSPNSEYD-----FFSLGELYLTKKIYEEA 470

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
            + +K                KT  I+           Q      N G            
Sbjct: 471 IKCYK----------------KTLEINP----------QYIKALNNLG------------ 492

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
              LA   +Q+ D   A   Y+  +    +Y  AY        ++  +  +IE   + L+
Sbjct: 493 ---LAYEYQQMFDQ--AIECYKKAIEIDPNYHLAYYNCGISYASKKMVDEAIECYKKVLE 547

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 602
           +N +Y NA + +G L  +   + KA E +++A                N N    L N  
Sbjct: 548 INPQYLNASTNMGYLYSQQKMYDKAIECYQSALQV-------------NENSLKILNNLG 594

Query: 603 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 662
            A      H ++A E+Y RVI     +  A    GV    K  FD + + + +V+E    
Sbjct: 595 YAYYKSNMH-DQAIEIYKRVIQIDPKSFLANYNIGVAYQMKNMFDEAIEFYKKVEE---- 649

Query: 663 SVFVQMPDVWINLAHVY 679
            +F +   V+I L +VY
Sbjct: 650 -IFPKYFTVFIRLGNVY 665



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 175/409 (42%), Gaps = 63/409 (15%)

Query: 65   FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LG 122
            F L+ + Y KA  ++           ++ L +  V +A      +LE + +N      LG
Sbjct: 942  FDLSIENYQKAFELNPKFTDAIKKIMRIYLDRKMVSEAKEFHNKMLEENPNNAEIFYQLG 1001

Query: 123  QACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRY-KLGQLGKARQAFQRALQ 180
            +A  E +  +Y D++  YK+ +Q+ P      I LG   C Y    +  +A + F + ++
Sbjct: 1002 EAYQE-DSSKYEDAIACYKKVIQIDPKHIDSHIELG---CIYLDKKEYQQAIEYFNKVIE 1057

Query: 181  LDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
            LDP+ V AL  + LA  D + NE     K +E   +A EI P    ++       + TG 
Sbjct: 1058 LDPKEVVALNNIGLAYYDQKMNE-----KALEYYNKALEINPTFQQSI-------YNTGL 1105

Query: 239  HFLVEQLTETALAVTNH----GPTKSHSYYNL---------------------------- 266
             + ++   E AL   N      PT+  S   +                            
Sbjct: 1106 VYEIQNQYEKALEYYNKVLKINPTEKKSLLRVEKINEKIGNINSEKPEETSKKEVQNTLS 1165

Query: 267  -ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY----GLGQVQLKLGDFRSALTNFE 321
             A+ Y+SKG    A +    S++ + K  E    YY     LG +  + G F  A+ N+ 
Sbjct: 1166 SAKEYYSKGYDFYAQMEDEKSIQCLQKAIEIDPNYYEAYDKLGLIYGEKGMFDEAIQNYL 1225

Query: 322  KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
            K LEI P   + + ++ +IY    +IE+A+E  +K   ++P   +   +LGE  +  D  
Sbjct: 1226 KALEINPKFFDIIPSIMNIYFDQNRIEEAKEFHQKIVDLNPNCTETLYELGE--VYQDQN 1283

Query: 382  AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +AF+  + +LK   + +   +   +G I+ +K + + A + +K AL
Sbjct: 1284 MIDEAFECYQKILKIDPQYIDAHI--ELGNIYLDKHDNDQALECYKRAL 1330



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 163/384 (42%), Gaps = 26/384 (6%)

Query: 51   LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
            LG +   Q+  +E    A   Y KA  ++    S ++  G   L K   ++A   +K VL
Sbjct: 1544 LGTVYQDQKMVDE----AIACYQKAIELNPQSTSAYIELGNSYLGKVMYDKALECYKKVL 1599

Query: 111  EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
            E D     A      V +N+     +LE+Y +AL+V+P    +I    GL   +  Q  K
Sbjct: 1600 EIDPKKAVAYNNIGLVHYNQNMDDLALEYYNKALEVNPKYELSIY-NSGLIYEQKNQNDK 1658

Query: 171  ARQAFQRALQLDPENVEALVAL-AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
            A + +++ L ++P + + L  +  + +   N     +   EK+Q+     P    A ++L
Sbjct: 1659 ALECYKKVLAINPTDKKTLTRIEKINEKNVNLKLSEKDLEEKLQKV----P--VTAKDHL 1712

Query: 230  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
               F +      VEQ  E         P    +Y  L   Y  K  +E A   Y  +++ 
Sbjct: 1713 EQAFLYLTIK-KVEQSIELLKKAIEIDPNYYDAYDKLGLIYKQKEMFEDAIQNYEKAIEI 1771

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
             +K  E I   Y L  + L L     A    +K+LE   D  ET   LG  Y     + +
Sbjct: 1772 NSKGFESI---YNLMVIYLDLIKINEAAQFHQKILEKNKDCSETNYRLGLAYQDKNMLNE 1828

Query: 350  AQELLRKAAKIDPRDAQAFIDLGEL---LISSDTGAALDAFKTARTLLKKAGEEVPIEVL 406
            A  L  KA ++D +   A++ LG +   LI  D   AL+ F+    +  K      +   
Sbjct: 1829 AIVLFSKAIELDSKHVNAYVKLGNVYLKLIMYDK--ALEVFQKILEIDTKQ-----VVAY 1881

Query: 407  NNIGVIHFEKGEFESAHQSFKDAL 430
            NNIG++++ + + + A + ++ AL
Sbjct: 1882 NNIGLVYYNQKKDDLALEYYQKAL 1905



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 169/387 (43%), Gaps = 35/387 (9%)

Query: 51   LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
            LG++   Q   +E F    + Y K  +ID       +  G + L K + +QA   +K  L
Sbjct: 1275 LGEVYQDQNMIDEAF----ECYQKILKIDPQYIDAHIELGNIYLDKHDNDQALECYKRAL 1330

Query: 111  EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
            E +   + A      V +N      +LE+YK+AL++ P+   +I    GL   +  Q  +
Sbjct: 1331 EINPKEIVAYNNIGLVYYNLKNSDQALEYYKKALEIDPNYELSIY-NSGLAYEQKNQNEE 1389

Query: 171  ARQAFQRALQLDPENVEALVAL-AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
            A + + +  Q++P   ++L+ +  +  L  N  + I++ +E   +               
Sbjct: 1390 ALKYYNKVQQINPNEKKSLLRIQKINSLNENFDSKIQQSIENNPQT-------------- 1435

Query: 230  ANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
            A  ++  G  + V+   + ++          P    +Y  L   Y  K  YE+A  Y+  
Sbjct: 1436 AKDYYKQGFLYYVQMQDDKSIECLKKSVELDPLYFEAYDKLGFVYQQKKMYEEALEYFKE 1495

Query: 286  SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
            ++K IN P  F      + ++ L+      A    + + E+ PD  +T + LG +Y    
Sbjct: 1496 AIK-IN-PKCF-NSISSIMRIYLEQKKIDEAKEYHKMINEMNPDCAQTQQELGTVYQDQK 1552

Query: 346  QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 405
             +++A    +KA +++P+   A+I+LG    +S  G  +  +  A    KK  E  P + 
Sbjct: 1553 MVDEAIACYQKAIELNPQSTSAYIELG----NSYLGKVM--YDKALECYKKVLEIDPKKA 1606

Query: 406  L--NNIGVIHFEKGEFESAHQSFKDAL 430
            +  NNIG++H+ +   + A + +  AL
Sbjct: 1607 VAYNNIGLVHYNQNMDDLALEYYNKAL 1633



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 59/328 (17%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            ++KA  +D    + +V  G + L     ++A   F+ +LE D   V A      V +N+ 
Sbjct: 1833 FSKAIELDSKHVNAYVKLGNVYLKLIMYDKALEVFQKILEIDTKQVVAYNNIGLVYYNQK 1892

Query: 132  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            +   +LE+Y++AL+++P    ++    GL      Q  KA + +Q+AL ++P + + L  
Sbjct: 1893 KDDLALEYYQKALEINPKYLLSLY-NSGLVYETKNQNDKALECYQKALDINPNDKQTLDR 1951

Query: 192  LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQLTETA 249
            +  + L+     GI K                           F   +FL  +E+ T++A
Sbjct: 1952 MMKLFLKT----GIIKDE-------------------------FDVDNFLQKMEKNTQSA 1982

Query: 250  LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE----FIFPYYGLGQ 305
                       + +Y    +++SK   ++       S+K +NK  E    F   Y  LG 
Sbjct: 1983 -----------YDFYKQGYTFYSKKMKDQ-------SIKCLNKAIEIDPNFFEAYDKLGL 2024

Query: 306  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
            +  + G    A+ N++KV+EI P        LG+IY+   Q+ ++    +K  +IDP   
Sbjct: 2025 IYEEKGMLDQAIENYKKVIEINPKFINAYNKLGNIYLDKKQLNESISYYQKCTEIDPNYL 2084

Query: 366  QAFIDLGELLISSDTG---AALDAFKTA 390
              F +LG  L   D G    AL ++K A
Sbjct: 2085 YGFYNLG--LAYEDKGFDRKALLSYKKA 2110



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 115/518 (22%), Positives = 228/518 (44%), Gaps = 52/518 (10%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA----LLGQ 123
            A +YYNK  +I+ +E  +       LL   ++   +  F   ++   +N P        Q
Sbjct: 1390 ALKYYNKVQQINPNEKKS-------LLRIQKINSLNENFDSKIQQSIENNPQTAKDYYKQ 1442

Query: 124  ACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLD 182
              + + + +   S+E  K+++++ P    A  +LG    + K+ +  +A + F+ A++++
Sbjct: 1443 GFLYYVQMQDDKSIECLKKSVELDPLYFEAYDKLGFVYQQKKMYE--EALEYFKEAIKIN 1500

Query: 183  PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
            P+   ++ ++  + L   E   I +  E  +   E+ P CA     L       G  +  
Sbjct: 1501 PKCFNSISSIMRIYL---EQKKIDEAKEYHKMINEMNPDCAQTQQEL-------GTVYQD 1550

Query: 243  EQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
            +++ + A+A         P  + +Y  L  SY  K  Y+KA   Y   V EI+      +
Sbjct: 1551 QKMVDEAIACYQKAIELNPQSTSAYIELGNSYLGKVMYDKALECY-KKVLEIDPKKAVAY 1609

Query: 299  PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
               GL      + D   AL  + K LE+ P    ++   G IY Q  Q +KA E  +K  
Sbjct: 1610 NNIGLVHYNQNMDDL--ALEYYNKALEVNPKYELSIYNSGLIYEQKNQNDKALECYKKVL 1667

Query: 359  KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI--GVIHFEK 416
             I+P D +    + ++   ++    L   K +   L++  ++VP+   +++    ++   
Sbjct: 1668 AINPTDKKTLTRIEKI---NEKNVNL---KLSEKDLEEKLQKVPVTAKDHLEQAFLYLTI 1721

Query: 417  GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD-MQLFHR-FENDGNHVE 474
             + E + +  K A+   I     D+  K  +I     M  F+D +Q + +  E +    E
Sbjct: 1722 KKVEQSIELLKKAIE--IDPNYYDAYDKLGLIYKQKEM--FEDAIQNYEKAIEINSKGFE 1777

Query: 475  LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
              +N + +  +L ++ E       A+  ++ IL K +D  +   RL    + +N L  +I
Sbjct: 1778 SIYNLMVIYLDLIKINE-------AAQFHQKILEKNKDCSETNYRLGLAYQDKNMLNEAI 1830

Query: 535  ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
             L ++A++++ K+ NA   LG++ LK   + KA E F+
Sbjct: 1831 VLFSKAIELDSKHVNAYVKLGNVYLKLIMYDKALEVFQ 1868



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 96/434 (22%), Positives = 168/434 (38%), Gaps = 84/434 (19%)

Query: 67   LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL---------------- 110
            LA +YYNKA  ++     +    G +   K + ++A   +K VL                
Sbjct: 1624 LALEYYNKALEVNPKYELSIYNSGLIYEQKNQNDKALECYKKVLAINPTDKKTLTRIEKI 1683

Query: 111  --------------EADRDNVPAL----LGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
                          E     VP      L QA +     +   S+E  K+A+++ P+   
Sbjct: 1684 NEKNVNLKLSEKDLEEKLQKVPVTAKDHLEQAFLYLTIKKVEQSIELLKKAIEIDPNYYD 1743

Query: 153  AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL---QANEAAGI-RKG 208
            A    +GL   +      A Q +++A++++ +  E++  L V+ L   + NEAA   +K 
Sbjct: 1744 AYD-KLGLIYKQKEMFEDAIQNYEKAIEINSKGFESIYNLMVIYLDLIKINEAAQFHQKI 1802

Query: 209  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
            +EK +   E      +A         +  ++ L E +   + A+        ++Y  L  
Sbjct: 1803 LEKNKDCSETNYRLGLA---------YQDKNMLNEAIVLFSKAIE-LDSKHVNAYVKLGN 1852

Query: 269  SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
             Y     Y+KA L     + EI+      +   GL     K  D   AL  ++K LEI P
Sbjct: 1853 VYLKLIMYDKA-LEVFQKILEIDTKQVVAYNNIGLVYYNQKKDDL--ALEYYQKALEINP 1909

Query: 329  DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS---------- 378
                +L   G +Y    Q +KA E  +KA  I+P D Q    + +L + +          
Sbjct: 1910 KYLLSLYNSGLVYETKNQNDKALECYQKALDINPNDKQTLDRMMKLFLKTGIIKDEFDVD 1969

Query: 379  --------DTGAALDAFKTARTLLKKAGEEVPIEVLN--------------NIGVIHFEK 416
                    +T +A D +K   T   K  ++  I+ LN               +G+I+ EK
Sbjct: 1970 NFLQKMEKNTQSAYDFYKQGYTFYSKKMKDQSIKCLNKAIEIDPNFFEAYDKLGLIYEEK 2029

Query: 417  GEFESAHQSFKDAL 430
            G  + A +++K  +
Sbjct: 2030 GMLDQAIENYKKVI 2043



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 13/270 (4%)

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGI 158
           +QA   +K V++ D  +  A          +  + +++EFYK+  ++ P      IRLG 
Sbjct: 604 DQAIEIYKRVIQIDPKSFLANYNIGVAYQMKNMFDEAIEFYKKVEEIFPKYFTVFIRLGN 663

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
                K+ +  +A + + +      E +E +  L  +D    +   I + +    +A E+
Sbjct: 664 VYGEKKMYE--EALENYNKVKDFSMEKLEEISNLENVD----KMNLIEEVIGCYIKAIEL 717

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
            P    A  YLA  +  T +   V++  +    V    P  + +Y  L   Y  K   +K
Sbjct: 718 NPEYVQAYYYLAIIYQNTNR---VDEAIDYYQKVIQLDPQHADAYLELGNKYLHKNLTDK 774

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A   +  +++   K ++    Y G+G +         AL  F+K LEI P+   ++   G
Sbjct: 775 ALECFYKTIEIEPKKYD---AYNGVGAIFYAQKKDDQALEYFKKALEINPNYILSIYNSG 831

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
            IY Q GQ EKA E  +K   I+P D ++ 
Sbjct: 832 LIYEQKGQSEKALECYKKVISINPADKKSL 861



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 130/327 (39%), Gaps = 21/327 (6%)

Query: 38   IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
            +  LN +G+ Y      + K  EK      A +YYNKA  I+     +    G +   + 
Sbjct: 1063 VVALNNIGLAYY-----DQKMNEK------ALEYYNKALEINPTFQQSIYNTGLVYEIQN 1111

Query: 98   EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-L 156
            + E+A   +  VL+ +     +LL    +    G  +          +V  +   A    
Sbjct: 1112 QYEKALEYYNKVLKINPTEKKSLLRVEKINEKIGNINSEKPEETSKKEVQNTLSSAKEYY 1171

Query: 157  GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
              G   Y   +  K+ Q  Q+A+++DP   EA   L ++     E     + ++   +A 
Sbjct: 1172 SKGYDFYAQMEDEKSIQCLQKAIEIDPNYYEAYDKLGLI---YGEKGMFDEAIQNYLKAL 1228

Query: 217  EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
            EI P     +  + N +F   +   +E+  E    + +  P  + + Y L   Y  +   
Sbjct: 1229 EINPKFFDIIPSIMNIYFDQNR---IEEAKEFHQKIVDLNPNCTETLYELGEVYQDQNMI 1285

Query: 277  EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            ++A   Y   +K      ++I  +  LG + L   D   AL  +++ LEI P        
Sbjct: 1286 DEAFECYQKILK---IDPQYIDAHIELGNIYLDKHDNDQALECYKRALEINPKEIVAYNN 1342

Query: 337  LGHIYVQLGQIEKAQELLRKAAKIDPR 363
            +G +Y  L   ++A E  +KA +IDP 
Sbjct: 1343 IGLVYYNLKNSDQALEYYKKALEIDPN 1369


>gi|403359316|gb|EJY79316.1| TPR repeat-containing protein [Oxytricha trifallax]
          Length = 1076

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 172/399 (43%), Gaps = 51/399 (12%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A +Y  +A  ID + P   V  G++   KGEV+QA   ++  ++    N+ A      + 
Sbjct: 635  AEEYLKRAIAIDENLPDALVALGRVFEKKGEVDQAIDCYERAIKQPVSNINAYFYLGIIH 694

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV- 186
              +  Y  S++ +K+ L       GA  L +   +   G+  KA + F+ AL+LDP N+ 
Sbjct: 695  EKKKEYKRSIQLFKQCLLFDQEHFGAC-LHLATLQANQGESHKAAKYFKHALKLDPNNIP 753

Query: 187  ----------------------------------EALVALAVMDLQANEAAGIRKGMEKM 212
                                              +A   L ++ L+  E   + K  E +
Sbjct: 754  ANFGLGKILHSTSENVDAPIPYYEFVINNDDKHYKAFCQLGIVYLEKGE---LEKAAEYL 810

Query: 213  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
            ++  ++ P   + L  + N  F TG      +  + AL    + P +  +   L  + + 
Sbjct: 811  KKCLQLNPKYVLGLVSMGNLLFETGHSKTAAKYHQQALK---YNPREIQALIGLGNALYD 867

Query: 273  KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
             G+ ++A  YY  ++ E++K    +  +Y LG     + +   A+ +++  +++ P+  E
Sbjct: 868  MGEPKEAIEYYKKAL-ELDKGLSDV--HYNLGNALYLIENTDLAIQHYKIAIDLNPNKPE 924

Query: 333  TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTAR 391
            +   LG+      + EKA    ++  ++DP +A AF +LG    + ++   A+ ++  A 
Sbjct: 925  SYYNLGNALCIKAEFEKAIVNYKRTIELDPYNAPAFYNLGNAYYMINEFDKAISSYGQAL 984

Query: 392  TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             L   +      E   NI   + +KG+F++A + +KD+L
Sbjct: 985  KLNPDSA-----ECHFNIASAYNDKGDFDNAIKHYKDSL 1018



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 170/385 (44%), Gaps = 21/385 (5%)

Query: 48   YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
            Y YLG I  K++E    +  + Q + +    D       +    L   +GE  +A+  FK
Sbjct: 687  YFYLGIIHEKKKE----YKRSIQLFKQCLLFDQEHFGACLHLATLQANQGESHKAAKYFK 742

Query: 108  IVLEADRDNVPALLGQACVEFNRGRYSDS-LEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
              L+ D +N+PA  G   +  +     D+ + +Y+  +        A    +G+   + G
Sbjct: 743  HALKLDPNNIPANFGLGKILHSTSENVDAPIPYYEFVINNDDKHYKAF-CQLGIVYLEKG 801

Query: 167  QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
            +L KA +  ++ LQL+P+ V  LV++  +  +   +   +   +  Q+A +  P    AL
Sbjct: 802  ELEKAAEYLKKCLQLNPKYVLGLVSMGNLLFETGHS---KTAAKYHQQALKYNPREIQAL 858

Query: 227  NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
              L N  +  G+     +  + AL + + G +  H  YNL  + +   + + A  +Y  +
Sbjct: 859  IGLGNALYDMGEPKEAIEYYKKALEL-DKGLSDVH--YNLGNALYLIENTDLAIQHYKIA 915

Query: 287  VK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
            +    NKP      YY LG       +F  A+ N+++ +E+ P N      LG+ Y  + 
Sbjct: 916  IDLNPNKPES----YYNLGNALCIKAEFEKAIVNYKRTIELDPYNAPAFYNLGNAYYMIN 971

Query: 346  QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 405
            + +KA     +A K++P  A+   ++      +D G   +A K  +  L+   +    E 
Sbjct: 972  EFDKAISSYGQALKLNPDSAECHFNIASAY--NDKGDFDNAIKHYKDSLQYDAKNS--ET 1027

Query: 406  LNNIGVIHFEKGEFESAHQSFKDAL 430
              N+G I+  +  ++ +H++F  AL
Sbjct: 1028 FVNLGTIYETQQAYKLSHEAFTQAL 1052



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 162/363 (44%), Gaps = 37/363 (10%)

Query: 47  YYTYL--GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVG--KGQLLLAKGEVEQA 102
           Y  YL  GK   KQR+    F  AT+ + KA  ++M++ S W     G + +  G+  + 
Sbjct: 547 YEIYLKQGKCYEKQRD----FDKATELFQKA--VEMNDQSPWAHFRLGWVCIRNGQKIKG 600

Query: 103 SSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
               K  LE D +N   L  LG+  +   +   +++ E+ KRA+ +  + P A+ + +G 
Sbjct: 601 IEHLKKSLELDPNNCDVLTKLGEVLMR-EQNALNEAEEYLKRAIAIDENLPDAL-VALGR 658

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
              K G++ +A   ++RA++    N+ A   L +          I +  ++ +R+ +++ 
Sbjct: 659 VFEKKGEVDQAIDCYERAIKQPVSNINAYFYLGI----------IHEKKKEYKRSIQLFK 708

Query: 221 YCAM-------ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
            C +       A  +LA      G+     +  + AL +    P    + + L +  HS 
Sbjct: 709 QCLLFDQEHFGACLHLATLQANQGESHKAAKYFKHALKLD---PNNIPANFGLGKILHST 765

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
            +   A + Y   V  IN   +    +  LG V L+ G+   A    +K L++ P     
Sbjct: 766 SENVDAPIPYYEFV--INNDDKHYKAFCQLGIVYLEKGELEKAAEYLKKCLQLNPKYVLG 823

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 392
           L ++G++  + G  + A +  ++A K +PR+ QA I LG  L    +   A++ +K A  
Sbjct: 824 LVSMGNLLFETGHSKTAAKYHQQALKYNPREIQALIGLGNALYDMGEPKEAIEYYKKALE 883

Query: 393 LLK 395
           L K
Sbjct: 884 LDK 886



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 159/361 (44%), Gaps = 49/361 (13%)

Query: 91  QLLLAKGEVEQASSAFKIVLEADRDNVPALL----GQACVEFNRGR-YSDSLEFYKRALQ 145
           QL + + ++++A    K +   D +  PAL     G  C      + + D+L+ Y ++ Q
Sbjct: 482 QLEIEEKKLDEALGMLKQINAVDPNFFPALQQELHGDICFRREESKSFQDALDHYIKSAQ 541

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 205
           ++P     I L  G C  K     KA + FQ+A++++ ++  A   L  + ++  +    
Sbjct: 542 INPE-NYEIYLKQGKCYEKQRDFDKATELFQKAVEMNDQSPWAHFRLGWVCIRNGQKI-- 598

Query: 206 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQLTETALAVTNHGPTKSHSY 263
            KG+E ++++ E+ P     L  L        Q+ L   E+  + A+A+  + P    + 
Sbjct: 599 -KGIEHLKKSLELDPNNCDVLTKLG-EVLMREQNALNEAEEYLKRAIAIDENLPD---AL 653

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
             L R +  KG+ ++A   Y  ++K+   P   I  Y+ LG +  K  +++ ++  F++ 
Sbjct: 654 VALGRVFEKKGEVDQAIDCYERAIKQ---PVSNINAYFYLGIIHEKKKEYKRSIQLFKQC 710

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 383
           L    ++      L  +    G+  KA +  + A K+DP +  A   LG++L S  T   
Sbjct: 711 LLFDQEHFGACLHLATLQANQGESHKAAKYFKHALKLDPNNIPANFGLGKILHS--TSEN 768

Query: 384 LDAFKTARTLLKKAGEEVPIE----VLNN----------IGVIHFEKGEFESAHQSFKDA 429
           +DA               PI     V+NN          +G+++ EKGE E A +  K  
Sbjct: 769 VDA---------------PIPYYEFVINNDDKHYKAFCQLGIVYLEKGELEKAAEYLKKC 813

Query: 430 L 430
           L
Sbjct: 814 L 814



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 47/337 (13%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACV 126
            A +Y+  A ++D +      G G++L +  E V+     ++ V+  D  +  A      V
Sbjct: 737  AAKYFKHALKLDPNNIPANFGLGKILHSTSENVDAPIPYYEFVINNDDKHYKAFCQLGIV 796

Query: 127  EFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
               +G    + E+ K+ LQ++P    G + +G  L  ++ G    A +  Q+AL+ +P  
Sbjct: 797  YLEKGELEKAAEYLKKCLQLNPKYVLGLVSMGNLL--FETGHSKTAAKYHQQALKYNPRE 854

Query: 186  VEALVAL--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
            ++AL+ L  A+ D+        ++ +E  ++A E+    +     L N  +      L  
Sbjct: 855  IQALIGLGNALYDM-----GEPKEAIEYYKKALELDKGLSDVHYNLGNALYLIENTDLAI 909

Query: 244  QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK--EINKP-------- 293
            Q  + A+ +    P K  SYYNL  +   K ++EKA + Y  +++    N P        
Sbjct: 910  QHYKIAIDLN---PNKPESYYNLGNALCIKAEFEKAIVNYKRTIELDPYNAPAFYNLGNA 966

Query: 294  ----HEFIFPYYGLGQVQLKL------------------GDFRSALTNFEKVLEIYPDNC 331
                +EF       GQ  LKL                  GDF +A+ +++  L+    N 
Sbjct: 967  YYMINEFDKAISSYGQA-LKLNPDSAECHFNIASAYNDKGDFDNAIKHYKDSLQYDAKNS 1025

Query: 332  ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
            ET   LG IY      + + E   +A KI+P   +A 
Sbjct: 1026 ETFVNLGTIYETQQAYKLSHEAFTQALKINPEVQKAI 1062



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 106/482 (21%), Positives = 190/482 (39%), Gaps = 64/482 (13%)

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
            Y   G+   K  DF  A   F+K +E+   +      LG + ++ GQ  K  E L+K+ +
Sbjct: 550  YLKQGKCYEKQRDFDKATELFQKAVEMNDQSPWAHFRLGWVCIRNGQKIKGIEHLKKSLE 609

Query: 360  IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNNIGVIHFEK 416
            +DP +      LGE+L+        +A   A   LK+A    E +P + L  +G +  +K
Sbjct: 610  LDPNNCDVLTKLGEVLMREQ-----NALNEAEEYLKRAIAIDENLP-DALVALGRVFEKK 663

Query: 417  GEFESAHQSFKDALGDGI-------WLTLLDSKTKTYVIDASASMLQFKDMQLF------ 463
            GE + A   ++ A+   +       +L ++  K K Y      S+  FK   LF      
Sbjct: 664  GEVDQAIDCYERAIKQPVSNINAYFYLGIIHEKKKEY----KRSIQLFKQCLLFDQEHFG 719

Query: 464  ---------------HRFENDGNH-VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 507
                           H+      H ++L  N +   F L ++L    + V A + Y   +
Sbjct: 720  ACLHLATLQANQGESHKAAKYFKHALKLDPNNIPANFGLGKILHSTSENVDAPIPYYEFV 779

Query: 508  FKYQD-YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVK 566
                D +  A+ +L  +   +  L+ + E + + L++N KY   L  +G+L L      K
Sbjct: 780  INNDDKHYKAFCQLGIVYLEKGELEKAAEYLKKCLQLNPKYVLGLVSMGNL-LFETGHSK 838

Query: 567  AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQH 626
                +   +   + ++  A + LGN  Y      +   PK    + +KA EL   +    
Sbjct: 839  TAAKYHQQALKYNPREIQALIGLGNALY------DMGEPKEAIEYYKKALELDKGL---- 888

Query: 627  TSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 686
             S+++   G  + L E      + DL  Q  + A   +    P+ + NL +    +  F 
Sbjct: 889  -SDVHYNLGNALYLIE------NTDLAIQHYKIAI-DLNPNKPESYYNLGNALCIKAEFE 940

Query: 687  LAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAG 746
             A+  Y+  +    YN  A     L   +Y   ++     S  +A+ L P +    F+  
Sbjct: 941  KAIVNYKRTIELDPYNAPA--FYNLGNAYYMINEFDKAISSYGQALKLNPDSAECHFNIA 998

Query: 747  VA 748
             A
Sbjct: 999  SA 1000



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 40/246 (16%)

Query: 165 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG---IRKGMEKMQRAFEIYPY 221
           L +L   +Q ++  L+LDPEN++ L +LA M +++    G       +   Q+A  I P 
Sbjct: 43  LIKLNFQQQLYEEILRLDPENIDGLNSLA-MCIKSTIPTGPQCFEIILPLYQKAISIDPE 101

Query: 222 CAMALNYLANHFFFTGQ-------HFLVEQLTE--TALAVTN------------------ 254
                N+    F++  +       HFL   + E   A A+ N                  
Sbjct: 102 -DFETNFNIGVFYYEQKKDYEKAIHFLKIAINEEKNATALFNLAVIYEEKGDKLKAKEAY 160

Query: 255 ---HGPTKSH--SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
                  +SH  S  NLA     +G   +A  +Y  ++K+  K  +    ++ +G    +
Sbjct: 161 AECQKADQSHYKSKVNLAILLDKEGKGHEANQFYQEALKQNPKDAKI---HHNMGINLKR 217

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
            G    AL++++K +E+ PDN   L   G +Y        A ++L K+   +  +  AF+
Sbjct: 218 AGKLDEALSHYKKAMELDPDNSTVLYNTGILYNIKSDYHNAVDVLEKSISKNKENVYAFL 277

Query: 370 DLGELL 375
            LG+ L
Sbjct: 278 ALGDAL 283


>gi|40063047|gb|AAR37903.1| TPR domain/sulfotransferase domain protein [uncultured marine
           bacterium 560]
          Length = 723

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 157/342 (45%), Gaps = 20/342 (5%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCP 151
           L + G++ +A  A K VL  D  N P L   + V +   G+   +++ +++AL + P   
Sbjct: 21  LYSSGKINEAIDAIK-VLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYT 79

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
             +   +GL   +LGQL  A + ++  L ++PE+ EA   L V      E   +   ++ 
Sbjct: 80  -EVNYNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVT---LKELEQLDAAVKS 135

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
            ++A  I P  A A N L N     GQ  +  +  E A+A+    P  + ++ NL  +  
Sbjct: 136 YEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIK---PDFAETHNNLGNALQ 192

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
             G  ++A   Y    + I    +F   YY LG V  +LG    A+ ++EK + I PD  
Sbjct: 193 GLGQLDEAVKSYE---QAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYD 249

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 391
           E    LG+    LGQ+++A +   +A  I    + A+ +LG +L        L    TA 
Sbjct: 250 EAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVL------RELGQVDTAV 303

Query: 392 TLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALG 431
              KKA    P   +  NN+G+   + G+ ++A ++ + A+ 
Sbjct: 304 RSYKKAIVIKPDYAKAHNNLGIALQDLGQMDTAVKNLEKAIA 345



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 17/282 (6%)

Query: 98  EVEQASSAFK-----IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           E+EQ  +A K     I ++ D       LG A  E   G+   +++ Y++A+ + P    
Sbjct: 125 ELEQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKEL--GQLDVAVKSYEKAIAIKPDF-A 181

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
                +G     LGQL +A +++++A+ +  +   A   L  +     E   +   ++  
Sbjct: 182 ETHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNV---LRELGQLDDAVKSY 238

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
           ++A  I P    A N L N     GQ     +  E A+A+ +     S++YYNL      
Sbjct: 239 EKAIAIKPDYDEAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDF---SNAYYNLGNVLRE 295

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
            G  + A   Y  ++  + KP ++   +  LG     LG   +A+ N EK + I PD  E
Sbjct: 296 LGQVDTAVRSYKKAI--VIKP-DYAKAHNNLGIALQDLGQMDTAVKNLEKAIAITPDFAE 352

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
               LG     LGQI+ A +   KA  I P  A+A+ +L  L
Sbjct: 353 AHHNLGIALQDLGQIDAAVKGYEKAIAIKPDYAEAYHNLSYL 394


>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
 gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1885

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 19/259 (7%)

Query: 100  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            E+A  A  +VLE +  +  AL   A V FN   Y ++   +++ L+  P  P ++   +G
Sbjct: 1611 ERALQALDLVLEREPAHRDALYNMALVLFNLEEYEEAARTFEQLLEASPEDPESLNY-LG 1669

Query: 160  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
            LC  +L  L +A +AF++A   +P+N EAL   A   ++ N    I++ +    R  EI 
Sbjct: 1670 LCLLELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNR---IQESLGYFDRILEIS 1726

Query: 220  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN---HGPTKSHSYYNLARSYHSKGDY 276
            P    A+NY    F       ++EQ  E   +  N     P    + YN+      +  Y
Sbjct: 1727 PENYDAMNYKGVAFC------MLEQYREALKSFDNVLKKDPNNIKAVYNVGVVCFKQKLY 1780

Query: 277  EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            E A   +  ++  IN  HE    Y GL     K GD+  AL  FEK+L I P + + +  
Sbjct: 1781 ETAARAFKEALT-INPWHEPSLRYLGLSLA--KTGDYEDALKAFEKLLRIKPQDPQAMNY 1837

Query: 337  LGHIYVQLGQIEKAQELLR 355
             G   V LG++EK  E ++
Sbjct: 1838 RG---VLLGKLEKYGEAIK 1853



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 35/374 (9%)

Query: 73   NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
            +K S  ++ +  T +G  QL   +   E A   F+ +LE +  +         V     +
Sbjct: 1447 SKISDPELEDAWTKIGLAQLKTRR--YEDAFDTFEKILEKNPTDADVWYLSGLVMRGLDQ 1504

Query: 133  YSDSLEFYKRALQVHPSCPGAI-RLGIGL---CRYKLGQLGKARQAFQRALQLDPENVEA 188
              +++E +++AL+++P+   A+ + G+GL   CRY+     +AR AF  AL L+PENV+ 
Sbjct: 1505 NEEAVEVFEKALELNPALTAALEQKGLGLLALCRYE-----EARDAFGSALALNPENVDI 1559

Query: 189  LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
            L + AV   +  +     K +E++      +P    A        +  G   +  Q  E 
Sbjct: 1560 LYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKAC-------YMLGIASIELQDYER 1612

Query: 249  AL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGL 303
            AL     V    P    + YN+A    +  +YE+A   +   ++     P    +    L
Sbjct: 1613 ALQALDLVLEREPAHRDALYNMALVLFNLEEYEEAARTFEQLLEASPEDPESLNY----L 1668

Query: 304  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
            G   L+L D + AL  FEK     P N E L       ++L +I+++     +  +I P 
Sbjct: 1669 GLCLLELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDRILEISPE 1728

Query: 364  --DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
              DA  +  +   ++        +A K+   +LKK      I+ + N+GV+ F++  +E+
Sbjct: 1729 NYDAMNYKGVAFCMLEQYR----EALKSFDNVLKKDPNN--IKAVYNVGVVCFKQKLYET 1782

Query: 422  AHQSFKDALGDGIW 435
            A ++FK+AL    W
Sbjct: 1783 AARAFKEALTINPW 1796



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 170/405 (41%), Gaps = 28/405 (6%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K ++F  A + + + + +D      W  +G+LL   G+ E+A   F  +LE   D   A 
Sbjct: 357 KLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQ 416

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
             +  V    GR+ ++LE   ++L+  P     + +  GL    +G+   A +AF+ A  
Sbjct: 417 KFRGTVLTGLGRFEEALESLTKSLEKEPENYN-MWIQKGLLLLDIGKFEPALEAFENAAG 475

Query: 181 LDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           L P++    +    A+  L+  E A     +E  +    + PY     N         G+
Sbjct: 476 LKPDDEICWMNRGFALYSLECYEEA-----LEAFKEGLHLNPYLEKGWN---KKGIVLGK 527

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
               E+  E         P    ++ N+     +  +YEKA   +   +K    P + + 
Sbjct: 528 LGKTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLK--TNPED-LD 584

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
             Y  G   L+LG   +AL   EKV+ + PD  +   +LG   ++LG++EKA E   K A
Sbjct: 585 ALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDLAYSLGVALMELGELEKALETFEKLA 644

Query: 359 KIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
             +P D +     G+L +   +   AL AF+  + LL+K G     E     G+      
Sbjct: 645 AKNPEDLEIQCRKGKLAMELGEHETALQAFE--KVLLEKPGSR---EAWYRKGLALLNME 699

Query: 418 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
            FE A ++F +         ++ + TK    + + ++  F  MQL
Sbjct: 700 RFEDAVKAFDE--------VIVRNTTKDPSYEDAGTLKGFAQMQL 736



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 166/377 (44%), Gaps = 28/377 (7%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPA 119
           K E +  A + + +A  I       W  KG L+LAK E  E A   F  ++     +  A
Sbjct: 153 KAERYEEALEDFERALEISPRNSEAWYAKG-LILAKIEKYENALECFDFLIREKPKDTAA 211

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           L  +  +  N G+  ++L   +  L+  P+   A+    G+   +L +   A +   + L
Sbjct: 212 LEQKCLILANLGKNEEALGALEDFLKKFPANEAAL-YHKGILLSELSRYEDAERTISKVL 270

Query: 180 QLDPENVEALV--ALAVMDL-QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 236
           +L+P + EA      A++ L + NEA      +E    A  + P    A NY     F  
Sbjct: 271 KLNPGHREAWFRKGFALVQLLRLNEA------IEAFDEAIRLDPAYFEAWNY---KCFAL 321

Query: 237 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
            +  + E+  E    +    P     +YN A +     ++ +A   + A V E++  +  
Sbjct: 322 MKLEVYEEALEAFDTILETYPDMEEIWYNRALALLKLQNFPEAARSF-ARVTELDPGN-- 378

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
              ++  G++  + G +  AL  F+++LE +PD  E  K  G +   LG+ E+A E L K
Sbjct: 379 TDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLGRFEEALESLTK 438

Query: 357 AAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 413
           + + +P +   +I  G LL+  D G    AL+AF+ A  L  K  +E+      N G   
Sbjct: 439 SLEKEPENYNMWIQKGLLLL--DIGKFEPALEAFENAAGL--KPDDEI---CWMNRGFAL 491

Query: 414 FEKGEFESAHQSFKDAL 430
           +    +E A ++FK+ L
Sbjct: 492 YSLECYEEALEAFKEGL 508



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 93   LLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
            LL  G   +A S FK VL  D  N  AL  L  AC  F +G Y ++LE ++R L  +P+ 
Sbjct: 1037 LLRLGRYAEAESGFKEVLALDPANTEALAHLSTAC--FKKGHYKEALEIFERVLSQNPA- 1093

Query: 151  PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
               I    GL     G+  +A +AF   L+L P+   AL
Sbjct: 1094 RKTILFRKGLALKAFGKNLEALEAFDLVLKLKPDCTYAL 1132



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 23/282 (8%)

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGME 210
           A + G+ L + K  +  KA   F + L  DP++ EAL    LA+++ +  + A     ++
Sbjct: 8   AFQRGLDLVKRK--RYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEA-----LD 60

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
               A ++ P  + AL      F   G+    E+  E   +     P     +Y +  ++
Sbjct: 61  SFNDALQLEPGNSDALYRKGTCFAALGR---FEEALEAYESALESSPDTPEIWYMMGLAF 117

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
               + E+A    +   K +    E+      +G V  K   +  AL +FE+ LEI P N
Sbjct: 118 ---AEMERAEASILCFEKALELKPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRN 174

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
            E   A G I  ++ + E A E      +  P+D  A     + LI ++ G   +A    
Sbjct: 175 SEAWYAKGLILAKIEKYENALECFDFLIREKPKDTAALEQ--KCLILANLGKNEEALGAL 232

Query: 391 RTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 430
              LKK     P     L + G++  E   +E A ++    L
Sbjct: 233 EDFLKK----FPANEAALYHKGILLSELSRYEDAERTISKVL 270



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 161/391 (41%), Gaps = 47/391 (12%)

Query: 77   RIDMHEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA------LLGQACVE 127
            ++ + +P +   W  KG  LL     E A  AF  V+  +    P+      L G A ++
Sbjct: 676  KVLLEKPGSREAWYRKGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQ 735

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
               G +  +LE ++ AL+ +P   G      GL   +L +  +A +AF+ AL+L+PE  +
Sbjct: 736  L--GNFLPALETFEGALEKNPDS-GITWYYKGLTLQELQRQEEAARAFESALRLNPEFSD 792

Query: 188  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF-LVEQLT 246
            A    AV   +  +       +E ++   E  P     LN  A  F   G+H   VE L+
Sbjct: 793  AFEYRAVCLFKTGQ---YETALEALEALLENDPENLSTLNSRAICFLELGRHKEAVEALS 849

Query: 247  ETALAVTNHGPTK---SHSYYNLARSYHSKGDYEKAGLYYM------------ASVKEIN 291
                       TK     + + L   Y   G Y++A   +             AS +E  
Sbjct: 850  NLLEINPEREETKFRLDEAKFRLGIEYFELGRYDEAFPLFEGINEEVKAKNGEASGEESE 909

Query: 292  KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
              H+   P Y  G + ++   +  AL  F K+ E  P   E    +G    +LG+ E+A 
Sbjct: 910  NSHK-DSPLYWKGLMFIRQEAYEKALEIFSKLTEQNPQFAEGWYFIGMSCSKLGKHEEAS 968

Query: 352  ELLRKAAKIDPRDAQAFIDLGEL-----LISSDTG---AALDAFKTARTLLKKAGEEVPI 403
            + L+KA +IDP    AF DL ++     L   + G    AL AF+ A + + +  E  P 
Sbjct: 969  KALKKALEIDP----AFRDLHDIYYRLGLSCFELGNFEEALKAFEEALSTVPENSERNPD 1024

Query: 404  E---VLNNIGVIHFEKGEFESAHQSFKDALG 431
            E   ++    +     G +  A   FK+ L 
Sbjct: 1025 EAQDIMYKKSLSLLRLGRYAEAESGFKEVLA 1055



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 113/297 (38%), Gaps = 48/297 (16%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN--VPALLGQAC 125
           A   +N A +++         KG    A G  E+A  A++  LE+  D   +  ++G A 
Sbjct: 58  ALDSFNDALQLEPGNSDALYRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAF 117

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
            E  R     S+  +++AL++ P    A    +G    K  +  +A + F+RAL++ P N
Sbjct: 118 AEMERAE--ASILCFEKALELKPEYTAAC-CAMGTVAGKAERYEEALEDFERALEISPRN 174

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
            EA  A  +          I   +EK + A E +             F    +      L
Sbjct: 175 SEAWYAKGL----------ILAKIEKYENALECF------------DFLIREKPKDTAAL 212

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            +  L + N G  K+         +  K    +A LY+                    G 
Sbjct: 213 EQKCLILANLG--KNEEALGALEDFLKKFPANEAALYHK-------------------GI 251

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           +  +L  +  A     KVL++ P + E     G   VQL ++ +A E   +A ++DP
Sbjct: 252 LLSELSRYEDAERTISKVLKLNPGHREAWFRKGFALVQLLRLNEAIEAFDEAIRLDP 308


>gi|238503452|ref|XP_002382959.1| RNA polymerase II transcription elongation factor (Ctr9), putative
           [Aspergillus flavus NRRL3357]
 gi|220690430|gb|EED46779.1| RNA polymerase II transcription elongation factor (Ctr9), putative
           [Aspergillus flavus NRRL3357]
          Length = 1032

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 150/654 (22%), Positives = 259/654 (39%), Gaps = 62/654 (9%)

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
           Q+AF++     M       +F     +  VE L   A+  T+     S  ++ L R  H 
Sbjct: 159 QKAFKLDKEYPMTGALFGGYFLLRKSYSTVETLARRAIEHTDVMQIASDGWFLLGRKAHY 218

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
           +GD  +A  +Y  S +      +   P  +G  Q+Q+   D+  A    EK+++    N 
Sbjct: 219 EGDLTRAAEFYNRSDQARGGGDKGYLPARFGTVQMQVSNKDYDGAKFRLEKIIQ-QTKNP 277

Query: 332 ETLKALGHIYVQ-------LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL 384
           E +  LG +Y +       +G  E      +KA  +       + D G+ L   ++    
Sbjct: 278 ECMILLGALYAEEVFTSERIGSKEDKSAEAKKAISLLESVRALWKDEGKKLSPEESVLVY 337

Query: 385 DAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 443
            A    RT  +K+ + +  +E L    ++  E  E     +  K AL   +   LL S  
Sbjct: 338 LARLYERTAPEKSMQCLSQLEELQLAAIVEDEHREGLENEEQLKAALRVNLPPQLL-SNM 396

Query: 444 KTYV-----IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA 498
             ++     +D + +M +          E +  H +      T+ +NL R  E       
Sbjct: 397 GCFLYQAEKVDQARTMFEMALNACVRSQEKESEH-DTDALVTTISYNLGRTYEASDMPEE 455

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE 558
           A  +Y  +L ++ DY +A  RL  IA       L     +E  K   K   A S   +LE
Sbjct: 456 AKKVYEGLLERHGDYTEASARLTYIA-------LRQSPTDEGPKRMAKLYEADST--NLE 506

Query: 559 LKND-DWVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAA--LRNE 601
           ++    W  +K   R A+ A D +              D Y+   +GN +   A  +R E
Sbjct: 507 VRALFGWYLSKSKKRVANLAEDQEQRHYKHTLQYFDKHDRYSLTGMGNVHLMTARDMRRE 566

Query: 602 KRAPKLEATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEA 659
               K +   + E+A E + + +     N YAA G  + L + K  +  +  +F+++++ 
Sbjct: 567 NDQEKEKRRKMYERAVEFFDKALQLDPQNAYAAQGIAIALVDAKKDYSTAVHIFSKIRDT 626

Query: 660 ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY--- 716
              S       V++NL HVY     +  +++ Y+  L K     DAQIL  L R      
Sbjct: 627 LRDS------SVYLNLGHVYAELRQYTRSIEHYEAALSKDRAR-DAQILACLGRVWLLKG 679

Query: 717 EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRST 770
           + E      K+ L    RA  +APS   L F+      + ++   +L +T++T  +V+  
Sbjct: 680 KQEMSLSAMKTALDYARRAHSVAPSQVHLEFNVAFVQNQIASLVYSLPETQKTVQDVQDA 739

Query: 771 VAELENAVRVFSHLSAASN-LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER 823
              L  AV  F  ++   N  +  G  E++ N      K L  A +  RE  E+
Sbjct: 740 SDGLREAVESFGRIAQTKNPPYPAGALEQRANMGKTIIKQLERALQSQREYEEK 793


>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
 gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
          Length = 810

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 171/364 (46%), Gaps = 24/364 (6%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFN 129
           Y KA +++ ++   +   G  L  +G++E+A +A++  ++ + +   A   LG A  +  
Sbjct: 86  YQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSD-- 143

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           +G+  +++  Y++A+Q++P+   A   LGI L     G+L +A  A+Q+A+QL+P   +A
Sbjct: 144 QGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALS--DQGKLEEAIAAYQKAIQLNPNYADA 201

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
              L V      +   + + +   Q+A ++ P  A A N L    +  G+   +E+    
Sbjct: 202 YYNLGVALF---DQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGK---LEEAIAA 255

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
                   P  + +Y NL  +   +G  ++A   Y    K I     F   Y GLG    
Sbjct: 256 YQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQ---KAIQLNPNFALAYNGLGNALS 312

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
             G    A+  ++K +++ P+       LG+     G+ ++A    +KA ++DP DA A+
Sbjct: 313 DQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDANAY 372

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSF 426
            +LG  L   + G   +A     T  +KA +  P   L  NN+G   + +G+ E A  ++
Sbjct: 373 NNLG--LALRNQGKRDEAI----TAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAY 426

Query: 427 KDAL 430
           + A+
Sbjct: 427 QKAI 430



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 181/417 (43%), Gaps = 52/417 (12%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG   + Q + EE    A   Y KA +++ +    +   G  L  +G++E+A +A++
Sbjct: 134 YNNLGNALSDQGKLEE----AIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQ 189

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             ++ + +   A        F++G+  +++  Y++A+Q+ P+   A    +G   YK G+
Sbjct: 190 KAIQLNPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYN-NLGAALYKQGK 248

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMAL 226
           L +A  A+Q+A+QL+P   EA   L V    A    G R + +   Q+A ++ P  A+A 
Sbjct: 249 LEEAIAAYQKAIQLNPNLAEAYNNLGV----ALSDQGKRDEAIAAYQKAIQLNPNFALAY 304

Query: 227 NYLANHFFFTGQ--------HFLVEQLTETALAVTNHG---------------------- 256
           N L N     G+           ++     ALA    G                      
Sbjct: 305 NGLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQL 364

Query: 257 -PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
            P  +++Y NL  +  ++G  ++A   Y    K I     F   Y  LG      G    
Sbjct: 365 DPNDANAYNNLGLALRNQGKRDEAITAYQ---KAIQLNPNFALAYNNLGNALYSQGKREE 421

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           A+  ++K +++ P+       LG+     G+ ++A    +KA +++P  A A+ +LG  L
Sbjct: 422 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNAL 481

Query: 376 ISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
             SD G   +A  T     +KA +  P   L  NN+G    ++G+   A  +++ AL
Sbjct: 482 --SDQGKLNEAIAT----YQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKAL 532



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 17/269 (6%)

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
           K+G+  +A   F+R ++LDP   +A   L   +  Q      + + +   Q+A ++ P  
Sbjct: 41  KMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGK----LDEAIAAYQKAIQLNPND 96

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
           A A N L N  ++ G+   +E+            P  + +Y NL  +   +G  E+A   
Sbjct: 97  ADAYNNLGNALYYQGK---LEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQGKLEEAIAA 153

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
           Y    K I     F   YY LG      G    A+  ++K +++ P+  +    LG    
Sbjct: 154 YQ---KAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVALF 210

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEV 401
             G++++A    +KA ++DP DA A+ +LG  L        A+ A++ A  L        
Sbjct: 211 DQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLA--- 267

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             E  NN+GV   ++G+ + A  +++ A+
Sbjct: 268 --EAYNNLGVALSDQGKRDEAIAAYQKAI 294



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 6/128 (4%)

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G+   K+G +  A   F +V+E+ P+  +    LG+     G++++A    +KA +++P 
Sbjct: 36  GRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPN 95

Query: 364 DAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
           DA A+ +LG  L        A+ A++ A  L          +  NN+G    ++G+ E A
Sbjct: 96  DADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFA-----QAYNNLGNALSDQGKLEEA 150

Query: 423 HQSFKDAL 430
             +++ A+
Sbjct: 151 IAAYQKAI 158


>gi|145553124|ref|XP_001462237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430075|emb|CAK94864.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2950

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 155/344 (45%), Gaps = 20/344 (5%)

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            G L + K + + A+ +F+ +L  + ++  AL+  A +   +G +  + ++ K AL+  P+
Sbjct: 2572 GTLYMKKKDFKSAAESFRTLLRINNEHPEALIEYATISSIQGNFEKAKKYLKHALKSSPN 2631

Query: 150  CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
             P A +RLG  + + KL +L  A + F +  ++DP N +A   +    +Q  E   + KG
Sbjct: 2632 NPVANMRLG-RIYQTKLNELNSAIECFAKVSRVDPTNYKAYYYMGQCYIQKGE---LNKG 2687

Query: 209  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
            +E M  + +      +A   + N  +   Q     +  + A+   +       +   L  
Sbjct: 2688 IENMNMSLKHNQSFGLAWKAVGNIMYEKNQPAKALRYFQKAI---DSDKNDMEAKIGLGN 2744

Query: 269  SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
             Y+ +  +E+A   Y   +  +++  E     Y +        DF  A+ +++K L I P
Sbjct: 2745 CYYLQEQFEQAIQIY-EEISHLDQNEEL---EYNMANCYYMKNDFEEAVLHYQKALSINP 2800

Query: 329  DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
            D  E    LG+ Y  + + E+A E   +  K DP+ + AF +        +T   L  ++
Sbjct: 2801 DKIECYYNLGNTYCIMEKFEEALECFERVVKDDPKHSAAFYNYA------NTFFVLQDYE 2854

Query: 389  TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             A    +KA E  P  ++  N +  ++ EKG+  +A +   +++
Sbjct: 2855 NAAKYFEKAVELQPENVDWRNYVAQLYIEKGDLNAAKRHLDESM 2898



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 129/291 (44%), Gaps = 15/291 (5%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A + + K SR+D      +   GQ  + KGE+ +      + L+ ++    A      + 
Sbjct: 2653 AIECFAKVSRVDPTNYKAYYYMGQCYIQKGELNKGIENMNMSLKHNQSFGLAWKAVGNIM 2712

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + + + + +L ++++A+    +   A ++G+G C Y   Q  +A Q ++    LD +N E
Sbjct: 2713 YEKNQPAKALRYFQKAIDSDKNDMEA-KIGLGNCYYLQEQFEQAIQIYEEISHLD-QNEE 2770

Query: 188  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                +A      N+     + +   Q+A  I P        L N +    +    E+  E
Sbjct: 2771 LEYNMANCYYMKND---FEEAVLHYQKALSINPDKIECYYNLGNTYCIMEK---FEEALE 2824

Query: 248  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
                V    P  S ++YN A ++    DYE A  Y+  +V E+ +P    +  Y + Q+ 
Sbjct: 2825 CFERVVKDDPKHSAAFYNYANTFFVLQDYENAAKYFEKAV-EL-QPENVDWRNY-VAQLY 2881

Query: 308  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ----IEKAQELL 354
            ++ GD  +A  + ++ + + P N +TL    + Y Q+G     I+KA++ L
Sbjct: 2882 IEKGDLNAAKRHLDESMRLQPRNPDTLVRYANYYYQIGNYKEAIQKAKQTL 2932



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 23/242 (9%)

Query: 156  LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
            L I  C  KLG+  KA + ++RA+  + ++      L  M ++  +   +++G++ + +A
Sbjct: 2429 LEIARCYQKLGEFEKAERTYRRAIDANNKDYLPYYKLGWMQIKNKQ---LKEGIDNLSKA 2485

Query: 216  FEIYPYCAMALNYLANHFFFTGQHFLV--EQLT--ETALAVTNHG----PTKSHSYYNLA 267
             +   Y  M +          G+  ++  E  T  + A+ V + G    P        LA
Sbjct: 2486 -QTLDYQNMDI------IIKLGESLMIYDEDPTAVDEAVIVLHKGMIVDPLNYECTNALA 2538

Query: 268  RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
            R+Y  KGD   A  Y   + ++   P+     +Y LG + +K  DF+SA  +F  +L I 
Sbjct: 2539 RAYEKKGDLVNAIKYGKLATEQ---PNSNSNSHYFLGTLYMKKKDFKSAAESFRTLLRIN 2595

Query: 328  PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS--SDTGAALD 385
             ++ E L     I    G  EKA++ L+ A K  P +  A + LG +  +  ++  +A++
Sbjct: 2596 NEHPEALIEYATISSIQGNFEKAKKYLKHALKSSPNNPVANMRLGRIYQTKLNELNSAIE 2655

Query: 386  AF 387
             F
Sbjct: 2656 CF 2657



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 108/499 (21%), Positives = 201/499 (40%), Gaps = 63/499 (12%)

Query: 259  KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
            ++ SY  +AR Y   G++EKA   Y  ++   NK +    PYY LG +Q+K    +  + 
Sbjct: 2424 RAKSYLEIARCYQKLGEFEKAERTYRRAIDANNKDY---LPYYKLGWMQIKNKQLKEGID 2480

Query: 319  NFEKVLEIYPDNCETLKALGH---IYVQ-LGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            N  K   +   N + +  LG    IY +    +++A  +L K   +DP + +    L   
Sbjct: 2481 NLSKAQTLDYQNMDIIIKLGESLMIYDEDPTAVDEAVIVLHKGMIVDPLNYECTNALARA 2540

Query: 375  LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN---IGVIHFEKGEFESAHQSFKDALG 431
                  G  ++A K       K   E P    N+   +G ++ +K +F+SA +SF+    
Sbjct: 2541 Y--EKKGDLVNAIKYG-----KLATEQPNSNSNSHYFLGTLYMKKKDFKSAAESFR---- 2589

Query: 432  DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV--ELPWNKVTVLFNLARL 489
                L + +   +  +  A+ S +Q      F + +    H     P N V  +  L R+
Sbjct: 2590 --TLLRINNEHPEALIEYATISSIQGN----FEKAKKYLKHALKSSPNNPVANM-RLGRI 2642

Query: 490  LEQIHDTVAASV-----LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 544
             +   + + +++     + R+    Y+ Y   Y+    I K    L   IE +N +LK N
Sbjct: 2643 YQTKLNELNSAIECFAKVSRVDPTNYKAYY--YMGQCYIQKGE--LNKGIENMNMSLKHN 2698

Query: 545  GKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRA 604
              +  A   +G++  + +   KA   F+ A D +D  D  A + LGN  Y      +   
Sbjct: 2699 QSFGLAWKAVGNIMYEKNQPAKALRYFQKAID-SDKNDMEAKIGLGNCYYLQEQFEQAIQ 2757

Query: 605  PKLEATHLEKAKEL-YTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGS 663
               E +HL++ +EL Y      +  N +       VL  +    ++ D            
Sbjct: 2758 IYEEISHLDQNEELEYNMANCYYMKNDFEE----AVLHYQKALSINPDKI---------- 2803

Query: 664  VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQD 723
                  + + NL + Y     F  A++ ++  ++    ++ A      A T +  + +++
Sbjct: 2804 ------ECYYNLGNTYCIMEKFEEALECFERVVKDDPKHSAA--FYNYANTFFVLQDYEN 2855

Query: 724  CKKSLLRAIHLAPSNYTLR 742
              K   +A+ L P N   R
Sbjct: 2856 AAKYFEKAVELQPENVDWR 2874



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 13/291 (4%)

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            G + +++ E ++A   F+I  +  +D   + L  A      G +  +   Y+RA+  +  
Sbjct: 2398 GTIFVSEKEWKRALHHFRIGYQYSQDRAKSYLEIARCYQKLGEFEKAERTYRRAIDANNK 2457

Query: 150  --CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIR 206
               P      +G  + K  QL +      +A  LD +N++ ++ L   + +   +   + 
Sbjct: 2458 DYLP---YYKLGWMQIKNKQLKEGIDNLSKAQTLDYQNMDIIIKLGESLMIYDEDPTAVD 2514

Query: 207  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
            + +  + +   + P      N LA  +   G   LV  +    LA T    + S+S+Y L
Sbjct: 2515 EAVIVLHKGMIVDPLNYECTNALARAYEKKGD--LVNAIKYGKLA-TEQPNSNSNSHYFL 2571

Query: 267  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
               Y  K D++ A   +   ++  N+  E +  Y  +  +Q   G+F  A    +  L+ 
Sbjct: 2572 GTLYMKKKDFKSAAESFRTLLRINNEHPEALIEYATISSIQ---GNFEKAKKYLKHALKS 2628

Query: 327  YPDNCETLKALGHIY-VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
             P+N      LG IY  +L ++  A E   K +++DP + +A+  +G+  I
Sbjct: 2629 SPNNPVANMRLGRIYQTKLNELNSAIECFAKVSRVDPTNYKAYYYMGQCYI 2679



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 50/263 (19%)

Query: 182 DPENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           D +N+EA  L+A A+ +   N      + +E M RA EI P   + L             
Sbjct: 26  DNQNIEAYNLLAYAIKNDLENTTDAYMRSLEIMHRALEILPNNTLTL------------- 72

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
                                   +N+A +Y+   D+ +A  YY   + +INK +++   
Sbjct: 73  ------------------------FNMASTYYEMQDFPQAINYYQQLI-QINKVNDY-RA 106

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           ++ L     K G+ + AL  +++ +   P+    +    ++ +Q+G+  +A+  L    K
Sbjct: 107 FFNLAMCYEKAGENQQALEMYQQSIRSNPNFSSAVINYSNLLMQMGKQAQARYTLENYLK 166

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
            +  D +A  +L  +L        ++         KK  +   I  + N GV   ++G+ 
Sbjct: 167 NNKGDMRALNNLNIILAEKQIDQKVEEN------FKKINQSGAITSVYNNGVFLSKQGKL 220

Query: 420 ESAHQSFK---DALGDGIWLTLL 439
           + A Q FK   D L D +   LL
Sbjct: 221 QEALQIFKQLVDKLKDEVEEPLL 243


>gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 1280

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 111/506 (21%), Positives = 200/506 (39%), Gaps = 29/506 (5%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y +A  I+ +    + G+G      G+ + A   +   +  + +   A   +    FN  
Sbjct: 501 YTQAININPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLE 560

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               S++ Y +A+ ++P+   A     G+ R +LG   +A   + +AL ++P++ E  VA
Sbjct: 561 DKQGSVDDYTQAININPNYAQAY-YAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVA 619

Query: 192 --LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
             L   +L  N+ A     ++   +A  + P  A   N   N           ++  +  
Sbjct: 620 RGLTRSELGDNQGA-----IDDYTQALNLNPDYACIYN---NRGIVRSDIADYQRAIDDY 671

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
               N  P  + +YYN A  Y+  G+Y++A   Y  S++  +   +    Y G G    K
Sbjct: 672 TEAINISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCAD---AYIGRGTALYK 728

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           LGD + A+ +F   L+I P   +     G +  +LG  + A      A  IDP  A A+ 
Sbjct: 729 LGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDIDPSYADAYN 788

Query: 370 DLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 428
           + G +     D   A++ F  A  +     +       NN G++    GE + A + F  
Sbjct: 789 NRGIVRYELRDNRGAIEDFNHALNINSNYAQ-----AYNNRGIVRICLGERQLAIEDFTQ 843

Query: 429 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 488
           A       T++ S      I+   +  +  + Q     E+    + +  N      N   
Sbjct: 844 A-------TIIASNYTESYINRGYARYELGNRQ--KAIEDFNQALNINPNYAQAYNNRGV 894

Query: 489 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 548
               + D+  A   +   L     Y +AY     +     + Q +IE  N+ALK+N  Y 
Sbjct: 895 AYTDLGDSEWAKDDFSQALQINPYYAEAYNNRGIVCYKLGDRQGAIEDFNQALKINSNYV 954

Query: 549 NALSMLGDLELKNDDWVKAKETFRAA 574
            A ++ G++  +  D   A E F  A
Sbjct: 955 EAYNIRGNIRYELGDRQGAIEDFNRA 980



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 142/676 (21%), Positives = 256/676 (37%), Gaps = 115/676 (17%)

Query: 7   KQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 66
           KQG ++ F Q++       I+ ++AD    R       G+ Y  LG  +           
Sbjct: 324 KQGAIDDFNQVIR------INSHFADGYAAR-------GLVYCDLGNHQE---------- 360

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
            A   +++A RI+ +    +  +G      G+ + A   +   L  +     A   +  +
Sbjct: 361 -AINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGII 419

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
             + G    +++   +A++++P+   A     G  R  LG    A   + +AL++D   V
Sbjct: 420 RSDLGSNKAAMDDCTQAIRINPNYAEAYN-NRGAIRTYLGNYQGAIDDYIQALRVDSNYV 478

Query: 187 EALVALAV--MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG-QHFLVE 243
           EA        ++L+ NE A     ++   +A  I P  A A        F  G +   ++
Sbjct: 479 EAYYNWGTTRINLEDNEGA-----IDDYTQAININPNYAQAYYGRGIARFNLGDKQGAID 533

Query: 244 QLTETALAVTNHGPTKSHSYYN-------LARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
             T+      N  P  + +YYN       L     S  DY +A          IN    +
Sbjct: 534 DYTQ----AINTNPNYAQAYYNRGIARFNLEDKQGSVDDYTQA----------ININPNY 579

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
              YY  G ++ +LGD   A+ N+ + L I PD+ ET  A G    +LG  + A +   +
Sbjct: 580 AQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTRSELGDNQGAIDDYTQ 639

Query: 357 AAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 413
           A  ++P  A  + + G  ++ SD      A+D +  A  +          +   N  +++
Sbjct: 640 ALNLNPDYACIYNNRG--IVRSDIADYQRAIDDYTEAINISPDYA-----DAYYNRAIVY 692

Query: 414 FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ-----LFHRFEN 468
           ++ G ++ A   +  +L        + S      I    ++ +  D Q       H  + 
Sbjct: 693 YDLGNYQRAIDDYTQSL-------EIKSNCADAYIGRGTALYKLGDSQGAINDFHHALDI 745

Query: 469 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
           D ++ +   N+  V + L      I D       +   L     Y DAY     +     
Sbjct: 746 DPSYADAYNNRGIVRYELGDHQGAIGD-------FHHALDIDPSYADAYNNRGIVRYELR 798

Query: 529 NLQLSIELVNEALKVNGKYPNALS-------MLGDLELKNDDWVKAKETFRAASDATDG- 580
           + + +IE  N AL +N  Y  A +        LG+ +L  +D+ +A      AS+ T+  
Sbjct: 799 DNRGAIEDFNHALNINSNYAQAYNNRGIVRICLGERQLAIEDFTQATII---ASNYTESY 855

Query: 581 -KDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVV 639
               YA   LGN                     +KA E + + +  + +   A N  GV 
Sbjct: 856 INRGYARYELGN--------------------RQKAIEDFNQALNINPNYAQAYNNRGVA 895

Query: 640 LAEKGQFDVSKDLFTQ 655
             + G  + +KD F+Q
Sbjct: 896 YTDLGDSEWAKDDFSQ 911



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 173/445 (38%), Gaps = 85/445 (19%)

Query: 30   YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGK 89
            YAD  Y R  +   LG Y          QR  ++        Y ++  I  +    ++G+
Sbjct: 681  YADAYYNRAIVYYDLGNY----------QRAIDD--------YTQSLEIKSNCADAYIGR 722

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            G  L   G+ + A + F   L+ D     A   +  V +  G +  ++  +  AL + PS
Sbjct: 723  GTALYKLGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDIDPS 782

Query: 150  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
               A     G+ RY+L     A + F  AL ++    +A           N    +R  +
Sbjct: 783  YADAYN-NRGIVRYELRDNRGAIEDFNHALNINSNYAQAY----------NNRGIVRICL 831

Query: 210  EKMQRAFEIYPYCAM-ALNYLANHFFFTGQHFLVEQLTETALAV------TNHGPTKSHS 262
             + Q A E +    + A NY  +   +  + +   +L     A+       N  P  + +
Sbjct: 832  GERQLAIEDFTQATIIASNYTES---YINRGYARYELGNRQKAIEDFNQALNINPNYAQA 888

Query: 263  YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSAL 317
            Y N   +Y   GD E A   +  +++        I PYY       G V  KLGD + A+
Sbjct: 889  YNNRGVAYTDLGDSEWAKDDFSQALQ--------INPYYAEAYNNRGIVCYKLGDRQGAI 940

Query: 318  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +F + L+I  +  E     G+I  +LG  + A E   +A           + LG L ++
Sbjct: 941  EDFNQALKINSNYVEAYNIRGNIRYELGDRQGAIEDFNRA-----------LSLGSLDLT 989

Query: 378  SDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFE------KGEF---ESAHQSF 426
             +               +K G  + I++ N  N+ ++ FE       GE    +++   F
Sbjct: 990  ENL-----------KFWEKGGLTLTIKLRNYLNLKILSFEVVSKKNSGEIIKRDASAIYF 1038

Query: 427  KDALGDGIWLTLLDSKTKTYVIDAS 451
             + LGD I L +++    T+ I+ +
Sbjct: 1039 VEDLGDDITLEMVEIPGGTFTINPA 1063



 Score = 40.0 bits (92), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 85/409 (20%), Positives = 151/409 (36%), Gaps = 56/409 (13%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y   G V   LG+ + A+ +F + + I P+  +     G    QLG  + A +   ++  
Sbjct: 345 YAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTQSLN 404

Query: 360 IDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 416
           ++P+ A A+ + G  +I SD G   AA+D    A  +     E       NN G I    
Sbjct: 405 LNPKFASAYYNRG--IIRSDLGSNKAAMDDCTQAIRINPNYAE-----AYNNRGAIRTYL 457

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ-----LFHRFENDGN 471
           G ++ A   +  AL        +DS       +   + +  +D +            + N
Sbjct: 458 GNYQGAIDDYIQAL-------RVDSNYVEAYYNWGTTRINLEDNEGAIDDYTQAININPN 510

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL- 530
           + +  + +    FNL      I D       Y   +    +Y  AY        AR NL 
Sbjct: 511 YAQAYYGRGIARFNLGDKQGAIDD-------YTQAINTNPNYAQAYYNRGI---ARFNLE 560

Query: 531 --QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT-DGKDSYATL 587
             Q S++   +A+ +N  Y  A    G L  +  D  +A   +  A +   D  ++Y   
Sbjct: 561 DKQGSVDDYTQAININPNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVAR 620

Query: 588 SLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 647
            L                + E    + A + YT+ +  +       N  G+V ++   + 
Sbjct: 621 GL---------------TRSELGDNQGAIDDYTQALNLNPDYACIYNNRGIVRSDIADYQ 665

Query: 648 VSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
            + D +T+       ++     D + N A VY+  GN+  A+  Y   L
Sbjct: 666 RAIDDYTEAI-----NISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSL 709



 Score = 39.7 bits (91), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKP----HEFIFPYYGLGQVQLKLGDFRSALTNF 320
           NLA + +S+G       Y   ++ + N+       F   Y   G  +  LGD + A+ +F
Sbjct: 272 NLALAAYSRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAIDDF 331

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
            +V+ I     +   A G +Y  LG  ++A     +A +I+P  AQA+ + G
Sbjct: 332 NQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRG 383


>gi|224534365|ref|ZP_03674943.1| TPR domain protein [Borrelia spielmanii A14S]
 gi|224514467|gb|EEF84783.1| TPR domain protein [Borrelia spielmanii A14S]
          Length = 379

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRSLDDYKKATDIWEEYLKFDPENITVLTRVAS--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENAQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|218783089|ref|YP_002434407.1| hypothetical protein Dalk_5269 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218764473|gb|ACL06939.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 816

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 167/385 (43%), Gaps = 52/385 (13%)

Query: 83  PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG----------- 131
           P  W   G   +AK    +A +AF+  LE D  +  AL   AC + + G           
Sbjct: 425 PRPWYNLGNAYMAKRMYTEAVTAFEKTLELDPGDPDALNNLACAQVSLGLLDEATANVRE 484

Query: 132 -----------------------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
                                  R S+++ +Y  A+ + P  P A +  +G   YK+G  
Sbjct: 485 ALKTDPNSAVAYYNLGNAMAKSNRLSEAVMYYDMAVGLKPDFPMA-QCNLGYLLYKMGNP 543

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
            KAR+    AL LDPEN  AL+   + ++ + E   + +     Q+A E+ P  +     
Sbjct: 544 EKARERLSIALALDPEN--ALIQTVMANVLSAEG-DLEEARVHYQKALELEPDQSQIHYA 600

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
             N     G+   V+Q  E   A   + P     + N+A +   +G Y +A  +Y  ++ 
Sbjct: 601 YGNLLSKLGE---VDQAEEQHRAALENDPEDPRFHANMANTLSRQGRYGEAMTHYHKAL- 656

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
           E+   +  I  +  +G      G    A ++F+  ++  PD       +G++  + G+ +
Sbjct: 657 ELEPGNAMI--HTNMGIALADQGKVDEAASHFKAAMKSQPDFAPAYYNMGYVLAKQGRHQ 714

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVL 406
           +A E   KA +I P   QA+ + G  L  + TG   +A ++     KKA E+ P   ++L
Sbjct: 715 EALEYFSKAVEIKPDYGQAYYEAGNSL--AHTGHLNEAVQS----YKKALEQEPDNPKIL 768

Query: 407 NNIGVIHFEKGEFESAHQSFKDALG 431
           +N+G+++ + GE E+A   F+ AL 
Sbjct: 769 HNLGIVYAQGGELETAVDYFEKALA 793



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 141/343 (41%), Gaps = 27/343 (7%)

Query: 26  IDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 85
           +DE  A+VR       N+   YY  LG    K     E    A  YY+ A  +    P  
Sbjct: 475 LDEATANVREALKTDPNSAVAYYN-LGNAMAKSNRLSE----AVMYYDMAVGLKPDFPMA 529

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
               G LL   G  E+A     I L  D +N       A V    G   ++   Y++AL+
Sbjct: 530 QCNLGYLLYKMGNPEKARERLSIALALDPENALIQTVMANVLSAEGDLEEARVHYQKALE 589

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 205
           + P     I    G    KLG++ +A +  + AL+ DPE+             AN A  +
Sbjct: 590 LEPD-QSQIHYAYGNLLSKLGEVDQAEEQHRAALENDPEDPR---------FHANMANTL 639

Query: 206 -RKG-----MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
            R+G     M    +A E+ P  AM    +       G+   V++      A     P  
Sbjct: 640 SRQGRYGEAMTHYHKALELEPGNAMIHTNMGIALADQGK---VDEAASHFKAAMKSQPDF 696

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           + +YYN+      +G +++A L Y +   EI KP ++   YY  G      G    A+ +
Sbjct: 697 APAYYNMGYVLAKQGRHQEA-LEYFSKAVEI-KP-DYGQAYYEAGNSLAHTGHLNEAVQS 753

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           ++K LE  PDN + L  LG +Y Q G++E A +   KA  + P
Sbjct: 754 YKKALEQEPDNPKILHNLGIVYAQGGELETAVDYFEKALALQP 796



 Score = 47.4 bits (111), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 135/315 (42%), Gaps = 38/315 (12%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ-------AFQRALQ 180
           F    + + ++ + RALQ  P  P           Y LG    A++       AF++ L+
Sbjct: 402 FQNSLWREPVKLWTRALQYVPDSPRP--------WYNLGNAYMAKRMYTEAVTAFEKTLE 453

Query: 181 LDPENVEALVALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           LDP + +AL  LA     A  + G+  +    ++ A +  P  A+A   L N    + + 
Sbjct: 454 LDPGDPDALNNLAC----AQVSLGLLDEATANVREALKTDPNSAVAYYNLGNAMAKSNR- 508

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG--LYYMASVKEINKPHEFI 297
            L E +    +AV    P    +  NL    +  G+ EKA   L    ++   N   + +
Sbjct: 509 -LSEAVMYYDMAV-GLKPDFPMAQCNLGYLLYKMGNPEKARERLSIALALDPENALIQTV 566

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
                +  V    GD   A  +++K LE+ PD  +   A G++  +LG++++A+E  R A
Sbjct: 567 -----MANVLSAEGDLEEARVHYQKALELEPDQSQIHYAYGNLLSKLGEVDQAEEQHRAA 621

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFE 415
            + DP D +   ++   L  S  G     +  A T   KA E  P   +   N+G+   +
Sbjct: 622 LENDPEDPRFHANMANTL--SRQG----RYGEAMTHYHKALELEPGNAMIHTNMGIALAD 675

Query: 416 KGEFESAHQSFKDAL 430
           +G+ + A   FK A+
Sbjct: 676 QGKVDEAASHFKAAM 690


>gi|206890955|ref|YP_002249256.1| TPR domain protein, [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 542

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 203/473 (42%), Gaps = 71/473 (15%)

Query: 3   REYFKQGKVEQFRQILEEGSSPEIDE------YYADVRYERIAILNALGVYYTYLGKIET 56
           +E  K+    +F +I+   +  +IDE      Y  DV  E    ++AL V    L  +  
Sbjct: 36  KEALKENPQSKFLKIILADTYLKIDELETAKNYITDVLKEDTENIDALQV----LASVYV 91

Query: 57  KQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN 116
           K+++ +E    A + Y K  +   ++       G L L  G  ++A   FK +L+ D +N
Sbjct: 92  KEKKVKE----AIEVYEKILQQSPNKIEMLSKIGNLYLISGMYDKAIETFKKILKEDSEN 147

Query: 117 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 176
           + AL     +   +  +  + E +K  L+++P    A    +G      G L  A   F+
Sbjct: 148 IMALHFLGIIYIEKKDFKSARESFKTILKLNPDYEPAYT-NLGAVEELAGNLKDAELYFK 206

Query: 177 RALQLDPENV-----------------EALVALAVMDLQANEAAGIR------------- 206
           +AL+L+PEN+                 EA+  L  +  Q +E+  I              
Sbjct: 207 KALELNPENLFARERLINLYLSQKSYKEAIKELETLKEQKSESEQIHEKLALLYLQIKQY 266

Query: 207 -KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
            K  E+++     +P     + YL+  +  TG+    E L +  +++    P + +++ N
Sbjct: 267 DKATEELEYLLSKHPKDLNLMYYLSLIYIETGKLSEAEHLLKQIISI---NPKQVNAFLN 323

Query: 266 LARSY-HSKGDYEKAGLY-----YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           LA  Y   K   E   +Y     +   V EI         Y    +  + L D++ A   
Sbjct: 324 LATVYLKQKKLIEALNIYDEILQFAGDVPEI---------YIYATETAMDLKDYQRARQY 374

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
            E  L  +P+N +     G ++ +LG+ E+ ++L++K   + P  A+A   LG     +D
Sbjct: 375 IENALSRFPENPDVNFIAGVVFDKLGKFEETEKLMKKTLSLKPDHAEALNYLG--YSYAD 432

Query: 380 TGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 430
            G  L   K A +L++KA +  P     L+++G ++F+ G+ ++A Q   +A+
Sbjct: 433 RGINL---KEALSLIQKAVQLKPNNGYYLDSLGWVYFKLGDKKNALQYLLEAI 482



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 99/496 (19%), Positives = 184/496 (37%), Gaps = 115/496 (23%)

Query: 263 YYNLARSYHSK--GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
           Y+N    Y++   GD  KA ++Y  ++KE N   +F+     L    LK+ +  +A    
Sbjct: 13  YFNFMAGYYASINGDLNKAIVFYKEALKE-NPQSKFL--KIILADTYLKIDELETAKNYI 69

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
             VL+   +N + L+ L  +YV+  ++++A E+  K  +  P                  
Sbjct: 70  TDVLKEDTENIDALQVLASVYVKEKKVKEAIEVYEKILQQSPNK---------------- 113

Query: 381 GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD 440
                                 IE+L+ IG ++   G ++ A ++FK  L +       D
Sbjct: 114 ----------------------IEMLSKIGNLYLISGMYDKAIETFKKILKE-------D 144

Query: 441 SKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAAS 500
           S+                                     +  L  L  +  +  D  +A 
Sbjct: 145 SEN------------------------------------IMALHFLGIIYIEKKDFKSAR 168

Query: 501 VLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK 560
             ++ IL    DY  AY  L A+ +   NL+ +     +AL++N +   A   L +L L 
Sbjct: 169 ESFKTILKLNPDYEPAYTNLGAVEELAGNLKDAELYFKKALELNPENLFARERLINLYLS 228

Query: 561 NDDW---VKAKETFR-AASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAK 616
              +   +K  ET +   S++    +  A L L    Y                  +KA 
Sbjct: 229 QKSYKEAIKELETLKEQKSESEQIHEKLALLYLQIKQY------------------DKAT 270

Query: 617 ELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 676
           E    ++ +H  +L       ++  E G+   ++ L  Q+      S+  +  + ++NLA
Sbjct: 271 EELEYLLSKHPKDLNLMYYLSLIYIETGKLSEAEHLLKQII-----SINPKQVNAFLNLA 325

Query: 677 HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAP 736
            VY  Q     A+ +Y   L+  +     +I +Y   T  + + +Q  ++ +  A+   P
Sbjct: 326 TVYLKQKKLIEALNIYDEILQ--FAGDVPEIYIYATETAMDLKDYQRARQYIENALSRFP 383

Query: 737 SNYTLRFDAGVAMQKF 752
            N  + F AGV   K 
Sbjct: 384 ENPDVNFIAGVVFDKL 399



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 105/268 (39%), Gaps = 53/268 (19%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G++ +A    K ++  +   V A L  A V   + +  ++L  Y   LQ     P  I +
Sbjct: 298 GKLSEAEHLLKQIISINPKQVNAFLNLATVYLKQKKLIEALNIYDEILQFAGDVP-EIYI 356

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEA-LVALAVMDLQANEAAGIRKGMEK-MQR 214
                   L    +ARQ  + AL   PEN +   +A  V D       G  +  EK M++
Sbjct: 357 YATETAMDLKDYQRARQYIENALSRFPENPDVNFIAGVVFD-----KLGKFEETEKLMKK 411

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV---TNHGPTKSHSYYNLARSYH 271
              + P  A ALNYL   +   G + L E L+    AV    N+G               
Sbjct: 412 TLSLKPDHAEALNYLGYSYADRGIN-LKEALSLIQKAVQLKPNNG--------------- 455

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
                     YY+ S                LG V  KLGD ++AL    + ++   D+ 
Sbjct: 456 ----------YYLDS----------------LGWVYFKLGDKKNALQYLLEAIKYVKDDP 489

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAK 359
             L+ LG IY +LG  ++A +  ++A K
Sbjct: 490 VILEHLGDIYKELGNYKEALQTWQEAMK 517


>gi|343127514|ref|YP_004777445.1| hypothetical protein BbiDN127_0191 [Borrelia bissettii DN127]
 gi|342222202|gb|AEL18380.1| tetratricopeptide repeat family protein [Borrelia bissettii DN127]
          Length = 379

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            D G   +A    ++L+K
Sbjct: 308 KDQGKYEEALIAIKSLIK 325


>gi|406982865|gb|EKE04132.1| hypothetical protein ACD_20C00104G0026 [uncultured bacterium]
          Length = 356

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 146/340 (42%), Gaps = 58/340 (17%)

Query: 53  KIETKQREKEEHFILAT------------QYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 100
           KI+      E +F+L T            + Y +   ID       V  G  L   G+V+
Sbjct: 18  KIQETPDNVEAYFVLGTTLALSGKLEESLKTYRELLSIDSVNVQALVNIGSTLFLMGKVD 77

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
           +A   +K  +E + ++V A +  A      G+Y +++E YK+++++ P    A    +GL
Sbjct: 78  EAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKSIEISPDNIDAYS-SLGL 136

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
               L +  +A + ++ AL+LDPEN E  V +A + +Q  +           + A E Y 
Sbjct: 137 AFQDLRKYDEAMENYRSALKLDPENYEHYVNVASVYMQKTQ----------FEDAIEFYK 186

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP-TKSHSYYNLARSYHSKGDYEKA 279
               A+N+  N +         + L   A A++      KS  YY  A +   K DY KA
Sbjct: 187 ---KAVNFNNNDY---------KSLICIANALSELKKYNKSFEYYQKALA--VKPDYAKA 232

Query: 280 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
            L Y  S+ E                     G+ + A+  + KV+E+ P N      L +
Sbjct: 233 HLCYGISLSE--------------------SGNIKKAIEEYRKVIELDPTNSRGYMILAN 272

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
           I V+ G  ++A +  +KA ++D  +  A++ +G   + +D
Sbjct: 273 ILVEEGLYDEAVDNYKKAIELDNTNVLAYVAIGNTFVLTD 312



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 9/209 (4%)

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
           +L K  +  ++ +Q  P+NVEA   L         +  + + ++  +    I      AL
Sbjct: 7   ELNKVIEGARKKIQETPDNVEAYFVLGT---TLALSGKLEESLKTYRELLSIDSVNVQAL 63

Query: 227 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
             + +  F  G+   V++  +         P    +Y NLA +Y   G Y++A   Y  S
Sbjct: 64  VNIGSTLFLMGK---VDEAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKS 120

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
           + EI+  +  I  Y  LG     L  +  A+ N+   L++ P+N E    +  +Y+Q  Q
Sbjct: 121 I-EISPDN--IDAYSSLGLAFQDLRKYDEAMENYRSALKLDPENYEHYVNVASVYMQKTQ 177

Query: 347 IEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            E A E  +KA   +  D ++ I +   L
Sbjct: 178 FEDAIEFYKKAVNFNNNDYKSLICIANAL 206



 Score = 39.7 bits (91), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 2/139 (1%)

Query: 70  QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 129
           +YY KA  +        +  G  L   G +++A   ++ V+E D  N    +  A +   
Sbjct: 217 EYYQKALAVKPDYAKAHLCYGISLSESGNIKKAIEEYRKVIELDPTNSRGYMILANILVE 276

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
            G Y ++++ YK+A+++  +   A  + IG       +L +A + +++A Q+DP+N E  
Sbjct: 277 EGLYDEAVDNYKKAIELDNTNVLA-YVAIGNTFVLTDKLEEALKYYRQASQIDPDNDEIY 335

Query: 190 VALA-VMDLQANEAAGIRK 207
           +  A  +D  A+++  I K
Sbjct: 336 MIYADAVDEYASKSNNIMK 354


>gi|225621426|ref|YP_002722685.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225216247|gb|ACN84981.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae
           WA1]
          Length = 817

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 137/680 (20%), Positives = 254/680 (37%), Gaps = 119/680 (17%)

Query: 84  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           + +  +G   L  G  E+A   FK VL+ + ++  + +          +Y +++  Y   
Sbjct: 74  TVYYDRGLAKLYLGNYEEAIEDFKRVLKINNNDTDSRVNIGLCYLYMKKYKEAINIYDEV 133

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 203
           +   P    +     GLC++ L Q  +A   F + ++LD  +  +          A    
Sbjct: 134 IANFPDNISSYN-NRGLCKFYLSQFEEAINDFNKVIELDKNDTSS---------SAYNTI 183

Query: 204 GIRK-GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
           G+ K  + +   A + Y                           E A+ +    P    +
Sbjct: 184 GLCKYNLNEFDEALKCY---------------------------EKAIEI---NPNLISA 213

Query: 263 YYNLARSYHSKG-DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           Y N+A   HS G DYE   L Y+    EI+ P+  I  Y  +  ++L+LG    A     
Sbjct: 214 YNNIALIKHSVGLDYE--ALSYLNKALEID-PNN-IETYLKIYSIKLELGLENEANEYLN 269

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL------ 375
           K++E++PD+      +G+I +  G +E++ E L+KA +I+P    A+ D+   L      
Sbjct: 270 KIIEMHPDDIYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLN 329

Query: 376 ---------------ISSDT-------GAALDAFKTARTLLKKAGE--EVPIEVLNNIGV 411
                           S+DT         AL  ++ A + L K  E     + + N I +
Sbjct: 330 NEALEYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVSIYNEIAL 389

Query: 412 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
           I  E   ++ A      A         LD  T    I  S  ++            N   
Sbjct: 390 IKIELELYDEALYYLNKA---------LDIDTNNAEIYNSIGLVYHYKKNYEEAIRNFNK 440

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
            +EL  +  +  +N+     ++HD   +   Y   L     Y  AY+ L  I     N +
Sbjct: 441 AIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYK 500

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD-ATDGKDSYATLSLG 590
            +I+   +AL++N  Y  A   +   E+  +D+  + E F  A +   D  + Y  + L 
Sbjct: 501 EAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGL- 559

Query: 591 NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 650
                            +A + +KA E Y +V+  + + + A       L+   +++ + 
Sbjct: 560 -------------IYSRQAVY-DKAIEYYNKVLEINPNKVNAYYNIAFSLSNMDKYEEAL 605

Query: 651 DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 710
           +++ +V     G+              VY+ +G        Y+  +R F       I++ 
Sbjct: 606 EIYDKVIRMYPGNF------------DVYYERGYTKYRASKYEEAVRDF------DIIIN 647

Query: 711 LARTHYEAEQWQDCKKSLLR 730
           +   HY A  ++ C K  L+
Sbjct: 648 VNSKHYNAYYYRGCSKKYLK 667



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 164/391 (41%), Gaps = 44/391 (11%)

Query: 68  ATQYYNKASRIDMHEPSTWVGK--GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A +Y NK   I+MH    +V    G + +  G +E++    K  LE + + + A    A 
Sbjct: 264 ANEYLNKI--IEMHPDDIYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAF 321

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
                   +++LE+ ++ALQ++P+        + L +  L     A     + L++D  +
Sbjct: 322 ALHKLDLNNEALEYLEKALQIYPNSADT-YFKMFLVKRALRDYEGALSCLNKILEIDNTD 380

Query: 186 VEAL--VALAVMDLQANEAA--GIRKGMEKMQRAFEIYPYCAMALNY------------- 228
           V     +AL  ++L+  + A   + K ++      EIY    +  +Y             
Sbjct: 381 VSIYNEIALIKIELELYDEALYYLNKALDIDTNNAEIYNSIGLVYHYKKNYEEAIRNFNK 440

Query: 229 -------LANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYE 277
                  +A+ ++  G  +      E ++   N      P  + +Y NL    H+ G+Y+
Sbjct: 441 AIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYK 500

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A  YY  ++ EIN  +     YY +   ++ L D++++L +F K LE+  D  E    +
Sbjct: 501 EAIDYYKKAL-EINPDYS--LAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINI 557

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 397
           G IY +    +KA E   K  +I+P    A+ ++   L      + +D ++ A  +  K 
Sbjct: 558 GLIYSRQAVYDKAIEYYNKVLEINPNKVNAYYNIAFSL------SNMDKYEEALEIYDKV 611

Query: 398 GEEVP--IEVLNNIGVIHFEKGEFESAHQSF 426
               P   +V    G   +   ++E A + F
Sbjct: 612 IRMYPGNFDVYYERGYTKYRASKYEEAVRDF 642



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 18/263 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  Y NKA  ID +    +   G +   K   E+A   F   +E +     A        
Sbjct: 400 ALYYLNKALDIDTNNAEIYNSIGLVYHYKKNYEEAIRNFNKAIELNTSMASAYYNIGLAY 459

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           +    Y +S+++Y +AL+++P    A  + +GL ++ LG   +A   +++AL+++P+   
Sbjct: 460 YEMHDYENSIQYYNKALEINPQYASA-YINLGLIKHNLGNYKEAIDYYKKALEINPDYSL 518

Query: 188 AL--VALAVMDLQ--ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           A   +ALA M L+   N      K +E      EIY           N      +  + +
Sbjct: 519 AYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIY----------INIGLIYSRQAVYD 568

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           +  E    V    P K ++YYN+A S  +   YE+A   Y   ++    P  F   YY  
Sbjct: 569 KAIEYYNKVLEINPNKVNAYYNIAFSLSNMDKYEEALEIYDKVIRMY--PGNFD-VYYER 625

Query: 304 GQVQLKLGDFRSALTNFEKVLEI 326
           G  + +   +  A+ +F+ ++ +
Sbjct: 626 GYTKYRASKYEEAVRDFDIIINV 648



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 132/330 (40%), Gaps = 21/330 (6%)

Query: 40  ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 99
           I N++G+ Y Y       ++  EE    A + +NKA  ++    S +   G       + 
Sbjct: 417 IYNSIGLVYHY-------KKNYEE----AIRNFNKAIELNTSMASAYYNIGLAYYEMHDY 465

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
           E +   +   LE +     A +    ++ N G Y +++++YK+AL+++P    A    I 
Sbjct: 466 ENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLA-YYNIA 524

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
           L    L     + + F +AL+L  +  E  + + ++    +  A   K +E   +  EI 
Sbjct: 525 LAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLI---YSRQAVYDKAIEYYNKVLEIN 581

Query: 220 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           P     +N   N  F        E+  E    V    P     YY    + +    YE+A
Sbjct: 582 P---NKVNAYYNIAFSLSNMDKYEEALEIYDKVIRMYPGNFDVYYERGYTKYRASKYEEA 638

Query: 280 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
            +     +  +N  H   + Y G  +  LK  ++  A+ +F+K +E   +N +       
Sbjct: 639 -VRDFDIIINVNSKHYNAYYYRGCSKKYLK--NYDGAIKDFDKAIEYNANNSDFYSERAS 695

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
            Y  L +  ++ E   KA ++   D   +I
Sbjct: 696 CYDYLNKYRESVENYDKAIELKDDDWFLYI 725



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 143/349 (40%), Gaps = 56/349 (16%)

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 114
           E K+ EK   +I    +YN  S    H  +  + K  L L     E+A   F+  +E   
Sbjct: 17  ENKEYEKSIEYIDKVIFYNGDSYDLYH--NRGLSKLNLRL----YEEAIKDFERAIELGD 70

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
           D+      +   +   G Y +++E +KR L+++ +   + R+ IGLC   + +  +A   
Sbjct: 71  DSETVYYDRGLAKLYLGNYEEAIEDFKRVLKINNNDTDS-RVNIGLCYLYMKKYKEAINI 129

Query: 175 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           +   +   P+N+               ++   +G+ K                      F
Sbjct: 130 YDEVIANFPDNI---------------SSYNNRGLCK----------------------F 152

Query: 235 FTGQHFLVEQLTETALAV-TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
           +  Q    E + +    +  +   T S +Y  +    ++  ++++A   Y  ++ EIN P
Sbjct: 153 YLSQ--FEEAINDFNKVIELDKNDTSSSAYNTIGLCKYNLNEFDEALKCYEKAI-EIN-P 208

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
           +  I  Y  +  ++  +G    AL+   K LEI P+N ET   +  I ++LG   +A E 
Sbjct: 209 N-LISAYNNIALIKHSVGLDYEALSYLNKALEIDPNNIETYLKIYSIKLELGLENEANEY 267

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 402
           L K  ++ P D   +  +G + I  D G   ++ +     LKKA E  P
Sbjct: 268 LNKIIEMHPDDIYVYDRIGNIKI--DAGYMEESLEY----LKKALEINP 310


>gi|147919209|ref|YP_687056.1| hypothetical protein RCIX2685 [Methanocella arvoryzae MRE50]
 gi|110622452|emb|CAJ37730.1| hypothetical protein RCIX2685 [Methanocella arvoryzae MRE50]
          Length = 365

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 46/336 (13%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YNK    D + P   V  G +    G+ + A + F   L+   D   A  G ACV+   G
Sbjct: 5   YNKKEIEDRNSPEGLVASGNVYAMSGQYDNALAHFHKALKLKPDCTDAYYGLACVQCATG 64

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
              ++ + +K AL++    PGA    +G   Y LG+L +A    QR+L++DP+   A   
Sbjct: 65  NLEEAEKSFKDALRIDDKHPGA-HSDLGNLYYCLGRLDEALAELQRSLEIDPQQHLAHYR 123

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
           L ++ L+ +      + +E++++   + P  A A   L   +   G+        + A+A
Sbjct: 124 LGLVYLRMDRD---DEAIEELKKTISLKPSYADAYTALGRTYGLQGR-------LDEAIA 173

Query: 252 VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK---EINKPH---------- 294
              H     P  +  +++L  +   KGD + A   +  +++   E   PH          
Sbjct: 174 AFRHAIAEKPQDAVCHFDLGLALSMKGDLDPANTEFAEAIRLDPEFPDPHMAMGSNLFTD 233

Query: 295 --------EF-----IFPY-----YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
                   EF     + PY       L QV  + G    A+  + + L + P   E   +
Sbjct: 234 GKLNEAAFEFREAIRLNPYLEEAHLKLAQVYEQKGLMGEAVKEYREALAVQPGMYEANLS 293

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           LG +++ LG+ E+A   L  AA+  P  A A+++LG
Sbjct: 294 LGRVHMTLGRYEEAIRELASAAEARPESAIAYLELG 329



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
           +GR  +++  ++ A+   P         +GL     G L  A   F  A++LDPE  +  
Sbjct: 165 QGRLDEAIAAFRHAIAEKPQ-DAVCHFDLGLALSMKGDLDPANTEFAEAIRLDPEFPDPH 223

Query: 190 VALA---VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
           +A+      D + NEAA       + + A  + PY   A   LA  +   G   + E + 
Sbjct: 224 MAMGSNLFTDGKLNEAAF------EFREAIRLNPYLEEAHLKLAQVYEQKG--LMGEAVK 275

Query: 247 E--TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
           E   ALAV    P    +  +L R + + G YE+A +  +AS  E  +P   I  Y  LG
Sbjct: 276 EYREALAVQ---PGMYEANLSLGRVHMTLGRYEEA-IRELASAAEA-RPESAI-AYLELG 329

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
               KLG  + A  N+EK L++ P     +KA+
Sbjct: 330 NAFSKLGFEKEAKQNYEKALKLDPSLESAIKAV 362



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
           Y   G Y+ A  ++  ++K   KP +    YYGL  VQ   G+   A  +F+  L I   
Sbjct: 26  YAMSGQYDNALAHFHKALK--LKP-DCTDAYYGLACVQCATGNLEEAEKSFKDALRIDDK 82

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
           +      LG++Y  LG++++A   L+++ +IDP+   A   LG + +  D
Sbjct: 83  HPGAHSDLGNLYYCLGRLDEALAELQRSLEIDPQQHLAHYRLGLVYLRMD 132



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G V    G + +AL +F K L++ PD  +    L  +    G +E+A++  + A +ID +
Sbjct: 23  GNVYAMSGQYDNALAHFHKALKLKPDCTDAYYGLACVQCATGNLEEAEKSFKDALRIDDK 82

Query: 364 DAQAFIDLGEL 374
              A  DLG L
Sbjct: 83  HPGAHSDLGNL 93


>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1075

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 10/276 (3%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G ++ A +AF+  LE D     A  G      + GR S+++  +++AL++ P    A   
Sbjct: 196 GNLKGAIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEAIAAFEKALEIDPKEHIAWH- 254

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
           G+G+    LG+  +A  AF++AL++DP+   A   L +     N      + +   ++A 
Sbjct: 255 GLGITLNALGRNSEAIAAFEKALEIDPKEHIAWHGLGIT---LNALGRNSEAIAAFEKAL 311

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           EI P   +A   L N     G++       + AL +    P   H++  L    +  G Y
Sbjct: 312 EIDPKAHIAWKGLGNALNALGRNSEAIAAFKKALEID---PKFHHAWNGLGAPLNDLGRY 368

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            +A     A  K +    +F F ++GLG V   LG +  A+  +EK LEI P        
Sbjct: 369 SEA---IAAFEKALEIDPKFHFAWHGLGNVLNALGRYSEAIAVYEKALEIDPKFHFAWNG 425

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           LG+   +LG+  +A     KA +IDP+   A+  LG
Sbjct: 426 LGNALGELGRYSEAIAAYEKALEIDPKFHIAWNGLG 461



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 10/293 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   + KA  ID      W G G  L   G   +A +AF+  LE D     A  G     
Sbjct: 201 AIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEAIAAFEKALEIDPKEHIAWHGLGITL 260

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GR S+++  +++AL++ P    A   G+G+    LG+  +A  AF++AL++DP   +
Sbjct: 261 NALGRNSEAIAAFEKALEIDPKEHIAWH-GLGITLNALGRNSEAIAAFEKALEIDP---K 316

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A +A   +    N      + +   ++A EI P    A N L       G++       E
Sbjct: 317 AHIAWKGLGNALNALGRNSEAIAAFKKALEIDPKFHHAWNGLGAPLNDLGRYSEAIAAFE 376

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            AL +    P    +++ L    ++ G Y +A   Y  ++ EI+   +F F + GLG   
Sbjct: 377 KALEID---PKFHFAWHGLGNVLNALGRYSEAIAVYEKAL-EIDP--KFHFAWNGLGNAL 430

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            +LG +  A+  +EK LEI P        LG     LG+  +A     KA +I
Sbjct: 431 GELGRYSEAIAAYEKALEIDPKFHIAWNGLGSARRGLGRNSEAIAAFDKALEI 483



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 118/276 (42%), Gaps = 21/276 (7%)

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANEAAGIRKGMEKMQRAF 216
           G+ RY  G L  A  AF++AL++DP+   A   L   + DL  N  A     +   ++A 
Sbjct: 189 GVERYYAGNLKGAIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEA-----IAAFEKAL 243

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           EI P   +A + L       G++       E AL +    P +  +++ L  + ++ G  
Sbjct: 244 EIDPKEHIAWHGLGITLNALGRNSEAIAAFEKALEID---PKEHIAWHGLGITLNALGRN 300

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            +A   +  +++   K H     + GLG     LG    A+  F+K LEI P        
Sbjct: 301 SEAIAAFEKALEIDPKAH---IAWKGLGNALNALGRNSEAIAAFKKALEIDPKFHHAWNG 357

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 396
           LG     LG+  +A     KA +IDP+   A+  LG +L       AL  +  A  + +K
Sbjct: 358 LGAPLNDLGRYSEAIAAFEKALEIDPKFHFAWHGLGNVL------NALGRYSEAIAVYEK 411

Query: 397 AGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A E  P      N +G    E G +  A  +++ AL
Sbjct: 412 ALEIDPKFHFAWNGLGNALGELGRYSEAIAAYEKAL 447


>gi|390949283|ref|YP_006413042.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiocystis violascens DSM 198]
 gi|390425852|gb|AFL72917.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiocystis violascens DSM 198]
          Length = 972

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 152/360 (42%), Gaps = 59/360 (16%)

Query: 39  AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE 98
           A+LN+LG  +  LG+++            A  +Y +A RI          +G  LL+ G 
Sbjct: 190 AVLNSLGNAFKILGRLDD-----------ALDHYTRALRISPRFAEAHNNRGGTLLSLGH 238

Query: 99  VEQASSAFK--IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           +E+A ++ +  I L+AD       LGQ   E  +GR+ +++  Y++A  ++P   G ++ 
Sbjct: 239 LEEALTSLRDAIALKADFAEAHHNLGQVLAE--QGRFDEAVASYRQAGLLNPDLAG-LQH 295

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQ 213
            +GL  Y+LG+L +A  +   A + +P+         V+  Q N   E     +  +  +
Sbjct: 296 SLGLAFYRLGRLDEALASLSLAARSEPDQA------GVLSDQGNILRELGRFEEARDSYR 349

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
           RA  I P  A+A   L N     G    +++  E   A     P  +  Y N        
Sbjct: 350 RALAIDPANALAHTNLGNLLRELGH---LDEALEHHAAALRIAPDYAEGYCNAGLVLQDL 406

Query: 274 GDYEKAGLYYMASV-----------------KEINKPHE--------------FIFPYYG 302
           G  E+A  +Y  ++                 +E+ + HE              F   +  
Sbjct: 407 GRLEEARAHYSQALSINPNLAQAHGNLGNYWQELKRCHEALECYRRALAIEPRFAEAHNN 466

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           +G V L+ G+F  A   FE+ L I PD  +    LG  + ++G+ +KA +   +A +I P
Sbjct: 467 MGLVLLEQGNFDEARERFEQALSIRPDYVDAYLNLGTCHGRVGRYDKALDCFDRALRISP 526



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 169/407 (41%), Gaps = 35/407 (8%)

Query: 38  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
           +AI    G  Y+YLG IE  +   +   I       +A   + H  + W+ + + LL   
Sbjct: 35  LAIDAGTGDAYSYLGLIEIARGRNDAAIINLRLALERAP--ERH--ANWLSQVETLLEPS 90

Query: 98  EVEQA-----------SSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
             E+A           S++  +   + R + PA        F RGR +++    +R    
Sbjct: 91  RHEEARLAMDRARSHDSNSAAVRPRSPRTSSPAERDALVALFGRGRLNEAQASARRLATR 150

Query: 147 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-I 205
           +P      ++ +G+   + GQ   A+   +RAL LDP++   L +L      A +  G +
Sbjct: 151 YPDDAFGWKV-LGIVLLECGQARDAQVQLERALDLDPKDAAVLNSLG----NAFKILGRL 205

Query: 206 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
              ++   RA  I P  A A N         G   L E LT    A+       + +++N
Sbjct: 206 DDALDHYTRALRISPRFAEAHNNRGGTLLSLGH--LEEALTSLRDAIALKA-DFAEAHHN 262

Query: 266 LARSYHSKGDYEKAGLYYMASVKEIN--KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           L +    +G +++A    +AS ++     P +     + LG    +LG    AL +    
Sbjct: 263 LGQVLAEQGRFDEA----VASYRQAGLLNP-DLAGLQHSLGLAFYRLGRLDEALASLSLA 317

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 383
               PD    L   G+I  +LG+ E+A++  R+A  IDP +A A  +LG LL   + G  
Sbjct: 318 ARSEPDQAGVLSDQGNILRELGRFEEARDSYRRALAIDPANALAHTNLGNLL--RELGHL 375

Query: 384 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +A +     L+ A +    E   N G++  + G  E A   +  AL
Sbjct: 376 DEALEHHAAALRIAPDYA--EGYCNAGLVLQDLGRLEEARAHYSQAL 420


>gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
 gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
          Length = 545

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 41/387 (10%)

Query: 65  FILATQYYNKAS------------RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA 112
             LA +Y NK                D   P  +   G++ LAKG++++    F   LE 
Sbjct: 121 LFLANEYINKGKLREAEKVLLEYMETDPDNPLPYYLLGRIYLAKGDIQKGMEYFLKALEK 180

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
            +   PA+L    +     ++ ++ E YK  L+ +P+ P  +   +       G++ +A 
Sbjct: 181 KKYYAPAVLSLGNLYLQEKKFKEAEELYKSVLEKYPNSPKILE-KLAKLYTASGRIEEAI 239

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 232
           + +++ + L P NV      A++ L   E    +K +E++       P  A A    A  
Sbjct: 240 KIYEKLINLKPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPSNPNVAFA---YALT 296

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
              TG+    +++ E  L   N  P        L   Y   G+YE A        K + +
Sbjct: 297 LEATGELKKAKEIYENLL---NRFPENIKVIERLIGIYLDLGNYEDA--------KRLIE 345

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI-------YPDNCETLKALGHIYVQLG 345
             + + P     ++     D+ S    ++K LEI       YP++         +Y  LG
Sbjct: 346 KAKVLAP--DKKEILFLEADYYSKTKQYDKALEILKKLEKDYPNDSRVYFMEAIVYDNLG 403

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--I 403
            I+ A++ LRKA ++DP +   +  LG  L+        +  + A  L+KKA E+ P   
Sbjct: 404 DIKNAEKALRKAIELDPENPDYYNYLGYSLL---LWYGKERVEEAEELIKKALEKDPENP 460

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDAL 430
             ++++G +++ KG++E A Q    AL
Sbjct: 461 AYIDSMGWVYYLKGDYERAMQYLLKAL 487



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 9/209 (4%)

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
           KA++  +  L+  P+  +A + L  +     E    +K  E ++ A++ +P+    + +L
Sbjct: 67  KAKELAKEFLETYPDEPQAYIYLYTIYKFLKED---KKAFEVIKEAYKSFPFNENVVLFL 123

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
           AN +   G+   + +  +  L      P     YY L R Y +KGD +K   Y++   K 
Sbjct: 124 ANEYINKGK---LREAEKVLLEYMETDPDNPLPYYLLGRIYLAKGDIQKGMEYFL---KA 177

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
           + K   +      LG + L+   F+ A   ++ VLE YP++ + L+ L  +Y   G+IE+
Sbjct: 178 LEKKKYYAPAVLSLGNLYLQEKKFKEAEELYKSVLEKYPNSPKILEKLAKLYTASGRIEE 237

Query: 350 AQELLRKAAKIDPRDAQAFIDLGELLISS 378
           A ++  K   + PR+     +   LL+S+
Sbjct: 238 AIKIYEKLINLKPRNVNYKTEYALLLLST 266



 Score = 39.7 bits (91), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 124/301 (41%), Gaps = 11/301 (3%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           +E+ F  A + Y        + P       +L  A G +E+A   ++ ++     NV   
Sbjct: 197 QEKKFKEAEELYKSVLEKYPNSPKILEKLAKLYTASGRIEEAIKIYEKLINLKPRNVNYK 256

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
              A +  + G +  + +  +    V+PS P  +     L     G+L KA++ ++  L 
Sbjct: 257 TEYALLLLSTGEFDKAKKILEELYYVNPSNPN-VAFAYALTLEATGELKKAKEIYENLLN 315

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
             PEN++ +  L  + L        ++ +EK +    + P     L   A+++  T Q+ 
Sbjct: 316 RFPENIKVIERLIGIYLDLGNYEDAKRLIEKAKV---LAPDKKEILFLEADYYSKTKQY- 371

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
             ++  E    +    P  S  Y+  A  Y + GD + A      ++ E++  +   + Y
Sbjct: 372 --DKALEILKKLEKDYPNDSRVYFMEAIVYDNLGDIKNAEKALRKAI-ELDPENPDYYNY 428

Query: 301 YGLGQVQLKLGDFR--SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            G   + L  G  R   A    +K LE  P+N   + ++G +Y   G  E+A + L KA 
Sbjct: 429 LGYSLL-LWYGKERVEEAEELIKKALEKDPENPAYIDSMGWVYYLKGDYERAMQYLLKAL 487

Query: 359 K 359
           +
Sbjct: 488 R 488


>gi|116753411|ref|YP_842529.1| TPR repeat-containing protein [Methanosaeta thermophila PT]
 gi|116664862|gb|ABK13889.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila
           PT]
          Length = 366

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 135/323 (41%), Gaps = 25/323 (7%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A +YY++   ID    + W G+G         E A   +   +EAD + VPA   +A V 
Sbjct: 23  AIEYYDRVLDIDPMNTAAWCGRGMACFCFSRYEDALECYSRAIEADPECVPAWECRAEVL 82

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGI-------------GLCRYKLGQLGKARQ 173
           F  GR  +++  Y+ A+   P+   A I   I             GL    +G+  +A +
Sbjct: 83  FILGRCDEAISSYQEAIDRDPAYALAWIERCIDSRPDDAESWRQKGLALLSMGRYEEAIE 142

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAMALNYLANH 232
           A++ AL +DP        L     ++ +  G   + +E  +RA E+ P  +     +   
Sbjct: 143 AYRMALDIDPSQARDWCILG----ESLQTIGRHSEALECFERALELSPSDSACWIRMGES 198

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
              TG++    +  E AL +    P    +++    +Y + G   KA +  + S   ++ 
Sbjct: 199 MHSTGRYDEALECYEEALRLD---PGSVQAWHGKGITYRAMGIPSKA-IDAIDSALTLDP 254

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
            H     +Y  G     +G +  AL  F++VL I P N   LK+       LG+  +A  
Sbjct: 255 EHA--QSWYAKGITFRAMGLYEDALECFDRVLRIDPGNASALKSRAWSLYNLGRYAEALS 312

Query: 353 LLRKAAKIDPRDAQAFIDLGELL 375
               A  ++P D  A+ ++G +L
Sbjct: 313 ACEGAISVNPLDEDAWYNMGIVL 335


>gi|111115017|ref|YP_709635.1| hypothetical protein BAPKO_0197 [Borrelia afzelii PKo]
 gi|384206693|ref|YP_005592414.1| hypothetical protein BafPKo_0191 [Borrelia afzelii PKo]
 gi|110890291|gb|ABH01459.1| conserved hypothetical protein [Borrelia afzelii PKo]
 gi|342856576|gb|AEL69424.1| tetratricopeptide repeat family protein [Borrelia afzelii PKo]
          Length = 379

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSNILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLIKHPNNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAS--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAIFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENAQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
 gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
          Length = 463

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 155/369 (42%), Gaps = 18/369 (4%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+ A  +D      W  KG  L A G  E+A + +   LE D D  PA   +  V 
Sbjct: 51  AVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLEIDPDYAPAWNNRGVVL 110

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GR  ++LE Y RAL+V P+   A     G   Y  G   ++ + ++RAL++DP + E
Sbjct: 111 EALGRGDEALESYDRALEVDPAYALAWS-NQGGVFYSRGDYNRSIECYERALEIDPRSRE 169

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A   L      A E     + +E    A +I P  A A N         G+H       E
Sbjct: 170 AWNNLGRSLFAAGE---YERSIEGYDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYE 226

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            AL +    P+   + YN   +    G  E+A   Y A +K       +   +Y  G   
Sbjct: 227 EALKIE---PSHVMALYNKGIALGLLGRQEEAVECYDAVLK---VDPSYPPAWYNRGVAL 280

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             LG    A  ++++ L++ P   +     G     LG+ E+A +  ++A +IDP  +QA
Sbjct: 281 GLLGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPAYSQA 340

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQS 425
           + + G         +AL  ++ A +   +A E  P   E  NN G+     G  + A + 
Sbjct: 341 WYNQGVAF------SALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIEC 394

Query: 426 FKDALGDGI 434
           ++ AL  G+
Sbjct: 395 YERALEVGL 403


>gi|308810278|ref|XP_003082448.1| SPINDLY protein (ISS) [Ostreococcus tauri]
 gi|116060916|emb|CAL57394.1| SPINDLY protein (ISS) [Ostreococcus tauri]
          Length = 946

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 149/378 (39%), Gaps = 57/378 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKI-------------VLEADR 114
           A + +  A   D   P  W G G+L  A G  ++A+  ++                EAD+
Sbjct: 105 AYERFRAACGDDDGRPEAWCGLGRLAHASGAYDEATKCYRRGRDRFKELGAMDEAREADQ 164

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
               A           G    +L  Y+  +   P C  A    +G+   + GQL +A  A
Sbjct: 165 TLAAAWTDLGTTHKAAGDVERALATYRAVIAELPWCAAAAYYNLGVSLVECGQLVEAEHA 224

Query: 175 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           ++R++ +DP   EA   + V          + K M +M  A E Y +C      LA  F 
Sbjct: 225 YRRSIAVDPTRAEAYCNIGV----------VFKMMSRMDEAVEAYEHCLR----LAPDFE 270

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK-GDYEKAGLYYMASVKEINKP 293
              ++         +L +T+ G     + + +  S  +    YE+A  Y   +V+     
Sbjct: 271 LGRKNL--------SLVLTDQG-----TEFKMKNSLSAAMATYERALTYDSLNVEA---- 313

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
                 YY LG    +  ++  A+  +E    + P   E     G +Y + G  E+A E 
Sbjct: 314 ------YYNLGVACAEAEEYDRAIIAYETAGRLRPHYAEVWNNAGVLYKERGNDERAMEY 367

Query: 354 LRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 412
             +A   +P  AQ   +LG L  +S     ALDA + A T+     +       NNIGV+
Sbjct: 368 YHRAVACNPNFAQPLNNLGVLHTMSGQAQFALDALQRAVTV-----DPAYAVAHNNIGVL 422

Query: 413 HFEKGEFESAHQSFKDAL 430
             + G+ E A  ++++ +
Sbjct: 423 LRDTGDIEHACDAYRECV 440


>gi|406981036|gb|EKE02561.1| hypothetical protein ACD_20C00362G0010 [uncultured bacterium]
          Length = 630

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 159/369 (43%), Gaps = 24/369 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE--ADRDNVPALLGQAC 125
           A +Y  +A++   + P   +  GQ+ +     +++ +    +LE     D+   LL  A 
Sbjct: 93  AIEYLERAAQQVQNTPEILIQLGQMYIENQHYDKSINLINELLEKYPQLDDCYYLL--AL 150

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
                G    ++E Y++A++++     +  L +G+  Y   QL +A +  Q AL +D  N
Sbjct: 151 NHEKTGNIPQAIENYRKAIEINSRSHKS-YLALGILYYNQKQLDEANKELQNALSIDFNN 209

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
            +    L ++    N      K + + +      P    A N L   + F G  +L E +
Sbjct: 210 TKIHFYLGLI---YNAQENFEKAIAEFKYVVTFEPKNIEAYNNLGLAYGFLG--WLEEAI 264

Query: 246 TE--TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            E  TA+A+    P      Y L   Y  K +Y+ A +    +++ +   HE    Y  L
Sbjct: 265 QEFKTAIAL---NPDNPEVRYALGYIYFMKKNYQYAQIELQTAIR-LKPDHEL--SYLIL 318

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           GQV   L  F+ A+  + + L++ P+N  T   L      LG  EKA E  +K  +++P 
Sbjct: 319 GQVYAHLDRFKEAIDEYNEALKLNPNNPTTYYNLAFALNTLGMSEKATECYKKVIELNPA 378

Query: 364 DAQAFIDLGELLISS-DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
              A++DLG +L+S+     A + F+ A       G     E   ++G+ +    E++ A
Sbjct: 379 YLSAYLDLGNILLSNGQQDFAKECFEAAINRSSNFG-----EAYYSLGLCYIRSEEYQKA 433

Query: 423 HQSFKDALG 431
              F  A+ 
Sbjct: 434 LYCFDHAIA 442



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 149/365 (40%), Gaps = 37/365 (10%)

Query: 49  TYLGKIETKQREKEEHFILATQYYNK------------ASRIDMHEPSTWVGKGQLLLAK 96
            Y   IE   R  + +  L   YYN+            A  ID +        G +  A+
Sbjct: 164 NYRKAIEINSRSHKSYLALGILYYNQKQLDEANKELQNALSIDFNNTKIHFYLGLIYNAQ 223

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
              E+A + FK V+  +  N+ A           G   ++++ +K A+ ++P  P  +R 
Sbjct: 224 ENFEKAIAEFKYVVTFEPKNIEAYNNLGLAYGFLGWLEEAIQEFKTAIALNPDNP-EVRY 282

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G   +       A+   Q A++L P++  + + L  +    +     ++ +++   A 
Sbjct: 283 ALGYIYFMKKNYQYAQIELQTAIRLKPDHELSYLILGQVYAHLDR---FKEAIDEYNEAL 339

Query: 217 EIYPY-------CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           ++ P         A ALN L           + E+ TE    V    P    +Y +L   
Sbjct: 340 KLNPNNPTTYYNLAFALNTLG----------MSEKATECYKKVIELNPAYLSAYLDLGNI 389

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
             S G  + A   + A+   IN+   F   YY LG   ++  +++ AL  F+  + I P+
Sbjct: 390 LLSNGQQDFAKECFEAA---INRSSNFGEAYYSLGLCYIRSEEYQKALYCFDHAIAINPN 446

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFK 388
             +     G IY + G +E A E + +A K+D  +A ++ DLG    I  +   A+ AFK
Sbjct: 447 LSDAYYQKGLIYKKDGNMELAIENIEQAIKLDTENAASYNDLGLAYQILGNQEKAISAFK 506

Query: 389 TARTL 393
            A  L
Sbjct: 507 KASFL 511



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 130/614 (21%), Positives = 246/614 (40%), Gaps = 69/614 (11%)

Query: 115 DNVPALLGQACVEF-NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
           D  P +      EF N   Y  ++E+Y   L +  S    +   I  C + +    K+ +
Sbjct: 3   DKNPQIYLSKAEEFKNNKEYKTAIEYYSEILTLM-SEDFEVMEKIADCYFCINDFEKSME 61

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
            + ++LQ++   + +LV L+ +    N+     + +E+  +  +  P   + L       
Sbjct: 62  YYVKSLQINTNYINSLVGLSKVYEVINQLPEAIEYLERAAQQVQNTPEILIQLG----QM 117

Query: 234 FFTGQHF-----LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
           +   QH+     L+ +L E         P     YY LA ++   G+  +A   Y  +++
Sbjct: 118 YIENQHYDKSINLINELLEKY-------PQLDDCYYLLALNHEKTGNIPQAIENYRKAIE 170

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
             ++ H+    Y  LG +         A    +  L I  +N +    LG IY      E
Sbjct: 171 INSRSHK---SYLALGILYYNQKQLDEANKELQNALSIDFNNTKIHFYLGLIYNAQENFE 227

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEV 405
           KA    +     +P++ +A+ +LG  L     G    A+  FKTA  L      + P EV
Sbjct: 228 KAIAEFKYVVTFEPKNIEAYNNLG--LAYGFLGWLEEAIQEFKTAIAL----NPDNP-EV 280

Query: 406 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI--DASASMLQFKDMQLF 463
              +G I+F K  ++ A    + A+       L      +Y+I     A + +FK+    
Sbjct: 281 RYALGYIYFMKKNYQYAQIELQTAI------RLKPDHELSYLILGQVYAHLDRFKEA--- 331

Query: 464 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 523
              +     ++L  N  T  +NLA  L  +  +  A+  Y+ ++     Y+ AYL L  I
Sbjct: 332 --IDEYNEALKLNPNNPTTYYNLAFALNTLGMSEKATECYKKVIELNPAYLSAYLDLGNI 389

Query: 524 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKD 582
             +      + E    A+  +  +  A   LG   ++++++ KA   F  A +   +  D
Sbjct: 390 LLSNGQQDFAKECFEAAINRSSNFGEAYYSLGLCYIRSEEYQKALYCFDHAIAINPNLSD 449

Query: 583 SYATLSL---GNWNYFAALRNEKRAPKLEATHL----------------EKAKELYTRVI 623
           +Y    L    + N   A+ N ++A KL+  +                 EKA   + +  
Sbjct: 450 AYYQKGLIYKKDGNMELAIENIEQAIKLDTENAASYNDLGLAYQILGNQEKAISAFKKAS 509

Query: 624 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 683
                N    +  G+ L E  ++   K+   +++ A   S +    D++ NLA++Y   G
Sbjct: 510 FLDPDNSLYRHNLGIALFEGKRY---KESIVELRRAIRLSPY--NADIYFNLANIYEKIG 564

Query: 684 NFALAMKMYQNCLR 697
           ++A A+  Y+N ++
Sbjct: 565 DYADAVDSYENFVK 578


>gi|219684521|ref|ZP_03539464.1| TPR domain protein [Borrelia garinii PBr]
 gi|219685809|ref|ZP_03540618.1| TPR domain protein [Borrelia garinii Far04]
 gi|219671883|gb|EED28937.1| TPR domain protein [Borrelia garinii PBr]
 gi|219672642|gb|EED29672.1| TPR domain protein [Borrelia garinii Far04]
          Length = 379

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLDIVEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325


>gi|216263769|ref|ZP_03435763.1| TPR domain protein [Borrelia afzelii ACA-1]
 gi|215979813|gb|EEC20635.1| TPR domain protein [Borrelia afzelii ACA-1]
          Length = 379

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSNILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLIKHPNNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAS--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAIFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENAQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|51598455|ref|YP_072643.1| hypothetical protein BG0193 [Borrelia garinii PBi]
 gi|51573026|gb|AAU07051.1| conserved hypothetical protein [Borrelia garinii PBi]
          Length = 379

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELIPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLDIVEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325


>gi|268315734|ref|YP_003289453.1| hypothetical protein Rmar_0157 [Rhodothermus marinus DSM 4252]
 gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
          Length = 465

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 39/341 (11%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W+ +G LL   G  E+A  A++  L  +  +   L+       N GR+ ++L+ Y+RAL
Sbjct: 74  AWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQAYERAL 133

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           Q+ P     I   +G+   ++ +L +A QA + A +L+P++ E    L       +    
Sbjct: 134 QIDP-LNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFC---YDRLGD 189

Query: 205 IRKGMEKMQRAFEIYPYCA-------MALNYLANH--------FFFTGQHFLVEQLTETA 249
             + +    R  E+ PY A       + LN +  +        +    Q           
Sbjct: 190 DERSLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRG 249

Query: 250 LAVTNHGPTKS----------------HSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
            A+TN G  +                  +YYN+A +Y    +YE A  Y+  +++E    
Sbjct: 250 NALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAY 309

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
            E    +YGLG     L  F  A+   E+ + + P+  E   A         +++ A + 
Sbjct: 310 AE---AWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQS 366

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 393
            R+  ++DP++  A++D  E L+ +     AL A++ A TL
Sbjct: 367 YRRVIELDPQNRDAWLDYAETLLEAGYVEEALQAYRQALTL 407



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 153/366 (41%), Gaps = 61/366 (16%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
           + RGR+ D+L    R L +HP+   A +R GI L    LG+  +A QA++RAL L+P + 
Sbjct: 49  YERGRFEDALGVIDRLLALHPTASDAWMRRGILLS--HLGRHEEALQAYERALSLNPTDT 106

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQ 244
           E LV L +     +      + ++  +RA +I P        L +  ++     L  +++
Sbjct: 107 ETLVNLGIT---LDNLGRFEEALQAYERALQIDP--------LNDEIYYNLGITLERMDR 155

Query: 245 LTETALAVTNHG---PTKSHSYYNLARSYHSKGDYEKAGLYY------------------ 283
           L E   A+       P     +Y L   Y   GD E++   Y                  
Sbjct: 156 LEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRG 215

Query: 284 -----MASVKEINKPHEFIFP--------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
                M   +E  + +++           +Y  G     LGD R A+ ++EKVLEI   +
Sbjct: 216 IVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGD 275

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
             T   +   Y +L + E A +  + A + DP  A+A+  LG      D   AL+ F+ A
Sbjct: 276 PATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLG---CCYD---ALERFEEA 329

Query: 391 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 450
              +++A     + +        + K + E   +  +DAL     +  LD + +   +D 
Sbjct: 330 IACMERA-----VTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWLDY 384

Query: 451 SASMLQ 456
           + ++L+
Sbjct: 385 AETLLE 390



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 22/196 (11%)

Query: 25  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 84
           E+D Y AD  Y R  +LN +G Y           RE       A + Y+ A  I     S
Sbjct: 202 ELDPYSADAWYNRGIVLNRMGRY-----------RE-------AVESYDYAIAIQEDFGS 243

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W  +G  L   G++  A  +++ VLE +  +       A        Y  ++++++ AL
Sbjct: 244 AWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLAL 303

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           +  P+   A   G+G C   L +  +A    +RA+ L PE  E   A A  D + N A  
Sbjct: 304 EEDPAYAEAW-YGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKA--DCEYN-ARR 359

Query: 205 IRKGMEKMQRAFEIYP 220
           ++  ++  +R  E+ P
Sbjct: 360 LQDALQSYRRVIELDP 375


>gi|422338995|ref|ZP_16419955.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
 gi|355372122|gb|EHG19465.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
          Length = 652

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 94/416 (22%), Positives = 179/416 (43%), Gaps = 52/416 (12%)

Query: 68  ATQYYNKASRIDMHEPSTWV-GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           A Q Y+KA  +D +  S +   +G    + G+ E+A   +   ++ + ++  +   +   
Sbjct: 28  AIQNYDKAIELDSNVNSVYYYNRGNAYFSLGKFEEAIQDYNKAIDLNPNDDLSYSNRGNA 87

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            F+ G++ D+++ Y +A+ ++P+         G     L +   A Q + + + L+P + 
Sbjct: 88  YFSLGKFEDAIQDYNKAIDLNPNNASYYN-NRGTTFTNLEKYEDAIQDYNKTIDLNPNDN 146

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            A           NE     K +    +A ++ P    A       +F  G  F      
Sbjct: 147 YAYFNRGAAFTYLNEY---EKAINDFNKAIDLNPNDDSA-------YFNRGTAFTNLSNY 196

Query: 247 ETALAVTNHG---PTKSHSYYNLARS-YHSKGDYEKAGLYYMASVKEINKPHE----FIF 298
           E A+   N      + + SYYN   + Y ++G+Y++A       VK+ +K  E    F+F
Sbjct: 197 EKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEA-------VKDFSKAIELNPIFVF 249

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            Y  LG +   L D+  A+ N  K +++ P+  +     G  YV   + ++A +   KA 
Sbjct: 250 GYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVKDFSKAI 309

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--------IEVL---- 406
           +++P D + + +LG L I       L+ ++ A   L KA +  P        IE++    
Sbjct: 310 ELNPNDKEYYYNLGILYID------LNNYEKAIETLNKAIDLDPNFSDARNVIEIISTTQ 363

Query: 407 NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
           NN  VI F K     + QS K++  + I+  + +     Y+   +A+  + KD  L
Sbjct: 364 NNKKVIKFGKN---GSKQSIKES-KEPIYSIIFNQINSLYI---TANFKKIKDELL 412


>gi|225552373|ref|ZP_03773313.1| TPR domain protein [Borrelia sp. SV1]
 gi|225371371|gb|EEH00801.1| TPR domain protein [Borrelia sp. SV1]
          Length = 379

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAASYR 137

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
           + N     +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 138 KLN---NFQKSKQTYLKVMELMPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|408670822|ref|YP_006870893.1| hypothetical protein BgCN_0192 [Borrelia garinii NMJW1]
 gi|407240644|gb|AFT83527.1| hypothetical protein BgCN_0192 [Borrelia garinii NMJW1]
          Length = 379

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKQNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALRYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLDIVEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325


>gi|386853601|ref|YP_006202886.1| hypothetical protein KK9_0193 [Borrelia garinii BgVir]
 gi|365193635|gb|AEW68533.1| Hypothetical protein KK9_0193 [Borrelia garinii BgVir]
          Length = 379

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKQNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYREALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLDIVEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325


>gi|449104715|ref|ZP_21741453.1| hypothetical protein HMPREF9730_02350 [Treponema denticola AL-2]
 gi|449119577|ref|ZP_21755973.1| hypothetical protein HMPREF9725_01438 [Treponema denticola H1-T]
 gi|449121968|ref|ZP_21758314.1| hypothetical protein HMPREF9727_01074 [Treponema denticola MYR-T]
 gi|448949409|gb|EMB30234.1| hypothetical protein HMPREF9727_01074 [Treponema denticola MYR-T]
 gi|448950567|gb|EMB31389.1| hypothetical protein HMPREF9725_01438 [Treponema denticola H1-T]
 gi|448962851|gb|EMB43537.1| hypothetical protein HMPREF9730_02350 [Treponema denticola AL-2]
          Length = 415

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A+  G+  C   + Q  KA   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPKAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 213 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 268
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|189426262|ref|YP_001953439.1| hypothetical protein Glov_3213 [Geobacter lovleyi SZ]
 gi|189422521|gb|ACD96919.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 639

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 136/311 (43%), Gaps = 52/311 (16%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  L AKGEV++A+ A++ VL+   D +  L     + F  GR  D+L  Y+ A  +  S
Sbjct: 280 GDQLAAKGEVDKAAEAYRAVLKQQPDAIEPLEKLGALYFRAGRDGDALLAYRDATHLGSS 339

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
            P  +   +GL   K  QL +A  A++RA++  P   EA + L          A IR G 
Sbjct: 340 NP-EVYYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEARLKL----------ADIRLGR 388

Query: 210 EKMQRAFEIY-------PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
              Q A E Y       P  A     LA  F       L E   E+  AV    P    +
Sbjct: 389 GNTQEAVEQYVEFLKLKPESADIHLKLARIFVKNKNLNLAE---ESYKAVLKLAPDNPEA 445

Query: 263 YYNLARSYHSKGDYEKAGLYYMASV---KEINKPHEFIFPYYGLGQ------------VQ 307
              LA  Y +KG  +KA  +Y  ++   +E N+    +   Y   +            V+
Sbjct: 446 NRELAAVYRAKGATDKAVEHYTKALELQEEDNESRNALVAIYVKDKKYDELAELLQEAVE 505

Query: 308 L---------KLG---DFR----SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
           L         KLG   DF+    +A+ +++K  E+ PD+   L ALG +Y++ G++ +A+
Sbjct: 506 LAPDDANNHYKLGLIYDFKKEYDNAIASYKKAAELKPDHARALHALGRVYMKTGRLSEAR 565

Query: 352 ELLRKAAKIDP 362
           E L  A K DP
Sbjct: 566 EALEAARKADP 576



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 180/458 (39%), Gaps = 84/458 (18%)

Query: 133 YSDSLEFYKRALQVHPSCP--GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           YSD     K   Q+  SCP   A +   GL   + G +  A   ++RALQ +P    A  
Sbjct: 44  YSDDAARTKDEAQILSSCPDGAAAQFVQGLQAERSGNIDGAIAGYRRALQKEPGLAVASG 103

Query: 191 ALAVM----DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            L ++     LQ + A  + KG+     A +  P    AL  +      T + F      
Sbjct: 104 NLGLLYLQKGLQDDAAVALTKGI-----AGQPLPAYHKALGKI-----MTDRKFY----- 148

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
             ALA+ ++G   +    + A                +A   E+         Y   GQ 
Sbjct: 149 --ALALYHYGEASAKLPADAA---------------VLAGQAEV---------YAAQGQT 182

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
              + +FR AL        + P + +   AL  IY+Q  Q E A  LL+KA+  +PR + 
Sbjct: 183 DRAVDEFRRALL-------LDPSHEQASLALAGIYLQQNQQEAALNLLKKASTANPRSSS 235

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKK---AGEEVPIEVLNNI-GVIHFEKGEFESA 422
             + L +  I    G A  A +  R L  K     EE+P      + G     KGE + A
Sbjct: 236 LHLMLAD--IYEKNGDAKQA-EYERLLGGKKVVVTEELPARAEGVVLGDQLAAKGEVDKA 292

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV-------EL 475
            ++++  L           K +   I+    +       L+ R   DG+ +        L
Sbjct: 293 AEAYRAVL-----------KQQPDAIEPLEKL-----GALYFRAGRDGDALLAYRDATHL 336

Query: 476 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
             +   V +NL  L E+ +    A V Y+  + K   Y +A L+LA I   R N Q ++E
Sbjct: 337 GSSNPEVYYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEARLKLADIRLGRGNTQEAVE 396

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
              E LK+  +  +    L  + +KN +   A+E+++A
Sbjct: 397 QYVEFLKLKPESADIHLKLARIFVKNKNLNLAEESYKA 434


>gi|449129153|ref|ZP_21765384.1| hypothetical protein HMPREF9724_00049 [Treponema denticola SP37]
 gi|448945995|gb|EMB26860.1| hypothetical protein HMPREF9724_00049 [Treponema denticola SP37]
          Length = 415

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A+  G+  C   + Q  KA   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPKAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 213 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 268
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 850

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 166/395 (42%), Gaps = 57/395 (14%)

Query: 2   QREYFKQGKVEQFRQILEEGSSP-----EIDEYYADVRYERIAILNALGVYYTYLGKIET 56
           Q++Y + G  +Q +   +E  +      E+D  Y +    R   LN+L  Y         
Sbjct: 3   QQKYHQAGLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQE------- 55

Query: 57  KQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN 116
                      A + YNKA  I+ +    +  KG  L A  ++++A S +  V+E D + 
Sbjct: 56  -----------AIKNYNKALEINPNYKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNY 104

Query: 117 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 176
             A L +    FN  ++ ++L  + +ALQ  P    A    I L   KLGQ  +A   + 
Sbjct: 105 KQAHLNKGLCFFNLNQFQEALNNFNKALQCDPKYSLAC-YNIALSYQKLGQSQQALTYYD 163

Query: 177 RALQLDPENVEALVALAVMDLQ---------------------ANEAAGIRKGMEKMQRA 215
           +A+ LDP    A +   ++ +                       N    +   ++++ + 
Sbjct: 164 KAINLDPNYKNAYLNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQN 223

Query: 216 FEIYPYCAMALNYLANHFF-FTGQHFLVEQLTETALAVTNH------GPTKSHSYYNLAR 268
            E   +   A+    N F  +  +  L +QL +   A+ N+       P  S++Y N   
Sbjct: 224 QEAIQHYDKAIQIDKNAFLAYYNKAILCKQLGKNQEALNNYNKVIEINPNYSNAYLNKGS 283

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK-LGDFRSALTNFEKVLEIY 327
            +   G YE+A   Y   V +++  H+ +  YY  G + LK LG ++ ++ N+ K +++ 
Sbjct: 284 LFLFSGKYEEAIKNY-DKVIQLDPNHKQV--YYNKG-ISLKALGRYQESIENYNKAIQLD 339

Query: 328 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           P+NC+     G     LG+ + A +   KA +IDP
Sbjct: 340 PNNCKIQNNKGLALEALGKSQDALDCYNKAIQIDP 374



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 27/226 (11%)

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           GL +   G+  +A  ++ +A++LDP+  EA     V     N     ++ ++   +A EI
Sbjct: 10  GLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVA---LNSLNQYQEAIKNYNKALEI 66

Query: 219 YPYCAMALNYLANHFFFTGQHF-LVEQLTETALA---VTNHGPTKSHSYYNLARSYHSKG 274
            P   +A       ++  G     ++QL E       V    P    ++ N    + +  
Sbjct: 67  NPNYKLA-------YYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLN 119

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL-----KLGDFRSALTNFEKVLEIYPD 329
            +++A       +   NK  +   P Y L    +     KLG  + ALT ++K + + P+
Sbjct: 120 QFQEA-------LNNFNKALQ-CDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPN 171

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
                   G +Y+  GQ ++A +  R+   IDP+   A+I++G  L
Sbjct: 172 YKNAYLNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTL 217


>gi|440747552|ref|ZP_20926809.1| TPR repeat protein [Mariniradius saccharolyticus AK6]
 gi|436484022|gb|ELP40042.1| TPR repeat protein [Mariniradius saccharolyticus AK6]
          Length = 398

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 70/305 (22%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-- 154
           G+ E A +    +LE D  +   +  +  + +  G+Y+ +LE +   L + P     I  
Sbjct: 71  GDTEGALTDLNSLLELDPLHYDGIFLRGTMRYRLGQYALALEDFSNLLHIPPGPTQTIIY 130

Query: 155 -RLG----------------------IGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            R G                      IGLC+  LG+  +A+++F  A+ L P   +  + 
Sbjct: 131 QRKGYQSGVSGVFTQQSGNNAHVFENIGLCQLALGEWREAKKSFDEAISLAPGTADYYLH 190

Query: 192 LAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
                 +A E AG   +  E   +A +I PY  MA  YLA                  AL
Sbjct: 191 RG----RAFEMAGDTARAKEDFMKALDINPYHPMAHQYLA------------------AL 228

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
           A                   ++ GD+E A  +Y  +++  ++P +F   Y   G  +L+ 
Sbjct: 229 A-------------------NATGDWESAEKFYDQAIE--DQP-DFALSYKQRGYQRLRA 266

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
             +  AL +F+KVLEI PD+ E LK   ++  +L + ++A EL  +A  ++P DAQA+  
Sbjct: 267 EKWTEALEDFDKVLEIQPDDAEALKYKAYVLQKLKRADQALELYNRAIGLNPMDAQAYFS 326

Query: 371 LGELL 375
            G +L
Sbjct: 327 KGNIL 331



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 12/132 (9%)

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
           PYY    V+ + GD   ALT+   +LE+ P + + +   G +  +LGQ   A E      
Sbjct: 59  PYYYRSLVRDRAGDTEGALTDLNSLLELDPLHYDGIFLRGTMRYRLGQYALALEDFSNLL 118

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
            I P   Q  I   +   S  +G             +++G      V  NIG+     GE
Sbjct: 119 HIPPGPTQTIIYQRKGYQSGVSG----------VFTQQSGNNA--HVFENIGLCQLALGE 166

Query: 419 FESAHQSFKDAL 430
           +  A +SF +A+
Sbjct: 167 WREAKKSFDEAI 178


>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
          Length = 1979

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 157/373 (42%), Gaps = 31/373 (8%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A + +  A  +D    + W   G  LL     E+AS AF   L    DNV AL  ++   
Sbjct: 1598 AVEAFENAVELDPALEAAWEQIGLSLLRLNMYEEASQAFSSALTLKPDNVNALYSRSEAS 1657

Query: 128  FNRGRYSDSLEFYKRALQVHP----SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
            F    + ++ +  ++ L   P    S     RLGI   R +L +  KA +AF   LQ DP
Sbjct: 1658 FQLQHFEEAAQDLEKVLLSAPDFLNSIEACYRLGIA--RMELQECEKALEAFDIVLQQDP 1715

Query: 184  ENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
             + EAL    L + +L   EAA    GM       E  P    +LNYL       G   L
Sbjct: 1716 AHREALYYRGLVLFNLSEYEAAAETFGM-----LLEASPEDPESLNYL-------GLCLL 1763

Query: 242  VEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
              +  E AL          P    + YN A +   K +  +  + Y   + +I+  +  +
Sbjct: 1764 ELESPEAALKAFEKAALFNPKNEETLYNAATTL-IKLNRPQESIDYFDRILDISPENLDV 1822

Query: 298  FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
              Y G+   +L++  +R AL  F+  LE  P+N + + ++G +  +    E A     +A
Sbjct: 1823 LNYKGIAFCKLEM--YREALKAFDLALEKDPENIKAIYSVGVVCFKQKMYETACRAFDEA 1880

Query: 358  AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
              I+P   Q+   LG  L   +     DA +T   LL+    +V  + +N  GVI  + G
Sbjct: 1881 LAINPWHEQSLKYLGISLAKIEEYE--DALRTFDRLLRIRPHDV--QAMNYRGVILGKLG 1936

Query: 418  EFESAHQSFKDAL 430
            ++  A  +F + L
Sbjct: 1937 KYTEAINTFNEIL 1949



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 18/308 (5%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K +HF  A + +++ + +D         +G+LL  +G+ E+A  AF  +LE + + + A 
Sbjct: 357 KLQHFGEAAKSFSRTAELDPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQNPEFIKAQ 416

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
             +  +    GR  ++L+   ++L+  P   G + L  GL     G+   A +A ++  +
Sbjct: 417 KLRGTMLIKLGRIEEALDSLAQSLEKEPENYG-LWLQQGLILLDNGKFEPALKALEKVAE 475

Query: 181 LDPENVEALV----ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 236
           L P+N    +    AL  MD          + +E  +    + PY     N   N     
Sbjct: 476 LKPDNDACWMNKGYALYSMD-------RYEEALEDFEEGLRLNPYLEKGWN---NKGIVL 525

Query: 237 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
           G+    E+  E      +  P    ++ N      +  DYEKA   +   +K    P + 
Sbjct: 526 GKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLK--TNPED- 582

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
           +   Y  G   LKLG   +AL  FEK+L + PD  + L +L     +LG+ E+A E   K
Sbjct: 583 LDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEK 642

Query: 357 AAKIDPRD 364
            A  +P D
Sbjct: 643 LAAKNPED 650



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 153/359 (42%), Gaps = 40/359 (11%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W  K   L+  G+ E+A       L     +  AL  +  +     RY D+ + + + L+
Sbjct: 212 WKQKYFSLIKLGKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDAEKTFTKILK 271

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEAA 203
           ++P     I L  GL   +L +L  A +AF+ A++LDP   EA     LA+M L+  E A
Sbjct: 272 INPG-NKEIWLKKGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWNYKCLALMKLEVYEEA 330

Query: 204 GIRKGMEKMQRAFEIYPYC-------AMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
                +E      EIYP         A+AL  L  HF    + F     + TA       
Sbjct: 331 -----LEAFDSVLEIYPETKEIWYNRALALVKL-QHFGEAAKSF-----SRTA----ELD 375

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P    + Y   R    +G YE+A L    S+ E N   EFI      G + +KLG    A
Sbjct: 376 PAYGDALYQQGRLLAREGKYEEA-LKAFDSMLEQNP--EFIKAQKLRGTMLIKLGRIEEA 432

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           L +  + LE  P+N       G I +  G+ E A + L K A++ P +   +++ G  L 
Sbjct: 433 LDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALY 492

Query: 377 SSDT-GAALDAFKTARTL---LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 431
           S D    AL+ F+    L   L+K          NN G++  + G  E A ++F+ A+ 
Sbjct: 493 SMDRYEEALEDFEEGLRLNPYLEKG--------WNNKGIVLGKLGRTEEALEAFEKAVS 543



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 164/413 (39%), Gaps = 53/413 (12%)

Query: 63   EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
            E ++ A + +  A     +    W  +G  L     +E+A+ AF+  +  + +   AL  
Sbjct: 779  ERYLPALKTFESALEEKPNSDILWYYRGLSLYRINMLEEAACAFESSVRLNPEMKEALEY 838

Query: 123  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
            +A   F   +Y  +L+  +  L+ +P    A+     +C  +L +     +   R L+LD
Sbjct: 839  RAICLFETEQYKAALKALEAVLEGNPENLSALH-KKAICFLQLKKYKSGAETLLRVLELD 897

Query: 183  PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE-IYPYCAMALNYLANHF-------- 233
            P N E    L +   ++ E        E++    +  + YC    +Y  N+         
Sbjct: 898  PNNKEVKFELGIASFESGEYNKALSLFEEVSEGSDDSFVYCPEKNSYELNNSEQNVSEQG 957

Query: 234  --------------FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR----------- 268
                           F+ Q+   +  +E +++  N+   K     N  +           
Sbjct: 958  ISEQNFSEQNNSEQNFSEQNNSEQNFSEQSISEQNNSNQKFSEQNNSKQKFSEQSISKEK 1017

Query: 269  --SYHSKG-------DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
              S++ KG        YE+A L   + + E N P  F+  +Y  G    KL   + A  +
Sbjct: 1018 YSSFYWKGLVLIRLEAYERA-LEVFSRLTE-NNPL-FVEAWYLKGISHSKLKQHKEAAKD 1074

Query: 320  FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA-FIDLGELLISS 378
            FEKVLE+ P   +T   LG  Y +LG  E+A  +   A K+DP +  A ++    LL S 
Sbjct: 1075 FEKVLELDPAYQDTCYQLGLSYFELGNFEEAIRVFESALKMDPENLDALYMRSLALLRSK 1134

Query: 379  DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 431
              G +   F   R +LK+   +   E L ++    F++G +E A   F   L 
Sbjct: 1135 RYGESASGF---REVLKRNPSDT--EALAHLSTASFKQGFYEEALGLFDQVLS 1182



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 119/526 (22%), Positives = 212/526 (40%), Gaps = 57/526 (10%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS-AFKIVLEADRDNVPALL 121
           E F  A + Y+ A  I+   P  W  KG L  A+ E  +AS   F+  +E + +   A  
Sbjct: 87  EKFEAALETYDNALEINPDNPKIWYQKG-LAFAELEKNEASILCFEKAIELEPECGSAWY 145

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
            +  V    G Y ++LE ++ AL+++P    A     GL    L + G+A + F   ++ 
Sbjct: 146 ARGTVTGKTGNYEEALECFEHALEINPKNSDAC-YSKGLVLANLEKYGEALECFDSLIRE 204

Query: 182 DPENVEALVA--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            P + +A      +++ L  NE A     +E +      +P    AL Y           
Sbjct: 205 KPRHKDAWKQKYFSLIKLGKNEEA-----LECVDAFLRKFPVSETAL-YQKGILLNELSR 258

Query: 240 FLVEQLTETALAVTNHGPT-----KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
           +   + T T +   N G       K  +   L R   +   +E+A       +K ++  +
Sbjct: 259 YEDAEKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFEEA-------IK-LDPTY 310

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
              + Y  L  ++L++  +  AL  F+ VLEIYP+  E         V+L    +A +  
Sbjct: 311 FEAWNYKCLALMKLEV--YEEALEAFDSVLEIYPETKEIWYNRALALVKLQHFGEAAKSF 368

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
            + A++DP    A    G LL  +  G   +A K   ++L++  E +  + L   G +  
Sbjct: 369 SRTAELDPAYGDALYQQGRLL--AREGKYEEALKAFDSMLEQNPEFIKAQKLR--GTMLI 424

Query: 415 EKGEFESAHQSFKDALGD-----GIWL----TLLDSKTKTYVIDASASMLQFKDMQLFHR 465
           + G  E A  S   +L       G+WL     LLD+      + A   + + K       
Sbjct: 425 KLGRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELKP------ 478

Query: 466 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 525
            +ND   +    NK   L+++ R  E + D        RL  +  + + +  + L  + +
Sbjct: 479 -DNDACWM----NKGYALYSMDRYEEALEDFEEG---LRLNPYLEKGWNNKGIVLGKLGR 530

Query: 526 ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 571
                  ++E   +A+ +   + +A    G + L  DD+ KA E F
Sbjct: 531 TEE----ALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAF 572



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 155/408 (37%), Gaps = 82/408 (20%)

Query: 23  SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYN----KASRI 78
           + E+D  Y D  Y++  +L   G Y   L   ++   E+   FI A +       K  RI
Sbjct: 371 TAELDPAYGDALYQQGRLLAREGKYEEALKAFDS-MLEQNPEFIKAQKLRGTMLIKLGRI 429

Query: 79  DM----------HEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           +            EP     W+ +G +LL  G+ E A  A + V E   DN    + +  
Sbjct: 430 EEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGY 489

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
             ++  RY ++LE ++  L+++P          G+   KLG+  +A +AF++A+ L P+ 
Sbjct: 490 ALYSMDRYEEALEDFEEGLRLNPYLEKGWN-NKGIVLGKLGRTEEALEAFEKAVSLRPDF 548

Query: 186 VEA-----LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            +A     L+ LAV D             EK   AF+                       
Sbjct: 549 EDAWKNRGLILLAVDD------------YEKASEAFD----------------------- 573

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
                      V    P    S YN   +    G  E A L     +  +N  +  +   
Sbjct: 574 ----------EVLKTNPEDLDSIYNRGTALLKLGKTETA-LECFEKILSLNPDYPDLL-- 620

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y L   Q KLG    AL  FEK+    P++ +  +  G   +++G+ + A +   +    
Sbjct: 621 YSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDTALQAFDQVLSE 680

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
            P   +A+   G  LI       L  F+ A T    A +EV +  LNN
Sbjct: 681 KPESREAWYRKGLALIK------LKRFEEAIT----AFDEVIVRNLNN 718



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 153/394 (38%), Gaps = 48/394 (12%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + + K  +I+      W+ KG  L+    +  A  AF+  ++ D     A   +    
Sbjct: 262 AEKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWNYKCLAL 321

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
                Y ++LE +   L+++P     I     L   KL   G+A ++F R  +LDP   +
Sbjct: 322 MKLEVYEEALEAFDSVLEIYPET-KEIWYNRALALVKLQHFGEAAKSFSRTAELDPAYGD 380

Query: 188 ALV--------------ALAVMD--LQAN----EAAGIRKGME-KMQRAFEIYPYCAMAL 226
           AL               AL   D  L+ N    +A  +R  M  K+ R  E     A +L
Sbjct: 381 ALYQQGRLLAREGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKLGRIEEALDSLAQSL 440

Query: 227 NYLANHFFFTGQHFLV-------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
                ++    Q  L+       E   +    V    P     + N   + +S   YE+A
Sbjct: 441 EKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEA 500

Query: 280 GLYYMASVKEINKPHEFIFPYY-----GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
              +   ++        + PY        G V  KLG    AL  FEK + + PD  +  
Sbjct: 501 LEDFEEGLR--------LNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAW 552

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 393
           K  G I + +   EKA E   +  K +P D  +  + G  L+    T  AL+ F+   +L
Sbjct: 553 KNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSL 612

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
                 + P ++L ++ V   + G+ E A ++F+
Sbjct: 613 ----NPDYP-DLLYSLAVAQAKLGKQEEALETFE 641



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 149/363 (41%), Gaps = 74/363 (20%)

Query: 84   STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
            S++  KG +L+     E+A   F  + E +   V A   +        ++ ++ + +++ 
Sbjct: 1019 SSFYWKGLVLIRLEAYERALEVFSRLTENNPLFVEAWYLKGISHSKLKQHKEAAKDFEKV 1078

Query: 144  LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN--- 200
            L++ P+        +GL  ++LG   +A + F+ AL++DPEN++AL   ++  L++    
Sbjct: 1079 LELDPAYQDTC-YQLGLSYFELGNFEEAIRVFESALKMDPENLDALYMRSLALLRSKRYG 1137

Query: 201  -EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
              A+G R+                                            V    P+ 
Sbjct: 1138 ESASGFRE--------------------------------------------VLKRNPSD 1153

Query: 260  SHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLK-LGDFRSAL 317
            + +  +L+ +   +G YE+A GL+     K  N   + +    G   V LK LG+ + A 
Sbjct: 1154 TEALAHLSTASFKQGFYEEALGLFDQVLSK--NPERKTVLFRKG---VALKALGEVKRAS 1208

Query: 318  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ-------AFID 370
            T F+ VL++ PD    L+   + + +L +  +A E  + A +   +          AF  
Sbjct: 1209 TIFDSVLKLKPDCTYALEQKAYTHFELEEYPEAVEAFKTALEYCQKKEDLYYYRGIAFFR 1268

Query: 371  LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            LG      +   A+ +F+ A  L    G + P E+    G+ +FE  E+E A + F   L
Sbjct: 1269 LG------NFEEAVRSFENALDL----GCQQP-EISYYTGIAYFENREYEKAVEIFNAIL 1317

Query: 431  GDG 433
              G
Sbjct: 1318 DSG 1320



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 79/390 (20%), Positives = 143/390 (36%), Gaps = 100/390 (25%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + + KA  +       W  +G +LLA  + E+AS AF  VL+ + +++ ++  +    
Sbjct: 534 ALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTAL 593

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG--------------------- 166
              G+   +LE +++ L ++P  P  +   + + + KLG                     
Sbjct: 594 LKLGKTETALECFEKILSLNPDYPDLL-YSLAVAQAKLGKQEEALETFEKLAAKNPEDLK 652

Query: 167 ----------QLGK---ARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEK 211
                     ++GK   A QAF + L   PE+ EA     LA++ L+  E A        
Sbjct: 653 IQRRKGKFAMEIGKYDTALQAFDQVLSEKPESREAWYRKGLALIKLKRFEEA-------- 704

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
                 I  +  + +  L N       +  ++ L    +       TK   Y +    Y 
Sbjct: 705 ------ITAFDEVIVRNLNNKEISNSDYEELKNLDRDDIDNPARDETKRPDYEDENPDYE 758

Query: 272 SK-GDYEKAGLY----------YMASVKEI-----NKPHEFIFPYY-GLGQVQLKLGD-- 312
            +  DYE A  Y          Y+ ++K        KP+  I  YY GL   ++ + +  
Sbjct: 759 DENSDYENARTYKGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSLYRINMLEEA 818

Query: 313 ------------------------------FRSALTNFEKVLEIYPDNCETLKALGHIYV 342
                                         +++AL   E VLE  P+N   L      ++
Sbjct: 819 ACAFESSVRLNPEMKEALEYRAICLFETEQYKAALKALEAVLEGNPENLSALHKKAICFL 878

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           QL + +   E L +  ++DP + +   +LG
Sbjct: 879 QLKKYKSGAETLLRVLELDPNNKEVKFELG 908



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 11/192 (5%)

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
            +  +G  QLKL  + +A+  FEK+LE+ P+  +     G     L Q E+A E    A +
Sbjct: 1548 WMKMGLSQLKLEHYEAAIEIFEKLLEVKPEASDLWYVAGLALRGLDQDEQAVEAFENAVE 1607

Query: 360  IDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
            +DP    A+  +G  LL  +    A  AF +A TL         +  L +     F+   
Sbjct: 1608 LDPALEAAWEQIGLSLLRLNMYEEASQAFSSALTLKPDN-----VNALYSRSEASFQLQH 1662

Query: 419  FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ--FKDMQLFH-RFENDGNHVEL 475
            FE A Q  +  L        L+S    Y +  +   LQ   K ++ F    + D  H E 
Sbjct: 1663 FEEAAQDLEKVLLSAP--DFLNSIEACYRLGIARMELQECEKALEAFDIVLQQDPAHREA 1720

Query: 476  PWNKVTVLFNLA 487
             + +  VLFNL+
Sbjct: 1721 LYYRGLVLFNLS 1732


>gi|410912744|ref|XP_003969849.1| PREDICTED: Bardet-Biedl syndrome 4 protein-like [Takifugu rubripes]
          Length = 532

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 20/227 (8%)

Query: 211 KMQRAFEIYPYCAMA-------LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
           K+Q + E++  CA+        L  +A   F  G+H    +    A  VT+     SH  
Sbjct: 80  KIQESLELFQSCAILNPSSSDNLKQVARSLFLLGKHKAAIEFYHEAARVTDKDWEISH-- 137

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            NL   Y    D + A   ++    +INK H+  F    LG+V L  GD   A+  +++ 
Sbjct: 138 -NLGLCYFFIKDLKNAE-EHLNRALQINK-HDKTF--MMLGKVHLLAGDTDKAIDVYKRA 192

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGA 382
           +E  P+N E L  LG +Y+QLG+ +KA E L  A   DP + +A +  G ++    D   
Sbjct: 193 VEFSPENTEVLTTLGLLYLQLGKYQKAFEHLGNALTFDPSNYKAILAAGSMMQTHGDFDV 252

Query: 383 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           A++ ++ A  ++    E  P+   NNIG+  F K ++ +A    K A
Sbjct: 253 AMNKYRVAACVVP---ESPPL--WNNIGMCFFGKKKYVAAFSCLKRA 294



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 120/294 (40%), Gaps = 39/294 (13%)

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           E +N AL++N K+     MLG + L   D  KA + + RA   + +  +   TL L    
Sbjct: 154 EHLNRALQIN-KHDKTFMMLGKVHLLAGDTDKAIDVYKRAVEFSPENTEVLTTLGLL--- 209

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
                        L+    +KA E     +    SN  A   AG ++   G FDV+ + +
Sbjct: 210 ------------YLQLGKYQKAFEHLGNALTFDPSNYKAILAAGSMMQTHGDFDVAMNKY 257

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT--DAQILLYL 711
                  +  V  + P +W N+   +F +  +  A     +CL++ +Y +  D ++L  L
Sbjct: 258 R-----VAACVVPESPPLWNNIGMCFFGKKKYVAAF----SCLKRAHYLSPFDWKVLYNL 308

Query: 712 ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF----SASTLQKTRRTADEV 767
              H   +Q+      L  AI+L P    L     VA+       +A+   +   T D+ 
Sbjct: 309 GLVHLTMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNLEDVENATKAYEQAVTMDDS 368

Query: 768 RSTVAELENAVRVFSHLSAASNLHLHGFDEKKI------NTHVEYCKHLLDAAK 815
              V  L  A+ +++H      L  +   E+K+      N++ E+   L+D A+
Sbjct: 369 NPLV-NLNFAIFLYNHGEKEEALAQYQEMERKVNLLRDSNSNFEFDAELIDMAQ 421


>gi|94967946|ref|YP_589994.1| hypothetical protein Acid345_0917 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549996|gb|ABF39920.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 566

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 175/406 (43%), Gaps = 39/406 (9%)

Query: 45  GVYYTYLGKIETKQREKEEH------------FILATQYYNKASRID-MHEPSTWVGKGQ 91
           G    Y   +ET  +    H            F+ A Q + +A ++D  +EP+ +   G 
Sbjct: 134 GAIAVYRSALETNSQSAPLHDDLGSLLAQKKDFVAAQQQFEQALKLDRQYEPAHF-HLGV 192

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
            LL++ +  +A  + +  +    ++V A      V    G  +++L+ YK A Q     P
Sbjct: 193 ALLSQDKDPEAMLSLQEAVRLAPNDVAAHFFLGRVLETLGDNANALQNYKDAAQRSSEFP 252

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
           G ++  +GL   ++G++  A  AFQ+A+   P+N +    L +  +QA +  G    + +
Sbjct: 253 G-LQERLGLTAQRVGEMPTAISAFQKAIAQSPQNPDLHNDLGLAFMQAGDGEG---AIRE 308

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH------GPTKSHSYYN 265
             +A  + P     + YL N     G  +L  QL+E   AV N        P  +  +++
Sbjct: 309 FNQALNLKPED---VGYLGN----LGAAYL--QLSEFDNAVDNFRKALQIAPANASLHHD 359

Query: 266 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
           LA +   K D   A      +++   K ++    +Y LG    + G+F +A+   E  L 
Sbjct: 360 LALTLKLKDDLAGAAAELREAIRLDPKLYD---AHYTLGVTLWQQGEFPAAVEELEAALA 416

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL--ISSDTGAA 383
             PD  E    LG +Y Q+ +  ++ E LR A KI P  A A   L  +L  +    GA+
Sbjct: 417 QKPDYAEAYYTLGTVYKQMNKPRESAEALRSALKIQPDFAGAHTTLAAVLRQLGDTAGAS 476

Query: 384 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
            +A   A    KK G +  +   N+ G+     G+ + A   F+ A
Sbjct: 477 EEARIGAELAKKKTGMQAAVFATNS-GIRLLNAGDLDGAVSQFRRA 521



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 109/493 (22%), Positives = 181/493 (36%), Gaps = 111/493 (22%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP- 148
           GQ LLA  + + A S ++I ++   + V A  G       +G    ++  Y+ AL+ +  
Sbjct: 89  GQALLADHQADAAISEYRIAVKMAPNEVEANRGLGRSLSTKGDLDGAIAVYRSALETNSQ 148

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
           S P    LG  L + K      A+Q F++AL+LD +   A   L V  L  ++     + 
Sbjct: 149 SAPLHDDLGSLLAQKK--DFVAAQQQFEQALKLDRQYEPAHFHLGVALLSQDKDP---EA 203

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA- 267
           M  +Q A  + P      N +A HFF      ++E L + A A+ N        Y + A 
Sbjct: 204 MLSLQEAVRLAP------NDVAAHFFLG---RVLETLGDNANALQN--------YKDAAQ 246

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
           RS    G  E+ GL                           ++G+  +A++ F+K +   
Sbjct: 247 RSSEFPGLQERLGL------------------------TAQRVGEMPTAISAFQKAIAQS 282

Query: 328 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 387
           P N +    LG  ++Q G  E A     +A  + P D                       
Sbjct: 283 PQNPDLHNDLGLAFMQAGDGEGAIREFNQALNLKPED----------------------- 319

Query: 388 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 447
                          +  L N+G  + +  EF++A  +F+ AL                +
Sbjct: 320 ---------------VGYLGNLGAAYLQLSEFDNAVDNFRKAL---------------QI 349

Query: 448 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--------FNLARLLEQIHDTVAA 499
             A+AS+    D+ L  + ++D         +   L        + L   L Q  +  AA
Sbjct: 350 APANASL--HHDLALTLKLKDDLAGAAAELREAIRLDPKLYDAHYTLGVTLWQQGEFPAA 407

Query: 500 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 559
                  L +  DY +AY  L  + K  N  + S E +  ALK+   +  A + L  +  
Sbjct: 408 VEELEAALAQKPDYAEAYYTLGTVYKQMNKPRESAEALRSALKIQPDFAGAHTTLAAVLR 467

Query: 560 KNDDWVKAKETFR 572
           +  D   A E  R
Sbjct: 468 QLGDTAGASEEAR 480



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 62/275 (22%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           GD  SAL++F++  ++ P+N E   A+G    + G+  +A    R A K+ P  A     
Sbjct: 28  GDDASALSSFQQASKLDPNNPEYQNAVGQALFKQGRPAEAIPYFRHALKLRPDLAVIHAY 87

Query: 371 LGE-LLISSDTGAALDAFKTA-------------------------------RTLLKKAG 398
           LG+ LL      AA+  ++ A                               R+ L+   
Sbjct: 88  LGQALLADHQADAAISEYRIAVKMAPNEVEANRGLGRSLSTKGDLDGAIAVYRSALETNS 147

Query: 399 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML-QF 457
           +  P+   +++G +  +K +F +A Q F+ AL        LD + +        ++L Q 
Sbjct: 148 QSAPLH--DDLGSLLAQKKDFVAAQQQFEQALK-------LDRQYEPAHFHLGVALLSQD 198

Query: 458 KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
           KD +     +     V L  N V   F L R+LE + D   A           Q+Y DA 
Sbjct: 199 KDPEAMLSLQ---EAVRLAPNDVAAHFFLGRVLETLGDNANA----------LQNYKDAA 245

Query: 518 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 552
            R +     +  L L+ + V       G+ P A+S
Sbjct: 246 QRSSEFPGLQERLGLTAQRV-------GEMPTAIS 273


>gi|406951392|gb|EKD81348.1| hypothetical protein ACD_39C01851G0002 [uncultured bacterium]
          Length = 276

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 40/246 (16%)

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
           + +G+  ++ G +  A + ++RAL+L  ++ EA    A M + +  A  + K +E +QRA
Sbjct: 27  IALGIASFENGDVETAIRHYERALKLKSDSAEAH---AGMGISSARAGNLDKAVEHLQRA 83

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
           +E+ P C +  N+LA+ +F  G+   +++  E       +  T S+++ ++A +Y  +GD
Sbjct: 84  YELSPDCGLLANWLADAWFDKGE---LDRAIEYYSEAIRNNATDSNAHNDMADAYRLQGD 140

Query: 276 YEKAGLYY----------------MASVK-EINKPHEFI---------FP--------YY 301
           Y+KA   Y                MA  + ++N+P E +         FP          
Sbjct: 141 YQKAFELYRRTLQIDPLDTNAMLEMAQCQTQMNQPDEALQTLTNLINNFPSSRDSATAMV 200

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             G + L  GD+ +A + F++ LE +P N + L       ++ G  E+    L++  ++D
Sbjct: 201 ICGTILLGNGDYNNAGSWFDRALEFFPFNRQVLFQSAVCALKQGNSEQCAAHLKRILEMD 260

Query: 362 PRDAQA 367
           P D +A
Sbjct: 261 PSDNRA 266


>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
 gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
          Length = 471

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 135/329 (41%), Gaps = 32/329 (9%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           +K   I  +    W+ KG LL    + E+A  +F+  L  + ++   L+ ++  E N G 
Sbjct: 64  DKLLEIFPYNSELWLKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDKSAAEENMGL 123

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
           Y  + E  ++ L + P    A    +GL   +  +  +A   F+RA+++DP+ VE    L
Sbjct: 124 YQQAEESLRKVLDIDPENEDAF-FSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYEL 182

Query: 193 A------------------VMDLQANEAAG-IRKGM-----EKMQRAFEIYPYCAMALNY 228
                               +D     A+G   KG+      K++ A   +       + 
Sbjct: 183 GFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDD 242

Query: 229 LANHFFFTGQHFL----VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
            A+ ++  G         +Q  E    V    P    ++YNLA  Y   G+ ++A  YY 
Sbjct: 243 FASAWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKYYS 302

Query: 285 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
              K I    E+   Y   G     LG ++ AL +F K + I  D+ +  +A   +   L
Sbjct: 303 ---KAIESDEEYFEAYLARGYCYDSLGKYQLALRDFNKAISISSDDPDAWRAKADLEYSL 359

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
           G +E++ +   +AA++ P     + +L E
Sbjct: 360 GHLEESIKSYLEAARLQPDGYDIWYNLAE 388



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/362 (20%), Positives = 140/362 (38%), Gaps = 53/362 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   + KA  ++ ++  T V K       G  +QA  + + VL+ D +N  A      + 
Sbjct: 93  AIDSFEKALSLNPNDTETLVDKSAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLY 152

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
             + +Y++++ +++RA+++ P     +   +G C   L    KA +A+++ L  DP N  
Sbjct: 153 QRQFKYAEAIPYFERAIKIDPDYV-EVYYELGFCYEALNNFDKALEAYEKFLDFDPYNAS 211

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL----VE 243
                 ++         ++ G  K++ A   +       +  A+ ++  G         +
Sbjct: 212 GWYNKGII--------LVKTG--KLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQ 261

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           Q  E    V    P    ++YNLA  Y   G+ ++A  YY    K I    E+   Y   
Sbjct: 262 QAIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKYYS---KAIESDEEYFEAYLAR 318

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK-------------- 349
           G     LG ++ AL +F K + I  D+ +  +A   +   LG +E+              
Sbjct: 319 GYCYDSLGKYQLALRDFNKAISISSDDPDAWRAKADLEYSLGHLEESIKSYLEAARLQPD 378

Query: 350 --------------------AQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFK 388
                               A E   +  +I+P+D+ +     ++  I   T  A+D  +
Sbjct: 379 GYDIWYNLAETYYEANKWLNALEAYDQCLRINPKDSNSMYSKAKINFILHRTQEAIDCLR 438

Query: 389 TA 390
            A
Sbjct: 439 KA 440



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 28/262 (10%)

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           L Q C++F   ++ D L F  + L++ P     + L  G+    L +  +A  +F++AL 
Sbjct: 46  LIQDCIDF--IKFEDGLYFTDKLLEIFPY-NSELWLKKGILLNGLMKFEEAIDSFEKALS 102

Query: 181 LDPENVEALVALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           L+P + E LV  +     A E  G+ ++  E +++  +I P    A   L     +  Q 
Sbjct: 103 LNPNDTETLVDKSA----AEENMGLYQQAEESLRKVLDIDPENEDAFFSLG--LLYQRQF 156

Query: 240 FLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
              E +   E A+ +    P     YY L   Y +  +++KA       ++   K  +F 
Sbjct: 157 KYAEAIPYFERAIKID---PDYVEVYYELGFCYEALNNFDKA-------LEAYEKFLDFD 206

Query: 298 FPY-----YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
            PY     Y  G + +K G    A+  F+    +  D        G+    LG+ ++A E
Sbjct: 207 -PYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIE 265

Query: 353 LLRKAAKIDPRDAQAFIDLGEL 374
              K  +IDP D  AF +L  +
Sbjct: 266 CFHKVIEIDPYDETAFYNLASV 287



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 139/337 (41%), Gaps = 62/337 (18%)

Query: 26  IDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 85
           ID  Y +V YE       LG  Y  L            +F  A + Y K    D +  S 
Sbjct: 171 IDPDYVEVYYE-------LGFCYEALN-----------NFDKALEAYEKFLDFDPYNASG 212

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W  KG +L+  G++E+A + F +      D   A   +     + G+Y  ++E + + ++
Sbjct: 213 WYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIE 272

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 205
           + P    A    +     ++G+L +A + + +A++ D E  EA +A              
Sbjct: 273 IDPYDETAF-YNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLA-------------- 317

Query: 206 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
            +G            YC  +L          G++ L  +    A+++++  P    +  +
Sbjct: 318 -RG------------YCYDSL----------GKYQLALRDFNKAISISSDDPDAWRAKAD 354

Query: 266 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
           L    +S G  E++   Y+ + +     ++    +Y L +   +   + +AL  +++ L 
Sbjct: 355 LE---YSLGHLEESIKSYLEAARLQPDGYDI---WYNLAETYYEANKWLNALEAYDQCLR 408

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           I P +  ++ +   I   L + ++A + LRKA +I+P
Sbjct: 409 INPKDSNSMYSKAKINFILHRTQEAIDCLRKAFEINP 445



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 128/321 (39%), Gaps = 65/321 (20%)

Query: 280 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLG-------DFRSALTNFEKVLEIYPDNCE 332
           GLY+   + EI       FPY    ++ LK G        F  A+ +FEK L + P++ E
Sbjct: 59  GLYFTDKLLEI-------FPYNS--ELWLKKGILLNGLMKFEEAIDSFEKALSLNPNDTE 109

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
           TL         +G  ++A+E LRK   IDP +  AF  LG L            FK A  
Sbjct: 110 TLVDKSAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQ--------FKYAEA 161

Query: 393 L--LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFK-----DALGDGIWLT--LLDS 441
           +   ++A +  P  +EV   +G  +     F+ A ++++     D      W    ++  
Sbjct: 162 IPYFERAIKIDPDYVEVYYELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILV 221

Query: 442 KT------------KTYVIDASASMLQFKD------------MQLFHRFENDGNHVELPW 477
           KT             T V D  AS    K             ++ FH+       +E+  
Sbjct: 222 KTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKV------IEIDP 275

Query: 478 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
              T  +NLA + E+I +   A   Y   +   ++Y +AYL       +    QL++   
Sbjct: 276 YDETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRDF 335

Query: 538 NEALKVNGKYPNALSMLGDLE 558
           N+A+ ++   P+A     DLE
Sbjct: 336 NKAISISSDDPDAWRAKADLE 356


>gi|224532842|ref|ZP_03673457.1| TPR domain protein [Borrelia burgdorferi WI91-23]
 gi|224512231|gb|EEF82617.1| TPR domain protein [Borrelia burgdorferi WI91-23]
          Length = 379

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWIDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 375

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 135/315 (42%), Gaps = 46/315 (14%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y+KA  +  ++  ++  KG      G+ E+A   +   ++   D V +   +    +N G
Sbjct: 104 YDKAIELKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIG 163

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            Y +S+  Y++A+++ P     I    G   + LGQ  +A +A+ +A++L+P +   +  
Sbjct: 164 EYEESIIAYEKAIELKPD-DADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPNDAVVI-- 220

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
                   N        +EK + A + Y   A+ LN                        
Sbjct: 221 --------NNKGTSLSDLEKYEEAIKCYN-QAIELN------------------------ 247

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
                P  + SYYN   S++  G YE+A   Y  ++K   KP +++  YY  G     +G
Sbjct: 248 -----PNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKL--KP-DYVESYYNKGISLYNIG 299

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           ++  ++  +EK +E+ PD+ +     G     LG+ E+A +   K+ ++ P  A A  + 
Sbjct: 300 EYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGEYEEAIKAYNKSIELKPDFAVAINN- 358

Query: 372 GELLISSDTGAALDA 386
              ++    G+A DA
Sbjct: 359 -RTIVIEKLGSAGDA 372



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 154/377 (40%), Gaps = 76/377 (20%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
           RGRY ++++ Y +A+++ P     +    G     LG+  +A + + +++ L+PE     
Sbjct: 26  RGRYEEAIKEYNKAIKLKPD-EDVLYYKKGNSLAFLGRYEEAIECYDKSISLNPE----- 79

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
                                            A A N   N FF   ++   E L E  
Sbjct: 80  --------------------------------YADAYNNKGNSFFDLEKY--EEALVEYD 105

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
            A+    P  + SYYN   S++  G YE+A   Y  ++K   KP +++  YY  G     
Sbjct: 106 KAIE-LKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKL--KP-DYVESYYNKGISLYN 161

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           +G++  ++  +EK +E+ PD+ +     G     LGQ E+A +   KA +++P DA    
Sbjct: 162 IGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPNDAVVIN 221

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFK 427
           + G  L  SD    L+ ++ A     +A E  P +  +  N G   ++ G++E A + + 
Sbjct: 222 NKGTSL--SD----LEKYEEAIKCYNQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYN 275

Query: 428 DAL-----------GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
            A+             GI L  +    ++ +    A  L+  D  +++            
Sbjct: 276 KAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYN------------ 323

Query: 477 WNKVTVLFNLARLLEQI 493
            NK T LFNL    E I
Sbjct: 324 -NKGTSLFNLGEYEEAI 339



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/365 (21%), Positives = 146/365 (40%), Gaps = 52/365 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + YNKA ++   E   +  KG  L   G  E+A   +   +  + +   A   +    
Sbjct: 32  AIKEYNKAIKLKPDEDVLYYKKGNSLAFLGRYEEAIECYDKSISLNPEYADAYNNKGNSF 91

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           F+  +Y ++L  Y +A+++ P+         G   YKLG+  +A + + +A++L P+ VE
Sbjct: 92  FDLEKYEEALVEYDKAIELKPN-DACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVE 150

Query: 188 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           +     +++ ++   E + I       ++A E+ P  A   N      F  GQ+   E+ 
Sbjct: 151 SYYNKGISLYNIGEYEESIIA-----YEKAIELKPDDADIYNNKGTSLFNLGQY---EEA 202

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            +         P  +    N   S      YE+A   Y  ++ E+N P++    YY  G 
Sbjct: 203 IKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAI-ELN-PNDAC-SYYNKGN 259

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
              KLG +  A+  + K +++ PD  E+    G     +G+ E++     KA ++ P DA
Sbjct: 260 SFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDA 319

Query: 366 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
                                                 ++ NN G   F  GE+E A ++
Sbjct: 320 --------------------------------------DIYNNKGTSLFNLGEYEEAIKA 341

Query: 426 FKDAL 430
           +  ++
Sbjct: 342 YNKSI 346



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 111/262 (42%), Gaps = 44/262 (16%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + YNKA ++      ++  KG  L   GE E++  A++  +E   D+      +    
Sbjct: 134 AIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSL 193

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           FN G+Y ++++ Y +A++++P+    I    G     L +  +A + + +A++L+P +  
Sbjct: 194 FNLGQYEEAIKAYNKAIELNPNDAVVIN-NKGTSLSDLEKYEEAIKCYNQAIELNPNDA- 251

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                          +   KG                      N F+  G++   E + E
Sbjct: 252 --------------CSYYNKG----------------------NSFYKLGKY--EEAIKE 273

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
              A+    P    SYYN   S ++ G+YE++ + Y  +++   KP +    Y   G   
Sbjct: 274 YNKAIK-LKPDYVESYYNKGISLYNIGEYEESIIAYEKAIEL--KPDDADI-YNNKGTSL 329

Query: 308 LKLGDFRSALTNFEKVLEIYPD 329
             LG++  A+  + K +E+ PD
Sbjct: 330 FNLGEYEEAIKAYNKSIELKPD 351



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           E +  A + YN+A  ++ ++  ++  KG      G+ E+A   +   ++   D V +   
Sbjct: 231 EKYEEAIKCYNQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYN 290

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +    +N G Y +S+  Y++A+++ P     I    G   + LG+  +A +A+ ++++L 
Sbjct: 291 KGISLYNIGEYEESIIAYEKAIELKPD-DADIYNNKGTSLFNLGEYEEAIKAYNKSIELK 349

Query: 183 PE 184
           P+
Sbjct: 350 PD 351


>gi|118385554|ref|XP_001025906.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89307673|gb|EAS05661.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1032

 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 92/405 (22%), Positives = 180/405 (44%), Gaps = 64/405 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD-RDNVPAL-LGQAC 125
           A + Y K+  I+  +   + G G     KG V++A  +++  LE + +D++    LG A 
Sbjct: 493 AIKSYQKSIEINPKDDDYYNGLGSAYKEKGLVDEAIKSYQKCLEINPKDDIYNYNLGNAY 552

Query: 126 VEFNRGRYSDSLEFYKRALQVHP---SCPGAIRLGIGLCRYKL-GQLGKARQAFQRALQL 181
            +  +G   ++++ Y+++++++P   SC     LGI    YKL G L +A +++Q+ L++
Sbjct: 553 DD--KGLLDEAIKSYQKSIEINPKNDSC--YYNLGIA---YKLKGLLDEAIKSYQKCLEI 605

Query: 182 DPENVEALVALAV------------------MDLQANE------------AAGI-RKGME 210
           +P+N      L +                  +++  N+            A G+  + ++
Sbjct: 606 NPKNDSCYYNLGIAYKEKGLLDEAIKSYQKSIEINPNDDDYYKGLGNAYKAKGLLDQAIK 665

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
             Q+  EI P   +    L N +   G   L+++  ++        P     YY+L  +Y
Sbjct: 666 SYQKCLEINPNNDICYYNLGNTYKEIG---LLDETIKSYQKSIEINPKDDDYYYSLGSAY 722

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
             KG  ++A   Y   + EIN   +    YY LG+     G    A+T+++K +EI P +
Sbjct: 723 DDKGLLDEAIKSYQKCL-EINPKDDIC--YYNLGKAYKSKGLLDEAITSYQKSIEINPKD 779

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
            +   +LG  Y   G +++A +  +   +I+P D   + +LG      + G   +A ++ 
Sbjct: 780 DDCYNSLGSAYDDKGLLDEAIQSYQNCLEINPMDDSCYYNLGNTY--KEKGLLDEAIRSY 837

Query: 391 RTLLKKAGEEVPIEVLN-----NIGVIHFEKGEFESAHQSFKDAL 430
           +       E + I   N     N+G+    KG  + A QS++  L
Sbjct: 838 Q-------ESIEINPENDSCYYNLGIACKSKGLLDKAIQSYQKCL 875



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 168/373 (45%), Gaps = 32/373 (8%)

Query: 11   VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQ 70
            ++ +++ LE   + +I  Y     Y+ I +L+      +Y   IE   ++ + ++ L + 
Sbjct: 664  IKSYQKCLEINPNNDICYYNLGNTYKEIGLLDE--TIKSYQKSIEINPKDDDYYYSLGSA 721

Query: 71   Y------------YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR--DN 116
            Y            Y K   I+  +   +   G+   +KG +++A ++++  +E +   D+
Sbjct: 722  YDDKGLLDEAIKSYQKCLEINPKDDICYYNLGKAYKSKGLLDEAITSYQKSIEINPKDDD 781

Query: 117  VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 176
                LG A  +  +G   ++++ Y+  L+++P    +    +G    + G L +A +++Q
Sbjct: 782  CYNSLGSAYDD--KGLLDEAIQSYQNCLEINPM-DDSCYYNLGNTYKEKGLLDEAIRSYQ 838

Query: 177  RALQLDPENVEALVALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
             +++++PEN      L +    A ++ G+  K ++  Q+  EI+P        L   +  
Sbjct: 839  ESIEINPENDSCYYNLGI----ACKSKGLLDKAIQSYQKCLEIHPKNDSCYYNLGKAYKS 894

Query: 236  TGQHFLVEQLTETALAVTNHGPTKSHSYYN-LARSYHSKGDYEKAGLYYMASVKEINKPH 294
             G   LV++  ++  +     P K  +YYN L  +Y  KG  ++A   Y   +K IN  +
Sbjct: 895  KG---LVDEAIKSYQSSIEINP-KVDAYYNSLGNAYKVKGLLDEAIKSYQNCLK-INPNY 949

Query: 295  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
                 YY LGQ     G    A+ +++K LEI P N      LG  Y   G +++A +  
Sbjct: 950  NSC--YYKLGQAYKSKGLLDEAIKSYQKYLEINPKNDSCYYNLGLAYKSKGLLDEAIKSY 1007

Query: 355  RKAAKIDPRDAQA 367
            +K   ++P +   
Sbjct: 1008 QKCLSLNPNNKNC 1020



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 143/318 (44%), Gaps = 16/318 (5%)

Query: 58  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD-RDN 116
           ++ K+  + L+ Q+ N   +I     + W   G        + +A  +++  LE + +D+
Sbjct: 313 EKMKDSQWYLSYQFINICCQIQQKNETYWFYLGYTQHQLNFLSEAIKSYQKCLEINPKDD 372

Query: 117 VPAL-LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           +    LG+A  E  +    ++++ Y+++++++P        G+G        L +A +++
Sbjct: 373 ICYYNLGKAYKE--KDLLDEAIKSYQKSIEINPKDDDYYN-GLGSAYRAKSLLDEAIKSY 429

Query: 176 QRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           Q+ L+++P+N      L      A +  G + + ++  Q+  EI P   +    L N   
Sbjct: 430 QKCLEINPKNDSCFYNLG----NAYDDKGLLDEAIKSYQKCLEINPKDDICYYNLGNT-- 483

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
              +  L+++  ++        P     Y  L  +Y  KG  ++A   Y   + EIN P 
Sbjct: 484 -QKEKGLLDEAIKSYQKSIEINPKDDDYYNGLGSAYKEKGLVDEAIKSYQKCL-EIN-PK 540

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           + I+  Y LG      G    A+ +++K +EI P N      LG  Y   G +++A +  
Sbjct: 541 DDIYN-YNLGNAYDDKGLLDEAIKSYQKSIEINPKNDSCYYNLGIAYKLKGLLDEAIKSY 599

Query: 355 RKAAKIDPRDAQAFIDLG 372
           +K  +I+P++   + +LG
Sbjct: 600 QKCLEINPKNDSCYYNLG 617



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 21/208 (10%)

Query: 232 HFFFTG--QH---FLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
           ++F+ G  QH   FL E +   +  L +    P     YYNL ++Y  K   ++A   Y 
Sbjct: 340 YWFYLGYTQHQLNFLSEAIKSYQKCLEIN---PKDDICYYNLGKAYKEKDLLDEAIKSYQ 396

Query: 285 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
            S+ EIN P +  + Y GLG           A+ +++K LEI P N      LG+ Y   
Sbjct: 397 KSI-EIN-PKDDDY-YNGLGSAYRAKSLLDEAIKSYQKCLEINPKNDSCFYNLGNAYDDK 453

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI- 403
           G +++A +  +K  +I+P+D   + +LG      + G   +A K+ +    K+ E  P  
Sbjct: 454 GLLDEAIKSYQKCLEINPKDDICYYNLGN--TQKEKGLLDEAIKSYQ----KSIEINPKD 507

Query: 404 -EVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +  N +G  + EKG  + A +S++  L
Sbjct: 508 DDYYNGLGSAYKEKGLVDEAIKSYQKCL 535


>gi|224534068|ref|ZP_03674651.1| TPR domain protein [Borrelia burgdorferi CA-11.2a]
 gi|225548538|ref|ZP_03769586.1| TPR domain protein [Borrelia burgdorferi 94a]
 gi|387827111|ref|YP_005806393.1| TPR domain-containing protein [Borrelia burgdorferi N40]
 gi|224512767|gb|EEF83135.1| TPR domain protein [Borrelia burgdorferi CA-11.2a]
 gi|225370801|gb|EEH00236.1| TPR domain protein [Borrelia burgdorferi 94a]
 gi|312149253|gb|ADQ29324.1| TPR domain protein [Borrelia burgdorferi N40]
          Length = 379

 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|72382794|ref|YP_292149.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002644|gb|AAZ58446.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 637

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 23/336 (6%)

Query: 240 FLVEQLTETALAVTNHGPTKS--HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
           F +E++ E     TN  P+K       N A  +HS+G+  +A  YY   + +    H  I
Sbjct: 24  FALEEIKENISIFTN-TPSKPSKEEIINQAFKFHSQGNISEAAKYYQYLINQGFNDHR-I 81

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           F  YG+  +   LG  + A  + +K +EI PD  E    LG+I   L ++++A+  LRKA
Sbjct: 82  FSNYGI--ILKSLGKLKEAELSTQKAIEIKPDFAEMHSNLGNILRDLDKLKEAEISLRKA 139

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFE 415
            +I P  A+A+ +LG +L   D G      K A    +KA E  P   +   N+G +  +
Sbjct: 140 IEIKPNYAEAYYNLGNIL--KDLGK----LKEAEISYRKAIEIKPDYAKAHYNLGNLLKD 193

Query: 416 KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 475
            G+ + A  S+  A+G    +    +K  + + +    +   ++ ++ +R       +EL
Sbjct: 194 NGKLKEAELSYLKAIG----IKPDYAKAHSNLGNLLRELGNLQEAEMSYR-----KAIEL 244

Query: 476 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
                   +NL  LL+++ +   A + YR  +    DY +A+  L  + +   NLQ +  
Sbjct: 245 NPTFAEAHYNLGNLLKELGNLQEAEMSYRKAIEIKPDYAEAHSNLGNLLRELGNLQEAEM 304

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 571
              +A+++   Y  A   L  +EL   D++   E +
Sbjct: 305 SYRKAIEIKPDYAEAFWNLSLVELLQGDYINGLENY 340



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 14/233 (6%)

Query: 141 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQ 198
           ++A+++ P     +   +G     L +L +A  + ++A+++ P   EA   L   + DL 
Sbjct: 103 QKAIEIKPDF-AEMHSNLGNILRDLDKLKEAEISLRKAIEIKPNYAEAYYNLGNILKDLG 161

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 258
             + A I       ++A EI P  A A   L N     G+   +++   + L      P 
Sbjct: 162 KLKEAEI-----SYRKAIEIKPDYAKAHYNLGNLLKDNGK---LKEAELSYLKAIGIKPD 213

Query: 259 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
            + ++ NL       G+ ++A + Y  ++ E+N    F   +Y LG +  +LG+ + A  
Sbjct: 214 YAKAHSNLGNLLRELGNLQEAEMSYRKAI-ELNPT--FAEAHYNLGNLLKELGNLQEAEM 270

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           ++ K +EI PD  E    LG++  +LG +++A+   RKA +I P  A+AF +L
Sbjct: 271 SYRKAIEIKPDYAEAHSNLGNLLRELGNLQEAEMSYRKAIEIKPDYAEAFWNL 323


>gi|216264688|ref|ZP_03436680.1| TPR domain protein [Borrelia burgdorferi 156a]
 gi|221217520|ref|ZP_03588990.1| TPR domain protein [Borrelia burgdorferi 72a]
 gi|225549782|ref|ZP_03770746.1| TPR domain protein [Borrelia burgdorferi 118a]
 gi|226320896|ref|ZP_03796447.1| TPR domain protein [Borrelia burgdorferi 29805]
 gi|215981161|gb|EEC21968.1| TPR domain protein [Borrelia burgdorferi 156a]
 gi|221192583|gb|EEE18800.1| TPR domain protein [Borrelia burgdorferi 72a]
 gi|225369590|gb|EEG99039.1| TPR domain protein [Borrelia burgdorferi 118a]
 gi|226233668|gb|EEH32398.1| TPR domain protein [Borrelia burgdorferi 29805]
          Length = 379

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 2/96 (2%)

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
           E +   +K  L+ D D + A+LG A ++  +G+Y ++L   K  ++ +P    A+ +   
Sbjct: 281 ENSQIYYKKALDVDFD-MFAILGLALIQKEQGKYEEALIAIKSLIKNNPK-NSALYVNAA 338

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
            C   LGQ+G A       LQL  +N+  +  LAV+
Sbjct: 339 ECYEALGQIGNAVDILSSFLQLGMKNIVVIDYLAVL 374


>gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
 gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
          Length = 400

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 130/306 (42%), Gaps = 48/306 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y KA  +    P+ W GK   L   G  E+A  A++ VLE   D   A  G+    
Sbjct: 140 AVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAVEAYEKVLEESPDYKEAWAGKGIAL 199

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GRY +++  Y +A+++ P    A     G+    LG   +A +A+++A++LDPEN +
Sbjct: 200 GQMGRYDEAIIAYDKAIEIDPGFLEAWYYK-GVDLDSLGSHRQALKAYEKAVELDPENDD 258

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A   + + DL+          +EK + A   +   A+A+N                  +E
Sbjct: 259 AWNNMGI-DLE---------NLEKYEEAINAFD-KAIAIN------------------SE 289

Query: 248 TALAVTNHGPTKS--HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            +    N G T S  H +     +Y                 K      E++  Y  LG 
Sbjct: 290 NSDVWYNKGFTLSQMHRFEEAVEAYR----------------KATQLDPEYLEAYTSLGF 333

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
           V  +L +F  AL  +EK LE+     ++          LG+ E+A++  RKA +IDPR A
Sbjct: 334 VLAQLKNFEEALETYEKALELDQGAADSWFGKAVCLSFLGREEEAEDAYRKAVEIDPRYA 393

Query: 366 QAFIDL 371
           +   D+
Sbjct: 394 EIGGDI 399



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 130/292 (44%), Gaps = 22/292 (7%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  LL  G+  +A  AF   +E D  N+  L  +A    + GR+ ++L+ Y++A++++ S
Sbjct: 60  GLDLLKLGKFNEAIIAFDKAIEKDPKNIYLLNNKAAALESFGRFEEALKLYQKAVEIN-S 118

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
               +   +     ++G+  +A +A+ +AL+L P+   A    A   L  ++A    + +
Sbjct: 119 EDADLWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKA---LNLSQAGSYEEAV 175

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSY 263
           E  ++  E  P    A         + G+   + Q+     A+  +       P    ++
Sbjct: 176 EAYEKVLEESPDYKEA---------WAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAW 226

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           Y       S G + +A   Y  +V E++  ++  +   G+    L+   +  A+  F+K 
Sbjct: 227 YYKGVDLDSLGSHRQALKAYEKAV-ELDPENDDAWNNMGIDLENLE--KYEEAINAFDKA 283

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           + I  +N +     G    Q+ + E+A E  RKA ++DP   +A+  LG +L
Sbjct: 284 IAINSENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLEAYTSLGFVL 335


>gi|449105250|ref|ZP_21741955.1| hypothetical protein HMPREF9729_00220 [Treponema denticola ASLM]
 gi|449124143|ref|ZP_21760462.1| hypothetical protein HMPREF9723_00506 [Treponema denticola OTK]
 gi|451969556|ref|ZP_21922785.1| hypothetical protein HMPREF9728_01987 [Treponema denticola US-Trep]
 gi|448942474|gb|EMB23368.1| hypothetical protein HMPREF9723_00506 [Treponema denticola OTK]
 gi|448967237|gb|EMB47878.1| hypothetical protein HMPREF9729_00220 [Treponema denticola ASLM]
 gi|451701653|gb|EMD56114.1| hypothetical protein HMPREF9728_01987 [Treponema denticola US-Trep]
          Length = 415

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 213 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 268
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|15594540|ref|NP_212329.1| cell division control protein 27 [Borrelia burgdorferi B31]
 gi|218249485|ref|YP_002374723.1| hypothetical protein BbuZS7_0195 [Borrelia burgdorferi ZS7]
 gi|223889253|ref|ZP_03623841.1| TPR domain protein [Borrelia burgdorferi 64b]
 gi|226321513|ref|ZP_03797039.1| TPR domain protein [Borrelia burgdorferi Bol26]
 gi|387825849|ref|YP_005805302.1| TPR domain-containing protein [Borrelia burgdorferi JD1]
 gi|2688072|gb|AAC66569.1| TPR domain protein [Borrelia burgdorferi B31]
 gi|218164673|gb|ACK74734.1| TPR domain protein [Borrelia burgdorferi ZS7]
 gi|223885286|gb|EEF56388.1| TPR domain protein [Borrelia burgdorferi 64b]
 gi|226232702|gb|EEH31455.1| TPR domain protein [Borrelia burgdorferi Bol26]
 gi|312147863|gb|ADQ30522.1| TPR domain protein [Borrelia burgdorferi JD1]
          Length = 379

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELIPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 2/96 (2%)

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
           E +   +K  L+ D D + A+LG A ++  +G+Y ++L   K  ++ +P    A+ +   
Sbjct: 281 ENSQIYYKKALDVDFD-MFAILGLALIQKEQGKYEEALIAIKSLIKNNPK-NSALYVNAA 338

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
            C   LGQ+G A       LQL  +N+  +  LAV+
Sbjct: 339 ECYEALGQIGNAVDILSSFLQLGMKNIVVIDYLAVL 374


>gi|449116347|ref|ZP_21752798.1| hypothetical protein HMPREF9726_00783 [Treponema denticola H-22]
 gi|448954234|gb|EMB35017.1| hypothetical protein HMPREF9726_00783 [Treponema denticola H-22]
          Length = 415

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 213 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 268
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|159028674|emb|CAO88145.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 837

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 137/316 (43%), Gaps = 30/316 (9%)

Query: 63  EHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           E +  A   Y++A  I  D HE   W  +G  L   G +E+A +++   LE   D   A 
Sbjct: 486 EQYQEAIASYDRALEIKPDYHE--AWYNRGIALDDLGRLEEAIASYDRALEIKPDKHEAW 543

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
             +     N GR+  ++  Y RAL++ P    A     G     LG+  +A  ++ RAL+
Sbjct: 544 YNRGFALGNLGRFEQAIASYDRALEIKPDKHEAW-YNRGFALGNLGRFEQAIASYDRALE 602

Query: 181 LDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           + P+  EA      A+ +L   E A     +    RA EI P          +H  +  +
Sbjct: 603 IKPDKHEAWYNRGFALGNLGRFEQA-----IASYDRALEIKP---------DDHEAWNNR 648

Query: 239 HFLVEQL--TETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
              ++ L   E A+A  +      P K  ++YN   +  + G +E+A   Y  +++    
Sbjct: 649 GIALDDLGRLEEAIASFDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPD 708

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
            HE    +Y  G     LG F  A+ ++++ LEI PD+ E     G     LG+ E+A  
Sbjct: 709 KHE---AWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALGNLGRFEEAIA 765

Query: 353 LLRKAAKIDPRDAQAF 368
              +A KI+  DA A+
Sbjct: 766 SFDRAIKINSNDADAY 781



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 170/447 (38%), Gaps = 67/447 (14%)

Query: 117 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP-GAIRLGIGLCRYKLGQLGKARQAF 175
           +P+L G     +   RY D+L+ + R +   P    G    G       L Q  +A  ++
Sbjct: 438 LPSLAGFTLKLYELKRYQDALKGFNRLVSFAPQWEDGWFYRGTTFG--YLEQYQEAIASY 495

Query: 176 QRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
            RAL++ P+  EA     +A+ DL   E A     +    RA EI P    A     N  
Sbjct: 496 DRALEIKPDYHEAWYNRGIALDDLGRLEEA-----IASYDRALEIKPDKHEA---WYNRG 547

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
           F  G     EQ   +        P K  ++YN   +  + G +E+A   Y  +++     
Sbjct: 548 FALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDK 607

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
           HE    +Y  G     LG F  A+ ++++ LEI PD+ E     G     LG++E+A   
Sbjct: 608 HE---AWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIAS 664

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGV 411
             +A +I P   +A+ + G  L        L  F+ A     +A E  P   E   N G 
Sbjct: 665 FDRALEIKPDKHEAWYNRGFAL------GNLGRFEQAIASYDRALEIKPDKHEAWYNRGF 718

Query: 412 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
                G FE A  S+  AL                        ++  D + ++       
Sbjct: 719 ALGNLGRFEQAIASYDRAL-----------------------EIKPDDHEAWN------- 748

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
                 N+   L NL R  E I      +   R I     D  DAY   A     +NN++
Sbjct: 749 ------NRGIALGNLGRFEEAI------ASFDRAIKINSND-ADAYYNKACCYGLQNNVE 795

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLE 558
           L+IE +  A+ ++ KY +      D E
Sbjct: 796 LAIENLQRAINLDVKYQDMAKTDKDFE 822


>gi|269925204|ref|YP_003321827.1| hypothetical protein Tter_0083 [Thermobaculum terrenum ATCC BAA-798]
 gi|269788864|gb|ACZ41005.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC
            BAA-798]
          Length = 2240

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 163/758 (21%), Positives = 309/758 (40%), Gaps = 105/758 (13%)

Query: 44   LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
            LG+ Y  LG  E            A +++  A  +D   P     K ++ LA   +++ +
Sbjct: 1183 LGMLYMDLGLQEK-----------ALRHHEIACSLDDRSPEY---KYRMALALIHLKRYA 1228

Query: 104  SAFKIVLEADRDNVPAL-----LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
             A   +L A + N  A      LG+A +  ++  Y ++++ +++A+++ PS     R  +
Sbjct: 1229 EAIDTILTAIQANPEAAEYYHALGRAHMGLSQ--YEEAVQAFEKAVRIAPSVAQYHR-DL 1285

Query: 159  GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ-ANEAAG-IRKGMEKMQRAF 216
            G+    + + G A Q  + A+++ P+     VA    DL    E  G + + ++  ++A 
Sbjct: 1286 GIAYRSISEYGAACQEIEEAVRISPD-----VAAWYNDLGICYERRGWLHEAVQAFEKAI 1340

Query: 217  EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
            E+ P   + L+   N      +H L  Q  + A+ + ++    +  Y+ +A      G +
Sbjct: 1341 ELQPGEPVYLSNAGNVLRQQRKHDLALQHLQKAIELDSNF---AEPYHQMALVMQDMGRF 1397

Query: 277  EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            + A   +  S+        +   +Y LG +    GD   A+    K ++I P+N E    
Sbjct: 1398 DDAYDLFQRSISLSPDNPRY---HYNLGILMRSQGDLHDAINQVSKAIDIQPNNAEWHST 1454

Query: 337  LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 396
            L  +Y Q+G ++KA++   +A+++DP + +    L   +I+ +T     A  +AR  LK 
Sbjct: 1455 LADLYFQIGMLDKARKEAEEASRLDPDNYRYHRQLS--VIARETQDLDQALASARQALKC 1512

Query: 397  AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
            A +E   + +  +  +    GE  SA   +K A        +LD     Y     +   Q
Sbjct: 1513 APDEP--QAIAELASVQEALGELTSALALYKQA-------AMLDPLNADYHRKIGSIYRQ 1563

Query: 457  FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH-----------------DTVAA 499
                Q     ++    ++L  N    LF + +L  Q                   D    
Sbjct: 1564 LGKTQ--ESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDRFDEACKVLQKATQLAPDNPTY 1621

Query: 500  SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL--SIELVNEALKVNGKYPNALSMLGDL 557
               Y L + + ++  D  LR A +  + + +    +IE +  AL++   + +  + LG+L
Sbjct: 1622 RFHYGLAIMRLKEREDK-LRSARLLASSSQVSYAQAIEEIEAALRIEHNHADWHNTLGEL 1680

Query: 558  ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW--------NYFAALRNEKRAPKLEA 609
                DD+  A   FR A+D     DS   L   N         +Y  A+R  + A +L+ 
Sbjct: 1681 YELVDDYESALHHFRWAADI----DSDCALFQYNQGRIYKKLRDYDRAIRAFQMAVRLDP 1736

Query: 610  THLEKAKEL---------YTRVIVQHTSNLYAANGAGVVLAEKG----QFDVSKDLFTQV 656
               +   EL         ++  ++ +   L      G+ L   G    Q    KD  + +
Sbjct: 1737 EFAQAYSELGATYNMVGNHSEALINYERALQIRPDDGLTLRRLGSTYRQMKRFKDAISIL 1796

Query: 657  QEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR----KFYYNTDAQILLYLA 712
            Q+AA   +  Q P+++  L   Y AQG    A+  +++ L+       YN +A I     
Sbjct: 1797 QKAA--EIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRNAAI----- 1849

Query: 713  RTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 750
              H + +Q +   + L  A+ L P   T  F+ G  ++
Sbjct: 1850 -AHQDLKQTKLAIEKLQHAVMLEPYQPTWHFELGALLE 1886



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 122/315 (38%), Gaps = 44/315 (13%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           E++    LA   Y KA+ I   EP      G +L   G VE+A       +E D     A
Sbjct: 644 ERQGKLDLALANYQKATEIQPEEPLYHRNAGAILRKLGRVEEAERELVTAIELDSKYADA 703

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
                 +  + G++  +LE +++A+Q  P  P    L +GL    L Q  KA  A Q AL
Sbjct: 704 YNELGSLYMDMGKHLAALENFQKAIQYSPEQP-EYYLQMGLTYRALKQPAKAITALQIAL 762

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            +DP+++     LA    Q+     + + +E+ + A E+         YL N      + 
Sbjct: 763 SMDPKDLNKRAILAETYCQSGR---LTEAIEEYRWAIEL---SGGMPQYLLNAAIVQRKA 816

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
            ++E   E+   V  + P  + +Y+ L                                 
Sbjct: 817 GMLEDAEESLKKVIQNNPGLAPAYFEL--------------------------------- 843

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
               G V  + GD+  AL  + K LE+ PDN   + A+       G + +A EL+R A  
Sbjct: 844 ----GMVAEQKGDYILALERYRKALELSPDNEHFIVAVSRSARLSGNLLQADELIRDAFS 899

Query: 360 IDPRDAQAFIDLGEL 374
             P  A    +LG +
Sbjct: 900 RMPESALIHDELGTI 914



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 31/350 (8%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVP--ALLGQACVEFNRGRYSDSLEFYKRALQVH 147
           G++  A+G+ E A   +++ +E D  NV      G A    N  +Y  +    +  + + 
Sbjct: 503 GKIHEAEGKYELACQQYELAVERDPSNVNYRRSFGLALALCN--KYDLAAAKLREVVDIL 560

Query: 148 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 207
            S     +  +G      G+L +A + FQ A  + P +   L +L  +      A G  +
Sbjct: 561 KSDCALTQHELGNIYKIQGRLQQALEQFQDAATMSPSSAVYLTSLGSV----LAACGDDQ 616

Query: 208 GMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH------GPTKS 260
           G E+ ++RA ++ P  A A N LA          ++E+  +  LA+ N+       P + 
Sbjct: 617 GAERELRRALDLDPNYAPAANELAA---------VLERQGKLDLALANYQKATEIQPEEP 667

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
             + N        G  E+A    + +++  +K   +   Y  LG + + +G   +AL NF
Sbjct: 668 LYHRNAGAILRKLGRVEEAERELVTAIELDSK---YADAYNELGSLYMDMGKHLAALENF 724

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
           +K ++  P+  E    +G  Y  L Q  KA   L+ A  +DP+D      L E    S  
Sbjct: 725 QKAIQYSPEQPEYYLQMGLTYRALKQPAKAITALQIALSMDPKDLNKRAILAETYCQS-- 782

Query: 381 GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           G   +A +  R  ++ +G  +P + L N  ++  + G  E A +S K  +
Sbjct: 783 GRLTEAIEEYRWAIELSG-GMP-QYLLNAAIVQRKAGMLEDAEESLKKVI 830



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 145/358 (40%), Gaps = 49/358 (13%)

Query: 132  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV--EAL 189
            R+ D++   ++A ++ P  P  I   +GL     G+  +A   F+ AL+L P+N      
Sbjct: 1788 RFKDAISILQKAAEIDPQDP-EIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRN 1846

Query: 190  VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
             A+A  DL+  + A     +EK+Q A  + PY            F  G      +  E A
Sbjct: 1847 AAIAHQDLKQTKLA-----IEKLQHAVMLEPYQP-------TWHFELGALLEASEQYEEA 1894

Query: 250  LAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            LA  N      P  +   +  A      G  E+A      ++K   + +E+ F    LG 
Sbjct: 1895 LAEYNEAMQLNPDGAIYAFRAAEVCERMGKKEEAIECLKYALKLEPRNYEWRFK---LGC 1951

Query: 306  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP--- 362
            + L +  F  A     K LEI P++ E    LG   + L Q ++A E L  AAKI+P   
Sbjct: 1952 MYLDMEYFAPAAEELAKSLEIEPESAEAHLKLGIALINLEQYDQALERLMDAAKIEPNNF 2011

Query: 363  --------------RDAQAFIDLGELLISSDTGAALDAFKTARTL------LKKAGE--E 400
                          R  +A   + + L+   + A  D ++ A  L      L++A +  E
Sbjct: 2012 DVHEQLSLVMEKLGRPEEAISHIAQALLLDSSRA--DLYRRAGKLYADMDRLEEAAQALE 2069

Query: 401  VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
              +E+  +    H E G    A +  K ALG+      LD K   Y + A++   Q +
Sbjct: 2070 KALELDPDDAETHSELGLIYEAQEKLKLALGEQKEAIRLDPKNPIYELRAASICRQLR 2127



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 157/410 (38%), Gaps = 74/410 (18%)

Query: 23   SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHE 82
            SPE  +++A            LG  Y YL +++  +   EE           A R+D + 
Sbjct: 935  SPETSDFWAH-----------LGKAYRYLTRLDEAKEACEE-----------ALRLDANN 972

Query: 83   PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 142
            P        LL+A  E E+A S F+     D  N    L         GR ++ L + ++
Sbjct: 973  PVAHHETAMLLIALNEEEEALSHFRKAARLDARNAQYALDLGACASKLGRVNEGLTWLEK 1032

Query: 143  ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 202
            AL + P+  G     +G+     GQ  +A   F+ +L +D +NV+ L    +  L  +  
Sbjct: 1033 ALSLDPN-NGQAHAELGMLMGSRGQWEEALAHFRASLLIDEQNVDYLHMYGIACLHTDAT 1091

Query: 203  AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
                K +E+           A+AL+                             P ++  
Sbjct: 1092 EDAIKTLER-----------ALALD-----------------------------PRRADV 1111

Query: 263  YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFE 321
            Y   A +    G  ++A    + +++E  +  +    Y   LG +  + G+++ A     
Sbjct: 1112 YVTYAEALEIAGKRDEA----IQNLQEAVRLDDTNVSYKVKLGSMLRRYGEYQDAEDLLL 1167

Query: 322  KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
            K  + +P++ +    LG +Y+ LG  EKA      A  +D R  +    +   LI     
Sbjct: 1168 KCTDDHPESAQAHSELGMLYMDLGLQEKALRHHEIACSLDDRSPEYKYRMALALIHLKRY 1227

Query: 382  A-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            A A+D   TA     +A      E  + +G  H    ++E A Q+F+ A+
Sbjct: 1228 AEAIDTILTAIQANPEAA-----EYYHALGRAHMGLSQYEEAVQAFEKAV 1272



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 14/249 (5%)

Query: 131  GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
            G +S++L  Y+RALQ+ P     +R  +G    ++ +   A    Q+A ++DP++ E   
Sbjct: 1753 GNHSEALINYERALQIRPDDGLTLR-RLGSTYRQMKRFKDAISILQKAAEIDPQDPEIYN 1811

Query: 191  ALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAM-ALNYLANHFFFTGQHFLVEQLTET 248
             L +    A  A G  R+ + + + A ++ P  A    N    H         +E+L + 
Sbjct: 1812 ELGL----AYRAQGKHREALAEFEHALKLRPDNATYNRNAAIAHQDLKQTKLAIEKL-QH 1866

Query: 249  ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
            A+ +  + PT    ++ L     +   YE+A   Y  ++ ++N P   I+ +    +V  
Sbjct: 1867 AVMLEPYQPT---WHFELGALLEASEQYEEALAEYNEAM-QLN-PDGAIYAFRA-AEVCE 1920

Query: 309  KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
            ++G    A+   +  L++ P N E    LG +Y+ +     A E L K+ +I+P  A+A 
Sbjct: 1921 RMGKKEEAIECLKYALKLEPRNYEWRFKLGCMYLDMEYFAPAAEELAKSLEIEPESAEAH 1980

Query: 369  IDLGELLIS 377
            + LG  LI+
Sbjct: 1981 LKLGIALIN 1989



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 105/459 (22%), Positives = 187/459 (40%), Gaps = 72/459 (15%)

Query: 163 YKLGQL----GK---ARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEK 211
           Y+LG++    GK   A Q ++ A++ DP NV       +ALA+ +     AA +R+ ++ 
Sbjct: 500 YQLGKIHEAEGKYELACQQYELAVERDPSNVNYRRSFGLALALCNKYDLAAAKLREVVDI 559

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
           ++        CA+  + L N +   G+   ++Q  E         P+ +    +L     
Sbjct: 560 LKSD------CALTQHELGNIYKIQGR---LQQALEQFQDAATMSPSSAVYLTSLGSVLA 610

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEI 326
           + GD + A        +E+ +  + + P Y      L  V  + G    AL N++K  EI
Sbjct: 611 ACGDDQGAE-------RELRRALD-LDPNYAPAANELAAVLERQGKLDLALANYQKATEI 662

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AA 383
            P+     +  G I  +LG++E+A+  L  A ++D + A A+ +LG L +  D G   AA
Sbjct: 663 QPEEPLYHRNAGAILRKLGRVEEAERELVTAIELDSKYADAYNELGSLYM--DMGKHLAA 720

Query: 384 LDAFKTA------------------RTLLKKAGEEVPIEVLNNIGVIHFEKGEF--ESAH 423
           L+ F+ A                  R L + A     +++  ++      K     E+  
Sbjct: 721 LENFQKAIQYSPEQPEYYLQMGLTYRALKQPAKAITALQIALSMDPKDLNKRAILAETYC 780

Query: 424 QS--FKDALGDGIWLTLLDSKTKTYVIDAS-----ASMLQFKDMQLFHRFENDGNHVELP 476
           QS    +A+ +  W   L      Y+++A+     A ML+  +  L    +N+       
Sbjct: 781 QSGRLTEAIEEYRWAIELSGGMPQYLLNAAIVQRKAGMLEDAEESLKKVIQNNP------ 834

Query: 477 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
                  F L  + EQ  D + A   YR  L    D     + ++  A+   NL  + EL
Sbjct: 835 -GLAPAYFELGMVAEQKGDYILALERYRKALELSPDNEHFIVAVSRSARLSGNLLQADEL 893

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS 575
           + +A     +       LG +E    ++ KA E F  A+
Sbjct: 894 IRDAFSRMPESALIHDELGTIEFVRGNYQKASECFLKAT 932



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 69/324 (21%), Positives = 128/324 (39%), Gaps = 48/324 (14%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A     KA+ ID  +P  +   G    A+G+  +A + F+  L+   DN       A   
Sbjct: 1792 AISILQKAAEIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRNAAIAH 1851

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL-------Q 180
             +  +   ++E  + A+ + P  P           ++LG L +A + ++ AL       Q
Sbjct: 1852 QDLKQTKLAIEKLQHAVMLEPYQPT--------WHFELGALLEASEQYEEALAEYNEAMQ 1903

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC------------AMALNY 228
            L+P+            + A  AA + + M K + A E   Y              +   Y
Sbjct: 1904 LNPDGA----------IYAFRAAEVCERMGKKEEAIECLKYALKLEPRNYEWRFKLGCMY 1953

Query: 229  LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
            L   +F      L + L           P  + ++  L  +  +   Y++A    M + K
Sbjct: 1954 LDMEYFAPAAEELAKSLEIE--------PESAEAHLKLGIALINLEQYDQALERLMDAAK 2005

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
               +P+ F   +  L  V  KLG    A+++  + L +     +  +  G +Y  + ++E
Sbjct: 2006 --IEPNNFDV-HEQLSLVMEKLGRPEEAISHIAQALLLDSSRADLYRRAGKLYADMDRLE 2062

Query: 349  KAQELLRKAAKIDPRDAQAFIDLG 372
            +A + L KA ++DP DA+   +LG
Sbjct: 2063 EAAQALEKALELDPDDAETHSELG 2086



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 143/337 (42%), Gaps = 38/337 (11%)

Query: 67   LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
            LA +    A  ++ ++P+     G LL A  + E+A + +   ++ + D        A V
Sbjct: 1859 LAIEKLQHAVMLEPYQPTWHFELGALLEASEQYEEALAEYNEAMQLNPDGAIYAFRAAEV 1918

Query: 127  EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
                G+  +++E  K AL++ P      R  +G     +     A +   ++L+++PE+ 
Sbjct: 1919 CERMGKKEEAIECLKYALKLEPR-NYEWRFKLGCMYLDMEYFAPAAEELAKSLEIEPESA 1977

Query: 187  EALVAL--AVMDL----QANE----AAGIRKG-----------MEKMQRAFEIYPYCAMA 225
            EA + L  A+++L    QA E    AA I              MEK+ R  E   + A A
Sbjct: 1978 EAHLKLGIALINLEQYDQALERLMDAAKIEPNNFDVHEQLSLVMEKLGRPEEAISHIAQA 2037

Query: 226  L---NYLANHFFFTGQHFL-VEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDYEK 278
            L   +  A+ +   G+ +  +++L E A A+       P  + ++  L   Y ++   EK
Sbjct: 2038 LLLDSSRADLYRRAGKLYADMDRLEEAAQALEKALELDPDDAETHSELGLIYEAQ---EK 2094

Query: 279  AGLYYMASVKEIN-KPHEFIFPYYGL--GQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
              L      + I   P     P Y L    +  +L  F  A+   E+ L++ P+N     
Sbjct: 2095 LKLALGEQKEAIRLDPKN---PIYELRAASICRQLRWFEEAMAALERSLDLDPENAAAYN 2151

Query: 336  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
              G +Y  +G ++ A+E    A ++ P +A    +LG
Sbjct: 2152 ERGMLYEAMGNLDAAREQYEIAVRLQPDEALYHRNLG 2188


>gi|118384080|ref|XP_001025193.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89306960|gb|EAS04948.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 658

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 24/340 (7%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           KG +E A   ++  L+ +++N  AL     +   + ++S S+ ++K+ +Q++P  P    
Sbjct: 298 KGMMEDAIETYQKCLQLNQNNEIALYNLGLIYKQQCQFSQSILYFKKCIQINPKDPDYYN 357

Query: 156 LGIGLCRYKL-GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
            G+G   Y+L GQL  + Q     ++L+P +      L +   Q        +  +   +
Sbjct: 358 -GLGN-SYRLNGQLDDSIQTILICVKLNPNDDSYHYNLGLAYYQK---GCFLEASQYFSK 412

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN---HGPTKSHSYYNLARSYH 271
           + EI P  +  L      + +    + +EQL +   A      + P   ++YYNL ++Y+
Sbjct: 413 SLEINPKDSQTL------YHYGLCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLGQAYY 466

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
            +   E++   +   + EIN P+  ++ Y  LG    + G     +  F+K L+I P + 
Sbjct: 467 DQNKIEESIQCFKICL-EIN-PNNSLY-YNSLGLCFCQKGQLDEGIACFKKSLDINPSDE 523

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTA 390
            TL  LG+ Y   G IE + +  +   +I+PR+     +LG           A+ ++K  
Sbjct: 524 NTLNNLGNTYRLKGNIEDSIKCYKVCLEINPRNDICHCNLGIAYFQKGIIEGAIQSYK-- 581

Query: 391 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           ++L      E  +  L   G+  +EKG+F+ A  S++  L
Sbjct: 582 KSLEINPKNEYSLYYL---GLAFYEKGKFDDAILSYRQCL 618



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 144/316 (45%), Gaps = 18/316 (5%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIV- 109
           LG I  +Q +    F  +  Y+ K  +I+  +P  + G G      G+++ +     I  
Sbjct: 325 LGLIYKQQCQ----FSQSILYFKKCIQINPKDPDYYNGLGNSYRLNGQLDDSIQTILICV 380

Query: 110 -LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
            L  + D+    LG A   + +G + ++ +++ ++L+++P          GLC Y+L QL
Sbjct: 381 KLNPNDDSYHYNLGLA--YYQKGCFLEASQYFSKSLEINPK-DSQTLYHYGLCCYELEQL 437

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
            KA  AF ++L+ DP+N      L       N+   I + ++  +   EI P  ++  N 
Sbjct: 438 DKAVSAFVQSLEYDPKNENTYYNLGQAYYDQNK---IEESIQCFKICLEINPNNSLYYNS 494

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
           L   F   GQ   +++         +  P+  ++  NL  +Y  KG+ E +   Y   + 
Sbjct: 495 LGLCFCQKGQ---LDEGIACFKKSLDINPSDENTLNNLGNTYRLKGNIEDSIKCYKVCL- 550

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
           EIN  ++    +  LG    + G    A+ +++K LEI P N  +L  LG  + + G+ +
Sbjct: 551 EINPRNDIC--HCNLGIAYFQKGIIEGAIQSYKKSLEINPKNEYSLYYLGLAFYEKGKFD 608

Query: 349 KAQELLRKAAKIDPRD 364
            A    R+  +++P++
Sbjct: 609 DAILSYRQCLELNPQE 624



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 171/460 (37%), Gaps = 106/460 (23%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD---------NVP 118
           A   YNKA ++  +    +   G L    G +++A  ++  +LE +           N+ 
Sbjct: 134 AISSYNKAIQLKPNYEMCYEALGNLQQDMGLIQEAIFSYNKILEVNPKYENGYNCLANIY 193

Query: 119 ALLGQA---------CVEFN----------------RGRYSDSLEFYKRALQVHPSCPGA 153
             +G+          C+E N                +G   ++L  +KR L+++     A
Sbjct: 194 YKIGKVDEAISIFKQCIEVNPKHENTYINLGLTYKRKGMSEEALILFKRCLEINSRNEVA 253

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA------------------VM 195
               IGL     G++ +A   F ++L L+P   E L +LA                   +
Sbjct: 254 -HYNIGLEYIHQGRVDEAILVFLKSLDLNPSYEECLNSLASAYEEKGMMEDAIETYQKCL 312

Query: 196 DL-QANEAAGIRKGMEKMQ------------RAFEIYPYCAMALNYLANHFFFTGQHFLV 242
            L Q NE A    G+   Q            +  +I P      N L N +   GQ   +
Sbjct: 313 QLNQNNEIALYNLGLIYKQQCQFSQSILYFKKCIQINPKDPDYYNGLGNSYRLNGQ---L 369

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN-KPHEFIF--- 298
           +   +T L      P     +YNL  +Y+ KG + +A  Y+  S+ EIN K  + ++   
Sbjct: 370 DDSIQTILICVKLNPNDDSYHYNLGLAYYQKGCFLEASQYFSKSL-EINPKDSQTLYHYG 428

Query: 299 ----------------------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
                                        YY LGQ          ++  F+  LEI P+N
Sbjct: 429 LCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLGQAYYDQNKIEESIQCFKICLEINPNN 488

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
                +LG  + Q GQ+++     +K+  I+P D     +LG        G   D+ K  
Sbjct: 489 SLYYNSLGLCFCQKGQLDEGIACFKKSLDINPSDENTLNNLGN--TYRLKGNIEDSIKCY 546

Query: 391 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           +  L+            N+G+ +F+KG  E A QS+K +L
Sbjct: 547 KVCLEINPRNDICHC--NLGIAYFQKGIIEGAIQSYKKSL 584



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 117/519 (22%), Positives = 221/519 (42%), Gaps = 58/519 (11%)

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           I + ++  ++  E  P    ALN L   + +  +  + E +      +  H P    SYY
Sbjct: 63  IDEAIQSFKKCLEFNPKHQNALNQLG--YAYHQKKMINESIACYKKNIELH-PNDHLSYY 119

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           NL  + H  G +++A   Y  +++   KP+ +   Y  LG +Q  +G  + A+ ++ K+L
Sbjct: 120 NLGLALHDSGKFQEAISSYNKAIQL--KPN-YEMCYEALGNLQQDMGLIQEAIFSYNKIL 176

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL 384
           E+ P        L +IY ++G++++A  + ++  +++P+    +I+LG  L     G + 
Sbjct: 177 EVNPKYENGYNCLANIYYKIGKVDEAISIFKQCIEVNPKHENTYINLG--LTYKRKGMSE 234

Query: 385 DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD-SKT 443
           +A      L K+      +E+ +   V H+  G  E  HQ   D     ++L  LD + +
Sbjct: 235 EAL----ILFKRC-----LEINSRNEVAHYNIG-LEYIHQGRVDE-AILVFLKSLDLNPS 283

Query: 444 KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 503
               +++ AS  + K M +    E     ++L  N    L+NL  + +Q     + S+LY
Sbjct: 284 YEECLNSLASAYEEKGM-MEDAIETYQKCLQLNQNNEIALYNLGLIYKQ-QCQFSQSILY 341

Query: 504 --RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM---LGDLE 558
             + I    +D  D Y  L    +    L  SI+ +   +K+N   PN  S    LG   
Sbjct: 342 FKKCIQINPKD-PDYYNGLGNSYRLNGQLDDSIQTILICVKLN---PNDDSYHYNLGLAY 397

Query: 559 LKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY---------FAALRNEKRAPKLEA 609
            +   +++A + F + S   + KDS      G   Y          A +++ +  PK E 
Sbjct: 398 YQKGCFLEASQYF-SKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNEN 456

Query: 610 TH------------LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 657
           T+            +E++ + +   +  + +N    N  G+   +KGQ D     F +  
Sbjct: 457 TYYNLGQAYYDQNKIEESIQCFKICLEINPNNSLYYNSLGLCFCQKGQLDEGIACFKK-- 514

Query: 658 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
              S  +     +   NL + Y  +GN   ++K Y+ CL
Sbjct: 515 ---SLDINPSDENTLNNLGNTYRLKGNIEDSIKCYKVCL 550



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 14/276 (5%)

Query: 99  VEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           +++A  +FK  LE +  +  AL  LG A     +   ++S+  YK+ +++HP+       
Sbjct: 63  IDEAIQSFKKCLEFNPKHQNALNQLGYA--YHQKKMINESIACYKKNIELHPN-DHLSYY 119

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +GL  +  G+  +A  ++ +A+QL P N E +   A+ +LQ  +   I++ +    +  
Sbjct: 120 NLGLALHDSGKFQEAISSYNKAIQLKP-NYE-MCYEALGNLQQ-DMGLIQEAIFSYNKIL 176

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           E+ P      N LAN ++  G+   V++            P   ++Y NL  +Y  KG  
Sbjct: 177 EVNPKYENGYNCLANIYYKIGK---VDEAISIFKQCIEVNPKHENTYINLGLTYKRKGMS 233

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
           E+A + +   + EIN  +E    +Y +G   +  G    A+  F K L++ P   E L +
Sbjct: 234 EEALILFKRCL-EINSRNE--VAHYNIGLEYIHQGRVDEAILVFLKSLDLNPSYEECLNS 290

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           L   Y + G +E A E  +K  +++  +  A  +LG
Sbjct: 291 LASAYEEKGMMEDAIETYQKCLQLNQNNEIALYNLG 326



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 48/288 (16%)

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLG 122
           F+ A+QY++K+  I+  +  T    G       ++++A SAF   LE D   +N    LG
Sbjct: 403 FLEASQYFSKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLG 462

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           QA   +++ +  +S++ +K  L+++P+        +GLC  + GQL +    F+++L ++
Sbjct: 463 QA--YYDQNKIEESIQCFKICLEINPN-NSLYYNSLGLCFCQKGQLDEGIACFKKSLDIN 519

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P +                                        LN L N +   G    +
Sbjct: 520 PSD-------------------------------------ENTLNNLGNTYRLKGN---I 539

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           E   +         P     + NL  +Y  KG  E A   Y  S+ EIN  +E+   Y G
Sbjct: 540 EDSIKCYKVCLEINPRNDICHCNLGIAYFQKGIIEGAIQSYKKSL-EINPKNEYSLYYLG 598

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
           L   +   G F  A+ ++ + LE+ P      + +GH Y ++G +++A
Sbjct: 599 LAFYE--KGKFDDAILSYRQCLELNPQENLQNQFIGHEYREIGNLDQA 644


>gi|124024098|ref|YP_001018405.1| hypothetical protein P9303_24071 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964384|gb|ABM79140.1| Hypothetical protein P9303_24071 [Prochlorococcus marinus str. MIT
           9303]
          Length = 622

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 36/312 (11%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +GE++QA + ++ VL  D +N  AL    C++  + R+ D++     A+   P  P A  
Sbjct: 19  QGELDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDDAITLLSSAVSAQPGNPDA-- 76

Query: 156 LGIGLCRYKLGQLGK-------ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
                  Y LG + K       A   +++ L L  E  EAL  L +      E       
Sbjct: 77  ------NYNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGIC---LKETEQYEHS 127

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ--LTETALAVTNH---GPTKSHSY 263
              ++RA    P  A A   L N         L EQ   +E  ++  N     P  + +Y
Sbjct: 128 EIVLKRAISRQPRFAAAWLNLGNT--------LKEQKKYSEAIVSYRNAIEVKPDFAEAY 179

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            NL      +G+ E+A + Y  +++   KP +    Y+ LG V    G+   A+ ++   
Sbjct: 180 LNLGNVLKEEGEVEEAIVSYRKAIE--VKP-DCAGAYFSLGLVLKGEGEVEEAIVSYRNA 236

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 383
           +E+ PD  E    LG++  + G +E+A    RKA ++ P   +AF+ LG +L  ++ G  
Sbjct: 237 IEVKPDFAEAYLNLGYVLKEEGDVEEAIASYRKAIEVKPDFVKAFLGLGAVL--TEKGEI 294

Query: 384 LDAFKTARTLLK 395
            DA +    L +
Sbjct: 295 DDARQVVSALFE 306



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 15/189 (7%)

Query: 32  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 91
           D++ E    LN LG+        ET+Q E  E  I+  +  ++  R      + W+  G 
Sbjct: 102 DLKAEYPEALNNLGICLK-----ETEQYEHSE--IVLKRAISRQPRF----AAAWLNLGN 150

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
            L  + +  +A  +++  +E   D   A L    V    G   +++  Y++A++V P C 
Sbjct: 151 TLKEQKKYSEAIVSYRNAIEVKPDFAEAYLNLGNVLKEEGEVEEAIVSYRKAIEVKPDCA 210

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
           GA    +GL     G++ +A  +++ A+++ P+  EA + L  +     E   + + +  
Sbjct: 211 GAY-FSLGLVLKGEGEVEEAIVSYRNAIEVKPDFAEAYLNLGYV---LKEEGDVEEAIAS 266

Query: 212 MQRAFEIYP 220
            ++A E+ P
Sbjct: 267 YRKAIEVKP 275



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG +  ++ E EE    A   Y KA  +       +   G +L  +GEVE+A  +++
Sbjct: 179 YLNLGNVLKEEGEVEE----AIVSYRKAIEVKPDCAGAYFSLGLVLKGEGEVEEAIVSYR 234

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             +E   D   A L    V    G   +++  Y++A++V P    A  LG+G    + G+
Sbjct: 235 NAIEVKPDFAEAYLNLGYVLKEEGDVEEAIASYRKAIEVKPDFVKAF-LGLGAVLTEKGE 293

Query: 168 LGKARQAFQRALQL 181
           +  ARQ      ++
Sbjct: 294 IDDARQVVSALFEM 307



 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 111/286 (38%), Gaps = 51/286 (17%)

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y LG V      +  A++ +EK L++  +  E L  LG    +  Q E ++ +L++A   
Sbjct: 78  YNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGICLKETEQYEHSEIVLKRAISR 137

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGE 418
            PR A A+++LG  L           +  A    + A E  P   E   N+G +  E+GE
Sbjct: 138 QPRFAAAWLNLGNTLKEQKK------YSEAIVSYRNAIEVKPDFAEAYLNLGNVLKEEGE 191

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            E A  S++ A                                           +E+  +
Sbjct: 192 VEEAIVSYRKA-------------------------------------------IEVKPD 208

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
                F+L  +L+   +   A V YR  +    D+ +AYL L  + K   +++ +I    
Sbjct: 209 CAGAYFSLGLVLKGEGEVEEAIVSYRNAIEVKPDFAEAYLNLGYVLKEEGDVEEAIASYR 268

Query: 539 EALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 584
           +A++V   +  A   LG +  +  +   A++   A  +    ++SY
Sbjct: 269 KAIEVKPDFVKAFLGLGAVLTEKGEIDDARQVVSALFEMIAIEESY 314


>gi|449108889|ref|ZP_21745530.1| hypothetical protein HMPREF9722_01226 [Treponema denticola ATCC
           33520]
 gi|448961164|gb|EMB41872.1| hypothetical protein HMPREF9722_01226 [Treponema denticola ATCC
           33520]
          Length = 415

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 213 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 268
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|298675989|ref|YP_003727739.1| hypothetical protein Metev_2116 [Methanohalobium evestigatum
           Z-7303]
 gi|298288977|gb|ADI74943.1| TPR repeat-containing protein [Methanohalobium evestigatum Z-7303]
          Length = 461

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 44/309 (14%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           H+ LA + + KAS ++  +   W+ KG L     + E+A  ++   LE + DN  A + +
Sbjct: 147 HYDLALETFKKASDLNPEDDFIWIEKGILYDGLEKYEKALESYDKALEINPDNETAWINK 206

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
                   RY D+L+ + +A+ ++P          G+ + KL     A Q++ RA++L+P
Sbjct: 207 GHTLNKLERYEDALKAFNKAITINPDNEETWDYK-GIVQEKLNLYEDALQSYNRAIKLNP 265

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           E+         + L+  E +   K ++    + E+ P   +A       +F+ G   ++E
Sbjct: 266 ESGYFWAKKGYI-LKIQEHS--EKALDSYNNSLELNPEYDLA-------WFYKGT--ILE 313

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           +                             G Y++A   Y  S+ E+N P++ I  +Y  
Sbjct: 314 EF----------------------------GKYDEALKAYNKSL-ELN-PNKSIV-WYNK 342

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G +  K+  +  AL  + K LE+ P++  TL + G IY  +GQ  KA +   KA  I+P+
Sbjct: 343 GFLLTKMQMYNEALEAYNKSLELNPEDEVTLTSKGLIYTYMGQYNKALKAYDKALNINPK 402

Query: 364 DAQAFIDLG 372
            A A+ ++ 
Sbjct: 403 YANAWYNMS 411



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 27/272 (9%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
            R+ D+L  + RAL+++P    A +   G     L +  +A +AF + + + P++    +
Sbjct: 44  NRHKDALNIFNRALKLNPRDVTAWK-NKGFELNTLEKHEEALEAFSKVVDIKPDDNIGWI 102

Query: 191 A--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
              +A+  L+  E A      E    A +I P  ++A         +  +   ++ L   
Sbjct: 103 GKGIALTALERYEEA-----TEAFDEAAKISPEDSVA---------WKSKGLSLKNLNHY 148

Query: 249 ALAV------TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
            LA+      ++  P     +      Y     YEKA   Y  ++ EIN  +E    +  
Sbjct: 149 DLALETFKKASDLNPEDDFIWIEKGILYDGLEKYEKALESYDKAL-EINPDNET--AWIN 205

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G    KL  +  AL  F K + I PDN ET    G +  +L   E A +   +A K++P
Sbjct: 206 KGHTLNKLERYEDALKAFNKAITINPDNEETWDYKGIVQEKLNLYEDALQSYNRAIKLNP 265

Query: 363 RDAQAFIDLGELL-ISSDTGAALDAFKTARTL 393
                +   G +L I   +  ALD++  +  L
Sbjct: 266 ESGYFWAKKGYILKIQEHSEKALDSYNNSLEL 297


>gi|449127888|ref|ZP_21764158.1| hypothetical protein HMPREF9733_01561 [Treponema denticola SP33]
 gi|448943220|gb|EMB24112.1| hypothetical protein HMPREF9733_01561 [Treponema denticola SP33]
          Length = 415

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIQFYKQCLEHHPSNNY 129

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 213 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 268
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GIYYFERALE-RAPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKENYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
           T  T LK   E+    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDT-EDTNYRVYLELAQCYIEKKEKQKAIETLMDFQKLGI 398


>gi|345869875|ref|ZP_08821831.1| Tetratricopeptide TPR_1 repeat-containing protein [Thiorhodococcus
           drewsii AZ1]
 gi|343922737|gb|EGV33436.1| Tetratricopeptide TPR_1 repeat-containing protein [Thiorhodococcus
           drewsii AZ1]
          Length = 1054

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 159/360 (44%), Gaps = 19/360 (5%)

Query: 70  QYYNKASRIDMHEPSTWVGKGQLLLAK-GEVEQASSAFKIVLEADRDNVPALLGQACVEF 128
           Q Y +A  I       W G G LL       ++A  AF+  +E + +      G   +  
Sbjct: 608 QAYRRAIEIAPDYAYPWYGLGNLLTQHLARYDEAEQAFRRAIEIEPNFAYPWYGLGNLLT 667

Query: 129 NR-GRYSDSLEFYKRALQVHPSCPGAIRLGIG-LCRYKLGQLGKARQAFQRALQLDPENV 186
           N   RY ++ + Y+RA+++ P+       G+G L +  L +  +A QA++RA+++DP N 
Sbjct: 668 NHLARYDEAEQAYRRAIEIDPNFADPW-YGLGNLLKNHLARYDEAEQAYRRAIEIDPNNA 726

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF-FFTGQHFLVEQL 245
                L  + +Q    A   +  +  +RA EI P  A   N L N       ++   EQ 
Sbjct: 727 PPWNGLGNLLIQ--HLARYDEAEQAYRRAIEIDPNNAAPWNGLGNLLKNHLARYDEAEQA 784

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSK-GDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
              A+ +    P  +  +Y L          Y++A   Y  S+ EI+   +F  P+ GLG
Sbjct: 785 YRRAIEID---PNNAPPWYGLGNLLQDHFAHYDEAEQAYRCSI-EIDP--DFAHPWNGLG 838

Query: 305 Q-VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-QLGQIEKAQELLRKAAKIDP 362
             +Q  L  +  A   F + +EI PD       LG++    L + ++A++  R+A +IDP
Sbjct: 839 NLLQDHLARYDEAEQAFRRAIEIDPDFAHPWNGLGNLLKNHLARYDEAEQAYRRAIEIDP 898

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
            D  AF +     +       L+A + A   ++ A E+  +  ++ +  I    G++ +A
Sbjct: 899 -DEPAFSNALAWFLYQQDRDLLEARRRAERAIELAPED--LYSIHTLATILVSLGDWPAA 955



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 18/213 (8%)

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-----YPYCAM 224
           ++ QA++RA+++ P+       L   +L     A   +  +  +RA EI     YP+  +
Sbjct: 605 ESEQAYRRAIEIAPDYAYPWYGLG--NLLTQHLARYDEAEQAFRRAIEIEPNFAYPWYGL 662

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
             N L NH     ++   EQ    A+ +  +     +   NL +++ ++ D  +      
Sbjct: 663 G-NLLTNHL---ARYDEAEQAYRRAIEIDPNFADPWYGLGNLLKNHLARYDEAEQAYRRA 718

Query: 285 ASVKEINKPHEFIFPYYGLGQVQLK-LGDFRSALTNFEKVLEIYPDNCETLKALGHIYV- 342
             +   N P     P+ GLG + ++ L  +  A   + + +EI P+N      LG++   
Sbjct: 719 IEIDPNNAP-----PWNGLGNLLIQHLARYDEAEQAYRRAIEIDPNNAAPWNGLGNLLKN 773

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            L + ++A++  R+A +IDP +A  +  LG LL
Sbjct: 774 HLARYDEAEQAYRRAIEIDPNNAPPWYGLGNLL 806



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLL---LAKGEVEQASSAFKIVLEADRDNVPAL 120
           H+  A Q Y  +  ID      W G G LL   LA+   ++A  AF+  +E D D     
Sbjct: 812 HYDEAEQAYRCSIEIDPDFAHPWNGLGNLLQDHLAR--YDEAEQAFRRAIEIDPDFAHPW 869

Query: 121 LGQACVEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ-LGKARQAFQRA 178
            G   +  N   RY ++ + Y+RA+++ P  P A    +    Y+  + L +AR+  +RA
Sbjct: 870 NGLGNLLKNHLARYDEAEQAYRRAIEIDPDEP-AFSNALAWFLYQQDRDLLEARRRAERA 928

Query: 179 LQLDPENVEALVALAVM 195
           ++L PE++ ++  LA +
Sbjct: 929 IELAPEDLYSIHTLATI 945


>gi|422341626|ref|ZP_16422567.1| TPR domain-containing protein [Treponema denticola F0402]
 gi|325474465|gb|EGC77652.1| TPR domain-containing protein [Treponema denticola F0402]
          Length = 415

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 150/340 (44%), Gaps = 21/340 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 213 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 268
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 428
           T  T LK  G +    V   +   + EK E + A ++  D
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLID 392



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 2/133 (1%)

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           +  +GL      +  F  A+  +E+ L+    N   L  +   Y +  + EKA++L +K 
Sbjct: 129 YALFGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKEFEKAEKLYQKV 188

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
            +  P++A A I LG L  + D     +A      +++ +GE V I +L +IG  + +  
Sbjct: 189 LEKSPKNAYALIGLGHL--NYDFKKYREALVYWEKVMESSGELVDIRILTSIGNCYRKMK 246

Query: 418 EFESAHQSFKDAL 430
            F+     F+ AL
Sbjct: 247 LFDRGVYYFERAL 259


>gi|388841092|gb|AFK79142.1| hypothetical protein PCC8801_1300 [uncultured bacterium F39-01]
          Length = 645

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 184/443 (41%), Gaps = 88/443 (19%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALL 121
            F  A   Y  A ++   +   +   G       +  +A+ AF   I L+AD  +    L
Sbjct: 130 QFAQAITAYENALKVTPQDAVIYNNLGAAYFGLNKNNEAAQAFSKSIALKADDADAYFNL 189

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G A    ++  + D+L+ +K A+++ P   G     IG     +     A +A+Q+A++L
Sbjct: 190 GIAYSSMDK--FDDALKAFKDAVRIKPGW-GEAHNAIGDTYLGMSNFQDAARAYQQAVRL 246

Query: 182 DPEN--------------------VEALV---------ALAVMDLQAN--EAAGIRKGME 210
           +P N                    +EAL          A+A  +L A+  +A   ++ +E
Sbjct: 247 EPTNSTAYSNLGYALDRLGRSNDSIEALRNAVRLKGDDAVAYNNLGASLYKAGRYQEAIE 306

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
               A  + P    ALN L   ++ T Q+    Q  + A+ V    P    + YNL  +Y
Sbjct: 307 AFGNAVRLNPNDVEALNNLGAAYYVTAQYDRALQNFQQAVRVKADSP---DAQYNLGNAY 363

Query: 271 HSKGDYEKAGLYYMASVK------------------------EINKPHEFI-------FP 299
           +  G Y +A   Y  +++                         I + +E I         
Sbjct: 364 YMTGKYREATAAYRQAIQLKADYVEARTNLGSLLIALGENQEAITELNESIRLRRDNPVA 423

Query: 300 YYGLGQVQLKLGD----------FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
           +  LG   +KLG+          FR A+ ++++ L + PD  + L  LG +Y +LGQ ++
Sbjct: 424 HNNLGYANVKLGESLAPAAATEYFRRAVDSYQEALRLRPDYIKALNNLGAVYNKLGQYQE 483

Query: 350 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLN 407
           A ++LR+A + +   A+A  +LG  L +         F  A T L++A    P   E  N
Sbjct: 484 AVDVLRRAVQGNADFAEAQYNLGTALYNRGQ------FNEAVTSLQQAVRLKPDYAEAYN 537

Query: 408 NIGVIHFEKGEFESAHQSFKDAL 430
           ++G   ++  +F+ A +++K AL
Sbjct: 538 SLGSALYKAQQFDPAIEAYKKAL 560



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 109/510 (21%), Positives = 195/510 (38%), Gaps = 68/510 (13%)

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
            N ++  GQ        E AL VT   P  +  Y NL  +Y       +A     A  K 
Sbjct: 122 GNTYYDLGQFAQAITAYENALKVT---PQDAVIYNNLGAAYFGLNKNNEAA---QAFSKS 175

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
           I    +    Y+ LG     +  F  AL  F+  + I P   E   A+G  Y+ +   + 
Sbjct: 176 IALKADDADAYFNLGIAYSSMDKFDDALKAFKDAVRIKPGWGEAHNAIGDTYLGMSNFQD 235

Query: 350 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
           A    ++A +++P ++ A+ +LG  L     G + D+ +  R  ++  G++      NN+
Sbjct: 236 AARAYQQAVRLEPTNSTAYSNLGYAL--DRLGRSNDSIEALRNAVRLKGDDA--VAYNNL 291

Query: 410 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF-KDMQLFHRFEN 468
           G   ++ G ++ A ++F    G+ + L   D +    +  A     Q+ + +Q F +   
Sbjct: 292 GASLYKAGRYQEAIEAF----GNAVRLNPNDVEALNNLGAAYYVTAQYDRALQNFQQ--- 344

Query: 469 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
               V +  +     +NL            A+  YR  +    DYV+A   L ++  A  
Sbjct: 345 ---AVRVKADSPDAQYNLGNAYYMTGKYREATAAYRQAIQLKADYVEARTNLGSLLIALG 401

Query: 529 NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLS 588
             Q +I  +NE++++    P A + LG                            YA + 
Sbjct: 402 ENQEAITELNESIRLRRDNPVAHNNLG----------------------------YANVK 433

Query: 589 LGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV 648
           LG          E  AP     +  +A + Y   +      + A N  G V  + GQ+  
Sbjct: 434 LG----------ESLAPAAATEYFRRAVDSYQEALRLRPDYIKALNNLGAVYNKLGQYQE 483

Query: 649 SKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR-KFYYNTDAQI 707
           + D+   ++ A  G+      +   NL    + +G F  A+   Q  +R K  Y   A+ 
Sbjct: 484 AVDV---LRRAVQGN--ADFAEAQYNLGTALYNRGQFNEAVTSLQQAVRLKPDY---AEA 535

Query: 708 LLYLARTHYEAEQWQDCKKSLLRAIHLAPS 737
              L    Y+A+Q+    ++  +A+ L P 
Sbjct: 536 YNSLGSALYKAQQFDPAIEAYKKALSLKPG 565



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 145/363 (39%), Gaps = 52/363 (14%)

Query: 75  ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 134
           A R+   +   +   G  L   G  ++A  AF   +  + ++V AL       +   +Y 
Sbjct: 277 AVRLKGDDAVAYNNLGASLYKAGRYQEAIEAFGNAVRLNPNDVEALNNLGAAYYVTAQYD 336

Query: 135 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
            +L+ +++A++V    P A +  +G   Y  G+  +A  A+++A+QL  + VEA   L  
Sbjct: 337 RALQNFQQAVRVKADSPDA-QYNLGNAYYMTGKYREATAAYRQAIQLKADYVEARTNLGS 395

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET-ALAVT 253
           + +   E    ++ + ++  +  +     +A N L       G+       TE    AV 
Sbjct: 396 LLIALGEN---QEAITELNESIRLRRDNPVAHNNLGYANVKLGESLAPAAATEYFRRAVD 452

Query: 254 NHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
           ++       P    +  NL   Y+  G Y++A        + +    +F    Y LG   
Sbjct: 453 SYQEALRLRPDYIKALNNLGAVYNKLGQYQEA---VDVLRRAVQGNADFAEAQYNLGTAL 509

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
              G F  A+T+ ++ + + PD  E   +LG               L KA + DP     
Sbjct: 510 YNRGQFNEAVTSLQQAVRLKPDYAEAYNSLGSA-------------LYKAQQFDP----- 551

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
                          A++A+K A +L  K G     E  NN+G ++F    +  A  SFK
Sbjct: 552 ---------------AIEAYKKALSL--KPGTA---ETNNNLGTVYFRTKRYPEAAGSFK 591

Query: 428 DAL 430
           +A+
Sbjct: 592 EAV 594



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 131/310 (42%), Gaps = 39/310 (12%)

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAF 387
           D  E  K  G+ Y  LGQ  +A      A K+ P+DA  + +LG      +    A  AF
Sbjct: 113 DRAEAFKNQGNTYYDLGQFAQAITAYENALKVTPQDAVIYNNLGAAYFGLNKNNEAAQAF 172

Query: 388 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA--LGDGIWLTLLDSKTKT 445
             ++++  KA +    +   N+G+ +    +F+ A ++FKDA  +  G W    ++   T
Sbjct: 173 --SKSIALKADDA---DAYFNLGIAYSSMDKFDDALKAFKDAVRIKPG-WGEAHNAIGDT 226

Query: 446 YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI---HDTVAASVL 502
           Y+      M  F+D    ++       V L     T   NL   L+++   +D++ A  L
Sbjct: 227 YL-----GMSNFQDAARAYQ-----QAVRLEPTNSTAYSNLGYALDRLGRSNDSIEA--L 274

Query: 503 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND 562
              +  K  D V AY  L A        Q +IE    A+++N     AL+ LG       
Sbjct: 275 RNAVRLKGDDAV-AYNNLGASLYKAGRYQEAIEAFGNAVRLNPNDVEALNNLGAAYYVTA 333

Query: 563 DWVKAKETF----RAASDATDGKDSYATLSLGNWNYFAALRNE-----KRAPKLEATHLE 613
            + +A + F    R  +D+ D     A  +LGN  Y      E     ++A +L+A ++E
Sbjct: 334 QYDRALQNFQQAVRVKADSPD-----AQYNLGNAYYMTGKYREATAAYRQAIQLKADYVE 388

Query: 614 KAKELYTRVI 623
               L + +I
Sbjct: 389 ARTNLGSLLI 398


>gi|118362625|ref|XP_001014539.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89296306|gb|EAR94294.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 606

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 158/337 (46%), Gaps = 25/337 (7%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
           +++Q   AF  +L+ +  +         V    G++ ++   +  AL+++P    A   G
Sbjct: 25  KLKQKEQAFVKILQTNPQSYQTYEELGNVYLEMGQFENAKNSFYSALEINPQSARA-YCG 83

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +G+   +   + ++ Q FQ++L+L+P++   L  L ++    ++   I + +   ++A E
Sbjct: 84  LGIICSEQNMIKESEQYFQKSLELNPKSAITLSNLGIL---YDKCVTIDQRIFCYKQAIE 140

Query: 218 IYP-----YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
             P     Y  + L YL    +   +     QL +  L V    P   ++++NLA  Y S
Sbjct: 141 SDPSIHQSYNGLGLAYLDKQMYGNAK-----QLFQKCLEVN---PQNINAHFNLATIYRS 192

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
           + +Y+   +  + +  +I   ++  F  YY LG+   +LG    A+   +K +EI P   
Sbjct: 193 ENNYQDC-INCLETCLKIYPQNDAPFSIYYNLGEAYQQLGMMEEAIKYLKKTIEIQPQQY 251

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 391
                +G IY Q+  +E++ +    A KI+P  A+   +LG  LI+ + G   +A +  +
Sbjct: 252 LLHDKIGDIYFQMDNLEESLKHFETALKINPESARTLANLG--LININLGNYQEAQQQLQ 309

Query: 392 TLLKK-AGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
             L+   G ++    L   G +H ++G F+ A Q+++
Sbjct: 310 YALQLDPGAQICYHYL---GYLHLQQGRFDEAQQNYE 343



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 155/368 (42%), Gaps = 20/368 (5%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y +A   D     ++ G G   L K     A   F+  LE +  N+ A    A +  +  
Sbjct: 135 YKQAIESDPSIHQSYNGLGLAYLDKQMYGNAKQLFQKCLEVNPQNINAHFNLATIYRSEN 194

Query: 132 RYSDSLEFYKRALQVHPS--CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
            Y D +   +  L+++P    P +I   +G    +LG + +A +  ++ +++ P+  + L
Sbjct: 195 NYQDCINCLETCLKIYPQNDAPFSIYYNLGEAYQQLGMMEEAIKYLKKTIEIQPQ--QYL 252

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
           +   + D+   +   + + ++  + A +I P  A  L  L       G +   ++  +  
Sbjct: 253 LHDKIGDIYF-QMDNLEESLKHFETALKINPESARTLANLGLININLGNY---QEAQQQL 308

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV--- 306
                  P     Y+ L   +  +G +++A   Y  S  EIN   + +     LG     
Sbjct: 309 QYALQLDPGAQICYHYLGYLHLQQGRFDEAQQNY-ESYFEINPEDDNLNALEHLGITYMN 367

Query: 307 QLKLGDFRSALTN----FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           Q+     R  L      +EK+L+I P++   L  LG IY  LGQ+E+A +  + A +IDP
Sbjct: 368 QIIFKGKRDLLDKTRDLYEKLLKIEPNSVTILLNLGSIYYNLGQLEQAIKYNQMALQIDP 427

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
              QA  + G  +I    G A  A K  +   +   +    + + N+G+I+ + G  + A
Sbjct: 428 NYDQANFNQG--IIYHQKGMAEKAIKYFQKSFQSNSKSS--DAIYNLGIIYGQNGNLQEA 483

Query: 423 HQSFKDAL 430
               K AL
Sbjct: 484 EYFNKLAL 491


>gi|345302037|ref|YP_004823939.1| hypothetical protein Rhom172_0153 [Rhodothermus marinus
           SG0.5JP17-172]
 gi|345111270|gb|AEN72102.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus SG0.5JP17-172]
          Length = 465

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 142/341 (41%), Gaps = 39/341 (11%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W+ +G LL   G  E+A  A++  L  +  +   L+       N GR+ ++L+ Y+RAL
Sbjct: 74  AWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQTYERAL 133

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           Q+ P     I   +G+   ++ +L +A QA + A +L+P++ E    L       +    
Sbjct: 134 QIDP-LNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFC---YDRLGD 189

Query: 205 IRKGMEKMQRAFEIYPYCA-------MALNYLANH--------FFFTGQHFLVEQLTETA 249
             + +    R  E+ PY A       + LN +           +    Q           
Sbjct: 190 DERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNRG 249

Query: 250 LAVTNHGPTKS----------------HSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
            A+TN G  +                  +YYN+A +Y    +YE A  Y+  +++E    
Sbjct: 250 NALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAY 309

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
            E    +YGLG     L  F  A+   E+ + + P+  E   A         +++ A + 
Sbjct: 310 AE---AWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQS 366

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 393
            R+  ++DP++  A++D  E L+ +     +L A++ A TL
Sbjct: 367 YRRVIELDPQNRDAWLDYAETLLEAGYVEESLQAYRQALTL 407



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 153/366 (41%), Gaps = 61/366 (16%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
           + RGR+ D+L    R L +HP+   A +R GI L    LG+  +A QA++RAL L+P + 
Sbjct: 49  YERGRFEDALGAIDRLLALHPTASDAWMRRGILLS--HLGRHEEALQAYERALSLNPTDT 106

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQ 244
           E LV L +     +      + ++  +RA +I P        L +  ++     L  +++
Sbjct: 107 ETLVNLGIT---LDNLGRFEEALQTYERALQIDP--------LNDEIYYNLGITLERMDR 155

Query: 245 LTETALAVTNHG---PTKSHSYYNLARSYHSKGDYEKAGLYY------------------ 283
           L E   A+       P     +Y L   Y   GD E++   Y                  
Sbjct: 156 LEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRG 215

Query: 284 -----MASVKEINKPHEFIFP--------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
                M   +E  + +++           +Y  G     LGD R A+ ++EKVLEI   +
Sbjct: 216 IVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGD 275

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
             T   +   Y +L + E A +  + A + DP  A+A+  LG      D   AL+ F+ A
Sbjct: 276 PATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLG---CCYD---ALERFEEA 329

Query: 391 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 450
              +++A     + +        + K + E   +  +DAL     +  LD + +   +D 
Sbjct: 330 IACMERA-----VTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWLDY 384

Query: 451 SASMLQ 456
           + ++L+
Sbjct: 385 AETLLE 390



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 22/196 (11%)

Query: 25  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 84
           E+D Y AD  Y R  +LN +G                   F  A + Y+ A  I     S
Sbjct: 202 ELDPYSADAWYNRGIVLNRMG------------------RFREAVESYDYALAIQEDFGS 243

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W  +G  L   G++  A  +++ VLE +  +       A        Y  ++++++ AL
Sbjct: 244 AWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLAL 303

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           +  P+   A   G+G C   L +  +A    +RA+ L PE  E   A A  D + N A  
Sbjct: 304 EEDPAYAEAW-YGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKA--DCEYN-ARR 359

Query: 205 IRKGMEKMQRAFEIYP 220
           ++  ++  +R  E+ P
Sbjct: 360 LQDALQSYRRVIELDP 375


>gi|118362609|ref|XP_001014531.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89296298|gb|EAR94286.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1163

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 137/308 (44%), Gaps = 16/308 (5%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 125
            A + Y     I+      ++  G L   + E+++A  ++   L  +   D+    LG+A 
Sbjct: 794  AIECYLNCIEINPQNDICYMNLGNLYQNQNELDKAIESYYKCLNVNPQLDSCYYYLGEA- 852

Query: 126  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
             ++ +  + +S++ Y + L+++P+   A  L +G      G + +A   ++++L L+ + 
Sbjct: 853  -QYKKSLFDESIKSYLKCLEINPN-NEACYLSLGQTYQNQGMINEAILIYEKSLNLNIKI 910

Query: 186  VEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
                + L V      E  G I + ++K Q++ EI P   +    L N +   G      Q
Sbjct: 911  DVCCLNLGV----CYEIKGRIDEAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDEAIQ 966

Query: 245  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
              +  L +    P K   Y NL   Y  KG+ +KA   Y   +  I  P + I  Y  LG
Sbjct: 967  AYQKCLQLN---PKKEACYLNLGNVYQIKGELDKAIKCYQKCI--ILNPKKDI-CYLNLG 1020

Query: 305  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
                  G+   ++ N++K L + P N   L+ LG+ +   G IE+A +  R   +++P  
Sbjct: 1021 NAYQNKGNLEESIKNYQKCLNLNPKNDTCLENLGNAFKNKGMIEEAIKQYRFCLQLNPNK 1080

Query: 365  AQAFIDLG 372
               +++LG
Sbjct: 1081 YSCYLNLG 1088



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 101/458 (22%), Positives = 179/458 (39%), Gaps = 60/458 (13%)

Query: 153  AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
              ++ +G+C  K G+L +A + FQ  L L+P+N   +  L + D+   +A  I + +   
Sbjct: 708  TCQMNLGICLEKTGKLDEAIKQFQNCLDLNPKN--EICYLKIGDVYRKKAM-INEAISAY 764

Query: 213  QRAFEIYP---YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
            ++  EI P    C ++L     +         + +  E  L      P     Y NL   
Sbjct: 765  KKCLEINPKNDICCLSLGICLEN------SNKINEAIECYLNCIEINPQNDICYMNLGNL 818

Query: 270  YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
            Y ++ + +KA   Y    K +N   +    YY LG+ Q K   F  ++ ++ K LEI P+
Sbjct: 819  YQNQNELDKAIESYY---KCLNVNPQLDSCYYYLGEAQYKKSLFDESIKSYLKCLEINPN 875

Query: 330  NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
            N     +LG  Y   G I +A  +  K+  ++ +     ++LG   +  +    +D    
Sbjct: 876  NEACYLSLGQTYQNQGMINEAILIYEKSLNLNIKIDVCCLNLG---VCYEIKGRID---- 928

Query: 390  ARTLLKKAGEEVPIEVLN-----NIGVIHFEKGEFESAHQSFKDAL-----GDGIWLTL- 438
                +KK  + + I   N     N+G  +  KG F+ A Q+++  L      +  +L L 
Sbjct: 929  --EAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDEAIQAYQKCLQLNPKKEACYLNLG 986

Query: 439  --------LDSKTKTY----VIDASASMLQFKDMQLFHRFENDGN----------HVELP 476
                    LD   K Y    +++    +     + L + ++N GN           + L 
Sbjct: 987  NVYQIKGELDKAIKCYQKCIILNPKKDICY---LNLGNAYQNKGNLEESIKNYQKCLNLN 1043

Query: 477  WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
                T L NL    +       A   YR  L    +    YL L    + +  L  +IE 
Sbjct: 1044 PKNDTCLENLGNAFKNKGMIEEAIKQYRFCLQLNPNKYSCYLNLGNTYQKKGMLDEAIEC 1103

Query: 537  VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
             N+ + +N     + + LG   L  D    A + F+  
Sbjct: 1104 YNKCININPNNETSYANLGLCYLSKDMKYDAIKQFQKC 1141



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/329 (21%), Positives = 145/329 (44%), Gaps = 18/329 (5%)

Query: 48   YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
            Y YLG+ + K+   +E    + + Y K   I+ +  + ++  GQ    +G + +A   ++
Sbjct: 846  YYYLGEAQYKKSLFDE----SIKSYLKCLEINPNNEACYLSLGQTYQNQGMINEAILIYE 901

Query: 108  IVLEAD-RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
              L  + + +V  L    C E  +GR  ++++ Y+++++++P+      L +G      G
Sbjct: 902  KSLNLNIKIDVCCLNLGVCYEI-KGRIDEAIKKYQQSIEINPA-NDVCFLNLGNAYLNKG 959

Query: 167  QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMA 225
               +A QA+Q+ LQL+P+     + L        +  G + K ++  Q+   + P   + 
Sbjct: 960  MFDEAIQAYQKCLQLNPKKEACYLNLG----NVYQIKGELDKAIKCYQKCIILNPKKDIC 1015

Query: 226  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
               L N +   G    +E+  +      N  P       NL  ++ +KG  E+A   Y  
Sbjct: 1016 YLNLGNAYQNKGN---LEESIKNYQKCLNLNPKNDTCLENLGNAFKNKGMIEEAIKQYRF 1072

Query: 286  SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
             + ++N P+++   Y  LG    K G    A+  + K + I P+N  +   LG  Y+   
Sbjct: 1073 CL-QLN-PNKY-SCYLNLGNTYQKKGMLDEAIECYNKCININPNNETSYANLGLCYLSKD 1129

Query: 346  QIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
                A +  +K  +I+P +    I L ++
Sbjct: 1130 MKYDAIKQFQKCLQINPNNKTCLISLQKM 1158



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 105/502 (20%), Positives = 190/502 (37%), Gaps = 67/502 (13%)

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           +NL  SY  KG   KA   Y   +  +N  ++    +Y LG    K G    AL +F+  
Sbjct: 439 FNLGISYKKKGMLNKAIKQYKKCL-SLNPKYDAC--HYNLGIAYKKKGMVDEALKSFQDC 495

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGA 382
           +++ P        +G+IY+    +E+A    +K   +DP     F +LG +         
Sbjct: 496 IDLNPKYGACYYNIGNIYLMKDLLEEAIAQYQKCLTLDPNYEACFFNLGVIYKKKCMIEE 555

Query: 383 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-----DGIWLT 437
           A++ F+   +L +K           N+G+I  EKG  + A + F   L      D  + +
Sbjct: 556 AVNLFEKCLSLNQKY-----YACYYNLGLIQNEKGIIDEAIKLFLKCLDINPNFDACYYS 610

Query: 438 L-LDSKTKTYVIDASASMLQFKDM-----QLFHRFENDGNHVELPWNKVTVLFNLARLLE 491
           L +  K K  + DA   + QF++      +L + F   GN          V ++   L E
Sbjct: 611 LGVAYKNKGMLNDA---IKQFQNCINLNSKLDYCFFELGN----------VQYDQGMLDE 657

Query: 492 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 551
            +   +    L        Q + +  L+L  I + +  L  +I+   + L ++ +     
Sbjct: 658 SVQSYLKCIDL-------NQSFQNCSLKLGNIYQQKGMLDEAIKQFQKYLSIDSENDTCQ 710

Query: 552 SMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 611
             LG    K     +A + F+   D  + K+    L +G+     A+ NE          
Sbjct: 711 MNLGICLEKTGKLDEAIKQFQNCLD-LNPKNEICYLKIGDVYRKKAMINE---------- 759

Query: 612 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 671
              A   Y + +  +  N       G+ L    + + + + +    E        Q    
Sbjct: 760 ---AISAYKKCLEINPKNDICCLSLGICLENSNKINEAIECYLNCIEINP-----QNDIC 811

Query: 672 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQI---LLYLARTHYEAEQWQDCKKSL 728
           ++NL ++Y  Q     A++ Y  CL     N + Q+     YL    Y+   + +  KS 
Sbjct: 812 YMNLGNLYQNQNELDKAIESYYKCL-----NVNPQLDSCYYYLGEAQYKKSLFDESIKSY 866

Query: 729 LRAIHLAPSNYTLRFDAGVAMQ 750
           L+ + + P+N       G   Q
Sbjct: 867 LKCLEINPNNEACYLSLGQTYQ 888



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 6/167 (3%)

Query: 35   YERIAILNAL-GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 93
            Y++  ILN    + Y  LG     +   EE    + + Y K   ++    +     G   
Sbjct: 1002 YQKCIILNPKKDICYLNLGNAYQNKGNLEE----SIKNYQKCLNLNPKNDTCLENLGNAF 1057

Query: 94   LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
              KG +E+A   ++  L+ + +     L        +G   +++E Y + + ++P+   +
Sbjct: 1058 KNKGMIEEAIKQYRFCLQLNPNKYSCYLNLGNTYQKKGMLDEAIECYNKCININPNNETS 1117

Query: 154  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 200
                +GLC         A + FQ+ LQ++P N   L++L  M  + N
Sbjct: 1118 YA-NLGLCYLSKDMKYDAIKQFQKCLQINPNNKTCLISLQKMQNKKN 1163



 Score = 39.7 bits (91), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 63/337 (18%), Positives = 129/337 (38%), Gaps = 28/337 (8%)

Query: 45  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 104
           G  Y  +G I   +   EE    A   Y K   +D +  + +   G +   K  +E+A +
Sbjct: 503 GACYYNIGNIYLMKDLLEE----AIAQYQKCLTLDPNYEACFFNLGVIYKKKCMIEEAVN 558

Query: 105 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
            F+  L  ++           ++  +G   ++++ + + L ++P+   A    +G+    
Sbjct: 559 LFEKCLSLNQKYYACYYNLGLIQNEKGIIDEAIKLFLKCLDINPN-FDACYYSLGVAYKN 617

Query: 165 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
            G L  A + FQ  + L+ +          +D    E   ++     +  + + Y  C  
Sbjct: 618 KGMLNDAIKQFQNCINLNSK----------LDYCFFELGNVQYDQGMLDESVQSYLKCID 667

Query: 225 ALNYLANHFFFTGQHFLVEQLTETA-------LAVTNHGPTKSHSYYNLARSYHSKGDYE 277
                 N     G  +  + + + A       L++ +   T      NL       G  +
Sbjct: 668 LNQSFQNCSLKLGNIYQQKGMLDEAIKQFQKYLSIDSENDTCQM---NLGICLEKTGKLD 724

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A +    +  ++N  +E    Y  +G V  K      A++ ++K LEI P N     +L
Sbjct: 725 EA-IKQFQNCLDLNPKNEIC--YLKIGDVYRKKAMINEAISAYKKCLEINPKNDICCLSL 781

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           G       +I +A E      +I+P++   +++LG L
Sbjct: 782 GICLENSNKINEAIECYLNCIEINPQNDICYMNLGNL 818


>gi|42527576|ref|NP_972674.1| TPR [Treponema denticola ATCC 35405]
 gi|449111419|ref|ZP_21748016.1| hypothetical protein HMPREF9735_01065 [Treponema denticola ATCC
           33521]
 gi|449113766|ref|ZP_21750249.1| hypothetical protein HMPREF9721_00767 [Treponema denticola ATCC
           35404]
 gi|41818161|gb|AAS12585.1| TPR domain protein [Treponema denticola ATCC 35405]
 gi|448957849|gb|EMB38588.1| hypothetical protein HMPREF9721_00767 [Treponema denticola ATCC
           35404]
 gi|448958446|gb|EMB39177.1| hypothetical protein HMPREF9735_01065 [Treponema denticola ATCC
           33521]
          Length = 417

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 152/347 (43%), Gaps = 21/347 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 213 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 268
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 389 TARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
           T  T LK  G+      V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTGDTNYNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 400


>gi|118395433|ref|XP_001030066.1| SLEI family protein [Tetrahymena thermophila]
 gi|89284354|gb|EAR82403.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2397

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 123/526 (23%), Positives = 219/526 (41%), Gaps = 71/526 (13%)

Query: 80  MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEF 139
           M +  +   K      +  +E+A   +K VLE D  NV AL     +  ++ ++ +SLEF
Sbjct: 1   MEDSQSLCDKALDFQKQNLLEEAIECYKKVLEVDASNVEALYNLGLIHQSKKQHDESLEF 60

Query: 140 YKRALQVHPSCPGAIRLGIGLCR----YKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
             RA++ +P+      L   +C+     +   L +A    Q+AL++DP++ +A   L   
Sbjct: 61  LNRAIEKNPN-----YLNAYICKAENYLQKKMLDEAVACLQKALEIDPKSAKAHERLGFA 115

Query: 196 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
             + N      K ++  ++A EI P    A + L   F +  ++ +++Q  +    + N 
Sbjct: 116 YKKQNLT---NKAIQCFKKAIEIDPNFTEAHHNLG--FAYESKN-MIDQAYDCYKNILNI 169

Query: 256 GPTKSHSYYNLARSYHSKGD---------------------YEKAGLYYMAS------VK 288
            P   ++Y +LAR+Y++                        YE+ G  Y  +      +K
Sbjct: 170 DPNYVNTYISLARNYYTDYKIEDSIKYLKKAIEIDQNCVEAYERLGYVYQNTSKKEEAIK 229

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRS-----ALTNFEKVLEIYPDNCETLKALGHIYVQ 343
              K  E I P Y   Q  L L  +       ALT F+K +EI P + ++   +G +Y  
Sbjct: 230 HYKKAIE-IDPKYFNAQFNLGLLYYEEQKDDEALTYFQKAIEINPKSPDSYNNIGLVYYH 288

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP- 402
              I +A E  +KA  +DP+  +A+ +      S+      +  + A    KK+ E  P 
Sbjct: 289 KNMITEALEYYKKALDVDPQYHKAYHN------SALAYEKQNLIQNAIESYKKSIEMNPK 342

Query: 403 -IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
            ++ L N+G +  E+   +   + FK  +    +          Y     A + Q KDM 
Sbjct: 343 FLKSLTNLGDLCIEQNLADEGIECFKKIIQIDPY--------SHYDHFQLAFLYQDKDMN 394

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLL--EQIHDTVAASVLYRLILFKYQDYVDAYLR 519
                +     +EL         NL  +   +++ D  A S   + I     +Y  AY R
Sbjct: 395 E-EAVKTYKKVIELNPEYTNAYLNLGIIYSDQKMFDE-AQSCFKKAIQVD-PNYYKAYYR 451

Query: 520 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE--LKNDD 563
            A + + + N   +IE   +A+++N KY  +   L  L+  LKN D
Sbjct: 452 SAEVYELQGNTTEAIECYKKAIEINPKYTYSYVSLAMLQTILKNYD 497



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 159/411 (38%), Gaps = 95/411 (23%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LG++    ++ EE    A ++Y  A  +D     +++G G +  AKG  E+A   F    
Sbjct: 652 LGQLNQAIKQMEE----AIRFYLAAIELDPKCIKSYLGLGSIYSAKGINEKALECFSKAE 707

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           E D +N     G   + + +  Y  ++E + +AL+++P+   AI    GL   +  Q  K
Sbjct: 708 EIDANNAAIFNGIGFMYYTQKSYDQAIENFNKALEINPNYELAIYYT-GLVYQQKNQNDK 766

Query: 171 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
           A + +Q+ LQ+ P + +A V +     Q N+         K                  A
Sbjct: 767 ALECYQKVLQIKPNDKKAKVRI----FQINQKNQQEDKTPKT-----------------A 805

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
             F+  G  + ++   E ++           +YY           Y+K GL Y       
Sbjct: 806 KEFYQQGYKYYIQLKDEQSIECLQKALELDPNYYEA---------YDKLGLIYKEK---- 852

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-------- 342
                             K+  F  A+ N++KVLEI PD  + +K + +IY+        
Sbjct: 853 ------------------KM--FDEAIVNYKKVLEINPDCLDIIKTVMNIYLDRKMLDEA 892

Query: 343 ---------------QLGQIEKAQELL-------RKAAKIDPRDAQAFIDLGELLIS-SD 379
                          +   + K+Q +        +K  ++DP D  A I LG L ++  D
Sbjct: 893 KAFYDEVPKNLDTYYEFADVYKSQNMFEESVTNYKKVLELDPNDIDAHILLGSLYLNKPD 952

Query: 380 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              AL+ ++    +  K          NN+G+++F +   + A + F  AL
Sbjct: 953 YEKALECYQNILNIDSKQA-----VAYNNMGLVYFRQNIDDQALEYFNKAL 998



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/359 (21%), Positives = 152/359 (42%), Gaps = 48/359 (13%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG +     +KEE    A ++Y KA  ID    +     G L   + + ++A + F+
Sbjct: 211 YERLGYVYQNTSKKEE----AIKHYKKAIEIDPKYFNAQFNLGLLYYEEQKDDEALTYFQ 266

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             +E +  +  +      V +++   +++LE+YK+AL V P    A      L   K   
Sbjct: 267 KAIEINPKSPDSYNNIGLVYYHKNMITEALEYYKKALDVDPQYHKAYH-NSALAYEKQNL 325

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
           +  A ++++++++++P+ +++L  L  + ++ N A    +G+E  ++  +I PY      
Sbjct: 326 IQNAIESYKKSIEMNPKFLKSLTNLGDLCIEQNLA---DEGIECFKKIIQIDPYSHY--- 379

Query: 228 YLANHF---FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY-------------- 270
              +HF   F      + E+  +T   V    P  +++Y NL   Y              
Sbjct: 380 ---DHFQLAFLYQDKDMNEEAVKTYKKVIELNPEYTNAYLNLGIIYSDQKMFDEAQSCFK 436

Query: 271 --------HSKGDYEKAGLYYM---------ASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
                   + K  Y  A +Y +            K I    ++ + Y  L  +Q  L ++
Sbjct: 437 KAIQVDPNYYKAYYRSAEVYELQGNTTEAIECYKKAIEINPKYTYSYVSLAMLQTILKNY 496

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             A+  ++ VL I  +N   L  LG+IY      ++A +  +K  ++D  D   + +LG
Sbjct: 497 DEAIACYQNVLAIEENNLSALNNLGYIYYLKNMYDEALDYFKKRLQLDTTDYLIYYNLG 555



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 139/355 (39%), Gaps = 65/355 (18%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y K   +D ++    +  G L L K + E+A   ++ +L  D     A      V F + 
Sbjct: 926  YKKVLELDPNDIDAHILLGSLYLNKPDYEKALECYQNILNIDSKQAVAYNNMGLVYFRQN 985

Query: 132  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
                +LE++ +AL+V+P    +I    GL   K  Q  KA + + + L ++P   + L  
Sbjct: 986  IDDQALEYFNKALEVNPKYELSI-YNSGLVYEKKNQKDKALELYNQVLAINPTEKKTLAR 1044

Query: 192  LAV-------------------------------------------MDL---QANEAAGI 205
            + +                                           +DL   QA E  G+
Sbjct: 1045 MEILKKKEQEQEQKLETAKDYLDQGFKYYNQMKDEESINCYKKALELDLNYFQAYEKLGL 1104

Query: 206  --------RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
                     + +E  ++A EI P C  A+  + N        +L +++ + A       P
Sbjct: 1105 LHKTNKKFDEAVENYKKAIEINPKCFSAMKAVMN-------LYLDKKMIKEAQEFCEFVP 1157

Query: 258  TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
              + +YY L R+Y  +   + A + Y  ++ +++  H  I  Y  LG   L    F  AL
Sbjct: 1158 KCTEAYYELGRTYEEQNMLDDAIVNYKKAI-QLDPSH--INSYIYLGNSYLDKLQFDLAL 1214

Query: 318  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             +++K++EI P        +G +Y + G  + A E  +KA  +DP    A  + G
Sbjct: 1215 DSYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAALEYYKKALDVDPHYELALFNSG 1269



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 97/430 (22%), Positives = 170/430 (39%), Gaps = 80/430 (18%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q + KA  ID +        G    +K  ++QA   +K +L  D + V   +  A   
Sbjct: 125 AIQCFKKAIEIDPNFTEAHHNLGFAYESKNMIDQAYDCYKNILNIDPNYVNTYISLARNY 184

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQA---FQRALQLDP 183
           +   +  DS+++ K+A+++  +C  A  RLG     Y      K  +A   +++A+++DP
Sbjct: 185 YTDYKIEDSIKYLKKAIEIDQNCVEAYERLG-----YVYQNTSKKEEAIKHYKKAIEIDP 239

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           +   A   L ++     E     + +   Q+A EI P    + N +     +  ++ + E
Sbjct: 240 KYFNAQFNLGLL---YYEEQKDDEALTYFQKAIEINPKSPDSYNNIG--LVYYHKNMITE 294

Query: 244 QLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------------- 288
            L   + AL V    P    +Y+N A +Y  +   + A   Y  S++             
Sbjct: 295 ALEYYKKALDV---DPQYHKAYHNSALAYEKQNLIQNAIESYKKSIEMNPKFLKSLTNLG 351

Query: 289 -------------EINKPHEFIFPYYGLGQVQLKL----GDFR-SALTNFEKVLEIYPDN 330
                        E  K    I PY      QL       D    A+  ++KV+E+ P+ 
Sbjct: 352 DLCIEQNLADEGIECFKKIIQIDPYSHYDHFQLAFLYQDKDMNEEAVKTYKKVIELNPEY 411

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKT 389
                 LG IY      ++AQ   +KA ++DP   +A+    E+  +  +T  A++ +K 
Sbjct: 412 TNAYLNLGIIYSDQKMFDEAQSCFKKAIQVDPNYYKAYYRSAEVYELQGNTTEAIECYKK 471

Query: 390 A-----------------RTLLKK------------AGEEVPIEVLNNIGVIHFEKGEFE 420
           A                 +T+LK             A EE  +  LNN+G I++ K  ++
Sbjct: 472 AIEINPKYTYSYVSLAMLQTILKNYDEAIACYQNVLAIEENNLSALNNLGYIYYLKNMYD 531

Query: 421 SAHQSFKDAL 430
            A   FK  L
Sbjct: 532 EALDYFKKRL 541



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 77/361 (21%), Positives = 148/361 (40%), Gaps = 18/361 (4%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y +A  +D    + ++  G   L K   +QA   +K +LE D     A      V F++ 
Sbjct: 1714 YQRAIELDSKYINAYIQLGNAYLDKPMFDQALETYKKILEIDPQKPVAYNNIGLVYFDQN 1773

Query: 132  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               ++LE + +AL+++P    ++    GL   +  Q  KA + + + L+++P    +L  
Sbjct: 1774 MNDEALEQFNKALEINPKYELSL-YNSGLVYERKNQTDKALECYNKVLEINPTESRSLAR 1832

Query: 192  LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
               +  + N +      ++ +Q  F           Y  +  F        ++  E    
Sbjct: 1833 KRALQKKNNSSNNGFDFLDDLQNKFGSSNKSTAEQQY--SQAFLYYMQMEDDKSIECLKK 1890

Query: 252  VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
                 P    +Y  L   Y  +  +++A  +Y   +K   K  E I     + Q +  + 
Sbjct: 1891 AIEIDPNYYAAYERLGFVYSQQKKFDEAIEFYQKGIKVNPKGMECIRSLVKIYQDKFMVN 1950

Query: 312  DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
            + +       K LE Y +       L  IY +    E+A +  +KA ++DP    A+I+L
Sbjct: 1951 EAKEFFNQIPKCLETYYE-------LATIYSECKMTEEAIDYFQKAIELDPLYINAYIEL 2003

Query: 372  GEL-LISSDTGAALDAF-KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
            G L L  ++   AL+ + K  +   +KA         NNIG++H+++   + A + +  A
Sbjct: 2004 GNLHLGKAEYDQALECYQKIIQINPQKAV------AYNNIGLVHYKQKMDDKAIEYYNKA 2057

Query: 430  L 430
            L
Sbjct: 2058 L 2058



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 80/377 (21%), Positives = 149/377 (39%), Gaps = 76/377 (20%)

Query: 44   LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
            L  YY  L K+   Q   +E  +    YY K   +D    + ++  G   L K   +QA 
Sbjct: 1434 LDAYYK-LAKVYQDQNMLDESIV----YYKKVLELDSKYINAYIQLGNAYLDKPLYDQAM 1488

Query: 104  SAFKIVLEADRDNVPA--LLGQACVEFNRGRYSD----------------------SLEF 139
              ++ ++E D     A  +L +A  +FN+   +D                      +LE 
Sbjct: 1489 ECYQKIIEIDSKEPVAQNMLDEALEQFNKAIEADPEYELSIYNSGLVYEKKHQKDKALEC 1548

Query: 140  YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR--------------------------- 172
            Y RAL+++P+    +   +   + K G+  +                             
Sbjct: 1549 YNRALEINPAHKNTLS-RLNKLKKKTGKQAQGTDKEEQQEKNLQTAKDYYEEGYKYYTEL 1607

Query: 173  ------QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
                  +   +A++LDP   EA   L ++ L+AN      + ++  ++A E+ P C  A+
Sbjct: 1608 NDDESIKCLNKAIELDPNYSEAYDKLGLV-LKANR--KYEEAIQSYKKAIEVNPKCFAAM 1664

Query: 227  NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
              + N++       L  ++   A    ++ P    ++Y+L R Y  +   ++A   Y  +
Sbjct: 1665 EAVMNYY-------LDRKMINEAKEFYDYVPKCVETHYHLGRVYQDQNMLDEAIGSYQRA 1717

Query: 287  VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
            ++  +K   +I  Y  LG   L    F  AL  ++K+LEI P        +G +Y     
Sbjct: 1718 IELDSK---YINAYIQLGNAYLDKPMFDQALETYKKILEIDPQKPVAYNNIGLVYFDQNM 1774

Query: 347  IEKAQELLRKAAKIDPR 363
             ++A E   KA +I+P+
Sbjct: 1775 NDEALEQFNKALEINPK 1791



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 92/429 (21%), Positives = 170/429 (39%), Gaps = 82/429 (19%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y K+  ++     +    G L + +   ++    FK +++ D  +       A + 
Sbjct: 329 AIESYKKSIEMNPKFLKSLTNLGDLCIEQNLADEGIECFKKIIQIDPYSHYDHFQLAFLY 388

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            ++    ++++ YK+ ++++P    A  L +G+         +A+  F++A+Q+DP   +
Sbjct: 389 QDKDMNEEAVKTYKKVIELNPEYTNA-YLNLGIIYSDQKMFDEAQSCFKKAIQVDPNYYK 447

Query: 188 ALVALA-VMDLQANEAAGIRKGMEKMQRAFEI-----YPYCAMAL--NYLANHFFFTGQH 239
           A    A V +LQ N    I    E  ++A EI     Y Y ++A+    L N+      +
Sbjct: 448 AYYRSAEVYELQGNTTEAI----ECYKKAIEINPKYTYSYVSLAMLQTILKNYDEAIACY 503

Query: 240 FLVEQLTETALAVTNH------------------------GPTKSHSYYNLARSYHSKGD 275
             V  + E  L+  N+                          T    YYNL  +Y SK  
Sbjct: 504 QNVLAIEENNLSALNNLGYIYYLKNMYDEALDYFKKRLQLDTTDYLIYYNLGATYESKNM 563

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
            E+A  YY  + +E+N  H   F   G    Q  +     A   + KV      N   L 
Sbjct: 564 LEEALEYYKKT-EEMNPNHITTFIRQGNAYSQKNMQ--SEAFECYNKV------NDSNLS 614

Query: 336 AL--GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL------------------- 374
            L    ++VQ   I++  +   K  +++P+  QAF +LG+L                   
Sbjct: 615 TLFEDELFVQTNMIKECIKCYEKTIQLNPKYTQAFCNLGQLNQAIKQMEEAIRFYLAAIE 674

Query: 375 ----LISSDTGAALDAFKTARTLLKKA------GEEVPIE---VLNNIGVIHFEKGEFES 421
                I S  G  L +  +A+ + +KA       EE+      + N IG +++ +  ++ 
Sbjct: 675 LDPKCIKSYLG--LGSIYSAKGINEKALECFSKAEEIDANNAAIFNGIGFMYYTQKSYDQ 732

Query: 422 AHQSFKDAL 430
           A ++F  AL
Sbjct: 733 AIENFNKAL 741



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 145/349 (41%), Gaps = 42/349 (12%)

Query: 35   YERIAILNAL-GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 93
            Y++I  +N    V Y  +G +  KQ+  ++    A +YYNKA  +D +   ++   G + 
Sbjct: 2020 YQKIIQINPQKAVAYNNIGLVHYKQKMDDK----AIEYYNKALELDPNYDLSYYNSGLVY 2075

Query: 94   LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS----------------- 136
              K + ++A   +K VL+ +  +   L     ++ N G   D+                 
Sbjct: 2076 EQKKDFDKALECYKKVLKINPKDKKTLNRINLIKKNNGDKIDNQTKEDEVSEPEDYDDDY 2135

Query: 137  --LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
               +  K+ LQ             G   Y   +  +  +  ++A+++DP+  EA   L +
Sbjct: 2136 EDGDEQKKDLQTAED-----YYNQGFKYYNQMKDQECIKCLKKAIEIDPKYSEAYDKLGL 2190

Query: 195  MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
            +     E     + +E  ++A E  P    +++ L   +       + +++TE A    N
Sbjct: 2191 V---YEENEQFEEAIECYKKAIEHKPNSLDSISALMTLY-------INQKMTEEAKEFYN 2240

Query: 255  HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
                 +  YY LAR Y  K   ++A     +  K I    +++  Y  LG +      + 
Sbjct: 2241 SVQQSADIYYELARVYEDKSMVDEAI---SSHKKAIELDPKYVNSYIQLGNIYSDKASYE 2297

Query: 315  SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
             A   ++K+LEI P+N      +G IY   G+ ++A E   KA +I+P+
Sbjct: 2298 QATEYYQKILEIEPNNEIAYNNIGLIYYDQGKNDQALEQYNKALEINPK 2346



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 1/124 (0%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y KA ++D    ++++  G   L K + + A  ++K ++E D     A      V   +G
Sbjct: 1183 YKKAIQLDPSHINSYIYLGNSYLDKLQFDLALDSYKKIIEIDPKKAVAYNNVGVVYNKQG 1242

Query: 132  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
             Y  +LE+YK+AL V P    A+    GL   K G+  KA + F + L+++P   ++L  
Sbjct: 1243 LYDAALEYYKKALDVDPHYELAL-FNSGLVYEKKGEQDKALEFFYKTLEINPTEKKSLNR 1301

Query: 192  LAVM 195
            + V+
Sbjct: 1302 IKVI 1305



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 123/313 (39%), Gaps = 54/313 (17%)

Query: 100  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            E++ + +K  LE D +   A      +     ++ +++E YK+A++++P C  A++  + 
Sbjct: 1079 EESINCYKKALELDLNYFQAYEKLGLLHKTNKKFDEAVENYKKAIEINPKCFSAMKAVMN 1138

Query: 160  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
            L  Y   ++ K  Q F    +  P+  EA   L        E   +   +   ++A ++ 
Sbjct: 1139 L--YLDKKMIKEAQEF---CEFVPKCTEAYYELGRT---YEEQNMLDDAIVNYKKAIQLD 1190

Query: 220  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
            P    +  YL N +    Q  L     ++   +    P K+ +Y N+   Y+ +G Y+ A
Sbjct: 1191 PSHINSYIYLGNSYLDKLQFDLA---LDSYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAA 1247

Query: 280  GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL-- 337
              YY  ++     PH +    +  G V  K G+   AL  F K LEI P   ++L  +  
Sbjct: 1248 LEYYKKALDV--DPH-YELALFNSGLVYEKKGEQDKALEFFYKTLEINPTEKKSLNRIKV 1304

Query: 338  --------------------------------------GHIYVQLGQIEKAQELLRKAAK 359
                                                  G  Y Q    +KA E L+KA +
Sbjct: 1305 IQQNKQTSKDDKEFSLFKDIFKKDKKKVLSTADDYYYEGFDYYQQQNDDKAIECLKKALE 1364

Query: 360  IDPRDAQAFIDLG 372
            IDP   +A+  LG
Sbjct: 1365 IDPNFYEAYDKLG 1377



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 77/354 (21%), Positives = 145/354 (40%), Gaps = 32/354 (9%)

Query: 5    YFKQG----KVEQFRQILEEGSSPEIDEYYADVRYERIAILN-ALGVYYTYLG------- 52
            YF Q      +EQF + LE     E+  Y + + YER    + AL  Y   L        
Sbjct: 1769 YFDQNMNDEALEQFNKALEINPKYELSLYNSGLVYERKNQTDKALECYNKVLEINPTESR 1828

Query: 53   ------KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 106
                   ++ K       F       NK    +         +  L   + E +++    
Sbjct: 1829 SLARKRALQKKNNSSNNGFDFLDDLQNKFGSSNKSTAEQQYSQAFLYYMQMEDDKSIECL 1888

Query: 107  KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
            K  +E D +   A      V   + ++ +++EFY++ ++V+P     IR  + + + K  
Sbjct: 1889 KKAIEIDPNYYAAYERLGFVYSQQKKFDEAIEFYQKGIKVNPKGMECIRSLVKIYQDKF- 1947

Query: 167  QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
             + +A++ F +     P+ +E    LA +    +E     + ++  Q+A E+ P    A 
Sbjct: 1948 MVNEAKEFFNQI----PKCLETYYELATI---YSECKMTEEAIDYFQKAIELDPLYINAY 2000

Query: 227  NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
              L N      ++   +Q  E    +    P K+ +Y N+   ++ +   +KA  YY  +
Sbjct: 2001 IELGNLHLGKAEY---DQALECYQKIIQINPQKAVAYNNIGLVHYKQKMDDKAIEYYNKA 2057

Query: 287  VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
            + E++  ++    YY  G V  +  DF  AL  ++KVL+I P + +TL  +  I
Sbjct: 2058 L-ELDPNYD--LSYYNSGLVYEQKKDFDKALECYKKVLKINPKDKKTLNRINLI 2108



 Score = 47.0 bits (110), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 107/530 (20%), Positives = 204/530 (38%), Gaps = 100/530 (18%)

Query: 136  SLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
            S+E  K+A+++ P+   A  RLG    + K  +  +A + +Q+ ++++P           
Sbjct: 1884 SIECLKKAIEIDPNYYAAYERLGFVYSQQK--KFDEAIEFYQKGIKVNP----------- 1930

Query: 195  MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
                        KGME ++   +IY                    F+V +  E      N
Sbjct: 1931 ------------KGMECIRSLVKIY-----------------QDKFMVNEAKE----FFN 1957

Query: 255  HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
              P    +YY LA  Y      E+A  Y+    K I     +I  Y  LG + L   ++ 
Sbjct: 1958 QIPKCLETYYELATIYSECKMTEEAIDYFQ---KAIELDPLYINAYIELGNLHLGKAEYD 2014

Query: 315  SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             AL  ++K+++I P        +G ++ +    +KA E   KA ++DP    ++ + G +
Sbjct: 2015 QALECYQKIIQINPQKAVAYNNIGLVHYKQKMDDKAIEYYNKALELDPNYDLSYYNSGLV 2074

Query: 375  L-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 433
                 D   AL+ +K    +  K       + LN I +I    G+ +  +Q+ +D +   
Sbjct: 2075 YEQKKDFDKALECYKKVLKINPKDK-----KTLNRINLIKKNNGD-KIDNQTKEDEV--- 2125

Query: 434  IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 493
                   S+ + Y  D      Q KD+Q    + N G                 +   Q+
Sbjct: 2126 -------SEPEDYDDDYEDGDEQKKDLQTAEDYYNQG----------------FKYYNQM 2162

Query: 494  HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 553
             D      L + I      Y +AY +L  + +     + +IE   +A++      +++S 
Sbjct: 2163 KDQECIKCLKKAIEID-PKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKPNSLDSISA 2221

Query: 554  LGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHL- 612
            L  L +      +AKE + +   + D     A +         A+ + K+A +L+  ++ 
Sbjct: 2222 LMTLYINQKMTEEAKEFYNSVQQSADIYYELARVYEDKSMVDEAISSHKKAIELDPKYVN 2281

Query: 613  ---------------EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 647
                           E+A E Y +++    +N  A N  G++  ++G+ D
Sbjct: 2282 SYIQLGNIYSDKASYEQATEYYQKILEIEPNNEIAYNNIGLIYYDQGKND 2331



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 114/528 (21%), Positives = 211/528 (39%), Gaps = 78/528 (14%)

Query: 92   LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
            L   + E +++    K  +E D +   A      V   + ++ +++EFY++ ++V+P   
Sbjct: 1874 LYYMQMEDDKSIECLKKAIEIDPNYYAAYERLGFVYSQQKKFDEAIEFYQKGIKVNPKGM 1933

Query: 152  GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
              IR  + + + K   + +A++ F +     P+ +E    LA +    +E     + ++ 
Sbjct: 1934 ECIRSLVKIYQDKF-MVNEAKEFFNQI----PKCLETYYELATI---YSECKMTEEAIDY 1985

Query: 212  MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
             Q+A E+ P    A   L N      ++   +Q  E    +    P K+ +Y N+   ++
Sbjct: 1986 FQKAIELDPLYINAYIELGNLHLGKAEY---DQALECYQKIIQINPQKAVAYNNIGLVHY 2042

Query: 272  SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
             +   +KA  YY  ++ E++  ++    YY  G V  +  DF  AL  ++KVL+I P + 
Sbjct: 2043 KQKMDDKAIEYYNKAL-ELDPNYDL--SYYNSGLVYEQKKDFDKALECYKKVLKINPKDK 2099

Query: 332  ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD----AF 387
            +TL  +  I    G     Q    K  ++   +              D   A D     F
Sbjct: 2100 KTLNRINLIKKNNGDKIDNQ---TKEDEVSEPEDYDDDYEDGDEQKKDLQTAEDYYNQGF 2156

Query: 388  KTARTL--------LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 437
            K    +        LKKA E  P   E  + +G+++ E  +FE A + +K A+       
Sbjct: 2157 KYYNQMKDQECIKCLKKAIEIDPKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKP--N 2214

Query: 438  LLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 497
             LDS         SA M  + + ++    +   N V+       + + LAR+ E      
Sbjct: 2215 SLDS--------ISALMTLYINQKMTEEAKEFYNSVQ---QSADIYYELARVYEDKSMVD 2263

Query: 498  AASVLYRLILFKYQDYVDAYLRLAAIAK------------------------ARNNLQL- 532
             A   ++  +     YV++Y++L  I                          A NN+ L 
Sbjct: 2264 EAISSHKKAIELDPKYVNSYIQLGNIYSDKASYEQATEYYQKILEIEPNNEIAYNNIGLI 2323

Query: 533  ---------SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 571
                     ++E  N+AL++N KY  +L   G +  K D + KA E +
Sbjct: 2324 YYDQGKNDQALEQYNKALEINPKYELSLYNSGLVYEKKDQYEKALEFY 2371



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 74   KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
            KA  +D    ++++  G +   K   EQA+  ++ +LE + +N  A      + +++G+ 
Sbjct: 2271 KAIELDPKYVNSYIQLGNIYSDKASYEQATEYYQKILEIEPNNEIAYNNIGLIYYDQGKN 2330

Query: 134  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
              +LE Y +AL+++P    ++    GL   K  Q  KA + + + L ++P    +L  + 
Sbjct: 2331 DQALEQYNKALEINPKYELSL-YNSGLVYEKKDQYEKALEFYNKVLSINPTERRSLNRIK 2389

Query: 194  VM 195
            +M
Sbjct: 2390 LM 2391


>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
 gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 1421

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 112/540 (20%), Positives = 213/540 (39%), Gaps = 79/540 (14%)

Query: 42   NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 101
            N LG  Y  LG+           F  A + +++A ++D  +   +   G +    G+ + 
Sbjct: 932  NNLGAAYVELGE-----------FNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQG 980

Query: 102  ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
            A + +   ++ + +   A   +       G   D++  + + LQ+HP    A     G+ 
Sbjct: 981  AIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVVDAYTQR-GIV 1039

Query: 162  RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            R+++  +  A   F  A++L+P++ EA+   A++     +  G    ++ + +  +++P 
Sbjct: 1040 RFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQG---SLDDLNKVIQLHPK 1096

Query: 222  CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
               A    +   F  G H    +  ++A+ +    P  + +YY  A +  S GD   A  
Sbjct: 1097 YIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQ---PNNAEAYYQRANTKRSMGDILSAIA 1153

Query: 282  YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
             +  +++   K H+    Y  +G V+L+ GD   A+ NFE  ++I P+  E     G   
Sbjct: 1154 DFENAIRLNPKYHQ---AYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGFTK 1210

Query: 342  VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEV 401
             + G I  A +    A +I+P  A+A+                                 
Sbjct: 1211 FRRGDIPGAMKDFEAAIQINPNYAEAY--------------------------------- 1237

Query: 402  PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
                 NN+G   F+ G+F+ A + F + L        +  K      + + ++L+  D  
Sbjct: 1238 -----NNLGNSRFQTGDFQGAMRDFGETLR-------IHPKYVPAYNNRALALLKLGD-- 1283

Query: 462  LFHRFENDGNHVELPWNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
             F     D  +  L  N    L  +NL  +  ++ D   A + Y  +L  Y   +DAY+ 
Sbjct: 1284 -FSGATTDC-YQALKINPKYGLAYYNLGLIHTEMGDLEQAILDYNEVLRIYPRKIDAYVN 1341

Query: 520  LAAIAKARNNLQLSIELVNEALKVNGKYPNALSM-------LGDLELKNDDWVKAKETFR 572
               I     N   +I+    AL +N   P+  S        LG+ +   DD  KA E ++
Sbjct: 1342 RGLIYLKLKNYTQAIKDQTSALNINPNLPHVYSFRSEGYIQLGEFKAGIDDLHKAAEIYQ 1401



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 105/507 (20%), Positives = 204/507 (40%), Gaps = 81/507 (15%)

Query: 309  KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
            ++G+ + A+ NF+K LE+ P + +T   LG  YV+LG+  +A EL  +A K+D +D+Q +
Sbjct: 906  QMGNLKGAIENFKKALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIY 965

Query: 369  IDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
             +LG +   + D   A+  +  A  L        P E   N G+ +   G  + A   F 
Sbjct: 966  QNLGVVRFKAGDKQGAIADYNQAIKL----NPNKP-EAYYNRGIAYRFLGHNQDAMNDFT 1020

Query: 428  DALGDGIWLTLLDSKTKTYVI-----DASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
              L   +   ++D+ T+  ++     D   ++  F D       + +  H E  +N+  +
Sbjct: 1021 KVL--QLHPRVVDAYTQRGIVRFEVKDIEGAIADFNDA-----IKLNPKHPEAIYNRAII 1073

Query: 483  ----------LFNLARLLEQIHDTVAASVLYRLILFKYQDY-----------------VD 515
                      L +L ++++     + A +   ++ F   D+                  +
Sbjct: 1074 RRLTKDNQGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAE 1133

Query: 516  AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA- 574
            AY + A   ++  ++  +I     A+++N KY  A + +G + L+  D   A E F AA 
Sbjct: 1134 AYYQRANTKRSMGDILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAI 1193

Query: 575  ---SDATDG------------------KDSYATLSLGNWNYFAALRNEKRAPKLEATHLE 613
                +  +G                  KD  A + + N NY  A  N   + + +    +
Sbjct: 1194 QINPNYAEGHNNRGFTKFRRGDIPGAMKDFEAAIQI-NPNYAEAYNNLGNS-RFQTGDFQ 1251

Query: 614  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD-VSKDLFTQVQEAASGSVFVQMPDVW 672
             A   +   +  H   + A N   + L + G F   + D +  ++      +       +
Sbjct: 1252 GAMRDFGETLRIHPKYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGL------AY 1305

Query: 673  INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQI---LLYLARTHYEAEQWQDCKKSLL 729
             NL  ++   G+   A+  Y   LR +    DA +   L+YL   +Y  +  +D   +L 
Sbjct: 1306 YNLGLIHTEMGDLEQAILDYNEVLRIYPRKIDAYVNRGLIYLKLKNY-TQAIKDQTSALN 1364

Query: 730  RAIHLAPSNYTLRFDAGVAMQKFSAST 756
               +L P  Y+ R +  + + +F A  
Sbjct: 1365 INPNL-PHVYSFRSEGYIQLGEFKAGI 1390


>gi|428775101|ref|YP_007166888.1| hypothetical protein PCC7418_0444 [Halothece sp. PCC 7418]
 gi|428689380|gb|AFZ42674.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
           PCC 7418]
          Length = 314

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 140/331 (42%), Gaps = 47/331 (14%)

Query: 70  QYYNKASRIDMHEP---STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           Q  NK  +I +  P    T    G + LA+ E E+A +A++  +E    N  A  G    
Sbjct: 28  QALNKIEQILIISPDHAPTLNQLGAIHLARKEFEKAIAAYQKNIEFKPKNAQAYHGLGDA 87

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
                 +++++  Y++AL+++P  P  +   +G    + GQ   A  A+Q+A++L+P   
Sbjct: 88  YLGMNNFTEAITAYQKALEINPQLPPYVHKKLGDAFQQAGQKQAAITAYQKAVELNPNQA 147

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
                L  + LQ N     ++ +   Q+A EI P                       QL 
Sbjct: 148 GFYNVLGDVYLQTNNP---KEAITAYQKALEINP-----------------------QL- 180

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
                     P   H    L  +    G  E+A   Y +++  +N    ++  Y+ LGQ+
Sbjct: 181 ----------PPYVHK--KLGDALKQGGQIEEAIATYQSAIA-LNPDKPWL--YHALGQI 225

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
             +      A+T FE  +E+  DN    + LG +Y + G++++A +  + A  + P + Q
Sbjct: 226 YFQTNQLAEAVTAFETFVELKNDNPNVYQKLGQVYHKQGKVKEASQCYKNAIALKPENPQ 285

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKKA 397
            +  +G+L +  + G    A K  R  L ++
Sbjct: 286 VYRLIGDLFL--ENGREEQALKAYRRALSQS 314



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 10/129 (7%)

Query: 306 VQLK-LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
           +QLK  G    AL   E++L I PD+  TL  LG I++   + EKA    +K  +  P++
Sbjct: 18  IQLKNKGQLDQALNKIEQILIISPDHAPTLNQLGAIHLARKEFEKAIAAYQKNIEFKPKN 77

Query: 365 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE---EVPIEVLNNIGVIHFEKGEFES 421
           AQA+  LG      D    ++ F  A T  +KA E   ++P  V   +G    + G+ ++
Sbjct: 78  AQAYHGLG------DAYLGMNNFTEAITAYQKALEINPQLPPYVHKKLGDAFQQAGQKQA 131

Query: 422 AHQSFKDAL 430
           A  +++ A+
Sbjct: 132 AITAYQKAV 140


>gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102]
 gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 532

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 139/331 (41%), Gaps = 55/331 (16%)

Query: 42  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 101
           NALGV     GK+             A   Y KA +ID +  +     G+ L  +G++ +
Sbjct: 204 NALGVVLHTQGKLSE-----------AIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSE 252

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A +A++  L  D ++            ++G+ S+++  Y++ALQ+ P+   A    +G  
Sbjct: 253 AMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQKALQIDPNYVNA-HCNLGKA 311

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            +  G+L +A  A+QRAL++DP    A   L V      +   + + +   Q+A +I P 
Sbjct: 312 LHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGK---LSEAIAAYQKALQIDP- 367

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
                NY+  H                                NL ++ H++G   +A  
Sbjct: 368 -----NYVNAHC-------------------------------NLGKALHTQGKLSEAMA 391

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
            Y  +++    P+ +   +  LG      G    A+  +++ L + P++ +T   LG   
Sbjct: 392 AYQRALRV--DPN-YASAHCNLGVTLYHQGKLSEAIAAYQRALRLDPNDADTHCNLGIAL 448

Query: 342 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
              G++ +A    ++A  IDP DA A  +LG
Sbjct: 449 HDQGKLSEAIAAYQRALLIDPNDADAHCNLG 479



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 16/278 (5%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
           ++E+A   +K  L  D ++V A      V   +G+ S+++  Y++ALQ+ P+   A    
Sbjct: 181 KLEEAVVKYKAALSLDPNSVYAHNALGVVLHTQGKLSEAIAAYQKALQIDPNYVNA-HCN 239

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +G   +  G+L +A  A+QRAL+LDP + +    L +     ++   + + +   Q+A +
Sbjct: 240 LGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIA---LHDQGKLSEAIAAYQKALQ 296

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALA---VTNHGPTKSHSYYNLARSYHSKG 274
           I P      NY+  H           +L+E   A        P  + ++ NL  + + +G
Sbjct: 297 IDP------NYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQG 350

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
              +A   Y    K +     ++  +  LG+     G    A+  +++ L + P+     
Sbjct: 351 KLSEAIAAYQ---KALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAH 407

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             LG      G++ +A    ++A ++DP DA    +LG
Sbjct: 408 CNLGVTLYHQGKLSEAIAAYQRALRLDPNDADTHCNLG 445



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y KA +ID +  +     G+ L  +G++ +A +A++  L  D +   A        
Sbjct: 355 AIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTL 414

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           +++G+ S+++  Y+RAL++ P+        +G+  +  G+L +A  A+QRAL +DP + +
Sbjct: 415 YHQGKLSEAIAAYQRALRLDPN-DADTHCNLGIALHDQGKLSEAIAAYQRALLIDPNDAD 473

Query: 188 ALVALAV 194
           A   L +
Sbjct: 474 AHCNLGI 480



 Score = 39.7 bits (91), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 75/176 (42%), Gaps = 11/176 (6%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P   +++  L    H++G   +A   Y    K +     ++  +  LG+     G    A
Sbjct: 197 PNSVYAHNALGVVLHTQGKLSEAIAAYQ---KALQIDPNYVNAHCNLGKALHTQGKLSEA 253

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL- 375
           +  +++ L + P++ +T   LG      G++ +A    +KA +IDP    A  +LG+ L 
Sbjct: 254 MAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALH 313

Query: 376 ISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                  A+ A++ A R     A          N+GV  + +G+   A  +++ AL
Sbjct: 314 TQGKLSEAMAAYQRALRVDPNYASAHC------NLGVTLYHQGKLSEAIAAYQKAL 363


>gi|392410767|ref|YP_006447374.1| Tfp pilus assembly protein PilF [Desulfomonile tiedjei DSM 6799]
 gi|390623903|gb|AFM25110.1| Tfp pilus assembly protein PilF [Desulfomonile tiedjei DSM 6799]
          Length = 481

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 140/332 (42%), Gaps = 32/332 (9%)

Query: 35  YERIAILNALGVYYTY-LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 93
           Y R  + +   +   Y    ++++Q + +E    A +  N+  RID  +    V  G++ 
Sbjct: 113 YSRALVCDPQNITALYNRASLKSRQNQNKE----ALEDINQVLRIDPRQKKARVLLGKIH 168

Query: 94  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
           +  G  ++A   F+ VL  D + V AL G     F   R+S+++ +Y  AL+  P+    
Sbjct: 169 IVSGLPDKALKEFQTVLTGDPEQVEALAGSGDAHFLSSRFSEAVTYYSEALKRQPTP--- 225

Query: 154 IRLGIGLCR--YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
             L +  C    KL    KA +    +++LDP N E    L              + + +
Sbjct: 226 -LLYMNRCSALLKLNDPDKALEDCTESVRLDPNNPEGFYNLG----------NCMQALNR 274

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA------VTNHGPTKSHSYYN 265
              A E +   A+ +N     +F+  +   + +L E+  A      V +  P  + +  N
Sbjct: 275 HTEAVEAFSK-AIEINEQTPRYFY-NRGVSLSKLGESEKAGRDFDQVLHMNPKHAEALTN 332

Query: 266 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
               Y   GD + A   +    K I    + +  Y  L  V LK      ++   E+ L+
Sbjct: 333 RGVIYWMSGDTQSATQDF---TKAIEHDSKHVLAYVNLASVYLKDNQVDESIAVLERALK 389

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           + P + E L +LGH +++ G+++KA    +KA
Sbjct: 390 VAPKDREVLLSLGHAWMEKGKLDKALSFYKKA 421



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 142/347 (40%), Gaps = 25/347 (7%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVH 147
           + +  +  G+  +A        E D  N PA+     V   + R +  +LE + RAL+  
Sbjct: 28  RAETAIRSGDTTEAMELLDKAEELDPKN-PAISNNKGVIHAKNRDWDAALESFNRALEFD 86

Query: 148 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 207
           P+   A     G+   + G   +A   + RAL  DP+N+ AL   A +  + N+    ++
Sbjct: 87  PAYAEAYT-NRGMVYQEQGDFSQALLDYSRALVCDPQNITALYNRASLKSRQNQN---KE 142

Query: 208 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL----AVTNHGPTKSHSY 263
            +E + +   I P    A   L       G+  +V  L + AL     V    P +  + 
Sbjct: 143 ALEDINQVLRIDPRQKKARVLL-------GKIHIVSGLPDKALKEFQTVLTGDPEQVEAL 195

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
                ++     + +A  YY  ++K    P      Y       LKL D   AL +  + 
Sbjct: 196 AGSGDAHFLSSRFSEAVTYYSEALKRQPTP----LLYMNRCSALLKLNDPDKALEDCTES 251

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 383
           + + P+N E    LG+    L +  +A E   KA +I+ +  + F + G  L  S  G +
Sbjct: 252 VRLDPNNPEGFYNLGNCMQALNRHTEAVEAFSKAIEINEQTPRYFYNRGVSL--SKLGES 309

Query: 384 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             A +    +L    +    E L N GVI++  G+ +SA Q F  A+
Sbjct: 310 EKAGRDFDQVLHMNPKHA--EALTNRGVIYWMSGDTQSATQDFTKAI 354



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 114/279 (40%), Gaps = 25/279 (8%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y   G V  + GDF  AL ++ + L   P N   L     +  +  Q ++A E + +  +
Sbjct: 93  YTNRGMVYQEQGDFSQALLDYSRALVCDPQNITALYNRASLKSRQNQNKEALEDINQVLR 152

Query: 360 IDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
           IDPR  +A + LG++ ++S     AL  F+T  T     G+   +E L   G  HF    
Sbjct: 153 IDPRQKKARVLLGKIHIVSGLPDKALKEFQTVLT-----GDPEQVEALAGSGDAHFLSSR 207

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
           F  A   + +AL            T    ++  +++L+  D       E+    V L  N
Sbjct: 208 FSEAVTYYSEALK--------RQPTPLLYMNRCSALLKLNDPD--KALEDCTESVRLDPN 257

Query: 479 KVTVLFNLARLLEQIH-DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
                +NL   ++ ++  T A     + I    Q     Y R  +++K   + +   +  
Sbjct: 258 NPEGFYNLGNCMQALNRHTEAVEAFSKAIEINEQTPRYFYNRGVSLSKLGESEKAGRDF- 316

Query: 538 NEALKVNGKYPNALS-------MLGDLELKNDDWVKAKE 569
           ++ L +N K+  AL+       M GD +    D+ KA E
Sbjct: 317 DQVLHMNPKHAEALTNRGVIYWMSGDTQSATQDFTKAIE 355


>gi|124024099|ref|YP_001018406.1| hypothetical protein P9303_24081 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964385|gb|ABM79141.1| Hypothetical protein P9303_24081 [Prochlorococcus marinus str. MIT
           9303]
          Length = 764

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 157/351 (44%), Gaps = 46/351 (13%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +GE++QA + ++ VL  D +N  AL    C++  + R+ D++     A+   P  P A  
Sbjct: 19  QGELDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDDAITLLSSAVSAQPGNPDA-- 76

Query: 156 LGIGLCRYKLGQLGK-------ARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIR 206
                  Y LG + K       A   +++ L L  E  EAL  + + + + +  E + I 
Sbjct: 77  ------NYNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGICLKETEQYEHSEI- 129

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ--LTETALAVTNH---GPTKSH 261
                ++RA    P  A A   L N         L EQ   +E  ++  N     P  + 
Sbjct: 130 ----VLKRAISRQPRFAAAWLNLGNT--------LKEQKKYSEAIVSYRNAIEVKPDFAE 177

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           +Y NL      +G  E+A   Y  +++   KP +    Y+ LG V    G+   A+ ++ 
Sbjct: 178 AYLNLGNVLKEEGAVEEAIASYRKAIEV--KP-DCAGAYFSLGFVLKGEGEVEEAIVSYR 234

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
             +E+ PD  E    LG++  + G +E+A    R+A ++ P  A A+++LG +L      
Sbjct: 235 NAIEVKPDLAEAYLNLGYVLKEEGDVEEAIASYRQAIEVKPEFADAYLNLGNVLEEEGEI 294

Query: 382 AALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                 + A    ++A E  P  +E  +++G + +E G++ S+ + F+ AL
Sbjct: 295 ------EEAIASYRQAIEVNPDFVEAYSDLGKLFYEGGDYMSSIEFFQKAL 339



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 27/281 (9%)

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y LG V      +  A++ +EK L++  +  E L  LG    +  Q E ++ +L++A   
Sbjct: 78  YNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGICLKETEQYEHSEIVLKRAISR 137

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGE 418
            PR A A+++LG  L           +  A    + A E  P   E   N+G +  E+G 
Sbjct: 138 QPRFAAAWLNLGNTLKEQKK------YSEAIVSYRNAIEVKPDFAEAYLNLGNVLKEEGA 191

Query: 419 FESAHQSFKDAL-----GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 473
            E A  S++ A+       G + +L       +V+       + ++  + +R     N +
Sbjct: 192 VEEAIASYRKAIEVKPDCAGAYFSL------GFVLKGEG---EVEEAIVSYR-----NAI 237

Query: 474 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
           E+  +      NL  +L++  D   A   YR  +    ++ DAYL L  + +    ++ +
Sbjct: 238 EVKPDLAEAYLNLGYVLKEEGDVEEAIASYRQAIEVKPEFADAYLNLGNVLEEEGEIEEA 297

Query: 534 IELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
           I    +A++VN  +  A S LG L  +  D++ + E F+ A
Sbjct: 298 IASYRQAIEVNPDFVEAYSDLGKLFYEGGDYMSSIEFFQKA 338



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 69/319 (21%), Positives = 135/319 (42%), Gaps = 55/319 (17%)

Query: 32  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 91
           D++ E    LN LG+        ET+Q E  E  I+  +  ++  R      + W+  G 
Sbjct: 102 DLKAEYPEALNNLGICLK-----ETEQYEHSE--IVLKRAISRQPRF----AAAWLNLGN 150

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
            L  + +  +A  +++  +E   D   A L    V    G   +++  Y++A++V P C 
Sbjct: 151 TLKEQKKYSEAIVSYRNAIEVKPDFAEAYLNLGNVLKEEGAVEEAIASYRKAIEVKPDCA 210

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
           GA    +G      G++ +A  +++ A+++ P+  EA + L  +     E   + + +  
Sbjct: 211 GA-YFSLGFVLKGEGEVEEAIVSYRNAIEVKPDLAEAYLNLGYV---LKEEGDVEEAIAS 266

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
            ++A E+ P  A A                                     Y NL     
Sbjct: 267 YRQAIEVKPEFADA-------------------------------------YLNLGNVLE 289

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
            +G+ E+A   Y  ++ E+N   +F+  Y  LG++  + GD+ S++  F+K L +  ++ 
Sbjct: 290 EEGEIEEAIASYRQAI-EVNP--DFVEAYSDLGKLFYEGGDYMSSIEFFQKALSLDKNHL 346

Query: 332 ETLKALGHIYVQLGQIEKA 350
           ++   LG  + + GQI+ A
Sbjct: 347 KSAATLGFSFFRCGQIDAA 365


>gi|443328425|ref|ZP_21057023.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
 gi|442792010|gb|ELS01499.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
          Length = 1259

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 149/379 (39%), Gaps = 78/379 (20%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           KG +L   G++ +A S +   L    + V        +   +  +S S++ Y+RA+++ P
Sbjct: 172 KGNILQKIGKIAEAISCYHQALGVAPEFVEVYANLGGIYAQQQEWSKSVDAYQRAIEIKP 231

Query: 149 SCPGA-----------------------------------IRLGIGLCRYKLGQLGKARQ 173
           +  GA                                   I   IG+   +LGQ+ +A Q
Sbjct: 232 NFAGAYRNLAKVWYKQGQKEKAIACTYQALSLEPEKASPQIHHNIGVELLQLGQIEEASQ 291

Query: 174 AFQRALQLDPENVEALVALA--------------------VMDLQANEAAGIRK------ 207
            F+RA++LDP+ + A   LA                    V+  + +E            
Sbjct: 292 CFERAVKLDPQFIVAYQKLAETLEEQGKWQQAALSYRQALVLSPEPSEITAEPPATPSHQ 351

Query: 208 -----------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
                      G +K+ +A E Y          A H+   G  +  +Q  E A+ V    
Sbjct: 352 ETEVNLLSQGTGQDKIVQAIERYQLAIAKEPDSAEHYANLGSLYAQKQQWEEAITVYQQA 411

Query: 257 ----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
               P  +  Y NLAR       + +A  Y+  ++  +         ++ LG   L+ GD
Sbjct: 412 IKVDPNFAGVYRNLARVLERLEKFAEASKYWFKALS-LEPDRATAVEHFQLGNSLLQQGD 470

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             SA+  + + L++ PD       LG + +Q  QIE+A    R+A   + +DA+++  LG
Sbjct: 471 IPSAIACYRQTLQLQPDYSPAYHQLGELLLQQNQIEQASACFRQAIANNSQDAKSYQALG 530

Query: 373 ELLISS-DTGAALDAFKTA 390
            +L ++ D  +A+D ++ A
Sbjct: 531 RILAAAEDWQSAIDCYQKA 549



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 117/534 (21%), Positives = 226/534 (42%), Gaps = 61/534 (11%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y KA  I       ++  GQ L+ + +++ A + ++  L+  + N      Q  +   R 
Sbjct: 698  YAKALSISPQATDLYLAWGQALVNQNQIDSAIACYEQALKV-QPNFAEAHRQLAILLERL 756

Query: 132  RYSDSLEFYKRALQVHPS---CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
               ++ +    AL+  P        + LG      K  Q  KA + ++RAL++ P  VE 
Sbjct: 757  GNQEAADHRYLALENAPQETKVEAYLELGNTFLSQK--QPLKAEKCYRRALEISPHLVEP 814

Query: 189  LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
             + L  + LQ  +    R   E  Q+A   +P       +L    ++ GQ          
Sbjct: 815  YLCLGKLLLQEQKWPAAR---EVYQQAVAQHPSNIDLFYHLGETDYYQGQWGEAIASYRQ 871

Query: 249  ALAVTNHGPTKSHSYYNLARSYHSKGD--------YEKAGLYYMASVKEINKPHEFIFPY 300
             +A+            N  ++YH +GD         E    Y+ A    +N   +F++ Y
Sbjct: 872  VIALQP----------NFWQAYHHQGDALLNLEQWSEAVACYHQALA--LNP--DFVWSY 917

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE-------L 353
            + LG    KL  +  A+  ++K+ EI P+  +  +    I  QLG +   QE       +
Sbjct: 918  HNLGTALTKLEQWSDAIACYDKISEIAPEFWQENQGDFAIQSQLGDVLFQQERWPEAISV 977

Query: 354  LRKAAKIDPRDAQAFIDLGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVI 412
             ++A+++ P D     +LG+   S +    A+   +TA  L  K            +G I
Sbjct: 978  YQRASQLKPNDFWCHHNLGKAYYSLEQWEQAIAPLQTAARLNSKCAWS-----RYYLGEI 1032

Query: 413  HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE----- 467
            +  + +++ A  +++++L     +  +++K    +   + S +   D   ++R +     
Sbjct: 1033 YARQEKWDLAVAAYRESLAISTEIAEVENKLSHALHQQAKSNI--ADASKYYRSQVSQDP 1090

Query: 468  NDGNH----VELPWNKVTVLFNLARLL---EQIHDTVAASVLYRLILFKYQDYVDAYLRL 520
             D N     +E+  N  TV + LA  L   ++IH+   AS+ Y+  +    DY +A+++L
Sbjct: 1091 GDINSYRKLLEITQNDPTVYYGLANALAAADKIHE---ASIYYQKAIAIKPDYDEAFIQL 1147

Query: 521  AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
              I  ++N  Q +I+  ++AL+ N +    L+ LG   L+N  + +A   +R A
Sbjct: 1148 GEILLSQNRWQEAIDNYHQALEKNPQNEKILANLGAALLENGRFKEAMTVYRQA 1201



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 107/486 (22%), Positives = 182/486 (37%), Gaps = 81/486 (16%)

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
            L  +      +L +A       ++ ++L   +  +   P  P     G  L   K+G++
Sbjct: 125 TLSPEEKTAEIVLQKAINYLAENKWQEALTVCEEVIAATPIAPAYKTKGNIL--QKIGKI 182

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
            +A   + +AL + PE VE    L  +  Q  E +   K ++  QRA EI P        
Sbjct: 183 AEAISCYHQALGVAPEFVEVYANLGGIYAQQQEWS---KSVDAYQRAIEIKPN------- 232

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASV 287
                 F G                        +Y NLA+ ++ +G  EKA    Y A  
Sbjct: 233 ------FAG------------------------AYRNLAKVWYKQGQKEKAIACTYQALS 262

Query: 288 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 347
            E  K    I  ++ +G   L+LG    A   FE+ +++ P      + L     + G+ 
Sbjct: 263 LEPEKASPQI--HHNIGVELLQLGQIEEASQCFERAVKLDPQFIVAYQKLAETLEEQGKW 320

Query: 348 EKAQELLRKAAKIDPRDAQAFIDLGEL---------LISSDTGAALDAFKTARTLLKKAG 398
           ++A    R+A  + P  ++   +             L+S  TG         R  L  A 
Sbjct: 321 QQAALSYRQALVLSPEPSEITAEPPATPSHQETEVNLLSQGTGQDKIVQAIERYQLAIAK 380

Query: 399 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-----DGIWLTL---LDSKTKTYVIDA 450
           E    E   N+G ++ +K ++E A   ++ A+       G++  L   L+   K     A
Sbjct: 381 EPDSAEHYANLGSLYAQKQQWEEAITVYQQAIKVDPNFAGVYRNLARVLERLEKF----A 436

Query: 451 SASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLARLLEQIHDTVAASVLYRLILF 508
            AS   FK + L    E D         + T +  F L   L Q  D  +A   YR  L 
Sbjct: 437 EASKYWFKALSL----EPD---------RATAVEHFQLGNSLLQQGDIPSAIACYRQTLQ 483

Query: 509 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 568
              DY  AY +L  +   +N ++ +     +A+  N +   +   LG +    +DW  A 
Sbjct: 484 LQPDYSPAYHQLGELLLQQNQIEQASACFRQAIANNSQDAKSYQALGRILAAAEDWQSAI 543

Query: 569 ETFRAA 574
           + ++ A
Sbjct: 544 DCYQKA 549



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 126/296 (42%), Gaps = 28/296 (9%)

Query: 126  VEFNRGRYSDSLEFYKRALQVHPS---CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
            V F + R+ +++  Y+RA Q+ P+   C       +G   Y L Q  +A    Q A +L+
Sbjct: 964  VLFQQERWPEAISVYQRASQLKPNDFWC----HHNLGKAYYSLEQWEQAIAPLQTAARLN 1019

Query: 183  PENVEALVALAVMDLQANE----AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
             +   +   L  +  +  +     A  R+ +       E+    + AL+  A        
Sbjct: 1020 SKCAWSRYYLGEIYARQEKWDLAVAAYRESLAISTEIAEVENKLSHALHQQAKSNIADAS 1079

Query: 239  HFLVEQLTETA---------LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
             +   Q+++           L +T + PT    YY LA +  +     +A +YY  ++  
Sbjct: 1080 KYYRSQVSQDPGDINSYRKLLEITQNDPT---VYYGLANALAAADKIHEASIYYQKAIA- 1135

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
              KP ++   +  LG++ L    ++ A+ N+ + LE  P N + L  LG   ++ G+ ++
Sbjct: 1136 -IKP-DYDEAFIQLGEILLSQNRWQEAIDNYHQALEKNPQNEKILANLGAALLENGRFKE 1193

Query: 350  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 405
            A  + R+A  ++P +      +G++   +  G    A ++ R  ++     +P+E 
Sbjct: 1194 AMTVYRQAITLNPNNPMLHYRIGDVF--ARQGETDQASESYRRAVQLETTNIPLET 1247



 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            Y   QV    GD  S    + K+LEI  ++      L +      +I +A    +KA  I
Sbjct: 1081 YYRSQVSQDPGDINS----YRKLLEITQNDPTVYYGLANALAAADKIHEASIYYQKAIAI 1136

Query: 361  DPRDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
             P   +AFI LGE+L+S +    A+D +  A  L K    E   ++L N+G    E G F
Sbjct: 1137 KPDYDEAFIQLGEILLSQNRWQEAIDNYHQA--LEKNPQNE---KILANLGAALLENGRF 1191

Query: 420  ESAHQSFKDAL 430
            + A   ++ A+
Sbjct: 1192 KEAMTVYRQAI 1202


>gi|113476143|ref|YP_722204.1| hypothetical protein Tery_2526 [Trichodesmium erythraeum IMS101]
 gi|110167191|gb|ABG51731.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1154

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 12/343 (3%)

Query: 81  HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 140
           H PS +V  G     +  +E A  A++  LE D +          V    G+Y  +L  Y
Sbjct: 378 HSPS-YVILGNAFYQQNNLEAALHAYRQGLEIDPELAEVQGNIGSVYLQLGQYKQALFHY 436

Query: 141 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 200
           ++A+ + P   G I   IG     LG++ +A  A+ +AL++ P+ VEA     + +    
Sbjct: 437 QKAIDLKPGLAG-IYWNIGKLFQCLGKVDEAINAWSKALEIQPDIVEADFHFKLGNTLV- 494

Query: 201 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
           + + I   ++  +RA  +      A + LAN     G           AL +    P   
Sbjct: 495 KLSRINDAIKSYERAINLKQDYTEAYSNLANILGEKGDREAAVNYYNQALKIN---PELK 551

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
             +  LA +   KGDY++A ++Y  ++K   K ++    Y  LG      G    AL  +
Sbjct: 552 FLHEKLANNLLLKGDYDQAIIHYQEAIKYNPKSYD---AYANLGTALSNKGLLALALEKY 608

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
            K LE+ P   E    +GHI ++  ++E+A  L  KA ++ P+  +A   L +LL  S T
Sbjct: 609 YKALELKPSWAEVYSRIGHI-IKQEKMEEAIALFEKAIELKPQFVEAHQQLCDLL--SHT 665

Query: 381 GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 423
                A K A       GE  PI         +F+ G  E A+
Sbjct: 666 TKLAVARKAADNFCNSCGEIAPILSGTAFLFSYFQSGVSEVAN 708



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 166 GQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
           GQL  A  A+Q+AL + P+ VEA   LA V  +Q N  AGI    E    A +I P+ A 
Sbjct: 19  GQLYTAMIAYQKALAIKPDYVEAYKKLAEVYLMQGNFDAGISACKE----AVKIQPHFAS 74

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
           A   L N   F  Q+ L+E+   T     +  P  +  Y N+   Y+  G++  A   Y 
Sbjct: 75  AYLTLGN--IFQSQN-LLEKAINTYYEALSIEPNFAQVYANIGSVYYKLGEFNLAISNYQ 131

Query: 285 ASVKEINKPHEFIFPYYGLGQVQLKLGD-------FRSALTNFEKVLEIYPDNCETLKAL 337
            ++ EIN           L  VQL LG+       F  A+  ++K+L+I P + +    L
Sbjct: 132 KAL-EINS---------NLASVQLMLGNVFSLIGEFEQAIYCYQKLLQIKPKDAQAYFKL 181

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
             ++     IE A    +K+  I P   +AF+ L +L+    T   LD   T
Sbjct: 182 AEVFALYSNIELAINYYQKSLSIKPNYWEAFLKLSQLIKPEITDQELDKLFT 233



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G   +A+  ++K L I PD  E  K L  +Y+  G  +      ++A KI P  A A++ 
Sbjct: 19  GQLYTAMIAYQKALAIKPDYVEAYKKLAEVYLMQGNFDAGISACKEAVKIQPHFASAYLT 78

Query: 371 LGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           LG +  S +    A++ +  A ++     E    +V  NIG ++++ GEF  A  +++ A
Sbjct: 79  LGNIFQSQNLLEKAINTYYEALSI-----EPNFAQVYANIGSVYYKLGEFNLAISNYQKA 133

Query: 430 L 430
           L
Sbjct: 134 L 134



 Score = 43.1 bits (100), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 23/183 (12%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKA------GLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
           P  S SY  L  +++ + + E A      GL     + E+            +G V L+L
Sbjct: 376 PDHSPSYVILGNAFYQQNNLEAALHAYRQGLEIDPELAEVQG---------NIGSVYLQL 426

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA--F 368
           G ++ AL +++K +++ P        +G ++  LG++++A     KA +I P   +A   
Sbjct: 427 GQYKQALFHYQKAIDLKPGLAGIYWNIGKLFQCLGKVDEAINAWSKALEIQPDIVEADFH 486

Query: 369 IDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
             LG  L+  S    A+ +++ A  L     ++   E  +N+  I  EKG+ E+A   + 
Sbjct: 487 FKLGNTLVKLSRINDAIKSYERAINL-----KQDYTEAYSNLANILGEKGDREAAVNYYN 541

Query: 428 DAL 430
            AL
Sbjct: 542 QAL 544



 Score = 40.8 bits (94), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 56/266 (21%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y     + LK G+  SA+ + ++ L+I PD+  +   LG+ + Q   +E A    R+  +
Sbjct: 348 YINQANLALKQGNLASAIASCKQALKIQPDHSPSYVILGNAFYQQNNLEAALHAYRQGLE 407

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 417
           IDP  A+   ++G + +       L  +K A    +KA +  P    +  NIG +    G
Sbjct: 408 IDPELAEVQGNIGSVYLQ------LGQYKQALFHYQKAIDLKPGLAGIYWNIGKLFQCLG 461

Query: 418 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
           + + A  ++  AL           + +  +++A      FK                   
Sbjct: 462 KVDEAINAWSKAL-----------EIQPDIVEAD---FHFK------------------- 488

Query: 478 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
                L N    L +I+D + +   Y   +   QDY +AY  LA I   + + + ++   
Sbjct: 489 -----LGNTLVKLSRINDAIKS---YERAINLKQDYTEAYSNLANILGEKGDREAAVNYY 540

Query: 538 NEALKVNG-------KYPNALSMLGD 556
           N+ALK+N        K  N L + GD
Sbjct: 541 NQALKINPELKFLHEKLANNLLLKGD 566


>gi|445497194|ref|ZP_21464049.1| tetratricopeptide TPR_4 [Janthinobacterium sp. HH01]
 gi|444787189|gb|ELX08737.1| tetratricopeptide TPR_4 [Janthinobacterium sp. HH01]
          Length = 886

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 213/519 (41%), Gaps = 57/519 (10%)

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
           + D  +P   V +G  L+    V++  + F  VL        ALLGQA +         +
Sbjct: 112 KADPRQPQLQVLRGHALIGLDRVDEGRAVFAQVLAGHPGQPGALLGQARLALEAHNRETA 171

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
           L    +ALQ  P    A+RL   L R  LGQ   A  A+Q  L+L PE V+  + +A + 
Sbjct: 172 LRLINQALQGTPDDVDALRLQGDLLR-TLGQTAGALTAYQHVLKLGPELVQPHIDIASLY 230

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL-AVTNH 255
           +Q  +   + +   ++  A +I P   MA    A   F  G+    ++  +  L A  +H
Sbjct: 231 IQTGK---LNEARAELAVARKISPNSLMAAYTQALLDFREGKLAAAQERLQLVLRAAPDH 287

Query: 256 GPT----------------------------KSHSYYN--LARSYHSKGDYEKAGLYYMA 285
            P+                              H+Y +  LA    + G+ E+A    +A
Sbjct: 288 LPSNLLMGTVLRGLANYSQAEQHLRKFLEAHPGHAYASKQLAAMLMATGNPEQA----LA 343

Query: 286 SVKEINKPHEFIFPYYGL-GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
            V+ +   ++       L G++ ++L  +  + + FEK   + P       A+   ++ +
Sbjct: 344 IVEPLFDNNQQDLEMMSLAGEIHMRLRQYPRSASYFEKASALAPQTSMLHAAIAVSHIGM 403

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPI 403
           G   +A   L  A  +D + ++A + L    L + D   AL A K     L+    + P+
Sbjct: 404 GDTARAVAELELATSLDGKSSRAGVLLALTHLRNKDYAKALAAVKQ----LESQNGDNPM 459

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDALG-DGIWLTLLDSKTKTYVIDASASMLQFKDMQL 462
            V N  G +     E   A  +F+ AL  D ++L  LD+ T+  V+D      + +   L
Sbjct: 460 -VQNLKGGVLLMNRERAGARAAFERALALDPVYLPALDNLTQMDVVDKRPEPARLR---L 515

Query: 463 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                 DG + ++    +T L NLA  + Q H   A   L R +  ++ D  D  L LA 
Sbjct: 516 EAALAKDGKNADI----MTALANLA--ISQGHVAQAGGWLERAV-REHPDVADLNLMLAQ 568

Query: 523 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN 561
                  L  ++ L+ + L  N     ALS + +L+L+N
Sbjct: 569 FYVRNKELPKALVLMQKLLATNPANAEALSFMAELQLRN 607


>gi|229593982|ref|XP_001025913.2| TPR Domain containing protein [Tetrahymena thermophila]
 gi|225567182|gb|EAS05668.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 804

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 164/374 (43%), Gaps = 16/374 (4%)

Query: 58  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 117
           Q++K   + LA Q+ +   +I  +  + W   G          ++  +++  LE +    
Sbjct: 342 QKKKAHQWYLAYQFISICCQIQQNNETYWHYLGYTQNELNFFSESIKSYQKCLEINPKKD 401

Query: 118 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 177
              +  A     +G   ++++ YK+ L+++P    +    +G+     G L +A +A+Q+
Sbjct: 402 ICFMNLAIAYKEKGMIDEAIKSYKKCLEINPK-EDSCYYNLGIAYKDKGMLDEAIKAYQK 460

Query: 178 ALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 236
            L+++P+       L +    A +A G I + ++  Q+  EI P     L+ L   +   
Sbjct: 461 CLEINPKKEICFYNLGI----AYKAKGLIDEAIQSYQKCLEINPEKDTCLHNLGIAYKAK 516

Query: 237 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
           G   L+++  ++        P K   Y NL  +Y  KG   +A   Y   + EIN   + 
Sbjct: 517 G---LLDEAIKSYQKCIEINPKKDIYYMNLGLAYMEKGMLNEAIKQYQKCI-EINPKEDS 572

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
              Y+ LG      G    A+ +++K +EI P +   L  LG  Y   G +++A +  +K
Sbjct: 573 C--YFNLGIAYENKGMSGEAIKSYQKCVEINPQHDSCLYNLGIAYKAKGMLDEAIKSYQK 630

Query: 357 AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 416
             +I+P+      +LG  +     G   +A K+    L+   +     +  N+G+ +++K
Sbjct: 631 CLEINPKKDICLYNLG--IAYKAKGVYDEAIKSYYKCLEINPKHDNCHM--NLGLTYYDK 686

Query: 417 GEFESAHQSFKDAL 430
           G  + A +S++  L
Sbjct: 687 GMLDDAIKSYQKCL 700



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 159/373 (42%), Gaps = 32/373 (8%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y K   I+  E S +   G     KG +++A  A++  LE +              
Sbjct: 420 AIKSYKKCLEINPKEDSCYYNLGIAYKDKGMLDEAIKAYQKCLEINPKKEICFYNLGIAY 479

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKL-GQLGKARQAFQRALQLDPEN 185
             +G   ++++ Y++ L+++P     +  LGI    YK  G L +A +++Q+ ++++P+ 
Sbjct: 480 KAKGLIDEAIQSYQKCLEINPEKDTCLHNLGIA---YKAKGLLDEAIKSYQKCIEINPKK 536

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP---YCAMALNYLANHFFFTGQHFLV 242
               + L +  +   E   + + +++ Q+  EI P    C   L     +   +G+    
Sbjct: 537 DIYYMNLGLAYM---EKGMLNEAIKQYQKCIEINPKEDSCYFNLGIAYENKGMSGEA--- 590

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
               ++        P      YNL  +Y +KG  ++A   Y   + EIN   +     Y 
Sbjct: 591 ---IKSYQKCVEINPQHDSCLYNLGIAYKAKGMLDEAIKSYQKCL-EINPKKDICL--YN 644

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYP--DNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           LG      G +  A+ ++ K LEI P  DNC     LG  Y   G ++ A +  +K  KI
Sbjct: 645 LGIAYKAKGVYDEAIKSYYKCLEINPKHDNCHM--NLGLTYYDKGMLDDAIKSYQKCLKI 702

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGE 418
           +P+    +++LG   I+      L+    A    +K  E  P +     N+G+ +  KG 
Sbjct: 703 NPKHDICYMNLG---IAYKGKGMLE---EAIQFYQKCLEINPKKDSCYYNLGIAYKAKGM 756

Query: 419 FESAHQSFKDALG 431
            + A QS+K  L 
Sbjct: 757 MDKAIQSYKKCLS 769



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 138/307 (44%), Gaps = 16/307 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 125
           A Q Y K   I+  + +     G    AKG +++A  +++  +E +  +D     LG A 
Sbjct: 488 AIQSYQKCLEINPEKDTCLHNLGIAYKAKGLLDEAIKSYQKCIEINPKKDIYYMNLGLAY 547

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
           +E  +G  +++++ Y++ ++++P    +    +G+     G  G+A +++Q+ ++++P++
Sbjct: 548 ME--KGMLNEAIKQYQKCIEINPK-EDSCYFNLGIAYENKGMSGEAIKSYQKCVEINPQH 604

Query: 186 VEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
              L  L +    A +A G + + ++  Q+  EI P   + L  L   +   G +   ++
Sbjct: 605 DSCLYNLGI----AYKAKGMLDEAIKSYQKCLEINPKKDICLYNLGIAYKAKGVY---DE 657

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
             ++        P   + + NL  +Y+ KG  + A   Y   +K IN  H+    Y  LG
Sbjct: 658 AIKSYYKCLEINPKHDNCHMNLGLTYYDKGMLDDAIKSYQKCLK-INPKHDIC--YMNLG 714

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
                 G    A+  ++K LEI P        LG  Y   G ++KA +  +K   ++P  
Sbjct: 715 IAYKGKGMLEEAIQFYQKCLEINPKKDSCYYNLGIAYKAKGMMDKAIQSYKKCLSLNPNH 774

Query: 365 AQAFIDL 371
                +L
Sbjct: 775 KNCLKNL 781


>gi|428219241|ref|YP_007103706.1| hypothetical protein Pse7367_3029 [Pseudanabaena sp. PCC 7367]
 gi|427991023|gb|AFY71278.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           sp. PCC 7367]
          Length = 1639

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 21/341 (6%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  L  KG+++ A +A++  L  + D+  A      V  +  + + ++E Y+RA+++ P 
Sbjct: 57  GIALRQKGDLDAAQAAYQKALAIEPDSAKAHYSLGNVLMDAKQLAAAIESYQRAIELDPD 116

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK-- 207
              A    +G      GQL +A   +Q+A+  +P+  +A   L +       A G RK  
Sbjct: 117 LDSA-HFMLGYADQASGQLEQAIFHYQKAIDANPQRGDAYYNLGL-------AYGSRKQT 168

Query: 208 --GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
              +  +++A ++ P        LA  +   G     +   E A+A+    P  + + + 
Sbjct: 169 NLAIANLEQAVQLLPNDLKIRISLAKEYKKAGNFQAAQPHYEQAIAI---DPDHAETQFQ 225

Query: 266 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
           L   YH     + A   Y  ++  ++  +E    Y  LG +  + GD  +A+  +E+ LE
Sbjct: 226 LGYVYHQTNQLDAAIRQYQRAIA-LDPNYELT--YSNLGAILRRQGDLEAAIAMYEQALE 282

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 385
           + P N   L  LG+ ++   QIE A    R+  +I P    A  DL  LL  +D  AA  
Sbjct: 283 VNPRNTSALYNLGNAFLAKHQIEDAIACYRQVVEIKPDAIHAHQDLANLLFKTDIVAART 342

Query: 386 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
           A   A    +      PI  L N+   + +   ++ A + F
Sbjct: 343 A---AEDYHRGCAHIDPIATLANLISTNIKSDYYDVALKYF 380


>gi|166368546|ref|YP_001660819.1| hypothetical protein MAE_58050 [Microcystis aeruginosa NIES-843]
 gi|166090919|dbj|BAG05627.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843]
          Length = 741

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 172/435 (39%), Gaps = 45/435 (10%)

Query: 5   YFKQGK----VEQFRQ-ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQR 59
           +F QG     +EQ+++ I     + EI   Y +  Y R       GV    LG+ E    
Sbjct: 39  WFYQGTTFDYLEQYQEAIASYDRALEIKPDYHEAWYNR-------GVALGNLGRFEQ--- 88

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
                   A   Y++A  I   +P  W  +G  L   G  EQA +++   LE   D   A
Sbjct: 89  --------AIASYDRALEIKPDDPDAWNNRGNALYNLGRFEQAIASYDRALEIKPDYHEA 140

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
              +     N GR+  ++  Y RAL+  P  P A     G+    LG+  +A  ++ +AL
Sbjct: 141 WYNRGVALGNLGRFEQAIASYDRALEFKPDDPDAW-YNRGVALGNLGRFEQAIASYDKAL 199

Query: 180 QLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 237
           +  P+  EA     +A+ +L   E A     +    RA E  P    A NY        G
Sbjct: 200 EFKPDYHEAWYNRGIALGNLGRLEEA-----IASWDRALEFKPDDHDAWNYRGIALANLG 254

Query: 238 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
           +    E+   +        P    ++     +  + G +E+A   +  +++     H+  
Sbjct: 255 R---FEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHD-A 310

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           + Y G+      LG F  A+ +++K LE  PD  E     G     LG++E+A     +A
Sbjct: 311 WNYRGIALGN--LGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRA 368

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFE 415
            +I P   +A+ + G  L        L  F+ A     +A E  P   E   N GV    
Sbjct: 369 LEIKPDKHEAWYNRGVAL------GNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGN 422

Query: 416 KGEFESAHQSFKDAL 430
            G FE A  S+  AL
Sbjct: 423 LGRFEEAIASYDRAL 437



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 18/315 (5%)

Query: 65  FILATQYYNKA--SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           F  A   Y+KA   + D HE   W  +G  L   G +E+A +++   LE   D   A   
Sbjct: 324 FEEAIASYDKALEFKPDYHE--AWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYN 381

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +     N GR+ +++  Y RAL++ P    A     G+    LG+  +A  ++ RAL++ 
Sbjct: 382 RGVALGNLGRFEEAIASYDRALEIKPDKHEAW-YNRGVALGNLGRFEEAIASYDRALEIK 440

Query: 183 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           P+  EA     +A+ +L   E A     +    RA EI P    A     N     G   
Sbjct: 441 PDKHEAWYNRGVALGNLGRFEEA-----IASYDRALEIKPDKHEAW---YNRGVALGNLG 492

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            +E+   +        P    ++YN   +  + G +E+A   Y  +++     HE    +
Sbjct: 493 RLEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHE---AW 549

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y  G     LG    A+ ++++ LE  PD+ +     G     LG+ E+A     +A + 
Sbjct: 550 YNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEF 609

Query: 361 DPRDAQAFIDLGELL 375
            P D  A+ + G  L
Sbjct: 610 KPDDPDAWYNRGNAL 624



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 149/368 (40%), Gaps = 24/368 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   +++A      +   W  +G  L   G  E+A +++   LE   D+  A   +    
Sbjct: 225 AIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIAL 284

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            N GR+ +++  + RAL+  P    A    GI L    LG+  +A  ++ +AL+  P+  
Sbjct: 285 ANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALG--NLGRFEEAIASYDKALEFKPDYH 342

Query: 187 EALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
           EA     +A+ +L   E A     +    RA EI P    A     N     G     E+
Sbjct: 343 EAWYNRGIALKNLGRLEEA-----IASWDRALEIKPDKHEAW---YNRGVALGNLGRFEE 394

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
              +        P K  ++YN   +  + G +E+A   Y  +++     HE    +Y  G
Sbjct: 395 AIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHE---AWYNRG 451

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
                LG F  A+ ++++ LEI PD  E     G     LG++E+A     +A +  P D
Sbjct: 452 VALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALEFKPDD 511

Query: 365 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESA 422
             A+ + G  L        L  F+ A     +A E  P   E   N GV  +  G  E A
Sbjct: 512 PDAWYNRGVAL------GNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRLEEA 565

Query: 423 HQSFKDAL 430
             S+  AL
Sbjct: 566 IASYDRAL 573



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 127/309 (41%), Gaps = 12/309 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   +++A  I   +   W  +G  L   G  E+A +++   LE   D   A   +    
Sbjct: 361 AIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVAL 420

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            N GR+ +++  Y RAL++ P    A     G+    LG+  +A  ++ RAL++ P+  E
Sbjct: 421 GNLGRFEEAIASYDRALEIKPDKHEAW-YNRGVALGNLGRFEEAIASYDRALEIKPDKHE 479

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A     V          + + +    RA E  P    A     N     G     E+   
Sbjct: 480 AWYNRGVA---LGNLGRLEEAIASYDRALEFKPDDPDAW---YNRGVALGNLGRFEEAIA 533

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQV 306
           +        P K  ++YN   + ++ G  E+A   Y  +++ + + P  +      LG  
Sbjct: 534 SYDRALEIKPDKHEAWYNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGN- 592

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
              LG F  A+ ++++ LE  PD+ +     G+    LG++E+A     +A +  P   Q
Sbjct: 593 ---LGRFEQAIASYDRALEFKPDDPDAWYNRGNALDDLGRLEEAIASYDRALEFKPDYHQ 649

Query: 367 AFIDLGELL 375
           A+ + G  L
Sbjct: 650 AWYNRGNAL 658



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 18/308 (5%)

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 124
           F  A   Y++A  I   +   W  +G  L   G  E+A +++   LE   D   A   + 
Sbjct: 392 FEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRG 451

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
               N GR+ +++  Y RAL++ P    A     G+    LG+L +A  ++ RAL+  P+
Sbjct: 452 VALGNLGRFEEAIASYDRALEIKPDKHEAW-YNRGVALGNLGRLEEAIASYDRALEFKPD 510

Query: 185 NVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           + +A     +A+ +L   E A     +    RA EI P    A        +  G+   +
Sbjct: 511 DPDAWYNRGVALGNLGRFEEA-----IASYDRALEIKPDKHEAWYNRGVALYNLGR---L 562

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--Y 300
           E+   +        P    ++ N   +  + G +E+A   Y  +++   KP +   P  +
Sbjct: 563 EEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALE--FKPDD---PDAW 617

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y  G     LG    A+ ++++ LE  PD  +     G+    LG++E+A     +A KI
Sbjct: 618 YNRGNALDDLGRLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAIASYDQAIKI 677

Query: 361 DPRDAQAF 368
           +   A A+
Sbjct: 678 NSNSANAY 685



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 131/320 (40%), Gaps = 26/320 (8%)

Query: 117 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 176
           +P+L G     +   RY D+L+ + R + + P          G     L Q  +A  ++ 
Sbjct: 2   LPSLAGFTLKLYELKRYQDALKGFNRLVSLLPQWEDGW-FYQGTTFDYLEQYQEAIASYD 60

Query: 177 RALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           RAL++ P+  EA     +A+ +L   E A     +    RA EI P    A N   N  +
Sbjct: 61  RALEIKPDYHEAWYNRGVALGNLGRFEQA-----IASYDRALEIKPDDPDAWNNRGNALY 115

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
             G+        + AL +    P    ++YN   +  + G +E+A   Y  +++   KP 
Sbjct: 116 NLGRFEQAIASYDRALEIK---PDYHEAWYNRGVALGNLGRFEQAIASYDRALE--FKPD 170

Query: 295 EFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
           +   P  +Y  G     LG F  A+ +++K LE  PD  E     G     LG++E+A  
Sbjct: 171 D---PDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIA 227

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIG 410
              +A +  P D  A+   G  L      A L  F+ A     +A E  P   +  N  G
Sbjct: 228 SWDRALEFKPDDHDAWNYRGIAL------ANLGRFEEAIASWDRALEFKPDDHDAWNYRG 281

Query: 411 VIHFEKGEFESAHQSFKDAL 430
           +     G FE A  S+  AL
Sbjct: 282 IALANLGRFEEAIASWDRAL 301


>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
 gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
          Length = 4079

 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 151/356 (42%), Gaps = 35/356 (9%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   ++K   +D      +  KG  L A G++  A  AF  V++AD  +V   L +    
Sbjct: 3323 AITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMAL 3382

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            F+ GR++D++  YK+AL++ P+   A  L +G   Y L    +A  AF RAL L  E  E
Sbjct: 3383 FDLGRFNDAISSYKKALEIGPTNADAWYL-VGRSYYALNTYDEAIAAFDRALDLQGEFAE 3441

Query: 188  A-------LVALA-------------VMDLQANEAAGIRKGME--KMQRAFEIYPYCAMA 225
            A       L A+              V+  + +EA    KGM   K+QRA +       A
Sbjct: 3442 AWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAF-YHKGMALLKLQRAGDAVSAFDQA 3500

Query: 226  LNYLANH-FFFTGQHFLVEQLTETALAVTNHGPT------KSHSYYNLARSYHSKGDYEK 278
            L    N  + +TG+   +  L     A++ +          S +YY    SY S G Y+ 
Sbjct: 3501 LRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQD 3560

Query: 279  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
            A   + A++  +  P      +Y  G+    +  F  A+T+F+K L    D  E     G
Sbjct: 3561 AIRNFEATL--VQHP-SCARAFYAKGRALCGVSMFHEAITSFDKALSEQSDYPEAWLYRG 3617

Query: 339  HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 393
                 L + E+A +    A   +   A A ++ G  LI  + TG AL A +   T+
Sbjct: 3618 IAEANLEEFEEALDCYNHALAQNESYATALLNKGRALIHLERTGEALAAIEKVLTI 3673



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 19/311 (6%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            WV +G  L     +++A+ AF   +E D     A L +    F+  RY D+     +A 
Sbjct: 246 IWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMERYEDATYALDKAA 305

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           ++ P     I    G    +LG+  +A   F RAL  +PEN +AL +  V  +       
Sbjct: 306 ELSPQTT-KIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRGVSCIH------ 358

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKS 260
               + +   +  ++     +    A   +F G         + A++   H     P  +
Sbjct: 359 ----LSRYDESLSVFDRILASQGDHAGASYFRGVVLSRLGRQDEAISAFEHTLAIDPGCA 414

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
            + Y +  +  S G Y  A   Y  ++K   +P ++    Y  G    KLG+   AL  F
Sbjct: 415 SAAYQIGLASASLGRYSDAVAAYDRALK--IRP-DYPDAVYHKGFALAKLGNSEDALLEF 471

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
           ++ L   P N       G + V+ G++E+A E L K+  + P +AQ + D G  L+ ++ 
Sbjct: 472 DRALTENPGNAPAYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYYDKGSALLKAER 531

Query: 381 -GAALDAFKTA 390
            G AL+AF  A
Sbjct: 532 FGPALEAFDQA 542



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 125/330 (37%), Gaps = 50/330 (15%)

Query: 47   YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 106
            Y+  L  IE  + EK      A   + K  RID   P      G +L    + ++A   F
Sbjct: 1948 YHLGLAYIEQHRDEK------AIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEAIGLF 2001

Query: 107  KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
               LE  ++N   L  + C  F   +YS+++  + RAL +  +  GA+ +  G  R  LG
Sbjct: 2002 DRYLELGKENAGILYERGCAYFALQKYSEAIASFDRALALDANHIGAL-VKKGQSRANLG 2060

Query: 167  QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
            Q  +A   F R + LDPENV   +A  VM       A     +  + RA E         
Sbjct: 2061 QYEEAVTLFDRVITLDPENV---IAHFVMGTALARLARYEDAVVALDRALE--------- 2108

Query: 227  NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
                    + G +  +                K +S Y L R   S   + K      A 
Sbjct: 2109 --------YDGNNARIYA-------------CKGYSLYRLGRFKESAESFAK------AQ 2141

Query: 287  VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
             +E   P    F     G+  L  G +   +  F+K+L I P + +     G  Y  L  
Sbjct: 2142 KREPKDPFSLRFR----GKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSL 2197

Query: 347  IEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
             ++AQE   +A  ID   A A+   G +L 
Sbjct: 2198 HDEAQESFEQALTIDGECATAWYQKGLVLF 2227



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 134/347 (38%), Gaps = 76/347 (21%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G +L   G  ++A SAF+  L  D     A         + GRYSD++  Y RAL++ P
Sbjct: 386 RGVVLSRLGRQDEAISAFEHTLAIDPGCASAAYQIGLASASLGRYSDAVAAYDRALKIRP 445

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN--------------------VEA 188
             P A+    G    KLG    A   F RAL  +P N                    +EA
Sbjct: 446 DYPDAV-YHKGFALAKLGNSEDALLEFDRALTENPGNAPAYHQKGQLLVRTGRLEEALEA 504

Query: 189 L---VALAVMDLQA--NEAAGIRKG------MEKMQRAFEIYPYCAMALNYLANHFFFTG 237
           L   +AL   + Q   ++ + + K       +E   +A  IYP      NY+ N ++  G
Sbjct: 505 LNKSIALKPDNAQVYYDKGSALLKAERFGPALEAFDQAIGIYP------NYV-NAYYNKG 557

Query: 238 QHFLVEQLTETALAVTNHG----PTKSHSYYN-------LARSY---------------H 271
             F    + + AL   +H     PT + + Y+       L R                 +
Sbjct: 558 IAFSRTGMRKEALEAFDHAIAIDPTHTLALYHRGTMLSGLGRYADAAAAYDAVLALSPQN 617

Query: 272 SKGDYEKAGLYYM----------ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           +   YEK G+  M          A  + + +    I  +   G     LG F  A+  F+
Sbjct: 618 TSALYEK-GVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGTCNANLGKFPDAIAAFD 676

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
           +V+ + P N +     G   V  G+ E+A   L +A +  PRD +A+
Sbjct: 677 RVIALSPKNTQAFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAW 723



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 159/400 (39%), Gaps = 52/400 (13%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A Q +++    D      W  KG  LL+ G++  A  A    LE   DN      +A   
Sbjct: 2575 AIQCFDRVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVAL 2634

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPE-- 184
               GRY +S+  Y RAL ++P    A    G  L R  LG+  +A +AF+ A  +DPE  
Sbjct: 2635 AGLGRYEESIPSYDRALSLNPKYTSAYFDKGSALSR--LGRDRQAIEAFEMASAIDPEFA 2692

Query: 185  ---------------NVEALVAL-AVMDLQ-ANEAAGIRKG-----MEKMQRAFEIYPYC 222
                           N EA+ A  A + L  AN  A   KG     ++K   A  ++   
Sbjct: 2693 VAYLEKGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFD-- 2750

Query: 223  AMALNYLANHF---FFTGQHFLVEQLTETALAVTNHG----PTKSHSYY--NLARSYHSK 273
              AL   A H+   F  G      +  + A+   +H     P +   +Y   +A +   K
Sbjct: 2751 -AALRIDAKHYEAWFAKGYAQSRLRHYDDAVGAFDHALAIDPGRYAVWYEKGVALARAGK 2809

Query: 274  GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
             D E    +  A  ++  KP       Y  G+  L+LG+   A+T+F + L++     + 
Sbjct: 2810 ND-EAVAAFSEAIARDDKKPE----AQYEKGRALLELGEDEQAVTSFTRALDLDTSFGDA 2864

Query: 334  LKALGHIYVQLGQIEKAQELLRK--AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 391
               LG    ++G+   A     +  AA+ D  DA     +    +  D   A+ A++ AR
Sbjct: 2865 AYYLGLALERVGKFTDAITAYDRMVAARPDHSDAWYHRGIASERLGRDND-AVQAYEKAR 2923

Query: 392  TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 431
             +     E   + +L   G      G+FE A   F  ALG
Sbjct: 2924 QI-----EPHNLPLLFADGRAWARLGQFEDAIHLFDIALG 2958



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 165/401 (41%), Gaps = 56/401 (13%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   Y++A  ++   P     KG  L   G  E+A  ++   LE++     AL  +    
Sbjct: 1385 AIDAYDRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAAL 1444

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 186
                RY ++++ +  AL + P    A  L G+ L    L Q   +  A+ RAL+ DP + 
Sbjct: 1445 MKLERYREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQ--DSIYAYDRALECDPGSG 1502

Query: 187  EALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            E+ +  A+++ +L  +E A     +    +A EI P  A A  Y        G++    +
Sbjct: 1503 ESALNKAMSLHNLGQDEDA-----LAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVE 1557

Query: 245  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
              + ALA     P  +   Y   R++   G YE A   Y A+++   +P + I      G
Sbjct: 1558 ALDHALA---GDPKNARVNYQKGRAFDGLGQYENAISAYDAALQA--QP-DCIPARMHKG 1611

Query: 305  QVQLKLGDFRSALTNFEKVLEIYPDNCE-----------------TLKALGH-------- 339
            +  L +  FR A   F K+L  +PDN E                  ++A  H        
Sbjct: 1612 EALLFISRFRDATKEFGKILTEHPDNAEAWIKMARARFSLGDYTEVIEACDHALRFNADS 1671

Query: 340  ----IY-----VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKT 389
                +Y      +LG+ E+A E L +A +ID    QA   LG  L+  +  G A+ AF  
Sbjct: 1672 AEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLGAALLKLERYGDAIPAFD- 1730

Query: 390  ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             R L  K  +     +    GV    +G +  A  SF++AL
Sbjct: 1731 -RVLSLKPDQATAHHLR---GVALAAQGMYPEAISSFENAL 1767



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 157/413 (38%), Gaps = 70/413 (16%)

Query: 43  ALGVYYTYL------GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAK 96
           A+G+Y  Y+      G   ++   ++E    A + ++ A  ID         +G +L   
Sbjct: 542 AIGIYPNYVNAYYNKGIAFSRTGMRKE----ALEAFDHAIAIDPTHTLALYHRGTMLSGL 597

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G    A++A+  VL     N  AL  +        R+ D+ E + +A++  P    A  L
Sbjct: 598 GRYADAAAAYDAVLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAW-L 656

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
             G C   LG+   A  AF R + L P+N +A +   +  +   +     + +  + RA 
Sbjct: 657 AFGTCNANLGKFPDAIAAFDRVIALSPKNTQAFIHKGIALVTTGK---FEEAIAALNRAL 713

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           E  P    A       +++ G      Q  E A+                 RS+      
Sbjct: 714 EDAPRDERA-------WYYKGMSLAALQRFEEAV-----------------RSFER---- 745

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
                     V EIN+     F  +  G     LG    A+ ++++ LEI PDN  TL  
Sbjct: 746 ----------VLEINRRCSPAF--FQKGNALAHLGKQLEAIISYDQALEIDPDNPVTLYQ 793

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 396
            G    Q  + + A +   +   ++P +AQA   LG         A    F  A    ++
Sbjct: 794 KGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAY------AGRQRFDEAIVAFER 847

Query: 397 AGEEVPIEVLNN--IGVIHFEKGEFESAHQSFKDALGDGIWLTLLD-SKTKTY 446
           + E  P   L +  +GV   E   ++ A +SF +AL       LLD S   TY
Sbjct: 848 SLEIDPKNPLAHHYMGVSLVECDRYDDALRSFSEAL-------LLDASNASTY 893



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 123/304 (40%), Gaps = 18/304 (5%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   ++KA  I+      W+ KG  L   G+  +A+ A+   L+ D D     +      
Sbjct: 1045 AVTAFSKALDINAGIGGIWMHKGDALSTLGKTSEAAEAYAEALKLDPDQEEGWIKGGRAL 1104

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            F+ GRY D+++ +  A+ ++     A  L  G    K+ + G+A Q F+  L++DP N E
Sbjct: 1105 FDLGRYQDAIDAFDNAIALNQRSTVAF-LYKGFSLEKINRAGEALQVFEVLLEIDPHNSE 1163

Query: 188  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
            A      M L    +   +  +   + A +I        +  A  ++  G+  L     +
Sbjct: 1164 AHYH---MGLALAGSGRPKDALAAFESALKI-------RDTFAPAWYNKGKMLLDLGKYQ 1213

Query: 248  TALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
             ALA  +      P  +  +Y+   +    G + +A     A  + + K       YY  
Sbjct: 1214 EALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEA---IEAFERNLEKDTSNAPGYYFK 1270

Query: 304  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
            G    KLG ++ AL  F++ L   P+N       G     L + ++A     K   + PR
Sbjct: 1271 GIALSKLGRYQEALDAFDRALVYDPENALVYFQKGRALDGLNRFQEAVAAFEKTLALKPR 1330

Query: 364  DAQA 367
             ++A
Sbjct: 1331 YSEA 1334



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 125/315 (39%), Gaps = 20/315 (6%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   +++A R+  +    W GKG  L A    + A S +   +  DR +  A        
Sbjct: 3493 AVSAFDQALRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSY 3552

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 186
             + GRY D++  ++  L  HPSC  A    G  LC   +    +A  +F +AL    +  
Sbjct: 3553 LSLGRYQDAIRNFEATLVQHPSCARAFYAKGRALC--GVSMFHEAITSFDKALSEQSDYP 3610

Query: 187  EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            EA +   +   +AN        +E+ + A + Y +        A      G+  +  + T
Sbjct: 3611 EAWLYRGIA--EAN--------LEEFEEALDCYNHALAQNESYATALLNKGRALIHLERT 3660

Query: 247  ETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
              ALA    V    P  + ++Y   R++ ++   + A   +  ++  IN+  +F   +Y 
Sbjct: 3661 GEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALA-INR--QFAEAHYY 3717

Query: 303  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
             G    + G +  A+  F+  L I  D  E     G     L + ++A     +A   +P
Sbjct: 3718 KGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLERSKEALAAYDQALSANP 3777

Query: 363  RDAQAFIDLGELLIS 377
              A+A    G   I+
Sbjct: 3778 GYAEAIFQKGRTYIT 3792



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 82/387 (21%), Positives = 152/387 (39%), Gaps = 30/387 (7%)

Query: 50   YLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIV 109
            Y G    ++ + EE    A   ++ A RI    P  +  KG+ L      ++A +A+   
Sbjct: 3717 YKGTALARKGQYEE----AVAAFDAALRIKSDYPEAFYEKGRALFHLERSKEALAAYDQA 3772

Query: 110  LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
            L A+     A+  +            ++  + RAL+V+PSC  A         Y  G   
Sbjct: 3773 LSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQA-HYWKARTLYDEGSYD 3831

Query: 170  KARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
             A   + RA+ + P+  E      +A A +D         R+ ++   +A E+  + A A
Sbjct: 3832 AAITEYDRAIAIKPDRPELYRDRGLAYAAID-------QYREAIKSYDKALELDTHGADA 3884

Query: 226  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
             ++  +     G +    +  E A+      P  + S++      +  G + +A   Y  
Sbjct: 3885 FSHKGSSLAELGMYRDALEAFEKAI---EKDPELATSWFGKGNVLYDLGKFTEACAAYDE 3941

Query: 286  SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
             ++   +  E    +   G     L D ++A+ ++++ L I P         G  +  LG
Sbjct: 3942 GLR---RDPENAVGWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALG 3998

Query: 346  QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI-- 403
            Q E+A+   R    + P    A+I  G  L   +       ++ A T  K+A E  P   
Sbjct: 3999 QFEEAEASFRAMISLQPDFVDAWIHQGRALQEQEK------YQEALTSFKRALEIDPSRK 4052

Query: 404  EVLNNIGVIHFEKGEFESAHQSFKDAL 430
            E+ N++G    + G+ E A   ++ AL
Sbjct: 4053 EIWNDVGSTLDKLGKHEEAQICYEKAL 4079



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 133/651 (20%), Positives = 244/651 (37%), Gaps = 87/651 (13%)

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
             W  KG  L A    E+A  +F+ VLE +R   PA   +     + G+  +++  Y +AL
Sbjct: 722  AWYYKGMSLAALQRFEEAVRSFERVLEINRRCSPAFFQKGNALAHLGKQLEAIISYDQAL 781

Query: 145  QVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 203
            ++ P  P  + + GI L + +  +   A + F+R L L+PEN +AL  L +        A
Sbjct: 782  EIDPDNPVTLYQKGIALAQRE--RYDDAIKTFERLLTLEPENAQALYYLGIA------YA 833

Query: 204  GIRK---GMEKMQRAFEIYPYCAMALNYL---------------------------ANHF 233
            G ++    +   +R+ EI P   +A +Y+                           A+ +
Sbjct: 834  GRQRFDEAIVAFERSLEIDPKNPLAHHYMGVSLVECDRYDDALRSFSEALLLDASNASTY 893

Query: 234  FFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
            ++ G  FL     E A+A  N       + S ++  L  S    G +++A      S+  
Sbjct: 894  YYQGIAFLQSHQYEEAIAALNTAIRMDTSLSDAFTYLGISLARLGRHDEAVAALNRSLAA 953

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
                 E +      G+  + L  +  A+  F+++L + P+        G    +L + + 
Sbjct: 954  NPSQMEALV---CRGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQD 1010

Query: 350  AQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
            A  +  +  +I+P +A A+   G LL     T  A+ AF  A            +++   
Sbjct: 1011 ALAVYTRVLEINPGNADAWARKGVLLQDLGRTAEAVTAFSKA------------LDINAG 1058

Query: 409  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
            IG I   KG+  S      +A         LD   +   I    ++      Q     + 
Sbjct: 1059 IGGIWMHKGDALSTLGKTSEAAEAYAEALKLDPDQEEGWIKGGRALFDLGRYQ--DAIDA 1116

Query: 469  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
              N + L              LE+I+    A  ++ ++L       +A+  +        
Sbjct: 1117 FDNAIALNQRSTVAFLYKGFSLEKINRAGEALQVFEVLLEIDPHNSEAHYHMGLALAGSG 1176

Query: 529  NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLS 588
              + ++     ALK+   +  A    G + L   D  K +E   A   A + + +Y  + 
Sbjct: 1177 RPKDALAAFESALKIRDTFAPAWYNKGKMLL---DLGKYQEALAAFDQALEREPAYTEVF 1233

Query: 589  LGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV 648
               ++   AL    R P+        A E + R + + TSN       G+ L++ G++  
Sbjct: 1234 ---YSRGVALSKLGRFPE--------AIEAFERNLEKDTSNAPGYYFKGIALSKLGRYQE 1282

Query: 649  SKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 699
            + D F +          V  P+     A VYF +G     +  +Q  +  F
Sbjct: 1283 ALDAFDR--------ALVYDPEN----ALVYFQKGRALDGLNRFQEAVAAF 1321



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
           R +  AL+ Q    ++ GR+ +++  + RAL + P  P A     G+  Y LG+   A  
Sbjct: 3   RSDAEALMRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFK-GIALYDLGRYEDALD 61

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC--AMALNY-LA 230
           ++  AL LDP ++ +           N+AA     + ++ R  E    C   +AL +  A
Sbjct: 62  SYDHALALDPSDINSWY---------NKAA----TLAQIGRNKEALDACDRLIALRFDNA 108

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
             +   G           A++  +H     PT +  YYN   +    G +++A   Y  +
Sbjct: 109 EAWILKGISLYELGRFRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKA 168

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
           V  +    E+   YY +G    ++G +  AL  FEK  ++ P +
Sbjct: 169 VGIVP---EYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSD 209



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 157/700 (22%), Positives = 261/700 (37%), Gaps = 110/700 (15%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD--NVPALLGQAC 125
            A   +++A   D  +P     KG+ LL  GE EQA ++F   L+ D    +    LG A 
Sbjct: 2813 AVAAFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDTSFGDAAYYLGLAL 2872

Query: 126  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
                 G+++D++  Y R +   P    A     G+   +LG+   A QA+++A Q++P N
Sbjct: 2873 ERV--GKFTDAITAYDRMVAARPDHSDAW-YHRGIASERLGRDNDAVQAYEKARQIEPHN 2929

Query: 186  VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
            +  L A        +  A  R G       FE            A H F           
Sbjct: 2930 LPLLFA--------DGRAWARLGQ------FED-----------AIHLF----------- 2953

Query: 246  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
             + AL      P      +  A++  + G +++A   +  +  ++   +E   P Y  G 
Sbjct: 2954 -DIALGKE---PGNGEILFEKAKALAALGRHDEAQEIFRLAFTQLTDNYE---PAYLRGL 3006

Query: 306  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
              L L  +  A   F+  L + PD  E  +  G   +  G  E A      A  + P D 
Sbjct: 3007 SLLALERYEDADMAFDAALSLSPDLPEIWEKKGGALMHAGNYEGAVAAFDHAISLLPDDP 3066

Query: 366  QAFIDLG----------ELLISSDTGAALD------AFKTARTLLKKAGEEVPIEVLNNI 409
             A+++ G          E + S D   AL+      +F+  R L   A  E  +E L+  
Sbjct: 3067 GAYLERGRALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAVEALDTT 3126

Query: 410  --------GVIHFEKGE------FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 455
                    G ++F          +  A +SF+  L     +   ++    Y      + L
Sbjct: 3127 LSSDPRHPGALYFRAASLAALERYAEAAESFERLL-----VYTPENADAWYEQGCVLARL 3181

Query: 456  QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL-FKYQDYV 514
            +  D +    F++  N V         LF  AR L+ +     A   Y   L  K  D  
Sbjct: 3182 RHYD-EAIAAFDHVLNLVP---EHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAK 3237

Query: 515  DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
              Y R  ++A+     + +++  + AL+++  + +AL   G   L    + +A +TF   
Sbjct: 3238 THYYRGVSLAE-NGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTF--- 3293

Query: 575  SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAAN 634
             D T          L   NY A +   K     E    ++A   + + I     N  A  
Sbjct: 3294 -DKT---------LLIEKNY-AGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDAFY 3342

Query: 635  GAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQN 694
              GV LA  G+   + + F  V +A  GSV       W++     F  G F  A+  Y+ 
Sbjct: 3343 HKGVSLAATGKLTNAMEAFDHVIQADPGSV-----QGWLHRGMALFDLGRFNDAISSYKK 3397

Query: 695  CLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHL 734
             L     N DA  L  + R++Y    + +   +  RA+ L
Sbjct: 3398 ALEIGPTNADAWYL--VGRSYYALNTYDEAIAAFDRALDL 3435



 Score = 47.4 bits (111), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 96/420 (22%), Positives = 164/420 (39%), Gaps = 64/420 (15%)

Query: 48   YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
            + Y G  E    E EE    A   YN A   +    +  + KG+ L+      +A +A +
Sbjct: 3613 WLYRGIAEANLEEFEE----ALDCYNHALAQNESYATALLNKGRALIHLERTGEALAAIE 3668

Query: 108  IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLG 166
             VL    ++  A   +     NR +  D+++ + RAL ++     A    G  L R   G
Sbjct: 3669 KVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALAINRQFAEAHYYKGTALARK--G 3726

Query: 167  QLGKARQAFQRALQLDPENVEALV--------------ALAVMD--LQANEA---AGIRK 207
            Q  +A  AF  AL++  +  EA                ALA  D  L AN     A  +K
Sbjct: 3727 QYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLERSKEALAAYDQALSANPGYAEAIFQK 3786

Query: 208  G------------MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
            G            +    RA E+ P C  A  + A   +  G +       + A+A+   
Sbjct: 3787 GRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTLYDEGSYDAAITEYDRAIAIK-- 3844

Query: 256  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
             P +   Y +   +Y +   Y +A   Y  ++ E++      F + G    +  LG +R 
Sbjct: 3845 -PDRPELYRDRGLAYAAIDQYREAIKSYDKAL-ELDTHGADAFSHKGSSLAE--LGMYRD 3900

Query: 316  ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            AL  FEK +E  P+   +    G++   LG+  +A     +  + DP +A  +   G  L
Sbjct: 3901 ALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEGLRRDPENAVGWTRRGMSL 3960

Query: 376  IS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK-------GEFESAHQSFK 427
               +D  AA++++  A            + +  +  + +F +       G+FE A  SF+
Sbjct: 3961 AGLNDHKAAIESYDRA------------LAIDPSFSIAYFTRGSAFEALGQFEEAEASFR 4008



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 127/356 (35%), Gaps = 72/356 (20%)

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
             W+   +   + G+  +   A    L  + D+  ALL +   ++  GRY +++E   RA 
Sbjct: 1640 AWIKMARARFSLGDYTEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAE 1699

Query: 145  QVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQA 199
            Q+      A+  LG  L   KL + G A  AF R L L P+   A     VALA   +  
Sbjct: 1700 QIDSHLEQAVYHLGAALL--KLERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYP 1757

Query: 200  NEAAGIRKGMEKMQRAFEIYPYCAMALNYL--------------------ANHFFFTGQH 239
               +     +    R+ E     A+AL+ L                    A  +++ G  
Sbjct: 1758 EAISSFENALRYDPRSAESALNKAIALHSLGRDEESILASDIALGIQPDFAEAWYYKG-- 1815

Query: 240  FLVEQLTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
              +E L   A AV           T +H+++ +         YE+A   +   +  ++  
Sbjct: 1816 VALETLKRYADAVPAFSRSLELDSTTTHAWFEMGLCLVELQRYEEAAGAFDHVLGLVS-- 1873

Query: 294  HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI------------- 340
             ++   Y+  G+    LG +  A+  F+  L I P +   L A GH              
Sbjct: 1874 -DYPPAYFHKGRALALLGKYEEAVVAFDSALAITPGDAIVLSAKGHALESLKKYREAAAA 1932

Query: 341  ---------------------YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
                                 Y++  + EKA     K  +IDP +  A    G +L
Sbjct: 1933 FEEATSVNPAAADDYYHLGLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVL 1988



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 61/310 (19%), Positives = 122/310 (39%), Gaps = 38/310 (12%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y+ A  +D  + ++W  K   L   G  ++A  A   ++    DN  A + +    +  G
Sbjct: 63  YDHALALDPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWILKGISLYELG 122

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           R+ D++  Y  AL + P+    +    G+    LG+  +A  A+ +A+ + PE  +A   
Sbjct: 123 RFRDAISAYDHALAIDPTY-AKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEYAKAYYN 181

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
              M +   E     + +   ++A ++ P       Y A   F   +     Q  E A  
Sbjct: 182 ---MGISLYEIGRYDEALGAFEKAHDLDPSDPWVWYYRA---FILAKQERYAQAAEAAGV 235

Query: 252 VTNHGP-------TKSHSYYNLARSYHSKGDYEK----------AGLYYMASVKEINKPH 294
             +  P        +  S Y L R   +   +++          A LY   S+ ++ +  
Sbjct: 236 FLSFEPEHADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMERYE 295

Query: 295 EFIFP--------------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +  +               YY  G+   +LG +R A+ +F++ L   P+N + L + G  
Sbjct: 296 DATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRGVS 355

Query: 341 YVQLGQIEKA 350
            + L + +++
Sbjct: 356 CIHLSRYDES 365



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 129/339 (38%), Gaps = 74/339 (21%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A + +  AS ID      ++ KG  L    + ++A +AF   L  D  NVPAL  +    
Sbjct: 2677 AIEAFEMASAIDPEFAVAYLEKGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLAL 2736

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP---- 183
             N  +++D++  +  AL++      A     G  + +L     A  AF  AL +DP    
Sbjct: 2737 ANLKKFADAITVFDAALRIDAKHYEAW-FAKGYAQSRLRHYDDAVGAFDHALAIDPGRYA 2795

Query: 184  -------------ENVEALVAL-------------------AVMDLQANEAAGIRKGMEK 211
                         +N EA+ A                    A+++L  +E A     +  
Sbjct: 2796 VWYEKGVALARAGKNDEAVAAFSEAIARDDKKPEAQYEKGRALLELGEDEQA-----VTS 2850

Query: 212  MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSYYN 265
              RA ++      A  YL            +E++ +   A+T +       P  S ++Y+
Sbjct: 2851 FTRALDLDTSFGDAAYYLG---------LALERVGKFTDAITAYDRMVAARPDHSDAWYH 2901

Query: 266  -------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
                   L R   +   YEKA        ++I +PH      +  G+   +LG F  A+ 
Sbjct: 2902 RGIASERLGRDNDAVQAYEKA--------RQI-EPHNLPL-LFADGRAWARLGQFEDAIH 2951

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             F+  L   P N E L         LG+ ++AQE+ R A
Sbjct: 2952 LFDIALGKEPGNGEILFEKAKALAALGRHDEAQEIFRLA 2990



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 160/398 (40%), Gaps = 58/398 (14%)

Query: 36   ERIAILN-------ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVG 88
            E IA LN       +L   +TYLG    +    +E    A    N++   +  +    V 
Sbjct: 908  EAIAALNTAIRMDTSLSDAFTYLGISLARLGRHDE----AVAALNRSLAANPSQMEALVC 963

Query: 89   KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
            +G+ L+       A   F  +L  + + + A + +        +  D+L  Y R L+++P
Sbjct: 964  RGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVLEINP 1023

Query: 149  SCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDP-------ENVEALVALA------- 193
                A  R G+ L    LG+  +A  AF +AL ++           +AL  L        
Sbjct: 1024 GNADAWARKGVLLQ--DLGRTAEAVTAFSKALDINAGIGGIWMHKGDALSTLGKTSEAAE 1081

Query: 194  ----VMDLQANEAAGIRKG------MEKMQRAFEIYPYCAMALNYLAN-HFFFTGQHFLV 242
                 + L  ++  G  KG      + + Q A + +   A+ALN  +   F + G  F +
Sbjct: 1082 AYAEALKLDPDQEEGWIKGGRALFDLGRYQDAIDAFD-NAIALNQRSTVAFLYKG--FSL 1138

Query: 243  EQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
            E++     A+          P  S ++Y++  +    G  + A    +A+ +   K  + 
Sbjct: 1139 EKINRAGEALQVFEVLLEIDPHNSEAHYHMGLALAGSGRPKDA----LAAFESALKIRDT 1194

Query: 297  IFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
              P +Y  G++ L LG ++ AL  F++ LE  P   E   + G    +LG+  +A E   
Sbjct: 1195 FAPAWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEAIEAFE 1254

Query: 356  KAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTA 390
            +  + D  +A  +   G  L  S  G    ALDAF  A
Sbjct: 1255 RNLEKDTSNAPGYYFKGIAL--SKLGRYQEALDAFDRA 1290



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 94/428 (21%), Positives = 152/428 (35%), Gaps = 81/428 (18%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   Y+ A  ++   P     KG  LL       A  AF   ++    +  A   +    
Sbjct: 2371 AIHAYDLALSLESAYPEGSFKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLAL 2430

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            F  G+   ++  +  AL+  PS   A+    GL    L +   A  AF + L+  P+N E
Sbjct: 2431 FALGKNEKAIRSFTHALEHDPSLSDAL-FHTGLAYAALSRYSPALSAFDKLLESGPQNAE 2489

Query: 188  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL---NYLANHFFFTGQHFLVEQ 244
            AL     M             + K+ R  E       +L   N +A+ +   G   L ++
Sbjct: 2490 ALFQKGRM-------------LAKLGRPDEALAVLETSLGLENNIADVWLLKGSVLLEQE 2536

Query: 245  LTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
              E AL V +      P  + ++Y   +++     Y +A   +   V       +    +
Sbjct: 2537 RLEDALEVFDRALALTPENNAAWYRKGKAFSGLHRYPEAIQCFDRVVTSDTGCAQ---AW 2593

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE-------TLKALGH-------------- 339
            +  G   L  GD R+A+    K LE+ PDN          L  LG               
Sbjct: 2594 FRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGLGRYEESIPSYDRALSL 2653

Query: 340  -------------IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG----------ELLI 376
                            +LG+  +A E    A+ IDP  A A+++ G          E + 
Sbjct: 2654 NPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDPEFAVAYLEKGLALARLSKNKEAVA 2713

Query: 377  SSDTGAALDA------FKTARTL--LKKAGEEVPI-EVLNNIGVIHFE----KGEFESAH 423
            + D   ALD       F     L  LKK  + + + +    I   H+E    KG  +S  
Sbjct: 2714 AFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRIDAKHYEAWFAKGYAQSRL 2773

Query: 424  QSFKDALG 431
            + + DA+G
Sbjct: 2774 RHYDDAVG 2781



 Score = 43.1 bits (100), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 105/282 (37%), Gaps = 52/282 (18%)

Query: 89   KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
            KG  L   G    A   F   +  +  N  A   +    F+ G Y+++++ Y RAL+V  
Sbjct: 1338 KGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRALEVES 1397

Query: 149  SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
            S P A     GL  Y+LG+  +A  ++ +AL+ +P    AL          +  A + K 
Sbjct: 1398 SYPEA-HYHKGLALYELGRYEEALLSYDQALESNPHLDYALF---------HRGAALMK- 1446

Query: 209  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYY 264
            +E+ + A + +    + L   A      G     + L + ++   +      P    S  
Sbjct: 1447 LERYREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDPGSGESAL 1506

Query: 265  NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
            N A S H+                                     LG    AL    K +
Sbjct: 1507 NKAMSLHN-------------------------------------LGQDEDALAAAVKAI 1529

Query: 325  EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
            EI PD  E  +  G I   LG+ +++ E L  A   DP++A+
Sbjct: 1530 EIQPDFAEAWRYRGLILSNLGRYQESVEALDHALAGDPKNAR 1571


>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 1279

 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 109/516 (21%), Positives = 201/516 (38%), Gaps = 56/516 (10%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y +A +ID +    +  +G +    G  + A   +   L  D +             N  
Sbjct: 432 YTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYAEVYHNWGTTRINLE 491

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               +++ Y +AL ++P+   A   G G+ R+ LG    A   + +AL ++P   +A   
Sbjct: 492 DNQGAIDDYTQALNINPNYAQAY-YGRGIARFNLGDKQGAIDDYTQALNINPNYAQAYYN 550

Query: 192 LAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
             +    A  + G ++G ++   +A  I P      NY   ++ +     +  +L +   
Sbjct: 551 RGI----ARTSLGDKQGAVDDYTQALNINP------NYDQAYYAWG---MVCSELGDKPG 597

Query: 251 AVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
           AV N+       P    +Y     +    GD + A   Y    + +N   ++ + Y   G
Sbjct: 598 AVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDY---TQALNLNPDYAYIYNNRG 654

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
            V+  + D++ A+ ++ + L I PD  +     G  Y  LG  + A +   ++ +I P  
Sbjct: 655 VVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIKPNC 714

Query: 365 AQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 423
           A  ++  G  L    D+  A++ F  A  +     +    +  NN G++ +E G+++ A 
Sbjct: 715 ADTYVGRGTALYKLGDSQGAINDFHHALDI-----DASYADAYNNRGIVRYELGDYQGAI 769

Query: 424 QSFKDALGDGIWLTLLDSKTKTYVI-----DASASMLQFKDMQLFHRFENDGNHVELPWN 478
             F  AL   I      +     ++     D   +M  F      H    + N+ +   N
Sbjct: 770 NDFNHALN--INPNYAQAYNNRGIVRYELRDNQGAMEDFN-----HAVNINSNYAQAYNN 822

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
           +  V   L      I D   A      I+  Y +Y ++Y+          N Q +IE  N
Sbjct: 823 RGIVRICLGERQLAIEDFSQA------IIIAY-NYTESYINRGYARYELGNRQKAIEDFN 875

Query: 539 EALKVNGKYPNALSM-------LGDLELKNDDWVKA 567
           +AL +N  Y  A +        LGD E   DD+ +A
Sbjct: 876 QALNINPNYAQAYNNRGVAYTDLGDREWAKDDFSQA 911



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 97/439 (22%), Positives = 170/439 (38%), Gaps = 73/439 (16%)

Query: 30   YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGK 89
            YAD  Y R       G+ Y  LG  ++           A   Y ++  I  +   T+VG+
Sbjct: 680  YADAYYNR-------GIAYYDLGNYQS-----------AIDDYTRSIEIKPNCADTYVGR 721

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            G  L   G+ + A + F   L+ D     A   +  V +  G Y  ++  +  AL ++P+
Sbjct: 722  GTALYKLGDSQGAINDFHHALDIDASYADAYNNRGIVRYELGDYQGAINDFNHALNINPN 781

Query: 150  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
               A     G+ RY+L     A + F  A+ ++    +A     ++ +   E    +  +
Sbjct: 782  YAQAYN-NRGIVRYELRDNQGAMEDFNHAVNINSNYAQAYNNRGIVRICLGER---QLAI 837

Query: 210  EKMQRAFEI-YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
            E   +A  I Y Y    +N     +    +   +E   +      N  P  + +Y N   
Sbjct: 838  EDFSQAIIIAYNYTESYINRGYARYELGNRQKAIEDFNQ----ALNINPNYAQAYNNRGV 893

Query: 269  SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ-----VQLKLGDFRSALTNFEKV 323
            +Y   GD E A   +  +++        I PYY         V  +LGD + A+ +F + 
Sbjct: 894  AYTDLGDREWAKDDFSQAIQ--------INPYYAEAYNNRAIVCYELGDHQGAIEDFNQA 945

Query: 324  LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 383
            L I  +  E     G+I  +LG  + A E   +A  +        +DLGE L        
Sbjct: 946  LNINSNYVEAYNKRGNIRYELGDRQGAIEDFNRALNL------GSLDLGENL-------- 991

Query: 384  LDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEK------GEFESAHQS---FKDALGD 432
                       ++ G  + I++ N  N+ ++ FE       GE      S   F + LGD
Sbjct: 992  --------KFWERGGLTLTIKLRNYLNLKILSFEVVSKKNFGEIIKTDASVIYFVEDLGD 1043

Query: 433  GIWLTLLDSKTKTYVIDAS 451
             I L +++    T+ I+++
Sbjct: 1044 DITLEMVEIPGGTFTINSA 1062



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 137/660 (20%), Positives = 256/660 (38%), Gaps = 83/660 (12%)

Query: 7   KQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 66
           KQG ++ F Q++       I+ ++AD               Y   G +    R  +E   
Sbjct: 323 KQGAIDDFNQVIT------INPHFADG--------------YAARGLVYCDLRNYQE--- 359

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
            A   +N+  RI+ +    +  +G      G+ + A   +   L  +     A   +  +
Sbjct: 360 -AINDFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTHSLNLNPKFASAYYNRGII 418

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
             + G    +++ Y +A+++ P+   A     G  R  LG    A   + +AL++D    
Sbjct: 419 RSDLGSQKAAMDDYTQAIKIDPNYAQAYN-NRGAIRTYLGNYQGAIDDYIQALRVDSNYA 477

Query: 187 EALVALAV--MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG-QHFLVE 243
           E         ++L+ N+ A     ++   +A  I P  A A        F  G +   ++
Sbjct: 478 EVYHNWGTTRINLEDNQGA-----IDDYTQALNINPNYAQAYYGRGIARFNLGDKQGAID 532

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
             T+      N  P  + +YYN   +  S GD + A   Y    + +N    +   YY  
Sbjct: 533 DYTQ----ALNINPNYAQAYYNRGIARTSLGDKQGAVDDY---TQALNINPNYDQAYYAW 585

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G V  +LGD   A+ N+ + L I PD+ ET  A G    +LG  + A +   +A  ++P 
Sbjct: 586 GMVCSELGDKPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNPD 645

Query: 364 DAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
            A  + + G  ++ SD      A+D +  A  +          +   N G+ +++ G ++
Sbjct: 646 YAYIYNNRG--VVRSDIADYQRAIDDYTQALNISPDYA-----DAYYNRGIAYYDLGNYQ 698

Query: 421 SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ-----LFHRFENDGNHVEL 475
           SA   +  +      + +  +   TYV   +A + +  D Q       H  + D ++ + 
Sbjct: 699 SAIDDYTRS------IEIKPNCADTYVGRGTA-LYKLGDSQGAINDFHHALDIDASYADA 751

Query: 476 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
             N+  V + L      I+D       +   L    +Y  AY     +     + Q ++E
Sbjct: 752 YNNRGIVRYELGDYQGAIND-------FNHALNINPNYAQAYNNRGIVRYELRDNQGAME 804

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF 595
             N A+ +N  Y  A +  G + +   +   A E F  A              +  +NY 
Sbjct: 805 DFNHAVNINSNYAQAYNNRGIVRICLGERQLAIEDFSQA-------------IIIAYNYT 851

Query: 596 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 655
            +  N   A + E  + +KA E + + +  + +   A N  GV   + G  + +KD F+Q
Sbjct: 852 ESYINRGYA-RYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDREWAKDDFSQ 910



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 99/463 (21%), Positives = 176/463 (38%), Gaps = 64/463 (13%)

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKP----HEFIFPYYGLGQVQLKLGDFRSALTNF 320
           NLA + +S+G   +   Y   ++++ N+       F   Y   G  +  LGD + A+ +F
Sbjct: 271 NLALAAYSRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAIDDF 330

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 379
            +V+ I P   +   A G +Y  L   ++A     +  +I+P  AQA+ + G       D
Sbjct: 331 NQVITINPHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGD 390

Query: 380 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-DGIWLTL 438
              A+D +  +  L  K           N G+I  + G  ++A   +  A+  D  +   
Sbjct: 391 KQGAIDDYTHSLNLNPKFA-----SAYYNRGIIRSDLGSQKAAMDDYTQAIKIDPNYAQA 445

Query: 439 LDSK--TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 496
            +++   +TY+ +   ++  +           D N+ E+  N  T   NL        D 
Sbjct: 446 YNNRGAIRTYLGNYQGAIDDY-----IQALRVDSNYAEVYHNWGTTRINL-------EDN 493

Query: 497 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL---QLSIELVNEALKVNGKYPNAL-- 551
             A   Y   L    +Y  AY        AR NL   Q +I+   +AL +N  Y  A   
Sbjct: 494 QGAIDDYTQALNINPNYAQAYY---GRGIARFNLGDKQGAIDDYTQALNINPNYAQAYYN 550

Query: 552 -----SMLGDLELKNDDWVKA--------KETFRAASDATDGKDSYATLSLGNWNYFAAL 598
                + LGD +   DD+ +A        +  +      ++  D    ++    NY  AL
Sbjct: 551 RGIARTSLGDKQGAVDDYTQALNINPNYDQAYYAWGMVCSELGDKPGAVN----NYTQAL 606

Query: 599 RNEKRAP---------KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 649
                 P         + E    + A + YT+ +  +    Y  N  GVV ++   +  +
Sbjct: 607 NINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNPDYAYIYNNRGVVRSDIADYQRA 666

Query: 650 KDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 692
            D +TQ       ++     D + N    Y+  GN+  A+  Y
Sbjct: 667 IDDYTQAL-----NISPDYADAYYNRGIAYYDLGNYQSAIDDY 704


>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
 gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1711

 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 160/392 (40%), Gaps = 52/392 (13%)

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVL---EADRDNVP----ALLGQACVEFNRGRYSDSL 137
             W GKG +L ++   E+A  A K  +   E  +   P    AL      +   G+Y D+ 
Sbjct: 1242 AWYGKGLVLFSQEHYEEALKALKQAVPDGEESKIGEPELEDALTKIGLSQLKTGKYEDAC 1301

Query: 138  EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE--NVEALVALAVM 195
            + +++ L+ +P       L  GL    L Q   A +AF RAL++ P+    +    LA++
Sbjct: 1302 DTFEKVLEKNPMAADIWYLS-GLVMRGLDQNEDAVEAFNRALEIKPDLRAAQEQKGLALL 1360

Query: 196  DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
             L   E A      +      E  P  A  L   A   F T       +  E  L     
Sbjct: 1361 SLCRYEEA-----RDAFSSVLEESPENADVLYNRAVASFKTLNFEDAAKDLEKVLLFAPD 1415

Query: 256  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
             P  + + Y L  +     DYE+A L  +  V E    HE     Y +  V   L ++  
Sbjct: 1416 SPDYTEACYMLGIASIELQDYERA-LQALDMVLEWEPEHEEAL--YNMALVLFNLEEYEE 1472

Query: 316  ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            A   FE++LE  P++ E+L  LG   ++L  +++A +   KAA  +P++ +A  +    L
Sbjct: 1473 AARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEKAALFNPKNEEALYNAATTL 1532

Query: 376  ------------------ISSDTGAAL--------------DAFKTARTLLKKAGEEVPI 403
                              IS D    L              +A +    +LK+  E   I
Sbjct: 1533 IKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYREALRAFDGVLKRDPEN--I 1590

Query: 404  EVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 435
            + + N+GV+ F++  +E+A ++FK+AL    W
Sbjct: 1591 KAIYNVGVVCFKQKLYETAARAFKEALSINPW 1622



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 146/335 (43%), Gaps = 15/335 (4%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K +++  A Q + + + +D      W+ +G LL   G+ E+A +A + +LE D D   A 
Sbjct: 246 KLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQ 305

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
             +  V    GR+ ++L   +++L+  P     + L  GL     G+L  A  AF+ A +
Sbjct: 306 KLRGTVLAGLGRFEEALGPLEKSLEKEPENYN-LWLQKGLILLDTGKLEPAIDAFENAAR 364

Query: 181 LDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           L+P+N    +    A+  L+  E A     +E  +    + PY     N         G+
Sbjct: 365 LNPDNETCWMNMGFALYSLERYEEA-----LEAFKEGLRLNPYLETGWNRKGIVLGKLGK 419

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
                +  E A+ +    P    ++ N      +  + EKA   + A V +IN   E I 
Sbjct: 420 TGEALEAFEEAIKLR---PDFEDAWKNRGLLLFASEECEKAEEAF-AEVLKINP--EDID 473

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
             Y  G   LKLG   +AL   EKV+ + PD  +   +LG    +LG+ EKA E   K A
Sbjct: 474 SLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETFEKLA 533

Query: 359 KIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 392
             +P D +     G+L +   +   AL AF+   T
Sbjct: 534 SENPYDLEIQCRRGKLAMEVGNYETALQAFERILT 568



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 179/422 (42%), Gaps = 32/422 (7%)

Query: 35   YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 94
            +E++   N +     YL  +  +  ++ E    A + +N+A  I     +    KG  LL
Sbjct: 1304 FEKVLEKNPMAADIWYLSGLVMRGLDQNED---AVEAFNRALEIKPDLRAAQEQKGLALL 1360

Query: 95   AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
            +    E+A  AF  VLE   +N   L  +A   F    + D+ +  ++ L   P  P   
Sbjct: 1361 SLCRYEEARDAFSSVLEESPENADVLYNRAVASFKTLNFEDAAKDLEKVLLFAPDSPDYT 1420

Query: 155  RLG--IGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGME 210
                 +G+   +L    +A QA    L+ +PE+ EAL  +AL + +L+  E A       
Sbjct: 1421 EACYMLGIASIELQDYERALQALDMVLEWEPEHEEALYNMALVLFNLEEYEEAA-----R 1475

Query: 211  KMQRAFEIYPYCAMALNYLANHFFFTGQHFL-VEQLTETALAVTN---HGPTKSHSYYNL 266
              ++  E  P    +LNYL       G   L ++ L E   A        P    + YN 
Sbjct: 1476 TFEQLLETSPEDPESLNYL-------GLCLLELDNLKEALKAFEKAALFNPKNEEALYNA 1528

Query: 267  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
            A +   K +  +  L Y   + EI+  +  +  Y G+  +   L  +R AL  F+ VL+ 
Sbjct: 1529 ATTL-IKLNRAQESLGYFDRILEISPDNLDVLNYKGV--IFCMLDQYREALRAFDGVLKR 1585

Query: 327  YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 386
             P+N + +  +G +  +    E A    ++A  I+P   Q+   LG  L  +  G   +A
Sbjct: 1586 DPENIKAIYNVGVVCFKQKLYETAARAFKEALSINPWHEQSLRYLGISL--AKIGEYEEA 1643

Query: 387  FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 446
             K    LL+   ++V  + +N  GVI  +   F  A ++F + L   I+  + D++ K  
Sbjct: 1644 LKAFEKLLRINPQDV--QSMNYRGVILGKLERFGEAIRAFDEIL--RIYPDMADAREKLE 1699

Query: 447  VI 448
            V+
Sbjct: 1700 VL 1701



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 134/334 (40%), Gaps = 46/334 (13%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + + +A ++       W  +G LL A  E E+A  AF  VL+ + +++ +L  +    
Sbjct: 423 ALEAFEEAIKLRPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISL 482

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GR   +LE+ ++ + + P  P  +   +G+   +LG+  KA + F++    +P ++E
Sbjct: 483 LKLGRKETALEYLEKVVSLRPDYPD-LSYSLGVALTELGEYEKALETFEKLASENPYDLE 541

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                  +   A E       ++  +R     P    A       ++  G   L  +  E
Sbjct: 542 IQCRRGKL---AMEVGNYETALQAFERILTEKPASREA-------WYRKGLALLKLENFE 591

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            A+   +   TK               DYE AG+                      G  Q
Sbjct: 592 EAVKAFDAVATKD-------------ADYEDAGVLK--------------------GFAQ 618

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
           +KL +  SAL  FE+VLE  PD+       G I   L + E+A +    A++++P    A
Sbjct: 619 MKLKECASALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTA 678

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEV 401
           F    + L   +TG    AF+    +L+K  E +
Sbjct: 679 FEYRAKCLF--ETGQYEAAFEAFEAVLEKDPENL 710



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 169/379 (44%), Gaps = 32/379 (8%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV--P 118
           K E +  A + + +A  I+  +      KG L+LAK  +E+  SA +      R+N    
Sbjct: 42  KAERYEEALENFERALEINPKDSEACYAKG-LVLAK--LEKYDSALECFDSLTRENPRNE 98

Query: 119 ALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 177
             L Q C+   + G+   +LE  +  L+ +P+   A+    G+   +L +  +A + F +
Sbjct: 99  NALEQKCLLLAKIGKKDLALEALEDFLKKYPANEAAL-YHKGILLSELSRYEEAEKIFSK 157

Query: 178 ALQLDPENVEALV--ALAVMD-LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
            L+LDPEN EA      A++  L+ NEA      ++  + A +I P    A N      F
Sbjct: 158 VLKLDPENREAWFRKGFALVQLLRLNEA------IKAFEEAIKIDPSYFEAWN---CRCF 208

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
              +  + E+  E   ++    P     +Y+ A +     +Y +A +   A V E++  +
Sbjct: 209 ALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEA-VQSFARVTELDPEN 267

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           +  +   GL  +  + G    AL   EK+LE  PD  E  K  G +   LG+ E+A   L
Sbjct: 268 KDAWLQQGL--LLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEALGPL 325

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGV 411
            K+ + +P +   ++  G  LI  DTG    A+DAF+ A  L      E       N+G 
Sbjct: 326 EKSLEKEPENYNLWLQKG--LILLDTGKLEPAIDAFENAARL--NPDNET---CWMNMGF 378

Query: 412 IHFEKGEFESAHQSFKDAL 430
             +    +E A ++FK+ L
Sbjct: 379 ALYSLERYEEALEAFKEGL 397



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 124/340 (36%), Gaps = 93/340 (27%)

Query: 77  RIDMHEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
           RI   +P++   W  KG  LL     E+A  AF  V   D D   A + +   +      
Sbjct: 565 RILTEKPASREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKLKEC 624

Query: 134 SDSLEFYKRALQVHP------------------------SCPGAIRLGIGL--------- 160
           + +LE ++R L+  P                        +   A RL  GL         
Sbjct: 625 ASALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAK 684

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQAN------------------ 200
           C ++ GQ   A +AF+  L+ DPEN+ AL   A+ + +L+ N                  
Sbjct: 685 CLFETGQYEAAFEAFEAVLEKDPENLSALEKRAICLFELKKNKEAVDALSTLLESDPERK 744

Query: 201 ------EAAGIRKGME-----KMQRAFEIY----------------PYCAMALNYLANHF 233
                 E A +R G+E     + + A E++                P    ++ Y     
Sbjct: 745 DTKLRLEEAKLRLGIEYFELGQYENALELFEGINEKAEGIYEKTRDPQKPNSVLYWKGLV 804

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK- 292
           F   + +  E+  E    +T+  P  +  +Y    S    G YE+A   +  ++ EIN  
Sbjct: 805 FIRQEAY--EKAVEAFKGITDQDPNFAEGWYFTGLSCSKLGRYEEASEAFKKAL-EINSA 861

Query: 293 ---PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
               H+     Y LG    +LG F  AL  FEK  +  PD
Sbjct: 862 LRDTHDIC---YQLGISNFELGKFEEALKAFEKAFKTTPD 898



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 159/420 (37%), Gaps = 96/420 (22%)

Query: 93   LLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC------------------------- 125
            LL  G  ++A   FK V+  D DN  AL  L  AC                         
Sbjct: 918  LLRLGRYKEAEVGFKEVIFRDSDNAEALAHLSTACFKQEHYEEALEIFEKVLSQTPERKT 977

Query: 126  VEFNR-------GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
            V F +       G+  DSL+ +   L++ P C  A+    G   ++LG+ G+A +AF+ A
Sbjct: 978  VLFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALE-QRGYALFELGRYGEAAEAFKEA 1036

Query: 179  LQLDPEN--VEALVALAVMDLQANEAAGIRKGMEKMQRAFEI------YPYCAMALNYLA 230
            L+  P    ++ L  LA   +         + +E   +A E+       PY      Y  
Sbjct: 1037 LEYCPNKTYMQYLKGLAFFRI-----GNFTEALEGFGKALELGCQKPDIPY------YTG 1085

Query: 231  NHFFFTGQHF----LVEQLTETALAVTNHGPTKSHSYYNLAR------------------ 268
               F TG +       ++L E      +    ++ + + L R                  
Sbjct: 1086 LSCFETGDYAGALKAFDRLPEEGTQDPDVLQKRALALFELGRQEEAVSAVNFLLELSAEN 1145

Query: 269  -SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
             +   KG+ E  G     S +E N+  + +   +    ++  LG    AL   EK+    
Sbjct: 1146 LTIGEKGN-EPEGNEPEKSPEENNRICQELLEKFASALIE--LGKPEEALLPLEKLAREG 1202

Query: 328  PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDA 386
              + ETL   G   ++LG+ E+A E+     +I P   +A+   G +L S +    AL A
Sbjct: 1203 SASKETLYDRGIALLELGRQEEAFEIFSDLIEIYPDFKKAWYGKGLVLFSQEHYEEALKA 1262

Query: 387  FKTARTLLKKAGEEVPI------EVLNNIGVIHFEKGEFESAHQSF-----KDALGDGIW 435
             K A       GEE  I      + L  IG+   + G++E A  +F     K+ +   IW
Sbjct: 1263 LKQAVP----DGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMAADIW 1318


>gi|118360928|ref|XP_001013695.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89295462|gb|EAR93450.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 507

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 142/305 (46%), Gaps = 33/305 (10%)

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
           V+   G++  + + +  AL+++P    A   G+G+   +   + ++ Q FQ++L+L+P++
Sbjct: 18  VQIGMGQFEKAKKSFYSALEINPQSAYA-YCGLGIIYSEQNMIKESEQYFQKSLELNPKS 76

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-----YPYCAMALNYLANHFFFTGQHF 240
              L  L ++    ++   I + +   Q+A E        Y  + L YL         H 
Sbjct: 77  AVTLCNLGIL---FDKCGTIDQRIFYYQQAIESDRSIDQSYNGLGLAYLDKQM-----HE 128

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP- 299
             +QL +  L V    P   ++Y NLA  +  + +Y+++ +  +    +I++  +  F  
Sbjct: 129 NAKQLFQKCLEVN---PQNFNAYLNLATIFRIESNYQES-IVCLERCLKIDRQSDKTFSI 184

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           YY L     +LG    A+   +K +EI P        +G+IY ++G +E++Q+ L  + K
Sbjct: 185 YYYLADAYQQLGMMEDAIEYLKKTIEIEPQQYFLHDKIGYIYEKMGNLEESQKHLETSLK 244

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 417
           I+P  A    +L  LL              AR L +K  +  P  + +L N+G  +++ G
Sbjct: 245 INPESAGTLANLAHLL------------DKARDLYEKLLKLEPNSVTILLNLGGCYYKLG 292

Query: 418 EFESA 422
           +FE A
Sbjct: 293 QFEQA 297



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 158/373 (42%), Gaps = 47/373 (12%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G + +  G+ E+A  +F   LE +  +  A  G   +   +    +S ++++++L+++P 
Sbjct: 16  GNVQIGMGQFEKAKKSFYSALEINPQSAYAYCGLGIIYSEQNMIKESEQYFQKSLELNPK 75

Query: 150 CPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIR 206
              A+ L  +G+   K G + +    +Q+A++ D    ++   + LA +D Q +E A   
Sbjct: 76  --SAVTLCNLGILFDKCGTIDQRIFYYQQAIESDRSIDQSYNGLGLAYLDKQMHENAK-- 131

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
              +  Q+  E+ P    A   LA  F     +       E  L +          YY L
Sbjct: 132 ---QLFQKCLEVNPQNFNAYLNLATIFRIESNYQESIVCLERCLKIDRQSDKTFSIYYYL 188

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA---------- 316
           A +Y   G  E A + Y+    EI +P ++ F +  +G +  K+G+   +          
Sbjct: 189 ADAYQQLGMMEDA-IEYLKKTIEI-EPQQY-FLHDKIGYIYEKMGNLEESQKHLETSLKI 245

Query: 317 -------LTN-----------FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
                  L N           +EK+L++ P++   L  LG  Y +LGQ E+A +  +   
Sbjct: 246 NPESAGTLANLAHLLDKARDLYEKLLKLEPNSVTILLNLGGCYYKLGQFEQAIKYNQNIL 305

Query: 359 KIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
            IDP++  A  + G +      T  A+  F+ +     K G+ +      N+G+IH + G
Sbjct: 306 SIDPKNYLANFNQGIIYYQKGMTENAIKYFQKSFQSKSKYGDAIY-----NLGIIHGQNG 360

Query: 418 EFESAHQSFKDAL 430
             + A    K AL
Sbjct: 361 NLQEAEYFNKLAL 373



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y  LG VQ+ +G F  A  +F   LEI P +      LG IY +   I+++++  +K+ +
Sbjct: 12  YEDLGNVQIGMGQFEKAKKSFYSALEINPQSAYAYCGLGIIYSEQNMIKESEQYFQKSLE 71

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV---LNNIGVIHFEK 416
           ++P+ A    +LG L    D    +D     R    +   E    +    N +G+ + +K
Sbjct: 72  LNPKSAVTLCNLGILF---DKCGTID----QRIFYYQQAIESDRSIDQSYNGLGLAYLDK 124

Query: 417 GEFESAHQSFKDAL 430
              E+A Q F+  L
Sbjct: 125 QMHENAKQLFQKCL 138


>gi|297538184|ref|YP_003673953.1| hypothetical protein M301_0992 [Methylotenera versatilis 301]
 gi|297257531|gb|ADI29376.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera versatilis
           301]
          Length = 1193

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 141/313 (45%), Gaps = 26/313 (8%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A +YY KA ++  +        G +L +   +EQA +++K  L  + DNV A+   A V 
Sbjct: 125 AAKYYKKAIKLTPNFAKAHYNLGNVLKSLNSLEQAKASYKCALRIEVDNVQAMCNLAQVL 184

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           + +  +S+++ ++++AL +  +   A  +G+G      GQL  A   F++A+ ++P + E
Sbjct: 185 YEQDFFSEAIIYFQQALSIQDNFSIA-YVGLGAAFQATGQLPGAEANFRKAIAINPNDAE 243

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF--LVEQL 245
           AL  L           G+ K + ++  A EI   C   L  +    F T      L++ +
Sbjct: 244 ALSNL----------GGVLKTLGRLSEA-EI---CYRTLLTITPENFDTYIKLGSLLKSM 289

Query: 246 TETALAVTNHGPTKS------HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
              A +        S       +  +L  +   +G Y +A   Y  ++K   +P+ F   
Sbjct: 290 GNIAESTACFKKALSINSQLEEAQNDLGLALAEQGRYSEAEACYQNAIKI--EPN-FWKA 346

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y  LG     +G F  A   F+K + +  +       L    V  GQI++A+  LR+A +
Sbjct: 347 YNNLGLTLYNMGRFNEAEAAFDKAITLDANEALIYSNLSLPLVAQGQIKRAEACLRRAIE 406

Query: 360 IDPRDAQAFIDLG 372
           ++P    A+I+LG
Sbjct: 407 VNPEYVNAYINLG 419



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 9/167 (5%)

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           NLA+  + +  + +A +Y+    + ++    F   Y GLG      G    A  NF K +
Sbjct: 179 NLAQVLYEQDFFSEAIIYFQ---QALSIQDNFSIAYVGLGAAFQATGQLPGAEANFRKAI 235

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAA 383
            I P++ E L  LG +   LG++ +A+   R    I P +   +I LG LL S  +   +
Sbjct: 236 AINPNDAEALSNLGGVLKTLGRLSEAEICYRTLLTITPENFDTYIKLGSLLKSMGNIAES 295

Query: 384 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              FK A ++  +       E  N++G+   E+G +  A   +++A+
Sbjct: 296 TACFKKALSINSQLE-----EAQNDLGLALAEQGRYSEAEACYQNAI 337



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 17/260 (6%)

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           F +  LG V  +LG F  A    +K  +  P + E    LG+ +    Q++ A +  +KA
Sbjct: 73  FGWKVLGAVFQQLGLFEQAHDALQKAADFLPKDSEAQYNLGNFFYDQQQLDDAAKYYKKA 132

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA--GEEVPIEVLNNIGVIHFE 415
            K+ P  A+A  +LG +L S      L++ + A+   K A   E   ++ + N+  + +E
Sbjct: 133 IKLTPNFAKAHYNLGNVLKS------LNSLEQAKASYKCALRIEVDNVQAMCNLAQVLYE 186

Query: 416 KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 475
           +  F  A   F+ AL      ++ D+ +  YV   +A        QL     N    + +
Sbjct: 187 QDFFSEAIIYFQQAL------SIQDNFSIAYVGLGAAFQ---ATGQLPGAEANFRKAIAI 237

Query: 476 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
             N    L NL  +L+ +     A + YR +L    +  D Y++L ++ K+  N+  S  
Sbjct: 238 NPNDAEALSNLGGVLKTLGRLSEAEICYRTLLTITPENFDTYIKLGSLLKSMGNIAESTA 297

Query: 536 LVNEALKVNGKYPNALSMLG 555
              +AL +N +   A + LG
Sbjct: 298 CFKKALSINSQLEEAQNDLG 317


>gi|224532341|ref|ZP_03672973.1| TPR domain protein [Borrelia valaisiana VS116]
 gi|224511806|gb|EEF82212.1| TPR domain protein [Borrelia valaisiana VS116]
          Length = 379

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAS--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLKEFTR-GIYFFKKALEIS-PSNF-YAIFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWFDIIEKDPKNNLVLTRIGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325


>gi|422302736|ref|ZP_16390095.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9806]
 gi|389787980|emb|CCI16710.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9806]
          Length = 565

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 143/301 (47%), Gaps = 29/301 (9%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ +G  LLA+GE E A SA++ VL  D ++V A +  A V  ++ RYS++LE Y RA  
Sbjct: 41  YLWQGDQLLAEGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALEAYDRAFI 100

Query: 146 VHPSCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQ- 198
           V+   P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ 
Sbjct: 101 VNDQPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAMIIKPTFKGQFQLGKALYSLQR 160

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-- 256
            +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A         
Sbjct: 161 WDEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALE 207

Query: 257 --PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF-IFPYYGLGQVQLKLGDF 313
             P +  +Y  L  +   +G +E+A   Y  ++  I  P +  I+ Y  LGQ   + G  
Sbjct: 208 LIPNQGETYKKLGETLAKQGKWEEAEQIYRQAL--IYSPKDGDIYNY--LGQALAEQGKL 263

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
            +A+  F++  +I P N E  + L +IY+  GQI++     R+A +IDP  ++    L E
Sbjct: 264 GAAMAVFQQARQISPKNAEIYENLCYIYINNGQIDEGLNWCRQAVEIDPNLSEVRFILEE 323

Query: 374 L 374
           +
Sbjct: 324 I 324


>gi|381160360|ref|ZP_09869592.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiorhodovibrio sp. 970]
 gi|380878424|gb|EIC20516.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiorhodovibrio sp. 970]
          Length = 914

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 154/360 (42%), Gaps = 54/360 (15%)

Query: 74  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE--ADRDNVPALLGQACVEFNRG 131
           +A ++D H  S    + +LL A+GE+ +A ++++  LE   ++ N    LG    E   G
Sbjct: 169 RALQLDSHLASAHANRARLLRARGELMEAEASYRRALELAPEQPNTHYNLGNLLEEL--G 226

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           R  D+   Y+ AL++ P    A    +G   +  G+L +AR+AF +A+   P+  +A + 
Sbjct: 227 RVDDAEHSYREALRLQPRFAAAAN-NLGAILHADGRLEQAREAFVQAIADAPDLADAHLN 285

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
           L ++  + NE    R  +E+   A  + P C  A + L               LT+  L 
Sbjct: 286 LGIVTRELNEPEQARGLLEQ---AVALDPECGDAWHQLG--------------LTQARLE 328

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV-KEINKPHEFIFPYYGLGQVQLKL 310
                                  D+EKA      SV + +    E    +  L QV + L
Sbjct: 329 -----------------------DFEKA----RDSVERALELSPENADCHLTLAQVHVML 361

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
            D+ SA+  +   L + P +  T  ALG+ +  L Q  +A+E  R+A   DPR AQA   
Sbjct: 362 EDYPSAIGCYHNALALTPAHAPTWVALGNAHTSLEQHTQAEEAYRRAITADPRCAQAHAQ 421

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           LG  L     G        A      A E   +  L  +G +  E G+ E++ ++++ AL
Sbjct: 422 LGFCL----NGQQRYQEALAALDQALALEPDSVLALGTLGRVRMELGQLEASAEAYRRAL 477



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 54/308 (17%)

Query: 303 LGQVQL--KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           LG+V    + GD ++AL   E+V   +P      ++L  IY QLG++  A    R+A  +
Sbjct: 80  LGRVTTLAQAGDLQAALALNEQVTRGWPQQAAGWRSLTDIYRQLGRLPDAIAAAREAIAL 139

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE----- 415
            P DA    +L  LLIS    A  DA       L++A     +++ +++   H       
Sbjct: 140 APGDASGHANLASLLISGGDLAQADAS------LERA-----LQLDSHLASAHANRARLL 188

Query: 416 --KGEFESAHQSFKDALGDGIWLTLLDSKTKTY------------VIDASASMLQFKDMQ 461
             +GE   A  S++ A      L L   +  T+            V DA  S  +   ++
Sbjct: 189 RARGELMEAEASYRRA------LELAPEQPNTHYNLGNLLEELGRVDDAEHSYREA--LR 240

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
           L  RF    N      N   +L    R LEQ  +    ++          D  DA+L L 
Sbjct: 241 LQPRFAAAAN------NLGAILHADGR-LEQAREAFVQAI------ADAPDLADAHLNLG 287

Query: 522 AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDG 580
            + +  N  + +  L+ +A+ ++ +  +A   LG  + + +D+ KA+++  RA   + + 
Sbjct: 288 IVTRELNEPEQARGLLEQAVALDPECGDAWHQLGLTQARLEDFEKARDSVERALELSPEN 347

Query: 581 KDSYATLS 588
            D + TL+
Sbjct: 348 ADCHLTLA 355


>gi|428317844|ref|YP_007115726.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428241524|gb|AFZ07310.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 710

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 138/327 (42%), Gaps = 34/327 (10%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y++A  +       W G+G  L    + ++A ++F   L+   D   A  G+  V  +  
Sbjct: 403 YDRAIELKPEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLDSQ 462

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           RY +++  Y++A+Q  P+  GA     G    KL Q  +A +++Q+A+++  +N EA   
Sbjct: 463 RYEEAIASYEKAVQFQPNLYGAW-YNRGQAHQKLKQYDRAVESYQKAVEIKFDNYEAWYN 521

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV----EQLTE 247
           L  + L+ N          K Q AFE Y             ++  G   L     E+  E
Sbjct: 522 LGNVFLELN----------KNQEAFEAYEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVE 571

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
                    P    ++YNL  SYH    YE+A   Y  ++ ++N P E+   +Y  G  Q
Sbjct: 572 AYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRAL-DLN-PKEYQ-AWYNRGNAQ 628

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             L  +  AL ++ + + + PD  E   + G+  V + + E A     KA +  P     
Sbjct: 629 SNLKRYEDALVSYNEAVYVKPDYSEAWYSRGNALVAVKRYEDAIASYDKAIRYKP----- 683

Query: 368 FIDLGELLISSDTGAALDAFKTARTLL 394
                      D GAA++A K A + L
Sbjct: 684 -----------DYGAAMEAKKRAESQL 699



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 50/294 (17%)

Query: 116 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           N   L  +    +N  R+ ++L  Y+RA+ + P     +        YKL +  +++ A+
Sbjct: 345 NATDLYNRGNTLYNLSRFEEALAAYERAITLRPDY-AEVWQEKAKTLYKLKKYQESQAAY 403

Query: 176 QRALQLDPENVEALVA--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
            RA++L PE +EA      A+  LQ ++ A     +     A +I P  A A        
Sbjct: 404 DRAIELKPEYLEAWTGRGYALEKLQQSQEA-----IASFDNALKIQPDYAAAWE------ 452

Query: 234 FFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK- 288
              G   L  Q  E A+A         P    ++YN  +++     Y++A   Y  +V+ 
Sbjct: 453 -GRGDVLLDSQRYEEAIASYEKAVQFQPNLYGAWYNRGQAHQKLKQYDRAVESYQKAVEI 511

Query: 289 ----------------EINKPHE--------------FIFPYYGLGQVQLKLGDFRSALT 318
                           E+NK  E              F   +Y  G   LK+     A+ 
Sbjct: 512 KFDNYEAWYNLGNVFLELNKNQEAFEAYEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVE 571

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
            +EK +++ PD  +    LG  Y +L + E+A E   +A  ++P++ QA+ + G
Sbjct: 572 AYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLNPKEYQAWYNRG 625


>gi|428771391|ref|YP_007163181.1| hypothetical protein Cyan10605_3080 [Cyanobacterium aponinum PCC
           10605]
 gi|428685670|gb|AFZ55137.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
           aponinum PCC 10605]
          Length = 1134

 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 60/357 (16%)

Query: 129 NRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL- 179
           N+G Y  +   Y+ ALQV        HP    A+   +GL     G   KA+  ++RAL 
Sbjct: 186 NQGNYEGAQPLYEEALQVYFLVLGENHPDTATAMN-NLGLLYQYQGDYQKAQNFYERALT 244

Query: 180 -------QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY--------PYCAM 224
                  Q  P+  + L  +A++   A       +     + A  IY        P  A 
Sbjct: 245 VRKQVSGQKSPDVAQTLNNMALL---AENKGDYPRAEALYKEAIAIYREVLGNNHPDTAT 301

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNH-----GPTKSHSYYNLARSYHSKGDYEKA 279
           +LN L   +++ G +   E L +  LA+         P  + S  NLA  YHS+G++++A
Sbjct: 302 SLNNLGLLYYYQGNYIAAEPLFKETLAIRQQILGAKHPDVALSLNNLALLYHSQGNHQEA 361

Query: 280 GLYYMASV---KEI---NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI------- 326
              Y  ++   KE+   N P+        LG++    G++ SA   +++ L I       
Sbjct: 362 ESLYQDAIAIQKEVLGKNHPNTAT-SLNNLGELYRIQGNYESAQPLYQESLSIRLKVLGE 420

Query: 327 -YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELL-I 376
            +PD  ++L  L  +Y  LG  + A+EL ++A KI         P  A +F +LGEL  I
Sbjct: 421 KHPDTAQSLNNLALLYYSLGDYQTAEELYQQALKIHQEVLGEKHPFTATSFNNLGELYRI 480

Query: 377 SSDTGAALDAFKTARTLLKKA-GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                 A   ++ + T+ K+  GE  P   +  NN+ ++++ +G ++SA   +K A+
Sbjct: 481 QGKYETAAPFYQQSLTIRKEILGENHPDVAQSFNNLALLYYNQGNYQSAEPLYKQAI 537


>gi|328952032|ref|YP_004369366.1| hypothetical protein Desac_0294 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 599

 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 175/417 (41%), Gaps = 64/417 (15%)

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G L  A ++++ A+Q DP++ +  + +A + ++  +   I++ +  +++A  + P     
Sbjct: 83  GNLEDALRSYEAAIQCDPKSAQLEIEMAALLIRKGD---IKEALAHLEKAISLDP----- 134

Query: 226 LNYLANHFFFTGQHFLVEQLTETAL---AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
            N+L  H    G H  + QL E       +    P    +   LA  +  +G+  KA   
Sbjct: 135 -NHLEAHQLLAGLHTGMNQLREATTEYEKIITLDPANEEAVIFLATLHAQQGNCAKAVNL 193

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
               +K+   P +FI  +Y LG+  ++LG   +A   F++ L   P+    +  LG +Y 
Sbjct: 194 LKNLIKK--NPDQFIALFY-LGKCYIELGQLTAAKKEFQQALHKQPEFLPAMLELGFVYE 250

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEV 401
              +  +A+ + R+  + DP + +A+  LG L L++     AL AF      +K+  +  
Sbjct: 251 LEKRYSQAKTMYRRILRHDPDNQRAWASLGRLYLLNDQYTEALQAFGE----IKRISKNE 306

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
           P E    IG++ FE+  F+ A + F++                                 
Sbjct: 307 P-ETALRIGLLFFEQKYFDDAIREFREV-------------------------------- 333

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
           L  R   D              F LA  LE+  D VAA   Y  I  + + Y+ A LR+A
Sbjct: 334 LISRKGPDQAR-----------FFLAAALEEKGDLVAAMREYEQISRQSESYIPARLRMA 382

Query: 522 AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 578
            I   +  +   I+++ ++L +  K  +    L     +  ++VKA ET   A + T
Sbjct: 383 YILGRQKKISQGIKIIKDSLVLFPKNGDLYLTLAAFYEEEQEYVKAIETLNQALENT 439



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 147/336 (43%), Gaps = 25/336 (7%)

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
           QA + ++ +L  D DN  A      +     +Y+++L+ +    ++  + P    L IGL
Sbjct: 257 QAKTMYRRILRHDPDNQRAWASLGRLYLLNDQYTEALQAFGEIKRISKNEPET-ALRIGL 315

Query: 161 CRYKLGQLGKARQAFQRAL--QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
             ++      A + F+  L  +  P+     +A A ++ + +  A +R+  E++ R  E 
Sbjct: 316 LFFEQKYFDDAIREFREVLISRKGPDQARFFLA-AALEEKGDLVAAMRE-YEQISRQSES 373

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
           Y    + + Y+       G+   + Q  +         P     Y  LA  Y  + +Y K
Sbjct: 374 YIPARLRMAYI------LGRQKKISQGIKIIKDSLVLFPKNGDLYLTLAAFYEEEQEYVK 427

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A      +++    P E    Y+ L  V  K  +   +    +KVLE+ P+N E L  LG
Sbjct: 428 AIETLNQALENTVNPSEV---YFRLAVVYDKKKENAESQRLIKKVLELEPNNAEALNFLG 484

Query: 339 HIY-VQLGQIEKAQELLRKAAKIDPRDAQAFID-LGELLISSDTGAALDAFKTARTLLKK 396
           ++Y  Q   +++A+ L++ A  I P DA   ID LG +            +  A  +L+K
Sbjct: 485 YMYACQGANLDEAERLIQTALAIKP-DAGYIIDSLGWVYYKKGL------YDQAVLILEK 537

Query: 397 AGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 430
           A +++P +  +  ++G  + +K  F  A + +K AL
Sbjct: 538 AHQQMPQDGTIAEHLGDAYMKKSRFRDALRLYKKAL 573



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 85/398 (21%), Positives = 164/398 (41%), Gaps = 91/398 (22%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
           ++ +A++ ++ ++  D  N  A++  A +   +G  + ++   K  ++ +P    A+   
Sbjct: 152 QLREATTEYEKIITLDPANEEAVIFLATLHAQQGNCAKAVNLLKNLIKKNPDQFIAL-FY 210

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQA----------------- 199
           +G C  +LGQL  A++ FQ+AL   PE + A++ L  V +L+                  
Sbjct: 211 LGKCYIELGQLTAAKKEFQQALHKQPEFLPAMLELGFVYELEKRYSQAKTMYRRILRHDP 270

Query: 200 -NEAAGIRKG---------MEKMQRAFEIY------PYCAMALNYLANHFFFTGQHF--L 241
            N+ A    G          E +Q   EI       P  A+ +  L    FF  ++F   
Sbjct: 271 DNQRAWASLGRLYLLNDQYTEALQAFGEIKRISKNEPETALRIGLL----FFEQKYFDDA 326

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD-----------------YEKAGL--- 281
           + +  E  + ++  GP ++  +  LA +   KGD                 Y  A L   
Sbjct: 327 IREFRE--VLISRKGPDQARFF--LAAALEEKGDLVAAMREYEQISRQSESYIPARLRMA 382

Query: 282 YYMASVKEINKPHEFI------FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
           Y +   K+I++  + I      FP    G + L L  F      + K +E      E   
Sbjct: 383 YILGRQKKISQGIKIIKDSLVLFPKN--GDLYLTLAAFYEEEQEYVKAIETLNQALENTV 440

Query: 336 ALGHIYVQLGQI-------EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD--- 385
               +Y +L  +        ++Q L++K  +++P +A+A   LG +      GA LD   
Sbjct: 441 NPSEVYFRLAVVYDKKKENAESQRLIKKVLELEPNNAEALNFLGYMYACQ--GANLDEAE 498

Query: 386 -AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
              +TA  +   AG      +++++G ++++KG ++ A
Sbjct: 499 RLIQTALAIKPDAG-----YIIDSLGWVYYKKGLYDQA 531


>gi|452210866|ref|YP_007490980.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
 gi|452100768|gb|AGF97708.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
          Length = 398

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 143/339 (42%), Gaps = 55/339 (16%)

Query: 33  VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 92
           +  E   + N +   Y+ +G+ E            A + Y KA  +    P+ W GK   
Sbjct: 114 INSEDADLWNNMAFSYSQIGEYEK-----------AVEAYGKALDLKPDYPNAWYGKALN 162

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           L   G  E+A  A+ IVL+ + +   A  G+       G Y +++  Y +AL++ P    
Sbjct: 163 LSQAGRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLE 222

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A     G+    LG   +A +A+++A+++DPEN +A   + + DL+          +E+ 
Sbjct: 223 AWYYK-GVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGI-DLE---------NLERY 271

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
             A               N F             E A+ + +     S  +YN   +   
Sbjct: 272 DEAI--------------NAF-------------EKAIEINSE---NSDVWYNKGFTLSQ 301

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
              +++A   Y  +V+      E++  Y  LG V  +L  F  AL  +EK L++ P+  +
Sbjct: 302 VQRFDEAVEAYRKAVQ---LDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAAD 358

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           +          LG+ E+A++  RKA +IDPR A+   D+
Sbjct: 359 SWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEIGGDI 397



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
            F  A + Y +A +I+  +   W          GE E+A  A+   L+   D   A  G+
Sbjct: 100 RFEEALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGK 159

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           A      GRY ++++ Y   L+ + +   A   G G+   ++G   +A  A+ +AL++DP
Sbjct: 160 ALNLSQAGRYEEAVDAYDIVLKENSNYKEAWA-GKGIALGQMGNYDEAIIAYDKALEIDP 218

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           E +EA     V DL +      ++ ++  ++A EI P                       
Sbjct: 219 EFLEAWYYKGV-DLDS--LGSFKQALKAYEKAVEIDP----------------------- 252

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG- 302
              E   A  N G        NL R   +   +EKA         EIN  +  ++   G 
Sbjct: 253 ---ENDDAWNNMGIDLE----NLERYDEAINAFEKA--------IEINSENSDVWYNKGF 297

Query: 303 -LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            L QVQ     F  A+  + K +++ P+  E   +LG +  QL + E+A ++  KA K+D
Sbjct: 298 TLSQVQR----FDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLD 353

Query: 362 PRDAQAFI 369
           P  A ++ 
Sbjct: 354 PEAADSWF 361



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 21/220 (9%)

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           GL   +LG+  +A  AF++A+  DP N+  L          N  A   + + + + A ++
Sbjct: 58  GLDLLRLGKYNEAIIAFEKAIDKDPGNIYLL----------NNKAAALESLGRFEEALKL 107

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLARSYHS 272
           Y   A+ +N   +   +    F   Q+ E   AV  +G      P   +++Y  A +   
Sbjct: 108 YQ-EAVKIN-SEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQ 165

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
            G YE+A   Y   +KE +   E    + G G    ++G++  A+  ++K LEI P+  E
Sbjct: 166 AGRYEEAVDAYDIVLKENSNYKE---AWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLE 222

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
                G     LG  ++A +   KA +IDP +  A+ ++G
Sbjct: 223 AWYYKGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMG 262



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 141/315 (44%), Gaps = 30/315 (9%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  LL  G+  +A  AF+  ++ D  N+  L  +A    + GR+ ++L+ Y+ A++++ S
Sbjct: 58  GLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKIN-S 116

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
               +   +     ++G+  KA +A+ +AL L P+   A    A+   QA          
Sbjct: 117 EDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAG--------- 167

Query: 210 EKMQRAFEIYPYCAMALNYLANHF-FFTGQHFLVEQLTETALAVTNH------GPTKSHS 262
            + + A + Y    + L   +N+   + G+   + Q+     A+  +       P    +
Sbjct: 168 -RYEEAVDAYD---IVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEA 223

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           +Y       S G +++A   Y  +V EI+  ++  +   G+    L+   +  A+  FEK
Sbjct: 224 WYYKGVDLDSLGSFKQALKAYEKAV-EIDPENDDAWNNMGIDLENLER--YDEAINAFEK 280

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 382
            +EI  +N +     G    Q+ + ++A E  RKA ++DP   +A+  LG +L      A
Sbjct: 281 AIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVL------A 334

Query: 383 ALDAFKTARTLLKKA 397
            L  F+ A  + +KA
Sbjct: 335 QLKRFEEALDIYEKA 349


>gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
          Length = 725

 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 46/343 (13%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A +    + R D   P  +   G++L   G+ E A   F+  L+ ++         A   
Sbjct: 59  AVELIQASIREDESNPIPFFNLGKILAIAGQHENAVGVFQEALKRNQQIPETWFCFANAL 118

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G+  ++ + Y+ ALQ++P+  GA    +G      G+L +A Q F +A+   P NV 
Sbjct: 119 REIGKTEEAKQAYRNALQLNPAHAGAAG-NLGALLTDDGELDEAEQLFVKAVDQYPNNVN 177

Query: 188 ALV------------ALAVMDLQ----------------AN---EAAGIRKGMEKMQRAF 216
             +            A A+M  Q                AN   E   + + +   ++A 
Sbjct: 178 LRINYGRLLAEKAEHAAAIMQYQIALPLAPQSPELHYNFANALKEEGDVEEAIASYRKAI 237

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHS 272
           E+ P         A+ +F  G     E   E A+A         P  + +Y+ L      
Sbjct: 238 EVKPD-------FADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKE 290

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           +GD E+A   Y  +++   KP +F   Y+ LG V  + GD   A+ ++ K +E+ PD  +
Sbjct: 291 EGDVEEAIASYRKAIE--VKP-DFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFAD 347

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
              ALG +  + G +E+A    RKA ++ P  A A+++LG +L
Sbjct: 348 AYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYLNLGNVL 390



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 167/378 (44%), Gaps = 70/378 (18%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP------ 151
           +++ A + FK +L  +     AL    C+  +RG++  ++E  + +++   S P      
Sbjct: 21  DLDGAEAVFKQILAVNPKEPNALHLLGCIYKDRGQHQQAVELIQASIREDESNPIPFFNL 80

Query: 152 -------GAIRLGIGLCRYKL--------------------GQLGKARQAFQRALQLDPE 184
                  G     +G+ +  L                    G+  +A+QA++ ALQL+P 
Sbjct: 81  GKILAIAGQHENAVGVFQEALKRNQQIPETWFCFANALREIGKTEEAKQAYRNALQLNPA 140

Query: 185 NVEA---LVALAVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHF 240
           +  A   L AL   D + +EA  +        +A + YP    + +NY        G+  
Sbjct: 141 HAGAAGNLGALLTDDGELDEAEQL------FVKAVDQYPNNVNLRINY--------GR-- 184

Query: 241 LVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
           L+ +  E A A+  +       P     +YN A +   +GD E+A   Y  +++   KP 
Sbjct: 185 LLAEKAEHAAAIMQYQIALPLAPQSPELHYNFANALKEEGDVEEAIASYRKAIE--VKP- 241

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           +F   Y+ LG V  + GD   A+ ++ K +E+ PD  +   ALG +  + G +E+A    
Sbjct: 242 DFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASY 301

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVI 412
           RKA ++ P  A A+  LG  L+  + G   +A  + R    KA E  P   +    +G++
Sbjct: 302 RKAIEVKPDFADAYFALG--LVMKEEGDVEEAIASYR----KAIEVKPDFADAYFALGLV 355

Query: 413 HFEKGEFESAHQSFKDAL 430
             E+G+ E A  S++ A+
Sbjct: 356 MKEEGDVEEAIASYRKAI 373



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 131/291 (45%), Gaps = 18/291 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q Y  A +++          G LL   GE+++A   F   ++   +NV   +    + 
Sbjct: 127 AKQAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEQLFVKAVDQYPNNVNLRINYGRLL 186

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
             +  ++ ++  Y+ AL + P  P  +         + G + +A  ++++A+++ P+  +
Sbjct: 187 AEKAEHAAAIMQYQIALPLAPQSP-ELHYNFANALKEEGDVEEAIASYRKAIEVKPDFAD 245

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A  AL    L   E   + + +   ++A E+ P         A+ +F  G     E   E
Sbjct: 246 AYFALG---LVMKEEGDVEEAIASYRKAIEVKPD-------FADAYFALGLVMKEEGDVE 295

Query: 248 TALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            A+A         P  + +Y+ L      +GD E+A   Y  +++   KP +F   Y+ L
Sbjct: 296 EAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIE--VKP-DFADAYFAL 352

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           G V  + GD   A+ ++ K +E+ PD  +    LG++  + G+I++A++++
Sbjct: 353 GLVMKEEGDVEEAIASYRKAIEVKPDFADAYLNLGNVLKEEGEIDEARQII 403



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 75/359 (20%), Positives = 144/359 (40%), Gaps = 37/359 (10%)

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
           AL+ L   +   GQH   +Q  E   A      +    ++NL +     G +E A   + 
Sbjct: 42  ALHLLGCIYKDRGQH---QQAVELIQASIREDESNPIPFFNLGKILAIAGQHENAVGVFQ 98

Query: 285 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
            ++K   +  E    ++       ++G    A   +   L++ P +      LG +    
Sbjct: 99  EALKRNQQIPE---TWFCFANALREIGKTEEAKQAYRNALQLNPAHAGAAGNLGALLTDD 155

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPI 403
           G++++A++L  KA    P +    I+ G LL   ++  AA+  ++ A  L  ++ E    
Sbjct: 156 GELDEAEQLFVKAVDQYPNNVNLRINYGRLLAEKAEHAAAIMQYQIALPLAPQSPE---- 211

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDAL------GDGIWLTLLDSKTKTYVIDASASMLQ- 456
            +  N      E+G+ E A  S++ A+       D  +   L  K +  V +A AS  + 
Sbjct: 212 -LHYNFANALKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKA 270

Query: 457 ------FKD----MQLFHRFENDGNH--------VELPWNKVTVLFNLARLLEQIHDTVA 498
                 F D    + L  + E D           +E+  +     F L  ++++  D   
Sbjct: 271 IEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEE 330

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
           A   YR  +    D+ DAY  L  + K   +++ +I    +A++V   + +A   LG++
Sbjct: 331 AIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYLNLGNV 389


>gi|82702040|ref|YP_411606.1| hypothetical protein Nmul_A0911 [Nitrosospira multiformis ATCC
           25196]
 gi|82410105|gb|ABB74214.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
          Length = 875

 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 9/213 (4%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
           +K G L +A   +Q  LQLDP + +AL  L ++   A +A  I  G+E ++RA    P  
Sbjct: 54  HKRGNLSQAEAIYQHILQLDPNHPDALHFLGLL---ARDAGRIDIGIELIKRALRFKPNY 110

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
             A N L N     G+  L + +     AV    P  + +Y NL  +   +G  + A + 
Sbjct: 111 VEAHNNLGNTLRQQGK--LNDAIASYRTAVKLE-PRFAEAYGNLGNALREQGRLDDAMIN 167

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
           Y    K +    +    +  +G V  + GD  +A+++F K L + PD+ E    LG++ V
Sbjct: 168 YR---KALGIQPQLAEMHCNIGIVHREQGDLENAVSSFRKALLLKPDSAEAFNNLGNVLV 224

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           + G+ E+A     KA    P+  +AF +LG  L
Sbjct: 225 EQGKFEEAVSSFGKAILYKPQFPEAFNNLGNAL 257



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 34/170 (20%)

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
           P + I  Y        K G+   A   ++ +L++ P++ + L  LG +    G+I+   E
Sbjct: 39  PRQSILQYLQAAVEHHKRGNLSQAEAIYQHILQLDPNHPDALHFLGLLARDAGRIDIGIE 98

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK----------------- 395
           L+++A +  P   +A  +LG  L     G   DA  + RT +K                 
Sbjct: 99  LIKRALRFKPNYVEAHNNLGNTL--RQQGKLNDAIASYRTAVKLEPRFAEAYGNLGNALR 156

Query: 396 -------------KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                        KA    P   E+  NIG++H E+G+ E+A  SF+ AL
Sbjct: 157 EQGRLDDAMINYRKALGIQPQLAEMHCNIGIVHREQGDLENAVSSFRKAL 206


>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
          Length = 815

 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 113/535 (21%), Positives = 221/535 (41%), Gaps = 45/535 (8%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           +N A + D +    ++ +G L   +GE E+A   +   ++ +R+   A + +  +    G
Sbjct: 267 FNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLG 326

Query: 132 RYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
               +L+ Y +A++++P    G    G+  C  +LG+  KA Q F+  ++L+P    A  
Sbjct: 327 ETKKALQDYNQAIRLNPQYAIGYYNRGVLFC--ELGEKQKALQDFKNVIRLNPNYATAYQ 384

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
              V+     E   I   ++    A ++ P  A A  Y      F  Q  +   LT+  +
Sbjct: 385 NRGVL---YGEQGEIENALKDFDMAIKLNPNYATA--YQNRGVLFGEQGQIENALTDFDI 439

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
           A+    PT + +Y N    +  KG+ +KA   Y  ++K +N  ++    YY  G +  + 
Sbjct: 440 AIK-LNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIK-LNPNYDI--AYYTRGLIFKQQ 495

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G+   AL +F+K +++  +        G +Y + G+IEKA +    A K++P    A+ +
Sbjct: 496 GEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLNPNYDTAYQN 555

Query: 371 LGELLISSDTGAALDAFKTARTLLK------KAGEEVPIEVLNNIGVIHFEKGEFESAHQ 424
            G  ++    G    AF+     +K       A +    +  +  GV++ ++GE E A Q
Sbjct: 556 RG--VLYKQQGEKEKAFQDYNMAIKLNPNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQ 613

Query: 425 SFKDAL-----------GDGIWLTLLDSKTKTYVIDASASMLQ------FKDMQLFHRFE 467
            +  A+             G+       K K       A  L       + +  + +  +
Sbjct: 614 DYHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQ 673

Query: 468 NDGNHVELPWNKV--------TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 519
            +       +NK            +N   L ++  +   A   Y +++F   +  DAY+ 
Sbjct: 674 GEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYNIVIFLNPNDADAYIN 733

Query: 520 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
             A+       + +++  N+A+K+N  Y  A    G L  +N +  KA + +  A
Sbjct: 734 RGALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGEKEKALQDYNMA 788



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 91/405 (22%), Positives = 180/405 (44%), Gaps = 35/405 (8%)

Query: 35  YERIAILNA-LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 93
           Y +  ILN    + Y   G +  ++ EKE+    A + YN A +++ +    +  +G L 
Sbjct: 29  YNKAIILNPKSAIAYYNRGILFCEKGEKEK----ALKDYNMAIKLNPNYDIAYYNRGVLF 84

Query: 94  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
             +GE ++A   +  V++ + +N  A + +  +    G +  +L+ Y  A++++P+   A
Sbjct: 85  GEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLNPNDADA 144

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 213
               +G      GQ  KA Q F  A++L+P +  A     V+  Q  E           +
Sbjct: 145 FN-NLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQKGEK----------E 193

Query: 214 RAFEIYPYCAMALNYLANHF-FFTGQHFLVEQLTETALAVTNH------GPTKSHSYYNL 266
           +A E +    MA+ + +N+   +  +  L +Q  E   A+ ++       P  + +YYN 
Sbjct: 194 KALEDFN---MAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNR 250

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
              +  KG+ +KA   +  ++K       +I  Y   G +  + G+   AL ++   +++
Sbjct: 251 GVVFKQKGEKQKALEDFNMAIKF---DSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKL 307

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALD 385
             +  +     G ++ QLG+ +KA +   +A +++P+ A  + + G L     +   AL 
Sbjct: 308 NRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQ 367

Query: 386 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            FK    L              N GV++ E+GE E+A + F  A+
Sbjct: 368 DFKNVIRLNPNYA-----TAYQNRGVLYGEQGEIENALKDFDMAI 407



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 20/303 (6%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  + +YYN    +  KG+ EKA   Y  ++K +N  ++    YY  G +  + G+   A
Sbjct: 37  PKSAIAYYNRGILFCEKGEKEKALKDYNMAIK-LNPNYDI--AYYNRGVLFGEQGEKDKA 93

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           + ++  V+++  +N       G ++ QLG+ EKA +    A K++P DA AF +LG LL 
Sbjct: 94  IQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLNPNDADAFNNLGNLL- 152

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 436
             D G    A +   T +K    +       N GV+  +KGE E A + F  A+      
Sbjct: 153 -DDQGQKDKALQNFNTAIKLNPNDAT--AYYNRGVVFKQKGEKEKALEDFNMAI------ 203

Query: 437 TLLDSKTKTYVIDASASM-LQFKDMQLFHRFENDGN-HVELPWNKVTVLFNLARLLEQIH 494
                K  +  IDA  +  + FK      +  +D N  ++L  N  T  +N   + +Q  
Sbjct: 204 -----KFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNRGVVFKQKG 258

Query: 495 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 554
           +   A   + + +    +Y+DAY+    + K +   + +++  N A+K+N  Y +A    
Sbjct: 259 EKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINR 318

Query: 555 GDL 557
           G L
Sbjct: 319 GVL 321



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/325 (21%), Positives = 140/325 (43%), Gaps = 48/325 (14%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LG +   Q +K++    A Q +N A +++ ++ + +  +G +   KGE E+A   F + +
Sbjct: 148 LGNLLDDQGQKDK----ALQNFNTAIKLNPNDATAYYNRGVVFKQKGEKEKALEDFNMAI 203

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           + D + + A + +  +   +G    +L  Y  A++++P+   A     G+   + G+  K
Sbjct: 204 KFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAY-YNRGVVFKQKGEKQK 262

Query: 171 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
           A + F  A++ D   ++A +   V+  Q  E     K ++    A ++    A A     
Sbjct: 263 ALEDFNMAIKFDSNYIDAYINRGVLFKQQGEK---EKALKDYNTAIKLNRNYADA----- 314

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
               +  +  L +QL ET  A+                      DY +A          I
Sbjct: 315 ----YINRGVLFKQLGETKKALQ---------------------DYNQA----------I 339

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
               ++   YY  G +  +LG+ + AL +F+ V+ + P+     +  G +Y + G+IE A
Sbjct: 340 RLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENA 399

Query: 351 QELLRKAAKIDPRDAQAFIDLGELL 375
            +    A K++P  A A+ + G L 
Sbjct: 400 LKDFDMAIKLNPNYATAYQNRGVLF 424


>gi|392373589|ref|YP_003205422.1| TPR domain-containing protein [Candidatus Methylomirabilis oxyfera]
 gi|258591282|emb|CBE67579.1| putative TPR domain protein [Candidatus Methylomirabilis oxyfera]
          Length = 585

 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 165/391 (42%), Gaps = 35/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGK---GQLLLAKGEVEQASS 104
           Y  L  +  + R+ +E    A   Y +A  +D   P + V +   G+L L +G+ EQAS 
Sbjct: 160 YVQLAALYREARKAQE----AIAVYRQALDVD---PGSLVIRYNLGRLYLEEGQSEQASH 212

Query: 105 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
            F+ +LE D    PAL         +G+  ++   Y+RAL   P   G IR  +     +
Sbjct: 213 IFREILERDSAFDPALTALGMSLEAQGKLDEARTMYQRALVDDPRN-GEIRERLAQLLLR 271

Query: 165 LGQLGKARQAFQRALQLDPENVEALVALAVM----DLQANEAAGIRKGMEKMQRAFEIYP 220
             +L  A   ++R L  +P N    + +  +     +        R  + +     E+  
Sbjct: 272 QKELDAALIEYRRLLDQEPNNSSFKLRIGFIYYEKRMYGEAIQAFRDILREESGNHEVRY 331

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 280
           Y  + L     H          E L E A  +    P    + ++       K  Y +AG
Sbjct: 332 YLGLTLEDERRH---------DEALDELA-QIPKDSPRYPDALFHRGYILSQKERYVEAG 381

Query: 281 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
              + S+    +P+E + PY  LG +  +   +  A+   E+ L + P N   L  LG  
Sbjct: 382 --DLLSIAGSLRPNEGVIPYL-LGLIYFQQKSYPQAIAQLERALGLEPSNAAYLYQLGSA 438

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 400
           + +  QI+KA+ + R+   +DP+ A A+  LG +   +D G  LD    +  L+KKA E 
Sbjct: 439 FERSRQIDKAETIFRRLLTVDPKHADAYNYLGYMF--ADEGIKLD---ESVALVKKALEL 493

Query: 401 VPIE--VLNNIGVIHFEKGEFESAHQSFKDA 429
            P     ++++G  +++KG  + A    K A
Sbjct: 494 QPDNGAFVDSLGWAYYKKGMVDEALVELKRA 524



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 9/175 (5%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P ++ +Y  LA  Y      ++A   Y  ++     P   +  Y  LG++ L+ G    A
Sbjct: 154 PVRTETYVQLAALYREARKAQEAIAVYRQALD--VDPGSLVIRY-NLGRLYLEEGQSEQA 210

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              F ++LE        L ALG      G++++A+ + ++A   DPR+ +    L +LL+
Sbjct: 211 SHIFREILERDSAFDPALTALGMSLEAQGKLDEARTMYQRALVDDPRNGEIRERLAQLLL 270

Query: 377 -SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              +  AAL  +   R LL +       ++   IG I++EK  +  A Q+F+D L
Sbjct: 271 RQKELDAALIEY---RRLLDQEPNNSSFKL--RIGFIYYEKRMYGEAIQAFRDIL 320


>gi|159906168|ref|YP_001549830.1| hypothetical protein MmarC6_1787 [Methanococcus maripaludis C6]
 gi|159887661|gb|ABX02598.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
          Length = 543

 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 143/328 (43%), Gaps = 14/328 (4%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           + + Y+KA + +      W  KG  L   G  E+A   +   +E D +++ +   +    
Sbjct: 222 SIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSNDIDSWNNKGLAL 281

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           ++ GRY +++  Y RAL++  +   + +   GL    L +  +A   + + L+L+PE+ +
Sbjct: 282 YDLGRYEEAIVCYDRALELDSNYSDS-QYNKGLALQYLERYDEAIVCYDKTLELNPEDTD 340

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           +     +     +E     + +E   ++ E+ P     L    N  +  G++    Q   
Sbjct: 341 SWCNKGI---SLHEVGRYEEAIECYDKSLELNPEDVDILYNKGNSLYDLGRYEEAVQFYN 397

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQV 306
            AL +     + S +++N   + H  G YE+A G Y  A     N    +       G  
Sbjct: 398 NALNIN---SSCSDAWHNKGLALHDLGKYEEAIGCYNRAIELGPNNSDSWN----NKGNS 450

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
              LG +  A+  ++K LE+ P+  +T    G    +LG+ E+A E   +A +++P D +
Sbjct: 451 LYDLGRYEEAIECYDKSLELNPNYSDTWYNKGLSLCKLGRYEEAIEYYGRALELNPSDEE 510

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLL 394
           A  +LG+    +   + L+  K    ++
Sbjct: 511 A--ELGKQYAENQLNSGLNILKNVFEMI 536



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 162/371 (43%), Gaps = 20/371 (5%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           E++  + + +N A  +D ++ + W  KG +L       +A   F  VLE D +   A L 
Sbjct: 47  ENYEKSIECFNNALELDPYDKTAWFNKGYILYGIYRSNEALVCFDKVLELDPEAFDAWLY 106

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +    ++   Y  ++E   +AL++ P    A     G   Y L +  ++ + + RAL+L+
Sbjct: 107 KGYTYYDLDNYQKTIECLDKALELDPENLDAYYCE-GDSYYFLERYEESLECYNRALELN 165

Query: 183 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           P     LV    ++  L   E A I        +A +I P  A AL+      +  G++ 
Sbjct: 166 PTYTSLLVDKGTSLHKLGRYEEAII-----CYDKALKIDPNYAYALSNKGLSLYDLGRYE 220

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFP 299
              +  + AL  +N G   S+ +YN   + +  G YE+A G Y  A   + N     I  
Sbjct: 221 ESIECYDKALK-SNSG--YSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSND----IDS 273

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +   G     LG +  A+  +++ LE+  +  ++    G     L + ++A     K  +
Sbjct: 274 WNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLERYDEAIVCYDKTLE 333

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
           ++P D  ++ + G  L   + G   +A +     L+   E+V  ++L N G   ++ G +
Sbjct: 334 LNPEDTDSWCNKGISL--HEVGRYEEAIECYDKSLELNPEDV--DILYNKGNSLYDLGRY 389

Query: 420 ESAHQSFKDAL 430
           E A Q + +AL
Sbjct: 390 EEAVQFYNNAL 400


>gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
 gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
          Length = 412

 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 143/339 (42%), Gaps = 55/339 (16%)

Query: 33  VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 92
           +  E   + N +   Y+ +G+ E            A + Y KA  +    P+ W GK   
Sbjct: 128 INSEDADLWNNMAFSYSQIGEYEK-----------AVEAYGKALDLKPDYPNAWYGKALN 176

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           L   G  E+A  A+ IVL+ + +   A  G+       G Y +++  Y +AL++ P    
Sbjct: 177 LSQAGRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLE 236

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A     G+    LG   +A +A+++A+++DPEN +A   + + DL+          +E+ 
Sbjct: 237 AWYYK-GVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGI-DLE---------NLERY 285

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
             A               N F             E A+ + +     S  +YN   +   
Sbjct: 286 DEAI--------------NAF-------------EKAIEINSE---NSDVWYNKGFTLSQ 315

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
              +++A   Y  +V+      E++  Y  LG V  +L  F  AL  +EK L++ P+  +
Sbjct: 316 VQRFDEAVEAYRKAVQ---LDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAAD 372

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           +          LG+ E+A++  RKA +IDPR A+   D+
Sbjct: 373 SWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEIGGDI 411



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 48/304 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y +A +I+  +   W          GE E+A  A+   L+   D   A  G+A   
Sbjct: 118 ALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNL 177

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GRY ++++ Y   L+ + +   A   G G+   ++G   +A  A+ +AL++DPE +E
Sbjct: 178 SQAGRYEEAVDAYDIVLKENSNYKEAWA-GKGIALGQMGNYDEAIIAYDKALEIDPEFLE 236

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A     V DL +      ++ ++  ++A EI P                          E
Sbjct: 237 AWYYKGV-DLDS--LGSFKQALKAYEKAVEIDP--------------------------E 267

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG--LGQ 305
              A  N G        NL R   +   +EKA         EIN  +  ++   G  L Q
Sbjct: 268 NDDAWNNMGIDLE----NLERYDEAINAFEKA--------IEINSENSDVWYNKGFTLSQ 315

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
           VQ     F  A+  + K +++ P+  E   +LG +  QL + E+A ++  KA K+DP  A
Sbjct: 316 VQR----FDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAA 371

Query: 366 QAFI 369
            ++ 
Sbjct: 372 DSWF 375



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 21/220 (9%)

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           GL   +LG+  +A  AF++A+  DP N+  L          N  A   + + + + A ++
Sbjct: 72  GLDLLRLGKYNEAIIAFEKAIDKDPGNIYLL----------NNKAAALESLGRFEEALKL 121

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLARSYHS 272
           Y   A+ +N   +   +    F   Q+ E   AV  +G      P   +++Y  A +   
Sbjct: 122 YQ-EAVKINS-EDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQ 179

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
            G YE+A   Y   +KE +   E    + G G    ++G++  A+  ++K LEI P+  E
Sbjct: 180 AGRYEEAVDAYDIVLKENSNYKE---AWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLE 236

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
                G     LG  ++A +   KA +IDP +  A+ ++G
Sbjct: 237 AWYYKGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMG 276



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 141/315 (44%), Gaps = 30/315 (9%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  LL  G+  +A  AF+  ++ D  N+  L  +A    + GR+ ++L+ Y+ A++++ S
Sbjct: 72  GLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKIN-S 130

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
               +   +     ++G+  KA +A+ +AL L P+   A    A+   QA          
Sbjct: 131 EDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAG--------- 181

Query: 210 EKMQRAFEIYPYCAMALNYLANHF-FFTGQHFLVEQLTETALAVTNH------GPTKSHS 262
            + + A + Y    + L   +N+   + G+   + Q+     A+  +       P    +
Sbjct: 182 -RYEEAVDAYD---IVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEA 237

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           +Y       S G +++A   Y  +V EI+  ++  +   G+    L+   +  A+  FEK
Sbjct: 238 WYYKGVDLDSLGSFKQALKAYEKAV-EIDPENDDAWNNMGIDLENLER--YDEAINAFEK 294

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 382
            +EI  +N +     G    Q+ + ++A E  RKA ++DP   +A+  LG +L      A
Sbjct: 295 AIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVL------A 348

Query: 383 ALDAFKTARTLLKKA 397
            L  F+ A  + +KA
Sbjct: 349 QLKRFEEALDIYEKA 363


>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
 gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 693

 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 146/359 (40%), Gaps = 48/359 (13%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN A  ID      W  KG   L  G  E+A    +  LE + ++  AL+ +A V  +  
Sbjct: 325 YNHALEIDPEFSEAWTNKGATYLTLGRNEEALVCLEKALELNPNDQTALMNKASVLISVE 384

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            Y D++ +  R L++  +   A+ L     +  + +  ++ +  +R   +DP+N EA   
Sbjct: 385 DYDDAILYCDRVLEIDSNQVAALFLK-ARTQQNIAKFDESIETLERITSIDPDNDEAWFL 443

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
           + V     N+       +    +A EI P    A       ++F G+  ++         
Sbjct: 444 IGVSQEYLNKP---EDALVSFNKAIEIEPKNIGA-------WYFKGRSLMM--------- 484

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
                         L R+  +   YE   L           P  +   ++  G + ++ G
Sbjct: 485 --------------LGRADEALKSYEMVTLM---------DPENYE-AFHLTGLINMEQG 520

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           ++  AL NF+ VL I PDN + L   G  Y  + + EKA E   +A  ++  + +A    
Sbjct: 521 NYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNVEALNYR 580

Query: 372 GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           G  L     G    + KT   +L+   E  P    + IG+ + E GE+E A +SF +AL
Sbjct: 581 GVAL--KHMGDHDASIKTFEAVLEMEPEN-PW-AWHQIGLNYKEVGEYEKAIESFDNAL 635



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 111/292 (38%), Gaps = 55/292 (18%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           +GV   YL K E            A   +NKA  I+      W  KG+ L+  G  ++A 
Sbjct: 444 IGVSQEYLNKPED-----------ALVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEAL 492

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
            ++++V   D +N  A      +   +G Y ++L+ +   L + P     + +  G    
Sbjct: 493 KSYEMVTLMDPENYEAFHLTGLINMEQGNYDEALKNFDAVLNISPDNIDVL-INKGQAYG 551

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
            + +  KA + F  AL L+ +NVEAL                               Y  
Sbjct: 552 FMDKPEKALEYFDEALDLESDNVEAL------------------------------NYRG 581

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
           +AL ++ +H          +   +T  AV    P    +++ +  +Y   G+YEKA   +
Sbjct: 582 VALKHMGDH----------DASIKTFEAVLEMEPENPWAWHQIGLNYKEVGEYEKAIESF 631

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
             ++ E  K   F+      G        F+ AL  F+ VL   P N + L+
Sbjct: 632 DNALDEDPK---FLLALLEKGVCLGMNKQFKEALECFDDVLIKDPQNPDALQ 680



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRA 143
           TW  KG  L+  G++ +A   F   L A   N P  L   C+      RY +SLE + +A
Sbjct: 32  TWTRKGMALMGLGKINEAIECFDKSL-AIMPNYPWALDNMCMALLLVERYDESLECFDKA 90

Query: 144 LQVHP 148
           L++HP
Sbjct: 91  LEIHP 95


>gi|147921574|ref|YP_684609.1| hypothetical protein LRC308 [Methanocella arvoryzae MRE50]
 gi|56295578|emb|CAH04820.1| hypothetical protein orf20 [uncultured archaeon]
 gi|110620005|emb|CAJ35283.1| hypothetical protein LRC308 [Methanocella arvoryzae MRE50]
          Length = 423

 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 125/288 (43%), Gaps = 16/288 (5%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G+ +LA G  +QA + F    +   +   A  G       +G Y +S+    RA+ V P 
Sbjct: 104 GKAVLATGNPDQALNLFTASKQLGMNESMACCGIGSALAEKGLYRESIVELSRAIAVDPG 163

Query: 150 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL--QANEAAGIR 206
              A +RLG+  C  + G   +A    ++A++L+P N+EA + LA   L  Q  +AA   
Sbjct: 164 NVEAYVRLGMACC--ETGSYAEAMAWLKKAVELNPGNIEAHLCLARAYLRGQMYDAA--- 218

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
             + +      + P C  A+N     + + G   L++Q  +      +  P    ++ NL
Sbjct: 219 --LAEYDVVLGLRPRCLDAINGKGTVYHYKG---LIDQAIQEYRHAIDLYPGDYRAHNNL 273

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
           A +Y  KG YE+A   Y  ++    K  E    Y   G + L  GD   A   F + L +
Sbjct: 274 ALAYVDKGMYERAIPEYRLAICASPKLPELHADY---GMLLLLTGDTYGATLAFREALRL 330

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            PD+      L     Q GQ   A   L +A ++ P + +AF  LG +
Sbjct: 331 APDSYSGHVNLAVALYQSGQCSDALAELAEAVRLSPSEPEAFFHLGTI 378



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 64/317 (20%), Positives = 127/317 (40%), Gaps = 20/317 (6%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  + ++Y L ++  + G+ ++A   + AS K++           G+G    + G +R +
Sbjct: 94  PGYAEAHYYLGKAVLATGNPDQALNLFTAS-KQLGMNESMAC--CGIGSALAEKGLYRES 150

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           +    + + + P N E    LG    + G   +A   L+KA +++P + +A + L    +
Sbjct: 151 IVELSRAIAVDPGNVEAYVRLGMACCETGSYAEAMAWLKKAVELNPGNIEAHLCLARAYL 210

Query: 377 SSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 435
                 AAL  +     L  +      ++ +N  G ++  KG  + A Q ++ A    I 
Sbjct: 211 RGQMYDAALAEYDVVLGLRPRC-----LDAINGKGTVYHYKGLIDQAIQEYRHA----ID 261

Query: 436 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF-NLARLLEQIH 494
           L   D +    +       L + D  ++ R   +         K+  L  +   LL    
Sbjct: 262 LYPGDYRAHNNL------ALAYVDKGMYERAIPEYRLAICASPKLPELHADYGMLLLLTG 315

Query: 495 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 554
           DT  A++ +R  L    D    ++ LA           ++  + EA++++   P A   L
Sbjct: 316 DTYGATLAFREALRLAPDSYSGHVNLAVALYQSGQCSDALAELAEAVRLSPSEPEAFFHL 375

Query: 555 GDLELKNDDWVKAKETF 571
           G +  +  D VKA   +
Sbjct: 376 GTIHDRCGDPVKAATAY 392


>gi|440682547|ref|YP_007157342.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428679666|gb|AFZ58432.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 1409

 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 150/356 (42%), Gaps = 33/356 (9%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W  KG      G+   A ++F   LE   D     L +    ++ G Y  ++ F+ +AL
Sbjct: 146 VWFNKGYEQYNAGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGEYEQAVAFFDKAL 205

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEA 202
           +  P       +  G   Y LG+  +A  ++ +AL++ P+  EA     +A+ +L   E 
Sbjct: 206 EFKPDYHEVWLIRGGALDY-LGEYEQAVASYDKALEIKPDYHEAWCKRGVALANLGEYEQ 264

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------ 256
           A     +    +A EI P      +Y   H     +  L+  L E   AV +        
Sbjct: 265 A-----VASYDKALEIKP------DY---HEVGNNRGLLLVHLGEYQKAVASFDKALEIK 310

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P    +++    +    G+YE+A   Y  +++   + H+ +  +   G     LG+++ A
Sbjct: 311 PNDYDAWHYRGVALGYLGEYEQAVASYNKALEIKPEYHQALSNW---GVTLGNLGEYQKA 367

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           + +F+K LEI PD+ E     G   V LG+ +KA     KA +I P D  A+ + G +L 
Sbjct: 368 VASFDKALEIKPDDHEAWCKRGVTLVHLGEYQKAVASFDKALEIKPNDYDAWCNRGVVLC 427

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                     ++ A     KA +  P   E  NN GV     GE+E A  S+  AL
Sbjct: 428 DH-----FRQYEQAVASYDKALQIKPDKYEAWNNRGVALGNLGEYEQAVASYDKAL 478



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 144/366 (39%), Gaps = 53/366 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+KA +I   +   W  +G  L   GE EQA +++   L+   D+  A   +    
Sbjct: 436 AVASYDKALQIKPDKYEAWNNRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNRGVTL 495

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
              G Y  ++  Y + L+  P    A    GI LC   LG+  +A  +F +AL++ P+  
Sbjct: 496 GYLGEYEQAVASYDKVLEFKPDYYDAWYNRGILLCD-NLGRYEQAVASFNKALEIKPDYY 554

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
           +A     V      E     + +    +A EI P          +H  +  +   ++ L 
Sbjct: 555 DAWCNRGVALDHLGE---YEQAVASYDKALEIKP---------DDHETWCKRGVTLDHLG 602

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           E   AV ++            ++   K DY KA                    +YG G  
Sbjct: 603 EYEQAVASYD-----------KALKFKPDYHKA--------------------WYGRGVT 631

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
              LG+   A+ ++ K LE  PD  E   + G+    LG+ E+A     KA +I P    
Sbjct: 632 LDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAVASYDKALEIKPDYYD 691

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 424
           A+ + G  L        L  ++ A T   KA E  P   E   N GV+  + GE+E A  
Sbjct: 692 AWCNRGVAL------DHLGEYEQAVTSYDKALEFKPDKYEAWCNRGVVLCDLGEYEQAVA 745

Query: 425 SFKDAL 430
           S+  AL
Sbjct: 746 SYDKAL 751



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 156/375 (41%), Gaps = 36/375 (9%)

Query: 68  ATQYYNKA--SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A  +++KA   + D HE   W+ +G  L   GE EQA +++   LE   D   A   +  
Sbjct: 197 AVAFFDKALEFKPDYHE--VWLIRGGALDYLGEYEQAVASYDKALEIKPDYHEAWCKRGV 254

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
              N G Y  ++  Y +AL++ P     G  R   GL    LG+  KA  +F +AL++ P
Sbjct: 255 ALANLGEYEQAVASYDKALEIKPDYHEVGNNR---GLLLVHLGEYQKAVASFDKALEIKP 311

Query: 184 ENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            + +A     VAL  +           + +    +A EI P    AL+         G++
Sbjct: 312 NDYDAWHYRGVALGYL-------GEYEQAVASYNKALEIKPEYHQALSNWGVTLGNLGEY 364

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
                  + AL +    P    ++     +    G+Y+KA   +  ++ EI KP+++   
Sbjct: 365 QKAVASFDKALEIK---PDDHEAWCKRGVTLVHLGEYQKAVASFDKAL-EI-KPNDYD-A 418

Query: 300 YYGLGQVQL-KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
           +   G V       +  A+ +++K L+I PD  E     G     LG+ E+A     KA 
Sbjct: 419 WCNRGVVLCDHFRQYEQAVASYDKALQIKPDKYEAWNNRGVALGNLGEYEQAVASYDKAL 478

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEK 416
           KI P D QA  + G  L        L  ++ A     K  E  P   +   N G++  + 
Sbjct: 479 KIKPDDYQACFNRGVTL------GYLGEYEQAVASYDKVLEFKPDYYDAWYNRGILLCDN 532

Query: 417 -GEFESAHQSFKDAL 430
            G +E A  SF  AL
Sbjct: 533 LGRYEQAVASFNKAL 547


>gi|296127341|ref|YP_003634593.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 750

 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 147/689 (21%), Positives = 264/689 (38%), Gaps = 119/689 (17%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
            E K  EK   +I    +YN  S    H  +  + K  L L +G ++    A ++     
Sbjct: 19  FENKDYEKAIEYIDKVIFYNGDSYDLYH--NRGLAKLNLRLYEGAIKDFDRAIEL----- 71

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-IGLCRYKLGQLGKAR 172
             +  +   +   +F    Y +++E + + +++  S   +     IGLC+Y L +  +A 
Sbjct: 72  -GDYNSYYERGLAKFYMAFYKEAIEDFNKVVELDKSSAASFAYNTIGLCKYNLNEFDEAL 130

Query: 173 QAFQRALQLDPENVEALVALAV----MDLQANEAAGIRKGME----KMQRAFEIYPY-CA 223
           + + +A++ +P  + A   +A+    M L     + + K +E     ++   +IY     
Sbjct: 131 KYYNKAIETNPNLIIAYHNIALLKHSMGLDDEALSYLNKALEIDTNNIETYLKIYSIKLG 190

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
           + L   AN +        ++++ E         P   + Y  +       G Y +  L Y
Sbjct: 191 LGLEREANEY--------LDKIMEMY-------PDDLYIYDRIGNIKIDAG-YMEESLEY 234

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
           +    EIN P+ FI  YY +     KL     AL+  EK L+I P+N +T   +  I   
Sbjct: 235 LKKALEIN-PN-FIDAYYDIAFALHKLNLNDEALSYLEKALQISPNNADTYFKIFLIKRA 292

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA--GEEV 401
           LG  + A   L K  +ID  D   + ++  + I       L+ ++ A   L KA   +  
Sbjct: 293 LGDYDGALSCLEKILEIDDTDVAIYNEIALIKIE------LELYEEALYYLNKALCIDNN 346

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 461
             E+ N IG+++  K  +E A ++F  AL                  + + SM    DM 
Sbjct: 347 NAEIYNTIGLVYHYKRNYEEAIKNFNKAL------------------ELNTSM----DM- 383

Query: 462 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 521
                                 +N+     ++HD   A   Y   L     Y  AY+ L 
Sbjct: 384 --------------------AYYNIGLSYYEMHDYEKAIEYYNKALEINTQYSAAYINLG 423

Query: 522 AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK 581
            I     N Q +I     AL++N  Y  +   +   E+  +D+ KA E F  A       
Sbjct: 424 LIEHNFGNYQEAINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFNHA------- 476

Query: 582 DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 641
                L LG +N      N       EA + +KA E Y +V+  + + + A       L+
Sbjct: 477 -----LELG-YNEADIYTNIGLIYSREAIY-DKAIEYYNKVLEINPNKVNAYYNIAFCLS 529

Query: 642 EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 701
              ++  + +++ +V     G+              VY+ +G     +  Y+  +R F  
Sbjct: 530 NMDKYKEALEIYDKVIRMYPGNF------------DVYYERGYTKYRVSKYEEAIRDF-- 575

Query: 702 NTDAQILLYLARTHYEAEQWQDCKKSLLR 730
                I++ +   HY A  ++ C K  L+
Sbjct: 576 ----DIIINVNSKHYNAYYYRGCSKKYLK 600



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 131/330 (39%), Gaps = 21/330 (6%)

Query: 40  ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 99
           I N +G+ Y Y       +R  EE    A + +NKA  ++      +   G       + 
Sbjct: 350 IYNTIGLVYHY-------KRNYEE----AIKNFNKALELNTSMDMAYYNIGLSYYEMHDY 398

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
           E+A   +   LE +     A +    +E N G Y +++ +YKRAL+++P+   +    I 
Sbjct: 399 EKAIEYYNKALEINTQYSAAYINLGLIEHNFGNYQEAINYYKRALEINPNYSLS-YYNIA 457

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
           L    L    KA + F  AL+L     +    + ++    +  A   K +E   +  EI 
Sbjct: 458 LAEMSLEDYDKALEDFNHALELGYNEADIYTNIGLI---YSREAIYDKAIEYYNKVLEIN 514

Query: 220 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           P     +N   N  F        ++  E    V    P     YY    + +    YE+A
Sbjct: 515 P---NKVNAYYNIAFCLSNMDKYKEALEIYDKVIRMYPGNFDVYYERGYTKYRVSKYEEA 571

Query: 280 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
            +     +  +N  H   + Y G  +  LK  ++  A+ +F+K +E  P+N +       
Sbjct: 572 -IRDFDIIINVNSKHYNAYYYRGCSKKYLK--NYDEAIKDFDKAIEYNPNNPDYYSEKAS 628

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
            Y  L +  ++ E   KA +++  D   +I
Sbjct: 629 CYDYLNKYRESIENYDKAIELNDNDWFLYI 658


>gi|410678947|ref|YP_006931349.1| hypothetical protein BafHLJ01_0200 [Borrelia afzelii HLJ01]
 gi|408536335|gb|AFU74466.1| hypothetical protein BafHLJ01_0200 [Borrelia afzelii HLJ01]
          Length = 379

 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSNILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLIKHPNNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAS--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAIFGLADCYRGNKEYKEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E    N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDLKNNLVLTRVGDAYRYLNDYENAQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|403371722|gb|EJY85745.1| TPR Domain containing protein [Oxytricha trifallax]
          Length = 1558

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 116/287 (40%), Gaps = 48/287 (16%)

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            G L L +   E+A+   K  +  ++    AL+    + F  G+ SDSL++YK AL  +  
Sbjct: 1275 GMLYLEQQNYEKAAEMLKQAITVNKQYGVALVTMGNLLFETGQSSDSLKYYKHALAQNEK 1334

Query: 150  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
               A+ +G+G   Y L  + +A   +QR L++D +           D+  N         
Sbjct: 1335 DVQAL-IGLGNAHYDLKNMKRAIGFYQRVLEIDQKQA---------DVHYN--------- 1375

Query: 210  EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
                               L N  F +G+   VEQ            P KS +YYNL  +
Sbjct: 1376 -------------------LGNALFLSGE---VEQSVVHYQKAIEQNPQKSEAYYNLGNA 1413

Query: 270  YHSKGDYEKAGLYYMASV--KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
               K DY +A   Y  ++     N P       Y +G      G  R A+  + K +EI 
Sbjct: 1414 LCGKSDYIQAVDAYQKTLDLSPQNGP-----ALYNMGNAYYMQGKTREAIDTYSKAIEIN 1468

Query: 328  PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
              + ET   +   Y  +G+I+ A +  +KA  +DP ++  +  L ++
Sbjct: 1469 DKSAETFFNIASAYNDVGEIDHAIKHYQKAIDLDPENSDTYFCLAQI 1515



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 151/348 (43%), Gaps = 75/348 (21%)

Query: 132  RYSDSLEFYKRALQVH-------PSCPGAI--RLGIGLCRYKLGQLGKARQAFQRALQLD 182
            ++ D++  Y+R+LQ++       P   G I  RLG    R ++  LGK  Q   +A Q  
Sbjct: 1012 KFEDAILSYQRSLQLYENEDDQEPQLLGNIQFRLGWAYIRSRMN-LGKGIQYLTQAQQNI 1070

Query: 183  PENVEALVALA-------------------VMDLQA-NEAAGIRKG--MEKMQRAFEIYP 220
            P N+E  + LA                    +++QA N  + + KG  +++++R  E   
Sbjct: 1071 PNNLEINIKLAGVLFREENKYAEALEYINKALEIQADNIDSQLLKGKILDRLERHLE--- 1127

Query: 221  YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 280
              A   N +        +    +++++    +TN     ++S + L ++Y    DY+K  
Sbjct: 1128 -AAEVFNKVLEQQQTQQKMQQEQKISQDQSQITNQ--MVANSVFYLGQTYERMKDYKKCA 1184

Query: 281  LYY--------------------MASVKE-----------INKPHEFIFPYYGLGQV--Q 307
              Y                    +AS+ E           + +  E I   YG+ +   Q
Sbjct: 1185 ALYKKCLTIDSKNLGACVHLANLLASIGEGERALKYFKHALKQEPESISVNYGIAKTIQQ 1244

Query: 308  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             +  + + A+T++E ++   PD+  +L  LG +Y++    EKA E+L++A  ++ +   A
Sbjct: 1245 FQPQNKQQAITHYEFIIGKEPDHFRSLTQLGMLYLEQQNYEKAAEMLKQAITVNKQYGVA 1304

Query: 368  FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 415
             + +G LL   +TG + D+ K  +  L  A  E  ++ L  +G  H++
Sbjct: 1305 LVTMGNLLF--ETGQSSDSLKYYKHAL--AQNEKDVQALIGLGNAHYD 1348



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/306 (20%), Positives = 133/306 (43%), Gaps = 40/306 (13%)

Query: 100  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            ++ ++ +K  L  D  N+ A +  A +  + G    +L+++K AL+  P    ++  GI 
Sbjct: 1181 KKCAALYKKCLTIDSKNLGACVHLANLLASIGEGERALKYFKHALKQEPESI-SVNYGIA 1239

Query: 160  --LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
              + +++     +A   ++  +  +P++  +L  L ++ L   E     K  E +++A  
Sbjct: 1240 KTIQQFQPQNKQQAITHYEFIIGKEPDHFRSLTQLGMLYL---EQQNYEKAAEMLKQAIT 1296

Query: 218  IYPYCAMALNYLANHFFFTGQ---------HFLV--EQLTETALAVTN-HGPTKSHS--- 262
            +     +AL  + N  F TGQ         H L   E+  +  + + N H   K+     
Sbjct: 1297 VNKQYGVALVTMGNLLFETGQSSDSLKYYKHALAQNEKDVQALIGLGNAHYDLKNMKRAI 1356

Query: 263  ----------------YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
                            +YNL  +    G+ E++ ++Y  ++++  +  E    YY LG  
Sbjct: 1357 GFYQRVLEIDQKQADVHYNLGNALFLSGEVEQSVVHYQKAIEQNPQKSE---AYYNLGNA 1413

Query: 307  QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
                 D+  A+  ++K L++ P N   L  +G+ Y   G+  +A +   KA +I+ + A+
Sbjct: 1414 LCGKSDYIQAVDAYQKTLDLSPQNGPALYNMGNAYYMQGKTREAIDTYSKAIEINDKSAE 1473

Query: 367  AFIDLG 372
             F ++ 
Sbjct: 1474 TFFNIA 1479



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 62/313 (19%), Positives = 134/313 (42%), Gaps = 47/313 (15%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC-RYKLG-------QLG-KARQAFQRA 178
           F   +++++ + YK  L + P+   A+   +G C R++         QL  K  + +QRA
Sbjct: 58  FKERKFTEAEQLYKEILDIDPTSVEALN-SLGNCIRFQSNINPDLKVQLNDKLLEIYQRA 116

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           L +DPE++EA   + ++ LQ N+   ++K ++   ++ E       + N          +
Sbjct: 117 LLIDPEDIEANFNMGLLHLQ-NKNQDLQKALQFFLKSIEHDVTIKQSPNKDVKKLQQINK 175

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
            F   Q   T++A             NL  SY ++             ++++ +P +F  
Sbjct: 176 SFDNSQSNPTSIA-----------QQNLQISYQNQ-------------IQDLFRP-QFAK 210

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            Y+ +G +  +LG    A   ++K ++ +     TL  + +         ++Q L    +
Sbjct: 211 AYFNIGMIYDRLGQIPLASKYYKKCIQKFEALPNTLDNVAN-----NNNSESQRLSLMKS 265

Query: 359 KIDPRDAQAF-IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
            I  +    F + L ++   S++   L+  +      +  GE   + ++NN+G++    G
Sbjct: 266 PIYIKAITNFAVTLEKIGKRSESIKLLEQLQQVNN--QTQGE---VRIMNNLGILEKRSG 320

Query: 418 EFESAHQSFKDAL 430
             + A + F++AL
Sbjct: 321 NNDKAQKYFQNAL 333


>gi|300120392|emb|CBK19946.2| unnamed protein product [Blastocystis hominis]
          Length = 429

 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 3/129 (2%)

Query: 110 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
           L+ DR  + + +  A        Y+ ++  Y+ AL  HP  P ++R+GI  C YK     
Sbjct: 161 LDRDRSCLLSSIAAAFYFIQSRDYAKAINAYQMALLYHPDAPASVRVGIAYCFYKQNNYK 220

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQANEAAG---IRKGMEKMQRAFEIYPYCAMAL 226
           KA  A  RALQLDP N EAL   A +   A + +    +   ++ +Q+ + + P    AL
Sbjct: 221 KAFLALDRALQLDPANEEALAMKAALQRTAADLSPKERVIASLQTIQQLYRVNPNHPQAL 280

Query: 227 NYLANHFFF 235
           NY+A+H F+
Sbjct: 281 NYIADHTFW 289


>gi|195941926|ref|ZP_03087308.1| cell division control protein 27, putative [Borrelia burgdorferi
           80a]
          Length = 379

 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 148/354 (41%), Gaps = 52/354 (14%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +     
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRV----- 132

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
               AA  RK ++  Q++                               +T L V    P
Sbjct: 133 ----AASYRK-LKNFQKS------------------------------KQTYLKVMELMP 157

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
              ++   +   Y+   +Y++A L Y   + E+N+    +     +G    KL +F   +
Sbjct: 158 DNDYALVGIGHLYYDFKEYKEA-LKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGI 216

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             F+K LEI P N   +  L   Y    + ++A +      + DP++      +G     
Sbjct: 217 CFFKKALEISPSNFYAVFGLADCYRGNKEYKEALKYWLDIIEKDPKNNLVLTRVG----- 271

Query: 378 SDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            D    L+ ++ ++   KKA + +  +  +  + +I  E+G++E A  + K  +
Sbjct: 272 -DAYRYLNDYENSQIYYKKALDVDFDMFAILGLALIQKEQGKYEEALIAIKSLI 324


>gi|110596792|ref|ZP_01385082.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
 gi|110341479|gb|EAT59939.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
          Length = 466

 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 159/410 (38%), Gaps = 60/410 (14%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           I  +   TW   G  L   G  E+A  AF+  +     +    L  A   FN G   ++L
Sbjct: 64  ITPYNTETWFHLGNCLTLNGSFEEALEAFQKAVVLSPSDSEMALNLALAWFNTGHLDEAL 123

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA---- 193
           E  ++ + +  S         G+   +L +  +A + F+RAL+LD E  +A   LA    
Sbjct: 124 EELEKMI-IDSSIEKEYHYYRGIVLQRLERFVEAEEDFERALELDAEFSDAWYELAYCKD 182

Query: 194 VMDLQANEAAGIRKGME-----------------KMQRAFEIYPYCAMALNYL------- 229
           ++       +  RK ++                 KM+R  E      M+L          
Sbjct: 183 ILGKLEESTSCYRKTLDQDPYNINAWYNNGLVLSKMKRYDEALDSYDMSLAISEDFSSAW 242

Query: 230 ---ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
              AN    TG+   +E+  E+ +      P   ++ YNL  +Y    DY +A   Y   
Sbjct: 243 YNRANVLAITGR---IEEAAESYIKTLEQEPDDINALYNLGIAYEELEDYSEAVHCYRRC 299

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
           + EIN   EF   ++ L      L ++  A++  ++ L   P++ E L     I   L  
Sbjct: 300 I-EINS--EFTDAWFALACCHEALEEYEEAISAIDQALTALPESIEFLLLKAEIEYNLND 356

Query: 347 IEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEV 405
           +E +    R+   IDP   Q ++D   +L  + D  A++DA + +  L   + E      
Sbjct: 357 LENSISTYREIIMIDPESPQIWVDFAMVLREAGDVNASIDALQQSLKLQPFSAE------ 410

Query: 406 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 455
                        FE A   F  A+GD   L+ L + +K + ID    +L
Sbjct: 411 -----------AHFEIAAAYF--AMGDK--LSTLKALSKAFKIDPDKKLL 445



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 40/219 (18%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE 111
           G + +K +  +E    A   Y+ +  I     S W  +  +L   G +E+A+ ++   LE
Sbjct: 212 GLVLSKMKRYDE----ALDSYDMSLAISEDFSSAWYNRANVLAITGRIEEAAESYIKTLE 267

Query: 112 ADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
            + D++ AL  LG A  E     YS+++  Y+R ++++     A    +  C   L +  
Sbjct: 268 QEPDDINALYNLGIAYEELED--YSEAVHCYRRCIEINSEFTDA-WFALACCHEALEEYE 324

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQAN----------------------------- 200
           +A  A  +AL   PE++E L+  A ++   N                             
Sbjct: 325 EAISAIDQALTALPESIEFLLLKAEIEYNLNDLENSISTYREIIMIDPESPQIWVDFAMV 384

Query: 201 --EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 237
             EA  +   ++ +Q++ ++ P+ A A   +A  +F  G
Sbjct: 385 LREAGDVNASIDALQQSLKLQPFSAEAHFEIAAAYFAMG 423



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 4/161 (2%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           E+ E +  A   Y +   I+      W        A  E E+A SA    L A  +++  
Sbjct: 284 EELEDYSEAVHCYRRCIEINSEFTDAWFALACCHEALEEYEEAISAIDQALTALPESIEF 343

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           LL +A +E+N     +S+  Y+  + + P  P  I +   +   + G +  +  A Q++L
Sbjct: 344 LLLKAEIEYNLNDLENSISTYREIIMIDPESP-QIWVDFAMVLREAGDVNASIDALQQSL 402

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
           +L P + EA   +A       +     K + K   AF+I P
Sbjct: 403 KLQPFSAEAHFEIAAAYFAMGDKLSTLKALSK---AFKIDP 440



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 10/180 (5%)

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
           Q NE   + + +   +R  EI PY      +L N     G     E+  E         P
Sbjct: 44  QYNEDGFVIEALAVARRLEEITPYNTETWFHLGNCLTLNGS---FEEALEAFQKAVVLSP 100

Query: 258 TKSHSYYNLARSYHSKGDYEKA--GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
           + S    NLA ++ + G  ++A   L  M     I K +     +Y  G V  +L  F  
Sbjct: 101 SDSEMALNLALAWFNTGHLDEALEELEKMIIDSSIEKEY-----HYYRGIVLQRLERFVE 155

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           A  +FE+ LE+  +  +    L +    LG++E++    RK    DP +  A+ + G +L
Sbjct: 156 AEEDFERALELDAEFSDAWYELAYCKDILGKLEESTSCYRKTLDQDPYNINAWYNNGLVL 215


>gi|118395435|ref|XP_001030067.1| SLEI family protein [Tetrahymena thermophila]
 gi|89284355|gb|EAR82404.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2406

 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 179/860 (20%), Positives = 332/860 (38%), Gaps = 174/860 (20%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y K   +D ++    +  G L L K + E+A   ++ +L  D     A      V F + 
Sbjct: 926  YKKVLELDPNDIDAHILLGSLYLNKPDYEKALECYQNILNIDSKQAVAYNNMGLVYFRQN 985

Query: 132  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
                +LE++ +AL+V+P    +I    GL   K  Q  KA + + + L ++P   + L  
Sbjct: 986  IDDQALEYFNKALEVNPKYELSI-YNSGLVYEKKNQKDKALELYNQVLAINPTEKKTLAR 1044

Query: 192  LAV-------------------------------------------MDL---QANEAAGI 205
            + +                                           +DL   QA E  G+
Sbjct: 1045 MEILKKKEQEQEQKLETAKDYLDQGFKYYNQMKDEESINCYKKALELDLNYFQAYEKLGL 1104

Query: 206  --------RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
                     + +E  ++A EI P C  A+  + N        +L +++ + A       P
Sbjct: 1105 LHKTNKKFDEAVENYKKAIEINPKCFSAMKAVMN-------LYLDKKMIKEAQEFCEFVP 1157

Query: 258  TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
              + +YY L R+Y  +   + A + Y  ++ +++  H  I  Y  LG   L    F  AL
Sbjct: 1158 KCTEAYYELGRTYEEQNMLDDAIVNYKKAI-QLDPSH--INSYIYLGNSYLDKLQFDLAL 1214

Query: 318  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +++K++EI P        +G +Y + G  + A E  +KA  +DP    A  + G  L+ 
Sbjct: 1215 DSYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAALEYYKKALDVDPHYELALFNSG--LVY 1272

Query: 378  SDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDALGDGIW 435
               G        A     K  E  P E   LN I VI   K       Q+ KD     ++
Sbjct: 1273 EKKGEQ----DKALEFFYKTLEINPTEKKSLNRIKVIQQNK-------QTSKDDKEFSLF 1321

Query: 436  LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL-------------PWNKVTV 482
              L  +  K   + ++A    ++ + ++++ +ND   +E               ++K+ +
Sbjct: 1322 KDLFKNDKKK--VLSTADDYYYEGL-VYYQQQNDDKAIECLKKALELDPNFYEAYDKLGL 1378

Query: 483  LFNLARLLEQ--IH---------------DTVAASVLYRLILFKYQDY-------VDAYL 518
            ++ + ++ ++  IH               +TV    L + ++ + +++       +D Y 
Sbjct: 1379 VYKVKKMFDESIIHYKKALELNPKFYSAMETVMNMYLDKKMIKEAKEFSEQVPKNLDTYY 1438

Query: 519  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 578
            +LA + + +N L  SI    + L+ + KY NA   LG+  L    + +A E ++   +  
Sbjct: 1439 KLAKVYQDQNMLDESIVYYKKVLEQDSKYINAYIQLGNAYLDKPLYDQAMECYQKIIE-I 1497

Query: 579  DGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGV 638
            D   S A  ++G       LR            L++A E + + I      + +   +G+
Sbjct: 1498 DSTKSVAYNNIG----LIYLRQ---------NMLDEALEQFNKAIEIDPKYVLSIYNSGL 1544

Query: 639  VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH--VYFAQGNFALAMKMYQNCL 696
            V  +K Q D + + + +  E              IN AH   Y        + K  Q   
Sbjct: 1545 VYEKKQQKDKALECYNKALE--------------INPAHKNSYNRISVLKKSGKQAQETD 1590

Query: 697  RKFYYNTDAQILLYLARTHYEAEQWQ--------DCKKSLLRAIHLAPSNYTLRFDAGVA 748
            ++       +I L  A+ +YE E ++        +  K L +AI L P NY   +D    
Sbjct: 1591 KE----EQQEINLQTAKDYYE-EGYKYYTELNDDESIKCLNKAIELDP-NYFEAYDK--- 1641

Query: 749  MQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCK 808
                    L++ R+  + ++S    +E   + F+ + A  N +L   D K IN   E+  
Sbjct: 1642 ----LGLVLKENRKYEEAIQSYKKAIEVNPKCFAAMQAVMNYYL---DSKMINEAKEFYD 1694

Query: 809  HLLDAAKIHREAAEREEQQN 828
            ++   A+ H       + QN
Sbjct: 1695 YVPKCAETHYHLGRVYQDQN 1714



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 123/647 (19%), Positives = 260/647 (40%), Gaps = 108/647 (16%)

Query: 80  MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEF 139
           M +  T   K      +  +++A   +K VLE D  NV AL     +  ++ +  +SLEF
Sbjct: 1   MEDTETLFNKALDFQKQNLIDEAIECYKKVLEVDYSNVEALYNLGLIYQSKKQLDESLEF 60

Query: 140 YKRALQVHPSCPGAIRLGIGLCR----YKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
             +A++ +P+   A      +C+     +   + +A    Q+AL++DP++ +A   L   
Sbjct: 61  LNKAVEKNPNYINAY-----ICKAENYLQKKMIEEAVVCLQKALEIDPKSAKAHERLGFA 115

Query: 196 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
             + N      K ++ +++A EI P    A + L   F +  +  +++Q  +    + N 
Sbjct: 116 YKKQNLT---DKAIDCLKKAIEIDPNFTEAHHNLG--FTYESKK-MIDQAYDCYKNILNI 169

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
            P    +Y +LAR+Y+                                  ++ K  D   
Sbjct: 170 DPNYVKAYISLARNYY----------------------------------IEYKTED--- 192

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           ++   +K +E+  +  E  + LG+IY  + + E++ +  +KA +IDP    A  +LG L 
Sbjct: 193 SIKYLKKAIEMDQNCVEAYERLGYIYQNISKKEESIKYFKKAIEIDPNYFNAQFNLGLLY 252

Query: 376 ISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
                   AL  F+ A  +  K+ +       NNIG++++ K     A + FK AL    
Sbjct: 253 YQEQKDNEALTYFQKAIEINPKSSDSY-----NNIGLVYYHKDMITEALEYFKKAL---- 303

Query: 435 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL-LEQI 493
                D     Y    ++ +   K   + +  E+    +E+    +  L NL  L ++Q 
Sbjct: 304 -----DVNPLYYKAHHNSGLAYAKQNLIQNAIESYKKSIEINPKFLKSLTNLGDLCVKQN 358

Query: 494 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 553
                     ++I    + + D Y +L  + + ++  + +++   + ++++ +Y NA   
Sbjct: 359 LSDEGIECFKKIIQINPKSHYD-YFQLGFLYQNKDMNEEAVKAYKKVIELSPQYTNAHIN 417

Query: 554 LGDLELKN---------------------DDWVKAKETFRAASDATDGKDSYATL----- 587
           LG +  K                      + + ++ E ++   + T+  + Y  +     
Sbjct: 418 LGVIYFKQKMFDEAQACFKKVIQIDPNCWNAYYRSAEVYQLKGNTTEAIECYKKIIEINP 477

Query: 588 -SLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 646
             + ++   A L+  +++        ++A   Y  ++     NL A N  G V  ++  F
Sbjct: 478 KHIKSYFSLAILKTTQKS-------YDEAIACYQSILAIEEDNLDALNNLGDVYQQQNMF 530

Query: 647 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 693
           D + D F ++ +  S          + NL  +Y ++     A++ Y+
Sbjct: 531 DEALDYFKKILQLDSSYYL-----AYYNLGTIYESKNMLEEALEYYK 572



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 117/559 (20%), Positives = 230/559 (41%), Gaps = 66/559 (11%)

Query: 32  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 91
           +V Y  +  L  LG+ Y        KQ ++   F+      NKA   + +  + ++ K +
Sbjct: 32  EVDYSNVEALYNLGLIYQ-----SKKQLDESLEFL------NKAVEKNPNYINAYICKAE 80

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQACVEFNRGRYSD-SLEFYKRALQVHP 148
             L K  +E+A    +  LE D  +  A   LG A   + +   +D +++  K+A+++ P
Sbjct: 81  NYLQKKMIEEAVVCLQKALEIDPKSAKAHERLGFA---YKKQNLTDKAIDCLKKAIEIDP 137

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA---VMDLQANEAAG- 204
           +   A    +G        + +A   ++  L +DP  V+A ++LA    ++ +  ++   
Sbjct: 138 NFTEA-HHNLGFTYESKKMIDQAYDCYKNILNIDPNYVKAYISLARNYYIEYKTEDSIKY 196

Query: 205 IRKGMEKMQRAFEIY-----------------PYCAMALNYLANHF---FFTGQHFLVEQ 244
           ++K +E  Q   E Y                  Y   A+    N+F   F  G  +  EQ
Sbjct: 197 LKKAIEMDQNCVEAYERLGYIYQNISKKEESIKYFKKAIEIDPNYFNAQFNLGLLYYQEQ 256

Query: 245 LTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
               AL          P  S SY N+   Y+ K D     L Y     ++N  +      
Sbjct: 257 KDNEALTYFQKAIEINPKSSDSYNNIGLVYYHK-DMITEALEYFKKALDVNPLYYKAHHN 315

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            GL   +  L   ++A+ +++K +EI P   ++L  LG + V+    ++  E  +K  +I
Sbjct: 316 SGLAYAKQNL--IQNAIESYKKSIEINPKFLKSLTNLGDLCVKQNLSDEGIECFKKIIQI 373

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
           +P+    +  LG L  + D     +A K  + +++ + +     +  N+GVI+F++  F+
Sbjct: 374 NPKSHYDYFQLGFLYQNKDMNE--EAVKAYKKVIELSPQYTNAHI--NLGVIYFKQKMFD 429

Query: 421 SAHQSFKDA--LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            A   FK    +    W     S  + Y +  + +    + ++ + +       +E+   
Sbjct: 430 EAQACFKKVIQIDPNCWNAYYRS-AEVYQLKGNTT----EAIECYKKI------IEINPK 478

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
            +   F+LA L         A   Y+ IL   +D +DA   L  + + +N    +++   
Sbjct: 479 HIKSYFSLAILKTTQKSYDEAIACYQSILAIEEDNLDALNNLGDVYQQQNMFDEALDYFK 538

Query: 539 EALKVNGKYPNALSMLGDL 557
           + L+++  Y  A   LG +
Sbjct: 539 KILQLDSSYYLAYYNLGTI 557



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 136/357 (38%), Gaps = 58/357 (16%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A ++Y  A  +D      ++G G +  AKG  E+A   F    E D +N         + 
Sbjct: 665 AIRFYLAAIELDPKCLKPYLGLGSIYSAKGINEKALECFSKAQEIDANNAETFNSIGFMY 724

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           +N      +L+  K+AL+++P+   AI    GL   +  Q  KA + +Q+ LQ+ P + +
Sbjct: 725 YNWKILDQALDNLKKALEINPNYELAI-YNTGLVYEQKKQNDKALECYQKVLQIKPNDKK 783

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV----E 243
           A V +     Q N+         K                  A  F+  G  + +    E
Sbjct: 784 AKVRI----FQINQKNQQEDKTPKT-----------------AKEFYQQGYKYYIQLKDE 822

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF------- 296
           Q  E         P    +Y  L   Y  K  +++A + +   V EIN PH         
Sbjct: 823 QSIECLQKALELDPNYYEAYDKLGLIYKEKKMFDQAIVNF-KKVLEIN-PHCLDIIKTVM 880

Query: 297 ----------------------IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
                                 +  YY    V      F  ++TN++KVLE+ P++ +  
Sbjct: 881 NIYLDRKMIDEAKAFYDEVPKNLDTYYEFADVYKSQNMFEESVTNYKKVLELDPNDIDAH 940

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTA 390
             LG +Y+     EKA E  +    ID + A A+ ++G +    +    AL+ F  A
Sbjct: 941 ILLGSLYLNKPDYEKALECYQNILNIDSKQAVAYNNMGLVYFRQNIDDQALEYFNKA 997



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 30/313 (9%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y K   I+     ++     L   +   ++A + ++ +L  + DN+ AL     V 
Sbjct: 465 AIECYKKIIEINPKHIKSYFSLAILKTTQKSYDEAIACYQSILAIEEDNLDALNNLGDVY 524

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ------- 180
             +  + ++L+++K+ LQ+  S          L  Y LG + +++   + AL+       
Sbjct: 525 QQQNMFDEALDYFKKILQLDSS--------YYLAYYNLGTIYESKNMLEEALEYYKKIEE 576

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA-LNYLANHFFFTGQH 239
           ++P+ +   V       Q N  +  +K M+    AFE Y     + L    +   F    
Sbjct: 577 MNPKFIATFVR------QGNVYS--QKNMQ--SEAFECYNKVKDSDLKSTFDDDLFIQTE 626

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
            +VE L E         P  + ++ NL     +    E+A  +Y+A++ E++   + + P
Sbjct: 627 IIVE-LIECYEKAIQLNPKYTQAFCNLGLLNQAIKQMEEAIRFYLAAI-ELDP--KCLKP 682

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y GLG +    G    AL  F K  EI  +N ET  ++G +Y     +++A + L+KA +
Sbjct: 683 YLGLGSIYSAKGINEKALECFSKAQEIDANNAETFNSIGFMYYNWKILDQALDNLKKALE 742

Query: 360 IDPRDAQAFIDLG 372
           I+P    A  + G
Sbjct: 743 INPNYELAIYNTG 755



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/413 (19%), Positives = 169/413 (40%), Gaps = 50/413 (12%)

Query: 49  TYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKI 108
           T LG +  KQ   +E      + + K  +I+      +   G L   K   E+A  A+K 
Sbjct: 348 TNLGDLCVKQNLSDE----GIECFKKIIQINPKSHYDYFQLGFLYQNKDMNEEAVKAYKK 403

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
           V+E       A +    + F +  + ++   +K+ +Q+ P+C  A      + + K G  
Sbjct: 404 VIELSPQYTNAHINLGVIYFKQKMFDEAQACFKKVIQIDPNCWNAYYRSAEVYQLK-GNT 462

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
            +A + +++ ++++P+++++  +LA++           + +   Q    I      ALN 
Sbjct: 463 TEAIECYKKIIEINPKHIKSYFSLAIL---KTTQKSYDEAIACYQSILAIEEDNLDALNN 519

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
           L + +    Q  + ++  +    +     +   +YYNL   Y SK   E+A  YY   ++
Sbjct: 520 LGDVY---QQQNMFDEALDYFKKILQLDSSYYLAYYNLGTIYESKNMLEEALEYY-KKIE 575

Query: 289 EINKPHEFIFPYYGLGQV---------------QLKLGDFRSALTN-------------- 319
           E+N   +FI  +   G V               ++K  D +S   +              
Sbjct: 576 EMNP--KFIATFVRQGNVYSQKNMQSEAFECYNKVKDSDLKSTFDDDLFIQTEIIVELIE 633

Query: 320 -FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS 378
            +EK +++ P   +    LG +   + Q+E+A      A ++DP+  + ++ LG +  + 
Sbjct: 634 CYEKAIQLNPKYTQAFCNLGLLNQAIKQMEEAIRFYLAAIELDPKCLKPYLGLGSIYSAK 693

Query: 379 DTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                AL+ F  A+ +          E  N+IG +++     + A  + K AL
Sbjct: 694 GINEKALECFSKAQEIDANNA-----ETFNSIGFMYYNWKILDQALDNLKKAL 741



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 146/352 (41%), Gaps = 48/352 (13%)

Query: 35   YERIAILNAL-GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 93
            Y++I  +N    V Y  +G +  KQ+  ++    A +YYNKA  +D +   ++   G + 
Sbjct: 2029 YQKIIQINPQKAVAYNNIGLVHYKQKMDDK----AIEYYNKALELDPNYDLSYYNSGLVY 2084

Query: 94   LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS----------------- 136
              K + ++A   +K VL+ +  +   L     ++ N G   D+                 
Sbjct: 2085 EQKKDFDKALECYKKVLQINPKDKKTLNRINLIKKNNGDKIDNQAQEDEGSEPEDYDDDY 2144

Query: 137  --LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
               +  K+ LQ             G   Y   +  +  +  ++A+++DP+  EA   L +
Sbjct: 2145 EDGDEQKKDLQTAED-----YYNQGFKYYNQMKDQECIKCLKKAIEIDPKYSEAYDKLGL 2199

Query: 195  MDLQANEAAGIRKGMEKMQRAFEIYPY---CAMALNYLANHFFFTGQHFLVEQLTETALA 251
            +     E     + +E  ++A E  P    C  AL  +          ++ +++T+ A  
Sbjct: 2200 V---YEENEQFEEAIECYKKAIEHKPNNLDCISALMTI----------YINQKMTDEAKE 2246

Query: 252  VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
              N     +  YY L R Y  K   ++A     +  K I    +++  Y  LG +  +  
Sbjct: 2247 FYNSVSQSADIYYELGRVYEDKSMVDEA---ISSHKKAIELDPKYVNSYIQLGNIYSEKA 2303

Query: 312  DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
             +  A+  F+K+LEI P+N      +G IY   G+ ++A E   KA +I+P+
Sbjct: 2304 SYEQAIEYFQKILEIEPNNEIAYNNIGLIYYDQGKYDQALEQYNKALEINPK 2355



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 92/441 (20%), Positives = 176/441 (39%), Gaps = 80/441 (18%)

Query: 44   LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
            L  YY  L  I ++ +  EE    A  Y+ KA  +D    + ++  G L L K E +QA 
Sbjct: 1972 LETYYE-LATIYSECKMTEE----AIDYFQKAIELDPLYINAYIELGNLYLGKAEYDQAL 2026

Query: 104  SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
              ++ +++ +     A      V + +     ++E+Y +AL++ P+   +     GL   
Sbjct: 2027 ECYQKIIQINPQKAVAYNNIGLVHYKQKMDDKAIEYYNKALELDPNYDLS-YYNSGLVYE 2085

Query: 164  KLGQLGKARQAFQRALQLDPENVEALVALAV--------MDLQANEAAGI---------- 205
            +     KA + +++ LQ++P++ + L  + +        +D QA E  G           
Sbjct: 2086 QKKDFDKALECYKKVLQINPKDKKTLNRINLIKKNNGDKIDNQAQEDEGSEPEDYDDDYE 2145

Query: 206  ----------------------------RKGMEKMQRAFEIYP-----YCAMALNYLANH 232
                                        ++ ++ +++A EI P     Y  + L Y  N 
Sbjct: 2146 DGDEQKKDLQTAEDYYNQGFKYYNQMKDQECIKCLKKAIEIDPKYSEAYDKLGLVYEENE 2205

Query: 233  FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
             F        E+  E       H P        L   Y ++   ++A  +Y +  +  + 
Sbjct: 2206 QF--------EEAIECYKKAIEHKPNNLDCISALMTIYINQKMTDEAKEFYNSVSQSADI 2257

Query: 293  PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
             +E       LG+V         A+++ +K +E+ P    +   LG+IY +    E+A E
Sbjct: 2258 YYE-------LGRVYEDKSMVDEAISSHKKAIELDPKYVNSYIQLGNIYSEKASYEQAIE 2310

Query: 353  LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIG 410
              +K  +I+P +  A+ ++G  LI  D G     +  A     KA E  P   L+  N G
Sbjct: 2311 YFQKILEIEPNNEIAYNNIG--LIYYDQG----KYDQALEQYNKALEINPKYELSLYNSG 2364

Query: 411  VIHFEKGEFESAHQSFKDALG 431
            +++ +K ++E A + +   L 
Sbjct: 2365 LVYEKKDQYEKALEFYNKVLS 2385



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 74   KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
            KA  +D    ++++  G +   K   EQA   F+ +LE + +N  A      + +++G+Y
Sbjct: 2280 KAIELDPKYVNSYIQLGNIYSEKASYEQAIEYFQKILEIEPNNEIAYNNIGLIYYDQGKY 2339

Query: 134  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
              +LE Y +AL+++P    ++    GL   K  Q  KA + + + L ++P    +L  + 
Sbjct: 2340 DQALEQYNKALEINPKYELSL-YNSGLVYEKKDQYEKALEFYNKVLSINPTERRSLNRIK 2398

Query: 194  VM 195
            +M
Sbjct: 2399 LM 2400



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 127/691 (18%), Positives = 253/691 (36%), Gaps = 129/691 (18%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y  A  +D      ++  G   L K   +QA   +K +LE D     A      V F++ 
Sbjct: 1723 YQNAIELDSKYIDAYIQLGNAYLDKPMFDQALETYKKILEIDPQKPVAYNNIGLVYFDQN 1782

Query: 132  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               ++LE + +AL+++P    ++    GL   +  Q  KA + + + L+++P    +L  
Sbjct: 1783 MNDEALEQFNKALEINPKYELSL-YNSGLAYERKNQTEKALECYNKVLEINPTESRSLAR 1841

Query: 192  LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
               +  + N +      ++ +Q  F        +    A   F    H+ ++   + ++ 
Sbjct: 1842 KIALLKKNNSSNTGFDFLKDLQDKF------GPSYKSTAEEKFNQAFHYYMQMEDDKSIE 1895

Query: 252  VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
                     P    +Y  L   Y  K  +++A  +Y   +K   K  E I     + Q +
Sbjct: 1896 CLKKAIEIDPNYYAAYEMLGFVYSKKKKFDEAIEFYQKGIKVNPKGMECIRSLVKIYQDK 1955

Query: 308  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
                + +       K LE Y +       L  IY +    E+A +  +KA ++DP    A
Sbjct: 1956 NMENEAKEFFNQIPKYLETYYE-------LATIYSECKMTEEAIDYFQKAIELDPLYINA 2008

Query: 368  FIDLGELLIS-SDTGAALDAFKTARTL---------------LKKAGEEVPIEVLN---- 407
            +I+LG L +  ++   AL+ ++    +                K+  ++  IE  N    
Sbjct: 2009 YIELGNLYLGKAEYDQALECYQKIIQINPQKAVAYNNIGLVHYKQKMDDKAIEYYNKALE 2068

Query: 408  ----------NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV---------- 447
                      N G+++ +K +F+ A + +K  L     +   D KT   +          
Sbjct: 2069 LDPNYDLSYYNSGLVYEQKKDFDKALECYKKVL----QINPKDKKTLNRINLIKKNNGDK 2124

Query: 448  IDASAS-----------------MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
            ID  A                    Q KD+Q    + N G                 +  
Sbjct: 2125 IDNQAQEDEGSEPEDYDDDYEDGDEQKKDLQTAEDYYNQG----------------FKYY 2168

Query: 491  EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
             Q+ D      L + I      Y +AY +L  + +     + +IE   +A++      + 
Sbjct: 2169 NQMKDQECIKCLKKAIEID-PKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKPNNLDC 2227

Query: 551  LSMLGDLELKNDDWVKAKETFRAASDATD-----GKDSYATLSLGNWNYFAALRNEKRAP 605
            +S L  + +      +AKE + + S + D     G+  Y   S+ +     A+ + K+A 
Sbjct: 2228 ISALMTIYINQKMTDEAKEFYNSVSQSADIYYELGR-VYEDKSMVD----EAISSHKKAI 2282

Query: 606  KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 665
            +L+  ++    +L                  G + +EK  ++ + + F ++ E    +  
Sbjct: 2283 ELDPKYVNSYIQL------------------GNIYSEKASYEQAIEYFQKILEIEPNNEI 2324

Query: 666  VQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
                  + N+  +Y+ QG +  A++ Y   L
Sbjct: 2325 A-----YNNIGLIYYDQGKYDQALEQYNKAL 2350


>gi|196017383|ref|XP_002118506.1| hypothetical protein TRIADDRAFT_62542 [Trichoplax adhaerens]
 gi|190578834|gb|EDV19007.1| hypothetical protein TRIADDRAFT_62542 [Trichoplax adhaerens]
          Length = 1485

 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 139/709 (19%), Positives = 288/709 (40%), Gaps = 114/709 (16%)

Query: 72  YNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASS----AFKIVLEADRDNVPA 119
           YNK+ +I +     + PS   T+   GQ+   +G+ + A S    + KI L    DN P+
Sbjct: 167 YNKSLKIKLTQLGDNHPSIAVTYTNIGQVYKDQGKYDDALSMCNKSLKIQLTQLGDNHPS 226

Query: 120 LLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           +         V +++G+Y D+L  Y ++L++  +  G     + +    +GQ+   +  +
Sbjct: 227 IATTYHSIGGVYYHQGKYDDALSMYNKSLKIDLTQLGDNHPSVAVTYTNIGQVYNDQGKY 286

Query: 176 QRALQLDPENVEA-LVALA----VMDLQANEAAGIRKGMEKMQRAFEIY----------- 219
             AL +  ++++  L  L      +    +   G+ K   K   A  IY           
Sbjct: 287 DDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGGVYKVQGKYDDAVSIYNKSLKIDLTQL 346

Query: 220 ----PYCAMALNYLANHFFFTGQHFLVEQLTETALAVT------NHGPTKSHSYYNLARS 269
               P  A   + +   ++  G++     +   +L +       NH P+ + +Y N+  +
Sbjct: 347 GDNHPSIATTYHSIGGVYYHQGKYGDALSMYNKSLKIKLTQLGDNH-PSIAVTYTNIGLA 405

Query: 270 YHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVL 324
           Y  +G Y+ A   Y  S+K    ++   H  I   Y  +GQV    G +  AL+ + K L
Sbjct: 406 YKDQGKYDDALSMYNKSLKIHLTQLGDNHPSIAVTYTNIGQVYNDQGKYDDALSMYNKSL 465

Query: 325 EI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAF 368
           +I        +P    T  ++G +Y   G+ + A  +  K+ KI         P +A  +
Sbjct: 466 KIKLTQLGDNHPSIATTYHSIGGVYYHQGKYDDALSMYNKSLKIKLTQLGDNHPSNATTY 525

Query: 369 IDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESA 422
             +G++      G   DA     K+ +  L + G+  P      ++IG ++ ++G+++ A
Sbjct: 526 HSIGDVYYHQ--GKYDDALSMYNKSLKIKLTQLGDNHPSNATTYHSIGGVYEDQGKYDDA 583

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASM-LQFKDMQLFHRFENDGNHVELPWNKVT 481
              +  +L   I LT L         D   S+ + + ++   ++ +   +     +NK +
Sbjct: 584 LSMYNKSL--KIKLTQLG--------DNHPSIAMTYHNIGSVYKDQGKYDDALSMYNK-S 632

Query: 482 VLFNLARLLEQIHDTVAASVLYRLILF----KYQDYVDAY-----LRLAAIAKARNNLQL 532
           +   L +L +  H ++A +  Y   ++    KY D +  Y     ++L  +     ++  
Sbjct: 633 LKIKLTQLGDN-HPSIATTYHYIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAT 691

Query: 533 SIELVNEALKVNGKYPNALSMLG-DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGN 591
           +   +       GKY +ALSM    L++K                 T   D++ ++++  
Sbjct: 692 TYHNIGNVYNDQGKYDDALSMYNKSLKIK----------------LTQLGDNHPSIAMTY 735

Query: 592 WNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 651
            N  +   ++ +     + + +  K   T++   H S     +  G V  ++G++D +  
Sbjct: 736 HNIGSVYEDQGKYDDALSIYNKSLKIHLTQLGDNHPSIATTYHNIGSVYEDQGKYDDALS 795

Query: 652 LFT---QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
           ++    ++Q    G     +   + N+  VY  QG +  A+ MY   L+
Sbjct: 796 MYNKSLKIQLTQLGDNHPSIAATYHNIGGVYKDQGKYDDALSMYNKSLK 844



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 92/434 (21%), Positives = 181/434 (41%), Gaps = 76/434 (17%)

Query: 68  ATQYYNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEADRD 115
           A   YNK+ +ID+     + PS   T+   G +   +G+   A S +    KI L    D
Sbjct: 331 AVSIYNKSLKIDLTQLGDNHPSIATTYHSIGGVYYHQGKYGDALSMYNKSLKIKLTQLGD 390

Query: 116 NVPAL------LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
           N P++      +G A  +  +G+Y D+L  Y ++L++H +  G     I +    +GQ+ 
Sbjct: 391 NHPSIAVTYTNIGLAYKD--QGKYDDALSMYNKSLKIHLTQLGDNHPSIAVTYTNIGQVY 448

Query: 170 KARQAFQRALQLDPENVEA-LVALA----VMDLQANEAAGIRKGMEKMQRAFEIY----- 219
             +  +  AL +  ++++  L  L      +    +   G+     K   A  +Y     
Sbjct: 449 NDQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHSIGGVYYHQGKYDDALSMYNKSLK 508

Query: 220 ----------PYCAMALNYLANHFFFTGQHFLVEQLTETALAVT------NHGPTKSHSY 263
                     P  A   + + + ++  G++     +   +L +       NH P+ + +Y
Sbjct: 509 IKLTQLGDNHPSNATTYHSIGDVYYHQGKYDDALSMYNKSLKIKLTQLGDNH-PSNATTY 567

Query: 264 YNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFRSALT 318
           +++   Y  +G Y+ A   Y  S+K    ++   H  I   Y+ +G V    G +  AL+
Sbjct: 568 HSIGGVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAMTYHNIGSVYKDQGKYDDALS 627

Query: 319 NFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------P 362
            + K L+I        +P    T   +G +Y   G+ + A  +  K+ KI         P
Sbjct: 628 MYNKSLKIKLTQLGDNHPSIATTYHYIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNHP 687

Query: 363 RDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVPIEVL--NNIGVIHFEK 416
             A  + ++G   + +D G   DA     K+ +  L + G+  P   +  +NIG ++ ++
Sbjct: 688 SIATTYHNIGN--VYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAMTYHNIGSVYEDQ 745

Query: 417 GEFESAHQSFKDAL 430
           G+++ A   +  +L
Sbjct: 746 GKYDDALSIYNKSL 759



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/425 (20%), Positives = 174/425 (40%), Gaps = 68/425 (16%)

Query: 72   YNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEADRDNVPA 119
            YNK+ +I +     + PS   T+   G +   +G+ + A S +    KI L    DN P+
Sbjct: 881  YNKSLKIHLTQLGDNHPSIAMTYHNIGSVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPS 940

Query: 120  LLGQAC----VEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQ 167
            +    C    V + + +Y D+L  Y ++L++        HPS        IGL     G+
Sbjct: 941  IATTYCNIGGVYYYQSKYDDALSMYNKSLKIKLTQLGDNHPSI-AVTYTNIGLVYKNQGK 999

Query: 168  LGKARQAFQRALQLD----PENVEALVALAV-MDLQANEAAGIRKGMEKMQRAFEI---- 218
               A   + ++L++      +N  ++ A    + L  N+       +    ++ +I    
Sbjct: 1000 YDDALSMYNKSLKIQLTQLGDNYPSIAATYTNIGLVYNDQGKYDDALSMYNKSLKINLTQ 1059

Query: 219  ----YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT------NHGPTKSHSYYNLAR 268
                +P  A     + + +   G++     +   +L +       NH P+ + +Y+N+  
Sbjct: 1060 LGDNHPSIATTYCNIGSVYKDQGKYDDALSMYNKSLKIQLTQLGDNH-PSIATTYHNIGS 1118

Query: 269  SYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKV 323
             Y  +G Y+ A   Y  S+K    ++   H  I   Y+ +G V    G +  AL+ + K 
Sbjct: 1119 VYEDQGKYDDALSIYNKSLKIDLTQLGDNHSNIATTYHNIGSVYEDQGKYDDALSMYNKS 1178

Query: 324  LEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRDAQA 367
            L+I        +P    T + +G +Y   G+ + A  +  K+ KI         P  A  
Sbjct: 1179 LKIKLTQLGDNHPSIAATYRNIGQVYNDQGKYDDALSMYNKSLKIHLTQLGDNHPSIATT 1238

Query: 368  FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVL-NNIGVIHFEKGEFESAHQS 425
            + ++G +       A     K+ +  L +  +  P I V   NIG ++ ++G+++ A   
Sbjct: 1239 YHNIGSVYQGKYDDALSMYNKSMKIDLTQLDDNHPSIAVTYTNIGQVYKDQGKYDDALSM 1298

Query: 426  FKDAL 430
            +  +L
Sbjct: 1299 YNKSL 1303



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 132/692 (19%), Positives = 270/692 (39%), Gaps = 122/692 (17%)

Query: 72   YNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEADRDNVPA 119
            YNK+ +I +     + PS   T+   G +   +G+ + A S +    KI L    DN P+
Sbjct: 587  YNKSLKIKLTQLGDNHPSIAMTYHNIGSVYKDQGKYDDALSMYNKSLKIKLTQLGDNHPS 646

Query: 120  LLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
            +         V  ++G+Y D+L  Y ++L++  +  G     I    + +G +   +  +
Sbjct: 647  IATTYHYIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGNVYNDQGKY 706

Query: 176  QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
              AL +                  N++  I     K+ +  + +P  AM  + + + +  
Sbjct: 707  DDALSM-----------------YNKSLKI-----KLTQLGDNHPSIAMTYHNIGSVYED 744

Query: 236  TGQHFLVEQLTETALAV------TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK- 288
             G++     +   +L +       NH P+ + +Y+N+   Y  +G Y+ A   Y  S+K 
Sbjct: 745  QGKYDDALSIYNKSLKIHLTQLGDNH-PSIATTYHNIGSVYEDQGKYDDALSMYNKSLKI 803

Query: 289  ---EINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKA 336
               ++   H  I   Y+ +G V    G +  AL+ + K L+I        +P    T   
Sbjct: 804  QLTQLGDNHPSIAATYHNIGGVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHN 863

Query: 337  LGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAF- 387
            +G +Y    + + A  +  K+ KI         P  A  + ++G   +  D G   DA  
Sbjct: 864  IGGVYYYQSKFDDALSMYNKSLKIHLTQLGDNHPSIAMTYHNIGS--VYKDQGKYDDALS 921

Query: 388  ---KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 442
               K+ +  L + G+  P       NIG +++ + +++ A   +  +L   I LT L   
Sbjct: 922  MYNKSLKIQLTQLGDNHPSIATTYCNIGGVYYYQSKYDDALSMYNKSLK--IKLTQLGDN 979

Query: 443  TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 502
              +  +        + ++ L ++ +   +     +NK ++   L +L +  + ++AA+  
Sbjct: 980  HPSIAV-------TYTNIGLVYKNQGKYDDALSMYNK-SLKIQLTQLGDN-YPSIAATYT 1030

Query: 503  YRLILF----KYQDYVDAY-----LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 553
               +++    KY D +  Y     + L  +     ++  +   +    K  GKY +ALSM
Sbjct: 1031 NIGLVYNDQGKYDDALSMYNKSLKINLTQLGDNHPSIATTYCNIGSVYKDQGKYDDALSM 1090

Query: 554  LG-----DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 608
                    L    D+      T+       + +  Y            AL    ++ K++
Sbjct: 1091 YNKSLKIQLTQLGDNHPSIATTYHNIGSVYEDQGKYDD----------ALSIYNKSLKID 1140

Query: 609  ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ---VQEAASGSVF 665
             T L             H++     +  G V  ++G++D +  ++ +   ++    G   
Sbjct: 1141 LTQLGD----------NHSNIATTYHNIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNH 1190

Query: 666  VQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
              +   + N+  VY  QG +  A+ MY   L+
Sbjct: 1191 PSIAATYRNIGQVYNDQGKYDDALSMYNKSLK 1222



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 29/198 (14%)

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFR 314
           S SY N+A  Y ++G Y  A   Y  S+K    ++   H  I   Y  +GQV    G + 
Sbjct: 144 SESYRNIASIYGNQGKYNDALSMYNKSLKIKLTQLGDNHPSIAVTYTNIGQVYKDQGKYD 203

Query: 315 SALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID----- 361
            AL+   K L+I        +P    T  ++G +Y   G+ + A  +  K+ KID     
Sbjct: 204 DALSMCNKSLKIQLTQLGDNHPSIATTYHSIGGVYYHQGKYDDALSMYNKSLKIDLTQLG 263

Query: 362 ---PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IEVLNNIGVI 412
              P  A  + ++G+  + +D G   DA     K+ +  L + G+  P      +NIG +
Sbjct: 264 DNHPSVAVTYTNIGQ--VYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGGV 321

Query: 413 HFEKGEFESAHQSFKDAL 430
           +  +G+++ A   +  +L
Sbjct: 322 YKVQGKYDDAVSIYNKSL 339



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 21/169 (12%)

Query: 72   YNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEADRDNVPA 119
            YNK+ +ID+     + PS   T+   GQ+   +G+ + A S +    KI L    DN P+
Sbjct: 1257 YNKSMKIDLTQLDDNHPSIAVTYTNIGQVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPS 1316

Query: 120  LLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
            +         V  ++G+Y D+L  Y ++L++  +  G     I    + +G + K +  +
Sbjct: 1317 IATTYHNIGSVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHNIGSVYKDQGKY 1376

Query: 176  QRALQLDPENVE-ALVALAVMDLQANE----AAGIRKGMEKMQRAFEIY 219
              AL +  ++++ +LV L    L   +     A +   +   ++AF +Y
Sbjct: 1377 DDALSMLNKSLQISLVTLGENHLHTAQLYRSQAVVNYKLSNYRQAFSLY 1425


>gi|20093095|ref|NP_619170.1| hypothetical protein MA4306 [Methanosarcina acetivorans C2A]
 gi|19918428|gb|AAM07650.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1079

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 146/362 (40%), Gaps = 52/362 (14%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y+ A  I+      W  KG  L   G  E+A   +K  LE +  +  AL G A +    G
Sbjct: 666 YDTALSINPLRTEAWYEKGSALDKLGRSEEALECYKKALEINPQSSDALYGMASISNTLG 725

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           R  +++ +Y + L  + S P A++ G       LG+  +A + F   L+L+ EN+EAL  
Sbjct: 726 RSEEAIAYYDQLLAANASDPEALQ-GKSQALVNLGRYEEAVECFNPLLELESENIEALDG 784

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
            A       ++    + +E   R  ++ P         +N    T +  L E+L      
Sbjct: 785 RA---FSLTKSGRQEEALEDYDRILQLEP---------SNSKAMTEKASLFEEL------ 826

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
                                 G YE+A   Y   ++   +  E +   Y  G+    +G
Sbjct: 827 ----------------------GRYEEAASTYGEILRITPENREIM---YRQGKALEAMG 861

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA--FI 369
           DF +A+  ++++L + P N + +   G  Y ++ + ++A     KA +  P +A A  F 
Sbjct: 862 DFEAAIACYDQILALDPKNIDAINNKGFAYAKMEKYQEAIASYDKAIEYAPNNATAWYFK 921

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
                 ISS+  AA+++F    TL         I    N G ++   GE   +  S+  A
Sbjct: 922 GCANFAISSNI-AAVESFDKVVTLKPDC-----ITAWYNRGYLYNVMGEVNESINSYNSA 975

Query: 430 LG 431
           L 
Sbjct: 976 LA 977



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 149/363 (41%), Gaps = 42/363 (11%)

Query: 25   EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 84
            EI+   +D  Y   +I N LG             R +E     A  YY++    +  +P 
Sbjct: 705  EINPQSSDALYGMASISNTLG-------------RSEE-----AIAYYDQLLAANASDPE 746

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
               GK Q L+  G  E+A   F  +LE + +N+ AL G+A      GR  ++LE Y R L
Sbjct: 747  ALQGKSQALVNLGRYEEAVECFNPLLELESENIEALDGRAFSLTKSGRQEEALEDYDRIL 806

Query: 145  QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
            Q+ PS   A+     L   +LG+  +A   +   L++ PEN E      +M  Q      
Sbjct: 807  QLEPSNSKAMTEKASLFE-ELGRYEEAASTYGEILRITPENRE------IMYRQG----- 854

Query: 205  IRKGMEKMQRAFEIYPYC---AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
              K +E M   FE    C    +AL+   N      + F   ++ +   A+ ++     +
Sbjct: 855  --KALEAMGD-FEAAIACYDQILALD-PKNIDAINNKGFAYAKMEKYQEAIASYDKAIEY 910

Query: 262  SYYNLARSYHSKGDYEKAGLYYMASVKEINK----PHEFIFPYYGLGQVQLKLGDFRSAL 317
            +  N A +++ KG    A    +A+V+  +K      + I  +Y  G +   +G+   ++
Sbjct: 911  APNN-ATAWYFKGCANFAISSNIAAVESFDKVVTLKPDCITAWYNRGYLYNVMGEVNESI 969

Query: 318  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             ++   L I P+    L      + ++ + E A     K   IDP    A  + G  +  
Sbjct: 970  NSYNSALAINPNEPSVLYNKRFAHYRIKEYEDASACKTKLDSIDPGFVTALQNRGTRIFI 1029

Query: 378  SDT 380
             +T
Sbjct: 1030 PET 1032



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 156/403 (38%), Gaps = 63/403 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA-CV 126
           A Q Y++A  ++      W  KG  L   G  ++A + ++ VL ++ +N+  L  +  C+
Sbjct: 252 AIQCYDEAISLNPDLTEAWYNKGVDLEGMGLYQEALTCYEFVLLSEPENLNTLQKKGFCL 311

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-N 185
           E   GR  ++L+ Y+  L   P    A     G     +G    A   + RAL  D    
Sbjct: 312 E-QLGRNEEALQCYEEILTYSPDDADA-WYSKGSVLNAMGDYDAAIACYDRALNPDAGIE 369

Query: 186 VEALVALAVMDLQANEAA--GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           VE +    +    A ++A  G  +  E    A +I+    +A + L N+      +  V 
Sbjct: 370 VEEIGEALLEKFNAYDSALPGYSEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVL 429

Query: 244 QLTETALAVTNH--------------------GPTKSHSYYNLARSYHSKG-DYEKAGLY 282
           + TE+  AV  +                       K +S Y  A+ ++ KG D  K G Y
Sbjct: 430 E-TESGHAVVWYMKALDLDRLDRYEEAAGCYDKALKLNSEY--AKVWYRKGYDSSKFGQY 486

Query: 283 YMASV---KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
             A+    K +N    +   +YG      K GD+  AL  +EKVL   PD+ E     G 
Sbjct: 487 KDAAKSFDKAVNLDDNYTLAWYGKAFALAKTGDYEEALVCYEKVLAAAPDSAEIWYNKGL 546

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 399
           +  QL + ++A +   KA +I+P                        +  AR  L K  E
Sbjct: 547 LLDQLERHQEASDCYSKALQINP-----------------------GYSVARFRLNKNTE 583

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 442
           E+        G +     E +    S K A+  G W  LL+ K
Sbjct: 584 EL-------YGGLTPNSSEGKKTEVSPKSAISGGFWSYLLNYK 619



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 131/330 (39%), Gaps = 41/330 (12%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
           + KG  L +  + E +   F   LE D ++  A  G+ C   +  RY ++++ Y +AL+ 
Sbjct: 67  IKKGNDLYSLKKYELSIECFDDALEMDSNSSMACYGKGCALTSLKRYEEAIDCYDKALES 126

Query: 147 HPSCPGAIR------------LGIGLCRYKLGQLGK--ARQAFQRALQLDPENVEALVAL 192
            P+   +              +    C  K   +    +R  FQ+AL  +   +E   AL
Sbjct: 127 FPTSSWSWYQKGDEYIQTQNYVEAINCYEKSFSMDSYLSRVWFQKALASEKLGMEQ-EAL 185

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
           A  D      + + K ++   +A+          NY      F G           AL +
Sbjct: 186 ASYDSSIGLGSNVSKTLQMKGKAY------TGLENYDEAMRCFNG-----------ALNI 228

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
           T   P     +      Y   GDYE A   Y  ++  +N   +    +Y  G     +G 
Sbjct: 229 T---PDDFELWTQKGIMYDMSGDYEAAIQCYDEAIS-LNP--DLTEAWYNKGVDLEGMGL 282

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           ++ ALT +E VL   P+N  TL+  G    QLG+ E+A +   +     P DA A+   G
Sbjct: 283 YQEALTCYEFVLLSEPENLNTLQKKGFCLEQLGRNEEALQCYEEILTYSPDDADAWYSKG 342

Query: 373 ELLIS-SDTGAALDAFKTARTLLKKAGEEV 401
            +L +  D  AA+  +   R L   AG EV
Sbjct: 343 SVLNAMGDYDAAIACYD--RALNPDAGIEV 370


>gi|339500052|ref|YP_004698087.1| hypothetical protein Spica_1434 [Spirochaeta caldaria DSM 7334]
 gi|338834401|gb|AEJ19579.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
           caldaria DSM 7334]
          Length = 384

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 21/329 (6%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           +K  + +  E S    KG  L+ + ++ +A +AF+ +L  D DN  AL+G       RG 
Sbjct: 22  DKKEKDEFSEISELSKKGYQLIKENKLAEAVAAFEEILAKDPDNNYALVGLGDTSRKRGS 81

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
           + +++E+Y+R L  HP    A+  G+  C   L Q  KA + +++ L  D  N+  L  +
Sbjct: 82  FREAVEYYRRCLSHHPGNNYAL-FGLADCYKALNQYQKAIEIWEQYLLHDDRNITVLTRV 140

Query: 193 A-----VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A     V D + ++A  +R  + +M+   E  PY  + L +L  H+ F       + L  
Sbjct: 141 ADAYRKVRDFRKSKAVYLR--VLEME---ENNPYALIGLGHL--HYDFKEYR---DALYY 190

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
               ++ H             + H K      G+ Y     +++ P+ F +  +GL    
Sbjct: 191 WEKMLSLHKDNVDIRVLTSIGNCHRKLKTFAEGVPYFERALKMD-PYNF-YALFGLADCF 248

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             +     +L  + K+LE  P N   L   G  Y  +G+ +KA E   +A  I   +   
Sbjct: 249 RGMNQQHRSLEYWNKILEQDPRNKVILTRAGDAYRNMGEFDKAAEYYHRALNI---EFDM 305

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKK 396
           +  LG  +IS   G   DA ++ R L+++
Sbjct: 306 YAVLGLAVISKMQGKYDDAIESLRRLIQQ 334



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 115/270 (42%), Gaps = 47/270 (17%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP-SCPGAIRL 156
           +  ++ + +  VLE + +N  AL+G   + ++   Y D+L ++++ L +H  +    +  
Sbjct: 149 DFRKSKAVYLRVLEMEENNPYALIGLGHLHYDFKEYRDALYYWEKMLSLHKDNVDIRVLT 208

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            IG C  KL    +    F+RAL++DP N  AL  LA             +GM +  R+ 
Sbjct: 209 SIGNCHRKLKTFAEGVPYFERALKMDPYNFYALFGLA----------DCFRGMNQQHRSL 258

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           E +                   + ++EQ     + +T  G            +Y + G++
Sbjct: 259 EYW-------------------NKILEQDPRNKVILTRAGD-----------AYRNMGEF 288

Query: 277 EKAGLYYMASVKEINKPHEF-IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
           +KA  YY  ++       EF ++   GL  +    G +  A+ +  ++++  P N     
Sbjct: 289 DKAAEYYHRALN-----IEFDMYAVLGLAVISKMQGKYDDAIESLRRLIQQDPKNYRLYI 343

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
            L   +++ G  E+A E+L +  K   R+A
Sbjct: 344 ELADCWIKKGDKERAIEVLAEFQKTGQRNA 373


>gi|302821262|ref|XP_002992295.1| peptide N-acetylglucosaminyltransferase [Selaginella
           moellendorffii]
 gi|300139945|gb|EFJ06676.1| peptide N-acetylglucosaminyltransferase [Selaginella
           moellendorffii]
          Length = 933

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 162/393 (41%), Gaps = 70/393 (17%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            ++LL++ +   A   +K VLEA+   V AL+ +      +G    +LE +  AL++ PS
Sbjct: 92  AEILLSRSKFADAQLLYKSVLEAEPSCVQALVSKGVCLQMQGNARQALECFASALKLDPS 151

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV--------MDLQANE 201
              A+    G+   + G L +A +A+Q+ALQ DP+   AL +LAV        + L  N 
Sbjct: 152 NARALT-QCGILYKEEGHLLEASEAYQKALQADPKYKPALESLAVVLTDIGTSLKLSGNV 210

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV----TNHGP 257
             G++K  E + RA   Y          A  F+  G  +      +TAL        H P
Sbjct: 211 HDGMQKYFEAL-RADATY----------APAFYNLGVVYSEMLQYDTALNCYEKAAAHRP 259

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYY----------------MA--------SVKEINKP 293
             + +Y N+   Y ++GD + A   Y                MA         VK     
Sbjct: 260 MYAEAYCNMGVIYKNRGDLDAAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGNI 319

Query: 294 HEFIFPY--------------YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
           H+ +  Y              Y LG    ++  F  A+  +E  L   P   E    LG 
Sbjct: 320 HQGVAYYKKALLYNWHYADAMYNLGVAYGEMLKFDMAVVMYELALHFNPQCAEACNNLGV 379

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 399
           IY     +++A E  + A  I P  +Q+  +LG  ++ +  G       +A  +++KA  
Sbjct: 380 IYKDRDNLDRAVECYQMALTIKPDFSQSLNNLG--VVYTVQG----KMDSASAMIEKAIL 433

Query: 400 EVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             P   E  NN+GV+H + G    A ++++  L
Sbjct: 434 ANPSYAEAYNNLGVLHRDAGNIYLAIEAYERCL 466



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 113/294 (38%), Gaps = 63/294 (21%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G+ R AL  F   L++ P N   L   G +Y + G + +A E  +KA + DP+   A   
Sbjct: 133 GNARQALECFASALKLDPSNARALTQCGILYKEEGHLLEASEAYQKALQADPKYKPALES 192

Query: 371 LGELLISSDTGAAL-------------------DA------------------FKTARTL 393
           L  +L  +D G +L                   DA                  + TA   
Sbjct: 193 LAVVL--TDIGTSLKLSGNVHDGMQKYFEALRADATYAPAFYNLGVVYSEMLQYDTALNC 250

Query: 394 LKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALG---------DGIWLTLLDSK 442
            +KA    P+  E   N+GVI+  +G+ ++A   ++  L          + + + L D  
Sbjct: 251 YEKAAAHRPMYAEAYCNMGVIYKNRGDLDAAIACYERCLAVSPNFEIAKNNMAIALTDLG 310

Query: 443 TKTYV-IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASV 501
           TK  +  +    +  +K   L++            W+    ++NL     ++     A V
Sbjct: 311 TKVKLEGNIHQGVAYYKKALLYN------------WHYADAMYNLGVAYGEMLKFDMAVV 358

Query: 502 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
           +Y L L       +A   L  I K R+NL  ++E    AL +   +  +L+ LG
Sbjct: 359 MYELALHFNPQCAEACNNLGVIYKDRDNLDRAVECYQMALTIKPDFSQSLNNLG 412


>gi|427715575|ref|YP_007063569.1| hypothetical protein Cal7507_0234 [Calothrix sp. PCC 7507]
 gi|427348011|gb|AFY30735.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 607

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 133/294 (45%), Gaps = 19/294 (6%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG--RYSDSLEFYKRALQVHPSCPGA 153
           +GE E+A + +   +E D D   A   +A +  + G   Y  ++  Y RALQ++P+   A
Sbjct: 16  QGEFEEAIAYYTQAIELDPDYAEAYHNRAII-LSSGIKDYHGAIADYNRALQINPNFAEA 74

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKM 212
                   RY L     A   + RALQ++P   E+         +A++A G     +   
Sbjct: 75  YS-NRANARYFLEDYQGAIADYNRALQINPHLSESYHGRG----KASKALGDYETAIADY 129

Query: 213 QRAFEIYPYCAMALNY-LANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLA 267
           ++A +I P     +N  +AN +   G     +   + A+A  N      P  + +Y N  
Sbjct: 130 RQALQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQALQLHPHFAAAYSNRG 189

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
            +YH  GDY +A      ++K   K  E    Y+ LG     LGD++SA+ N+ + LEI 
Sbjct: 190 NAYHLLGDYHQAIADQNQALKLEPKLAE---AYHNLGNAYYSLGDYQSAIANYNRALEIK 246

Query: 328 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
           P+        G ++  + + ++A     +A K++P D QA+ + G  L+ S  G
Sbjct: 247 PEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERG--LVHSSLG 298



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 139/368 (37%), Gaps = 53/368 (14%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN+A  I       +  +G +     E +QA + F   ++ + D+V A   +  V  + G
Sbjct: 239 YNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERGLVHSSLG 298

Query: 132 RYSDSLEFYKRALQVHPSCP-----------------GAIR-----------LGIGLC-- 161
            Y  ++  Y +ALQ +P+                   GAI            L  G C  
Sbjct: 299 NYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNPLLAEGYCDR 358

Query: 162 ---RYKLGQLGKARQAFQRALQLDPENVEA-----LVALAVMDLQANEAAGIRKGMEKMQ 213
              R  LG    A + + RAL  D     A     +V  A+ D Q        + +    
Sbjct: 359 AVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDYQ--------RAIADNT 410

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
           +A +I P  + A     N     G           AL +    P    +YYN A   ++ 
Sbjct: 411 QAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQIN---PDFGEAYYNRASIRYAL 467

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
            DY  A   Y  +++    PH   F Y   G     L D++ A+ ++ + + + P   + 
Sbjct: 468 KDYRGAIADYTQALRL--NPHSAAF-YSDRGNAHYALEDYQGAIADYNQAIALEPSFADD 524

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 392
               G     LG ++ A   L++A ++ P  A+A+I   ++  +  DT  A+  F+ +  
Sbjct: 525 WFNRGRSRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYRNLGDTQKAIADFQASAD 584

Query: 393 LLKKAGEE 400
           L  K G +
Sbjct: 585 LYYKQGNK 592



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 54/280 (19%)

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK---GMEKMQRA 215
           GL +   G+  +A   + +A++LDP+  EA    A++      ++GI+     +    RA
Sbjct: 10  GLNKNFQGEFEEAIAYYTQAIELDPDYAEAYHNRAII-----LSSGIKDYHGAIADYNRA 64

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
            +I P  A A +  AN  +F   +         AL +    P  S SY+   ++  + GD
Sbjct: 65  LQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQIN---PHLSESYHGRGKASKALGD 121

Query: 276 YEKAGLYYMASVKEINKPHEFIF-----PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
           YE A   Y  +++   +   +I       Y+  G  +   GD + A+ +F + L+++P  
Sbjct: 122 YETAIADYRQALQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQALQLHPHF 181

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
                  G+ Y  LG   +A     +A K++P+ A+A+                      
Sbjct: 182 AAAYSNRGNAYHLLGDYHQAIADQNQALKLEPKLAEAY---------------------- 219

Query: 391 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                           +N+G  ++  G+++SA  ++  AL
Sbjct: 220 ----------------HNLGNAYYSLGDYQSAIANYNRAL 243


>gi|428312973|ref|YP_007123950.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
 gi|428254585|gb|AFZ20544.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
          Length = 738

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 25/306 (8%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y+KA +I       W+G+G  L +  + ++A ++F   LE   D++ A   +  V+    
Sbjct: 424 YDKAIQIQPDYAEAWIGRGNALDSLQQYKEAINSFDRALEFKSDSLEAWNNKGNVQIKLQ 483

Query: 132 RYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           +YSD++  + +A+++ P+  P     G  L  + L Q  +A +++ +A++  P+   A  
Sbjct: 484 KYSDAIASFDKAIELQPNYAPTWNHRGWAL--HNLRQYEEAVKSYNKAVEYQPDFPNAWY 541

Query: 191 --ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
               A+++LQ  + A     +E   +A +  P    A       ++  G   L  +  E 
Sbjct: 542 QRGNALINLQKYQEA-----VESYDKAVQFQPNFYKA-------WYSRGSALLNLRQYEQ 589

Query: 249 ALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
           A A         P  S ++YN   S H    Y++A   Y    K I    +F    Y LG
Sbjct: 590 AFASFDQAVKFNPDDSEAWYNRGWSLHQLQRYQEAVASYN---KAIQLRKKFYQAQYNLG 646

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
            V  KL  ++ A  ++ KVLEI P++ E   + G+  V L + + A +   KA +  P D
Sbjct: 647 NVFYKLKRYQDAFVSYNKVLEIQPNHYEAWYSRGNALVNLKRYQDAIDSYNKALQYKP-D 705

Query: 365 AQAFID 370
            QA  D
Sbjct: 706 YQAAKD 711



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 24/248 (9%)

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           RY D+L  Y RA+++ P    A   G G     L +  +AR A+ +A+Q+ P+  EA + 
Sbjct: 382 RYDDALASYNRAVELKPEYAAAWN-GKGNTLLALKRYEEARNAYDKAIQIQPDYAEAWIG 440

Query: 192 L--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
              A+  LQ       ++ +    RA E       A N   N      ++       + A
Sbjct: 441 RGNALDSLQQ-----YKEAINSFDRALEFKSDSLEAWNNKGNVQIKLQKYSDAIASFDKA 495

Query: 250 LAV-TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI--FP--YYGLG 304
           + +  N+ PT +H  + L    H+   YE+A       VK  NK  E+   FP  +Y  G
Sbjct: 496 IELQPNYAPTWNHRGWAL----HNLRQYEEA-------VKSYNKAVEYQPDFPNAWYQRG 544

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
              + L  ++ A+ +++K ++  P+  +   + G   + L Q E+A     +A K +P D
Sbjct: 545 NALINLQKYQEAVESYDKAVQFQPNFYKAWYSRGSALLNLRQYEQAFASFDQAVKFNPDD 604

Query: 365 AQAFIDLG 372
           ++A+ + G
Sbjct: 605 SEAWYNRG 612


>gi|116622427|ref|YP_824583.1| hypothetical protein Acid_3324 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225589|gb|ABJ84298.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 783

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 136/340 (40%), Gaps = 48/340 (14%)

Query: 91  QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
           QL + +GE E A    + +L+ D+ NV A L ++     + ++ DS       L+ +P  
Sbjct: 434 QLQVTRGEFEAALKTAEEILKFDKGNVNARLIESAALMGQKKFGDSRVMLDAMLKTNPGS 493

Query: 151 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 210
           P  +   +G+      +  +A  +F+RA QL+P N   L+ +   ++  N+     + ++
Sbjct: 494 PDVL-FQLGVVNLAENKFKEAEDSFRRAYQLNPANSRGLMGIVETNMAQNKT---EEAVK 549

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
            +Q   +  P     L  L N     G++    Q     L  T+ G  +   Y  L  +Y
Sbjct: 550 LLQAESDKSPNRTDLLTALGNTAVRAGKYDFAIQTFNRVLEQTDKGKAQGDIYLRLGETY 609

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
             KG                                     D   A+   +K  E  PDN
Sbjct: 610 RRKG-------------------------------------DLNGAIQALQKARESLPDN 632

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
              L  L  +     +  +A+++     K+DP +A A  +L  ++  +++G  LD    A
Sbjct: 633 IIVLSTLALVLDAASRRPEAKQVYEATIKLDPNNAVALNNLAFMM--AESGGDLD---EA 687

Query: 391 RTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKD 428
            T  ++A + +P   E+ + +G I+ +K    +A   FKD
Sbjct: 688 LTKAQRAKQLLPNLFEISDTLGWIYLKKNLAANAIDIFKD 727



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           KGD  KA L  + +V  + +  E     Y LG+     G++  A   F K +E+ PD   
Sbjct: 371 KGDVAKA-LQELQAV--VTRAPENPVSRYNLGRAHAARGEWEQARQQFAKAIELRPDYVL 427

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
              AL  + V  G+ E A +   +  K D  +  A       LI S        F  +R 
Sbjct: 428 ARLALAQLQVTRGEFEAALKTAEEILKFDKGNVNA------RLIESAALMGQKKFGDSRV 481

Query: 393 LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA 429
           +L    +  P   +VL  +GV++  + +F+ A  SF+ A
Sbjct: 482 MLDAMLKTNPGSPDVLFQLGVVNLAENKFKEAEDSFRRA 520



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 13/113 (11%)

Query: 171 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
           A+Q ++  ++LDP N  AL  LA M   A     + + + K QRA ++ P      + L 
Sbjct: 652 AKQVYEATIKLDPNNAVALNNLAFM--MAESGGDLDEALTKAQRAKQLLPNLFEISDTL- 708

Query: 231 NHFFFTGQHFLVEQLTETALAV----TNHGPTKSHSYYNLARSYHSKGDYEKA 279
                 G  +L + L   A+ +     N  P  S  +Y+LA +Y  +GD  KA
Sbjct: 709 ------GWIYLKKNLAANAIDIFKDLVNKQPNHSTYHYHLAMAYSQQGDKSKA 755


>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
           18658]
 gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
           18658]
          Length = 779

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 130/309 (42%), Gaps = 26/309 (8%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN+A R+D  + S +  +G     KG++++A + +   +  D  N PA   +      +G
Sbjct: 264 YNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKG 323

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               ++  +  A+++ P+   A  +  G    + G+  KA   F  A++LDP N  A + 
Sbjct: 324 DLDKAIADFDEAIRLDPNDASAY-VNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLN 382

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
            +      +E     K +        + P  A A       +F  G  +  ++  + A+A
Sbjct: 383 RSHA---WSEKEEYDKAIADANEIIRLDPQNAWA-------YFKRGYAWGKKKEHDKAIA 432

Query: 252 VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYYGL 303
             N      PT + +Y N   ++  K +++KA       + + NK         + Y+  
Sbjct: 433 DDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKA-------ITDFNKAIRLDPTNTWAYFNR 485

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G    +  D+  A+ +F + +++ P+        G+ + Q    +KA     KA ++DP 
Sbjct: 486 GYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPI 545

Query: 364 DAQAFIDLG 372
           +A A+ + G
Sbjct: 546 NAPAYFNRG 554



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 123/307 (40%), Gaps = 22/307 (7%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN+A R+D  + S +  +G     K + ++  + +   +  D D+ P    +A     + 
Sbjct: 196 YNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKE 255

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            Y  ++  Y  A+++ P    A     G    + G L KA   +   ++LDP N  A   
Sbjct: 256 DYDKTIADYNEAIRLDPDDASAY-FNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFN 314

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
                   N+   + K +     A  + P  A A       +   G+H       + A+A
Sbjct: 315 RGYA---WNQKGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEH-------DKAIA 364

Query: 252 VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK--PHEFIFPYYGLGQ 305
             N      PT + +Y N + ++  K +Y+KA    +A   EI +  P    + Y+  G 
Sbjct: 365 DFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKA----IADANEIIRLDPQN-AWAYFKRGY 419

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
              K  +   A+ +  + + + P N       G+ + +  + +KA     KA ++DP + 
Sbjct: 420 AWGKKKEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDPTNT 479

Query: 366 QAFIDLG 372
            A+ + G
Sbjct: 480 WAYFNRG 486



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 125/304 (41%), Gaps = 22/304 (7%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           +++A R+D ++ S +V +G     KGE ++A + F   +  D  N  A L ++     + 
Sbjct: 332 FDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKE 391

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            Y  ++      +++ P    A     G    K  +  KA      A++LDP N  A + 
Sbjct: 392 EYDKAIADANEIIRLDPQNAWAY-FKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLN 450

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
                   +E     K +    +A  + P    A       +F  G  +  ++  + A+A
Sbjct: 451 RGYA---WDEKEEHDKAITDFNKAIRLDPTNTWA-------YFNRGYAWGQKEDYDKAIA 500

Query: 252 VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK--EINKPHEFIFPYYGLGQ 305
             N      P  + +Y N   ++  K DY+KA   +  +++   IN P      Y+  G 
Sbjct: 501 DFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAP-----AYFNRGH 555

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
              +   +  A+ ++ + + + P+N       GH   +  + +KA     +A +IDP+ A
Sbjct: 556 AWSQKEGYDKAIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAA 615

Query: 366 QAFI 369
            A+I
Sbjct: 616 NAYI 619



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 18/237 (7%)

Query: 140 YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 199
           Y  A++++P+   A     G    +  +  KA   +  A++LDP+   A         Q 
Sbjct: 128 YDEAIRLNPNDASAY-FNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGYAWSQK 186

Query: 200 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG--- 256
           N+     K +     A  + P  A A       +F  G  +  ++  +  +A  N     
Sbjct: 187 ND---YDKAITDYNEAIRLDPDDASA-------YFNRGYAWSKKKDYDKTIADYNEAIRL 236

Query: 257 -PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
            P  + +Y+N A ++  K DY+K    Y  +++    P +    Y+  G    + GD   
Sbjct: 237 DPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRL--DPDD-ASAYFNRGHAWSQKGDLDK 293

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           A+ ++ + + + P N       G+ + Q G ++KA     +A ++DP DA A+++ G
Sbjct: 294 AIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVNQG 350



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 10/221 (4%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           EKEEH    T + NKA R+D      +  +G     K + ++A + F   ++ D +   A
Sbjct: 457 EKEEHDKAITDF-NKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSA 515

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
            L +      +  Y  ++  + +A+++ P + P     G    + K G   KA   +  A
Sbjct: 516 YLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQ-KEG-YDKAIADYNEA 573

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           ++LDP N  A +       +  E     K +     A  I P  A A  Y A    ++ +
Sbjct: 574 IRLDPNNALAYLNRGHARSKTQEH---DKAIADYNEAIRIDPKAANAYIYRA--ITWSRK 628

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
               + +T+   A+    P  + S+ N   ++  K DY KA
Sbjct: 629 KDYDKAITDFTEAI-RIDPKDASSHSNRGYAWSKKKDYAKA 668


>gi|440680211|ref|YP_007155006.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428677330|gb|AFZ56096.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 560

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 133/315 (42%), Gaps = 28/315 (8%)

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G AC +   G    ++E+Y +AL ++P+   A     G  R KLG +  A + + +AL +
Sbjct: 105 GNACAQ--SGDMKAAMEYYSQALSINPNFAEAY-CNRGNARSKLGDMKGAMEDYNQALSI 161

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           +P +VEA ++     LQ+ +  G   GME   +A  I P  A A     N     G    
Sbjct: 162 NPNSVEAYLSRGFARLQSGDMNG---GMEDYNQAISINPNLAEAYCNRGNARCEAGD--- 215

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-- 299
           V+   E         P  + +Y N + +    GD E A       +++ N+    I P  
Sbjct: 216 VQGAIEDCNQALRINPKLAEAYCNRSNARCESGDVEGA-------IEDCNQALR-INPKL 267

Query: 300 ---YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
              Y   G  + + GD + A+ ++ + L I P+  +  +  G    + G  + A E   +
Sbjct: 268 AEAYLNRGNARRESGDIKRAIEDYNQGLRINPNLAQAYRNRGFARCESGDFKGAIEDFNQ 327

Query: 357 AAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 415
           A +I+P  AQA+ + G     S D   A++ F  A  +          E   N G+ H  
Sbjct: 328 AIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQALRINPNYA-----EAYYNRGLAHNY 382

Query: 416 KGEFESAHQSFKDAL 430
            G+ ++  + F  AL
Sbjct: 383 SGDRQAEIEDFNQAL 397



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 136/331 (41%), Gaps = 13/331 (3%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           N+A RI+      +  +       G+VE A       L  +     A L +       G 
Sbjct: 224 NQALRINPKLAEAYCNRSNARCESGDVEGAIEDCNQALRINPKLAEAYLNRGNARRESGD 283

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
              ++E Y + L+++P+   A R   G  R + G    A + F +A++++P   +A    
Sbjct: 284 IKRAIEDYNQGLRINPNLAQAYR-NRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNR 342

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLVEQLTETALA 251
                   E+   +  +E   +A  I P Y     N    H +   +   +E   + AL 
Sbjct: 343 GFARC---ESGDFKGAIEDFNQALRINPNYAEAYYNRGLAHNYSGDRQAEIEDFNQ-ALR 398

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
           +    P  + +Y N   +    GD + A   Y  ++  IN P+     Y   G  + K G
Sbjct: 399 IN---PNLAEAYLNRGVTRRESGDVKGAIEDYNQAL-HIN-PN-LAEAYQNRGFARCKSG 452

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           DF+ A+ +  +VL I P+  E     G+  ++ G ++ A E   +A +I+P  A A+ + 
Sbjct: 453 DFKGAIEDCNQVLRINPNFAEAYLNRGNARLESGDMKGAIEDCNQALRINPNLAIAYFNR 512

Query: 372 GEL-LISSDTGAALDAFKTARTLLKKAGEEV 401
           G   L S D   A+   + A  L ++ GE V
Sbjct: 513 GAARLQSRDKKGAIADLQKASKLFQQQGEIV 543



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/367 (19%), Positives = 143/367 (38%), Gaps = 33/367 (8%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN+A  I+ +    +  +G      G+V+ A       L  +     A   ++      G
Sbjct: 189 YNQAISINPNLAEAYCNRGNARCEAGDVQGAIEDCNQALRINPKLAEAYCNRSNARCESG 248

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               ++E   +AL+++P    A  L  G  R + G + +A + + + L+++P   +A   
Sbjct: 249 DVEGAIEDCNQALRINPKLAEAY-LNRGNARRESGDIKRAIEDYNQGLRINPNLAQAYRN 307

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
                    E+   +  +E   +A  I P  A A     N  F   +    +   E    
Sbjct: 308 RGFARC---ESGDFKGAIEDFNQAIRINPNLAQA---YQNRGFARCESGDFKGAIEDFNQ 361

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQV 306
                P  + +YYN   +++  GD +       A +++ N+    I P     Y   G  
Sbjct: 362 ALRINPNYAEAYYNRGLAHNYSGDRQ-------AEIEDFNQALR-INPNLAEAYLNRGVT 413

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
           + + GD + A+ ++ + L I P+  E  +  G    + G  + A E   +  +I+P  A+
Sbjct: 414 RRESGDVKGAIEDYNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRINPNFAE 473

Query: 367 AFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
           A+++ G   L S D   A++    A            + +  N+ + +F +G      + 
Sbjct: 474 AYLNRGNARLESGDMKGAIEDCNQA------------LRINPNLAIAYFNRGAARLQSRD 521

Query: 426 FKDALGD 432
            K A+ D
Sbjct: 522 KKGAIAD 528



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 83/216 (38%), Gaps = 20/216 (9%)

Query: 220 PYCA-MALNYLANHFFFT---GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
           P C    LN+    F  T   G+  ++  + E      ++   K+    + + S H  G 
Sbjct: 27  PKCKKFTLNWTYQEFIVTTIRGKQRVIRFIQECKNCSDHNKDEKAIPVTSKSSSVHEDGG 86

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
                L     VKE  K       YY  G    + GD ++A+  + + L I P+  E   
Sbjct: 87  NTPGEL---GDVKEAIK-------YYNQGNACAQSGDMKAAMEYYSQALSINPNFAEAYC 136

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTLL 394
             G+   +LG ++ A E   +A  I+P   +A++  G   L S D    ++ +  A ++ 
Sbjct: 137 NRGNARSKLGDMKGAMEDYNQALSINPNSVEAYLSRGFARLQSGDMNGGMEDYNQAISIN 196

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                    E   N G    E G+ + A +    AL
Sbjct: 197 PNLA-----EAYCNRGNARCEAGDVQGAIEDCNQAL 227


>gi|196232458|ref|ZP_03131311.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196223530|gb|EDY18047.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 747

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 49/276 (17%)

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
           L +GL  ++ G+L +A   ++  L+  P++++AL  L V  +Q   A             
Sbjct: 8   LELGLQHHQAGRLAEAEACYREILEAQPDHLDALHLLGVAAMQTGRA------------- 54

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
                                     V  L   A  V NH    S    NL  +Y   G 
Sbjct: 55  -----------------------ELAVNLLNRVAALVPNHPAVHS----NLGEAYRGLGK 87

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
           +E+A   +  +++   KP + +   Y LG V ++ G    A+  + +VL + PD  +   
Sbjct: 88  FEEAVASFRRALQL--KPDD-VLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHN 144

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLL 394
            LG    + G + +A E+LR+A ++ P DA A+ + G +L      G A++A++ A  L 
Sbjct: 145 NLGIALARQGVMTEATEVLRRALQLAPADAGAWNNFGIVLAEQGRFGEAVEAYRRALELA 204

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                    E  NN G    E G+FESA  +++ A+
Sbjct: 205 PNQP-----EAHNNFGNACKELGQFESAVAAYRRAV 235



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/335 (22%), Positives = 143/335 (42%), Gaps = 18/335 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G + +A + ++ +LEA  D++ AL          GR   ++    R   + P+ P A+  
Sbjct: 18  GRLAEAEACYREILEAQPDHLDALHLLGVAAMQTGRAELAVNLLNRVAALVPNHP-AVHS 76

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G     LG+  +A  +F+RALQL P++V A   L  + +   E   + + +   +R  
Sbjct: 77  NLGEAYRGLGKFEEAVASFRRALQLKPDDVLAQYNLGNVLV---EWGKLEEAIAAYRRVL 133

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
            + P    A N L       G   ++ + TE         P  + ++ N       +G +
Sbjct: 134 TLKPDYVDAHNNLGIALARQG---VMTEATEVLRRALQLAPADAGAWNNFGIVLAEQGRF 190

Query: 277 EKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
            +A   Y  +++   N+P      +   G    +LG F SA+  + + +E+ PD+ E   
Sbjct: 191 GEAVEAYRRALELAPNQPEA----HNNFGNACKELGQFESAVAAYRRAVELRPDSAEFQA 246

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLL 394
            LG+   + G+ ++A    R A  + P+ A+   ++G  L       AA+ A++    L 
Sbjct: 247 NLGNGLREQGRFDEAMAAYRHALALQPKRAETHHEMGNALAGQGQLDAAVLAYRATLELK 306

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
              G         N+G +  ++G  + A  +++ A
Sbjct: 307 PDYG-----VARCNLGNVLRDQGMLDEAIAAYRRA 336



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 135/326 (41%), Gaps = 35/326 (10%)

Query: 41  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 100
           L+ LGV     G+ E           LA    N+ + +  + P+     G+     G+ E
Sbjct: 41  LHLLGVAAMQTGRAE-----------LAVNLLNRVAALVPNHPAVHSNLGEAYRGLGKFE 89

Query: 101 QASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLG 157
           +A ++F+  L+   D+V A   LG   VE+  G+  +++  Y+R L + P    A   LG
Sbjct: 90  EAVASFRRALQLKPDDVLAQYNLGNVLVEW--GKLEEAIAAYRRVLTLKPDYVDAHNNLG 147

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           I L R   G + +A +  +RALQL P +  A     ++     E     + +E  +RA E
Sbjct: 148 IALARQ--GVMTEATEVLRRALQLAPADAGAWNNFGIV---LAEQGRFGEAVEAYRRALE 202

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSK 273
           + P    A N   N     GQ        E+A+A         P  +    NL      +
Sbjct: 203 LAPNQPEAHNNFGNACKELGQF-------ESAVAAYRRAVELRPDSAEFQANLGNGLREQ 255

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G +++A   Y  ++    K  E    ++ +G      G   +A+  +   LE+ PD    
Sbjct: 256 GRFDEAMAAYRHALALQPKRAE---THHEMGNALAGQGQLDAAVLAYRATLELKPDYGVA 312

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAK 359
              LG++    G +++A    R+AA+
Sbjct: 313 RCNLGNVLRDQGMLDEAIAAYRRAAE 338



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 19/198 (9%)

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE 558
           A   YR IL    D++DA   L   A      +L++ L+N    +   +P   S LG+  
Sbjct: 23  AEACYREILEAQPDHLDALHLLGVAAMQTGRAELAVNLLNRVAALVPNHPAVHSNLGEAY 82

Query: 559 LKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKEL 618
                + +A  +FR A       D  A  +LGN               +E   LE+A   
Sbjct: 83  RGLGKFEEAVASFRRALQLKP-DDVLAQYNLGN-------------VLVEWGKLEEAIAA 128

Query: 619 YTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHV 678
           Y RV+      + A N  G+ LA +G    + ++  +  + A           W N   V
Sbjct: 129 YRRVLTLKPDYVDAHNNLGIALARQGVMTEATEVLRRALQLAPADA-----GAWNNFGIV 183

Query: 679 YFAQGNFALAMKMYQNCL 696
              QG F  A++ Y+  L
Sbjct: 184 LAEQGRFGEAVEAYRRAL 201


>gi|406912813|gb|EKD52347.1| hypothetical protein ACD_62C00048G0002 [uncultured bacterium]
          Length = 390

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 11/288 (3%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++  G  LL +     + +AF+  LE   D+    L         G+Y  ++   K+A Q
Sbjct: 43  YLNLGVSLLDQENYLDSITAFQKALEISSDSAEVHLVMGMAYDGLGQYEKAIFHLKKAGQ 102

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG- 204
           + P    A  + +GL   K+  + +A + +  AL +DP N +A   L V    A +  G 
Sbjct: 103 LSPQLSDA-HVNLGLVYLKMDNVDEAIKTYYDALMIDPVNEKAYFGLGV----AYQRMGR 157

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
             + ++    A  I P  + A N L       G     E +T   +A+         +Y 
Sbjct: 158 YEEAIDAYSEAIMISPAFSDAYNNLGIALSHVG--LYEEAITSYLIAIKIRPDLSEAAYN 215

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           NL  +Y S G  +KA   Y  ++  +  P E+   Y  LG V+ + G++  A+  +++ L
Sbjct: 216 NLGITYQSVGQDDKAVEAYTNAI--LLDP-EYTKAYCNLGHVRQQKGNYDEAMWAYQEAL 272

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           +I P   +    LG+ Y   G+ EKA +    A + +P+DA+ + +LG
Sbjct: 273 KIDPAFADAHYGLGNAYGSTGEYEKAADSYLLAIRHNPKDARTYFNLG 320



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 45/243 (18%)

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
           Y DS+  +++AL++  S    + L +G+    LGQ  KA    ++A QL P+  +A V L
Sbjct: 56  YLDSITAFQKALEI-SSDSAEVHLVMGMAYDGLGQYEKAIFHLKKAGQLSPQLSDAHVNL 114

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
            ++ L+          M+ +  A + Y Y A+ ++                         
Sbjct: 115 GLVYLK----------MDNVDEAIKTY-YDALMID------------------------- 138

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
               P    +Y+ L  +Y   G YE+A   Y  ++  +  P  F   Y  LG     +G 
Sbjct: 139 ----PVNEKAYFGLGVAYQRMGRYEEAIDAYSEAI--MISP-AFSDAYNNLGIALSHVGL 191

Query: 313 FRSALTNFEKVLEIYPDNCET-LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           +  A+T++   ++I PD  E     LG  Y  +GQ +KA E    A  +DP   +A+ +L
Sbjct: 192 YEEAITSYLIAIKIRPDLSEAAYNNLGITYQSVGQDDKAVEAYTNAILLDPEYTKAYCNL 251

Query: 372 GEL 374
           G +
Sbjct: 252 GHV 254



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 15/310 (4%)

Query: 286 SVKEINKPHEFIFPYY-GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
             +E  +P +  F +Y  LG   L   ++  ++T F+K LEI  D+ E    +G  Y  L
Sbjct: 28  GAEETQEPIDRDFTHYLNLGVSLLDQENYLDSITAFQKALEISSDSAEVHLVMGMAYDGL 87

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 404
           GQ EKA   L+KA ++ P+ + A ++LG + +  D     +A KT    L    + V  +
Sbjct: 88  GQYEKAIFHLKKAGQLSPQLSDAHVNLGLVYLKMDN--VDEAIKTYYDALMI--DPVNEK 143

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 464
               +GV +   G +E A  ++ +A+   I     D+     +  +   + +        
Sbjct: 144 AYFGLGVAYQRMGRYEEAIDAYSEAI--MISPAFSDAYNNLGIALSHVGLYEEAITSYLI 201

Query: 465 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
             +   +  E  +N + + +          D  A       IL    +Y  AY  L  + 
Sbjct: 202 AIKIRPDLSEAAYNNLGITYQSVG-----QDDKAVEAYTNAILLD-PEYTKAYCNLGHVR 255

Query: 525 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 584
           + + N   ++    EALK++  + +A   LG+      ++ KA +++  A    + KD+ 
Sbjct: 256 QQKGNYDEAMWAYQEALKIDPAFADAHYGLGNAYGSTGEYEKAADSYLLAI-RHNPKDAR 314

Query: 585 ATLSLGNWNY 594
              +LG W+Y
Sbjct: 315 TYFNLG-WSY 323



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 120/299 (40%), Gaps = 11/299 (3%)

Query: 74  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
           KA ++        V  G + L    V++A   +   L  D  N  A  G        GRY
Sbjct: 99  KAGQLSPQLSDAHVNLGLVYLKMDNVDEAIKTYYDALMIDPVNEKAYFGLGVAYQRMGRY 158

Query: 134 SDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
            ++++ Y  A+ + P+   A   LGI L    +G   +A  ++  A+++ P+  EA  A 
Sbjct: 159 EEAIDAYSEAIMISPAFSDAYNNLGIALSH--VGLYEEAITSYLIAIKIRPDLSEA--AY 214

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
             + +         K +E    A  + P    A   L +     G +       + AL +
Sbjct: 215 NNLGITYQSVGQDDKAVEAYTNAILLDPEYTKAYCNLGHVRQQKGNYDEAMWAYQEALKI 274

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
               P  + ++Y L  +Y S G+YEKA   Y+ +++   K       Y+ LG    KLG 
Sbjct: 275 D---PAFADAHYGLGNAYGSTGEYEKAADSYLLAIRHNPKDAR---TYFNLGWSYGKLGQ 328

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
               L  + + + +  D  +     G +Y++ G  + A++       +D + A +  +L
Sbjct: 329 LDKELDAYNQAISLKQDYAKAYLGRGLVYLKNGHKDMARQEYDVLKNLDAKMASSLYEL 387


>gi|124022007|ref|YP_001016314.1| hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962293|gb|ABM77049.1| Hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT
           9303]
          Length = 594

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 125/280 (44%), Gaps = 14/280 (5%)

Query: 96  KGEVEQASSAFKIVLEAD--RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
           +G++E A   ++  +E     + + + LG  C   N  R  +++  Y++A++  P  P A
Sbjct: 44  QGDIENAEYLYRQAIEIGFLHEAIFSNLGVICK--NSDRQEEAIALYEKAIETRPDHPDA 101

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 213
            R  +G    +LG L +A  A  ++L+L P+N +A + L  +     E   + + +    
Sbjct: 102 YR-NLGNLHKELGNLDQALAATLKSLELKPDNPDAHINLGGI---YKELGNLDQALTSTL 157

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
           ++ E+ P    A   L   +   G    ++Q   + L      P    ++ NL   Y   
Sbjct: 158 KSLELKPDNPTAYMNLGRIYQDLGN---LDQALASTLKSLELKPDNPTAHMNLGIIYRDL 214

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
            + ++A    + S++   KP      Y  LG +   LG+   AL +  K LE+ PDN  T
Sbjct: 215 RNLDQALASSLQSLQL--KPDNHT-AYINLGVIYQDLGNLDQALASTLKSLELKPDNPTT 271

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
              L  IY  LG  ++A   LR+A K D   A+A I L +
Sbjct: 272 QMNLASIYKDLGNFDQALYFLREAEKNDEMKAKASILLAQ 311



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 33/140 (23%)

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--------------------------- 299
           A ++H +GD E A   Y  ++ EI   HE IF                            
Sbjct: 38  AMNFHMQGDIENAEYLYRQAI-EIGFLHEAIFSNLGVICKNSDRQEEAIALYEKAIETRP 96

Query: 300 -----YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
                Y  LG +  +LG+   AL    K LE+ PDN +    LG IY +LG +++A    
Sbjct: 97  DHPDAYRNLGNLHKELGNLDQALAATLKSLELKPDNPDAHINLGGIYKELGNLDQALTST 156

Query: 355 RKAAKIDPRDAQAFIDLGEL 374
            K+ ++ P +  A+++LG +
Sbjct: 157 LKSLELKPDNPTAYMNLGRI 176



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 16/239 (6%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           ++ LG I      +EE    A   Y KA       P  +   G L    G ++QA +A  
Sbjct: 68  FSNLGVICKNSDRQEE----AIALYEKAIETRPDHPDAYRNLGNLHKELGNLDQALAATL 123

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             LE   DN  A +    +    G    +L    ++L++ P  P A  + +G     LG 
Sbjct: 124 KSLELKPDNPDAHINLGGIYKELGNLDQALTSTLKSLELKPDNPTAY-MNLGRIYQDLGN 182

Query: 168 LGKARQAFQRALQLDPENVEALVALAVM--DLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           L +A  +  ++L+L P+N  A + L ++  DL+      + + +    ++ ++ P    A
Sbjct: 183 LDQALASTLKSLELKPDNPTAHMNLGIIYRDLR-----NLDQALASSLQSLQLKPDNHTA 237

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
              L   +   G    ++Q   + L      P    +  NLA  Y   G++++A LY++
Sbjct: 238 YINLGVIYQDLGN---LDQALASTLKSLELKPDNPTTQMNLASIYKDLGNFDQA-LYFL 292


>gi|395212900|ref|ZP_10400010.1| hypothetical protein O71_04708 [Pontibacter sp. BAB1700]
 gi|394456977|gb|EJF11191.1| hypothetical protein O71_04708 [Pontibacter sp. BAB1700]
          Length = 437

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 131/305 (42%), Gaps = 14/305 (4%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQACVEFNR 130
           ++ + ++   P   + +G +   +GE   A   FK  +    DRD++   +G     +  
Sbjct: 90  DQVAEVEPQNPDVLLTRGIIFTQRGEYRDAVDHFKKALAFAEDRDDIYFNIGLTYQSW-- 147

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G++S ++++YK+ ++++     A++  I  C    G + +    FQ  +  DP +  A  
Sbjct: 148 GKFSSAVKYYKKCIELNVENEAAMQ-EIIYCMEITGTMREELPFFQAFIDKDPYSYVAWF 206

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
            L  +    N+     K +     A  I P    A N +AN + F G++    +  E   
Sbjct: 207 NLGNV---YNKLGSYEKAIAAYDYATIIKPDFITAYNNMANAYVFIGEY---TKAIEAFN 260

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
            +  HG   +  + N+   Y     ++ +  YY    K I+   E    ++G+G V    
Sbjct: 261 GMLEHGSPSAEVFCNIGECYEKMQQWDLSRRYYQ---KAIDLDPEMDEAWFGIGVVLDAQ 317

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G +  ++  F+K + +Y D+ +   AL      +G +  A E   +AA+I P D   +++
Sbjct: 318 GKWYESVHFFKKAVTLYDDSVDYWVALASAEYHVGHVVSALESYARAAEIQPEDKDIYLN 377

Query: 371 LGELL 375
              +L
Sbjct: 378 WSIIL 382



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           EK + + L+ +YY KA  +D      W G G +L A+G+  ++   FK  +    D+V  
Sbjct: 281 EKMQQWDLSRRYYQKAIDLDPEMDEAWFGIGVVLDAQGKWYESVHFFKKAVTLYDDSVDY 340

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
            +  A  E++ G    +LE Y RA ++ P     I L   +  Y+ G   +A +    A+
Sbjct: 341 WVALASAEYHVGHVVSALESYARAAEIQPE-DKDIYLNWSIILYEQGNFEEATEIILNAI 399

Query: 180 QLDPENVEALVALAV 194
           +L P+  E    LA+
Sbjct: 400 ELQPDEAELYYRLAL 414



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 47/224 (20%)

Query: 263 YYNLARSYHSKGDYEKAGLYYM----------ASVKEI---------------------- 290
           Y+N+  +Y S G +  A  YY           A+++EI                      
Sbjct: 137 YFNIGLTYQSWGKFSSAVKYYKKCIELNVENEAAMQEIIYCMEITGTMREELPFFQAFID 196

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
             P+ ++  ++ LG V  KLG +  A+  ++    I PD       + + YV +G+  KA
Sbjct: 197 KDPYSYV-AWFNLGNVYNKLGSYEKAIAAYDYATIIKPDFITAYNNMANAYVFIGEYTKA 255

Query: 351 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNN 408
            E      +     A+ F ++GE          +  +  +R   +KA +  P   E    
Sbjct: 256 IEAFNGMLEHGSPSAEVFCNIGECY------EKMQQWDLSRRYYQKAIDLDPEMDEAWFG 309

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 452
           IGV+   +G++  +   FK A      +TL D     +V  ASA
Sbjct: 310 IGVVLDAQGKWYESVHFFKKA------VTLYDDSVDYWVALASA 347


>gi|348526600|ref|XP_003450807.1| PREDICTED: Bardet-Biedl syndrome 4 protein [Oreochromis niloticus]
          Length = 534

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           I++ +E  Q    + P  A  L  +A   F  G+H    +    A  +  +    SH   
Sbjct: 81  IQQSLELFQSCAILNPNSADNLKQVARSLFLLGKHKAAIEFYHEAARLNENDWEISH--- 137

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           NL   Y    D++ A  +   ++K INK H+  F    LG+V L  G+   A+  ++K +
Sbjct: 138 NLGLCYFFIKDFKNAEEHLKIALK-INK-HDKTF--MMLGKVHLLAGETDKAIEVYKKAV 193

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAA 383
           E  P+N E L  LG +++QLG+ +KA E L  A   DP + +A +  G ++    D   A
Sbjct: 194 EFSPENTEILTTLGLLFLQLGKYQKAFEHLGNALTFDPNNYKAILAAGSMMQTHGDFDVA 253

Query: 384 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           ++ ++ A      A  E P  + NNIG+  F K ++ +A    K A
Sbjct: 254 MNKYRVAAC----AVPESP-PLWNNIGMCFFGKKKYVAAISCLKRA 294



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 119/289 (41%), Gaps = 39/289 (13%)

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD-ATDGKDSYATLSLGNWNYFAAL 598
           ALK+N K+     MLG + L   +  KA E ++ A + + +  +   TL L     F   
Sbjct: 159 ALKIN-KHDKTFMMLGKVHLLAGETDKAIEVYKKAVEFSPENTEILTTLGL----LF--- 210

Query: 599 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 658
                   L+    +KA E     +    +N  A   AG ++   G FDV+ + +     
Sbjct: 211 --------LQLGKYQKAFEHLGNALTFDPNNYKAILAAGSMMQTHGDFDVAMNKYRVAAC 262

Query: 659 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT--DAQILLYLARTHY 716
           A   S     P +W N+   +F +  +  A+    +CL++ +Y +  D ++L  L   H 
Sbjct: 263 AVPES-----PPLWNNIGMCFFGKKKYVAAI----SCLKRAHYLSPFDWKVLYNLGLVHL 313

Query: 717 EAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF----SASTLQKTRRTADEVRSTVA 772
             +Q+      L  AI+L P    L     VA+       +A+   +   T DE    V 
Sbjct: 314 TMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNLEDVENATRSYEQAVTLDESNPLV- 372

Query: 773 ELENAVRVFSHLSAASNLHLHGFDEKKIN------THVEYCKHLLDAAK 815
            L  A+ +++H      L  +   E+K+N      ++ E+   L+D A+
Sbjct: 373 NLNFAIFLYNHGDKKGALDQYQEMERKVNILRDSSSNFEFDPELMDMAQ 421



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 66/352 (18%), Positives = 127/352 (36%), Gaps = 86/352 (24%)

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           +L  +GE++Q+   F+     + ++   L   A   F  G++  ++EFY  A +++ +  
Sbjct: 74  ILRLEGEIQQSLELFQSCAILNPNSADNLKQVARSLFLLGKHKAAIEFYHEAARLNEN-D 132

Query: 152 GAIRLGIGLCRYKL---------------------------------GQLGKARQAFQRA 178
             I   +GLC + +                                 G+  KA + +++A
Sbjct: 133 WEISHNLGLCYFFIKDFKNAEEHLKIALKINKHDKTFMMLGKVHLLAGETDKAIEVYKKA 192

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           ++  PEN E L  L ++ LQ          + K Q+AFE          +L N   F   
Sbjct: 193 VEFSPENTEILTTLGLLFLQ----------LGKYQKAFE----------HLGNALTFDPN 232

Query: 239 HFLVEQLTETALAVTNHG----------------PTKSHSYYNLARSYHSKGDYEKAGLY 282
           ++  + +      +  HG                P     + N+   +  K         
Sbjct: 233 NY--KAILAAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKK------- 283

Query: 283 YMASVKEINKPHEFIFPY-----YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           Y+A++  + + H ++ P+     Y LG V L +  + SA       + + P   E    L
Sbjct: 284 YVAAISCLKRAH-YLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAAINLNPRMGELYMLL 342

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFK 388
                 L  +E A     +A  +D  +    ++    L +  D   ALD ++
Sbjct: 343 AVALTNLEDVENATRSYEQAVTLDESNPLVNLNFAIFLYNHGDKKGALDQYQ 394


>gi|398805153|ref|ZP_10564134.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Polaromonas sp. CF318]
 gi|398092315|gb|EJL82730.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Polaromonas sp. CF318]
          Length = 733

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 26/282 (9%)

Query: 89  KGQLLLAKGEVEQA----SSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
           +G  L  +G+ E+A     SA  ++ E  R    A   +  +  +RG    +LE + +A+
Sbjct: 35  QGMALEQQGQPEEALLRYDSAIALMPELAR----AHFNRGTILLDRGDAQQALEAFTKAV 90

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL-AVMDLQANEAA 203
           Q  P   GA    +G    +L Q   A  A+++AL L P+  EA +AL A ++ Q  +  
Sbjct: 91  QYKPDSAGA-HFNLGAAYSRLDQHEAAMSAYRQALSLKPDFAEAEMALGAALEEQGRDEE 149

Query: 204 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA---VTNHGPTKS 260
            +R      +RA EI P  A A + LA           ++Q  E A     +    P   
Sbjct: 150 AVRS----YRRALEIQPGYAEAQDKLAYSLV------RLDQFDEAAACFRRILVRDPHNV 199

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
            +  +L    + KG + +A   Y  +VK   KP +F+  +  LG V + L  F  A  ++
Sbjct: 200 EALNSLGLLLNIKGQFHEAVSQYRLAVKL--KP-DFLAAHGNLGNVLMDLHQFSDAAASY 256

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            +VLE+ PD+ +    LG  +  LG ++KA    RKA  + P
Sbjct: 257 HRVLELNPDSADAYNNLGSAFKDLGDLDKALASYRKAMTLKP 298



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 27/206 (13%)

Query: 243 EQLTETALAVTNHG----------------PTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
           EQL E  +A+   G                P  + +++N       +GD ++A     A 
Sbjct: 30  EQLLEQGMALEQQGQPEEALLRYDSAIALMPELARAHFNRGTILLDRGDAQQA---LEAF 86

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
            K +    +    ++ LG    +L    +A++ + + L + PD  E   ALG    + G+
Sbjct: 87  TKAVQYKPDSAGAHFNLGAAYSRLDQHEAAMSAYRQALSLKPDFAEAEMALGAALEEQGR 146

Query: 347 IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IE 404
            E+A    R+A +I P  A+A   L   L+       LD F  A    ++     P  +E
Sbjct: 147 DEEAVRSYRRALEIQPGYAEAQDKLAYSLVR------LDQFDEAAACFRRILVRDPHNVE 200

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDAL 430
            LN++G++   KG+F  A   ++ A+
Sbjct: 201 ALNSLGLLLNIKGQFHEAVSQYRLAV 226



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 120/316 (37%), Gaps = 74/316 (23%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
           ++ K      HF L   Y    SR+D HE                   A SA++  L   
Sbjct: 90  VQYKPDSAGAHFNLGAAY----SRLDQHE------------------AAMSAYRQALSLK 127

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKAR 172
            D   A +        +GR  +++  Y+RAL++ P    A  +L   L R  L Q  +A 
Sbjct: 128 PDFAEAEMALGAALEEQGRDEEAVRSYRRALEIQPGYAEAQDKLAYSLVR--LDQFDEAA 185

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 232
             F+R L  DP NVEAL +L ++    N      + + + + A ++ P      ++LA H
Sbjct: 186 ACFRRILVRDPHNVEALNSLGLL---LNIKGQFHEAVSQYRLAVKLKP------DFLAAH 236

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
                       L    + +        H + + A SYH               V E+N 
Sbjct: 237 ----------GNLGNVLMDL--------HQFSDAAASYHR--------------VLELNP 264

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD----NCETLKALGHIYVQLGQ-- 346
             +    Y  LG     LGD   AL ++ K + + PD    +   L    ++  Q  Q  
Sbjct: 265 --DSADAYNNLGSAFKDLGDLDKALASYRKAMTLKPDLLVAHSNLLMVQNYLSEQPPQEL 322

Query: 347 IEKAQELLRKAAKIDP 362
           +E+A+     AA++ P
Sbjct: 323 VEEARRFGETAARLAP 338


>gi|341897224|gb|EGT53159.1| CBN-OGT-1 protein [Caenorhabditis brenneri]
          Length = 1171

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 199/472 (42%), Gaps = 31/472 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G   +A     +V + D+ N+P LL  + + F       S+ +   A++V+P+C  A   
Sbjct: 155 GNYAEAEKYCNLVFQTDQQNLPTLLLLSAINFQTKNLEKSMHYSLMAIKVNPNCAEAYS- 213

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + G L +A + ++ A++L PE ++A + LA   +   +   + + +     A 
Sbjct: 214 NLGNYYKEKGHLAEALEHYRTAVKLKPEFIDAYINLAAALVSGGD---LEQAVNAYFNAL 270

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
            I P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++S+G
Sbjct: 271 AINPDLYCVRS--DLGNLLKAMGK---LEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQG 325

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A++ + + L ++ ++    
Sbjct: 326 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALNLHGNHAVVH 382

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  +KA ++ P    A+ +L   L   + G      + A    
Sbjct: 383 GNLACVYYEQGLIDLAIDTYKKAIELQPIFPDAYCNLANAL--KEKGC----IQEAEEAY 436

Query: 395 KKAGEEVPIEV--LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 452
            KA E  P      NN+  I  E+G+ E A + +  AL   I+     + +        A
Sbjct: 437 LKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALE--IYPEFAAAHSNL------A 488

Query: 453 SMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQD 512
           S+LQ +  +L     +    + +         N+   L+++ D+ AA   Y   +     
Sbjct: 489 SILQ-QQGKLSEAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPA 547

Query: 513 YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
           + DA+  LA+I K   N+  +I+  N ALK+   +P+A   L        DW
Sbjct: 548 FADAHSNLASIHKDAGNMAEAIQSYNTALKLKPDFPDAFCNLAHCLQIICDW 599



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 102/454 (22%), Positives = 187/454 (41%), Gaps = 41/454 (9%)

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
           +++ G   +A +      Q D +N+  L+ L+ ++ Q      + K M     A ++ P 
Sbjct: 151 QFQAGNYAEAEKYCNLVFQTDQQNLPTLLLLSAINFQTKN---LEKSMHYSLMAIKVNPN 207

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
           CA A + L N++   G   L E L     AV    P    +Y NLA +  S GD E+A  
Sbjct: 208 CAEAYSNLGNYYKEKGH--LAEALEHYRTAV-KLKPEFIDAYINLAAALVSGGDLEQAVN 264

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
            Y  ++  IN   +       LG +   +G    A   + K +E  P        LG ++
Sbjct: 265 AYFNALA-INP--DLYCVRSDLGNLLKAMGKLEEAKVCYLKAIETQPQFAVAWSNLGCVF 321

Query: 342 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEE 400
              G+I  A     KA  +DP    A+I+LG +L  +     A+ A+  A  L       
Sbjct: 322 NSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALNL--HGNHA 379

Query: 401 VPIEVLNNIGVIHFEKGEFESAHQSFKDALG-----DGIWLTLLDS-KTKTYVIDASASM 454
           V   V  N+  +++E+G  + A  ++K A+         +  L ++ K K  + +A  + 
Sbjct: 380 V---VHGNLACVYYEQGLIDLAIDTYKKAIELQPIFPDAYCNLANALKEKGCIQEAEEAY 436

Query: 455 LQFKDMQLFHR-FENDGNHVELPWNKV---TVLF---------------NLARLLEQIHD 495
           L+  ++   H   +N+  +++    K+   T L+               NLA +L+Q   
Sbjct: 437 LKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGK 496

Query: 496 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
              A + Y+  +     + DAY  +    K   +   +I   N A+++N  + +A S L 
Sbjct: 497 LSEAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFADAHSNLA 556

Query: 556 DLELKNDDWVKAKETFRAASDA-TDGKDSYATLS 588
            +     +  +A +++  A     D  D++  L+
Sbjct: 557 SIHKDAGNMAEAIQSYNTALKLKPDFPDAFCNLA 590



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 157/375 (41%), Gaps = 30/375 (8%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF--KIVLEADRDNVPALL 121
           H   A ++Y  A ++       ++     L++ G++EQA +A+   + +  D   V + L
Sbjct: 224 HLAEALEHYRTAVKLKPEFIDAYINLAAALVSGGDLEQAVNAYFNALAINPDLYCVRSDL 283

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G        G+  ++   Y +A++  P    A    +G      G++  A   F++A+ L
Sbjct: 284 GNLLKAM--GKLEEAKVCYLKAIETQPQFAVAWS-NLGCVFNSQGEIWLAIHHFEKAVTL 340

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           DP  ++A + L  +     EA    + +    RA  ++   A+    LA  ++  G   L
Sbjct: 341 DPNFLDAYINLGNV---LKEARIFDRAVSAYLRALNLHGNHAVVHGNLACVYYEQG---L 394

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
           ++   +T        P    +Y NLA +   KG  ++A   Y+ +++        + P +
Sbjct: 395 IDLAIDTYKKAIELQPIFPDAYCNLANALKEKGCIQEAEEAYLKALE--------LCPTH 446

Query: 302 G-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
                 L  ++ + G    A   + K LEIYP+       L  I  Q G++ +A    ++
Sbjct: 447 ADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLSEAILHYKE 506

Query: 357 AAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 415
           A +I P  A A+ ++G  L    D+ AA+  +  A  +          +  +N+  IH +
Sbjct: 507 AIRIAPTFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFA-----DAHSNLASIHKD 561

Query: 416 KGEFESAHQSFKDAL 430
            G    A QS+  AL
Sbjct: 562 AGNMAEAIQSYNTAL 576



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 48/332 (14%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 310 FAVAWSNLGCVFNSQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 365

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           SA+   L    ++       ACV + +G    +++ YK+A+++ P  P A    +     
Sbjct: 366 SAYLRALNLHGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIELQPIFPDA-YCNLANALK 424

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + G + +A +A+ +AL+L P + ++   LA +     E   I        +A EIYP  A
Sbjct: 425 EKGCIQEAEEAYLKALELCPTHADSQNNLANIK---REQGKIEDATRLYLKALEIYPEFA 481

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A                                   HS  NLA     +G   +A L+Y
Sbjct: 482 AA-----------------------------------HS--NLASILQQQGKLSEAILHY 504

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++       F   Y  +G    ++GD  +A+  + + ++I P   +    L  I+  
Sbjct: 505 KEAIRIAPT---FADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFADAHSNLASIHKD 561

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            G + +A +    A K+ P    AF +L   L
Sbjct: 562 AGNMAEAIQSYNTALKLKPDFPDAFCNLAHCL 593



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 129/307 (42%), Gaps = 14/307 (4%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G LL A G++E+A   +   +E       A     CV  ++G    ++  +++A+ + P+
Sbjct: 284 GNLLKAMGKLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPN 343

Query: 150 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
              A I LG  L   ++    +A  A+ RAL L   +      LA +     E   I   
Sbjct: 344 FLDAYINLGNVLKEARI--FDRAVSAYLRALNLHGNHAVVHGNLACVYY---EQGLIDLA 398

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
           ++  ++A E+ P    A   LAN     G    +++  E  L      PT + S  NLA 
Sbjct: 399 IDTYKKAIELQPIFPDAYCNLANALKEKG---CIQEAEEAYLKALELCPTHADSQNNLAN 455

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
               +G  E A   Y+ ++ EI    EF   +  L  +  + G    A+ ++++ + I P
Sbjct: 456 IKREQGKIEDATRLYLKAL-EIYP--EFAAAHSNLASILQQQGKLSEAILHYKEAIRIAP 512

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
              +    +G+   ++G    A     +A +I+P  A A  +L    I  D G   +A +
Sbjct: 513 TFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFADAHSNLAS--IHKDAGNMAEAIQ 570

Query: 389 TARTLLK 395
           +  T LK
Sbjct: 571 SYNTALK 577


>gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
           (Trigonal Crystal Form)
 gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
           (Orthorombic Crystal Form)
          Length = 136

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           + ++YNL  +Y+ +GDY++A  YY  +++   +  E    +Y LG    K GD+  A+  
Sbjct: 1   AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE---AWYNLGNAYYKQGDYDEAIEY 57

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SS 378
           ++K LE+ P + E    LG+ Y + G  ++A E  +KA ++DPR A+A+ +LG       
Sbjct: 58  YQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG 117

Query: 379 DTGAALDAFKTARTL 393
           D   A++ ++ A  L
Sbjct: 118 DYDEAIEYYQKALEL 132



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 6/132 (4%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y LG    K GD+  A+  ++K LE+ P + E    LG+ Y + G  ++A E  +KA +
Sbjct: 4   WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 63

Query: 360 IDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
           +DPR A+A+ +LG       D   A++ ++ A  L  ++      E   N+G  ++++G+
Sbjct: 64  LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA-----EAWYNLGNAYYKQGD 118

Query: 419 FESAHQSFKDAL 430
           ++ A + ++ AL
Sbjct: 119 YDEAIEYYQKAL 130



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 6/135 (4%)

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
           L N ++  G +    +  + AL +    P  + ++YNL  +Y+ +GDY++A  YY  +++
Sbjct: 7   LGNAYYKQGDYDEAIEYYQKALELD---PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 63

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              +  E    +Y LG    K GD+  A+  ++K LE+ P + E    LG+ Y + G  +
Sbjct: 64  LDPRSAE---AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYD 120

Query: 349 KAQELLRKAAKIDPR 363
           +A E  +KA ++DPR
Sbjct: 121 EAIEYYQKALELDPR 135



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 5/133 (3%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LG    KQ + +E    A +YY KA  +D      W   G     +G+ ++A   ++  L
Sbjct: 7   LGNAYYKQGDYDE----AIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKAL 62

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           E D  +  A        + +G Y +++E+Y++AL++ P    A    +G   YK G   +
Sbjct: 63  ELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAW-YNLGNAYYKQGDYDE 121

Query: 171 ARQAFQRALQLDP 183
           A + +Q+AL+LDP
Sbjct: 122 AIEYYQKALELDP 134



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 4/136 (2%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W   G     +G+ ++A   ++  LE D  +  A        + +G Y +++E+Y++AL
Sbjct: 3   AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKAL 62

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           ++ P    A    +G   YK G   +A + +Q+AL+LDP + EA   L     +  +   
Sbjct: 63  ELDPRSAEAW-YNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD--- 118

Query: 205 IRKGMEKMQRAFEIYP 220
             + +E  Q+A E+ P
Sbjct: 119 YDEAIEYYQKALELDP 134


>gi|376005011|ref|ZP_09782581.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
 gi|375326605|emb|CCE18334.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
          Length = 530

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 149/341 (43%), Gaps = 47/341 (13%)

Query: 72  YNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADR------DNVPALLGQ 123
           YN+A  I     S W     G+ L  +G++++A +A++   E +       DN+  LL Q
Sbjct: 25  YNQA--IAASPKSAWYYHNLGEALSQQGKIDEAIAAYRQATELNPNSAWSYDNLGTLLNQ 82

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
                 +G   +++  +++A+++ P         + L   K G   +A    Q+A++L  
Sbjct: 83  ------QGNLPEAVRCFRQAIELDPYF-WQFYHNLALVLIKQGHPEEAVSLLQKAIELTA 135

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY---CAMALNYLANHFFFTGQHF 240
           ++ E   +L     Q  + +   + +   ++  E+ PY   C M+L          GQ  
Sbjct: 136 DDAELYHSLGKAYHQQQQYS---EAVTAYRQGLELNPYWSDCYMSL----------GQ-- 180

Query: 241 LVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEK-AGLYYMASVKEINKP 293
            +E L ET  A+ ++       P  S +   L     S+G +E+ A LY    + + N  
Sbjct: 181 TLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSA 240

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
               +    LG      G    A  +++K LE+ P+  E L+ LG +  QL Q E A ++
Sbjct: 241 TSHKY----LGTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAVDI 296

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 393
            RKA ++DP  A  +  LG+ L   D    AL A++ A  L
Sbjct: 297 FRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASEL 337



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 158/361 (43%), Gaps = 20/361 (5%)

Query: 16  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 75
           Q+L +G   ++DE  A    + IA       YY  LG+  ++Q + +E    A   Y +A
Sbjct: 11  QLLRKG---QLDEAIASYN-QAIAASPKSAWYYHNLGEALSQQGKIDE----AIAAYRQA 62

Query: 76  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 135
           + ++ +   ++   G LL  +G + +A   F+  +E D          A V   +G   +
Sbjct: 63  TELNPNSAWSYDNLGTLLNQQGNLPEAVRCFRQAIELDPYFWQFYHNLALVLIKQGHPEE 122

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
           ++   ++A+++  +    +   +G   ++  Q  +A  A+++ L+L+P   +  ++L   
Sbjct: 123 AVSLLQKAIEL-TADDAELYHSLGKAYHQQQQYSEAVTAYRQGLELNPYWSDCYMSLG-- 179

Query: 196 DLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
             Q  EA G   + +   +RA+E+ P  + AL  L       G+   +  L      V  
Sbjct: 180 --QTLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDP 237

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
           +  T SH Y  L  +  + G   +A   Y  +++      E + P   LGQV  +L  + 
Sbjct: 238 NSAT-SHKY--LGTALANSGKLSEAAESYQKALELDPNLVEILQP---LGQVLTQLNQWE 291

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           +A+  F K  ++ P++      LG    +  ++ +A    +KA+++ P       DLG+ 
Sbjct: 292 AAVDIFRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASELHPTSTPVLFDLGQA 351

Query: 375 L 375
           L
Sbjct: 352 L 352



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 147/362 (40%), Gaps = 47/362 (12%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LGK   +Q++  E    A   Y +   ++ +    ++  GQ L A GE E+A ++++
Sbjct: 141 YHSLGKAYHQQQQYSE----AVTAYRQGLELNPYWSDCYMSLGQTLEALGETEEAIASYR 196

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLG 166
              E + +   AL     V  ++GR+ +    Y+R   V P+   + + LG  L     G
Sbjct: 197 RAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSHKYLGTALANS--G 254

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
           +L +A +++Q+AL+LDP  VE L  L  +  Q N+       ++  ++A ++ P  A   
Sbjct: 255 KLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQ---WEAAVDIFRKATQVDPNSASFY 311

Query: 227 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS----YH---SKGDYEKA 279
           + L      T    L E L     A   H PT +   ++L ++    YH   +   Y+KA
Sbjct: 312 HQLGQ--ALTKCDRLSEALAAYQKASELH-PTSTPVLFDLGQALTKLYHWSEAIATYQKA 368

Query: 280 GLYYMASVKEI---------------------NKPHEFIFP-----YYGLGQVQLKLGDF 313
                 +  EI                     ++ HEF  P     Y    Q     G  
Sbjct: 369 LYLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSESHEF-HPNSSESYEKFAQFLRSKGKI 427

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
             A+  F +   + P +      LG+   +  + ++A    RKA +++P        LG+
Sbjct: 428 EDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAIIAYRKAGELNPHSPHVQYHLGQ 487

Query: 374 LL 375
            L
Sbjct: 488 AL 489


>gi|392411117|ref|YP_006447724.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390624253|gb|AFM25460.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 487

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 139/339 (41%), Gaps = 32/339 (9%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G++ +A   +   +E D     AL  +    +  G Y  +++ Y RA++++P        
Sbjct: 74  GKLNEAVQDYSKAIEIDPRMETALNNRGSAYYRLGEYDRAIKDYGRAIELNP-------- 125

Query: 157 GIGLCRYKL-------GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
           G GL  Y         GQ  K+ + F RA+Q+DP + +         LQ NE   I K +
Sbjct: 126 GYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQVNE---IDKSI 182

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           E   RA ++ P   +A     N    +G    VE   +         P  + +Y     +
Sbjct: 183 EDFDRAIQLDPNYVLAYANRGNARLKSGN---VEGAIQDLSRAIELNPEFATAYLQRGNA 239

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
           Y  KG  ++A   Y  +V+          PY   G V  K G+   AL +  K + + P+
Sbjct: 240 YVRKGLLDEALNDYNKAVR---ISPILADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPE 296

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
             +     G I+  +G+  KA     +A ++DP  A  ++   E L+S      +     
Sbjct: 297 LSKAYTNRGWIHKSIGECPKALPDFDRALELDPSAAAIYVFRAECLLS------MHQTDR 350

Query: 390 ARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSF 426
           AR+ L KA    P   E+L  +G +    G++ +A + F
Sbjct: 351 ARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMF 389



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 149/384 (38%), Gaps = 56/384 (14%)

Query: 45  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 104
           GV +  LGK+             A Q Y+KA  ID    +    +G      GE ++A  
Sbjct: 67  GVSHERLGKLNE-----------AVQDYSKAIEIDPRMETALNNRGSAYYRLGEYDRAIK 115

Query: 105 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
            +   +E +     A   +      +G++  S+E + RA+Q+ P          G    +
Sbjct: 116 DYGRAIELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYN-NRGWAYLQ 174

Query: 165 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
           + ++ K+ + F RA+QLDP  V A        L++    G    ++ + RA E+ P  A 
Sbjct: 175 VNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNVEG---AIQDLSRAIELNPEFAT 231

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
           A  YL     +  +  L E L +   AV    P  +  Y N    +  KG+  +A L  +
Sbjct: 232 A--YLQRGNAYVRKGLLDEALNDYNKAV-RISPILADPYNNRGWVFFKKGNIAQA-LRDV 287

Query: 285 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE-------IY---------- 327
           +    +N   E    Y   G +   +G+   AL +F++ LE       IY          
Sbjct: 288 SKAVSLNP--ELSKAYTNRGWIHKSIGECPKALPDFDRALELDPSAAAIYVFRAECLLSM 345

Query: 328 -----------------PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
                            P N E L+ LG +    G    A E+  K   + P D+ A +D
Sbjct: 346 HQTDRARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFTKLVDLRPNDSAAHVD 405

Query: 371 LGELLISSDTGA-ALDAFKTARTL 393
           LG  L  S + A A++ F  A  L
Sbjct: 406 LGMALGKSGSLARAVEEFTRAIQL 429



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 103/268 (38%), Gaps = 60/268 (22%)

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PT 258
           + + ++   +A EI P    ALN   + ++         +L E   A+ ++G      P 
Sbjct: 76  LNEAVQDYSKAIEIDPRMETALNNRGSAYY---------RLGEYDRAIKDYGRAIELNPG 126

Query: 259 KSHSYYNLARSYHSKGDYEKA---------------------GLYYMASVKEINKPHE-- 295
              +YYN   +YH KG +EK+                     G  Y+  V EI+K  E  
Sbjct: 127 YGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNNRGWAYL-QVNEIDKSIEDF 185

Query: 296 ---------FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
                    ++  Y   G  +LK G+   A+ +  + +E+ P+        G+ YV+ G 
Sbjct: 186 DRAIQLDPNYVLAYANRGNARLKSGNVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGL 245

Query: 347 IEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL---LKKAGEEVP 402
           +++A     KA +I P  A  + + G +     +   AL     A +L   L KA     
Sbjct: 246 LDEALNDYNKAVRISPILADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKA----- 300

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                N G IH   GE   A   F  AL
Sbjct: 301 ---YTNRGWIHKSIGECPKALPDFDRAL 325



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 5/137 (3%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           +++A  +D    + +V + + LL+  + ++A S        D  N   L     ++   G
Sbjct: 321 FDRALELDPSAAAIYVFRAECLLSMHQTDRARSDLDKAYALDPTNPEILETLGSLKEIAG 380

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            YS +LE + + + + P+   A  + +G+   K G L +A + F RA+QLDP+N EA + 
Sbjct: 381 DYSAALEMFTKLVDLRPNDSAA-HVDLGMALGKSGSLARAVEEFTRAIQLDPQNREAYLR 439

Query: 192 LAVMDLQANEAAGIRKG 208
             V    A +  G +KG
Sbjct: 440 RGV----ARDLLGDKKG 452


>gi|209527528|ref|ZP_03276030.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209492016|gb|EDZ92369.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 530

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 149/341 (43%), Gaps = 47/341 (13%)

Query: 72  YNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADR------DNVPALLGQ 123
           YN+A  I     S W     G+ L  +G++++A +A++   E +       DN+  LL Q
Sbjct: 25  YNQA--IAASPKSAWYYHNLGEALSQQGKIDEAIAAYRQATELNPNSAWSYDNLGTLLNQ 82

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
                 +G   +++  +++A+++ P         + L   K G   +A    Q+A++L  
Sbjct: 83  ------QGNLPEAVRCFRQAIELDPYF-WQFYHNLALVLIKQGHPEEAVSLLQKAIELTA 135

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY---CAMALNYLANHFFFTGQHF 240
           ++ E   +L     Q  + +   + +   ++  E+ PY   C M+L          GQ  
Sbjct: 136 DDAELYHSLGKAYHQQQQYS---EAVTAYRQGLELNPYWSDCYMSL----------GQ-- 180

Query: 241 LVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEK-AGLYYMASVKEINKP 293
            +E L ET  A+ ++       P  S +   L     S+G +E+ A LY    + + N  
Sbjct: 181 TLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSA 240

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
               +    LG      G    A  +++K LE+ P+  E L+ LG +  QL Q E A ++
Sbjct: 241 TSHKY----LGTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAVDI 296

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 393
            RKA ++DP  A  +  LG+ L   D    AL A++ A  L
Sbjct: 297 FRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASEL 337



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 159/361 (44%), Gaps = 20/361 (5%)

Query: 16  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 75
           Q+L +G   ++DE  A    + IA       YY  LG+  ++Q + +E    A   Y +A
Sbjct: 11  QLLRKG---QLDEAIASYN-QAIAASPKSAWYYHNLGEALSQQGKIDE----AIAAYRQA 62

Query: 76  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 135
           + ++ +   ++   G LL  +G + +A   F+  +E D          A V   +G   +
Sbjct: 63  TELNPNSAWSYDNLGTLLNQQGNLPEAVRCFRQAIELDPYFWQFYHNLALVLIKQGHPEE 122

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
           ++   ++A+++  +    +   +G   ++  Q  +A  A+++ L+L+P   +  ++L   
Sbjct: 123 AVSLLQKAIEL-TADDAELYHSLGKAYHQQQQYSEAVTAYRQGLELNPYWSDCYMSLG-- 179

Query: 196 DLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
             Q  EA G   + +   +RA+E+ P  + AL  L       G+   +  L      V  
Sbjct: 180 --QTLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDP 237

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
           +  T SH Y  L  +  + G   +A   Y  +++      E + P   LGQV  +L  + 
Sbjct: 238 NSAT-SHKY--LGTALANSGKLSEAAESYQKALELDPNLVEILQP---LGQVLTQLNQWE 291

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           +A+  F K  ++ P++      LG    +  ++ +A    +KA+++ P       DLG++
Sbjct: 292 AAVDIFRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASELHPTSTPVLFDLGQV 351

Query: 375 L 375
           L
Sbjct: 352 L 352



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 147/363 (40%), Gaps = 47/363 (12%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LGK   +Q++  E    A   Y +   ++ +    ++  GQ L A GE E+A ++++
Sbjct: 141 YHSLGKAYHQQQQYSE----AVTAYRQGLELNPYWSDCYMSLGQTLEALGETEEAIASYR 196

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLG 166
              E + +   AL     V  ++GR+ +    Y+R   V P+   + + LG  L     G
Sbjct: 197 RAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSHKYLGTALANS--G 254

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
           +L +A +++Q+AL+LDP  VE L  L  +  Q N+       ++  ++A ++ P  A   
Sbjct: 255 KLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQ---WEAAVDIFRKATQVDPNSASFY 311

Query: 227 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA----RSYH---SKGDYEKA 279
           + L      T    L E L     A   H PT +   ++L     + YH   +   Y+KA
Sbjct: 312 HQLGQ--ALTKCDRLSEALAAYQKASELH-PTSTPVLFDLGQVLTKLYHWSEAIATYQKA 368

Query: 280 GLYYMASVKEI---------------------NKPHEFIFP-----YYGLGQVQLKLGDF 313
                 +  EI                     ++ HEF  P     Y    Q     G  
Sbjct: 369 LYLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSESHEF-HPNSSESYEKFAQFLRSKGKI 427

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
             A+  F +   + P +      LG+   +  + ++A    +KA +++P        LG+
Sbjct: 428 EDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAIIAYQKAGELNPYSPHVQYHLGQ 487

Query: 374 LLI 376
            L+
Sbjct: 488 ALV 490


>gi|326430069|gb|EGD75639.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818]
          Length = 598

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 159/380 (41%), Gaps = 64/380 (16%)

Query: 116 NVPALLGQACVEF-NRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLG 166
           NV AL     + + ++G Y  ++ FY++AL +        HPS        +GL  Y  G
Sbjct: 164 NVAALYNNLGIAYSDKGEYDKAIVFYEKALAIKVETLGEKHPSTANTYG-NLGLAYYSKG 222

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR--------KGMEKMQRAFEI 218
           +  KA   +++AL +    VE L        Q     GI         K +   ++A  I
Sbjct: 223 EYDKAIAFYEKALAI---RVETLGEKHPSTAQTYNNLGIAYHSKGDYDKAIAYHEKALAI 279

Query: 219 --------YPYCAMALNYLANHFFFTGQH-----FLVEQLTETALAVTNHGPTKSHSYYN 265
                   +P  A+  N L   F   G +     F  + L  T  A+    P+ + +Y N
Sbjct: 280 KVETLGAKHPSTAITYNNLGIAFKNKGDYDRAIAFYEKDLAITVEALGEKHPSTAQTYNN 339

Query: 266 LARSYHSKGDYEKAGLYY----MASVKEINKPHEFIFPYYG-LGQVQLKLGDFRSALTNF 320
           L  ++ +KGDY++A  +Y      +V+ + + H      Y  LG      G++  A+  +
Sbjct: 340 LGIAFKNKGDYDRAIAFYEKDLAITVETLGEKHPSTASTYNNLGSAYYSKGEYDRAIALY 399

Query: 321 EKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRD 364
           EK L I        +P   +T   LG  Y   G+ +KA E+  +A  I         P  
Sbjct: 400 EKALAITAEALGEKHPSTAQTYNNLGAAYADKGEYDKAVEVYEQALAIKVEALGEKHPST 459

Query: 365 AQAFIDLGELLISSDTG---AALDAFKTARTL-LKKAGEE--VPIEVLNNIGVIHFEKGE 418
           AQ + +LG     +D G    A++ ++ A  + ++  GE+       L NIG++H  +G+
Sbjct: 460 AQTYNNLGAAY--ADKGEYDKAVEVYEQALAVKVETLGEKHSSVAMTLENIGLLHDTRGD 517

Query: 419 FESAHQSFKDALGDGIWLTL 438
            E A    + AL DG   T+
Sbjct: 518 KEQACAYMQRAL-DGYTSTV 536



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 87/216 (40%), Gaps = 30/216 (13%)

Query: 237 GQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASV 287
           G+H       ETALAV        G   +  Y NL  +Y  KG+Y+KA ++Y       V
Sbjct: 138 GEHDRAIAYYETALAVYLRTEGEKGRNVAALYNNLGIAYSDKGEYDKAIVFYEKALAIKV 197

Query: 288 KEINKPHEFIFPYYG-LGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALG 338
           + + + H      YG LG      G++  A+  +EK L I        +P   +T   LG
Sbjct: 198 ETLGEKHPSTANTYGNLGLAYYSKGEYDKAIAFYEKALAIRVETLGEKHPSTAQTYNNLG 257

Query: 339 HIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAF--K 388
             Y   G  +KA     KA  I         P  A  + +LG    +        AF  K
Sbjct: 258 IAYHSKGDYDKAIAYHEKALAIKVETLGAKHPSTAITYNNLGIAFKNKGDYDRAIAFYEK 317

Query: 389 TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESA 422
                ++  GE+ P   +  NN+G+    KG+++ A
Sbjct: 318 DLAITVEALGEKHPSTAQTYNNLGIAFKNKGDYDRA 353


>gi|443325971|ref|ZP_21054641.1| mannosyltransferase OCH1-like enzyme [Xenococcus sp. PCC 7305]
 gi|442794408|gb|ELS03825.1| mannosyltransferase OCH1-like enzyme [Xenococcus sp. PCC 7305]
          Length = 1103

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 109/493 (22%), Positives = 210/493 (42%), Gaps = 50/493 (10%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAI 154
           G +++A   F   LE + ++   L+    ++  + RY+ +LE++++A+ + P+   P   
Sbjct: 156 GALKRAEQHFIQALEYNANHFHTLIHMGILQRKKQRYNLALEYFQKAITIEPTKIEPYLS 215

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG-MEKMQ 213
           RL I LC  K  Q  KA+    + L+  P ++ AL+   V   Q     G RK  +   Q
Sbjct: 216 RLDI-LCHRK--QFKKAKNQINQLLENFPNSISALLKAGVTYRQL----GDRKAALNTFQ 268

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
            A ++ P        L+   F+ GQ   +E+  +    +    P +  +   L   Y  +
Sbjct: 269 EAIKLAPNNQNIKLELSAEQFYQGQ---IEECRKNIQEILEINPKQGGAIIRLGELYRKE 325

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
            +  KA   +  ++ ++N P  F+  +    +++ +LGDF +A  +F K LE   ++   
Sbjct: 326 NNRPKALASFQKAL-DLN-PQSFLANFNVAVELR-ELGDFEAAEQHFIKALEYNKNHFYA 382

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 393
           L  +G +  +  +   A E  +KA  I+P   +    L ++ +S D G   +A    + L
Sbjct: 383 LIHMGILQRKKQKYNLALEYFQKAITIEPTKIEP--HLAKIDVSCDVGRFHEAENRLKVL 440

Query: 394 LKKAGEEVPIEVLNNIGVIHFEK--GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDAS 451
            +K  EE  I + +     HF +  G+ E A +          W  L   + K+      
Sbjct: 441 QQKYPEEYIISIFSG----HFARKLGQEEKALE----------WFCLAQKQAKSKDQKLE 486

Query: 452 ASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL----------ARLLEQIHDTVAASV 501
           A +L+ + +      EN  N VE      T+L               +LE+  + + A+ 
Sbjct: 487 AKILKIETLTNLKSLENVANPVE------TILVEFPDDLRSQMLQGLILEKKLNLIEAAK 540

Query: 502 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN 561
           +Y+ +L    +++   ++LA +      +  SI L+ E  ++ G   N    LG +    
Sbjct: 541 VYQNVLATNPNHLQVSIKLARVYSQSAQIPASINLLEETYQILGANLNVFIELGSIYQAL 600

Query: 562 DDWVKAKETFRAA 574
           ++W  A + +  A
Sbjct: 601 ENWDLASQWYEKA 613



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 159/375 (42%), Gaps = 70/375 (18%)

Query: 84  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           S W+  G +    G+ + A + F+  ++ +  N    L  A  + + G+  +  +  +  
Sbjct: 41  SGWIALGLIYRQSGDHQLALNTFQKAIKIEPRNTKVKLELAAEQLHYGQIKECSQNIQEV 100

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLG-------KARQAFQRALQLDPENVEALVALAVMD 196
           L ++P+   A          K G+L        KA  +FQ+AL L+P++  A   +AV  
Sbjct: 101 LAINPNHEIAF--------VKQGELNRSQNKRRKALASFQKALDLNPQSFLANFNVAV-- 150

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV--------EQLTET 248
            +  E   +++  +   +A E          Y ANHF     H L+        +Q    
Sbjct: 151 -ELRELGALKRAEQHFIQALE----------YNANHF-----HTLIHMGILQRKKQRYNL 194

Query: 249 AL-----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP---- 299
           AL     A+T   PTK   Y +       +  ++KA         +IN+  E  FP    
Sbjct: 195 ALEYFQKAITIE-PTKIEPYLSRLDILCHRKQFKKAK-------NQINQLLEN-FPNSIS 245

Query: 300 -YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
                G    +LGD ++AL  F++ +++ P+N      L       GQIE+ ++ +++  
Sbjct: 246 ALLKAGVTYRQLGDRKAALNTFQEAIKLAPNNQNIKLELSAEQFYQGQIEECRKNIQEIL 305

Query: 359 KIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFE 415
           +I+P+   A I LGEL    ++   AL +F       +KA +  P   L   N+ V   E
Sbjct: 306 EINPKQGGAIIRLGELYRKENNRPKALASF-------QKALDLNPQSFLANFNVAVELRE 358

Query: 416 KGEFESAHQSFKDAL 430
            G+FE+A Q F  AL
Sbjct: 359 LGDFEAAEQHFIKAL 373



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 174/414 (42%), Gaps = 81/414 (19%)

Query: 286 SVKEINK-----PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           S+ EINK     P+ F+  +  LG +  + GD + AL  F+K ++I P N +    L   
Sbjct: 25  SITEINKLLLDFPN-FVSGWIALGLIYRQSGDHQLALNTFQKAIKIEPRNTKVKLELAAE 83

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTL------ 393
            +  GQI++  + +++   I+P    AF+  GEL  S +    AL +F+ A  L      
Sbjct: 84  QLHYGQIKECSQNIQEVLAINPNHEIAFVKQGELNRSQNKRRKALASFQKALDLNPQSFL 143

Query: 394 --------------LKKAGEEVP---------IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                         LK+A +               L ++G++  +K  +  A + F+ A 
Sbjct: 144 ANFNVAVELRELGALKRAEQHFIQALEYNANHFHTLIHMGILQRKKQRYNLALEYFQKA- 202

Query: 431 GDGIWLTLLDSKTKTYV--IDASASMLQFKDM--QLFHRFENDGNHVELPWNKVTVLFNL 486
                +T+  +K + Y+  +D      QFK    Q+    EN       P N ++ L   
Sbjct: 203 -----ITIEPTKIEPYLSRLDILCHRKQFKKAKNQINQLLEN------FP-NSISALLKA 250

Query: 487 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA-------IAKARNNLQLSIELVNE 539
                Q+ D  AA   ++  +    +  +  L L+A       I + R N+Q       E
Sbjct: 251 GVTYRQLGDRKAALNTFQEAIKLAPNNQNIKLELSAEQFYQGQIEECRKNIQ-------E 303

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 599
            L++N K   A+  LG+L  K ++  KA  +F+ A D      S+    L N+N    LR
Sbjct: 304 ILEINPKQGGAIIRLGELYRKENNRPKALASFQKALDLNP--QSF----LANFNVAVELR 357

Query: 600 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
                   E    E A++ + + +  + ++ YA    G++  +K +++++ + F
Sbjct: 358 --------ELGDFEAAEQHFIKALEYNKNHFYALIHMGILQRKKQKYNLALEYF 403


>gi|301122157|ref|XP_002908805.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099567|gb|EEY57619.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 632

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 157/378 (41%), Gaps = 30/378 (7%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K  ++ LA   ++KASRI   +   W   G + L    +++A   FK++L  D  N  A 
Sbjct: 127 KAGNYGLARMIFSKASRISF-DAEVWTSWGSMELETKNLQEAKRIFKVILATDPQNPMAG 185

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG A  E   G   ++ E ++  L+ HP     I    G+   K   +G AR  FQ A+ 
Sbjct: 186 LGMALWEVQAGHPDEARERFQELLEEHPKDI-LIMQAYGVFEAKCQHVGLARSIFQNAVS 244

Query: 181 LDPENVEALVALAVMDLQANEAAGIRK-GMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
                 +   A A    +A   AG+ K  +  +  AFE +P     +   A   F  G  
Sbjct: 245 HPRATGQVWHAWA----KAEYDAGLYKNALAVISTAFERFPTHKWLVLLGAMAHFKLGDV 300

Query: 240 F----LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPH 294
           +       +L +  L V    P+  +SY   A+     G+ + A GLY    V+ + +  
Sbjct: 301 YEARRAYRRLIDGGLYVE---PSAFNSY---AKMEEELGNEDAAVGLY----VEALEQHP 350

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           + +     L  +  + G  R+A   FEK LE        L A G    Q G+++ A+EL 
Sbjct: 351 DHVPSMMSLAILYKRRGRMRNARKIFEKALENLQHTGPILHAFGDFEEQHGELDNARELY 410

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVI 412
            +A  + P   +++  L  +       A L  ++ AR+ L  A + VP    +L  +  I
Sbjct: 411 DEATNVQPTTVESWRALARV------EARLKNYEAARSALTMASQHVPNDAPLLVELAKI 464

Query: 413 HFEKGEFESAHQSFKDAL 430
                 F +A  + + AL
Sbjct: 465 EQRNRRFPAARTALEKAL 482


>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 3418

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 154/351 (43%), Gaps = 63/351 (17%)

Query: 40   ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 99
            +LN LG+ Y   GK E            A Q +++  ++D +    +   G    AKG+ 
Sbjct: 3029 MLNNLGIIYRQKGKYEK-----------AIQLFSQCIKLDQYFCDYFTNLGLCYYAKGDY 3077

Query: 100  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            + A + F+     DR NV  LL  A     +G    ++++ ++ ++++P+   A    +G
Sbjct: 3078 DGAINYFQKGYTLDRINVECLLNLASALKAKGEPQQAIKYLQKIIKINPNYTAA-YYNLG 3136

Query: 160  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
            + + + G +  A+ +F+ +++ DP ++ +++ LA++  + N+    +K +   ++A EI 
Sbjct: 3137 IIQKQNGNISDAQTSFKLSIEKDPYHINSVIQLAIIYREQNDYDNSKKLL---KQALEI- 3192

Query: 220  PYCAMALNYLANHFFFTGQHFLVEQLTETA------LAVTNHGPTKSHSYYNLARSYHSK 273
                 + N LAN         L  Q  + A      L   ++ P  +   +N+      +
Sbjct: 3193 ----DSNNELANF----NIALLYRQKCKHAKELNALLKALSYSPKNAKYLHNIGICQRLQ 3244

Query: 274  GDYEKAGLYYMASVK------------------------EIN--------KPHEFIFPYY 301
             +Y++A +Y+  SV+                        EIN         P+ F   +Y
Sbjct: 3245 ENYQEALIYFKQSVQIDSENAKYYYNLADIYNCLKMPIEEINCYMKCIQLNPN-FERAHY 3303

Query: 302  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
             LG     + +++ A++ FEK +EI P N +   +LG+IY      EK+ E
Sbjct: 3304 NLGIAYENIKNYKEAISCFEKCIEIAPSNDQYFFSLGNIYSLQRNFEKSNE 3354



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/342 (21%), Positives = 153/342 (44%), Gaps = 32/342 (9%)

Query: 42   NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 101
            N  G     L K+ T+ ++ EE    A ++  ++ RI  + P   +   Q L++  + ++
Sbjct: 1566 NCSGFCLYQLSKLSTQHKKIEE----AVEHLKQSVRISPNYPPFRLAFAQNLISLLKYDK 1621

Query: 102  ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
            AS   + +L+ D +N  A       ++ + ++  ++++        P+    I+L IG C
Sbjct: 1622 ASEELEKILQQDSENYDANHFMGICQYQKNQFKSAIQYLSVCEAQKPNTYEIIKL-IGQC 1680

Query: 162  RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
              ++ Q  KA Q F+  +  +P++ E L+ LA       +   +++ +E  Q+AF+    
Sbjct: 1681 HKQMNQTEKAIQFFELCIDQNPKDAEVLILLAE---SLYKQGDVKQTLEMYQKAFK---- 1733

Query: 222  CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN-----LARSYHSKGDY 276
                 N   + +F+     L E        +      K +S  +     L   Y + GD 
Sbjct: 1734 ----YNTKDSQYFYQYAKILFETKDFNQAIIFAQECIKINSSLDNAQNLLGLCYMNIGDM 1789

Query: 277  EKAGLYYMASVK---EINKPH-EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
             KA    +A+ K   +IN+ H +++     LG+  +K G    A++   K + +YPD  E
Sbjct: 1790 NKA----IAAFKKQGQINRLHKDYLL---NLGKAYIKKGQTVDAISTLSKFMNLYPDIEE 1842

Query: 333  TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            T + L +++    Q +K  ++L+   +  P+  +  +++ ++
Sbjct: 1843 TYELLNYLFDLQQQPKKQIKILQNLLEKYPKKTKLNLNIADI 1884



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 76/377 (20%), Positives = 169/377 (44%), Gaps = 26/377 (6%)

Query: 60   EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
            E+++ ++ A  +Y K ++I+            + ++     QA      ++E    +   
Sbjct: 2902 EQDQQYLEALIHYQKQTQINPENTEILFKMALIQISYDNFNQAKQLIDKLIELKPQDYLV 2961

Query: 120  LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
               QA +   +G   ++++ + ++L + P+    +   + LC  +LG + + ++ ++   
Sbjct: 2962 YSAQAYLYKRQGNLQEAIKSFDQSLSIQPTNTFTL-FNLALCHGELGNIKQEKKMYKEIQ 3020

Query: 180  QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            ++ P + + L  L ++  Q        KG  K ++A +++  C     Y  ++F   G  
Sbjct: 3021 KISPNDRKMLNNLGIIYRQ--------KG--KYEKAIQLFSQCIKLDQYFCDYFTNLGLC 3070

Query: 240  FLVEQLTETALAVTNHGPT----KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
            +  +   + A+     G T          NLA +  +KG+ ++A + Y+  + +IN P+ 
Sbjct: 3071 YYAKGDYDGAINYFQKGYTLDRINVECLLNLASALKAKGEPQQA-IKYLQKIIKIN-PN- 3127

Query: 296  FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
            +   YY LG +Q + G+   A T+F+  +E  P +  ++  L  IY +    + +++LL+
Sbjct: 3128 YTAAYYNLGIIQKQNGNISDAQTSFKLSIEKDPYHINSVIQLAIIYREQNDYDNSKKLLK 3187

Query: 356  KAAKIDPRDAQAFIDLGELLISSDTGAA--LDAFKTARTLLKKAGEEVPIEVLNNIGVIH 413
            +A +ID  +  A  ++  LL       A  L+A   A +   K       + L+NIG+  
Sbjct: 3188 QALEIDSNNELANFNIA-LLYRQKCKHAKELNALLKALSYSPKNA-----KYLHNIGICQ 3241

Query: 414  FEKGEFESAHQSFKDAL 430
              +  ++ A   FK ++
Sbjct: 3242 RLQENYQEALIYFKQSV 3258



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 150/347 (43%), Gaps = 58/347 (16%)

Query: 81   HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN--VPALLGQACVEFNRGRYSDSLE 138
            ++P       ++L  +G +  +   ++  L ++ ++  V  LLG+A +E   G    ++ 
Sbjct: 2821 NDPEVIKLHAKVLQQQGNLSSSIIQYQKYLSSNPNSYEVQYLLGKARLEI--GCPDQAIY 2878

Query: 139  FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 198
              K+ LQ++P  P  I   +G    +  Q  +A   +Q+  Q++PEN E L  +A++ + 
Sbjct: 2879 SLKKCLQLNPKFPN-INGILGEAYEQDQQYLEALIHYQKQTQINPENTEILFKMALIQIS 2937

Query: 199  ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT--ETALAVTNHG 256
             +     ++ ++K+    E+ P     L Y A  + +  Q  L E +   + +L++    
Sbjct: 2938 YDNFNQAKQLIDKL---IELKP--QDYLVYSAQAYLYKRQGNLQEAIKSFDQSLSIQ--- 2989

Query: 257  PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
            PT + + +NLA  +   G+                                  LG+ +  
Sbjct: 2990 PTNTFTLFNLALCH---GE----------------------------------LGNIKQE 3012

Query: 317  LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
               ++++ +I P++ + L  LG IY Q G+ EKA +L  +  K+D      F +LG    
Sbjct: 3013 KKMYKEIQKISPNDRKMLNNLGIIYRQKGKYEKAIQLFSQCIKLDQYFCDYFTNLGLCYY 3072

Query: 377  S-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
            +  D   A++ F+   TL     + + +E L N+      KGE + A
Sbjct: 3073 AKGDYDGAINYFQKGYTL-----DRINVECLLNLASALKAKGEPQQA 3114



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 146/332 (43%), Gaps = 37/332 (11%)

Query: 67   LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
            L+  YYN++ ++D     ++   G LL  +   E +  +    ++ D+ ++ A   +  +
Sbjct: 1171 LSIGYYNRSLKLDQKNAESYYRTGILLFKQNMFENSIKSLNNCIKIDKYHLGA--HEQLI 1228

Query: 127  EFNRGRYSDSLEFY-KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
            +    + +  LE Y K+ L+       A +  I   + K     K  Q  Q   +++P N
Sbjct: 1229 QIYEVQQNKELEIYHKKTLKE----SKAFKKYIYYMQNK--DYEKCIQLLQEWEEINPTN 1282

Query: 186  VEALVALA----VMDLQANEAAGIRKGME-------KMQRAFEIYPYCAMALNYLANHFF 234
             E    L+    ++  + ++   +++ +         +QR +E+   C      LA   F
Sbjct: 1283 DECQYYLSDLMRIIGKKDSQVHYLKQCLTLNPTHELALQRKYELQNSCQNE--QLAQTIF 1340

Query: 235  F--TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH--SKGDYEKAGLYYMASVKEI 290
            +    QH   E + +      N    +S+SY +     +  SK D  KA LY+     + 
Sbjct: 1341 YEELDQHNNWEYVEQEENEFQNLLSIRSNSYISFKSGLYMKSKQDLSKAFLYFEEYSNQ- 1399

Query: 291  NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP-DNCETLKALGHIYVQLGQIEK 349
             +P++++  +Y LG ++ K  +F  A   + K L++ P DN  +   LG +Y+ + ++E+
Sbjct: 1400 -QPNDYL-GFYLLGHIEEKNCNFEVAANFYLKSLQLKPEDNFNSNNRLGIVYLNMKKVEE 1457

Query: 350  AQELLRKAAKIDPRD-------AQAFIDLGEL 374
            A + L +A KI  ++       AQ +  LG+ 
Sbjct: 1458 ALKYLNEAKKIIHKEEINICAIAQCYSSLGQF 1489



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 47/204 (23%)

Query: 51   LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
            LG ++ KQ++ +E    A   +NKA +++ ++P  +   G+L   + E  +A + F+  L
Sbjct: 2294 LGVLKKKQKKYDE----ARSSFNKAIQLNSNDPLYYEAFGKLEYGQKEYLKACNHFEKYL 2349

Query: 111  EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG------------- 157
            +   +  P +     +  N   Y + ++ YK A+ +   C  ++ +              
Sbjct: 2350 QKVAN--PEI---EIINLNAQSYYN-IKMYKEAINL---CDKSVEICLQDDNQKKQILSK 2400

Query: 158  ----IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 213
                IGLC Y+  +  KA + F ++   DP+N E+   L            I K + + Q
Sbjct: 2401 SYHLIGLCYYQQSEYKKAEEFFLKSTNADPQNSESFFWL----------GNILKLLNEQQ 2450

Query: 214  RAFEIYPYC-------AMALNYLA 230
             A + Y  C       A+ LNYL 
Sbjct: 2451 EAKKAYLTCLSLNKEHALCLNYLG 2474


>gi|423065536|ref|ZP_17054326.1| TPR containing protein [Arthrospira platensis C1]
 gi|406712979|gb|EKD08154.1| TPR containing protein [Arthrospira platensis C1]
          Length = 530

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 149/341 (43%), Gaps = 47/341 (13%)

Query: 72  YNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADR------DNVPALLGQ 123
           YN+A  I     S W     G+ L  +G++++A +A++   E +       DN+  LL Q
Sbjct: 25  YNQA--IAASPKSAWYYHNLGEALSQQGKIDEAIAAYRQATELNPNSAWSYDNLGTLLNQ 82

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
                 +G   +++  +++A+++ P         + L   K G   +A    Q+A++L  
Sbjct: 83  ------QGNLPEAVRCFRQAIELDPYF-WQFYHNLALVLIKQGHPEEAVSLLQKAIELTA 135

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY---CAMALNYLANHFFFTGQHF 240
           ++ E   +L     Q  + +   + +   ++  E+ PY   C M+L          GQ  
Sbjct: 136 DDAELYHSLGKAYHQQQQYS---EAVTAYRQGLELNPYWSDCYMSL----------GQ-- 180

Query: 241 LVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEK-AGLYYMASVKEINKP 293
            +E L ET  A+ ++       P  S +   L     S+G +E+ A LY    + + N  
Sbjct: 181 TLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSA 240

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
               +    LG      G    A  +++K LE+ P+  E L+ LG +  QL Q E A ++
Sbjct: 241 TSHKY----LGTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAVDI 296

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 393
            RKA ++DP  A  +  LG+ L   D    AL A++ A  L
Sbjct: 297 FRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASEL 337



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 159/361 (44%), Gaps = 20/361 (5%)

Query: 16  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 75
           Q+L +G   ++DE  A    + IA       YY  LG+  ++Q + +E    A   Y +A
Sbjct: 11  QLLRKG---QLDEAIASYN-QAIAASPKSAWYYHNLGEALSQQGKIDE----AIAAYRQA 62

Query: 76  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 135
           + ++ +   ++   G LL  +G + +A   F+  +E D          A V   +G   +
Sbjct: 63  TELNPNSAWSYDNLGTLLNQQGNLPEAVRCFRQAIELDPYFWQFYHNLALVLIKQGHPEE 122

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
           ++   ++A+++  +    +   +G   ++  Q  +A  A+++ L+L+P   +  ++L   
Sbjct: 123 AVSLLQKAIEL-TADDAELYHSLGKAYHQQQQYSEAVTAYRQGLELNPYWSDCYMSLG-- 179

Query: 196 DLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
             Q  EA G   + +   +RA+E+ P  + AL  L       G+   +  L      V  
Sbjct: 180 --QTLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDP 237

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
           +  T SH Y  L  +  + G   +A   Y  +++      E + P   LGQV  +L  + 
Sbjct: 238 NSAT-SHKY--LGTALANSGKLSEAAESYQKALELDPNLVEILQP---LGQVLTQLNQWE 291

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           +A+  F K  ++ P++      LG    +  ++ +A    +KA+++ P       DLG++
Sbjct: 292 AAVDIFRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASELHPTSTPVLFDLGQV 351

Query: 375 L 375
           L
Sbjct: 352 L 352



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 148/363 (40%), Gaps = 47/363 (12%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LGK   +Q++  E    A   Y +   ++ +    ++  GQ L A GE E+A ++++
Sbjct: 141 YHSLGKAYHQQQQYSE----AVTAYRQGLELNPYWSDCYMSLGQTLEALGETEEAIASYR 196

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLG 166
              E + +   AL     V  ++GR+ +    Y+R   V P+   + + LG  L     G
Sbjct: 197 RAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSHKYLGTALANS--G 254

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
           +L +A +++Q+AL+LDP  VE L  L  +  Q N+       ++  ++A ++ P  A   
Sbjct: 255 KLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQ---WEAAVDIFRKATQVDPNSASFY 311

Query: 227 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA----RSYH---SKGDYEKA 279
           + L      T    L E L     A   H PT +   ++L     + YH   +   Y+KA
Sbjct: 312 HQLGQ--ALTKCDRLSEALAAYQKASELH-PTSTPVLFDLGQVLTKLYHWSEAIATYQKA 368

Query: 280 GLYYMASVKEI---------------------NKPHEFIFP-----YYGLGQVQLKLGDF 313
                 +  EI                     ++ HEF  P     Y   GQ     G  
Sbjct: 369 LYLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSESHEF-HPNSGESYETFGQFLRSKGKI 427

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
             A+  F +   + P +      LG+   +  + ++A    +KA +++P        LG+
Sbjct: 428 EDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAIIAYQKAGELNPYSPHVQYHLGQ 487

Query: 374 LLI 376
            L+
Sbjct: 488 ALV 490


>gi|72383071|ref|YP_292426.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002921|gb|AAZ58723.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 909

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 161/366 (43%), Gaps = 20/366 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  Y  KA +I+ +    +   G +L   G+ + A  +++  ++ + +   A      + 
Sbjct: 121 AELYTRKAIKINPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQINPNYADAHYNLGIIL 180

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G   D+   Y++A+Q++P+   A    +G     L  L  A  ++++A+Q++P   +
Sbjct: 181 KELGNLQDAELSYRKAIQINPNYADAYS-NLGNVLKDLDNLQDAELSYRKAIQINPSYAD 239

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A   L  +     +   ++      ++A +I P      +Y   HF        + +L +
Sbjct: 240 AYSNLGNV---LKDLGNLQDAELSYRKAIQINP------DYAEAHFNLGNLLKDLGKLQD 290

Query: 248 TALAVTNHGPTKS---HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
             L+       KS    ++YNL       G+ + A  Y   + K I    ++   ++ LG
Sbjct: 291 AELSYRKAIQIKSDYAEAHYNLGIILKDLGNLQDAEFY---NRKAIQIKPDYAEAHFNLG 347

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
            +   LG+ + A  ++ + ++I PD  +    LG++   LG+++ A+   RKA +I P  
Sbjct: 348 IILKDLGNLQDAEFSYRQAIQIKPDYADAYSNLGNVLKDLGKLKDAELSYRKAIQIKPDY 407

Query: 365 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 424
           A+ + +LG +L   D G   DA  + R  ++   +    +  +N+G I  E   F  A  
Sbjct: 408 AEVYSNLGNVL--KDLGNLQDAEFSYRKAIQIKPDYA--DAYSNLGNILKELSNFTDAIN 463

Query: 425 SFKDAL 430
            FKDAL
Sbjct: 464 QFKDAL 469



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 100/470 (21%), Positives = 195/470 (41%), Gaps = 57/470 (12%)

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
           ++G +++A+  ++  +     +         +  + G   D+  + ++A++++P+   A 
Sbjct: 80  SQGNIKEAAKNYQYFINQGFSDHMVFSNYGAILRDLGNLQDAELYTRKAIKINPNYALAY 139

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
              +G     LG+   A  ++++A+Q++P   +A   L ++     E   ++      ++
Sbjct: 140 S-NLGNVLKDLGKSQDAELSYRKAIQINPNYADAHYNLGII---LKELGNLQDAELSYRK 195

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           A +I P  A A + L N           E     A+ +    P+ + +Y NL       G
Sbjct: 196 AIQINPNYADAYSNLGNVLKDLDNLQDAELSYRKAIQIN---PSYADAYSNLGNVLKDLG 252

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           + + A L Y  ++ +IN   ++   ++ LG +   LG  + A  ++ K ++I  D  E  
Sbjct: 253 NLQDAELSYRKAI-QINP--DYAEAHFNLGNLLKDLGKLQDAELSYRKAIQIKSDYAEAH 309

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             LG I   LG ++ A+   RKA +I P  A+A  +LG  +I  D G   DA  + R   
Sbjct: 310 YNLGIILKDLGNLQDAEFYNRKAIQIKPDYAEAHFNLG--IILKDLGNLQDAEFSYRQ-- 365

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
                   I++          K ++  A+ +  + L D                     +
Sbjct: 366 -------AIQI----------KPDYADAYSNLGNVLKD---------------------L 387

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
            + KD +L +R       +++  +   V  NL  +L+ + +   A   YR  +    DY 
Sbjct: 388 GKLKDAELSYR-----KAIQIKPDYAEVYSNLGNVLKDLGNLQDAEFSYRKAIQIKPDYA 442

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
           DAY  L  I K  +N   +I    +ALK+N +  +A + L   +    DW
Sbjct: 443 DAYSNLGNILKELSNFTDAINQFKDALKLNNELTSAQTGLMSTQGNICDW 492



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 152/342 (44%), Gaps = 25/342 (7%)

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
           N G +    + N        G+ + A LY   ++K IN    +   Y  LG V   LG  
Sbjct: 96  NQGFSDHMVFSNYGAILRDLGNLQDAELYTRKAIK-INP--NYALAYSNLGNVLKDLGKS 152

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
           + A  ++ K ++I P+  +    LG I  +LG ++ A+   RKA +I+P  A A+ +LG 
Sbjct: 153 QDAELSYRKAIQINPNYADAHYNLGIILKELGNLQDAELSYRKAIQINPNYADAYSNLGN 212

Query: 374 LLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALG 431
           +L        LD  + A    +KA +  P   +  +N+G +  + G  + A  S++ A  
Sbjct: 213 VL------KDLDNLQDAELSYRKAIQINPSYADAYSNLGNVLKDLGNLQDAELSYRKA-- 264

Query: 432 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 491
             I +    ++    + +    + + +D +L +R       +++  +     +NL  +L+
Sbjct: 265 --IQINPDYAEAHFNLGNLLKDLGKLQDAELSYR-----KAIQIKSDYAEAHYNLGIILK 317

Query: 492 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 551
            + +   A    R  +    DY +A+  L  I K   NLQ +     +A+++   Y +A 
Sbjct: 318 DLGNLQDAEFYNRKAIQIKPDYAEAHFNLGIILKDLGNLQDAEFSYRQAIQIKPDYADAY 377

Query: 552 SMLGDLELKNDDWVKAKETFRAASDATDGKDSYATL--SLGN 591
           S LG++ LK  D  K K+   +   A   K  YA +  +LGN
Sbjct: 378 SNLGNV-LK--DLGKLKDAELSYRKAIQIKPDYAEVYSNLGN 416


>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 403

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 134/308 (43%), Gaps = 44/308 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y +A +ID  +  TW  KG LL   G+ E+A   ++  LE ++ N  A   +    
Sbjct: 103 ALECYERALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWYNKGNGL 162

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + G+Y ++LE Y++ALQ++     A      L   +L +  +A + + RALQ+DP++  
Sbjct: 163 RSLGKYEEALECYEKALQINAEFVEAW-YNKALIFEELKRYDEALECYGRALQIDPQD-- 219

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                   D   N    +   + K ++A E Y   A+ +N                   +
Sbjct: 220 --------DGTWNNKGALLDTIGKPEKAIECYEK-ALEIN------------------QK 252

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            A A  N G         L R   +   YEKA         EIN  ++  +   G+  + 
Sbjct: 253 NAKAWNNKGVVLEE----LKRYDEALECYEKA--------LEINLENDETWANKGV--LL 298

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            KLG +  AL  FEK LEI P+  +  +  G I   L + E+A +   KA K++P+D   
Sbjct: 299 RKLGKYEEALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNPQDKTL 358

Query: 368 FIDLGELL 375
           +   G+ L
Sbjct: 359 WYMQGKTL 366



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 1/116 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y KA  I++    TW  KG LL   G+ E+A   F+  LE + +   A   +  + 
Sbjct: 273 ALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWEWKGIIL 332

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
            +  +  ++L+ Y++AL+++P     +    G    KLG+  KA++++++AL++DP
Sbjct: 333 EDLKKPEEALKCYEKALKLNPQ-DKTLWYMQGKTLQKLGKHQKAKKSYKKALKIDP 387


>gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
          Length = 125

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 13/120 (10%)

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQVQLKLGD 312
             + ++YNL  +Y+ +GDY++A  YY  +++        ++P     +Y LG    K GD
Sbjct: 7   NSAEAWYNLGNAYYKQGDYDEAIEYYQKALE--------LYPNNAEAWYNLGNAYYKQGD 58

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           +  A+  ++K LE+YP+N E    LG+ Y + G  ++A E  +KA ++ P +A+A  +LG
Sbjct: 59  YDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNLG 118



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y LG    K GD+  A+  ++K LE+YP+N E    LG+ Y + G  ++A E  +KA +
Sbjct: 12  WYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71

Query: 360 IDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGE 399
           + P +A+A+ +LG       D   A++ ++ A  L     E
Sbjct: 72  LYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAE 112



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 16/116 (13%)

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
           L N ++  G +    +  + AL +    P  + ++YNL  +Y+ +GDY++A  YY  +++
Sbjct: 15  LGNAYYKQGDYDEAIEYYQKALELY---PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71

Query: 289 EINKPHEFIFP-----YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
                   ++P     +Y LG    K GD+  A+  ++K LE+YP+N E  + LG+
Sbjct: 72  --------LYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNLGN 119



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LG    KQ + +E    A +YY KA  +  +    W   G     +G+ ++A   ++  L
Sbjct: 15  LGNAYYKQGDYDE----AIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKAL 70

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           E   +N  A        + +G Y +++E+Y++AL+++P+
Sbjct: 71  ELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPN 109


>gi|268317305|ref|YP_003291024.1| hypothetical protein Rmar_1752 [Rhodothermus marinus DSM 4252]
 gi|262334839|gb|ACY48636.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 409

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 23/259 (8%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
           RG++ +++  ++R L + P+       GIG    +LG+   AR A + AL+ D    EA 
Sbjct: 117 RGQFREAIALFRRELALRPNALSW--RGIGRAYAELGRPDSARLALETALRYDSTYAEAW 174

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
           + LA  +L  NE     + +   +RA+E+ P   +A   L N    TGQ      L E+ 
Sbjct: 175 LDLA--ELNENEGR-YDEALRAARRAWELAPKSLVARYRLGNLLLLTGQPAQARPLLES- 230

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKA--------------GLYYMASVKEINKPHE 295
             V    P    ++Y+L R     G+ E A                   A +   N P +
Sbjct: 231 --VVQEAPWHQAAHYSLGRVLQQLGETEAARRMLERAEALRALQAKVEQAELLVANTPRD 288

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
             + Y  LG +  +LG +R AL  ++    + PD+ E    +  +++ LG+ ++A  LL 
Sbjct: 289 -PYAYATLGSLLRRLGQYREALYAYQVAHFLAPDHLEFQNNMAVLHLLLGEEDRAIALLE 347

Query: 356 KAAKIDPRDAQAFIDLGEL 374
            A + D      +I+LG L
Sbjct: 348 AAVQRDTTFVDGWINLGIL 366


>gi|326435520|gb|EGD81090.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 819

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 30/250 (12%)

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT-----NHGPTKSHSYYN 265
           K++   E +P  A   N L N +   G +    +L E ALA+         P+ + +Y N
Sbjct: 342 KVETLGEKHPSTAETYNNLGNAYARKGDYDKAIELYEKALAIKVETLGEKHPSTAETYNN 401

Query: 266 LARSYHSKGDYEKAGLYY----MASVKEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNF 320
           L  +Y SKGDY++A  +Y      +V+ + + H      Y  LG      G +  A+  +
Sbjct: 402 LGSAYASKGDYDRAIAFYEKDLAITVETLGEKHPSTADTYNNLGNAYYSKGAYDRAIHFY 461

Query: 321 EKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRD 364
           EK L I        +P   +T   LG  Y   G+ ++A     +A  I         P  
Sbjct: 462 EKALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQALAITVEVLGKKHPST 521

Query: 365 AQAFIDLGELLIS-SDTGAALDAFKTARTLLKKA-GEEVPIE--VLNNIGVIHFEKGEFE 420
           AQ + +LG    +  D G A++ ++ AR +  +A GE+ P     L NIG++H ++GE E
Sbjct: 522 AQTYNNLGNAYKNKGDYGKAIECYEKARAVYVEALGEKHPYTAMTLANIGLLHDKRGEKE 581

Query: 421 SAHQSFKDAL 430
            A    + AL
Sbjct: 582 QACAYTQQAL 591



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 95/226 (42%), Gaps = 34/226 (15%)

Query: 237 GQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASV 287
           G+H       ETALA+        G   +  Y NL  +Y SKG Y++A  YY       V
Sbjct: 284 GEHDRAIAYFETALAIRLRTEGEKGGNVAVLYNNLGNAYFSKGAYDRAIHYYDKALAIKV 343

Query: 288 KEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALG 338
           + + + H      Y  LG    + GD+  A+  +EK L I        +P   ET   LG
Sbjct: 344 ETLGEKHPSTAETYNNLGNAYARKGDYDKAIELYEKALAIKVETLGEKHPSTAETYNNLG 403

Query: 339 HIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGA---ALDAF 387
             Y   G  ++A     K   I         P  A  + +LG    S   GA   A+  +
Sbjct: 404 SAYASKGDYDRAIAFYEKDLAITVETLGEKHPSTADTYNNLGNAYYSK--GAYDRAIHFY 461

Query: 388 KTARTLLKKA-GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           + A  +  +A GE+ P   +  NN+G+ +  KGE++ A   ++ AL
Sbjct: 462 EKALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQAL 507



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 130/317 (41%), Gaps = 52/317 (16%)

Query: 90  GQLLLAKGEVEQASSAFKIVL------EADRD-NVPAL---LGQACVEFNRGRYSDSLEF 139
           G +L   GE ++A + F+  L      E ++  NV  L   LG A   F++G Y  ++ +
Sbjct: 277 GAVLSDFGEHDRAIAYFETALAIRLRTEGEKGGNVAVLYNNLGNA--YFSKGAYDRAIHY 334

Query: 140 YKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           Y +AL +        HPS        +G    + G   KA + +++AL +  E +     
Sbjct: 335 YDKALAIKVETLGEKHPSTAETYN-NLGNAYARKGDYDKAIELYEKALAIKVETLGEKHP 393

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAF-------------EIYPYCAMALNYLANHFFFTGQ 238
                     +A   KG      AF             E +P  A   N L N ++  G 
Sbjct: 394 STAETYNNLGSAYASKGDYDRAIAFYEKDLAITVETLGEKHPSTADTYNNLGNAYYSKGA 453

Query: 239 -----HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASVKE 289
                HF  + L  TA A+    P+ + +Y NL  +Y +KG+Y++A  +Y      +V+ 
Sbjct: 454 YDRAIHFYEKALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQALAITVEV 513

Query: 290 INKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEIY--------PDNCETLKALGHI 340
           + K H      Y  LG      GD+  A+  +EK   +Y        P    TL  +G +
Sbjct: 514 LGKKHPSTAQTYNNLGNAYKNKGDYGKAIECYEKARAVYVEALGEKHPYTAMTLANIGLL 573

Query: 341 YVQLGQIEKAQELLRKA 357
           + + G+ E+A    ++A
Sbjct: 574 HDKRGEKEQACAYTQQA 590


>gi|183222246|ref|YP_001840242.1| TPR repeat-containing signal peptide [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912298|ref|YP_001963853.1| TPR repeat-containing lipoprotein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776974|gb|ABZ95275.1| TPR-repeat-containing lipoprotein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167780668|gb|ABZ98966.1| TPR-repeat-containing protein; putative signal peptide [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 1197

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 137/328 (41%), Gaps = 36/328 (10%)

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
           AL+     EF +G    SLE  K ++Q      G   LG     Y+LG    A+ A+++ 
Sbjct: 48  ALIADGSNEFQKGNMDVSLEKAKSSIQTFELVEGYALLGA--SHYQLGDYENAKIAYEKG 105

Query: 179 LQLDPENVEALVALAVMD--LQANEAA-GIRKGMEKMQRAFEIYPY-------------- 221
             LDP+N + L+ L  +   L  NEAA    + + K++    IY Y              
Sbjct: 106 NNLDPQNEKILIGLGTVQSTLGENEAALSTYQTLNKLKPEESIYTYKTGILLKNLGRYQE 165

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
             + L  L +   F     L+ QL +  L +           Y  A SY +K +     L
Sbjct: 166 SLVTLKSLEDKQDFPYPVELLNQLGDVCLELKK---------YEEAESYFAKAEKLNPEL 216

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
                 K   K    I      G   L   ++  A   F+K  E+ P N      LG+  
Sbjct: 217 KSAKDAKLSTKIASLI----QRGNDFLNKKNYTEATAEFKKASELQPQNGSVWSFLGNAQ 272

Query: 342 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEV 401
           +  G++++++E  +K+  +   +A A++ L  +LI +   +  D  KT++  L+K  +  
Sbjct: 273 LLNGKLKESEESFKKSISLSDTNANAYVGLCNVLIQTHNYS--DCLKTSKQALQKIPKNA 330

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDA 429
             E+ N  G+  ++ GE + A  SF+D+
Sbjct: 331 --EIRNKQGICEWKWGEVKKATLSFQDS 356



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 130/323 (40%), Gaps = 52/323 (16%)

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           ++++  AT  + KAS +     S W   G   L  G+++++  +FK  +     N  A +
Sbjct: 241 KKNYTEATAEFKKASELQPQNGSVWSFLGNAQLLNGKLKESEESFKKSISLSDTNANAYV 300

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G   V      YSD L+  K+ALQ  P     IR   G+C +K G++ KA  +FQ +   
Sbjct: 301 GLCNVLIQTHNYSDCLKTSKQALQKIPKN-AEIRNKQGICEWKWGEVKKATLSFQDSSSW 359

Query: 182 DPENVEALVALAVMDLQA---NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           DP  +E  + LA + + +   +EA  + K  E   +A +     A  L   +  F  +G 
Sbjct: 360 DPNFMEPKMNLAYVLIDSGRYDEALDVLKKAETHPKAKKEDIRKAKILAE-SQKFIASGD 418

Query: 239 HFLVEQLTE-------TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
            FL +   +        A+ V    P   ++Y    R+Y +  +Y+KA   Y+ + +  N
Sbjct: 419 SFLRQGKRKQAFDEYGKAMGVNPENPAVQNAY---GRAYFAFSEYKKAEGSYLEAYRLDN 475

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
                                                 N   L+ L  +Y + G+ +K +
Sbjct: 476 -------------------------------------TNPGALQGLARVYAKTGESKKEK 498

Query: 352 ELLRKAAKIDPRDAQAFIDLGEL 374
           E ++K   +   D  + I LG +
Sbjct: 499 EFIKKLETLSATDPFSAITLGRI 521


>gi|118381790|ref|XP_001024055.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89305822|gb|EAS03810.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 376

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 125
           A+  Y +A +ID  E       G +    G+VE A   ++ VL+ +  +  A   LG+ C
Sbjct: 5   ASLCYQQALQIDPLEQDLLYNLGTIFNTNGDVENAKKCYEKVLQINPLSYQAHNDLGKIC 64

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
              N+    D+   Y++AL+++P    AI + +G   Y  G +  A+Q +++ALQLD + 
Sbjct: 65  Q--NKKNIEDAKLHYEKALKINPQYCMAI-VNLGTVYYGQGMIEDAQQQYEKALQLDNKF 121

Query: 186 VEALVALAVMDLQANEAAGIRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            +A   LA++          ++  E+ +Q   E YP    AL  L   +   G +   ++
Sbjct: 122 YQAHFNLALLYDDKGMIEEAKQYYEQTLQANQEYYP----ALYNLGLIYQNEGHY---QE 174

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
                L   +  P    +Y +L   Y S G  E A  Y   +++  NK  +    +  L 
Sbjct: 175 ARRCYLITLDINPQFYQAYISLGCIYFSLGMLEDAQNYCEKALQINNKSLD---AHLNLA 231

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
            +         A  ++E+VL+I P   +    LG IY +   +E+A+    K+ +I+ + 
Sbjct: 232 FIYDSKDMIEEARQSYEQVLQINPKLYQAQNNLGLIYRKKEMLEEAKVCYEKSIQINDQY 291

Query: 365 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESA 422
            QA+ +L    I  D G      + A+  L+KA +  P+  +   N+G+I++ +GE E A
Sbjct: 292 YQAYYNLSS--IYYDQG----NIQEAKQCLEKAIKINPLYDQAHYNLGLIYYNQGELEEA 345

Query: 423 HQSF 426
            + F
Sbjct: 346 KRCF 349



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 142/347 (40%), Gaps = 46/347 (13%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P +    YNL   +++ GD E A   Y   V +IN P  +   +  LG++     +   A
Sbjct: 17  PLEQDLLYNLGTIFNTNGDVENAKKCY-EKVLQIN-PLSYQ-AHNDLGKICQNKKNIEDA 73

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
             ++EK L+I P  C  +  LG +Y   G IE AQ+   KA ++D +  QA  +L   L+
Sbjct: 74  KLHYEKALKINPQYCMAIVNLGTVYYGQGMIEDAQQQYEKALQLDNKFYQAHFNLA--LL 131

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG----- 431
             D G   +A +     L+   E  P   L N+G+I+  +G ++ A + +   L      
Sbjct: 132 YDDKGMIEEAKQYYEQTLQANQEYYP--ALYNLGLIYQNEGHYQEARRCYLITLDINPQF 189

Query: 432 -------DGIWLTL--------------------LDSKTKTYVIDASASMLQFKDMQLFH 464
                    I+ +L                    LD+      I  S  M++ +  Q + 
Sbjct: 190 YQAYISLGCIYFSLGMLEDAQNYCEKALQINNKSLDAHLNLAFIYDSKDMIE-EARQSYE 248

Query: 465 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
           +       +    N + +++    +LE+      A V Y   +     Y  AY  L++I 
Sbjct: 249 QVLQINPKLYQAQNNLGLIYRKKEMLEE------AKVCYEKSIQINDQYYQAYYNLSSIY 302

Query: 525 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 571
             + N+Q + + + +A+K+N  Y  A   LG +     +  +AK  F
Sbjct: 303 YDQGNIQEAKQCLEKAIKINPLYDQAHYNLGLIYYNQGELEEAKRCF 349



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 45/296 (15%)

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM--------------- 212
           + +A   +Q+ALQ+DP   + L  L  +     +    +K  EK+               
Sbjct: 2   MKEASLCYQQALQIDPLEQDLLYNLGTIFNTNGDVENAKKCYEKVLQINPLSYQAHNDLG 61

Query: 213 ----------------QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
                           ++A +I P   MA+  L   ++  G     +Q  E AL + N  
Sbjct: 62  KICQNKKNIEDAKLHYEKALKINPQYCMAIVNLGTVYYGQGMIEDAQQQYEKALQLDNKF 121

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
                +++NLA  Y  KG  E+A  YY  +++      E+    Y LG +    G ++ A
Sbjct: 122 ---YQAHFNLALLYDDKGMIEEAKQYYEQTLQ---ANQEYYPALYNLGLIYQNEGHYQEA 175

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              +   L+I P   +   +LG IY  LG +E AQ    KA +I+ +   A ++L  +  
Sbjct: 176 RRCYLITLDINPQFYQAYISLGCIYFSLGMLEDAQNYCEKALQINNKSLDAHLNLAFIYD 235

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           S D        + AR   ++  +  P   +  NN+G+I+ +K   E A   ++ ++
Sbjct: 236 SKDM------IEEARQSYEQVLQINPKLYQAQNNLGLIYRKKEMLEEAKVCYEKSI 285


>gi|365901831|ref|ZP_09439657.1| TPR repeat protein [Bradyrhizobium sp. STM 3843]
 gi|365417441|emb|CCE12199.1| TPR repeat protein [Bradyrhizobium sp. STM 3843]
          Length = 732

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 167/398 (41%), Gaps = 41/398 (10%)

Query: 41  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 100
           LN LGV +   G+ +           LA  +Y++A  +       W  +G LL A G   
Sbjct: 45  LNLLGVIHMARGRNQ-----------LALAHYDRALALRPDFVEAWSNRGALLKAMGRQA 93

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
            A  +F   L    D+   +  +A V    GR+ ++L +Y RAL + P+ P A+    G+
Sbjct: 94  DALDSFDRALALRADHAGVINNRAGVLQELGRFDEALAYYDRALALQPAYPEALN-NRGV 152

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
               LG+  +A +++ +AL L P+ VEALV      L  +E A   + +     A  + P
Sbjct: 153 VLQALGRHVEALESYAKALALRPDFVEALVN---RGLTYSELARFEEALADYDGALALEP 209

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKSHSYYNLARSYHSKGDY 276
                LN  A      G+          ALA+    P    ++  + ++L R+  ++ DY
Sbjct: 210 KHVDVLNNRAIALRRLGRPEEALASHSAALALRPKDPKALVSRGLTLHDLKRTEAAQADY 269

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
           ++A          I      +  +   G +  +LG    AL +FE+ L + PDN   L  
Sbjct: 270 DRA----------IALQPGHVDAFVNRGALLHELGRHDEALRSFERALALQPDNVHALTN 319

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF----IDLGELLISSDTGAALDAFKTART 392
            G +   L +  +A     +A  I P DA A     + L +L    +  A+ D   +AR 
Sbjct: 320 RGVVLHDLARYGEALADHDQAISIQPGDAAALNNRGVTLHKLRRLEEALASQDQAISAR- 378

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                 ++ P E L N G+I ++   F+ A   +  A+
Sbjct: 379 ------QDYP-EALVNRGIILYDLKRFDEAQADYDRAI 409


>gi|354594397|ref|ZP_09012436.1| hypothetical protein CIN_11320 [Commensalibacter intestini A911]
 gi|353672073|gb|EHD13773.1| hypothetical protein CIN_11320 [Commensalibacter intestini A911]
          Length = 622

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 15/291 (5%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
           +  G  LL+KG++++A   F  +L  D +   AL G+ACV    G ++ ++ F  +A++ 
Sbjct: 7   ISNGLSLLSKGQIQEADEIFCDILTKDPNFSEALYGRACVARASGNHALAIAFAGQAIEQ 66

Query: 147 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD--LQANEAAG 204
                  I LG+ L  Y+ G + +A  A + A+ L+  +  A  ALA++   +  N AA 
Sbjct: 67  KSLSYYYIPLGLSL--YEQGHVAEAEAALKSAVLLNAYDPRAHHALALVQEAIDENSAAE 124

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +       ++A E+ P        L   F++ G+ F  +Q    A     +   K    +
Sbjct: 125 L-----SFRKAIELVPASITYWQALIR-FYWQGEAF--DQALNIAKDAVKYNTGKIEFLH 176

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
            LA      G    A   +    K I    + I  Y  LG V  KL   + A  N     
Sbjct: 177 ELALLLERMGMLGDAERVFR---KMIRLNPQSISTYANLGAVLFKLNRLKEAKENLTYAF 233

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           E  PD  ET   LG + + LG++  A+ LL+ A +  P D++  ++LG +L
Sbjct: 234 EHEPDVIETQVNLGLVQMALGELLAAKALLQDAYQKAPTDSRIGLNLGTVL 284


>gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657, partial [Trichodesmium erythraeum
           IMS101]
 gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 594

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 152/337 (45%), Gaps = 40/337 (11%)

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
           A + +A V+F    Y  ++  Y R L+++P+ P A     G C  +LG+  +A+  +   
Sbjct: 147 AYVQRADVDFRLNNYQQAISIYDRGLRLNPNLPLAY-YDQGRCFLQLGKKKQAQDCWHEG 205

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-------YPYCAMALNYLAN 231
           L++ P+  +       +  Q  E +   K +E+ Q A  +       Y + AMA + L N
Sbjct: 206 LKIIPKTSDDYNTRGAILSQLEEHS---KALEEFQEALRLNNNNIGAYVHRAMAHSALGN 262

Query: 232 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG-DYEKAGLYYMASVKEI 290
           H         V    + AL++ +          N A  Y  +G  +E+ G    A ++E 
Sbjct: 263 HQ-------AVMDNFDKALSLNS----------NDADIYGWRGIHFEQTGELKKA-IEEF 304

Query: 291 NKP----HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
           +K     +++   Y   G+    LG+ + A+ +F + LEI P+N     ALG  Y+ L  
Sbjct: 305 DKALQINYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPNNSYAYDALGTAYLYLND 364

Query: 347 IEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEV 405
           IE+A++  +KA K++P +  A   +G +         A+ A++ A  +  K  +      
Sbjct: 365 IEEAEQKFKKALKLNPNNPLAHCGIGVVFGFKEKWEEAIAAYQEALCIEPKLAQGY---- 420

Query: 406 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 442
            + +G   F +G+ + A  ++K ALG     T++ +K
Sbjct: 421 -DGLGQAFFMQGKLDEAIHAYKKALGIAPNFTIVHNK 456



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 148/350 (42%), Gaps = 16/350 (4%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G +L    E  +A   F+  L  + +N+ A + +A      G +   ++ + +AL ++ 
Sbjct: 219 RGAILSQLEEHSKALEEFQEALRLNNNNIGAYVHRAMAHSALGNHQAVMDNFDKALSLN- 277

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
           S    I    G+   + G+L KA + F +ALQ+   N +  V  A      +     ++ 
Sbjct: 278 SNDADIYGWRGIHFEQTGELKKAIEEFDKALQI---NYKYTVVYAERGKCYSWLGNQQEA 334

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
           ++   RA EI P  + A + L   + +       EQ  + AL +  + P    ++  +  
Sbjct: 335 IKDFNRALEIAPNNSYAYDALGTAYLYLNDIEEAEQKFKKALKLNPNNPL---AHCGIGV 391

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            +  K  +E+A   Y  ++    +P +    Y GLGQ     G    A+  ++K L I P
Sbjct: 392 VFGFKEKWEEAIAAYQEAL--CIEP-KLAQGYDGLGQAFFMQGKLDEAIHAYKKALGIAP 448

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAF 387
           +       LG    Q  + ++A    ++A  +DP  A A  +LG  L+  D T   +   
Sbjct: 449 NFTIVHNKLGVALEQQKKEDEAVAAYKEAISLDPNFATARANLGYALLKQDRTTDGIANL 508

Query: 388 KTARTLLKKAGEEVPIEVLNNIGV-----IHFEKGEFESAHQSFKDALGD 432
           K AR L +   ++     ++N         H+ KGE  S    +++A+ +
Sbjct: 509 KKARDLFQTQNQDKEASKIDNFLCKRESESHYRKGEKLSKQGKYQEAIAE 558


>gi|304315338|ref|YP_003850485.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588797|gb|ADL59172.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 386

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 44/295 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y +A +ID  +  TW  KG LL   G+ E+A   ++  LE ++ N  A   +    
Sbjct: 103 ALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWYNKGNGL 162

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + G+Y ++LE Y++ALQ++     A      L   +L +  +A + ++RALQ+DPE+  
Sbjct: 163 RSLGKYEEALECYEKALQINAEFVEAW-YNKALILEELKRYDEALECYERALQIDPED-- 219

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                   D   N    +   + K ++A E Y   A+ +N   N   +  +  ++E+L  
Sbjct: 220 --------DGTWNNKGALLDTIGKPEKAIECYEK-ALEINQ-KNAKAWNNKGVVLEELKR 269

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
              A+                       YEKA         EIN  ++  +   G+  + 
Sbjct: 270 YDEALEC---------------------YEKA--------LEINLENDETWANKGV--LL 298

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            KLG +  AL  FEK LEI P+  +  K  G I   L + E+A +  ++A K++P
Sbjct: 299 RKLGKYEEALECFEKALEINPEFADAWKWKGIILEDLKKPEEALKCHKQALKLNP 353



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 146/336 (43%), Gaps = 28/336 (8%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + + KA +   ++P         LL     E+A   ++ +L+ +     A   +  V 
Sbjct: 35  ALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALECYEKILKNNPKLAEAWNNKGVVL 94

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
               RY ++LE Y+RALQ+ P   G      G     +G+  KA + +++AL+++ +N +
Sbjct: 95  KELKRYDEALECYERALQIDPEDDGTWN-NKGALLDTIGKPEKAIECYEKALEINQKNAK 153

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE---- 243
           A           N+  G+R  + K + A E Y   A+ +N      ++     L E    
Sbjct: 154 AWY---------NKGNGLR-SLGKYEEALECYEK-ALQINAEFVEAWYNKALILEELKRY 202

Query: 244 ----QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
               +  E AL +    P    ++ N      + G  EKA   Y  ++ EIN+ +   + 
Sbjct: 203 DEALECYERALQID---PEDDGTWNNKGALLDTIGKPEKAIECYEKAL-EINQKNAKAWN 258

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
             G+   +LK  D   AL  +EK LEI  +N ET    G +  +LG+ E+A E   KA +
Sbjct: 259 NKGVVLEELKRYD--EALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALE 316

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
           I+P  A A+   G  +I  D     +A K  +  LK
Sbjct: 317 INPEFADAWKWKG--IILEDLKKPEEALKCHKQALK 350



 Score = 39.7 bits (91), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 43/82 (52%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y KA  I++    TW  KG LL   G+ E+A   F+  LE + +   A   +  + 
Sbjct: 273 ALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWKWKGIIL 332

Query: 128 FNRGRYSDSLEFYKRALQVHPS 149
            +  +  ++L+ +K+AL+++P 
Sbjct: 333 EDLKKPEEALKCHKQALKLNPP 354


>gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
 gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
          Length = 463

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 12/215 (5%)

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
           +A E  PY AM    LAN +   G++ L  +  + A+A+    PT S +YYNL  +++ +
Sbjct: 72  KALEFDPYMAMGRYLLANTYLQQGKNQLALEQYQIAIALD---PTLSQAYYNLGIAFYKE 128

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G  + A   Y  ++   N     I  YY LG      G+   A+ +++  + + PD  + 
Sbjct: 129 GAPDSAIAAYRQALS-FNPESADI--YYNLGLALESQGNQEEAIEHYQATIRLDPDYGKA 185

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTART 392
              +G I V+  QI  A   LR+A +  P+  +A   LG LL+   +  AA ++F+ A  
Sbjct: 186 YYNMGLILVEQDQIGPATTALRQAVRTQPKLVKAHYQLGLLLVEQGEKSAAEESFREAVK 245

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
           +  K     P +    + VI FEKGE   A   F+
Sbjct: 246 VDPKLA---PAQY--QLAVILFEKGELAEAITRFR 275



 Score = 46.2 bits (108), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 123/298 (41%), Gaps = 28/298 (9%)

Query: 84  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           +++   G  L  + +   A  AF+  LE D          A     +G+   +LE Y+ A
Sbjct: 48  ASYFQVGVKLYGRRDFPGAERAFRKALEFDPYMAMGRYLLANTYLQQGKNQLALEQYQIA 107

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV-MDLQANEA 202
           + + P+   A    +G+  YK G    A  A+++AL  +PE+ +    L + ++ Q N+ 
Sbjct: 108 IALDPTLSQAY-YNLGIAFYKEGAPDSAIAAYRQALSFNPESADIYYNLGLALESQGNQ- 165

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ----LTETAL--AVTNHG 256
               + +E  Q    + P    A        ++     LVEQ       TAL  AV    
Sbjct: 166 ---EEAIEHYQATIRLDPDYGKA--------YYNMGLILVEQDQIGPATTALRQAVRTQ- 213

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK--PHEFIFPYYGLGQVQLKLGDFR 314
           P    ++Y L      +G+   A   +  +VK   K  P +     Y L  +  + G+  
Sbjct: 214 PKLVKAHYQLGLLLVEQGEKSAAEESFREAVKVDPKLAPAQ-----YQLAVILFEKGELA 268

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
            A+T F  V E+ P+N +  + LG      G+  +A   L+ A ++DP  A    +LG
Sbjct: 269 EAITRFRLVTELEPENVDAYRQLGAALTANGEYAEAVTTLKLAVQLDPYHALTHYNLG 326


>gi|225850059|ref|YP_002730293.1| hypothetical protein PERMA_0503 [Persephonella marina EX-H1]
 gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
          Length = 559

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 185/464 (39%), Gaps = 88/464 (18%)

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           E+  E    +    P K   YY LAR Y  + + E+A       +K + K  E I P Y 
Sbjct: 147 EKAKEVLFKIAKISPKKPRVYYTLARIYLFQNNKEEA-------IKHLKKALE-IEPLYQ 198

Query: 303 -----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
                LG++ L+   F+ A   + KVLE  P++ E L  L  +YVQ  Q +KA+E++ + 
Sbjct: 199 PAYVLLGELYLQDRKFKEAEKVYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRI 258

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
            KIDP +  A +    L +  + G            L++  +E P    +N  V+     
Sbjct: 259 VKIDPSNKDALLKKFLLYLRENKGE------EIIRELEELAKEEP----DNPTVLSILGM 308

Query: 418 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 477
            +ESA Q +K A  + I+L +L                         + E + + +    
Sbjct: 309 AYESA-QRYKKA--EEIYLKVL-------------------------KLEPENSEI---- 336

Query: 478 NKVTVLFNLARLLEQIHDT----VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
                   L RL E    T     A  VL RL     +DY    L +A I   R NL  +
Sbjct: 337 --------LERLAEVYTRTGQYEKALDVLNRLYSLDPRDY-RVLLIMADIENKRGNLDAA 387

Query: 534 IELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA-TDGKDSYATLSLGNW 592
           +  + EA  +N K P      G    K D W KA+E F+ A +   D  D     +L  +
Sbjct: 388 LSYIQEAKSINDKDPTIYFFEGIYYEKLDQWDKAEEAFKKALELRPDFPD-----ALNYY 442

Query: 593 NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 652
            Y   +RN  R        + KA EL     V  ++    + G G    +KG++  +   
Sbjct: 443 GYSLIIRN--RDIDRAMDMIRKALEL-----VPDSAAYLDSLGWGYF--KKGEYLKALKY 493

Query: 653 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
             Q  + A        P V  +LA V  A GN   A+K+Y+  L
Sbjct: 494 IKQAYQKAPDD-----PVVTEHLAEVEEALGNKEEALKLYRKAL 532



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 152/331 (45%), Gaps = 27/331 (8%)

Query: 46  VYYTYLGKIETKQREKEEHFILATQYYNKASRID-MHEPSTWVGKGQLLLAKGEVEQASS 104
           VYYT L +I   Q  KEE    A ++  KA  I+ +++P+ +V  G+L L   + ++A  
Sbjct: 166 VYYT-LARIYLFQNNKEE----AIKHLKKALEIEPLYQPA-YVLLGELYLQDRKFKEAEK 219

Query: 105 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
            +  VLE D +++ AL     V     ++  + E   R +++ PS   A+ L   L   +
Sbjct: 220 VYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRIVKIDPSNKDAL-LKKFLLYLR 278

Query: 165 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
             +  +  +  +   + +P+N      L+++ +    A   +K  E   +  ++ P  + 
Sbjct: 279 ENKGEEIIRELEELAKEEPDNP---TVLSILGMAYESAQRYKKAEEIYLKVLKLEPENSE 335

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAG 280
            L  LA  +  TGQ+       E AL V N      P        +A   + +G+ + A 
Sbjct: 336 ILERLAEVYTRTGQY-------EKALDVLNRLYSLDPRDYRVLLIMADIENKRGNLD-AA 387

Query: 281 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH- 339
           L Y+   K IN     I  Y+  G    KL  +  A   F+K LE+ PD  + L   G+ 
Sbjct: 388 LSYIQEAKSINDKDPTI--YFFEGIYYEKLDQWDKAEEAFKKALELRPDFPDALNYYGYS 445

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           + ++   I++A +++RKA ++ P D+ A++D
Sbjct: 446 LIIRNRDIDRAMDMIRKALELVP-DSAAYLD 475



 Score = 46.6 bits (109), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 54/299 (18%)

Query: 135 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
           ++++  K+AL++ P    A  L +G    +  +  +A + + + L+ DP ++EAL  L  
Sbjct: 182 EAIKHLKKALEIEPLYQPAYVL-LGELYLQDRKFKEAEKVYLKVLEKDPNDLEALNRLFQ 240

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
           + +QA++    +K  E + R  +I P    AL      F    +    E++      +  
Sbjct: 241 VYVQADQ---FKKAEEIINRIVKIDPSNKDAL---LKKFLLYLRENKGEEIIRELEELAK 294

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P        L  +Y S   Y+KA   Y+                              
Sbjct: 295 EEPDNPTVLSILGMAYESAQRYKKAEEIYL------------------------------ 324

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
                  KVL++ P+N E L+ L  +Y + GQ EKA ++L +   +DPRD +  + + + 
Sbjct: 325 -------KVLKLEPENSEILERLAEVYTRTGQYEKALDVLNRLYSLDPRDYRVLLIMAD- 376

Query: 375 LISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            I +  G   AAL   + A+++  K       E     G+ + +  +++ A ++FK AL
Sbjct: 377 -IENKRGNLDAALSYIQEAKSINDKDPTIYFFE-----GIYYEKLDQWDKAEEAFKKAL 429


>gi|427707826|ref|YP_007050203.1| hypothetical protein Nos7107_2446 [Nostoc sp. PCC 7107]
 gi|427360331|gb|AFY43053.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 708

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 144/333 (43%), Gaps = 19/333 (5%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN A ++D      +  +G      G+ + A + +   ++ + + V A   +    ++ G
Sbjct: 374 YNLAIKVDPGNSEAYYNRGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLG 433

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 190
            Y  ++  Y +A++++P+   A   G G  RY LG    A   +  AL+ +P N EA   
Sbjct: 434 DYQGAIADYTQAVKINPNHSSAYN-GRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYN 492

Query: 191 -ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
              A  DL+ + AA     +     A ++ P  + A N   N F++ G+    + L + +
Sbjct: 493 RGNARSDLKDSPAA-----IADYNEAIKLNPNYSAAYNGRGNAFYYLGEK--QKALADYS 545

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
            A+ +     S +YYN    Y   G+ + A   Y  ++K IN    + + Y   G  +  
Sbjct: 546 QAIKSDA-NNSEAYYNRGNVYFDLGNKKGAISDYTQAIK-INP--NYAYAYNNRGNTKYD 601

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           L D + AL ++ + L++ P+         ++Y  LG +E A     +A   +   AQA+ 
Sbjct: 602 LNDLQGALADYNQALKLLPNYAFAYYNRANVYKNLGDLEGAIADYNRAIINNSNYAQAYQ 661

Query: 370 DLGELLISSDTG---AALDAFKTARTLLKKAGE 399
           + G  L   D G   A +   + A  L K+ G 
Sbjct: 662 NRG--LARYDLGEQQAGISDLEIAANLYKEQGN 692



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 15/280 (5%)

Query: 94  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
           L K EV   S       +AD         Q   ++ +G Y  ++E Y +A+ ++P    A
Sbjct: 231 LPKAEVGAVSQPTPTAPKADD-----FYIQGGDKYKKGDYKGAIEAYNQAISINPKYSYA 285

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 213
                G  RY LG    A + + +A++++PE   A      +    ++    R  +    
Sbjct: 286 YN-DRGNARYYLGDKQGALKDYNQAIKINPEYAFAYYNRGNILYDFDDK---RGALADYN 341

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
           +A ++ P  + A N   N  +  G       L +  LA+    P  S +YYN   +    
Sbjct: 342 QALKLNPNYSSAYNNRGNSHYALGDK--QRALADYNLAIKVD-PGNSEAYYNRGNTRAIL 398

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           GD + A   Y  ++K IN    ++F Y   G  +  LGD++ A+ ++ + ++I P++   
Sbjct: 399 GDKQGAITDYNQAIK-INP--NYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSSA 455

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
               G+    LG  + A      A K +P +A+A+ + G 
Sbjct: 456 YNGRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGN 495



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 68/325 (20%), Positives = 135/325 (41%), Gaps = 18/325 (5%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
           I+   + K+  +  A + YN+A  I+      +  +G      G+ + A   +   ++ +
Sbjct: 254 IQGGDKYKKGDYKGAIEAYNQAISINPKYSYAYNDRGNARYYLGDKQGALKDYNQAIKIN 313

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
            +   A   +  + ++      +L  Y +AL+++P+   A     G   Y LG   +A  
Sbjct: 314 PEYAFAYYNRGNILYDFDDKRGALADYNQALKLNPNYSSAYN-NRGNSHYALGDKQRALA 372

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAA--GIRKG-MEKMQRAFEIYPYCAMALNYLA 230
            +  A+++DP N EA         + N  A  G ++G +    +A +I P    A N   
Sbjct: 373 DYNLAIKVDPGNSEAYYN------RGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRG 426

Query: 231 NHFFFTGQH-FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
           N  +  G +   +   T+      NH    S +Y     S +  GD + A   Y  ++K 
Sbjct: 427 NTRYDLGDYQGAIADYTQAVKINPNH----SSAYNGRGNSRYYLGDKQGALNDYTLALKA 482

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
                E    YY  G  +  L D  +A+ ++ + +++ P+        G+ +  LG+ +K
Sbjct: 483 NPNNAE---AYYNRGNARSDLKDSPAAIADYNEAIKLNPNYSAAYNGRGNAFYYLGEKQK 539

Query: 350 AQELLRKAAKIDPRDAQAFIDLGEL 374
           A     +A K D  +++A+ + G +
Sbjct: 540 ALADYSQAIKSDANNSEAYYNRGNV 564


>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
          Length = 733

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 149/342 (43%), Gaps = 22/342 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           L  +G +++A   +  +++A  +N         +    GR+ + +   ++AL++ P+   
Sbjct: 24  LFQEGRIKEAEEIYTRLIKAGTNNHLTYGSLGIIYGIEGRWQELIAILEKALKLEPNYSD 83

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A    IG+   +L  L  A ++FQ+AL ++P   ++   L    L   E   +   +  +
Sbjct: 84  AHNY-IGIALKRLDNLEAAVESFQKALSINPNCPKSNYNLGNALL---EEGKLDSAIAFL 139

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH---GPTKSHSYYNLARS 269
           + A +  P  + A      H+     +  ++ +      + N     P    ++ +L  +
Sbjct: 140 KTAVDFKPDFSEA------HYNLGIAYLAIDNIAAAINYLNNSLHLKPAFPEAHNSLGLA 193

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
             +KG+     L   + +K +    EF    Y LG + L  GD  +A+  F K L +  +
Sbjct: 194 LQAKGE---KNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFNKALLLKWN 250

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFK 388
             E L  LG  +   G+I  A    RKA +I     + + +LG + L   +   A++ FK
Sbjct: 251 YPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFK 310

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            A  L     E  P E LNN+G    EKGE ++A  ++K AL
Sbjct: 311 KALIL----KENYP-EALNNLGNSLQEKGELDAAIAAYKKAL 347



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 136/329 (41%), Gaps = 44/329 (13%)

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
           ++E +++AL ++P+CP +    +G    + G+L  A    + A+   P+  EA   L + 
Sbjct: 101 AVESFQKALSINPNCPKS-NYNLGNALLEEGKLDSAIAFLKTAVDFKPDFSEAHYNLGIA 159

Query: 196 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
            L  +  A     +  +  +  + P    A N L       G+  L       AL +   
Sbjct: 160 YLAIDNIAA---AINYLNNSLHLKPAFPEAHNSLGLALQAKGEKNLAISSFIKALEIK-- 214

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYY-MASVKEINKPHEFI----------------- 297
            P    + YNL   Y ++GD E A  Y+  A + + N P                     
Sbjct: 215 -PEFPEACYNLGFIYLNQGDIETAINYFNKALLLKWNYPEALNNLGIAFKAKGEISPAIN 273

Query: 298 -----------FP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
                      FP  YY LG + L  G+  +A+  F+K L +  +  E L  LG+   + 
Sbjct: 274 SWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALNNLGNSLQEK 333

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPI 403
           G+++ A    +KA    P   +A  +LG +     D   ++  FK A  L      + P 
Sbjct: 334 GELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKALAL----HPDHP- 388

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDALGD 432
           E+L+N+G    EKG+ E+A  SF +A+ +
Sbjct: 389 EILSNLGTSLEEKGDLEAAISSFNNAISN 417



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 21/258 (8%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           +G    +L +  +A+ +F+K L I P+  ++   LG+  ++ G+++ A   L+ A    P
Sbjct: 88  IGIALKRLDNLEAAVESFQKALSINPNCPKSNYNLGNALLEEGKLDSAIAFLKTAVDFKP 147

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
             ++A  +LG   ++ D  AA   +      LK A    P E  N++G+    KGE   A
Sbjct: 148 DFSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKPA---FP-EAHNSLGLALQAKGEKNLA 203

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASM----LQFKDMQLFHRFENDGNHVELPWN 478
             SF  AL           + K    +A  ++    L   D++    + N    + L WN
Sbjct: 204 ISSFIKAL-----------EIKPEFPEACYNLGFIYLNQGDIETAINYFNKA--LLLKWN 250

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
               L NL    +   +   A   +R  L    D+ + Y  L +I   + N++ +I    
Sbjct: 251 YPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFK 310

Query: 539 EALKVNGKYPNALSMLGD 556
           +AL +   YP AL+ LG+
Sbjct: 311 KALILKENYPEALNNLGN 328



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 20/234 (8%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LG  Y   G IET           A  Y+NKA  +  + P      G    AKGE+  A 
Sbjct: 224 LGFIYLNQGDIET-----------AINYFNKALLLKWNYPEALNNLGIAFKAKGEISPAI 272

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           ++++  LE   D          +  ++G    ++ F+K+AL +  + P A+   +G    
Sbjct: 273 NSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALN-NLGNSLQ 331

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVAL-AVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
           + G+L  A  A+++AL   P   EA   L  V   Q +    IR      ++A  ++P  
Sbjct: 332 EKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSIR----IFKKALALHPDH 387

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
              L+ L       G           A++  ++ PT   ++YNL+    SKGDY
Sbjct: 388 PEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPT---AHYNLSLCLLSKGDY 438



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 66/310 (21%), Positives = 115/310 (37%), Gaps = 44/310 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  Y N +  +    P      G  L AKGE   A S+F   LE   +   A      + 
Sbjct: 169 AINYLNNSLHLKPAFPEAHNSLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIY 228

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            N+G    ++ ++ +AL +  + P A+   +G+     G++  A  ++++AL++  +  E
Sbjct: 229 LNQGDIETAINYFNKALLLKWNYPEALN-NLGIAFKAKGEISPAINSWRKALEIKTDFPE 287

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
               L  + L   +   I   +   ++A  +      ALN L N     G+        +
Sbjct: 288 VYYNLGSIYL---DQGNIETAINFFKKALILKENYPEALNNLGNSLQEKGELDAAIAAYK 344

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            AL   NH P+   +  NL   Y ++GD E                              
Sbjct: 345 KAL---NHKPSYREAQNNLGCVYRAQGDLE------------------------------ 371

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
                  +++  F+K L ++PD+ E L  LG    + G +E A      A   +     A
Sbjct: 372 -------NSIRIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPTA 424

Query: 368 FIDLGELLIS 377
             +L   L+S
Sbjct: 425 HYNLSLCLLS 434


>gi|355572129|ref|ZP_09043311.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
           tarda NOBI-1]
 gi|354824845|gb|EHF09084.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
           tarda NOBI-1]
          Length = 660

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 166/391 (42%), Gaps = 52/391 (13%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y++A  ID    S    K Q+L A G  E+A S    +L  +  N    + ++ + 
Sbjct: 215 ALSSYDQALGIDPDSTSVLSKKAQVLAALGRTEEALSTIDRILVLEPGNATYWVHKSFLL 274

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            N GR+++SL+    A+ + P+   A     G     LG  G A  A+ +A+ +DP N  
Sbjct: 275 NNLGRFNESLDASGTAISLEPNNAVAWN-NRGFSYNSLGMFGDAVSAYSQAIAIDPGNPA 333

Query: 188 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A      A+++L   E A     +  + RA  + P  A A +Y A   +  G+    E L
Sbjct: 334 AYTNRGFALLNLGKGEDA-----LGDLDRATTLQPDLATAWSYRALADYRLGR--FTEAL 386

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            + + A T   P  S ++     +   KG+++KA + Y      +N     I+   G+  
Sbjct: 387 DDASRA-TRLNPRDSLAWSTGGMALLQKGEFQKA-IPYFDKALTLNPNASDIWLNKGIAL 444

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCE-------TLKALGH----IYVQLGQIE----KA 350
              K  +   AL+  ++VLE+ P++          L+ALG     +++   Q++      
Sbjct: 445 YMAK--NNEEALSALDRVLELDPESMTAWQYKVYALRALGRGEEAVWITDRQLKTDSWNT 502

Query: 351 QELLRKAAKI-------------------DPRDAQAFIDLGELLISSDTGAALDAFKTAR 391
             LLRKA  +                   DP + +A +  G++ I+S  G  L A +T  
Sbjct: 503 TLLLRKATALVILNRMGEAQLALSRILEKDPSNYEALVARGKIQIAS--GDYLGAIRTFD 560

Query: 392 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
            L K   +    E L  +GV ++  G++E A
Sbjct: 561 VLQKTMPDAD--ESLIFLGVAYYRSGQYEKA 589



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 18/325 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y++A  ID   P+ +  +G  LL  G+ E A            D   A   +A  +
Sbjct: 317 AVSAYSQAIAIDPGNPAAYTNRGFALLNLGKGEDALGDLDRATTLQPDLATAWSYRALAD 376

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           +  GR++++L+   RA +++P    A   G G+   + G+  KA   F +AL L+P   +
Sbjct: 377 YRLGRFTEALDDASRATRLNPRDSLAWSTG-GMALLQKGEFQKAIPYFDKALTLNPNASD 435

Query: 188 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
             +   +A+   + NE A     +  + R  E+ P    A  Y        G+       
Sbjct: 436 IWLNKGIALYMAKNNEEA-----LSALDRVLELDPESMTAWQYKVYALRALGRG------ 484

Query: 246 TETALAVTNHG-PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
            E A+ +T+    T S +   L R   +     + G   +A  + + K           G
Sbjct: 485 -EEAVWITDRQLKTDSWNTTLLLRKATALVILNRMGEAQLALSRILEKDPSNYEALVARG 543

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
           ++Q+  GD+  A+  F+ + +  PD  E+L  LG  Y + GQ EKA  +  K  K DP +
Sbjct: 544 KIQIASGDYLGAIRTFDVLQKTMPDADESLIFLGVAYYRSGQYEKALAVYDKLLKKDPAN 603

Query: 365 AQAFIDLGELLISSDTGAALDAFKT 389
           +  + + G  L+   TG   DA K+
Sbjct: 604 SLTWSNRGYALVK--TGRIQDAIKS 626



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 129/314 (41%), Gaps = 20/314 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 125
           A Q Y++A  +D++  + W G G      G+  +A   F   L  +    PA   LG   
Sbjct: 113 AAQAYDRAIALDINITTAWNGIGTAYSRMGKYTEARQFFLAALRTNGSYAPAAKNLGDTL 172

Query: 126 VEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           V      + ++L  Y +AL + P+    A+  G  L R+  G+ G+A  ++ +AL +DP+
Sbjct: 173 VALQL--WGEALRAYDQALAMDPALASAAVARGDLLSRF--GRNGEALSSYDQALGIDPD 228

Query: 185 NVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           +   L   A    Q   A G   + +  + R   + P    A  ++   F         E
Sbjct: 229 STSVLSKKA----QVLAALGRTEEALSTIDRILVLEP--GNATYWVHKSFLLNNLGRFNE 282

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYG 302
            L  +  A++   P  + ++ N   SY+S G +  A   Y  A   +   P      Y  
Sbjct: 283 SLDASGTAISLE-PNNAVAWNNRGFSYNSLGMFGDAVSAYSQAIAIDPGNPAA----YTN 337

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G   L LG    AL + ++   + PD             +LG+  +A +   +A +++P
Sbjct: 338 RGFALLNLGKGEDALGDLDRATTLQPDLATAWSYRALADYRLGRFTEALDDASRATRLNP 397

Query: 363 RDAQAFIDLGELLI 376
           RD+ A+   G  L+
Sbjct: 398 RDSLAWSTGGMALL 411



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 104/272 (38%), Gaps = 44/272 (16%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           ++  F  A  Y++KA  ++ +    W+ KG  L      E+A SA   VLE D +++ A 
Sbjct: 412 QKGEFQKAIPYFDKALTLNPNASDIWLNKGIALYMAKNNEEALSALDRVLELDPESMTAW 471

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
             +       GR  +++    R L+   S    + L        L ++G+A+ A  R L+
Sbjct: 472 QYKVYALRALGRGEEAVWITDRQLKTD-SWNTTLLLRKATALVILNRMGEAQLALSRILE 530

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            DP N EALVA   + + + +  G  +  + +Q+                          
Sbjct: 531 KDPSNYEALVARGKIQIASGDYLGAIRTFDVLQKTM------------------------ 566

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
                           P    S   L  +Y+  G YEKA   Y    K + K       +
Sbjct: 567 ----------------PDADESLIFLGVAYYRSGQYEKALAVY---DKLLKKDPANSLTW 607

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
              G   +K G  + A+ +F++ LE+ P N +
Sbjct: 608 SNRGYALVKTGRIQDAIKSFDRALELDPKNMD 639



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 76  SRIDMHEPSTW---VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           SRI   +PS +   V +G++ +A G+   A   F ++ +   D   +L+      +  G+
Sbjct: 526 SRILEKDPSNYEALVARGKIQIASGDYLGAIRTFDVLQKTMPDADESLIFLGVAYYRSGQ 585

Query: 133 YSDSLEFYKRALQVHP--SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           Y  +L  Y + L+  P  S   + R   G    K G++  A ++F RAL+LDP+N++A
Sbjct: 586 YEKALAVYDKLLKKDPANSLTWSNR---GYALVKTGRIQDAIKSFDRALELDPKNMDA 640



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G   L+ G+   +L  F++ + I  +N E  +  G     +G+  +A E L ++  +DP 
Sbjct: 33  GDRLLEQGNLEQSLVLFDRAIAINGENVEAWEGRGKALHLMGRESEAFESLNRSLALDPS 92

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV-LNNIGVIHFEKGEFESA 422
            A  ++ LG++L++ D       +  A+   +    ++ I    N IG  +   G++  A
Sbjct: 93  SASRWVALGDVLLAMDQN-----YDAAQAYDRAIALDINITTAWNGIGTAYSRMGKYTEA 147

Query: 423 HQSFKDAL 430
            Q F  AL
Sbjct: 148 RQFFLAAL 155


>gi|428315765|ref|YP_007113647.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428239445|gb|AFZ05231.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 1290

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 132/285 (46%), Gaps = 14/285 (4%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
            L +G++++A +A +  L+   D + A +         G+   ++  Y +AL + P+   
Sbjct: 487 FLVQGKIKEAIAACQQALKIRPDFIYAYVTLGNALQAEGKTEAAIRSYSQALVLQPNF-A 545

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
            +R  IG   +K+G+L +A   +Q+A+ L P+   A   L  +    ++   I   +   
Sbjct: 546 EVRANIGSMYFKMGRLEEAIAHYQQAIALSPDLAGAHWNLGKV---YHQHGNIEAAIACF 602

Query: 213 QRAFEIYPYCAMA---LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           +R  E+ P    A    N L N  F  G+     +  E A+A+    P  + +Y N+  +
Sbjct: 603 KRTSELNPQLVGADFHFN-LGNRLFSQGKRDEAIECYEKAIAIK---PDWAEAYGNIGSA 658

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
              +G+ E A  YY  +V    KPH  +  ++ +    L+   +  A+TN++  L+I PD
Sbjct: 659 RSQQGNLEAAIAYYQKAVAL--KPHLEVL-HFNIANSFLQQNKYDEAITNYQNTLKIKPD 715

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             E    LG+ +   G++E+A    ++A  + P  A+ +  +G +
Sbjct: 716 WPEVHANLGNCFSMQGRLEEALASYQQALGLKPNWAEVYCRMGHI 760



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           GD   A+ N++K LE  P++ E  K L  +Y   G+ EKA      A K  P  A A++ 
Sbjct: 229 GDLGGAIENYQKALEFNPEDAEVHKKLAEVYALQGEFEKAIASCNLAIKFKPNFAAAYLT 288

Query: 371 LGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           +G  L S +    A+ A+  A  +  +  E        N+G ++++ GE E A   ++ A
Sbjct: 289 MGNALHSQNKLEMAIQAYLQALEIQPEFAEASA-----NLGSMYYKLGELEQAANYYQKA 343

Query: 430 L 430
           L
Sbjct: 344 L 344



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 17/269 (6%)

Query: 166 GQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
           G++ +A  A Q+AL++ P+ + A V L   +  +    A IR       +A  + P  A 
Sbjct: 491 GKIKEAIAACQQALKIRPDFIYAYVTLGNALQAEGKTEAAIRS----YSQALVLQPNFAE 546

Query: 225 ALNYLANHFFFTGQHFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
               + + +F  G+  L E +   + A+A++   P  + +++NL + YH  G+ E A + 
Sbjct: 547 VRANIGSMYFKMGR--LEEAIAHYQQAIALS---PDLAGAHWNLGKVYHQHGNIE-AAIA 600

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
                 E+N        ++ LG      G    A+  +EK + I PD  E    +G    
Sbjct: 601 CFKRTSELNPQLVGADFHFNLGNRLFSQGKRDEAIECYEKAIAIKPDWAEAYGNIGSARS 660

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 402
           Q G +E A    +KA  + P       ++    +  +     D   T      K   + P
Sbjct: 661 QQGNLEAAIAYYQKAVALKPHLEVLHFNIANSFLQQNK---YDEAITNYQNTLKIKPDWP 717

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDALG 431
            EV  N+G     +G  E A  S++ ALG
Sbjct: 718 -EVHANLGNCFSMQGRLEEALASYQQALG 745



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 3/119 (2%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  +  +  LA  Y  +G++EKA      ++K   KP+ F   Y  +G           A
Sbjct: 246 PEDAEVHKKLAEVYALQGEFEKAIASCNLAIK--FKPN-FAAAYLTMGNALHSQNKLEMA 302

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           +  + + LEI P+  E    LG +Y +LG++E+A    +KA  I+P+ +   + LG +L
Sbjct: 303 IQAYLQALEIQPEFAEASANLGSMYYKLGELEQAANYYQKALAINPQLSSVNLMLGSVL 361


>gi|452211222|ref|YP_007491336.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
 gi|452101124|gb|AGF98064.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
          Length = 1085

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 153/386 (39%), Gaps = 60/386 (15%)

Query: 50  YLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIV 109
           + GK  T    K E +  A   Y+ A  I+      W  KG  L   G+ E+A   ++  
Sbjct: 601 WYGKAST--YSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKA 658

Query: 110 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
           L+ D  +  A  G A    + GR  +++ +Y + L+++ +   A++ G  L    LG+  
Sbjct: 659 LDIDPQSSNAWYGMASTSSDLGRAEEAIAYYDQLLKLNSTDSEALQ-GKSLALASLGRYD 717

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
           +A   F   L+L+PENVEAL   A         A  R G  + + A E Y          
Sbjct: 718 EAVACFNPLLELEPENVEALEGRAF--------ALARSG--RPEAALEDYD--------- 758

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
                                 +    PT S +    A      G Y++A L Y   + E
Sbjct: 759 ---------------------VIMKLDPTNSKALAEKASLLEELGRYDEAALTY-GEILE 796

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
           I   +  I   Y  G+    +GDF +A+  ++K+L + P N + +   G     L ++EK
Sbjct: 797 ITPENREIM--YRQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKG---FALSKMEK 851

Query: 350 AQELLR---KAAKIDPRDAQA--FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 404
            QE L    KA + DP +  A  F       ISS+  AAL+ F     L         I 
Sbjct: 852 YQEALATYDKALEYDPDNPAAWYFKGCANFAISSNN-AALECFNKTVQLKPDC-----IT 905

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDAL 430
              N G +    G+   +  S++ AL
Sbjct: 906 AWYNKGYLANVLGDVNESINSYESAL 931



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 128/338 (37%), Gaps = 63/338 (18%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+KA ++D      W  KG      G+ + A  ++   ++ D +   A  G+A   
Sbjct: 410 AVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFAL 469

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GRY DS+  Y R L+V P     I    GL   +LG+  +A   + +ALQ++     
Sbjct: 470 ARIGRYEDSIVCYDRVLEVAPDS-AEIWYNKGLLLDELGRYQEASDCYSQALQINS---- 524

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                                                  NY    F        +E L+ 
Sbjct: 525 ---------------------------------------NYSVARFRLNKD---IEMLSG 542

Query: 248 TALAV------TNHGPTKSHS----YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
            + ++      TN  P K+ +     Y L+  Y S  D  +       S+K+++    + 
Sbjct: 543 NSTSISANNKNTNINPQKAITGGFWSYLLSYKYASPDDNTEIS----GSIKDLSPEFGYD 598

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             +YG      KL  +  AL +++  L I P   E     G    +LG+ E+A E  +KA
Sbjct: 599 EAWYGKASTYSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKA 658

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
             IDP+ + A+  +     SSD G A +A      LLK
Sbjct: 659 LDIDPQSSNAWYGMAS--TSSDLGRAEEAIAYYDQLLK 694



 Score = 39.7 bits (91), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 24/231 (10%)

Query: 171 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK---GMEKMQRAFEIYPYCAMALN 227
           A  A    L   P +VE L+       + N+   +++    +E  ++A EI P  +M+  
Sbjct: 3   AASARDEVLSQRPSSVEGLLT------KGNDLYSLKEYELSIECFEKALEIEPNSSMS-- 54

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYY 283
                ++  G      +  E ++A  +      P  S S+Y     Y    +Y +A   Y
Sbjct: 55  -----WYGKGCSLSALERYEESIACYDMAIETFPVSSESWYKKGDEYIQTKNYIEAINCY 109

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             S+   N      F          KLG  + ALT+++  ++   ++ + L+  G  Y Q
Sbjct: 110 EKSLATDNYLSRVWFQ---KATASEKLGLDQEALTSYDTSIQFGANSSKALQMQGKAYAQ 166

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTL 393
           L   E+A     +A  + P D + +   G +  +S D  +A++ +  A +L
Sbjct: 167 LENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISL 217


>gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101]
 gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 3145

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 148/332 (44%), Gaps = 18/332 (5%)

Query: 101  QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
            +A    +++LE    +   L   A +E   GR   +++   + + ++P    A      L
Sbjct: 1011 EAERICRLILEEKPQDFQVLHLLAVLENLAGRNDIAIQLLNQVINLYPGFTEAYSNLAKL 1070

Query: 161  CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
             + K G+L +A   +Q+A+ L+P N      L  + L   E   I   +   +++ EI P
Sbjct: 1071 MK-KEGRLEEAIAHYQKAISLEPNNSSNYSNLGFIFL---EKGQIESAIINSEKSIEINP 1126

Query: 221  YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 280
              +   N+  N  F   +   + + +       N  P  + ++ NL   +  KG+  KA 
Sbjct: 1127 NNSQG-NF--NLGFAWAEKGDLSKASTYYQKAINLQPDYAQAHNNLGLIFQEKGNLSKAS 1183

Query: 281  LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
             YY  ++ EIN    +   +  LG + LK G    A+  F K LE+ PD  +    LG +
Sbjct: 1184 NYYQQAL-EINP--NYAEAWCNLGVILLKQGQIELAIEYFRKSLELNPDYAQAYNNLGFV 1240

Query: 341  YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 400
            + + G + KA    ++A +I+P  A+A+ +LG +L            + A    +K+ E 
Sbjct: 1241 FQEKGNLSKASNYYQQALEINPNYAEAWCNLGVVLRKQ------GQIELAIEYFRKSLEL 1294

Query: 401  VPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
             P   +  N++GV   E+G F ++  S++ AL
Sbjct: 1295 NPDYAMTHNSLGVTFEEEGNFTASIASYQKAL 1326



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 14/282 (4%)

Query: 48   YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
            Y+ L K+  K+   EE    A  +Y KA  ++ +  S +   G + L KG++E A    +
Sbjct: 1064 YSNLAKLMKKEGRLEE----AIAHYQKAISLEPNNSSNYSNLGFIFLEKGQIESAIINSE 1119

Query: 108  IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
              +E + +N             +G  S +  +Y++A+ + P    A    +GL   + G 
Sbjct: 1120 KSIEINPNNSQGNFNLGFAWAEKGDLSKASTYYQKAINLQPDYAQA-HNNLGLIFQEKGN 1178

Query: 168  LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
            L KA   +Q+AL+++P   EA   L V+ L+  +   I   +E  +++ E+ P  A A N
Sbjct: 1179 LSKASNYYQQALEINPNYAEAWCNLGVILLKQGQ---IELAIEYFRKSLELNPDYAQAYN 1235

Query: 228  YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
             L   F   G         + AL +    P  + ++ NL      +G  E A  Y+  S+
Sbjct: 1236 NLGFVFQEKGNLSKASNYYQQALEI---NPNYAEAWCNLGVVLRKQGQIELAIEYFRKSL 1292

Query: 288  KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
             E+N   ++   +  LG    + G+F +++ +++K LE+ P+
Sbjct: 1293 -ELNP--DYAMTHNSLGVTFEEEGNFTASIASYQKALELEPN 1331



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 21/195 (10%)

Query: 171  ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
            A Q   + + L+P   +A   LA +     +   + + +   Q+A E+ P  +   + L 
Sbjct: 1697 AIQLLNQVINLNPGFTKAYSNLAKL---MKKEGRLEEAIAHYQKAIELEPNNSSNYSSLG 1753

Query: 231  NHFFFTGQHFLVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
              F   GQ           LA+ N+       P  S    NL   +   G+  KA  YY 
Sbjct: 1754 WIFLQKGQ---------IDLAIINYKKSRKINPNSSWININLGFVWEKNGNLPKANTYYQ 1804

Query: 285  ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
             ++ EI+  H     +  LG +  K G F  A+   +K LE+ PD  E   +LG+I+ QL
Sbjct: 1805 KAI-EIHPNHAE--AWCRLGNILQKQGQFELAIEYCQKSLELNPDYIEANHSLGYIFFQL 1861

Query: 345  GQIEKAQELLRKAAK 359
            G++ ++Q+   +A K
Sbjct: 1862 GKLAESQKYYEQAIK 1876



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
            IN    F   Y  L ++  K G    A+ +++K +E+ P+N     +LG I++Q GQI+ 
Sbjct: 1705 INLNPGFTKAYSNLAKLMKKEGRLEEAIAHYQKAIELEPNNSSNYSSLGWIFLQKGQIDL 1764

Query: 350  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLN 407
            A    +K+ KI+P  +   I+LG   +    G        A T  +KA E  P   E   
Sbjct: 1765 AIINYKKSRKINPNSSWININLG--FVWEKNG----NLPKANTYYQKAIEIHPNHAEAWC 1818

Query: 408  NIGVIHFEKGEFESAHQSFKDAL 430
             +G I  ++G+FE A +  + +L
Sbjct: 1819 RLGNILQKQGQFELAIEYCQKSL 1841



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 10/125 (8%)

Query: 257  PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
            P  S +Y +L   +  KG  + A + Y  S ++IN    +I     LG V  K G+   A
Sbjct: 1743 PNNSSNYSSLGWIFLQKGQIDLAIINYKKS-RKINPNSSWI--NINLGFVWEKNGNLPKA 1799

Query: 317  LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA-------FI 369
             T ++K +EI+P++ E    LG+I  + GQ E A E  +K+ +++P   +A       F 
Sbjct: 1800 NTYYQKAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLELNPDYIEANHSLGYIFF 1859

Query: 370  DLGEL 374
             LG+L
Sbjct: 1860 QLGKL 1864



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 38/256 (14%)

Query: 67   LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
            +A Q  N+   ++      +    +L+  +G +E+A + ++  +E + +N         +
Sbjct: 1696 IAIQLLNQVINLNPGFTKAYSNLAKLMKKEGRLEEAIAHYQKAIELEPNNSSNYSSLGWI 1755

Query: 127  EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
               +G+   ++  YK++ +++P+    I + +G    K G L KA   +Q+A+++ P + 
Sbjct: 1756 FLQKGQIDLAIINYKKSRKINPNS-SWININLGFVWEKNGNLPKANTYYQKAIEIHPNHA 1814

Query: 187  EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL-ANHFFFTGQHFLVEQL 245
            EA   L  + LQ  +       +E  Q++ E+ P      +Y+ ANH             
Sbjct: 1815 EAWCRLGNI-LQ--KQGQFELAIEYCQKSLELNP------DYIEANH------------- 1852

Query: 246  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
                        +  + ++ L +   S+  YE+A   Y     E+N  H  +  ++GL  
Sbjct: 1853 ------------SLGYIFFQLGKLAESQKYYEQAIKKYYEQAIELNTNH--VNAHFGLAN 1898

Query: 306  VQLKLGDFRSALTNFE 321
              LK G+F    + +E
Sbjct: 1899 ALLKQGNFIPGFSKYE 1914



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           ++ LG +    G F +A+ +++K LEI P+N E   +LG I ++LG++ ++Q+  ++A K
Sbjct: 115 WHNLGLILRDKGQFEAAIEHYQKSLEIKPNNAEVYHSLGTISLELGKLSESQKYYQEALK 174

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAF 387
           +D     A   L  +L+    G+ +  F
Sbjct: 175 LDKNYLNAHFGLAAVLLKQ--GSLMQGF 200



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           LL  A  ++    + ++ E     +Q  P+C  A  + + LC  K  ++  A   +Q+A+
Sbjct: 511 LLTIALEKYQVENWKEAEEICHFIIQKQPNCTSAFEI-LALCAKKTDKIDLAIVYYQKAI 569

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            L+P N +  + LA++     +   + + +   QRA E+ P  A   + L   F   G  
Sbjct: 570 NLNPNNYKTHLGLAIV---LKKQQKLDEAIVHNQRAIELKPNEASGWHNLGVIFKIQGNI 626

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
                  + +L +    P  ++ YY+ A     +G+  +A + Y   + E+N  H  I  
Sbjct: 627 PEAICCYQKSLEIQ---PNNTYIYYSWANILKQQGNLTEAKVLYEKCI-ELNPNH--INA 680

Query: 300 YYGLGQVQLKLGDFRSALTNFE 321
           ++  G + LK GD     + +E
Sbjct: 681 HFARGFIILKQGDLLVGFSEYE 702



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 7/170 (4%)

Query: 48   YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
            Y+ L K+  K+   EE    A  +Y KA  ++ +  S +   G + L KG+++ A   +K
Sbjct: 1715 YSNLAKLMKKEGRLEE----AIAHYQKAIELEPNNSSNYSSLGWIFLQKGQIDLAIINYK 1770

Query: 108  IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLG 166
               + + ++    +    V    G    +  +Y++A+++HP+   A  RLG  L   K G
Sbjct: 1771 KSRKINPNSSWININLGFVWEKNGNLPKANTYYQKAIEIHPNHAEAWCRLGNIL--QKQG 1828

Query: 167  QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            Q   A +  Q++L+L+P+ +EA  +L  +  Q  + A  +K  E+  + +
Sbjct: 1829 QFELAIEYCQKSLELNPDYIEANHSLGYIFFQLGKLAESQKYYEQAIKKY 1878



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 89/409 (21%), Positives = 159/409 (38%), Gaps = 46/409 (11%)

Query: 299  PYYGLGQV--QLKLGDFRSALTNFEKVLEIYPDNCETLKAL------GHIYVQLGQIEKA 350
            P+Y   ++  Q K+GD+ S L   ++ L  + ++ + L  L       + Y Q   + +A
Sbjct: 953  PWYPTMRLFRQPKIGDWNSVLIEVKEALMEFIESQKNLPDLPANFENAYQYYQQNNLVEA 1012

Query: 351  QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNN 408
            + + R   +  P+D Q       LL   +  A  +    A  LL +     P   E  +N
Sbjct: 1013 ERICRLILEEKPQDFQVL----HLLAVLENLAGRN--DIAIQLLNQVINLYPGFTEAYSN 1066

Query: 409  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
            +  +  ++G  E A   ++ A+      +L  + +  Y   ++   +  +  Q+     N
Sbjct: 1067 LAKLMKKEGRLEEAIAHYQKAI------SLEPNNSSNY---SNLGFIFLEKGQIESAIIN 1117

Query: 469  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
                +E+  N     FNL     +  D   AS  Y+  +    DY  A+  L  I + + 
Sbjct: 1118 SEKSIEINPNNSQGNFNLGFAWAEKGDLSKASTYYQKAINLQPDYAQAHNNLGLIFQEKG 1177

Query: 529  NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT-DGKDSYATL 587
            NL  +     +AL++N  Y  A   LG + LK      A E FR + +   D   +Y  L
Sbjct: 1178 NLSKASNYYQQALEINPNYAEAWCNLGVILLKQGQIELAIEYFRKSLELNPDYAQAYNNL 1237

Query: 588  SLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 647
                   F            E  +L KA   Y + +  + +   A    GVVL ++GQ +
Sbjct: 1238 GF----VFQ-----------EKGNLSKASNYYQQALEINPNYAEAWCNLGVVLRKQGQIE 1282

Query: 648  VSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
            ++ + F +  E               +L   +  +GNF  ++  YQ  L
Sbjct: 1283 LAIEYFRKSLELNPDYAMTHN-----SLGVTFEEEGNFTASIASYQKAL 1326


>gi|72382931|ref|YP_292286.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002781|gb|AAZ58583.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 681

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 157/334 (47%), Gaps = 18/334 (5%)

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
           ++G + +A+  +K  +     +  A      +  + G+  ++    ++A+++ P    A 
Sbjct: 70  SQGNIPEAAKYYKNFINKGFKDERAFSNYGVILKSLGKLKEAEISTRKAIEIKPDFAKA- 128

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
              +G     LG+L +A  + ++A+++ P+  +A   L  +    N+   +++     ++
Sbjct: 129 HYNLGNILNDLGKLKEAEISTRKAIEIKPDYADAYSNLGNI---LNDLGKLQEAELSYRK 185

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           A EI P  A A   L N     G+    E     A+ +    P  + ++YNL    +  G
Sbjct: 186 AIEIKPDYAEAHYNLGNLLKELGKLQEAELSYRKAIEIK---PDFAEAHYNLGNILNDLG 242

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
             ++A L Y  ++ EI KP +F   +Y LG +   LG  + A  ++ K +EI PD  E  
Sbjct: 243 KLQEAELSYRKAI-EI-KP-DFAEAHYNLGNILNDLGKLQEAELSYRKAIEIKPDFAEAH 299

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             LG++  +LG++++A+   RKA +I P  A+A  +LG LL        L   + A    
Sbjct: 300 YNLGNLLKELGKLQEAELSYRKAIEIKPDFAEAHYNLGNLL------KELGKLQEAELSY 353

Query: 395 KKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 426
           +KA E  P   E   N+ ++   +G++++  +++
Sbjct: 354 RKAIEIKPDYAEAFWNLSLLELLQGDYKNGLENY 387



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 150/368 (40%), Gaps = 53/368 (14%)

Query: 240 FLVEQLTETALAVTNHG--PTKSHSYYNLARSYHSKGDYEKAGLYY-------------- 283
           F +E+  E     TN    P+K     N A  +HS+G+  +A  YY              
Sbjct: 37  FTLEEKKENITINTNTPSQPSKEQ-IINQAIEFHSQGNIPEAAKYYKNFINKGFKDERAF 95

Query: 284 -----------------MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
                            +++ K I    +F   +Y LG +   LG  + A  +  K +EI
Sbjct: 96  SNYGVILKSLGKLKEAEISTRKAIEIKPDFAKAHYNLGNILNDLGKLKEAEISTRKAIEI 155

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 386
            PD  +    LG+I   LG++++A+   RKA +I P  A+A  +LG LL        L  
Sbjct: 156 KPDYADAYSNLGNILNDLGKLQEAELSYRKAIEIKPDYAEAHYNLGNLL------KELGK 209

Query: 387 FKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTK 444
            + A    +KA E  P   E   N+G I  + G+ + A  S++ A+         D    
Sbjct: 210 LQEAELSYRKAIEIKPDFAEAHYNLGNILNDLGKLQEAELSYRKAIE-----IKPDFAEA 264

Query: 445 TYVIDASASML-QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 503
            Y +    + L + ++ +L +R       +E+  +     +NL  LL+++     A + Y
Sbjct: 265 HYNLGNILNDLGKLQEAELSYR-----KAIEIKPDFAEAHYNLGNLLKELGKLQEAELSY 319

Query: 504 RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD 563
           R  +    D+ +A+  L  + K    LQ +     +A+++   Y  A   L  LEL   D
Sbjct: 320 RKAIEIKPDFAEAHYNLGNLLKELGKLQEAELSYRKAIEIKPDYAEAFWNLSLLELLQGD 379

Query: 564 WVKAKETF 571
           +    E +
Sbjct: 380 YKNGLENY 387


>gi|124021994|ref|YP_001016301.1| hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962280|gb|ABM77036.1| Hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT
           9303]
          Length = 837

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 141/316 (44%), Gaps = 15/316 (4%)

Query: 84  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           S +   G +   +G+ +++   ++  L  +  +  A    + +      ++ +L+   +A
Sbjct: 57  SLYTNLGVIYKNEGDFKESGRCYRSALRINPFSCDAYTNLSSLAIAENEFTSALDLANKA 116

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 203
           ++++P+C  A  L  G    +LG L +A  +  ++L+L P+N  A + L  +     E  
Sbjct: 117 IKLNPNCDVA-NLNAGKALLELGDLEQALASTLKSLELQPDNHTAHMNLGSIYQDLGE-- 173

Query: 204 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
            + + +    +  E+ P    AL  L   +   GQ   ++Q   + L      P    ++
Sbjct: 174 -LDQALASTIKYLELKPDNPDALMNLGGIYKDLGQ---LDQALASTLKNLEIKPDNPTAH 229

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            NL   Y   G+ ++A     +++K +    +    +  LG +   LG+   ALT+  K 
Sbjct: 230 MNLGVIYKDLGNLDQA---LTSTLKSLELQPDNHTAHMNLGSIYQDLGNLDQALTSTLKS 286

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG-- 381
           LE+  DN + L  LG IY  LG +++A     K+ ++ P +  A  +LG   I  + G  
Sbjct: 287 LELKRDNPDALTNLGGIYKDLGNLDQALTSTLKSLELKPNNPDALTNLGG--IYKEQGQL 344

Query: 382 -AALDAFKTARTLLKK 396
             AL A+K A TL  K
Sbjct: 345 DQALTAYKKASTLAPK 360



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 44/303 (14%)

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           E  F  A    NKA +++ +     +  G+ LL  G++EQA ++    LE   DN  A +
Sbjct: 103 ENEFTSALDLANKAIKLNPNCDVANLNAGKALLELGDLEQALASTLKSLELQPDNHTAHM 162

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
               +  + G    +L    + L++ P  P A+ + +G     LGQL +A  +  + L++
Sbjct: 163 NLGSIYQDLGELDQALASTIKYLELKPDNPDAL-MNLGGIYKDLGQLDQALASTLKNLEI 221

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
            P+N  A + L V          I K +  + +A                         L
Sbjct: 222 KPDNPTAHMNLGV----------IYKDLGNLDQA-------------------------L 246

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
              L    L   NH      ++ NL   Y   G+ ++A     +++K +    +      
Sbjct: 247 TSTLKSLELQPDNH-----TAHMNLGSIYQDLGNLDQA---LTSTLKSLELKRDNPDALT 298

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            LG +   LG+   ALT+  K LE+ P+N + L  LG IY + GQ+++A    +KA+ + 
Sbjct: 299 NLGGIYKDLGNLDQALTSTLKSLELKPNNPDALTNLGGIYKEQGQLDQALTAYKKASTLA 358

Query: 362 PRD 364
           P++
Sbjct: 359 PKE 361



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 144/343 (41%), Gaps = 42/343 (12%)

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           Y+N A   H++GD ++A L Y+ S+    +       Y  LG +    GDF+ +   +  
Sbjct: 25  YFNKAVKSHAQGDIQQAKLLYLKSIANGLENESL---YTNLGVIYKNEGDFKESGRCYRS 81

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTG 381
            L I P +C+    L  + +   +   A +L  KA K++P    A ++ G+ L+   D  
Sbjct: 82  ALRINPFSCDAYTNLSSLAIAENEFTSALDLANKAIKLNPNCDVANLNAGKALLELGDLE 141

Query: 382 AALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSF----------KDA 429
            AL     A TL  K+ E  P       N+G I+ + GE + A  S            DA
Sbjct: 142 QAL-----ASTL--KSLELQPDNHTAHMNLGSIYQDLGELDQALASTIKYLELKPDNPDA 194

Query: 430 LGD--GIWLTL------LDSKTKTYVI---DASASM---LQFKDM-QLFHRFENDGNHVE 474
           L +  GI+  L      L S  K   I   + +A M   + +KD+  L     +    +E
Sbjct: 195 LMNLGGIYKDLGQLDQALASTLKNLEIKPDNPTAHMNLGVIYKDLGNLDQALTSTLKSLE 254

Query: 475 LPWNKVTVLFNLARLLEQIH--DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 532
           L  +  T   NL  + + +   D    S L  L L +  D  DA   L  I K   NL  
Sbjct: 255 LQPDNHTAHMNLGSIYQDLGNLDQALTSTLKSLELKR--DNPDALTNLGGIYKDLGNLDQ 312

Query: 533 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS 575
           ++    ++L++    P+AL+ LG +  +     +A   ++ AS
Sbjct: 313 ALTSTLKSLELKPNNPDALTNLGGIYKEQGQLDQALTAYKKAS 355


>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
 gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 1121

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 171/419 (40%), Gaps = 36/419 (8%)

Query: 50   YLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIV 109
            + GK  T    K E +  A   Y+ A  I+      W  KG  L   G  E+A   +K  
Sbjct: 645  WYGKASTYS--KLEMYEDALYAYDTALSINPLRTEAWYEKGSALDKLGRSEEALECYKKA 702

Query: 110  LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
            L+ D  +  A  G A      GR  +++ +Y + L  + S P A++ G       LG+  
Sbjct: 703  LDLDPQSSNAWYGMASTSNTLGRSEEAVAYYDQLLAANASDPEALQ-GKSEALINLGRYE 761

Query: 170  KARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
            +A   F   L+L+PEN+EAL   ALA+   +  E A     +E   R  ++ P    AL 
Sbjct: 762  EAIACFNPLLELEPENIEALDGRALALARSERREEA-----LEDYNRILQLDPSNTKALA 816

Query: 228  YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY---- 283
              A+ F   G++   E+   T   +    P      Y   ++  +KGD+E A   Y    
Sbjct: 817  EKASLFEELGRY---EEAASTYGEILLITPENREIMYRQGKALEAKGDFEAAIACYDQIL 873

Query: 284  MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
                K I+  +   F Y        K+  ++ A+ +++K +E  P+N       G     
Sbjct: 874  TLDPKNIDAINNKGFAY-------AKMERYQEAIASYDKAIEYAPNNAAAWYFKGCANFA 926

Query: 344  LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVP 402
            +     A E   K  ++ P    A+ + G L  +  +   +++++  A  +        P
Sbjct: 927  ISSNIAAVECFDKVVQLKPDCITAWYNKGYLYNVMGEVNESINSYDGALAI-------NP 979

Query: 403  IE--VLNNIGVIHFEKGEFE--SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
             E  +L N    H+   E+E  SA ++  DA+  G    L D  T+ ++ +   S L +
Sbjct: 980  NEPSILYNKRFAHYRIKEYEDASACKTKLDAIDPGFVAALQDRGTRIFIPETYRSDLDY 1038



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 133/330 (40%), Gaps = 41/330 (12%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
           + KG  L +  E E +   F   LE D ++  A  G+ C   +  RY ++++ Y RAL+ 
Sbjct: 67  LNKGNNLYSLKEYELSIECFDDALEMDSNSSMAWYGKGCALTSLERYEEAIDCYDRALES 126

Query: 147 HPSCPGA-IRLGIGL-----------CRYKLGQLGK--ARQAFQRALQLDPENVEALVAL 192
            P+   +  + G G            C  K        +R  FQ+AL  +   +E   AL
Sbjct: 127 FPASSWSWYQKGNGYLQTQNYVEAISCYEKSLATDSYLSRVWFQKALASEKLGLEQ-EAL 185

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
           A  D   +  + + K ++   +A+          NY      F G           AL +
Sbjct: 186 ASYDSSIDLGSNVSKTLQMQGKAY------TGLENYDEAMKCFDG-----------ALNI 228

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
           T   P  S  +      Y   GDYE A   Y  ++  +N   +    +Y  G     +  
Sbjct: 229 T---PDDSELWTQKGIMYDMSGDYEAAIQCYDEAIS-LNP--DLTEAWYNKGVDLEGMEM 282

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           ++ ALT +E VL   P+N   L+  G    QLG+ E+A +   +    +P +A A+   G
Sbjct: 283 YQDALTCYEFVLLSEPENLSALQKKGFCLEQLGRNEEALQCYEEILIYNPDNADAWYSKG 342

Query: 373 ELLIS-SDTGAALDAFKTARTLLKKAGEEV 401
            +L +  D  AA+  +   R L   AG EV
Sbjct: 343 SVLNAMGDYDAAIACYD--RALNPDAGIEV 370



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 133/323 (41%), Gaps = 33/323 (10%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA-CV 126
           A Q Y++A  ++      W  KG  L      + A + ++ VL ++ +N+ AL  +  C+
Sbjct: 252 AIQCYDEAISLNPDLTEAWYNKGVDLEGMEMYQDALTCYEFVLLSEPENLSALQKKGFCL 311

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP--- 183
           E   GR  ++L+ Y+  L  +P    A     G     +G    A   + RAL  D    
Sbjct: 312 E-QLGRNEEALQCYEEILIYNPDNADAW-YSKGSVLNAMGDYDAAIACYDRALNPDAGIE 369

Query: 184 --ENVEALV--------ALAVM-DLQANEAAGIR----KGM-----EKMQRAFEIYPYCA 223
             E  +AL+        +L +  ++   +++ ++    KG+     E  + A E Y    
Sbjct: 370 VEEVGDALLEEFNAYDSSLPIYSEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVL 429

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG-DYEKAGLY 282
              +  A  ++  GQ        E A    +        Y   A+ +H KG D  K G Y
Sbjct: 430 ETESGHAMVWYRKGQDLDRLNRYEEAADCYDKALKLDSGY---AKVWHRKGYDSSKLGQY 486

Query: 283 YMASV---KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
             A+    K +N    +   +YG      K GD+  AL  +EKVL   PD+ E     G 
Sbjct: 487 KDAAKSFDKAVNLDENYTLAWYGKAFALSKTGDYEEALACYEKVLAAAPDSAEIWYNKGL 546

Query: 340 IYVQLGQIEKAQELLRKAAKIDP 362
           +  QL + ++A +   +A +I+P
Sbjct: 547 LLDQLERYQEASDCYSQALQINP 569



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 128/315 (40%), Gaps = 21/315 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+KA ++D      W  KG      G+ + A+ +F   +  D +   A  G+A   
Sbjct: 455 AADCYDKALKLDSGYAKVWHRKGYDSSKLGQYKDAAKSFDKAVNLDENYTLAWYGKAFAL 514

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G Y ++L  Y++ L   P     I    GL   +L +  +A   + +ALQ++P    
Sbjct: 515 SKTGDYEEALACYEKVLAAAPD-SAEIWYNKGLLLDQLERYQEASDCYSQALQINPGYSI 573

Query: 188 ALVALAV-MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
           A   L   M+L  +      +G +      E+ P  A++  + +  +    ++   E+ +
Sbjct: 574 ARFRLNKDMELYGDSTPNSSEGKDP-----EVSPKKAISGGFWS--YLLGYKYASSEENS 626

Query: 247 ETALAVTNHGPTKSH--SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
           + +    +  P  S+  ++Y  A +Y     YE A LY   +   IN        +Y  G
Sbjct: 627 DLSENFDDLSPEFSYDSAWYGKASTYSKLEMYEDA-LYAYDTALSINPLR--TEAWYEKG 683

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA---QELLRKAAKID 361
               KLG    AL  ++K L++ P +      +      LG+ E+A    + L  A   D
Sbjct: 684 SALDKLGRSEEALECYKKALDLDPQSSNAWYGMASTSNTLGRSEEAVAYYDQLLAANASD 743

Query: 362 PRDAQ----AFIDLG 372
           P   Q    A I+LG
Sbjct: 744 PEALQGKSEALINLG 758


>gi|339501296|ref|YP_004699331.1| hypothetical protein Spica_2727 [Spirochaeta caldaria DSM 7334]
 gi|338835645|gb|AEJ20823.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           caldaria DSM 7334]
          Length = 1004

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 42/334 (12%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG +  + +E E+ F +    + K   +D + P      G  L +KG+ ++A   ++
Sbjct: 145 YNNLGTMYDRLQESEKAFAI----FQKGLSLDRNNPVLHFNYGLALESKGKFDEAVREYE 200

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             L +    V AL     +   +GR+SD+LE + R L + P    A R  IG+     G+
Sbjct: 201 AALRSRPGWVEALNNLGILRLKQGRHSDALEIFNRILSIDPFNAEA-RNNIGVVFADQGK 259

Query: 168 LGKARQAFQRALQLDPENVEALVAL------------AVMDLQ-----ANEAAGIR---- 206
              A   +++A+++DP+ V+A+V L            A+++L+        +  +R    
Sbjct: 260 FNDAITNYRQAIEVDPKYVKAVVNLEHALESIGHQGDALIELEKLVKLVPNSTEVRINLG 319

Query: 207 ----------KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
                     + +E+  RA E  P    AL      +   G+    +   E  LA+    
Sbjct: 320 ALYLKLQRYPEALEQATRALEWDPDNLQALRIQGAAYRAIGKDAEAQACFERILAIE--- 376

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P     Y +LA  +  + +Y +A    +A ++   KP +       LG++ ++ G+   A
Sbjct: 377 PGNYSFYLDLADLHFQRKEYREAEERILAFLR--RKPQDRNAKMM-LGRLYVETGNKAHA 433

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
           +T FE++++  P + E L AL  I+ + G +EKA
Sbjct: 434 ITIFEELIKDNPQDVEALAALAEIHKKTGDMEKA 467



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 144/338 (42%), Gaps = 22/338 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+  +A    K  L  ++++  ALL         G+Y ++L+ +   L  +P    A+  
Sbjct: 20  GDHAEAERLLKYYLSKNKNDREALLLLGSTYAKSGKYDEALDVFHSLLGSNPDDLEALN- 78

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            I +   K   L KA  A +RA++LDP   E    L  +  Q +          K+    
Sbjct: 79  NIAVIYRKKEDLNKALDALERAIELDPTRPELYYNLGNVYKQLSNYKAASMAYAKV---I 135

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS----YYNLARSYHS 272
           E+ P    A N L       G  +   Q +E A A+   G +   +    ++N   +  S
Sbjct: 136 ELDPRYVPAYNNL-------GTMYDRLQESEKAFAIFQKGLSLDRNNPVLHFNYGLALES 188

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           KG +++A   Y A+++  ++P  ++     LG ++LK G    AL  F ++L I P N E
Sbjct: 189 KGKFDEAVREYEAALR--SRPG-WVEALNNLGILRLKQGRHSDALEIFNRILSIDPFNAE 245

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
               +G ++   G+   A    R+A ++DP+  +A ++L   L S   G   DA      
Sbjct: 246 ARNNIGVVFADQGKFNDAITNYRQAIEVDPKYVKAVVNLEHALES--IGHQGDALIELEK 303

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           L+K        EV  N+G ++ +   +  A +    AL
Sbjct: 304 LVKLVPNST--EVRINLGALYLKLQRYPEALEQATRAL 339



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 23/343 (6%)

Query: 43  ALGVYYTYLGK----------IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 92
           AL V+++ LG           I    R+KE+    A     +A  +D   P  +   G +
Sbjct: 59  ALDVFHSLLGSNPDDLEALNNIAVIYRKKED-LNKALDALERAIELDPTRPELYYNLGNV 117

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD-SLEFYKRALQVHPSCP 151
                  + AS A+  V+E D   VPA      + ++R + S+ +   +++ L +  + P
Sbjct: 118 YKQLSNYKAASMAYAKVIELDPRYVPAYNNLGTM-YDRLQESEKAFAIFQKGLSLDRNNP 176

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
             +    GL     G+  +A + ++ AL+  P  VEAL  L ++ L+    +     +E 
Sbjct: 177 -VLHFNYGLALESKGKFDEAVREYEAALRSRPGWVEALNNLGILRLKQGRHS---DALEI 232

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
             R   I P+ A A N +     F  Q    + +T    A+    P    +  NL  +  
Sbjct: 233 FNRILSIDPFNAEARNNIG--VVFADQGKFNDAITNYRQAI-EVDPKYVKAVVNLEHALE 289

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
           S G    A +     VK +    E       LG + LKL  +  AL    + LE  PDN 
Sbjct: 290 SIGHQGDALIELEKLVKLVPNSTEVRI---NLGALYLKLQRYPEALEQATRALEWDPDNL 346

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           + L+  G  Y  +G+  +AQ    +   I+P +   ++DL +L
Sbjct: 347 QALRIQGAAYRAIGKDAEAQACFERILAIEPGNYSFYLDLADL 389



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 141/359 (39%), Gaps = 22/359 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A+  Y K   +D      +   G +     E E+A + F+  L  DR+N           
Sbjct: 127 ASMAYAKVIELDPRYVPAYNNLGTMYDRLQESEKAFAIFQKGLSLDRNNPVLHFNYGLAL 186

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            ++G++ +++  Y+ AL+  P    A+   +G+ R K G+   A + F R L +DP N E
Sbjct: 187 ESKGKFDEAVREYEAALRSRPGWVEALN-NLGILRLKQGRHSDALEIFNRILSIDPFNAE 245

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH----FLVE 243
           A   + V+     +       +   ++A E+ P    A+  L +     G        +E
Sbjct: 246 ARNNIGVV---FADQGKFNDAITNYRQAIEVDPKYVKAVVNLEHALESIGHQGDALIELE 302

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           +L +         P  +    NL   Y     Y +A      + + +    + +      
Sbjct: 303 KLVKLV-------PNSTEVRINLGALYLKLQRYPEA---LEQATRALEWDPDNLQALRIQ 352

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G     +G    A   FE++L I P N      L  ++ Q  +  +A+E +    +  P+
Sbjct: 353 GAAYRAIGKDAEAQACFERILAIEPGNYSFYLDLADLHFQRKEYREAEERILAFLRRKPQ 412

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
           D  A + LG L +  +TG    A      L+K   ++V  E L  +  IH + G+ E A
Sbjct: 413 DRNAKMMLGRLYV--ETGNKAHAITIFEELIKDNPQDV--EALAALAEIHKKTGDMEKA 467


>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
 gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
          Length = 609

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 140/334 (41%), Gaps = 38/334 (11%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           +KA  +D  + + W  KG+ L  KG   +A  AF   +  D +   A   +  V  ++G+
Sbjct: 251 DKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGK 310

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN------- 185
           Y ++++ Y  A+++HP+   A  +  G   Y+ G   +A QA+  A++LDP+N       
Sbjct: 311 YDEAIQAYDEAIRLHPNYVDAW-INKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNK 369

Query: 186 ----------VEALVAL-AVMDLQANEA-AGIRKG------------MEKMQRAFEIYPY 221
                      E ++A    + L   EA   + KG            ++    A  + P 
Sbjct: 370 GNALSELGNYTEGILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPE 429

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
            A       N F   G++    Q  + A+ +    P ++  + +   S+  +G Y++A  
Sbjct: 430 EADVWVSKGNSFRMQGKYDEAIQAYDEAIRLD---PEEADVWVSKGNSFRMQGKYDEA-- 484

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
              A  + I    EF   +Y  G    +   +  A+  +++ + + PD  E     G+  
Sbjct: 485 -IQAYDEAIRLDPEFAGAWYNKGNALYEQDKYDEAIQAYDEAIRLNPDYKEAWNNKGNAL 543

Query: 342 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           V  G+ ++A +   +A ++DP  A  +   G +L
Sbjct: 544 VMQGKYDEAIQAYDEAIRLDPEFAYPWFSKGVVL 577



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/309 (20%), Positives = 132/309 (42%), Gaps = 10/309 (3%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           ++  AT+ +++A R+D      W  KG+ L  +G    A  A+   +  D +   A   +
Sbjct: 106 NYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKK 165

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
               F RG Y+++++ +  A+++ P          G+     G   +A  A+  A++LDP
Sbjct: 166 GDALFERGNYTEAIQAFDEAIRLDPED-ATTWYNKGVALGMQGNYAEAIPAYDEAIRLDP 224

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           E+ +A           NE     + +  + +A E+ P  A   N      +  G +    
Sbjct: 225 EDADAWNNRGNA---LNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAI 281

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           Q  + A+ +    P  + ++ N       +G Y++A   Y  +++    P+ ++  +   
Sbjct: 282 QAFDEAIRLD---PELAVAWSNKGTVLADQGKYDEAIQAYDEAIRL--HPN-YVDAWINK 335

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G    + G++  A+  +++ + + PDN  T    G+   +LG   +      +A ++DP 
Sbjct: 336 GSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDEAIRLDPE 395

Query: 364 DAQAFIDLG 372
           +A  ++  G
Sbjct: 396 EADVWVSKG 404



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/371 (21%), Positives = 152/371 (40%), Gaps = 22/371 (5%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           ++ +A + +++A R+D      W  KG  L  +G   +A  A+   +  D +   A   +
Sbjct: 4   NYTMAIEAFDEAIRLDPEYADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWNNK 63

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
                 +G Y +S++ Y  A+++ P    A     G+     G   +A + F  A++LDP
Sbjct: 64  GLALDYQGNYDESIKAYDEAIRLDPEFAAAWN-NKGIALGNQGNYTEATRCFDEAIRLDP 122

Query: 184 ENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           E   A       +  + N    I         A  + P  A A +   +  F  G +   
Sbjct: 123 EYAGAWYNKGKALSERGNYTGAIL----AYDEAIRLDPELAAAWHKKGDALFERGNYTEA 178

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
            Q  + A+ +    P  + ++YN   +   +G+Y +A   Y  +++      E    +  
Sbjct: 179 IQAFDEAIRLD---PEDATTWYNKGVALGMQGNYAEAIPAYDEAIR---LDPEDADAWNN 232

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G    +LG +  A+   +K +E+ P++       G      G   +A +   +A ++DP
Sbjct: 233 RGNALNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRLDP 292

Query: 363 RDAQAFIDLGELLISSDTGA---ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
             A A+ + G +L  +D G    A+ A+  A  L         ++   N G   +E+G +
Sbjct: 293 ELAVAWSNKGTVL--ADQGKYDEAIQAYDEAIRLHPNY-----VDAWINKGSALYEQGNY 345

Query: 420 ESAHQSFKDAL 430
             A Q++ +A+
Sbjct: 346 PEAIQAYDEAI 356



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/401 (20%), Positives = 157/401 (39%), Gaps = 48/401 (11%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           ++  A Q Y++A R+D    S W  KG  L  +G  +++  A+   +  D +   A   +
Sbjct: 38  NYTEAVQAYDEAIRLDPEYASAWNNKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNK 97

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPG------------------------AIRLGI- 158
                N+G Y+++   +  A+++ P   G                        AIRL   
Sbjct: 98  GIALGNQGNYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPE 157

Query: 159 --------GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV-MDLQANEAAGIRKGM 209
                   G   ++ G   +A QAF  A++LDPE+        V + +Q N A  I    
Sbjct: 158 LAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVALGMQGNYAEAI---- 213

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
                A  + P  A A N   N     G++       + A+ +    P  +  + N  + 
Sbjct: 214 PAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELD---PEDAAPWNNKGKP 270

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
              KG+Y +A     A  + I    E    +   G V    G +  A+  +++ + ++P+
Sbjct: 271 LWMKGNYTEA---IQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPN 327

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
             +     G    + G   +A +   +A ++DP +A  + + G  L  S+ G   +    
Sbjct: 328 YVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNAL--SELGNYTEGILA 385

Query: 390 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               ++   EE  + V  + G     +G+++ A Q++ +A+
Sbjct: 386 YDEAIRLDPEEADVWV--SKGNSFRMQGKYDEAIQAYDEAI 424



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q Y++A R+D  E   WV KG     +G+ ++A  A+   +  D +     + +    
Sbjct: 416 AIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSF 475

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
             +G+Y ++++ Y  A+++ P   GA     G   Y+  +  +A QA+  A++L+P+  E
Sbjct: 476 RMQGKYDEAIQAYDEAIRLDPEFAGAW-YNKGNALYEQDKYDEAIQAYDEAIRLNPDYKE 534

Query: 188 AL 189
           A 
Sbjct: 535 AW 536



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 62/298 (20%), Positives = 110/298 (36%), Gaps = 45/298 (15%)

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G    A +AF  A++LDPE  +A  +     L         + ++    A  + P  A A
Sbjct: 3   GNYTMAIEAFDEAIRLDPEYADAWYSKG---LTLYYRGNYTEAVQAYDEAIRLDPEYASA 59

Query: 226 LNYLANHFFFTGQHF---------------LVEQLTETALAVTNHG-------------- 256
            N       + G +                         +A+ N G              
Sbjct: 60  WNNKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIR 119

Query: 257 --PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P  + ++YN  ++   +G+Y  A L Y  +++      E    ++  G    + G++ 
Sbjct: 120 LDPEYAGAWYNKGKALSERGNYTGAILAYDEAIR---LDPELAAAWHKKGDALFERGNYT 176

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+  F++ + + P++  T    G      G   +A     +A ++DP DA A+ + G  
Sbjct: 177 EAIQAFDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNA 236

Query: 375 LISSDTGAALDAFKTARTLLKKAGEEVPIEV--LNNIGVIHFEKGEFESAHQSFKDAL 430
           L        L  +  A   L KA E  P +    NN G   + KG +  A Q+F +A+
Sbjct: 237 LNE------LGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAI 288


>gi|427421749|ref|ZP_18911932.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
 gi|425757626|gb|EKU98480.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
          Length = 1303

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 140/332 (42%), Gaps = 19/332 (5%)

Query: 64   HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
            H+  A   Y+KA  +   + ++W  +G  L   G  E+A +++   +E + DN  A   +
Sbjct: 853  HYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNR 912

Query: 124  ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
                 + G Y +++  Y +A+++ P    A     G   + LG+  +A  ++ +A++L P
Sbjct: 913  GNSLASLGHYQEAIASYDKAVELKPDNHLAWN-NRGSSLHNLGRYQEAITSYNKAVELKP 971

Query: 184  ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
            +N    +A        +     ++ +    +A E+ P    A N   +     G++    
Sbjct: 972  DN---HLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRY---- 1024

Query: 244  QLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
               E A+A  +      P    ++ N   S  + G YE+A   Y  +V      H+ +  
Sbjct: 1025 ---EEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIKPDDHKALA- 1080

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
                G +  +LG  + AL +    +++ PD    +   G  Y QL Q E A E L +  +
Sbjct: 1081 --NRGDIHRRLGQHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQQYETALEDLDRTIE 1138

Query: 360  IDPRDAQAFIDLGEL-LISSDTGAALDAFKTA 390
            IDP D  A    GEL L      AAL AF  A
Sbjct: 1139 IDPDDTWAIGYRGELYLWLHRYQAALTAFNHA 1170



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 26/365 (7%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y+KA  ++ ++ + W  +G  L   G  E+A +++   +E + DN  A   +     N G
Sbjct: 759  YDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAWYSRGNSLANLG 818

Query: 132  RYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
            RY +++  Y +A++V+P    A    GI L    LG   +A  ++ +A++L P++  +  
Sbjct: 819  RYQEAIASYDQAVEVNPDDHLAWYNRGISLA--SLGHYQEAIASYDKAVELKPDDHNS-- 874

Query: 191  ALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                 + + N  A + +  E +    +A E+ P    A     N     G +       +
Sbjct: 875  ----WNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIASYD 930

Query: 248  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
             A+ +    P    ++ N   S H+ G Y++A   Y  +V+   KP   +  +   G   
Sbjct: 931  KAVELK---PDNHLAWNNRGSSLHNLGRYQEAITSYNKAVEL--KPDNHL-AWNNRGSSL 984

Query: 308  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
              LG ++ A+T++ K +E+ PD  E     G     LG+ E+A     KA ++ P D  A
Sbjct: 985  HNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHLA 1044

Query: 368  FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQS 425
            + + G  L +      L  ++ A     KA +  P +   L N G IH   G+ + A   
Sbjct: 1045 WNNRGNSLKN------LGRYEEAIASYDKAVDIKPDDHKALANRGDIHRRLGQHQQALAD 1098

Query: 426  FKDAL 430
               A+
Sbjct: 1099 LNHAI 1103



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 175/395 (44%), Gaps = 32/395 (8%)

Query: 42   NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 101
            +ALG Y      ++  Q  ++E  I +   Y+ A  I+ ++ ++W  +G  L+  G  E+
Sbjct: 701  DALGWYNK---GVQLGQLGRDEEAIAS---YDNAVNINPNDHNSWNNRGNSLVNLGRYEE 754

Query: 102  ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
            A +++   +E + ++  A   +     N GRY +++  Y +A++V+P    A     G  
Sbjct: 755  AIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAW-YSRGNS 813

Query: 162  RYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFE 217
               LG+  +A  ++ +A++++P++  A     ++LA +          ++ +    +A E
Sbjct: 814  LANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASL-------GHYQEAIASYDKAVE 866

Query: 218  IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
            + P    + N   N     G++       + A+ V    P    ++YN   S  S G Y+
Sbjct: 867  LKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEV---NPDNHSAWYNRGNSLASLGHYQ 923

Query: 278  KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
            +A   Y  +V+   KP   +  +   G     LG ++ A+T++ K +E+ PDN       
Sbjct: 924  EAIASYDKAVEL--KPDNHL-AWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNR 980

Query: 338  GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 397
            G     LG+ ++A     KA ++ P   +A+ + G  L      A L  ++ A     KA
Sbjct: 981  GSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSL------ANLGRYEEAIASYDKA 1034

Query: 398  GEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
             E  P + L  NN G      G +E A  S+  A+
Sbjct: 1035 VELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAV 1069



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 159/370 (42%), Gaps = 36/370 (9%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            +NKA  I   +   W  KG  L   G  E+A +++   +  + ++  +   +     N G
Sbjct: 691  HNKALEIKPDDALGWYNKGVQLGQLGRDEEAIASYDNAVNINPNDHNSWNNRGNSLVNLG 750

Query: 132  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            RY +++  Y +A++V+P+   A     G     LG+  +A  ++ +A++++P+N  A  +
Sbjct: 751  RYEEAIASYDKAVEVNPNDHNAWN-NRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAWYS 809

Query: 192  LAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
                  + N  A + +  E +    +A E+ P          +H  +  +   +  L   
Sbjct: 810  ------RGNSLANLGRYQEAIASYDQAVEVNP---------DDHLAWYNRGISLASLGHY 854

Query: 249  ALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
              A+ ++       P   +S+ N   S  + G YE+A   Y  +V E+N  +     +Y 
Sbjct: 855  QEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAV-EVNPDNHSA--WYN 911

Query: 303  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
             G     LG ++ A+ +++K +E+ PDN       G     LG+ ++A     KA ++ P
Sbjct: 912  RGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKP 971

Query: 363  RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 420
             +  A+ + G  L +      L  ++ A T   KA E  P   E  NN G      G +E
Sbjct: 972  DNHLAWNNRGSSLHN------LGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYE 1025

Query: 421  SAHQSFKDAL 430
             A  S+  A+
Sbjct: 1026 EAIASYDKAV 1035



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 140/335 (41%), Gaps = 46/335 (13%)

Query: 129 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV-- 186
           N G Y +++  Y +AL ++P    A  +G G    KL +  +A  +  +AL++ P++   
Sbjct: 646 NLGHYVEAIASYDKALNINPDDHNAW-IGKGTALEKLRKYKEALISHNKALEIKPDDALG 704

Query: 187 ---------------EALVAL-AVMDLQANEAAGIR-------------KGMEKMQRAFE 217
                          EA+ +    +++  N+                  + +    +A E
Sbjct: 705 WYNKGVQLGQLGRDEEAIASYDNAVNINPNDHNSWNNRGNSLVNLGRYEEAIASYDKAVE 764

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           + P    A N   N     G++       + A+ V    P    ++Y+   S  + G Y+
Sbjct: 765 VNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEV---NPDNHSAWYSRGNSLANLGRYQ 821

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A   Y  +V E+N P + +  +Y  G     LG ++ A+ +++K +E+ PD+  +    
Sbjct: 822 EAIASYDQAV-EVN-PDDHL-AWYNRGISLASLGHYQEAIASYDKAVELKPDDHNSWNNR 878

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 397
           G+    LG+ E+A     +A +++P +  A+ + G  L      A+L  ++ A     KA
Sbjct: 879 GNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSL------ASLGHYQEAIASYDKA 932

Query: 398 GEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
            E  P   L  NN G      G ++ A  S+  A+
Sbjct: 933 VELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAV 967


>gi|330820193|ref|YP_004349055.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
 gi|327372188|gb|AEA63543.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
          Length = 786

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 10/289 (3%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
           + +G +  A     +A  A++  L  D D++ A    A    + G+ + ++E Y   L+ 
Sbjct: 75  LARGHVFAAAQCFAEAIGAYRQALALDADSIDAHFALASALQSAGQAAPAIEAYTALLER 134

Query: 147 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 206
            P+   A+   +G C  +LG+   A+ A+ RAL+L P + +AL  L  + L   +   + 
Sbjct: 135 DPARVDALN-NLGNCHRQLGEHQAAQAAYLRALELQPGDADALTNLGTLALATGQ---LD 190

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
           + +  ++ A ++ P   + L  L       G+      L    LA+    P    + YNL
Sbjct: 191 ESVALLEMARQVAPDSPVVLANLGVALHRHGEFARSAALLTRTLALD---PVFPEAAYNL 247

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
           A + H+ G   +A  +Y  ++++     +    Y  LG V  + G    A   F+  + +
Sbjct: 248 ANALHALGRRREALDHYQRAIEQAPAHAD---AYNNLGVVYQEAGSLHDAADAFDTAIRL 304

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
                  L  L      LG +++A+  LR A  +DPR + +  +LG +L
Sbjct: 305 RSAFLAALNNLAVTMRMLGAMDEAEARLRDALAVDPRHSASHNNLGNVL 353



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 45/298 (15%)

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANE-AAGIRKGMEKMQRAFEIYPYCAM 224
           G+L +AR+ +QRAL L+P     +  L +++LQ+   AA +      + RA     Y   
Sbjct: 17  GRLAEARELYQRALALEPGEANLMFRLGMLELQSGAYAAALDWLDAALARAPGNARY--- 73

Query: 225 ALNYLANHFFFTGQHFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
              +LA    F       E +     ALA+         +++ LA +  S G    A   
Sbjct: 74  ---HLARGHVFAAAQCFAEAIGAYRQALALDA---DSIDAHFALASALQSAGQAAPAIEA 127

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
           Y A ++   +    +     LG    +LG+ ++A   + + LE+ P + + L  LG + +
Sbjct: 128 YTALLE---RDPARVDALNNLGNCHRQLGEHQAAQAAYLRALELQPGDADALTNLGTLAL 184

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-------------------------IS 377
             GQ++++  LL  A ++ P       +LG  L                          +
Sbjct: 185 ATGQLDESVALLEMARQVAPDSPVVLANLGVALHRHGEFARSAALLTRTLALDPVFPEAA 244

Query: 378 SDTGAALDAFKTARTLL---KKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +   AL A    R  L   ++A E+ P   +  NN+GV++ E G    A  +F  A+
Sbjct: 245 YNLANALHALGRRREALDHYQRAIEQAPAHADAYNNLGVVYQEAGSLHDAADAFDTAI 302


>gi|20090225|ref|NP_616300.1| O-linked N-acetylglucosamine transferase [Methanosarcina
           acetivorans C2A]
 gi|19915217|gb|AAM04780.1| O-linked N-acetylglucosamine transferase [Methanosarcina
           acetivorans C2A]
          Length = 292

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 28/293 (9%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W  KG  L      ++A  A+   LE   DN   L  +  V  +  RY ++L+ +++AL+
Sbjct: 6   WYSKGVALQELKRYKEALDAYNKALEISPDNPKILFNKGLVLKSLMRYDEALDAFEKALE 65

Query: 146 VHPS-----CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQ 198
           ++P+     C  A  L +G+ +Y+     +A  AF RA+ L PE+ E      +A+ +++
Sbjct: 66  INPTDAKTWCFKA-ELLLGIMKYE-----EALDAFYRAVSLAPEDPEVWYRRGMALREMR 119

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-- 256
           A E A     M+ +++A ++Y       +  A+ +   G      +  + AL   N    
Sbjct: 120 AYEDA-----MDDLEKAIQLYSKNYDISSMSASEWCKKGMGLCKIKSYQEALDAFNRALE 174

Query: 257 --PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN-----KPHEFIFPYYGLGQVQLK 309
             PT   + YN   +    G  E+A LY   +V+  +      P    F +Y  G     
Sbjct: 175 LNPTNGKALYNKGVALRWLGKNEEAKLYLEKAVEVFDGKIKANPENARF-WYNKGIALRD 233

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           L  ++ AL  FEK ++I P   +     G +Y ++ + +KA E   +A  I+P
Sbjct: 234 LERYKEALEAFEKAIDINPSFTKAWIGKGIVYDRVKKHQKAMEAYERAVDINP 286



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 21/160 (13%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF--KIVLEADRDNVPALLGQACVEFN 129
           + KA  I+  +  TW  K +LLL   + E+A  AF   + L  +   V    G A  E  
Sbjct: 60  FEKALEINPTDAKTWCFKAELLLGIMKYEEALDAFYRAVSLAPEDPEVWYRRGMALREMR 119

Query: 130 RGRYSDSLEFYKRALQVHP--------SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
              Y D+++  ++A+Q++         S     + G+GLC+ K  Q  +A  AF RAL+L
Sbjct: 120 --AYEDAMDDLEKAIQLYSKNYDISSMSASEWCKKGMGLCKIKSYQ--EALDAFNRALEL 175

Query: 182 DPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
           +P N +AL    +A+  L  NE A +      +++A E++
Sbjct: 176 NPTNGKALYNKGVALRWLGKNEEAKLY-----LEKAVEVF 210



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y  G    +L  ++ AL  + K LEI PDN + L   G +   L + ++A +   KA +
Sbjct: 6   WYSKGVALQELKRYKEALDAYNKALEISPDNPKILFNKGLVLKSLMRYDEALDAFEKALE 65

Query: 360 IDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 393
           I+P DA+ +    ELL+       ALDAF  A +L
Sbjct: 66  INPTDAKTWCFKAELLLGIMKYEEALDAFYRAVSL 100



 Score = 39.7 bits (91), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 9/159 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q Y+K   I     S W  KG  L      ++A  AF   LE +  N  AL  +    
Sbjct: 131 AIQLYSKNYDISSMSASEWCKKGMGLCKIKSYQEALDAFNRALELNPTNGKALYNKGVAL 190

Query: 128 FNRGRYSDSLEFYKRALQVH----PSCPGAIRLGI--GLCRYKLGQLGKARQAFQRALQL 181
              G+  ++  + ++A++V      + P   R     G+    L +  +A +AF++A+ +
Sbjct: 191 RWLGKNEEAKLYLEKAVEVFDGKIKANPENARFWYNKGIALRDLERYKEALEAFEKAIDI 250

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
           +P   +A +   ++    +     +K ME  +RA +I P
Sbjct: 251 NPSFTKAWIGKGIV---YDRVKKHQKAMEAYERAVDINP 286


>gi|356505394|ref|XP_003521476.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY-like [Glycine
           max]
          Length = 919

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 167/394 (42%), Gaps = 66/394 (16%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA-CVEF-NRGRYSDSLEFYKRAL 144
           V    +L ++ +   A S ++ VLE+D  NV AL+G+  C++  N+GR   + E +  A+
Sbjct: 44  VSYANVLRSRNKFVDALSIYERVLESDGANVEALIGKGICLQMQNKGRL--AYESFSEAI 101

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQAN-- 200
           +V P    A+    G+     G+L +A +++Q+ALQ+DP    A   LA++  D+  N  
Sbjct: 102 KVDPQNACALT-HCGILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIK 160

Query: 201 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHG 256
            A   + G++K   A ++ P+ A A       ++  G  +      +TAL+      +  
Sbjct: 161 LAGNTQDGIQKYFEALKVDPHYAPA-------YYNLGVVYSEMMQYDTALSFYEKAASER 213

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-----EINKPHEFIF------------- 298
           P  + +Y N+   + ++GD E A   Y   +      EI K +  I              
Sbjct: 214 PIYAEAYCNMGVIFKNRGDLESAITCYERCLTVSPNFEIAKNNMAIALTDLGTKVKLEGD 273

Query: 299 --------------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
                                 Y LG    ++  F  A+  +E      P   E    LG
Sbjct: 274 INQGVTLYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLG 333

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 398
            IY     ++KA E  + A  I P  +Q+  +LG   +       +DA   A ++++KA 
Sbjct: 334 VIYKDRENLDKAVECYQLALSIKPNFSQSLNNLG---VVYTVQGKVDA---AASMIEKAI 387

Query: 399 EEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 430
              P   E  NN+GV++ + G+   A  +++  L
Sbjct: 388 IANPTYAEAYNNLGVLYRDAGDIARAINAYEQCL 421



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 33/262 (12%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK----AQELLRK---AAKIDPR 363
           G    A  +++K L++ P      + L  +   +G   K     Q+ ++K   A K+DP 
Sbjct: 122 GRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQDGIQKYFEALKVDPH 181

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFES 421
            A A+ +LG +       + +  + TA +  +KA  E PI  E   N+GVI   +G+ ES
Sbjct: 182 YAPAYYNLGVVY------SEMMQYDTALSFYEKAASERPIYAEAYCNMGVIFKNRGDLES 235

Query: 422 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH-VEL----- 475
           A   ++  L          + +  + I  +   +   D+    + E D N  V L     
Sbjct: 236 AITCYERCL----------TVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTLYKKAL 285

Query: 476 --PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
              W+    ++NL     ++     A V Y L         +A   L  I K R NL  +
Sbjct: 286 YYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRENLDKA 345

Query: 534 IELVNEALKVNGKYPNALSMLG 555
           +E    AL +   +  +L+ LG
Sbjct: 346 VECYQLALSIKPNFSQSLNNLG 367


>gi|406954284|gb|EKD83208.1| hypothetical protein ACD_39C00819G0002 [uncultured bacterium]
          Length = 447

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 146/349 (41%), Gaps = 30/349 (8%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            +L L  G+ + A +  + +L+ D DN   ++  A     RG Y ++    +RAL++ P 
Sbjct: 33  SRLYLRNGDNKSAEAVIEKILKIDPDNAQVMVEFADCLIRRGAYEEAAYNIERALELRPG 92

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQA--FQRALQLDPENVEALVALAVMDLQANEAAGIRK 207
              A    I + R    Q    +Q     RA    PE +E  +ALA M  +  +  G   
Sbjct: 93  MSSAF---IAMARLHEAQGCVEKQVSFMMRAANAAPEKIEVRLALAEMLKRYGDFNG--- 146

Query: 208 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL----AVTNHGPTKSHSY 263
            + + ++  EI P    AL       F  G   L +     A+     +  + P    ++
Sbjct: 147 AVGQYRQILEIQPDLEAAL-------FSLGTMLLRQDDLNGAMNSFRQIIRNNPGAFDAH 199

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           +NLA     +  +  A  ++  + +   KP       Y + Q   K  D+ SA+   EK+
Sbjct: 200 FNLASGLFRQSKFVMAANHFRVAQR---KPELAQRSLYLMAQCYFKQRDYDSAIVTLEKL 256

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 383
           L++   N   LK+L  IY    +++ A+E+ R+   + P   +  + L  ++I+      
Sbjct: 257 LQLDESNVSYLKSLAEIYEAADELDMAREVYRRLTSVAPERPEFLVHLASIMIT------ 310

Query: 384 LDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           LD F+ A   L       P  +E    +G ++  +G+  SA + ++  L
Sbjct: 311 LDDFERAEKTLDTLFRLHPGHVEGHRILGDLYARRGDHRSAIEEYRRTL 359



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/338 (20%), Positives = 140/338 (41%), Gaps = 32/338 (9%)

Query: 84  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           S ++   +L  A+G VE+  S       A  + +   L  A +    G ++ ++  Y++ 
Sbjct: 95  SAFIAMARLHEAQGCVEKQVSFMMRAANAAPEKIEVRLALAEMLKRYGDFNGAVGQYRQI 154

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV-------MD 196
           L++ P    A+   +G    +   L  A  +F++ ++ +P   +A   LA          
Sbjct: 155 LEIQPDLEAAL-FSLGTMLLRQDDLNGAMNSFRQIIRNNPGAFDAHFNLASGLFRQSKFV 213

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYC----------AMALNYL-----ANHFFFTGQHFL 241
           + AN     ++  E  QR+  +   C           + L  L     +N  +      +
Sbjct: 214 MAANHFRVAQRKPELAQRSLYLMAQCYFKQRDYDSAIVTLEKLLQLDESNVSYLKSLAEI 273

Query: 242 VEQLTETALA------VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
            E   E  +A      +T+  P +     +LA    +  D+E+A    + ++  ++  H 
Sbjct: 274 YEAADELDMAREVYRRLTSVAPERPEFLVHLASIMITLDDFERAE-KTLDTLFRLHPGH- 331

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
            +  +  LG +  + GD RSA+  + + L I  +N +    L  +Y  L   E+ Q+ L+
Sbjct: 332 -VEGHRILGDLYARRGDHRSAIEEYRRTLMINENNAQVFLGLARVYRALNSAEEEQQALK 390

Query: 356 KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 393
           +A ++   D + F+ LG+L  +    A+LD F+    L
Sbjct: 391 RAVEVGCEDPELFLRLGQLERTMKLPASLDRFRRVSEL 428


>gi|401408423|ref|XP_003883660.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
 gi|325118077|emb|CBZ53628.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
          Length = 987

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 144/356 (40%), Gaps = 68/356 (19%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFN 129
           YN   ++   + + W  KG  L A G V +A    +  L  D  N  AL  +G A  E  
Sbjct: 172 YNAGLKVYADDANLWNCKGVALRALGRVHEALECCREALRLDPRNTNALNNIGVALKE-- 229

Query: 130 RGRYSDSLEFYKRALQVHPSCPGA-IRLGIGL---------------------------- 160
           RG    ++E Y+ +L  +P  P   + L + L                            
Sbjct: 230 RGELLQAVEHYRASLAANPHQPTCRMNLAVALTDLGTKLKQEKKLQAALVCYTEALTADP 289

Query: 161 ----CRYKLGQL-------GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
               C Y LG +         A Q ++ A++++P  VEA           N    + K +
Sbjct: 290 TYAPCYYNLGVIHAETDDPHTALQMYREAVRINPRYVEAY----------NNMGAVCKNL 339

Query: 210 EKMQRAFEIY-------PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN----HGPT 258
            K++ A   Y       P   ++L+ +A      G      +  + A+++      + P 
Sbjct: 340 GKLEDAIAFYEKALACNPNYQLSLSNMAVALTDLGTQQKTFEGAKKAISLYKKALIYNPY 399

Query: 259 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
            S +YYNL  +Y     ++KA + Y  +V    +  E    Y  +G +     +   A+ 
Sbjct: 400 YSDAYYNLGVAYADSHKFDKALVNYQLAVAFNPRCAEA---YNNMGVIHKDRENTDQAIV 456

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            + K LEI PD  +TL  LG +Y   G+I +A +  ++A +++P  A+A+ +LG L
Sbjct: 457 CYNKALEINPDFSQTLNNLGVLYTCTGKIGEALQFAKRAIEVNPSYAEAYNNLGVL 512



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 38/266 (14%)

Query: 336 ALGHIYVQLGQIEKAQELL---RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
           AL  +  +L Q +K Q  L    +A   DP  A  + +LG  +I ++T    D   TA  
Sbjct: 260 ALTDLGTKLKQEKKLQAALVCYTEALTADPTYAPCYYNLG--VIHAET----DDPHTALQ 313

Query: 393 LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGD-----------GIWLTLL 439
           + ++A    P  +E  NN+G +    G+ E A   ++ AL              + LT L
Sbjct: 314 MYREAVRINPRYVEAYNNMGAVCKNLGKLEDAIAFYEKALACNPNYQLSLSNMAVALTDL 373

Query: 440 DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 499
            ++ KT+   A  ++  +K   +++ + +D              +NL       H    A
Sbjct: 374 GTQQKTFE-GAKKAISLYKKALIYNPYYSDA------------YYNLGVAYADSHKFDKA 420

Query: 500 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 559
            V Y+L +       +AY  +  I K R N   +I   N+AL++N  +   L+ LG L  
Sbjct: 421 LVNYQLAVAFNPRCAEAYNNMGVIHKDRENTDQAIVCYNKALEINPDFSQTLNNLGVLYT 480

Query: 560 KNDDWVKAKETFRAASDATDGKDSYA 585
                 K  E  + A  A +   SYA
Sbjct: 481 CTG---KIGEALQFAKRAIEVNPSYA 503


>gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 436

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 11/235 (4%)

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 190
           +Y  +++ + R +++  S PG   +G+G     LG+  +A   F RAL +DPEN EAL  
Sbjct: 30  KYEAAVQTFNRGIELDRSHPGCW-VGMGKAFLGLGRYDRADDCFIRALDIDPENPEALTM 88

Query: 191 ---ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
               L ++ LQ  +     + +E   +  +I+P    AL+      +  G+      L E
Sbjct: 89  RASVLRLIALQNQDPMRCLEAVEICNKTLKIHPEYGPALHEKGMALWTLGKRDEAMSLFE 148

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            A  +    P   + +    R    K  Y +A   Y  ++++  +  + +F    +G+  
Sbjct: 149 QAKKIHASYP---YPWDLKGRYLFEKRQYHEAIEAYEEALEKKPQDPDLLF---SMGRAL 202

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           +K+G + SA+  F+K L+I PD       LG+ Y  L Q ++A +   +A ++DP
Sbjct: 203 MKIGGYHSAIQFFKKCLKIRPDYTAAWLLLGNSYKVLNQFDEAIDAYEEAMELDP 257



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 80/366 (21%), Positives = 147/366 (40%), Gaps = 63/366 (17%)

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           +E +  A Q +N+   +D   P  WVG G+  L  G  ++A   F   L+ D +N  AL 
Sbjct: 28  KEKYEAAVQTFNRGIELDRSHPGCWVGMGKAFLGLGRYDRADDCFIRALDIDPENPEALT 87

Query: 122 GQA---------------CVE--------------------------FNRGRYSDSLEFY 140
            +A               C+E                          +  G+  +++  +
Sbjct: 88  MRASVLRLIALQNQDPMRCLEAVEICNKTLKIHPEYGPALHEKGMALWTLGKRDEAMSLF 147

Query: 141 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL--AVMDLQ 198
           ++A ++H S P    L  G   ++  Q  +A +A++ AL+  P++ + L ++  A+M + 
Sbjct: 148 EQAKKIHASYPYPWDLK-GRYLFEKRQYHEAIEAYEEALEKKPQDPDLLFSMGRALMKI- 205

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 258
                G    ++  ++  +I P    A   L N +    Q        E A+ + + G T
Sbjct: 206 ----GGYHSAIQFFKKCLKIRPDYTAAWLLLGNSYKVLNQFDEAIDAYEEAMEL-DPGST 260

Query: 259 KSHSYYNLARSY--------HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
           K   Y  +A  Y        + +G  ++A  Y+  +++ I      I  ++  G    KL
Sbjct: 261 KYRKY--IADVYLVMGKEALYKEGKPQEAIEYFDKTIRMIAN---HITAWFSKGVAYKKL 315

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G +R+A   F KV+E+ P N      +  I  + G  E+A     +  + DP    A   
Sbjct: 316 GAYRNATACFLKVVEMDPQNGHAYYEMAQILEKTGNNEEAIRCYLETIRCDPSHTDAMYK 375

Query: 371 LGELLI 376
           +G LL+
Sbjct: 376 VGNLLM 381



 Score = 43.1 bits (100), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 16/251 (6%)

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
           PY   G+ QL    + +A+  F + +E+   +      +G  ++ LG+ ++A +   +A 
Sbjct: 17  PYCQKGETQLVKEKYEAAVQTFNRGIELDRSHPGCWVGMGKAFLGLGRYDRADDCFIRAL 76

Query: 359 KIDPRDAQAFIDLGEL-----LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 413
            IDP + +A      +     L + D    L+A +     LK   E  P   L+  G+  
Sbjct: 77  DIDPENPEALTMRASVLRLIALQNQDPMRCLEAVEICNKTLKIHPEYGP--ALHEKGMAL 134

Query: 414 FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 473
           +  G+ + A   F+ A             +  Y  D     L F+  Q     E     +
Sbjct: 135 WTLGKRDEAMSLFEQAKK--------IHASYPYPWDLKGRYL-FEKRQYHEAIEAYEEAL 185

Query: 474 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
           E       +LF++ R L +I    +A   ++  L    DY  A+L L    K  N    +
Sbjct: 186 EKKPQDPDLLFSMGRALMKIGGYHSAIQFFKKCLKIRPDYTAAWLLLGNSYKVLNQFDEA 245

Query: 534 IELVNEALKVN 544
           I+   EA++++
Sbjct: 246 IDAYEEAMELD 256


>gi|119952992|ref|YP_945201.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135]
 gi|119861763|gb|AAX17531.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135]
          Length = 380

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A + F  +L+ D DN  AL+G   +E  +  +  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLPEAEALFNDILQKDYDNNYALVGLGDIERKKRNFDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  H +   A+  G+G C   LG   KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  IYYQKCLAKHSNNNYAL-FGLGDCYRSLGDYKKATDVWEEYLKYDPENITVLTRVAS--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   R  E  P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSRQSYLRVLEFVPDNDYALVGIG-HLYYDFKEYKEALKYWLRMYEINQVK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ K G+Y+     EI+ P+ F +  +GL        ++  AL
Sbjct: 194 IDVRVLTSIGNCYRKLKEFSK-GIYFFKRALEIS-PNNF-YAIFGLADCYRGSKEYHEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  +++  P N   L  +G  Y  L + E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLTIIDKDPKNNLVLTRVGDTYRYLKEYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    + L+K
Sbjct: 308 KEQGQYEEALSAIKNLIK 325



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 131/305 (42%), Gaps = 15/305 (4%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LG IE K+R    +F  A  YY K      +      G G    + G+ ++A+  ++  L
Sbjct: 64  LGDIERKKR----NFDKAIIYYQKCLAKHSNNNYALFGLGDCYRSLGDYKKATDVWEEYL 119

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           + D +N+  L   A        +  S + Y R L+  P    A+ +GIG   Y   +  +
Sbjct: 120 KYDPENITVLTRVASSYRKLKNFQKSRQSYLRVLEFVPDNDYAL-VGIGHLYYDFKEYKE 178

Query: 171 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
           A + + R  +++   ++  V  ++ +    +     KG+   +RA EI P    A+  LA
Sbjct: 179 ALKYWLRMYEINQVKIDVRVLTSIGNCY-RKLKEFSKGIYFFKRALEISPNNFYAIFGLA 237

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
           + +  + ++    +  +  L + +  P  +     +  +Y    +YE + +YY  ++   
Sbjct: 238 DCYRGSKEY---HEALKYWLTIIDKDPKNNLVLTRVGDTYRYLKEYENSQIYYKKAL--- 291

Query: 291 NKPHEF-IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
               +F +F   GL  +Q + G +  AL+  + +++  P N          Y  LGQIE 
Sbjct: 292 --DVDFDMFAILGLALLQKEQGQYEEALSAIKNLIKTNPKNSILYVNAAECYEALGQIES 349

Query: 350 AQELL 354
           A ++L
Sbjct: 350 AVDIL 354



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           K +++KA +YY   + + +  +  +F   GLG     LGD++ A   +E+ L+  P+N  
Sbjct: 71  KRNFDKAIIYYQKCLAKHSNNNYALF---GLGDCYRSLGDYKKATDVWEEYLKYDPENIT 127

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
            L  +   Y +L   +K+++   +  +  P +  A + +G L    D     +A K    
Sbjct: 128 VLTRVASSYRKLKNFQKSRQSYLRVLEFVPDNDYALVGIGHLY--YDFKEYKEALKYWLR 185

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           + +    ++ + VL +IG  + +  EF      FK AL
Sbjct: 186 MYEINQVKIDVRVLTSIGNCYRKLKEFSKGIYFFKRAL 223


>gi|220907898|ref|YP_002483209.1| hypothetical protein Cyan7425_2491 [Cyanothece sp. PCC 7425]
 gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 689

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 18/336 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           GE+ +AS  ++ VL+     + AL     +   +G    ++ ++++A+QV P+    +  
Sbjct: 18  GELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFRQAVQVAPA-QADLHY 76

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G      G    A  A+Q+AL+L+  ++ A   L  + LQ  E AG    +   Q A 
Sbjct: 77  NLGYALEAWGDGPAAIAAYQQALKLNRNHLAACYNLGELHLQRGEYAG---AIPCFQWAI 133

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           ++ P  ++A   L       G     +      L      P    ++ NL  +Y   G  
Sbjct: 134 QLQPDLSLAHYKLGTALQQQGDP---KAAVSCYLQALQLQPDLVVAHCNLGSAYLDLGQL 190

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
           E A +    S  ++   H      + LG  +      R A+  +EKV+++ P N E    
Sbjct: 191 E-AAITAFQSALQLQPDHTGAL--FNLGLARQTQQQMREAIACYEKVIQLEPQNSEVYNN 247

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI--SSDTGAALDAFKTARTLL 394
           LG+ Y+ +GQ E+A ++ R A  + P D   + +LG+ L+  +  TGAA       R +L
Sbjct: 248 LGNAYLAVGQPERAIDVFRWATALKPDDLTLWYNLGKTLLEQADWTGAA----ACFRHVL 303

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +   I VL  +G     +G+  +A  +++ AL
Sbjct: 304 ALNPQLSYIHVL--LGSALVGQGDLPAASAAYQQAL 337



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 159/381 (41%), Gaps = 47/381 (12%)

Query: 19  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 78
           + G   E  + Y  V  +    L+AL V    LG I  +Q + E     A  Y+ +A ++
Sbjct: 16  QAGELAEASQLYQRVLQQHPGQLDALQV----LGMIAAQQGDVET----AISYFRQAVQV 67

Query: 79  DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
              +       G  L A G+   A +A++  L+ +R+++ A      +   RG Y+ ++ 
Sbjct: 68  APAQADLHYNLGYALEAWGDGPAAIAAYQQALKLNRNHLAACYNLGELHLQRGEYAGAIP 127

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLG----QLGKARQA---FQRALQLDPENVEALVA 191
            ++ A+Q+ P         + L  YKLG    Q G  + A   + +ALQL P+ V A   
Sbjct: 128 CFQWAIQLQPD--------LSLAHYKLGTALQQQGDPKAAVSCYLQALQLQPDLVVAHCN 179

Query: 192 L--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
           L  A +DL   EAA     +   Q A ++ P    AL       F  G     +Q    A
Sbjct: 180 LGSAYLDLGQLEAA-----ITAFQSALQLQPDHTGAL-------FNLGLARQTQQQMREA 227

Query: 250 LA----VTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLG 304
           +A    V    P  S  Y NL  +Y + G  E+A  ++  A+     KP +    +Y LG
Sbjct: 228 IACYEKVIQLEPQNSEVYNNLGNAYLAVGQPERAIDVFRWATAL---KPDDLTL-WYNLG 283

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
           +  L+  D+  A   F  VL + P        LG   V  G +  A    ++A K+DP  
Sbjct: 284 KTLLEQADWTGAAACFRHVLALNPQLSYIHVLLGSALVGQGDLPAASAAYQQALKLDPEL 343

Query: 365 AQAFIDLGELLI-SSDTGAAL 384
             A   +   L+ S +  AAL
Sbjct: 344 VAAHHGIASALLESGEVDAAL 364



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 52/313 (16%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
           Y+ G+L +A Q +QR LQ  P  ++AL  L ++  Q  +   +   +   ++A ++ P  
Sbjct: 15  YQAGELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGD---VETAISYFRQAVQVAPAQ 71

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY--------------YNLAR 268
           A  L+Y   +                AL     GP    +Y              YNL  
Sbjct: 72  A-DLHYNLGY----------------ALEAWGDGPAAIAAYQQALKLNRNHLAACYNLGE 114

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            +  +G+Y  A   +  +++   +P +    +Y LG    + GD ++A++ + + L++ P
Sbjct: 115 LHLQRGEYAGAIPCFQWAIQL--QP-DLSLAHYKLGTALQQQGDPKAAVSCYLQALQLQP 171

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           D       LG  Y+ LGQ+E A    + A ++ P    A  +LG   ++  T   +   +
Sbjct: 172 DLVVAHCNLGSAYLDLGQLEAAITAFQSALQLQPDHTGALFNLG---LARQTQQQM---R 225

Query: 389 TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 446
            A    +K  +  P   EV NN+G  +   G+ E A   F+       W T L     T 
Sbjct: 226 EAIACYEKVIQLEPQNSEVYNNLGNAYLAVGQPERAIDVFR-------WATALKPDDLTL 278

Query: 447 VIDASASMLQFKD 459
             +   ++L+  D
Sbjct: 279 WYNLGKTLLEQAD 291



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 608 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 667
           +A  L +A +LY RV+ QH   L A    G++ A++G  + +   F Q  + A       
Sbjct: 16  QAGELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFRQAVQVAPAQA--- 72

Query: 668 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY-LARTHYEAEQWQDCKK 726
             D+  NL +   A G+   A+  YQ  L+    N +     Y L   H +  ++     
Sbjct: 73  --DLHYNLGYALEAWGDGPAAIAAYQQALK---LNRNHLAACYNLGELHLQRGEYAGAIP 127

Query: 727 SLLRAIHLAPSNYTLRFDAGVAMQK 751
               AI L P      +  G A+Q+
Sbjct: 128 CFQWAIQLQPDLSLAHYKLGTALQQ 152


>gi|423064372|ref|ZP_17053162.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
 gi|406713615|gb|EKD08783.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
          Length = 608

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 163/387 (42%), Gaps = 41/387 (10%)

Query: 68  ATQYYNKASRIDMHEP---STWVGKGQLLLAKGEVEQASSAFKIVLEADRDN-------- 116
           A   ++KA  I+  EP     W+ +G +L+   + + A ++F   L  + ++        
Sbjct: 217 AIASFDKALEIN-PEPEDDGIWISRGNVLVKLNKYKDAITSFDRALAINPNDQQVSQKRE 275

Query: 117 ---------VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
                       L  QA   +  G    SLE + + +++ P       L  GL    LG+
Sbjct: 276 DLLNQLNQLADNLFDQAMGLYGAGEMERSLELFNQLVEIKPDNFFMWYLR-GLALASLGR 334

Query: 168 LGKARQAFQRALQLDPENVEALVAL--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
             +A  ++ + L +DP +  A  +   A+M+L  +E A     ++  Q+A EI P    A
Sbjct: 335 FEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEA-----VQSYQKALEINPDHHEA 389

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
            + L       G++       + +L   +    +  S+ +   +  + G YE+A   Y  
Sbjct: 390 WHNLGGALTSLGRYQEAIVCYDKSLVANSE---QDRSWLDKGSALLNLGRYEEAFASYEK 446

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
           ++ E+N  ++    +  L  +   L +++ ALT +EK L I  +N  T   LG+  + LG
Sbjct: 447 AL-EVNPSNDL--AWTALAGILADLREYQKALTFYEKALSINSNNGLTWYNLGNTLIDLG 503

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIE 404
             EKA +    A  I+P D QA+ +LG  L +    G A+ ++  A  +          E
Sbjct: 504 SHEKAVQCYENALFINPDDEQAWYNLGNALAVLKRYGEAVKSYDKALAIKPDKH-----E 558

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDALG 431
              N G    + G +E A  SF  AL 
Sbjct: 559 AWFNRGNALDDWGRYEEAIASFDKALA 585



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 128/308 (41%), Gaps = 60/308 (19%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 125
           A   Y+K   +D  + S W  +G  L+  G  E+A  +++  LE + D+  A   LG A 
Sbjct: 338 AITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINPDHHEAWHNLGGAL 397

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
                GRY +++  Y ++L V  S      L  G     LG+  +A  ++++AL+++P N
Sbjct: 398 TSL--GRYQEAIVCYDKSL-VANSEQDRSWLDKGSALLNLGRYEEAFASYEKALEVNPSN 454

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
             A  ALA          GI   + + Q+A   Y                          
Sbjct: 455 DLAWTALA----------GILADLREYQKALTFY-------------------------- 478

Query: 246 TETALAV-TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP----- 299
            E AL++ +N+G T    +YNL  +    G +EKA   Y  ++        FI P     
Sbjct: 479 -EKALSINSNNGLT----WYNLGNTLIDLGSHEKAVQCYENAL--------FINPDDEQA 525

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y LG     L  +  A+ +++K L I PD  E     G+     G+ E+A     KA  
Sbjct: 526 WYNLGNALAVLKRYGEAVKSYDKALAIKPDKHEAWFNRGNALDDWGRYEEAIASFDKALA 585

Query: 360 IDPRDAQA 367
           I+P +  A
Sbjct: 586 INPHNEAA 593



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 146/330 (44%), Gaps = 48/330 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN------VPALL 121
           A + Y++A +I  +  S W+ KG LL+ + +   A+ +++  LE + +N      +  LL
Sbjct: 98  AIKSYDQAIKIKPNSDSLWIEKGDLLVQQNQTRLAADSYQRALEINPNNHQVSQKLEGLL 157

Query: 122 GQ-------ACVEFNR----GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
            Q          E N     G    SLE Y + +++ P+   A   G G+    LG+  +
Sbjct: 158 NQLQELAENLLTEGNHLYEAGEVERSLELYNQVVELQPNQDSAW-YGRGVALADLGRNEE 216

Query: 171 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK---GMEKMQRAFEIYPYCAMALN 227
           A  +F +AL+++PE  +  + ++    + N    + K    +    RA  I P       
Sbjct: 217 AIASFDKALEINPEPEDDGIWIS----RGNVLVKLNKYKDAITSFDRALAINP------- 265

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
              +      +  L+ QL + A            + ++ A   +  G+ E++ L     +
Sbjct: 266 --NDQQVSQKREDLLNQLNQLA-----------DNLFDQAMGLYGAGEMERS-LELFNQL 311

Query: 288 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 347
            EI KP  F F +Y  G     LG F  A+T+++K L + P +     + G+  + LG  
Sbjct: 312 VEI-KPDNF-FMWYLRGLALASLGRFEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGH 369

Query: 348 EKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
           E+A +  +KA +I+P   +A+ +LG  L S
Sbjct: 370 EEAVQSYQKALEINPDHHEAWHNLGGALTS 399


>gi|198282345|ref|YP_002218666.1| hypothetical protein Lferr_0200 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198246866|gb|ACH82459.1| TPR repeat-containing protein [Acidithiobacillus ferrooxidans ATCC
           53993]
          Length = 505

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 151/350 (43%), Gaps = 25/350 (7%)

Query: 32  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 91
           ++ +  IAI N+       LG++  +Q +  +    A +  + A  I+ +  +       
Sbjct: 140 NILHNLIAIKNSPSNEMAMLGEVLRRQGKLSD----AERVLSDALNINENNVAALHNLSV 195

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           LLL      +A  A   VL    DN  ++     +   + R S+    +++AL + P+ P
Sbjct: 196 LLLYLNRYSEAEHAIMKVLSLMPDNAESIFILGAISVGKKRLSEGEIAFRKALSIKPAYP 255

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
            A+ + +G      G++ +A   F++AL + P+ +EAL+ L V       A G +  M++
Sbjct: 256 EAL-MNLGAILSDQGRVDEAIGTFRKALTIKPDYLEALMRLGV-------ALGRQDRMDE 307

Query: 212 ----MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
               +++A  I P    AL  L       G+    E L   AL +    P    +  NL 
Sbjct: 308 AETVLRKALAIKPDYPEALMNLGVTLGHEGRWEETETLLRQALTIK---PDYPEALMNLG 364

Query: 268 RSYHSKGDY--EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
            +   +G    E   +       + + P   +     LG    K G +  A T   + + 
Sbjct: 365 AALSRQGRCLDEAENILRRTLAIQPDHPDALV----NLGATLNKQGRWNEAETILRQAVA 420

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           I P++ + L  LG +  + G++++A+ +LR+A  I P  A A ++LG +L
Sbjct: 421 IKPEHADALINLGAVLSKQGRLDEAETILRQALTIMPDQADALVNLGVIL 470


>gi|406935176|gb|EKD69225.1| hypothetical protein ACD_47C00214G0001, partial [uncultured
           bacterium]
          Length = 1290

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 160/392 (40%), Gaps = 78/392 (19%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           AT  + KA  +    P   +  G+ L+    + +A S F  +L ++  NV ALL  A ++
Sbjct: 449 ATTLFMKALELSPDMPEITLEIGECLMNARRLPEAVSYFLKLLSSEPKNVRALLNLARIK 508

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G  +++  FY+R  +V  +   A RLG+    Y  GQL KA   +Q AL++ P++++
Sbjct: 509 ETLGETNNAFSFYERLYEVDENNVDA-RLGMAKILYSRGQLDKAMFLYQGALKMRPDSLD 567

Query: 188 ALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            L AL+ + ++     EA G+   + K +                               
Sbjct: 568 ILNALSEIYMKLKHEPEALGVFHEILKSE------------------------------- 596

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM--------ASV-KEINKPHE 295
                       P  + +  NLA+ Y S+  Y +A  YY+        ASV KE+ +   
Sbjct: 597 ------------PKNTGAMLNLAKLYRSRAQYGEALKYYLELGFDYEAASVYKELGETAN 644

Query: 296 FIFPYYG---------------LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
            I  YY                 G++ LK   +  AL +   V+E+ PD+       G +
Sbjct: 645 AI-TYYDRAVKADPSNASARVEAGELYLKQKKYAEALKHLNVVIEMKPDSFHAHYLSGLV 703

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 400
             + G  E+A+    +  KID   + +F  L E   + +  A   A       LK     
Sbjct: 704 NFEQGLYERARGEFEQCVKIDGTSSDSFFYLAESHYNVENYAQAKA-----NYLKSQSLS 758

Query: 401 VPIEVLNN-IGVIHFEKGEFESAHQSFKDALG 431
             I +++N +G I+F++  FE+A   FK  + 
Sbjct: 759 SDILLIHNRLGYINFKEHNFEAAESEFKKVIA 790



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 145/350 (41%), Gaps = 20/350 (5%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
           +++G   +L  +G V +A    K  LE + D V  ++    V +    Y  +LE Y++A 
Sbjct: 56  SYLGMALILKQQGAVSEAILMMKKALEIEPDFVECIMHLGAVYYELEDYKRALECYQKAP 115

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEA 202
            +  +   A+ L  G C + L Q  +A + F   + ++ E  ++   V L+ + L  N A
Sbjct: 116 AIDATEIDAV-LKCGFCHFMLKQYVEAEEKFSYIVSINDEKYSLTCFVQLSEIALIKNNA 174

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
                 +EK   A  + P     +  LA+ +F   +        +T L ++   P    +
Sbjct: 175 EAAAGYLEK---ACALAPSDGDIVKKLADAYFRLDRSSEAIDRYKTLLTIS---PKLKEA 228

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
              L   Y    +Y  A  Y      E  +  E I     L + + +L  F  A+T++++
Sbjct: 229 ELKLGILYARVSNYNDAMFYLSRVADEYAESLELI---SSLAKCEFELRRFDDAMTHYKR 285

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 382
           +L   PD+ E L  +  I       E+AQ  L K  KI P D +A+      L++ +   
Sbjct: 286 LLTYSPDDLEALYKVAEIDYGRKNYEEAQTALNKYIKIKPGDFKAY------LLNGNCAK 339

Query: 383 ALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            ++ F  A     K  +  P   EV   +G ++F+  + E A   F   L
Sbjct: 340 KMNNFDAAVDNYMKCRDIAPEYSEVNMALGGLYFDLHKEELALTCFNKVL 389



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
            P  S +Y+ + R+Y   G+  +A + +  +++E  K +     Y G+  +  + G    
Sbjct: 16  APKNSRAYFEMGRTYSDMGNGSEALVLFRNAIEENAKDYR---SYLGMALILKQQGAVSE 72

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           A+   +K LEI PD  E +  LG +Y +L   ++A E  +KA  ID  +  A +  G
Sbjct: 73  AILMMKKALEIEPDFVECIMHLGAVYYELEDYKRALECYQKAPAIDATEIDAVLKCG 129



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 112/503 (22%), Positives = 194/503 (38%), Gaps = 49/503 (9%)

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
           +  + P    + Y +A   + + +YE+A       +K   KP +F   Y   G    K+ 
Sbjct: 286 LLTYSPDDLEALYKVAEIDYGRKNYEEAQTALNKYIK--IKPGDFK-AYLLNGNCAKKMN 342

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           +F +A+ N+ K  +I P+  E   ALG +Y  L + E A     K  + +P +  A    
Sbjct: 343 NFDAAVDNYMKCRDIAPEYSEVNMALGGLYFDLHKEELALTCFNKVLEKEPFNVNANY-- 400

Query: 372 GELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDA 429
               +S+ +  AL  F  A    KK  E  P   + L  +  +      +E A   F  A
Sbjct: 401 ----MSAQSMLALSNFAGAAAGFKKVIELQPANKDALIKLARLKKSNANYEEATTLFMKA 456

Query: 430 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL----PWNKVTVLFN 485
           L        L        ++    ++  + +      E     ++L    P N V  L N
Sbjct: 457 LE-------LSPDMPEITLEIGECLMNARRLP-----EAVSYFLKLLSSEPKN-VRALLN 503

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
           LAR+ E + +T  A   Y  +    ++ VDA L +A I  +R  L  ++ L   ALK+  
Sbjct: 504 LARIKETLGETNNAFSFYERLYEVDENNVDARLGMAKILYSRGQLDKAMFLYQGALKMRP 563

Query: 546 KYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGN-----------WNY 594
              + L+ L ++ +K     +A   F      ++ K++ A L+L               Y
Sbjct: 564 DSLDILNALSEIYMKLKHEPEALGVFHEILK-SEPKNTGAMLNLAKLYRSRAQYGEALKY 622

Query: 595 FAALRNEKRAPKL--EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 652
           +  L  +  A  +  E      A   Y R +    SN  A   AG +  ++ ++  +   
Sbjct: 623 YLELGFDYEAASVYKELGETANAITYYDRAVKADPSNASARVEAGELYLKQKKYAEALKH 682

Query: 653 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 712
              V E    S         +N     F QG +  A   ++ C++     T +    YLA
Sbjct: 683 LNVVIEMKPDSFHAHYLSGLVN-----FEQGLYERARGEFEQCVK--IDGTSSDSFFYLA 735

Query: 713 RTHYEAEQWQDCKKSLLRAIHLA 735
            +HY  E +   K + L++  L+
Sbjct: 736 ESHYNVENYAQAKANYLKSQSLS 758



 Score = 43.5 bits (101), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 112/291 (38%), Gaps = 19/291 (6%)

Query: 94  LAKGEVE-----QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           LAK E E      A + +K +L    D++ AL   A +++ R  Y ++     + +++ P
Sbjct: 266 LAKCEFELRRFDDAMTHYKRLLTYSPDDLEALYKVAEIDYGRKNYEEAQTALNKYIKIKP 325

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQANEAAGIR 206
               A  L  G C  K+     A   + +   + PE  E  +AL  +  DL   E A   
Sbjct: 326 GDFKAYLLN-GNCAKKMNNFDAAVDNYMKCRDIAPEYSEVNMALGGLYFDLHKEELA--- 381

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
             +    +  E  P+   A NY++        +F           V    P    +   L
Sbjct: 382 --LTCFNKVLEKEPFNVNA-NYMSAQSMLALSNF--AGAAAGFKKVIELQPANKDALIKL 436

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
           AR   S  +YE+A   +M +++      E       +G+  +       A++ F K+L  
Sbjct: 437 ARLKKSNANYEEATTLFMKALELSPDMPEITLE---IGECLMNARRLPEAVSYFLKLLSS 493

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
            P N   L  L  I   LG+   A     +  ++D  +  A + + ++L S
Sbjct: 494 EPKNVRALLNLARIKETLGETNNAFSFYERLYEVDENNVDARLGMAKILYS 544



 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 153/705 (21%), Positives = 273/705 (38%), Gaps = 147/705 (20%)

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA----- 178
           A  EF   R+ D++  YKR L   P    A+        YK+ ++   R+ ++ A     
Sbjct: 267 AKCEFELRRFDDAMTHYKRLLTYSPDDLEAL--------YKVAEIDYGRKNYEEAQTALN 318

Query: 179 --LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA-MALNYLANHFFF 235
             +++ P + +A +      L  N A    K M     A + Y  C  +A  Y   +   
Sbjct: 319 KYIKIKPGDFKAYL------LNGNCA----KKMNNFDAAVDNYMKCRDIAPEYSEVNMAL 368

Query: 236 TGQHFLV--EQLTETAL-AVTNHGPTKSHSYYNLARSYHSKGDYE--KAGLYYMASVKEI 290
            G +F +  E+L  T    V    P   ++ Y  A+S  +  ++    AG   +  ++  
Sbjct: 369 GGLYFDLHKEELALTCFNKVLEKEPFNVNANYMSAQSMLALSNFAGAAAGFKKVIELQPA 428

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
           NK          L +++    ++  A T F K LE+ PD  E    +G   +   ++ +A
Sbjct: 429 NKD-----ALIKLARLKKSNANYEEATTLFMKALELSPDMPEITLEIGECLMNARRLPEA 483

Query: 351 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 410
                K    +P++ +A ++L    I    G   +AF     L +   +E  ++    + 
Sbjct: 484 VSYFLKLLSSEPKNVRALLNLAR--IKETLGETNNAFSFYERLYEV--DENNVDARLGMA 539

Query: 411 VIHFEKGEFESAHQSFKDAL---GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 467
            I + +G+ + A   ++ AL    D   L +L++ ++ Y             M+L H  E
Sbjct: 540 KILYSRGQLDKAMFLYQGALKMRPDS--LDILNALSEIY-------------MKLKHEPE 584

Query: 468 NDGNHVEL----PWNKVTVLFNLARL--------------LEQIHDTVAASVLYRL---- 505
             G   E+    P N   +L NLA+L              LE   D  AASV   L    
Sbjct: 585 ALGVFHEILKSEPKNTGAML-NLAKLYRSRAQYGEALKYYLELGFDYEAASVYKELGETA 643

Query: 506 -ILFKYQDYVDA--------------YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
             +  Y   V A              YL+    A+A  +L + IE+     K +  + + 
Sbjct: 644 NAITYYDRAVKADPSNASARVEAGELYLKQKKYAEALKHLNVVIEM-----KPDSFHAHY 698

Query: 551 LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 610
           LS L + E     + +A+  F       DG  S +   L   +Y     N +   + +A 
Sbjct: 699 LSGLVNFE--QGLYERARGEFEQCVK-IDGTSSDSFFYLAESHY-----NVENYAQAKAN 750

Query: 611 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 670
           +L K++ L + +++ H       N  G +  ++  F+ ++  F +V    +G++      
Sbjct: 751 YL-KSQSLSSDILLIH-------NRLGYINFKEHNFEAAESEFKKVIARDAGNIEANYHQ 802

Query: 671 VWINLAHVYF---------------AQGNFA-LAMKMYQ------------NCLRKFYYN 702
             I +AH  +                   FA LA  +Y+            N L+K   N
Sbjct: 803 ALIEIAHAKYNDAIVRLKKISLNRNTSDTFAKLAEALYKSEHYEQALEEAANALKKDPNN 862

Query: 703 TDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGV 747
           TDA   L LA+   E ++++D + S +R   + P  Y  +F+ G+
Sbjct: 863 TDAHYYLGLAQK--ELKRYRDAEASFMRCCEINPKYYRAQFELGI 905



 Score = 40.0 bits (92), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 106/278 (38%), Gaps = 49/278 (17%)

Query: 100  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            E A S FK V+  D  N+ A   QA +E    +Y+D++   K+      +     +L   
Sbjct: 779  EAAESEFKKVIARDAGNIEANYHQALIEIAHAKYNDAIVRLKKISLNRNTSDTFAKLAEA 838

Query: 160  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
            L  YK     +A +    AL+ DP N +A   L    L   E    R       R  EI 
Sbjct: 839  L--YKSEHYEQALEEAANALKKDPNNTDAHYYLG---LAQKELKRYRDAEASFMRCCEIN 893

Query: 220  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
            P             ++  Q                         + L   Y+ +G   +A
Sbjct: 894  PK------------YYRAQ-------------------------FELGIIYNEEGKVLEA 916

Query: 280  GLYYMA---SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
               + +   ++ E + P EF   YY   QV  ++GD    +  F + + + P     L  
Sbjct: 917  KTIFDSIEQNITEADMP-EF---YYNKAQVLTRVGDIEGGIKMFYQAIGLAPKFDRALWE 972

Query: 337  LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            LG+  ++ G+ ++A +   +  ++D +++Q   +LG L
Sbjct: 973  LGYALIKAGRSDEAIKTFERLLELDNKNSQILYELGSL 1010


>gi|356534448|ref|XP_003535766.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY-like [Glycine
           max]
          Length = 929

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 185/432 (42%), Gaps = 68/432 (15%)

Query: 55  ETKQREK----EEHFILATQYYNKASRIDMHEPST-WVGKGQLLLA-----KGEVEQASS 104
           E   REK    E  F++ ++     S  D    ST + GK  +L A     + +   A +
Sbjct: 9   ENNGREKKMVGENGFLIVSEPSPAGSGGDGVSVSTRYEGKDDVLFANILRSRNKFVDALA 68

Query: 105 AFKIVLEADRDNVPALLGQA-CVEF-NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 162
            ++ VLE+D  NV AL+G+  C++  N GR   + E +  A+++ P    A+    G+  
Sbjct: 69  LYERVLESDGGNVEALVGKGICLQMQNMGRL--AFESFAEAIRMDPQNACALT-HCGILY 125

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQAN--EAAGIRKGMEKMQRAFEI 218
              G L +A +++Q+ALQ+DP    A   LA++  D+  N   A   ++G++K   A +I
Sbjct: 126 KDEGCLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFEALKI 185

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
            P+ A A   L   +    Q+ +     E A    +  P  + +Y N+   Y ++GD E 
Sbjct: 186 DPHYAPAYYNLGVVYSEMMQYDMALTFYEKA---ASERPMYAEAYCNMGVIYKNRGDLEA 242

Query: 279 AGLYY----------------MA--------SVK---EINKPHEFI-------FPY---- 300
           A   Y                MA         VK   +IN+   F        + Y    
Sbjct: 243 AITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINRGVAFYKKALHYNWHYADAM 302

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y LG    ++  F  A+  +E      P   E    LG IY     ++KA E  + A  I
Sbjct: 303 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALGI 362

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGE 418
            P  +Q+  +LG   +       +DA   A ++++KA    P   E  NN+GV++ + G+
Sbjct: 363 KPNFSQSLNNLG---VVYTVQGKMDA---AASMIEKAIIANPTYAEAYNNLGVLYRDAGD 416

Query: 419 FESAHQSFKDAL 430
              A  +++  L
Sbjct: 417 ISLAINAYEQCL 428



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 33/262 (12%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK----AQELLRK---AAKIDPR 363
           G    A  +++K L++ P      + L  +   +G   K     QE ++K   A KIDP 
Sbjct: 129 GCLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFEALKIDPH 188

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFES 421
            A A+ +LG +       + +  +  A T  +KA  E P+  E   N+GVI+  +G+ E+
Sbjct: 189 YAPAYYNLGVVY------SEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRGDLEA 242

Query: 422 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH--------V 473
           A   ++  L          + +  + I  +   +   D+    + E D N         +
Sbjct: 243 AITCYERCL----------AVSPNFEIAKNNMAIALTDLGTKVKLEGDINRGVAFYKKAL 292

Query: 474 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
              W+    ++NL     ++     A V Y L         +A   L  I K R+NL  +
Sbjct: 293 HYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKA 352

Query: 534 IELVNEALKVNGKYPNALSMLG 555
           +E    AL +   +  +L+ LG
Sbjct: 353 VECYQLALGIKPNFSQSLNNLG 374


>gi|356500631|ref|XP_003519135.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY-like [Glycine
           max]
 gi|401721241|gb|AFP99901.1| putative UDP-N-acetylglucosamin [Glycine max]
          Length = 928

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 166/390 (42%), Gaps = 58/390 (14%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA-CVEF-NRGRYSDSLEFYKRAL 144
           V    +L ++ +   A + ++ VLE+D  NV AL+G+  C++  N GR   + E +  A+
Sbjct: 50  VSYANILRSRNKFVDALALYERVLESDGGNVEALIGKGICLQMQNMGRL--AFESFAEAI 107

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQANE- 201
           ++ P    A+    G+     G+L +A +++Q+ALQ+DP    A   LA++  D+  N  
Sbjct: 108 RLDPQNACALT-HCGILYKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIK 166

Query: 202 -AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
            A   ++G++K   A +I P+ A A   L   +    Q+ +     E A    +  P  +
Sbjct: 167 LAGNTQEGIQKYFEALKIDPHYAPAYYNLGVVYSEMMQYDMALTFYEKA---ASERPMYA 223

Query: 261 HSYYNLARSYHSKGDYEKAGLYY-----MASVKEINK--------------------PHE 295
            +Y N+   Y ++GD E A   Y     ++   EI K                     H 
Sbjct: 224 EAYCNMGVIYKNRGDLEAAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDIDHG 283

Query: 296 FIF-------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
             F               Y LG    ++  F  A+  +E      P   E    LG IY 
Sbjct: 284 VAFYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK 343

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 402
               ++KA E  + A  I P  +Q+  +LG   +       +DA   A ++++KA    P
Sbjct: 344 DRDNLDKAVECYQLALGIKPNFSQSLNNLG---VVYTVQGKMDA---AASMIEKAIIANP 397

Query: 403 I--EVLNNIGVIHFEKGEFESAHQSFKDAL 430
              E  NN+GV++ + G+   A  +++  L
Sbjct: 398 TYAEAYNNLGVLYRDAGDIALAINAYEQCL 427



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 33/262 (12%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK----AQELLRK---AAKIDPR 363
           G    A  +++K L++ P      + L  +   +G   K     QE ++K   A KIDP 
Sbjct: 128 GRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFEALKIDPH 187

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFES 421
            A A+ +LG +       + +  +  A T  +KA  E P+  E   N+GVI+  +G+ E+
Sbjct: 188 YAPAYYNLGVVY------SEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRGDLEA 241

Query: 422 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH--------V 473
           A   ++  L          + +  + I  +   +   D+    + E D +H        +
Sbjct: 242 AITCYERCL----------AVSPNFEIAKNNMAIALTDLGTKVKLEGDIDHGVAFYKKAL 291

Query: 474 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
              W+    ++NL     ++     A V Y L         +A   L  I K R+NL  +
Sbjct: 292 YYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKA 351

Query: 534 IELVNEALKVNGKYPNALSMLG 555
           +E    AL +   +  +L+ LG
Sbjct: 352 VECYQLALGIKPNFSQSLNNLG 373


>gi|452821408|gb|EME28439.1| hypothetical protein Gasu_41290 [Galdieria sulphuraria]
          Length = 677

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 145/335 (43%), Gaps = 15/335 (4%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQAC 125
           A + YN A R   + P+     G +LL KG++EQA    +  + L  +     +LLG   
Sbjct: 80  AMEAYNNALRFSSNTPTPLCKLGSILLRKGQLEQALIYIQQALALSGNSGEAWSLLGYYY 139

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           ++   G Y  + E ++ A+++      A +  GIGL     G    A +A+Q AL+L P 
Sbjct: 140 LK--TGAYEQAYEAFQSAIRLLGDQASAFLWYGIGLLYELNGSTDYALEAYQNALKLKPY 197

Query: 185 NVEAL-VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG--QHFL 241
           + + + + L +  +   E   +    E + +AF            L   FF  G  Q   
Sbjct: 198 SEQTIDIYLHIAHIYE-EREALDVASEYLNKAFLHVSTFNFNTTILGEIFFRMGAIQELK 256

Query: 242 --VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
             V    E  L      P  + S   L    H +G  E  G   +    E + P++    
Sbjct: 257 RNVTMAKEFYLKALKESPNHAKSLQQLGWIEHEEGRSED-GFQLLKRAVEAD-PNDGQ-G 313

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y LG++ +   ++RSA  N++  +     N     ++G +Y Q+GQ   A +   +A +
Sbjct: 314 WYLLGRLHMAKKEYRSAYDNYQHAVYCNSRNPRFWCSIGVLYYQMGQHRDAMDAYTRAIR 373

Query: 360 IDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 393
           ++P  ++ + DLG L  S S    ALDA+K A  L
Sbjct: 374 LNPNLSEVWYDLGTLYESFSQYKDALDAYKKALEL 408



 Score = 43.1 bits (100), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
           P   LG + L+ G    AL   ++ L +  ++ E    LG+ Y++ G  E+A E  + A 
Sbjct: 97  PLCKLGSILLRKGQLEQALIYIQQALALSGNSGEAWSLLGYYYLKTGAYEQAYEAFQSAI 156

Query: 359 KIDPRDAQAFIDLGELL---ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 415
           ++    A AF+  G  L   ++  T  AL+A++ A  L  K   E  I++  +I  I+ E
Sbjct: 157 RLLGDQASAFLWYGIGLLYELNGSTDYALEAYQNALKL--KPYSEQTIDIYLHIAHIYEE 214

Query: 416 KGEFESAHQSFKDAL 430
           +   + A +    A 
Sbjct: 215 REALDVASEYLNKAF 229



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 64/128 (50%), Gaps = 2/128 (1%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           +G ++  +GD   A+  +   L    +    L  LG I ++ GQ+E+A   +++A  +  
Sbjct: 67  IGTLRESIGDTTGAMEAYNNALRFSSNTPTPLCKLGSILLRKGQLEQALIYIQQALALSG 126

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
              +A+  LG   +   TGA   A++  ++ ++  G++    +   IG+++   G  + A
Sbjct: 127 NSGEAWSLLGYYYLK--TGAYEQAYEAFQSAIRLLGDQASAFLWYGIGLLYELNGSTDYA 184

Query: 423 HQSFKDAL 430
            +++++AL
Sbjct: 185 LEAYQNAL 192


>gi|428218616|ref|YP_007103081.1| glycosyl transferase family protein [Pseudanabaena sp. PCC 7367]
 gi|427990398|gb|AFY70653.1| glycosyl transferase family 9 [Pseudanabaena sp. PCC 7367]
          Length = 2670

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 143/346 (41%), Gaps = 43/346 (12%)

Query: 53  KIETKQREKEEH-----FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
            +ET+ ++ E H     F  A     K  + + H+P       + L A+G   +A   ++
Sbjct: 2   SVETRLQQAETHIAKQQFAQAIALCRKILKQNPHQPIACYLMARALQAQGRKLEAQQYYQ 61

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             +E+D + V A L      F   R+  ++  Y+R +Q+ P    A    +GL   ++G+
Sbjct: 62  RAVESDANLVDAHLQLGNSLFMEARFGLAIASYERVIQLQPDHKEA-HYYLGLAYRQVGR 120

Query: 168 LGKARQAFQRALQLDPENVEALVAL------------------AVMDLQANEA------A 203
           L +A  +++RA+ ++P+ +E  VAL                  A ++L  N A       
Sbjct: 121 LTEAIASYERAIAINPDRIEIQVALGNAQLSAGQLDQAEQSYRAAIELNPNLAEAHNGLG 180

Query: 204 GIRKGMEKM-------QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           G+    + +       +RA E+ P  A A   L    F   Q  L+E L     A+  H 
Sbjct: 181 GVMSNRDLLDQAASSYERAIELMPNYADAYANLGMTQF--RQKNLLEALANCQQAL-QHN 237

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  + +Y  L        + +  GL      K I     +   Y  LG  Q++ G+  +A
Sbjct: 238 PNHASTYMVLGL---IAAEQDNLGLAIAHYQKAIALNPNYANAYCNLGAAQMRQGEPETA 294

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           + N+ K L I P+  E    LG  + QL Q   A E  ++A +  P
Sbjct: 295 IANYHKALAINPNLAEAYHNLGEAHSQLYQFTTATEFYQRAIQTKP 340



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 17/261 (6%)

Query: 171  ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
            A  A Q+ LQ  P+  +AL  L ++  Q  +     +GM  + RA  I P  A A   L 
Sbjct: 1508 ATIACQQILQQHPDYFDALHLLGIIACQQKQ---FDRGMGYLHRAIAINPEYASAYFNLG 1564

Query: 231  NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
            N +   G         + A+   +  P  + + + L ++  S    E A    +A  +E+
Sbjct: 1565 NAYREGGYLAAAAHYYQGAI---DRQPQNTDARHALGQTLQSLDRIEAA----IACYQEL 1617

Query: 291  NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
             K       Y+ L  +Q + G    A+ N+E  +++ PD       LG++  Q GQ+E A
Sbjct: 1618 IKLQPSSLAYFYLADLQARQGLVNEAIGNYETAIQLQPDFAIAYNNLGNLLRQEGQLEPA 1677

Query: 351  QELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
               L KA ++    A+   ++G+ L  ++    AL  ++ A  +  +  +      L ++
Sbjct: 1678 IANLTKALELRRDLAEIHKNMGQALWQNNQLNEALSHYQQALAIKPEYDD------LLSL 1731

Query: 410  GVIHFEKGEFESAHQSFKDAL 430
            G I   +G+F+ A   F+ A+
Sbjct: 1732 GSICRYRGDFDLAIAYFRQAI 1752



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 66/322 (20%), Positives = 128/322 (39%), Gaps = 62/322 (19%)

Query: 49  TYLGKIETKQREKEEHFILATQY------------YNKASRIDMHEPSTWVGKGQLLLAK 96
           +Y   I+ +   KE H+ L   Y            Y +A  I+       V  G   L+ 
Sbjct: 93  SYERVIQLQPDHKEAHYYLGLAYRQVGRLTEAIASYERAIAINPDRIEIQVALGNAQLSA 152

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+++QA  +++  +E + +   A  G   V  NR     +   Y+RA+++ P+   A   
Sbjct: 153 GQLDQAEQSYRAAIELNPNLAEAHNGLGGVMSNRDLLDQAASSYERAIELMPNYADAYA- 211

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G+ +++   L +A    Q+ALQ +P +    + L ++   A E   +   +   Q+A 
Sbjct: 212 NLGMTQFRQKNLLEALANCQQALQHNPNHASTYMVLGLI---AAEQDNLGLAIAHYQKAI 268

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHS 272
            + P      NY AN +   G   + +   ETA+A  +      P  + +Y+NL  ++  
Sbjct: 269 ALNP------NY-ANAYCNLGAAQMRQGEPETAIANYHKALAINPNLAEAYHNLGEAHSQ 321

Query: 273 KGDYEKAGLYYMASVKEINKPH---------------------------------EFIFP 299
              +  A  +Y  +++   KP+                                 +++  
Sbjct: 322 LYQFTTATEFYQRAIQ--TKPNYVSAHNALATVYLKQAQPDQAIAAYRQAIALQPDYVNA 379

Query: 300 YYGLGQVQLKLGDFRSALTNFE 321
           ++GL    L+LG+F   L  +E
Sbjct: 380 HFGLSMALLQLGNFTEGLVEYE 401



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 87   VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
            V  GQ+    GE EQA   ++ VL  + ++  AL     +   +G+ + ++++Y+RA+ +
Sbjct: 1010 VALGQI----GEQEQAIEQYQRVLNQNPNHAQALNHLGVIHKQQGQLAQAIDYYERAIAI 1065

Query: 147  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD-LQANEAAGI 205
             P    A+   +GL     G+   A +  QRA+ L+   V+A V + V+  LQ + AA I
Sbjct: 1066 QPDYVEAL-YHLGLALTAQGKWTAAIEQHQRAIALNHSFVQAYVCVGVLKRLQGDLAAAI 1124

Query: 206  RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
                +  +RA E+ P  A A   L   F  +G +
Sbjct: 1125 ----DYQRRAIELKPNYAEAHQNLGIAFLLSGDY 1154



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 8/133 (6%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y LG    ++G    A+ ++E+ + I PD  E   ALG+  +  GQ+++A++  R A +
Sbjct: 108 HYYLGLAYRQVGRLTEAIASYERAIAINPDRIEIQVALGNAQLSAGQLDQAEQSYRAAIE 167

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 417
           ++P  A+A   LG ++ + D          A +  ++A E +P   +   N+G+  F + 
Sbjct: 168 LNPNLAEAHNGLGGVMSNRDL------LDQAASSYERAIELMPNYADAYANLGMTQFRQK 221

Query: 418 EFESAHQSFKDAL 430
               A  + + AL
Sbjct: 222 NLLEALANCQQAL 234



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 121/311 (38%), Gaps = 54/311 (17%)

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
           +    P +  + Y +AR+  ++G   +A  YY  +V+        +  +  LG       
Sbjct: 29  ILKQNPHQPIACYLMARALQAQGRKLEAQQYYQRAVE---SDANLVDAHLQLGNSLFMEA 85

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
            F  A+ ++E+V+++ PD+ E    LG  Y Q+G++ +A     +A  I+P   +  + L
Sbjct: 86  RFGLAIASYERVIQLQPDHKEAHYYLGLAYRQVGRLTEAIASYERAIAINPDRIEIQVAL 145

Query: 372 GELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA 429
           G   +S+           A    + A E  P   E  N +G +   +   + A  S++ A
Sbjct: 146 GNAQLSAGQ------LDQAEQSYRAAIELNPNLAEAHNGLGGVMSNRDLLDQAASSYERA 199

Query: 430 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL 489
                 + L+ +    Y   A+  M QF+   L     N    ++               
Sbjct: 200 ------IELMPNYADAY---ANLGMTQFRQKNLLEALANCQQALQ--------------- 235

Query: 490 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 549
               H+   AS                Y+ L  IA  ++NL L+I    +A+ +N  Y N
Sbjct: 236 ----HNPNHAST---------------YMVLGLIAAEQDNLGLAIAHYQKAIALNPNYAN 276

Query: 550 ALSMLGDLELK 560
           A   LG  +++
Sbjct: 277 AYCNLGAAQMR 287


>gi|300867655|ref|ZP_07112302.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
 gi|300334366|emb|CBN57474.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
          Length = 1196

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 151/367 (41%), Gaps = 22/367 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+KA  I   +   W  +G  L   G  E+A +++   +E   D+  A   +    
Sbjct: 581 AITSYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAIASYDKAIEIKHDDHEAWFYRGYAL 640

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GR+ +++  Y + ++  P    A     G     LGQ  +A  ++ + ++  P+  E
Sbjct: 641 GELGRFEEAIASYDKVIEFKPDDYYAWN-NRGWALQNLGQFEEAIASYDKVIEFKPDKHE 699

Query: 188 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A     +A+ +L  NE A     +   ++  E  P    A N         GQ    E+ 
Sbjct: 700 AWYNRGVALFNLGRNEEA-----IASYEKVIEFKPDDYYAWNNRGWALQNLGQ---FEEA 751

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
             +   V    P K  ++YN   +  + G  E+A   Y  ++ EI KP +F   ++  G 
Sbjct: 752 IASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKAI-EI-KP-DFYEAWFTRGI 808

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
           V  KLG F  AL +++K +EI PD+ E     G    +L + ++A     KA +I     
Sbjct: 809 VLFKLGRFEEALASYDKAIEIKPDDHEAWNNRGWALGELRRFKEALTSCDKAIEIKADYH 868

Query: 366 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAH 423
            A+ + G  L +      L  F+ A     KA E  P   E  NN GV     G FE A 
Sbjct: 869 YAWNNRGWALRN------LGRFEEAIASYNKALEIKPDHYEAWNNRGVALQNLGRFEEAL 922

Query: 424 QSFKDAL 430
            S   A+
Sbjct: 923 ASLDKAI 929



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 148/369 (40%), Gaps = 31/369 (8%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+K       +   W  +G  L   G+ E+A +++  V+E   D   A   +    
Sbjct: 649 AIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVAL 708

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           FN GR  +++  Y++ ++  P    A     G     LGQ  +A  ++ + ++  P+  E
Sbjct: 709 FNLGRNEEAIASYEKVIEFKPDDYYAWN-NRGWALQNLGQFEEAIASYDKVIEFKPDKHE 767

Query: 188 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A     +A+ +L  NE A     +   ++A EI P    A       +F  G        
Sbjct: 768 AWYNRGVALFNLGRNEEA-----IASYEKAIEIKPDFYEA-------WFTRGIVLFKLGR 815

Query: 246 TETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            E ALA  +      P    ++ N   +      +++A     +  K I    ++ + + 
Sbjct: 816 FEEALASYDKAIEIKPDDHEAWNNRGWALGELRRFKEA---LTSCDKAIEIKADYHYAWN 872

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             G     LG F  A+ ++ K LEI PD+ E     G     LG+ E+A   L KA +I 
Sbjct: 873 NRGWALRNLGRFEEAIASYNKALEIKPDHYEAWNNRGVALQNLGRFEEALASLDKAIEIK 932

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP---IEVLNNIGVIHFEKGE 418
           P D   + + G  LI       L+ ++ A   L KA E  P       N I V+H  K  
Sbjct: 933 PDDHYTWCNRGATLIK------LNCYEEALISLDKAIEIDPNYTSAWYNQILVLHKLKRY 986

Query: 419 FESAHQSFK 427
            ESA   +K
Sbjct: 987 EESAKSFYK 995



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 148/372 (39%), Gaps = 40/372 (10%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y+K   I       W  +G  L   G  E+A +++   +E   D+  A   +     + G
Sbjct: 551 YDKTIEIKPDHQEAWFNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLG 610

Query: 132 RYSDSLEFYKRALQV-HPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVE 187
           R+ +++  Y +A+++ H         G     Y LG+LG+  +A   + + ++  P++  
Sbjct: 611 RFEEAIASYDKAIEIKHDDHEAWFYRG-----YALGELGRFEEAIASYDKVIEFKPDDYY 665

Query: 188 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A      A+ +L   E A     +    +  E  P    A        F  G++   E+ 
Sbjct: 666 AWNNRGWALQNLGQFEEA-----IASYDKVIEFKPDKHEAWYNRGVALFNLGRN---EEA 717

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
             +   V    P   +++ N   +  + G +E+A   Y   ++     HE    +Y  G 
Sbjct: 718 IASYEKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHE---AWYNRGV 774

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
               LG    A+ ++EK +EI PD  E     G +  +LG+ E+A     KA +I P D 
Sbjct: 775 ALFNLGRNEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDH 834

Query: 366 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV-------LNNIGVIHFEKGE 418
           +A+ + G  L        L  FK A T   KA     IE+        NN G      G 
Sbjct: 835 EAWNNRGWAL------GELRRFKEALTSCDKA-----IEIKADYHYAWNNRGWALRNLGR 883

Query: 419 FESAHQSFKDAL 430
           FE A  S+  AL
Sbjct: 884 FEEAIASYNKAL 895


>gi|409993894|ref|ZP_11277020.1| hypothetical protein APPUASWS_22318 [Arthrospira platensis str.
           Paraca]
 gi|291569299|dbj|BAI91571.1| TPR domain protein [Arthrospira platensis NIES-39]
 gi|409935242|gb|EKN76780.1| hypothetical protein APPUASWS_22318 [Arthrospira platensis str.
           Paraca]
          Length = 530

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 150/338 (44%), Gaps = 41/338 (12%)

Query: 72  YNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADR------DNVPALLGQ 123
           YN+A  I     S W     G+ L  +G++++A +A++   E +       DN+  LL Q
Sbjct: 25  YNQA--IAESPQSAWYYHNLGEALSQQGKIDEAIAAYRQATELNPNSAWSYDNLGTLLNQ 82

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
                 +G   +++  +++A+++ P         + L   K G+L +A    Q+A++L  
Sbjct: 83  ------QGNLPEAVSCFRKAIELDPDF-SEFYHNLALVLIKEGRLEEAVSLLQKAIELKA 135

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           ++ E   +L     Q  + +   + +   ++  E+ PY        ++ +   GQ   +E
Sbjct: 136 DDAELYHSLGKAYQQQQQYS---EAVTAYRQGLELNPY-------WSDCYLSLGQ--TLE 183

Query: 244 QLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEK-AGLYYMASVKEINKPHEF 296
            L ET  A+ ++       P+ S +   L     S+G +E+ A LY    + + N     
Sbjct: 184 ALGETEEAIASYRRSYELNPSLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSH 243

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
            +     G      G    A  +++K LE+ P+  E L+ LG +  QL Q E A ++ +K
Sbjct: 244 KYQ----GTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAVDIFQK 299

Query: 357 AAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 393
           A ++DP  A  +  LG+ L   D    AL A+K A  L
Sbjct: 300 ATQVDPNSASFYHQLGQALAKCDRLLEALAAYKRASEL 337



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 146/330 (44%), Gaps = 16/330 (4%)

Query: 47  YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 106
           YY  LG+  ++Q + +E    A   Y +A+ ++ +   ++   G LL  +G + +A S F
Sbjct: 38  YYHNLGEALSQQGKIDE----AIAAYRQATELNPNSAWSYDNLGTLLNQQGNLPEAVSCF 93

Query: 107 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
           +  +E D D        A V    GR  +++   ++A+++       +   +G    +  
Sbjct: 94  RKAIELDPDFSEFYHNLALVLIKEGRLEEAVSLLQKAIELKAD-DAELYHSLGKAYQQQQ 152

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMA 225
           Q  +A  A+++ L+L+P   +  ++L     Q  EA G   + +   +R++E+ P  + A
Sbjct: 153 QYSEAVTAYRQGLELNPYWSDCYLSLG----QTLEALGETEEAIASYRRSYELNPSLSEA 208

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
           L  L       G+   +  L      V  +  T SH Y   A +  + G   +A   Y  
Sbjct: 209 LPKLQTVLESQGRWEELATLYRRCCIVDPNSAT-SHKYQGTALA--NSGKLSEAAESYQK 265

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
           +++      E + P   LGQV  +L  + +A+  F+K  ++ P++      LG    +  
Sbjct: 266 ALELDPNLVEILQP---LGQVLTQLNQWEAAVDIFQKATQVDPNSASFYHQLGQALAKCD 322

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           ++ +A    ++A+++ P       DLG+ L
Sbjct: 323 RLLEALAAYKRASELHPTSTPVLFDLGQAL 352



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 146/362 (40%), Gaps = 45/362 (12%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LGK   +Q++  E    A   Y +   ++ +    ++  GQ L A GE E+A ++++
Sbjct: 141 YHSLGKAYQQQQQYSE----AVTAYRQGLELNPYWSDCYLSLGQTLEALGETEEAIASYR 196

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
              E +     AL     V  ++GR+ +    Y+R   V P+   + +   G      G+
Sbjct: 197 RSYELNPSLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSHKYQ-GTALANSGK 255

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
           L +A +++Q+AL+LDP  VE L  L  +  Q N+       ++  Q+A ++ P  A   +
Sbjct: 256 LSEAAESYQKALELDPNLVEILQPLGQVLTQLNQ---WEAAVDIFQKATQVDPNSASFYH 312

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS----YH---SKGDYEKAG 280
            L        +  L+E L     A   H PT +   ++L ++    YH   +   Y+KA 
Sbjct: 313 QLGQALAKCDR--LLEALAAYKRASELH-PTSTPVLFDLGQALTKLYHWSEAIATYQKAL 369

Query: 281 LYYMASVKEI---------------------NKPHEFIFP-----YYGLGQVQLKLGDFR 314
                +  EI                     +  HEF  P     Y    Q     G   
Sbjct: 370 YLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSDSHEF-HPNSSESYEKFAQFLRSKGKIE 428

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+  F +   + P +      LG+   +  + ++A    +KAA+++P        LGE 
Sbjct: 429 DAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAILAYQKAAELNPYSPHVQYHLGEA 488

Query: 375 LI 376
           L+
Sbjct: 489 LV 490


>gi|428319183|ref|YP_007117065.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428242863|gb|AFZ08649.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 565

 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 118/294 (40%), Gaps = 52/294 (17%)

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
           + D HE   W  +G  L   G +E+A ++F   LE   D   A   +       GR  ++
Sbjct: 266 KADYHE--AWNNRGNALGNLGRLEEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEA 323

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAV 194
           L  Y +AL++ P        GI L   KLG+  +A  +F +AL++ P+  EA     +A+
Sbjct: 324 LASYDKALEIKPDDEAWYNRGIALG--KLGRWEEALASFDKALEIKPDKDEAWYNRGIAL 381

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
            DL   E A     +    +A EI P  A                           A  N
Sbjct: 382 DDLGRWEEA-----IASYDKALEIIPDDA---------------------------AWNN 409

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
            G        NL R   +   Y+KA         EI KP  +   +Y  G   + LG   
Sbjct: 410 RGIALG----NLGRLEEAIASYDKA--------LEI-KPDSYE-SWYNRGSAMINLGRLE 455

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
            A+ +++K LEI PD+       G+    LG+ E+A     KA +I P D +AF
Sbjct: 456 EAIASYDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIASYNKALEIIPDDDEAF 509



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 122/298 (40%), Gaps = 52/298 (17%)

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
           + D HE   W  +G  L   G +E+A ++F   LE   D   A   +     N GR  ++
Sbjct: 232 KADYHE--AWNNRGNALGNLGRLEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEA 289

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAV 194
           +  + +AL+       A     G+   KLG+L +A  ++ +AL++ P++ EA     +A+
Sbjct: 290 IASFDKALEFKADYHQAWN-NRGITLGKLGRLEEALASYDKALEIKPDD-EAWYNRGIAL 347

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
             L   E A     +    +A EI                                    
Sbjct: 348 GKLGRWEEA-----LASFDKALEI------------------------------------ 366

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P K  ++YN   +    G +E+A   Y  +++ I  P +  +   G+    L  G   
Sbjct: 367 -KPDKDEAWYNRGIALDDLGRWEEAIASYDKALEII--PDDAAWNNRGIALGNL--GRLE 421

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
            A+ +++K LEI PD+ E+    G   + LG++E+A     KA +I P D  A+ + G
Sbjct: 422 EAIASYDKALEIKPDSYESWYNRGSAMINLGRLEEAIASYDKALEIKPDDDAAWYNRG 479



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 157/392 (40%), Gaps = 40/392 (10%)

Query: 68  ATQYYNKA--SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A   Y+KA   + D HE   W  +G  L   G  E+A ++F   LE   D+  A   +  
Sbjct: 51  AIASYDKALEFKPDYHE--AWNNRGNALGNLGRWEEAIASFDKALEFKPDDDVAWYNRGI 108

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
              N GR+ + +  Y + L++ P    A     G+  + LG L +A  ++ +AL+  P+ 
Sbjct: 109 GLGNLGRWEEGIASYNKTLEIKPDYHKAW-YNRGIALHNLGLLEEAIASYDKALEFKPDY 167

Query: 186 VEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL-----ANHFFFT 236
            EA      AL  +       A   K +E      E +    + L  L     A   F  
Sbjct: 168 HEAWNNRGNALGNLGRWEEAIASYEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIASFDK 227

Query: 237 GQHFLV---EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA------GLYYMASV 287
              F     E       A+ N G  +  +  +  ++   K DY +A       L  +  +
Sbjct: 228 ALEFKADYHEAWNNRGNALGNLGRLE-EAIASFDKALEFKADYHEAWNNRGNALGNLGRL 286

Query: 288 KE----INKPHEFIFPYY----GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
           +E     +K  EF   Y+      G    KLG    AL +++K LEI PD+ E     G 
Sbjct: 287 EEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEALASYDKALEIKPDD-EAWYNRGI 345

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 399
              +LG+ E+A     KA +I P   +A+ + G   I+ D    L  ++ A     KA E
Sbjct: 346 ALGKLGRWEEALASFDKALEIKPDKDEAWYNRG---IALDD---LGRWEEAIASYDKALE 399

Query: 400 EVPIE-VLNNIGVIHFEKGEFESAHQSFKDAL 430
            +P +   NN G+     G  E A  S+  AL
Sbjct: 400 IIPDDAAWNNRGIALGNLGRLEEAIASYDKAL 431



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 82  EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 141
           EP     +G  L   G  E+A +++   LE   D   A   +     N GR+ +++  + 
Sbjct: 31  EPQACYDRGVALGNSGRWEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIASFD 90

Query: 142 RALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMD 196
           +AL+  P    A    GIGL    LG+  +   ++ + L++ P+  +A     +AL  + 
Sbjct: 91  KALEFKPDDDVAWYNRGIGLG--NLGRWEEGIASYNKTLEIKPDYHKAWYNRGIALHNLG 148

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           L       + + +    +A E  P    A N   N     G+    E+   +   V    
Sbjct: 149 L-------LEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRW---EEAIASYEKVLEFK 198

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY----GLGQVQLKLGD 312
           P    ++ N   +  + G +E+A       +   +K  EF   Y+      G     LG 
Sbjct: 199 PDYHEAWNNRGITLGNLGRWEEA-------IASFDKALEFKADYHEAWNNRGNALGNLGR 251

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
              A+ +F+K LE   D  E     G+    LG++E+A     KA +      QA+ + G
Sbjct: 252 LEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHQAWNNRG 311

Query: 373 ELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             L        L   + A     KA E  P  E   N G+   + G +E A  SF  AL
Sbjct: 312 ITL------GKLGRLEEALASYDKALEIKPDDEAWYNRGIALGKLGRWEEALASFDKAL 364



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 14/147 (9%)

Query: 39  AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE 98
           A  N  G+    LG++E            A   Y+KA  I      +W  +G  ++  G 
Sbjct: 405 AAWNNRGIALGNLGRLEE-----------AIASYDKALEIKPDSYESWYNRGSAMINLGR 453

Query: 99  VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
           +E+A +++   LE   D+  A   +     N GR+ +++  Y +AL++ P    A     
Sbjct: 454 LEEAIASYDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIASYNKALEIIPDDDEAFY--N 511

Query: 159 GLCRYKL-GQLGKARQAFQRALQLDPE 184
             C Y L  Q  +A    Q+A+ L+P+
Sbjct: 512 KACCYALQSQSDQAIHNLQQAINLNPD 538


>gi|196006385|ref|XP_002113059.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens]
 gi|190585100|gb|EDV25169.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens]
          Length = 996

 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 16/299 (5%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA  +D      ++  G +L      ++AS
Sbjct: 169 FAVAWSNLGCVFNSQGE----IWLAIHHFEKAVTLDNGFLDAYINLGNVLKEARIFDRAS 224

Query: 104 SAFKIVLEADRDNVPALLGQ-ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 162
           +A+   L    +N P +LG  ACV + +G    +++ YKRA+++ P+ P A    +    
Sbjct: 225 TAYLRALNLSPNN-PTVLGNLACVYYEQGLMDLAVDTYKRAIELQPNFPDAY-CNLANAL 282

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
            +LG++ +A + +  AL L P + ++L  LA +     E   I +  +  ++A EI+P  
Sbjct: 283 KELGKVTEAEECYNTALSLCPTHADSLNNLANIK---REKGQIGEASKLYRKALEIFPEF 339

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
           A A + LA+      Q  L E L     A+  + P+ + +Y N+  +     D + A   
Sbjct: 340 AAAHSNLAS--VLQQQGKLQEALAHYKEAIRIN-PSFADAYSNMGNTLKEMQDVQGAIQC 396

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
           Y  ++ +IN    F   +  L  +    G    A+ N+   L++ PD  +    L H Y
Sbjct: 397 YTRAI-QINP--NFADAHSNLASIHKDSGSIPEAIANYRTALKLKPDFPDAFCNLAHCY 452



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 167/401 (41%), Gaps = 28/401 (6%)

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
           QL +A + ++ AL+L P+ ++  + LA   + A +  G  K       A +  P      
Sbjct: 83  QLKEALENYRYALRLRPDFIDGYINLASALVAAQDLEGAVKAYAT---ALQYNPNLYCVR 139

Query: 227 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
           N L N     G+   +E+     L      P  + ++ NL   ++S+G+   A  ++  +
Sbjct: 140 NDLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNSQGEIWLAIHHFEKA 196

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
           V   N    F+  Y  LG V  +   F  A T + + L + P+N   L  L  +Y + G 
Sbjct: 197 VTLDNG---FLDAYINLGNVLKEARIFDRASTAYLRALNLSPNNPTVLGNLACVYYEQGL 253

Query: 347 IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA---FKTARTLLKKAGEEVPI 403
           ++ A +  ++A ++ P    A+ +L   L   + G   +A   + TA +L     +    
Sbjct: 254 MDLAVDTYKRAIELQPNFPDAYCNLANAL--KELGKVTEAEECYNTALSLCPTHADS--- 308

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
             LNN+  I  EKG+   A + ++ AL   I+     + +        AS+LQ +  +L 
Sbjct: 309 --LNNLANIKREKGQIGEASKLYRKALE--IFPEFAAAHSNL------ASVLQ-QQGKLQ 357

Query: 464 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 523
               +    + +  +      N+   L+++ D   A   Y   +    ++ DA+  LA+I
Sbjct: 358 EALAHYKEAIRINPSFADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPNFADAHSNLASI 417

Query: 524 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
            K   ++  +I     ALK+   +P+A   L        DW
Sbjct: 418 HKDSGSIPEAIANYRTALKLKPDFPDAFCNLAHCYQIICDW 458



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 134/343 (39%), Gaps = 52/343 (15%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G LL A G +E+A + +   +E   +   A     CV  ++G    ++  +++A+ +   
Sbjct: 143 GNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDNG 202

Query: 150 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
              A I LG  L   ++    +A  A+ RAL L P N   L  LA +     E   +   
Sbjct: 203 FLDAYINLGNVLKEARI--FDRASTAYLRALNLSPNNPTVLGNLACVYY---EQGLMDLA 257

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
           ++  +RA E+ P    A   LAN     G+    E+   TAL++    PT + S  NLA 
Sbjct: 258 VDTYKRAIELQPNFPDAYCNLANALKELGKVTEAEECYNTALSLC---PTHADSLNNLAN 314

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
               KG   +A   Y                                      K LEI+P
Sbjct: 315 IKREKGQIGEASKLY-------------------------------------RKALEIFP 337

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAF 387
           +       L  +  Q G++++A    ++A +I+P  A A+ ++G  L    D   A+  +
Sbjct: 338 EFAAAHSNLASVLQQQGKLQEALAHYKEAIRINPSFADAYSNMGNTLKEMQDVQGAIQCY 397

Query: 388 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             A  +          +  +N+  IH + G    A  +++ AL
Sbjct: 398 TRAIQINPNFA-----DAHSNLASIHKDSGSIPEAIANYRTAL 435



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 22/246 (8%)

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
           +++ Y  ALQ +P+    +R  +G     LG+L +A+  + +A++  P      VA + +
Sbjct: 121 AVKAYATALQYNPNL-YCVRNDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNL 176

Query: 196 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF----LVEQLTETALA 251
               N    I   +   ++A  +        N   + +   G       + ++ +   L 
Sbjct: 177 GCVFNSQGEIWLAIHHFEKAVTLD-------NGFLDAYINLGNVLKEARIFDRASTAYLR 229

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQLK 309
             N  P       NLA  Y+ +G  + A   Y  +++   +P+   FP  Y  L     +
Sbjct: 230 ALNLSPNNPTVLGNLACVYYEQGLMDLAVDTYKRAIEL--QPN---FPDAYCNLANALKE 284

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           LG    A   +   L + P + ++L  L +I  + GQI +A +L RKA +I P  A A  
Sbjct: 285 LGKVTEAEECYNTALSLCPTHADSLNNLANIKREKGQIGEASKLYRKALEIFPEFAAAHS 344

Query: 370 DLGELL 375
           +L  +L
Sbjct: 345 NLASVL 350


>gi|118365798|ref|XP_001016118.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89297885|gb|EAR95873.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 963

 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 159/370 (42%), Gaps = 62/370 (16%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL---GQA 124
           A QY  KAS+    E + ++  G + L   +++QA   F   +E+D  N   L     Q 
Sbjct: 625 AEQYLLKASQAQGQEQNIYLFLGSIFLKHNKMKQAEYYFLKTIESDPTNFQYLFQIGDQY 684

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ-RALQLDP 183
           C   N  ++ ++  +Y++AL + PS    I   I +  YK+    +  Q F    L+ +P
Sbjct: 685 C---NFEKFEEARFYYQKALNLKPSSEEIILKLISV--YKMCSSTQEIQQFLFEFLEKNP 739

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           EN  A   +           G  + + K   A                      Q++L  
Sbjct: 740 ENQYAFTLIG----------GYYENIGKFTEA---------------------KQYYL-- 766

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYG 302
                AL +    P    +  +L ++Y + G+ E A  Y+   +K +I+K  E+I     
Sbjct: 767 ----QALQI---NPDNFITICHLIQNYITTGEIENAKSYFEKLLKLKISKDEEYI----S 815

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           +G  Q++      ++ +F K LEI P N +    L   Y+Q+G+ E+A++   KA K+ P
Sbjct: 816 IGTFQVQFQMIEESIQSFLKALEINPQNSQAHYKLAKSYMQIGRNEEAKKSYFKAFKMYP 875

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV--IHFEKGEFE 420
              QA  D+G+   +S+    ++A K  + +L       P E+  +I +  I+ E  + E
Sbjct: 876 ESEQALQDVGD---NSNNNIPVEAQKYFKKVLSMNN---PRELNCDIKLAYIYLELNQLE 929

Query: 421 SAHQSFKDAL 430
            A   F+ AL
Sbjct: 930 DAKSYFQQAL 939



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 94/423 (22%), Positives = 167/423 (39%), Gaps = 66/423 (15%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LG +Y  +GKIE            A Q++ KA  I   + S       LL    + +Q  
Sbjct: 183 LGQFYKKIGKIEE-----------AAQFFQKADEIQPFQDSELNYNIGLLFY--QTKQFQ 229

Query: 104 SAFKIVLEADRD-----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
            + K +L+         N   +LGQA ++  + + S+    + +AL++ P     +   +
Sbjct: 230 ESIKCLLKYKEKYPQHFNTNYVLGQAYLQLKQLKESEIC--FLQALEIQPQ-SADVCFSL 286

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           GL  + L    KA++ F +  + DP+++++   L  +    N+       +   Q+  EI
Sbjct: 287 GLIYFNLKMNEKAQKYFLKVQKTDPKDLDSAFYLGCLYQSDNKQ---EDAIYCFQKVLEI 343

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
            P C  A   L       G+  + ++  + A  +    P    +Y  L   Y   G  ++
Sbjct: 344 IPQCFEANFQLGFSLELIGKVEVAKEYFQKAFEIK---PQSVEAYVQLGIFYLKFGRKDE 400

Query: 279 AGLYYMASVKEINKPHEF-----------IFP---------------YYG---LGQVQLK 309
           A   ++      N P EF           +F                +Y    LG V   
Sbjct: 401 AQQCFIMGFN--NNPKEFESLISENVDSQLFTNLKVQKDLDQVNEKNFYSSLYLGYVYEL 458

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           +G    A  ++ KVLE+ P+       LG +Y+     ++A+  L+KA  IDP +     
Sbjct: 459 IGRLEDAKKHYFKVLELQPNLLNVNLQLGILYMNEKNEKEAESFLKKAYNIDPNNFDTNT 518

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN--IGVIHFEKGEFESAHQSFK 427
            LG   + ++          +   ++KA E  P   L N  +G+ + EKG +E A +  +
Sbjct: 519 QLGLFYLQNNRE------NESNQYIQKAYEIDPDNYLINYQLGIQYNEKGNYEIAKKYSQ 572

Query: 428 DAL 430
            AL
Sbjct: 573 KAL 575



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 148/353 (41%), Gaps = 52/353 (14%)

Query: 58  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 117
           Q   ++ +++  Q Y + + I M         G +  +   +E A + F+  ++ D ++ 
Sbjct: 51  QESAKQKYLIHIQKYPRTTEIHML-------YGLIFQSMKMIEDAKNCFQEAIKIDSNST 103

Query: 118 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF-- 175
            A    A +  +   +S++ +   +AL++  S    +   +G+   K GQL K++  F  
Sbjct: 104 LAYQCLADIYEDSWNFSEAEKHLLKALEI-SSNQIHLNYRLGVLYQKTGQLEKSKTFFLI 162

Query: 176 ----QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY--- 228
               ++AL++  ++ ++ + L        +   I +  +  Q+A EI P+    LNY   
Sbjct: 163 YEGQEKALKMKSQDQQSKIQLGQF---YKKIGKIEEAAQFFQKADEIQPFQDSELNYNIG 219

Query: 229 ----------------------LANHF---FFTGQHFL-VEQLTETALAVTNH---GPTK 259
                                    HF   +  GQ +L ++QL E+ +         P  
Sbjct: 220 LLFYQTKQFQESIKCLLKYKEKYPQHFNTNYVLGQAYLQLKQLKESEICFLQALEIQPQS 279

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           +   ++L   Y +    EKA  Y++   K    P +    +Y LG +         A+  
Sbjct: 280 ADVCFSLGLIYFNLKMNEKAQKYFLKVQK--TDPKDLDSAFY-LGCLYQSDNKQEDAIYC 336

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           F+KVLEI P   E    LG     +G++E A+E  +KA +I P+  +A++ LG
Sbjct: 337 FQKVLEIIPQCFEANFQLGFSLELIGKVEVAKEYFQKAFEIKPQSVEAYVQLG 389



 Score = 46.6 bits (109), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 131/346 (37%), Gaps = 68/346 (19%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  +  KA  ID +   T    G   L      +++   +   E D DN   +  Q  ++
Sbjct: 499 AESFLKKAYNIDPNNFDTNTQLGLFYLQNNRENESNQYIQKAYEIDPDNY-LINYQLGIQ 557

Query: 128 FN-RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF--QRALQLDPE 184
           +N +G Y  + ++ ++AL++ P C  A    I L    L Q  K    F   +A Q++P 
Sbjct: 558 YNEKGNYEIAKKYSQKALEIKPQCEKAY---ILLGDIYLNQNMKKEAEFYLMKAYQINPN 614

Query: 185 NVEALVALAVMD---LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           ++E +  L   +   L+A++A G  +                       N + F G  FL
Sbjct: 615 SLEYVENLEKAEQYLLKASQAQGQEQ-----------------------NIYLFLGSIFL 651

Query: 242 ----VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY-------------- 283
               ++Q     L      PT     + +   Y +   +E+A  YY              
Sbjct: 652 KHNKMKQAEYYFLKTIESDPTNFQYLFQIGDQYCNFEKFEEARFYYQKALNLKPSSEEII 711

Query: 284 ---------MASVKEINK-PHEFI-------FPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
                     +S +EI +   EF+       + +  +G     +G F  A   + + L+I
Sbjct: 712 LKLISVYKMCSSTQEIQQFLFEFLEKNPENQYAFTLIGGYYENIGKFTEAKQYYLQALQI 771

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
            PDN  T+  L   Y+  G+IE A+    K  K+     + +I +G
Sbjct: 772 NPDNFITICHLIQNYITTGEIENAKSYFEKLLKLKISKDEEYISIG 817


>gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
 gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
          Length = 125

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 5/116 (4%)

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSA 316
             + ++YNL  +Y+ +GDY++A  YY  +++ + N    +    Y LG    K GD+  A
Sbjct: 7   NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAW----YNLGNAYYKQGDYDEA 62

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           +  ++K LE+ P+N E    LG+ Y + G  ++A E  +KA ++DP +A+A  +LG
Sbjct: 63  IEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLG 118



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 1/95 (1%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y LG    K GD+  A+  ++K LE+ P+N E    LG+ Y + G  ++A E  +KA +
Sbjct: 12  WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71

Query: 360 IDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
           +DP +A+A+ +LG       D   A++ ++ A  L
Sbjct: 72  LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 106



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
           L N ++  G +    +  + AL +    P  + ++YNL  +Y+ +GDY++A  YY  +++
Sbjct: 15  LGNAYYKQGDYDEAIEYYQKALELD---PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71

Query: 289 -EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
            + N    +    Y LG    K GD+  A+  ++K LE+ P+N E  + LG+
Sbjct: 72  LDPNNAEAW----YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 119



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LG    KQ + +E    A +YY KA  +D +    W   G     +G+ ++A   ++  L
Sbjct: 15  LGNAYYKQGDYDE----AIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKAL 70

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
           E D +N  A        + +G Y +++E+Y++AL++ P+   A +  +G  + K G
Sbjct: 71  ELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA-KQNLGNAKQKQG 125



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 7/105 (6%)

Query: 328 PDN-CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALD 385
           P N  E    LG+ Y + G  ++A E  +KA ++DP +A+A+ +LG       D   A++
Sbjct: 5   PGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIE 64

Query: 386 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            ++ A  L     +    E   N+G  ++++G+++ A + ++ AL
Sbjct: 65  YYQKALEL-----DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKAL 104



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 6/129 (4%)

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 205
           + P         +G   YK G   +A + +Q+AL+LDP N EA   L     +  +    
Sbjct: 3   MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGD---Y 59

Query: 206 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
            + +E  Q+A E+ P  A A   L N ++  G +    +  + AL +    P  + +  N
Sbjct: 60  DEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD---PNNAEAKQN 116

Query: 266 LARSYHSKG 274
           L  +   +G
Sbjct: 117 LGNAKQKQG 125


>gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 942

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 146/357 (40%), Gaps = 80/357 (22%)

Query: 25  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 84
           +I+EY A   + +       G  Y  LG+ E            A   Y+KA +I   + +
Sbjct: 8   DINEYLAQQWFNQ-------GCEYFQLGQFEQ-----------AIASYDKALQIKPDDHN 49

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W  +G  LL  GE E+A ++F+  L+   D+  A L +       G Y +++ F+ +A+
Sbjct: 50  AWYNRGTALLNIGEYEEAIASFEKALQFKPDSYEAWLNRGLALAKLGEYEEAITFFDKAI 109

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEA 202
           Q+ P    A  L  GL   KLG+  +A  ++ +A+Q+ P+  E      L + DL   E 
Sbjct: 110 QIKPDSYEAW-LNRGLALAKLGEYEEAIASYDKAIQIKPDKHETWHNWGLVLDDLGEYEE 168

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
           A     +    +A +  P                                          
Sbjct: 169 A-----IASYDKALQCKP------------------------------------------ 181

Query: 263 YYNLARSYHSKG-------DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
             +L  ++H++G       +YEKA   Y  +++     H+    ++  G+    LG++  
Sbjct: 182 --DLHETWHNRGAALADLREYEKAIASYDKALQFKPDLHKT---WHNRGKALGDLGEYEK 236

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           A+ +++K L+I PD  E   + G +  +LG+ EKA     KA +  P    A+++ G
Sbjct: 237 AIVSYDKALQIKPDKHEAWLSRGLVLAELGEYEKAIASYDKALQFKPDFHDAWLNRG 293



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 48/292 (16%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W  +G      G+ EQA +++   L+   D+  A   +     N G Y +++  +++ALQ
Sbjct: 17  WFNQGCEYFQLGQFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASFEKALQ 76

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAA 203
             P    A  L  GL   KLG+  +A   F +A+Q+ P++ EA +   LA+  L   E A
Sbjct: 77  FKPDSYEAW-LNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEA 135

Query: 204 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
                +    +A +I                                      P K  ++
Sbjct: 136 -----IASYDKAIQI-------------------------------------KPDKHETW 153

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           +N        G+YE+A   Y  +++     HE    ++  G     L ++  A+ +++K 
Sbjct: 154 HNWGLVLDDLGEYEEAIASYDKALQCKPDLHET---WHNRGAALADLREYEKAIASYDKA 210

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           L+  PD  +T    G     LG+ EKA     KA +I P   +A++  G +L
Sbjct: 211 LQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLSRGLVL 262



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 11/173 (6%)

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           +  ++N    Y   G +E+A   Y  +++     H     +Y  G   L +G++  A+ +
Sbjct: 14  AQQWFNQGCEYFQLGQFEQAIASYDKALQIKPDDHN---AWYNRGTALLNIGEYEEAIAS 70

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
           FEK L+  PD+ E     G    +LG+ E+A     KA +I P   +A+++ G  L    
Sbjct: 71  FEKALQFKPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLAL---- 126

Query: 380 TGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             A L  ++ A     KA +  P   E  +N G++  + GE+E A  S+  AL
Sbjct: 127 --AKLGEYEEAIASYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIASYDKAL 177


>gi|196232370|ref|ZP_03131223.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223442|gb|EDY17959.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 779

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 151/356 (42%), Gaps = 31/356 (8%)

Query: 208 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSY 263
           G E +QRA  + P  A A + L N     G+       T+ A+A  +H     P  + ++
Sbjct: 5   GQELLQRAIALNPEDAAAYSNLGNSLAAQGR-------TDEAIAAYDHAILLKPDYTEAH 57

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           YN   +  S+G  E+A   +  ++  + KP E+   YY +G   ++ G    A+  +   
Sbjct: 58  YNRGNALRSQGKLEEALAAFCKAI--VLKP-EYAEAYYNMGITMMECGKLDQAINAYACA 114

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA- 382
           +   PD  E    LG+   + G  E A    R+A +I P  A+AF +LG  L  +   A 
Sbjct: 115 IRYKPDFAEAHNNLGNAEARRGHFESAVAAYRRAIQIRPNYAEAFNNLGTALSKAGQSAE 174

Query: 383 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 442
           A+ A+  A +L      + P E  +N+G+   E+   E A Q+++ AL        L+S 
Sbjct: 175 AITAYLNAISL----KPQFP-EAYHNLGMALAEQRRLEEATQAYRRALE-------LNSN 222

Query: 443 TKTYVIDASASMLQFKDMQLFHRFENDGNH-VELPWNKVTVLFNLARLLEQIHDTVAASV 501
                 +   ++++     LF       NH + L  +      NL   L  ++    A  
Sbjct: 223 APQPWNNLGTTLIE---QGLFTEGATACNHALALDPDFADAQSNLGVALAGLNRFAEAIA 279

Query: 502 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
            +R  L    D    +  L  + + + NL  +++    AL +   +  A++ LG++
Sbjct: 280 AFRSALQLQPDNATVHFNLGNVFRDQRNLDQAVDEYQRALTLEPMFMEAITNLGNV 335



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 132/346 (38%), Gaps = 46/346 (13%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
           +GR  +++  Y  A+ + P    A     G      G+L +A  AF +A+ L PE  EA 
Sbjct: 33  QGRTDEAIAAYDHAILLKPDYTEA-HYNRGNALRSQGKLEEALAAFCKAIVLKPEYAEAY 91

Query: 190 VALAVMDLQANE--------AAGIR-----------------------KGMEKMQRAFEI 218
             + +  ++  +        A  IR                         +   +RA +I
Sbjct: 92  YNMGITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNAEARRGHFESAVAAYRRAIQI 151

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
            P  A A N L       GQ    E +T    A++   P    +Y+NL  +   +   E+
Sbjct: 152 RPNYAEAFNNLGTALSKAGQS--AEAITAYLNAIS-LKPQFPEAYHNLGMALAEQRRLEE 208

Query: 279 AGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           A   Y  +++   N P     P+  LG   ++ G F    T     L + PD  +    L
Sbjct: 209 ATQAYRRALELNSNAPQ----PWNNLGTTLIEQGLFTEGATACNHALALDPDFADAQSNL 264

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS-DTGAALDAFKTARTLLKK 396
           G     L +  +A    R A ++ P +A    +LG +     +   A+D ++ A TL   
Sbjct: 265 GVALAGLNRFAEAIAAFRSALQLQPDNATVHFNLGNVFRDQRNLDQAVDEYQRALTL--- 321

Query: 397 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 442
             E + +E + N+G +  + G+   A   ++  L     +T L S 
Sbjct: 322 --EPMFMEAITNLGNVFRDCGKVNEALAIYRRGLSSNSSVTHLRSN 365



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 22/274 (8%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  ++  G+++QA +A+   +    D   A       E  RG +  ++  Y+RA+Q+ P+
Sbjct: 95  GITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNAEARRGHFESAVAAYRRAIQIRPN 154

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
              A    +G    K GQ  +A  A+  A+ L P+  EA   L    +   E   + +  
Sbjct: 155 YAEAFN-NLGTALSKAGQSAEAITAYLNAISLKPQFPEAYHNLG---MALAEQRRLEEAT 210

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ--LTETALAVTNHG----PTKSHSY 263
           +  +RA E+        N L           L+EQ   TE A A  NH     P  + + 
Sbjct: 211 QAYRRALELNSNAPQPWNNLGTT--------LIEQGLFTEGATAC-NHALALDPDFADAQ 261

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            NL  +      + +A   + ++++   +P      ++ LG V     +   A+  +++ 
Sbjct: 262 SNLGVALAGLNRFAEAIAAFRSALQL--QPDNATV-HFNLGNVFRDQRNLDQAVDEYQRA 318

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           L + P   E +  LG+++   G++ +A  + R+ 
Sbjct: 319 LTLEPMFMEAITNLGNVFRDCGKVNEALAIYRRG 352


>gi|333982415|ref|YP_004511625.1| hypothetical protein [Methylomonas methanica MC09]
 gi|333806456|gb|AEF99125.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylomonas
           methanica MC09]
          Length = 789

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 162/380 (42%), Gaps = 30/380 (7%)

Query: 28  EYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWV 87
           E YA VR + I +   +G ++  LG I  +    +E    + + Y  A R++  + S   
Sbjct: 341 EAYATVR-DAIRVEPGVGDHWRLLGIIADRLNRADE----SAKAYKAALRLNPMDASAKQ 395

Query: 88  GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRA 143
               +L   G+ + A    ++ L  + DN P+  G        E  R  Y+D+ + +++A
Sbjct: 396 ALSNVLARNGKADAA----RLTLGNEIDNNPSSAGTWISIGFTESGRKHYADAEKAFRKA 451

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 203
           +++ P    A  +G+G    +  +L +A QA+ +A    P N   +  +           
Sbjct: 452 IEIAPETSNAW-IGLGAVLTETNRLKEAEQAYDKAYDSKPNNPGVIAEILTNRGNVKSKL 510

Query: 204 G-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
           G  R  +  ++ A +I P    A   L         H  V       +     GP     
Sbjct: 511 GDKRAALADIEAAVKIDPTYINAYRSLGILKVEVRDHRAVVDAFGKVITSDLAGP---DD 567

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEI--NKPHEF--IFPYYGLGQVQLKLGDFRSALT 318
           +  LA S  + GD  KA L  +   +++  N P     +  YYG      + GD + AL 
Sbjct: 568 WATLAESLEAIGD-NKAALEALEKSEKLDPNNPKTLQALTGYYG------RNGDLQKALV 620

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LIS 377
             E+ L+I   +     + G+  ++LG++ +A   L  A  +DP+ A A+I+LGE  + S
Sbjct: 621 YIERALKIDSSSAVNWSSKGYALLKLGRLPEAISTLETATNLDPQFANAWINLGEAQMRS 680

Query: 378 SDTGAALDAFKTARTLLKKA 397
           ++ G A+ + + A +L   A
Sbjct: 681 NNLGKAITSLERAVSLAPTA 700



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 72/342 (21%), Positives = 141/342 (41%), Gaps = 37/342 (10%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           +H+  A + + KA  I     + W+G G +L     +++A  A+    ++  +N P ++ 
Sbjct: 439 KHYADAEKAFRKAIEIAPETSNAWIGLGAVLTETNRLKEAEQAYDKAYDSKPNN-PGVIA 497

Query: 123 QACVEFNRGRYSDSLEFYKRAL-------QVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           +  +  NRG     L   + AL       ++ P+   A R  +G+ + ++        AF
Sbjct: 498 E--ILTNRGNVKSKLGDKRAALADIEAAVKIDPTYINAYR-SLGILKVEVRDHRAVVDAF 554

Query: 176 QRALQLDPENVEALVALAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNYLANHFF 234
            + +  D    +    LA    ++ EA G  K  +E ++++ ++ P     L  L  ++ 
Sbjct: 555 GKVITSDLAGPDDWATLA----ESLEAIGDNKAALEALEKSEKLDPNNPKTLQALTGYYG 610

Query: 235 FTG--QHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
             G  Q  LV    E AL + +       +K ++   L R   +    E A         
Sbjct: 611 RNGDLQKALV--YIERALKIDSSSAVNWSSKGYALLKLGRLPEAISTLETA--------- 659

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
             N   +F   +  LG+ Q++  +   A+T+ E+ + + P   +    L   Y+   Q E
Sbjct: 660 -TNLDPQFANAWINLGEAQMRSNNLGKAITSLERAVSLAPTAPDARLYLAQSYLNSRQAE 718

Query: 349 KAQELLRKAAKIDPRDAQAF--IDLGELLISSDTGAALDAFK 388
           KA+       K  P   QA   + L +L+  +++ AAL  ++
Sbjct: 719 KARTHANALLKAQPELPQALAIVTLADLM-DNNSAAALTNYR 759



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 63/149 (42%), Gaps = 7/149 (4%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD--NVPALLGQAC 125
           A  Y  +A +ID      W  KG  LL  G + +A S  +     D    N    LG+A 
Sbjct: 618 ALVYIERALKIDSSSAVNWSSKGYALLKLGRLPEAISTLETATNLDPQFANAWINLGEAQ 677

Query: 126 VEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           +  N  G+   SLE   RA+ + P+ P A RL +        Q  KAR      L+  PE
Sbjct: 678 MRSNNLGKAITSLE---RAVSLAPTAPDA-RLYLAQSYLNSRQAEKARTHANALLKAQPE 733

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQ 213
             +AL  + + DL  N +A       K+Q
Sbjct: 734 LPQALAIVTLADLMDNNSAAALTNYRKIQ 762


>gi|195430888|ref|XP_002063480.1| GK21381 [Drosophila willistoni]
 gi|194159565|gb|EDW74466.1| GK21381 [Drosophila willistoni]
          Length = 1059

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 109/502 (21%), Positives = 203/502 (40%), Gaps = 38/502 (7%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEV-----EQASSAFKIVLEADRDNVPALLGQACVE 127
           N   +++ H+P +    G L LA  E      E A      +   D  N   LL  + + 
Sbjct: 32  NAVGKLNEHQPQSLSSVGLLELAHREYQAVDYENAEKHCMQLWRQDSTNTGVLLLLSSIH 91

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           F   R   S +F   A++ +P    A    +G    + GQL +A   ++RA++L P+ ++
Sbjct: 92  FQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVFKERGQLQEALDNYRRAVRLKPDFID 150

Query: 188 ALVALAVMDLQANEA-AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
             + LA   + A +  A ++  +  +Q   ++Y  C  +   L N     G+   +E+  
Sbjct: 151 GYINLAAALVAARDMEAAVQAYITALQYNPDLY--CVRS--DLGNLLKALGR---LEEAK 203

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
              L      P  + ++ NL   ++++G+   A  ++    K +     F+  Y  LG V
Sbjct: 204 ACYLKAIETCPNFAVAWSNLGCVFNAQGEIWLAIHHFE---KAVTLDPNFLDAYINLGNV 260

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
             +   F  A+  + + L + P+N      L  +Y + G I+ A +  R+A ++ P    
Sbjct: 261 LKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPD 320

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
           A+ +L   L   + G   +A +   T L+        + LNN+  I  E+G  E A + +
Sbjct: 321 AYCNLANAL--KEKGQVKEAEECYNTALRLCSNHA--DSLNNLANIKREQGYIEEATRLY 376

Query: 427 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH----VELPWNKVTV 482
             AL             + +   A+A       +Q   + ++  NH    + +       
Sbjct: 377 LKAL-------------EVFPDFAAAHSNLASVLQQQGKLKDALNHYKEAIRIQPTFADA 423

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
             N+   L+++ D   A   Y   +     + DA+  LA+I K   N+  +I+    ALK
Sbjct: 424 YSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 483

Query: 543 VNGKYPNALSMLGDLELKNDDW 564
           +   +P+A   L        DW
Sbjct: 484 LKPDFPDAYCNLAHCLQIVCDW 505



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 162/386 (41%), Gaps = 24/386 (6%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 118 YSNLGNVFKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMEAAVQAYI 173

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 174 TALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETCPNFAVAWS-NLGCVFNAQ 230

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 231 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNAVV 287

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L++   +T        P    +Y NLA +   KG  ++A   Y  
Sbjct: 288 HGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEECYNT 344

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
           +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q G
Sbjct: 345 ALRLCSNHADSL---NNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNLASVLQQQG 401

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 404
           +++ A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 402 KLKDALNHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA-----D 456

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDAL 430
             +N+  IH + G    A QS++ AL
Sbjct: 457 AHSNLASIHKDSGNIPEAIQSYRTAL 482



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 132/332 (39%), Gaps = 48/332 (14%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 216 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 271

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    +     
Sbjct: 272 AAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAY-CNLANALK 330

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + GQ+ +A + +  AL+L   + ++L  LA +     E   I +      +A E++P  A
Sbjct: 331 EKGQVKEAEECYNTALRLCSNHADSLNNLANIK---REQGYIEEATRLYLKALEVFPDFA 387

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A                                   HS  NLA     +G  + A  +Y
Sbjct: 388 AA-----------------------------------HS--NLASVLQQQGKLKDALNHY 410

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L  I+  
Sbjct: 411 KEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKD 467

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            G I +A +  R A K+ P    A+ +L   L
Sbjct: 468 SGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 499


>gi|386811837|ref|ZP_10099062.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386404107|dbj|GAB61943.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 311

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 121/254 (47%), Gaps = 14/254 (5%)

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G+A     + R  + +E  K+ L+++P+        +GL   + G L ++  ++++AL+ 
Sbjct: 44  GEAPSVHKKARLDEEIEKNKKLLEINPNDATG-HYNLGLLYEENGMLDESLASYKKALET 102

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           +P  +EAL+    +    N+     + +   ++A ++ P+ A A   L   +   GQ   
Sbjct: 103 NPSMIEALIGQGNI---LNKKGKSDEAISVFKKAVDMSPHHAEAYEGLGLVYVHKGQ--- 156

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            E   +  L   +  P   ++ YNL   Y  K  + +A   +  ++ EIN P + I  YY
Sbjct: 157 AEDAVKAFLRAIDINPGLVNARYNLGILYAKKAQFNEAIAEWTKAI-EIN-PQK-IEVYY 213

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            LG    KLG    A++ ++K L I PD       +G +Y + G  EKA+  L+K  +++
Sbjct: 214 NLGVGYTKLGKMDEAISVWQKALTIRPDMANLHYTIGLVYKEKGDFEKAEASLKKTLEVE 273

Query: 362 PRDAQAFIDLGELL 375
           P     F+++ ++L
Sbjct: 274 PN----FVEVHKVL 283



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 50/264 (18%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G L    G ++++ +++K  LE +   + AL+GQ  +   +G+  +++  +K+A+ + P 
Sbjct: 80  GLLYEENGMLDESLASYKKALETNPSMIEALIGQGNILNKKGKSDEAISVFKKAVDMSPH 139

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM---DLQANEAAGIR 206
              A   G+GL     GQ   A +AF RA+ ++P  V A   L ++     Q NEA    
Sbjct: 140 HAEAYE-GLGLVYVHKGQAEDAVKAFLRAIDINPGLVNARYNLGILYAKKAQFNEA---- 194

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
             + +  +A EI                                      P K   YYNL
Sbjct: 195 --IAEWTKAIEI-------------------------------------NPQKIEVYYNL 215

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
              Y   G  ++A   +    K +    +    +Y +G V  + GDF  A  + +K LE+
Sbjct: 216 GVGYTKLGKMDEAISVWQ---KALTIRPDMANLHYTIGLVYKEKGDFEKAEASLKKTLEV 272

Query: 327 YPDNCETLKALGHIYVQLGQIEKA 350
            P+  E  K L  +Y   G +  A
Sbjct: 273 EPNFVEVHKVLEELYRSKGMLGDA 296



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 41/208 (19%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y KA   +       +G+G +L  KG+ ++A S FK  ++    +  A  G   V  ++G
Sbjct: 96  YKKALETNPSMIEALIGQGNILNKKGKSDEAISVFKKAVDMSPHHAEAYEGLGLVYVHKG 155

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           +  D+++ + RA+ ++P    A R  +G+   K  Q  +A   + +A++++P+ +E    
Sbjct: 156 QAEDAVKAFLRAIDINPGLVNA-RYNLGILYAKKAQFNEAIAEWTKAIEINPQKIEVYYN 214

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
           L V         G  K + KM  A  ++                           + AL 
Sbjct: 215 LGV---------GYTK-LGKMDEAISVW---------------------------QKALT 237

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           +    P  ++ +Y +   Y  KGD+EKA
Sbjct: 238 IR---PDMANLHYTIGLVYKEKGDFEKA 262


>gi|326432559|gb|EGD78129.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818]
          Length = 931

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 155/372 (41%), Gaps = 61/372 (16%)

Query: 99  VEQASSAFKIVLEADRDNVPALLGQ---ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +E  +  F  V +A +D + A   Q   A VE  R R  DS + +             + 
Sbjct: 225 IESWAGGFSAVNQAVKDQLRAWCLQKAVAAVEAMRARGEDSTDAF-----------AGLC 273

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQL----DPENVEALVAL-AVMDLQANEAAGIRKGME 210
           L +G      G+  +A   F+ AL +    + E  E + AL   + L  +      K +E
Sbjct: 274 LNVGAVLSDFGEHDRAIAYFETALPIYLRTEGEKGEGVAALYNNLGLAYDNKGKYDKAIE 333

Query: 211 KMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT-----NHGP 257
             ++A  I        +P  A + N L N +   G++       E ALA+T        P
Sbjct: 334 FYEKALAITVEALGEKHPSTATSYNNLGNAYADKGEYDRAIAYVEKALAITVETVGEKHP 393

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYY----MASVKEINKPHEFIF-PYYGLGQVQLKLGD 312
           + + +Y NL  +Y SKGD++KA  +Y       V+ + + H      Y  LG      GD
Sbjct: 394 STASTYGNLGNAYDSKGDHDKAVHFYEKALAIKVETLGEKHPSTADTYNNLGGAYDSKGD 453

Query: 313 FRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI---- 360
           ++ A+  +EK L I        +P    T   LG+ Y   G+ ++A +   KA  I    
Sbjct: 454 YKKAIQLYEKALAIQVETLGEKHPSTASTYNNLGNAYASKGEYDRAVQQYEKALAIYAEA 513

Query: 361 ----DPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKA-GEEVPIEVLN--NIG 410
                P  A  + +LG  +   + G    A++ ++ A  +  +A GE+ P    +  N+G
Sbjct: 514 LGEKHPSTASTYGNLG--VAYQNKGHYDKAIELYEKALAIRVEALGEKHPSTATSYGNLG 571

Query: 411 VIHFEKGEFESA 422
           V +  KGE++ A
Sbjct: 572 VAYQNKGEYDKA 583



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 186/463 (40%), Gaps = 87/463 (18%)

Query: 39  AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMH-----EPSTWVGKGQLL 93
           A+ N LG+ Y   GK +            A ++Y KA  I +       PST      L 
Sbjct: 313 ALYNNLGLAYDNKGKYDK-----------AIEFYEKALAITVEALGEKHPSTATSYNNLG 361

Query: 94  LA---KGEVEQASS----AFKIVLEADRDNVPAL------LGQACVEFNRGRYSDSLEFY 140
            A   KGE ++A +    A  I +E   +  P+       LG A    ++G +  ++ FY
Sbjct: 362 NAYADKGEYDRAIAYVEKALAITVETVGEKHPSTASTYGNLGNAYD--SKGDHDKAVHFY 419

Query: 141 KRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
           ++AL +        HPS        +G      G   KA Q +++AL +  E +      
Sbjct: 420 EKALAIKVETLGEKHPSTADTYN-NLGGAYDSKGDYKKAIQLYEKALAIQVETLGEKHPS 478

Query: 193 AVMDLQANEAAGIRKG-----MEKMQRAFEIY--------PYCAMALNYLANHFFFTGQH 239
                     A   KG     +++ ++A  IY        P  A     L   +   G +
Sbjct: 479 TASTYNNLGNAYASKGEYDRAVQQYEKALAIYAEALGEKHPSTASTYGNLGVAYQNKGHY 538

Query: 240 FLVEQLTETALAVTNHG-----PTKSHSYYNLARSYHSKGDYEKAGLYY----MASVKEI 290
               +L E ALA+         P+ + SY NL  +Y +KG+Y+KA  +Y      +V+ +
Sbjct: 539 DKAIELYEKALAIRVEALGEKHPSTATSYGNLGVAYQNKGEYDKAIEFYEKDLAITVETL 598

Query: 291 NKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIY 341
            + H      Y  LG+     G +  A+  +E+ L I        +P   +T   LG  Y
Sbjct: 599 GERHPSTADTYNNLGEAYRHKGKYDKAIEFYEQGLAIKVETLGEKHPSTAQTYNNLGIAY 658

Query: 342 VQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTG---AALDAFKTA 390
              G ++KA E   +   I         P  A  + +LG  L   + G    A++ ++ A
Sbjct: 659 DHKGDLDKAVEFYEQGLAIKVETLGEKHPSTASTYNNLG--LAFKNKGHYDKAVEFYEQA 716

Query: 391 RTLLKKA-GEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 430
           R +  +A GE+ P     L NIG++H ++GE E A    + AL
Sbjct: 717 RAVYVEALGEKHPYTAMTLANIGLLHDKRGEKEQACAYTQQAL 759


>gi|407462460|ref|YP_006773777.1| O-linked GlcNAc transferase [Candidatus Nitrosopumilus koreensis
           AR1]
 gi|407046082|gb|AFS80835.1| O-linked GlcNAc transferase [Candidatus Nitrosopumilus koreensis
           AR1]
          Length = 366

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 36/316 (11%)

Query: 65  FILATQYYNKA-SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           F+  + YY ++  ++D    S       +L  + + E + S    +LE   DN+ AL  +
Sbjct: 2   FVFFSSYYCESFGQVD---TSINFENALMLYKEKKYEGSLSEIDKILEKYPDNIEALNSK 58

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
             +   +G+Y ++L+ +++A  + PS   +I  GIG   + L +   A   F   LQ+D 
Sbjct: 59  GTILLAQGKYVNALQNFEKAATIDPSNLESIN-GIGKAYFHLNRYDAAMNFFGHVLQIDR 117

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY-------PYCAMALNYLANHFFFT 236
            N +AL+           +  +   +E+   +   +       P    AL         T
Sbjct: 118 RNFDALIG----------SGNVLSKLEQFDDSILFFNIVLEKDPRNVDALIGKGTALLNT 167

Query: 237 GQHFLV----EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
            QH L     +++ E  L+ T+    K   ++ L        +YEK+ + + A ++  ++
Sbjct: 168 NQHKLALSIYDKILEIDLSNTDALNGKGKIFFEL-------DEYEKSRIAFTAVLE--SE 218

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
           P E I    GL ++ L       +   +EK+L I PDN E L     + V+LG+ ++A E
Sbjct: 219 P-ENIEALLGLSELNLHEHKNIKSQQMYEKILSIDPDNIEALIGKASVLVELGKFDEALE 277

Query: 353 LLRKAAKIDPRDAQAF 368
              +A ++DP +  A 
Sbjct: 278 YFDEALEVDPDNPDAL 293



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 12/158 (7%)

Query: 41  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 100
           +N +G  Y +L + +            A  ++    +ID       +G G +L    + +
Sbjct: 89  INGIGKAYFHLNRYDA-----------AMNFFGHVLQIDRRNFDALIGSGNVLSKLEQFD 137

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
            +   F IVLE D  NV AL+G+     N  ++  +L  Y + L++  S   A+  G G 
Sbjct: 138 DSILFFNIVLEKDPRNVDALIGKGTALLNTNQHKLALSIYDKILEIDLSNTDALN-GKGK 196

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 198
             ++L +  K+R AF   L+ +PEN+EAL+ L+ ++L 
Sbjct: 197 IFFELDEYEKSRIAFTAVLESEPENIEALLGLSELNLH 234



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%)

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G + L  G + +AL NFEK   I P N E++  +G  Y  L + + A        +ID R
Sbjct: 59  GTILLAQGKYVNALQNFEKAATIDPSNLESINGIGKAYFHLNRYDAAMNFFGHVLQIDRR 118

Query: 364 DAQAFIDLGELL 375
           +  A I  G +L
Sbjct: 119 NFDALIGSGNVL 130


>gi|406955606|gb|EKD84014.1| hypothetical protein ACD_39C00303G0002, partial [uncultured
           bacterium]
          Length = 675

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 128/624 (20%), Positives = 248/624 (39%), Gaps = 66/624 (10%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LGV Y  L +I+   +E E    L  Q Y     +           G     KGE  +A 
Sbjct: 13  LGVAYYQLNRIDEALKEWEIAVSLDPQNYEVLHNL-----------GIAYYNKGEDSKAI 61

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
             ++  LE    +           +N G+   ++  +++A  ++P     I   +G+  Y
Sbjct: 62  DYWEKCLEVRSHDPEIHFKLGIAYYNLGKEDQAISLWEKAANLNPD-DSDIFFRLGVAYY 120

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
             G   K+  AF ++++L+P+N EA   LA++  +       ++ +++ ++A  + P   
Sbjct: 121 NKGLDDKSVIAFSKSIELNPKNSEAHNNLAIVFYRLE---MYQQAIDEWKKALALSPRQP 177

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
              N L N +    QH    +  ET   + +  P  S  Y+ L  +Y    D EKA   +
Sbjct: 178 EIFNNLGNAYSKLNQH---REAIETWQKILDLTPENSEVYFKLGSAYGKLDDLEKAIKSW 234

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
              +  +N P++ I  ++ LG  Q   G+F+ A+T +  V E   ++ +  + +G+ Y  
Sbjct: 235 EKCIS-LN-PND-IEAHFNLGVAQYNSGNFQKAITYWTTVREKRSEDADICEKIGNAYCG 291

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI 403
           L    +A +   +A      D Q    LG  +  S      +A    +  ++   +    
Sbjct: 292 LEDFAEAAKFWNRAISYVSDDPQLHHKLG--IAYSKLNKTQEAIFQWQKAIEIDSDH--F 347

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDALGDG-----IWLTLLDSKTKTYVIDASASMLQFK 458
           E  +N+G+ ++    F+ A   ++ A         ++  L  +  +   +D++ S  +  
Sbjct: 348 EAHHNLGIAYYNLQRFDEALNEWEKAKAQNPTDPDLYFKLGHAYRQKRKLDSAISSWK-- 405

Query: 459 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ---IHDTVAASVLYRLILFKYQDYVD 515
                         +EL  N     F L    ++   I D + A   +R +     + VD
Sbjct: 406 ------------RTIELDPNNPNTHFVLGNAYDEKGLIDDAILA---WRKVCELAPNDVD 450

Query: 516 AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAA 574
           A+  L      +N    +I    +A+++  +     + LG   +K + + KA E + +A 
Sbjct: 451 AHNNLGIAYFQKNMFDQAISEWEDAIRITPENGELYNKLGIAYIKLELFDKAVECWEKAL 510

Query: 575 SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAAN 634
               +  D  + L+        A  N +          +KA E++ RVI  +  +  A N
Sbjct: 511 KYKPEDADILSNLA-------TAYHNREM--------YDKAIEIWKRVIKYNPQDSEARN 555

Query: 635 GAGVVLAEKGQFDVSKDLFTQVQE 658
             G+    KG +D + DL+ +  E
Sbjct: 556 KLGIAYYNKGMYDQAIDLWKKAIE 579



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 17/270 (6%)

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
           R  +G+  Y+L ++ +A + ++ A+ LDP+N E L  L +      E +   K ++  ++
Sbjct: 10  RFKLGVAYYQLNRIDEALKEWEIAVSLDPQNYEVLHNLGIAYYNKGEDS---KAIDYWEK 66

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             E+  +       L   ++  G+      L E A    N  P  S  ++ L  +Y++KG
Sbjct: 67  CLEVRSHDPEIHFKLGIAYYNLGKEDQAISLWEKA---ANLNPDDSDIFFRLGVAYYNKG 123

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
             +K+ + +  S++   K  E    +  L  V  +L  ++ A+  ++K L + P   E  
Sbjct: 124 LDDKSVIAFSKSIELNPKNSE---AHNNLAIVFYRLEMYQQAIDEWKKALALSPRQPEIF 180

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             LG+ Y +L Q  +A E  +K   + P +++ +  LG           LD  + A    
Sbjct: 181 NNLGNAYSKLNQHREAIETWQKILDLTPENSEVYFKLGS------AYGKLDDLEKAIKSW 234

Query: 395 KKAGEEVP--IEVLNNIGVIHFEKGEFESA 422
           +K     P  IE   N+GV  +  G F+ A
Sbjct: 235 EKCISLNPNDIEAHFNLGVAQYNSGNFQKA 264



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 37/349 (10%)

Query: 44  LGVYYTYLGK-----------IETKQREKEEHFILATQYYN------------KASRIDM 80
           LG+ Y+ L K           IE      E H  L   YYN            KA   + 
Sbjct: 319 LGIAYSKLNKTQEAIFQWQKAIEIDSDHFEAHHNLGIAYYNLQRFDEALNEWEKAKAQNP 378

Query: 81  HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQACVEFNRGRYSDSLE 138
            +P  +   G     K +++ A S++K  +E D +N     +LG A  E  +G   D++ 
Sbjct: 379 TDPDLYFKLGHAYRQKRKLDSAISSWKRTIELDPNNPNTHFVLGNAYDE--KGLIDDAIL 436

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 198
            +++  ++ P+   A    +G+  ++     +A   ++ A+++ PEN E    L +  ++
Sbjct: 437 AWRKVCELAPNDVDA-HNNLGIAYFQKNMFDQAISEWEDAIRITPENGELYNKLGIAYIK 495

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 258
                   K +E  ++A +  P  A  L+ LA  +       + ++  E    V  + P 
Sbjct: 496 LE---LFDKAVECWEKALKYKPEDADILSNLATAYH---NREMYDKAIEIWKRVIKYNPQ 549

Query: 259 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
            S +   L  +Y++KG Y++A   +  ++ E+N P +    YY +G  + + G    A+T
Sbjct: 550 DSEARNKLGIAYYNKGMYDQAIDLWKKAI-ELN-PKDAA-AYYNIGTEEFEKGRINEAIT 606

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            + KVLEI P   +    L  IY +  Q   A +  R+     P   +A
Sbjct: 607 AYMKVLEIDPKFIQVYYNLAVIYARKRQFRDAVDAARRFLNHTPTGVEA 655



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/364 (21%), Positives = 152/364 (41%), Gaps = 22/364 (6%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           E F  A +++N+A      +P      G       + ++A   ++  +E D D+  A   
Sbjct: 293 EDFAEAAKFWNRAISYVSDDPQLHHKLGIAYSKLNKTQEAIFQWQKAIEIDSDHFEAHHN 352

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
                +N  R+ ++L  +++A   +P+ P  +   +G    +  +L  A  +++R ++LD
Sbjct: 353 LGIAYYNLQRFDEALNEWEKAKAQNPTDPD-LYFKLGHAYRQKRKLDSAISSWKRTIELD 411

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P N      L       +E   I   +   ++  E+ P    A N L   +F   Q  + 
Sbjct: 412 PNNPNTHFVLGNA---YDEKGLIDDAILAWRKVCELAPNDVDAHNNLGIAYF---QKNMF 465

Query: 243 EQLT---ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
           +Q     E A+ +T   P     Y  L  +Y     ++KA   +  ++K   KP +    
Sbjct: 466 DQAISEWEDAIRIT---PENGELYNKLGIAYIKLELFDKAVECWEKALKY--KPEDADI- 519

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
              L         +  A+  +++V++  P + E    LG  Y   G  ++A +L +KA +
Sbjct: 520 LSNLATAYHNREMYDKAIEIWKRVIKYNPQDSEARNKLGIAYYNKGMYDQAIDLWKKAIE 579

Query: 360 IDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
           ++P+DA A+ ++G E         A+ A+     +  K      I+V  N+ VI+  K +
Sbjct: 580 LNPKDAAAYYNIGTEEFEKGRINEAITAYMKVLEIDPKF-----IQVYYNLAVIYARKRQ 634

Query: 419 FESA 422
           F  A
Sbjct: 635 FRDA 638


>gi|85858724|ref|YP_460926.1| hypothetical protein SYN_00192 [Syntrophus aciditrophicus SB]
 gi|85721815|gb|ABC76758.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
           SB]
          Length = 563

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 170/396 (42%), Gaps = 35/396 (8%)

Query: 42  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 101
           N +G YY  + K+  + R + E    A QY+ K   +     S  +    L   + ++EQ
Sbjct: 176 NVMGTYY--MAKVLVELRRESE----AEQYFKKTLLLKPSLESALIDLALLYERQKKLEQ 229

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A + +K  ++   + V   L        +G Y  +   ++ +L +  S    +   +GL 
Sbjct: 230 AVNIYKDFIQRYPEQVGIRLRLGEFYLRQGNYQAAEAVFRDSLTIDDSNKD-VHFTLGLL 288

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYP 220
            Y+  +  +A +AFQ+AL+L P + +    LA V D Q           ++  +A + Y 
Sbjct: 289 YYEQQRYDRAIEAFQKALKLAPSDQKIYYFLASVYDEQ-----------QENDKAMDTYG 337

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK----SHSYYNLARSYHSKGDY 276
             A    +  N     G     E   + A+++     +      + Y  L   Y  K  Y
Sbjct: 338 KVAPDSEWYGNARIRMGMLLREEGRIDAAISLIRETLSTEAKAPNLYAYLGSLYQEKAQY 397

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            +A       +K+  +  E    +YGLG+V  K+  F  ++   ++VLEI P++ E L  
Sbjct: 398 PEAENLLKEGLKDFPRSEEL---HYGLGEVYSKMDRFEDSIKEMKRVLEIDPEHAEALNF 454

Query: 337 LGHIYVQLG-QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
           +G+ Y + G  + +A++L+R+A  + P +      +G +    +        + A   LK
Sbjct: 455 IGYSYAERGIHLAEAEKLIRQALILKPDNGYILDSMGWVYFKQNR------IEQAIRYLK 508

Query: 396 KAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDA 429
           +A + +P +  +  ++G    + G F+ A  +++ A
Sbjct: 509 EADKRIPDDPTIAEHLGDALRKAGRFQEALDAYRRA 544



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 57/350 (16%)

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE--INKPHEFIFPYY 301
           Q  ETAL    H P  SH    LA  Y  KGD+ +A    +   KE  ++ P + +  + 
Sbjct: 62  QELETAL---RHDPLSSHLMKELASLYVEKGDFRRA----VDLCKESLVHDPDD-VDVHL 113

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY-------------------- 341
            LG + + + D+++A+ ++ KV+EI P N      LG +Y                    
Sbjct: 114 ILGNLYINMKDYKNAIRSYRKVIEIDPKNTSAYLYLGTLYAETERYDKAVDMYSLLLKND 173

Query: 342 --------------VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 387
                         V+L +  +A++  +K   + P    A IDL   L+         A 
Sbjct: 174 HDNVMGTYYMAKVLVELRRESEAEQYFKKTLLLKPSLESALIDLA--LLYERQKKLEQAV 231

Query: 388 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 447
              +  +++  E+V I +   +G  +  +G +++A   F+D+      LT+ DS    + 
Sbjct: 232 NIYKDFIQRYPEQVGIRL--RLGEFYLRQGNYQAAEAVFRDS------LTIDDSNKDVHF 283

Query: 448 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 507
              +  +L ++  +     E     ++L  +   + + LA + ++  +   A   Y  + 
Sbjct: 284 ---TLGLLYYEQQRYDRAIEAFQKALKLAPSDQKIYYFLASVYDEQQENDKAMDTYGKVA 340

Query: 508 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
              + Y +A +R+  + +    +  +I L+ E L    K PN  + LG L
Sbjct: 341 PDSEWYGNARIRMGMLLREEGRIDAAISLIRETLSTEAKAPNLYAYLGSL 390



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 91/445 (20%), Positives = 180/445 (40%), Gaps = 86/445 (19%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           L  + ++ GDFR A+   ++ L   PD+ +    LG++Y+ +   + A    RK  +IDP
Sbjct: 81  LASLYVEKGDFRRAVDLCKESLVHDPDDVDVHLILGNLYINMKDYKNAIRSYRKVIEIDP 140

Query: 363 RDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE- 420
           ++  A++ LG L   ++    A+D +    +LL K   +      N +G  +  K   E 
Sbjct: 141 KNTSAYLYLGTLYAETERYDKAVDMY----SLLLKNDHD------NVMGTYYMAKVLVEL 190

Query: 421 ----SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
                A Q FK  L       LL    ++ +ID                           
Sbjct: 191 RRESEAEQYFKKTL-------LLKPSLESALID--------------------------- 216

Query: 477 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
              + +L+   + LEQ      A  +Y+  + +Y + V   LRL      + N Q +  +
Sbjct: 217 ---LALLYERQKKLEQ------AVNIYKDFIQRYPEQVGIRLRLGEFYLRQGNYQAAEAV 267

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD--ATDGKDSYATLSLGNWNY 594
             ++L ++    +    LG L  +   + +A E F+ A     +D K  Y         +
Sbjct: 268 FRDSLTIDDSNKDVHFTLGLLYYEQQRYDRAIEAFQKALKLAPSDQKIYY---------F 318

Query: 595 FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 654
            A++ +E++         +KA + Y +V         A    G++L E+G+ D +  L  
Sbjct: 319 LASVYDEQQEN-------DKAMDTYGKVAPDSEWYGNARIRMGMLLREEGRIDAAISLIR 371

Query: 655 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY-LAR 713
           +     + S   + P+++  L  +Y  +  +  A  + +  L+ F     ++ L Y L  
Sbjct: 372 E-----TLSTEAKAPNLYAYLGSLYQEKAQYPEAENLLKEGLKDF---PRSEELHYGLGE 423

Query: 714 THYEAEQWQDCKKSLLRAIHLAPSN 738
            + + ++++D  K + R + + P +
Sbjct: 424 VYSKMDRFEDSIKEMKRVLEIDPEH 448


>gi|356570865|ref|XP_003553604.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY-like [Glycine
           max]
          Length = 917

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 167/394 (42%), Gaps = 66/394 (16%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA-CVEF-NRGRYSDSLEFYKRAL 144
           V    +L ++ +   A + ++ VLE+D  NV AL+G+  C++  N+GR   + E +  A+
Sbjct: 43  VSYANVLRSRNKFVDALAIYERVLESDGANVEALIGKGICLQMQNKGRL--AYESFSEAI 100

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQANE- 201
           +V P    A+    G+     G+L +A +++Q+ALQ+DP    A   LA++  D+  N  
Sbjct: 101 KVDPQNACALT-HCGILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIK 159

Query: 202 -AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHG 256
            A   + G++K   A ++ P+ A A       ++  G  +      +TAL+      +  
Sbjct: 160 LAGNTQDGIQKYFEALKVDPHYAPA-------YYNLGVVYSEMMQYDTALSFYEKAASER 212

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-----EINKPHEFIF------------- 298
           P  + +Y N+   + ++GD E A   Y   +      EI K +  I              
Sbjct: 213 PVYAEAYCNMGVIFKNRGDLESAITCYERCLTVSPNFEIAKNNMAIALTDLGTKVKLEGD 272

Query: 299 --------------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
                                 Y LG    ++  F  A+  +E      P   E    LG
Sbjct: 273 INQGVTLYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLG 332

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 398
            IY     ++KA E  + A  I P  +Q+  +LG   +       +DA   A ++++KA 
Sbjct: 333 VIYKDRENLDKAVECYQLALSIKPNFSQSLNNLG---VVYTVQGKVDA---AASMIEKAI 386

Query: 399 EEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 430
              P   E  NN+GV++ + G+   A  +++  L
Sbjct: 387 IANPTYAEAYNNLGVLYRDAGDIARAINAYEQCL 420



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 33/262 (12%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK----AQELLRK---AAKIDPR 363
           G    A  +++K L++ P      + L  +   +G   K     Q+ ++K   A K+DP 
Sbjct: 121 GRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQDGIQKYFEALKVDPH 180

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFES 421
            A A+ +LG +       + +  + TA +  +KA  E P+  E   N+GVI   +G+ ES
Sbjct: 181 YAPAYYNLGVVY------SEMMQYDTALSFYEKAASERPVYAEAYCNMGVIFKNRGDLES 234

Query: 422 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH-VEL----- 475
           A   ++  L          + +  + I  +   +   D+    + E D N  V L     
Sbjct: 235 AITCYERCL----------TVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTLYKKAL 284

Query: 476 --PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 533
              W+    ++NL     ++     A V Y L         +A   L  I K R NL  +
Sbjct: 285 YYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRENLDKA 344

Query: 534 IELVNEALKVNGKYPNALSMLG 555
           +E    AL +   +  +L+ LG
Sbjct: 345 VECYQLALSIKPNFSQSLNNLG 366


>gi|145512772|ref|XP_001442298.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409633|emb|CAK74901.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1421

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 46/311 (14%)

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            G L   K +++ A+ +F  +L  +  +  AL+  A +   +G +  + ++ K AL+V P+
Sbjct: 1043 GTLYFKKKDLKSAAKSFITLLRINNKHPEALIEYATISSIQGNFEKAKKYLKYALKVSPN 1102

Query: 150  CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
             P A +RLG+ + + KL +L  A + FQ+   +DP N +A   +     Q  E   + +G
Sbjct: 1103 NPVANMRLGL-IYQTKLQELNSAIECFQQVAIVDPTNYKAYYYMGQCYFQKGE---LDEG 1158

Query: 209  MEKMQRAFE---------------IYPY--CAMALNY-----------------LANHFF 234
            +E M ++ +               +Y     A AL Y                 L N ++
Sbjct: 1159 IEYMNQSLKHNQSFGLAWKAVGNIMYEMNQPATALRYFQKAIDLDKNDMEAKIRLGNCYY 1218

Query: 235  FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
               Q     Q+ E    +  +   + H    +A  Y+ K D+E+A L+Y  ++  IN   
Sbjct: 1219 LQDQFEQAIQIYEEISHLDQNEELEQH----MANCYYKKNDFEEAVLHYQRALS-INS-- 1271

Query: 295  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
            + I  YY LG     +  F  AL  FEKV++  P +        + +  L   E A +  
Sbjct: 1272 DKIECYYNLGDTYFTMEKFEEALECFEKVVKNDPQHSAAFYNYANTFFVLEDYENAAKYF 1331

Query: 355  RKAAKIDPRDA 365
             KA ++ P++ 
Sbjct: 1332 EKAIELQPQNV 1342



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 142/334 (42%), Gaps = 36/334 (10%)

Query: 64   HFILATQYYNKASRIDMHEPSTWVGKGQLLLAK-GEVEQASSAFKIVLEADRDNVPALLG 122
            +F  A +Y   A ++  + P   +  G +   K  E+  A   F+ V   D  N  A   
Sbjct: 1085 NFEKAKKYLKYALKVSPNNPVANMRLGLIYQTKLQELNSAIECFQQVAIVDPTNYKAYYY 1144

Query: 123  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
                 F +G   + +E+  ++L+ H    G     +G   Y++ Q   A + FQ+A+ LD
Sbjct: 1145 MGQCYFQKGELDEGIEYMNQSLK-HNQSFGLAWKAVGNIMYEMNQPATALRYFQKAIDLD 1203

Query: 183  PENVEALVALA---VMDLQANEAAGIRKGMEKMQRAFEIYPY---C-------------- 222
              ++EA + L     +  Q  +A  I + +  + +  E+  +   C              
Sbjct: 1204 KNDMEAKIRLGNCYYLQDQFEQAIQIYEEISHLDQNEELEQHMANCYYKKNDFEEAVLHY 1263

Query: 223  --AMALN-------YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
              A+++N       Y     +FT + F  E+  E    V  + P  S ++YN A ++   
Sbjct: 1264 QRALSINSDKIECYYNLGDTYFTMEKF--EEALECFEKVVKNDPQHSAAFYNYANTFFVL 1321

Query: 274  GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
             DYE A  Y+  +++   +P    +  Y + Q+ +K  D   A  + ++ + + P+N +T
Sbjct: 1322 EDYENAAKYFEKAIEL--QPQNVDWRNY-VAQLYIKKCDLNQAKRHLDESIRLQPNNPDT 1378

Query: 334  LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            L    + Y Q+G  ++A +  ++   +D  + QA
Sbjct: 1379 LAKYANYYYQIGNYQEALQKAKQTLVLDETNDQA 1412



 Score = 46.2 bits (108), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 171/405 (42%), Gaps = 59/405 (14%)

Query: 67   LATQYYNKASRIDM---HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
            +A QY  K + +D     E   W   G   +++ E ++A   F+I  +  +D V + L  
Sbjct: 844  IAKQYLLKVTEMDPLFEAENVNW-ALGTFFVSEKEWKKALHHFRICYQYSQDRVKSYLEI 902

Query: 124  ACVEFNRGRYSDSLEFYKRALQVHPS--CPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
            A    N G    + + YKRA+  +     P      +G  + K  QL +      +A  L
Sbjct: 903  ARCYQNLGEVEKAEKTYKRAIDANNKDYLP---YYKLGQMQIKNKQLKEGIDNLSKAQTL 959

Query: 182  DPENVEALVAL--AVM----DLQANEAAGI--RKGM----------EKMQRAFEIYPYCA 223
            D +N++ ++ L  A+M    D  A + A I   KGM          + + RA+E      
Sbjct: 960  DYQNMDIIIKLGEALMIHDEDPTAIDQAVIVLHKGMIVDPLNQECTDALARAYEKKGDLD 1019

Query: 224  MALNY--LA---------NHFFFTGQHFLVEQLTE------TALAVTNHGPTKSHSYYNL 266
             A+ Y  LA         +H++    +F  + L        T L + N  P     Y  +
Sbjct: 1020 NAIKYGKLATEQPNSNQNSHYYLGTLYFKKKDLKSAAKSFITLLRINNKHPEALIEYATI 1079

Query: 267  ARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQV-QLKLGDFRSALTNFEKVL 324
            +     +G++EKA  Y   ++K   N P         LG + Q KL +  SA+  F++V 
Sbjct: 1080 SSI---QGNFEKAKKYLKYALKVSPNNP----VANMRLGLIYQTKLQELNSAIECFQQVA 1132

Query: 325  EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-A 383
             + P N +    +G  Y Q G++++  E + ++ K +     A+  +G ++   +  A A
Sbjct: 1133 IVDPTNYKAYYYMGQCYFQKGELDEGIEYMNQSLKHNQSFGLAWKAVGNIMYEMNQPATA 1192

Query: 384  LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 428
            L  F+ A  L K       +E    +G  ++ + +FE A Q +++
Sbjct: 1193 LRYFQKAIDLDKND-----MEAKIRLGNCYYLQDQFEQAIQIYEE 1232


>gi|449274778|gb|EMC83856.1| Tetratricopeptide repeat protein 6, partial [Columba livia]
          Length = 617

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 42/313 (13%)

Query: 82  EPSTWVGKGQLLLAKGEVEQASSAFKI---VLEADRDNVPALLGQACVEFNRGRY---SD 135
           EPS  V  G++ +   + + A  +FK    +L +    +P     A + +  GR      
Sbjct: 56  EPSALVILGKIQMKANKTKDAVRSFKKAINLLMSSAKILPKTFENAEIYYLTGRCYMEQK 115

Query: 136 SL----EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           SL    + +  A+++H   P A     GLCR +L +  K  Q F RAL L P + +A +A
Sbjct: 116 SLLRARDAFSMAIRLHSHYPDAFYQR-GLCRMQLRK-AKCIQDFNRALALCPSHFQAYMA 173

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH---FFFTG----QHFLVEQ 244
           LA                    R F+    C+ A+  + N    +F+ G    Q+   + 
Sbjct: 174 LATY-------------YGSQGRYFQAILNCSEAIKIIPNSVQAYFYRGILKCQNKTFKA 220

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA----GLYYMASVKEINKPHEFIFPY 300
             E    V +   T   +YYN A  YH   D+ KA    G+  +  + E     E  F  
Sbjct: 221 AIEDLSEVIDLNATCILAYYNRAVCYHQIKDFRKALKDYGIILLLELSE-----EIAFKV 275

Query: 301 -YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
               G + ++LGD+ +A  +F+    + PD+ +  +ALG  Y ++ + E A     +A K
Sbjct: 276 LINRGVLYMELGDYANACEDFKGATLLSPDDSQIFQALGICYYRIHEFEDAVRSFDQALK 335

Query: 360 IDPRDAQAFIDLG 372
           +DP    A+I  G
Sbjct: 336 LDPVSVDAYIGRG 348



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 58/288 (20%), Positives = 111/288 (38%), Gaps = 48/288 (16%)

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           L+ +  +    G Y+++ E +K A  + P     I   +G+C Y++ +   A ++F +AL
Sbjct: 276 LINRGVLYMELGDYANACEDFKGATLLSPD-DSQIFQALGICYYRIHEFEDAVRSFDQAL 334

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA--------- 230
           +LDP +V+A +      ++  +  G ++  +   RA  + P C  A   LA         
Sbjct: 335 KLDPVSVDAYIGRGNSYMENGDEDGCKQAQKDFLRAIHLNPKCIKARVCLAYNLQVLRKF 394

Query: 231 ----NHFF------------FTGQHFLVEQLTET---------ALAVTNHGPTKSH-SYY 264
               N F             + G+  +  Q+ ET         AL +    P  ++  + 
Sbjct: 395 QRAWNQFTVAICMDPKCLAAYDGRASVCLQMGETFAAFLDTNAALKLATTAPLLTNRGFI 454

Query: 265 N--LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           N  +     +  DY++A          I+    +   Y+    +  +   F  A   + K
Sbjct: 455 NHLMGHLTCAMKDYQQA----------ISVDPNYALAYFNAANIYFQNRQFSQAYCYYSK 504

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           VL++ P N   +         L   E+A+E   KA  + P  A  + +
Sbjct: 505 VLQLEPRNESAIMNRAVTNTLLNNTEEAKEDFEKAICLCPFSAAVYFN 552


>gi|148264943|ref|YP_001231649.1| hypothetical protein Gura_2904 [Geobacter uraniireducens Rf4]
 gi|146398443|gb|ABQ27076.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 265

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 25/249 (10%)

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
           RL  G+   + G+ GKA   F   ++++P+N E    L        E+    + ++ +  
Sbjct: 8   RLAEGISLLETGEYGKAATEFSACIEIEPDNPEGYFCLGE---ALAESGKQDEAIKTITA 64

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSY 270
             E+ P    AL  L + +F  G+H       + A+A    VT+  P ++  Y ++   Y
Sbjct: 65  GLELAPDDVEALTALGDLYFEGGRH-------KDAIACYKKVTDLRPKEADGYVSIGLVY 117

Query: 271 HS---KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
           +S     D +KA      S  E++ PH  +F    LG +   LG    A+  + K +EI 
Sbjct: 118 NSLERVDDAQKA----FNSALEVD-PHN-VFALNALGDLYYGLGKNDEAVAAYRKGIEID 171

Query: 328 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 387
           PD+      LG +Y  LG ++ A++   +A ++DP    +++ LG + I  D     DA 
Sbjct: 172 PDDATAYFNLGDLYYDLGDLDAAEKETLEAIRLDPNFTMSYLTLGNVCI--DQERLTDAV 229

Query: 388 KTARTLLKK 396
           K     LKK
Sbjct: 230 KYFELYLKK 238



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 22/221 (9%)

Query: 58  QREKEEHFILATQYYNKAS-------RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           +R  E   +L T  Y KA+        I+   P  +   G+ L   G+ ++A       L
Sbjct: 7   ERLAEGISLLETGEYGKAATEFSACIEIEPDNPEGYFCLGEALAESGKQDEAIKTITAGL 66

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           E   D+V AL     + F  GR+ D++  YK+   + P       + IGL    L ++  
Sbjct: 67  ELAPDDVEALTALGDLYFEGGRHKDAIACYKKVTDLRPKEADG-YVSIGLVYNSLERVDD 125

Query: 171 ARQAFQRALQLDPENVEALVALAVM--DLQANE--AAGIRKGMEKMQRAFEIYPYCAMAL 226
           A++AF  AL++DP NV AL AL  +   L  N+   A  RKG+       EI P  A A 
Sbjct: 126 AQKAFNSALEVDPHNVFALNALGDLYYGLGKNDEAVAAYRKGI-------EIDPDDATAY 178

Query: 227 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
             L + ++  G     E+ T  A+ +    P  + SY  L 
Sbjct: 179 FNLGDLYYDLGDLDAAEKETLEAIRLD---PNFTMSYLTLG 216


>gi|340504470|gb|EGR30909.1| tpr repeat protein [Ichthyophthirius multifiliis]
          Length = 1212

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 169/386 (43%), Gaps = 38/386 (9%)

Query: 54   IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
            IE +Q EK      A  Y+++A +ID +       KG  L    + E+AS  F+ ++  +
Sbjct: 654  IEIQQYEK------AISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKASQCFQNIINME 707

Query: 114  RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
             +N  A L Q     N  +Y  SLE   +A+ ++ +   AI +   +   ++ Q  +A +
Sbjct: 708  PNNQKAYLNQGICLKNLFQYQQSLECLNKAILLNENDFQAIFIKAKVLN-EIKQYQEAIE 766

Query: 174  AFQRALQLDPENVEALVALAV--MDL-QANEAAGIRKGMEKMQRAF-EIYPYCAMALNYL 229
             ++RAL+LD +N E   +L +   +L Q  EA        +  ++F E Y Y  +A    
Sbjct: 767  YYKRALKLDCKNYEVFYSLGISFYNLEQFQEAINYFDETIQFNQSFLEAYFYRGVA---- 822

Query: 230  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
                FF  Q +  ++  ++   V    P    +Y     S+     YE + L Y  +   
Sbjct: 823  ----FFNIQKY--DEAIDSFQKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEA--- 873

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
            ++K  E+   Y+  G + + L  ++ ++  FE++L     + E     G    +  + ++
Sbjct: 874  LSKNPEYEIAYFNKGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKGIALKEQKKFKE 933

Query: 350  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI-----E 404
            A E   KA +I+ +  QA+         ++ G AL   +  +  +K   + + I     E
Sbjct: 934  AIESFEKAIEINEKYYQAY---------NNQGIALTEIQEYQKAMKCYEKAIKINKNYAE 984

Query: 405  VLNNIGVIHFEKGEFESAHQSFKDAL 430
              NN G+I F   EF  A + ++ A+
Sbjct: 985  AYNNKGIILFFLNEFTDAIKCYQKAI 1010



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/346 (20%), Positives = 135/346 (39%), Gaps = 57/346 (16%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A ++Y KA   D         KG + +   + E+A+  F   +  D+ +      +    
Sbjct: 121 AIKFYEKA---DPQNCLVQKNKGNIFMNLRKYEEANKCFDQAILLDKQDFECYYNKGNSL 177

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
                Y +++++Y++A++++P+   A     G       +  +A   F++A++++P   E
Sbjct: 178 TKLKMYKEAIQYYEKAIEINPNYSNA-YFNKGNILISFQKNVEAFIQFEKAIKINPHFFE 236

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A           N    I    +K Q A + Y +C        N +F  G  + +    E
Sbjct: 237 AY----------NNRGNILFYQKKYQEAIDSYQFCIQINPNFPNAYFNQGNVYKILVQYE 286

Query: 248 TALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLY--------------------- 282
            A+   N      P  + +YY   +  +    YE A LY                     
Sbjct: 287 KAIFCYNKCITLNPNDTSAYYKKGKILNLLKKYEDAILYLDKAISLNPYFIKAYKIKAEV 346

Query: 283 ------------YMASVKEINKPH-EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
                        +  V E++K + +++      GQ+ +KL  +++++  FEK+L+IYP 
Sbjct: 347 LKNQRKYDDALIILEKVIEVDKQNLKYLIK---QGQLLMKLKQYQNSIDCFEKILQIYPL 403

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
                + +G  Y  L + EKA     K   +D +D   F  +G +L
Sbjct: 404 QENIFQYIGKNYYYLEKYEKALFYFEKI--VDNKDFDIFFFIGNIL 447



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 129/310 (41%), Gaps = 20/310 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A QYY KA  I+ +  + +  KG +L++  +  +A   F+  ++ +     A   +  + 
Sbjct: 186 AIQYYEKAIEINPNYSNAYFNKGNILISFQKNVEAFIQFEKAIKINPHFFEAYNNRGNIL 245

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           F + +Y ++++ Y+  +Q++P+ P A     G     L Q  KA   + + + L+P +  
Sbjct: 246 FYQKKYQEAIDSYQFCIQINPNFPNA-YFNQGNVYKILVQYEKAIFCYNKCITLNPNDTS 304

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY----LANHFFFTGQHFLVE 243
           A      +    N        +  + +A  + PY   A       L N   +     ++E
Sbjct: 305 AYYKKGKI---LNLLKKYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILE 361

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           ++ E       +   +      L +  +S   +EK        + +I    E IF Y  +
Sbjct: 362 KVIEVDKQNLKYLIKQGQLLMKLKQYQNSIDCFEK--------ILQIYPLQENIFQY--I 411

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G+    L  +  AL  FEK+++    + +    +G+I  +L + EKA E   KA  I+  
Sbjct: 412 GKNYYYLEKYEKALFYFEKIVD--NKDFDIFFFIGNILKKLEKFEKAIEYYEKAQLINQN 469

Query: 364 DAQAFIDLGE 373
           D   ++  G+
Sbjct: 470 DYYIYLQKGD 479



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
           V Q  E  L +  +       Y  +   +    +Y++A LY+  S+ EIN+ + +   Y 
Sbjct: 50  VIQYQEKILQINENSDNNFFIYNKVGNIFIEIQEYKQAILYFKKSL-EINQNNSY--AYI 106

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            +G +   L  F  A+  +EK     P NC   K  G+I++ L + E+A +   +A  +D
Sbjct: 107 SIGNILNTLNKFNEAIKFYEKAD---PQNCLVQKNKGNIFMNLRKYEEANKCFDQAILLD 163

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
            +D + + + G      ++   L  +K A    +KA     IE+  N    +F KG
Sbjct: 164 KQDFECYYNKG------NSLTKLKMYKEAIQYYEKA-----IEINPNYSNAYFNKG 208



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 75/386 (19%), Positives = 158/386 (40%), Gaps = 22/386 (5%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           + ++G I     +K E F  A +YY KA  I+ ++   ++ KG      G+  +A S + 
Sbjct: 440 FFFIGNI----LKKLEKFEKAIEYYEKAQLINQNDYYIYLQKGDCYFFLGKFLEAISCYD 495

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             ++ +         +    +    +S++++ Y++ ++++P    +    IG     L +
Sbjct: 496 QAIQINEIFQDPFFNKGNAFYYLQNFSEAIKCYQKVIEINPQDFKSYN-NIGNSFQNLKK 554

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
              A   +++AL ++   +E L     + +   E    ++ +    +  EI  +   +L 
Sbjct: 555 YKDAAFNYEKALSINKFYIEGLFNKGSLLI---EIRSFQEAINCYDQILEISNFNVASLY 611

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
              N  FF  Q++  E +      +         ++ N++++      YEKA  Y+  ++
Sbjct: 612 NKGNILFFYLQNY-QESIKCYEEIIQKRNSYLLQTFINVSKALIEIQQYEKAISYFDQAL 670

Query: 288 K--EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
           K  + N   +F       G     +  F  A   F+ ++ + P+N +     G     L 
Sbjct: 671 KIDQYNIEAQF-----NKGICLNLIKKFEKASQCFQNIINMEPNNQKAYLNQGICLKNLF 725

Query: 346 QIEKAQELLRKAAKIDPRDAQA-FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 404
           Q +++ E L KA  ++  D QA FI    L        A++ +K A  L  K       E
Sbjct: 726 QYQQSLECLNKAILLNENDFQAIFIKAKVLNEIKQYQEAIEYYKRALKLDCK-----NYE 780

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDAL 430
           V  ++G+  +   +F+ A   F + +
Sbjct: 781 VFYSLGISFYNLEQFQEAINYFDETI 806



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 122/594 (20%), Positives = 228/594 (38%), Gaps = 129/594 (21%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  Y +KA  ++ +    +  K ++L  + + + A    + V+E D+ N+  L+ Q  + 
Sbjct: 322 AILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILEKVIEVDKQNLKYLIKQGQLL 381

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
               +Y +S++ +++ LQ++P      +  IG   Y L +  KA   F++ +  D ++ +
Sbjct: 382 MKLKQYQNSIDCFEKILQIYPLQENIFQY-IGKNYYYLEKYEKALFYFEKIV--DNKDFD 438

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN------YL--ANHFFFTGQH 239
               +            I K +EK ++A E Y   A  +N      YL   + +FF G+ 
Sbjct: 439 IFFFIG----------NILKKLEKFEKAIEYYEK-AQLINQNDYYIYLQKGDCYFFLGKF 487

Query: 240 FLVEQLTETALAVT--------NHG-----------------------PTKSHSYYNLAR 268
                  + A+ +         N G                       P    SY N+  
Sbjct: 488 LEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIKCYQKVIEINPQDFKSYNNIGN 547

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
           S+ +   Y+ A   Y  ++  INK +  I   +  G + +++  F+ A+  ++++LEI  
Sbjct: 548 SFQNLKKYKDAAFNYEKAL-SINKFY--IEGLFNKGSLLIEIRSFQEAINCYDQILEISN 604

Query: 329 DNCETLKALGHI---YVQLGQ--IEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGA 382
            N  +L   G+I   Y+Q  Q  I+  +E+++K    +    Q FI++ + LI       
Sbjct: 605 FNVASLYNKGNILFFYLQNYQESIKCYEEIIQKR---NSYLLQTFINVSKALIEIQQYEK 661

Query: 383 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA-----------LG 431
           A+  F  A  +     ++  IE   N G+      +FE A Q F++            L 
Sbjct: 662 AISYFDQALKI-----DQYNIEAQFNKGICLNLIKKFEKASQCFQNIINMEPNNQKAYLN 716

Query: 432 DGIWLTLLDSKTKTYVIDASASMLQFKDMQ-LFHR--------------------FENDG 470
            GI L  L    ++      A +L   D Q +F +                     + D 
Sbjct: 717 QGICLKNLFQYQQSLECLNKAILLNENDFQAIFIKAKVLNEIKQYQEAIEYYKRALKLDC 776

Query: 471 NHVELPWNKVTVLFNLARLLE---------QIHDTVAASVLYRLILF----KYQ------ 511
            + E+ ++     +NL +  E         Q + +   +  YR + F    KY       
Sbjct: 777 KNYEVFYSLGISFYNLEQFQEAINYFDETIQFNQSFLEAYFYRGVAFFNIQKYDEAIDSF 836

Query: 512 --------DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
                   DY++AY+      K     + S+    EAL  N +Y  A    G++
Sbjct: 837 QKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEALSKNPEYEIAYFNKGNI 890


>gi|425459650|ref|ZP_18839136.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
 gi|389822559|emb|CCI29802.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
          Length = 736

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 155/338 (45%), Gaps = 31/338 (9%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P       LG G  
Sbjct: 380 ALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLGRGEA 439

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM----QRAFE 217
             KLG+  +A ++F+R L L+P   +A    A + L+  + +  +K +EK+    Q   +
Sbjct: 440 LDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQNDAK 499

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKSHSYYNLARSYHSK 273
           I+     +L  L +   + G     +Q    ALA+ +        K +S Y L +  ++ 
Sbjct: 500 IWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKGNSLYQLNKINNAL 552

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
             Y KAG +          P +F   YY  G +  KLG    AL  F +  +   +  + 
Sbjct: 553 ESYSKAGQF---------NP-QFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQA 602

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 392
               G +  QL + ++A     KA +I  R ++ FI +G       D   A+ A++ A  
Sbjct: 603 WLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQ 662

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 663 RQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 695



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 41/302 (13%)

Query: 72  YNKASRIDMHEP-STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 130
           Y KA +I+       W+G+G+ L   G+ ++A  +F+ VL  +     A  G+A +    
Sbjct: 418 YEKAIQINPDSAWQAWLGRGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLEL 477

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
            +YS + +  ++ L    +    I    G     L     A +A+ +AL ++ +N     
Sbjct: 478 QQYSAAQKALEKLLTFQQN-DAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWY 536

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL---TE 247
                  Q N+   I   +E   +A +  P  + A         +  Q  ++++L   +E
Sbjct: 537 QKGNSLYQLNK---INNALESYSKAGQFNPQFSQA---------YYSQGIILQKLGRNSE 584

Query: 248 TALAVTNHGPTKSHSY----------YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
              A T      S+ Y          + L R   +   YEKA        + I+     +
Sbjct: 585 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKA--------RRISSRKSEV 636

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA----QEL 353
           F   G+G    +LGD+  A+T +++ ++   DN ET K+LG+ + +LGQ E+A    QE 
Sbjct: 637 F--IGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQES 694

Query: 354 LR 355
           LR
Sbjct: 695 LR 696


>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
 gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
          Length = 397

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 24/293 (8%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G   L+ G   +A  AF   +E D DN+  L  +A      G+Y ++L FY++A++++  
Sbjct: 57  GLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIKINAE 116

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
            P  I   +     ++G+  +A +A+++AL+L P+   A    A   L  ++A   +  +
Sbjct: 117 DPD-IWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKA---LNLSQAGDYKAAI 172

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           E  ++  E       A         + G+   + Q+ +   A+  +         N A +
Sbjct: 173 EAYEKVLEENSDYKEA---------WVGKGIALGQMGKYDEAIIAYDKAIELD-PNFAEA 222

Query: 270 YHSKG-DYEKAGLY------YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           +H KG D +  G Y      Y  +V E++  ++  +   G+    L+   +  A+  F+K
Sbjct: 223 WHYKGVDMDSLGSYRQALKAYQKTV-ELDPENDDAWNNMGIDLENLE--KYDEAIKAFDK 279

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            +EI  +N +     G    Q+ + E+A E  RKA ++DP   +A+  LG +L
Sbjct: 280 AIEINSENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEAYSSLGFVL 332



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 10/299 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  +Y KA +I+  +P  W      L   G+ ++A  A++  LE   D   A  G+A   
Sbjct: 103 ALGFYEKAIKINAEDPDIWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNL 162

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G Y  ++E Y++ L+ +     A  +G G+   ++G+  +A  A+ +A++LDP   E
Sbjct: 163 SQAGDYKAAIEAYEKVLEENSDYKEAW-VGKGIALGQMGKYDEAIIAYDKAIELDPNFAE 221

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A     V     +     R+ ++  Q+  E+ P    A N +        ++    +  +
Sbjct: 222 AWHYKGV---DMDSLGSYRQALKAYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFD 278

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            A+ + +     +  +YN   +      +E+A   Y    K      E++  Y  LG V 
Sbjct: 279 KAIEINSE---NADVWYNKGFTLSQMQRFEEAAETYR---KATQLDPEYLEAYSSLGFVL 332

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
            +L  F  +L  +E+ L++ P+  ++          LG+ E+A+E  RKA +IDPR A+
Sbjct: 333 AQLRRFAESLEIYEQALKLNPEAADSWFGKAVCLSFLGREEEAEEAYRKAVEIDPRYAE 391



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           E  E +  A + ++KA  I+      W  KG  L      E+A+  ++   + D + + A
Sbjct: 265 ENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEA 324

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
                 V     R+++SLE Y++AL+++P    +   G  +C   LG+  +A +A+++A+
Sbjct: 325 YSSLGFVLAQLRRFAESLEIYEQALKLNPEAADSW-FGKAVCLSFLGREEEAEEAYRKAV 383

Query: 180 QLDPENVE 187
           ++DP   E
Sbjct: 384 EIDPRYAE 391


>gi|83814061|ref|YP_446792.1| hypothetical protein SRU_2700 [Salinibacter ruber DSM 13855]
 gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
          Length = 554

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 25/324 (7%)

Query: 81  HEPSTWVGKGQL------LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 134
           ++PS +   G L         +GE+E A      ++E       A + +  +  N GR  
Sbjct: 114 NDPSAYFDSGDLEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPE 173

Query: 135 DSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
           ++LE Y++AL V+P+     I LGI L    LG++ +A +A+  AL ++P + EAL  L 
Sbjct: 174 EALEAYEQALDVNPTDTETLINLGITLD--SLGRVDEALEAYDEALSINPLHGEALFNLG 231

Query: 194 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
           V  L+ +E   +   +E  QR  ++YP        L   +   G+        ++  A  
Sbjct: 232 VT-LERDEQ--LEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGED------EKSVEAYD 282

Query: 254 NH---GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
           NH    P    ++YN     +  G + +A   Y  ++   +   EF   YY  G  +   
Sbjct: 283 NHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHD---EFASAYYNRGNAEANQ 339

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           GD  +A+ ++E+VLE+   +  T   L   Y + G +  A+    K   +     +A+  
Sbjct: 340 GDLEAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYG 399

Query: 371 LGELLISSD-TGAALDAFKTARTL 393
           LG    + +    AL+ F+ A  L
Sbjct: 400 LGCCFDTDERPEEALECFRYAVNL 423



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 14/287 (4%)

Query: 78  IDMHEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 134
           I++H P T   W+ +G LL   G  E+A  A++  L+ +  +   L+       + GR  
Sbjct: 149 IELH-PYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVD 207

Query: 135 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
           ++LE Y  AL ++P   G     +G+   +  QL  A +AFQR   + PE+ E    L  
Sbjct: 208 EALEAYDEALSINP-LHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGY 266

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
              +  E     K +E      +I PY   A           G+     +  + ALA+ +
Sbjct: 267 CYDRLGED---EKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHD 323

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
                + +YYN   +  ++GD E A   Y   V E+  P      YY L     + GD R
Sbjct: 324 E---FASAYYNRGNAEANQGDLEAAVESY-ERVLELEGPDAAT--YYNLALAYEEQGDLR 377

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
           +A T +EK L++  +  E    LG  +    + E+A E  R A  +D
Sbjct: 378 AARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLD 424



 Score = 46.2 bits (108), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 47/352 (13%)

Query: 262 SYYNLARSYHSKGDYEKAGLYY-----MASVKEINKPHEFIFPYYG-----LGQVQLKLG 311
           +Y N   +Y   GD E+   +Y     M +  E+      + PY        G +   LG
Sbjct: 111 AYENDPSAYFDSGDLEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLG 170

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
               AL  +E+ L++ P + ETL  LG     LG++++A E   +A  I+P   +A  +L
Sbjct: 171 RPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNL 230

Query: 372 GELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF---- 426
           G  L   +   AA++AF+    +      E P EV   +G  +   GE E + +++    
Sbjct: 231 GVTLERDEQLEAAVEAFQRCADVYP----EHP-EVWYELGYCYDRLGEDEKSVEAYDNHL 285

Query: 427 ------KDALGD-GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH------- 472
                 KDA  + GI L  L    +   +++    L   D +    + N GN        
Sbjct: 286 DIDPYSKDAWYNRGIVLNRLGRFGE--AVESYDMALAIHD-EFASAYYNRGNAEANQGDL 342

Query: 473 ----------VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                     +EL        +NLA   E+  D  AA   Y   L    +Y +A+  L  
Sbjct: 343 EAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLGC 402

Query: 523 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
                   + ++E    A+ ++   P   +   D   K     +A E+++ A
Sbjct: 403 CFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHA 454



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 28/216 (12%)

Query: 25  EIDEYYADVRYERIAILNALGVY--------------------YTYLGKIETKQREKEEH 64
           +ID Y  D  Y R  +LN LG +                    Y   G  E  Q + E  
Sbjct: 286 DIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLE-- 343

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 124
              A + Y +   ++  + +T+         +G++  A + ++  L+   +   A  G  
Sbjct: 344 --AAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLG 401

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           C      R  ++LE ++ A+ +  + P         C YK+G+L +A +++Q A++LD  
Sbjct: 402 CCFDTDERPEEALECFRYAVNLDANVP-KFWTARADCAYKVGKLDEALESYQHAVRLDES 460

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
           N  A    A   L+  +     + +E  ++A E+ P
Sbjct: 461 NEHAWTGYAETLLEKEQP---EEALEAYRQALELDP 493



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 18/313 (5%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           E++E    A + + + + +    P  W   G      GE E++  A+   L+ D  +  A
Sbjct: 235 ERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDA 294

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
              +  V    GR+ +++E Y  AL +H     A     G      G L  A ++++R L
Sbjct: 295 WYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAY-YNRGNAEANQGDLEAAVESYERVL 353

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           +L+  +      LA+   +  +    R   EK       YP            ++  G  
Sbjct: 354 ELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYP----------EAWYGLGCC 403

Query: 240 FLVEQLTETALAV----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
           F  ++  E AL       N        +   A   +  G  ++A   Y  +V+ +++ +E
Sbjct: 404 FDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVR-LDESNE 462

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
               + G  +  L+      AL  + + LE+ P +  T        + LG+ +++   L+
Sbjct: 463 HA--WTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALK 520

Query: 356 KAAKIDPRDAQAF 368
            A ++DP   + F
Sbjct: 521 TAFRLDPAKKEEF 533



 Score = 39.7 bits (91), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 27/194 (13%)

Query: 8   QGKVEQFRQILE-EGSSPEIDEYY---------ADVR-----YERIAIL--NALGVYYTY 50
           +  VE + ++LE EG  P+   YY          D+R     YE+   L  N    +Y  
Sbjct: 343 EAAVESYERVLELEG--PDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGL 400

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
               +T +R +E     A + +  A  +D + P  W  +       G++++A  +++  +
Sbjct: 401 GCCFDTDERPEE-----ALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAV 455

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLG 169
             D  N  A  G A     + +  ++LE Y++AL++ P S     R    L    LG+  
Sbjct: 456 RLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALL--ALGRAD 513

Query: 170 KARQAFQRALQLDP 183
           ++ +A + A +LDP
Sbjct: 514 ESIRALKTAFRLDP 527


>gi|158523125|ref|YP_001530995.1| hypothetical protein Dole_3115 [Desulfococcus oleovorans Hxd3]
 gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 284

 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 17/272 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ ++A  AF  VL+   D  PA   +A   ++ G Y  ++  Y RAL ++P  P +   
Sbjct: 7   GQYDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFPESYN- 65

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
           G G     +GQ+ KA     RA++L P+  +A     V   +  +  G    +    RA 
Sbjct: 66  GRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIG---ALADHSRAI 122

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL----AVTNHGPTKSHSYYNLARSYHS 272
           ++ P      +  A  +   G  +L +   + A+    A     P  + +Y NLA ++  
Sbjct: 123 QMRP------DRAAEFYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNNLASAWME 176

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           KG  ++A   Y  ++    +  E +    G G V+ + GD+  AL + +K +E YP    
Sbjct: 177 KGQPDRAMAAYDKALSIFPRMAEAL---SGRGSVRAQAGDYTGALADLDKAIEFYPSYHT 233

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
                  +Y   G  EKA     KA  + P +
Sbjct: 234 AYYNRARVYQLTGNREKALANAVKAVGLFPNN 265



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G Y+KA     A  + ++   +F   Y      +  LGD+  A+ ++ + L I PD  E+
Sbjct: 7   GQYDKA---VEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFPES 63

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD--TGAALDAFKTAR 391
               G  +  +GQ++KA   L +A ++ P  A A+ + G  L  +    GA  D  +  +
Sbjct: 64  YNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSRAIQ 123

Query: 392 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 432
               +A      E  N  GV   EKG+ + A   F  AL +
Sbjct: 124 MRPDRAA-----EFYNARGVTWLEKGDPDKAIADFTAALAE 159



 Score = 43.1 bits (100), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 6/208 (2%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN+A  I+   P ++ G+G+     G++++A +     +E   D   A   +       G
Sbjct: 50  YNRALAINPDFPESYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTG 109

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            +  +L  + RA+Q+ P          G+   + G   KA   F  AL  +P    A   
Sbjct: 110 DFIGALADHSRAIQMRPDRAAEFYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNN 169

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
           LA   ++  +     + M    +A  I+P  A AL+   +     G +     L +   A
Sbjct: 170 LASAWMEKGQP---DRAMAAYDKALSIFPRMAEALSGRGSVRAQAGDY--TGALADLDKA 224

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           +  + P+   +YYN AR Y   G+ EKA
Sbjct: 225 IEFY-PSYHTAYYNRARVYQLTGNREKA 251


>gi|91202613|emb|CAJ72252.1| Hypothetical Protein kustd1507 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 700

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 17/205 (8%)

Query: 237 GQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EIN 291
           G  ++ + LT+ A++      ++ P  S++YYN+  +Y  K   ++  +++  +++  ++
Sbjct: 482 GTMYIDKGLTDKAISEFSKAIHYDPASSYAYYNMGNAYFDKNALDECIVFFNKAIQLNMH 541

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
           KP  F      LG   LK G+  +A+  + K L IYP   E    LG IY +  + E+A 
Sbjct: 542 KPQVF----NNLGSAYLKKGNPDAAIAQYRKALYIYPGYAEAHSNLGFIYTETNRFEEAL 597

Query: 352 ELLRKAAKIDPRDAQAFIDLGELLISSDTG--AALDAFKTARTLLKKAGEEVPIEVLNNI 409
             L+KA +++P  A A  +LG L         A ++   + R   +  G         N+
Sbjct: 598 SELKKALRLNPDHANAHNNLGALYCRQGLWDLAEMEFLSSIRANPRNIGAR------KNL 651

Query: 410 GVIHFEKGEFESAHQSFKDALGDGI 434
           G+I+F++G+ + A +     L D I
Sbjct: 652 GIIYFQQGKKQEAREQLLHVLKDDI 676


>gi|386391704|ref|ZP_10076485.1| TPR repeat-containing protein [Desulfovibrio sp. U5L]
 gi|385732582|gb|EIG52780.1| TPR repeat-containing protein [Desulfovibrio sp. U5L]
          Length = 1112

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 144/311 (46%), Gaps = 51/311 (16%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAK-GEVEQASSAFKIVLEAD-RDNVPALLGQACVEFN 129
           Y KA  +D  + + W+G G LL    G   ++  A++  +E D + + P +     ++ +
Sbjct: 654 YRKAIELDAKKDAPWIGLGNLLQKHLGRYAESEEAYRKAIELDAKKDAPWIGLGNLLQKH 713

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRL-GIG-LCRYKLGQLGKARQAFQRALQLDPENVE 187
            GRY++S E Y++A+++ P    AI   G+G L +  LG+  +A  A+++A++LDP+   
Sbjct: 714 PGRYAESEEAYRKAIELDPK--EAISWNGLGNLLKGHLGRHEEAETAYRKAIELDPKYA- 770

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                                          YP+  +  N L +H    G+H   E    
Sbjct: 771 -------------------------------YPWNGLG-NLLKDHL---GRHEEAETAYR 795

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSK-GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
            A+ +    P  ++ +  L        G YE+A   Y  ++ E++ P E  +P+ GLG +
Sbjct: 796 KAIELD---PKYAYPWIGLGNLLQDHFGRYEEAETAYRKAI-ELD-PKE-AYPWIGLGNL 849

Query: 307 -QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-QLGQIEKAQELLRKAAKIDPRD 364
            Q   G +  +   + K +E+ P    +   LG++     G+ E+++   RKA ++DP++
Sbjct: 850 LQDHFGRYEESEAAYRKAIELDPKEAISWNGLGNLLQDHFGRYEESEAAYRKAIELDPKE 909

Query: 365 AQAFIDLGELL 375
           A ++  LG LL
Sbjct: 910 AISWNGLGNLL 920



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 137/309 (44%), Gaps = 59/309 (19%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIG-LCRYKLGQLGKARQAFQRALQLDPENVEAL 189
           GRY +S E Y++A+++  +   A  +G+G L +  LG+  ++ +A+++A++LD +     
Sbjct: 645 GRYEESEEAYRKAIELD-AKKDAPWIGLGNLLQKHLGRYAESEEAYRKAIELDAKKDAPW 703

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
           + L   +L         +  E  ++A E+ P  A++ N L N                  
Sbjct: 704 IGLG--NLLQKHPGRYAESEEAYRKAIELDPKEAISWNGLGNLL---------------- 745

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
                    K H    L R   ++  Y KA          I    ++ +P+ GLG + LK
Sbjct: 746 ---------KGH----LGRHEEAETAYRKA----------IELDPKYAYPWNGLGNL-LK 781

Query: 310 --LGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-QLGQIEKAQELLRKAAKIDPRDAQ 366
             LG    A T + K +E+ P        LG++     G+ E+A+   RKA ++DP++A 
Sbjct: 782 DHLGRHEEAETAYRKAIELDPKYAYPWIGLGNLLQDHFGRYEEAETAYRKAIELDPKEAY 841

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVI---HFEKGEFES 421
            +I LG LL           ++ +    +KA E  P E +  N +G +   HF  G +E 
Sbjct: 842 PWIGLGNLLQDH-----FGRYEESEAAYRKAIELDPKEAISWNGLGNLLQDHF--GRYEE 894

Query: 422 AHQSFKDAL 430
           +  +++ A+
Sbjct: 895 SEAAYRKAI 903


>gi|294508725|ref|YP_003572784.1| hypothetical protein SRM_02912 [Salinibacter ruber M8]
 gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
          Length = 554

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 25/324 (7%)

Query: 81  HEPSTWVGKGQL------LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 134
           ++PS +   G L         +GE+E A      ++E       A + +  +  N GR  
Sbjct: 114 NDPSAYFDSGDLEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPE 173

Query: 135 DSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
           ++LE Y++AL V+P+     I LGI L    LG++ +A +A+  AL ++P + EAL  L 
Sbjct: 174 EALEAYEQALDVNPTDTETLINLGITLD--SLGRVDEALEAYDEALSINPLHGEALFNLG 231

Query: 194 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
           V  L+ +E   +   +E  QR  ++YP        L   +   G+        ++  A  
Sbjct: 232 VT-LERDEQ--LEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGED------EKSVEAYD 282

Query: 254 NH---GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
           NH    P    ++YN     +  G + +A   Y  ++   +   EF   YY  G  +   
Sbjct: 283 NHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHD---EFASAYYNRGNAEANQ 339

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           GD  +A+ ++E+VLE+   +  T   L   Y + G +  A+    K   +     +A+  
Sbjct: 340 GDLEAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYG 399

Query: 371 LGELLISSD-TGAALDAFKTARTL 393
           LG    + +    AL+ F+ A  L
Sbjct: 400 LGCCFDTDERPEEALECFRYAVNL 423



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 14/287 (4%)

Query: 78  IDMHEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 134
           I++H P T   W+ +G LL   G  E+A  A++  L+ +  +   L+       + GR  
Sbjct: 149 IELH-PYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVD 207

Query: 135 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
           ++LE Y  AL ++P   G     +G+   +  QL  A +AFQR   + PE+ E    L  
Sbjct: 208 EALEAYDEALSINP-LHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGY 266

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
              +  E     K +E      +I PY   A           G+     +  + ALA+ +
Sbjct: 267 CYDRLGED---EKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHD 323

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
                + +YYN   +  ++GD E A   Y   V E+  P      YY L     + GD R
Sbjct: 324 E---FASAYYNRGNAEANQGDLEAAVESY-ERVLELEGPDAAT--YYNLALAYEEQGDLR 377

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
           +A T +EK L++  +  E    LG  +    + E+A E  R A  +D
Sbjct: 378 AARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLD 424



 Score = 46.2 bits (108), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 47/352 (13%)

Query: 262 SYYNLARSYHSKGDYEKAGLYY-----MASVKEINKPHEFIFPYYG-----LGQVQLKLG 311
           +Y N   +Y   GD E+   +Y     M +  E+      + PY        G +   LG
Sbjct: 111 AYENDPSAYFDSGDLEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLG 170

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
               AL  +E+ L++ P + ETL  LG     LG++++A E   +A  I+P   +A  +L
Sbjct: 171 RPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNL 230

Query: 372 GELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF---- 426
           G  L   +   AA++AF+    +      E P EV   +G  +   GE E + +++    
Sbjct: 231 GVTLERDEQLEAAVEAFQRCADVYP----EHP-EVWYELGYCYDRLGEDEKSVEAYDNHL 285

Query: 427 ------KDALGD-GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH------- 472
                 KDA  + GI L  L    +   +++    L   D +    + N GN        
Sbjct: 286 DIDPYSKDAWYNRGIVLNRLGRFGE--AVESYDMALAIHD-EFASAYYNRGNAEANQGDL 342

Query: 473 ----------VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                     +EL        +NLA   E+  D  AA   Y   L    +Y +A+  L  
Sbjct: 343 EAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLGC 402

Query: 523 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
                   + ++E    A+ ++   P   +   D   K     +A E+++ A
Sbjct: 403 CFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHA 454



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 28/216 (12%)

Query: 25  EIDEYYADVRYERIAILNALGVY--------------------YTYLGKIETKQREKEEH 64
           +ID Y  D  Y R  +LN LG +                    Y   G  E  Q + E  
Sbjct: 286 DIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLE-- 343

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 124
              A + Y +   ++  + +T+         +G++  A + ++  L+   +   A  G  
Sbjct: 344 --AAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLG 401

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
           C      R  ++LE ++ A+ +  + P         C YK+G+L +A +++Q A++LD  
Sbjct: 402 CCFDTDERPEEALECFRYAVNLDANVP-KFWTARADCAYKVGKLDEALESYQHAVRLDES 460

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
           N  A    A   L+  +     + +E  ++A E+ P
Sbjct: 461 NEHAWTGYAETLLEKEQP---EEALEAYRQALELDP 493



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 18/313 (5%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           E++E    A + + + + +    P  W   G      GE E++  A+   L+ D  +  A
Sbjct: 235 ERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDA 294

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
              +  V    GR+ +++E Y  AL +H     A     G      G L  A ++++R L
Sbjct: 295 WYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAY-YNRGNAEANQGDLEAAVESYERVL 353

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           +L+  +      LA+   +  +    R   EK       YP            ++  G  
Sbjct: 354 ELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYP----------EAWYGLGCC 403

Query: 240 FLVEQLTETALAV----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
           F  ++  E AL       N        +   A   +  G  ++A   Y  +V+ +++ +E
Sbjct: 404 FDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVR-LDESNE 462

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
               + G  +  L+      AL  + + LE+ P +  T        + LG+ +++   L+
Sbjct: 463 HA--WTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALK 520

Query: 356 KAAKIDPRDAQAF 368
            A ++DP   + F
Sbjct: 521 TAFRLDPAKKEEF 533


>gi|428320555|ref|YP_007118437.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244235|gb|AFZ10021.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 838

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 14/305 (4%)

Query: 66  ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           I A   Y+KA  I   +   W  +G  L+  G +E+A +++   LE   D   A   +  
Sbjct: 499 IEAIASYDKALEIKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGV 558

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
              N GR  D++  +  AL+  P    A     G+    LG+   A  ++  AL+  P+ 
Sbjct: 559 ALVNLGRREDAIASWDEALKFKPDLHEAW-YNRGVALVNLGRREDAIASWDEALKFKPDL 617

Query: 186 VEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
            EA     LA+++L   E A     +    +A ++ P    A   L       G+   +E
Sbjct: 618 HEAWYNRGLALVNLGRREDA-----IASYGKALKLKPDFHEAWYNLGVVLHDLGR---IE 669

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
               +        P    +++N     H+ G +E+A   +  ++K     HE    +Y  
Sbjct: 670 DAIASYDKALEIKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHE---AWYSR 726

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G   + LG F  A+T++++ L+  PD  E     G +   LG+ E+A     KA K  P 
Sbjct: 727 GLALVNLGRFEEAITSWDEALKFKPDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPD 786

Query: 364 DAQAF 368
             +A+
Sbjct: 787 KHEAW 791



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 127/305 (41%), Gaps = 26/305 (8%)

Query: 68  ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A   ++KA  I  D HE   W  +G  L+  G  E A +++   L+   D   A   +  
Sbjct: 535 AIASWDKALEIKPDYHE--AWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGV 592

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
              N GR  D++  +  AL+  P    A     GL    LG+   A  ++ +AL+L P+ 
Sbjct: 593 ALVNLGRREDAIASWDEALKFKPDLHEAW-YNRGLALVNLGRREDAIASYGKALKLKPDF 651

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
            EA   L V+    ++   I   +    +A EI P      +Y   H  +  Q  ++  L
Sbjct: 652 HEAWYNLGVV---LHDLGRIEDAIASYDKALEIKP------DY---HEAWFNQGVVLHNL 699

Query: 246 TETALAVTNHGPTKS------HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
                A+ + G           ++Y+   +  + G +E+A   +  ++K     HE    
Sbjct: 700 GRFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAITSWDEALKFKPDKHE---A 756

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y  G V   LG F  A+ +++K L+  PD  E     G     LG+I++A     KA +
Sbjct: 757 WYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEAWYIRGLALYNLGRIKEAIASYDKALE 816

Query: 360 IDPRD 364
           I P D
Sbjct: 817 IKPDD 821



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 156/373 (41%), Gaps = 35/373 (9%)

Query: 68  ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A   Y+KA  +  D HE   W  +G  L   G +E+A +++   LE   D   A   +  
Sbjct: 434 AIASYDKALELKPDYHE--AWNNRGNALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVL 491

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
           +  N GR  +++  Y +AL++ P    A     G     LG++ +A  ++ +AL++ P+ 
Sbjct: 492 LLDNLGRI-EAIASYDKALEIKPDDHEAWN-NRGYALVNLGRIEEAIASWDKALEIKPDY 549

Query: 186 VEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
            EA     +A+++L   E A     +     A +  P    A       ++  G   +  
Sbjct: 550 HEAWYNRGVALVNLGRREDA-----IASWDEALKFKPDLHEA-------WYNRGVALVNL 597

Query: 244 QLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
              E A+A  +      P    ++YN   +  + G  E A   Y  ++K     HE    
Sbjct: 598 GRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAIASYGKALKLKPDFHE---A 654

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y LG V   LG    A+ +++K LEI PD  E     G +   LG+ E+A     KA K
Sbjct: 655 WYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALK 714

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKG 417
                 +A+   G  L++      L  F+ A T   +A +  P   E     G++ +  G
Sbjct: 715 FKADYHEAWYSRGLALVN------LGRFEEAITSWDEALKFKPDKHEAWYIRGLVLYNLG 768

Query: 418 EFESAHQSFKDAL 430
            FE A  S+  AL
Sbjct: 769 RFEEAIASYDKAL 781



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 153/369 (41%), Gaps = 27/369 (7%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+KA +    +   W  +G  L   G  E+A +++   L+   D   A   +    
Sbjct: 264 AIASYDKALKFKPDKHEVWNIRGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLAL 323

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           +N GR  +++  + +AL++ P     +    G     LG+  +A  ++ +AL+L P+  E
Sbjct: 324 YNLGRREEAIASWDKALEIKPDLH-EVWYNRGYALDDLGRFEEALTSYNKALELKPDYHE 382

Query: 188 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A     L + +L   E A     +    +A E+ P    A N   N     G+   +E+ 
Sbjct: 383 AWNNRGLLLHNLGRFEEA-----LTSYNKALELKPDYHEAWNNRGNALDKLGR---IEEA 434

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYY 301
             +        P    ++ N   +  + G  E+A   Y  +++     HE     +    
Sbjct: 435 IASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLD 494

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            LG+++        A+ +++K LEI PD+ E     G+  V LG+IE+A     KA +I 
Sbjct: 495 NLGRIE--------AIASYDKALEIKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIK 546

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
           P   +A+ + G  L+  + G   DA  +    LK   +    E   N GV     G  E 
Sbjct: 547 PDYHEAWYNRGVALV--NLGRREDAIASWDEALKFKPD--LHEAWYNRGVALVNLGRRED 602

Query: 422 AHQSFKDAL 430
           A  S+ +AL
Sbjct: 603 AIASWDEAL 611



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 156/375 (41%), Gaps = 39/375 (10%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL--EADRDNVPALLGQAC 125
           A   Y+KA +    +   W  +G  L+  G ++ A +++   L  + D+  V  + G A 
Sbjct: 230 AIASYDKALKFKPDKHEAWSSRGLALVKLGRLQDAIASYDKALKFKPDKHEVWNIRGLAL 289

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
            +   GR+ +++  Y +AL+  P    A  +  GL  Y LG+  +A  ++ +AL++ P+ 
Sbjct: 290 DDL--GRFEEAIASYDKALKFKPDLHEAWYIR-GLALYNLGRREEAIASWDKALEIKPDL 346

Query: 186 VEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
            E       A+ DL   E A     +    +A E+ P      +Y   H  +  +  L+ 
Sbjct: 347 HEVWYNRGYALDDLGRFEEA-----LTSYNKALELKP------DY---HEAWNNRGLLLH 392

Query: 244 QLTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
            L     A+T++       P    ++ N   +    G  E+A   Y  +++     HE  
Sbjct: 393 NLGRFEEALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHE-- 450

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             +   G     LG    A+ +++K LEI PD  E       +   LG+IE A     KA
Sbjct: 451 -AWNNRGNALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGRIE-AIASYDKA 508

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFE 415
            +I P D +A+ + G  L++      L   + A     KA E  P   E   N GV    
Sbjct: 509 LEIKPDDHEAWNNRGYALVN------LGRIEEAIASWDKALEIKPDYHEAWYNRGVALVN 562

Query: 416 KGEFESAHQSFKDAL 430
            G  E A  S+ +AL
Sbjct: 563 LGRREDAIASWDEAL 577



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 141/358 (39%), Gaps = 32/358 (8%)

Query: 82  EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 141
           E   W  +G     KG+ E A +++   LE   +   A   +     N GR+ +++    
Sbjct: 142 ETEEWKKRGDEQCMKGDFEDAIASYDKALEFKPNLHEAWYIRGLALGNLGRFEEAIASCD 201

Query: 142 RALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDL 197
           +AL++ P     +    G     LG+L  A  ++ +AL+  P+  EA     +AL  +  
Sbjct: 202 KALEIKPDLH-EVWNNRGRALDDLGRLEDAIASYDKALKFKPDKHEAWSSRGLALVKLGR 260

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
             +  A   K ++      E++    +AL+ L             E+   +        P
Sbjct: 261 LQDAIASYDKALKFKPDKHEVWNIRGLALDDLGR----------FEEAIASYDKALKFKP 310

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
               ++Y    + ++ G  E+A   +  +++     HE    +Y  G     LG F  AL
Sbjct: 311 DLHEAWYIRGLALYNLGRREEAIASWDKALEIKPDLHEV---WYNRGYALDDLGRFEEAL 367

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
           T++ K LE+ PD  E     G +   LG+ E+A     KA ++ P   +A+         
Sbjct: 368 TSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSYNKALELKPDYHEAW--------- 418

Query: 378 SDTGAALDAF---KTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 430
           ++ G ALD     + A     KA E  P   E  NN G      G  E A  S+  AL
Sbjct: 419 NNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIASYDKAL 476


>gi|333993657|ref|YP_004526270.1| putative slei family protein [Treponema azotonutricium ZAS-9]
 gi|333734825|gb|AEF80774.1| putative slei family protein [Treponema azotonutricium ZAS-9]
          Length = 865

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 150/334 (44%), Gaps = 42/334 (12%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG I  + +E ++ + +    ++K   +D + P+     G  L A G +E A++ ++
Sbjct: 145 YNNLGTIYDQLKEYDKAYGI----FHKGLNLDRNNPTLHFNYGVALEANGRLEDAANEYR 200

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             L +    +  +     + F +GR+  +L+ + R +   PS   A R  +G+ +   G+
Sbjct: 201 AALRSKPGWLEPMNNLGIIHFKQGRHDKALDVFNRIIDSDPSNAEA-RNNMGVIQADQGK 259

Query: 168 LGKARQAFQRALQLDPENVEALVAL------------AVMDLQ-----ANEAAGIR---- 206
             +A Q ++RA++ DP   +A+V L            AV++L+       ++A +R    
Sbjct: 260 NKEAVQNYRRAIEADPRYTKAVVNLERTLEESGDFANAVLELEKLVKLTPDSADLRDRLS 319

Query: 207 ----------KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
                     + +E+ + A E  P    AL  L      TG     +   E  LA+    
Sbjct: 320 GLYLKMERYPEALEQAKAALEWAPEDTQALRVLGAVQRITGNDEEAKAAFEKMLAID--- 376

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P     + +LA  +  + +Y++A    MA +    +P++       LG++  ++G+   A
Sbjct: 377 PGNYSFHLDLADIHFKRKEYKEAEDCIMAYLA--RRPNDRTAKLL-LGKLYAEMGNKAHA 433

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
           +  FE++ +I P++ E L A   +Y + G +EKA
Sbjct: 434 VQVFEELSKIDPNDTEALAATAELYKESGSVEKA 467



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 140/331 (42%), Gaps = 25/331 (7%)

Query: 244 QLTETALAVTN---HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN-KPHEFIFP 299
           +LTE A   T      P    +  N+A  Y  +G  + A     A V+ I+ +P +  F 
Sbjct: 55  KLTEAADEFTTLLAKNPQDIEALNNIAVIYRRQGKLQDA---LGALVEAIDLEPTKAEF- 110

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y +G +  ++G+ ++A   + KV+E+ P+       LG IY QL + +KA  +  K   
Sbjct: 111 HYNIGNIHKQMGNLKAASMAYAKVIELDPNYVSAYNNLGTIYDQLKEYDKAYGIFHKGLN 170

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 418
           +D  +     + G  L ++  G   DA    R  L+ K G    +E +NN+G+IHF++G 
Sbjct: 171 LDRNNPTLHFNYGVALEAN--GRLEDAANEYRAALRSKPGW---LEPMNNLGIIHFKQGR 225

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 478
            + A   F           ++DS         +  ++Q    +     +N    +E    
Sbjct: 226 HDKALDVFN---------RIIDSDPSNAEARNNMGVIQADQGKNKEAVQNYRRAIEADPR 276

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
               + NL R LE+  D   A +    ++    D  D   RL+ +         ++E   
Sbjct: 277 YTKAVVNLERTLEESGDFANAVLELEKLVKLTPDSADLRDRLSGLYLKMERYPEALEQAK 336

Query: 539 EALKVNGKYPNALSMLGDLE--LKNDDWVKA 567
            AL+   +   AL +LG ++    ND+  KA
Sbjct: 337 AALEWAPEDTQALRVLGAVQRITGNDEEAKA 367



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 114/307 (37%), Gaps = 44/307 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A+  Y K   +D +  S +   G +     E ++A   F   L  DR+N           
Sbjct: 127 ASMAYAKVIELDPNYVSAYNNLGTIYDQLKEYDKAYGIFHKGLNLDRNNPTLHFNYGVAL 186

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GR  D+   Y+ AL+  P     +   +G+  +K G+  KA   F R +  DP N E
Sbjct: 187 EANGRLEDAANEYRAALRSKPGWLEPMN-NLGIIHFKQGRHDKALDVFNRIIDSDPSNAE 245

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A   + V  +QA++    ++ ++  +RA E  P    A+                     
Sbjct: 246 ARNNMGV--IQADQGKN-KEAVQNYRRAIEADPRYTKAV--------------------- 281

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
                            NL R+    GD+  A L     VK      +      GL    
Sbjct: 282 ----------------VNLERTLEESGDFANAVLELEKLVKLTPDSADLRDRLSGL---Y 322

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
           LK+  +  AL   +  LE  P++ + L+ LG +    G  E+A+    K   IDP +   
Sbjct: 323 LKMERYPEALEQAKAALEWAPEDTQALRVLGAVQRITGNDEEAKAAFEKMLAIDPGNYSF 382

Query: 368 FIDLGEL 374
            +DL ++
Sbjct: 383 HLDLADI 389


>gi|344198703|ref|YP_004783029.1| hypothetical protein Acife_0495 [Acidithiobacillus ferrivorans SS3]
 gi|343774147|gb|AEM46703.1| Tetratricopeptide TPR_2 repeat-containing protein
           [Acidithiobacillus ferrivorans SS3]
          Length = 545

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 23/291 (7%)

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           LLL +    +A  A + VL    DN  ++     +   +   S++   +++AL + P+ P
Sbjct: 236 LLLYQNRYSEAEDAIRKVLSLMPDNAESIFVLGAISVGKKCLSEAEMAFRKALSIKPAYP 295

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
            A+ + +G+     G++ +A   F++AL + P   EAL+ L V       A G +  M++
Sbjct: 296 EAL-MNLGVMLSDQGRMDEAIGTFRKALIIKPGYREALMRLGV-------ALGYQGRMDE 347

Query: 212 ----MQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
               +++A  I   YP   M L  +  H    G+    E L   ALA+    P    +  
Sbjct: 348 AESTLRKALAIKSDYPEAIMNLGVILGH---EGRWEETETLLRQALAIK---PDYPEALM 401

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           NL  +   +G         +     I   H        LG    K G +  A T   + +
Sbjct: 402 NLGAALSKQGRCLDEAETILRQALAIQPDHADAL--VNLGATLNKQGRWDEAETILRQAV 459

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            I P++ + L  LG +  + G++++A+ +LR+A  I P    A ++LG +L
Sbjct: 460 AIKPEHADALINLGAVLSKQGRLDEAETILRQAIAIKPDQVDALVNLGVIL 510



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 151/374 (40%), Gaps = 33/374 (8%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  ++  A   D     TW     LL   G +++ASSA +  L  D++   A  G     
Sbjct: 110 ALYFFQTALSSDPKNGKTWANYMMLLYNTGRIQEASSALQQSLAIDKNFSLAFEGVYNQA 169

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            N   + D +E   R L    + P      +G    + G L  A +    AL ++  NV 
Sbjct: 170 LNLQCWRD-VENILRNLIAIKNSPSNEMAMLGEVLRRQGNLLDAERVLYDALNINENNVA 228

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQL 245
           AL  L+V+ L  N  +   +  + +++   + P  A ++  L       G+  L   E  
Sbjct: 229 ALHNLSVLLLYQNRYS---EAEDAIRKVLSLMPDNAESIFVLG--AISVGKKCLSEAEMA 283

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLG 304
              AL++    P    +  NL      +G  ++A G +  A +         I P Y   
Sbjct: 284 FRKALSIK---PAYPEALMNLGVMLSDQGRMDEAIGTFRKALI---------IKPGYREA 331

Query: 305 QVQLKL-----GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
            ++L +     G    A +   K L I  D  E +  LG I    G+ E+ + LLR+A  
Sbjct: 332 LMRLGVALGYQGRMDEAESTLRKALAIKSDYPEAIMNLGVILGHEGRWEETETLLRQALA 391

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 417
           I P   +A ++LG  L  S  G  LD    A T+L++A    P   + L N+G    ++G
Sbjct: 392 IKPDYPEALMNLGAAL--SKQGRCLD---EAETILRQALAIQPDHADALVNLGATLNKQG 446

Query: 418 EFESAHQSFKDALG 431
            ++ A    + A+ 
Sbjct: 447 RWDEAETILRQAVA 460


>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
 gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 832

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 159/398 (39%), Gaps = 50/398 (12%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   +++A ++   +   W  KG  L   G  E+A +AF   L+   D   A   +    
Sbjct: 377 AIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNAL 436

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + GRY ++L  + +AL+V P    A     G+   KLG   +A  AF +AL++ P+  +
Sbjct: 437 GDLGRYEEALAAFDQALKVKPDQHQAWN-NKGIALGKLGCDEEALAAFDQALKVKPDQHQ 495

Query: 188 ALV--------------ALAVMDL---------QANEAAGIRKG--------MEKMQRAF 216
           A                ALA  D          QA    GI  G        +    +A 
Sbjct: 496 AWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKAL 555

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           ++ P    A     N     G +       + AL V    P +   + N      + G Y
Sbjct: 556 KVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVK---PDQHQVWKNKGIVLVNLGCY 612

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
           ++A + +  ++K     HE   P+   G V + LG ++ AL  F++ L++ PD  E    
Sbjct: 613 QEALVAFDQALKVKPNDHE---PWSNKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNN 669

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF----IDLGELLISSDTGAALDAFKTART 392
            G + V LG+ ++A     +  K+ P   + +    I LG+L    +  AA D     +T
Sbjct: 670 KGIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGIALGKLGRYQEALAAFD-----QT 724

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           L  K  +    EV NN G+     G ++ A  +F   L
Sbjct: 725 LKVKPDQ---YEVWNNKGIALVNLGRYQEAITAFDQTL 759



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 26/365 (7%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           +++A ++   +   W  KG  L   G  E+A +AF   L+   D+  A   +     + G
Sbjct: 347 FDQALKVKSDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLG 406

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-- 189
           RY ++L  + + L+V P    A     G     LG+  +A  AF +AL++ P+  +A   
Sbjct: 407 RYEEALAAFDQTLKVKPDQHQAWN-NKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNN 465

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT--- 246
             +A+  L  +E A     +    +A ++ P    A N   N     G+    E+     
Sbjct: 466 KGIALGKLGCDEEA-----LAAFDQALKVKPDQHQAWN---NKGIALGKLGCDEEALAAF 517

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           + AL V +    +  ++ N   +    G  E+A   Y  ++K     HE    +   G  
Sbjct: 518 DQALKVKS---DQHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHE---AWKNKGNT 571

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
            + LG ++ AL  F++ L++ PD  +  K  G + V LG  ++A     +A K+ P D +
Sbjct: 572 LVNLGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHE 631

Query: 367 AFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
            + + G +L++      AL AF   +TL  K  +    EV NN G++    G ++ A  +
Sbjct: 632 PWSNKGIVLVNLGRYQEALIAFD--QTLKVKPDQ---YEVWNNKGIVLVNLGRYQEAITA 686

Query: 426 FKDAL 430
           F   L
Sbjct: 687 FDQTL 691



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 155/371 (41%), Gaps = 22/371 (5%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           H+  A   +++A ++   +   W  KG  L+     E+A +AF   L+   D+  A   +
Sbjct: 271 HYEEALAAFDQALKVKPDQHQAWYNKGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNK 330

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
             V    GRY ++L  + +AL+V      A     G    KLG+  +A  AF +AL++ P
Sbjct: 331 GNVLGKLGRYEEALAAFDQALKVKSDQHQAWN-NKGNALGKLGRYEEAIAAFDQALKVKP 389

Query: 184 ENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           ++ +A      A+ DL   E A     +    +  ++ P    A N   N     G++  
Sbjct: 390 DDHQAWNNKGNALGDLGRYEEA-----LAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEE 444

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
                + AL V    P +  ++ N   +    G  E+A   +  ++K     H+    + 
Sbjct: 445 ALAAFDQALKVK---PDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQ---AWN 498

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             G    KLG    AL  F++ L++  D  +     G    +LG+ E+A     KA K+ 
Sbjct: 499 NKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVK 558

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEF 419
           P   +A+ + G  L++      L  ++ A     +A +  P   +V  N G++    G +
Sbjct: 559 PDQHEAWKNKGNTLVN------LGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCY 612

Query: 420 ESAHQSFKDAL 430
           + A  +F  AL
Sbjct: 613 QEALVAFDQAL 623


>gi|326428775|gb|EGD74345.1| hypothetical protein PTSG_06355 [Salpingoeca sp. ATCC 50818]
          Length = 1374

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 157/374 (41%), Gaps = 68/374 (18%)

Query: 46   VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHE-----PSTWVGK---GQLLLAKG 97
            + Y  LG++     E +  F  AT+Y+ K+ +I + +     P T V     G++L  KG
Sbjct: 845  ITYDCLGQV----YEHKGEFNRATEYFEKSLKIKLEKLGDSNPGTVVTYNHLGRVLSQKG 900

Query: 98   EVEQASSAFK----IVLEADRDNVPA------LLGQACVEFNRGRYSDSLEFYKRALQVH 147
            E ++A+  F+    + L+   ++ P+       +GQ  V F +G YS +  ++KR+L++ 
Sbjct: 901  EYDRAAELFEKDLAVTLQMHGEDHPSTATTVDCIGQ--VYFYKGEYSTAETYFKRSLRIK 958

Query: 148  PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL---------------DPENVEALVAL 192
                G +          L  +   ++ F RAL+L                P     +  +
Sbjct: 959  QKVLGEMHRETATTYDNLANIALNKRDFVRALELFNKCLDIEKQVLGEQHPTVANTITNI 1018

Query: 193  AVMDLQANEAAGIRKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQ 244
              +  Q  +    ++ +  +++AF I        +P  A  ++ L   F   G      Q
Sbjct: 1019 GQVHTQLGQ---YQRALACLEQAFAIQTQTVGVVHPNAATTVDSLGTVFAEIGDQGRAIQ 1075

Query: 245  LTETAL-----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV----KEINKPH- 294
              E AL      V    P  + + Y +A+++ S G+ E+A  +Y  S+      + + H 
Sbjct: 1076 CFEQALNVWLDTVGEQHPNTAATLYEIAQAHRSMGNVEEAAQFYQRSLGIYTAVLGERHP 1135

Query: 295  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQ 346
            +    Y GL Q+ L  GD+ +AL   EK L+I        +PD   T     H +V  G 
Sbjct: 1136 DLATVYSGLTQLALDCGDYDTALRYLEKDLDISLDAHGEQHPDVGTTYAQYAHAHVGKGD 1195

Query: 347  IEKAQELLRKAAKI 360
            +++A E   K+  I
Sbjct: 1196 LDRALECGEKSLAI 1209



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 165/404 (40%), Gaps = 56/404 (13%)

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL-- 165
           +V E   D   AL     V F R  Y  + E   R L+V  +  G     I +   +L  
Sbjct: 541 VVGEQHMDTASALHSIGEVHFYRSEYDLAREHLHRCLRVRLATCGQQHPEIAMTYLELSD 600

Query: 166 -----GQLGKARQAFQRAL--------QLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
                G+  +A +    AL        +L P    A  +L V+   A+ A    K M   
Sbjct: 601 VYDSAGETARAHEYATTALAILQRTVGELHPYTANANHSLGVL---ASGAGDYDKAMAFA 657

Query: 213 QRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETAL-----AVTNHGPTK 259
           ++  EI        +P  A    +++      G +    + TETAL     +V  H P  
Sbjct: 658 EKDLEISRASLGDMHPDVAATYLHISEILDNKGDYTRARECTETALRILRASVGEHHPRT 717

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVK---EI--NKPHEFIFPYYGLGQVQLKLGDFR 314
           + +Y +  R Y S G Y+ A   Y  S++   E+  +  H     Y  +GQ+   +  + 
Sbjct: 718 ALAYRSYGRIYDSMGQYDDALEQYKTSLRITLEVLGDTNHFTAIVYNSMGQLYKAMCKYD 777

Query: 315 SALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQEL----LRKAAKID- 361
            A+  FEK LEI        +P    +   +G +Y   G+ ++A EL    LR A +++ 
Sbjct: 778 DAIACFEKDLEITRKLVGENHPSTGASYNTMGQVYDDKGEYDRAIELYEKDLRIALRVNG 837

Query: 362 ---PRDAQAFIDLGELL-ISSDTGAALDAF-KTARTLLKKAGEEVPIEVL--NNIGVIHF 414
              P  A  +  LG++     +   A + F K+ +  L+K G+  P  V+  N++G +  
Sbjct: 838 ESHPSTAITYDCLGQVYEHKGEFNRATEYFEKSLKIKLEKLGDSNPGTVVTYNHLGRVLS 897

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
           +KGE++ A + F+  L   + +   D  +    +D    +  +K
Sbjct: 898 QKGEYDRAAELFEKDLAVTLQMHGEDHPSTATTVDCIGQVYFYK 941


>gi|326434263|gb|EGD79833.1| hypothetical protein PTSG_10816 [Salpingoeca sp. ATCC 50818]
          Length = 864

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 62/370 (16%)

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAV------TNHGPTKSHSYYNLARSYHSKGDY 276
           A+  N +    F  G+     +L E  LA+      T H P  + S++NL + Y ++G+ 
Sbjct: 432 ALLCNRVGLVLFHFGERARATELYEKGLALEEQALGTYH-PDTATSHHNLGQVYFTRGEC 490

Query: 277 EKAGLYYMASVK-EINK-----PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY--- 327
           ++A   Y  S+   +N      PH  I   + LG+   +LGD+ SA+ NFE  L++    
Sbjct: 491 KRAIACYERSLHITLNTLGEKHPHTAIV-CHSLGEAYAELGDYHSAIGNFELCLQLTIST 549

Query: 328 -----PDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGEL 374
                P  C +L +LG IY ++G+  KA   L K  +I         P  A ++  LG+ 
Sbjct: 550 IGEKNPQVCASLHSLGRIYGKVGEYGKAVGYLEKDLEITLETVGEKHPSTAVSYSTLGQ- 608

Query: 375 LISSDTG---AALDAFKTARTL-LKKAGEE--VPIEVLNNIGVIHFEKGEFESAHQSFKD 428
            +  D G    A++ F  A  + L   GE+    +  LN++G  +  KGE E A     +
Sbjct: 609 -VYRDAGHYDKAIELFDKALQIKLDTVGEQNAETVRTLNDLGQAYNSKGEHERA----IE 663

Query: 429 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH-VELPWNKVTVLFNLA 487
            L  G+ L L      T++ D    +    +  L   +   G H   L   + T+   LA
Sbjct: 664 CLEKGLALAL------TFMGDTHQDVASLYN-SLGLVYGAKGMHDAALEMYEKTLGIELA 716

Query: 488 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 547
            L E+ H +V  S         Y +    Y R+  +A A+ NL  ++ +  E L  +  +
Sbjct: 717 TLGEE-HPSVGVS---------YHNIGHTYRRMGDLANAKKNLAHAVHIWMETLGPD--H 764

Query: 548 PNALSMLGDL 557
           P+  + L  L
Sbjct: 765 PHTRTGLNSL 774


>gi|158522428|ref|YP_001530298.1| hypothetical protein Dole_2417 [Desulfococcus oleovorans Hxd3]
 gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 762

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 14/291 (4%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W   G  L   G  E A  AF+  +  D +++ A      +    GR  ++++F++RAL+
Sbjct: 430 WSNLGMALQIAGNSEAALQAFQKAIALDPNHMEAHNNSGFILRELGRPKEAIKFFRRALE 489

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA--NEAA 203
           ++P+   A    +GL  + L  + +AR AF++ L+++P   +A   L V+ +Q   +EAA
Sbjct: 490 INPAYADA-HYNLGLAFFDLKDMAQARTAFEQTLRVNPLYSKAHNNLGVILMQEGDHEAA 548

Query: 204 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
                +   QRA +  P  A A N L    +  G         + AL      P  + + 
Sbjct: 549 -----VAAYQRALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTAD---PAYAGAA 600

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            NLAR    +   EK G       + ++K    +     L QV    G    A++ ++K 
Sbjct: 601 NNLARV---RQTIEKHGPAITELKQMLHKTPNDVDLSCRLAQVYQAAGMRYGAISQYQKA 657

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           L + P +  +L ALG +Y  +GQ  KA E  RK + + P +A  + +L  L
Sbjct: 658 LALQPGHGPSLNALGVLYAAMGQPAKAVECFRKLSALMPGNATIYYNLACL 708



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
           VT   PT +  + NL  +    G+ E A     A  K I      +  +   G +  +LG
Sbjct: 419 VTEKSPTLARPWSNLGMALQIAGNSEAA---LQAFQKAIALDPNHMEAHNNSGFILRELG 475

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
             + A+  F + LEI P   +    LG  +  L  + +A+    +  +++P  ++A  +L
Sbjct: 476 RPKEAIKFFRRALEINPAYADAHYNLGLAFFDLKDMAQARTAFEQTLRVNPLYSKAHNNL 535

Query: 372 GELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           G +L+   D  AA+ A++ A     +  +       NN+G+I +++G  + A   FK AL
Sbjct: 536 GVILMQEGDHEAAVAAYQRALKTDPRFAQAY-----NNLGIIAYQQGNPDQAASFFKKAL 590


>gi|118357157|ref|XP_001011828.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89293595|gb|EAR91583.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 494

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 136/317 (42%), Gaps = 30/317 (9%)

Query: 54  IETKQREKEEHFILATQY------------YNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 101
           I+  Q+E   HF    QY            +  A  I +   S  +  G +    G +E+
Sbjct: 167 IKNNQKEYYFHFYKGCQYREPGHENQAINCFLNALEIGLELYSPLINLGIIYSQMGRLEE 226

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP----SCPGAIRLG 157
           A S +  +L+    +  ALLG A +   RG   ++  F ++   ++     +C   +   
Sbjct: 227 AQSCYLKILKTHPQDWNALLGLAKLFTKRGMIEEAKFFLQKCSLIYNLDQDNCDDIVY-- 284

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
              C  +LG + +A   ++ AL+  P++V  L+ +  + L+      I K     ++  +
Sbjct: 285 ---CYCQLGMIEEAIIWYENALKFMPDSVFHLIIIGQLHLRN---GNIEKSKIFFEKILK 338

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           I P  +  LN L   ++  G +       + +  +    P    ++ NL   Y ++G  E
Sbjct: 339 IRPNQSYILNNLGFAYYLEGDYSKAISYYQQSQEIN---PNVYDTFNNLGLIYQNQGFAE 395

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A   Y   VK IN    F      LG +  ++G+F +A+  + +  E  P   E  K+L
Sbjct: 396 QAIQQY---VKAINILPNFAEALNNLGSIYFQIGEFGTAIYYYMEAQEADPQFLEPYKSL 452

Query: 338 GHIYVQLGQIEKAQELL 354
           G+IY ++GQ+E+A  + 
Sbjct: 453 GYIYKKIGQVEEANNIF 469



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 12/258 (4%)

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHP--SCPGAIRLGIGLCRYKLGQLGKARQAFQR 177
           LLGQ  + + +G++ D+L+ +   LQ++   S    I   IG    +     +A + +Q+
Sbjct: 5   LLGQ--IFYKQGKFQDALQTFNELLQINTFKSNVPYIYNTIGSIYEQQNMKDQAIKQYQK 62

Query: 178 ALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 237
           AL+ +P + EAL+ L   +L   +   +++  E +++A ++ P C       A  +  + 
Sbjct: 63  ALENEPSDYEALINLG--NLYFFDKNMVKEANECIKKALDLNPNCFFTWYKAAKFYDNSN 120

Query: 238 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
           Q+       + AL++    P  S   Y+LA+ YH  G+ ++A  +    +K  N   E+ 
Sbjct: 121 QNQEAIYNYKKALSIF---PRDSEILYSLAQIYHKIGNNQEAIKFEEKVIK--NNQKEYY 175

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           F +Y   Q + + G    A+  F   LEI  +    L  LG IY Q+G++E+AQ    K 
Sbjct: 176 FHFYKGCQYR-EPGHENQAINCFLNALEIGLELYSPLINLGIIYSQMGRLEEAQSCYLKI 234

Query: 358 AKIDPRDAQAFIDLGELL 375
            K  P+D  A + L +L 
Sbjct: 235 LKTHPQDWNALLGLAKLF 252



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 11/167 (6%)

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           ++   Y   G  E+A ++Y  ++K +  P   +F    +GQ+ L+ G+   +   FEK+L
Sbjct: 281 DIVYCYCQLGMIEEAIIWYENALKFM--PDS-VFHLIIIGQLHLRNGNIEKSKIFFEKIL 337

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL 384
           +I P+    L  LG  Y   G   KA    +++ +I+P     F +LG  LI  + G A 
Sbjct: 338 KIRPNQSYILNNLGFAYYLEGDYSKAISYYQQSQEINPNVYDTFNNLG--LIYQNQGFAE 395

Query: 385 DAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA 429
            A +       KA   +P   E LNN+G I+F+ GEF +A   + +A
Sbjct: 396 QAIQQYV----KAINILPNFAEALNNLGSIYFQIGEFGTAIYYYMEA 438



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 8/103 (7%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEI--YPDNCETL-KALGHIYVQLGQIEKAQELLRKAAK 359
           LGQ+  K G F+ AL  F ++L+I  +  N   +   +G IY Q    ++A +  +KA +
Sbjct: 6   LGQIFYKQGKFQDALQTFNELLQINTFKSNVPYIYNTIGSIYEQQNMKDQAIKQYQKALE 65

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 402
            +P D +A I+LG L          +  K A   +KKA +  P
Sbjct: 66  NEPSDYEALINLGNLYFFDK-----NMVKEANECIKKALDLNP 103


>gi|146166829|ref|XP_001016119.2| TPR Domain containing protein [Tetrahymena thermophila]
 gi|146145287|gb|EAR95874.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 993

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 36/338 (10%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LG YY  + K+E            + +YY  A +I   +       G L L    +E A 
Sbjct: 608 LGKYYFAIQKLEE-----------SIKYYLVAQKIKPSDYEINFNLGILYLKMENLENAE 656

Query: 104 SAFKIVLEAD--RDNVPALLGQACVEFNRGR-----YSDSLEFYKRALQVHPSCPGAIRL 156
             F  VL+A     NV   LGQ  +  N+ +     +  ++EF  +  Q  P   G + L
Sbjct: 657 QYFLKVLQAQVQEQNVFFYLGQVYLNQNKMKQAEYNFLKAVEFDPQEFQ-WPKFIGDLYL 715

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
                     +  +AR  +Q+AL L P + E+L+ L  +  + N +  I+  + +     
Sbjct: 716 S-------FKKFEEARFYYQKALNLKPSSEESLLKLIHIYYKCNISQEIQPFLIEF---L 765

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           E  P    A+  L  HF   G+    +Q    AL +    P    +  +L +SY   G+ 
Sbjct: 766 EKNPENLQAIILLGGHFDDIGKFTEAQQYYLQALQIN---PDSFKAICHLIQSYIRTGEI 822

Query: 277 EKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
           E A  Y+   +K +I+K  E    Y  +G +Q++      ++ +F K LEI P N +T  
Sbjct: 823 ENAKYYFEKLLKLKISKDEE---QYINIGILQVQFQQIEESIQSFLKALEINPQNSQTHY 879

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
            L   Y ++G+ E +++   KA +I+P   +A   LG+
Sbjct: 880 KLADCYEKIGRNEDSKKYYLKAIEINPEFEEALYQLGD 917



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 132/329 (40%), Gaps = 43/329 (13%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV--PALLGQAC 125
           A QY+ K  +  + E + +   GQ+ L + +++QA   F   +E D      P  +G   
Sbjct: 655 AEQYFLKVLQAQVQEQNVFFYLGQVYLNQNKMKQAEYNFLKAVEFDPQEFQWPKFIGDLY 714

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
           + F +  + ++  +Y++AL + PS   ++ L +    YK     + +      L+ +PEN
Sbjct: 715 LSFKK--FEEARFYYQKALNLKPSSEESL-LKLIHIYYKCNISQEIQPFLIEFLEKNPEN 771

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG-------- 237
           ++A++ L       ++     +  +   +A +I P    A+ +L   +  TG        
Sbjct: 772 LQAIILLGG---HFDDIGKFTEAQQYYLQALQINPDSFKAICHLIQSYIRTGEIENAKYY 828

Query: 238 ------------------------QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
                                   Q   +E+  ++ L      P  S ++Y LA  Y   
Sbjct: 829 FEKLLKLKISKDEEQYINIGILQVQFQQIEESIQSFLKALEINPQNSQTHYKLADCYEKI 888

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G  E +  YY+ ++ EIN   EF    Y LG    K      A   ++KVL I P     
Sbjct: 889 GRNEDSKKYYLKAI-EINP--EFEEALYQLGDYYFKNCKPVEAQKYYQKVLSINPQQLNC 945

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDP 362
              L +I+ +  Q E A+    K  KIDP
Sbjct: 946 HIKLAYIFQKFNQFEDAKYHFHKVLKIDP 974



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 144/318 (45%), Gaps = 49/318 (15%)

Query: 99  VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
           +E A + F+  ++ D +++ A    A +  + G + ++ +   +AL+++ S    +   +
Sbjct: 100 IEDAKNCFQEAIKIDPNSILAHQFLADIYEDSGNFLEAEKHLLKALEIN-SNQMHLNYRL 158

Query: 159 GLCRYKLGQLGKARQAF------QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           G+   K GQL K+++ F      ++AL++  ++ ++ + L        +   I++  +  
Sbjct: 159 GVLYQKTGQLEKSKKFFLICEGHEKALKMKSQDQQSCIQLGKF---YKKIGKIKEAAQFF 215

Query: 213 QRAFEIYPYCAMALNY-------------------------LANHF---FFTGQHFL-VE 243
           Q+A EI P+    LNY                            HF   +  G+ +L ++
Sbjct: 216 QKADEIQPFQDSELNYNLGLLFCQAKQFQESIKYLLKYKEKYPQHFNTNYVLGEAYLQLK 275

Query: 244 QLTETALAVTNH---GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           QL E+ +         P  +   ++L   Y++    EKA  Y++  V++IN P +    +
Sbjct: 276 QLKESEICFLQALEIEPQSADVCFSLGLIYYNLKKKEKAYKYFL-KVQKIN-PKDLDSAF 333

Query: 301 YGLGQVQLKLGDFRS--ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
           Y LG   L  GD +   A+  F+KVLEI P   E    LG     +G++E+A+E  +KA 
Sbjct: 334 Y-LGC--LYQGDNKQEDAICCFQKVLEIIPQCFEANFYLGFSLDLVGKVEEAKEQFQKAF 390

Query: 359 KIDPRDAQAFIDLGELLI 376
            I P+  + +  LG   +
Sbjct: 391 VIKPQSVKEYAQLGNFYL 408



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 165/414 (39%), Gaps = 76/414 (18%)

Query: 84  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           S ++G    L+  G  E A   +  VLE   + +   L    +  N     +S  F K+A
Sbjct: 464 SLYLGSVYELI--GRSEDAKKHYFKVLELQPNLLYVNLQLGILYMNEKNEKESESFLKKA 521

Query: 144 LQVHPS-CPGAIRLGIGLC---RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 199
             + P+     I LG+      R   G    A++ FQ+AL+++P + +  + L ++ L  
Sbjct: 522 YNIDPNNFDTNINLGLFYLYIERQNEGNDEIAKKYFQKALEIEPLSEDGFIYLGIIYLNQ 581

Query: 200 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
           N    +++    + +A++I P  +   N     ++F  Q   +E+  +  L      P+ 
Sbjct: 582 N---MLKEAEFYLTKAYQINP-NSFKCNSQLGKYYFAIQK--LEESIKYYLVAQKIKPSD 635

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYM----ASVKEIN------------------------ 291
               +NL   Y    + E A  Y++    A V+E N                        
Sbjct: 636 YEINFNLGILYLKMENLENAEQYFLKVLQAQVQEQNVFFYLGQVYLNQNKMKQAEYNFLK 695

Query: 292 ----KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 347
                P EF +P + +G + L    F  A   ++K L + P + E+L  L HIY +    
Sbjct: 696 AVEFDPQEFQWPKF-IGDLYLSFKKFEEARFYYQKALNLKPSSEESLLKLIHIYYKCNIS 754

Query: 348 EKAQELLRKAAKIDPRDAQAFIDLGELL--ISSDTGA------AL----DAFKTARTLLK 395
           ++ Q  L +  + +P + QA I LG     I   T A      AL    D+FK    L++
Sbjct: 755 QEIQPFLIEFLEKNPENLQAIILLGGHFDDIGKFTEAQQYYLQALQINPDSFKAICHLIQ 814

Query: 396 ---KAGE------------EVPI----EVLNNIGVIHFEKGEFESAHQSFKDAL 430
              + GE            ++ I    E   NIG++  +  + E + QSF  AL
Sbjct: 815 SYIRTGEIENAKYYFEKLLKLKISKDEEQYINIGILQVQFQQIEESIQSFLKAL 868



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 141/363 (38%), Gaps = 58/363 (15%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LG +Y  +GKI+            A Q++ KA  I   + S       LL  + +  Q  
Sbjct: 198 LGKFYKKIGKIKE-----------AAQFFQKADEIQPFQDSELNYNLGLLFCQAK--QFQ 244

Query: 104 SAFKIVLEADRD-----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
            + K +L+         N   +LG+A ++  + + S+    + +AL++ P     +   +
Sbjct: 245 ESIKYLLKYKEKYPQHFNTNYVLGEAYLQLKQLKESEIC--FLQALEIEPQ-SADVCFSL 301

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           GL  Y L +  KA + F +  +++P+++++   L  +    N+       +   Q+  EI
Sbjct: 302 GLIYYNLKKKEKAYKYFLKVQKINPKDLDSAFYLGCLYQGDNKQ---EDAICCFQKVLEI 358

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
            P C  A  YL       G+   VE+  E         P     Y  L   Y   G   +
Sbjct: 359 IPQCFEANFYLGFSLDLVGK---VEEAKEQFQKAFVIKPQSVKEYAQLGNFYLQFGRKYE 415

Query: 279 AGLYYMASVKEINKPHEF-----------IFP---------------YYG---LGQVQLK 309
           A   ++      N P EF           +F                +Y    LG V   
Sbjct: 416 AQKCFIKGFN--NNPIEFESFISQNVDSQLFTNLKVQKDLDKINEKNFYSSLYLGSVYEL 473

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           +G    A  ++ KVLE+ P+       LG +Y+     ++++  L+KA  IDP +    I
Sbjct: 474 IGRSEDAKKHYFKVLELQPNLLYVNLQLGILYMNEKNEKESESFLKKAYNIDPNNFDTNI 533

Query: 370 DLG 372
           +LG
Sbjct: 534 NLG 536


>gi|254413697|ref|ZP_05027466.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196179294|gb|EDX74289.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 320

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 12/225 (5%)

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
           + +E   +A + YP  A++     N FF    +  V Q    AL +    P+   +Y N 
Sbjct: 37  QAIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQEVLQNYNDALKLN---PSYPQAYNNR 93

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
             +Y+  GDY +A   Y  +VK  N  +E    YY  G     L +++ AL +F   +++
Sbjct: 94  GNTYYLLGDYHQAIADYTQAVK-CNPKYER--AYYNRGNAYYNLSEYKQALLDFSYAIQL 150

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE-LLISSDTGAALD 385
            PD  E+   LG+ Y+ L Q ++A +   KA  I+P  AQA+ + G      ++   A+ 
Sbjct: 151 NPDYAESYNNLGNTYIALNQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNNVVQAIS 210

Query: 386 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +  A TL     +    E  NN G  ++   +++ A +++  AL
Sbjct: 211 NYAKAITL-----DSQNHEAYNNRGNAYYALQKYKEALKNYDQAL 250



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 128 FNRGR-------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           +NRG        Y + L+ Y  AL+++PS P A     G   Y LG   +A   + +A++
Sbjct: 57  YNRGNCFFALNDYQEVLQNYNDALKLNPSYPQAYN-NRGNTYYLLGDYHQAIADYTQAVK 115

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            +P+   A           +E    ++ +     A ++ P  A + N L N +    Q+ 
Sbjct: 116 CNPKYERAYYNRGNAYYNLSE---YKQALLDFSYAIQLNPDYAESYNNLGNTYIALNQYQ 172

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
                 + A+A+    P  + +Y N   SY+   +  +A   Y  ++   ++ HE    Y
Sbjct: 173 QAIDSYDKAIAIN---PNYAQAYNNRGNSYYYLNNVVQAISNYAKAITLDSQNHE---AY 226

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
              G     L  ++ AL N+++ L + P++ E+    G + ++L Q +KA   L++A K+
Sbjct: 227 NNRGNAYYALQKYKEALKNYDQALTLCPNHIESYYNRGLVQIKLKQKQKAIADLQQAVKL 286


>gi|391328604|ref|XP_003738777.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit
           [Metaseiulus occidentalis]
          Length = 1034

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 163/391 (41%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  K+R    H   A   Y +A R+       ++     L+A G++EQA  A+ 
Sbjct: 102 YSNLGNV-LKERG---HLQEALDNYRQAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYI 157

Query: 108 IVLEADRDNVPALLGQACVEFNRG-------RYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
             L+ + D         CV  + G       R  ++   Y +A++  P+   A    +G 
Sbjct: 158 SALQYNPD-------LYCVRSDLGNLLKALSRLDEAKACYLKAIETCPTFAVAWS-NLGC 209

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
                G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P
Sbjct: 210 VFNSQGEVWLAIHHFEKAVALDPHFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSP 266

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 280
             A+    LA  ++  G   L++   ET        P    +Y NLA +   KG  +++ 
Sbjct: 267 NNAVVHGNLACVYYEQG---LIDMAIETYKRAIELQPNFPDAYCNLANALKEKGHVQESE 323

Query: 281 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
             Y  +++ +    + +     L  ++ + G    A   + K L++YP+       L  +
Sbjct: 324 KCYNTALRLMPSHADSL---NNLANIKREQGQIEDATKLYAKALDVYPEFAAAHSNLASV 380

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++ +A    R+A +I P  A A+ ++G  L    D   A+  +  A T+      
Sbjct: 381 LQQQGKLNEALMHYREAIRISPTFADAYSNMGNTLKELGDIQGAMQCYSRAITINPAFA- 439

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A QS++ AL
Sbjct: 440 ----DAHSNLASIHKDSGNIPEAIQSYRTAL 466



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 133/338 (39%), Gaps = 48/338 (14%)

Query: 38  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
           I       V ++ LG +   Q E      LA  ++ KA  +D H    ++  G +L    
Sbjct: 194 IETCPTFAVAWSNLGCVFNSQGE----VWLAIHHFEKAVALDPHFLDAYINLGNVLKEAR 249

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
             ++A +A+   L    +N       ACV + +G    ++E YKRA+++ P+ P A    
Sbjct: 250 IFDRAVAAYLRALSLSPNNAVVHGNLACVYYEQGLIDMAIETYKRAIELQPNFPDA-YCN 308

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +     + G + ++ + +  AL+L P + ++L  LA +     E   I    +   +A +
Sbjct: 309 LANALKEKGHVQESEKCYNTALRLMPSHADSLNNLANIK---REQGQIEDATKLYAKALD 365

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           +YP  A A                                   HS  NLA     +G   
Sbjct: 366 VYPEFAAA-----------------------------------HS--NLASVLQQQGKLN 388

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A ++Y  +++       F   Y  +G    +LGD + A+  + + + I P   +    L
Sbjct: 389 EALMHYREAIR---ISPTFADAYSNMGNTLKELGDIQGAMQCYSRAITINPAFADAHSNL 445

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
             I+   G I +A +  R A ++ P    A+ +L   L
Sbjct: 446 ASIHKDSGNIPEAIQSYRTALRLKPEFPDAYCNLAHCL 483



 Score = 46.6 bits (109), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 162/403 (40%), Gaps = 42/403 (10%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y  LG V  + G  + AL N+ + + + PD  +    L    V  G +E+A +    A +
Sbjct: 102 YSNLGNVLKERGHLQEALDNYRQAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYISALQ 161

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKG 417
            +P       DLG LL       AL     A+    KA E  P   +  +N+G +   +G
Sbjct: 162 YNPDLYCVRSDLGNLL------KALSRLDEAKACYLKAIETCPTFAVAWSNLGCVFNSQG 215

Query: 418 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHR-FENDGNHVEL 475
           E   A   F+ A+        LD     + +DA  ++    K+ ++F R        + L
Sbjct: 216 EVWLAIHHFEKAVA-------LDP----HFLDAYINLGNVLKEARIFDRAVAAYLRALSL 264

Query: 476 PWNKVTVLFNLARLL-EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 534
             N   V  NLA +  EQ    +A     R I  +  ++ DAY  LA   K + ++Q S 
Sbjct: 265 SPNNAVVHGNLACVYYEQGLIDMAIETYKRAIELQ-PNFPDAYCNLANALKEKGHVQESE 323

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY 594
           +  N AL++   + ++L+ L +++ +      A + +  A D       Y   +  + N 
Sbjct: 324 KCYNTALRLMPSHADSLNNLANIKREQGQIEDATKLYAKALDV------YPEFAAAHSNL 377

Query: 595 FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 654
            + L+ + +        L +A   Y   I    +   A +  G  L E G    +   ++
Sbjct: 378 ASVLQQQGK--------LNEALMHYREAIRISPTFADAYSNMGNTLKELGDIQGAMQCYS 429

Query: 655 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
           +     + ++     D   NLA ++   GN   A++ Y+  LR
Sbjct: 430 R-----AITINPAFADAHSNLASIHKDSGNIPEAIQSYRTALR 467


>gi|218246150|ref|YP_002371521.1| hypothetical protein PCC8801_1300 [Cyanothece sp. PCC 8801]
 gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 878

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 193/434 (44%), Gaps = 44/434 (10%)

Query: 6   FKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNA-LGVYYTYLGKIETKQREKEEH 64
           +KQGK+E+                 A   Y++   LN  L   Y  LG   + Q +++E 
Sbjct: 244 YKQGKLEE-----------------AIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDE- 285

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 124
              A   Y KA +++ +    +   G  L  +G+ ++A +A++  ++ + +   A     
Sbjct: 286 ---AIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLG 342

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDP 183
               ++G+  +++  Y++A+Q++P+   A   LG+ L     G+  +A  A+Q+A+QL+P
Sbjct: 343 VALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALS--DQGKRDEAIAAYQKAIQLNP 400

Query: 184 ENVEALVALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
               A   L V    A    G R + +   Q+A ++ P  A A N L        Q    
Sbjct: 401 NFALAYNNLGV----ALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLG--LALRNQGKRD 454

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           E +T    A+    P  + +Y NL  + +S+G  E+A   Y    K I     F   Y  
Sbjct: 455 EAITAYQKAIQ-LNPNFALAYNNLGNALYSQGKREEAIAAYQ---KAIQLNPNFALAYNN 510

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG      G    A+  ++K +++ P+       LG+     G++ +A    +KA +++P
Sbjct: 511 LGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNP 570

Query: 363 RDAQAFIDLGELLISSDTGA---ALDAFKTARTLLKKAG-EEVPIEVL--NNIGVIHFEK 416
             A A+ +LG  L   D G    A+ A++ A +L +           L  NN+G+++  +
Sbjct: 571 NFALAYNNLGNAL--KDQGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPQ 628

Query: 417 GEFESAHQSFKDAL 430
           G+ E A + ++ AL
Sbjct: 629 GKLEEALREYEAAL 642



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 172/394 (43%), Gaps = 50/394 (12%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y KA ++D ++ + +   G  L  +G++E+A +A++  ++ + +   A         ++G
Sbjct: 222 YQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQG 281

Query: 132 RYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           +  +++  Y++A+Q++P+   A   LG+ L     G+  +A  A+Q+A+QL+P    A  
Sbjct: 282 KRDEAIAAYQKAIQLNPNLAEAYNNLGVALS--DQGKRDEAIAAYQKAIQLNPNFALAYN 339

Query: 191 ALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ--------HFL 241
            L V    A    G R + +   Q+A ++ P  A+A N L       G+           
Sbjct: 340 NLGV----ALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKA 395

Query: 242 VEQLTETALAVTNHG-----------------------PTKSHSYYNLARSYHSKGDYEK 278
           ++     ALA  N G                       P  +++Y NL  +  ++G  ++
Sbjct: 396 IQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDE 455

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A   Y    K I     F   Y  LG      G    A+  ++K +++ P+       LG
Sbjct: 456 AITAYQ---KAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLG 512

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 398
           +     G+ ++A    +KA +++P  A A+ +LG  L  SD G   +A  T     +KA 
Sbjct: 513 NALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNAL--SDQGKLNEAIAT----YQKAI 566

Query: 399 EEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
           +  P   L  NN+G    ++G+   A  +++ AL
Sbjct: 567 QLNPNFALAYNNLGNALKDQGKLNEAIAAYQKAL 600



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 50/301 (16%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G+Y+++   ++R +++ P+   A    +G   Y  G+L +A  A+Q+A+QL+P + +A  
Sbjct: 43  GKYTEAEAIFRRVIELDPNLADAYN-NLGNALYYQGKLDEAIAAYQKAIQLNPNDADAY- 100

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
                    N          K++ A   Y   A+ LN                       
Sbjct: 101 ---------NNLGNALSDQGKLEEAIAAY-QKAIQLN----------------------- 127

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
                 P  + +YYNL  +   +G  E+A   Y    K I     F   YY LG      
Sbjct: 128 ------PNYADAYYNLGIALSDQGKLEEAIAAYQ---KAIQLNPNFTQAYYNLGIALSDQ 178

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G    A+  ++K +++ P+  +    LG+     G++++A    +KA ++DP DA A+ +
Sbjct: 179 GKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNN 238

Query: 371 LGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           LG  L        A+ A++ A  L          E  NN+GV   ++G+ + A  +++ A
Sbjct: 239 LGAALYKQGKLEEAIAAYQKAIQLNPNLA-----EAYNNLGVALSDQGKRDEAIAAYQKA 293

Query: 430 L 430
           +
Sbjct: 294 I 294



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 165/364 (45%), Gaps = 24/364 (6%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y KA +++ ++   +   G  L  +G++E+A +A++  ++ + +   A         ++G
Sbjct: 86  YQKAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQG 145

Query: 132 RYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           +  +++  Y++A+Q++P+   A   LGI L     G+L +A  A+Q+A+QL+P   +A  
Sbjct: 146 KLEEAIAAYQKAIQLNPNFTQAYYNLGIALS--DQGKLEEAIAAYQKAIQLNPNYADAYY 203

Query: 191 AL--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
            L  A+ D        + + +   Q+A ++ P  A A N L    +  G+   +E+    
Sbjct: 204 NLGNALFD-----QGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGK---LEEAIAA 255

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
                   P  + +Y NL  +   +G  ++A   Y    K I         Y  LG    
Sbjct: 256 YQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQ---KAIQLNPNLAEAYNNLGVALS 312

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
             G    A+  ++K +++ P+       LG      G+ ++A    +KA +++P  A A+
Sbjct: 313 DQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAY 372

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSF 426
            +LG  L  SD G   +A        +KA +  P   L  NN+GV    +G+ + A  ++
Sbjct: 373 NNLGVAL--SDQGKRDEAIAA----YQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAY 426

Query: 427 KDAL 430
           + A+
Sbjct: 427 QKAI 430



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 10/130 (7%)

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G+   K+G +  A   F +V+E+ P+  +    LG+     G++++A    +KA +++P 
Sbjct: 36  GRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPN 95

Query: 364 DAQAFIDLGELLISSDTGA---ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
           DA A+ +LG  L  SD G    A+ A++ A  L          +   N+G+   ++G+ E
Sbjct: 96  DADAYNNLGNAL--SDQGKLEEAIAAYQKAIQLNPNYA-----DAYYNLGIALSDQGKLE 148

Query: 421 SAHQSFKDAL 430
            A  +++ A+
Sbjct: 149 EAIAAYQKAI 158


>gi|146182723|ref|XP_001025109.2| TPR Domain containing protein [Tetrahymena thermophila]
 gi|146143748|gb|EAS04864.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 2120

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 155/353 (43%), Gaps = 51/353 (14%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K++ F  A +YY++A  +D +  +  VGKG  L  +G+ E A   ++  +  +    P  
Sbjct: 209 KQKEFDKAIEYYDQAMEVDTNNINILVGKGDCLRKQGQYEAALECYEYGMNLN----PPH 264

Query: 121 LGQACVEFNRG-------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
             Q  + FN+G       +  +++E Y +A  + P  P        L  Y LG+L +   
Sbjct: 265 KYQFRILFNKGNIYKCMGKNKEAIECYSKASLLDPQNPNTY-FNKALAFYSLGELDEVID 323

Query: 174 AFQRALQLDPENVEALV--ALAVMDL-----------QANEAAG------IRKG-----M 209
            + R ++ +P +  AL+   +A+ ++           +A+E         + KG     +
Sbjct: 324 NYSRVVKQNPRDQHALLNKGMALREIGEFGPAVECFVKASEMKARNARQYLNKGNALFQI 383

Query: 210 EKMQRAFEIYPYCAMALNYLANHFF--FTGQHFLVEQLTETALAVTNHG------PTKSH 261
           +K++ A   Y    M    + N+F+  F     ++ +L  T   +  +       P    
Sbjct: 384 DKLEDALICYKKAIM----IENNFYEAFLNMGVVLNELGRTVEEIECYKKVLELKPDDVK 439

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           + YN A +    G+ E++   +   +K IN   + +  Y   G  Q  LG F+ +  +++
Sbjct: 440 ALYNQAVALRELGEVEESAKQFDKVIK-INP--KMVNAYINKGLSQYILGQFKESYDSYK 496

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           + L+I  ++ E+   +     Q+ +  KA +LL KA KI P + + +  +GE+
Sbjct: 497 EALKIDNNSIESYINMSQCLRQMKKSNKALKLLMKALKISPNNFELYFQIGEI 549



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 135/308 (43%), Gaps = 10/308 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y+KAS +D   P+T+  K     + GE+++    +  V++ +  +  ALL +    
Sbjct: 287 AIECYSKASLLDPQNPNTYFNKALAFYSLGELDEVIDNYSRVVKQNPRDQHALLNKGMAL 346

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G +  ++E + +A ++         L  G   +++ +L  A   +++A+ ++    E
Sbjct: 347 REIGEFGPAVECFVKASEMKARNARQY-LNKGNALFQIDKLEDALICYKKAIMIENNFYE 405

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A + + V+    NE     + +E  ++  E+ P    AL   A      G+   VE+  +
Sbjct: 406 AFLNMGVV---LNELGRTVEEIECYKKVLELKPDDVKALYNQAVALRELGE---VEESAK 459

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
               V    P   ++Y N   S +  G ++++   Y  ++K  N   E    Y  + Q  
Sbjct: 460 QFDKVIKINPKMVNAYINKGLSQYILGQFKESYDSYKEALKIDNNSIE---SYINMSQCL 516

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            ++     AL    K L+I P+N E    +G IY Q+  I+KA E    + +++P  ++A
Sbjct: 517 RQMKKSNKALKLLMKALKISPNNFELYFQIGEIYKQILNIKKALEYYSYSIQLNPIYSEA 576

Query: 368 FIDLGELL 375
               G  L
Sbjct: 577 IFQKGVCL 584


>gi|427719490|ref|YP_007067484.1| hypothetical protein Cal7507_4274 [Calothrix sp. PCC 7507]
 gi|427351926|gb|AFY34650.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 340

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 31/313 (9%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+++ A   ++ V++   D  PA   +    F  G  + ++  Y +A+Q+ P  P A   
Sbjct: 33  GDIKAAIIDYEKVIQLQPDLTPAYNNRGLARFQLGDINGAISDYNQAIQLQPDSPLAYN- 91

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
             GL R++LG + +A   + +A++L+P   EA        ++  +   I  G+    RA 
Sbjct: 92  NRGLARFELGDIKEAISDYNQAIKLEPNYAEAYNNRGNAYVKLGD---INAGIFDYDRAI 148

Query: 217 EIYPYCAMALNYLANHF-FFTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLARS 269
           +  P          NH  F+  + +   +L +    + ++       P  + +Y+N   +
Sbjct: 149 QFQP----------NHAEFYNNRGYARFELGDINAGIFDYDRAIELQPDLASAYHNRGYA 198

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
             S G+ ++A   Y    + I         YYG G VQL LG+++ A  +F++ +++ PD
Sbjct: 199 RFSLGEKQEA---YADCDRAIQLQPSNPKAYYGRGTVQLSLGEYQEAFADFDRAIQLQPD 255

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG----ELLISSDTGAALD 385
                   G    QL   E A     +A  +     +A+ + G    EL    D  AA++
Sbjct: 256 YYIAYFNRGFSRYQLDDNEGAISDYSQAISLHSNYPKAYFNRGLAKNEL---GDKQAAIE 312

Query: 386 AFKTARTLLKKAG 398
            F+TA  L ++ G
Sbjct: 313 DFQTAANLYQQQG 325



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 6/120 (5%)

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G  + +LGD   A++++ + +++ PD+       G    +LG I++A     +A K++P 
Sbjct: 60  GLARFQLGDINGAISDYNQAIQLQPDSPLAYNNRGLARFELGDIKEAISDYNQAIKLEPN 119

Query: 364 DAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
            A+A+ + G   +   D  A +  F   R +  +       E  NN G   FE G+  + 
Sbjct: 120 YAEAYNNRGNAYVKLGDINAGI--FDYDRAIQFQPNHA---EFYNNRGYARFELGDINAG 174


>gi|326432879|gb|EGD78449.1| tetratricopeptide TPR_2 [Salpingoeca sp. ATCC 50818]
          Length = 920

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 99/455 (21%), Positives = 184/455 (40%), Gaps = 72/455 (15%)

Query: 43  ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM--------HEPSTWVGKGQLLL 94
           +  + Y+ LG++   + + +     A  YY K  +I +        H  +T+   G +  
Sbjct: 376 STAITYSSLGQVYCNKGDYDR----AIHYYEKCLQIQLDTLEEKHPHTATTYNNLGHVYC 431

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR--------GRYSDSLEFYKRALQV 146
           +K + ++A   +   L+   D +     +    +N         G Y  +LE+ +++LQ+
Sbjct: 432 SKCDYDRAIHYYDKCLQIQLDTLGEKHAETARTYNNLGGVHCSMGEYDRALEYCQQSLQI 491

Query: 147 --------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV---EALVALAVM 195
                   HPS    I   +G   Y  G   +A   +++ LQ+  + +       A    
Sbjct: 492 YLDTWGEKHPS-TATIHNNLGQVYYSKGDYDRAIHYYEKCLQIQLDTLGEKHPHTAGTYN 550

Query: 196 DL-QANEAAG-IRKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQ-----HF 240
           +L Q  E+ G   + +   ++  +I        +P  A     L   +   G      H+
Sbjct: 551 NLGQVYESKGDYDRALAYFEKCLQIQLDTLGEKHPSTATTCGNLGQVYRSKGDYDRAIHY 610

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPH-E 295
             + L      +    P  + +Y NL + Y SKGDY+ A  YY  S++     + + H +
Sbjct: 611 YEKCLQIQLDTLGEKHPHTATTYGNLGQVYKSKGDYDLATHYYQKSLQIKLDTLGEKHPD 670

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQI 347
               Y  LGQV    G++  A+  +EK L+I        +PD   T   LG +Y   G+ 
Sbjct: 671 TATTYNNLGQVYNSKGEYDRAIHYYEKSLQIKLDTLGEKHPDTATTYNNLGQVYRSKGEY 730

Query: 348 EKAQELLRKAAKID--------PRDAQAFIDLGELLIS-SDTGAALDAF-KTARTLLKKA 397
           ++A E  +K   I         P  A  + +LG +  S  +   A+  + K+ +  L   
Sbjct: 731 DRALEYYQKDLNITLDTLGEKHPSTATTYGNLGGVYNSKGEYDRAIHYYQKSLQIRLDTL 790

Query: 398 GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           GE+ P      NN+G +++ K ++  A Q  + A+
Sbjct: 791 GEKHPDTATTYNNLGGVYYSKCDYARAKQLMQRAV 825



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 140/359 (38%), Gaps = 58/359 (16%)

Query: 126 VEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRL-GIGLCRYKLGQLGKARQAFQ 176
           V ++ G Y  +LE+Y++  ++        HPS   AI    +G      G   +A   ++
Sbjct: 345 VYYSMGEYDRALEYYQKGFKITLDTLGEKHPST--AITYSSLGQVYCNKGDYDRAIHYYE 402

Query: 177 RALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC-------------- 222
           + LQ+  + +E            N    +        RA   Y  C              
Sbjct: 403 KCLQIQLDTLEEKHPHTATTY--NNLGHVYCSKCDYDRAIHYYDKCLQIQLDTLGEKHAE 460

Query: 223 -AMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDY 276
            A   N L       G++    +  + +L +         P+ +  + NL + Y+SKGDY
Sbjct: 461 TARTYNNLGGVHCSMGEYDRALEYCQQSLQIYLDTWGEKHPSTATIHNNLGQVYYSKGDY 520

Query: 277 EKAGLYYMASVK----EINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI----- 326
           ++A  YY   ++     + + H      Y  LGQV    GD+  AL  FEK L+I     
Sbjct: 521 DRAIHYYEKCLQIQLDTLGEKHPHTAGTYNNLGQVYESKGDYDRALAYFEKCLQIQLDTL 580

Query: 327 ---YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELL 375
              +P    T   LG +Y   G  ++A     K  +I         P  A  + +LG++ 
Sbjct: 581 GEKHPSTATTCGNLGQVYRSKGDYDRAIHYYEKCLQIQLDTLGEKHPHTATTYGNLGQVY 640

Query: 376 IS-SDTGAALDAF-KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            S  D   A   + K+ +  L   GE+ P      NN+G ++  KGE++ A   ++ +L
Sbjct: 641 KSKGDYDLATHYYQKSLQIKLDTLGEKHPDTATTYNNLGQVYNSKGEYDRAIHYYEKSL 699



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 30/224 (13%)

Query: 237 GQHFLVEQLTETAL-----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK--- 288
           G+H   EQ  +  L      +    P+ + +Y NL   Y+S G+Y++A  YY    K   
Sbjct: 308 GEHERAEQFLQRGLDIELNTLGEKHPSTATTYGNLGGVYYSMGEYDRALEYYQKGFKITL 367

Query: 289 -EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALG 338
             + + H      Y  LGQV    GD+  A+  +EK L+I        +P    T   LG
Sbjct: 368 DTLGEKHPSTAITYSSLGQVYCNKGDYDRAIHYYEKCLQIQLDTLEEKHPHTATTYNNLG 427

Query: 339 HIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLIS-SDTGAALD-AFK 388
           H+Y      ++A     K  +I            A+ + +LG +  S  +   AL+   +
Sbjct: 428 HVYCSKCDYDRAIHYYDKCLQIQLDTLGEKHAETARTYNNLGGVHCSMGEYDRALEYCQQ 487

Query: 389 TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           + +  L   GE+ P    + NN+G +++ KG+++ A   ++  L
Sbjct: 488 SLQIYLDTWGEKHPSTATIHNNLGQVYYSKGDYDRAIHYYEKCL 531



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 74/336 (22%)

Query: 68  ATQYYNKASRIDM--------HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV-- 117
           A  YY K  +I +        H   T+   GQ+  +KG+ ++A + F+  L+   D +  
Sbjct: 523 AIHYYEKCLQIQLDTLGEKHPHTAGTYNNLGQVYESKGDYDRALAYFEKCLQIQLDTLGE 582

Query: 118 --PAL------LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
             P+       LGQ  V  ++G Y  ++ +Y++ LQ+     G            LGQ+ 
Sbjct: 583 KHPSTATTCGNLGQ--VYRSKGDYDRAIHYYEKCLQIQLDTLGEKHPHTATTYGNLGQVY 640

Query: 170 KAR-------QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
           K++         +Q++LQ+                             K+    E +P  
Sbjct: 641 KSKGDYDLATHYYQKSLQI-----------------------------KLDTLGEKHPDT 671

Query: 223 AMALNYLANHFFFTGQ-----HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           A   N L   +   G+     H+  + L      +    P  + +Y NL + Y SKG+Y+
Sbjct: 672 ATTYNNLGQVYNSKGEYDRAIHYYEKSLQIKLDTLGEKHPDTATTYNNLGQVYRSKGEYD 731

Query: 278 KAGLYYM----ASVKEINKPHEFIFPYYG-LGQVQLKLGDFRSALTNFEKVLEI------ 326
           +A  YY      ++  + + H      YG LG V    G++  A+  ++K L+I      
Sbjct: 732 RALEYYQKDLNITLDTLGEKHPSTATTYGNLGGVYNSKGEYDRAIHYYQKSLQIRLDTLG 791

Query: 327 --YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
             +PD   T   LG +Y       +A++L+++A  I
Sbjct: 792 EKHPDTATTYNNLGGVYYSKCDYARAKQLMQRAVDI 827


>gi|254442510|ref|ZP_05055986.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198256818|gb|EDY81126.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 592

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 135/339 (39%), Gaps = 49/339 (14%)

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           L  QY ++A +I  +  +  V KG+ LL+  + + A  AF+        +  A +G A  
Sbjct: 279 LCKQYLSRAEQIAPNNANVLVEKGRTLLSSQKPKDALRAFEKATAQPNPHEAAYIGLAQA 338

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
             + G+   ++E    A   +P     +   +G       +L  A  AF+RA  L+P N 
Sbjct: 339 TASTGKPKQAIELLVAAETQYPKS-AELLSALGTLYLSQQKLDSALDAFKRAHSLNPRNP 397

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH------FFFTGQHF 240
           +A   L  + L    A G + G+             A   NYL           FT ++ 
Sbjct: 398 QANRNLGTLLL----ARGDKSGL-------------AYTENYLVRQPDDSEVALFTARNL 440

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           L +Q    A A              L RSY S           +AS             Y
Sbjct: 441 LEKQGNPQAAAAL------------LQRSYDSLARPSNELRQLLASS------------Y 476

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           + L  +Q        A+ + E+ L I+PDN E L  LG I  QLG  EKA+  L +  + 
Sbjct: 477 HQLSNLQASQKRLAPAIASLEQSLTIWPDNYEALANLGMINAQLGNHEKAESYLLQFTEA 536

Query: 361 DPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAG 398
            P+D   +++LG++ LI+     A+ A+K   +  +  G
Sbjct: 537 QPQDPNGWLNLGKVYLIAKRLPDAISAWKNGLSQARSQG 575


>gi|72382932|ref|YP_292287.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002782|gb|AAZ58584.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 685

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 30/343 (8%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G +L + G++++A  + +  +E   D   A L    +  + G+  ++   Y++A++++P 
Sbjct: 86  GIILKSLGKLQEAELSTRKAIEIKPDYAKAHLNLGIILSDLGKLEEAELSYRKAIELNPD 145

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
              A    +G+    LG+L +A  ++ +A++L+P   EA   L            I K +
Sbjct: 146 FAEA-HYNLGIILSDLGKLEEAELSYCKAIELNPNFAEAHSNLG----------NILKDL 194

Query: 210 EKMQRA-------FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA---VTNHGPTK 259
            K+Q A        E+ P  A A      H+        + +L E  L+        P  
Sbjct: 195 GKLQEAELSYRKTIELNPDFADA------HYNLGVLLKELGKLEEAELSYRKAIELNPDF 248

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           ++++YNL       G  E+A L    ++K   KP ++   +Y LG +  +LG  + A  +
Sbjct: 249 ANAHYNLGIILKDLGKLEEAELSCRKAIKI--KP-DYADSHYNLGVLLKELGKLQEAELS 305

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
           + K +E+ PD       LG I   LG++E+A+   RKA KI P  A A+  +  +  S +
Sbjct: 306 YRKAIELNPDFANAHYNLGIILKDLGKLEEAELSCRKAIKIKPDYAIAYYSISLIKYSDE 365

Query: 380 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
                D   +   L+ K+ E+          ++H EK   ES+
Sbjct: 366 NNIWQDQLFSKNILINKSQEDQVYIYFARANILHKEKQYEESS 408



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 22/310 (7%)

Query: 250 LAVTNHGPTKS--HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
           + +T + P+K       N A  +HS+G+  +A   Y   + ++ K H  +F  YG+  + 
Sbjct: 33  ITITTNTPSKPSKEQIINQALKFHSQGNISEAAKLYQYFIDKVFKDHR-VFSNYGI--IL 89

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             LG  + A  +  K +EI PD  +    LG I   LG++E+A+   RKA +++P  A+A
Sbjct: 90  KSLGKLQEAELSTRKAIEIKPDYAKAHLNLGIILSDLGKLEEAELSYRKAIELNPDFAEA 149

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQS 425
             +LG  +I SD G      + A     KA E  P   E  +N+G I  + G+ + A  S
Sbjct: 150 HYNLG--IILSDLGK----LEEAELSYCKAIELNPNFAEAHSNLGNILKDLGKLQEAELS 203

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
           ++  +   +     D+     V+      L+  + +L +R       +EL  +     +N
Sbjct: 204 YRKTIE--LNPDFADAHYNLGVLLKELGKLE--EAELSYR-----KAIELNPDFANAHYN 254

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
           L  +L+ +     A +  R  +    DY D++  L  + K    LQ +     +A+++N 
Sbjct: 255 LGIILKDLGKLEEAELSCRKAIKIKPDYADSHYNLGVLLKELGKLQEAELSYRKAIELNP 314

Query: 546 KYPNALSMLG 555
            + NA   LG
Sbjct: 315 DFANAHYNLG 324


>gi|338814927|ref|ZP_08626892.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
 gi|337273094|gb|EGO61766.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
          Length = 525

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 135/336 (40%), Gaps = 21/336 (6%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN+A  +D      +  +G +    G+ E A + +   LE D D V A   +  +   + 
Sbjct: 192 YNRAIELDPRSVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQK 251

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           RY +++  + +AL+++PS   A     G C Y  G   +A   + +AL +D   + A   
Sbjct: 252 RYGEAIADFNKALELNPSSAAAYDRR-GRCYYAQGNYDQAIADYSKALDIDSRYIHAYNN 310

Query: 192 LAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
                  A    G+R + +     A EI P  A+A       ++  G H   +Q      
Sbjct: 311 RG----NAYSNRGLRDQAIADYSLAIEINPRNAIAYRNRGLVYWTKGMH---DQAIADFS 363

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP----HEFIFPYYGLGQV 306
                 P    +Y N    Y  KG Y+        S+++ NK      +++F Y   GQ 
Sbjct: 364 QALELRPGFKLAYINRGDVYRDKGRYD-------LSLEDFNKVLTLNSDYVFAYQSRGQT 416

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
              +G++  A+ ++ K L + P   E  K     Y +LG+  +A      A K++P    
Sbjct: 417 YFAMGEYDRAIIDYNKALALKPQVAEVHKNRADAYRKLGKATEAVADYDAALKLNP-GLD 475

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 402
            +I   +  +    G   DA +  +  ++ A  E P
Sbjct: 476 PYIYFYKAALYQQAGFTADAVQNYKLFVEHAPPENP 511



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 139/362 (38%), Gaps = 54/362 (14%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G      G+ EQA S F   +  D  +  A L +  + + RG+Y +++  + R++Q+  
Sbjct: 39  RGNFYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYVEAIADFTRSIQLDA 98

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--- 205
           + P A         Y  G   +AR+ + +AL     +   ++AL     +A   +G+   
Sbjct: 99  ANPKAF--------YSRGLAFRARKMYDQAL----TDFNKVIALNRKYWEAYYQSGLVQA 146

Query: 206 -----RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG---- 256
                 + +    +  E+ P    +L       F  G  F   +  + AL   N      
Sbjct: 147 SKENYEQAVRDYTKTLELNPRHVPSL-------FERGNVFFALEQWDQALRDYNRAIELD 199

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG-LGQVQLKLGDFRS 315
           P     Y +    Y   G  E A   Y  ++ EI+  +   +   G L Q+Q + G+   
Sbjct: 200 PRSVQVYNSRGLVYAETGKPEAALADYNKAL-EIDPDYVHAYNNRGDLYQLQKRYGE--- 255

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           A+ +F K LE+ P +       G  Y   G  ++A     KA  ID R   A+ + G   
Sbjct: 256 AIADFNKALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAY 315

Query: 376 ISSDTGAALDAFKTARTLLKKAGEEVPIEV-------LNNIGVIHFEKGEFESAHQSFKD 428
             S+ G    A          A   + IE+         N G++++ KG  + A   F  
Sbjct: 316 --SNRGLRDQAI---------ADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQ 364

Query: 429 AL 430
           AL
Sbjct: 365 AL 366


>gi|389581569|ref|ZP_10171596.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
 gi|389403204|gb|EIM65426.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
          Length = 334

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 145/338 (42%), Gaps = 54/338 (15%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +G    A   ++  L  DR++V AL     +    G + +++   +RA+ V P    A  
Sbjct: 24  QGNRRAAEHEYRRALHVDRNHVSALNNLGFLLIETGAFEEAVLLLQRAIGVVPENEDAYN 83

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM-DLQANEAAGIRKGMEKMQR 214
             +GL  ++L Q  +A++AF+ A++ +P +  A   L V+   + N  A +         
Sbjct: 84  -NLGLAYFQLEQHERAQRAFETAIRYNPSHHSASFNLGVLYQSRGNWGAAV--------- 133

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             + Y       N+L NH                        P    + YNLA +Y++ G
Sbjct: 134 --DTYK------NHLRNH------------------------PRHPEALYNLAVAYNALG 161

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
             ++A  YY  ++K+     + +     LGQ+ L+      AL   E+ LEI P++   L
Sbjct: 162 MLDQAETYYHLAIKQSGANADALV---NLGQLYLRKRQADRALAVLERALEIEPEHPLGL 218

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  ++V   + ++A+ LL K     P    A  +L  +       A L     A TLL
Sbjct: 219 YNLALVWVTKKKPDRAKPLLAKVVAKRPDYIPAISNLAMIC------AELADPDEAHTLL 272

Query: 395 KKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           ++A +  P    +L N+GV+  ++G  ++A ++F   L
Sbjct: 273 RRALDLAPSTPTLLFNLGVVEAKQGNRDAAIEAFSKVL 310



 Score = 46.2 bits (108), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 110/276 (39%), Gaps = 17/276 (6%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG + ++ G F  A+   ++ + + P+N +    LG  Y QL Q E+AQ     A + +P
Sbjct: 51  LGFLLIETGAFEEAVLLLQRAIGVVPENEDAYNNLGLAYFQLEQHERAQRAFETAIRYNP 110

Query: 363 RDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
               A  +LG L  S  + GAA+D +K     L+        E L N+ V +   G  + 
Sbjct: 111 SHHSASFNLGVLYQSRGNWGAAVDTYKNH---LRNHPRHP--EALYNLAVAYNALGMLDQ 165

Query: 422 AHQSFKDALG-DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 480
           A   +  A+   G     L +  + Y+    A     + + +  R       +E+     
Sbjct: 166 AETYYHLAIKQSGANADALVNLGQLYLRKRQAD----RALAVLERA------LEIEPEHP 215

Query: 481 TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 540
             L+NLA +         A  L   ++ K  DY+ A   LA I     +   +  L+  A
Sbjct: 216 LGLYNLALVWVTKKKPDRAKPLLAKVVAKRPDYIPAISNLAMICAELADPDEAHTLLRRA 275

Query: 541 LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD 576
           L +    P  L  LG +E K  +   A E F    D
Sbjct: 276 LDLAPSTPTLLFNLGVVEAKQGNRDAAIEAFSKVLD 311



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 38/244 (15%)

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
           E+A  AF+  +  +  +  A      +  +RG +  +++ YK  L+ HP  P A+   + 
Sbjct: 96  ERAQRAFETAIRYNPSHHSASFNLGVLYQSRGNWGAAVDTYKNHLRNHPRHPEAL-YNLA 154

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
           +    LG L +A   +  A++    N +ALV L  + L+  +A    + +  ++RA EI 
Sbjct: 155 VAYNALGMLDQAETYYHLAIKQSGANADALVNLGQLYLRKRQA---DRALAVLERALEIE 211

Query: 220 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           P   + L  LA                   + VT   P ++     LA+    + DY  A
Sbjct: 212 PEHPLGLYNLA------------------LVWVTKKKPDRAKPL--LAKVVAKRPDYIPA 251

Query: 280 GLYYMASVKEINKPHEF---------IFP-----YYGLGQVQLKLGDFRSALTNFEKVLE 325
                    E+  P E          + P      + LG V+ K G+  +A+  F KVL+
Sbjct: 252 ISNLAMICAELADPDEAHTLLRRALDLAPSTPTLLFNLGVVEAKQGNRDAAIEAFSKVLD 311

Query: 326 IYPD 329
           + P+
Sbjct: 312 LEPE 315


>gi|425462037|ref|ZP_18841511.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9808]
 gi|389825023|emb|CCI25577.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9808]
          Length = 569

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 139/302 (46%), Gaps = 31/302 (10%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   
Sbjct: 41  YLWQGDRLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDRGFI 100

Query: 146 VHPSCPG-------AIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDL 197
           V+   P         + LG    R +  +  +A  A+Q+A+ + P    +  +  A+  L
Sbjct: 101 VNHKPPMEPSQSNYLVALGDIFAREE--KWSEAIDAYQKAMIIKPTFKAQFQLGKALYSL 158

Query: 198 Q-ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           Q  +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A       
Sbjct: 159 QRWDEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQA 205

Query: 257 ----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
               P +  +Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G 
Sbjct: 206 LELIPNQGETYKKLGETLAKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGK 262

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
              A+  F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++A   L 
Sbjct: 263 LGEAMAVFQQARQISPKNAKIYQNLCYIYINNGQIDEGLNWCRQAVEIDPNLSEARFILQ 322

Query: 373 EL 374
           E+
Sbjct: 323 EI 324


>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1337

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 153/390 (39%), Gaps = 67/390 (17%)

Query: 45  GVYYTYLGKIETKQREKEEHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQA 102
           GV  +YLG+ E            A   Y++A +   D+HE   W  +G  L   GE E+A
Sbjct: 320 GVALSYLGEYEK-----------AISSYDQAIKFKPDLHE--AWNNRGNALANLGEYEKA 366

Query: 103 SSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 162
            S++   ++   D   A   +     N G Y  ++  Y +A++  P    A     GL  
Sbjct: 367 ISSYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAW-FNRGLAL 425

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
           Y LG+  KA  ++ +A++  P+  EA     V                            
Sbjct: 426 YDLGEYEKAISSYDQAIKFKPDYHEAWFVRGV---------------------------- 457

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
             AL+YL  H          E+   +        P    ++ N   +    G+YEKA   
Sbjct: 458 --ALSYLGEH----------EKAISSYDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISS 505

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
           Y  ++K     HE    ++  G     LG++  A++++++ ++  PD  E     G    
Sbjct: 506 YDQAIKFKPDDHE---AWFNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALS 562

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 402
            LG+ EKA     +A K  P D QA+ + G  L      + L  ++ A +   +A +  P
Sbjct: 563 DLGEYEKAISSYDQAIKFKPDDHQAWSNRGVAL------SYLGEYEKAISSYDQAIKFKP 616

Query: 403 --IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              E  +N G+     GE+E A  S+  A+
Sbjct: 617 DFHEAWSNRGLALSYLGEYEKAISSYDQAI 646


>gi|332298025|ref|YP_004439947.1| hypothetical protein Trebr_1392 [Treponema brennaborense DSM 12168]
 gi|332181128|gb|AEE16816.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
           brennaborense DSM 12168]
          Length = 391

 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 138/346 (39%), Gaps = 49/346 (14%)

Query: 82  EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 141
           E S    KG   L +  +++A  AF  +LE + +N  AL+G    E  +  + +++E+Y 
Sbjct: 35  EISELSKKGYHFLKENRIKEADDAFNKILELEDNNNYALVGLGDSERKQNHFREAIEYYS 94

Query: 142 RALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 201
           R L  HP    A+  G+  C   L Q  KA   +++ L  D  N+  L  +         
Sbjct: 95  RCLTYHPGNNYAL-FGLADCYKALNQYHKAIDIWEQYLMHDDRNITVLTRV--------- 144

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
           A   RK +   +++ ++Y                              L V +     ++
Sbjct: 145 ADAYRK-IRDFKKSKQLY------------------------------LKVLDMEENNAY 173

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           +   L   ++   +Y  A LYY   + E+N+ +  I     +G    KL  F   +  FE
Sbjct: 174 ALIGLGHLHYDFKEYRDA-LYYWTRMFELNERNVDIRVLTSIGNCHRKLKTFDKGVYYFE 232

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
           + LE  PDN   L  L   Y  + Q  ++ E   K  + DPR+       G+     +TG
Sbjct: 233 RALETEPDNFYALFGLADCYRGMNQQFRSVEYWNKILEKDPRNKVILTRAGDAY--RNTG 290

Query: 382 AALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSF 426
                ++TA     KA + E  +  +  + +I   +G++E A  S 
Sbjct: 291 ----DYETASAYYNKALDIEFDLYAVLGLALISKGQGKYEEAIASL 332


>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 747

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 155/348 (44%), Gaps = 38/348 (10%)

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
           A+  V +A   +  V+  D  N  A  G+   +   G++ ++L+ + RALQ+ P    ++
Sbjct: 353 AQRRVPEALKLYDQVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSL 412

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGME 210
             G G+   +L Q   A Q+F RA+ L+P N  A      AL+ + L         + + 
Sbjct: 413 N-GKGVALNRLRQNRDALQSFDRAILLEPGNAVAWNGKGAALSALGLP-------EQALN 464

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT--ETALAVTNHGPTKSHSY-YNLA 267
               A    P  A+A         ++ +  ++ Q+   E AL  +     ++ SY  N A
Sbjct: 465 AFDTALSFDPRMALA---------WSNKSLILRQMRKYEEALQASE----QALSYEPNSA 511

Query: 268 RSYHSKG----DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            +++SKG    +  +    Y A  + + +   F    YG+G V      F+SAL N+++ 
Sbjct: 512 LNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRA 571

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GA 382
           L+  P+  +  +  G +  +LG   ++ E   +A +IDP  A A++    +L   +    
Sbjct: 572 LQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKATVLSRMERYDM 631

Query: 383 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           AL+A++ A     +    +P   LN  G   +  G + +A  ++ +AL
Sbjct: 632 ALNAYEEA----LRRNPSLP-AALNGKGNALYRLGNYSAALSAYDNAL 674



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 1/128 (0%)

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           ++ F  A   Y++A + D +    W  +GQLL   G   ++  +F+   + D    PA L
Sbjct: 558 QQKFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWL 617

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G+A V     RY  +L  Y+ AL+ +PS P A+  G G   Y+LG    A  A+  AL++
Sbjct: 618 GKATVLSRMERYDMALNAYEEALRRNPSLPAALN-GKGNALYRLGNYSAALSAYDNALKV 676

Query: 182 DPENVEAL 189
           +P  V AL
Sbjct: 677 NPRMVSAL 684



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 21/182 (11%)

Query: 81  HEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +EP++   W  KG +LL  G + +A  A++  L+ D    PAL G   V + + ++  +L
Sbjct: 506 YEPNSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSAL 565

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
           + Y RALQ  P+    +    G    +LG   ++ ++F+RA Q+DP    A +  A    
Sbjct: 566 DNYDRALQFDPNY-VKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKAT--- 621

Query: 198 QANEAAGIRKGMEKMQRAFEIY-------PYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
                  +   ME+   A   Y       P    ALN   N  +  G +       + AL
Sbjct: 622 -------VLSRMERYDMALNAYEEALRRNPSLPAALNGKGNALYRLGNYSAALSAYDNAL 674

Query: 251 AV 252
            V
Sbjct: 675 KV 676


>gi|196017432|ref|XP_002118524.1| hypothetical protein TRIADDRAFT_62555 [Trichoplax adhaerens]
 gi|190578804|gb|EDV18990.1| hypothetical protein TRIADDRAFT_62555 [Trichoplax adhaerens]
          Length = 1292

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 149/749 (19%), Positives = 298/749 (39%), Gaps = 140/749 (18%)

Query: 43  ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEPS---TWVGKGQLLL 94
           ++   Y  +G +   Q + ++    A   +NK+ +I++     + PS   T+   G +  
Sbjct: 184 SIATTYHNIGSVYNHQGKYDD----ALSMFNKSLKIELTQLADNHPSIATTYHNIGGVHK 239

Query: 95  AKGEVEQASSAF----KIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV 146
            +G+   A S F    KI L    DN P++         +  ++G+Y D+L  Y ++L++
Sbjct: 240 DQGKYNDALSMFNKSLKIQLTQLGDNHPSMAATYHNIGSIYNHQGKYDDALSTYYKSLKI 299

Query: 147 --------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL-----QLDPENVEALVALA 193
                   HPS        IG      G+   A   + ++L     QL   +    V+ +
Sbjct: 300 KLTQLGDNHPSIATTYH-NIGSVYKDQGKYDDALSMYNKSLKIILTQLGDNHPSIAVSYS 358

Query: 194 VMDLQANEAAGIRKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQL 245
            + L  N+       +    ++ +I        +P  A   + + + +   G++     +
Sbjct: 359 NIGLVYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAATYHNIGSVYNHQGKYGDALSM 418

Query: 246 TETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEF 296
              +L +      N+ P+ + +Y+N+      +G Y+ A   Y  S+K    ++   H  
Sbjct: 419 YNKSLKIQLTQLGNNHPSIAVTYHNIGSVCSHQGKYDDALSMYNKSLKILQTQLGDNHPS 478

Query: 297 IFPYYG-LGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQI 347
           I   YG +GQV    G +  AL+ + K L+I        +P    T   +G +Y   G+ 
Sbjct: 479 IAVSYGNIGQVYNDQGKYDDALSTYNKSLKILQTQLGDNHPSIATTYHNIGSVYKDQGKY 538

Query: 348 EKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLK 395
           + A  +  K+ KI+        P  A  + ++G   +  D G   DA     K+ +  L 
Sbjct: 539 DHALSMYNKSLKINQTQLGDNHPSIATTYHNIGS--VYKDQGKYDDALSMQNKSLKIQLT 596

Query: 396 KAGEEVP-IEVL-NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
           + G+  P I V+ +NIG ++ ++G++++A   +  +L   I L+ L         D   S
Sbjct: 597 QLGDNHPSIAVIYHNIGSVYEDQGKYDNALSMYNKSL--QIQLSQLG--------DNHPS 646

Query: 454 MLQFKDMQLFHRF----ENDGNHVELPWNKVTVLFNLARLLEQI-----HDTVAASVLYR 504
           +        +H F    E+ G      ++    +FN +  ++Q      H ++AA     
Sbjct: 647 I-----ATTYHNFGSVYEDQG-----KYDDALSMFNKSLKIKQTQLGNNHPSIAAK---- 692

Query: 505 LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN------------GKYPNALS 552
                       Y  ++ +   + N   ++ + N++LK+N              Y N  S
Sbjct: 693 ------------YHNISGVNNHQGNYDDALSMYNKSLKINQTQLGDNHPSIATTYHNIGS 740

Query: 553 MLGDLELKNDDWVKA-KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 611
           +  D + KNDD V   K++ +   D T   D++ +++    N      ++ +     A +
Sbjct: 741 VTKDQD-KNDDAVSMYKKSLKI--DLTQLGDNHPSIAATYHNIAGVYNDQGKHDNALAMY 797

Query: 612 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT---QVQEAASGSVFVQM 668
            +  K   T++   H S     +  G V + +G++D +  +     ++Q    G     +
Sbjct: 798 NKSLKIKLTKLGDNHLSIATTYHSIGSVYSHQGKYDDALSMHNKSLKIQLTQLGDNHPSI 857

Query: 669 PDVWINLAHVYFAQGNFALAMKMYQNCLR 697
              +  +  VY   G +  A+ MY   L+
Sbjct: 858 AVTYSYIGQVYNDHGKYDDALSMYNKSLK 886



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 149/379 (39%), Gaps = 84/379 (22%)

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGK 170
           + L  A +  N+G+Y+D+L  Y ++L++        HPS        IG      G+   
Sbjct: 146 SYLNIASIYDNQGKYNDALSMYNKSLRIQLTQLGDNHPSIATTYH-NIGSVYNHQGKYDD 204

Query: 171 ARQAFQRALQLDPENVEALVALA----VMDLQANEAAGIRKGMEKMQRAFEIY------- 219
           A   F ++L+++      L  LA     +    +   G+ K   K   A  ++       
Sbjct: 205 ALSMFNKSLKIE------LTQLADNHPSIATTYHNIGGVHKDQGKYNDALSMFNKSLKIQ 258

Query: 220 ------PYCAMALNY-----LANH---------FFFTGQHFLVEQLTETALAVTNHGPTK 259
                  + +MA  Y     + NH          ++      + QL +      NH P+ 
Sbjct: 259 LTQLGDNHPSMAATYHNIGSIYNHQGKYDDALSTYYKSLKIKLTQLGD------NH-PSI 311

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEI------NKPHEFIFPYYGLGQVQLKLGDF 313
           + +Y+N+   Y  +G Y+ A   Y  S+K I      N P      Y  +G V    G +
Sbjct: 312 ATTYHNIGSVYKDQGKYDDALSMYNKSLKIILTQLGDNHP-SIAVSYSNIGLVYNDQGKY 370

Query: 314 RSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID---- 361
             AL+ + K L+I        +P    T   +G +Y   G+   A  +  K+ KI     
Sbjct: 371 DDALSMYNKSLKIKLTQLGDNHPSIAATYHNIGSVYNHQGKYGDALSMYNKSLKIQLTQL 430

Query: 362 ----PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP-IEV-LNNIGV 411
               P  A  + ++G   + S  G   DA     K+ + L  + G+  P I V   NIG 
Sbjct: 431 GNNHPSIAVTYHNIGS--VCSHQGKYDDALSMYNKSLKILQTQLGDNHPSIAVSYGNIGQ 488

Query: 412 IHFEKGEFESAHQSFKDAL 430
           ++ ++G+++ A  ++  +L
Sbjct: 489 VYNDQGKYDDALSTYNKSL 507



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 91/418 (21%), Positives = 170/418 (40%), Gaps = 78/418 (18%)

Query: 72   YNKASRIDMHE--------PSTWVGKGQLLLAKGEVEQASS----AFKIVLEADRDNVPA 119
            YNK+ +I + +         +T+   G +   +G+ + A S    + KI L    DN P+
Sbjct: 797  YNKSLKIKLTKLGDNHLSIATTYHSIGSVYSHQGKYDDALSMHNKSLKIQLTQLGDNHPS 856

Query: 120  L------LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
            +      +GQ  V  + G+Y D+L  Y ++L++  +  G     I +  + +G +   + 
Sbjct: 857  IAVTYSYIGQ--VYNDHGKYDDALSMYNKSLKIQLTQLGDNHPSIAMTYHNIGSVYNYQG 914

Query: 174  AFQRALQLDPENVEA-LVALA----VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
             +  AL +  ++++  L  L      +    +    + K   K   A  +Y Y ++ +  
Sbjct: 915  KYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGSVYKDRSKYDDALSMY-YKSLKIK- 972

Query: 229  LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
                           QL +      NH P+ + +Y N+ + YH +G Y+ A   Y  S+K
Sbjct: 973  -------------RSQLGD------NH-PSIAITYSNIGQVYHHQGKYDDALSMYNKSLK 1012

Query: 289  ----EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLK 335
                ++   H  I   Y+ +G      G +  AL+ F K L+I        +P    T  
Sbjct: 1013 IQLTQLGDNHPSIAATYHNIGDTYYHQGKYDDALSMFNKSLKINQTQLGDNHPSIASTYH 1072

Query: 336  ALGHIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF 387
             +G +Y   G+ + A  +  K+ KI         P  A  + +L  +      G   DA 
Sbjct: 1073 NIGSVYEDQGKYDAALSMYYKSLKIKLTQLGDNHPNIATTYHNLAGVYYHQ--GKYDDAL 1130

Query: 388  ----KTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 439
                K+ +  L + G+  P      +NIG ++  +G+++     +K +L   I LT L
Sbjct: 1131 LMYNKSLKINLTQLGDNHPTIATTYHNIGGVYNHQGKYDDTVSMYKKSL--KILLTQL 1186



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 96/477 (20%), Positives = 195/477 (40%), Gaps = 67/477 (14%)

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFR 314
           S SY N+A  Y ++G Y  A   Y  S++    ++   H  I   Y+ +G V    G + 
Sbjct: 144 SESYLNIASIYDNQGKYNDALSMYNKSLRIQLTQLGDNHPSIATTYHNIGSVYNHQGKYD 203

Query: 315 SALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID----- 361
            AL+ F K L+I        +P    T   +G ++   G+   A  +  K+ KI      
Sbjct: 204 DALSMFNKSLKIELTQLADNHPSIATTYHNIGGVHKDQGKYNDALSMFNKSLKIQLTQLG 263

Query: 362 ---PRDAQAFIDLGELLISSDTGAALDA----FKTARTLLKKAGEEVP--IEVLNNIGVI 412
              P  A  + ++G   I +  G   DA    +K+ +  L + G+  P      +NIG +
Sbjct: 264 DNHPSMAATYHNIGS--IYNHQGKYDDALSTYYKSLKIKLTQLGDNHPSIATTYHNIGSV 321

Query: 413 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 472
           + ++G+++ A   +  +L   I LT L     +  +  S   L + D     ++++    
Sbjct: 322 YKDQGKYDDALSMYNKSL--KIILTQLGDNHPSIAVSYSNIGLVYNDQG---KYDD---- 372

Query: 473 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF----KYQDYVDAY-----LRLAAI 523
             L     ++   L +L +  H ++AA+      ++    KY D +  Y     ++L  +
Sbjct: 373 -ALSMYNKSLKIKLTQLGDN-HPSIAATYHNIGSVYNHQGKYGDALSMYNKSLKIQLTQL 430

Query: 524 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDS 583
                ++ ++   +       GKY +ALSM          + K+ +  +     T   D+
Sbjct: 431 GNNHPSIAVTYHNIGSVCSHQGKYDDALSM----------YNKSLKILQ-----TQLGDN 475

Query: 584 YATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 643
           + ++++   N      ++ +     +T+ +  K L T++   H S     +  G V  ++
Sbjct: 476 HPSIAVSYGNIGQVYNDQGKYDDALSTYNKSLKILQTQLGDNHPSIATTYHNIGSVYKDQ 535

Query: 644 GQFDVSKDLFT---QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
           G++D +  ++    ++ +   G     +   + N+  VY  QG +  A+ M    L+
Sbjct: 536 GKYDHALSMYNKSLKINQTQLGDNHPSIATTYHNIGSVYKDQGKYDDALSMQNKSLK 592



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 93/462 (20%), Positives = 188/462 (40%), Gaps = 86/462 (18%)

Query: 43   ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEPS---TWVGKGQLLL 94
            ++ V Y  +G +   Q + +     A   YNK+ +I +     + PS   T+   G +  
Sbjct: 604  SIAVIYHNIGSVYEDQGKYDN----ALSMYNKSLQIQLSQLGDNHPSIATTYHNFGSVYE 659

Query: 95   AKGEVEQASSAFKIVLEADR----DNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV 146
             +G+ + A S F   L+  +    +N P++  +    + V  ++G Y D+L  Y ++L++
Sbjct: 660  DQGKYDDALSMFNKSLKIKQTQLGNNHPSIAAKYHNISGVNNHQGNYDDALSMYNKSLKI 719

Query: 147  HPSCPGAIRLGIGLCRYKLGQLGK-------ARQAFQRALQLD----PENVEALVALAVM 195
            + +  G     I    + +G + K       A   ++++L++D     +N  ++ A    
Sbjct: 720  NQTQLGDNHPSIATTYHNIGSVTKDQDKNDDAVSMYKKSLKIDLTQLGDNHPSIAA---- 775

Query: 196  DLQANEAAGIRKGMEKMQRAFEIY------PYCAMALNYL--ANHFFFTGQHFLVEQLTE 247
                +  AG+     K   A  +Y          +  N+L  A  +   G  +  +   +
Sbjct: 776  --TYHNIAGVYNDQGKHDNALAMYNKSLKIKLTKLGDNHLSIATTYHSIGSVYSHQGKYD 833

Query: 248  TALAVTN------------HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EIN 291
             AL++ N            + P+ + +Y  + + Y+  G Y+ A   Y  S+K    ++ 
Sbjct: 834  DALSMHNKSLKIQLTQLGDNHPSIAVTYSYIGQVYNDHGKYDDALSMYNKSLKIQLTQLG 893

Query: 292  KPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYV 342
              H  I   Y+ +G V    G +  AL+ + K L+I        +P    T   +G +Y 
Sbjct: 894  DNHPSIAMTYHNIGSVYNYQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGSVYK 953

Query: 343  QLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF----KTA 390
               + + A  +  K+ KI         P  A  + ++G+  +    G   DA     K+ 
Sbjct: 954  DRSKYDDALSMYYKSLKIKRSQLGDNHPSIAITYSNIGQ--VYHHQGKYDDALSMYNKSL 1011

Query: 391  RTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +  L + G+  P      +NIG  ++ +G+++ A   F  +L
Sbjct: 1012 KIQLTQLGDNHPSIAATYHNIGDTYYHQGKYDDALSMFNKSL 1053



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 65/318 (20%), Positives = 134/318 (42%), Gaps = 53/318 (16%)

Query: 74   KASRIDMHEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEADRDNVPALLGQ--- 123
            K S++  + PS   T+   GQ+   +G+ + A S +    KI L    DN P++      
Sbjct: 972  KRSQLGDNHPSIAITYSNIGQVYHHQGKYDDALSMYNKSLKIQLTQLGDNHPSIAATYHN 1031

Query: 124  -ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
                 +++G+Y D+L  + ++L+++ +  G     I    + +G + + +  +  AL + 
Sbjct: 1032 IGDTYYHQGKYDDALSMFNKSLKINQTQLGDNHPSIASTYHNIGSVYEDQGKYDAALSMY 1091

Query: 183  PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
             ++++                       K+ +  + +P  A   + LA  ++  G++   
Sbjct: 1092 YKSLKI----------------------KLTQLGDNHPNIATTYHNLAGVYYHQGKYDDA 1129

Query: 243  EQLTETALAVT------NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINK 292
              +   +L +       NH PT + +Y+N+   Y+ +G Y+     Y  S+K    ++  
Sbjct: 1130 LLMYNKSLKINLTQLGDNH-PTIATTYHNIGGVYNHQGKYDDTVSMYKKSLKILLTQLGD 1188

Query: 293  PHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEI----YPDN----CETLKALGHIYVQ 343
             H  I   Y+  G V    G +  AL+ + K L+I      DN      T   +G ++  
Sbjct: 1189 NHLSIAAIYHSFGSVYNNQGKYDDALSVYYKSLKIKLTKLGDNHLSIATTYHNIGGVHSH 1248

Query: 344  LGQIEKAQELLRKAAKID 361
             G+ + A  +  K+ KI+
Sbjct: 1249 QGKYDDALLMFNKSLKIE 1266


>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 1491

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 175/436 (40%), Gaps = 56/436 (12%)

Query: 6   FKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHF 65
           FK G+ E+     ++  S + D+Y+A  +         LGV    LG+ E      ++  
Sbjct: 323 FKLGRNEEALASFDQVISLQPDDYHAWFK---------LGVALGELGRNEEALASFDQVI 373

Query: 66  ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
            L   YY             W  +G  L   G  E+A + F  V+    D  PA   +  
Sbjct: 374 SLQPDYY-----------PAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGA 422

Query: 126 VEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
             F  GRY ++L  + + + + P   P     G  L  +KLG+  +A  +F + + L P+
Sbjct: 423 ALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAAL--FKLGRNEEALASFDQVISLQPD 480

Query: 185 NVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           +  A     +A+ +L  NE A     +    +   + P    A +      F  G++   
Sbjct: 481 DYHAWFKRGVALGELGRNEEA-----LASFDQVISLQPDYYPAWDNRGVVLFELGRN--- 532

Query: 243 EQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
               E ALA  +      P  S ++ N   +    G +E+A   +  ++    +P ++  
Sbjct: 533 ----EEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISL--QPDDY-H 585

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            ++  G    KLG    ALTNF++V+ + PD+       G    +LG+ E+A     +  
Sbjct: 586 AWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVI 645

Query: 359 KIDPRDAQAF----IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
            + P D+ A+    + LGEL    +   AL  F  A +L          +  +N G   F
Sbjct: 646 SLQPDDSSAWDNRGVVLGELGRHEE---ALANFDQAISLQPDY-----YQTWDNRGAALF 697

Query: 415 EKGEFESAHQSFKDAL 430
           + G +E A  +F   +
Sbjct: 698 KLGRYEEALANFDQVI 713



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 155/372 (41%), Gaps = 40/372 (10%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            +++   +   + S W  +G LL   G  E+A +++  V+    D+  A   +  +    G
Sbjct: 743  FDQVISLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELG 802

Query: 132  RYSDSLEFYKRALQVHPSC-PGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVE 187
            R+ ++L  Y + + + P   P     G+      LG+LG+ ++A   F + + L P++  
Sbjct: 803  RHKEALTSYDQVISLQPDYYPAWDNRGV-----VLGELGRHKEALANFDQVISLQPDDYH 857

Query: 188  AL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
            A     VAL  +       A   + +      +  +    +AL  L  H           
Sbjct: 858  AWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRH----------- 906

Query: 244  QLTETALAVTNHGPTKSHSYY----NLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIF 298
               E ALA  +   +    YY    N        G YE+A    +A+  + I+   +F  
Sbjct: 907  ---EEALANFDQAISLQPDYYPAWDNRGVMLIKLGRYEEA----LANFDQAISLQPDFYQ 959

Query: 299  PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
             + G G    +LG +  AL NF++ + + PD  +T    G + ++LG+ E+A   L +A 
Sbjct: 960  AWRGKGVALSELGRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAI 1019

Query: 359  KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
             + P   QA+ +   +L  S+ G   +A  +   ++    ++   +  +N G    E G 
Sbjct: 1020 SLQPDYYQAWFNRSAML--SNLGRYREALTSDDQVISLQPDDY--QAWHNRGAALGELGR 1075

Query: 419  FESAHQSFKDAL 430
            +E A  +F  A+
Sbjct: 1076 YEEALANFDQAI 1087



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 16/294 (5%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W  +G  L   G  E+A ++F  V+    D  PA   +  V F  GR  ++L  + +A+
Sbjct: 484 AWFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRNEEALANFDQAI 543

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEA 202
            + P    A     G   +KLG+  +A   F +A+ L P++  A     +A+  L  +E 
Sbjct: 544 SLQPDYSSAWN-NRGAALFKLGRHEEALTNFDQAISLQPDDYHAWFKRGVALFKLGRHEE 602

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
           A     +    +   + P    A        F  G+H   E+       V +  P  S +
Sbjct: 603 A-----LTNFDQVISLQPDDYHAWFKRGVALFKLGRH---EEALTNFDQVISLQPDDSSA 654

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           + N        G +E+A    +A+  + I+   ++   +   G    KLG +  AL NF+
Sbjct: 655 WDNRGVVLGELGRHEEA----LANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFD 710

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           +V+ + PD  +     G +  +LG+ ++A     +   + P D+ A+ + G LL
Sbjct: 711 QVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLL 764



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 148/389 (38%), Gaps = 68/389 (17%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W  +G  L   G  E+A + F   +    D       +  V    GR+ ++L  + RA+ 
Sbjct: 179 WFNQGVTLYELGRYEEALAKFDQAISLQPDYYHPWDNRGGVLIKLGRHKEALASFDRAIS 238

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEAL--VALAVMDLQAN 200
           + P    A R G G+    LG LG+ ++A     +A+ L P+  +       A+ +L   
Sbjct: 239 LQPDYYQAWR-GRGVV---LGMLGRHKEALANLDQAISLQPDFYKTWDNRGAALGELGRY 294

Query: 201 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHG 256
           E A     +    +A  + P  + A N      F  G++       E ALA    V +  
Sbjct: 295 EEA-----LANFDQAISLQPDDSSAWNNRGVVLFKLGRN-------EEALASFDQVISLQ 342

Query: 257 PTKSHSYYNLARS-----------------------YHSKGDYEKAGLYYMASVKE---- 289
           P   H+++ L  +                       Y+   D   A L+ +   +E    
Sbjct: 343 PDDYHAWFKLGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGAALFKLGRYEEALAN 402

Query: 290 ----INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
               I+   ++   +   G    KLG +  AL NF++V+ + PD        G    +LG
Sbjct: 403 FDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLG 462

Query: 346 QIEKAQELLRKAAKIDPRDAQAF----IDLGELLISSDTGAALDAFKTARTLLKKAGEEV 401
           + E+A     +   + P D  A+    + LGEL  + +  A+ D   + +     A    
Sbjct: 463 RNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPA---- 518

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                +N GV+ FE G  E A  +F  A+
Sbjct: 519 ----WDNRGVVLFELGRNEEALANFDQAI 543



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 126/315 (40%), Gaps = 30/315 (9%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFN 129
           +++A  +   + S W  +G +L   G  E+A ++F  V+    D+  A   LG A  E  
Sbjct: 301 FDQAISLQPDDSSAWNNRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGEL- 359

Query: 130 RGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
            GR  ++L  + + + + P   P     G  L  +KLG+  +A   F + + L P+   A
Sbjct: 360 -GRNEEALASFDQVISLQPDYYPAWDNRGAAL--FKLGRYEEALANFDQVISLQPDYYPA 416

Query: 189 L--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
                 A+  L   E A     +    +   + P    A +      F  G++       
Sbjct: 417 WDNRGAALFKLGRYEEA-----LANFDQVISLQPDYYPAWDNRGAALFKLGRN------- 464

Query: 247 ETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY- 301
           E ALA    V +  P   H+++    +    G  E+A    +AS  ++       +P + 
Sbjct: 465 EEALASFDQVISLQPDDYHAWFKRGVALGELGRNEEA----LASFDQVISLQPDYYPAWD 520

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             G V  +LG    AL NF++ + + PD        G    +LG+ E+A     +A  + 
Sbjct: 521 NRGVVLFELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQ 580

Query: 362 PRDAQAFIDLGELLI 376
           P D  A+   G  L 
Sbjct: 581 PDDYHAWFKRGVALF 595



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 86/413 (20%), Positives = 171/413 (41%), Gaps = 46/413 (11%)

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
             W  +G +L   G  ++A + F  V+    D+  A   +       GRY ++L  + +A+
Sbjct: 824  AWDNRGVVLGELGRHKEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEALANFDQAI 883

Query: 145  QVHPSC-PGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEALVALAVMDLQAN 200
             + P   P     G+ L     G+LG+  +A   F +A+ L P+   A     VM ++  
Sbjct: 884  SLQPDFYPAWDNRGVAL-----GELGRHEEALANFDQAISLQPDYYPAWDNRGVMLIKLG 938

Query: 201  EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT--ETALAVTNHGPT 258
                  + +    +A  + P    A         + G+   + +L   E ALA  +   +
Sbjct: 939  R---YEEALANFDQAISLQPDFYQA---------WRGKGVALSELGRYEEALANFDQAIS 986

Query: 259  KSHSYY----NLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIFPYYGLGQVQLKLGDF 313
                YY    N        G YE+A    +A++ + I+   ++   ++    +   LG +
Sbjct: 987  LQPDYYQTWDNRGLVLIKLGRYEEA----LANLDQAISLQPDYYQAWFNRSAMLSNLGRY 1042

Query: 314  RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID--- 370
            R ALT+ ++V+ + PD+ +     G    +LG+ E+A     +A  + P D Q +++   
Sbjct: 1043 REALTSDDQVISLQPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLNRGI 1102

Query: 371  -LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
             LGEL    +  A+ D   + +    +A     +  + + G  +F +  F    +  ++ 
Sbjct: 1103 ALGELGRHEEALASCDQAISLQPDYYQAWSNRGVAAMESFGYEYFWQQNFTDCFRLERNK 1162

Query: 430  LGDGIWLTLLDSKTKTYV------IDASASMLQFKDMQLFHRFENDGNHVELP 476
              D +  TL  +  + Y+      +++S ++L+    + F  F    N +E P
Sbjct: 1163 APDILIPTLKATNREHYLALFQASLNSSIALLK----ETFTDFPKVTNQLEQP 1211



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 84/394 (21%), Positives = 152/394 (38%), Gaps = 41/394 (10%)

Query: 45   GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 104
            GV    LG+ E      ++   L   YY            TW  +G  L   G  E+A +
Sbjct: 659  GVVLGELGRHEEALANFDQAISLQPDYYQ-----------TWDNRGAALFKLGRYEEALA 707

Query: 105  AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 164
             F  V+    D   A   +  V    GR+ ++L  + + + + P    A     G+   +
Sbjct: 708  NFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAW-FNRGVLLGE 766

Query: 165  LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
            LG+  +A  ++ + + L P++  A     V+     E    ++ +    +   + P    
Sbjct: 767  LGRYEEALTSYDQVISLQPDDSSAWFNRGVL---LGELGRHKEALTSYDQVISLQPDYYP 823

Query: 225  ALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAG 280
            A +         G+H       + ALA    V +  P   H+++    +    G YE+A 
Sbjct: 824  AWDNRGVVLGELGRH-------KEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEA- 875

Query: 281  LYYMASVKEINKPHEFIFPYYGLGQVQL-KLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
               +A+  +        +P +    V L +LG    AL NF++ + + PD        G 
Sbjct: 876  ---LANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQPDYYPAWDNRGV 932

Query: 340  IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKK 396
            + ++LG+ E+A     +A  + P   QA+   G  L  S+ G    AL  F  A +L   
Sbjct: 933  MLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVAL--SELGRYEEALANFDQAISLQPD 990

Query: 397  AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                   +  +N G++  + G +E A  +   A+
Sbjct: 991  Y-----YQTWDNRGLVLIKLGRYEEALANLDQAI 1019


>gi|390958075|ref|YP_006421832.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
 gi|390958416|ref|YP_006422173.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
 gi|390412993|gb|AFL88497.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
 gi|390413334|gb|AFL88838.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
          Length = 580

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 136/335 (40%), Gaps = 35/335 (10%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--I 108
           LG +  +QR  E+    A      A   D+         G +LLA  +   A+S FK  +
Sbjct: 174 LGTVTAQQRRYEQ----AEAQLEAALTADVRYVPAHAHLGSVLLALHQPAPAASEFKKAV 229

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
            L        A  G+A VE NR    D++   + ALQ  PS    +   + L R   G  
Sbjct: 230 DLGDASSATAAQFGRALVELNRA--DDAVAVLEPALQRDPSSLH-LMYALALARQAQGDA 286

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
             +   F + +  +PEN EAL    +  +Q  +AAG   G+ + Q A       A + N 
Sbjct: 287 AASLALFAKFVAAEPENAEALTNYGLALVQTGDAAG---GLRRYQAAL------AHSDNA 337

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYM 284
           L       G  +L +   + AL     G    P     +Y+L  +   K D   A     
Sbjct: 338 LLRQNI--GVAYLQQSDLDHALEQFRAGLAKEPGSVQLHYDLGLALKLKDDVAGA----- 390

Query: 285 ASVKEINKPHEF--IFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
               E+ K  E     P   Y LG ++++ G F+ A    +K + + P N E    LG +
Sbjct: 391 --TAELRKTEELDPNLPDAPYTLGVLEMQQGRFQEAAQQLQKAVMLEPHNGEAWALLGSV 448

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           Y Q G+ EKA E LR+A K+ P      I L  ++
Sbjct: 449 YRQGGESEKAAEALRQAIKLQPDAPGPHITLASVM 483



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 12/176 (6%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P+  H  Y LA +  ++GD   A L   A        +      YGL  VQ   GD    
Sbjct: 267 PSSLHLMYALALARQAQGD-AAASLALFAKFVAAEPENAEALTNYGLALVQT--GDAAGG 323

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           L  ++  L  + DN    + +G  Y+Q   ++ A E  R     +P   Q   DLG  L 
Sbjct: 324 LRRYQAAL-AHSDNALLRQNIGVAYLQQSDLDHALEQFRAGLAKEPGSVQLHYDLGLALK 382

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             D  A       A   L+K  E  P   +    +GV+  ++G F+ A Q  + A+
Sbjct: 383 LKDDVAG------ATAELRKTEELDPNLPDAPYTLGVLEMQQGRFQEAAQQLQKAV 432


>gi|386813873|ref|ZP_10101097.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403370|dbj|GAB63978.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 576

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/377 (21%), Positives = 148/377 (39%), Gaps = 82/377 (21%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           +  Y  K+ ++D+         G +   K   ++A+S FK  +E +  +  A      + 
Sbjct: 179 SITYLKKSIKLDLKNADAHFTLGLVYYTKSLYDKATSEFKQTIELNSKDAEAHNYLGLLY 238

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           + +G   +S+  +K AL    + P A    +G+  Y       A  AF++ L+L P+  E
Sbjct: 239 YQQGDLEESIAEHKAALLSDQNYPDAYN-NLGIALYAKNNTKDAIDAFKKTLELQPDFAE 297

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF----FFTGQHFLVE 243
           A   L ++  + N+    +  +  +++A ++ P  A A      HF     +T      E
Sbjct: 298 AYFNLGLIYSEENKT---KDAVSSLEQAIKLNPKIAEA------HFTLGEIYTKNDMQEE 348

Query: 244 QLTETALAVTNH---------------------------------GPTKSHSYYNLARSY 270
            L+E   A+ +                                   P  + +Y+NL  +Y
Sbjct: 349 ALSEYKKAIDSKPDYAEAYYNYAELNATKGMHDRSIAAWSKTIELNPNNTDAYFNLGIAY 408

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEF----------------------------IFP--- 299
           +++GD +KA   ++  V EIN P+++                            ++P   
Sbjct: 409 YNQGDLDKAISLWI-KVIEIN-PNDYDALINLADAYNAKGLLDKTIQTWEKITEVYPNHA 466

Query: 300 --YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             YY LG    K   + +AL  +EK +EI P+       LG  Y ++G+ + A E  +K 
Sbjct: 467 GLYYKLGNAYAKKNMYNTALVQWEKAIEIDPNLVNAYYNLGLTYQKIGKWDDAIEAYKKV 526

Query: 358 AKIDPRDAQAFIDLGEL 374
             I+  D  A  +LG L
Sbjct: 527 LDINADDIDAHRNLGLL 543



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 110/495 (22%), Positives = 206/495 (41%), Gaps = 61/495 (12%)

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
           A  E+  A S +KI   A++ +    LG A  +  +  +S+SL  +K +L+++PS     
Sbjct: 106 AIAELLAAVSYYKITQTAEKADAYNDLGLAYKD--KNAFSESLTAFKESLELNPSATDT- 162

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
              +GL  YK   L  +    +++++LD +N +A   L ++       +   K   + ++
Sbjct: 163 NYHVGLLYYKKNMLDDSITYLKKSIKLDLKNADAHFTLGLVYYT---KSLYDKATSEFKQ 219

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE--TALAVTNHGPTKSHSYYNLARSYHS 272
             E+    A A NYL   ++  G   L E + E   AL    + P    +Y NL  + ++
Sbjct: 220 TIELNSKDAEAHNYLGLLYYQQGD--LEESIAEHKAALLSDQNYPD---AYNNLGIALYA 274

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           K + + A     A  K +    +F   Y+ LG +  +    + A+++ E+ +++ P   E
Sbjct: 275 KNNTKDA---IDAFKKTLELQPDFAEAYFNLGLIYSEENKTKDAVSSLEQAIKLNPKIAE 331

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
               LG IY +    E+A    +KA    P  A+A+ +  EL       A       +  
Sbjct: 332 AHFTLGEIYTKNDMQEEALSEYKKAIDSKPDYAEAYYNYAEL------NATKGMHDRSIA 385

Query: 393 LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY---- 446
              K  E  P   +   N+G+ ++ +G+ + A           +W+ +++     Y    
Sbjct: 386 AWSKTIELNPNNTDAYFNLGIAYYNQGDLDKAI---------SLWIKVIEINPNDYDALI 436

Query: 447 -VIDA-SASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF-NLARLLEQIHDTVAASVLY 503
            + DA +A  L  K +Q               W K+T ++ N A L  ++ +  A   +Y
Sbjct: 437 NLADAYNAKGLLDKTIQ--------------TWEKITEVYPNHAGLYYKLGNAYAKKNMY 482

Query: 504 RLILFKYQ-------DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 556
              L +++       + V+AY  L    +       +IE   + L +N    +A   LG 
Sbjct: 483 NTALVQWEKAIEIDPNLVNAYYNLGLTYQKIGKWDDAIEAYKKVLDINADDIDAHRNLGL 542

Query: 557 LELKNDDWVKAKETF 571
           L  + D  V+A+  F
Sbjct: 543 LYKEKDMHVEAESEF 557



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 94/441 (21%), Positives = 174/441 (39%), Gaps = 70/441 (15%)

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           F  +LT F++ LE+ P   +T   +G +Y +   ++ +   L+K+ K+D ++A A   LG
Sbjct: 142 FSESLTAFKESLELNPSATDTNYHVGLLYYKKNMLDDSITYLKKSIKLDLKNADAHFTLG 201

Query: 373 ELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 431
            +  + S    A   FK    L  K  E       N +G++++++G+ E +         
Sbjct: 202 LVYYTKSLYDKATSEFKQTIELNSKDAE-----AHNYLGLLYYQQGDLEES--------- 247

Query: 432 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 491
                          + +  A++L            +D N+ +  +N      NL   L 
Sbjct: 248 ---------------IAEHKAALL------------SDQNYPD-AYN------NLGIALY 273

Query: 492 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 551
             ++T  A   ++  L    D+ +AY  L  I    N  + ++  + +A+K+N K   A 
Sbjct: 274 AKNNTKDAIDAFKKTLELQPDFAEAYFNLGLIYSEENKTKDAVSSLEQAIKLNPKIAEAH 333

Query: 552 SMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 611
             LG++  KND     +E       A D K  YA      +NY A L   K        H
Sbjct: 334 FTLGEIYTKND---MQEEALSEYKKAIDSKPDYAE---AYYNY-AELNATK------GMH 380

Query: 612 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 671
            +++   +++ I  + +N  A    G+    +G  D +  L+ +V E           D 
Sbjct: 381 -DRSIAAWSKTIELNPNNTDAYFNLGIAYYNQGDLDKAISLWIKVIEINPNDY-----DA 434

Query: 672 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 731
            INLA  Y A+G     ++ ++       Y   A +   L   + +   +        +A
Sbjct: 435 LINLADAYNAKGLLDKTIQTWEKITE--VYPNHAGLYYKLGNAYAKKNMYNTALVQWEKA 492

Query: 732 IHLAPSNYTLRFDAGVAMQKF 752
           I + P+     ++ G+  QK 
Sbjct: 493 IEIDPNLVNAYYNLGLTYQKI 513


>gi|294673103|ref|YP_003573719.1| hypothetical protein PRU_0335 [Prevotella ruminicola 23]
 gi|294472071|gb|ADE81460.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
          Length = 1106

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 137/322 (42%), Gaps = 44/322 (13%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLG-------IGLCRYKLGQLGKARQAFQRALQ--- 180
           G Y+ +LE+ K+AL +     G   LG       IG    ++G   KA +  ++AL    
Sbjct: 601 GDYNKALEYQKQALNILEKVLGKEHLGTARLYSNIGNVYSEIGNYDKALEFHKKALYIRE 660

Query: 181 --LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI--------YPYCAMALNYLA 230
             L  E+ +   +   +     +       +E  ++A +I        +P  A + N + 
Sbjct: 661 KILGKEHSDTAGSYNNIGNVYKDIGNYDHALEFHKKALDIREKVWDKEHPDTASSYNNIG 720

Query: 231 NHFFFTGQHFLVEQLTETALAVT-----NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
           N +   G +    +  + AL +         P  + +Y N+   Y++ G+Y+KA  YY  
Sbjct: 721 NTYNDLGNYDKALECHKHALDICEKVLGKEHPNTAMAYNNIGNVYNNLGNYDKALEYYKQ 780

Query: 286 SVKEINKPHEFIFP-----YYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCE 332
           +++   K H    P     YY +G +   +G++  AL  +   LEI        +PD   
Sbjct: 781 ALEIRKKVHGKDHPDTASSYYNIGVLYKDIGNYDHALEYYMIALEIREKVLGAEHPDTVR 840

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA-FKTAR 391
           T + LGH+Y+ +G    A + L KAA +   +AQ +I  G +    + G  ++  +  A 
Sbjct: 841 TYRKLGHLYLNIGDNNLASQWLEKAATLGDTNAQFYI--GHMY---EIGKGVEKNYVVAA 895

Query: 392 TLLKKAGEEVPIEVLNNIGVIH 413
               KA E+       N+G+I+
Sbjct: 896 EWYSKAAEQGDARAQYNLGLIY 917



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 155/374 (41%), Gaps = 50/374 (13%)

Query: 107 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL-------GIG 159
           KI+ +   D V        V ++ G Y  +LE++K AL +     G   L        IG
Sbjct: 451 KILGKEHPDTVRTYSNIGIVYYDFGNYDKALEYHKHALDIREKVLGKEHLDTADSYNNIG 510

Query: 160 LCRYKLGQLGKARQAFQRALQ-----LDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
           L  +  G   KA +  ++AL      L  ++++   +   + +         K +E  + 
Sbjct: 511 LVYFDFGNYDKALEFHKKALDIREKVLGKDHLDTTGSYNNIGIGYYHLGNYDKALEYHKH 570

Query: 215 AFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH----- 261
           A EI        +P  AMA   +   +   G +    +  + AL +      K H     
Sbjct: 571 ALEICEKVLGKEHPNTAMAYTNIGLVYLELGDYNKALEYQKQALNILEKVLGKEHLGTAR 630

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASV----KEINKPH-EFIFPYYGLGQVQLKLGDFRSA 316
            Y N+   Y   G+Y+KA  ++  ++    K + K H +    Y  +G V   +G++  A
Sbjct: 631 LYSNIGNVYSEIGNYDKALEFHKKALYIREKILGKEHSDTAGSYNNIGNVYKDIGNYDHA 690

Query: 317 LTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI-------- 360
           L   +K L+I        +PD   +   +G+ Y  LG  +KA E  + A  I        
Sbjct: 691 LEFHKKALDIREKVWDKEHPDTASSYNNIGNTYNDLGNYDKALECHKHALDICEKVLGKE 750

Query: 361 DPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKA-GEEVPIEVLN--NIGVIHFEK 416
            P  A A+ ++G +  +  +   AL+ +K A  + KK  G++ P    +  NIGV++ + 
Sbjct: 751 HPNTAMAYNNIGNVYNNLGNYDKALEYYKQALEIRKKVHGKDHPDTASSYYNIGVLYKDI 810

Query: 417 GEFESAHQSFKDAL 430
           G ++ A + +  AL
Sbjct: 811 GNYDHALEYYMIAL 824



 Score = 46.6 bits (109), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 46/266 (17%)

Query: 210 EKMQRAFEIYPYC---AMALNYLANH---FFFTGQHFLVEQ-LTETALAVTN-------- 254
           E++++A EIY      A  +NY  +    FF+    FL +  + + A+ + N        
Sbjct: 350 ERIKQAEEIYKLADAIAQEINYDQDKYIDFFWEYSGFLRDHAIFDNAIEIHNRQIKMCED 409

Query: 255 -HG---PTKSHSYYNLARSYHSKGDYEKAGLYYMASV----KEINKPH-EFIFPYYGLGQ 305
            HG   P  + SY N+       G+Y+KA  Y+  ++    K + K H + +  Y  +G 
Sbjct: 410 FHGKVHPDTARSYNNIGIVNDCLGNYDKALKYFEQALNIREKILGKEHPDTVRTYSNIGI 469

Query: 306 VQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           V    G++  AL   +  L+I        + D  ++   +G +Y   G  +KA E  +KA
Sbjct: 470 VYYDFGNYDKALEYHKHALDIREKVLGKEHLDTADSYNNIGLVYFDFGNYDKALEFHKKA 529

Query: 358 AKI----------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA-GEEVPIEVL 406
             I          D   +   I +G   +  +   AL+  K A  + +K  G+E P   +
Sbjct: 530 LDIREKVLGKDHLDTTGSYNNIGIGYYHL-GNYDKALEYHKHALEICEKVLGKEHPNTAM 588

Query: 407 --NNIGVIHFEKGEFESAHQSFKDAL 430
              NIG+++ E G++  A +  K AL
Sbjct: 589 AYTNIGLVYLELGDYNKALEYQKQAL 614


>gi|148255708|ref|YP_001240293.1| hypothetical protein BBta_4342 [Bradyrhizobium sp. BTAi1]
 gi|146407881|gb|ABQ36387.1| putative TPR repeat protein [Bradyrhizobium sp. BTAi1]
          Length = 1406

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 46/252 (18%)

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG AC +   GR+++++  Y+RAL + P+ P A+ L IG C+  +GQ   A + +QRAL 
Sbjct: 192 LGDACRQL--GRHAEAIAHYERALTLQPNAP-AVLLNIGGCQQAIGQTEAAVRTYQRALV 248

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L P   EA   L  + L+ N                  +P           H+       
Sbjct: 249 LSPHLAEAHYNLGNLHLEMNS-----------------WPIAVF-------HY------- 277

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
                 E A+A     P    ++ NLA +  S+G +E+A  +Y  +++   +P  +   +
Sbjct: 278 ------ERAIA---ERPDFPEAHNNLANALQSRGRHEEALAHYDEALRR--RP-SYAIAH 325

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
                    +  F  A+  +   L + P +  TL  L  + + +G++++A++  R A  I
Sbjct: 326 RNRADTLRNMKRFDEAIAGYHDALALEPADTTTLNHLAGVLMIVGRLDEAEQAYRSALAI 385

Query: 361 DPRDAQAFIDLG 372
           +PR+    ++ G
Sbjct: 386 NPRNIGVHLNYG 397



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 10/288 (3%)

Query: 87   VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
            V   + L  +G+   A + F+++L        AL+G   +     R  ++ + ++RA+ V
Sbjct: 786  VAVARKLQGRGDNNDAEAIFRLILAGQPRQFDALVGLGMICSGSSRLDEAKDCFQRAVAV 845

Query: 147  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 206
            +     A    IG      G+   A   ++ AL L P +   L A A++  + N+     
Sbjct: 846  NAKSAEA-HGSIGAVEASAGRYDAAVGHYETALSLSPNHPGILYAFAMV--RQNQGMS-E 901

Query: 207  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
            + M  ++RA E  P    A   L N  +  G+     +  +  L V    P  + ++ N+
Sbjct: 902  EAMVLLRRAIENKPQHLDAHFALGNLLYTAGKDI---EAAKCYLKVLEFSPEHAETHNNI 958

Query: 267  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
            A     +G  E+A  +Y  ++   ++P ++   Y  LG   L+L     A+      L++
Sbjct: 959  ANVLLRQGHRERAIEHYKRAIA--SRP-DYGDAYGNLGNAYLELNRLEEAIEQNLLALKL 1015

Query: 327  YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             P+   +   LG  Y  LG+ E+A     KA ++ P DA   ++L  +
Sbjct: 1016 KPERFGSYNNLGVAYQALGRFEEATAAFEKALELAPDDAPIHLNLANM 1063



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 13/260 (5%)

Query: 171  ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
            A   F+  L   P   +ALV L ++    + ++ + +  +  QRA  +    A A   + 
Sbjct: 801  AEAIFRLILAGQPRQFDALVGLGMI---CSGSSRLDEAKDCFQRAVAVNAKSAEAHGSIG 857

Query: 231  NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
                  G++       ETAL+++   P      Y  A    ++G  E+A +    +++  
Sbjct: 858  AVEASAGRYDAAVGHYETALSLS---PNHPGILYAFAMVRQNQGMSEEAMVLLRRAIE-- 912

Query: 291  NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
            NKP + +  ++ LG +    G    A   + KVLE  P++ ET   + ++ ++ G  E+A
Sbjct: 913  NKP-QHLDAHFALGNLLYTAGKDIEAAKCYLKVLEFSPEHAETHNNIANVLLRQGHRERA 971

Query: 351  QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 410
             E  ++A    P    A+ +LG   +  +     +A +     LK   E       NN+G
Sbjct: 972  IEHYKRAIASRPDYGDAYGNLGNAYL--ELNRLEEAIEQNLLALKLKPER--FGSYNNLG 1027

Query: 411  VIHFEKGEFESAHQSFKDAL 430
            V +   G FE A  +F+ AL
Sbjct: 1028 VAYQALGRFEEATAAFEKAL 1047


>gi|340052786|emb|CCC47071.1| conserved hypothetical protein, fragment [Trypanosoma vivax Y486]
          Length = 1158

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 5/169 (2%)

Query: 69  TQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVE 127
           + Y    S   MH       +G   +A G  ++ AS  F+    AD   V A LG A V 
Sbjct: 67  SSYMADVSSSHMHNAVVLYLEGLAAMASGTGLQTASVKFEEASRADPHFVIARLGLAAVH 126

Query: 128 FNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
           + RG Y +S   Y+  LQ   S  P  +R+G+GLC Y+L +L  A++  +RAL+++ ++ 
Sbjct: 127 YYRGHYKESFSQYRVVLQTLGSKAPPIVRVGMGLCAYRLNRLDYAQKMLERALEVNSDDE 186

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
            AL+ L V+ L   +   + K +E + R   I P  A+ +  +++  +F
Sbjct: 187 LALLVLLVIFLDCRQ---MSKVIEVVGRLRLILPTNAVVILKVSDLVYF 232



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 155/744 (20%), Positives = 299/744 (40%), Gaps = 93/744 (12%)

Query: 158  IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
            +GLC Y+L +L  A++  +RAL+++ ++  AL+ L V+ L   +   + K +E + R   
Sbjct: 402  MGLCAYRLNRLDYAQKMLERALEVNSDDELALLVLLVIFLDCRQ---MSKVIEVVGRLRL 458

Query: 218  IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
            I P  A+ +  +++  +F      V Q    A A     P+ S                 
Sbjct: 459  ILPTNAVVILKVSDLVYFRA----VAQGRVKAFA-----PSISR---------------- 493

Query: 278  KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
                  +  V+ +    E     Y  G++ + LG+F  A    +  L+  P+        
Sbjct: 494  -----LLTEVRGVANLEEAAIADYQEGRLNMALGNFSKARVLLDAALQTLPNLLAARIHY 548

Query: 338  GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 397
              + +  G+ ++++++L +     P   +  + LG         A L   + A    K+ 
Sbjct: 549  ARLLLLSGKDKESEQMLLRINAEHPNQKEVLLMLGA------QAARLGLHERALECSKRL 602

Query: 398  GEEVPIEVLNNIGVIHF-------EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 450
             E V  E + +  +  +       E  +F S     +  +G           T T ++  
Sbjct: 603  TEGVAPEDIRSWSLASWCARLNKEEARKFSSLVARIQKEMG---------KTTPTQLLVN 653

Query: 451  SASMLQFKDMQLFHRF---ENDGNHVELPWNKVT---VLFNLARLLEQIHDTVAASVLYR 504
             A++   KD+    R    E   + + LP   V    ++FNLA LLE+  D V +  LY 
Sbjct: 654  IATL--NKDVDGLQRILDQELGADVLSLPTLAVAHIPIVFNLALLLEE-KDRVRSRQLYI 710

Query: 505  LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
             ++ K+  +   Y RL  +AK    L+ ++  +    ++    P +++ LG L  +   +
Sbjct: 711  FLVKKHGYFQLPYFRLHELAKTDGLLKQAVAWLVLLQQIVPDEPYSIASLGQLLFEQQRF 770

Query: 565  VKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIV 624
            + +    R+      G+     L LG     A LR  +   +     +  A++ ++ V+ 
Sbjct: 771  MASLSVLRS----VKGRPLPVVLGLGA----AYLRCGQHHWEDSRRFVSGARDRFSFVLR 822

Query: 625  QHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 684
            +   N+ AA+G    L  +GQ++  + L  +V E      +++      ++A+     G+
Sbjct: 823  RDKGNMLAAHGLACCLGLEGQYECCQSLLDRVGEVLPNCQYIRR-HYGAHMANAKILSGS 881

Query: 685  FALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFD 744
            F    K  ++ L +    T  Q +  LA      E++ +    L  A+   P++  L ++
Sbjct: 882  F----KQARDYLERDKQRTPLQ-MSSLAFCLLSEERYSEAIAVLTEAMDACPNHSFLLYN 936

Query: 745  -AGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSH-LSAASNLHLHGFDEKKINT 802
             A V    F AS   K   T DE RS    L   + + +  +    N       +  +  
Sbjct: 937  LALVHCASFVASVSSKQALTIDEARSLRRSLATGLEIANRFIKINGNSQTLRVAQTFLRF 996

Query: 803  HVEYCKHL-------LDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 855
               YC  L       L AA +  +AA   E+QN    E  R+   +    ++A ++++  
Sbjct: 997  VCIYCVDLNDREIKKLIAAGL--QAAAEFEKQN----ELWRRVFGSYIEEKRAADERREA 1050

Query: 856  LEKRKLEDEQKRLRQQEEHFQRVK 879
             E+++ E EQ+  R+  E F R +
Sbjct: 1051 DERKRCEQEQQLAREILEGFNRAR 1074


>gi|124024786|ref|YP_001013902.1| hypothetical protein NATL1_00731 [Prochlorococcus marinus str.
           NATL1A]
 gi|123959854|gb|ABM74637.1| Hypothetical protein NATL1_00731 [Prochlorococcus marinus str.
           NATL1A]
          Length = 816

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 153/352 (43%), Gaps = 24/352 (6%)

Query: 87  VGKGQLL------LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 140
           + KGQ++       A+G +++A+  ++  ++    +   L     +    G   ++   Y
Sbjct: 42  LSKGQIINQAIQFHAQGNIQKAAKYYQYFIDQGFKDPRVLANYGVILKGFGNSQEAELLY 101

Query: 141 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 200
           ++A++++P+   A    +G     LG+L +A  ++++A+++ P     L  L  +    +
Sbjct: 102 RKAIELNPNFADA-HYNLGNTLRDLGKLKEAELSYRKAIEISPNYANTLYNLGTI---LS 157

Query: 201 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
           +   ++      ++A  I P    A   L N     G+    E     A+ ++   P  +
Sbjct: 158 DLGKLQDAEFSYRQAIIINPNYTEAHYNLGNTLRDLGKLKDAELSYRKAIKIS---PNYA 214

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
             + NL       G  + A LY   + K I    +F   Y  LG +   LG+ + A  + 
Sbjct: 215 KVHCNLGTILRDLGKLKDAELY---TRKAIQLNPDFAEAYSNLGNILSDLGNLKEAEISQ 271

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
           +K +E+ PD  E    LG+I   LG+++ A+   RKA +I P  A A  +LG +L   D 
Sbjct: 272 KKTIELKPDCAEAHSNLGNILRDLGKLKDAELSYRKAIEISPNYANAHSNLGNIL--RDL 329

Query: 381 GAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           G      K A    +KA E  P       N+G I  + G F  A + FK AL
Sbjct: 330 G----KLKGAELSYRKAIEISPNYANAHYNLGNILKDIGNFGDALKQFKQAL 377



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 131/310 (42%), Gaps = 20/310 (6%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  + ++YNL  +    G  ++A L Y    K I     +    Y LG +   LG  + A
Sbjct: 109 PNFADAHYNLGNTLRDLGKLKEAELSYR---KAIEISPNYANTLYNLGTILSDLGKLQDA 165

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
             ++ + + I P+  E    LG+    LG+++ A+   RKA KI P  A+   +LG +L 
Sbjct: 166 EFSYRQAIIINPNYTEAHYNLGNTLRDLGKLKDAELSYRKAIKISPNYAKVHCNLGTIL- 224

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
             D G      K A    +KA +  P   E  +N+G I  + G  + A  S K      I
Sbjct: 225 -RDLGK----LKDAELYTRKAIQLNPDFAEAYSNLGNILSDLGNLKEAEISQKKT----I 275

Query: 435 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 494
            L    ++  + + +    + + KD +L +R       +E+  N      NL  +L  + 
Sbjct: 276 ELKPDCAEAHSNLGNILRDLGKLKDAELSYR-----KAIEISPNYANAHSNLGNILRDLG 330

Query: 495 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 554
               A + YR  +    +Y +A+  L  I K   N   +++   +ALK+N +   A   L
Sbjct: 331 KLKGAELSYRKAIEISPNYANAHYNLGNILKDIGNFGDALKQFKQALKLNNELSLAKYAL 390

Query: 555 GDLELKNDDW 564
              + K  DW
Sbjct: 391 IITKGKICDW 400



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 16/284 (5%)

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G+ ++A L Y  ++ E+N    F   +Y LG     LG  + A  ++ K +EI P+   T
Sbjct: 92  GNSQEAELLYRKAI-ELNP--NFADAHYNLGNTLRDLGKLKEAELSYRKAIEISPNYANT 148

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 393
           L  LG I   LG+++ A+   R+A  I+P   +A  +LG  L   D G   DA  + R  
Sbjct: 149 LYNLGTILSDLGKLQDAEFSYRQAIIINPNYTEAHYNLGNTL--RDLGKLKDAELSYRKA 206

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
           +K +     +    N+G I  + G+ + A    + A    I L    ++  + + +  + 
Sbjct: 207 IKISPNYAKVHC--NLGTILRDLGKLKDAELYTRKA----IQLNPDFAEAYSNLGNILSD 260

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
           +   K+ ++  +       +EL  +      NL  +L  +     A + YR  +    +Y
Sbjct: 261 LGNLKEAEISQK-----KTIELKPDCAEAHSNLGNILRDLGKLKDAELSYRKAIEISPNY 315

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
            +A+  L  I +    L+ +     +A++++  Y NA   LG++
Sbjct: 316 ANAHSNLGNILRDLGKLKGAELSYRKAIEISPNYANAHYNLGNI 359



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 61/297 (20%), Positives = 116/297 (39%), Gaps = 58/297 (19%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQACVEFN 129
           Y KA  I  +  +T    G +L   G+++ A  +++  I++  +       LG    +  
Sbjct: 135 YRKAIEISPNYANTLYNLGTILSDLGKLQDAEFSYRQAIIINPNYTEAHYNLGNTLRDL- 193

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
            G+  D+   Y++A+++ P+    +   +G     LG+L  A    ++A+QL+P+  EA 
Sbjct: 194 -GKLKDAELSYRKAIKISPNY-AKVHCNLGTILRDLGKLKDAELYTRKAIQLNPDFAEAY 251

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
             L  +    ++   +++     ++  E+ P CA A                        
Sbjct: 252 SNLGNI---LSDLGNLKEAEISQKKTIELKPDCAEA------------------------ 284

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LG 304
                      HS  NL       G  + A L Y  +++        I P Y      LG
Sbjct: 285 -----------HS--NLGNILRDLGKLKDAELSYRKAIE--------ISPNYANAHSNLG 323

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            +   LG  + A  ++ K +EI P+       LG+I   +G    A +  ++A K++
Sbjct: 324 NILRDLGKLKGAELSYRKAIEISPNYANAHYNLGNILKDIGNFGDALKQFKQALKLN 380


>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
 gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 1276

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 144/325 (44%), Gaps = 24/325 (7%)

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           E   + + ALL Q    FN   Y  +L+  ++ L + P+   A   G G+  + LG+  +
Sbjct: 12  EPVNEEIEALLNQGRDHFNAQNYQAALDALEQVLTLEPNKVEAWN-GQGVVLFNLGKHQE 70

Query: 171 ARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
           A Q+F +AL+L+     A     +A++ L   E A     +    +A E+ P  A A   
Sbjct: 71  ALQSFNKALELNSNEANAWNYRGVALLHLGKYEEA-----LSTFDKALELNPNYAEA--- 122

Query: 229 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
           L+N  F  G+    ++   T        P  + + +N   +      Y++A   Y  ++ 
Sbjct: 123 LSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKAL- 181

Query: 289 EINKPHEFIFPYYG--LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
           E+N  +   + Y G  LG    KL  ++ AL  F+K LE+ P+N E     G   V L +
Sbjct: 182 ELNPNNAVAWNYRGVALG----KLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLER 237

Query: 347 IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEV 405
            ++A +   KA K++P   +A+   G  L S +    AL+AF  AR L     E      
Sbjct: 238 YQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAES----- 292

Query: 406 LNNIGVIHFEKGEFESAHQSFKDAL 430
            NN GV   +   ++ A QS+  A+
Sbjct: 293 WNNRGVALEKLERYQEAFQSYDQAI 317



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 174/404 (43%), Gaps = 62/404 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q +NKA  ++ +E + W  +G  LL  G+ E+A S F   LE + +   AL  +  V 
Sbjct: 71  ALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVL 130

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
               RY ++L  + +AL+++P+   A+    G+   +L +  +A Q++ +AL+L+P N  
Sbjct: 131 GKLERYQEALPTFDKALELNPNYAEAL-FNRGVALERLERYQEAFQSYDKALELNPNNAV 189

Query: 188 AL----VALA--------------VMDLQANEAA-----GI--------RKGMEKMQRAF 216
           A     VAL                ++L  N A      G+        ++ ++  ++A 
Sbjct: 190 AWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKAL 249

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHS 272
           ++ P    A NY        G      +  + AL   +      P  + S+ N   +   
Sbjct: 250 KLNPNYGEAWNY-------RGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEK 302

Query: 273 KGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
              Y++A   Y  +++  +N    +    + LG    KL  +  A  +F++ +++ P+  
Sbjct: 303 LERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLG----KLERYEEAFQSFDQAIKLNPNYA 358

Query: 332 ETLKALGHIYVQLGQIEKAQELLR---KAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           E     G   + LG +E+ +E  +   +A K++P  A+A+ + G  L        L+ ++
Sbjct: 359 EAWNYRG---LALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVAL------GMLERYE 409

Query: 389 TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            A     +A +  P   +  NN GV       +E A QSF  A+
Sbjct: 410 EAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAI 453



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 168/399 (42%), Gaps = 52/399 (13%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q Y KA +++ +    W  +G  L +    ++A  AF    E + +N  +   +    
Sbjct: 241 ALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVAL 300

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
               RY ++ + Y +A+Q++ +   A     G    KL +  +A Q+F +A++L+P   E
Sbjct: 301 EKLERYQEAFQSYDQAIQLNLNDAQAW-YNRGFPLGKLERYEEAFQSFDQAIKLNPNYAE 359

Query: 188 ALV--ALAVMDLQANEAA---------------------GIRKGM-EKMQRAFEIY---- 219
           A     LA+ +L+  E A                     G+  GM E+ + AF+ Y    
Sbjct: 360 AWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAI 419

Query: 220 ---PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
              P  A A N   N     G     E+  ++        P  + ++YN   +      Y
Sbjct: 420 KLNPNHAQAWN---NRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERY 476

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
           ++A   Y  ++K +N    +   +Y  G    KL  ++ AL ++++ +++ P+  E    
Sbjct: 477 QEALQSYDQAIK-LNP--NYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYN 533

Query: 337 LGHIYVQLGQIEKAQELLR---KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 393
            G     LG +E  QE  +   KA +++P DA+A+ + G  L +      L+ ++ A   
Sbjct: 534 RG---FALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRN------LERYQEALQS 584

Query: 394 LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             KA +  P   E L N GV       +E A QSF  A+
Sbjct: 585 YDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKAI 623



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 133/322 (41%), Gaps = 54/322 (16%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q+Y++A +++ +    W  +G  L      E+A  +F   ++ + ++  A   Q    
Sbjct: 411 AFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVAL 470

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
               RY ++L+ Y +A++++P+   A     G+   KL +  +A Q++ +A++L+P   E
Sbjct: 471 GKLERYQEALQSYDQAIKLNPNYAEAW-YNQGVALGKLERYQEALQSYDQAIKLNPNYAE 529

Query: 188 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A      A+ +L+  + A      +   +A ++ P  A A N                  
Sbjct: 530 AWYNRGFALGNLECYQEA-----FQSFDKAIQLNPNDAEAWN------------------ 566

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
                        +  S  NL R   +   Y+KA          I     +    +  G 
Sbjct: 567 ------------NRGFSLRNLERYQEALQSYDKA----------IQLNPNYAEALFNRGV 604

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK--AAKIDPR 363
              +L  +  A  +F+K +++ P+N E     G   V LG++E+ QE +     A +  R
Sbjct: 605 ALERLERYEEAFQSFDKAIQLNPNNTEAWYNRG---VVLGKLERHQEAIASYDQALVIKR 661

Query: 364 DAQ-AFIDLGELLISSDTGAAL 384
           D   A+I+ G L+ S  +G  L
Sbjct: 662 DFYLAWINRGNLIYSLSSGNFL 683


>gi|255528197|ref|ZP_05395020.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
           P7]
 gi|296184633|ref|ZP_06853044.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
 gi|255508112|gb|EET84529.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
           P7]
 gi|296050415|gb|EFG89838.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
          Length = 698

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 14/318 (4%)

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD--NVPA 119
           E+ F  A   Y KA  +D +    +   G   +   E E A  +++ VL+ D D  +V +
Sbjct: 229 EKKFKSAKINYLKAIELDSNNILAYYNLGNTQVILNEYEDAKKSYEKVLKLDSDHKDVHS 288

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
            LG    +     Y D+ + Y + ++++P    A   G+ L   +L +  +A    ++ +
Sbjct: 289 NLGNIYSDL--KLYDDAKKMYNKEIELYPESVNA-YYGLALLYEELEEFKEALDIIEKII 345

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            +DP +  A   +A  ++Q N         ++ + A  I P    A N      +   ++
Sbjct: 346 VIDPNDYNAYKMIA--NIQVN-MRNYDIAEKQYKNAININPNYGDAYNDYGVLLYKLKRY 402

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
              ++L + A+ +    P +   Y NLA S +  G   +A   Y  +++      E    
Sbjct: 403 EESKELCKKAIDL---NPYECIYYNNLANSLNELGLLGEAMQVYETAIRFNPNNSEL--- 456

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y  L     K  +   A+ N+EK +E+ P   E    LG IY++L   +KA   ++KA K
Sbjct: 457 YCNLATALQKSNNIEDAIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIK 516

Query: 360 IDPRDAQAFIDLGELLIS 377
           ID   AQAF +LG +L S
Sbjct: 517 IDKNLAQAFFNLGNVLFS 534



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 18/272 (6%)

Query: 132 RYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           RY +S E  K+A+ ++P  C     L   L   +LG LG+A Q ++ A++ +P N E   
Sbjct: 401 RYEESKELCKKAIDLNPYECIYYNNLANSLN--ELGLLGEAMQVYETAIRFNPNNSELYC 458

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
            LA    ++N    I   ++  +++ E+ P  A A N L + +     +       + A+
Sbjct: 459 NLATALQKSN---NIEDAIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAI 515

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
            +       + +++NL     S G Y ++   Y   +K  N   E    Y+ LG    +L
Sbjct: 516 KI---DKNLAQAFFNLGNVLFSLGRYSESVQAYKKYIKLDNSNFEV---YFKLGNALYEL 569

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
            +F+ A+  + K +EI  +   +   L + +     I +A +   K   IDP   +A+ +
Sbjct: 570 KEFKKAIDMYLKSIEINSNYTHSNFNLANTFYTTNNINEAIKYYEKVISIDPLYIEAYNN 629

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVP 402
           LG +        AL  +K A+   + A +  P
Sbjct: 630 LGTMF------CALKDYKKAKGCYQIAIKNNP 655



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 50/245 (20%), Positives = 98/245 (40%), Gaps = 44/245 (17%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y K+  ++      +   G + +   + ++A++  K  ++ D++   A      V 
Sbjct: 473 AIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVL 532

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           F+ GRYS+S++ YK+ +++  S    +   +G   Y+L +  KA   + ++++++     
Sbjct: 533 FSLGRYSESVQAYKKYIKLDNS-NFEVYFKLGNALYELKEFKKAIDMYLKSIEINSN--- 588

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                                            Y     N LAN F+ T     + +  +
Sbjct: 589 ---------------------------------YTHSNFN-LANTFYTTNN---INEAIK 611

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
               V +  P    +Y NL   + +  DY+KA   Y  ++K  N P+ F   YY L   Q
Sbjct: 612 YYEKVISIDPLYIEAYNNLGTMFCALKDYKKAKGCYQIAIK--NNPN-FALGYYSLATTQ 668

Query: 308 LKLGD 312
             LG+
Sbjct: 669 YMLGE 673



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 99/498 (19%), Positives = 195/498 (39%), Gaps = 75/498 (15%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ KG  L  + + + A   +   +E D +N+ A       +     Y D+ + Y++ L+
Sbjct: 219 YLYKGIFLYEEKKFKSAKINYLKAIELDSNNILAYYNLGNTQVILNEYEDAKKSYEKVLK 278

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 205
           +  S    +   +G     L     A++ + + ++L PE+V A   LA+      E    
Sbjct: 279 LD-SDHKDVHSNLGNIYSDLKLYDDAKKMYNKEIELYPESVNAYYGLAL---LYEELEEF 334

Query: 206 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY-- 263
           ++ ++ +++   I P    A   +AN       + + E+  + A+   N  P    +Y  
Sbjct: 335 KEALDIIEKIIVIDPNDYNAYKMIANIQVNMRNYDIAEKQYKNAI---NINPNYGDAYND 391

Query: 264 -----YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
                Y L R   SK   +KA         ++N P+E I+ Y  L     +LG    A+ 
Sbjct: 392 YGVLLYKLKRYEESKELCKKAI--------DLN-PYECIY-YNNLANSLNELGLLGEAMQ 441

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS 378
            +E  +   P+N E    L     +   IE A +   K+ +++P+ A+A+ +LG + I  
Sbjct: 442 VYETAIRFNPNNSELYCNLATALQKSNNIEDAIKNYEKSIELNPKLAEAYNNLGSIYIE- 500

Query: 379 DTGAALDAFKTARTLLKKAG--EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 436
                L+ +K A   +KKA   ++   +   N+G + F  G +  + Q++K         
Sbjct: 501 -----LEDYKKATNYIKKAIKIDKNLAQAFFNLGNVLFSLGRYSESVQAYKK-------- 547

Query: 437 TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 496
                                              +++L  +   V F L   L ++ + 
Sbjct: 548 -----------------------------------YIKLDNSNFEVYFKLGNALYELKEF 572

Query: 497 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 556
             A  +Y   +    +Y  +   LA      NN+  +I+   + + ++  Y  A + LG 
Sbjct: 573 KKAIDMYLKSIEINSNYTHSNFNLANTFYTTNNINEAIKYYEKVISIDPLYIEAYNNLGT 632

Query: 557 LELKNDDWVKAKETFRAA 574
           +     D+ KAK  ++ A
Sbjct: 633 MFCALKDYKKAKGCYQIA 650


>gi|94971753|ref|YP_593801.1| hypothetical protein Acid345_4728 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553803|gb|ABF43727.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
          Length = 718

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 51/292 (17%)

Query: 140 YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 199
           YK    V PS   A RL +    ++ G+L  A + +++ L+ DP NVEAL +L+++  Q 
Sbjct: 19  YKLCCLVRPS--NAARLMMAREHHEAGRLQPAAKIYEQVLRGDPNNVEALHSLSILASQI 76

Query: 200 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
            E A   +    M++   + P    AL+                                
Sbjct: 77  GETATAER---LMRQVLSLQPEHVGALS-------------------------------- 101

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
                NL  +  S+G  E A   Y   +    +PH     +  LG ++L  GD   A+ +
Sbjct: 102 -----NLGITLQSQGRQEDAIACYEKVIAL--RPHH-AEAHNNLGNLRLAQGDLEQAIAS 153

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-S 378
           +++ L++ PD  +    LG+ Y + G   +A+E  R+A    P   +A  +LG +L    
Sbjct: 154 YQRALDLKPDYADAHYNLGNAYQRRGNWTQARESYRRAVASRPEFPEAQNNLGVVLREMG 213

Query: 379 DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           +T AA++AF+ A  L  +  +      LNN+GV   E+G   +A + +  A+
Sbjct: 214 ETSAAIEAFERAIALRAEYADP-----LNNLGVALQEQGRMSAAVEHYHQAI 260



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 44/279 (15%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G ++ A+  ++ VL  D +NV AL   + +    G  + +    ++ L + P   GA+  
Sbjct: 43  GRLQPAAKIYEQVLRGDPNNVEALHSLSILASQIGETATAERLMRQVLSLQPEHVGALS- 101

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G+     G+   A   +++ + L P + EA   L  + L   +   + + +   QRA 
Sbjct: 102 NLGITLQSQGRQEDAIACYEKVIALRPHHAEAHNNLGNLRLAQGD---LEQAIASYQRAL 158

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           ++ P      +Y                               + ++YNL  +Y  +G++
Sbjct: 159 DLKP------DY-------------------------------ADAHYNLGNAYQRRGNW 181

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            +A   Y  +V   ++P EF      LG V  ++G+  +A+  FE+ + +  +  + L  
Sbjct: 182 TQARESYRRAVA--SRP-EFPEAQNNLGVVLREMGETSAAIEAFERAIALRAEYADPLNN 238

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           LG    + G++  A E   +A  + P D +A  +LG  L
Sbjct: 239 LGVALQEQGRMSAAVEHYHQAIALRPADVEAHFNLGSAL 277



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 12/179 (6%)

Query: 16  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 75
           QI E  ++  +      ++ E +  L+ LG+       ++++ R+++     A   Y K 
Sbjct: 75  QIGETATAERLMRQVLSLQPEHVGALSNLGI------TLQSQGRQED-----AIACYEKV 123

Query: 76  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 135
             +  H        G L LA+G++EQA ++++  L+   D   A          RG ++ 
Sbjct: 124 IALRPHHAEAHNNLGNLRLAQGDLEQAIASYQRALDLKPDYADAHYNLGNAYQRRGNWTQ 183

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
           + E Y+RA+   P  P A +  +G+   ++G+   A +AF+RA+ L  E  + L  L V
Sbjct: 184 ARESYRRAVASRPEFPEA-QNNLGVVLREMGETSAAIEAFERAIALRAEYADPLNNLGV 241



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 31/225 (13%)

Query: 478 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 537
           N V  L +L+ L  QI +T  A  L R +L    ++V A   L    +++   + +I   
Sbjct: 61  NNVEALHSLSILASQIGETATAERLMRQVLSLQPEHVGALSNLGITLQSQGRQEDAIACY 120

Query: 538 NEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD-ATDGKDSYATLS-----LGN 591
            + + +   +  A + LG+L L   D  +A  +++ A D   D  D++  L       GN
Sbjct: 121 EKVIALRPHHAEAHNNLGNLRLAQGDLEQAIASYQRALDLKPDYADAHYNLGNAYQRRGN 180

Query: 592 WNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 651
           W                     +A+E Y R +        A N  GVVL E G+   + +
Sbjct: 181 WT--------------------QARESYRRAVASRPEFPEAQNNLGVVLREMGETSAAIE 220

Query: 652 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
            F +     + ++  +  D   NL      QG  + A++ Y   +
Sbjct: 221 AFER-----AIALRAEYADPLNNLGVALQEQGRMSAAVEHYHQAI 260


>gi|334118034|ref|ZP_08492124.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333460019|gb|EGK88629.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 772

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 31/295 (10%)

Query: 90  GQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH 147
           G+ L A+G++E A   +K  I L+ D     A LG  C    +  + +++  Y++A+ + 
Sbjct: 48  GKALQAQGKLEDARYWYKVAIALQPDFAEAFANLGTLCATLEQ--WQEAIACYQKAISLQ 105

Query: 148 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP-ENVEALVALAVMDLQAN--EAAG 204
           P+  G  R  +     ++GQ  +A     +AL ++P E  E  + L    L  N  EAA 
Sbjct: 106 PNFAGFYR-NLSRIFTQVGQAEEAADCSYQALMVEPIEIAEEYLDLGNTLLAQNKPEAAL 164

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH------GPT 258
           I        R   + P C  A   LA             QL     A+ N+       P 
Sbjct: 165 I-----CYHRTIYLNPSCCEAYYQLAA---------TASQLQHWDEAIVNYRKAIQLQPD 210

Query: 259 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
            S  YY LA+ +   G   +A   Y  S+ E+N P+ F + YY LG V LKL  ++ A+ 
Sbjct: 211 ISELYYKLAKVFQDSGQLPEAVAAYRESI-ELN-PNSF-WSYYNLGSVLLKLEQWQEAVV 267

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
            +   +EI PD      ++G    +L +  +A    ++A  +DP  + +F +LG+
Sbjct: 268 AYRTAVEINPDFSWCYYSMGEACGKLEKWSEAAAAYQRAIDLDPNYSGSFHNLGD 322



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/299 (20%), Positives = 130/299 (43%), Gaps = 36/299 (12%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  LLA+ + E A   +   +  +     A    A        + +++  Y++A+Q+ P 
Sbjct: 151 GNTLLAQNKPEAALICYHRTIYLNPSCCEAYYQLAATASQLQHWDEAIVNYRKAIQLQPD 210

Query: 150 CPGAIRLGIGLCRYKL-------GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 202
                   I    YKL       GQL +A  A++ +++L+P +  +   L  + L+  + 
Sbjct: 211 --------ISELYYKLAKVFQDSGQLPEAVAAYRESIELNPNSFWSYYNLGSVLLKLEQ- 261

Query: 203 AGIRKGMEKMQRAFEIYP---YCAMALNYLANHFFFTGQHFLVEQLTETALA---VTNHG 256
              ++ +   + A EI P   +C  ++               +E+ +E A A     +  
Sbjct: 262 --WQEAVVAYRTAVEINPDFSWCYYSMGEACGK---------LEKWSEAAAAYQRAIDLD 310

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  S S++NL  ++     + +A   Y    + I    EF + +Y L   ++KL D   A
Sbjct: 311 PNYSGSFHNLGDAFFQLQKWSEAEAAYQ---RAIALHSEFFWSHYNLALTKVKLQDLLGA 367

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           ++ +++ +E+ P+   +   LG   ++  Q + A    ++A +++P  + ++ +LG+ L
Sbjct: 368 ISAYQRAIELNPNFSWSYHNLGEALLKTQQWKAASIAYKRAIELNPNLSWSYYNLGDAL 426



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 117/273 (42%), Gaps = 18/273 (6%)

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           QA V    G+  +++   ++ L  HP+     +  +G      G+L  AR  ++ A+ L 
Sbjct: 13  QAEVYLALGKLDEAIALCQQVLASHPNSAKTCK-TLGKALQAQGKLEDARYWYKVAIALQ 71

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQH 239
           P+  EA   L  +       A + +  E +   Q+A  + P  A     L+  F   GQ 
Sbjct: 72  PDFAEAFANLGTL------CATLEQWQEAIACYQKAISLQPNFAGFYRNLSRIFTQVGQA 125

Query: 240 FLVEQLTETALAVTNHGPTK-SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
                 +  AL V    P + +  Y +L  +  ++   E A + Y  ++       E   
Sbjct: 126 EEAADCSYQALMVE---PIEIAEEYLDLGNTLLAQNKPEAALICYHRTIYLNPSCCE--- 179

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            YY L     +L  +  A+ N+ K +++ PD  E    L  ++   GQ+ +A    R++ 
Sbjct: 180 AYYQLAATASQLQHWDEAIVNYRKAIQLQPDISELYYKLAKVFQDSGQLPEAVAAYRESI 239

Query: 359 KIDPRDAQAFIDLGELLISSDTGA-ALDAFKTA 390
           +++P    ++ +LG +L+  +    A+ A++TA
Sbjct: 240 ELNPNSFWSYYNLGSVLLKLEQWQEAVVAYRTA 272



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 117/252 (46%), Gaps = 18/252 (7%)

Query: 129 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           + G+  +++  Y+ +++++P+   +    +G    KL Q  +A  A++ A++++P+    
Sbjct: 224 DSGQLPEAVAAYRESIELNPNSFWS-YYNLGSVLLKLEQWQEAVVAYRTAVEINPDFSWC 282

Query: 189 LVALAVMDLQANEAAG-IRKGMEK---MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
             ++        EA G + K  E     QRA ++ P  + + + L + FF   +    E 
Sbjct: 283 YYSM-------GEACGKLEKWSEAAAAYQRAIDLDPNYSGSFHNLGDAFFQLQKWSEAEA 335

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
             + A+A+ +       S+YNLA +     D   A   Y  ++ E+N    F + Y+ LG
Sbjct: 336 AYQRAIALHSEF---FWSHYNLALTKVKLQDLLGAISAYQRAI-ELNP--NFSWSYHNLG 389

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
           +  LK   +++A   +++ +E+ P+   +   LG    ++ +   A      A +I+P  
Sbjct: 390 EALLKTQQWKAASIAYKRAIELNPNLSWSYYNLGDALTEMHEWNDAVSAYLCALEIEPEL 449

Query: 365 AQAFIDLGELLI 376
            + +  LG+ LI
Sbjct: 450 PKIYTKLGDALI 461


>gi|324502359|gb|ADY41039.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           [Ascaris suum]
          Length = 1100

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 161/398 (40%), Gaps = 48/398 (12%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ +  E    A + Y  A R+       ++     L+A G++EQA SA+ 
Sbjct: 137 YSNLGNVYKERNQLAE----ALENYRIAVRLKPDFIDGYINLAAALVAGGDLEQAVSAYL 192

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P    A    +G      
Sbjct: 193 SALQYNPDLYCVRSDLGNLLKAM--GRLEEAKVCYLKAIETQPQFAVAWS-NLGCVFNAQ 249

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+QLDP  ++A + L            + K      RA   Y     A
Sbjct: 250 GEIWLAIHHFEKAVQLDPNFLDAYINLG----------NVLKEARIFDRAVAAY---LRA 296

Query: 226 LNYLANHFFFTGQHFLV---EQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEK 278
           LN   NH    G    V   + L + A+ +        P    +Y NLA +   KG  E+
Sbjct: 297 LNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLANALKEKGLVEE 356

Query: 279 AGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           A   Y  ++         + P +      L  ++ + G    A   + K LEIYP+    
Sbjct: 357 AEKAYNTALA--------LCPTHADSQNNLANIKREQGKIEEATRLYLKALEIYPEFAAA 408

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 392
              L  I  Q G+++ A    ++A +I P  A A+ ++G  L    D G AL  +   R 
Sbjct: 409 HSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGALQCY--TRA 466

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           +    G     +  +N+  IH + G    A QS+  AL
Sbjct: 467 IQINPGFA---DAHSNLASIHKDSGNIPEAIQSYSTAL 501



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 101/474 (21%), Positives = 196/474 (41%), Gaps = 35/474 (7%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+   A      +  AD++NV  LL  + + F       S++F   A++ +P+C  A   
Sbjct: 80  GDYANAEQHCNAIWRADQNNVSVLLLLSSIHFQLKNLDKSMQFSSMAIKANPNCAEAYS- 138

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    +  QL +A + ++ A++L P+ ++  + LA   +   +   + + +     A 
Sbjct: 139 NLGNVYKERNQLAEALENYRIAVRLKPDFIDGYINLAAALVAGGD---LEQAVSAYLSAL 195

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 196 QYNPDLYCVRS--DLGNLLKAMGR---LEEAKVCYLKAIETQPQFAVAWSNLGCVFNAQG 250

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L +  ++    
Sbjct: 251 EIWLAIHHFE---KAVQLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLAGNHAVVH 307

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A ++ RKA ++ P    A+ +L   L   + G   +A K   T L
Sbjct: 308 GNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLANAL--KEKGLVEEAEKAYNTAL 365

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
                    +  NN+  I  E+G+ E A + +  AL   I+     + +        AS+
Sbjct: 366 ALCPTHA--DSQNNLANIKREQGKIEEATRLYLKALE--IYPEFAAAHSNL------ASI 415

Query: 455 LQFKDMQLFHRFENDGNH----VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 510
           LQ +      + ++  NH    + +         N+   L+++ D   A   Y   +   
Sbjct: 416 LQQQG-----KLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGALQCYTRAIQIN 470

Query: 511 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
             + DA+  LA+I K   N+  +I+  + ALK+   +P+A   L        DW
Sbjct: 471 PGFADAHSNLASIHKDSGNIPEAIQSYSTALKLKPDFPDAFCNLAHCLQIICDW 524



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 130/332 (39%), Gaps = 48/332 (14%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA ++D +    ++  G +L      ++A 
Sbjct: 235 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAV 290

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           +A+   L    ++       ACV + +G    +++ Y++A+++ P+ P A    +     
Sbjct: 291 AAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFPDA-YCNLANALK 349

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + G + +A +A+  AL L P + ++   LA +     E   I +      +A EIYP  A
Sbjct: 350 EKGLVEEAEKAYNTALALCPTHADSQNNLANIK---REQGKIEEATRLYLKALEIYPEFA 406

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A                                   HS  NLA     +G  + A  +Y
Sbjct: 407 AA-----------------------------------HS--NLASILQQQGKLQDAINHY 429

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++       F   Y  +G    ++GD   AL  + + ++I P   +    L  I+  
Sbjct: 430 KEAIRIAPT---FADAYSNMGNTLKEMGDIGGALQCYTRAIQINPGFADAHSNLASIHKD 486

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            G I +A +    A K+ P    AF +L   L
Sbjct: 487 SGNIPEAIQSYSTALKLKPDFPDAFCNLAHCL 518



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 17/192 (8%)

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
           ++ AL  LA  + QA + A   +    + RA +         N ++     +  HF ++ 
Sbjct: 65  DIAALTELAHREYQAGDYANAEQHCNAIWRADQ---------NNVSVLLLLSSIHFQLKN 115

Query: 245 LTET----ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           L ++    ++A+  + P  + +Y NL   Y  +    +A   Y  +V+   KP +FI  Y
Sbjct: 116 LDKSMQFSSMAIKAN-PNCAEAYSNLGNVYKERNQLAEALENYRIAVRL--KP-DFIDGY 171

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
             L    +  GD   A++ +   L+  PD       LG++   +G++E+A+    KA + 
Sbjct: 172 INLAAALVAGGDLEQAVSAYLSALQYNPDLYCVRSDLGNLLKAMGRLEEAKVCYLKAIET 231

Query: 361 DPRDAQAFIDLG 372
            P+ A A+ +LG
Sbjct: 232 QPQFAVAWSNLG 243



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 25/227 (11%)

Query: 511 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET 570
           Q+ V   L L++I     NL  S++  + A+K N     A S LG++  + +   +A E 
Sbjct: 97  QNNVSVLLLLSSIHFQLKNLDKSMQFSSMAIKANPNCAEAYSNLGNVYKERNQLAEALEN 156

Query: 571 FRAASD-ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSN 629
           +R A     D  D Y  L+       AAL        +    LE+A   Y   + Q+  +
Sbjct: 157 YRIAVRLKPDFIDGYINLA-------AAL--------VAGGDLEQAVSAYLSAL-QYNPD 200

Query: 630 LYAA-NGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 688
           LY   +  G +L   G+ + +K  + +  E        Q    W NL  V+ AQG   LA
Sbjct: 201 LYCVRSDLGNLLKAMGRLEEAKVCYLKAIETQP-----QFAVAWSNLGCVFNAQGEIWLA 255

Query: 689 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 735
           +  ++  ++      DA I   L     EA  +     + LRA++LA
Sbjct: 256 IHHFEKAVQLDPNFLDAYI--NLGNVLKEARIFDRAVAAYLRALNLA 300


>gi|328954592|ref|YP_004371926.1| hypothetical protein Desac_2946 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454916|gb|AEB10745.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 668

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 35/306 (11%)

Query: 76  SRIDMHEPS---TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           SRI  + P    ++  +G +    G+ E A + F  VL  D     A   +      RGR
Sbjct: 111 SRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRLDPVRPAAYYNRGMAHSRRGR 170

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ--RALQLDPENVEALV 190
           Y  ++  Y RAL+++P       L  G+   KLG+   A++ FQ  R LQ+ P  +E+ V
Sbjct: 171 YDQAIADYNRALELNPGDAQVYHLR-GIAYSKLGRSDLAKEDFQKARGLQI-PVTLES-V 227

Query: 191 ALAVMDLQANEAAGIRKGMEKMQ---------RAFE-IYPYCAMALNYLANHFFFTGQHF 240
             A+ D +A  +  +R+     Q         R+ + IY       N   +HFF      
Sbjct: 228 PPALTD-EARPSREVRESAPPEQFITVRSSLDRSIKPIY-------NQGVDHFFNKQYDL 279

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFP 299
            V + ++    V N  P    +Y+N    Y  KG  E A   + A ++ + N+   ++  
Sbjct: 280 AVSEFSQ----VINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYV-- 333

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
               G  Q++ G    AL +F + L+  P + +  +A G++Y  L + ++A+E  +KA +
Sbjct: 334 --NRGMAQVRRGRLEKALADFNRALQFNPSDAQIYRARGNVYDMLHKTQQAREDFQKAKE 391

Query: 360 IDPRDA 365
           +  R A
Sbjct: 392 LSGRVA 397



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 149/375 (39%), Gaps = 68/375 (18%)

Query: 78  IDMHE--PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 135
           I+ H   P  +  +G +   KG+ E A + F  VL  D +   A + +   +  RGR   
Sbjct: 288 INAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYVNRGMAQVRRGRLEK 347

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD------------- 182
           +L  + RALQ +PS    I    G     L +  +AR+ FQ+A +L              
Sbjct: 348 ALADFNRALQFNPSD-AQIYRARGNVYDMLHKTQQAREDFQKAKELSGRVAYSPPSAQDT 406

Query: 183 ----PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
               P +   +VA +   +   E+A  +   +K+Q A +I P  A A       ++  G 
Sbjct: 407 AIPVPPSTRPVVAPSAGPVAPPESAADQAAWDKIQNALKINPKNADA-------YYQRGG 459

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
             L     + A+A             + +RS   +  + KA                   
Sbjct: 460 LQLKRGKIDDAIA-------------DFSRSLELRPKFVKA------------------- 487

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            Y   G    K G F  AL +  + L++ PD+ E+L   G IY +    ++A   L +A 
Sbjct: 488 -YVDRGTAWAKKGQFDQALVDLNRALDLDPDSVESLNNRGGIYARQSMYDRALSDLNRAL 546

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEK 416
            ++P  A+A+ +  ++     TG      + A   L+KA    P   +   N G+I+ ++
Sbjct: 547 DLNPNYAKAYYNRAQVYYF--TG----HLQQAVADLEKAVSLDPKDADAYYNRGLIYDKR 600

Query: 417 GEFESAHQSFKDALG 431
            +++ A   F  AL 
Sbjct: 601 KQYDLAIADFNQALA 615


>gi|440753492|ref|ZP_20932695.1| trypsin family protein [Microcystis aeruginosa TAIHU98]
 gi|440177985|gb|ELP57258.1| trypsin family protein [Microcystis aeruginosa TAIHU98]
          Length = 569

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 138/302 (45%), Gaps = 31/302 (10%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   
Sbjct: 41  YLWQGDRLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDRGFI 100

Query: 146 VHPSCPG-------AIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDL 197
           V+   P         + LG    R +  +  +A  A+Q+A+ + P    +  +  A+  L
Sbjct: 101 VNHKPPMEPSQSNYLVALGDIFAREE--KWSEAIDAYQKAMIIKPTFKAQFQLGKALYSL 158

Query: 198 Q-ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           Q  +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A       
Sbjct: 159 QRWDEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQA 205

Query: 257 ----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
               P +  +Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G 
Sbjct: 206 LELIPNQGETYKKLGETLAKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGK 262

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
              A+  F++  +I P N    + L +IY+  GQI++     R+A +IDP  ++A   L 
Sbjct: 263 LGEAMAVFQQARQISPKNANIYENLCYIYINSGQIDEGLNWCRQAVEIDPNLSEARFILQ 322

Query: 373 EL 374
           E+
Sbjct: 323 EI 324


>gi|196232945|ref|ZP_03131794.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196222923|gb|EDY17444.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 808

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 165/401 (41%), Gaps = 81/401 (20%)

Query: 41  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 100
           L+ LGV    +G+ E  +        +A    N A+  D+         G  L ++  +E
Sbjct: 49  LHLLGVIALQMGQHEAAENLLRRSIAMAPD--NPAAHYDL---------GNALRSRKRLE 97

Query: 101 QASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
            A +A++  +E   D V AL  LG AC E   GR  +++  ++ AL++ P         +
Sbjct: 98  DAIAAYRRAIELRPDYVEALHNLGVACKE--SGRLDEAIAAFQGALRLQPQ--------L 147

Query: 159 GLCRYKLG-------QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
            +  Y LG       + G+A  A+++A+ L P+ V+A   L V      EA    + +  
Sbjct: 148 MVAHYNLGNALRERKRYGEAIAAYRQAIALGPDYVDAHNNLGVA---CKEAGRFEEAVAA 204

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
            QRA E+ P  A A N                                     NL  ++ 
Sbjct: 205 YQRAIELQPDHAAAHN-------------------------------------NLGAAWR 227

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
            +G  ++A    +A  + I    +F   Y  LG    + G    A+  F + +E+ PD  
Sbjct: 228 ERGALDEA---IVAQRRAIELRPDFAEAYNNLGVACKERGRTDEAVAAFRRSIELQPDFA 284

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 391
           ET   LG+   + G+ ++A    R+A  + P  A A  +L   L S      +     A 
Sbjct: 285 ETHNNLGNTLQECGRADEAIAAYRRALALQPEYAAAANNLASTLRS------VGLLDEAT 338

Query: 392 TLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 430
             +++A E  P   ++ NN+G I  ++G+ E A  ++++AL
Sbjct: 339 AAIRRALELQPALSDIRNNLGNILKDQGDVEGAIGAYREAL 379



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 8/113 (7%)

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
           + ++L + PD+ + L  LG I +Q+GQ E A+ LLR++  + P +  A  DLG  L S  
Sbjct: 35  YRQILAVQPDHAQALHLLGVIALQMGQHEAAENLLRRSIAMAPDNPAAHYDLGNALRSRK 94

Query: 380 TGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                   + A    ++A E  P  +E L+N+GV   E G  + A  +F+ AL
Sbjct: 95  R------LEDAIAAYRRAIELRPDYVEALHNLGVACKESGRLDEAIAAFQGAL 141



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/342 (20%), Positives = 135/342 (39%), Gaps = 64/342 (18%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G + +A   ++ +L    D+  AL     +    G++  +    +R++ + P  P A   
Sbjct: 26  GRLAEAEGLYRQILAVQPDHAQALHLLGVIALQMGQHEAAENLLRRSIAMAPDNPAA--- 82

Query: 157 GIGLCRYKLGQLGKARQ-------AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
                 Y LG   ++R+       A++RA++L P+ VEAL  L V      E+  + + +
Sbjct: 83  -----HYDLGNALRSRKRLEDAIAAYRRAIELRPDYVEALHNLGVA---CKESGRLDEAI 134

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
              Q A  + P   +A                                     +YNL  +
Sbjct: 135 AAFQGALRLQPQLMVA-------------------------------------HYNLGNA 157

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
              +  Y +A   Y    + I    +++  +  LG    + G F  A+  +++ +E+ PD
Sbjct: 158 LRERKRYGEAIAAYR---QAIALGPDYVDAHNNLGVACKEAGRFEEAVAAYQRAIELQPD 214

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFK 388
           +      LG  + + G +++A    R+A ++ P  A+A+ +LG        T  A+ AF+
Sbjct: 215 HAAAHNNLGAAWRERGALDEAIVAQRRAIELRPDFAEAYNNLGVACKERGRTDEAVAAFR 274

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +  L          E  NN+G    E G  + A  +++ AL
Sbjct: 275 RSIELQPDFA-----ETHNNLGNTLQECGRADEAIAAYRRAL 311


>gi|432851225|ref|XP_004066917.1| PREDICTED: Bardet-Biedl syndrome 4 protein-like [Oryzias latipes]
          Length = 517

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           I++ +E +Q    + P     L  +A   F  G+H    ++   A  + +     SH   
Sbjct: 81  IQESLELLQSCAILNPSSTDNLKQVARSLFLLGKHKAAIEVYHEAARLCDKDWEISH--- 137

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           NL   +    D++ A   ++ +  +INK H+  F    LG+V L  G+   A+  F++ +
Sbjct: 138 NLGVCFFFIKDFKNAE-EHLNTALQINK-HDKTF--MMLGKVHLVAGETDKAIEVFKRAV 193

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAA 383
           E  P+N E L  LG +Y+QL + +KA E L  A   DP + +A +  G ++    D   A
Sbjct: 194 EFSPENTEHLSTLGLLYLQLRKYQKAFEHLGNALTFDPNNYKAILAAGSMMQTHGDFDVA 253

Query: 384 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           ++ ++ A      A  E P  + NNIG+  F K ++ +A    K A
Sbjct: 254 MNKYRVAAC----AVPESP-PLWNNIGMCFFGKKKYVAAISCLKRA 294



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 122/295 (41%), Gaps = 41/295 (13%)

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 593
           E +N AL++N K+     MLG + L   +  KA E F RA   + +  +  +TL L    
Sbjct: 154 EHLNTALQIN-KHDKTFMMLGKVHLVAGETDKAIEVFKRAVEFSPENTEHLSTLGL---- 208

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
            +  LR             +KA E     +    +N  A   AG ++   G FDV+ + +
Sbjct: 209 LYLQLRK-----------YQKAFEHLGNALTFDPNNYKAILAAGSMMQTHGDFDVAMNKY 257

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT--DAQILLYL 711
                A   S     P +W N+   +F +  +  A+    +CL++  Y +  D ++L  L
Sbjct: 258 RVAACAVPES-----PPLWNNIGMCFFGKKKYVAAI----SCLKRANYLSPFDWKVLYNL 308

Query: 712 ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEV---- 767
              H   +Q+      L  AI L P    L     VA+       ++ + R  ++     
Sbjct: 309 GLVHLTMQQYASAFHFLSAAISLNPRMGELYMLLAVALTNL--EDVENSTRAYEQAVNLD 366

Query: 768 -RSTVAELENAVRVFSHLSAASNLHLHGFDEKKIN------THVEYCKHLLDAAK 815
             + +  L  A+ +++H    + L  +   ++K+N      +++E+   L+D A+
Sbjct: 367 ESNPLVNLNFAIFLYNHGDKTAALDQYQEMQRKVNILQDSSSNLEFDPELMDMAQ 421



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 90/245 (36%), Gaps = 52/245 (21%)

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G+  KA + F+RA++  PEN E L  L ++ LQ          + K Q+AFE        
Sbjct: 180 GETDKAIEVFKRAVEFSPENTEHLSTLGLLYLQ----------LRKYQKAFE-------- 221

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHG----------------PTKSHSYYNLARS 269
             +L N   F   ++  + +      +  HG                P     + N+   
Sbjct: 222 --HLGNALTFDPNNY--KAILAAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMC 277

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPY-----YGLGQVQLKLGDFRSALTNFEKVL 324
           +  K  Y  A    ++ +K  N    ++ P+     Y LG V L +  + SA       +
Sbjct: 278 FFGKKKYVAA----ISCLKRAN----YLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAAI 329

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAA 383
            + P   E    L      L  +E +     +A  +D  +    ++    L +  D  AA
Sbjct: 330 SLNPRMGELYMLLAVALTNLEDVENSTRAYEQAVNLDESNPLVNLNFAIFLYNHGDKTAA 389

Query: 384 LDAFK 388
           LD ++
Sbjct: 390 LDQYQ 394


>gi|383319448|ref|YP_005380289.1| TPR repeats containing protein [Methanocella conradii HZ254]
 gi|379320818|gb|AFC99770.1| TPR repeats containing protein [Methanocella conradii HZ254]
          Length = 1006

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 16/339 (4%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           L  KG +++A   F+  +    +   A          +G   +++  Y  A+++ P  P 
Sbjct: 625 LYDKGMLDEAVKEFREAIRIKPEYAEAHYNLGVALDRKGLIDEAIGEYLIAIEMKPEEPN 684

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A    +G+  YK G L  A + F+  + L P++  A   L    L  NE   +   + ++
Sbjct: 685 A-HYSLGMALYKKGLLDDAIKEFKEVIWLKPDDFSARFQLG---LAFNEKNMLDDAIREL 740

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
           + A  + P    A++Y  N     G+  L++       A     P   +++Y L  +Y+ 
Sbjct: 741 REAASMEP-GDPAIHY--NLGLVLGRKGLLDDAIGEFKAALKLKPDDVNAHYYLGLAYNY 797

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           KG Y+ A      +++   KP +    +Y LG V   +G F  A+  + + L I PD  +
Sbjct: 798 KGMYDDAATELGEALRL--KPDD-ANTHYNLGVVMANMGRFDDAIREYREALRIKPDYAK 854

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD-AFKTAR 391
               LG +    GQ+++A     +A ++ P DA A  +LG   ++ D    LD A +  +
Sbjct: 855 AHNNLGIVLDYKGQVDEAIAEYLEAVRLKPDDANAHYNLG---LAYDNKGMLDEAIRELK 911

Query: 392 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             L+   ++       N+GVI  +KG  + A   +  A+
Sbjct: 912 EALRLKPDDANAHY--NLGVILGKKGLLKEAIDEYNIAV 948



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 156/370 (42%), Gaps = 18/370 (4%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  L  KG ++QA   F+       D   A    A V   +G   D++  Y+ A+++ P 
Sbjct: 486 GLALSKKGSLDQAIREFREAYRLKPDFAEAFYNLAVVFGKKGLLDDAIREYREAIRLRPD 545

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
              A    + +   K   +  A + F+ A+ L P++  A   L    L  N+   +   +
Sbjct: 546 YAEA-HYNLAIAYSKKNMVDDAIKEFREAVHLRPDDANAHYNLG---LALNKKGLLDNAI 601

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
            +      + P  A A N LA   +  G   L E + E   A+    P  + ++YNL  +
Sbjct: 602 REYVEVVRLRPDDAKAHNNLALALYDKG--MLDEAVKEFREAIRIK-PEYAEAHYNLGVA 658

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
              KG  ++A   Y+ +++   KP E    +Y LG    K G    A+  F++V+ + PD
Sbjct: 659 LDRKGLIDEAIGEYLIAIE--MKPEE-PNAHYSLGMALYKKGLLDDAIKEFKEVIWLKPD 715

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
           +      LG  + +   ++ A   LR+AA ++P D     +LG  L+    G   DA   
Sbjct: 716 DFSARFQLGLAFNEKNMLDDAIRELREAASMEPGDPAIHYNLG--LVLGRKGLLDDAIGE 773

Query: 390 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 449
            +  LK   ++V       +G+ +  KG ++ A       LG+ + L   D+ T   +  
Sbjct: 774 FKAALKLKPDDVNAHYY--LGLAYNYKGMYDDAATE----LGEALRLKPDDANTHYNLGV 827

Query: 450 ASASMLQFKD 459
             A+M +F D
Sbjct: 828 VMANMGRFDD 837



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 137/307 (44%), Gaps = 18/307 (5%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
           +G+  D+++ YK AL++ P    A R  +G+   + G L    + F+  + L P++ EA 
Sbjct: 424 KGQIDDAIKEYKEALRIRPDYVKA-RNNLGVALDEKGFLDDTIREFREVVWLKPDDAEAH 482

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
             L    L  ++   + + + + + A+ + P  A A   LA  F   G+  L++      
Sbjct: 483 YNLG---LALSKKGSLDQAIREFREAYRLKPDFAEAFYNLAVVF---GKKGLLDDAIREY 536

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
                  P  + ++YNLA +Y  K   + A   +  +V    +P +    +Y LG    K
Sbjct: 537 REAIRLRPDYAEAHYNLAIAYSKKNMVDDAIKEFREAVHL--RPDD-ANAHYNLGLALNK 593

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
            G   +A+  + +V+ + PD+ +    L       G +++A +  R+A +I P  A+A  
Sbjct: 594 KGLLDNAIREYVEVVRLRPDDAKAHNNLALALYDKGMLDEAVKEFREAIRIKPEYAEAHY 653

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           +LG   ++ D    +D       +  +   E P     ++G+  ++KG  + A + FK+ 
Sbjct: 654 NLG---VALDRKGLIDEAIGEYLIAIEMKPEEP-NAHYSLGMALYKKGLLDDAIKEFKEV 709

Query: 430 LGDGIWL 436
               IWL
Sbjct: 710 ----IWL 712



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 124/326 (38%), Gaps = 50/326 (15%)

Query: 82  EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN-RGRYSDSLEFY 140
           EP+     G  L  KG ++ A   FK V+    D+  A   Q  + FN +    D++   
Sbjct: 682 EPNAHYSLGMALYKKGLLDDAIKEFKEVIWLKPDDFSARF-QLGLAFNEKNMLDDAIREL 740

Query: 141 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV---------- 190
           + A  + P  P AI   +GL   + G L  A   F+ AL+L P++V A            
Sbjct: 741 REAASMEPGDP-AIHYNLGLVLGRKGLLDDAIGEFKAALKLKPDDVNAHYYLGLAYNYKG 799

Query: 191 -----------ALAVMDLQANEAAGIRKGMEKMQR----------AFEIYPYCAMALNYL 229
                      AL +    AN    +   M  M R          A  I P  A A N L
Sbjct: 800 MYDDAATELGEALRLKPDDANTHYNLGVVMANMGRFDDAIREYREALRIKPDYAKAHNNL 859

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
                + GQ   V++     L      P  ++++YNL  +Y +KG  ++A       ++E
Sbjct: 860 GIVLDYKGQ---VDEAIAEYLEAVRLKPDDANAHYNLGLAYDNKGMLDEA-------IRE 909

Query: 290 IN-----KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
           +      KP +    +Y LG +  K G  + A+  +   + + PD  E    LG      
Sbjct: 910 LKEALRLKPDD-ANAHYNLGVILGKKGLLKEAIDEYNIAVSLRPDYAEAYYNLGFALDMA 968

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFID 370
               KA E  RK     P    +++D
Sbjct: 969 QMGAKAVEAYRKFIDCAPPQYASYVD 994



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 87/394 (22%), Positives = 159/394 (40%), Gaps = 44/394 (11%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y ++ R++          G  L  + ++++A   FK  L    DN         V 
Sbjct: 124 AIKEYRESLRLNPDYARAHYSLGIALGKRDQLDEAIHEFKEALRLQPDNPEVHYNMGVVL 183

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
             +G   D+++ ++ A+ + P    A   LG+ L  YK G + +A   F+  + L P++ 
Sbjct: 184 ARKGLIDDAIKAFRDAIALKPDDAEAHYNLGVSL-DYK-GLIDEAISEFRETVWLKPDDA 241

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
           EA   L    L  ++     + + + + A  + P  A A N L     + G   +V++  
Sbjct: 242 EAHYNLG---LALSKKGMFDQAIREYREAVRLKPDYAKAHNNLGIVLDYKG---MVDEAI 295

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHE---------- 295
           +   A  N  P  + ++YNL  +  SK + ++A   +  +VK + N P            
Sbjct: 296 KEYRAAVNLKPDDAEAHYNLGVALTSKNELDEAIHEFKEAVKLKPNYPEAHFKLGYALCR 355

Query: 296 --------------------FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
                               F   +Y LG V  K      A+   +  + + PD  E   
Sbjct: 356 KGLLDDAIRELREAIWLRPGFAEAHYNLGVVFGKKNMMDDAIRELKDAIRLRPDYAEAHY 415

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
            LG  Y   GQI+ A +  ++A +I P   +A  +LG  L   + G   D  +  R ++ 
Sbjct: 416 NLGLAYDYKGQIDDAIKEYKEALRIRPDYVKARNNLGVAL--DEKGFLDDTIREFREVVW 473

Query: 396 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
              ++   E   N+G+   +KG  + A + F++A
Sbjct: 474 LKPDDA--EAHYNLGLALSKKGSLDQAIREFREA 505



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 119/540 (22%), Positives = 209/540 (38%), Gaps = 93/540 (17%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  S ++YNL  +   KG  + A   Y  S++ +N   ++   +Y LG    K      A
Sbjct: 102 PDFSEAHYNLGVALDDKGLLDDAIKEYRESLR-LNP--DYARAHYSLGIALGKRDQLDEA 158

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           +  F++ L + PDN E    +G +  + G I+ A +  R A  + P DA+A  +LG   +
Sbjct: 159 IHEFKEALRLQPDNPEVHYNMGVVLARKGLIDDAIKAFRDAIALKPDDAEAHYNLG---V 215

Query: 377 SSDTGAALD-AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL----- 430
           S D    +D A    R  +    ++   E   N+G+   +KG F+ A + +++A+     
Sbjct: 216 SLDYKGLIDEAISEFRETVWLKPDDA--EAHYNLGLALSKKGMFDQAIREYREAVRLKPD 273

Query: 431 ------GDGIWLT---LLDSKTKTYVIDASASMLQFKDMQL-----------------FH 464
                   GI L    ++D   K Y    +A  L+  D +                   H
Sbjct: 274 YAKAHNNLGIVLDYKGMVDEAIKEY---RAAVNLKPDDAEAHYNLGVALTSKNELDEAIH 330

Query: 465 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
            F+     V+L  N     F L   L +      A    R  ++    + +A+  L  + 
Sbjct: 331 EFKE---AVKLKPNYPEAHFKLGYALCRKGLLDDAIRELREAIWLRPGFAEAHYNLGVVF 387

Query: 525 KARNNLQLSIELVNEALKVNGKYPNALSMLG---DLELKNDDWVKA-KETFRAASDATDG 580
             +N +  +I  + +A+++   Y  A   LG   D + + DD +K  KE  R   D    
Sbjct: 388 GKKNMMDDAIRELKDAIRLRPDYAEAHYNLGLAYDYKGQIDDAIKEYKEALRIRPD---- 443

Query: 581 KDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVL 640
                         +   RN       E   L+     +  V+     +  A    G+ L
Sbjct: 444 --------------YVKARNNLGVALDEKGFLDDTIREFREVVWLKPDDAEAHYNLGLAL 489

Query: 641 AEKGQFDVSKDLFTQVQEAASGSVFVQMPD---VWINLAHVYFAQGNFALAMKMYQNCLR 697
           ++KG  D +     + +EA     +   PD    + NLA V+  +G    A++ Y+  +R
Sbjct: 490 SKKGSLDQA---IREFREA-----YRLKPDFAEAFYNLAVVFGKKGLLDDAIREYREAIR 541

Query: 698 ------KFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQK 751
                 + +YN        LA  + +     D  K    A+HL P +    ++ G+A+ K
Sbjct: 542 LRPDYAEAHYN--------LAIAYSKKNMVDDAIKEFREAVHLRPDDANAHYNLGLALNK 593



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 143/350 (40%), Gaps = 58/350 (16%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  L  KG ++ A   F+  +  + D   A         ++G   D+++ Y+ +L+++P 
Sbjct: 78  GVALDDKGLLDDAIREFREAVRLNPDFSEAHYNLGVALDDKGLLDDAIKEYRESLRLNPD 137

Query: 150 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
              A   LGI L   K  QL +A   F+ AL+L P+N E    + V+          RKG
Sbjct: 138 YARAHYSLGIALG--KRDQLDEAIHEFKEALRLQPDNPEVHYNMGVV--------LARKG 187

Query: 209 M-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
           + +   +AF      A+AL                              P  + ++YNL 
Sbjct: 188 LIDDAIKAFR----DAIALK-----------------------------PDDAEAHYNLG 214

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
            S   KG  ++A   +  +V    KP +    +Y LG    K G F  A+  + + + + 
Sbjct: 215 VSLDYKGLIDEAISEFRETV--WLKPDD-AEAHYNLGLALSKKGMFDQAIREYREAVRLK 271

Query: 328 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDA 386
           PD  +    LG +    G +++A +  R A  + P DA+A  +LG  L S ++   A+  
Sbjct: 272 PDYAKAHNNLGIVLDYKGMVDEAIKEYRAAVNLKPDDAEAHYNLGVALTSKNELDEAIHE 331

Query: 387 FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 436
           FK A  L        P E    +G     KG  + A +  ++A    IWL
Sbjct: 332 FKEAVKL----KPNYP-EAHFKLGYALCRKGLLDDAIRELREA----IWL 372


>gi|118375025|ref|XP_001020699.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89302466|gb|EAS00454.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 318

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 12/214 (5%)

Query: 221 YCAMALNYLANHFFFTGQH--FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
           +C   LN L    F+   H   ++E+ ++  L      P     Y  L R Y S  + E+
Sbjct: 14  FCKFNLNVLKLIVFWGIYHQQNMLEEASQFYLKALQIEPKNHEIYGQLGRVYESLNNLEQ 73

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A   Y+ ++  +NK    ++ Y  L  V  K+   + A  ++ K LEI+P+       LG
Sbjct: 74  ARQCYLNAIN-LNKFGPSVY-YNDLATVYFKMNMLKEAKASYLKALEIFPEQPYCYNGLG 131

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 398
            +Y QL  +++++E  +KA +I P    A+I+LG L    +          A+   +KA 
Sbjct: 132 LVYQQLSMLKQSKECFQKALEIYPNYVSAYINLGNLFYQQNL------LTEAKQQFEKAL 185

Query: 399 EEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 430
           +  P++   L N+G I+ +    E A Q F  AL
Sbjct: 186 QLDPLDYKCLYNLGNIYIDMQMLEDAKQYFLKAL 219



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 22/245 (8%)

Query: 131 GRYSDSL-------EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           GR  +SL       + Y  A+ ++   P      +    +K+  L +A+ ++ +AL++ P
Sbjct: 62  GRVYESLNNLEQARQCYLNAINLNKFGPSVYYNDLATVYFKMNMLKEAKASYLKALEIFP 121

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLV 242
           E       L ++     + + +++  E  Q+A EIYP Y +  +N L N F+   Q+ L 
Sbjct: 122 EQPYCYNGLGLV---YQQLSMLKQSKECFQKALEIYPNYVSAYIN-LGNLFY--QQNLLT 175

Query: 243 E--QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
           E  Q  E AL +    P      YNL   Y      E A  Y++ ++ EIN   +++  +
Sbjct: 176 EAKQQFEKALQL---DPLDYKCLYNLGNIYIDMQMLEDAKQYFLKAL-EINP--QYVNGH 229

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
             LG V + +  F+ A   F K LEI P + ++   L  +Y     +E+AQ+   KA +I
Sbjct: 230 NNLGLVYIDMKMFQQAKQCFLKALEIDPTSYKSYAYLAELYAHQEMLEEAQQCFLKALQI 289

Query: 361 DPRDA 365
           +P+ +
Sbjct: 290 NPQSS 294



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 57/269 (21%)

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA-LAVMD 196
           +FY +ALQ+ P     I   +G     L  L +ARQ +  A+ L+          LA + 
Sbjct: 42  QFYLKALQIEPK-NHEIYGQLGRVYESLNNLEQARQCYLNAINLNKFGPSVYYNDLATVY 100

Query: 197 LQANEAAGIRKGMEKMQRAFEIYP---YCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
            + N    +++      +A EI+P   YC            + G   + +QL+       
Sbjct: 101 FKMN---MLKEAKASYLKALEIFPEQPYC------------YNGLGLVYQQLSMLK---- 141

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
                             SK  ++KA   Y         P+ ++  Y  LG +  +    
Sbjct: 142 -----------------QSKECFQKALEIY---------PN-YVSAYINLGNLFYQQNLL 174

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
             A   FEK L++ P + + L  LG+IY+ +  +E A++   KA +I+P+      +LG 
Sbjct: 175 TEAKQQFEKALQLDPLDYKCLYNLGNIYIDMQMLEDAKQYFLKALEINPQYVNGHNNLGL 234

Query: 374 LLISSDTGAALDAFKTARTLLKKAGEEVP 402
           + I       +  F+ A+    KA E  P
Sbjct: 235 VYID------MKMFQQAKQCFLKALEIDP 257


>gi|118364085|ref|XP_001015265.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89297032|gb|EAR95020.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1052

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 130/590 (22%), Positives = 243/590 (41%), Gaps = 79/590 (13%)

Query: 121 LGQAC-VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           +GQ C V  N   +  ++E +K+ L++ P+   ++     +C +   +  +A +  Q+AL
Sbjct: 209 MGQICQVYENVKSFDQAIECFKKILEIKPNSTKSLMSIAKIC-FTQQKFDEAIENIQKAL 267

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           Q++P+N E L  L  +             +    ++ E+ P      NY    F     +
Sbjct: 268 QIEPKNAETLERLGYI---YQHLKKYDDALFWYNKSLEVKP------NYYFPLFNKGIIY 318

Query: 240 FLVEQLTETAL---AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
           F  ++L E  L    V    P   +++YNL   Y  K    +A      +V ++N  H+ 
Sbjct: 319 FAQKKLDEAILELQKVIKIKPDYIYAHYNLGLIYEQKQMMNEAINCQKKAV-DLNPKHKD 377

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
                 +   QLK+  F  A+  ++KV+++ P+N +    LG ++ Q  ++++A     K
Sbjct: 378 SLIRLAVIHTQLKM--FDQAIEYYQKVIQLNPNNTDVQNNLGILFEQSNKLDEAINCYMK 435

Query: 357 AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHF 414
             KI+P D++ + +LG   I  +   ++D    A    KKA E  P  ++   ++G  + 
Sbjct: 436 NIKINPNDSKTYFNLG---IVYEKKKSID---EAMVCFKKALEINPSFLQAQISLGNAYS 489

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM-LQFKDMQLFHR-FENDGNH 472
            K   + A   FK ++        LD  +     +A  S+ L + D Q+  + FE     
Sbjct: 490 SKKMVDEAILCFKKSIQ-------LDPNS----FNAYNSLGLIYYDTQMMDQAFECFQKA 538

Query: 473 VELPWNKVTVLFNLARLLE----------------QIHDTVAASVLYRLILFKYQDYVDA 516
           +++  N     FNL  + E                Q +   A ++L    L+      D 
Sbjct: 539 LDINPNYFFAHFNLGLVYENRNQQEEALKHYQQAIQSNPNQANALLKASDLYIQNKNFDK 598

Query: 517 YLR--LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            L+  L  I K ++   LS++   +A+K++  Y  A   LG ++ +N  + ++   F+  
Sbjct: 599 ALQCYLYYIQKIKDKAILSLK---QAVKLDPNYYQAYEQLGLIQQENKMFEESILYFKKV 655

Query: 575 SDAT----DGKDS----YATLSLGNWNYFAALRNEKRAPKLEATH------------LEK 614
            +      +  DS    Y  + + N       +     PKLE TH            L++
Sbjct: 656 IEINPMFLNAYDSLACVYQEMKMSNEALIYYQKALDINPKLENTHFKLGILYQEKKMLDE 715

Query: 615 AKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSV 664
           A   Y + I  +  N  A N  G++  +K   D + D +T+  E     V
Sbjct: 716 AILCYQKAIEINPKNANAYNNLGIIFEQKNMIDQAFDCYTKALEIDQSYV 765



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 127/310 (40%), Gaps = 62/310 (20%)

Query: 72   YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
            Y KA  ID          G L     ++++A   FK+ +E D +   +   Q  V   +G
Sbjct: 754  YTKALEIDQSYVKAHNNIGLLYYDLKQMDKAHQCFKLSIELDPNYEDSHYNQGLVYEFQG 813

Query: 132  RYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYK-LGQLGKARQAFQRALQLDPENVEAL 189
              ++++E YKRA+Q++P    A  RL    C Y  L  + +A   + + ++L+PEN++A+
Sbjct: 814  HITEAMESYKRAIQINPKYTKAYSRLA---CIYSDLEMMIEAISCYLQLIELEPENIDAM 870

Query: 190  VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
              + ++  Q N+       ++  QRA  I                               
Sbjct: 871  NYVGIIYSQRNQP---NTAIQLFQRALLI------------------------------- 896

Query: 250  LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM-------ASVKEINKPHEFIFPYYG 302
                   P   +S YNL  +Y  K   ++A  YY         +VK INK          
Sbjct: 897  ------NPEHINSLYNLGNTYEDKEQLDEAISYYQRIIQIDPQNVKAINK---------- 940

Query: 303  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            +G + +K    + ALT ++K L I  +  +T   +   Y    ++ K+ +  +KA +IDP
Sbjct: 941  IGNIYIKKQMDQEALTQYKKALSIDKNFVQTYYNIAAYYEIQQKLNKSIQFYKKAVEIDP 1000

Query: 363  RDAQAFIDLG 372
                 + +LG
Sbjct: 1001 EYIGIYFNLG 1010



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 155/373 (41%), Gaps = 25/373 (6%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A  YY KA  I+    +T    G L   K  +++A   ++  +E +  N  A      + 
Sbjct: 682  ALIYYQKALDINPKLENTHFKLGILYQEKKMLDEAILCYQKAIEINPKNANAYNNLGIIF 741

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              +     + + Y +AL++  S   A    IGL  Y L Q+ KA Q F+ +++LDP   +
Sbjct: 742  EQKNMIDQAFDCYTKALEIDQSYVKA-HNNIGLLYYDLKQMDKAHQCFKLSIELDPNYED 800

Query: 188  ALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            +      V + Q +    I + ME  +RA +I P    A + LA    ++    ++E ++
Sbjct: 801  SHYNQGLVYEFQGH----ITEAMESYKRAIQINPKYTKAYSRLA--CIYSDLEMMIEAIS 854

Query: 247  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
               L +    P    +  N     +S+ +     +        IN  H  I   Y LG  
Sbjct: 855  -CYLQLIELEPENIDAM-NYVGIIYSQRNQPNTAIQLFQRALLINPEH--INSLYNLGNT 910

Query: 307  QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
                     A++ ++++++I P N + +  +G+IY++    ++A    +KA  ID    Q
Sbjct: 911  YEDKEQLDEAISYYQRIIQIDPQNVKAINKIGNIYIKKQMDQEALTQYKKALSIDKNFVQ 970

Query: 367  AFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAH 423
             + ++     I      ++  +       KKA E  P  I +  N+G ++ E+   + A 
Sbjct: 971  TYYNIAAYYEIQQKLNKSIQFY-------KKAVEIDPEYIGIYFNLGAVYDERNVLDKAL 1023

Query: 424  QSFKDAL---GDG 433
              +K      GDG
Sbjct: 1024 SYYKKIFKLDGDG 1036



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 87/435 (20%), Positives = 156/435 (35%), Gaps = 75/435 (17%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q Y KA  I+ +        GQ+   K    QA  ++ + L+ D++         C+ 
Sbjct: 28  AVQCYLKAIEINPNMFEAHKRLGQVYELKKIPNQALISYNLALKIDQNEKQIHYRIGCIY 87

Query: 128 FNRGRYSDSLEFYKRALQVHPSCP------GAIR-------------------------- 155
            ++     +L  +KRA+++ P+          I+                          
Sbjct: 88  LSQSIVGQALICFKRAIEIDPNYSEVYESLATIKDAENSKDVIKYFKQIIEVNPNNYYPY 147

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-----VALAVMDLQANEAAGIRK--- 207
             +      L  + ++ Q   + L ++P NV+A      V L V+ L        +K   
Sbjct: 148 YSLAYLYLNLNMIDESLQCLNKVLDINPNNVDAYERLSQVYLKVLKLAIQIDPNYKKAYL 207

Query: 208 -----------------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
                             +E  ++  EI P    +L  +A    FT Q F  ++  E   
Sbjct: 208 SMGQICQVYENVKSFDQAIECFKKILEIKPNSTKSLMSIA-KICFTQQKF--DEAIENIQ 264

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
                 P  + +   L   Y     Y+ A  +Y  S++   KP+ + FP +  G +    
Sbjct: 265 KALQIEPKNAETLERLGYIYQHLKKYDDALFWYNKSLEV--KPN-YYFPLFNKGIIYFAQ 321

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
                A+   +KV++I PD       LG IY Q   + +A    +KA  ++P+   + I 
Sbjct: 322 KKLDEAILELQKVIKIKPDYIYAHYNLGLIYEQKQMMNEAINCQKKAVDLNPKHKDSLIR 381

Query: 371 LGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKD 428
           L  +         L  F  A    +K  +  P   +V NN+G++  +  + + A   +  
Sbjct: 382 LAVI------HTQLKMFDQAIEYYQKVIQLNPNNTDVQNNLGILFEQSNKLDEAINCY-- 433

Query: 429 ALGDGIWLTLLDSKT 443
                I +   DSKT
Sbjct: 434 --MKNIKINPNDSKT 446


>gi|291569288|dbj|BAI91560.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 917

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 18/245 (7%)

Query: 129 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           N G + +++ FY++A+ + P+    +   +G+  +  G +  A   +Q+A+ L+P+  EA
Sbjct: 84  NMGWFDEAISFYQQAIDLSPNW-ADLHYHLGMTWHWQGNIEGAIGCYQKAIALNPKLGEA 142

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
            + +A   L+ NE   I   ++ +Q+     P      N L       G   L +   + 
Sbjct: 143 YLDMA---LRLNERGDINTAIKVLQQGRINCPNFKEIFNTL-------GYLQLQQNQIDE 192

Query: 249 ALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
           A+A+        PT+   Y NL  ++  +G   +A   Y    K I+   +    Y  LG
Sbjct: 193 AIAIFQEALSIDPTEPLVYNNLGWAFARQGKLSEAIAAYH---KAISLKPDLAIAYSNLG 249

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
           ++     + R A+T F+K + I PDN       G+  + +G + +A    +KA  IDP+ 
Sbjct: 250 KLWQHKNNHRQAITYFQKAIAIEPDNIMFYSDCGNSCLIIGCLSQAMACFQKAIAIDPKF 309

Query: 365 AQAFI 369
            Q +I
Sbjct: 310 VQGYI 314


>gi|195998235|ref|XP_002108986.1| hypothetical protein TRIADDRAFT_18483 [Trichoplax adhaerens]
 gi|190589762|gb|EDV29784.1| hypothetical protein TRIADDRAFT_18483 [Trichoplax adhaerens]
          Length = 474

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 22/245 (8%)

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
           A+ V  L   +   I++ +E  Q+A  + P     L  +A   F   +H       + A+
Sbjct: 48  AIYVQGLILRQEGKIQESLEMFQKASILNPKNIDNLKQVARSLFLLARH-------KAAI 100

Query: 251 AVTNHGPTKSHSY-----YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            V N    +  S      +N    Y    ++ KA  Y  A++   N  HE    Y  LG+
Sbjct: 101 EVYNEISRQQTSVDWEVLHNQGICYLYLKEFTKAKEYLKAAID--NNRHEI--SYIHLGR 156

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
           V    G+ + A+  +++ LE  P+N E +  LG +Y+++GQ +KA E L +A   +P + 
Sbjct: 157 VFALEGNLQIAIDTYKQALEFSPENTEIMTTLGLLYIKIGQNQKAFEQLGQALIYNPSNV 216

Query: 366 QAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 424
           +A +  G ++ + +D   AL  ++ A ++     E  P+   NNIG+  F K +F +A  
Sbjct: 217 KAILAAGSMMQAHNDFDVALMKYRIAASV---EPESPPL--WNNIGMCFFGKKKFVAAVS 271

Query: 425 SFKDA 429
             K A
Sbjct: 272 CLKRA 276


>gi|406951596|gb|EKD81486.1| hypothetical protein ACD_39C01785G0001, partial [uncultured
           bacterium]
          Length = 387

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 16/274 (5%)

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           GL    L Q  +A + F +A  +DP + +A   L ++ LQ        K  + ++RA  I
Sbjct: 46  GLNHLLLEQNKQAEEMFIKAKSIDPYSEQAYNFLGLIYLQE---GLFEKAEDMLKRAVAI 102

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS-YHSKGDYE 277
            P    AL  L   +    +           LA+  + P   +++Y L  + Y S    E
Sbjct: 103 EPMYPEALRNLGKLYLRQDRFDEATTYLRRTLALDVNQP---YTWYLLGMAQYFSGKITE 159

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
               Y  A   E N P E    +Y LG    +   +  A+ ++E+VL+  P +   L  L
Sbjct: 160 SITSYENAFSMEPNLPVE---AHYNLGVAYHETSRYLEAVRSYEEVLKQEPAHINALNNL 216

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS-DTGAALDAFKTARTLLKK 396
           G +Y  LG+ ++A +L  +  KID  + +A I+LG + +S+ D   A   +++A +L   
Sbjct: 217 GLVYSILGEKDRAIDLFNQVLKIDNGNIKARINLGNVFLSTRDLVEAEKIYRSAISL--- 273

Query: 397 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             ++  I    N+GV+++EKG+F +A   + + L
Sbjct: 274 --DQSDISPRLNLGVVYYEKGDFANARAEWDNLL 305



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 141/336 (41%), Gaps = 22/336 (6%)

Query: 52  GKIETKQR------EKEEHFIL-----ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 100
           G I  K+R      E   H +L     A + + KA  ID +    +   G + L +G  E
Sbjct: 31  GPITAKERASSMIQEGLNHLLLEQNKQAEEMFIKAKSIDPYSEQAYNFLGLIYLQEGLFE 90

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
           +A    K  +  +     AL     +   + R+ ++  + +R L +  + P    L +G+
Sbjct: 91  KAEDMLKRAVAIEPMYPEALRNLGKLYLRQDRFDEATTYLRRTLALDVNQPYTWYL-LGM 149

Query: 161 CRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
            +Y  G++ ++  +++ A  ++P   VEA   L V     +E +   + +   +   +  
Sbjct: 150 AQYFSGKITESITSYENAFSMEPNLPVEAHYNLGV---AYHETSRYLEAVRSYEEVLKQE 206

Query: 220 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           P    ALN L   +   G+      L    L + N G  K+    NL   + S  D  +A
Sbjct: 207 PAHINALNNLGLVYSILGEKDRAIDLFNQVLKIDN-GNIKAR--INLGNVFLSTRDLVEA 263

Query: 280 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
              Y ++   I+     I P   LG V  + GDF +A   ++ +L+  PDN   L  +G 
Sbjct: 264 EKIYRSA---ISLDQSDISPRLNLGVVYYEKGDFANARAEWDNLLKENPDNVRVLSVMGS 320

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            Y++  + + A E+ ++  ++ P +      LG LL
Sbjct: 321 AYLERREYDLAIEVFKRMTELMPENGSIANTLGYLL 356



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 139/327 (42%), Gaps = 34/327 (10%)

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
           + L H+ ++  Q ++A+E+  KA  IDP   QA+  LG  LI    G     F+ A  +L
Sbjct: 45  EGLNHLLLE--QNKQAEEMFIKAKSIDPYSEQAYNFLG--LIYLQEGL----FEKAEDML 96

Query: 395 KKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 452
           K+A    P+  E L N+G ++  +  F+ A    +  L   +      ++  T+ +   A
Sbjct: 97  KRAVAIEPMYPEALRNLGKLYLRQDRFDEATTYLRRTLALDV------NQPYTWYLLGMA 150

Query: 453 SMLQFKDMQLFHRFEND-GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 511
                K  +    +EN       LP   V   +NL     +    + A   Y  +L +  
Sbjct: 151 QYFSGKITESITSYENAFSMEPNLP---VEAHYNLGVAYHETSRYLEAVRSYEEVLKQEP 207

Query: 512 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 571
            +++A   L  +         +I+L N+ LK++     A   LG++ L   D V+A++ +
Sbjct: 208 AHINALNNLGLVYSILGEKDRAIDLFNQVLKIDNGNIKARINLGNVFLSTRDLVEAEKIY 267

Query: 572 RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLY 631
           R+A  + D  D    L+LG   Y             E      A+  +  ++ ++  N+ 
Sbjct: 268 RSAI-SLDQSDISPRLNLGVVYY-------------EKGDFANARAEWDNLLKENPDNVR 313

Query: 632 AANGAGVVLAEKGQFDVSKDLFTQVQE 658
             +  G    E+ ++D++ ++F ++ E
Sbjct: 314 VLSVMGSAYLERREYDLAIEVFKRMTE 340



 Score = 47.0 bits (110), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)

Query: 535 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY 594
           +++  A+ +   YP AL  LG L L+ D + +A  T+   + A D    Y    LG   Y
Sbjct: 94  DMLKRAVAIEPMYPEALRNLGKLYLRQDRFDEAT-TYLRRTLALDVNQPYTWYLLGMAQY 152

Query: 595 FA------------ALRNEKRAP-----KLEATHLEKAKEL-----YTRVIVQHTSNLYA 632
           F+            A   E   P      L   + E ++ L     Y  V+ Q  +++ A
Sbjct: 153 FSGKITESITSYENAFSMEPNLPVEAHYNLGVAYHETSRYLEAVRSYEEVLKQEPAHINA 212

Query: 633 ANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 692
            N  G+V +  G+ D + DLF QV +  +G++  +     INL +V+ +  +   A K+Y
Sbjct: 213 LNNLGLVYSILGEKDRAIDLFNQVLKIDNGNIKAR-----INLGNVFLSTRDLVEAEKIY 267

Query: 693 QNCL 696
           ++ +
Sbjct: 268 RSAI 271


>gi|156743163|ref|YP_001433292.1| hypothetical protein Rcas_3220 [Roseiflexus castenholzii DSM 13941]
 gi|156234491|gb|ABU59274.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM
            13941]
          Length = 1178

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 178/441 (40%), Gaps = 52/441 (11%)

Query: 1    MQREYFKQGKVEQFRQILEEG--SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ 58
            M R Y   G+++  R +LE G  ++      YAD+ +E       LG+    LG+I+  +
Sbjct: 722  MSRLYRDAGRLDAARNVLERGQQNTARSARAYADIAHE-------LGLVLIDLGEIDRAE 774

Query: 59   REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP 118
            R+ E          +    +  H     +   QL   KG    A+  +   L+A   + P
Sbjct: 775  RQFEAAI------GSNPRHVRSH-----LMLAQLERRKGNDRAAARRYAAALDAGASD-P 822

Query: 119  ALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 177
            A+L Q  +     R Y+ ++  Y+RA+   P      R    L    +G+L  A ++ +R
Sbjct: 823  AVLDQIGMTLIELREYAPAVTAYERAIAQQPGN-AIFRYRAALAYLGIGRLDAADESARR 881

Query: 178  ALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA------LNYLAN 231
            AL+  P   EALV L  + LQ  ++   +   ++ + A +  P  A A      +  +  
Sbjct: 882  ALERQPIYPEALVLLGDIALQRGDS---QAANQQYRAALQQNPALAAAHIGLGRVAAVGG 938

Query: 232  HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
            ++     HFL               P    ++  L  +    GD + A   Y  +++  +
Sbjct: 939  NWSIAAGHFL---------NAVQADPQSPDAFLWLGEARVRVGDVDDAISAYQQALQLRS 989

Query: 292  KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
               E +F   GL Q Q   G    AL N  + LE      E    LG IY Q G   +A 
Sbjct: 990  AFPEALF---GLAQAQFGAGRIDEALRNVNRALEQRSRYAEAFLLLGKIYEQQGYSTRAL 1046

Query: 352  ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNI 409
            +  ++A   +PR A+       LLI +D          AR  L+ A    P   E    +
Sbjct: 1047 DAYKQAVDANPRLAEPHFRRALLLIRADR------LSEARDDLEIAARLEPNFAEAHYWL 1100

Query: 410  GVIHFEKGEFESAHQSFKDAL 430
            G ++F +  F++A   F++A+
Sbjct: 1101 GRVYFAQRNFQAAVNRFREAV 1121


>gi|443477489|ref|ZP_21067333.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
 gi|443017386|gb|ELS31839.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
          Length = 528

 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 131/299 (43%), Gaps = 25/299 (8%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           + G G  L  KG+++ A +A +  +  D+   PA  G     + +G  S +++ Y++ +Q
Sbjct: 100 YYGLGVALRQKGDIQGAINAHRQAITIDKSYTPAYYGLGIALYQKGDSSGAIDAYQQFIQ 159

Query: 146 VHPS----CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQAN 200
           +  +     P    LG+   R     + +A  +F++A++ DP+   A   L  V+  Q N
Sbjct: 160 LSKADTNLAPAYYNLGLAYERRN--NIDEAVASFRKAIEFDPKYALAHNGLGTVLRRQGN 217

Query: 201 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF----FTGQHFLVEQLTETALAVTNHG 256
                ++ +   ++A E+ P  A+A   L    +    +TG         E    VT   
Sbjct: 218 R----KEAIAAYRKAIELAPQYAVAHFALGISLYEDRDYTGA-------IEAYKRVTTLE 266

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P   + YYNL  +Y+   D   A   +  ++++  +  +    Y  LG V L+  +   A
Sbjct: 267 PNFPNVYYNLGLAYNQLSDRPNAIATFRKAIEQDPRNADI---YAILGSVFLRDENIPEA 323

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
              F++  EI P    +   LG    + G +E A    +K+  I+P  A A+ +LG +L
Sbjct: 324 AEAFKRSTEINPKVASSFNGLGLALRRQGDLEGAIAAYQKSITINPNYAVAYNNLGRVL 382



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 10/300 (3%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           + ++++A + ++  + A  + VPA  G       +G    ++  +++A+ +  S   A  
Sbjct: 76  QNQLDRALTLYRQAIAASPELVPAYYGLGVALRQKGDIQGAINAHRQAITIDKSYTPAY- 134

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
            G+G+  Y+ G    A  A+Q+ +QL   +     A   + L       I + +   ++A
Sbjct: 135 YGLGIALYQKGDSSGAIDAYQQFIQLSKADTNLAPAYYNLGLAYERRNNIDEAVASFRKA 194

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
            E  P  A+A N L       G           A+ +    P  + +++ L  S +   D
Sbjct: 195 IEFDPKYALAHNGLGTVLRRQGNRKEAIAAYRKAIEL---APQYAVAHFALGISLYEDRD 251

Query: 276 YEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           Y  A   Y   +  E N P+     YY LG    +L D  +A+  F K +E  P N +  
Sbjct: 252 YTGAIEAYKRVTTLEPNFPNV----YYNLGLAYNQLSDRPNAIATFRKAIEQDPRNADIY 307

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTL 393
             LG ++++   I +A E  +++ +I+P+ A +F  LG  L    D   A+ A++ + T+
Sbjct: 308 AILGSVFLRDENIPEAAEAFKRSTEINPKVASSFNGLGLALRRQGDLEGAIAAYQKSITI 367


>gi|203284115|ref|YP_002221855.1| hypothetical protein BDU_193 [Borrelia duttonii Ly]
 gi|386859420|ref|YP_006272126.1| hypothetical protein Q7M_195 [Borrelia crocidurae str. Achema]
 gi|201083558|gb|ACH93149.1| uncharacterized conserved protein [Borrelia duttonii Ly]
 gi|384934301|gb|AFI30974.1| hypothetical protein Q7M_195 [Borrelia crocidurae str. Achema]
          Length = 380

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 152/367 (41%), Gaps = 17/367 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +L+ D DN  AL+G   +E  +  +  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLFEAESLFNDILQKDDDNNYALVGLGDIERKKRNFDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  H +   A+  G+G C   LG   KA   ++  L+ D EN+  L  +A    
Sbjct: 79  IYYQKCLAKHSNNNYAL-FGLGDCYRSLGDYKKATDVWEEYLKYDSENITVLTRVAS--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   R  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSRQSYLRVLELVPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYEINQVK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ K G+Y+     EI+ P+ F +  +GL        ++  AL
Sbjct: 194 IDVRVLTSIGNCYRKLKEFGK-GIYFFKRALEIS-PNNF-YAIFGLADCYRGSKEYAEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  +++  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 378 SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW-L 436
            + G   +A    + L+K   +   + V  N+   +   G+ E A       L  G+  +
Sbjct: 308 KEQGQYEEALIAIKNLIKTNPKNSILYV--NVAECYEALGQIEDAIDILSSFLQLGMKNV 365

Query: 437 TLLDSKT 443
           T++D  T
Sbjct: 366 TIIDYIT 372



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 15/305 (4%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LG IE K+R    +F  A  YY K      +      G G    + G+ ++A+  ++  L
Sbjct: 64  LGDIERKKR----NFDKAIIYYQKCLAKHSNNNYALFGLGDCYRSLGDYKKATDVWEEYL 119

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           + D +N+  L   A        +  S + Y R L++ P    A+ +GIG   Y   +  +
Sbjct: 120 KYDSENITVLTRVASSYRKLKNFQKSRQSYLRVLELVPDNDYAL-VGIGHLYYDFKEYKE 178

Query: 171 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
           A + + +  +++   ++  V  ++ +    +     KG+   +RA EI P    A+  LA
Sbjct: 179 ALKYWLKMYEINQVKIDVRVLTSIGNCY-RKLKEFGKGIYFFKRALEISPNNFYAIFGLA 237

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
           + +   G     E L +  L + +  P  +     +  +Y    DYE A +YY  ++   
Sbjct: 238 DCY--RGSKEYAEAL-KYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKAL--- 291

Query: 291 NKPHEF-IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
               +F +F   GL  +Q + G +  AL   + +++  P N      +   Y  LGQIE 
Sbjct: 292 --DVDFDMFAILGLALLQKEQGQYEEALIAIKNLIKTNPKNSILYVNVAECYEALGQIED 349

Query: 350 AQELL 354
           A ++L
Sbjct: 350 AIDIL 354


>gi|443669694|ref|ZP_21134889.1| hypothetical protein C789_5429, partial [Microcystis aeruginosa
           DIANCHI905]
 gi|443330030|gb|ELS44783.1| hypothetical protein C789_5429, partial [Microcystis aeruginosa
           DIANCHI905]
          Length = 597

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 155/348 (44%), Gaps = 60/348 (17%)

Query: 110 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-------IGLCR 162
           L  + D V +L   A + +  G Y  +LEF +++L +        R G       +G   
Sbjct: 271 LNLELDLVASLNSLAGIYYCLGEYQKALEFCQQSLAITREI--GDRGGEAKSYNNLGNVY 328

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
           Y LG+  KA +  Q++L +  E                   G RKG              
Sbjct: 329 YSLGEYQKALEFHQQSLAITRE------------------IGDRKGE------------- 357

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVTNH-GPTK--SHSYYNLARSYHSKGDYEKA 279
           A + N L N ++  G++    +  + +LA+T   G  K  ++SY NL   Y+S G+Y+KA
Sbjct: 358 ANSYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGDRKGEANSYNNLGNVYYSLGEYQKA 417

Query: 280 GLYY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD------N 330
             +Y   +A ++EI         Y  LG V   LG+++ A+  +++ L I  +       
Sbjct: 418 IEFYQQSLAILREIGDRWGEAASYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGDRKGE 477

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPR------DAQAFIDLGELLIS-SDTGAA 383
             +   LG++Y  LG+ +KA E  +++  I         +A +++ LG +  S  +   A
Sbjct: 478 ANSYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGNRGGEANSYMGLGNVYDSLGEYQKA 537

Query: 384 LDAFKTARTLLKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           ++ ++ +  + ++ G   V  +  NN+G +++  GE++ A +  + +L
Sbjct: 538 IEFYQQSLAITREIGNRGVEAKSYNNLGAVYYSLGEYQKAIEFHQQSL 585



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 48/272 (17%)

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-------IGLCRYKLGQLGKARQAFQRA 178
           V ++ G Y  +LEF++++L +        R G       +G   Y LG+  KA + +Q++
Sbjct: 327 VYYSLGEYQKALEFHQQSLAITREI--GDRKGEANSYNNLGNVYYSLGEYQKAIEFYQQS 384

Query: 179 LQLDPENVEALVALAVMDLQA-----NEAAGIRKGMEKMQRAFEIYPYC----------- 222
           L +  E         + D +      N    +   + + Q+A E Y              
Sbjct: 385 LAITRE---------IGDRKGEANSYNNLGNVYYSLGEYQKAIEFYQQSLAILREIGDRW 435

Query: 223 --AMALNYLANHFFFTGQHFLVEQLTETALAVTNH-GPTK--SHSYYNLARSYHSKGDYE 277
             A + N L N ++  G++    +  + +LA+T   G  K  ++SY NL   Y+S G+Y+
Sbjct: 436 GEAASYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGDRKGEANSYNNLGNVYYSLGEYQ 495

Query: 278 KAGLYY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD----- 329
           KA  +Y   +A  +EI         Y GLG V   LG+++ A+  +++ L I  +     
Sbjct: 496 KAIEFYQQSLAITREIGNRGGEANSYMGLGNVYDSLGEYQKAIEFYQQSLAITREIGNRG 555

Query: 330 -NCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
              ++   LG +Y  LG+ +KA E  +++  I
Sbjct: 556 VEAKSYNNLGAVYYSLGEYQKAIEFHQQSLAI 587



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 137/299 (45%), Gaps = 49/299 (16%)

Query: 171 ARQAFQRALQLDPE-NVEALVALAVMDLQA--NEAAGIRKGMEKMQRAFEIYPYCAMAL- 226
           A + +Q+A+ L  E N+E       +DL A  N  AGI   + + Q+A E   +C  +L 
Sbjct: 257 AIEYYQKAIDLQKELNLE-------LDLVASLNSLAGIYYCLGEYQKALE---FCQQSLA 306

Query: 227 ---------------NYLANHFFFTGQHFLVEQLTETALAVTNH-GPTK--SHSYYNLAR 268
                          N L N ++  G++    +  + +LA+T   G  K  ++SY NL  
Sbjct: 307 ITREIGDRGGEAKSYNNLGNVYYSLGEYQKALEFHQQSLAITREIGDRKGEANSYNNLGN 366

Query: 269 SYHSKGDYEKAGLYY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
            Y+S G+Y+KA  +Y   +A  +EI         Y  LG V   LG+++ A+  +++ L 
Sbjct: 367 VYYSLGEYQKAIEFYQQSLAITREIGDRKGEANSYNNLGNVYYSLGEYQKAIEFYQQSLA 426

Query: 326 IYPD------NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR------DAQAFIDLGE 373
           I  +         +   LG++Y  LG+ +KA E  +++  I         +A ++ +LG 
Sbjct: 427 ILREIGDRWGEAASYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGDRKGEANSYNNLGN 486

Query: 374 LLIS-SDTGAALDAFKTARTLLKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           +  S  +   A++ ++ +  + ++ G           +G ++   GE++ A + ++ +L
Sbjct: 487 VYYSLGEYQKAIEFYQQSLAITREIGNRGGEANSYMGLGNVYDSLGEYQKAIEFYQQSL 545


>gi|430747186|ref|YP_007206315.1| O-linked N-acetylglucosamine transferase, SPINDLY family
           [Singulisphaera acidiphila DSM 18658]
 gi|430018906|gb|AGA30620.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Singulisphaera acidiphila DSM 18658]
          Length = 827

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 171/416 (41%), Gaps = 36/416 (8%)

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++ +A QA+++ L  DP  + A   L V     +    +   +   Q+   + P  A A
Sbjct: 18  GRIAQAEQAYRQVLSADPSYIPAWYLLGV---ACHGLGNLTGALGAFQQTLRLQPDHAEA 74

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
            N+L   +   G    +E+     L      P    +Y NLA ++  +G  ++A      
Sbjct: 75  QNHLGIVWAQAGS---LEEAVRCFLLTLQLQPNSLDAYKNLAVTFERQGRLDEA---VAC 128

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
             K +    +    +  LG +  K G +  A+   E+VL I P+  ETL  LG +    G
Sbjct: 129 DRKVVELKPDLAEAHRHLGVLLRKQGKWGEAIVALEQVLRIKPELPETLNDLGLLLEMTG 188

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK----AGEEV 401
           Q+E+A    + A ++ P  A A+ ++  +L     G   +A  + R  ++     AG   
Sbjct: 189 QLEEAVVRFQAAIRLRPEFAGAYSNMSVVL--KQLGRLDEAITSGREAVRLDPGFAGAH- 245

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK--TKTYVIDASASML-QFK 458
                NN+GVI  ++G ++ A   F +AL        LD +     Y + +  S L +F+
Sbjct: 246 -----NNLGVILEKEGGWDEATTCFHEALR-------LDPRFVEAYYNLGSVLSRLGRFE 293

Query: 459 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
           D +   R       + L  +      NLA  L +      A   YR  +    ++VD Y+
Sbjct: 294 DAESICR-----QAITLDPDSAEAHHNLAFALSERGQLTEAETNYRRAIQLKPEFVDPYV 348

Query: 519 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            L ++      L  +     EA++++     AL  LG + ++     +A   +R A
Sbjct: 349 NLTSVLGKFGKLDEAEACSREAVRLDPNRSEALVNLGFVLIEKGHIAEALAAYREA 404



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 152/340 (44%), Gaps = 28/340 (8%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G +E+A   F + L+   +++ A    A     +GR  +++   ++ +++ P    A R 
Sbjct: 86  GSLEEAVRCFLLTLQLQPNSLDAYKNLAVTFERQGRLDEAVACDRKVVELKPDLAEAHR- 144

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRA 215
            +G+   K G+ G+A  A ++ L++ PE  E L  L ++     E  G + + + + Q A
Sbjct: 145 HLGVLLRKQGKWGEAIVALEQVLRIKPELPETLNDLGLL----LEMTGQLEEAVVRFQAA 200

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH------GPTKSHSYYNLARS 269
             + P  A A         ++    +++QL     A+T+        P  + ++ NL   
Sbjct: 201 IRLRPEFAGA---------YSNMSVVLKQLGRLDEAITSGREAVRLDPGFAGAHNNLGVI 251

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
              +G +++A   +  +++   +   F+  YY LG V  +LG F  A +   + + + PD
Sbjct: 252 LEKEGGWDEATTCFHEALRLDPR---FVEAYYNLGSVLSRLGRFEDAESICRQAITLDPD 308

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
           + E    L     + GQ+ +A+   R+A ++ P     +++L  +L     G   +A   
Sbjct: 309 SAEAHHNLAFALSERGQLTEAETNYRRAIQLKPEFVDPYVNLTSVL--GKFGKLDEAEAC 366

Query: 390 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           +R  ++        E L N+G +  EKG    A  ++++A
Sbjct: 367 SREAVRLDPNRS--EALVNLGFVLIEKGHIAEALAAYREA 404



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 123/315 (39%), Gaps = 48/315 (15%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           + +LG +  KQ +  E  +   Q      RI    P T    G LL   G++E+A   F+
Sbjct: 143 HRHLGVLLRKQGKWGEAIVALEQVL----RIKPELPETLNDLGLLLEMTGQLEEAVVRFQ 198

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             +    +   A    + V    GR  +++   + A+++ P   GA    +G+   K G 
Sbjct: 199 AAIRLRPEFAGAYSNMSVVLKQLGRLDEAITSGREAVRLDPGFAGAHN-NLGVILEKEGG 257

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
             +A   F  AL+LDP  VEA   L  +             + ++ R  +    C  A+ 
Sbjct: 258 WDEATTCFHEALRLDPRFVEAYYNLGSV-------------LSRLGRFEDAESICRQAIT 304

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
                                        P  + +++NLA +   +G   +A   Y  ++
Sbjct: 305 L---------------------------DPDSAEAHHNLAFALSERGQLTEAETNYRRAI 337

Query: 288 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 347
           +   KP EF+ PY  L  V  K G    A     + + + P+  E L  LG + ++ G I
Sbjct: 338 QL--KP-EFVDPYVNLTSVLGKFGKLDEAEACSREAVRLDPNRSEALVNLGFVLIEKGHI 394

Query: 348 EKAQELLRKAAKIDP 362
            +A    R+A ++DP
Sbjct: 395 AEALAAYREAERVDP 409


>gi|333986950|ref|YP_004519557.1| hypothetical protein MSWAN_0723 [Methanobacterium sp. SWAN-1]
 gi|333825094|gb|AEG17756.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 401

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 153/362 (42%), Gaps = 41/362 (11%)

Query: 9   GKVEQFRQILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFIL 67
           GK+E + + LE    + E+D  Y +V Y +          YT++ K+E K RE       
Sbjct: 57  GKLENYPESLECYDKALELDPNYFNVWYNKG---------YTFV-KLE-KYRE------- 98

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y+KA  +D +    W  KG  L   GE  +A   +   LE D +       +    
Sbjct: 99  ALECYDKALELDPNYFGVWFNKGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYAL 158

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G YS++++ Y  AL + PS         G    KL +  +A +++ +AL+++P+   
Sbjct: 159 TELGEYSEAVKSYDTALGIDPS-DATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTY 217

Query: 188 ALVA--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A      A+ +L+ +  A     +E   +A EI P   +A           G++    + 
Sbjct: 218 AWTGRGSALTELKKHLEA-----VESYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKS 272

Query: 246 TETALAVTNHGP----TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            + AL +    P    +K ++   L +   +   Y+KA      ++  I+         Y
Sbjct: 273 YDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKA-----LAIDPIDS-----IALY 322

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
               + L++G +  AL +F+K LEI PD        G  + +L   ++A +   KA K+D
Sbjct: 323 NKANIMLEIGKYPEALESFDKALEIDPDYVNAWNDKGETFTKLENYQEALKCYEKALKLD 382

Query: 362 PR 363
           P 
Sbjct: 383 PN 384



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 146/339 (43%), Gaps = 50/339 (14%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YNK  + D++  + W GKG +L       ++   +   LE D +       +        
Sbjct: 35  YNKILQTDLYYTNAWYGKGVVLGKLENYPESLECYDKALELDPNYFNVWYNKGYTFVKLE 94

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP-------- 183
           +Y ++LE Y +AL++ P+  G +    G    +LG+  +A + +  AL+LDP        
Sbjct: 95  KYREALECYDKALELDPNYFG-VWFNKGYALTELGEYLEALECYDEALELDPNYFGVWFN 153

Query: 184 ---------ENVEAL----VALAVMDLQA-------NEAAGIRKGMEKMQ---RAFEIYP 220
                    E  EA+     AL +    A       N    ++K +E ++   +A EI P
Sbjct: 154 KGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIESYDKALEINP 213

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKG 274
               A         +TG+   + +L +   AV ++       P    +++N   S  + G
Sbjct: 214 KFTYA---------WTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALG 264

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
            Y +A   Y  ++ EI+ P + I  ++  G    +LG +  AL +++K L I P +   L
Sbjct: 265 KYLEAVKSYDRAL-EID-PGDPI-TWFSKGYALAELGKYSDALESYDKALAIDPIDSIAL 321

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
               +I +++G+  +A E   KA +IDP    A+ D GE
Sbjct: 322 YNKANIMLEIGKYPEALESFDKALEIDPDYVNAWNDKGE 360



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/319 (21%), Positives = 132/319 (41%), Gaps = 50/319 (15%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K E++  + + Y+KA  +D +  + W  KG   +   +  +A   +   LE D +     
Sbjct: 58  KLENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFGVW 117

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
             +       G Y ++LE Y  AL++ P+  G +    G    +LG+  +A +++  AL 
Sbjct: 118 FNKGYALTELGEYLEALECYDEALELDPNYFG-VWFNKGYALTELGEYSEAVKSYDTALG 176

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQ---RAFEIYPYCAMALNYLANHFFFTG 237
           +DP +            + N    ++K +E ++   +A EI P    A         +TG
Sbjct: 177 IDPSDATTWYN------RGNILTKLKKYVEAIESYDKALEINPKFTYA---------WTG 221

Query: 238 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
           +   + +L +   AV +                     Y+KA         EI+  H  +
Sbjct: 222 RGSALTELKKHLEAVES---------------------YDKA--------LEIDPKH--V 250

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             ++  G     LG +  A+ ++++ LEI P +  T  + G+   +LG+   A E   KA
Sbjct: 251 LAWFNRGYSLAALGKYLEAVKSYDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKA 310

Query: 358 AKIDPRDAQAFIDLGELLI 376
             IDP D+ A  +   +++
Sbjct: 311 LAIDPIDSIALYNKANIML 329



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 147/333 (44%), Gaps = 39/333 (11%)

Query: 10  KVEQFRQILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILA 68
           K+E++R+ LE    + E+D  Y  V + +   L  LG Y                  + A
Sbjct: 92  KLEKYREALECYDKALELDPNYFGVWFNKGYALTELGEY------------------LEA 133

Query: 69  TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 128
            + Y++A  +D +    W  KG  L   GE  +A  ++   L  D  +      +  +  
Sbjct: 134 LECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILT 193

Query: 129 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
              +Y +++E Y +AL+++P    A   G G    +L +  +A +++ +AL++DP++V A
Sbjct: 194 KLKKYVEAIESYDKALEINPKFTYAWT-GRGSALTELKKHLEAVESYDKALEIDPKHVLA 252

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQ---RAFEIYPYCAMALNYLANHFFFT--GQHFLVE 243
                    +    A + K +E ++   RA EI P     + + +  +     G++    
Sbjct: 253 WFN------RGYSLAALGKYLEAVKSYDRALEIDP--GDPITWFSKGYALAELGKYSDAL 304

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           +  + ALA+    P  S + YN A      G Y +A L       EI+   +++  +   
Sbjct: 305 ESYDKALAID---PIDSIALYNKANIMLEIGKYPEA-LESFDKALEIDP--DYVNAWNDK 358

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
           G+   KL +++ AL  +EK L++ P+  + LKA
Sbjct: 359 GETFTKLENYQEALKCYEKALKLDPNFEDALKA 391



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/364 (21%), Positives = 140/364 (38%), Gaps = 62/364 (17%)

Query: 75  ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 134
            +  D  + ++ + K   L  +G+ ++A   +  +L+ D     A  G+  V      Y 
Sbjct: 4   VTVFDSFKKNSLIKKAYNLTEQGKYQEALGCYNKILQTDLYYTNAWYGKGVVLGKLENYP 63

Query: 135 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
           +SLE Y +AL++ P+    +    G    KL +  +A + + +AL+LDP           
Sbjct: 64  ESLECYDKALELDPNYFN-VWYNKGYTFVKLEKYREALECYDKALELDPNYFGVWFNKGY 122

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
                 E     + +E    A E+ P      NY    F    + + + +L E + AV +
Sbjct: 123 ---ALTELGEYLEALECYDEALELDP------NYFGVWF---NKGYALTELGEYSEAVKS 170

Query: 255 HG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
           +       P+ + ++YN                                      G +  
Sbjct: 171 YDTALGIDPSDATTWYNR-------------------------------------GNILT 193

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
           KL  +  A+ +++K LEI P         G    +L +  +A E   KA +IDP+   A+
Sbjct: 194 KLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAW 253

Query: 369 IDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
            + G  L +   G  L+A K+  R L    G+  PI   +  G    E G++  A +S+ 
Sbjct: 254 FNRGYSLAA--LGKYLEAVKSYDRALEIDPGD--PITWFSK-GYALAELGKYSDALESYD 308

Query: 428 DALG 431
            AL 
Sbjct: 309 KALA 312


>gi|268324093|emb|CBH37681.1| hypothetical protein, containing TPR repeats [uncultured archaeon]
 gi|268326410|emb|CBH39998.1| hypothetical membrane protein, containing TPR repeats [uncultured
           archaeon]
          Length = 739

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 14/308 (4%)

Query: 70  QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 129
           QY +KA  ID      W  KG +L   G  E+A +A+   +E +     A   +      
Sbjct: 282 QYLDKAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLGK 341

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
            G+Y +++  + +A+++ P C  A     G     LG+  +A  A  +A++++ +   A 
Sbjct: 342 LGKYEEAIAAFNKAIEIKPQCAEAWN-NKGAALRDLGRYEEAIAAHDKAIEINSQYARAW 400

Query: 190 --VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
               +A+ DL  NE A     +    +A EI P  A A N         G++       +
Sbjct: 401 NNKGVALCDLGRNEEA-----IAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACD 455

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            A+ +    P  + ++ N   +    G YE+A     A  K I    ++   +   G   
Sbjct: 456 KAIEIN---PQFAEAWNNKGAALGKLGRYEEA---IAACDKAIETNPQYAEAWNNKGLAL 509

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             LG +  A+   +K +EI           G     LG+ E+A      A +I+PRDA+A
Sbjct: 510 SGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDAEA 569

Query: 368 FIDLGELL 375
           + + G  L
Sbjct: 570 WNNKGVAL 577



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 155/393 (39%), Gaps = 42/393 (10%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   +NKA  I       W  KG  L   G  E+A +A    +E +     A   +    
Sbjct: 348 AIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGVAL 407

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + GR  +++  Y +A++++P   GA     G    KLG+  +A  A  +A++++P+  E
Sbjct: 408 CDLGRNEEAIAAYDKAIEINPQFAGAWN-NKGAALGKLGRYEEAIAACDKAIEINPQFAE 466

Query: 188 AL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH-FLV 242
           A      AL  +       A   K +E   +  E +    +AL+ L  +      H   +
Sbjct: 467 AWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAI 526

Query: 243 EQLTETALAVTNHG-----------------------PTKSHSYYNLARSYHSKGDYEKA 279
           E  ++ A A TN G                       P  + ++ N   +    G YE+A
Sbjct: 527 EINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEA 586

Query: 280 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
                A  K I    ++   +   G     LG +  A+  +++ +EI P   E     G 
Sbjct: 587 ---IAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQYAEAWNNKGI 643

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKK 396
               LG+ E A      A +I+P+ A A+ + G  L  SD G    A+ A+  A  +  +
Sbjct: 644 ALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVAL--SDLGRYEEAIAAYDNAIEINPQ 701

Query: 397 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
                  E  NN GV+    G +E A ++F+ A
Sbjct: 702 LA-----EAWNNKGVVLGWSGRYEEAKEAFEKA 729



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 24/297 (8%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           +KA  I+      W  KG  L   G  E+A +A    +E +     A   +       G+
Sbjct: 455 DKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGK 514

Query: 133 YSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-- 189
           Y +++  + +A++++    GA    GI LC   LG+  +A  A   A++++P + EA   
Sbjct: 515 YEEAIAAHDKAIEINSQYAGAWTNKGIALCH--LGRYEEAIAACDNAIEINPRDAEAWNN 572

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
             +A+  L   E A     +    +A EI    A A N         G++       E A
Sbjct: 573 KGVALSGLGKYEEA-----IAAHDKAIEINSQYAGAWNNKGVALRGLGRY-------EEA 620

Query: 250 LAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
           +A  +      P  + ++ N   +    G YE A   Y  ++ EIN   ++   +   G 
Sbjct: 621 IAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAI-EINP--QYADAWTNKGV 677

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
               LG +  A+  ++  +EI P   E     G +    G+ E+A+E   KA +IDP
Sbjct: 678 ALSDLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHEIDP 734



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 121/303 (39%), Gaps = 31/303 (10%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           + +  ++ ++ F+  A + + +C   +   I  C Y    L K+ Q   +A+++DP+  +
Sbjct: 239 YKKSNFTSAITFFTSA-KDYENCSSTLCY-IASCYYFNSNLNKSLQYLDKAVEIDPQYAQ 296

Query: 188 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
                 + +  L  NE A     +    +A EI    A A N         G++      
Sbjct: 297 IWNNKGIVLGKLGRNEEA-----IAAYDKAIEINSQYAKAWNNKGATLGKLGKY------ 345

Query: 246 TETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
            E A+A  N      P  + ++ N   +    G YE+A     A  K I    ++   + 
Sbjct: 346 -EEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEA---IAAHDKAIEINSQYARAWN 401

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             G     LG    A+  ++K +EI P         G    +LG+ E+A     KA +I+
Sbjct: 402 NKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIEIN 461

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEF 419
           P+ A+A+ + G  L        L  ++ A     KA E  P   E  NN G+     G++
Sbjct: 462 PQFAEAWNNKGAAL------GKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKY 515

Query: 420 ESA 422
           E A
Sbjct: 516 EEA 518



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y++A  I+      W  KG  L   G+ E A +A+   +E +     A   +    
Sbjct: 620 AIAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVAL 679

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
            + GRY +++  Y  A++++P    A     G+     G+  +A++AF++A ++DP
Sbjct: 680 SDLGRYEEAIAAYDNAIEINPQLAEAWN-NKGVVLGWSGRYEEAKEAFEKAHEIDP 734


>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
 gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
          Length = 353

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 10/267 (3%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +G   +A S ++ ++  D +N  A          +G+  ++   YK+A+++ P+   A  
Sbjct: 39  EGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAAYKKAIELDPNYSFAYN 98

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
             +G    K G+L +A  A+++A++LDP +     A   M L  ++   + + +   ++A
Sbjct: 99  -NMGNALRKQGKLEEAIAAYKKAIELDPNDA---FAYNNMGLALDDQGKLEEAIAAYKKA 154

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
            E+ P  A A   + N     G+   +E+            P  S +Y N+  +   +G 
Sbjct: 155 IELDPNYATAYYNMGNALNRQGK---LEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGK 211

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
           Y++A   Y  ++ EIN    + F Y  +G    K G +  A+  ++K +EI P++     
Sbjct: 212 YDEAIAAYKKAI-EINP--NYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGYN 268

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDP 362
            +G      G+ ++A    +KA +IDP
Sbjct: 269 NMGLALDDQGKYDEAIAAHKKALEIDP 295



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 129 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           N GRY ++   +++ + +  S        IGL   K G+L +A  A+++A++LDP     
Sbjct: 38  NEGRYREAESIWRQIISID-SNNAIAYFYIGLALRKQGKLEEATAAYKKAIELDPNYS-- 94

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
             A   M     +   + + +   ++A E+ P  A A N +        Q  L E +   
Sbjct: 95  -FAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNMG--LALDDQGKLEEAIAAY 151

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
             A+    P  + +YYN+  + + +G  E+A     A  K I     + F Y  +G    
Sbjct: 152 KKAIE-LDPNYATAYYNMGNALNRQGKLEEA---IAAYKKAIELDPNYSFAYNNMGVALR 207

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
           K G +  A+  ++K +EI P+       +G    + G+ ++A    +KA +I+P DA  +
Sbjct: 208 KQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGY 267

Query: 369 IDLG 372
            ++G
Sbjct: 268 NNMG 271



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 127/275 (46%), Gaps = 16/275 (5%)

Query: 9   GKVEQFRQILEEGSSPEIDEYYAD---VRYERIAILNALGVYYTYLGKIETKQREKEEHF 65
           G  +   Q+ ++G+  + +  Y +   +  + I+I +   + Y Y+G    KQ + EE  
Sbjct: 21  GMTQSIEQLFQQGNQAQNEGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEE-- 78

Query: 66  ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
             AT  Y KA  +D +    +   G  L  +G++E+A +A+K  +E D ++  A      
Sbjct: 79  --ATAAYKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNMGL 136

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
              ++G+  +++  YK+A+++ P+   A   +G  L R   G+L +A  A+++A++LDP 
Sbjct: 137 ALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGNALNR--QGKLEEAIAAYKKAIELDPN 194

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
                 A   M +   +     + +   ++A EI P  A A N +       G++     
Sbjct: 195 YS---FAYNNMGVALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIA 251

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
             + A+ +    P  +  Y N+  +   +G Y++A
Sbjct: 252 AYKKAIEIN---PNDAFGYNNMGLALDDQGKYDEA 283



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 11/171 (6%)

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           +Y+ +  +   +G  E+A   Y    K I     + F Y  +G    K G    A+  ++
Sbjct: 62  AYFYIGLALRKQGKLEEATAAYK---KAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYK 118

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
           K +E+ P++      +G      G++E+A    +KA ++DP  A A+ ++G  L      
Sbjct: 119 KAIELDPNDAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGNALNRQGK- 177

Query: 382 AALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
                 + A    KKA E  P      NN+GV   ++G+++ A  ++K A+
Sbjct: 178 -----LEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKKAI 223



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  +G    +Q + EE    A   Y KA  +D +    +   G  L  +G+ ++A +A+K
Sbjct: 165 YYNMGNALNRQGKLEE----AIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYK 220

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             +E + +   A          +G+Y +++  YK+A++++P+        +GL     G+
Sbjct: 221 KAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGYN-NMGLALDDQGK 279

Query: 168 LGKARQAFQRALQLDPENVEA 188
             +A  A ++AL++DP  V A
Sbjct: 280 YDEAIAAHKKALEIDPNLVLA 300


>gi|118401580|ref|XP_001033110.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89287457|gb|EAR85447.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 3068

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 151/352 (42%), Gaps = 30/352 (8%)

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            G L L   E+ ++   FK VL+ + +++P+L+  A +   +G +  S +++K AL   P+
Sbjct: 2621 GTLYLKNKEITKSGECFKKVLQQNSEHIPSLIEYATILSLKGEFEKSKKYFKIALSKDPN 2680

Query: 150  ---CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 206
               C   +RLG  +   KL  + +A   F++ + ++P+  +A   L  M  Q+      +
Sbjct: 2681 NLIC--NLRLG-KIYLNKLNNINRAIDCFKQIISIEPKYSKAHFQLG-MAYQS--RKDFK 2734

Query: 207  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHS 262
               E  ++   I P  A A   L   F  TG        TE AL     G    P     
Sbjct: 2735 LAAECFKQCISINPNNADAWQQLGTIFQETGN-------TEKALMYFQKGLVFNPNDFQL 2787

Query: 263  YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
               +A  Y+   +Y+ A   Y   +K  NK  +    Y  L        D  +A+  +++
Sbjct: 2788 QKGIANCYYFTENYDTAIEKYENLLK--NKQDDEALQY--LADCYYTKDDVENAIYYYKQ 2843

Query: 323  VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTG 381
             LEI P     L  LG+ Y      E+AQ+   +  ++D  +A A+ +L  +  I +D  
Sbjct: 2844 CLEINPKRPNCLYNLGNAYCTQNNYEEAQQAYIECIQLDTTNASAYYNLANVYYIQNDYE 2903

Query: 382  AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 433
             AL  F+ A   ++K    V  E  N I  ++ +  +F+ A Q    A  DG
Sbjct: 2904 NALINFELA---IEKDPSNV--EWRNYIAGLYIDNNQFDKAIQHLLKAYDDG 2950



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 137/316 (43%), Gaps = 35/316 (11%)

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE--FNRGRYSDSLEFYK----RA 143
            G + +   +VE A   F  V E   D +P  +  A  E       +  +LE YK     +
Sbjct: 2410 GIISIEDNDVENAKLNFLKVAELQPDFMPERIHFAIAEIFLQTQNWEQALEHYKIQYKYS 2469

Query: 144  LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL-QLDPENVEALVALAVMDLQANEA 202
               + SC     L IG C  KL  L KA+++F+ A+ Q D ++ +    L  +  Q N+ 
Sbjct: 2470 QDKYTSC-----LRIGKCFKKLNNLEKAKKSFENAIAQNDQKDYKCFYKLGSIFFQENK- 2523

Query: 203  AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA-----VTNHGP 257
              +++ ++   +A  +       L  L       GQ +L +   E ++      +T+   
Sbjct: 2524 --VKEAIDNFSKALSLNAQDIKILVKL-------GQIYLEQDKEENSIQEAFQYLTDAIQ 2574

Query: 258  TKSHSY---YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
               ++Y    +L + Y  +G+ E A  +   +++   +P   I   Y LG + LK  +  
Sbjct: 2575 LDENNYECLISLGKLYDKQGELENAIKFTELAIQ---RPEHNINSMYYLGTLYLKNKEIT 2631

Query: 315  SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             +   F+KVL+   ++  +L     I    G+ EK+++  + A   DP +    + LG++
Sbjct: 2632 KSGECFKKVLQQNSEHIPSLIEYATILSLKGEFEKSKKYFKIALSKDPNNLICNLRLGKI 2691

Query: 375  LIS--SDTGAALDAFK 388
             ++  ++   A+D FK
Sbjct: 2692 YLNKLNNINRAIDCFK 2707



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 50/254 (19%)

Query: 179 LQLDPENVEALVALAVMDLQ----ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           L+L+P++VEA + L V  L+    A +    RK +E+++++ E+ P   + L        
Sbjct: 150 LRLNPKSVEA-INLKVNCLKQLKGAKDNNLNRKCIEELKKSLELEPNNVLTL-------- 200

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY-MASVKEINKP 293
                                        +N+A  Y+   DY+ A  YY M S +     
Sbjct: 201 -----------------------------FNIATCYYELSDYKNAIKYYEMLSKQNFQDA 231

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
                 Y+ L     K+ D  +A  N++K L++       +    ++ +++G++E+++ L
Sbjct: 232 R----VYFNLALSYEKINDTYNAQVNYDKTLKLNSSFSGAVVNYSNLLIRIGELEQSRLL 287

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 413
           L    K  PRD +A  +L  +L         D     + +L+K     P  +L N GV+ 
Sbjct: 288 LESHLKYQPRDEKAINNLNIILAEKRQDKQADIL--FKKILRKQNGFTP-SILYNHGVLL 344

Query: 414 FEKGEFESAHQSFK 427
           F++ +  SA Q+F+
Sbjct: 345 FKQNKLISALQAFQ 358



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 126/310 (40%), Gaps = 36/310 (11%)

Query: 90   GQLLLAKGEVEQASSAFK-IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
            G+       +E+A  +F+  + + D+ +         + F   +  ++++ + +AL ++ 
Sbjct: 2480 GKCFKKLNNLEKAKKSFENAIAQNDQKDYKCFYKLGSIFFQENKVKEAIDNFSKALSLNA 2539

Query: 149  SCPGAIRLGIGLCRYKLGQ---LGKARQAFQ---RALQLDPENVEALVALAVM-DLQANE 201
                 I++ + L +  L Q       ++AFQ    A+QLD  N E L++L  + D Q   
Sbjct: 2540 Q---DIKILVKLGQIYLEQDKEENSIQEAFQYLTDAIQLDENNYECLISLGKLYDKQGEL 2596

Query: 202  AAGIRKGMEKMQRA-FEIYPYCAMALNYLAN-HFFFTGQHFL---------VEQLTETAL 250
               I+     +QR    I     +   YL N     +G+ F          +  L E A 
Sbjct: 2597 ENAIKFTELAIQRPEHNINSMYYLGTLYLKNKEITKSGECFKKVLQQNSEHIPSLIEYAT 2656

Query: 251  AVTNHGP-TKSHSYYNLARSYHSKG--DYEKAGLYYMASVKEINKPHEF------IFPYY 301
             ++  G   KS  Y+ +A S          + G  Y+  +  IN+  +       I P Y
Sbjct: 2657 ILSLKGEFEKSKKYFKIALSKDPNNLICNLRLGKIYLNKLNNINRAIDCFKQIISIEPKY 2716

Query: 302  GLGQVQLKLG-----DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
                 QL +      DF+ A   F++ + I P+N +  + LG I+ + G  EKA    +K
Sbjct: 2717 SKAHFQLGMAYQSRKDFKLAAECFKQCISINPNNADAWQQLGTIFQETGNTEKALMYFQK 2776

Query: 357  AAKIDPRDAQ 366
                +P D Q
Sbjct: 2777 GLVFNPNDFQ 2786



 Score = 43.1 bits (100), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 102/483 (21%), Positives = 177/483 (36%), Gaps = 125/483 (25%)

Query: 300  YYGLGQVQLKLGDFRSALTNFEKVLEIYPD------------------NCETLKALGHIY 341
            +Y LG + ++  D  +A  NF KV E+ PD                  N E  +AL H  
Sbjct: 2406 HYKLGIISIEDNDVENAKLNFLKVAELQPDFMPERIHFAIAEIFLQTQNWE--QALEHYK 2463

Query: 342  VQ--------------------LGQIEKAQELLRKA-AKIDPRDAQAFIDLGELLISSD- 379
            +Q                    L  +EKA++    A A+ D +D + F  LG +    + 
Sbjct: 2464 IQYKYSQDKYTSCLRIGKCFKKLNNLEKAKKSFENAIAQNDQKDYKCFYKLGSIFFQENK 2523

Query: 380  TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 439
               A+D F  A +L  +      I++L  +G I+ E+ + E++ Q     L D I L   
Sbjct: 2524 VKEAIDNFSKALSLNAQD-----IKILVKLGQIYLEQDKEENSIQEAFQYLTDAIQLD-- 2576

Query: 440  DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 499
                  Y    S   L  K  +L +  +     ++ P + +  ++ L  L  +  +   +
Sbjct: 2577 ---ENNYECLISLGKLYDKQGELENAIKFTELAIQRPEHNINSMYYLGTLYLKNKEITKS 2633

Query: 500  SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 559
               ++ +L +  +++ + +  A I                           LS+ G+ E 
Sbjct: 2634 GECFKKVLQQNSEHIPSLIEYATI---------------------------LSLKGEFE- 2665

Query: 560  KNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRA-----------PKLE 608
                  K+K+ F+ A  + D  +    L LG   Y   L N  RA           PK  
Sbjct: 2666 ------KSKKYFKIAL-SKDPNNLICNLRLGKI-YLNKLNNINRAIDCFKQIISIEPKYS 2717

Query: 609  ATHLE------------KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQV 656
              H +             A E + + I  + +N  A    G +  E G  + +   F   
Sbjct: 2718 KAHFQLGMAYQSRKDFKLAAECFKQCISINPNNADAWQQLGTIFQETGNTEKALMYF--- 2774

Query: 657  QEAASGSVFVQMPD---VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 713
                 G VF   P+   +   +A+ Y+   N+  A++ Y+N L+      D + L YLA 
Sbjct: 2775 ---QKGLVF--NPNDFQLQKGIANCYYFTENYDTAIEKYENLLKN---KQDDEALQYLAD 2826

Query: 714  THY 716
             +Y
Sbjct: 2827 CYY 2829


>gi|91202455|emb|CAJ72094.1| similar to Tpr region of human peroxisomal targeting signal-1
           receptor Pex5 [Candidatus Kuenenia stuttgartiensis]
          Length = 312

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 14/244 (5%)

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           R    +E  K A++ +P+ P A+   + +   K G L +A  A+++A +L+P + EALV 
Sbjct: 55  RPDKEIEAAKAAVEANPNDP-AVYYNLAVLSDKKGMLDEAVDAYKKATELNPSSEEALVG 113

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
           L  +    N+ A   + +   ++A  I    A A   L       G      +L   A+A
Sbjct: 114 LGKV---LNKKAKSDEAITAFEKALAININNAEAYEGLGLVHVHKGGPDEAIRLFNRAVA 170

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
           +    P    S YNL   Y   G +E+A   ++ ++K   K  EF   +Y LG    KLG
Sbjct: 171 IN---PDLVESRYNLGILYAKNGQFEEAIAEWLKAIKINPKRTEF---HYNLGIAYTKLG 224

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
               A+  ++  LE   +    L  +G +Y++ G  + A+  L KA ++DP     F D+
Sbjct: 225 KLEDAIAVWQNALENTEEISSFLYLIGLVYIEKGDAKSAESFLNKALEVDPE----FYDV 280

Query: 372 GELL 375
            ++L
Sbjct: 281 HKVL 284



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 4/131 (3%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y GLG V +  G    A+  F + + I PD  E+   LG +Y + GQ E+A     KA K
Sbjct: 145 YEGLGLVHVHKGGPDEAIRLFNRAVAINPDLVESRYNLGILYAKNGQFEEAIAEWLKAIK 204

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
           I+P+  +   +LG  +  +  G   DA    +  L+   EE+    L  IG+++ EKG+ 
Sbjct: 205 INPKRTEFHYNLG--IAYTKLGKLEDAIAVWQNALENT-EEIS-SFLYLIGLVYIEKGDA 260

Query: 420 ESAHQSFKDAL 430
           +SA      AL
Sbjct: 261 KSAESFLNKAL 271



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 1/120 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y KA+ ++       VG G++L  K + ++A +AF+  L  + +N  A  G   V 
Sbjct: 93  AVDAYKKATELNPSSEEALVGLGKVLNKKAKSDEAITAFEKALAININNAEAYEGLGLVH 152

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            ++G   +++  + RA+ ++P    + R  +G+   K GQ  +A   + +A++++P+  E
Sbjct: 153 VHKGGPDEAIRLFNRAVAINPDLVES-RYNLGILYAKNGQFEEAIAEWLKAIKINPKRTE 211


>gi|456355544|dbj|BAM89989.1| hypothetical protein S58_40030 [Agromonas oligotrophica S58]
          Length = 1410

 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 10/288 (3%)

Query: 87   VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
            V   + L ++GE+  A   F+++L     N  AL+G   +     R  ++ ++++RA+ V
Sbjct: 786  VAVAKKLQSRGEISDAEQIFQLILAGQPANFDALVGLGVICTTANRLDEAKDYFQRAVAV 845

Query: 147  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 206
            + +   A    IG      G+   A Q ++ AL L P +   L A A++  + N+   I 
Sbjct: 846  NDTSAEA-HGSIGAVEASAGRYEAAEQHYETALSLAPSHPGILYAFAMV--RQNQGR-IE 901

Query: 207  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
            + M  ++RA +  P    A   L N  +  G+     +     L V +  P  + ++ N+
Sbjct: 902  ESMALLRRAIDNRPQHLDAHFALGNLLYAAGKDI---EAARCYLKVLDFSPEHAETHNNI 958

Query: 267  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
            A     +G  E+A  +Y  ++   ++P ++   Y  LG   L+L     ++      ++I
Sbjct: 959  ANVLLRQGHRERAIEHYKRAIA--SRP-DYADAYGNLGNAFLELNRLEESIEQNLLAIKI 1015

Query: 327  YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             P    +   LG  Y  LG+ E+A    +KA ++ P DA   ++L  +
Sbjct: 1016 KPHRFGSYNNLGVAYQALGRFEEATAAFQKALELAPDDAPIHLNLANM 1063



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 46/252 (18%)

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG AC     GR+S+++  Y RALQ+ P+ P  + L IG C+   GQL  A + +Q+AL 
Sbjct: 192 LGDACRML--GRHSEAIAHYYRALQIQPNAP-VVLLNIGGCQQASGQLDAAIRTYQQALA 248

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L P   EA   L  + L                   E+  + A   +Y            
Sbjct: 249 LSPHLAEAHYNLGNLHL-------------------EMKSWPAAIFHY------------ 277

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
                 E A+A     P    ++ NLA + HS+G +++A  +Y  +V+   +  ++   +
Sbjct: 278 ------ERAIA---ERPDFPEAHNNLANALHSRGRHDEALAHYDEAVR---RRSDYAAAH 325

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
              G     +  F  A+ ++   L   P +  T+  L  + + LG++++A      A  +
Sbjct: 326 RNRGDALRDIKRFEQAIASYRAALVHDPRDLTTMNHLAGVLMILGRLDEAARAYESALAV 385

Query: 361 DPRDAQAFIDLG 372
           +PR+    ++ G
Sbjct: 386 NPRNVGVHLNYG 397



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 21/269 (7%)

Query: 166  GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
            G++  A Q FQ  L   P N +ALV L V+   AN    + +  +  QRA  +    A A
Sbjct: 796  GEISDAEQIFQLILAGQPANFDALVGLGVICTTANR---LDEAKDYFQRAVAVNDTSAEA 852

Query: 226  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
               +       G++   EQ  ETAL++    P+     Y  A    ++G  E++    MA
Sbjct: 853  HGSIGAVEASAGRYEAAEQHYETALSL---APSHPGILYAFAMVRQNQGRIEES----MA 905

Query: 286  SVKEI--NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             ++    N+P + +  ++ LG +    G    A   + KVL+  P++ ET   + ++ ++
Sbjct: 906  LLRRAIDNRP-QHLDAHFALGNLLYAAGKDIEAARCYLKVLDFSPEHAETHNNIANVLLR 964

Query: 344  LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA--RTLLKKAGEEV 401
             G  E+A E  ++A    P  A A+ +LG   +       L+  + +  + LL    +  
Sbjct: 965  QGHRERAIEHYKRAIASRPDYADAYGNLGNAFLE------LNRLEESIEQNLLAIKIKPH 1018

Query: 402  PIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                 NN+GV +   G FE A  +F+ AL
Sbjct: 1019 RFGSYNNLGVAYQALGRFEEATAAFQKAL 1047



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 91/229 (39%), Gaps = 11/229 (4%)

Query: 51   LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
            LG I T     +E    A  Y+ +A  ++          G +  + G  E A   ++  L
Sbjct: 822  LGVICTTANRLDE----AKDYFQRAVAVNDTSAEAHGSIGAVEASAGRYEAAEQHYETAL 877

Query: 111  EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
                 +   L   A V  N+GR  +S+   +RA+   P    A    +G   Y  G+  +
Sbjct: 878  SLAPSHPGILYAFAMVRQNQGRIEESMALLRRAIDNRPQHLDA-HFALGNLLYAAGKDIE 936

Query: 171  ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
            A + + + L   PE+ E    +A + L+        + +E  +RA    P  A A   L 
Sbjct: 937  AARCYLKVLDFSPEHAETHNNIANVLLRQGHR---ERAIEHYKRAIASRPDYADAYGNLG 993

Query: 231  NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
            N F    +   +E+  E  L      P +  SY NL  +Y + G +E+A
Sbjct: 994  NAFLELNR---LEESIEQNLLAIKIKPHRFGSYNNLGVAYQALGRFEEA 1039


>gi|409993902|ref|ZP_11277028.1| hypothetical protein APPUASWS_22358 [Arthrospira platensis str.
           Paraca]
 gi|409935250|gb|EKN76788.1| hypothetical protein APPUASWS_22358 [Arthrospira platensis str.
           Paraca]
          Length = 917

 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 18/245 (7%)

Query: 129 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           N G + +++ FY++A+ + P+    +   +G+  +  G +  A   +Q+A+ L+P+  EA
Sbjct: 84  NMGWFDEAISFYQQAIDLSPNW-ADLHYHLGMTWHWQGNIEGAIGCYQKAIALNPKLGEA 142

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
            + +A   L+ NE   I   ++ +Q      P      N L       G   L +   + 
Sbjct: 143 YLDMA---LRLNERGDINTAIKVLQEGRINCPNFKEIFNTL-------GYLQLQQNQIDE 192

Query: 249 ALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
           A+A+        PT+   Y NL  ++  +G   +A   Y    K I+   +    Y  LG
Sbjct: 193 AIAIFQEALSIDPTEPLVYNNLGWAFARQGKLSEAIAAYH---KAISLKPDLAIAYSNLG 249

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
           ++     + R A+T F+K + I PDN       G+  + +G + +A    +KA  IDP+ 
Sbjct: 250 KLWQHKNNHRQAITYFQKAIAIEPDNIMFYSDCGNSCLIIGCLSQAMACFQKAIAIDPKF 309

Query: 365 AQAFI 369
            Q +I
Sbjct: 310 VQGYI 314


>gi|20092504|ref|NP_618579.1| hypothetical protein MA3704 [Methanosarcina acetivorans C2A]
 gi|19917772|gb|AAM07059.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1004

 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 139/333 (41%), Gaps = 23/333 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + + KA   D    S    KG  L      E+A  AF+ VLE D ++  AL       
Sbjct: 50  ALEAFEKALAFDPDNVSARYFKGLTLGYLNLPERALEAFERVLEKDPEHSGALYYSGLAL 109

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G+++++      AL+++P  PGA     G   Y LG+  +A +AF+  L L+P +  
Sbjct: 110 NQLGKHTEAASALSGALEINPENPGAWYY-RGESLYILGKSAEALKAFEETLALEPSHAG 168

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A    A   L        R+ ++  ++A ++ P  A A           G+        E
Sbjct: 169 AWEGKAKAYLSLGRK---REALKASEKALKLKPSSAEAWETQGKIMESIGKKEEALGAFE 225

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKA------GLYYMASVKEINKPHEFIFPYY 301
            +L +    P  + +     +   S G YE+A       L+  +S+ E            
Sbjct: 226 RSLVLE---PMNAGNVMEKGKLLGSLGRYEEALEAFESSLWMDSSLSEAKIKR------- 275

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             G+  L LG+F+ AL +F K LE  P+N E     G  ++  G+  +A +   KA  I+
Sbjct: 276 --GKTLLALGNFQQALDSFRKNLEEDPENFENWGGTGSCFLAFGKYYEAMKAYEKALSIE 333

Query: 362 PRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 393
           P ++     +GE+     D   AL+AF+ A  L
Sbjct: 334 PENSCIMSGIGEIYYQLGDYSRALEAFEQALRL 366



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 138/320 (43%), Gaps = 45/320 (14%)

Query: 75  ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 134
           A  I+   P  W  +G+ L   G+  +A  AF+  L  +  +  A  G+A    + GR  
Sbjct: 125 ALEINPENPGAWYYRGESLYILGKSAEALKAFEETLALEPSHAGAWEGKAKAYLSLGRKR 184

Query: 135 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
           ++L+  ++AL++ PS   A     G     +G+  +A  AF+R+L L+P N     A  V
Sbjct: 185 EALKASEKALKLKPSSAEAWETQ-GKIMESIGKKEEALGAFERSLVLEPMN-----AGNV 238

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
           M     E   +   + + + A E +                           E++L + +
Sbjct: 239 M-----EKGKLLGSLGRYEEALEAF---------------------------ESSLWMDS 266

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
              + S +     ++  + G++++A   +  +++E   P  F   + G G   L  G + 
Sbjct: 267 ---SLSEAKIKRGKTLLALGNFQQALDSFRKNLEE--DPENFE-NWGGTGSCFLAFGKYY 320

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+  +EK L I P+N   +  +G IY QLG   +A E   +A ++D  +  A+   G +
Sbjct: 321 EAMKAYEKALSIEPENSCIMSGIGEIYYQLGDYSRALEAFEQALRLDIENGFAWNGKGNV 380

Query: 375 LIS-SDTGAALDAFKTARTL 393
           L        AL+A+++  TL
Sbjct: 381 LCKLGKYQEALEAYESLLTL 400



 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 41/185 (22%)

Query: 32  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 91
            +  E   I++ +G  Y  LG            +  A + + +A R+D+     W GKG 
Sbjct: 331 SIEPENSCIMSGIGEIYYQLG-----------DYSRALEAFEQALRLDIENGFAWNGKGN 379

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE------------- 138
           +L   G+ ++A  A++ +L  D +++PA        +NRG     L+             
Sbjct: 380 VLCKLGKYQEALEAYESLLTLDYESLPA-------RYNRGVALSKLKARQKEEEKTLENK 432

Query: 139 ---FYKRALQVHPSCPGAIRLGI------GLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
               +K+ L++    P   ++G       GL   +LG+  +A QAF RA +    +V  L
Sbjct: 433 LQAAFKKYLELSGKLP-EDKIGAEGWKYRGLAFAELGEYKEALQAFDRAARYSSGDVYPL 491

Query: 190 VALAV 194
             L +
Sbjct: 492 ACLGI 496



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 88  GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH 147
           GKG + +   E ++A  AF  VL  D  + PA + +A        +  ++E  +R +   
Sbjct: 591 GKGLVFVHCEEWKKALEAFDTVLIFDPKDTPAAVMKAFALIRFQEFGKAIEVLER-VTAE 649

Query: 148 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 207
             CP      +G    + G   +A +A+++A++ +P+N+ A   LA +  +   + G  K
Sbjct: 650 DKCPDLSSCLLGFACARQGDFDRALKAYRKAIEANPKNIHARNGLAEIYFRLGNSRGALK 709

Query: 208 GME 210
            +E
Sbjct: 710 ELE 712


>gi|411119879|ref|ZP_11392255.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710035|gb|EKQ67546.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 467

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 16/299 (5%)

Query: 76  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 135
           S    HEP  W  KG  L      E+A  +F   ++   D   AL  +    FN G Y  
Sbjct: 38  SSPTWHEP--WYFKGMALCELQRYEEAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDS 95

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALA 193
           ++  Y +A+++ P+   A     G    KLG    A +++ ++L+++P+  ++     + 
Sbjct: 96  AIASYDKAIKLRPTFHQAW-FNRGNALDKLGCYEAALESYDKSLEIEPDYSKSWYNRGIT 154

Query: 194 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
           +  L+  + A     +    +A E  P+ + A    AN      ++    +  E  L++ 
Sbjct: 155 LSKLERYDDA-----IASYDKAIEFRPHYSNAWYNRANILHRQKRYSEALESYERVLSIK 209

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
              P    ++YNL    H  G +E+A   Y  ++K + K   F   +Y  G     LG +
Sbjct: 210 ---PDWHGAWYNLGNILHKLGRHEEAVASYNRALKIVPK---FYGAWYNRGNALDALGRY 263

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             A+ ++ + LEI P+  E     G    +  + E+A     +A ++DP+ A+A+   G
Sbjct: 264 DEAIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFAKAWSSRG 322



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 129/311 (41%), Gaps = 32/311 (10%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y+K+  I+     +W  +G  L      + A +++   +E       A   +A + 
Sbjct: 130 ALESYDKSLEIEPDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYSNAWYNRANIL 189

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE--- 184
             + RYS++LE Y+R L + P   GA    +G   +KLG+  +A  ++ RAL++ P+   
Sbjct: 190 HRQKRYSEALESYERVLSIKPDWHGAW-YNLGNILHKLGRHEEAVASYNRALKIVPKFYG 248

Query: 185 ----NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
                  AL AL   D          + +E  +RA EI P        L   ++  G   
Sbjct: 249 AWYNRGNALDALGRYD----------EAIESYRRALEIKP-------NLREAWYNWGSTL 291

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD-YEKAGLYYMASV---KEINKPHEF 296
                 E A+A  +        +   A+++ S+G  + K G+Y  A +   K +    + 
Sbjct: 292 YKASRYEEAIASYDQAIRLDPKF---AKAWSSRGTAFRKLGMYAEAIISYDKAVQHQPDL 348

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
              +YG G     LG   +A+ +++  + I PD      + G     LG  + A     +
Sbjct: 349 YEAWYGRGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQ 408

Query: 357 AAKIDPRDAQA 367
           A +I+P   +A
Sbjct: 409 ALQINPNFPEA 419



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 26/304 (8%)

Query: 133 YSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           Y D++  ++RALQ  P+   P   + G+ LC  +L +  +A Q+F +A+ L  +  EAL 
Sbjct: 25  YEDAIMSFERALQSSPTWHEPWYFK-GMALC--ELQRYEEAVQSFNQAIDLRADYPEALN 81

Query: 191 A--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
           +  +A+ +L + ++A     +    +A ++ P    A     N     G +    +  + 
Sbjct: 82  SRGIALFNLGSYDSA-----IASYDKAIKLRPTFHQAWFNRGNALDKLGCYEAALESYDK 136

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
           +L +    P  S S+YN   +      Y+ A   Y  +++   +PH +   +Y    +  
Sbjct: 137 SLEIE---PDYSKSWYNRGITLSKLERYDDAIASYDKAIE--FRPH-YSNAWYNRANILH 190

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
           +   +  AL ++E+VL I PD       LG+I  +LG+ E+A     +A KI P+   A+
Sbjct: 191 RQKRYSEALESYERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRALKIVPKFYGAW 250

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSF 426
            + G  L       AL  +  A    ++A E  P   E   N G   ++   +E A  S+
Sbjct: 251 YNRGNAL------DALGRYDEAIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASY 304

Query: 427 KDAL 430
             A+
Sbjct: 305 DQAI 308


>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
 gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
          Length = 1056

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 157/370 (42%), Gaps = 16/370 (4%)

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           +E +  A   YN+A R+D    S  + +G    +KGE ++A + +  VL+ D  +V +  
Sbjct: 141 KEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQIDPRSVVSYN 200

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
            +      +G Y  ++  Y +AL + P    A+     + R K GQ   A + + +ALQL
Sbjct: 201 NRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIK-GQYDSAIENYNQALQL 259

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           +P++  A      +     E     + +     A +I P   +AL    + F   G +  
Sbjct: 260 NPKSKIAYNNRGFVFYNKGE---YDRAIADYNSALQIDPRYVVALVNRGDAFVSKGDYDR 316

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
                  AL +    P  + +Y     +  +KG+Y++A + Y  +++   K   ++F + 
Sbjct: 317 AIGDYGHALQIN---PNYAFAYNGRGVALQNKGEYDRAIMDYDQALRLDPK---YVFAFA 370

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             G      G+   A+ ++ + L + P+  +     G  +    Q  +A E   +  ++D
Sbjct: 371 NRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIEDYEQVIRLD 430

Query: 362 PRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
           PR   A+ + G  L+S  +   A+  +  A  L  K+       V  N G    +KGE++
Sbjct: 431 PRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSA-----TVYANRGRAFQDKGEYD 485

Query: 421 SAHQSFKDAL 430
            A   +  AL
Sbjct: 486 RAIADYDQAL 495



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 136/306 (44%), Gaps = 10/306 (3%)

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           LA   Y+KA  +D    + +  +G+    KGE ++A + +   L  +  +  AL  +A +
Sbjct: 452 LAIADYDKALLLDPKSATVYANRGRAFQDKGEYDRAIADYDQALRLNPKDAIALNNRADI 511

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
              R  +  ++  Y +ALQ++P   GA     GL     G+  +A   + +ALQL+P  +
Sbjct: 512 LRLRHEHDRAIASYDQALQLNPKYVGAYN-SRGLAFQDKGEYDRAIANYDQALQLNPRYI 570

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            A +       +  E A   + +    +A +I     +A N     F   G++       
Sbjct: 571 TAYINRGDAYRRKGEHA---RAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIIDY 627

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           + AL +    P  S  + N   ++H KG+Y++A   Y  +++    P      Y   G  
Sbjct: 628 DRALQID---PMYSTGFINRGFAFHKKGEYDRAIADYDRALQI--DPRSAT-AYNNRGFT 681

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
               G++  A+ +++K + I PD   +    G +    G +E++   L +A +++PR A+
Sbjct: 682 FQNRGEYDLAIVDYDKAILIKPDLANSYYHRGTVLRLKGDLERSVADLTEAIRLNPRYAE 741

Query: 367 AFIDLG 372
           A+ D G
Sbjct: 742 AYQDRG 747



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 137/348 (39%), Gaps = 26/348 (7%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G  L  +GE E+A + F + L  +   V A + +     N+G Y  ++  Y  ALQ+ P
Sbjct: 32  RGFELQNRGEHEKAIAEFNLALRLNPKLVSAYINRGFAFRNKGDYDRAIADYDHALQIDP 91

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
           +   A     G   Y  G+  +A   + R+++L  +         +      E     + 
Sbjct: 92  NSVVAFN-NRGDAFYHKGEYDRAIADYNRSIKLSSDKAAVYNNRGLAFFSKEE---YDRA 147

Query: 209 MEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH----GPTKSHSY 263
           +    +A  + P Y + ALN         G  F  +   + A+A  N      P    SY
Sbjct: 148 IADYNQALRLDPKYLSAALN--------RGDAFRSKGEYDRAIADYNQVLQIDPRSVVSY 199

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            N   ++  KG+Y++A   Y    + +     +       G V    G + SA+ N+ + 
Sbjct: 200 NNRGLAFQGKGEYDRAVADYN---QALTLDPGYTIALINRGDVFRIKGQYDSAIENYNQA 256

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGA 382
           L++ P +       G ++   G+ ++A      A +IDPR   A ++ G+  +S  D   
Sbjct: 257 LQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNRGDAFVSKGDYDR 316

Query: 383 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A+  +  A  +             N  GV    KGE++ A   +  AL
Sbjct: 317 AIGDYGHALQINPNYA-----FAYNGRGVALQNKGEYDRAIMDYDQAL 359


>gi|33864077|ref|NP_895637.1| hypothetical protein PMT1810 [Prochlorococcus marinus str. MIT
           9313]
 gi|33635661|emb|CAE21985.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
          Length = 691

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 163/358 (45%), Gaps = 36/358 (10%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL-EADRDNVPAL-LGQACVEFNRGRYSD 135
           ++  EP++    G +   +G ++QA    +  + E D   +P + LG   V    G++ +
Sbjct: 35  VNPKEPNSLHLLGCIYKDRGNLQQAFDLIQASIREDDSTPIPFINLGNILVMV--GQHEE 92

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
           +   ++++LQ +   P +     G    ++G + +A+QA++  LQL+  +  A   L   
Sbjct: 93  AARIFQQSLQRNQQIPES-WFCFGNALREIGNVQEAKQAYRNTLQLNAAHAGAASILGA- 150

Query: 196 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
            L A+E        EK+  + EI+     A     N     G+  L+E   E   A+  +
Sbjct: 151 -LLADE--------EKLDESEEIFSKAIEASPQDVNLRINYGK--LLEDKYEYNAALEQY 199

Query: 256 ------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIFPYYGLGQVQL 308
                  P     + N A +   +G  E+A    +AS +  I    +F   Y+GLG V  
Sbjct: 200 RFALLLAPESPELHLNFASALKKEGKVEEA----IASCRNAIELRPDFEAAYFGLGIVLK 255

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
           + G+F  A  ++ K +++ PD  +    LGH++   G+ E+A+   R A  + P  A A+
Sbjct: 256 ENGEFEEAKASYRKAIDLKPDFADAYLNLGHVFKDHGEAEEAKASYRTAIDLKPDFADAY 315

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 424
           ++LG +L   + G   +A  + R    KA E  P  ++   N+G +  ++GE E A Q
Sbjct: 316 LNLGNIL--KEEGDVEEAIASYR----KAIELKPDFVDAYLNLGTVLNDEGEVEEARQ 367



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/351 (20%), Positives = 145/351 (41%), Gaps = 42/351 (11%)

Query: 46  VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA 105
           + +  LG I     + EE    A + + ++ + +   P +W   G  L   G V++A  A
Sbjct: 75  IPFINLGNILVMVGQHEE----AARIFQQSLQRNQQIPESWFCFGNALREIGNVQEAKQA 130

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           ++  L+ +  +  A      +  +  +  +S E + +A++  P     +R+  G      
Sbjct: 131 YRNTLQLNAAHAGAASILGALLADEEKLDESEEIFSKAIEASPQDVN-LRINYGKLLEDK 189

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK------GMEKMQRAFEIY 219
            +   A + ++ AL L PE+ E         L  N A+ ++K       +   + A E+ 
Sbjct: 190 YEYNAALEQYRFALLLAPESPE---------LHLNFASALKKEGKVEEAIASCRNAIELR 240

Query: 220 P-----YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           P     Y  + +    N  F        E+   +     +  P  + +Y NL   +   G
Sbjct: 241 PDFEAAYFGLGIVLKENGEF--------EEAKASYRKAIDLKPDFADAYLNLGHVFKDHG 292

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           + E+A   Y  ++    KP +F   Y  LG +  + GD   A+ ++ K +E+ PD  +  
Sbjct: 293 EAEEAKASYRTAIDL--KP-DFADAYLNLGNILKEEGDVEEAIASYRKAIELKPDFVDAY 349

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 385
             LG +    G++E+A++++     ++       I+   LL++S +   LD
Sbjct: 350 LNLGTVLNDEGEVEEARQIVSALYNLN------VIEESSLLVTSSSNLVLD 394



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 70/344 (20%), Positives = 149/344 (43%), Gaps = 21/344 (6%)

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
             + + +  P + +S + L   Y  +G+ ++A     AS++E +       P+  LG + 
Sbjct: 28  ICIQILSVNPKEPNSLHLLGCIYKDRGNLQQAFDLIQASIREDDSTP---IPFINLGNIL 84

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
           + +G    A   F++ L+      E+    G+   ++G +++A++  R   +++   A A
Sbjct: 85  VMVGQHEEAARIFQQSLQRNQQIPESWFCFGNALREIGNVQEAKQAYRNTLQLNAAHAGA 144

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQS 425
              LG LL      A  +    +  +  KA E  P  + +  N G +  +K E+ +A + 
Sbjct: 145 ASILGALL------ADEEKLDESEEIFSKAIEASPQDVNLRINYGKLLEDKYEYNAALEQ 198

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
           ++ AL       LL  ++    ++ ++++   K+ ++     +  N +EL  +     F 
Sbjct: 199 YRFAL-------LLAPESPELHLNFASALK--KEGKVEEAIASCRNAIELRPDFEAAYFG 249

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 545
           L  +L++  +   A   YR  +    D+ DAYL L  + K     + +      A+ +  
Sbjct: 250 LGIVLKENGEFEEAKASYRKAIDLKPDFADAYLNLGHVFKDHGEAEEAKASYRTAIDLKP 309

Query: 546 KYPNALSMLGDLELKNDDWVKAKETFRAASD-ATDGKDSYATLS 588
            + +A   LG++  +  D  +A  ++R A +   D  D+Y  L 
Sbjct: 310 DFADAYLNLGNILKEEGDVEEAIASYRKAIELKPDFVDAYLNLG 353



 Score = 43.1 bits (100), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 125/322 (38%), Gaps = 62/322 (19%)

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           + NL       G +E+A   +  S++   +  E    ++  G    ++G+ + A   +  
Sbjct: 77  FINLGNILVMVGQHEEAARIFQQSLQRNQQIPE---SWFCFGNALREIGNVQEAKQAYRN 133

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS-DTG 381
            L++   +      LG +     ++++++E+  KA +  P+D    I+ G+LL    +  
Sbjct: 134 TLQLNAAHAGAASILGALLADEEKLDESEEIFSKAIEASPQDVNLRINYGKLLEDKYEYN 193

Query: 382 AALDAFKTARTL--------------LKKAG--EEVPIEVLNNI-------------GVI 412
           AAL+ ++ A  L              LKK G  EE      N I             G++
Sbjct: 194 AALEQYRFALLLAPESPELHLNFASALKKEGKVEEAIASCRNAIELRPDFEAAYFGLGIV 253

Query: 413 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG-- 470
             E GEFE A  S++ A+             K    DA         + L H F++ G  
Sbjct: 254 LKENGEFEEAKASYRKAI-----------DLKPDFADAY--------LNLGHVFKDHGEA 294

Query: 471 --------NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 522
                     ++L  +      NL  +L++  D   A   YR  +    D+VDAYL L  
Sbjct: 295 EEAKASYRTAIDLKPDFADAYLNLGNILKEEGDVEEAIASYRKAIELKPDFVDAYLNLGT 354

Query: 523 IAKARNNLQLSIELVNEALKVN 544
           +      ++ + ++V+    +N
Sbjct: 355 VLNDEGEVEEARQIVSALYNLN 376


>gi|183221520|ref|YP_001839516.1| hypothetical protein LEPBI_I2138 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
           (TPR) domains [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 700

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 175/404 (43%), Gaps = 45/404 (11%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y +LG I   QRE  +    A  Y+ +  R+   +   +   G + L K   E+A+  F+
Sbjct: 289 YGHLGTI-FYQREDYDR---AEYYFREVIRLKTGDAKAYYNLGLVYLKKKVPEEAAKYFQ 344

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             L+A+ +        A    + G+ + ++   K+AL + PS   ++   +    YK G+
Sbjct: 345 KALDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSL-FALAELYYKKGE 403

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
           L +A   F+R ++L P +  +  A   + +  +E     + +   + A  + P    A  
Sbjct: 404 LVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAFEGALSLNPKNQSAYY 463

Query: 228 YLANHFFFTGQHFL-VEQLTETALAVTNHGPTK--SHSYYNLARSYH-SKGDYEKAGLYY 283
            L   +   G+  + +E L ++     NH P++     YY   R Y+ +  +YE+A  + 
Sbjct: 464 NLGLSYLHAGKPTMAIESLRKSQALDPNHVPSRLAIADYYLENRFYNEAISEYEEAIAW- 522

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF---EKVLEIYPDNCETLK--ALG 338
                   KP         L + +LKL D      N+   EK+L    +N +  K   L 
Sbjct: 523 --------KPE--------LYEARLKLADVYIQTKNYQAAEKMLVYVLENAKDPKEIKLA 566

Query: 339 HIYVQL--------GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
           H  + L        G  +KA+E   +A  IDP D ++ + L ++LI  D+G+ +D  K  
Sbjct: 567 HRKLALSYASSGNVGSSKKAKEEAFRATHIDPEDMESRLVLSKILI--DSGSLVDREKAI 624

Query: 391 RTLLKKAGEEVPIEVL----NNIGVIHFEKGEFESAHQSFKDAL 430
             L      +V   +     N +GV +F+ GEF+ A  SF+ A+
Sbjct: 625 EELTVITRSDVTPTISSKAHNYLGVCYFKNGEFKRALSSFQTAI 668



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 137/327 (41%), Gaps = 22/327 (6%)

Query: 112 ADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKA 171
           +D D   AL     +    GRY +++E  ++A+Q       A    + L     G+  +A
Sbjct: 142 SDEDKSIALTVLGVMYDEAGRYINAIERLEKAIQYDSKNYFAF-YNLSLAFKHAGKFEEA 200

Query: 172 RQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIYPYCAMALNY 228
           R+A QRA ++ P +    VAL    LQ N   E    +  +E  +    + P   + L Y
Sbjct: 201 RRAAQRAKEIAPNDYR--VAL----LQGNLFQEIGDPQSAIEAYKEGQSLAP-SDVTLTY 253

Query: 229 -LANHFFFTGQHFLVEQLTE--TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
            LA  +   G   L E ++E    +    +  T   SY +L   ++ + DY++A  Y+  
Sbjct: 254 NLAISYLKQGN--LAEAISEFQKVVQTAPNSQTAVLSYGHLGTIFYQREDYDRAEYYFRE 311

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
            ++      +    YY LG V LK      A   F+K L+   +  E  + +   ++ +G
Sbjct: 312 VIRLKTGDAK---AYYNLGLVYLKKKVPEEAAKYFQKALDANANEPEVYRYIADAFLSMG 368

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIE 404
           Q   A   L+KA  + P D  +   L EL      G  ++A    R +++   G+     
Sbjct: 369 QTNMAITALKKALLLKPSDVDSLFALAELYYKK--GELVEAESLFRRIIRLTPGDTYSET 426

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDALG 431
              N+G+I  E   +  +  +F+ AL 
Sbjct: 427 AYVNLGIILDEMERYSESIAAFEGALS 453



 Score = 46.6 bits (109), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 16/280 (5%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G L    G+ + A  A+K        +V      A     +G  ++++  +++ +Q  P
Sbjct: 221 QGNLFQEIGDPQSAIEAYKEGQSLAPSDVTLTYNLAISYLKQGNLAEAISEFQKVVQTAP 280

Query: 149 SCPGAI-RLG-IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ---ANEAA 203
           +   A+   G +G   Y+     +A   F+  ++L   + +A   L ++ L+     EAA
Sbjct: 281 NSQTAVLSYGHLGTIFYQREDYDRAEYYFREVIRLKTGDAKAYYNLGLVYLKKKVPEEAA 340

Query: 204 G-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
              +K ++      E+Y        Y+A+ F   GQ  +     + AL +    P+   S
Sbjct: 341 KYFQKALDANANEPEVY-------RYIADAFLSMGQTNMAITALKKALLLK---PSDVDS 390

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
            + LA  Y+ KG+  +A   +   ++           Y  LG +  ++  +  ++  FE 
Sbjct: 391 LFALAELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAFEG 450

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            L + P N      LG  Y+  G+   A E LRK+  +DP
Sbjct: 451 ALSLNPKNQSAYYNLGLSYLHAGKPTMAIESLRKSQALDP 490


>gi|91772658|ref|YP_565350.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91711673|gb|ABE51600.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM 6242]
          Length = 1049

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 138/343 (40%), Gaps = 38/343 (11%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   Y KA  +D      W    Q +        A  A+  +L  D +N  ALL +    
Sbjct: 686  AINNYEKAVDLDSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPENKTALLQKGQAY 745

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
               G Y  SL  Y + L+V      A  L  GL  Y LG L  A  ++ + L  DP+N++
Sbjct: 746  DKIGIYRSSLASYNKLLKVDTDNTEAWYLR-GLASYNLGNLEDAVYSYDKVLSSDPQNID 804

Query: 188  ALVALA------------------VMDLQANEAAGIRK--------GMEK-MQRAFEIY- 219
             L+A +                  V++++ ++ + + K        G+ K     ++I  
Sbjct: 805  VLLAQSLVLEDLGLFEDSINNYDKVLEMKVDDPSVLMKKGNVYEKLGLYKDANDCYDIVL 864

Query: 220  ---PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
               P  ++AL+    + +  G +  +  + +  L +  + P  + ++YN     +    Y
Sbjct: 865  INEPANSLALSRKGFNLYMLGDY--IGAMDQYDLVIAKN-PYDAAAWYNKGNVAYLTSSY 921

Query: 277  EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
              +  +Y+ +V+   K    I  +Y LG +    GD  +A+T +EK L I P+    L  
Sbjct: 922  AGSTQFYLKAVELQPKS---ITAWYNLGYIANIRGDVDTAITYYEKALAIDPNAASALYN 978

Query: 337  LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
                + ++GQ   A+   +K   IDP    A  D G    + D
Sbjct: 979  KRFAHYRVGQSVSAETERKKLDVIDPEFIVALDDRGTKFFTPD 1021



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 137/575 (23%), Positives = 214/575 (37%), Gaps = 126/575 (21%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W  KG L L   + E+A  +F+ VLE D  +      +A      G Y++++  Y  AL+
Sbjct: 400 WYDKGTLYLGLSDYEEAVLSFEKVLELDSKHAVVWYKKALALDKLGNYNEAIICYTEALR 459

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEALVALAV----MDLQ 198
             PSCP    L      Y L   G+ ++A   +++ ++LDP+   A  AL +    MD  
Sbjct: 460 RDPSCPNVWYLK----GYDLDTTGRYKEAVSCYRKTVELDPQFTLAWYALGLDLAHMDEH 515

Query: 199 ANEAAG---------------IRKG--MEKM---QRAFEIYPYCAMALNY--LANHFFFT 236
           +   A                 RKG  ++K+   Q A E Y   A++L+    A  F   
Sbjct: 516 SEAIAAYDQVIEQNSDFSDAYYRKGRTLDKLGLYQDAIESYR-VAISLDSSNSAASFQME 574

Query: 237 GQHFLVEQLT-ETALAVTNHGPT----------KSHSYYNLA------------------ 267
                VE+L   +A+   N GP              S YN A                  
Sbjct: 575 ADISRVERLNHSSAIPSQNIGPIFDIFEIIKGMTGISDYNAAIMEQNNVDLIGVVPDGYD 634

Query: 268 ------RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
                  S   KG YE A L Y  ++  + KP+  +  +Y  GQ    LGD  SA+ N+E
Sbjct: 635 AWVAKGGSLFVKGSYENALLSYNKAI--MIKPNSSV-TWYMRGQTYEMLGDRSSAINNYE 691

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
           K +++     +   AL     +      A +       +DP +  A +  G+        
Sbjct: 692 KAVDLDSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPENKTALLQKGQ-------- 743

Query: 382 AALDAFKTARTLLKKAGEEVPIEVLNN-----IGVIHFEKGEFESAHQSFKDALGDGIWL 436
            A D     R+ L    + + ++  N       G+  +  G  E A  S+   L      
Sbjct: 744 -AYDKIGIYRSSLASYNKLLKVDTDNTEAWYLRGLASYNLGNLEDAVYSYDKVLSS---- 798

Query: 437 TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV-ELPWNKVTVLFNLARLLEQIHD 495
              D +    ++   A  L  +D+ LF    N+ + V E+  +  +VL     + E+   
Sbjct: 799 ---DPQNIDVLL---AQSLVLEDLGLFEDSINNYDKVLEMKVDDPSVLMKKGNVYEK--- 849

Query: 496 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
                      L  Y+D  D Y  +  I +  N+L LS +  N            L MLG
Sbjct: 850 -----------LGLYKDANDCY-DIVLINEPANSLALSRKGFN------------LYMLG 885

Query: 556 DLELKND--DWVKAKETFRAASDATDGKDSYATLS 588
           D     D  D V AK  + AA+    G  +Y T S
Sbjct: 886 DYIGAMDQYDLVIAKNPYDAAAWYNKGNVAYLTSS 920



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 83/411 (20%), Positives = 155/411 (37%), Gaps = 54/411 (13%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
           ++  + +K+E  I++   Y +   +D++    W   G  L   G   +A ++F+ VL  D
Sbjct: 270 LDYDKLDKKEDAIIS---YREVLVLDLYNAEAWFNLGVALEGTGNYFEAINSFEQVLLLD 326

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-IGLCRYKLGQLGKAR 172
            DN+ A   +  V    GR+ ++L  Y  AL+++P     I      +      Q  +  
Sbjct: 327 PDNIDAWHKKGLVLNKIGRFDEALVSYDSALKINPDNIAKIYTSNPAIASLNTSQFSECY 386

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAA--GIRKGMEKMQRAFEIYPYCAMALNYLA 230
            A   +   D   +        + L   E A     K +E   +   ++   A+AL+ L 
Sbjct: 387 AAIP-SFNSDSAKIWYDKGTLYLGLSDYEEAVLSFEKVLELDSKHAVVWYKKALALDKLG 445

Query: 231 NHFFFTGQHFLVEQLTETALAVTN---HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
           N+              E  +  T      P+  + +Y       + G Y++A   Y  +V
Sbjct: 446 NY-------------NEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYKEAVSCYRKTV 492

Query: 288 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 347
            E++   +F   +Y LG     + +   A+  +++V+E   D  +     G    +LG  
Sbjct: 493 -ELDP--QFTLAWYALGLDLAHMDEHSEAIAAYDQVIEQNSDFSDAYYRKGRTLDKLGLY 549

Query: 348 EKAQELLRKAAKIDPRDAQAFIDL------------GELLISSDTGAALDAFKTARTLLK 395
           + A E  R A  +D  ++ A   +               + S + G   D F+  + +  
Sbjct: 550 QDAIESYRVAISLDSSNSAASFQMEADISRVERLNHSSAIPSQNIGPIFDIFEIIKGMTG 609

Query: 396 KAGEEVPIEVLNN---IGVIH-------------FEKGEFESAHQSFKDAL 430
            +     I   NN   IGV+              F KG +E+A  S+  A+
Sbjct: 610 ISDYNAAIMEQNNVDLIGVVPDGYDAWVAKGGSLFVKGSYENALLSYNKAI 660


>gi|15613825|ref|NP_242128.1| hypothetical protein BH1262 [Bacillus halodurans C-125]
 gi|10173878|dbj|BAB04981.1| BH1262 [Bacillus halodurans C-125]
          Length = 214

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 4/160 (2%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           +EE++  A + +N A   +  +P  +V  G LL   GE+++A   F   +    D  PA 
Sbjct: 2   REENYEEAAKAFNAAIEANPSDPIGFVNFGNLLGMVGELDKALIFFDKAIGLQEDCAPAY 61

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
            G   + + + ++ D  + +K+A+  H      +   +G+C Y+LG L  A+  FQRAL+
Sbjct: 62  YGAGTIYYKQEKFEDGAKMFKQAI-AHKLNETDVYFMLGMCYYQLGALPHAQANFQRALE 120

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
           LD  +VEA   L +   Q  +   + + ++ +Q   E  P
Sbjct: 121 LDSNDVEARFQLGLCLAQLEQ---VDEAIKHLQLVVEHVP 157



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 11/176 (6%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P+    + N        G+ +KA +++    K I    +    YYG G +  K   F   
Sbjct: 21  PSDPIGFVNFGNLLGMVGELDKALIFF---DKAIGLQEDCAPAYYGAGTIYYKQEKFEDG 77

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              F++ +    +  +    LG  Y QLG +  AQ   ++A ++D  D +A   LG  L 
Sbjct: 78  AKMFKQAIAHKLNETDVYFMLGMCYYQLGALPHAQANFQRALELDSNDVEARFQLGLCL- 136

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                A L+    A   L+   E VP   +   N+GV +  K   E A   F+ A+
Sbjct: 137 -----AQLEQVDEAIKHLQLVVEHVPNHADAHFNLGVAYAYKDRLEEALAHFERAI 187


>gi|403367671|gb|EJY83659.1| TPR Domain containing protein [Oxytricha trifallax]
          Length = 1407

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 12/288 (4%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            + +Y  KA  ++ + P   V  G LL   G  ++A    K  L  +   + AL+G     
Sbjct: 1131 SAEYLKKALTVNKYYPLALVSMGNLLFETGHADEAIKYHKQALVINEKELQALIGLGNAF 1190

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            ++  +  +++ +YKRAL +       +   +G   Y +  + +A   ++ A+ L+P+  E
Sbjct: 1191 YDSSQPMEAINYYKRALAIDDQLSD-VHYNLGNALYLVENIDEAVMHYREAINLNPKKAE 1249

Query: 188  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
            +   L       NE       +   Q+A E+ P  A AL  L N ++   Q     ++  
Sbjct: 1250 SYYNLGNALCVKNEYPN---AVNAYQQALELDPKNAPALYNLGNAYYMLNQFTDAIKVYL 1306

Query: 248  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQV 306
             AL +       +  ++NLA +Y+   +Y+ A ++Y  +V+ + N    F+     LG V
Sbjct: 1307 RALDINEES---AECHFNLASAYNDVQNYQGAIIHYKRAVELDENNTDAFV----CLGGV 1359

Query: 307  QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
               + DF  A   +  VL+   DN + ++AL  +     Q   +++LL
Sbjct: 1360 FESVKDFDKAERYYRLVLQREKDNIKAIEALKKLKAGQQQQTSSKQLL 1407



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 45/306 (14%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS-SAFKIVLEADRDNVPALLGQACV 126
            A +Y+  A RID    +   G  + L    E + A    F++VL+ D  +  A      +
Sbjct: 1062 AAKYFKHAIRIDNDSVNARFGLAKTLQQFSENKDAPIEHFEMVLQKDTSHFKAATQLGIL 1121

Query: 127  EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
              +R  Y  S E+ K+AL V+   P A+ + +G   ++ G   +A +  ++AL ++ + +
Sbjct: 1122 YLDREEYEKSAEYLKKALTVNKYYPLAL-VSMGNLLFETGHADEAIKYHKQALVINEKEL 1180

Query: 187  EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
            +AL+ L                                      N F+ + Q        
Sbjct: 1181 QALIGLG-------------------------------------NAFYDSSQPMEAINYY 1203

Query: 247  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
            + ALA+ +     S  +YNL  + +   + ++A ++Y  ++    K  E    YY LG  
Sbjct: 1204 KRALAIDDQL---SDVHYNLGNALYLVENIDEAVMHYREAINLNPKKAE---SYYNLGNA 1257

Query: 307  QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
                 ++ +A+  +++ LE+ P N   L  LG+ Y  L Q   A ++  +A  I+   A+
Sbjct: 1258 LCVKNEYPNAVNAYQQALELDPKNAPALYNLGNAYYMLNQFTDAIKVYLRALDINEESAE 1317

Query: 367  AFIDLG 372
               +L 
Sbjct: 1318 CHFNLA 1323



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 137/353 (38%), Gaps = 47/353 (13%)

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLE-FYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
           ++D + V  L  QA V   + +  +  E  Y++ L+V P    A+   I  C  K   LG
Sbjct: 13  QSDPNYVEELFQQADVLLFKNKNCNEAERLYQQILEVDPRNIDALN-SISYC-IKFRVLG 70

Query: 170 ---------KARQ----------AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 210
                      RQ           +Q+ L+LDP+N+E    + VM LQ  +   ++  + 
Sbjct: 71  FENEHIQNLNERQQISLYELLSPIYQQILRLDPDNIECNFNMGVMYLQ--QKQDLQGALG 128

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
             QRA          +  + N      +  + +Q  E       + P      YNL   Y
Sbjct: 129 WFQRALRRDKIIRENIKKITN----PSELAVYQQYLEL------NRPHVIKILYNLGMIY 178

Query: 271 HSKGDYEKAGLYY---MASVKEINKPHEFIFPYYGLGQVQL-----KLGDFRSALTNFEK 322
              GD  +A  YY   +A  KE N        YY            K+G  + A+    +
Sbjct: 179 DRLGDISRASNYYRYAIAKCKEDNSLQSMHQSYYAKACTNYAVSLEKMGKRQEAIDLLNQ 238

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-- 380
           + E + +    L  LG I  + G +++AQ+    A KID        ++G    S     
Sbjct: 239 LKEEFREEIRVLNNLGIISKRHGLMQEAQQAYEDAIKIDENCFFPNYNMGVFKASHPNHE 298

Query: 381 --GAALDAFKTARTLLKKAGEEV-PIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               AL  F+ A  L +   E+V  I VL N+ ++H  + +   A Q  +DAL
Sbjct: 299 SDQEALKHFQKALDLARINKEDVYEINVLVNMALVHERQSQINEAIQCLQDAL 351



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 113/274 (41%), Gaps = 23/274 (8%)

Query: 106  FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
            +K  L  D  +  + +  A +  N G    + +++K A+++      A R G+      L
Sbjct: 1032 YKKCLTLDNKHFGSCIHLANLLANIGEGQRAAKYFKHAIRIDNDSVNA-RFGLAKT---L 1087

Query: 166  GQLGKARQA----FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
             Q  + + A    F+  LQ D  + +A   L ++ L   E     K  E +++A  +  Y
Sbjct: 1088 QQFSENKDAPIEHFEMVLQKDTSHFKAATQLGILYLDREE---YEKSAEYLKKALTVNKY 1144

Query: 222  CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
              +AL  + N  F TG      +  + AL +      +  +   L  +++      +A  
Sbjct: 1145 YPLALVSMGNLLFETGHADEAIKYHKQALVI---NEKELQALIGLGNAFYDSSQPMEAIN 1201

Query: 282  YY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
            YY   +A   +++  H      Y LG     + +   A+ ++ + + + P   E+   LG
Sbjct: 1202 YYKRALAIDDQLSDVH------YNLGNALYLVENIDEAVMHYREAINLNPKKAESYYNLG 1255

Query: 339  HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
            +      +   A    ++A ++DP++A A  +LG
Sbjct: 1256 NALCVKNEYPNAVNAYQQALELDPKNAPALYNLG 1289



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 69/348 (19%), Positives = 149/348 (42%), Gaps = 51/348 (14%)

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
            +G+   + +R +  ++LE++++A   + P     I + I  C  KL    ++ + +Q+AL
Sbjct: 805  IGETLYKMDRNQ--EALEYFRKASDFIKPEEDYLISMFIAKCLDKLKLYARSIEEYQKAL 862

Query: 180  QLDPE------------NVEALVALAVM--------DLQANEAAG-------IRKGMEKM 212
            QL  E            N+   +  A++        D   N+ +        I  G+E +
Sbjct: 863  QLYQEQQDEPLENSLLGNIHFRLGWAIIRNNNSLSSDKNKNDQSNPNIIENSIDMGIEHL 922

Query: 213  QRAFEIYPYCAMALNYLANHFFF---TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
            + A E+    A  ++ LA   F      +  L  Q+ E  L +    P+    +  + + 
Sbjct: 923  RTANELILNNADIMHKLAGVLFKEKDESEESL--QIMEKVLKII---PSNPEVHLLMGKI 977

Query: 270  YHSKGDYEKAGLYYMASVKEI-----NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
            Y  K ++ KA      ++K+      N+P +    ++ L Q   K  D++  + N++K L
Sbjct: 978  YDKKNNHLKAIESISQAIKQFATQNPNQPPKSNL-FFLLAQSLEKQKDYKKCILNYKKCL 1036

Query: 325  EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL--ISSDTGA 382
             +   +  +   L ++   +G+ ++A +  + A +ID     A   L + L   S +  A
Sbjct: 1037 TLDNKHFGSCIHLANLLANIGEGQRAAKYFKHAIRIDNDSVNARFGLAKTLQQFSENKDA 1096

Query: 383  ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             ++ F+    +L+K       +    +G+++ ++ E+E + +  K AL
Sbjct: 1097 PIEHFE---MVLQKDTSH--FKAATQLGILYLDREEYEKSAEYLKKAL 1139


>gi|432331042|ref|YP_007249185.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
 gi|432137751|gb|AGB02678.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
          Length = 4078

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 173/426 (40%), Gaps = 80/426 (18%)

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL--GQACVEFNRGRYSDSLEFYKR 142
            TW+ KG  L ++   ++A  A+   LE +     A +  G A ++ N+    D++  Y R
Sbjct: 994  TWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNK--VQDAVGAYSR 1051

Query: 143  ALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQA 199
            AL+++P+ C   +R G  L   +LG+   A  A+ ++L++DP+N    +    A  DL  
Sbjct: 1052 ALEINPALCDIWMRKGDAL--QQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKAFFDLTR 1109

Query: 200  NEAA--GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
             + A       +   QR+ E + Y  +AL  +  H    G   + E L E       +G 
Sbjct: 1110 YQDAIDAFDNAISLNQRSIEAFWYKGLALEKVNRH---EGAIHVFEILLEID---PKNGD 1163

Query: 258  TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
             + H    LA                                          LGD R A+
Sbjct: 1164 AQFHKGLALA-----------------------------------------VLGDHRDAI 1182

Query: 318  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLI 376
             +F+K L+I PD+       G   +++G+   A   L++A +I+    +AF  LG  LL 
Sbjct: 1183 GSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEAFYYLGYALLK 1242

Query: 377  SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL----GD 432
            + D   A++AF      L + G   P     N G+   +   FE A +SF  +L    G+
Sbjct: 1243 TGDYTGAIEAFDRN---LTRDGSNAPGHF--NRGIALEKSRRFEEALESFDKSLIYDPGN 1297

Query: 433  GIWLTLLDSKTKTYV---IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL 489
             +       K K Y      A A+    K +QL  R+ +    + +        +NL + 
Sbjct: 1298 ALAFY---HKGKVYADLGRHADAAFAFDKTLQLKPRYTDARLRMGI------AEYNLGKF 1348

Query: 490  LEQIHD 495
            +E IHD
Sbjct: 1349 IESIHD 1354



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 26/324 (8%)

Query: 65  FILATQYYNK-----ASRIDMHEPS---TWVGKGQLLLAKGEVEQASSAFK--IVLEADR 114
           FIL+ Q  N+     A +    EP     W  +G  L   G  ++A  A +    +  D 
Sbjct: 218 FILSKQDQNEFAAQSAEKFLAQEPDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDL 277

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
            +    LG A VE  +  + D++E + R L++HP   GA+    GL  Y+L Q  +A Q 
Sbjct: 278 SDAWYYLGLAGVETRQ--FDDAVEAFTRNLEIHPGNAGAL-FHRGLAHYRLKQYREAVQD 334

Query: 175 FQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 232
           F   L+ +P N EA     +A ++L   E A     +E   R   +    A +L +    
Sbjct: 335 FDSTLEPEPGNKEAWYRRGIACVNLSRYEEA-----LESFNRRLGLGQNHAGSLYFRGIA 389

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
               G++   ++  E+  A     P+ + + +    +Y S G + +A   Y  +++    
Sbjct: 390 QARLGRN---KEAIESFDAALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINPG 446

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
             + I   Y  G    KLG    A+  FE+ +   P N +     G   V++G+ ++A E
Sbjct: 447 LSDAI---YHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIE 503

Query: 353 LLRKAAKIDPRDAQAFIDLGELLI 376
              ++  + P  AQA  D G  LI
Sbjct: 504 AFDESLALKPGFAQAAFDKGAALI 527



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 13/288 (4%)

Query: 89   KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
            KG+ L+A G    A++AF   ++ +     AL G+   E  +G Y  ++    RAL++ P
Sbjct: 3786 KGRALIALGNHAGATAAFDRAIDINPSCWQALAGKGRAETYQGNYDGAITALDRALEIMP 3845

Query: 149  SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP-ENVEALVALAVMDLQANEAAGIRK 207
                 +    GL    L Q   A Q++ RAL+++P   V A   +A+ +L        R 
Sbjct: 3846 K-KAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPRVFAHKGIALAELGM-----YRD 3899

Query: 208  GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
             +E   +A E     A A     N  +  G++   E+  E  LA+    P  + ++    
Sbjct: 3900 AIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALD---PENAEAWTRQG 3956

Query: 268  RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
                ++  +E+A  +Y  ++  +  P  F   Y+  G   + +  ++ A+  F+ +L I 
Sbjct: 3957 MVLSAQQKFEEALEHYDRAL--MIDP-TFSIAYFTRGSALIAMKRYQEAVEAFDAMLHIQ 4013

Query: 328  PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            PD  +     G    +L   + A  + ++A +IDP   + + D+G++L
Sbjct: 4014 PDFVDAYIHKGRALQELELYQDALAVFKRALEIDPTRKECWNDIGDIL 4061



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 117/557 (21%), Positives = 215/557 (38%), Gaps = 82/557 (14%)

Query: 63   EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
            E +  A Q ++ A +I  +    W GKG  L A G  + A S F   L  D  +  A   
Sbjct: 3488 EQYDEAIQAFDLALKIRPNHAHLWTGKGIALSALGRDQDAVSFFTKALGIDSRDARAAYQ 3547

Query: 123  QACVEFNRGRYSDSLEFYKRALQVHPSCPGA--------IRLGI---------------- 158
                     +Y +++ + + AL   P+C  A          LG+                
Sbjct: 3548 LGVSYLKLSKYHEAIRYLEGALAQQPACVEANYQKGRALAMLGMHNDAITAYDKAIAGKE 3607

Query: 159  ---------GLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRK 207
                     G+ +  L Q  +A   +  AL L P+   A +   +A++ L  ++ A    
Sbjct: 3608 NFAEAWLYRGISQASLDQYDRAILDYDHALGLRPDYAPAHLFRGIALIHLSRHDQA---- 3663

Query: 208  GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
             +E    A  + P    AL       F+ G   L ++L   A+ V +     ++ Y   A
Sbjct: 3664 -VEAFNHALTVEPEYPEAL-------FYKGLALLEQELYTEAIPVFDQALAANNRY---A 3712

Query: 268  RSYHSKG-------DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
             ++H+KG        +E+A   + A++   +   E +F     G+  +  G FR A+ +F
Sbjct: 3713 EAWHNKGVALARTGQHEEAIAAFNAALGIRSDYAEALFER---GRSLVHTGMFREAIASF 3769

Query: 321  EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
            ++VL + P N       G   + LG    A     +A  I+P   QA    G        
Sbjct: 3770 DQVLILAPGNANAHFEKGRALIALGNHAGATAAFDRAIDINPSCWQALAGKGRAETYQGN 3829

Query: 381  GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD 440
                  +  A T L +A     +E++    ++H +KG   +A + ++DA+        ++
Sbjct: 3830 ------YDGAITALDRA-----LEIMPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIE 3878

Query: 441  SKTKTYVID--ASASMLQFKD-MQLFHR-FENDGNHVELPWNKVTVLFNLARLLEQIHDT 496
               + +     A A +  ++D ++ F +  E+DGN  E    K  V ++L +  +     
Sbjct: 3879 PLPRVFAHKGIALAELGMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYAD----- 3933

Query: 497  VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 556
              A   Y   L    +  +A+ R   +  A+   + ++E  + AL ++  +  A    G 
Sbjct: 3934 --AEKAYERGLALDPENAEAWTRQGMVLSAQQKFEEALEHYDRALMIDPTFSIAYFTRGS 3991

Query: 557  LELKNDDWVKAKETFRA 573
              +    + +A E F A
Sbjct: 3992 ALIAMKRYQEAVEAFDA 4008



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 123/309 (39%), Gaps = 18/309 (5%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   Y++A  I+      W+ KG  L   G+ E A  A+   L+ D DN P  + Q    
Sbjct: 1045 AVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKAF 1104

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            F+  RY D+++ +  A+ ++     A     GL   K+ +   A   F+  L++DP+N +
Sbjct: 1105 FDLTRYQDAIDAFDNAISLNQRSIEAFWYK-GLALEKVNRHEGAIHVFEILLEIDPKNGD 1163

Query: 188  AL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
            A     +ALAV+          R  +    +  +I P  A A           G++    
Sbjct: 1164 AQFHKGLALAVLGDH-------RDAIGSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAI 1216

Query: 244  QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
               + A+ +     + + ++Y L  +    GDY  A     A  + + +       ++  
Sbjct: 1217 VALKRAIEIET---SYTEAFYYLGYALLKTGDYTGA---IEAFDRNLTRDGSNAPGHFNR 1270

Query: 304  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
            G    K   F  AL +F+K L   P N       G +Y  LG+   A     K  ++ PR
Sbjct: 1271 GIALEKSRRFEEALESFDKSLIYDPGNALAFYHKGKVYADLGRHADAAFAFDKTLQLKPR 1330

Query: 364  DAQAFIDLG 372
               A + +G
Sbjct: 1331 YTDARLRMG 1339



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 122/322 (37%), Gaps = 50/322 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+ A  I+  +P+ W  K   L   G+ E+A  A   +L    DN  A + +    
Sbjct: 59  AIAAYDMAVSIEPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNAEAWILKGIAL 118

Query: 128 FNRGRYSDSLEFYKRALQVHPS-------------------------------CPGAIR- 155
           +  GR++D++  Y  AL + P                                 PG  R 
Sbjct: 119 YELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYARA 178

Query: 156 -LGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGME 210
               G+  Y+LG L  A  AF RA +LDP+++         L+  D     A    K + 
Sbjct: 179 YYNKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLA 238

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
           +     +I+    M+L  L  +          ++  +     T   P  S ++Y L  + 
Sbjct: 239 QEPDHADIWAIRGMSLFKLGRY----------DEALDALRQATAINPDLSDAWYYLGLAG 288

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
                ++ A   +  ++ EI+  +     + GL   +LK   +R A+ +F+  LE  P N
Sbjct: 289 VETRQFDDAVEAFTRNL-EIHPGNAGALFHRGLAHYRLK--QYREAVQDFDSTLEPEPGN 345

Query: 331 CETLKALGHIYVQLGQIEKAQE 352
            E     G   V L + E+A E
Sbjct: 346 KEAWYRRGIACVNLSRYEEALE 367



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 140/371 (37%), Gaps = 53/371 (14%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A   Y++A  +   +P     KG  L  +   ++A  AF+  L  + +N           
Sbjct: 773  AVVSYDQALELSPDDPKILYQKGMALTQRERFDEAIRAFESALALEPENASGAYYLGVAY 832

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 186
              R RY D++  +  A+ + P+   A    GI L + +  +  +A  AF  AL+ DP+N 
Sbjct: 833  AGRERYDDAIRAFDNAIALDPTQGQAFHFKGIALVQRE--RYTEAITAFLSALKRDPDNP 890

Query: 187  EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
                 L +  LQ  +    +  + +  RA E+ P    A  Y        G+H     L 
Sbjct: 891  VTHYYLGLAYLQDKQ---FKNAIPEFSRATELDPSLLDAYLYHGIALAAIGRHDEAVPLF 947

Query: 247  ETALAVTNHGPTKSHSYYNLARS---------------------------YHSKGDYEKA 279
            + +LA     PT   +    ARS                           +  KGD   +
Sbjct: 948  DKSLA---GNPTHIDAMTARARSLMVLERFSEVVETDDRILSLNPTLIDTWMQKGDALAS 1004

Query: 280  GLYYMASVKEINKPHE----FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
             L    ++   +K  E    F   +   G   + L   + A+  + + LEI P  C+   
Sbjct: 1005 QLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNKVQDAVGAYSRALEINPALCDIWM 1064

Query: 336  ALGHIYVQLGQIEKAQELLRKAAKIDP-------RDAQAFIDLGELLISSDTGAALDAFK 388
              G    QLG+ E A     K+ KIDP       R  +AF DL      +    A+DAF 
Sbjct: 1065 RKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKAFFDL------TRYQDAIDAFD 1118

Query: 389  TARTLLKKAGE 399
             A +L +++ E
Sbjct: 1119 NAISLNQRSIE 1129



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 128/310 (41%), Gaps = 28/310 (9%)

Query: 72   YNKASRID-MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 130
            YN+A  +  MH PS    KG  L+     E+A   F   LE D     A+  +       
Sbjct: 3225 YNRALALQPMHVPSLHR-KGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALSAL 3283

Query: 131  GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL- 189
            G Y ++++ Y + L +  +    +    G+    LG+   A  AF +AL LDP N +A  
Sbjct: 3284 GMYREAVKTYDKLLGID-AGNAEVSYDKGIALAHLGRHDDAIVAFNKALDLDPGNAQAAY 3342

Query: 190  ---VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
               ++LA      +      + +E+   + E + +  ++L       F  G++    +  
Sbjct: 3343 HKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSL-------FALGKYNDAVESY 3395

Query: 247  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYYG 302
              A+A+    P+ + ++Y    +  + G YE A       ++  NK  EF    +  Y  
Sbjct: 3396 VRAIAID---PSNAEAWYFKGSAIFASGGYEDA-------IEAFNKALEFRPDYVSAYND 3445

Query: 303  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
             G+    +G FR A+  F+  L +   N + L   G   ++L Q ++A +    A KI P
Sbjct: 3446 KGRSLFHMGMFREAVIAFDNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFDLALKIRP 3505

Query: 363  RDAQAFIDLG 372
              A  +   G
Sbjct: 3506 NHAHLWTGKG 3515



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 121/317 (38%), Gaps = 11/317 (3%)

Query: 61   KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            ++E +  A   +++A   +      W  KG  L   G+ E+A +AF   L    D   AL
Sbjct: 3690 EQELYTEAIPVFDQALAANNRYAEAWHNKGVALARTGQHEEAIAAFNAALGIRSDYAEAL 3749

Query: 121  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
              +     + G + +++  + + L + P    A     G     LG    A  AF RA+ 
Sbjct: 3750 FERGRSLVHTGMFREAIASFDQVLILAPGNANA-HFEKGRALIALGNHAGATAAFDRAID 3808

Query: 181  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            ++P   +AL      +       G    +  + RA EI P  A+  +     +    Q+ 
Sbjct: 3809 INPSCWQALAGKGRAETYQGNYDG---AITALDRALEIMPKKAILHDQKGLAYAALEQYR 3865

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
               Q  + AL +       +H    LA      G Y  A     A  K I         +
Sbjct: 3866 DAVQSYDRALEIEPLPRVFAHKGIALAE----LGMYRDA---IEAFDKAIEHDGNLAEAW 3918

Query: 301  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
             G G VQ  LG +  A   +E+ L + P+N E     G +     + E+A E   +A  I
Sbjct: 3919 MGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVLSAQQKFEEALEHYDRALMI 3978

Query: 361  DPRDAQAFIDLGELLIS 377
            DP  + A+   G  LI+
Sbjct: 3979 DPTFSIAYFTRGSALIA 3995



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 161/377 (42%), Gaps = 24/377 (6%)

Query: 63   EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
            E F  A   ++ A  ID  +      KG  L A G  ++A +AF   L  D DN  AL  
Sbjct: 1652 ESFEDAIGAFDAALAIDAQKTEYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYH 1711

Query: 123  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
            +       GR+S+++E   + ++ +P    A  L  G C + + +   A  ++ +AL+L+
Sbjct: 1712 KGLSLAELGRFSEAIEDLAKTVERNPKIANAW-LIQGFCLFAVERYSDALASYDKALELE 1770

Query: 183  PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
             +N           ++L  +  A +       ++A +I P    A  Y+    F   +  
Sbjct: 1771 TQNPHTWFYKGRTCLNLGNDSDAVL-----AFEQAIKIVPDFGEAFYYMGQALFRQKK-- 1823

Query: 241  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI--NKPHEFIF 298
             + +            P  + ++    R++ + G Y +A     A+ +++   +P + + 
Sbjct: 1824 -LAEAAVAFEEANRLMPDFTEAFQEKGRTFFALGRYREAA----AAFEQVLAMQPRD-LN 1877

Query: 299  PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
              YGL +   +LG  + A+  + KV  I PD        G  ++Q+ + E A     +  
Sbjct: 1878 ATYGLARSLDRLGSAKEAIPAYAKVNRIAPDCERAFLYRGFAHLQVREYEDAVAAFTRVV 1937

Query: 359  KIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
            +I+P +  A+ + G+ L+  +  A AL+AF     L +K  + V   +L   G+   +  
Sbjct: 1938 EINPANTDAWHEKGKALVVLEKYAKALEAFDG--YLGQKPDDPV---ILCQKGLSLVKLD 1992

Query: 418  EFESAHQSFKDALGDGI 434
             FE A  +F  A+  G+
Sbjct: 1993 RFEDALAAFTSAIDKGM 2009



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 17/180 (9%)

Query: 25   EIDEYYADVRYERIAILNALGVY------YTYLGKIETKQREKEEHFILATQY------- 71
            EID   AD  Y++   L+ALG+Y      Y  L  I+    E      +A  +       
Sbjct: 3264 EIDPACADAIYDKGRALSALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDA 3323

Query: 72   ---YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 128
               +NKA  +D         KG  L   G    A  AF  V+E +  +V   + +    F
Sbjct: 3324 IVAFNKALDLDPGNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLF 3383

Query: 129  NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
              G+Y+D++E Y RA+ + PS   A     G   +  G    A +AF +AL+  P+ V A
Sbjct: 3384 ALGKYNDAVESYVRAIAIDPSNAEAWYFK-GSAIFASGGYEDAIEAFNKALEFRPDYVSA 3442



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 124/313 (39%), Gaps = 50/313 (15%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           E F  A   + +A+ ID     +   +G  L       +A  AF  VL    +N  A   
Sbjct: 564 ERFSDAITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYE 623

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           +    F+  RY+++++ +  AL+ +P+   G + +GI L    +G L +A  AF +A+ L
Sbjct: 624 KGIALFHLLRYAEAVQEFHEALEQNPALVNGWLYMGISLAH--IGHLEEALPAFNKAIAL 681

Query: 182 DPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           +P+  EA V   + +  L+ +E A         + A ++Y +C   L   A         
Sbjct: 682 NPKLAEAYVRKGIVLFTLERHEEAVSTLNRALDENAKDVYGWCYKGLALSA--------- 732

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
                                     L R   +   ++KA         EIN+     F 
Sbjct: 733 --------------------------LGRFDEAVRSFDKA--------LEINRRCARAF- 757

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
            +  G   LKLG    A+ ++++ LE+ PD+ + L   G    Q  + ++A      A  
Sbjct: 758 -FERGNALLKLGKPLEAVVSYDQALELSPDDPKILYQKGMALTQRERFDEAIRAFESALA 816

Query: 360 IDPRDAQAFIDLG 372
           ++P +A     LG
Sbjct: 817 LEPENASGAYYLG 829



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 167/454 (36%), Gaps = 80/454 (17%)

Query: 89   KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
            KG  L   G   +A       +E +     A L Q    F   RYSD+L  Y +AL++  
Sbjct: 1712 KGLSLAELGRFSEAIEDLAKTVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELET 1771

Query: 149  SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
              P         C   LG    A  AF++A+++ P+  EA   +     +  + A     
Sbjct: 1772 QNPHTWFYKGRTC-LNLGNDSDAVLAFEQAIKIVPDFGEAFYYMGQALFRQKKLAEAAVA 1830

Query: 209  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
             E+  R   + P    A       FF  G++       E  LA+    P   ++ Y LAR
Sbjct: 1831 FEEANR---LMPDFTEAFQEKGRTFFALGRYREAAAAFEQVLAMQ---PRDLNATYGLAR 1884

Query: 269  SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            S    G  ++A   Y A V  I    E  F Y G   +Q++  ++  A+  F +V+EI P
Sbjct: 1885 SLDRLGSAKEAIPAY-AKVNRIAPDCERAFLYRGFAHLQVR--EYEDAVAAFTRVVEINP 1941

Query: 329  DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD------------------------ 364
             N +     G   V L +  KA E         P D                        
Sbjct: 1942 ANTDAWHEKGKALVVLEKYAKALEAFDGYLGQKPDDPVILCQKGLSLVKLDRFEDALAAF 2001

Query: 365  -----------------AQAFIDLG---ELLISSDTGAALDAFKTARTLLKKAGEEVPIE 404
                             A  F+ LG   E++ S+D   ALD+ +T R LL K GE +   
Sbjct: 2002 TSAIDKGMNTPGVHTEQALCFLKLGRDEEVIRSADRALALDSSET-RALLAK-GESLA-- 2057

Query: 405  VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ---FKD-- 459
                        G  E A  +F     DG+     D++          S++Q   ++D  
Sbjct: 2058 ----------RLGRHEEAVAAF-----DGV--IARDAENDRARRGRGVSLVQLGRYEDAV 2100

Query: 460  MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 493
            ++L H  END  + +L   K   L+ LAR  E +
Sbjct: 2101 IELDHALENDATNADLLTCKGYSLYRLARYKETV 2134



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 137/369 (37%), Gaps = 60/369 (16%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A + ++KA  ++  +P  W  K   L   G  E+A  AF  VL    D+  A LG+    
Sbjct: 3017 AVRSFDKALALNETDPDIWYHKAISLAHLGRAEEAVPAFDKVLGLRPDDAEAFLGRGRAY 3076

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            +    +  ++E + R +   P    A     G+  Y LG+  +A  AF + L+ D  N +
Sbjct: 3077 YTLKSFDRAIESFDRVIGYLPQHAAAWHEK-GMALYDLGRYEEAIAAFDKTLEEDGGNHD 3135

Query: 188  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
            AL   A+        A I K  E ++ +FE+                      L+ +  +
Sbjct: 3136 ALYYCALA------YAAIGKDAEAVE-SFEL----------------------LLTRAPD 3166

Query: 248  TALAVTNHGPTKSH------SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
             A A   +G   S       + +   ++   + DY  A      S   +  P E I  Y 
Sbjct: 3167 NATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDAHEVRARSFDSLGDPKETIDAY- 3225

Query: 302  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
                                + L + P +  +L   G   ++L + E+A ++  +A +ID
Sbjct: 3226 -------------------NRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEID 3266

Query: 362  PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
            P  A A  D G  L  S  G   +A KT   LL        +     I + H   G  + 
Sbjct: 3267 PACADAIYDKGRAL--SALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHL--GRHDD 3322

Query: 422  AHQSFKDAL 430
            A  +F  AL
Sbjct: 3323 AIVAFNKAL 3331



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 54/226 (23%)

Query: 131  GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
            G Y D++E + +A++ H        +G G  +Y LG+   A +A++R L LDPEN EA  
Sbjct: 3895 GMYRDAIEAFDKAIE-HDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWT 3953

Query: 191  ALAVMDLQANEAAGIRKGM-----EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
                           R+GM     +K + A E Y                          
Sbjct: 3954 ---------------RQGMVLSAQQKFEEALEHY-------------------------- 3972

Query: 246  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
             + AL +    PT S +Y+    +  +   Y++A   + A    ++   +F+  Y   G+
Sbjct: 3973 -DRALMID---PTFSIAYFTRGSALIAMKRYQEAVEAFDAM---LHIQPDFVDAYIHKGR 4025

Query: 306  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
               +L  ++ AL  F++ LEI P   E    +G I  ++G+ E+A+
Sbjct: 4026 ALQELELYQDALAVFKRALEIDPTRKECWNDIGDILDRIGKHEEAR 4071



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 159/397 (40%), Gaps = 56/397 (14%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YNKA  I       +  KG  L   G ++ A SAF    E D D++     ++ +   + 
Sbjct: 165 YNKAIEIVPGYARAYYNKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQD 224

Query: 132 RYSDSLEFYKRALQVHPSCPG--AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
           +   + +  ++ L   P      AIR   G+  +KLG+  +A  A ++A  ++P+  +A 
Sbjct: 225 QNEFAAQSAEKFLAQEPDHADIWAIR---GMSLFKLGRYDEALDALRQATAINPDLSDAW 281

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG-QHFLVEQLTET 248
             L +  ++  +       +E   R  EI+P  A AL       F  G  H+ ++Q  E 
Sbjct: 282 YYLGLAGVETRQ---FDDAVEAFTRNLEIHPGNAGAL-------FHRGLAHYRLKQYREA 331

Query: 249 AL---AVTNHGPTKSHSYY-------NLAR------SYHSK---GDYEKAGLYYMASVK- 288
                +     P    ++Y       NL+R      S++ +   G      LY+    + 
Sbjct: 332 VQDFDSTLEPEPGNKEAWYRRGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQA 391

Query: 289 EINKPHEFIFPY--------------YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
            + +  E I  +              +  G     LG F  A+ ++++ L I P   + +
Sbjct: 392 RLGRNKEAIESFDAALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAI 451

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTL 393
              G    +LG+ E A +   +    DP++A+AF   G +L+       A++AF  +  L
Sbjct: 452 YHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDESLAL 511

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             K G     +   + G      G+FE A Q+F  A+
Sbjct: 512 --KPGFA---QAAFDKGAALIRLGKFEDALQAFDQAI 543



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 131/341 (38%), Gaps = 40/341 (11%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            AT+ + K S +D        G+GQ L      E+A +AF   LE D     A   + C  
Sbjct: 2337 ATEAFEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLELDSTQAEAAYLRGCAY 2396

Query: 128  FNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
                 Y++++  +   +Q  P       R G+ L     G+  KA +++++AL  D    
Sbjct: 2397 LRLALYTEAISSFDYTIQYAPDHAQSHYRRGLAL--QAQGKYEKAIRSYKQALTHDGSIT 2454

Query: 187  EAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            +A+    L    L  N+ A     ++   R  E  P  A  L + +   F   ++     
Sbjct: 2455 DAVYQTGLCYAALNKNDQA-----LKTFDRVLETLPERADILFHKSRALFRLMRYEEALT 2509

Query: 245  LTETALAVTNHGPT----KSHSYYNLARSYHSKGDYEKA--------GLYYMA--SVKEI 290
              + +LA+ N+       K  + Y L R   S   Y+++          +Y+   S+ ++
Sbjct: 2510 AIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYLKGRSLSDL 2569

Query: 291  NKPHEFIFPYYGL---------------GQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
             +  E I P +                 G   L LG F  A+    + L++ PDN     
Sbjct: 2570 ARYEEAI-PCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPDNANGWY 2628

Query: 336  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              G    +L Q E A     +A  I+ + A A+ D G  L+
Sbjct: 2629 DRGIALAELKQYEDAVASYDRAIAINRKYANAWYDKGVALV 2669



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 7/148 (4%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A + ++KA   D +    W+GKG +    G+   A  A++  L  D +N  A   Q  V 
Sbjct: 3900 AIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVL 3959

Query: 128  FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
              + ++ ++LE Y RAL + P+   A    G  L   K  Q  +A +AF   L + P+ V
Sbjct: 3960 SAQQKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQ--EAVEAFDAMLHIQPDFV 4017

Query: 187  EALV----ALAVMDLQANEAAGIRKGME 210
            +A +    AL  ++L  +  A  ++ +E
Sbjct: 4018 DAYIHKGRALQELELYQDALAVFKRALE 4045



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 199/534 (37%), Gaps = 71/534 (13%)

Query: 84   STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
            + W  KG  L   G  E+A +AF   LE D  N  AL   A      G+ ++++E ++  
Sbjct: 3101 AAWHEKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAYAAIGKDAEAVESFELL 3160

Query: 144  LQVHPSCPGA-IRLGIGLCRYK--------------------------------LGQLGK 170
            L   P    A    G+ L R K                                LG   +
Sbjct: 3161 LTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDAHEVRARSFDSLGDPKE 3220

Query: 171  ARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
               A+ RAL L P +V +L    +A++ L+  E A     ++   RA EI P CA A+  
Sbjct: 3221 TIDAYNRALALQPMHVPSLHRKGVALIRLERYEEA-----IKVFDRALEIDPACADAIYD 3275

Query: 229  LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
                    G +    +  +  L +       S   Y+   +    G ++ A    +A  K
Sbjct: 3276 KGRALSALGMYREAVKTYDKLLGIDAGNAEVS---YDKGIALAHLGRHDDA---IVAFNK 3329

Query: 289  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
             ++         Y  G      G    A+  F++V+E  P + E     G     LG+  
Sbjct: 3330 ALDLDPGNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYN 3389

Query: 349  KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVL 406
             A E   +A  IDP +A+A+   G  + +S  G   DA +       KA E  P  +   
Sbjct: 3390 DAVESYVRAIAIDPSNAEAWYFKGSAIFAS--GGYEDAIEA----FNKALEFRPDYVSAY 3443

Query: 407  NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD----MQL 462
            N+ G   F  G F  A  +F +AL        L  K    +     S+L+ +     +Q 
Sbjct: 3444 NDKGRSLFHMGMFREAVIAFDNALA-------LQQKNVDALYHKGTSLLRLEQYDEAIQA 3496

Query: 463  FH-RFENDGNHVELPWNKVTVLFNLARLLEQI-HDTVAASVLYRLILFKYQDYVDAYLRL 520
            F    +   NH  L   K   L  L R  + +   T A  +  R     YQ  V +YL+L
Sbjct: 3497 FDLALKIRPNHAHLWTGKGIALSALGRDQDAVSFFTKALGIDSRDARAAYQLGV-SYLKL 3555

Query: 521  AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG---DLELKNDDWVKAKETF 571
            +   +A   L+ ++      ++ N +   AL+MLG   D     D  +  KE F
Sbjct: 3556 SKYHEAIRYLEGALAQQPACVEANYQKGRALAMLGMHNDAITAYDKAIAGKENF 3609



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 115/309 (37%), Gaps = 36/309 (11%)

Query: 89   KGQLLLAKGEVEQASSAFKIVLEADRDNVPALL--GQACVEFNRGRYSDSLEFYKRALQV 146
            KG  L   G+   A  +F   L+   D+ PA    G++ +E   GRY D++   KRA+++
Sbjct: 1168 KGLALAVLGDHRDAIGSFDKTLQILPDSAPAWYNKGKSLIEI--GRYPDAIVALKRAIEI 1225

Query: 147  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 206
              S   A    +G    K G    A +AF R L  D  N        +   ++       
Sbjct: 1226 ETSYTEAFYY-LGYALLKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRR---FE 1281

Query: 207  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH----FLVEQLTETALAVTNHGPTKSHS 262
            + +E   ++    P  A+A  +    +   G+H    F  ++  +     T+       +
Sbjct: 1282 EALESFDKSLIYDPGNALAFYHKGKVYADLGRHADAAFAFDKTLQLKPRYTDARLRMGIA 1341

Query: 263  YYNLARSYHSKGDYEKA---------GLYYMASVKEINKPHEFIFPYYGL---------- 303
             YNL +   S  D++K            YY A      K HE     Y L          
Sbjct: 1342 EYNLGKFIESIHDFDKTIAENANSSQAHYYKARALADLKRHEEAVGAYDLALRLDPDTAD 1401

Query: 304  -----GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
                 G   ++L  F  A+  FE+   + P N       G   V+L +   A ++L ++ 
Sbjct: 1402 IHYYKGFSLMELAQFEKAIPEFERTEVLTPANAMAFYQHGLALVRLERENDAIQVLDQSI 1461

Query: 359  KIDPRDAQA 367
             + PR A A
Sbjct: 1462 ALSPRYAPA 1470



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 120/298 (40%), Gaps = 22/298 (7%)

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
             W  KG  L     V +A +AF   +E D  N  +   +  V    GR+ ++++ + ++L
Sbjct: 1538 AWHRKGTALAELDRVPEALAAFDRAIEIDPANARSHFERGLVLARLGRHIEAIQAFDQSL 1597

Query: 145  QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANE- 201
             + P+   A     GL    +G   +A  +F  AL++ P++   L    LA+M L++ E 
Sbjct: 1598 SLIPNYVPAF-YNKGLALMAVGMHEEAVLSFNIALEILPDDPAVLYQKGLALMRLESFED 1656

Query: 202  AAGIRKGMEKMQRAFEIYPY-CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
            A G       +      YPY   +AL  L  H          ++      A     P   
Sbjct: 1657 AIGAFDAALAIDAQKTEYPYQKGLALAALGRH----------DEAEAAFSAALARDPDNQ 1706

Query: 261  HSYYNLARSYHSKGDYEKAGLYYMASVKEINK--PHEFIFPYYGLGQVQLKLGDFRSALT 318
             + Y+   S    G + +A +  +A   E N    + ++   + L  V+     +  AL 
Sbjct: 1707 DALYHKGLSLAELGRFSEA-IEDLAKTVERNPKIANAWLIQGFCLFAVE----RYSDALA 1761

Query: 319  NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
            +++K LE+   N  T    G   + LG    A     +A KI P   +AF  +G+ L 
Sbjct: 1762 SYDKALELETQNPHTWFYKGRTCLNLGNDSDAVLAFEQAIKIVPDFGEAFYYMGQALF 1819



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 64/301 (21%), Positives = 118/301 (39%), Gaps = 58/301 (19%)

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
           ++ +  ALL Q    ++ GR+ +++  + R L ++P    A     G+  Y LG+   A 
Sbjct: 2   NKSDAEALLRQGIELYDLGRFQEAIVMFDRGLALYPRLAKAHYFK-GIALYDLGKFEDAI 60

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC--AMALNY-L 229
            A+  A+ ++P +  A           N+AA + + + K + A E    C   +A+ Y  
Sbjct: 61  AAYDMAVSIEPSDPNAWY---------NKAATLAQ-VGKNEEALEA---CDRLLAIRYDN 107

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
           A  +   G           A++  +H     P  +  YYN   +    G +++A   Y  
Sbjct: 108 AEAWILKGIALYELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNK 167

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF------------------------- 320
           +++ +     +   YY  G    +LG+   AL+ F                         
Sbjct: 168 AIEIVPG---YARAYYNKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQD 224

Query: 321 ---------EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
                    EK L   PD+ +     G    +LG+ ++A + LR+A  I+P  + A+  L
Sbjct: 225 QNEFAAQSAEKFLAQEPDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDLSDAWYYL 284

Query: 372 G 372
           G
Sbjct: 285 G 285



 Score = 40.4 bits (93), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 132/360 (36%), Gaps = 79/360 (21%)

Query: 50   YLGKIETKQREKEEHFIL--------------ATQYYNKASRIDMHEPSTWVGKGQLLLA 95
            YLGK   K+R K+   +L              A   ++K + ID      W  KGQ LLA
Sbjct: 2136 YLGK-AVKRRPKDRTVLLFRGKAFLRLGRWENAYGMFDKLTAIDPKYVKGWYYKGQALLA 2194

Query: 96   KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC-PGAI 154
            K   E A  AF+  +  +     A   +     +  R+++++  + RAL++ P     A 
Sbjct: 2195 KDLYEDALLAFETAISLEETCAGAWYNKGRALGSLARHAEAVAAFNRALELQPDMRDAAY 2254

Query: 155  RLGIGL----------------------------CR----YKLGQLGKARQAFQRALQLD 182
            R G+ L                            CR     +L +  +A ++F + + L 
Sbjct: 2255 RKGLALAAQYLHSDAVAAFDSAASLGLDQGELWYCRGTSLMQLARWQEALESFNKTIALV 2314

Query: 183  PENVEALV--ALAVMDLQANEAA-------------------GIRKGMEKMQRAFEIYPY 221
            P+N  A +   L +  L  + AA                   G  + + ++ R  E    
Sbjct: 2315 PDNAPAWLNKGLCLQKLNYHAAATEAFEKTSALDATSVPAAFGRGQSLAELDRDEEAIAA 2374

Query: 222  CAMAL---NYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKG 274
                L   +  A   +  G  +L   L   A++       + P  + S+Y    +  ++G
Sbjct: 2375 FTRTLELDSTQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQG 2434

Query: 275  DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
             YEKA   Y  ++       + ++   GL    L   D   AL  F++VLE  P+  + L
Sbjct: 2435 KYEKAIRSYKQALTHDGSITDAVYQ-TGLCYAALNKND--QALKTFDRVLETLPERADIL 2491


>gi|365894959|ref|ZP_09433090.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
           TPR domain protein [Bradyrhizobium sp. STM 3843]
 gi|365424290|emb|CCE05632.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
           TPR domain protein [Bradyrhizobium sp. STM 3843]
          Length = 740

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 135/312 (43%), Gaps = 23/312 (7%)

Query: 124 ACVEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           A VE  R GR++D+    ++ L++ P    A+ L +G+     G+L  A QA  RA+ L+
Sbjct: 29  AAVEAYRAGRHADTQAICRQILELLPDYFPALHL-LGISALDCGRLDVAEQALTRAVALE 87

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P + EALV L ++          RK  E   RA    P  A+A   L N         L 
Sbjct: 88  PRHAEALVNLGLVYFHQKRYEEARKLQE---RATAAKPNFAVAFTTLGNTLM---NMRLF 141

Query: 243 EQLTET---ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
           +Q  E    A+AV    P  + +Y N   +      +++A   +  ++  +N  H  +  
Sbjct: 142 DQALEAHQRAIAVK---PDYADAYCNRGMTQLLMQRHQEAYESFNRALA-LNPRH--MHA 195

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
            +GLG V + L     ALT+F   L I P N   L   G +++Q+G  E A+     A  
Sbjct: 196 TFGLGLVGVNLRHCDQALTSFNAALAISPGNAAILAQRGRLHLQMGHFEPAEADFDAALV 255

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK-AGEEVPIEVLNNIGVIHFEKGE 418
            DP    A   LG+  ++   G    A      +L++ A  EV    L  +G    ++G+
Sbjct: 256 ADPNLEAAL--LGKAHVNVLNGNVAPAMAACNKVLEQNASSEV---ALVWLGACLAKQGD 310

Query: 419 FESAHQSFKDAL 430
              A Q F  AL
Sbjct: 311 VTGAIQLFDRAL 322



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 35  YERIAILNALGVYYTY-LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 93
           + R   LN   ++ T+ LG +    R  ++    A   +N A  I     +    +G+L 
Sbjct: 182 FNRALALNPRHMHATFGLGLVGVNLRHCDQ----ALTSFNAALAISPGNAAILAQRGRLH 237

Query: 94  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
           L  G  E A + F   L AD +   ALLG+A V    G  + ++    + L+ + S   A
Sbjct: 238 LQMGHFEPAEADFDAALVADPNLEAALLGKAHVNVLNGNVAPAMAACNKVLEQNASSEVA 297

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           + + +G C  K G +  A Q F RAL++ P+  EA+ 
Sbjct: 298 L-VWLGACLAKQGDVTGAIQLFDRALEIKPDFEEAVT 333


>gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 666

 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 31/351 (8%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +GQ          A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P
Sbjct: 297 QGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINP 356

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
                  LG G    KL +  +A ++F+R L L+P   +A    A + L+  + +  +K 
Sbjct: 357 DSAWQAWLGRGKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKA 416

Query: 209 MEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKS 260
           +EK+    Q   +I+     +L  L +   + G     +Q    ALA+ +        K 
Sbjct: 417 LEKLLTFQQNDAKIWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKG 469

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
           +S Y L +  ++   Y KAG +          P +F   +Y  G +  KLG    AL  F
Sbjct: 470 NSLYQLNKINNALESYSKAGQF---------NP-QFSQAHYSQGIILQKLGRNSEALEAF 519

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 379
            +  +   +  +     G +  QL + ++A     KA +I  R ++ FI +G       D
Sbjct: 520 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGD 579

Query: 380 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              A+ A++ A    K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 580 YSQAITAYQQAIQRQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 625



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 134/325 (41%), Gaps = 50/325 (15%)

Query: 35  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 94
           YE+   +N    +  +LG+   K  +K +    A + + +   ++      W GK  + L
Sbjct: 348 YEKAIQINPDSAWQAWLGR--GKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYL 405

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
              +   A  A + +L   +++      +     N   Y  +++ Y +AL +  S    I
Sbjct: 406 ELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIE-SDNALI 464

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
               G   Y+L ++  A +++ +A Q +P+  +A  +  ++             ++K+ R
Sbjct: 465 WYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAHYSQGII-------------LQKLGR 511

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             E       A    +N++    Q +L            N G       + L R   +  
Sbjct: 512 NSEALEAFTQATKANSNYY----QAWL------------NQGAL----LHQLERFQEAIA 551

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
            YEKA        + I+     +F   G+G    +LGD+  A+T +++ ++   DN ET 
Sbjct: 552 SYEKA--------RRISSRKSEVF--IGIGNACYRLGDYSQAITAYQQAIQRQKDNPETW 601

Query: 335 KALGHIYVQLGQIEKA----QELLR 355
           K+LG+ + +LGQ E+A    QE LR
Sbjct: 602 KSLGNSWFKLGQYERAIQAYQESLR 626


>gi|119493195|ref|ZP_01624070.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119452760|gb|EAW33937.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 899

 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 23/230 (10%)

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           +E  + LA+  L   E   I   +E  Q+   + P CA+A   L N         + EQL
Sbjct: 3   IELQLQLALSHL---EQGKIESSIEICQQVLRLSPRCAVAYRILGNI------REVQEQL 53

Query: 246 TETALA---VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           TE ALA        P  + +Y +LA+ Y + G  + A L Y  ++K       +I  YY 
Sbjct: 54  TEAALAYAKAIELQPDDAVAYAHLAQLYRNAGWIDDAVLLYQTAIKLQTS---WIALYYH 110

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG+   + G+F S++ +++KV+   P   +    L  ++    Q+++A +LL++   ID 
Sbjct: 111 LGEAFYQQGNFTSSIASYQKVITKNPKFVKAYLGLALVFNSQSQVDQAIKLLKRVINIDS 170

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIG 410
              +A+  LG LLI          F  A  + +KA  + P   +  NN+G
Sbjct: 171 NYTEAYNTLGCLLIEKQQ------FLDAVEIFQKAINQKPEWAILYNNLG 214



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 141/328 (42%), Gaps = 20/328 (6%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
           ++ +A+ A+   +E   D+  A    A +  N G   D++  Y+ A+++  S   A+   
Sbjct: 52  QLTEAALAYAKAIELQPDDAVAYAHLAQLYRNAGWIDDAVLLYQTAIKLQTSW-IALYYH 110

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +G   Y+ G    +  ++Q+ +  +P+ V+A + LA++    N  + + + ++ ++R   
Sbjct: 111 LGEAFYQQGNFTSSIASYQKVITKNPKFVKAYLGLALV---FNSQSQVDQAIKLLKRVIN 167

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           I      A N L        Q FL     E      N  P  +  Y NL +++ +    E
Sbjct: 168 IDSNYTEAYNTLGC-LLIEKQQFL--DAVEIFQKAINQKPEWAILYNNLGQAWLA---LE 221

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           K G    A  + +         Y  L ++  +   ++ A+  F+K +E  P N       
Sbjct: 222 KKGQAIKAYHRALELQPSLTIAYLNLAKLYQQHNHYKRAVDYFQKAIEQTPKNILAYSDC 281

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 397
           G+   + GQ ++A    +KA  +DP+  +A+    E +  S+T A  D ++ A+      
Sbjct: 282 GYSLQKQGQFDQAMVYYQKAIALDPKFVEAYCRRFESMSISETEA--DEWQLAKNAC--- 336

Query: 398 GEEVPIEVLNNIGVIHFEKGEFESAHQS 425
                +  L ++  I+F  G F ++ QS
Sbjct: 337 -----VRFLRSLQQINFNSGNFNASDQS 359



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 138/307 (44%), Gaps = 24/307 (7%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
           +G+   S+E  ++ L++ P C  A R+ +G  R    QL +A  A+ +A++L P++  A 
Sbjct: 16  QGKIESSIEICQQVLRLSPRCAVAYRI-LGNIREVQEQLTEAALAYAKAIELQPDDAVAY 74

Query: 190 VALAVMDLQA---NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
             LA +   A   ++A  + +   K+Q ++       +AL Y     F+   +F      
Sbjct: 75  AHLAQLYRNAGWIDDAVLLYQTAIKLQTSW-------IALYYHLGEAFYQQGNFTSS--I 125

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
            +   V    P    +Y  LA  ++S+   ++A +  +  V  IN    +   Y  LG +
Sbjct: 126 ASYQKVITKNPKFVKAYLGLALVFNSQSQVDQA-IKLLKRV--INIDSNYTEAYNTLGCL 182

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
            ++   F  A+  F+K +   P+       LG  ++ L +  +A +   +A ++ P    
Sbjct: 183 LIEKQQFLDAVEIFQKAINQKPEWAILYNNLGQAWLALEKKGQAIKAYHRALELQPSLTI 242

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQ 424
           A+++L +L    +       +K A    +KA E+ P  +L  ++ G    ++G+F+ A  
Sbjct: 243 AYLNLAKLYQQHNH------YKRAVDYFQKAIEQTPKNILAYSDCGYSLQKQGQFDQAMV 296

Query: 425 SFKDALG 431
            ++ A+ 
Sbjct: 297 YYQKAIA 303



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 4/135 (2%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++G   +  ++ +V+QA    K V+  D +   A     C+   + ++ D++E +++A+ 
Sbjct: 142 YLGLALVFNSQSQVDQAIKLLKRVINIDSNYTEAYNTLGCLLIEKQQFLDAVEIFQKAIN 201

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 205
             P     +   +G     L + G+A +A+ RAL+L P    A + LA +  Q N     
Sbjct: 202 QKPEW-AILYNNLGQAWLALEKKGQAIKAYHRALELQPSLTIAYLNLAKLYQQHNH---Y 257

Query: 206 RKGMEKMQRAFEIYP 220
           ++ ++  Q+A E  P
Sbjct: 258 KRAVDYFQKAIEQTP 272


>gi|452821043|gb|EME28078.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           SPINDLY-lie protein [Galdieria sulphuraria]
          Length = 1154

 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 45/302 (14%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G   +++ +Y+ AL V+P+   A    +G+    LG+   A + +  A+Q +P + EA  
Sbjct: 449 GLSKEAISYYQEALSVYPTFSQAC-YNLGVTFADLGKTDDALRYYTEAVQCNPHHAEAYC 507

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
              V+     E   +   +EK +++ E  P   +A N LA                    
Sbjct: 508 NAGVI---YKEKGDLMTAIEKYKQSLESNPNFDLARNNLA-------------------- 544

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQL 308
                      +Y +L   + +KGD  K+  YY  S+  +N      +P  +Y LG    
Sbjct: 545 ----------IAYSDLGTVWKTKGDLSKSVYYYKKSLS-LNP----CYPDAHYNLGVAYS 589

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
           +   F  A+T++E  +   P + E+L  LG +Y ++G +E+A    + A  I+P   Q F
Sbjct: 590 EARKFDRAVTHYELAIRFNPSHTESLNNLGVLYKEMGNLERAIASYKAALNINP---QYF 646

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 428
                L +      A D  K   ++          E  NN+GV+  ++G+   A + ++ 
Sbjct: 647 QTHNNLAVVYTIMGACDLAKEHLSMAIALNSSYA-EAHNNLGVLLRDEGDIHGAIEHYEQ 705

Query: 429 AL 430
            L
Sbjct: 706 CL 707



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 25/247 (10%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LGV +  LGK +            A +YY +A + + H    +   G +   KG++  A 
Sbjct: 475 LGVTFADLGKTDD-----------ALRYYTEAVQCNPHHAEAYCNAGVIYKEKGDLMTAI 523

Query: 104 SAFKIVLEAD------RDNVP-ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
             +K  LE++      R+N+  A      V   +G  S S+ +YK++L ++P  P A   
Sbjct: 524 EKYKQSLESNPNFDLARNNLAIAYSDLGTVWKTKGDLSKSVYYYKKSLSLNPCYPDA-HY 582

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G+   +  +  +A   ++ A++ +P + E+L  L V+     E   + + +   + A 
Sbjct: 583 NLGVAYSEARKFDRAVTHYELAIRFNPSHTESLNNLGVL---YKEMGNLERAIASYKAAL 639

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
            I P      N LA  +   G   L ++    A+A+ N    ++H+  NL      +GD 
Sbjct: 640 NINPQYFQTHNNLAVVYTIMGACDLAKEHLSMAIAL-NSSYAEAHN--NLGVLLRDEGDI 696

Query: 277 EKAGLYY 283
             A  +Y
Sbjct: 697 HGAIEHY 703


>gi|432879797|ref|XP_004073552.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Oryzias latipes]
          Length = 1016

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 14/307 (4%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G LL A G +E+A + +   +E   +   A     CV   +G    ++  +++A+ + P+
Sbjct: 132 GNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN 191

Query: 150 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
              A I LG  L   ++    +A   + RAL L P +      LA +     E   I   
Sbjct: 192 FLDAYINLGNVLKEARI--FDRAVAGYLRALSLSPNHAVVHGNLACVYY---EQGLIDLA 246

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
           ++  +RA E+ P+   A   LAN     G     E+   TAL +    PT + S  NLA 
Sbjct: 247 IDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC---PTHADSLNNLAN 303

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
               +G+ E+A   Y  +++      EF   +  L  V  + G  + AL ++++ + I P
Sbjct: 304 IKREQGNIEEAVQLYRKALEVFP---EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISP 360

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
              +    +G+   ++  ++ A +   +A +I+P  A A  +L    I  D+G   +A  
Sbjct: 361 TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLAS--IHKDSGNIPEAIA 418

Query: 389 TARTLLK 395
           + RT LK
Sbjct: 419 SYRTALK 425



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/332 (20%), Positives = 135/332 (40%), Gaps = 48/332 (14%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 158 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 213

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           + +   L    ++       ACV + +G    +++ Y+RA+++ P  P A    +     
Sbjct: 214 AGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAY-CNLANALK 272

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + G + +A + +  AL+L P + ++L  LA +     E   I + ++  ++A E++P  A
Sbjct: 273 EKGNVSEAEECYNTALRLCPTHADSLNNLANIK---REQGNIEEAVQLYRKALEVFPEFA 329

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A                                   HS  NLA     +G  ++A ++Y
Sbjct: 330 AA-----------------------------------HS--NLASVLQQQGKLQEALMHY 352

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++ I+    F   Y  +G    ++ D + AL  + + ++I P   +    L  I+  
Sbjct: 353 KEAIR-ISP--TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD 409

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            G I +A    R A K+ P    A+ +L   L
Sbjct: 410 SGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 441



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 129/306 (42%), Gaps = 26/306 (8%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           GR  ++   Y +A++  P+   A    +G      G++  A   F++A+ LDP  ++A +
Sbjct: 139 GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYI 197

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
            L  +     EA    + +    RA  + P  A+    LA  ++  G   L       A+
Sbjct: 198 NLGNV---LKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAI 254

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LGQ 305
            +  H P    +Y NLA +   KG+  +A   Y  +++        + P +      L  
Sbjct: 255 ELQPHFPD---AYCNLANALKEKGNVSEAEECYNTALR--------LCPTHADSLNNLAN 303

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
           ++ + G+   A+  + K LE++P+       L  +  Q G++++A    ++A +I P  A
Sbjct: 304 IKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFA 363

Query: 366 QAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 424
            A+ ++G  L    D   AL  +  A  +          +  +N+  IH + G    A  
Sbjct: 364 DAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----DAHSNLASIHKDSGNIPEAIA 418

Query: 425 SFKDAL 430
           S++ AL
Sbjct: 419 SYRTAL 424



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 96/496 (19%), Positives = 183/496 (36%), Gaps = 86/496 (17%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA--NEAAGIRKGMEKMQR 214
            +G    + GQL +A + ++ AL+L P+ +         DL    ++   + K + +++ 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIXXXXXXXXXDLYCVRSDLGNLLKALGRLEE 143

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           A   Y                              L      P  + ++ NL   ++++G
Sbjct: 144 AKACY------------------------------LKAIETQPNFAVAWSNLGCVFNAQG 173

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 174 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 230

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 231 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 290

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 291 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 322

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 323 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 362

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 363 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 422

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 423 ALKLKPDFPDAYCNLA 438


>gi|390441006|ref|ZP_10229192.1| putative glycosyl transferase [Microcystis sp. T1-4]
 gi|389835660|emb|CCI33318.1| putative glycosyl transferase [Microcystis sp. T1-4]
          Length = 562

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 27/297 (9%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G  LLA GE E A SA++ VL    ++V A +  A V  ++ RYS++LE Y R   V+ 
Sbjct: 44  QGDRLLAAGEKESALSAYRTVLSFHENSVQAHIKIAQVLQSQKRYSEALEAYNRGFIVND 103

Query: 149 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQ-ANE 201
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ  +E
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAIMIKPTFKAQFQLGKALYSLQRWDE 163

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 257
           AA      + +Q A  + P    A       +F+ G+ +  +QL + A           P
Sbjct: 164 AA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWQEASYAYEQALELIP 210

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
           ++   Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G   +A+
Sbjct: 211 SQGEIYKKLGEALGKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLGAAM 267

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             F++  +I P N    + L + Y+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 268 AVFQQARQISPKNANIYENLCYTYINSGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|196232461|ref|ZP_03131314.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223533|gb|EDY18050.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 760

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 128/291 (43%), Gaps = 27/291 (9%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           GR  +++E Y+RALQ+ P+ P        L R + G+L +A    Q+A++L P  VE   
Sbjct: 88  GRVDEAMEAYRRALQLQPALPEPYHNLANLLR-QTGRLNEAVGWLQQAIRLRPHGVELHK 146

Query: 191 ALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
            L         AAG + + +   Q A  + P  A A N L N     G+  L E +T   
Sbjct: 147 NLG----DVLSAAGRKDEAIAAYQEAIRLNPNFAEAYNNLGN--ILRGERRLSEAITVFG 200

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQ 307
            A     P  +  + NLA +    G +  A   Y  ++K   KP    FP   +GLG   
Sbjct: 201 EA-QRLLPDSAEIHNNLAAALADDGQFAHADAAYQRALKI--KP---AFPQALFGLGNNL 254

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            K G    A   F   LE  PD  +    LG++  ++GQ+++A    R+   + P  A+ 
Sbjct: 255 AKQGRRDEAAAAFRAALETQPDYAKAWNNLGNLLREMGQMDEAIAAYRRTIALQPDYAEV 314

Query: 368 FIDLGELLISSDTG---AALDAFKTARTL-LKKAGEEVPIEVLNNIGVIHF 414
           + +L   L   DTG    A++  + AR L  K AG +      N I  +HF
Sbjct: 315 YSNLANAL--KDTGDLDGAMETHRWARRLQPKNAGIQS-----NVIYTLHF 358


>gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
 gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
          Length = 1129

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 151/386 (39%), Gaps = 60/386 (15%)

Query: 50  YLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIV 109
           + GK  T    K E +  A   Y+ A  I+      W  KG  L   G  E+A   ++  
Sbjct: 645 WYGKAST--YSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGRSEEALECYQKA 702

Query: 110 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
           L+ D  +  A  G A    + GR  +++ +Y + L+++ +   A++ G  L    LG+  
Sbjct: 703 LDIDPQSSNAWYGMASTSSDLGRAEEAIAYYDQLLKLNSTDSEALQ-GKSLALASLGRYD 761

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
           +A   F   L+L+PENVEAL   A         A  R G  + + A E Y          
Sbjct: 762 EAVACFNPLLELEPENVEALEGRAF--------ALARSG--RPEAALEDYD--------- 802

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
                                 +    PT S +    A      G Y++A   Y   + E
Sbjct: 803 ---------------------VIMKLDPTNSKALSEKASLLEELGRYDEAASTY-GEILE 840

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
           I   +  I   Y  G+    +GDF +A+  ++K+L + P N + +   G     L ++EK
Sbjct: 841 ITPENREIM--YRQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKG---FALSKMEK 895

Query: 350 AQELLR---KAAKIDPRDAQA--FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 404
            QE L    KA + DP +  A  F       ISS+  AAL+ F     L         I 
Sbjct: 896 YQEALATYDKALEYDPDNPAAWYFKGCANFAISSNN-AALECFNKTVQLKPDC-----IT 949

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDAL 430
              N G +    G+   +  S++ AL
Sbjct: 950 AWYNKGYLANVLGDVNESINSYESAL 975



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 126/328 (38%), Gaps = 43/328 (13%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+KA ++D      W  KG      G+ + A  ++   ++ D +   A  G+A   
Sbjct: 454 AVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFAL 513

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GRY DS+  Y R L+V P     I    GL   +LG+  +A   + +ALQ+   N  
Sbjct: 514 AKIGRYEDSIVCYDRVLEVAPD-SAEIWYNKGLLLDELGRYQEASDCYSQALQI---NSN 569

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
             VA   ++      +G    +    +   I P  A+   + +                 
Sbjct: 570 YSVARFRLNKDIEMLSGNLTSISANNKNTNINPQKAITGGFWS----------------- 612

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
                           Y L+  Y S  D  +       S+K+++    +   +YG     
Sbjct: 613 ----------------YLLSYKYASPDDNTEIS----GSIKDLSPEFGYDEAWYGKASTY 652

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            KL  +  AL +++  L I P   E     G    +LG+ E+A E  +KA  IDP+ + A
Sbjct: 653 SKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGRSEEALECYQKALDIDPQSSNA 712

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLK 395
           +  +     SSD G A +A      LLK
Sbjct: 713 WYGMAS--TSSDLGRAEEAIAYYDQLLK 738



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 124/344 (36%), Gaps = 61/344 (17%)

Query: 53  KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA 112
           +++ K   + E++  A   +N+A  +   +   W  KG +    G+ E A   +   +  
Sbjct: 202 QMQGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISL 261

Query: 113 DRDNVPALLGQACVEFNRGR-------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           + D V A        +N+G        Y D+L  Y+  L   P    A++   GLC  +L
Sbjct: 262 NPDLVEAW-------YNKGMDLERMEMYQDALTCYEFVLLSEPENLSALQ-KKGLCLERL 313

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G+  +A Q +   L   P+N EA  +             +   M +   A   Y     A
Sbjct: 314 GRNEEALQCYDEILVYSPDNTEAWYS----------KGSVLNAMGQYDAAIICYD---RA 360

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
           LN  A          L+E L                      + Y S        L   +
Sbjct: 361 LNPDAGIEIQEAGDSLLESL----------------------KVYDSS-------LPVYS 391

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
            V E   P   I  +Y  G     LG++ SAL  + KVLE  PD+       G    +L 
Sbjct: 392 EVPEFKSPAVKI--WYDKGMAFDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLN 449

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
           +  +A     KA K+D   A+ +   G    SS  G   DA K+
Sbjct: 450 KSAEAVGCYDKALKLDSGYAKVWYKKG--YDSSKLGKYKDAVKS 491


>gi|73669941|ref|YP_305956.1| hypothetical protein Mbar_A2461 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397103|gb|AAZ71376.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 398

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 42/285 (14%)

Query: 99  VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
           + +A +A +  LE + ++  A  G+A V     +YSDSL+  K+AL++ P  P  +    
Sbjct: 72  LNKALAAHEKALEKNPEDSAAWAGKAAVFLKHRKYSDSLKAIKKALEIEPENPHYL-YEK 130

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAF 216
           G    +L + G A QAF R L++ P++ +A  L    +  L+ +E     K +   ++A 
Sbjct: 131 GFVLLQLNREGDALQAFDRLLEIKPDSDKAWNLKTSVLCRLKQHE-----KALGDSEKAL 185

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
              P    A +   +     G++   E+  E   A     P       NLAR    KG  
Sbjct: 186 SSNPKLGGAWHSKGSVLADLGRY---EEAIEAYDAALKLNP-------NLARVLVGKG-- 233

Query: 277 EKAGLYYMASVKEINKPHEFIFPY--------------YGLGQVQLKLGDFRSALTNFEK 322
               LY       +++P E +  Y               G G + LKLG F+ A+    K
Sbjct: 234 --FALY------SLDRPVEAMIAYDAALKINPDNAKNWIGKGLIHLKLGKFKRAIAACSK 285

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            + I PD+ +     G  +  L +  +A   L +A +IDP + +A
Sbjct: 286 AISIKPDSSDAWYCKGMAFSSLDKNGEALGALERALRIDPDNIEA 330



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y+ A +++ +     VGKG  L +     +A  A+   L+ + DN    +G+  + 
Sbjct: 211 AIEAYDAALKLNPNLARVLVGKGFALYSLDRPVEAMIAYDAALKINPDNAKNWIGKGLIH 270

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G++  ++    +A+ + P    A     G+    L + G+A  A +RAL++DP+N+E
Sbjct: 271 LKLGKFKRAIAACSKAISIKPDSSDAWYCK-GMAFSSLDKNGEALGALERALRIDPDNIE 329

Query: 188 ALVALAVMD 196
           A  ALA ++
Sbjct: 330 ARKALASVN 338


>gi|326433206|gb|EGD78776.1| TPR repeat containing protein [Salpingoeca sp. ATCC 50818]
          Length = 609

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 59/303 (19%)

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +GL     G+  +A   FQ+ALQ+                       +R   EK +    
Sbjct: 280 VGLVLNTFGEHDQAIAYFQKALQIR----------------------LRTEGEKGENVAA 317

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH-----SYYNLARSYHS 272
           +Y       + L N +F  GQ+    +  E ALA+      + H     +Y NL  +Y S
Sbjct: 318 LY-------SNLGNVYFSQGQYDKAIEFYEKALAIRVETLGEKHLSTANTYNNLGNAYCS 370

Query: 273 KGDYEKAGLYY---MASVKEI--NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI- 326
           KG+Y+K  ++Y   +A   E+  +K       Y  LG      G++ +A+ ++EK L I 
Sbjct: 371 KGEYDKTIVFYDKALAIKLELLGDKHPSTADTYNNLGLAYADKGEYDTAIQHYEKALAIR 430

Query: 327 -------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDL 371
                  +P   +T   LG+ Y   G+ +KA EL  K   I         P  A ++ +L
Sbjct: 431 VEMLGEKHPSTADTYHNLGNAYADKGEYDKAIELYEKDLTITVEAWGEKHPNTADSYNNL 490

Query: 372 GELLIS-SDTGAALDAFKTARTLL-KKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFK 427
           G    S  + G A++ ++ A  +  +  GE+ P     L NIG++H E+G+ E A    +
Sbjct: 491 GSAYHSKGEYGKAIELYEKALAIAAETVGEKHPSTAMTLENIGMLHNERGDKEQACAHIQ 550

Query: 428 DAL 430
            AL
Sbjct: 551 QAL 553



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 48/295 (16%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEA-------DRDNVPAL---LGQACVEFNRGRYSDSLEF 139
           G +L   GE +QA + F+  L+          +NV AL   LG   V F++G+Y  ++EF
Sbjct: 281 GLVLNTFGEHDQAIAYFQKALQIRLRTEGEKGENVAALYSNLGN--VYFSQGQYDKAIEF 338

Query: 140 YKRALQVHPSCPGAIRLG-------IGLCRYKLGQLGKARQAFQRALQLD--------PE 184
           Y++AL +     G   L        +G      G+  K    + +AL +         P 
Sbjct: 339 YEKALAIRVETLGEKHLSTANTYNNLGNAYCSKGEYDKTIVFYDKALAIKLELLGDKHPS 398

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEK-----MQRAFEIYPYCAMALNYLANHFFFTGQH 239
             +    L +      E     +  EK     ++   E +P  A   + L N +   G++
Sbjct: 399 TADTYNNLGLAYADKGEYDTAIQHYEKALAIRVEMLGEKHPSTADTYHNLGNAYADKGEY 458

Query: 240 FLVEQLTETALAVTNHG-----PTKSHSYYNLARSYHSKGDYEKA-GLYYMA---SVKEI 290
               +L E  L +T        P  + SY NL  +YHSKG+Y KA  LY  A   + + +
Sbjct: 459 DKAIELYEKDLTITVEAWGEKHPNTADSYNNLGSAYHSKGEYGKAIELYEKALAIAAETV 518

Query: 291 NKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEIY-----PDNCETLKALGH 339
            + H         +G +  + GD   A  + ++ L++Y     PD+  T +A+ H
Sbjct: 519 GEKHPSTAMTLENIGMLHNERGDKEQACAHIQQALDVYAITFGPDHPNT-RAVQH 572


>gi|334117761|ref|ZP_08491852.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333460870|gb|EGK89478.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1363

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 135/285 (47%), Gaps = 12/285 (4%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRD-NVPALLGQACVEFNRGR-YSDSLEFYKRALQVH 147
           G+++  +GE+EQA   ++  +  DR+ N+P +     + +++G+ +  ++   ++A+ + 
Sbjct: 52  GKVMQVRGEIEQAKQWYEAAI--DRNPNLPEVYANLGILYSQGKQWGKAIANCEKAISLA 109

Query: 148 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 207
           P+   A R  +     +L +  +A   + +A  +DP    A   + + +    E     +
Sbjct: 110 PNFAAAYR-QLARVWTQLEKQEEAADCWYQAFNIDPNWATAEEHVTLGN-SLVELGKFDR 167

Query: 208 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 267
            +E   RA ++ P  A A + L       GQ    E +     A+  + P    SY++L 
Sbjct: 168 AIECYSRAIKLNPTLAKAYHNLGE--MLIGQKRWDEAIANYRQAIAIN-PNSFESYHSLG 224

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
           +++  +G++++A   Y  S+ E+N    +   Y GLG V  +  DF +A+  + + LEI 
Sbjct: 225 KTWAERGEFDRAIACYNKSL-ELNP--NYARAYVGLGNVFAQKRDFDAAIKCYRQTLEIN 281

Query: 328 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
            ++      LG  + Q    ++A    RKA +I+P     +++LG
Sbjct: 282 DNSYWAYNCLGDAFAQKQMWQEAISCYRKAIEINPNIPWFYVNLG 326



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 3/119 (2%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  S +Y+ L  +  +  +Y++A   Y  ++ E+N   +F + Y  LG V ++L ++  A
Sbjct: 763 PNFSWAYHFLGETLQALEEYDEATAAYRKAI-ELNP--DFCWTYNNLGDVLMELSEWEEA 819

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
              + K++E+ PD C + + LG  +V L   E A E  RKA +++P D   +  LGE+L
Sbjct: 820 AVAYRKLVELNPDFCWSYERLGKAWVALENWEDATEAYRKAIELNPDDCWLYNSLGEVL 878



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 151/345 (43%), Gaps = 23/345 (6%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           + ++ LA+G++ +A +A +  L+ + +   A      V   RG    + ++Y+ A+  +P
Sbjct: 17  QAEVYLAEGKLNEAVAACESALKIEPNLAAACQTLGKVMQVRGEIEQAKQWYEAAIDRNP 76

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
           + P  +   +G+   +  Q GKA    ++A+ L P    A   LA +  Q  +     + 
Sbjct: 77  NLP-EVYANLGILYSQGKQWGKAIANCEKAISLAPNFAAAYRQLARVWTQLEKQ---EEA 132

Query: 209 MEKMQRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
            +   +AF I P  A A  +  L N     G+    ++  E         PT + +Y+NL
Sbjct: 133 ADCWYQAFNIDPNWATAEEHVTLGNSLVELGK---FDRAIECYSRAIKLNPTLAKAYHNL 189

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
                 +  +++A   Y  ++  IN P+ F   Y+ LG+   + G+F  A+  + K LE+
Sbjct: 190 GEMLIGQKRWDEAIANYRQAIA-IN-PNSF-ESYHSLGKTWAERGEFDRAIACYNKSLEL 246

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 386
            P+       LG+++ Q    + A +  R+  +I+     A+  LG      D  A    
Sbjct: 247 NPNYARAYVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWAYNCLG------DAFAQKQM 300

Query: 387 FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 431
           ++ A +  +KA     IE+  NI   +   G   +  +S+ +A+ 
Sbjct: 301 WQEAISCYRKA-----IEINPNIPWFYVNLGIAFTCEKSWDEAVA 340



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 147/338 (43%), Gaps = 42/338 (12%)

Query: 27  DEYYADVRYERIAI-LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 85
           DE  A+ R + IAI  N+   Y++ LGK   ++ E    F  A   YNK+  ++ +    
Sbjct: 200 DEAIANYR-QAIAINPNSFESYHS-LGKTWAERGE----FDRAIACYNKSLELNPNYARA 253

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQACVEFNRGRYSDSLEFYKRA 143
           +VG G +   K + + A   ++  LE + ++  A   LG A  +  +  + +++  Y++A
Sbjct: 254 YVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWAYNCLGDAFAQ--KQMWQEAISCYRKA 311

Query: 144 LQVHPSCPG-AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 202
           ++++P+ P   + LGI     K     +A  AF  A+Q++P N+  +       L+    
Sbjct: 312 IEINPNIPWFYVNLGIAFTCEK--SWDEAVAAFLHAVQIEP-NLTGINQRLGYVLRKRSE 368

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
           +G+   +    +A E+     +  N L       G  F                      
Sbjct: 369 SGLDSTIATYCQAIEVLASGKIYQNLLGIE--LDGAEF---------------------- 404

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           Y NL  S   +   E A ++Y  +++      E +     L +V+ K  +  + +  +  
Sbjct: 405 YINLGNSLAKQKQLEGAIVFYSMALQIEPNAAEVVAQ---LDKVRAKQQELYAQIAAYRH 461

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            +EI P N +    LG+I  QLG++E+A    +KA+++
Sbjct: 462 QIEIEPTNSKPYNDLGNILPQLGELEEAIICHQKASEL 499



 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 22/293 (7%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRA 143
           W   G +    G +++AS+ ++  ++    N      LG+A  E  +  + ++   Y+RA
Sbjct: 701 WEKLGDIAANTGYLDEASARYQTAIKIKSGNYLTYHKLGKALQE--KELFDEARAAYQRA 758

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANE 201
           ++++P+   A    +G     L +  +A  A+++A++L+P+       L   +M+L   E
Sbjct: 759 IELNPNFSWAYHF-LGETLQALEEYDEATAAYRKAIELNPDFCWTYNNLGDVLMELSEWE 817

Query: 202 AAGI--RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
            A +  RK +E        Y     A   L N           E  TE         P  
Sbjct: 818 EAAVAYRKLVELNPDFCWSYERLGKAWVALENW----------EDATEAYRKAIELNPDD 867

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
              Y +L      + ++ +A    +A  + I   HE  + Y  LG      G+   A+  
Sbjct: 868 CWLYNSLGEVLEFQENWPEAA---VAFGRAIELEHEHSWLYKKLGDALRNQGELERAIAI 924

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           +EK + + P +C   + LG   +   Q E A   L +A +I P   +A+ ++G
Sbjct: 925 YEKGINLDPKSCWCYEGLGLSLIAKQQWEPAITNLVQALQIKPDLFEAYDNIG 977


>gi|254413092|ref|ZP_05026864.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180256|gb|EDX75248.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 1179

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 142/342 (41%), Gaps = 37/342 (10%)

Query: 56  TKQREKEEHFILATQYYNKASR-IDMHEPST----------------WVGKGQLLLAKGE 98
           TK  + E  +ILA  Y   A R + + EP+T                W G+G  L     
Sbjct: 64  TKTLDIEPCYILALAYRGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELKR 123

Query: 99  VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
            E+A  +F   +E + D   A  G+       G+Y +++  Y +AL+++P     I    
Sbjct: 124 YEEAIVSFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKALEINPD-DYKIWGNR 182

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           GL    LG+   A  ++ +A++++P N +   A     L  N        +    +A EI
Sbjct: 183 GLALNNLGKYEDAIASYDKAIEINPNNYK---AWGKRGLALNNLGKYEDAIASYDKAIEI 239

Query: 219 YP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR---SYHSK 273
            P  Y +  L   A           +E+  E   ++       SH YY   R        
Sbjct: 240 NPGEYGSWILRSFALD--------KLEKYEEVVTSLDQALKINSHEYYAWNRRAIGLDKL 291

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G +E+A   Y  ++K IN P ++   +   G V  KLG +  A+++ ++ L+I PD    
Sbjct: 292 GKHEEAIASYDKAIK-IN-PDDYT-AWRNKGFVLHKLGKYEEAISSLDQALKINPDQYYF 348

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
               G    +LG+  +A     +A +I+P D  A+I+ G  L
Sbjct: 349 CILRGCALDKLGKYSEALASYNQAIQINPDDYTAWINRGSAL 390



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 138/313 (44%), Gaps = 26/313 (8%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y+KA +I+  + + W  KG +L   G+ E+A S+    L+ + D     + + C     G
Sbjct: 301 YDKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLG 360

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--L 189
           +YS++L  Y +A+Q++P    A  +  G    KLG+  +A  ++ +AL+++ +   A  L
Sbjct: 361 KYSEALASYNQAIQINPDDYTA-WINRGSALDKLGKYSEALASYNQALEINSDEYSAWNL 419

Query: 190 VALAVMDLQANEAA--GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
               + +L   E A     K +E     +  +    +ALN L  +              E
Sbjct: 420 RGKTLNNLGKYEEAITSFDKVIEINSDDYTAWVNRGLALNELGKY--------------E 465

Query: 248 TALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            ALA  +      P + +++ N   +  + G YEKA   Y  ++ EIN P  +       
Sbjct: 466 KALASYDKALEINPNEYYTWNNQGNALFNLGKYEKALASYDKAL-EIN-PDGYTVLNNRS 523

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G V   LG +   +T+ ++ +EI PD        G     LGQ E+A     KA +I+P 
Sbjct: 524 G-VLCNLGKYSEMITSCDQAIEINPDYYMAWSNRGFGLYNLGQYEEALASCNKAIEINPD 582

Query: 364 DAQAFIDLGELLI 376
              A+ + G  L 
Sbjct: 583 YYMAWSNRGWALF 595



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 46/326 (14%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN+A  I+  E S W  +G+ L   G+ E+A ++F  V+E + D+  A + +       G
Sbjct: 403 YNQALEINSDEYSAWNLRGKTLNNLGKYEEAITSFDKVIEINSDDYTAWVNRGLALNELG 462

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           +Y  +L  Y +AL+++P+         G   + LG+  KA  ++ +AL+++P+    L  
Sbjct: 463 KYEKALASYDKALEINPNEYYTWN-NQGNALFNLGKYEKALASYDKALEINPDGYTVL-- 519

Query: 192 LAVMDLQANEAAGIRKGMEKMQ-------RAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
                   N  +G+   + K         +A EI P   MA +      +  GQ+     
Sbjct: 520 --------NNRSGVLCNLGKYSEMITSCDQAIEINPDYYMAWSNRGFGLYNLGQY----- 566

Query: 245 LTETALAVTNHGPTKSHSYY----NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP- 299
             E ALA  N     +  YY    N   +      Y+KA   +   +K +N       P 
Sbjct: 567 --EEALASCNKAIEINPDYYMAWSNRGWALFKLKRYQKAFKNWKDGIKNLN----LDTPE 620

Query: 300 --------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
                   YY   Q   +LG   + L N  +  + Y    + LK L     +  ++E  Q
Sbjct: 621 HREGRSKLYYSEAQAYYQLGLKEADLDNLLQAKKYY---NKALKFLDTPKYRAQKLEIMQ 677

Query: 352 ELLRKAAKID-PRDAQAFIDLGELLI 376
           +L++    I  P++ Q  ++ G  L+
Sbjct: 678 DLIQVCQYISTPKEVQELLNQGTDLL 703



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 84/403 (20%), Positives = 164/403 (40%), Gaps = 68/403 (16%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y+KA  I+  +   W  +G  L   G+ E A +++   +E + +N  A   +     N G
Sbjct: 165 YDKALEINPDDYKIWGNRGLALNNLGKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLG 224

Query: 132 RYSDSLEFYKRALQVHPSCPGAI-----------------------------------RL 156
           +Y D++  Y +A++++P   G+                                    R 
Sbjct: 225 KYEDAIASYDKAIEINPGEYGSWILRSFALDKLEKYEEVVTSLDQALKINSHEYYAWNRR 284

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            IGL   KLG+  +A  ++ +A++++P++  A      +    ++     + +  + +A 
Sbjct: 285 AIGLD--KLGKHEEAIASYDKAIKINPDDYTAWRNKGFV---LHKLGKYEEAISSLDQAL 339

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLARSY 270
           +I P           ++F   +   +++L + + A+ ++       P    ++ N   + 
Sbjct: 340 KINP---------DQYYFCILRGCALDKLGKYSEALASYNQAIQINPDDYTAWINRGSAL 390

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-GQVQLKLGDFRSALTNFEKVLEIYPD 329
              G Y +A   Y  ++ EIN      +  + L G+    LG +  A+T+F+KV+EI  D
Sbjct: 391 DKLGKYSEALASYNQAL-EINSDE---YSAWNLRGKTLNNLGKYEEAITSFDKVIEINSD 446

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
           +       G    +LG+ EKA     KA +I+P +   + + G  L +      L  ++ 
Sbjct: 447 DYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNNQGNALFN------LGKYEK 500

Query: 390 ARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A     KA E  P    VLNN   +    G++     S   A+
Sbjct: 501 ALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAI 543



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 26/263 (9%)

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
           DN+  LL Q   + +RG+  ++L+ +++A Q  P  P  +  G+GL  Y+L Q  ++   
Sbjct: 4   DNIAVLLQQGHEQLDRGQNQEALQIFQQAEQREPENPQVL-FGLGLACYRLEQYQESVDY 62

Query: 175 FQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
             + L ++P  + AL    +A   + L+    A   + +++    ++ +    +AL+ L 
Sbjct: 63  LTKTLDIEPCYILALAYRGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELK 122

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY----NLARSYHSKGDYEKAGLYYMAS 286
            +              E A+   +     +  YY        +    G YE A   Y  +
Sbjct: 123 RY--------------EEAIVSFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKA 168

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
           + EIN     I+   GL      LG +  A+ +++K +EI P+N +     G     LG+
Sbjct: 169 L-EINPDDYKIWGNRGLALN--NLGKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLGK 225

Query: 347 IEKAQELLRKAAKIDPRDAQAFI 369
            E A     KA +I+P +  ++I
Sbjct: 226 YEDAIASYDKAIEINPGEYGSWI 248


>gi|386002705|ref|YP_005921004.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
 gi|357210761|gb|AET65381.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
          Length = 660

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 152/356 (42%), Gaps = 28/356 (7%)

Query: 79  DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           D  + + W  +G +L   G  E+A  +F   L AD   + A   +     N GR  ++LE
Sbjct: 266 DPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPGYLLAWNNRGLALANLGRSEEALE 325

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 198
            Y R++ + PS   A     G   + L +  +A +A+  AL+++P       ALA  +  
Sbjct: 326 SYNRSIDIDPSFALAW-YNRGRALFDLERYDEAVEAYDSALEVEPA-----FALAWNNRG 379

Query: 199 ANEAAGIR--KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL----AV 252
           A  AA  R  + +E   RA EI P   +A     +  +  G++F   +  + A+      
Sbjct: 380 AALAALGREEEALESYDRALEIDPGYEIAWYNRGSVLYLEGRYFDAIKAFDEAIRFNPTS 439

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
            +   +K H+ Y + R   +   YEKA         E++      + + G+    L    
Sbjct: 440 ADAWHSKGHALYQMRRPGEALVCYEKA--------LELDPGRAETWHHRGVALADLNRA- 490

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
              A   F++ LE+ P+        G +    G+ E+A     +AA++DP  A+A+ + G
Sbjct: 491 -AEAAEAFDRALELDPEYEPPWYRKGILAYSSGRPEEALAHFTRAAELDPGHAEAWNNRG 549

Query: 373 ELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
            +L +  DT  AL++   A        +    E  NN GV+    G+ E A +++ 
Sbjct: 550 WILFTLGDTDEALESIDRALE-----ADTALAEGWNNRGVVLTALGKNEEALEAYN 600



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 147/371 (39%), Gaps = 30/371 (8%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y  A  ID     +W G  +LL A G  E+A +     + AD  +  A   +  + 
Sbjct: 221 ALECYASALAIDSGLVGSWKGAAELLRALGRDEEALARLDGAVGADPGDKAAWNDRGLIL 280

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              GRY +++E +  AL+  P    A     GL    LG+  +A +++ R++ +DP    
Sbjct: 281 GVLGRYEEAVESFDAALRADPGYLLAWN-NRGLALANLGRSEEALESYNRSIDIDPSFAL 339

Query: 188 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A      A+ DL+  + A     +E    A E+ P  A+A N         G+     + 
Sbjct: 340 AWYNRGRALFDLERYDEA-----VEAYDSALEVEPAFALAWNNRGAALAALGREEEALES 394

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYY 301
            + AL +    P    ++YN     + +G Y  A       +K  ++   F       ++
Sbjct: 395 YDRALEID---PGYEIAWYNRGSVLYLEGRYFDA-------IKAFDEAIRFNPTSADAWH 444

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             G    ++     AL  +EK LE+ P   ET    G     L +  +A E   +A ++D
Sbjct: 445 SKGHALYQMRRPGEALVCYEKALELDPGRAETWHHRGVALADLNRAAEAAEAFDRALELD 504

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEF 419
           P     +   G L  SS         + A     +A E  P   E  NN G I F  G+ 
Sbjct: 505 PEYEPPWYRKGILAYSSGRP------EEALAHFTRAAELDPGHAEAWNNRGWILFTLGDT 558

Query: 420 ESAHQSFKDAL 430
           + A +S   AL
Sbjct: 559 DEALESIDRAL 569



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 124/317 (39%), Gaps = 52/317 (16%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           E +  A + Y+ A  ++      W  +G  L A G  E+A  ++   LE D     A   
Sbjct: 352 ERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYN 411

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +  V +  GRY D+++ +  A++ +P+   A     G   Y++ + G+A   +++AL+LD
Sbjct: 412 RGSVLYLEGRYFDAIKAFDEAIRFNPTSADAWH-SKGHALYQMRRPGEALVCYEKALELD 470

Query: 183 PENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 238
           P   E      VALA ++ +A EAA      E   RA E+                    
Sbjct: 471 PGRAETWHHRGVALADLN-RAAEAA------EAFDRALEL-------------------- 503

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
                             P     +Y      +S G  E+A L +     E++  H    
Sbjct: 504 -----------------DPEYEPPWYRKGILAYSSGRPEEA-LAHFTRAAELDPGHAEA- 544

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            +   G +   LGD   AL + ++ LE      E     G +   LG+ E+A E   +  
Sbjct: 545 -WNNRGWILFTLGDTDEALESIDRALEADTALAEGWNNRGVVLTALGKNEEALEAYNRTI 603

Query: 359 KIDPRDAQAFIDLGELL 375
            IDP   +A+ + G  L
Sbjct: 604 DIDPAHPRAWNNKGASL 620



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 1/116 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  ++ +A+ +D      W  +G +L   G+ ++A  +    LEAD         +  V 
Sbjct: 527 ALAHFTRAAELDPGHAEAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNNRGVVL 586

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
              G+  ++LE Y R + + P+ P A     G   Y LG+  +A   + RAL+LDP
Sbjct: 587 TALGKNEEALEAYNRTIDIDPAHPRAWN-NKGASLYHLGRYREAADCYGRALELDP 641



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 145/368 (39%), Gaps = 44/368 (11%)

Query: 43  ALGVYYTYLGKIETKQREKEEHFI-LATQYYNKASRIDMHEPSTWVGKGQLLLAK-GEVE 100
           ALG   +  G +E  +R ++E  I LA    +++  +D      WV +G++ L    + E
Sbjct: 58  ALGDEESAEGWLEEAERYRQEGAIDLALSSLDRSLALDPDLAEAWVLRGEIALYNLTDRE 117

Query: 101 QASSAFKIVLEADRDN--VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 158
            A  AF+  L  D ++  V   LG A      GR  ++L+ Y R+L + P   G      
Sbjct: 118 MAVEAFERALGIDPEDGVVWYELGNALSFL--GRVDEALQAYNRSLTIDPEN-GKAWNNR 174

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPE-------NVEALVALA----VMDLQANEAA---- 203
           GL    LG+  +A  +F+RA+  DP+          AL AL      ++  A+  A    
Sbjct: 175 GLILGALGRYEEAASSFERAISSDPDLAAAWQNRGNALRALGRPEEALECYASALAIDSG 234

Query: 204 --GIRKGMEKMQRAF--------------EIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
             G  KG  ++ RA                  P    A N   +     G     E+  E
Sbjct: 235 LVGSWKGAAELLRALGRDEEALARLDGAVGADPGDKAAWN---DRGLILGVLGRYEEAVE 291

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
           +  A     P    ++ N   +  + G  E+A   Y    + I+    F   +Y  G+  
Sbjct: 292 SFDAALRADPGYLLAWNNRGLALANLGRSEEALESYN---RSIDIDPSFALAWYNRGRAL 348

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             L  +  A+  ++  LE+ P         G     LG+ E+A E   +A +IDP    A
Sbjct: 349 FDLERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRALEIDPGYEIA 408

Query: 368 FIDLGELL 375
           + + G +L
Sbjct: 409 WYNRGSVL 416



 Score = 43.9 bits (102), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 8/170 (4%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y KA  +D     TW  +G  L       +A+ AF   LE D +  P    +  + ++ G
Sbjct: 463 YEKALELDPGRAETWHHRGVALADLNRAAEAAEAFDRALELDPEYEPPWYRKGILAYSSG 522

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-- 189
           R  ++L  + RA ++ P    A     G   + LG   +A ++  RAL+ D    E    
Sbjct: 523 RPEEALAHFTRAAELDPGHAEAWN-NRGWILFTLGDTDEALESIDRALEADTALAEGWNN 581

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
             + +  L  NE A     +E   R  +I P    A N      +  G++
Sbjct: 582 RGVVLTALGKNEEA-----LEAYNRTIDIDPAHPRAWNNKGASLYHLGRY 626



 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYV-QLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           AL++ ++ L + PD  E     G I +  L   E A E   +A  IDP D   + +LG  
Sbjct: 84  ALSSLDRSLALDPDLAEAWVLRGEIALYNLTDREMAVEAFERALGIDPEDGVVWYELGNA 143

Query: 375 L-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           L        AL A+  + T+  + G     +  NN G+I    G +E A  SF+ A+
Sbjct: 144 LSFLGRVDEALQAYNRSLTIDPENG-----KAWNNRGLILGALGRYEEAASSFERAI 195


>gi|332710566|ref|ZP_08430511.1| serine/threonine protein kinase [Moorea producens 3L]
 gi|332350621|gb|EGJ30216.1| serine/threonine protein kinase [Moorea producens 3L]
          Length = 726

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 130/293 (44%), Gaps = 18/293 (6%)

Query: 84  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           + W  +G+  L     EQA  A+   +E   +  PA  GQ    F    Y ++L  Y +A
Sbjct: 347 TDWYNQGETFLELKRYEQALDAYNRAVEIRGEYAPAWQGQGKTLFALKYYEEALNAYDQA 406

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA---- 199
           +Q+ P    A + G G    +L +   A +AF  AL+L P +++A ++L  + +++    
Sbjct: 407 IQIEPDYSAAWK-GRGKTLEQLERYDAAIKAFNSALELQPNDLDAWISLGNVQVKSKNYF 465

Query: 200 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
           +  A   K ++    +++ +     AL+ L  +          +   E+     ++ P  
Sbjct: 466 DAIASFDKALKLKPDSYQAWYRRGWALHNLRRY----------KAAVESYDRALDYKPNS 515

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           + ++Y       +   Y+ A   Y  +V+   +P+ F   +Y  G    +LG ++ AL +
Sbjct: 516 AEAWYQRGNDLSNLRKYKDAAKSYQQAVQ--FQPN-FYQAWYSWGNTLNQLGKYQEALGS 572

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           F++ +++ P + +   + G    Q+ + E A E   KA K+  +  QA+   G
Sbjct: 573 FDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRG 625



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 18/295 (6%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y++A +I+    + W G+G+ L      + A  AF   LE   +++ A +    V+    
Sbjct: 403 YDQAIQIEPDYSAAWKGRGKTLEQLERYDAAIKAFNSALELQPNDLDAWISLGNVQVKSK 462

Query: 132 RYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
            Y D++  + +AL++ P S     R G  L  + L +   A +++ RAL   P + EA  
Sbjct: 463 NYFDAIASFDKALKLKPDSYQAWYRRGWAL--HNLRRYKAAVESYDRALDYKPNSAEAWY 520

Query: 191 ALAVMDLQANEAAGIRK---GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                  + N+ + +RK     +  Q+A +  P    A     N     G++   E L  
Sbjct: 521 Q------RGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKY--QEALGS 572

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
              AV    P    ++Y+   + H    YE A   Y  ++K  +KP++    +Y  G   
Sbjct: 573 FDQAVKLQ-PKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQ---AWYSRGNTF 628

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            KL  ++ A+ ++++ +   PD  +   +LG+  V+  + +KA     KA +  P
Sbjct: 629 YKLERYKDAIASYQQAVNYKPDYSQAWYSLGNALVKRNKYKKAIAAYDKAVRYQP 683


>gi|425449789|ref|ZP_18829622.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           7941]
 gi|389769649|emb|CCI05556.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           7941]
          Length = 569

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 27/300 (9%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   
Sbjct: 41  YLWQGDRLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYNRGFI 100

Query: 146 VHPSCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQ- 198
           V+   P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ 
Sbjct: 101 VNHKPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAMIIKPTFKAQFQLGKALYSLQR 160

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-- 256
            +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A         
Sbjct: 161 WDEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALE 207

Query: 257 --PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P +   Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G   
Sbjct: 208 LIPNQGEIYKKLGETLAKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLG 264

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+  F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 265 EAMAVFQQARQISPKNAKIYQNLCYIYINNGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|425434175|ref|ZP_18814646.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
 gi|389677169|emb|CCH93904.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
          Length = 736

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 31/338 (9%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P       LG G  
Sbjct: 380 ALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLGRGEA 439

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM----QRAFE 217
             KL +  +A ++F+R L L+P   +A    A + L+  + +  +K +EK+    Q   +
Sbjct: 440 LDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQNDAK 499

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKSHSYYNLARSYHSK 273
           I+     +L  L +   + G     +Q    ALA+ +        K +S Y L +  ++ 
Sbjct: 500 IWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKGNSLYQLNKINNAL 552

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
             Y KAG +          P +F   YY  G +  KLG    AL  F +  +   +  + 
Sbjct: 553 ESYSKAGQF---------NP-QFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQA 602

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 392
               G +  QL + ++A     KA +I  R ++ FI +G       D   A+ A++ A  
Sbjct: 603 WLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQ 662

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 663 RQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 695



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 68/325 (20%), Positives = 131/325 (40%), Gaps = 50/325 (15%)

Query: 35  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 94
           YE+   +N    +  +LG+ E   +  +    L +  + +   ++      W GK  + L
Sbjct: 418 YEKAIQINPDSAWQAWLGRGEALDKLDKNQEALES--FERVLSLNPAASQAWQGKADIYL 475

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
              +   A  A + +L   +++      +     N   Y  +++ Y +AL +  S    I
Sbjct: 476 ELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIE-SDNALI 534

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
               G   Y+L ++  A +++ +A Q +P+  +A  +  ++             ++K+ R
Sbjct: 535 WYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGII-------------LQKLGR 581

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             E       A    +N++                 A  N G       + L R   +  
Sbjct: 582 NSEALEAFTQATKANSNYY----------------QAWLNQGAL----LHQLERFQEAIA 621

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
            YEKA        + I+     +F   G+G    +LGD+  A+T +++ ++   DN ET 
Sbjct: 622 SYEKA--------RRISSRKSEVF--IGIGNACYRLGDYSQAITAYQQAIQRQKDNPETW 671

Query: 335 KALGHIYVQLGQIEKA----QELLR 355
           K+LG+ + +LGQ E+A    QE LR
Sbjct: 672 KSLGNSWFKLGQYERAIQAYQESLR 696


>gi|167581033|ref|ZP_02373907.1| TPR domain protein [Burkholderia thailandensis TXDOH]
          Length = 614

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G ++ A   ++  L  +  N  AL     +   +GR+ ++ +   RA+++ P+   A++L
Sbjct: 15  GRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAVELRPND-AALQL 73

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK--GMEKMQR 214
            +G     LG+L  A + F+ AL L PE       LA  +L    AA  R    ++  QR
Sbjct: 74  NLGNAFKALGRLDDAIERFRNALTLAPE-----FPLAHYNLGNAYAAQERHDDAVDAFQR 128

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           A  + P  A   N L N     G+H         AL +    P  + ++ NL  +  + G
Sbjct: 129 ALALAPGDASIHNNLGNALNALGRHGDALAAFRRALELR---PGHAGAHNNLGMALAALG 185

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           D E+A  ++ A++    +   F+  ++ LG     +G    AL+ FE  L + P     L
Sbjct: 186 DTEEAVAHFRAALAAEPR---FVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLAL 242

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             L +    LG+   A     +A  +DP    A+++LG
Sbjct: 243 FGLANALAALGRHRDALPHYERAVGLDPSFVLAWLNLG 280



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 18/236 (7%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIY 219
           ++ G+L  A   ++ AL  +P N +AL    V+  Q     EAA +      + RA E+ 
Sbjct: 12  HRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADL------VGRAVELR 65

Query: 220 PY-CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
           P   A+ LN L N F   G+   ++   E         P    ++YNL  +Y ++  ++ 
Sbjct: 66  PNDAALQLN-LGNAFKALGR---LDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDD 121

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A   +  ++            +  LG     LG    AL  F + LE+ P +      LG
Sbjct: 122 AVDAFQRALALAPGDASI---HNNLGNALNALGRHGDALAAFRRALELRPGHAGAHNNLG 178

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
                LG  E+A    R A   +PR   A  +LG  L +    A AL AF++A  L
Sbjct: 179 MALAALGDTEEAVAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALAL 234



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 42  NALGVYYTYLGKIETKQREKEEHF--ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 99
           N LG+    LG  E    E   HF   LA +    A+  ++         G  L A G  
Sbjct: 175 NNLGMALAALGDTE----EAVAHFRAALAAEPRFVAAHFNL---------GNALDAVGRH 221

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            QA SAF+  L        AL G A      GR+ D+L  Y+RA+ + PS   A  L +G
Sbjct: 222 AQALSAFESALALQPRFPLALFGLANALAALGRHRDALPHYERAVGLDPSFVLAW-LNLG 280

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEA 188
              + LG    A +AF +AL+LDP +  A
Sbjct: 281 TAHHALGAHEMALRAFDQALRLDPSHALA 309



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 122/303 (40%), Gaps = 20/303 (6%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           GR  D+   Y+ AL  +P+   A+ L  G+ R++ G+  +A     RA++L P +     
Sbjct: 15  GRLDDAEHGYRAALATNPANADALHL-FGVLRHQQGRHEEAADLVGRAVELRPNDA---- 69

Query: 191 ALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
           AL +    A +A G +   +E+ + A  + P   +A   L N +    +H       + A
Sbjct: 70  ALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRA 129

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
           LA+    P  +  + NL  + ++ G +  A L       E+   H     +  LG     
Sbjct: 130 LALA---PGDASIHNNLGNALNALGRHGDA-LAAFRRALELRPGHAGA--HNNLGMALAA 183

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           LGD   A+ +F   L   P        LG+    +G+  +A      A  + PR   A  
Sbjct: 184 LGDTEEAVAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLALF 243

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFK 427
            L   L      AAL   + A    ++A    P  VL   N+G  H   G  E A ++F 
Sbjct: 244 GLANAL------AALGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFD 297

Query: 428 DAL 430
            AL
Sbjct: 298 QAL 300


>gi|425436150|ref|ZP_18816588.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9432]
 gi|389679151|emb|CCH92011.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9432]
          Length = 569

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 27/300 (9%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   
Sbjct: 41  YLWQGDRLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDRGFI 100

Query: 146 VHPSCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQ- 198
           V+   P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ 
Sbjct: 101 VNHKPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAMIIKPTFKAQFQLGKALYSLQR 160

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-- 256
            +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A         
Sbjct: 161 WDEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALE 207

Query: 257 --PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P +   Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G   
Sbjct: 208 LIPNQGEIYKKLGETLAKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLG 264

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+  F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 265 EAMAVFQQARQISPKNAKIYQNLCYIYINNGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|294085101|ref|YP_003551861.1| hypothetical protein [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292664676|gb|ADE39777.1| putative TPR repeat protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 734

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 126/287 (43%), Gaps = 24/287 (8%)

Query: 112 ADRDNVPALLGQACVE-FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
           A +D+ PA   QA +  +N+G  + +    + ALQ  P     + L +G      G+L  
Sbjct: 7   AAKDDPPATQVQALIALYNQGEMAQTERQCRMALQEFPRSVTLLNL-LGAAFQTQGKLDF 65

Query: 171 ARQAFQRALQLDPENVE-----ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           A  AF +A+ L+P++ +      +V LA+       A  ++        A ++ P    A
Sbjct: 66  AASAFVKAIALNPKDAQLHNNYGVVLLALSSFDTARACFLK--------ALKLTPDYVEA 117

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
            N L N     GQ  L   LT    A+    PT   ++YN   +         A    +A
Sbjct: 118 HNNLGNALRSLGQ--LDAALTRYNKAIAIQ-PTYGQAHYNRGVTLQQMQQMTAA----LA 170

Query: 286 SVKE-INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
           S ++ +    EFI  +   G +  +LG    A+T++E  L I PD+ ET   +G IY   
Sbjct: 171 SYEDALAVQPEFIEAHINRGVIFQQLGKADDAITSYELALTIDPDHAETHNNMGIIYAGT 230

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTA 390
           G  E+AQ    KA  + P   + +I+L  +L  +  T AA+   +TA
Sbjct: 231 GDHERAQTYYEKALALKPDYVEGYINLATMLFETGHTAAAIAHLETA 277



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 143/373 (38%), Gaps = 57/373 (15%)

Query: 38  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
           + +LN LG  +   GK++            A   + KA  ++  +       G +LLA  
Sbjct: 47  VTLLNLLGAAFQTQGKLD-----------FAASAFVKAIALNPKDAQLHNNYGVVLLALS 95

Query: 98  EVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
             + A + F   L+   D V A   LG A      G+   +L  Y +A+ + P+  G   
Sbjct: 96  SFDTARACFLKALKLTPDYVEAHNNLGNALRSL--GQLDAALTRYNKAIAIQPTY-GQAH 152

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
              G+   ++ Q+  A  +++ AL + PE +EA +   V+  Q  +A      +   + A
Sbjct: 153 YNRGVTLQQMQQMTAALASYEDALAVQPEFIEAHINRGVIFQQLGKA---DDAITSYELA 209

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV-----------------TNHGPT 258
             I P  A   N +   +  TG H   +   E ALA+                 T H   
Sbjct: 210 LTIDPDHAETHNNMGIIYAGTGDHERAQTYYEKALALKPDYVEGYINLATMLFETGHTAA 269

Query: 259 K----------------SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
                            +H+ Y L +   ++GD   A   Y  ++ +   P +F  P+  
Sbjct: 270 AIAHLETALGYDANDAMAHNLYGLLKK--AQGDVVGALASYATAIAQ--NP-DFAEPHIN 324

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G    + G   SAL  F++ ++I PD+ E          +LG+ + A     +A  + P
Sbjct: 325 TGLALQQSGAHASALAAFDRAIKINPDHAEAYNNKAVTLQELGRFDAALASYDQAITLAP 384

Query: 363 RDAQAFIDLGELL 375
             A A+ +   L+
Sbjct: 385 DYALAYFNRSNLI 397



 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 62/158 (39%), Gaps = 30/158 (18%)

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G V L L  F +A   F K L++ PD  E    LG+    LGQ++ A     KA  I P 
Sbjct: 88  GVVLLALSSFDTARACFLKALKLTPDYVEAHNNLGNALRSLGQLDAALTRYNKAIAIQPT 147

Query: 364 DAQAFIDLGELLIS-SDTGAALDAFKTARTL-----------------LKKAGEEVP--- 402
             QA  + G  L       AAL +++ A  +                 L KA + +    
Sbjct: 148 YGQAHYNRGVTLQQMQQMTAALASYEDALAVQPEFIEAHINRGVIFQQLGKADDAITSYE 207

Query: 403 ---------IEVLNNIGVIHFEKGEFESAHQSFKDALG 431
                     E  NN+G+I+   G+ E A   ++ AL 
Sbjct: 208 LALTIDPDHAETHNNMGIIYAGTGDHERAQTYYEKALA 245


>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
           repeats [uncultured archaeon]
          Length = 425

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 22/307 (7%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + +NK   +D +    +  +G       + E+A   F   +E D +   A   +    
Sbjct: 118 AIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNNRGTAY 177

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            +  +Y  ++E + + +++ P  P A     GL    L Q  +A + F + ++LDP +  
Sbjct: 178 SDLKQYERAIEDFNKTIELIPDYPFAYS-NRGLTYDNLKQYERAIEDFNKTIELDPNSAA 236

Query: 188 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A     L   +L+  E     + +E   +  E+ P    A N     +    Q+   E+ 
Sbjct: 237 AYNNRGLTYDNLKQYE-----RAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQY---ERA 288

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE----FIFPYY 301
            E         P  + +Y N   +Y    +YE+A       +++ NK  E    +   YY
Sbjct: 289 IEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERA-------IEDFNKTIELDSNYAGSYY 341

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
             G     L  +  A+ +F K +E+ P++       G+ +  LGQ E+A E   KA ++D
Sbjct: 342 NRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDYNKAIELD 401

Query: 362 PRDAQAF 368
           P D  A+
Sbjct: 402 PNDTDAY 408



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 24/294 (8%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W  K       GE ++A   F  V+E + ++  +   +  V     +Y  ++E + + ++
Sbjct: 34  WHNKAIGFAMSGEYKKAIECFDKVIELNPNSAGSYYNRGLVYKILKQYERAIEDFNKTIE 93

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAA 203
           + P+  GA  +  G     L Q  +A + F + ++LDP    A      A  DL+  E  
Sbjct: 94  LIPTFAGAY-INRGDAYKNLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYE-- 150

Query: 204 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH-FLVEQLTETALAVTNHGPTKSHS 262
              + +E   +  E+ P  A+A N     +    Q+   +E   +T   +    P    +
Sbjct: 151 ---RAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELI----PDYPFA 203

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYYGLGQVQLKLGDFRSALT 318
           Y N   +Y +   YE+A       +++ NK  E        Y   G     L  +  A+ 
Sbjct: 204 YSNRGLTYDNLKQYERA-------IEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIE 256

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           +F K +E+ P++       G  Y  L Q E+A E   K  ++DP  A A+ + G
Sbjct: 257 DFNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRG 310



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 117/309 (37%), Gaps = 66/309 (21%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G Y  ++E + + ++++P+  G+     GL    L Q  +A + F + ++L P    A +
Sbjct: 45  GEYKKAIECFDKVIELNPNSAGSY-YNRGLVYKILKQYERAIEDFNKTIELIPTFAGAYI 103

Query: 191 --ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
               A  +L+  E     + +E   +  E+ P  A+A N                     
Sbjct: 104 NRGDAYKNLKQYE-----RAIEDFNKTIELDPNYALAYN--------------------- 137

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL----- 303
                           N   +Y     YE+A       +++ NK  E + P Y L     
Sbjct: 138 ----------------NRGTAYSDLKQYERA-------IEDFNKTIE-LDPNYALAYNNR 173

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G     L  +  A+ +F K +E+ PD        G  Y  L Q E+A E   K  ++DP 
Sbjct: 174 GTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELDPN 233

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFES 421
            A A+ + G   ++ D    L  ++ A     K  E +P      NN G+ +    ++E 
Sbjct: 234 SAAAYNNRG---LTYDN---LKQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQYER 287

Query: 422 AHQSFKDAL 430
           A + F   +
Sbjct: 288 AIEDFNKTI 296


>gi|386829523|ref|ZP_10116630.1| hypothetical protein BegalDRAFT_3419 [Beggiatoa alba B18LD]
 gi|386430407|gb|EIJ44235.1| hypothetical protein BegalDRAFT_3419 [Beggiatoa alba B18LD]
          Length = 1217

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 41/276 (14%)

Query: 128 FNRGRYSDSLEFYKRAL-----QVHPSCPGAIRLGIGLCR--YKLGQLGKARQAFQRALQ 180
           ++ G Y +S   Y+R+L     Q+ P  P        L    Y +G   +A++ ++RAL+
Sbjct: 411 YDMGDYPNSKALYERSLAIREAQLSPEHPDIALSLNNLALLYYSMGNYDEAKKRYERALE 470

Query: 181 --------LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-----YPYCAMALN 227
                   + PE  ++L  LA++     + A  +K  E+     E      +P  A+A N
Sbjct: 471 IREKVYGRMHPEVAQSLNNLALLYYSTGDYAQSKKFYEESLNIVEAVYGKAHPDVALAYN 530

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS-----YYNLARSYHSKGDYEKAGLY 282
            LA  ++  G +   + + E AL++      ++++       NLA  Y+S GDYE+A  +
Sbjct: 531 NLALLYYNIGNYAEAKPMYEKALSIWTKTLGENNTDVALCLNNLALIYYSTGDYEQAEKH 590

Query: 283 YMASV----KEINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPD 329
           Y  S+    K + K H  +      +G +   LGD+  A   +E+ L I        +PD
Sbjct: 591 YKRSLNIWEKVLGKDHPRVALSLNNIGWLYYSLGDYAKAKPYYERALTIREKALGKEHPD 650

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKA---AKIDP 362
             ++L  LG +  QLG   +A+ L  +A   A I+P
Sbjct: 651 IAQSLNGLGELNQQLGNFVEAKILFERALPLASIEP 686



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 34/242 (14%)

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDY 276
            A  LN LA  +   G++   E L   ALA+      +     + S  NLA  Y+   +Y
Sbjct: 147 IATTLNTLAETYRLVGRYTEAEPLHRRALAIRQKLLGDDVLETTTSMNNLALLYYETSEY 206

Query: 277 EKAGLYYMASVKEINK----PHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI----- 326
            KA   Y  ++K   +     H ++      L  +   +G+F+ A+  +E VL I     
Sbjct: 207 NKARPLYEKALKIRRRIWGDEHNYVALSADNLALLYWSMGEFKQAIPLYELVLSIREKNI 266

Query: 327 ---YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA----QAFIDLGELLISSD 379
               PD   TL  L  +Y Q G+  +A+ L  +A KI  R+A    QA + L  L   ++
Sbjct: 267 GKDSPDVAVTLNNLAEVYRQTGKYPQARPLYERALKI--REAVYGEQASVTLESLNNLAE 324

Query: 380 TGAALDAFKTARTLLKKA----------GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
                  ++ A  L KK+          G       LNN+G++++  G F  +   ++++
Sbjct: 325 LYRQTGVYQQAEELHKKSLALREAVYGRGSLETTVALNNLGLLYYNMGRFSDSKPLYEES 384

Query: 430 LG 431
           L 
Sbjct: 385 LA 386



 Score = 46.6 bits (109), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)

Query: 128 FNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           ++ G Y ++ + Y+RAL++        HP    ++   + L  Y  G   ++++ ++ +L
Sbjct: 453 YSMGNYDEAKKRYERALEIREKVYGRMHPEVAQSLN-NLALLYYSTGDYAQSKKFYEESL 511

Query: 180 QL--------DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY--------CA 223
            +         P+   A   LA++       A  +   EK   A  I+           A
Sbjct: 512 NIVEAVYGKAHPDVALAYNNLALLYYNIGNYAEAKPMYEK---ALSIWTKTLGENNTDVA 568

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH-----SYYNLARSYHSKGDYEK 278
           + LN LA  ++ TG +   E+  + +L +      K H     S  N+   Y+S GDY K
Sbjct: 569 LCLNNLALIYYSTGDYEQAEKHYKRSLNIWEKVLGKDHPRVALSLNNIGWLYYSLGDYAK 628

Query: 279 AGLYYMASV----KEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           A  YY  ++    K + K H  I     GLG++  +LG+F  A   FE+ L +     E 
Sbjct: 629 AKPYYERALTIREKALGKEHPDIAQSLNGLGELNQQLGNFVEAKILFERALPLASIEPEL 688

Query: 334 LKALGHIYVQL 344
           L  + + Y +L
Sbjct: 689 LWKIQNHYSRL 699



 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 131/338 (38%), Gaps = 86/338 (25%)

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR-------YKLGQLGKA 171
           AL     + +N GR+SDS   Y+ +L           L I L         Y +G    +
Sbjct: 360 ALNNLGLLYYNMGRFSDSKPLYEESLATREKLLPPDHLYISLSLNNLALLYYDMGDYPNS 419

Query: 172 RQAFQRAL-----QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-------- 218
           +  ++R+L     QL PE+ +  ++L  + L         +  ++ +RA EI        
Sbjct: 420 KALYERSLAIREAQLSPEHPDIALSLNNLALLYYSMGNYDEAKKRYERALEIREKVYGRM 479

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH-----SYYNLARSYHSK 273
           +P  A +LN LA  ++ TG +   ++  E +L +      K+H     +Y NLA  Y++ 
Sbjct: 480 HPEVAQSLNNLALLYYSTGDYAQSKKFYEESLNIVEAVYGKAHPDVALAYNNLALLYYNI 539

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL-EIYPDNCE 332
           G+Y +A            KP                   +  AL+ + K L E   D   
Sbjct: 540 GNYAEA------------KPM------------------YEKALSIWTKTLGENNTDVAL 569

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
            L  L  IY   G  E+A++  +++           +++ E ++  D           R 
Sbjct: 570 CLNNLALIYYSTGDYEQAEKHYKRS-----------LNIWEKVLGKDH---------PRV 609

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            L           LNNIG +++  G++  A   ++ AL
Sbjct: 610 ALS----------LNNIGWLYYSLGDYAKAKPYYERAL 637


>gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 1737

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 153/340 (45%), Gaps = 44/340 (12%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--I 108
           LG ++ KQ + E+    A   Y++A +I+ +    ++  G  L+ KG + +A + F+  I
Sbjct: 86  LGNVQEKQGQLEQ----AIASYSQAIKINPNFSELYISLGSALVQKGLLYEAIANFQKAI 141

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQ 167
            LE +       LG A  +  +G+  + +  Y++A+++ P    G  +LGI L   K G+
Sbjct: 142 SLEPESSIAHQNLGVALEK--QGQIEEGIICYRKAIEIDPGFWEGYQKLGIALT--KQGE 197

Query: 168 LGKARQAFQRALQLDPENV-------EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
             +A + + +A Q+ P +        E L  L   D      A  R+ ++    +  IY 
Sbjct: 198 FHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWD---EAIAAYRQAIKLEANSPVIY- 253

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDY 276
                      H F  G     +Q  E A++         P     Y++L  +   + ++
Sbjct: 254 -----------HQF--GYVLTQKQQWEEAISAYRQAIKIKPNSPDVYHHLGDALTQQQNW 300

Query: 277 EKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
           E+A G Y   +  + N P  + +  Y L Q+Q     +  A+  + K  E+ P++ +   
Sbjct: 301 EEAVGAYRKVTELQPNSPEVYHYFGYALSQLQ----QWEEAIVAYRKASELQPNSPDVHH 356

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            LGH  ++L Q + A   LR+A +++P  A+A+ DLG  L
Sbjct: 357 QLGHALIELKQNDWAVVELRQAVELNPNLAEAYRDLGRAL 396



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 183/397 (46%), Gaps = 31/397 (7%)

Query: 40  ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 99
           I N+  VY+ Y G+   K R  +E    A   Y +A +++ + P  +   G +L  K + 
Sbjct: 212 IPNSATVYHHY-GETLAKLRRWDE----AIAAYRQAIKLEANSPVIYHQFGYVLTQKQQW 266

Query: 100 EQASSAFK--IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
           E+A SA++  I ++ +  +V   LG A  +  +  + +++  Y++  ++ P+ P      
Sbjct: 267 EEAISAYRQAIKIKPNSPDVYHHLGDALTQ--QQNWEEAVGAYRKVTELQPNSPEVYHY- 323

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
            G    +L Q  +A  A+++A +L P   +V   +  A+++L+ N+ A +     ++++A
Sbjct: 324 FGYALSQLQQWEEAIVAYRKASELQPNSPDVHHQLGHALIELKQNDWAVV-----ELRQA 378

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
            E+ P  A A   L        Q    ++   +        P  +  Y  L ++Y S+  
Sbjct: 379 VELNPNLAEAYRDLGRALSNIKQW---DEAIASFQGAIELNPNLAEVYGYLGKAYASQKQ 435

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
           +++A + Y  ++K   K  E    ++ L    ++   F  A+ ++ + +E+  +  E   
Sbjct: 436 WDEAIVNYGHALKLNPKLPEV---HHNLALTLVQQQKFDDAIVSYGQAIELGINTAEIHH 492

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
            LGH   +L + ++A    R+AA+I+P  A  +  LGE L      A L+ +  A     
Sbjct: 493 QLGHTLSKLKRWDEAVISYRQAAEINPNSAAVYHVLGESL------AQLEKWDEAVAAYT 546

Query: 396 KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           KA +  P   +V  +IG +    G ++ A +++  A+
Sbjct: 547 KASQLHPKSADVRYHIGEVMSRLGRWDEAVEAYGKAV 583



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 142/334 (42%), Gaps = 35/334 (10%)

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
           ++ +  PT+   Y+   +   + G  EKA   Y  ++ E+N P+  ++    LG V  K+
Sbjct: 6   SLNSETPTQ---YFQQGQQAVAAGQLEKAVTLYKKTI-ELN-PNLALYQQ-NLGDVLAKI 59

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G +  A T ++K +E+ P +  +   LG++  + GQ+E+A     +A KI+P  ++ +I 
Sbjct: 60  GKWEEAATVYQKAIELKPTSALSHYNLGNVQEKQGQLEQAIASYSQAIKINPNFSELYIS 119

Query: 371 LGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           LG  L+       A+  F+ A +L  ++          N+GV   ++G+ E     ++ A
Sbjct: 120 LGSALVQKGLLYEAIANFQKAISLEPESS-----IAHQNLGVALEKQGQIEEGIICYRKA 174

Query: 430 --LGDGIW-----LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
             +  G W     L +  +K   +     A+ +  K  Q+            +P N  TV
Sbjct: 175 IEIDPGFWEGYQKLGIALTKQGEF---HQAAKIYLKACQI------------IP-NSATV 218

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
             +    L ++     A   YR  +    +    Y +   +   +   + +I    +A+K
Sbjct: 219 YHHYGETLAKLRRWDEAIAAYRQAIKLEANSPVIYHQFGYVLTQKQQWEEAISAYRQAIK 278

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASD 576
           +    P+    LGD   +  +W +A   +R  ++
Sbjct: 279 IKPNSPDVYHHLGDALTQQQNWEEAVGAYRKVTE 312



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 60/302 (19%), Positives = 129/302 (42%), Gaps = 23/302 (7%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G+   ++  YK+ ++++P+     +  +G    K+G+  +A   +Q+A++L P    AL 
Sbjct: 26  GQLEKAVTLYKKTIELNPNL-ALYQQNLGDVLAKIGKWEEAATVYQKAIELKP--TSALS 82

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
              + ++Q  +   + + +    +A +I P  +     L +     G   L E +     
Sbjct: 83  HYNLGNVQEKQGQ-LEQAIASYSQAIKINPNFSELYISLGSALVQKG--LLYEAIANFQK 139

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
           A++   P  S ++ NL  +   +G  E+  + Y  ++ EI+    F   Y  LG    K 
Sbjct: 140 AISLE-PESSIAHQNLGVALEKQGQIEEGIICYRKAI-EIDP--GFWEGYQKLGIALTKQ 195

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G+F  A   + K  +I P++       G    +L + ++A    R+A K++      +  
Sbjct: 196 GEFHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWDEAIAAYRQAIKLEANSPVIYHQ 255

Query: 371 LGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
            G +L        A+ A++ A            I++  N   ++   G+  +  Q++++A
Sbjct: 256 FGYVLTQKQQWEEAISAYRQA------------IKIKPNSPDVYHHLGDALTQQQNWEEA 303

Query: 430 LG 431
           +G
Sbjct: 304 VG 305


>gi|124026676|ref|YP_001015791.1| hypothetical protein NATL1_19711 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961744|gb|ABM76527.1| Hypothetical protein NATL1_19711 [Prochlorococcus marinus str.
           NATL1A]
          Length = 865

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 161/358 (44%), Gaps = 36/358 (10%)

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           G+    LG+L +A  ++++A+++ P+   A   L  +     +   +++    +++A EI
Sbjct: 85  GVILKDLGKLKEAELSYRKAIEIKPDYANAHYNLGNI---LRDLGQLKEAEISLRKAIEI 141

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAV---TNHGPTKSHSYYNLARSYHSKGD 275
            P  A+A + L N     G+        E  L++       P  + +Y NL        D
Sbjct: 142 KPDYAVAHSNLGNVLRDLGKS------KEAGLSLRKAIELNPDLAEAYSNLGNVLR---D 192

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
            EK     +++ K I    ++   +Y LG + + L   + A  +  K +E+ PD  E   
Sbjct: 193 LEKLKEAELSTRKAIEIKPDYAVAHYNLGTILIDLDKLKEAELSLRKAIELNPDLAEAYS 252

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
            LG++   LG++++A+   RKA +I P  A+A  +LG +L      + L   K A    +
Sbjct: 253 NLGNVLRDLGKLKEAELSTRKAIEIKPDYAEAHSNLGGIL------SNLGKLKEAEISSR 306

Query: 396 KAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
           KA E  P      +N+G I  + G+ + A  S+  AL        + +    ++ DA  S
Sbjct: 307 KAIEIKPDYGVAYSNLGTILKDIGKSQEAFDSYLKALDINPTDYDIYTSISIFLRDADIS 366

Query: 454 M---LQFKDMQLFHRFENDGNHVEL--PWNKV---TVLFNLARLLEQIHDTVAASVLY 503
               L+ K++       ND +H EL  P+N +    +  NLA+L     D+ +AS L+
Sbjct: 367 QLDKLKIKEILNIMLERNDVSHQELFKPFNFLYSNEITINLAKL-----DSDSASDLF 419



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 29/362 (8%)

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
           FT    L E     +++  N          N A  +  KG+  +A  YY   + +  K H
Sbjct: 19  FTVPFALGETKENISISSNNRSKPSKEQIINQAIKFQLKGNISEAAKYYQYFINKGFKDH 78

Query: 295 EFIFPYYGLGQVQLK-LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
             +F  YG   V LK LG  + A  ++ K +EI PD       LG+I   LGQ+++A+  
Sbjct: 79  R-VFSNYG---VILKDLGKLKEAELSYRKAIEIKPDYANAHYNLGNILRDLGQLKEAEIS 134

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGV 411
           LRKA +I P  A A  +LG +L   D G +    K A   L+KA E  P   E  +N+G 
Sbjct: 135 LRKAIEIKPDYAVAHSNLGNVL--RDLGKS----KEAGLSLRKAIELNPDLAEAYSNLGN 188

Query: 412 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
           +  +  + + A  S + A+       +      T +ID      + K+ +L  R      
Sbjct: 189 VLRDLEKLKEAELSTRKAIEIKPDYAVAHYNLGTILIDLD----KLKEAELSLR-----K 239

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
            +EL  +      NL  +L  +     A +  R  +    DY +A+  L  I      L+
Sbjct: 240 AIELNPDLAEAYSNLGNVLRDLGKLKEAELSTRKAIEIKPDYAEAHSNLGGILSNLGKLK 299

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK----DSYATL 587
            +     +A+++   Y  A S LG + LK  D  K++E F +   A D      D Y ++
Sbjct: 300 EAEISSRKAIEIKPDYGVAYSNLGTI-LK--DIGKSQEAFDSYLKALDINPTDYDIYTSI 356

Query: 588 SL 589
           S+
Sbjct: 357 SI 358


>gi|66793439|ref|NP_001019747.1| O-linked N-acetylglucosamine (GlcNAc) transferase [Xenopus
           (Silurana) tropicalis]
 gi|60618530|gb|AAH90599.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           [Xenopus (Silurana) tropicalis]
          Length = 1035

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 191/478 (39%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+ +DA +   T L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVVDAEECYNTAL 310

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 311 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 362

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 363 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 419

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 164/391 (41%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG    A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVVDAEECYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + E  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 427

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 18/295 (6%)

Query: 82  EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA---LLGQACVEFNRGRYSDSLE 138
           E +T+  +G +   + + + A  AF+  L+ D   +P    LLG A   F +G+ + + E
Sbjct: 50  EAATFFQQGVMRYNRSDFKAAELAFRKALQED-PFIPMARYLLGNAL--FQQGQIAAAAE 106

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 198
            Y+ A+ + P+   A    +GL  Y+ G + +A  A+Q+A+ +DP    A   L +    
Sbjct: 107 QYQMAIGLDPNMAEA-HYNLGLMLYQQGNIEEAISAYQQAIAIDPNLAAARYNLGL---- 161

Query: 199 ANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
           A EA G     + +  +A  + P  A+A   LA       Q+ +   +     A+ N   
Sbjct: 162 ALEAVGDTEAALSEYTQAVRLNPNSAVAKYNLA--LLLAKQNQVDSAIAALRQALRNDS- 218

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
               ++Y L      +    +A   ++ +  +IN    F   +Y LG + L+ GD   A+
Sbjct: 219 QFVQAHYQLGLLLAQQNQITEAKNSFLRAT-QINS--RFAPAHYRLGLIFLQQGDAEEAI 275

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             F  V +I PDN +  + LG   +Q G+ E+A   L +A  +DP D+ A  +L 
Sbjct: 276 RRFNWVTQIDPDNVDAYRQLGAALIQNGEYEQAIAALERAISLDPYDSLAHYNLA 330


>gi|422302483|ref|ZP_16389846.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
 gi|389788307|emb|CCI16150.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
          Length = 707

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 31/351 (8%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +GQ          A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P
Sbjct: 338 QGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALQRYSEALNTYEKAIQINP 397

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
               A  LG G    KLG+  +A  +F R L  +P   +A    A + L+  + +  +K 
Sbjct: 398 DSAWAAWLGRGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKA 457

Query: 209 MEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKS 260
           ++K+    Q   +I+     +L  L +   + G     EQ    ALA+          K 
Sbjct: 458 LDKLLTFQQNDAKIWYKKGWSLQNLED---YEGAVKAYEQ----ALAIEPDNALIWYQKG 510

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
           +S+Y L +   +   Y KAG +          P +F   +Y  G +  KLG    AL  F
Sbjct: 511 NSFYQLNKINDALESYSKAGQF---------NP-QFSQAHYSQGIILQKLGRKSEALQAF 560

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 379
            +  E   +  +     G +  Q+ + ++A     KA +I  + A+ FI +G       D
Sbjct: 561 TQATEANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGD 620

Query: 380 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              A++A++ A    K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 621 YPQAINAYQQAIQRQK----DNP-ETWKSLGNSCFKLGQYERAIQAYQESL 666


>gi|406980754|gb|EKE02316.1| hypothetical protein ACD_20C00399G0001 [uncultured bacterium]
          Length = 614

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 31/334 (9%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQAC 125
           A + +  +S +    P ++   G  L  K + E+A   F   ++ D +   A  L   A 
Sbjct: 52  AIEKFESSSHMGPKNPESFTNWGIALAKKNKYEEAIEKFIAAIKIDSEYARAYSLWAAAL 111

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
           VE   G   ++ + Y+ A++++P       +G G+   K  +   A + F+RAL ++P +
Sbjct: 112 VEL--GNMDEAEKRYEIAIKLNPKDIDT-YIGWGVALAKQNKKLLAEEKFKRALTINPRS 168

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP-------YCAMALNYLANHFFFTGQ 238
            +AL    V+    +E     + +E+ +    I P       Y ++AL+ L  H      
Sbjct: 169 TQALFFWGVI---LSELEKYNEAIERFETVNNIQPNNADVFHYWSIALSRLDRH------ 219

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFI 297
               E L +  +A+ N  P K   +  L  +  + G Y++A   Y  A     N P    
Sbjct: 220 ---DEALEKIKIAL-NINPVKVEPHIQLGETLTALGRYDEAIECYKTAETINSNLPD--- 272

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             Y   G    K G+   A++   K + +      TL  L     ++G+ ++A  LL + 
Sbjct: 273 -LYLAWGITLQKYGEHFEAVSKLSKAISLQEKKAATLYYLAISLAEIGEHQRAITLLEEV 331

Query: 358 AKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTA 390
             IDPR + AF+ LG +  I  D   A++ +K A
Sbjct: 332 LTIDPRYSDAFVKLGSIYNILKDHHKAIECYKNA 365



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 138/353 (39%), Gaps = 43/353 (12%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y  A +++  +  T++G G  L  + +   A   FK  L  +  +  AL     + 
Sbjct: 120 AEKRYEIAIKLNPKDIDTYIGWGVALAKQNKKLLAEEKFKRALTINPRSTQALFFWGVIL 179

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
               +Y++++E ++    + P+         I L R  L +  +A +  + AL ++P  V
Sbjct: 180 SELEKYNEAIERFETVNNIQPNNADVFHYWSIALSR--LDRHDEALEKIKIALNINPVKV 237

Query: 187 E-------ALVALAVMD-----------LQANE-----AAGIR--------KGMEKMQRA 215
           E        L AL   D           + +N      A GI         + + K+ +A
Sbjct: 238 EPHIQLGETLTALGRYDEAIECYKTAETINSNLPDLYLAWGITLQKYGEHFEAVSKLSKA 297

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
             +    A  L YLA      G+H     L E  L +    P  S ++  L   Y+   D
Sbjct: 298 ISLQEKKAATLYYLAISLAEIGEHQRAITLLEEVLTI---DPRYSDAFVKLGSIYNILKD 354

Query: 276 YEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           + KA   Y  +V   I   H      Y +      LGD+ +A+  + K +E  P+N +  
Sbjct: 355 HHKAIECYKNAVNTSIKNSH----ANYLIAVTYNSLGDYANAIKYYNKTIETNPENIDAY 410

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 387
             L  I  + G I++A   +R A + +P   +     G +++S D     DA 
Sbjct: 411 VNLAVILSETGDIKEAVRNMRIAFRKEPNSCKINTIYG-VILSKDESTYKDAL 462



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 14/110 (12%)

Query: 46  VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA 105
           +Y   L K E+  ++  E F       + A +ID    + +VGKG++L+      +A S 
Sbjct: 446 IYGVILSKDESTYKDALEKF-------DNAIKIDSDASTAYVGKGEILIRLMRFNEAIST 498

Query: 106 FKIVLEADRDNVPA--LLGQACVEF-----NRGRYSDSLEFYKRALQVHP 148
           +  +L  + +N+ A  +LG   +EF     N+  Y ++LE + + L+++P
Sbjct: 499 YNEILVKNPNNISAMFMLGVTYIEFADSSNNQAYYHNALECFNKTLKINP 548


>gi|118378373|ref|XP_001022362.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89304129|gb|EAS02117.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 390

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 131/278 (47%), Gaps = 14/278 (5%)

Query: 97  GEVEQASSAFKIV--LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
           G ++QA  ++K+   LEAD ++V   LG   V   +G+  +S+++YK+ L ++P+    +
Sbjct: 27  GMLDQAIESYKLYAQLEADDNDVYYNLGL--VYQQKGQLDESIKWYKKCLNLNPNDESCL 84

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
           +  IG   ++     +  +   R +Q++P+N+     L  + ++ N      + +   ++
Sbjct: 85  Q-KIGAVYFQKNMFDECIEKNLRCIQINPKNINYYNNLGFIFIEKNMN---DEALNYFKK 140

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           + EI P     +NY  N      +  L+E+  +      N  P  S  YYNL   + +K 
Sbjct: 141 SLEINPN-QDQINY--NIGVIYDRKGLLEEAIKHYQNCINLNPEYSKCYYNLGVCFRNKN 197

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
            +++A   Y   +  +N  HE    YY LG   L+      A++ F+K L I P      
Sbjct: 198 MFDEAIQNYQKCII-LNPQHESC--YYNLGNALLEKNMLDEAISAFQKCLNINPKKDSCY 254

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           + +G+ +++     +A +  +K+ +++P+    +  LG
Sbjct: 255 ENMGNAFLRKEMYNEAIKSYQKSIELNPQFDSCYRSLG 292



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/330 (20%), Positives = 137/330 (41%), Gaps = 23/330 (6%)

Query: 46  VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA 105
           VYY  LG +  ++ + +E    + ++Y K   ++ ++ S     G +   K   ++    
Sbjct: 49  VYYN-LGLVYQQKGQLDE----SIKWYKKCLNLNPNDESCLQKIGAVYFQKNMFDECIEK 103

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
               ++ +  N+        +   +    ++L ++K++L+++P+    I   IG+   + 
Sbjct: 104 NLRCIQINPKNINYYNNLGFIFIEKNMNDEALNYFKKSLEINPN-QDQINYNIGVIYDRK 162

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G L +A + +Q  + L+PE  +    L V     N              A + Y  C + 
Sbjct: 163 GLLEEAIKHYQNCINLNPEYSKCYYNLGVCFRNKN----------MFDEAIQNYQKCIIL 212

Query: 226 LNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
                + ++  G   L + + + A++      N  P K   Y N+  ++  K  Y +A  
Sbjct: 213 NPQHESCYYNLGNALLEKNMLDEAISAFQKCLNINPKKDSCYENMGNAFLRKEMYNEAIK 272

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
            Y  S+ E+N   +F   Y  LG     +  F   +  F+K LE+ P N      L   Y
Sbjct: 273 SYQKSI-ELNP--QFDSCYRSLGYAFCCIEKFDQGIEQFKKCLELNPKNEHCNHNLAKAY 329

Query: 342 VQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           +  G I++A    ++  +I+P+D +   +L
Sbjct: 330 LLNGMIDEAIISYQRQLEINPKDQECLQEL 359



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 18/247 (7%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
            G    ++E YK   Q+       +   +GL   + GQL ++ + +++ L L+P +   L
Sbjct: 26  NGMLDQAIESYKLYAQLEAD-DNDVYYNLGLVYQQKGQLDESIKWYKKCLNLNPNDESCL 84

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
             +  +  Q N      + +EK  R  +I P     +NY  N  F     F+ + + + A
Sbjct: 85  QKIGAVYFQKN---MFDECIEKNLRCIQINP---KNINYYNNLGFI----FIEKNMNDEA 134

Query: 250 LAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
           L          P +    YN+   Y  KG  E+A  +Y      IN   E+   YY LG 
Sbjct: 135 LNYFKKSLEINPNQDQINYNIGVIYDRKGLLEEAIKHYQNC---INLNPEYSKCYYNLGV 191

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
                  F  A+ N++K + + P +      LG+  ++   +++A    +K   I+P+  
Sbjct: 192 CFRNKNMFDEAIQNYQKCIILNPQHESCYYNLGNALLEKNMLDEAISAFQKCLNINPKKD 251

Query: 366 QAFIDLG 372
             + ++G
Sbjct: 252 SCYENMG 258



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 68/133 (51%), Gaps = 6/133 (4%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           YY LG V  + G    ++  ++K L + P++   L+ +G +Y Q    ++  E   +  +
Sbjct: 50  YYNLGLVYQQKGQLDESIKWYKKCLNLNPNDESCLQKIGAVYFQKNMFDECIEKNLRCIQ 109

Query: 360 IDPRDAQAFIDLGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
           I+P++   + +LG + I  +    AL+ FK  ++L     ++   ++  NIGVI+  KG 
Sbjct: 110 INPKNINYYNNLGFIFIEKNMNDEALNYFK--KSLEINPNQD---QINYNIGVIYDRKGL 164

Query: 419 FESAHQSFKDALG 431
            E A + +++ + 
Sbjct: 165 LEEAIKHYQNCIN 177


>gi|430744814|ref|YP_007203943.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
 gi|430016534|gb|AGA28248.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
          Length = 1199

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 168/395 (42%), Gaps = 60/395 (15%)

Query: 33   VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 92
            +R +  A  N LG+     GK           F  A   Y +A  +D          G  
Sbjct: 690  LRPQSAAAHNVLGIALKVQGK-----------FGEAVASYERALTLDPKHVPAHCNLGGA 738

Query: 93   LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
            L+A+ ++E+A++ F+  +  D ++ PA  G      ++G+  +++E  +RA+ +      
Sbjct: 739  LMAQQKLEEANARFRAAIALDPNSAPAHTGLGWALCDQGKLDEAVESGRRAIALDSKSAS 798

Query: 153  A-IRLGIGLCRYK-----------------------------LGQLGKARQA---FQRAL 179
            A   LG  L   K                             LG  GK  +A   ++ A 
Sbjct: 799  AHYNLGRALALQKKLDEAISCYRQAIALDPTFAKAHMNLGNELGNQGKWAEAVACYETAT 858

Query: 180  QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
            QL+P++    ++L V   + ++   + + +  ++RA  + P      NY   H+      
Sbjct: 859  QLNPKDAVPHISLGVALSKQDK---LEEAVASLKRAISLDP------NYATAHYNLGVAL 909

Query: 240  FLVEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
               ++L E   ++       P  + ++YNL  +Y  +   ++A   Y  ++ E+N+   +
Sbjct: 910  SKQDKLDEAVASLKRTIALDPNYATAHYNLGNAYSEQRKLDEAVTSYRRAI-ELNR--NY 966

Query: 297  IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
               +  LG   ++ G    A+T+F++V+E+  ++      LG    +L + ++A    R 
Sbjct: 967  TSAHLNLGNELIRQGKLVDAVTSFKRVIELDSNHARAHNQLGIALRRLKRWDEAVTAHRT 1026

Query: 357  AAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTA 390
            A K+DP+ A+A+ +LG  L    + G A+ ++K A
Sbjct: 1027 AIKLDPKYARAYHELGVTLQAQGELGEAITSYKRA 1061



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 103/203 (50%), Gaps = 18/203 (8%)

Query: 25   EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 84
            ++DE  A ++   IA+       +  LG   ++QR+ +E    A   Y +A  ++ +  S
Sbjct: 914  KLDEAVASLK-RTIALDPNYATAHYNLGNAYSEQRKLDE----AVTSYRRAIELNRNYTS 968

Query: 85   TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQACVEFNRGRYSDSLEFYKR 142
              +  G  L+ +G++  A ++FK V+E D ++  A   LG A     R  + +++  ++ 
Sbjct: 969  AHLNLGNELIRQGKLVDAVTSFKRVIELDSNHARAHNQLGIALRRLKR--WDEAVTAHRT 1026

Query: 143  ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM-----DL 197
            A+++ P    A    +G+     G+LG+A  +++RA++L+P N E L  LA +     ++
Sbjct: 1027 AIKLDPKYARAYH-ELGVTLQAQGELGEAITSYKRAIELEPNNTERLADLAWLLATCGEV 1085

Query: 198  QANEAAGIRKGMEKMQRAFEIYP 220
            +  + AG    +E  QRA ++ P
Sbjct: 1086 KHRDPAG---AVELAQRAVDLSP 1105



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 72/337 (21%), Positives = 139/337 (41%), Gaps = 51/337 (15%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
            A +   +A  +D    S     G+ L  + ++++A S ++  +  D     A +      
Sbjct: 782  AVESGRRAIALDSKSASAHYNLGRALALQKKLDEAISCYRQAIALDPTFAKAHMNLGNEL 841

Query: 128  FNRGRYSDSLEFYKRALQVHP--SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
             N+G++++++  Y+ A Q++P  + P  I LG+ L   K  +L +A  + +RA+ LDP  
Sbjct: 842  GNQGKWAEAVACYETATQLNPKDAVP-HISLGVALS--KQDKLEEAVASLKRAISLDPNY 898

Query: 186  VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
              A   L V   + ++   + + +  ++R   + P  A A   L N +  + Q  L E +
Sbjct: 899  ATAHYNLGVALSKQDK---LDEAVASLKRTIALDPNYATAHYNLGNAY--SEQRKLDEAV 953

Query: 246  TETALAV-TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH---------- 294
            T    A+  N   T +H   NL      +G    A +     V E++  H          
Sbjct: 954  TSYRRAIELNRNYTSAH--LNLGNELIRQGKLVDA-VTSFKRVIELDSNHARAHNQLGIA 1010

Query: 295  ----------------------EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
                                  ++   Y+ LG      G+   A+T++++ +E+ P+N E
Sbjct: 1011 LRRLKRWDEAVTAHRTAIKLDPKYARAYHELGVTLQAQGELGEAITSYKRAIELEPNNTE 1070

Query: 333  TLKALGHIYVQLGQIE-----KAQELLRKAAKIDPRD 364
             L  L  +    G+++      A EL ++A  + P D
Sbjct: 1071 RLADLAWLLATCGEVKHRDPAGAVELAQRAVDLSPDD 1107


>gi|449016020|dbj|BAM79422.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
           10D]
          Length = 975

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 161/684 (23%), Positives = 281/684 (41%), Gaps = 114/684 (16%)

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           Y L R    +GD+ +A  +Y  S++      E       L    L+      A+   E+V
Sbjct: 313 YLLGRWRERRGDWIEAETHYGTSIQHWT---EMAVARLALAYSLLRRNALDQAMDQIERV 369

Query: 324 LE----IYPDNCET-LKALGHIYVQ---------LGQIEKAQ----ELLRKAAKIDPRDA 365
            +      P   +  L+AL  + +Q            +E+AQ    ELL +   ++   A
Sbjct: 370 RQQGSRALPARLDAYLRALSAVILQEKAADEQASRKALEQAQQHALELL-QGTDLEQLPA 428

Query: 366 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 425
           +A     EL+   D   AL  +      L K  ++ PI V NNI  +    G++  A+ +
Sbjct: 429 EALAVYAELMDRLDPAFALQLYSR----LGKHWDD-PI-VWNNIAALRVRLGQYNEAYIA 482

Query: 426 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 485
            + AL             +    D   S+  +     F R        + PW+ +T+ +N
Sbjct: 483 LERAL-------------QLVTGDQGLSLRTWLPEVAFIR--------KRPWH-LTLSYN 520

Query: 486 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK-ARNNLQLSIELVNEALKVN 544
           L RLLE + D   +  +YR I  ++ +Y DA LRL  +A+    NL  + +L  + L  N
Sbjct: 521 LGRLLESLGDLTRSESIYRTIHEQFPEYEDATLRLGVLAEHLHRNLNTAEDLYRQVLP-N 579

Query: 545 GKYPNALSMLGDLELKNDD---WV----------KAKETFRAASDATDGKDS--YATLSL 589
            +   AL+ L     + D+   W           K  ET   A +  D   +  Y TL+ 
Sbjct: 580 PRAVTALAFLAQSRGRVDEAQAWFEYFIRRKKLRKDLETRYQARNYCDLVTAAYYVTLAR 639

Query: 590 GNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 649
               +  + R++          L  A  L   V+ +   N+ A    GV   E      +
Sbjct: 640 ATARHHQSRRHK---------FLVAAGNLLLGVLERAHDNVAAMQLLGVYFREMNLLSEA 690

Query: 650 KDLFTQVQEAASGSVFVQMPDVW----INLAHVYFAQGNFALA-----MKMYQNCLRKFY 700
           ++    V  A  G+V    P +      NL  V+ ++G+  +A     +++  + L+   
Sbjct: 691 EEALCAV--AQLGAVASAEPKIMECARANLIAVHLSRGSAVVASLRNAIRLLDDRLQSAP 748

Query: 701 YNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKT 760
           Y  DA  L+ LA  HY   Q+  C ++L RA+HL PS  ++ FD  + + + S+  L + 
Sbjct: 749 Y--DAGALMALAAAHYGLGQYAACMETLQRALHLQPSALSVWFDLSLTLAQESSIRLSRP 806

Query: 761 RRTADEVRSTVAELENAVRVFSHL---------SAASNL------HLHGFDEKKINTHV- 804
               D   +TV  LE A   F  +         S ++++       L G   K +     
Sbjct: 807 DHGTDPEVATVL-LECAGGCFRAMEMSLRQMQRSVSTDVVRQWQPSLAGPTNKVVTAEAA 865

Query: 805 ----EYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEE--QKKYLLEK 858
                +C H L  A+  R  AE +E+  R+ +E  ++    E A  +  +  +++  +E+
Sbjct: 866 HANSSWCLHRLAYAR--RLLAEAQERTRRRHEELQQRQQQREAAAARQADAVRQRREVEQ 923

Query: 859 RKLEDEQKRLRQQEEHFQRVKEQW 882
           R++E+ +K  R+Q+  F R +E+W
Sbjct: 924 REIEELEKLAREQQLEFCRRQEEW 947


>gi|167619111|ref|ZP_02387742.1| TPR domain protein [Burkholderia thailandensis Bt4]
 gi|257138346|ref|ZP_05586608.1| TPR domain-containing protein [Burkholderia thailandensis E264]
          Length = 614

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G ++ A   ++  L  +  N  AL     +   +GR+ ++ +   RA+++ P+   A++L
Sbjct: 15  GRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAVELRPND-AALQL 73

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK--GMEKMQR 214
            +G     LG+L  A + F+ AL L PE       LA  +L    AA  R    ++  QR
Sbjct: 74  NLGNAFKALGRLDDAIERFRNALTLAPE-----FPLAHYNLGNAYAAQERHDDAVDAFQR 128

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           A  + P  A   N L N     G+H         AL +    P  + ++ NL  +  + G
Sbjct: 129 ALALAPGDASIHNNLGNALNALGRHGDALAAFRRALELR---PGHAGAHNNLGMALAALG 185

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           D E+A  ++ A++    +   F+  ++ LG     +G    AL+ FE  L + P     L
Sbjct: 186 DTEEAIAHFRAALAAEPR---FVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLAL 242

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             L +    LG+   A     +A  +DP    A+++LG
Sbjct: 243 FGLANALAALGRHRDALPHYERAVGLDPSFVLAWLNLG 280



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 18/236 (7%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIY 219
           ++ G+L  A   ++ AL  +P N +AL    V+  Q     EAA +      + RA E+ 
Sbjct: 12  HRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADL------VGRAVELR 65

Query: 220 PY-CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
           P   A+ LN L N F   G+   ++   E         P    ++YNL  +Y ++  ++ 
Sbjct: 66  PNDAALQLN-LGNAFKALGR---LDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDD 121

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A   +  ++            +  LG     LG    AL  F + LE+ P +      LG
Sbjct: 122 AVDAFQRALALAPGDASI---HNNLGNALNALGRHGDALAAFRRALELRPGHAGAHNNLG 178

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
                LG  E+A    R A   +PR   A  +LG  L +    A AL AF++A  L
Sbjct: 179 MALAALGDTEEAIAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALAL 234



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 122/303 (40%), Gaps = 20/303 (6%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           GR  D+   Y+ AL  +P+   A+ L  G+ R++ G+  +A     RA++L P +     
Sbjct: 15  GRLDDAEHGYRAALATNPANADALHL-FGVLRHQQGRHEEAADLVGRAVELRPNDA---- 69

Query: 191 ALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
           AL +    A +A G +   +E+ + A  + P   +A   L N +    +H       + A
Sbjct: 70  ALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRA 129

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
           LA+    P  +  + NL  + ++ G +  A L       E+   H     +  LG     
Sbjct: 130 LALA---PGDASIHNNLGNALNALGRHGDA-LAAFRRALELRPGHAGA--HNNLGMALAA 183

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           LGD   A+ +F   L   P        LG+    +G+  +A      A  + PR   A  
Sbjct: 184 LGDTEEAIAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLALF 243

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFK 427
            L   L      AAL   + A    ++A    P  VL   N+G  H   G  E A ++F 
Sbjct: 244 GLANAL------AALGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFD 297

Query: 428 DAL 430
            AL
Sbjct: 298 QAL 300



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 42  NALGVYYTYLGKIETKQREKEEHF--ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 99
           N LG+    LG  E    E   HF   LA +    A+  ++         G  L A G  
Sbjct: 175 NNLGMALAALGDTE----EAIAHFRAALAAEPRFVAAHFNL---------GNALDAVGRH 221

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            QA SAF+  L        AL G A      GR+ D+L  Y+RA+ + PS   A  L +G
Sbjct: 222 AQALSAFESALALQPRFPLALFGLANALAALGRHRDALPHYERAVGLDPSFVLAW-LNLG 280

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEA 188
              + LG    A +AF +AL+LDP +  A
Sbjct: 281 TAHHALGAHEMALRAFDQALRLDPSHALA 309


>gi|187918068|ref|YP_001883631.1| tetratricopeptide repeat family protein [Borrelia hermsii DAH]
 gi|119860916|gb|AAX16711.1| tetratricopeptide repeat family protein [Borrelia hermsii DAH]
          Length = 380

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 14/318 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A   F  +L+ D DN  AL+G   +E  +  +  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAEELFDDILQKDDDNNYALVGLGDIERKKRNFDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y+R L  H +   A+  G+G C   LG   KA   ++  L+ D EN+  L  +A    
Sbjct: 79  IYYQRCLAKHSNNNYAL-FGLGDCYRSLGDYKKATDVWEEYLKYDSENITVLTRVAS--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   R  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSRQSYLRVLELVPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYEINQVK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ K G+Y+     EI+ P+ F +  +GL        ++  AL
Sbjct: 194 IDVRVLTSIGNCYRKLKEFSK-GIYFFKRALEIS-PNNF-YAIFGLADCYRGNKEYHEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  ++E    N   L  +G  Y  L + + AQ   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLTIIERDSKNNLVLTRVGDTYRYLKEYDNAQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 378 SDTGAALDAFKTARTLLK 395
            + G   +A    + L+K
Sbjct: 308 KEQGQYEEALSAIKNLIK 325



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           K +++KA +YY   + + +  +   +  +GLG     LGD++ A   +E+ L+   +N  
Sbjct: 71  KRNFDKAIIYYQRCLAKHSNNN---YALFGLGDCYRSLGDYKKATDVWEEYLKYDSENIT 127

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 392
            L  +   Y +L   +K+++   +  ++ P +  A + +G L    D     +A K    
Sbjct: 128 VLTRVASSYRKLKNFQKSRQSYLRVLELVPDNDYALVGIGHLY--YDFKEYKEALKYWLK 185

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           + +    ++ + VL +IG  + +  EF      FK AL
Sbjct: 186 MYEINQVKIDVRVLTSIGNCYRKLKEFSKGIYFFKRAL 223


>gi|148230096|ref|NP_001087833.1| O-linked N-acetylglucosamine (GlcNAc) transferase [Xenopus laevis]
 gi|51949982|gb|AAH82353.1| Ogt-prov protein [Xenopus laevis]
          Length = 1063

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/478 (21%), Positives = 195/478 (40%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+ +DA +   T L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVVDAEECYNTAL 320

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL   ++     + +        AS+
Sbjct: 321 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKALE--VFPEFAAAHSNL------ASV 370

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
           LQ +  +L     +    + +         N+   L+++ D   A   Y   +     + 
Sbjct: 371 LQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 429

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 430 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 164/391 (41%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG    A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVVDAEECYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + E  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|386813992|ref|ZP_10101216.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403489|dbj|GAB64097.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 332

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 56/262 (21%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           KG  + A  AF+ V+E   DNV A        F+ GR+  ++E +K+ +Q+ P    A  
Sbjct: 102 KGMFDNAIEAFQKVIEQKPDNVDAYYNLGSAYFDTGRFDKAIESFKKTVQIKPDHRSAYS 161

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDP------ENVEALVALAVMDLQANEAAGIRKGM 209
           L +G+   K+G+   A Q  ++ ++LDP       N+  + ++  MD +A         M
Sbjct: 162 L-LGIAYSKIGKYDDAIQILKKRIELDPNLAIAHSNLGIVYSMKGMDKEA---------M 211

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           E+  +A EI P           H              E+AL             YN A  
Sbjct: 212 EEYTKALEIDP----------GH--------------ESAL-------------YNTALL 234

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
           Y   GD ++A  YY+ +  E N  +      Y LG+  +K   +  A+  F+  +   PD
Sbjct: 235 YDKTGDTDRAIQYYIKAT-EANVSNA--DAQYRLGKNYIKKKQYDDAINAFQIAVMTNPD 291

Query: 330 NCETLKALGHIYVQLGQIEKAQ 351
           N E  + +G+ Y   G  ++A+
Sbjct: 292 NAEIYQDIGNAYKAKGMKKEAE 313



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)

Query: 238 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
           Q+ L ++  E         P  + +Y N+  +Y  KG ++ A     A  K I +  + +
Sbjct: 67  QYGLFDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDNA---IEAFQKVIEQKPDNV 123

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             YY LG      G F  A+ +F+K ++I PD+      LG  Y ++G+ + A ++L+K 
Sbjct: 124 DAYYNLGSAYFDTGRFDKAIESFKKTVQIKPDHRSAYSLLGIAYSKIGKYDDAIQILKKR 183

Query: 358 AKIDPRDAQAFIDLG 372
            ++DP  A A  +LG
Sbjct: 184 IELDPNLAIAHSNLG 198



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 10/242 (4%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G + +++E +K++L  +P+   A    IGL   + G    A +AFQ+ ++  P+NV+A  
Sbjct: 69  GLFDEAIEMFKKSLAKNPNNTDAYN-NIGLAYAQKGMFDNAIEAFQKVIEQKPDNVDAYY 127

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
            L        +     K +E  ++  +I P    A + L   +   G++    Q+ +  +
Sbjct: 128 NLGSAYF---DTGRFDKAIESFKKTVQIKPDHRSAYSLLGIAYSKIGKYDDAIQILKKRI 184

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
            +    P  + ++ NL   Y  KG  ++A   Y  ++ EI+  HE     Y    +  K 
Sbjct: 185 ELD---PNLAIAHSNLGIVYSMKGMDKEAMEEYTKAL-EIDPGHESAL--YNTALLYDKT 238

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           GD   A+  + K  E    N +    LG  Y++  Q + A    + A   +P +A+ + D
Sbjct: 239 GDTDRAIQYYIKATEANVSNADAQYRLGKNYIKKKQYDDAINAFQIAVMTNPDNAEIYQD 298

Query: 371 LG 372
           +G
Sbjct: 299 IG 300



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
           I+ PHE     Y  G    + G F  A+  F+K L   P+N +    +G  Y Q G  + 
Sbjct: 52  IDMPHE----QYKQGLHYAQYGLFDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDN 107

Query: 350 AQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVL 406
           A E  +K  +  P +  A+ +LG      DTG    A+++FK  +T+  K        +L
Sbjct: 108 AIEAFQKVIEQKPDNVDAYYNLGSAYF--DTGRFDKAIESFK--KTVQIKPDHRSAYSLL 163

Query: 407 NNIGVIHFEKGEFESAHQSFK 427
              G+ + + G+++ A Q  K
Sbjct: 164 ---GIAYSKIGKYDDAIQILK 181



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 7/126 (5%)

Query: 612 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 671
            ++A E++ + + ++ +N  A N  G+  A+KG FD + + F +V E    +V     D 
Sbjct: 71  FDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIEQKPDNV-----DA 125

Query: 672 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 731
           + NL   YF  G F  A++ ++  ++    +  A  LL +A +  +  ++ D  + L + 
Sbjct: 126 YYNLGSAYFDTGRFDKAIESFKKTVQIKPDHRSAYSLLGIAYS--KIGKYDDAIQILKKR 183

Query: 732 IHLAPS 737
           I L P+
Sbjct: 184 IELDPN 189


>gi|334118716|ref|ZP_08492804.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333458946|gb|EGK87561.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1483

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 14/285 (4%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
            L +G+++ A +A +  ++   D + A +         G+   ++  Y +AL++ P+   
Sbjct: 682 FLVQGKIKDAIAACQQAIKIRPDFIHAYVTLGNALQAEGKNEAAIRSYSQALELRPNF-A 740

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
            +R  IG   +K+G+L +A   +Q+A+ L+P+   A   L  +     +   I+  +   
Sbjct: 741 EVRANIGSMYFKMGRLEEAIAHYQQAIALNPDLAGAHWNLGKV---YQKHGNIQAAIACF 797

Query: 213 QRAFEIYPYCAMA---LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           +R  E+ P    A    N L N  F  G+     +  E A+A+    P  + +Y N+   
Sbjct: 798 KRTSELNPQLVGADFHFN-LGNRLFSQGKRDEAIECYEKAIAIK---PDWAEAYGNIGSV 853

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
              +G+ + A  YY  +V    KP   +  ++ +    L+   +  A+TN+   L+I PD
Sbjct: 854 RSQQGNLDAAIAYYQKAVAL--KPQLEVL-HFNIANSFLQQNKYDEAITNYRNTLKIKPD 910

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             E    LG  +  LG++E+A    ++A  + P  A+ +  +G +
Sbjct: 911 WPEVHANLGSCFSMLGRLEEALASYQQALALKPDWAEVYCRMGHI 955



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  +  +  LA  Y  +G++EKA      ++K   KP +F   Y  +G  Q   G    A
Sbjct: 441 PGDAEVHKKLAEVYVLQGEFEKAIASCNLAIK--FKP-DFAAAYLTMGNAQHAQGQLEMA 497

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           +  + + LEI P   E    LG +Y +LGQ+E+A    +KA  I+P+ +   + LG +L
Sbjct: 498 IQAYLQALEIQPKFAEASANLGSMYYKLGQLEQAANYYQKALAINPQLSSVNLMLGSVL 556



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 110/519 (21%), Positives = 201/519 (38%), Gaps = 76/519 (14%)

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
           A+G++E A  A+   LE       A      + +  G+   +  +Y++AL ++P    ++
Sbjct: 490 AQGQLEMAIQAYLQALEIQPKFAEASANLGSMYYKLGQLEQAANYYQKALAINPQL-SSV 548

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDP------ENVEALVA----------LAVMDLQ 198
            L +G    +  +L  A   +Q+ LQ  P      E + +L+A             ++ +
Sbjct: 549 NLMLGSVLQQQEKLDAAIACYQKVLQQQPGDASAAEKLSSLLAQKQRETTDSNFIELETE 608

Query: 199 ANEAAGIR----KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
           + EA  +     +G      +  + P  A     L   F  T    L EQ+T  +L V +
Sbjct: 609 SGEAQPVSVNKDEGYGLQPSSINLPP--APTTETLNTPF--TNPAELSEQVT--SLNVPD 662

Query: 255 HGPTKS----HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
            G   +      Y  LA ++  +G  + A     A  + I    +FI  Y  LG      
Sbjct: 663 SGQVANFKEVEPYKKLAENFLVQGKIKDA---IAACQQAIKIRPDFIHAYVTLGNALQAE 719

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G   +A+ ++ + LE+ P+  E    +G +Y ++G++E+A    ++A  ++P  A A  +
Sbjct: 720 GKNEAAIRSYSQALELRPNFAEVRANIGSMYFKMGRLEEAIAHYQQAIALNPDLAGAHWN 779

Query: 371 LGELLIS-SDTGAALDAFKTARTL-----------------------------LKKAGEE 400
           LG++     +  AA+  FK    L                              +KA   
Sbjct: 780 LGKVYQKHGNIQAAIACFKRTSELNPQLVGADFHFNLGNRLFSQGKRDEAIECYEKAIAI 839

Query: 401 VP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
            P   E   NIG +  ++G  ++A   ++ A+        L  + +    + + S LQ  
Sbjct: 840 KPDWAEAYGNIGSVRSQQGNLDAAIAYYQKAVA-------LKPQLEVLHFNIANSFLQQN 892

Query: 459 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
                    N  N +++  +   V  NL      +     A   Y+  L    D+ + Y 
Sbjct: 893 KYD--EAITNYRNTLKIKPDWPEVHANLGSCFSMLGRLEEALASYQQALALKPDWAEVYC 950

Query: 519 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
           R+  I K    L+ +I    +A++ N KY  A   L DL
Sbjct: 951 RMGHIQKQDKPLE-AIANFEKAIQCNPKYSEAYQQLCDL 988



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 6/122 (4%)

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           GD   A+ N++K LE+ P + E  K L  +YV  G+ EKA      A K  P  A A++ 
Sbjct: 424 GDLGGAIENYQKALELNPGDAEVHKKLAEVYVLQGEFEKAIASCNLAIKFKPDFAAAYLT 483

Query: 371 LGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           +G           A+ A+  A  +  K  E        N+G ++++ G+ E A   ++ A
Sbjct: 484 MGNAQHAQGQLEMAIQAYLQALEIQPKFAEASA-----NLGSMYYKLGQLEQAANYYQKA 538

Query: 430 LG 431
           L 
Sbjct: 539 LA 540



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 1/117 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + Y KA  ++  +        ++ + +GE E+A ++  + ++   D   A L     +
Sbjct: 429 AIENYQKALELNPGDAEVHKKLAEVYVLQGEFEKAIASCNLAIKFKPDFAAAYLTMGNAQ 488

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
             +G+   +++ Y +AL++ P    A    +G   YKLGQL +A   +Q+AL ++P+
Sbjct: 489 HAQGQLEMAIQAYLQALEIQPKFAEA-SANLGSMYYKLGQLEQAANYYQKALAINPQ 544


>gi|328950837|ref|YP_004368172.1| hypothetical protein Marky_1325 [Marinithermus hydrothermalis DSM
           14884]
 gi|328451161|gb|AEB12062.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 362

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 27/298 (9%)

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           +  PS    + LG     Y  GQ   A  AF+RA++LD +NVEAL  LA   L+      
Sbjct: 29  RTQPSVQNYVLLGNQY--YDAGQYDAALIAFKRAVELDEKNVEALYGLARAQLRLRL--- 83

Query: 205 IRKGMEKMQRAFEI-----YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
               +E ++ A  +       Y A+A  Y  + +           L + AL V N     
Sbjct: 84  FSSAVENLKAAISLDASYTPAYVALAQAY-TDQYINARDREAARALLDQALLVLNDAERI 142

Query: 260 SHSYYNLARS----YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
           +  YY +       Y  KGD EKA   +  ++  IN     +   Y L    L LG    
Sbjct: 143 NPEYYAIYNQRGLIYQYKGDPEKAAEAFEKALS-INNEDPIVL--YNLALTNLSLGRLDE 199

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           AL+  ++ + + P +       G +    G+++ A   L +A ++DP +A A+  LG++ 
Sbjct: 200 ALSLLKRAVAVAPQDSYVRARYGALLAVKGRLDDALFELEQAVRLDPTNALAWSYLGQVR 259

Query: 376 ISSDTGAALDAFKTARTLLKKAGEEVP---IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                      ++ A   L +A E  P    E    +G ++ E+GE+E A  +   A+
Sbjct: 260 FQRKE------YEEALAALSRAVERDPSRYPEAYFYLGRVYMERGEYEEARYNLSKAV 311



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 107/268 (39%), Gaps = 43/268 (16%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           N A RI+    + +  +G +   KG+ E+A+ AF+  L  + ++   L   A    + GR
Sbjct: 137 NDAERINPEYYAIYNQRGLIYQYKGDPEKAAEAFEKALSINNEDPIVLYNLALTNLSLGR 196

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
             ++L   KRA+ V P     +R   G      G+L  A    ++A++LDP N       
Sbjct: 197 LDEALSLLKRAVAVAPQD-SYVRARYGALLAVKGRLDDALFELEQAVRLDPTN------- 248

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
                                         A+A +YL    F   ++   E L   + AV
Sbjct: 249 ------------------------------ALAWSYLGQVRFQRKEY--EEALAALSRAV 276

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
                    +Y+ L R Y  +G+YE+A   Y  S   +  P    + Y+ LG    KLGD
Sbjct: 277 ERDPSRYPEAYFYLGRVYMERGEYEEAR--YNLSKAVVLDPANAEYRYW-LGHANEKLGD 333

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHI 340
              A   ++K +E+ PD  E  + L  +
Sbjct: 334 MEGAAAQYKKAIELRPDYPEAREGLARV 361



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 140/369 (37%), Gaps = 76/369 (20%)

Query: 38  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
           +A+L AL V  T     E  Q   + + +L  QYY+                       G
Sbjct: 13  LAVLPALAVAQT--DSEERTQPSVQNYVLLGNQYYDA----------------------G 48

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRL 156
           + + A  AFK  +E D  NV AL G A  +     +S ++E  K A+ +  S  P  + L
Sbjct: 49  QYDAALIAFKRAVELDEKNVEALYGLARAQLRLRLFSSAVENLKAAISLDASYTPAYVAL 108

Query: 157 GI-------------------------------------------GLCRYKLGQLGKARQ 173
                                                        GL     G   KA +
Sbjct: 109 AQAYTDQYINARDREAARALLDQALLVLNDAERINPEYYAIYNQRGLIYQYKGDPEKAAE 168

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
           AF++AL ++ E+   L  LA+ +L       + + +  ++RA  + P  +          
Sbjct: 169 AFEKALSINNEDPIVLYNLALTNLSLGR---LDEALSLLKRAVAVAPQDSYVRARYGALL 225

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
              G+  L + L E   AV    PT + ++  L +    + +YE+A      +V+    P
Sbjct: 226 AVKGR--LDDALFELEQAV-RLDPTNALAWSYLGQVRFQRKEYEEALAALSRAVE--RDP 280

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
             +   Y+ LG+V ++ G++  A  N  K + + P N E    LGH   +LG +E A   
Sbjct: 281 SRYPEAYFYLGRVYMERGEYEEARYNLSKAVVLDPANAEYRYWLGHANEKLGDMEGAAAQ 340

Query: 354 LRKAAKIDP 362
            +KA ++ P
Sbjct: 341 YKKAIELRP 349


>gi|156341942|ref|XP_001620825.1| hypothetical protein NEMVEDRAFT_v1g222670 [Nematostella vectensis]
 gi|156206191|gb|EDO28725.1| predicted protein [Nematostella vectensis]
          Length = 1459

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 176/417 (42%), Gaps = 86/417 (20%)

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHP-----SCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
             V+ + G Y +++++Y++ALQV+      S    +RL IG  + +LG   +A + FQ+A
Sbjct: 515 GVVQQSLGNYEEAMKYYQQALQVYERTGNESKQANVRLNIGGVQQRLGNYEEAMKYFQQA 574

Query: 179 LQLDPENVEALVALAVMDLQANEA--AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 236
           LQ             V +   NE+  AG R  +  +Q+    Y     A+ Y        
Sbjct: 575 LQ-------------VFERTGNESDQAGARMNIGGVQQRLGNYE---EAMKYY------- 611

Query: 237 GQHFLVEQLTETALAV---TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV------ 287
                     + AL V   T +   ++    N+     S G+YE+A  YY  ++      
Sbjct: 612 ----------QQALQVFERTGNESDQAGVRLNIGGVQQSLGNYEEAMKYYQQALQVYERT 661

Query: 288 ----KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY------PDNCETLKAL 337
               K+ N  H        +G VQ  LG++  A+  +++VL+++       D  +    +
Sbjct: 662 GNESKQANVRHN-------IGVVQQSLGNYEEAMKYYQQVLQVFERTGNESDQADVRHNI 714

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDA----QAFIDLGELLISSDTG---AALDAFKTA 390
           G +   LG  E+A +  ++A ++  R      QA +     ++    G    A+  ++ A
Sbjct: 715 GVVQQSLGNYEEAMKYYQQALQVFERTGNESKQANVRHNIGVVQQSLGNYEEAMKYYQQA 774

Query: 391 RTLLKKAGEEV-PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 449
             + ++ G E    +V NNIGV+    G +E A + ++ AL   ++    +   K  V +
Sbjct: 775 LQVFERTGNESDQADVRNNIGVVQQSLGNYEEAMKYYQQAL--QVFERTGNESAKAGVYN 832

Query: 450 ASASMLQFKDMQL---------FHRFENDGNHVE-LPWNKVTVLFNLARLLEQIHDT 496
           +  SM + K   L         F  FE+    ++ LP +K+T +     + +Q+ D 
Sbjct: 833 SIGSMYRKKQNYLDAESHFTKSFELFESCFTKIQSLPDSKITFVDTFIHVCQQLVDV 889



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 150/342 (43%), Gaps = 36/342 (10%)

Query: 124 ACVEFNRGRYSDSLEFYKRALQV-----HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
             V+ + G Y +++++Y++ALQV     + S    +RL IG  + +LG   +A + FQ+A
Sbjct: 355 GVVQQSLGNYEEAMKYYQQALQVFERTGNESDQADVRLNIGGVQQRLGNYEEAMKYFQQA 414

Query: 179 LQL----DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           LQ+      E+ +A V + +  +Q        + M+  Q+A +++       +       
Sbjct: 415 LQVFERTGNESDQAGVRMNIGGVQ-QRLGNYEEAMKYYQQALQVFERTGNESDQAGVRLN 473

Query: 235 FTGQHFLVEQLTET------ALAV---TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
             G    ++   E       AL V   T +   ++   +N+     S G+YE+A  YY  
Sbjct: 474 IGGVQRRLDNYEEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYEEAMKYYQQ 533

Query: 286 SVK---EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY------PDNCETLKA 336
           +++         +       +G VQ +LG++  A+  F++ L+++       D       
Sbjct: 534 ALQVYERTGNESKQANVRLNIGGVQQRLGNYEEAMKYFQQALQVFERTGNESDQAGARMN 593

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDA----QAFIDLGELLISSDTG---AALDAFKT 389
           +G +  +LG  E+A +  ++A ++  R      QA + L    +    G    A+  ++ 
Sbjct: 594 IGGVQQRLGNYEEAMKYYQQALQVFERTGNESDQAGVRLNIGGVQQSLGNYEEAMKYYQQ 653

Query: 390 ARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A  + ++ G E     V +NIGV+    G +E A + ++  L
Sbjct: 654 ALQVYERTGNESKQANVRHNIGVVQQSLGNYEEAMKYYQQVL 695



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 90/410 (21%), Positives = 173/410 (42%), Gaps = 57/410 (13%)

Query: 57  KQREKEEHFILATQYY----NKASRIDMHEPSTWVGKGQLLLAKGEVEQA----SSAFKI 108
           K RE  E +  A Q Y    N++ + D+      +  G +  +KG  E+A      A ++
Sbjct: 27  KHREALEQYQQALQVYISTGNESDQADVR-----LNIGAVYQSKGNYEEAMKYCQQALQV 81

Query: 109 VLEADRDNVPALLGQAC--VEFNRGRYSDSLEFYKRALQVHPSC-----PGAIRLGIGLC 161
            +    ++  A + Q+   V+ + G Y +++++Y++ALQV+ S         +RL IG  
Sbjct: 82  YISTGNESKQADVRQSIGLVQQSLGNYEEAIKYYQQALQVYISTGNESKQAGVRLNIGAV 141

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA--AGIRKGMEKMQRAFEIY 219
              LG   +A +  Q+ALQ             V     NE+  A +R+ +  +Q++   Y
Sbjct: 142 YQSLGNYEEAMKYCQQALQ-------------VYISTGNESKQADVRQSIGLVQQSLGNY 188

Query: 220 PYCAMALNYL--ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
                A+ Y   A   F   +     Q        T +   ++    N+     S G+YE
Sbjct: 189 E---EAIKYYQQALQVFIALEAMKYYQQALQVFESTGNESKQADVRQNIGLVQDSLGNYE 245

Query: 278 KAGLYYMASVKEINKP---HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY------P 328
           +A  YY  +++   +     E       +G VQ +LG++  A+  +++ L+++       
Sbjct: 246 EAMKYYQQALQVFERTGNESEQAGVRLNIGGVQQRLGNYEEAMKYYQQALQVFERTGNES 305

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA----QAFIDLGELLISSDTG--- 381
           +       +G +   LG  E+A +  ++A ++  R      QA +     ++    G   
Sbjct: 306 EQAGVRHNIGVVQQSLGNYEEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYE 365

Query: 382 AALDAFKTARTLLKKAGEEV-PIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            A+  ++ A  + ++ G E    +V  NIG +    G +E A + F+ AL
Sbjct: 366 EAMKYYQQALQVFERTGNESDQADVRLNIGGVQQRLGNYEEAMKYFQQAL 415



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 131/621 (21%), Positives = 257/621 (41%), Gaps = 80/621 (12%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGA-----IRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
           G Y +++++ ++ALQV+ S         +R  IGL +  LG   +A + +Q+ALQ+    
Sbjct: 146 GNYEEAMKYCQQALQVYISTGNESKQADVRQSIGLVQQSLGNYEEAIKYYQQALQVFIA- 204

Query: 186 VEAL----VALAVMDLQANEA--AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           +EA+     AL V +   NE+  A +R+ +  +Q +   Y             F  TG  
Sbjct: 205 LEAMKYYQQALQVFESTGNESKQADVRQNIGLVQDSLGNYEEAMKYYQQALQVFERTGNE 264

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP---HEF 296
                 +E A    N G  +              G+YE+A  YY  +++   +     E 
Sbjct: 265 ------SEQAGVRLNIGGVQ-----------QRLGNYEEAMKYYQQALQVFERTGNESEQ 307

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA------LGHIYVQLGQIEKA 350
               + +G VQ  LG++  A+  +++ L+++       K       +G +   LG  E+A
Sbjct: 308 AGVRHNIGVVQQSLGNYEEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYEEA 367

Query: 351 QELLRKAAKIDPRDA----QAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEV-P 402
            +  ++A ++  R      QA + L    +    G    A+  F+ A  + ++ G E   
Sbjct: 368 MKYYQQALQVFERTGNESDQADVRLNIGGVQQRLGNYEEAMKYFQQALQVFERTGNESDQ 427

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDAL------GD-----GIWLTLLDSKTKTYVIDAS 451
             V  NIG +    G +E A + ++ AL      G+     G+ L +   + +   +D  
Sbjct: 428 AGVRMNIGGVQQRLGNYEEAMKYYQQALQVFERTGNESDQAGVRLNIGGVQRR---LDNY 484

Query: 452 ASMLQF--KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 509
              +++  + +Q+F R  N+    ++  N   V  +L    E +     A  +Y     +
Sbjct: 485 EEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYEEAMKYYQQALQVYERTGNE 544

Query: 510 YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN------ALSMLGDLELKNDD 563
            +   +  L +  + +   N + +++   +AL+V  +  N      A   +G ++ +  +
Sbjct: 545 SKQ-ANVRLNIGGVQQRLGNYEEAMKYFQQALQVFERTGNESDQAGARMNIGGVQQRLGN 603

Query: 564 WVKAKETFRAASDA---TDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYT 620
           + +A + ++ A      T  +   A + L       +L N + A K    + ++A ++Y 
Sbjct: 604 YEEAMKYYQQALQVFERTGNESDQAGVRLNIGGVQQSLGNYEEAMK----YYQQALQVYE 659

Query: 621 RVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA--ASGSVFVQMPDVWINLAHV 678
           R     +      +  GVV    G ++ +   + QV +    +G+   Q  DV  N+  V
Sbjct: 660 RT-GNESKQANVRHNIGVVQQSLGNYEEAMKYYQQVLQVFERTGNESDQ-ADVRHNIGVV 717

Query: 679 YFAQGNFALAMKMYQNCLRKF 699
             + GN+  AMK YQ  L+ F
Sbjct: 718 QQSLGNYEEAMKYYQQALQVF 738


>gi|333994602|ref|YP_004527215.1| hypothetical protein TREAZ_0636 [Treponema azotonutricium ZAS-9]
 gi|333737419|gb|AEF83368.1| tetratricopeptide repeat protein [Treponema azotonutricium ZAS-9]
          Length = 384

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 58/284 (20%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           KG   L +  +E+A   F  +L+ D +N  AL+G       RG + D++ +Y+  L  HP
Sbjct: 38  KGYKYLRENRIEEAVDCFSQILKVDENNNYALVGMGDATRKRGSFKDAVIYYQHCLSYHP 97

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-----VMDLQANEAA 203
               A+  G+  C   + Q  KA + +++ L  D +++  L  +A     V D + ++A 
Sbjct: 98  GNNYAL-FGLADCFKAINQFHKAIEIWEQYLLHDDKSITVLTRVADAYRKVRDFKHSKAV 156

Query: 204 GIRKGMEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
            +        R  EI    PY  + L YL  H+ F                         
Sbjct: 157 YL--------RVLEIEADNPYAIIGLGYL--HYDFK------------------------ 182

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
                         +Y  A L+Y   + E+NK +  I     +G    KL  F S +  F
Sbjct: 183 --------------EYLDA-LFYWEKMIEVNKDNVDIRVLTSIGNCHRKLKTFESGIAYF 227

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
           EK L+  P N   L  L   Y  L Q +++     +  + DPR+
Sbjct: 228 EKALQRDPGNFYALFGLADCYRGLNQQDRSLGYWNRILEQDPRN 271


>gi|406982243|gb|EKE03586.1| hypothetical protein ACD_20C00180G0001, partial [uncultured
           bacterium]
          Length = 521

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 4/167 (2%)

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
           V    P  +  YYNL  S   KG++EKA L +  SV+      +F   Y  LG +  K  
Sbjct: 66  VIQLNPDYAEGYYNLGNSLQEKGEFEKAQLCFQKSVE---LKSDFTEAYNNLGLILSKQL 122

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
            F  A+  ++K +++ PD C++   LG    + GQ E+A++   KA +I P  A+A+I+L
Sbjct: 123 QFDKAMEYYKKAIDLDPDYCDSYINLGSALNEKGQSEEARKYFHKALEIKPDFAEAYINL 182

Query: 372 GE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
           G+   +S+D   + + ++ A  +  +  +      L N+   +F+KG
Sbjct: 183 GKSFYLSTDLEESEECYQKALLIKPEYADAYFGLALINLLKGNFDKG 229



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 17/246 (6%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVL---EADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
           +G   L LA   + Q  +A    L   E + D   A L    +   + R  DS+  +++ 
Sbjct: 7   LGYFNLALAYNSINQKDNAINCYLKTIEVNPDYFQAYLNLGILLAEKERLDDSIACFEKV 66

Query: 144 LQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 202
           +Q++P    G   LG  L   + G+  KA+  FQ++++L  +  EA   L ++    ++ 
Sbjct: 67  IQLNPDYAEGYYNLGNSLQ--EKGEFEKAQLCFQKSVELKSDFTEAYNNLGLI---LSKQ 121

Query: 203 AGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
               K ME  ++A ++ P YC   +N L +     GQ     +    AL +    P  + 
Sbjct: 122 LQFDKAMEYYKKAIDLDPDYCDSYIN-LGSALNEKGQSEEARKYFHKALEIK---PDFAE 177

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           +Y NL +S++   D E++   Y  ++  + KP E+   Y+GL  + L  G+F      +E
Sbjct: 178 AYINLGKSFYLSTDLEESEECYQKAL--LIKP-EYADAYFGLALINLLKGNFDKGWEYYE 234

Query: 322 KVLEIY 327
               +Y
Sbjct: 235 YRFSLY 240



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 11/170 (6%)

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           Y+NLA +Y+S    + A   Y+ ++ E+N   ++   Y  LG +  +      ++  FEK
Sbjct: 9   YFNLALAYNSINQKDNAINCYLKTI-EVNP--DYFQAYLNLGILLAEKERLDDSIACFEK 65

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 382
           V+++ PD  E    LG+   + G+ EKAQ   +K+ ++     +A+ +LG L++S     
Sbjct: 66  VIQLNPDYAEGYYNLGNSLQEKGEFEKAQLCFQKSVELKSDFTEAYNNLG-LILSKQL-- 122

Query: 383 ALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               F  A    KKA +  P   +   N+G    EKG+ E A + F  AL
Sbjct: 123 ---QFDKAMEYYKKAIDLDPDYCDSYINLGSALNEKGQSEEARKYFHKAL 169


>gi|367471923|ref|ZP_09471520.1| putative TPR repeat protein [Bradyrhizobium sp. ORS 285]
 gi|365275762|emb|CCD83988.1| putative TPR repeat protein [Bradyrhizobium sp. ORS 285]
          Length = 1410

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 10/282 (3%)

Query: 93   LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
            L ++GE+  A   FK++L     N  AL+G   +     R  ++ +++ RA+ V+ +   
Sbjct: 792  LQSRGEISDAEQIFKLILAGQPTNFEALVGLGMISTTYSRLEEAKDYFVRAVAVNANSAE 851

Query: 153  AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
            A    IG      G+  +A + ++ AL L P +   L   A++  + N+   I + M  +
Sbjct: 852  A-HGSIGAVEGSAGRYDEAVRHYETALTLSPSHPGILYGFAMV--RQNQGL-IDEAMALL 907

Query: 213  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
            +RA +  P    A   L N  + +G+     +     L V +  P  + ++ N+A     
Sbjct: 908  RRAIDNKPQHLDAHFALGNLLYTSGKDI---EAARHYLKVLDFSPEHAETHNNIANVLLR 964

Query: 273  KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
            +G  E+A  +Y  ++   ++P ++   Y  LG   L+L     ++      ++I P+   
Sbjct: 965  QGHRERAIEHYQRAIA--SRP-DYADAYGNLGNAFLELNRLEESIEQNLLAIKIKPERFG 1021

Query: 333  TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            +   LG  Y  LG+ ++A    +KA ++ P DA   ++L  +
Sbjct: 1022 SYNNLGVAYQALGRFDEATAAFQKALELAPDDAPIHLNLANM 1063



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 17/263 (6%)

Query: 87   VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
            VG G +      +E+A   F   +  + ++  A      VE + GRY +++  Y+ AL +
Sbjct: 820  VGLGMISTTYSRLEEAKDYFVRAVAVNANSAEAHGSIGAVEGSAGRYDEAVRHYETALTL 879

Query: 147  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 206
             PS PG I  G  + R   G + +A    +RA+   P++++A  AL   +L       I 
Sbjct: 880  SPSHPG-ILYGFAMVRQNQGLIDEAMALLRRAIDNKPQHLDAHFALG--NLLYTSGKDIE 936

Query: 207  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
                 + +  +  P  A   N +AN     G      +  + A+A     P  + +Y NL
Sbjct: 937  AARHYL-KVLDFSPEHAETHNNIANVLLRQGHRERAIEHYQRAIASR---PDYADAYGNL 992

Query: 267  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
              ++      E++    + ++K   KP  F   Y  LG     LG F  A   F+K LE+
Sbjct: 993  GNAFLELNRLEESIEQNLLAIK--IKPERF-GSYNNLGVAYQALGRFDEATAAFQKALEL 1049

Query: 327  YPDNCETLKALGHIYVQLGQIEK 349
             PD+         I++ L  + K
Sbjct: 1050 APDDAP-------IHLNLANMSK 1065



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 6/119 (5%)

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG  C +   GR+S+++  Y RAL + P+ P  + L +G C   +G+L  A +  Q+AL 
Sbjct: 192 LGDVCRQL--GRHSEAIAHYTRALAIEPNMP-MVLLNLGGCHQAIGELDAAIRNLQKALA 248

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           L P+  EA   L  + L      G    +   +RA  + P    A N  AN    +G+H
Sbjct: 249 LSPQLAEAHYNLGNIHLDMKSWPG---ALFHYERAVALRPDFPEAHNNFANALESSGRH 304



 Score = 47.0 bits (110), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 17/267 (6%)

Query: 166  GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
            G++  A Q F+  L   P N EALV L ++    +    + +  +   RA  +    A A
Sbjct: 796  GEISDAEQIFKLILAGQPTNFEALVGLGMISTTYSR---LEEAKDYFVRAVAVNANSAEA 852

Query: 226  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
               +       G++    +  ETAL ++   P+     Y  A    ++G  ++A    MA
Sbjct: 853  HGSIGAVEGSAGRYDEAVRHYETALTLS---PSHPGILYGFAMVRQNQGLIDEA----MA 905

Query: 286  SVKEI--NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             ++    NKP + +  ++ LG +    G    A  ++ KVL+  P++ ET   + ++ ++
Sbjct: 906  LLRRAIDNKP-QHLDAHFALGNLLYTSGKDIEAARHYLKVLDFSPEHAETHNNIANVLLR 964

Query: 344  LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI 403
             G  E+A E  ++A    P  A A+ +LG   +  +    L+       L  K   E   
Sbjct: 965  QGHRERAIEHYQRAIASRPDYADAYGNLGNAFLELNR---LEESIEQNLLAIKIKPER-F 1020

Query: 404  EVLNNIGVIHFEKGEFESAHQSFKDAL 430
               NN+GV +   G F+ A  +F+ AL
Sbjct: 1021 GSYNNLGVAYQALGRFDEATAAFQKAL 1047



 Score = 43.1 bits (100), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 11/229 (4%)

Query: 51   LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
            LG I T     EE    A  Y+ +A  ++ +        G +  + G  ++A   ++  L
Sbjct: 822  LGMISTTYSRLEE----AKDYFVRAVAVNANSAEAHGSIGAVEGSAGRYDEAVRHYETAL 877

Query: 111  EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
                 +   L G A V  N+G   +++   +RA+   P    A    +G   Y  G+  +
Sbjct: 878  TLSPSHPGILYGFAMVRQNQGLIDEAMALLRRAIDNKPQHLDA-HFALGNLLYTSGKDIE 936

Query: 171  ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
            A + + + L   PE+ E    +A + L+        + +E  QRA    P  A A   L 
Sbjct: 937  AARHYLKVLDFSPEHAETHNNIANVLLRQGHR---ERAIEHYQRAIASRPDYADAYGNLG 993

Query: 231  NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
            N F    +   +E+  E  L      P +  SY NL  +Y + G +++A
Sbjct: 994  NAFLELNR---LEESIEQNLLAIKIKPERFGSYNNLGVAYQALGRFDEA 1039


>gi|332711804|ref|ZP_08431735.1| glycosyltransferase involved in cell wall biogenesis [Moorea
            producens 3L]
 gi|332349782|gb|EGJ29391.1| glycosyltransferase involved in cell wall biogenesis [Moorea
            producens 3L]
          Length = 1427

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 118/300 (39%), Gaps = 60/300 (20%)

Query: 68   ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 125
            A Q Y K      + P    G G L    G+ + A   F+  +EA+ ++V A   LG  C
Sbjct: 793  AVQLYYKILEQQPNHPEALYGLGVLAQQTGQYDTAEKLFRATVEAEPNSVKAWFSLGNLC 852

Query: 126  VEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
                +G+ SDS+E Y+R L + P+  P    LG  L   + G    A  ++Q+AL+++P 
Sbjct: 853  Q--GQGQLSDSVECYQRVLTIQPNLVPVYNNLGYAL--QQQGNWDDAIASYQQALEIEPT 908

Query: 185  NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
              EA V L    L A E   + K                                     
Sbjct: 909  CTEADVNLG-NALHAQEKLALEK------------------------------------- 930

Query: 245  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
              +   A  NH          L  +    GD   A  YY  +V       + +  +Y LG
Sbjct: 931  --QAHYAQLNH---------ELGVTRQKAGDLTNAVAYYRQAVA---MQSDLVSAHYNLG 976

Query: 305  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK-IDPR 363
             V    G+F +A+ +++KVLE+ P   E    LG IY    Q+E+A    R+    ++PR
Sbjct: 977  VVLQDQGEFENAIASYQKVLELNPSYGEVYFNLGRIYQTQKQLEEAASAYRQGLMLVNPR 1036



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 23/262 (8%)

Query: 180 QLDPENVEALVALAVMDLQA---NEAAGIRKGMEKMQRAFE------IYPYCAMALNYLA 230
           QL   N+E+L+  A  + Q    +EA  I + + ++Q  ++      + PY  +A+   A
Sbjct: 5   QLLESNLESLINTAAQNHQLGKLDEAESIYRQVIQIQGDYQGEEKSLLKPYNVIAIANFA 64

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
           + F    +      L + AL +    P  +  + NL   + +KG+ +KA  YY  ++K  
Sbjct: 65  SIFEEKNKLEEAVALYQQALTLK---PDFAEVHNNLGNIFWAKGELDKAVQYYQEAIKV- 120

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
            KP ++   +  LG +    G    A+  +++ + + PD  +    LG++    G+++ A
Sbjct: 121 -KP-DYAVAHNNLGNLLHNQGKLGEAVHCYQEAIRVKPDYAQAYCNLGNVLQVQGKLDAA 178

Query: 351 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNN 408
           +E  ++A K+     QA  +LG L     T   LDA   AR   ++A    P   +  NN
Sbjct: 179 RESYQEAIKLKADCFQAHNNLGTLF---QTQGKLDA---ARESYQEAIRLKPDYADAHNN 232

Query: 409 IGVIHFEKGEFESAHQSFKDAL 430
           +G I  ++G+ E A QS+++A+
Sbjct: 233 LGTILQKQGKLEEAVQSYQEAI 254



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 131/280 (46%), Gaps = 25/280 (8%)

Query: 163 YKLGQLGKARQAFQRALQ------------LDPENVEALVALAVMDLQANEAAGIRKGME 210
           ++LG+L +A   +++ +Q            L P NV A+   A +  + N+   + + + 
Sbjct: 22  HQLGKLDEAESIYRQVIQIQGDYQGEEKSLLKPYNVIAIANFASIFEEKNK---LEEAVA 78

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
             Q+A  + P  A   N L N F+  G+     Q  + A+ V    P  + ++ NL    
Sbjct: 79  LYQQALTLKPDFAEVHNNLGNIFWAKGELDKAVQYYQEAIKVK---PDYAVAHNNLGNLL 135

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
           H++G   +A   Y  +++   KP ++   Y  LG V    G   +A  ++++ +++  D 
Sbjct: 136 HNQGKLGEAVHCYQEAIRV--KP-DYAQAYCNLGNVLQVQGKLDAARESYQEAIKLKADC 192

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
            +    LG ++   G+++ A+E  ++A ++ P  A A  +LG +L     G   +A ++ 
Sbjct: 193 FQAHNNLGTLFQTQGKLDAARESYQEAIRLKPDYADAHNNLGTIL--QKQGKLEEAVQSY 250

Query: 391 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           +  ++   +    EV NN+G    E+ + E A QS++ AL
Sbjct: 251 QEAIRLKPDFA--EVYNNLGNTLHEQCKLEEALQSYQQAL 288



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 26/196 (13%)

Query: 608 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 667
           +A  L +A +LY +++ Q  ++  A  G GV+  + GQ+D ++ LF    EA   SV   
Sbjct: 786 QANRLNQAVQLYYKILEQQPNHPEALYGLGVLAQQTGQYDTAEKLFRATVEAEPNSV--- 842

Query: 668 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ---WQDC 724
               W +L ++   QG  + +++ YQ  L          ++       Y  +Q   W D 
Sbjct: 843 --KAWFSLGNLCQGQGQLSDSVECYQRVL-----TIQPNLVPVYNNLGYALQQQGNWDDA 895

Query: 725 KKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK-------------TRRTADEVRSTV 771
             S  +A+ + P+      + G A+       L+K             TR+ A ++ + V
Sbjct: 896 IASYQQALEIEPTCTEADVNLGNALHAQEKLALEKQAHYAQLNHELGVTRQKAGDLTNAV 955

Query: 772 AELENAVRVFSHLSAA 787
           A    AV + S L +A
Sbjct: 956 AYYRQAVAMQSDLVSA 971



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 129/283 (45%), Gaps = 22/283 (7%)

Query: 97  GEVEQASSAFKIVLEADRD------------NVPALLGQACVEFNRGRYSDSLEFYKRAL 144
           G++++A S ++ V++   D            NV A+   A +   + +  +++  Y++AL
Sbjct: 25  GKLDEAESIYRQVIQIQGDYQGEEKSLLKPYNVIAIANFASIFEEKNKLEEAVALYQQAL 84

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
            + P     +   +G   +  G+L KA Q +Q A+++ P+   A   L   +L  N+   
Sbjct: 85  TLKPDF-AEVHNNLGNIFWAKGELDKAVQYYQEAIKVKPDYAVAHNNLG--NLLHNQGK- 140

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           + + +   Q A  + P  A A   L N     G+     +  + A+ +      ++H+  
Sbjct: 141 LGEAVHCYQEAIRVKPDYAQAYCNLGNVLQVQGKLDAARESYQEAIKLKADC-FQAHN-- 197

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           NL   + ++G  + A   Y  +++   KP ++   +  LG +  K G    A+ ++++ +
Sbjct: 198 NLGTLFQTQGKLDAARESYQEAIRL--KP-DYADAHNNLGTILQKQGKLEEAVQSYQEAI 254

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
            + PD  E    LG+   +  ++E+A +  ++A  I+P  A+A
Sbjct: 255 RLKPDFAEVYNNLGNTLHEQCKLEEALQSYQQALSINPNLAEA 297



 Score = 43.1 bits (100), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 28/305 (9%)

Query: 476 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 535
           P+N V  + N A + E+ +    A  LY+  L    D+ + +  L  I  A+  L  +++
Sbjct: 54  PYN-VIAIANFASIFEEKNKLEEAVALYQQALTLKPDFAEVHNNLGNIFWAKGELDKAVQ 112

Query: 536 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYAT--LSLGNWN 593
              EA+KV   Y  A + LG+L L N    K  E      +A   K  YA    +LGN  
Sbjct: 113 YYQEAIKVKPDYAVAHNNLGNL-LHNQG--KLGEAVHCYQEAIRVKPDYAQAYCNLGN-- 167

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
               L+ + +        L+ A+E Y   I        A N  G +   +G+ D +++ +
Sbjct: 168 ---VLQVQGK--------LDAARESYQEAIKLKADCFQAHNNLGTLFQTQGKLDAARESY 216

Query: 654 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD-AQILLYLA 712
              QEA    +     D   NL  +   QG    A++ YQ  +R      D A++   L 
Sbjct: 217 ---QEAI--RLKPDYADAHNNLGTILQKQGKLEEAVQSYQEAIR---LKPDFAEVYNNLG 268

Query: 713 RTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVA 772
            T +E  + ++  +S  +A+ + P+    +    V       S++ + + T +  + ++ 
Sbjct: 269 NTLHEQCKLEEALQSYQQALSINPNLAEAKLAMCVCQIPIIYSSVDEIKVTRNNYQGSLK 328

Query: 773 ELENA 777
           +L ++
Sbjct: 329 KLADS 333



 Score = 40.4 bits (93), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 24/249 (9%)

Query: 460  MQLFHR-FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
            +QL+++  E   NH E        L+ L  L +Q      A  L+R  +    + V A+ 
Sbjct: 794  VQLYYKILEQQPNHPE-------ALYGLGVLAQQTGQYDTAEKLFRATVEAEPNSVKAWF 846

Query: 519  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA---- 574
             L  + + +  L  S+E     L +        + LG    +  +W  A  +++ A    
Sbjct: 847  SLGNLCQGQGQLSDSVECYQRVLTIQPNLVPVYNNLGYALQQQGNWDDAIASYQQALEIE 906

Query: 575  -----SDATDGKDSYA--TLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHT 627
                 +D   G   +A   L+L    ++A L +E    + +A  L  A   Y + +   +
Sbjct: 907  PTCTEADVNLGNALHAQEKLALEKQAHYAQLNHELGVTRQKAGDLTNAVAYYRQAVAMQS 966

Query: 628  SNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 687
              + A    GVVL ++G+F+ +   + +V E           +V+ NL  +Y  Q     
Sbjct: 967  DLVSAHYNLGVVLQDQGEFENAIASYQKVLELNPS-----YGEVYFNLGRIYQTQKQLEE 1021

Query: 688  AMKMYQNCL 696
            A   Y+  L
Sbjct: 1022 AASAYRQGL 1030


>gi|386393454|ref|ZP_10078235.1| tetratricopeptide repeat protein [Desulfovibrio sp. U5L]
 gi|385734332|gb|EIG54530.1| tetratricopeptide repeat protein [Desulfovibrio sp. U5L]
          Length = 209

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 13/173 (7%)

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
           H P    ++YNL  +Y +KG   +A   ++ +V+      E    Y  LG + +  G+  
Sbjct: 21  HNPGCGVTHYNLGTAYVAKGRLVEAEAEFLQAVECSPSLAEG---YVQLGGLAMNKGNLD 77

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE- 373
           + L   EK     P        +G +++Q G+++KA++ LR+A KIDP+  QA   LG  
Sbjct: 78  ACLEWNEKACRARPLFAVPYGNIGFVHLQRGEVDKAEKALRRAVKIDPKYVQALATLGSA 137

Query: 374 LLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 424
           L +  D  AA   F++A+ L     E  P     +NN+ ++  E+G+F+ A +
Sbjct: 138 LFMKGDIDAA--EFQSAKAL-----EIEPNFGPAINNLALVAMERGDFQKAKE 183



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 9/154 (5%)

Query: 81  HEPSTWVGK---GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           H P   V     G   +AKG + +A + F   +E         +    +  N+G     L
Sbjct: 21  HNPGCGVTHYNLGTAYVAKGRLVEAEAEFLQAVECSPSLAEGYVQLGGLAMNKGNLDACL 80

Query: 138 EFYKRALQVHPSCPGAIRLG-IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
           E+ ++A +  P    A+  G IG    + G++ KA +A +RA+++DP+ V+AL  L    
Sbjct: 81  EWNEKACRARPLF--AVPYGNIGFVHLQRGEVDKAEKALRRAVKIDPKYVQALATLGSAL 138

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 230
               +   I     +  +A EI P    A+N LA
Sbjct: 139 FMKGD---IDAAEFQSAKALEIEPNFGPAINNLA 169


>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 406

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 140/307 (45%), Gaps = 20/307 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL     E+A   ++ +L+ +     A   +  V    GRY ++LE Y++AL+++P   G
Sbjct: 60  LLKLKRPEKALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAG 119

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A      L   +LG+  +A + +++ALQ++P+  +A      + +   +     K  EK 
Sbjct: 120 AWN-NKALVLKELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEK- 177

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLAR 268
             A E+ P      NY A        H L  ++ E AL     V    P    ++ N   
Sbjct: 178 --AIELNPK-----NYRAWGTKGITLHNL--KIYEEALKCYDKVLQLNPQDDKAWNNKGL 228

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            ++  G Y+++   Y  ++ +IN   +    +   G V  +LG +  AL  +EK LEI P
Sbjct: 229 VFNELGRYDESLECYEKAL-QIN--PKLAEAWNNKGVVLSELGRYEEALECYEKALEIDP 285

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           ++ +T    G +  +LG+ E A E  +KA +I+P  A A+   G  +I  D     ++ K
Sbjct: 286 EDDKTWNNKGLVLEELGKYEDALECFQKALEINPEFADAWKWKG--IILEDLKEPEESLK 343

Query: 389 TARTLLK 395
             +  LK
Sbjct: 344 CYKKALK 350



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 44/380 (11%)

Query: 3   REYFKQGK----VEQFRQILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK 57
           R   KQGK    +++FR+ L+   ++PEI                   ++Y  +  ++ K
Sbjct: 24  RSSLKQGKYKEALKEFRKALKARPNNPEI-------------------LHYNAITLLKLK 64

Query: 58  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 117
           + EK      A + Y K  + +      W  KG +L   G  ++A   ++  L+ +    
Sbjct: 65  RPEK------ALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYA 118

Query: 118 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 177
            A   +A V    GRY ++LE Y++ALQ++P    A     G     L +  KA + F++
Sbjct: 119 GAWNNKALVLKELGRYDEALECYEKALQINPKLADAW-YNKGSVLIYLKKYKKALKCFEK 177

Query: 178 ALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
           A++L+P+N  A     + + +L+  E A     ++   +  ++ P    A N     F  
Sbjct: 178 AIELNPKNYRAWGTKGITLHNLKIYEEA-----LKCYDKVLQLNPQDDKAWNNKGLVFNE 232

Query: 236 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
            G++    +  E AL +    P  + ++ N        G YE+A   Y  ++ EI+   +
Sbjct: 233 LGRYDESLECYEKALQIN---PKLAEAWNNKGVVLSELGRYEEALECYEKAL-EIDPEDD 288

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
             +   GL  V  +LG +  AL  F+K LEI P+  +  K  G I   L + E++ +  +
Sbjct: 289 KTWNNKGL--VLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCYK 346

Query: 356 KAAKIDPRDAQAFIDLGELL 375
           KA K++P++   +   G+ L
Sbjct: 347 KALKLNPQNKTLWYMQGKTL 366



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 15/304 (4%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G+  L +G+ ++A   F+  L+A  +N   L   A       R   +LE Y++ L+ +P 
Sbjct: 23  GRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKILKNNPK 82

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
              A     GL   +LG+  +A + +++AL+++P+   A    A++     E     + +
Sbjct: 83  LAEAWN-NKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALV---LKELGRYDEAL 138

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           E  ++A +I P  A A     +   +  ++    +  E A+ +    P    ++     +
Sbjct: 139 ECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELN---PKNYRAWGTKGIT 195

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
            H+   YE+A L     V ++N   +  +   GL  V  +LG +  +L  +EK L+I P 
Sbjct: 196 LHNLKIYEEA-LKCYDKVLQLNPQDDKAWNNKGL--VFNELGRYDESLECYEKALQINPK 252

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA---ALDA 386
             E     G +  +LG+ E+A E   KA +IDP D + + + G  L+  + G    AL+ 
Sbjct: 253 LAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKG--LVLEELGKYEDALEC 310

Query: 387 FKTA 390
           F+ A
Sbjct: 311 FQKA 314



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 12/160 (7%)

Query: 42  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 101
           N  GV  + LG+ E            A + Y KA  ID  +  TW  KG +L   G+ E 
Sbjct: 258 NNKGVVLSELGRYEE-----------ALECYEKALEIDPEDDKTWNNKGLVLEELGKYED 306

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A   F+  LE + +   A   +  +  +     +SL+ YK+AL+++P     +    G  
Sbjct: 307 ALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNPQ-NKTLWYMQGKT 365

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 201
             KLG+  +A + ++++L++DPE  +A  AL  + +Q N+
Sbjct: 366 LQKLGKHKEALKCYEKSLKIDPEYKKAKKALKELTIQKNQ 405


>gi|27499606|gb|AAO17363.1| O-linked GlcNAc transferase [Mus musculus]
          Length = 1046

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 105/479 (21%), Positives = 190/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN  ALL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGALLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|193216265|ref|YP_001997464.1| tetratricopeptide domain-containing protein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193089742|gb|ACF15017.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 365

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 233 FFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKA--GLYYMAS 286
           FF  G  + + Q  + A+    +     P  +  YYNL  +Y+  G++  A     Y+  
Sbjct: 82  FFNLGSAYYMMQAYDDAINAYIYAVKISPNYAEGYYNLGLAYYQSGNFYSAKDAFAYVVE 141

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
           ++  +        YY LG+  +++G  +SA+  ++K  ++ P+  +    LG  Y +L Q
Sbjct: 142 LRAGDSD-----AYYNLGKACVRIGLDKSAVDAYQKAADLDPNFIDAYYNLGLSYKRLEQ 196

Query: 347 IEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEV 405
            +KA   L KA +I   D   F  LGE    + D   A+ AF+ A  L        P E+
Sbjct: 197 YDKAVAALNKAVQIGANDPAIFFSLGECYQGAGDNNQAIVAFQNAFKL----NSNDP-EI 251

Query: 406 LNNIGVIHFEKGEFESAHQSFKDAL 430
           L  IGV H    E++ A ++F  AL
Sbjct: 252 LYQIGVSHVNLEEYDQAIRAFGSAL 276



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 141/339 (41%), Gaps = 49/339 (14%)

Query: 77  RIDMHEPST----WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           RI   EP      ++  G+L     + E+A+    ++ EA     P   G+A   FN G 
Sbjct: 36  RIMEMEPEKAAREFIRLGELYFKHKKYEKAA----VLFEAATTKNPT--GKAF--FNLGS 87

Query: 133 -------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
                  Y D++  Y  A+++ P+        +GL  Y+ G    A+ AF   ++L   +
Sbjct: 88  AYYMMQAYDDAINAYIYAVKISPNYAEGY-YNLGLAYYQSGNFYSAKDAFAYVVELRAGD 146

Query: 186 VEALVALAVMDLQANEAAGIRKGMEK-----MQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            +A   L          A +R G++K      Q+A ++ P      N++  ++     + 
Sbjct: 147 SDAYYNLG--------KACVRIGLDKSAVDAYQKAADLDP------NFIDAYYNLGLSYK 192

Query: 241 LVEQLTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
            +EQ  + A+A  N     G      +++L   Y   GD  +A + +  + K  +   E 
Sbjct: 193 RLEQY-DKAVAALNKAVQIGANDPAIFFSLGECYQGAGDNNQAIVAFQNAFKLNSNDPEI 251

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
           +   Y +G   + L ++  A+  F   L +  D  E    LG IY +  + + A     +
Sbjct: 252 L---YQIGVSHVNLEEYDQAIRAFGSALRMNKDFAECYYNLGIIYTKTHKYQNALYAYEQ 308

Query: 357 AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
             +I P +  A+ +LG   I++  G    A +T ++LLK
Sbjct: 309 VVRIQPENRTAYYNLGVAYINA--GDTESARRTYKSLLK 345


>gi|257094060|ref|YP_003167701.1| hypothetical protein CAP2UW1_2484 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046584|gb|ACV35772.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 784

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 18/244 (7%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LG I +++RE E     A   Y +A+++D      WV  GQ  + +G+  +A+ A +  L
Sbjct: 532 LGSIASERREWER----AENAYARATQLDGKLADDWVALGQARVQRGKAAEAAEALQRAL 587

Query: 111 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 170
             +     A    + +   RG Y+ +LE+ +RA Q+ P+   A     G    KL + G+
Sbjct: 588 AINPSQGTAYQALSALHGRRGDYTKALEYGERATQLEPTDYQAWS-NKGYSLLKLQRPGE 646

Query: 171 ARQAFQRALQLDPENVEALVALA---VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
           A  AF+ AL+L P+   A + L    +   Q  EA      +  +++A E+ P  + A  
Sbjct: 647 AVPAFETALRLKPDFANAWINLGEAKIAQRQMGEA------IAALRKALELSPGASDARL 700

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
           YL + +   GQ  L     E A  +    P     +Y +A +    GD E A +   A +
Sbjct: 701 YLTSAYIGAGQFALAR---EQATLLAEKVPQVPQVWYLMAVANAGLGDREAA-IAAHARL 756

Query: 288 KEIN 291
           K +N
Sbjct: 757 KSLN 760



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 148/366 (40%), Gaps = 54/366 (14%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           EK   +  A Q Y KA  ID   P  W   G +L   G  ++A+ AF+  +E +     A
Sbjct: 435 EKAGRYREAEQAYRKALAIDPRLPEAWHNLGLVLRRSGRDDEAAKAFETAIELNPRATGA 494

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
            +  A +    GR +++ E   RA +   +   A RL +G    +  +  +A  A+ RA 
Sbjct: 495 TIMLAELRQRAGRTAEAAELAARACEAADAQVAACRL-LGSIASERREWERAENAYARAT 553

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           QLD +  +  VAL    +Q  +AA   +  E +QRA  I                     
Sbjct: 554 QLDGKLADDWVALGQARVQRGKAA---EAAEALQRALAI--------------------- 589

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
                            P++  +Y  L+  +  +GDY KA L Y     ++ +P ++   
Sbjct: 590 ----------------NPSQGTAYQALSALHGRRGDYTKA-LEYGERATQL-EPTDYQA- 630

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +   G   LKL     A+  FE  L + PD       LG   +   Q+ +A   LRKA +
Sbjct: 631 WSNKGYSLLKLQRPGEAVPAFETALRLKPDFANAWINLGEAKIAQRQMGEAIAALRKALE 690

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTAR---TLLKKAGEEVPIEVLNNIGVIHFEK 416
           + P  + A + L    I +        F  AR   TLL +   +VP +V   + V +   
Sbjct: 691 LSPGASDARLYLTSAYIGAGQ------FALAREQATLLAEKVPQVP-QVWYLMAVANAGL 743

Query: 417 GEFESA 422
           G+ E+A
Sbjct: 744 GDREAA 749



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 143/353 (40%), Gaps = 26/353 (7%)

Query: 45  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 104
           G Y+  LG         +E    A   Y  A R    + S W G   L  A G+ ++A+ 
Sbjct: 321 GYYWGLLGDALRGLARPDE----AASAYATALRFSPGQASVWEGWADLAAAAGQGDEAAE 376

Query: 105 AFKIV--LEADRDNVPALLGQACVEFNRGRYSD-SLEFYKRALQVHPSCPGAIRLGIGLC 161
            +++   L  + D +   L QA V    G  +   L   K + +   +        +G  
Sbjct: 377 RYRVAVRLAPNADGLRRKLAQALVLRGEGAAAGRELAAVKDSGKADDA---KAWNNVGTG 433

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA---NEAAGIRKGMEKMQRAFEI 218
             K G+  +A QA+++AL +DP   EA   L ++  ++   +EAA      +  + A E+
Sbjct: 434 EEKAGRYREAEQAYRKALAIDPRLPEAWHNLGLVLRRSGRDDEAA------KAFETAIEL 487

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
            P    A   LA      G+     +L   A    +          ++A     + ++E+
Sbjct: 488 NPRATGATIMLAELRQRAGRTAEAAELAARACEAADAQVAACRLLGSIA---SERREWER 544

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A   Y  + +   K       +  LGQ +++ G    A    ++ L I P      +AL 
Sbjct: 545 AENAYARATQLDGK---LADDWVALGQARVQRGKAAEAAEALQRALAINPSQGTAYQALS 601

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTA 390
            ++ + G   KA E   +A +++P D QA+ + G  LL     G A+ AF+TA
Sbjct: 602 ALHGRRGDYTKALEYGERATQLEPTDYQAWSNKGYSLLKLQRPGEAVPAFETA 654


>gi|365880537|ref|ZP_09419902.1| putative TPR repeat protein [Bradyrhizobium sp. ORS 375]
 gi|365291400|emb|CCD92433.1| putative TPR repeat protein [Bradyrhizobium sp. ORS 375]
          Length = 1409

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 10/288 (3%)

Query: 87   VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
            V   + L ++GE+  A   FK++L     N  AL+G   +     R  ++ ++++RA+ V
Sbjct: 785  VAVAKKLQSRGEINDAEQIFKLILAGQPTNFDALVGLGMISTTFNRLDEAKDYFQRAVAV 844

Query: 147  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 206
            +     A    IG      G+   A + ++ AL L P +   L   A++  + N+   I 
Sbjct: 845  NDKSAEA-HGSIGAVEGSAGRYDAAVKHYETALSLSPSHPGILYGFAMV--RQNQGL-ID 900

Query: 207  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
            + M  ++RA +  P    A   L N  + TG+     +     L V +  P  + ++ N+
Sbjct: 901  EAMVLLRRAIDNKPQHLDAHFALGNLLYTTGKDV---EAARHYLKVLDFSPEHAETHNNI 957

Query: 267  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
            A     +G  E+A  +Y  ++    +P ++   Y  LG   L+L     ++      ++I
Sbjct: 958  ANVLLRQGHRERAIEHYKRAIA--GRP-DYGDAYGNLGNAFLELNRLEESIEQNLLAIKI 1014

Query: 327  YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             P+   +   LG  Y  LG+ E+A    +KA ++ P DA   ++L  +
Sbjct: 1015 KPERFGSYNNLGVAYQALGRFEEATAAFQKALELAPDDASIHLNLANM 1062



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 48/307 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 125
           A Q+   A  ID   P      G  L   G+ E+A S  +  L A      A   LG  C
Sbjct: 136 AVQHLELALAIDDTNPDLHQALGLALQRLGQFERAMSHHEAALAARPQFAAAAGSLGDVC 195

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
            +   GR+S+++  Y RAL + P  P  + L +G C   +G+L  A +  QRAL+++P  
Sbjct: 196 RQL--GRHSEAIAHYVRALAIEPKMP-MVLLNLGGCHQAIGELDAAIRTLQRALEMNPRL 252

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
            EA   L  + L      G    +   +RA  + P    A N   N    +G+H      
Sbjct: 253 AEAHYNLGNIHLDMKSWPG---ALFHYERAVTLRPDFPEAHNNFGNALESSGRH------ 303

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            E AL           S+Y+   +   + DY  A      S++ + +             
Sbjct: 304 -EEAL-----------SHYH--EALRLRPDYAVAHRNRADSLRNVQR------------- 336

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
                  +  A+T ++  LE  P +  T+  L  +   +G++++A+     A  ++PR  
Sbjct: 337 -------YDEAITGYQAALEHDPRDTTTMNHLAIVLTIVGRLDEARRTYEAALAVNPRSI 389

Query: 366 QAFIDLG 372
              ++ G
Sbjct: 390 GTHLNYG 396



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 13/265 (4%)

Query: 166  GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
            G++  A Q F+  L   P N +ALV L ++    N    + +  +  QRA  +    A A
Sbjct: 795  GEINDAEQIFKLILAGQPTNFDALVGLGMISTTFNR---LDEAKDYFQRAVAVNDKSAEA 851

Query: 226  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
               +       G++    +  ETAL+++   P+     Y  A    ++G  ++A +    
Sbjct: 852  HGSIGAVEGSAGRYDAAVKHYETALSLS---PSHPGILYGFAMVRQNQGLIDEAMVLLRR 908

Query: 286  SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
            ++   NKP + +  ++ LG +    G    A  ++ KVL+  P++ ET   + ++ ++ G
Sbjct: 909  AID--NKP-QHLDAHFALGNLLYTTGKDVEAARHYLKVLDFSPEHAETHNNIANVLLRQG 965

Query: 346  QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 405
              E+A E  ++A    P    A+ +LG   +  +    L+       L  K   E     
Sbjct: 966  HRERAIEHYKRAIAGRPDYGDAYGNLGNAFLELNR---LEESIEQNLLAIKIKPER-FGS 1021

Query: 406  LNNIGVIHFEKGEFESAHQSFKDAL 430
             NN+GV +   G FE A  +F+ AL
Sbjct: 1022 YNNLGVAYQALGRFEEATAAFQKAL 1046



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 6/129 (4%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG V  +LG    A+ ++ + L I P     L  LG  +  +G+++ A   L++A +++P
Sbjct: 191 LGDVCRQLGRHSEAIAHYVRALAIEPKMPMVLLNLGGCHQAIGELDAAIRTLQRALEMNP 250

Query: 363 RDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
           R A+A  +LG + +   +   AL  ++ A TL      + P E  NN G      G  E 
Sbjct: 251 RLAEAHYNLGNIHLDMKSWPGALFHYERAVTLRP----DFP-EAHNNFGNALESSGRHEE 305

Query: 422 AHQSFKDAL 430
           A   + +AL
Sbjct: 306 ALSHYHEAL 314


>gi|326434846|gb|EGD80416.1| hypothetical protein PTSG_11061 [Salpingoeca sp. ATCC 50818]
          Length = 850

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 26/262 (9%)

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           L + + +V+QA     + ++AD+ N  AL+ +    F R R  ++ E Y+ AL +  SC 
Sbjct: 467 LYILENDVKQAERYADLAMDADKYNHCALVNKGNCAFMRKRLEEAQELYQEALAIDSSCS 526

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
            A+   +GL    LG L  A + F R   L P+  E + A+A ++ Q ++     +  E 
Sbjct: 527 EAL-FNLGLVHRDLGNLEDALEYFHRVNLLVPDTPEVVAAIAALNEQLDDT---DQACEW 582

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH--------GPTKSHSY 263
                 + P    AL +L + F         ++L + + A   H            + S+
Sbjct: 583 YNTLISLVPSDPNALAHLGDMF---------DRLDDKSQAFQYHFEGFRYFPAEINTISW 633

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           +    SY+    Y +  + +     EI +P E  +    +     K G+++ AL  ++++
Sbjct: 634 FG---SYYIDSQYIQKAIQFFQRAVEI-QPGEVKWRLM-IASCHRKTGNYQRALETYKRI 688

Query: 324 LEIYPDNCETLKALGHIYVQLG 345
             ++P+N E LK L  +   +G
Sbjct: 689 HTLFPENIECLKFLIRLCTDMG 710


>gi|326431071|gb|EGD76641.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 753

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 149/367 (40%), Gaps = 53/367 (14%)

Query: 116 NVPALLGQ-ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLG 166
           NV AL        +++G+Y  ++ FY++AL +        HPS        +G   +  G
Sbjct: 212 NVAALYNNLGIANYSKGKYEKAIAFYEKALAITVEVLGEKHPSTADTYN-SLGAAYHSKG 270

Query: 167 QLGKARQAFQRALQL--------DPENVEALVALAVMDLQANEAAGIRKGME-----KMQ 213
           +  KA Q ++ AL +         P+  +    L+       E A   +  E     +++
Sbjct: 271 EYAKAIQQYENALAIRLETLGKKHPKTADIYNNLSAAYHSKGEYATAIQQYENALAIRLE 330

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS-----YYNLAR 268
              E +P  A   N L + +   GQ+       E ALA+      + HS     Y  L  
Sbjct: 331 TLGEKHPNTADTYNNLGSVYSSEGQYDKAIHFHEKALAIRVETLGEKHSRTASAYLGLGL 390

Query: 269 SYHSKGDYEKAGLYY---MASVKEI--NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           +Y  KGDY+KA  ++   +A   E+   K       Y  LG      G++  A+  +EK 
Sbjct: 391 AYQRKGDYDKAIHFHEKDLAITAEVLGEKHPSTADTYNNLGIAYRSKGEYGKAIDYYEKA 450

Query: 324 LEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQA 367
           L I        +P   +T   LG  Y   G  +KA     KA  I         P  A  
Sbjct: 451 LAIRVKALGEKHPSTADTYNNLGSAYDDKGDYDKAIAFYEKALAITVVVLGEKHPSTATT 510

Query: 368 FIDLGELLIS-SDTGAALDAFKTARTL-LKKAGEEVP--IEVLNNIGVIHFEKGEFESAH 423
           + +LGE   S  +   A++ ++ A  + ++  G + P   +  NNIG++H ++G+ E A 
Sbjct: 511 YNNLGEAYHSKGEYEKAIELYEKALAITVETLGVKHPDTADTCNNIGLLHNDRGDKEQAC 570

Query: 424 QSFKDAL 430
              + AL
Sbjct: 571 SYMQQAL 577


>gi|390438504|ref|ZP_10226967.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           (modular protein) [Microcystis sp. T1-4]
 gi|389838086|emb|CCI31091.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           (modular protein) [Microcystis sp. T1-4]
          Length = 1080

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 14/310 (4%)

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 124
           F+ A   Y++A  I       W+ +G  L   G  E+A +++   LE   D   A   + 
Sbjct: 166 FLGAIASYDRALEIKPDFHLAWLIRGFALDNLGRFEKAIASWDRALEIKPDLHEAWNNRG 225

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
               N GR+  ++  Y RAL+  P    A     G   Y LG+  +A  ++ RAL++ P+
Sbjct: 226 NALGNLGRFGQAIASYDRALEFKPDDHLAWN-NRGSALYYLGRFEQAIASYDRALEIKPD 284

Query: 185 NVEALVA--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
             EA     +A+ +L  +E A     +    RA EI P    A NY        G+    
Sbjct: 285 KHEAWYGRGVALGNLGRSEQA-----IASYDRALEIKPDYHDAWNYRGIALADLGR---F 336

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           EQ   +        P    ++YN      + G  E+A   Y  +++     H+    +YG
Sbjct: 337 EQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKPDLHQ---AWYG 393

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G     LG F  A+ +++  LEI PD  E     G+    LG+  +A     +A +  P
Sbjct: 394 RGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALADLGRFAEAIASYDRALEFKP 453

Query: 363 RDAQAFIDLG 372
            D +A+ + G
Sbjct: 454 DDHEAWNNRG 463



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 22/304 (7%)

Query: 79  DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           D+HE   W  +G  L   G   QA +++   LE   D+  A   +    +  GR+  ++ 
Sbjct: 216 DLHE--AWNNRGNALGNLGRFGQAIASYDRALEFKPDDHLAWNNRGSALYYLGRFEQAIA 273

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEAL--VALA 193
            Y RAL++ P    A   G G+    LG LG++ QA   + RAL++ P+  +A     +A
Sbjct: 274 SYDRALEIKPDKHEAW-YGRGVA---LGNLGRSEQAIASYDRALEIKPDYHDAWNYRGIA 329

Query: 194 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
           + DL   E A     +    +A EI P   +A     N     G    +E+   +     
Sbjct: 330 LADLGRFEQA-----IASFDQALEIKPDFHLAW---YNRGIELGNLGRLEEAIASYDRAL 381

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
              P    ++Y    +  + G +E+A   Y  +++     HE    +   G     LG F
Sbjct: 382 EIKPDLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHE---AWNNRGNALADLGRF 438

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
             A+ ++++ LE  PD+ E     G     LG++E+A     +A +I P   +A+ + G 
Sbjct: 439 AEAIASYDRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIKPDFHEAWGNRGW 498

Query: 374 LLIS 377
            + S
Sbjct: 499 AVCS 502


>gi|167391906|ref|XP_001739942.1| O-linked N-acetylglucosamine transferase, ogt [Entamoeba dispar
           SAW760]
 gi|165896156|gb|EDR23653.1| O-linked N-acetylglucosamine transferase, ogt, putative [Entamoeba
           dispar SAW760]
          Length = 434

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 33/285 (11%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALELNKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDTICIDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              L         + +  +    A+   N    K + ++ L R  H K D+ KA   Y  
Sbjct: 261 AIVLCEAAMKCNNYKVASEFANIAINYGNEQ-EKIYGHFTLGRIAHQKQDFIKAKEEYNI 319

Query: 286 SVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC--------ETLK 335
           +    NK     FP  +Y + QV  +  ++       EK+L     NC        + LK
Sbjct: 320 AYLSDNKCT---FPALHYRMAQVLFREKNY----IQVEKILM----NCLKYNGGDFDVLK 368

Query: 336 ALGHIYVQLGQIEKAQELLRKAA--KIDPRDAQAFIDLGELLISS 378
            LG   ++L +I +  E L KA+  KID +         EL++SS
Sbjct: 369 LLGFTELKLNKINETIEYLEKASVFKIDYKI--------ELIVSS 405


>gi|83719090|ref|YP_442157.1| TPR domain-containing protein [Burkholderia thailandensis E264]
 gi|83652915|gb|ABC36978.1| TPR domain protein [Burkholderia thailandensis E264]
          Length = 626

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G ++ A   ++  L  +  N  AL     +   +GR+ ++ +   RA+++ P+   A++L
Sbjct: 27  GRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAVELRPND-AALQL 85

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK--GMEKMQR 214
            +G     LG+L  A + F+ AL L PE       LA  +L    AA  R    ++  QR
Sbjct: 86  NLGNAFKALGRLDDAIERFRNALTLAPE-----FPLAHYNLGNAYAAQERHDDAVDAFQR 140

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           A  + P  A   N L N     G+H         AL +    P  + ++ NL  +  + G
Sbjct: 141 ALALAPGDASIHNNLGNALNALGRHGDALAAFRRALELR---PGHAGAHNNLGMALAALG 197

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           D E+A  ++ A++    +   F+  ++ LG     +G    AL+ FE  L + P     L
Sbjct: 198 DTEEAIAHFRAALAAEPR---FVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLAL 254

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             L +    LG+   A     +A  +DP    A+++LG
Sbjct: 255 FGLANALAALGRHRDALPHYERAVGLDPSFVLAWLNLG 292



 Score = 46.6 bits (109), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 18/236 (7%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIY 219
           ++ G+L  A   ++ AL  +P N +AL    V+  Q     EAA +      + RA E+ 
Sbjct: 24  HRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADL------VGRAVELR 77

Query: 220 PY-CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
           P   A+ LN L N F   G+   ++   E         P    ++YNL  +Y ++  ++ 
Sbjct: 78  PNDAALQLN-LGNAFKALGR---LDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDD 133

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A   +  ++            +  LG     LG    AL  F + LE+ P +      LG
Sbjct: 134 AVDAFQRALALAPGDASI---HNNLGNALNALGRHGDALAAFRRALELRPGHAGAHNNLG 190

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
                LG  E+A    R A   +PR   A  +LG  L +    A AL AF++A  L
Sbjct: 191 MALAALGDTEEAIAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALAL 246



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 122/303 (40%), Gaps = 20/303 (6%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           GR  D+   Y+ AL  +P+   A+ L  G+ R++ G+  +A     RA++L P +     
Sbjct: 27  GRLDDAEHGYRAALATNPANADALHL-FGVLRHQQGRHEEAADLVGRAVELRPNDA---- 81

Query: 191 ALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
           AL +    A +A G +   +E+ + A  + P   +A   L N +    +H       + A
Sbjct: 82  ALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRA 141

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
           LA+    P  +  + NL  + ++ G +  A L       E+   H     +  LG     
Sbjct: 142 LALA---PGDASIHNNLGNALNALGRHGDA-LAAFRRALELRPGHAGA--HNNLGMALAA 195

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           LGD   A+ +F   L   P        LG+    +G+  +A      A  + PR   A  
Sbjct: 196 LGDTEEAIAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLALF 255

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFK 427
            L   L      AAL   + A    ++A    P  VL   N+G  H   G  E A ++F 
Sbjct: 256 GLANAL------AALGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFD 309

Query: 428 DAL 430
            AL
Sbjct: 310 QAL 312



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 42  NALGVYYTYLGKIETKQREKEEHF--ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 99
           N LG+    LG  E    E   HF   LA +    A+  ++         G  L A G  
Sbjct: 187 NNLGMALAALGDTE----EAIAHFRAALAAEPRFVAAHFNL---------GNALDAVGRH 233

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            QA SAF+  L        AL G A      GR+ D+L  Y+RA+ + PS   A  L +G
Sbjct: 234 AQALSAFESALALQPRFPLALFGLANALAALGRHRDALPHYERAVGLDPSFVLAW-LNLG 292

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEA 188
              + LG    A +AF +AL+LDP +  A
Sbjct: 293 TAHHALGAHEMALRAFDQALRLDPSHALA 321


>gi|434402457|ref|YP_007145342.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
 gi|428256712|gb|AFZ22662.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
          Length = 496

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 139/346 (40%), Gaps = 28/346 (8%)

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
           N  P  + +YYN   +    GD   A   Y  ++K IN    F   YY  G  + KLGD 
Sbjct: 125 NINPNFADAYYNRGNARAELGDMPGAITDYDQAIK-INP--NFAVAYYNRGNARAKLGDM 181

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
           + A+T+F + + I P+  E     G +  +LG ++ A   L +A KI+P  A+A+ + G 
Sbjct: 182 QGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGT 241

Query: 374 LLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALG 431
           L         L   + A T L +A +  P   E   N G    E G+ ++A   F  A  
Sbjct: 242 LR------GKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQA-- 293

Query: 432 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 491
             I     D        +A A +    DMQ      +    + +  N      N   +  
Sbjct: 294 --IKTNPNDPLPYNNRANARAKL---GDMQ--GAITDFNQAININPNYANAYKNRGFVRA 346

Query: 492 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP--- 548
           ++ D   A   Y   +    +Y DAY           ++Q +I   N+A+ +N  +    
Sbjct: 347 KLGDMQGAITDYNQAININPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAY 406

Query: 549 ----NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLG 590
               NA   LGD++    D+ +A       +DA   +   A+L+LG
Sbjct: 407 FNRGNARYKLGDMQGAITDYNQAININPNFADAYLNR-GIASLALG 451



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/308 (20%), Positives = 129/308 (41%), Gaps = 22/308 (7%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y++A + + ++   +  +G      G++  A + +   +  + +   A   +       G
Sbjct: 86  YDQAIKTNPNDAQAYYNRGNARAELGDMPGAITDYDQAININPNFADAYYNRGNARAELG 145

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               ++  Y +A++++P+   A     G  R KLG +  A   F +A+ ++P   EA   
Sbjct: 146 DMPGAITDYDQAIKINPNFAVAY-YNRGNARAKLGDMQGAITDFNQAININPNYAEAYTN 204

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
              +     E   ++  +  + +A +I P  A A         +  +  L  +L +   A
Sbjct: 205 RGTLRA---ELGDMQGAITDLNQAIKINPNFAKA---------YYNRGTLRGKLGDMQGA 252

Query: 252 VTN------HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
           +T+        P  + +Y N   +    GD + A   +  ++K    P++ + PY     
Sbjct: 253 ITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKT--NPNDPL-PYNNRAN 309

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
            + KLGD + A+T+F + + I P+     K  G +  +LG ++ A     +A  I+P  A
Sbjct: 310 ARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAININPNYA 369

Query: 366 QAFIDLGE 373
            A+ + G 
Sbjct: 370 DAYFNRGN 377



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 34/336 (10%)

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           Q+T+   A+  + P  + +YYN   +    GD   A   Y    + IN    F   YY  
Sbjct: 82  QITDYDQAIKTN-PNDAQAYYNRGNARAELGDMPGAITDY---DQAININPNFADAYYNR 137

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G  + +LGD   A+T++++ ++I P+        G+   +LG ++ A     +A  I+P 
Sbjct: 138 GNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNARAKLGDMQGAITDFNQAININPN 197

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 423
            A+A+ + G L       A L   + A T L +A     I++  N    ++ +G      
Sbjct: 198 YAEAYTNRGTLR------AELGDMQGAITDLNQA-----IKINPNFAKAYYNRGTLRGKL 246

Query: 424 QSFKDALGD-GIWLTLLDSKTKTYVIDASASMLQFKDMQL----FHRFENDGNHVELPWN 478
              + A+ D    + +  + T+ Y    +A   +  DMQ     F++      +  LP+N
Sbjct: 247 GDMQGAITDLNQAIKINPNYTEAYGNRGNARA-ELGDMQTAITDFNQAIKTNPNDPLPYN 305

Query: 479 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 538
                 N A    ++ D   A   +   +    +Y +AY     +     ++Q +I   N
Sbjct: 306 ------NRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYN 359

Query: 539 EALKVNGKYP-------NALSMLGDLELKNDDWVKA 567
           +A+ +N  Y        NA   LGD++    D+ +A
Sbjct: 360 QAININPNYADAYFNRGNARYKLGDMQGAITDYNQA 395



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 141/331 (42%), Gaps = 13/331 (3%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y++A +I+ +    +  +G      G+++ A + F   +  + +   A   +  +    G
Sbjct: 154 YDQAIKINPNFAVAYYNRGNARAKLGDMQGAITDFNQAININPNYAEAYTNRGTLRAELG 213

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               ++    +A++++P+   A     G  R KLG +  A     +A++++P   EA   
Sbjct: 214 DMQGAITDLNQAIKINPNFAKAY-YNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGN 272

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
               + +A E   ++  +    +A +  P   +  N  AN     G   +   +T+   A
Sbjct: 273 RG--NARA-ELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGD--MQGAITDFNQA 327

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
           + N  P  +++Y N        GD + A   Y    + IN    +   Y+  G  + KLG
Sbjct: 328 I-NINPNYANAYKNRGFVRAKLGDMQGAITDYN---QAININPNYADAYFNRGNARYKLG 383

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           D + A+T++ + + I P+  +     G+   +LG ++ A     +A  I+P  A A+++ 
Sbjct: 384 DMQGAITDYNQAININPNFADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYLNR 443

Query: 372 G--ELLISSDTGAALDAFKTARTLLKKAGEE 400
           G   L +    GA  D  + A  L ++ G +
Sbjct: 444 GIASLALGDKQGAIADT-QQAVDLFQQQGNK 473


>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 379

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 165/374 (44%), Gaps = 44/374 (11%)

Query: 3   REYFKQGK----VEQFRQILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK 57
           R   KQGK    +++FR+ L+   ++PEI                   ++Y  +  ++ K
Sbjct: 24  RSSLKQGKYKEALKEFRKALKARPNNPEI-------------------LHYNAITLLKLK 64

Query: 58  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 117
           + EK      A + Y K  + +      W  KG +L   G  ++A   ++  L+ +    
Sbjct: 65  RPEK------ALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYA 118

Query: 118 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 177
            A   +A V    GRY ++LE Y++ALQ++P    A     G     L +  KA + F++
Sbjct: 119 GAWNNKALVLKELGRYDEALECYEKALQINPKLADAW-YNKGSVLIYLKKYKKALKCFEK 177

Query: 178 ALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
           A++L+P+N  A     + + +L+  E A     ++   +  ++ P    A N     F  
Sbjct: 178 AIELNPKNYRAWGTKGITLHNLKIYEEA-----LKCYDKVLQLNPQDDKAWNNKGLVFNE 232

Query: 236 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
            G++    +  E AL +    P  + ++ N        G YE+A   Y  ++ EI+   +
Sbjct: 233 LGRYDESLECYEKALQIN---PKLAEAWNNKGVVLSELGRYEEALECYEKAL-EIDPEDD 288

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
             +   GL  V  +LG ++ AL  F+K LEI P+  +  K  G I   L + E++ +  +
Sbjct: 289 KTWNNKGL--VLEELGKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYK 346

Query: 356 KAAKIDPRDAQAFI 369
           KA K++P      +
Sbjct: 347 KALKLNPPKQNTMV 360



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 20/307 (6%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           LL     E+A   ++ +L+ +     A   +  V    GRY ++LE Y++AL+++P   G
Sbjct: 60  LLKLKRPEKALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAG 119

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 212
           A      L   +LG+  +A + +++ALQ++P+  +A      + +   +     K  EK 
Sbjct: 120 AWN-NKALVLKELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEK- 177

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLAR 268
             A E+ P      NY A        H L  ++ E AL     V    P    ++ N   
Sbjct: 178 --AIELNPK-----NYRAWGTKGITLHNL--KIYEEALKCYDKVLQLNPQDDKAWNNKGL 228

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            ++  G Y+++   Y  ++ +IN   +    +   G V  +LG +  AL  +EK LEI P
Sbjct: 229 VFNELGRYDESLECYEKAL-QIN--PKLAEAWNNKGVVLSELGRYEEALECYEKALEIDP 285

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           ++ +T    G +  +LG+ + A E  +KA +I+P  A A+   G  +I  D     ++ K
Sbjct: 286 EDDKTWNNKGLVLEELGKYKDALECFQKALEINPEFADAWKWKG--IILEDLKKPEESLK 343

Query: 389 TARTLLK 395
             +  LK
Sbjct: 344 CYKKALK 350



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 15/304 (4%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G+  L +G+ ++A   F+  L+A  +N   L   A       R   +LE Y++ L+ +P 
Sbjct: 23  GRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKILKNNPK 82

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
              A     GL   +LG+  +A + +++AL+++P+   A    A++     E     + +
Sbjct: 83  LAEAWN-NKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALV---LKELGRYDEAL 138

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           E  ++A +I P  A A     +   +  ++    +  E A+ +    P    ++     +
Sbjct: 139 ECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELN---PKNYRAWGTKGIT 195

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
            H+   YE+A L     V ++N   +  +   GL  V  +LG +  +L  +EK L+I P 
Sbjct: 196 LHNLKIYEEA-LKCYDKVLQLNPQDDKAWNNKGL--VFNELGRYDESLECYEKALQINPK 252

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA---ALDA 386
             E     G +  +LG+ E+A E   KA +IDP D + + + G  L+  + G    AL+ 
Sbjct: 253 LAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKG--LVLEELGKYKDALEC 310

Query: 387 FKTA 390
           F+ A
Sbjct: 311 FQKA 314


>gi|410914070|ref|XP_003970511.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Takifugu rubripes]
          Length = 1036

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAIQLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 195/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAIQLYRKAL----------------------- 344

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F    +             NLA +L+Q      A + Y+  +     +
Sbjct: 345 -------EVFPEFAAAHS-------------NLASVLQQQGKLQEALMHYKEAIRISPTF 384

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 385 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 444

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 445 ALKLKPDFPDAYCNLA 460


>gi|425470514|ref|ZP_18849384.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9701]
 gi|389883845|emb|CCI35807.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9701]
          Length = 562

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 31/299 (10%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G  LLA GE E A SA++ VL    ++V A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDQLLAAGEKESALSAYRTVLSFHENSVQAHIKIAQVLQSQKRYSEALQAYNRGFIVND 103

Query: 149 SCPGAIRLGIGLCRYKLGQL-------GKARQAFQRALQLDPE-NVEALVALAVMDLQ-A 199
             P    L   L    LG +        +A  A+Q+A+ + P    +  +  A+  LQ  
Sbjct: 104 KPPMEPSLSNHLV--ALGDIFAQEEKWSEAIDAYQKAIMIKPTFKGQFQLGKALYSLQRW 161

Query: 200 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG--- 256
           +EAA      + +Q A  + P    A       +F+ G+ +  +QL + A          
Sbjct: 162 DEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWQEASYAYEQALEL 208

Query: 257 -PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
            P++   Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G   +
Sbjct: 209 IPSQGEIYKKLGEALGKQGKWQQAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLGA 265

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           A+  F++  +I P N    + L + Y+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 266 AMAVFQQARQISPKNANIYENLCYTYINSGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|307718491|ref|YP_003874023.1| hypothetical protein STHERM_c08010 [Spirochaeta thermophila DSM
           6192]
 gi|306532216|gb|ADN01750.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 382

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 136/320 (42%), Gaps = 17/320 (5%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G  LL +   E+A   F+ +LE DR N  AL+G       +G +  ++ +Y+  L+ +P
Sbjct: 36  EGYALLKQDRPEEAIIRFEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYP 95

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
               A+  G+  C     +  +A + +++ L+ D  NV  L  +A       +    ++ 
Sbjct: 96  GNNYAL-FGLADCYKAQERYREAIEIWEKYLKYDETNVTVLTRVADA---YRKTGNFKRS 151

Query: 209 MEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
            E   +  E+    PY  + L +L  H+ F      +      A+   +           
Sbjct: 152 KELYLKVLELDEGNPYALIGLGHL--HYDFKDYRTAISYWE--AILERDRDRVDIRVLTA 207

Query: 266 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
           +   +     YE+   Y++ ++++   PH F +  +GL      +GD R +L  +E++LE
Sbjct: 208 IGNCHRKLKQYERGIPYFLKALEK--DPHNF-YALFGLADCYRGVGDHRRSLQYWERILE 264

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 385
             P N   L   G  Y  LG + +A+E   +A  I   +  ++  LG  ++        +
Sbjct: 265 KDPHNKVILTRTGDAYRHLGDLARAEEYYHQALNI---EFDSYAILGLAMVHKARKEYRE 321

Query: 386 AFKTARTLLKKAGEEVPIEV 405
           A ++  T+L+   E   I +
Sbjct: 322 AAESLNTILRLDPENPKIYI 341



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 124/322 (38%), Gaps = 49/322 (15%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           + K   +D H     VG G     KGE ++A S ++  L     N  AL G A     + 
Sbjct: 53  FEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYPGNNYALFGLADCYKAQE 112

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           RY +++E +++ L+   +    +       R K G   ++++ + + L+LD  N  AL+ 
Sbjct: 113 RYREAIEIWEKYLKYDETNVTVLTRVADAYR-KTGNFKRSKELYLKVLELDEGNPYALIG 171

Query: 192 LAVM-------------------------DLQANEAAG--------IRKGMEKMQRAFEI 218
           L  +                         D++   A G          +G+    +A E 
Sbjct: 172 LGHLHYDFKDYRTAISYWEAILERDRDRVDIRVLTAIGNCHRKLKQYERGIPYFLKALEK 231

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS---YHSKGD 275
            P+   AL  LA+ +   G H    Q  E  L    H          L R+   Y   GD
Sbjct: 232 DPHNFYALFGLADCYRGVGDHRRSLQYWERILEKDPHNKVI------LTRTGDAYRHLGD 285

Query: 276 YEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
             +A  YY  ++  E +      +   GL  V     ++R A  +   +L + P+N +  
Sbjct: 286 LARAEEYYHQALNIEFDS-----YAILGLAMVHKARKEYREAAESLNTILRLDPENPKIY 340

Query: 335 KALGHIYVQLGQIEKAQELLRK 356
             L   Y+ L Q E+A+ +L++
Sbjct: 341 IELADCYLHLNQKEEARSVLKE 362



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K  +F  + + Y K   +D   P   +G G L     +   A S ++ +LE DRD V   
Sbjct: 144 KTGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILERDRDRVDIR 203

Query: 121 LGQACVEFNR--GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
           +  A    +R   +Y   + ++ +AL+  P    A+  G+  C   +G   ++ Q ++R 
Sbjct: 204 VLTAIGNCHRKLKQYERGIPYFLKALEKDPHNFYAL-FGLADCYRGVGDHRRSLQYWERI 262

Query: 179 LQLDPEN 185
           L+ DP N
Sbjct: 263 LEKDPHN 269


>gi|203287653|ref|YP_002222668.1| hypothetical protein BRE_192 [Borrelia recurrentis A1]
 gi|201084873|gb|ACH94447.1| uncharacterized conserved protein [Borrelia recurrentis A1]
          Length = 380

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 143/345 (41%), Gaps = 16/345 (4%)

Query: 78  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 137
           +D+ E S    +G  L+ +  + +A S F  +L+ D DN  AL+G   +E  +  +  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLFEAESLFNDILQKDDDNNYALVGLGDIERKKRNFDKAI 78

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 197
            +Y++ L  H +   A+  G+G C   LG   KA   ++  L+ D +N+  L  +A    
Sbjct: 79  IYYQKCLAKHSNNNYAL-FGLGDCYRSLGDYKKATDVWEEYLKYDSKNITVLTRVAS--- 134

Query: 198 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 257
              +    +K  +   R  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSRQSYLRVLELVPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYEINQVK 193

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
                  ++   Y    ++ K G+Y+     EI+ P+ F +  +GL        ++  AL
Sbjct: 194 IDVRLLTSIGNCYRKLKEFSK-GIYFFKRALEIS-PNNF-YAIFGLADCYRGSKEYAEAL 250

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
             +  +++  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 378 SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
            + G   +A    + L+K   +   + V  N+   +   G+ E A
Sbjct: 308 KEQGQYEEALIAIKNLIKTNPKNSILYV--NVAECYEALGQIEDA 350



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 53/232 (22%)

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA---------------- 316
           K +++KA +YY   + + +  +   +  +GLG     LGD++ A                
Sbjct: 71  KRNFDKAIIYYQKCLAKHSNNN---YALFGLGDCYRSLGDYKKATDVWEEYLKYDSKNIT 127

Query: 317 -----------LTNFEK-------VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
                      L NF+K       VLE+ PDN   L  +GH+Y    + ++A +   K  
Sbjct: 128 VLTRVASSYRKLKNFQKSRQSYLRVLELVPDNDYALVGIGHLYYDFKEYKEALKYWLKMY 187

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
           +I+    Q  ID+  L    +    L  F       K+A E  P    NN   I F   +
Sbjct: 188 EIN----QVKIDVRLLTSIGNCYRKLKEFSKGIYFFKRALEISP----NNFYAI-FGLAD 238

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTK-----TYVIDASASMLQFKDMQLFHR 465
                + + +AL    WLT++D   K     T V D    +  +++ Q++++
Sbjct: 239 CYRGSKEYAEAL--KYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYK 288


>gi|408790965|ref|ZP_11202576.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
           serovar Hardjo str. Went 5]
 gi|408464994|gb|EKJ88718.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
           serovar Hardjo str. Went 5]
          Length = 700

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 174/413 (42%), Gaps = 83/413 (20%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG +  K++  EE    A +Y+ KA   + +EP  +       L+ G+   A +A K
Sbjct: 323 YYNLGLVYLKKKVPEE----AAKYFQKALDSNANEPEVYRYIADAFLSMGQTNMAITALK 378

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP----SCPGAIRLGIGLCRY 163
             L     +V +L   + + + +G   ++   ++R +++ P    S    + LGI L   
Sbjct: 379 KALLLKPSDVDSLFALSELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILD-- 436

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           ++ +  ++  +F+ AL L+P+N  A   L +  L A +     + + K Q          
Sbjct: 437 EMERYSESITSFEGALALNPKNQSAYYNLGLAYLHAGKPTMAIESLRKSQ---------- 486

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG--DYEKAGL 281
            AL+   NH             T++ LA+ +         Y L   ++S+   +YE+A  
Sbjct: 487 -ALD--PNH-------------TQSRLAIAD---------YYLENRFYSEAIAEYEEAIA 521

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF---EKVLEIYPDNCETLK--A 336
           +         KP         L + +LKL D      N+   EKVL    +N +  K   
Sbjct: 522 W---------KPE--------LYEARLKLADVYIQTKNYPAAEKVLVYVLENAKDPKEIK 564

Query: 337 LGHIYVQL--------GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
           L H  + L        G   KA+E   +A  IDP D ++ + L ++LI  D+G+ +D  K
Sbjct: 565 LAHRKLALSYASSGNSGLSRKAKEEAFRATHIDPEDMESKLVLSKILI--DSGSLVDREK 622

Query: 389 TARTLLKKAGEEVPIEVL----NNIGVIHFEKGEFESAHQSFKDALGDGIWLT 437
               L      +V   +     N +GV +F+ GEF+ A  SF+ A+     LT
Sbjct: 623 AIEELTVITRSDVTPTISSKAHNYLGVCYFKNGEFKKALSSFQTAIDLNPSLT 675



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 16/291 (5%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G L    G+   A  A+K        +V      A     +G  ++++  +++ +Q  P
Sbjct: 221 QGNLFQEIGDPASAIEAYKEGQSLAPTDVTLTYNLAISYLKQGNIAEAISEFQKVVQTAP 280

Query: 149 SCPGAI-RLG-IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ---ANEAA 203
           +   A+   G +G   Y+     +A   F+  ++L   + ++   L ++ L+     EAA
Sbjct: 281 NSQTAVLSYGHLGTIFYQREDYDRAEFYFREVIRLKTNDAKSYYNLGLVYLKKKVPEEAA 340

Query: 204 G-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
              +K ++      E+Y        Y+A+ F   GQ  +     + AL +    P+   S
Sbjct: 341 KYFQKALDSNANEPEVY-------RYIADAFLSMGQTNMAITALKKALLLK---PSDVDS 390

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
            + L+  Y+ KG+  +A   +   ++           Y  LG +  ++  +  ++T+FE 
Sbjct: 391 LFALSELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESITSFEG 450

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
            L + P N      LG  Y+  G+   A E LRK+  +DP   Q+ + + +
Sbjct: 451 ALALNPKNQSAYYNLGLAYLHAGKPTMAIESLRKSQALDPNHTQSRLAIAD 501



 Score = 46.6 bits (109), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 8/172 (4%)

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
           SY +L   ++ + DY++A  Y+   ++ + N        YY LG V LK      A   F
Sbjct: 288 SYGHLGTIFYQREDYDRAEFYFREVIRLKTNDAKS----YYNLGLVYLKKKVPEEAAKYF 343

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
           +K L+   +  E  + +   ++ +GQ   A   L+KA  + P D  +   L EL      
Sbjct: 344 QKALDSNANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFALSELYYKK-- 401

Query: 381 GAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 431
           G  ++A    R +++   G+        N+G+I  E   +  +  SF+ AL 
Sbjct: 402 GELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESITSFEGALA 453


>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 466

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 152/347 (43%), Gaps = 16/347 (4%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G L   KGEVE+A S +   ++ +  +  A   +A     +G    ++  Y +A+Q++P
Sbjct: 100 RGNLYDQKGEVEKAISDYTEAIKLNPKDAWAYAKRAADYHKKGDSEKAISDYTQAIQINP 159

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
                     G          KA   + + ++L+P+ V A  +  +      +   + K 
Sbjct: 160 KDANYYD-SRGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGD---MDKA 215

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQ-HFLVEQLTETALAVTNHGPTKSHSYYNLA 267
           +  +    ++ P  A A       +   G     V   +E    +    PT S  Y + A
Sbjct: 216 IRDLSEVIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSE----LIKLKPTDSIGYDSRA 271

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
            +Y ++G  ++A   +  ++K +N      F   GL  + +  GD+  A+ NF K +++ 
Sbjct: 272 TAYQNQGKLDEALADFSEAIK-LNDKDAGAFHNRGL--IYVGKGDWEKAIENFSKSIQLN 328

Query: 328 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 387
           P + +     G+ Y Q G+ +K  + + +A +++P+DA+++ +L     +    A++   
Sbjct: 329 PQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNPKDAESYNNLAWFRATC-PDASMRKG 387

Query: 388 KTARTLLKKAGEEVPIEVLNNIGVI---HFEKGEFESAHQSFKDALG 431
           K A    KKA E    +  + IG +   + E G+FE A +  K A+G
Sbjct: 388 KEAVEAGKKACELTNWKEWHCIGTLAAAYAETGDFEQAVKYQKQAMG 434



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 107/253 (42%), Gaps = 24/253 (9%)

Query: 36  ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLA 95
           ++++  N+ G+ Y   G ++   R+  E             +++  +   +  +G     
Sbjct: 194 KQVSAYNSRGLAYAMKGDMDKAIRDLSEVI-----------KLNPKDAPAYGSRGLSYAM 242

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           KG+ ++A S F  +++    +      +A    N+G+  ++L  +  A++++    GA  
Sbjct: 243 KGDWDKAVSDFSELIKLKPTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFH 302

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
              GL     G   KA + F +++QL+P++ +A         Q  E    +KG++ +  A
Sbjct: 303 -NRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKGE---YQKGIDDINEA 358

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTET------ALAVTNHGPTKSHSYYNLARS 269
             + P  A + N LA  F  T     + +  E       A  +TN    + H    LA +
Sbjct: 359 LRLNPKDAESYNNLA-WFRATCPDASMRKGKEAVEAGKKACELTNW--KEWHCIGTLAAA 415

Query: 270 YHSKGDYEKAGLY 282
           Y   GD+E+A  Y
Sbjct: 416 YAETGDFEQAVKY 428


>gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1122

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 91/430 (21%), Positives = 181/430 (42%), Gaps = 74/430 (17%)

Query: 4   EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 63
           EYF QGK EQ   IL    S ++++Y AD  ++              +G I  ++ E + 
Sbjct: 402 EYFMQGKQEQ--AILNLKQSIKLNKYDADSHFK--------------IGYIYYEKGEDD- 444

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR---DNVPAL 120
              +A  Y+ +A +I+ +    +   G +   + + E A   +   ++ +    DN   L
Sbjct: 445 ---IAINYFKQAIKINPYYEQAYNMIGNIYNYQQKQEDAIIWYDKAIQLNPNFGDNYNNL 501

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
             Q    +N+ ++  +L +++++ +   +   A  +  GLC   L Q  +A Q +Q+A++
Sbjct: 502 GLQY---YNQKQFDQALWYFQKSAEKSKNLVNA-YVNQGLCYQNLNQQDEAIQQYQKAIE 557

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           +DP   +A   LA++     +   +++ +E+ Q A ++                      
Sbjct: 558 VDPNFSDAHYNLALI---YYDKKLMKESIEQYQIAIDV---------------------- 592

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
                           P+   +YYN+  +YHS   Y++A   Y  ++K     +  I   
Sbjct: 593 ---------------KPSSYDAYYNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNAI--- 634

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y LG     LG +  +L  + +  ++ PD  +   + G  Y +L +  +A +  ++A K+
Sbjct: 635 YNLGVTYYDLGQYEESLKYYSQAYDLNPDFVDICYSTGLSYEKLNKYPEALDWYKRAIKL 694

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
           DP     F  L ++ +          F T    L +  E   ++    +GVI F++ + +
Sbjct: 695 DPLYMDPFKRLIDIYVKEGRQEEAIEFLTKGIGLAEKNE---VQYF-YLGVIKFKELKLD 750

Query: 421 SAHQSFKDAL 430
            A Q FK A+
Sbjct: 751 EAMQFFKQAI 760



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 20/254 (7%)

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
             ++F   +  ++++F+K+A++ +PS   A    +GLC YK     +A + +  A +L P
Sbjct: 740 GVIKFKELKLDEAMQFFKQAIEKNPSLEDA-HFNLGLCYYKQKNYDEAIREYLIADELKP 798

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLV 242
              +    L +      E    +K   K   + ++ P YC        + +F  G  +  
Sbjct: 799 NQSDLSYNLGITYYYRKELEEAKKWYLK---SIQLNPNYC--------DAYFNLGIVYYE 847

Query: 243 EQLTETALAVTNHGPTKSHSY----YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
           EQ  E A+ +          +    YN + +Y    D E+  +Y+     EI+   + I 
Sbjct: 848 EQNYEEAIQMYKKSFELDSKFADACYNTSITYDKLNDSEQC-IYWSEKAIEIDP--KCID 904

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            Y  LGQ+  KL +   AL  + K++++ PD+   L  LG  Y  L    +A E+  K  
Sbjct: 905 TYKFLGQIFSKLDNNEKALKIYLKLVDLLPDDENALYNLGITYQLLHMYNEAIEVFEKGY 964

Query: 359 KIDPRDAQAFIDLG 372
           KI+P       +LG
Sbjct: 965 KINPNQCDLLYNLG 978



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 117/528 (22%), Positives = 214/528 (40%), Gaps = 65/528 (12%)

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
           V    P    +Y ++   Y+  GD   +   +  S+ E+NK +     YY LG      G
Sbjct: 351 VIEINPNSYETYSSIGYCYYIIGDTINSEESFKKSI-ELNKNYSR--AYYYLGCEYFMQG 407

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
               A+ N ++ +++   + ++   +G+IY + G+ + A    ++A KI+P   QA+  +
Sbjct: 408 KQEQAILNLKQSIKLNKYDADSHFKIGYIYYEKGEDDIAINYFKQAIKINPYYEQAYNMI 467

Query: 372 GELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           G +         A+  +  A  L    G+       NN+G+ ++ + +F+ A   F+ + 
Sbjct: 468 GNIYNYQQKQEDAIIWYDKAIQLNPNFGDNY-----NNLGLQYYNQKQFDQALWYFQKSA 522

Query: 431 GDGIWLTLLDSKTKTYVIDASASMLQFKDM--------QLFHRFENDGNHVELPWNKVTV 482
                      K+K  V       L ++++        Q     E D N  +  +N   +
Sbjct: 523 ----------EKSKNLVNAYVNQGLCYQNLNQQDEAIQQYQKAIEVDPNFSDAHYNLALI 572

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
            ++   + E I     A      I  K   Y DAY  +     +      +I+    A+K
Sbjct: 573 YYDKKLMKESIEQYQIA------IDVKPSSY-DAYYNMGIAYHSLQQYDEAIQSYKNAIK 625

Query: 543 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKD-----SYAT-LSLGNWN-YF 595
           +   Y NA+  LG   +   D  + +E+ +  S A D         Y+T LS    N Y 
Sbjct: 626 IKANYNNAIYNLG---VTYYDLGQYEESLKYYSQAYDLNPDFVDICYSTGLSYEKLNKYP 682

Query: 596 AALRNEKRAPKLEATHLEKAKEL---YTRVIVQHTSNLYAANGAGVVLAEKGQ---FDVS 649
            AL   KRA KL+  +++  K L   Y +   Q  +  +   G G  LAEK +   F + 
Sbjct: 683 EALDWYKRAIKLDPLYMDPFKRLIDIYVKEGRQEEAIEFLTKGIG--LAEKNEVQYFYLG 740

Query: 650 KDLFTQVQEAASGSVFVQ-------MPDVWINLAHVYFAQGNFALAMKMY--QNCLRKFY 700
              F +++   +   F Q       + D   NL   Y+ Q N+  A++ Y   + L+   
Sbjct: 741 VIKFKELKLDEAMQFFKQAIEKNPSLEDAHFNLGLCYYKQKNYDEAIREYLIADELKP-- 798

Query: 701 YNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVA 748
               + +   L  T+Y  ++ ++ KK  L++I L P+     F+ G+ 
Sbjct: 799 --NQSDLSYNLGITYYYRKELEEAKKWYLKSIQLNPNYCDAYFNLGIV 844



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 6/116 (5%)

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-EL 374
           A+  F+KV+EI P++ ET  ++G+ Y  +G    ++E  +K+ +++   ++A+  LG E 
Sbjct: 344 AIEKFKKVIEINPNSYETYSSIGYCYYIIGDTINSEESFKKSIELNKNYSRAYYYLGCEY 403

Query: 375 LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +      A+   K +  L K   +         IG I++EKGE + A   FK A+
Sbjct: 404 FMQGKQEQAILNLKQSIKLNKYDADSHF-----KIGYIYYEKGEDDIAINYFKQAI 454


>gi|113477836|ref|YP_723897.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110168884|gb|ABG53424.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 1061

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 149/347 (42%), Gaps = 27/347 (7%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGK--GQLLLAKGEVEQASSAFKIVLEADRDNVP 118
           +E  F  A  YY KA  I+ +   TW  +  G+ L   G +E+A ++F+  +  D  +  
Sbjct: 14  REGKFESAIAYYQKA--IEENPQFTWSYQNLGEALEKTGRIEEAIASFRQAVAIDPQSHC 71

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
            L         +G++ +++ + +RA+ ++ + P    LG+G    KL Q  +A +   +A
Sbjct: 72  FLYKLGITLSRQGQFQEAVGYLRRAIDLNKNVP-EFYLGLGAALVKLRQWSEAVECIHQA 130

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA-------FEIYPYCAMALNYLAN 231
           L++  E V  L   A+        A  + G E+   A       +EIYPY        A 
Sbjct: 131 LRVLDEKVGTLYERALQAEGYFYLAEAKSGQEQWSDAIKLYSQSWEIYPYRVNCCISWAV 190

Query: 232 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
                G+      L   A+A +         Y+ L ++      +E+A       V E  
Sbjct: 191 ALGKLGRWSEAVALYRQAVAFSGE---SGEVYFGLGKALGQLKQWEEA-------VVEYR 240

Query: 292 KPHEFIF----PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 347
           +  +F F      + LG   L+L  +  A+  +  V+E+ P        LG+  +QL   
Sbjct: 241 RGIDFGFDGAEVRHSLGYAFLQLKKWEEAIVEYRLVVEVDPKFAPVRHQLGYALMQLEHW 300

Query: 348 EKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 393
           E+A   LR+A ++ PR A  +  LG++L    + G A +A++ A  L
Sbjct: 301 EEAVIELRQAVELYPRSAIVWQQLGDVLWQLEEDGEAEEAYQKATEL 347


>gi|427727407|ref|YP_007073644.1| hypothetical protein Nos7524_0123 [Nostoc sp. PCC 7524]
 gi|427363326|gb|AFY46047.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
          Length = 516

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 155/378 (41%), Gaps = 62/378 (16%)

Query: 5   YFKQGKV----EQFRQILEE-GSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQR 59
           YF +G +    E+F + LE+   + +I+ Y+A+  Y R        +  +YLG +E    
Sbjct: 81  YFMRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCR-------SIARSYLGDVEGAVN 133

Query: 60  EKEEHFILATQYYNKASRIDMHEPST-----WVGKGQLLLAKGEVEQASSAFKIVLEADR 114
           +  + +I      +  S ++ H+  +     +  KG      G++E+A   F   L    
Sbjct: 134 DFNQ-YIFNKDDSSCYSHVNKHQNDSKLAEAFFNKGLYCAESGDLEEAIQNFNQALNIQS 192

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
               A   +  +  N G   +++  + ++L + P    A     G+ R +LG L  A + 
Sbjct: 193 QYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKNFIAY-YNRGIARAELGYLEAATED 251

Query: 175 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           F +++ ++P+  EA     V+     +   I+K ++  ++A  I                
Sbjct: 252 FTKSISINPKFAEAYNNRGVI---CRKLGDIKKAIKDFKKAINI---------------- 292

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
                                    +++Y+NLA SY    D + A   Y  +V  +  P+
Sbjct: 293 ---------------------NSNYANAYHNLAFSYQQLRDMKGAIEAYTQTV--LINPN 329

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           +    YY  G V+  LGD + A+ +F + L + P+  ++    G +  QLG IE A E  
Sbjct: 330 D-AQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEGAIEDF 388

Query: 355 RKAAKIDPRDAQAFIDLG 372
            +A  I P   +A+ + G
Sbjct: 389 NRALYISPGFDEAYSNRG 406



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 98/462 (21%), Positives = 177/462 (38%), Gaps = 78/462 (16%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G +  +++ Y++A++++ +   A     G+   KLG L  A + +  A+ ++ +  EA  
Sbjct: 24  GDFEGAIKDYEQAIRINSNLAQAY-YNRGMAFAKLGNLEDAIEDYDEAIYINEDFAEAYF 82

Query: 191 ALAVMDLQANEAAGIRK---GMEKMQRAFEIYPYCA-------MALNYLA------NHFF 234
                 ++ N  AG+ K    +E    A +I PY A       +A +YL       N F 
Sbjct: 83  ------MRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIARSYLGDVEGAVNDF- 135

Query: 235 FTGQHFLVEQLTETALAVTNHGPTK--SHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
              Q+   +  +     V  H      + +++N        GD E+A   +    + +N 
Sbjct: 136 --NQYIFNKDDSSCYSHVNKHQNDSKLAEAFFNKGLYCAESGDLEEAIQNFN---QALNI 190

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
             ++   YY  G +   LGD + A+ +F K L + P N       G    +LG +E A E
Sbjct: 191 QSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKNFIAYYNRGIARAELGYLEAATE 250

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 412
              K+  I+P+ A+A+                                      NN GVI
Sbjct: 251 DFTKSISINPKFAEAY--------------------------------------NNRGVI 272

Query: 413 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 472
             + G+ + A + FK A+        ++S       + + S  Q +DM+     E     
Sbjct: 273 CRKLGDIKKAIKDFKKAIN-------INSNYANAYHNLAFSYQQLRDMK--GAIEAYTQT 323

Query: 473 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 532
           V +  N     +N   +   + DT  A   +   L    +Y  ++     +     +++ 
Sbjct: 324 VLINPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEG 383

Query: 533 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
           +IE  N AL ++  +  A S  G+   K  DW  A E +  A
Sbjct: 384 AIEDFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQA 425


>gi|118371952|ref|XP_001019174.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89300941|gb|EAR98929.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 772

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 12/250 (4%)

Query: 116 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           N   L  QA  E +  +Y ++    +R ++++      + L +GL   +  Q  ++R   
Sbjct: 307 NQTELFQQAQKEIDNHKYQEAQVTLERLVKINTHNDQYLAL-LGLTHLEQYQCEESRSIS 365

Query: 176 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
           Q+ L ++P+N    +AL+ M     E   +++ M  +Q+   + P    AL Y A  F  
Sbjct: 366 QKCLSINPKNE---IALSCMGYYYYEKNDLKQAMCYLQKCLNLNPKNYRALTYKA--FVL 420

Query: 236 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
           + Q  L E+L     A++ +     +S   + + Y  K  YE A    + S K++ K   
Sbjct: 421 SNQQKLDEELLTLKEAIS-YNQNYPYSILQIGKCYFKKKMYEDA----ITSFKQVIKLLP 475

Query: 296 FIF-PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
            IF PYY LG +  +  +F  +++ F K LE+   N   L +L  +Y++      A E+L
Sbjct: 476 TIFSPYYCLGIIYYERSEFDQSISYFNKALELNSSNQNCLYSLAKVYLETFNYSNAIEIL 535

Query: 355 RKAAKIDPRD 364
               ++ P +
Sbjct: 536 NTLVRLFPSN 545



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 28/301 (9%)

Query: 83  PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 142
           P + +  G+    K   E A ++FK V++              + + R  +  S+ ++ +
Sbjct: 444 PYSILQIGKCYFKKKMYEDAITSFKQVIKLLPTIFSPYYCLGIIYYERSEFDQSISYFNK 503

Query: 143 ALQVHPSCPGAIRLGIGLCRYKLGQL-------GKARQAFQRALQLDPENVEALVALAVM 195
           AL+++ S           C Y L ++         A +     ++L P N    + LA +
Sbjct: 504 ALELNSSNQN--------CLYSLAKVYLETFNYSNAIEILNTLVRLFPSND---LYLATL 552

Query: 196 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
            L  +E    +K ME  Q++ +I P   +ALN LA ++F   Q+ L  Q  ++++ V   
Sbjct: 553 ALAYSEIKDEQKVMEFSQKSLQINPQNILALNCLAYYYFLKQQNQLAIQCLQSSIKV--- 609

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQLKLGDF 313
            P    +Y+  A+   S+G +E A L    S+++ +K     FP   + LGQV  ++G  
Sbjct: 610 NPCNFRAYFYQAQILLSEGKHEDAILSAKYSMQQNSK-----FPNAQFLLGQVFEQIGKM 664

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
             A+  F++ + I          L  IY + GQ + A  + + A + + + A+ + +LG+
Sbjct: 665 DKAIKYFQEAIMIQAKYELPYIDLSQIYRKKGQYDDALFICKLALQNNIKSAKIYNELGK 724

Query: 374 L 374
           +
Sbjct: 725 I 725


>gi|340623460|ref|YP_004741913.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
 gi|339903728|gb|AEK19170.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
          Length = 344

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 71/319 (22%), Positives = 138/319 (43%), Gaps = 20/319 (6%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           +++ +   YN A   +      WV KG  LL  G   ++   F   L  D +N  A  G 
Sbjct: 40  NYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESRECFNKALLIDSENSEAFNGL 99

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
             V    G Y  +LE Y ++L ++     A +   G+    +    +A + F +++ ++ 
Sbjct: 100 GTVLSKTGNYQKALEMYDKSLNINSENSEAWK-NKGITLTNMQSYSEAIECFDKSISINA 158

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           +N          D+  N+     K + + +++ + Y    +    +       G  +L  
Sbjct: 159 KN---------SDVWYNKGEAQFK-LGQYEKSIDSYNKALLIDEKMETALLGKGNSYLKL 208

Query: 244 QLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
           Q  E+A+   N      P   +  Y  A +Y    ++E A  YY  ++ EIN  +  +  
Sbjct: 209 QNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEDALKYYDEAL-EINPSNADVLI 267

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
             G+   ++K  ++ +A++NF+  ++I P N +     G+ YV L   E +    +KA +
Sbjct: 268 NKGICFDKMK--NYSAAISNFDLAIQIDPKNVQIWILKGNSYVGLKDYESSISCYKKALE 325

Query: 360 IDPR--DAQAFIDLGELLI 376
           I+P+  +A+  ID+ E +I
Sbjct: 326 IEPKNENAKENIDIIEKII 344


>gi|124006078|ref|ZP_01690914.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123988255|gb|EAY27908.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 316

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 32/265 (12%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LGV Y +L        +K E  I+A   Y KA  I     + W+  G +    G+   A 
Sbjct: 47  LGVNYEWL--------DKYEEAIIA---YQKAIEIKPGYENAWINLGVVYKGLGKYNDAI 95

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           +A++  +E + +   A         + G+Y D++  Y+RA+++ P+   A  + +G+   
Sbjct: 96  TAYQKAIEINPNFEQAWANLGVTYDDLGKYEDAIVAYQRAIEIRPNYEKA-WVNLGVVYK 154

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQANEAAGIRKGMEKMQRAFEIYPY 221
            LG+   A  A+Q+A+ + P+  +A + L V   DL   E A     +   Q+A E    
Sbjct: 155 SLGKYDDAIAAYQKAIGIKPDFEQAWINLGVTYDDLNNYEEA-----IVAYQKAIEFNSA 209

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
               L  +   +F  G+       +++A          SHS  NL   Y ++GD +KA  
Sbjct: 210 NKELLLDIGWLYFIQGK-------SQSAKPYFEQSIELSHSQMNLGHVYLTEGDAQKAME 262

Query: 282 YYMASVKEINKPHEFI------FPY 300
           +Y  S+  I    EF       FPY
Sbjct: 263 FYQQSLHNIEDKAEFFEGFQSDFPY 287



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 20/284 (7%)

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSD 135
           RI  ++   W+  G      G+ E A  A++  +   R N         V +    +Y +
Sbjct: 1   RIQPNDEDIWINLGVAYEGLGKYEDAIVAYQKAI-GIRPNYEKAWFNLGVNYEWLDKYEE 59

Query: 136 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
           ++  Y++A+++ P    A  + +G+    LG+   A  A+Q+A++++P   +A   L V 
Sbjct: 60  AIIAYQKAIEIKPGYENA-WINLGVVYKGLGKYNDAITAYQKAIEINPNFEQAWANLGVT 118

Query: 196 --DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
             DL   E A     +   QRA EI P    A   L   +   G++       + A+ + 
Sbjct: 119 YDDLGKYEDA-----IVAYQRAIEIRPNYEKAWVNLGVVYKSLGKYDDAIAAYQKAIGIK 173

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
              P    ++ NL  +Y    +YE+A + Y  +++  +   E +     +G +    G  
Sbjct: 174 ---PDFEQAWINLGVTYDDLNNYEEAIVAYQKAIEFNSANKELLLD---IGWLYFIQGKS 227

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           +SA   FE+ +E+      +   LGH+Y+  G  +KA E  +++
Sbjct: 228 QSAKPYFEQSIEL----SHSQMNLGHVYLTEGDAQKAMEFYQQS 267



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 17/199 (8%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P    +++NL  +Y     YE+A + Y  ++ EI   +E    +  LG V   LG +  A
Sbjct: 38  PNYEKAWFNLGVNYEWLDKYEEAIIAYQKAI-EIKPGYEN--AWINLGVVYKGLGKYNDA 94

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           +T ++K +EI P+  +    LG  Y  LG+ E A    ++A +I P   +A+++LG +  
Sbjct: 95  ITAYQKAIEINPNFEQAWANLGVTYDDLGKYEDAIVAYQRAIEIRPNYEKAWVNLGVVYK 154

Query: 377 S-SDTGAALDAFKTARTLLKKAGEEVPIEV------LNNI--GVIHFEKG-EFESAHQSF 426
           S      A+ A++ A   +K   E+  I +      LNN    ++ ++K  EF SA+   
Sbjct: 155 SLGKYDDAIAAYQKAIG-IKPDFEQAWINLGVTYDDLNNYEEAIVAYQKAIEFNSAN--- 210

Query: 427 KDALGDGIWLTLLDSKTKT 445
           K+ L D  WL  +  K+++
Sbjct: 211 KELLLDIGWLYFIQGKSQS 229


>gi|407784362|ref|ZP_11131519.1| TPR repeat-containing protein, partial [Oceanibaculum indicum P24]
 gi|407197053|gb|EKE67170.1| TPR repeat-containing protein, partial [Oceanibaculum indicum P24]
          Length = 382

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 27/272 (9%)

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G+L +A   +++ L  D +  +AL  L  ++     A   + G+E ++RA  + P  A  
Sbjct: 37  GKLAEAETLYRQILLQDQKQPDALHLLGQIERHKGNA---QAGLEMIERAIALRPESAPF 93

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
                N     G+          AL +    P  + ++ NL       GD ++A  ++  
Sbjct: 94  RMTRGNTLRVMGKRAAAIAAYREALEIN---PDFADAHNNLGVILLEAGDAQEAADHFRR 150

Query: 286 SVKEINKPHEFIFPYY-----GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        I P Y      LG     LGD   A+  F++ LE+ P+       LG +
Sbjct: 151 ALE--------IRPAYPDASNNLGNALKALGDIEGAIQRFKRTLEMAPNAVSAWTNLGSL 202

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 400
           Y ++GQ +   E  RKA  I+P  A+A  +LG +L  +D G     +  AR  L+KA E 
Sbjct: 203 YHKIGQWDSCTECYRKALSINPNSAEAHGNLGTIL--ADWG----RYDEARQHLEKAIEL 256

Query: 401 VP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            P   E L ++G    E+G        F  AL
Sbjct: 257 RPNFPEALMSLGHALIEQGHGFEGEMRFLKAL 288



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 1/126 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  ++ +A  I    P      G  L A G++E A   FK  LE   + V A      + 
Sbjct: 144 AADHFRRALEIRPAYPDASNNLGNALKALGDIEGAIQRFKRTLEMAPNAVSAWTNLGSLY 203

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G++    E Y++AL ++P+   A    +G      G+  +ARQ  ++A++L P   E
Sbjct: 204 HKIGQWDSCTECYRKALSINPNSAEA-HGNLGTILADWGRYDEARQHLEKAIELRPNFPE 262

Query: 188 ALVALA 193
           AL++L 
Sbjct: 263 ALMSLG 268


>gi|148658023|ref|YP_001278228.1| hypothetical protein RoseRS_3925 [Roseiflexus sp. RS-1]
 gi|148570133|gb|ABQ92278.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 1180

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 152/382 (39%), Gaps = 62/382 (16%)

Query: 90   GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
            GQ+LL  G+V  A   F+  + ++  +VPA L  A +    G    +   Y+ AL    S
Sbjct: 763  GQVLLELGDVPLAERQFEAAVNSNPRHVPAHLALAQLARRAGNDRAAARRYEAALDAGAS 822

Query: 150  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE-----ALVALAVMDLQANEAAG 204
             P  +   IG+   +L +   A  A++RA+   P +       AL  L V  L A     
Sbjct: 823  DPAVLE-QIGMTLLELREYNAAVMAYERAIAQQPASATLRYGAALAYLGVGRLDA----- 876

Query: 205  IRKGMEKMQRAFE---IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
                 E  +RA E   +YP    AL  L +     G+    EQ    AL      P+ + 
Sbjct: 877  ---AYESARRALERRNVYPE---ALALLGDIALQRGKLAEAEQQYRAAL---QQNPSLAA 927

Query: 262  SYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFI----------------------- 297
            ++  L R   + G++  A  +++ +V+ E   P   +                       
Sbjct: 928  AHIGLGRVAATGGNWSIAAGHFLNAVQGEPQSPDALLWLGEARLRTADIDGAIAAYSEAL 987

Query: 298  -----FP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
                 FP  Y+GL Q +   G    AL N  + LE+ P   E    LG IY + G   +A
Sbjct: 988  HLRDNFPEAYFGLAQAEYGAGRIEDALRNATRALELRPRYAEAALLLGKIYERQGYSMRA 1047

Query: 351  QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNN 408
             E  ++A  I+PR A+       LLI +D          AR  L+ A    P   E    
Sbjct: 1048 LEAYKRAIDINPRLAEPHYRRALLLIRADR------LNEAREELEVATRLDPNFAEAHYW 1101

Query: 409  IGVIHFEKGEFESAHQSFKDAL 430
            +G ++F +   ++A   F++A+
Sbjct: 1102 LGRVYFAQRNIQAALNRFREAV 1123



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 6/172 (3%)

Query: 64   HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP-ALLG 122
            ++ +A  ++  A + +   P   +  G+  L   +++ A +A+   L   RDN P A  G
Sbjct: 941  NWSIAAGHFLNAVQGEPQSPDALLWLGEARLRTADIDGAIAAYSEALHL-RDNFPEAYFG 999

Query: 123  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
             A  E+  GR  D+L    RAL++ P    A  L +G    + G   +A +A++RA+ ++
Sbjct: 1000 LAQAEYGAGRIEDALRNATRALELRPRYAEAALL-LGKIYERQGYSMRALEAYKRAIDIN 1058

Query: 183  PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
            P   E     A++ ++A+    + +  E+++ A  + P  A A  +L   +F
Sbjct: 1059 PRLAEPHYRRALLLIRADR---LNEAREELEVATRLDPNFAEAHYWLGRVYF 1107


>gi|425447216|ref|ZP_18827207.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
 gi|389732284|emb|CCI03758.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
          Length = 605

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 32/303 (10%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y KA  I+      +  +G + L   + E+A +     +E +     A   +  V +   
Sbjct: 306 YTKAIEINPQYAEAYKNRGIVYLYLKDYEKAMADNNKAIEINPQYSNAYNNRGNVYYKLK 365

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 190
            Y  ++  Y +A++++P    A     G   Y L +  KA   + + ++++P++ EA   
Sbjct: 366 EYDKAMADYNKAIEINPQLFQAYD-NRGSFYYNLKEYDKAIADYNKVIEINPQDAEAYYK 424

Query: 191 -ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
                 DL+  E     K ++   +A EI P  A       + ++  G  + + +  + A
Sbjct: 425 RGYVYYDLKDYE-----KAIKDYNKAIEINPQNA-------DSYYLRGSFYYILKEYDKA 472

Query: 250 LAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----Y 300
           +   N      P  + +Y N    YH+  +Y+KA       +K+ NK  E I P     Y
Sbjct: 473 IKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKA-------IKDYNKALE-INPQYADAY 524

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y  G V L L ++  A+ ++ K +EI P   +     G +Y  L   EKA +   KA +I
Sbjct: 525 YTRGNVYLHLKEYDKAIKDYNKAIEINPQYADAYNNRGVVYEILKDYEKAIKDYNKALEI 584

Query: 361 DPR 363
           +P+
Sbjct: 585 NPQ 587



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 132/313 (42%), Gaps = 36/313 (11%)

Query: 129 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           N  +Y  ++  Y +A++++P    A +   G+    L    KA     +A++++P+   A
Sbjct: 295 NNNQYDKAIAAYTKAIEINPQYAEAYK-NRGIVYLYLKDYEKAMADNNKAIEINPQYSNA 353

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
                 +  +  E     K M    +A EI P    A +   + ++   ++       + 
Sbjct: 354 YNNRGNVYYKLKE---YDKAMADYNKAIEINPQLFQAYDNRGSFYYNLKEY-------DK 403

Query: 249 ALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP----- 299
           A+A    V    P  + +YY     Y+   DYEKA       +K+ NK  E I P     
Sbjct: 404 AIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKA-------IKDYNKAIE-INPQNADS 455

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           YY  G     L ++  A+ ++ K +EI P N       G++Y  L + +KA +   KA +
Sbjct: 456 YYLRGSFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKAIKDYNKALE 515

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 417
           I+P+ A A+   G + +       L  +  A     KA E  P   +  NN GV++    
Sbjct: 516 INPQYADAYYTRGNVYLH------LKEYDKAIKDYNKAIEINPQYADAYNNRGVVYEILK 569

Query: 418 EFESAHQSFKDAL 430
           ++E A + +  AL
Sbjct: 570 DYEKAIKDYNKAL 582



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 132/329 (40%), Gaps = 43/329 (13%)

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
           T + +Y+     Y +   Y+KA   Y  ++ EIN   ++   Y   G V L L D+  A+
Sbjct: 281 TTAETYFKQGEDYRNNNQYDKAIAAYTKAI-EINP--QYAEAYKNRGIVYLYLKDYEKAM 337

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
            +  K +EI P         G++Y +L + +KA     KA +I+P+  QA+ + G    +
Sbjct: 338 ADNNKAIEINPQYSNAYNNRGNVYYKLKEYDKAMADYNKAIEINPQLFQAYDNRGSFYYN 397

Query: 378 SDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 435
                 L  +  A     K  E  P   E     G ++++  ++E A + +  A+     
Sbjct: 398 ------LKEYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKAIKDYNKAI----- 446

Query: 436 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH-VEL-PWNKVT------VLFNLA 487
             +      +Y +  S   +    ++ + +   D N  +E+ P N +       V  NL 
Sbjct: 447 -EINPQNADSYYLRGSFYYI----LKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLK 501

Query: 488 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 547
              + I D       Y   L     Y DAY     +         +I+  N+A+++N +Y
Sbjct: 502 EYDKAIKD-------YNKALEINPQYADAYYTRGNVYLHLKEYDKAIKDYNKAIEINPQY 554

Query: 548 PNALS-------MLGDLELKNDDWVKAKE 569
            +A +       +L D E    D+ KA E
Sbjct: 555 ADAYNNRGVVYEILKDYEKAIKDYNKALE 583


>gi|307611344|emb|CBX01005.1| hypothetical protein LPW_27071 [Legionella pneumophila 130b]
          Length = 577

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 149/367 (40%), Gaps = 29/367 (7%)

Query: 20  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 76
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAR 66

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQEAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILH 185

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           L+ N  A   +   K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLAEAEQAFHKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPNNLEYL---YNSGVAQMALGHLNEA 296

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLESDHTPSLNNLAAIYLKMDMRETAREYLERALAINPDDV-----VSRHML 351

Query: 377 SSDTGAA 383
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|334131406|ref|ZP_08505170.1| Tetratricopeptide TPR_2 repeat protein [Methyloversatilis
           universalis FAM5]
 gi|333443573|gb|EGK71536.1| Tetratricopeptide TPR_2 repeat protein [Methyloversatilis
           universalis FAM5]
          Length = 568

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 13/276 (4%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  L A G +++A  AF   ++A+  +   L     V+  RGR  ++L  Y RAL +   
Sbjct: 50  GSALAALGRLDEAEQAFAGAVKANPGSAELLSNLGLVQQQRGRLQEALSTYTRALAIRRD 109

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL-AVMDLQANEAAGIRKG 208
            P  +   +G+ +  LG+L +A  +++RA+ L P    AL  L +V+D Q      I   
Sbjct: 110 FP-ELLYNLGVVQDALGRLDEAATSYRRAIALQPRFAVALFNLGSVLDRQGARGEAI--- 165

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
            E  +RA E  P    A + L      +G+    EQ         +  PT + +++NL  
Sbjct: 166 -EVYRRAVEAEPGFVEAWSNLGAALQQSGE---AEQAVRCYQKALDIQPTAT-AWFNLGT 220

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
           +  + G    A   Y    + I    E+   +  LG++    GD    L  F   L I P
Sbjct: 221 AQRAFGLIMDAAESYR---RAIALAPEYADAHSNLGEILRDQGDGEGTLAAFRAALAIDP 277

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
           D+      LG ++  L + +KA     KA  +D  D
Sbjct: 278 DHGGAHYNLGLLHHDLHEYDKALPCFEKAGVLDADD 313



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG VQ + G  + AL+ + + L I  D  E L  LG +   LG++++A    R+A  + P
Sbjct: 83  LGLVQQQRGRLQEALSTYTRALAIRRDFPELLYNLGVVQDALGRLDEAATSYRRAIALQP 142

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 420
           R A A  +LG +L     GA  +A +  R    +A E  P  +E  +N+G    + GE E
Sbjct: 143 RFAVALFNLGSVL--DRQGARGEAIEVYR----RAVEAEPGFVEAWSNLGAALQQSGEAE 196

Query: 421 SAHQSFKDAL 430
            A + ++ AL
Sbjct: 197 QAVRCYQKAL 206



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 23/306 (7%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           +N GR ++++   ++    +P+    +   +G     LG+L +A QAF  A++ +P + E
Sbjct: 20  YNAGRLAEAVTAARQLAARYPAAV-VVHSVLGSALAALGRLDEAEQAFAGAVKANPGSAE 78

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQ 244
            L  L ++  Q      +++ +    RA  I   +P     L  + +     G+  L E 
Sbjct: 79  LLSNLGLVQQQRGR---LQEALSTYTRALAIRRDFPELLYNLGVVQDAL---GR--LDEA 130

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
            T    A+    P  + + +NL      +G   +A   Y  +V+   +P  F+  +  LG
Sbjct: 131 ATSYRRAIALQ-PRFAVALFNLGSVLDRQGARGEAIEVYRRAVEA--EP-GFVEAWSNLG 186

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
               + G+   A+  ++K L+I P        LG      G I  A E  R+A  + P  
Sbjct: 187 AALQQSGEAEQAVRCYQKALDIQPTATAWFN-LGTAQRAFGLIMDAAESYRRAIALAPEY 245

Query: 365 AQAFIDLGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 423
           A A  +LGE+L     G   L AF+ A  +    G         N+G++H +  E++ A 
Sbjct: 246 ADAHSNLGEILRDQGDGEGTLAAFRAALAIDPDHG-----GAHYNLGLLHHDLHEYDKAL 300

Query: 424 QSFKDA 429
             F+ A
Sbjct: 301 PCFEKA 306


>gi|405973205|gb|EKC37931.1| hypothetical protein CGI_10009705 [Crassostrea gigas]
          Length = 749

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 171/408 (41%), Gaps = 32/408 (7%)

Query: 34  RYERIAILNALGV--------YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 85
           R ER A  + L +         Y+ LG +  ++ + +E    A + Y  A R+       
Sbjct: 56  RLERSAYFSQLAIKQNPMLAEAYSNLGNVFKERGQLQE----ALENYRHAVRLKPDFIDG 111

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRA 143
           ++     L+A G++EQA  A+   L+ + D   V + LG        GR  ++   Y +A
Sbjct: 112 YINLAAALVAAGDMEQAVQAYVTALQYNPDLYCVRSDLGNLLKAL--GRLDEAKTCYLKA 169

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 203
           ++  P+   A    +G      G++  A   F++A+ LDP  ++A + L  +     EA 
Sbjct: 170 IETQPNFAVAWS-NLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNV---LKEAR 225

Query: 204 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
              + +    RA  + P  A+    LA  ++  G   L++   +T        P    +Y
Sbjct: 226 IFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQG---LIDLAIDTYKRAIELQPNFPDAY 282

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            NLA +   KG   +A   Y  ++K ++  H        L  ++ + G+   A+  + K 
Sbjct: 283 CNLANALKEKGKVVEAEECYNTALK-LSPTHADSL--NNLANIKREQGNTEEAVKLYLKA 339

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGA 382
           LE+YP+       L  +  Q G++ +A    ++A +I P  A A+ ++G  L    D   
Sbjct: 340 LEVYPEFAVAHSNLASVLQQQGKLHEALMHYKEAIRISPTFADAYSNMGNTLKEMQDIQG 399

Query: 383 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           AL  +  A  +          +  +N+  IH + G    A  S++ AL
Sbjct: 400 ALQCYTRAIQI-----NPAFADAHSNLASIHKDSGNIPEAIASYRTAL 442



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 135/332 (40%), Gaps = 48/332 (14%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 176 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAV 231

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           +A+   L    ++       ACV + +G    +++ YKRA+++ P+ P A    +     
Sbjct: 232 AAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAIDTYKRAIELQPNFPDAY-CNLANALK 290

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + G++ +A + +  AL+L P + ++L  LA +     E     + ++   +A E+YP  A
Sbjct: 291 EKGKVVEAEECYNTALKLSPTHADSLNNLANIK---REQGNTEEAVKLYLKALEVYPEFA 347

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
           +A                                   HS  NLA     +G   +A ++Y
Sbjct: 348 VA-----------------------------------HS--NLASVLQQQGKLHEALMHY 370

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++    P  F   Y  +G    ++ D + AL  + + ++I P   +    L  I+  
Sbjct: 371 KEAIRI--SP-TFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKD 427

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            G I +A    R A K+ P    A+ +L   L
Sbjct: 428 SGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 459



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 97/454 (21%), Positives = 190/454 (41%), Gaps = 29/454 (6%)

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
           DN   LL  + + F   R   S  F + A++ +P    A    +G    + GQL +A + 
Sbjct: 39  DNTGVLLLLSSIHFQCRRLERSAYFSQLAIKQNPMLAEAYS-NLGNVFKERGQLQEALEN 97

Query: 175 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--YCAMALNYLANH 232
           ++ A++L P+ ++  + LA   + A +   + + ++    A +  P  YC  +   L N 
Sbjct: 98  YRHAVRLKPDFIDGYINLAAALVAAGD---MEQAVQAYVTALQYNPDLYCVRS--DLGNL 152

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
               G+   +++     L      P  + ++ NL   ++++G+   A  ++    K +  
Sbjct: 153 LKALGR---LDEAKTCYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFE---KAVAL 206

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
              F+  Y  LG V  +   F  A+  + + L + P++      L  +Y + G I+ A +
Sbjct: 207 DPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAID 266

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 412
             ++A ++ P    A+ +L   L   + G  ++A +   T LK +      + LNN+  I
Sbjct: 267 TYKRAIELQPNFPDAYCNLANAL--KEKGKVVEAEECYNTALKLSPTHA--DSLNNLANI 322

Query: 413 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDAS-ASMLQFKDMQLFHRFENDGN 471
             E+G  E A +         ++L  L+   +  V  ++ AS+LQ +  +L     +   
Sbjct: 323 KREQGNTEEAVK---------LYLKALEVYPEFAVAHSNLASVLQ-QQGKLHEALMHYKE 372

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
            + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N+ 
Sbjct: 373 AIRISPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIP 432

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 565
            +I     ALK+   +P+A   L        DW 
Sbjct: 433 EAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT 466


>gi|156401113|ref|XP_001639136.1| predicted protein [Nematostella vectensis]
 gi|156226262|gb|EDO47073.1| predicted protein [Nematostella vectensis]
          Length = 993

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 150/348 (43%), Gaps = 20/348 (5%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRA 143
           ++     L+A G++E A  A+   L+ + D   V + LG        GR  ++   Y +A
Sbjct: 122 YINLAAALVAAGDLEGAVHAYATALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKA 179

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 203
           ++  PS   A    +G      G++  A   F++A+QLDP  ++A + L  +     EA 
Sbjct: 180 IETQPSFAVAWS-NLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNV---LKEAR 235

Query: 204 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
              + +    RA  + P  A+    LA  ++  G   L++   +T        P    +Y
Sbjct: 236 IFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQG---LIDLAVDTYRRAIELQPNFPDAY 292

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            NLA +   +G   +A   Y  ++ +++  H        L  ++ + G    ++  + K 
Sbjct: 293 CNLANALKEQGKVSEAEECYNTAL-QLSPTHADSL--NNLANIKREQGKIEESIRLYCKA 349

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGA 382
           LEI+P+       L  +  Q G++++A    ++A +I P  A AF ++G LL    D   
Sbjct: 350 LEIFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQG 409

Query: 383 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A+  +  A  +          +  +N+  +H + G    A QS++ AL
Sbjct: 410 AIQCYSRAIQI-----NPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 452



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 162/400 (40%), Gaps = 32/400 (8%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
           Y+ G   +A Q   +  + +P+N   L+ L+ +  Q      + +       A +  P  
Sbjct: 28  YQSGNYDRAEQICMQLWRREPDNTGVLLLLSSIHFQCRR---LDRSAHFSTLAIKQNPML 84

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEK 278
           A A + L N F   GQ        + ALA   H     P     Y NLA +  + GD E 
Sbjct: 85  AEAYSNLGNVFKERGQ-------LKDALANYRHAVKLKPDFIDGYINLAAALVAAGDLEG 137

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A ++  A+  + N   +       LG +   LG    A   + K +E  P        LG
Sbjct: 138 A-VHAYATALQYNP--DLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPSFAVAWSNLG 194

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKA 397
            ++   G+I  A     KA ++DP    A+I+LG +L  +     A+ A+  A  L    
Sbjct: 195 CVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNH 254

Query: 398 GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 457
                  V  N+  +++E+G  + A  +++ A+       L  +    Y   A+A   Q 
Sbjct: 255 AV-----VHGNLACVYYEQGLIDLAVDTYRRAI------ELQPNFPDAYCNLANALKEQG 303

Query: 458 KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
           K   +    E     ++L       L NLA +  +      +  LY   L  + ++  A+
Sbjct: 304 K---VSEAEECYNTALQLSPTHADSLNNLANIKREQGKIEESIRLYCKALEIFPEFAAAH 360

Query: 518 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 557
             LA++ + +  LQ ++    EA++++  + +A S +G+L
Sbjct: 361 SNLASVLQQQGKLQEALLHYKEAIRIHPTFADAFSNMGNL 400



 Score = 43.9 bits (102), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 183/473 (38%), Gaps = 82/473 (17%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   +  +G  + A   Y  +VK
Sbjct: 55  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPMLAEAYSNLGNVFKERGQLKDALANYRHAVK 113

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 114 L--KP-DFIDGYINLAAALVAAGDLEGAVHAYATALQYNPDLYCVRSDLGNLLKALGRLE 170

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                                V N 
Sbjct: 171 EAKACYLKAIETQPSFAVAWSNLGC-------------------------------VFNA 199

Query: 409 IGVIHFEKGEFESAHQ---SFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFH 464
            G I      FE A Q   +F DA     ++ L +   +  + D A A+ L+  ++    
Sbjct: 200 QGEIWLAIHHFEKAVQLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALNLS--- 251

Query: 465 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
                 NH  +  N   V +    L++   DT      YR  +    ++ DAY  LA   
Sbjct: 252 -----PNHAVVHGNLACVYYEQG-LIDLAVDT------YRRAIELQPNFPDAYCNLANAL 299

Query: 525 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 584
           K +  +  + E  N AL+++  + ++L+ L +++ +     K +E+ R    A +    +
Sbjct: 300 KEQGKVSEAEECYNTALQLSPTHADSLNNLANIKREQG---KIEESIRLYCKALEIFPEF 356

Query: 585 ATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 644
           A     + N  + L+ + +        L++A   Y   I  H +   A +  G +L E  
Sbjct: 357 AA---AHSNLASVLQQQGK--------LQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQ 405

Query: 645 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
               +   +++  +     +     D   NLA V+   GN   A++ Y+  L+
Sbjct: 406 DIQGAIQCYSRAIQ-----INPAFADAHSNLASVHKDSGNIPEAIQSYRTALK 453


>gi|332706151|ref|ZP_08426221.1| hypothetical protein LYNGBM3L_14950 [Moorea producens 3L]
 gi|332355087|gb|EGJ34557.1| hypothetical protein LYNGBM3L_14950 [Moorea producens 3L]
          Length = 1693

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 186/433 (42%), Gaps = 55/433 (12%)

Query: 49  TYLGKIETKQREKEEHFILATQYYNKASRI-----DMHEPSTWVGKGQLLLAKGE-VEQA 102
           T LG +    R +E+ +  A  YY +A  I     +  + ST +G    L  K E  +QA
Sbjct: 459 TTLGNLAELYRNQEQ-YDQAIDYYQQALAIHREVKNQADESTTLGNIATLYQKQEQYDQA 517

Query: 103 SSAFKIVLEADRD--------NVPALLGQACVEFNRGRYSDSLEFYKRALQV-----HPS 149
            + ++ VL   R+        +  A +GQ  V + +G Y  ++ +Y++AL +     + +
Sbjct: 518 LNYYQKVLAIHREVKNQVQEWSTLAKIGQ--VYYQQGNYQQTINYYQQALAISKKIDNLT 575

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQ----LDPENVEALVALAVMDLQANEAAGI 205
             GA   GIG   Y  G+ G+A   +Q+AL+    L+  ++EA + L  + L        
Sbjct: 576 GEGANLWGIGQAYYAWGKPGQAIDYYQQALEIYRKLNNTSIEASI-LGGLGLAQISQGKY 634

Query: 206 RKGMEKMQRAFEIYPYC------AMALNYLANHFFFTGQHFLVEQLTETALAV---TNHG 256
            + ++  Q+   I           +ALN++   + + G++       + AL +    N  
Sbjct: 635 DQALKSYQQLLAIARQIKEPSQEIIALNFIGQVYEYQGKYDQALNYYQQALTIAKEINDQ 694

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASV---KEINKPHEFIFPYYGLGQVQLKLGDF 313
            T      N+   Y + G Y +A  YY  ++   K +N   +       +G +    G +
Sbjct: 695 KTTVDLLNNIGVVYSNWGKYNQALDYYQQTLTISKSLNDSIKIATILNNIGWIYDGYGKY 754

Query: 314 RSALTNFEKVLEIYP-------DNCET-LKALGHIYVQLGQIEKAQELLRKAAKID---- 361
             AL  +++ L I         DN  T    +GH+Y   G+ ++A E  ++A  I     
Sbjct: 755 SQALDYYQQALAINQELGDLRRDNVATNFTNIGHVYHSQGEYDRANEYFQQALAISKDIG 814

Query: 362 --PRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKG 417
              ++A    ++G +  S  +   A + F+ +  + ++ G+       LNNIG I + +G
Sbjct: 815 YRSQEANILNNIGSVYDSQGEYDRANEYFQQSLAISQEIGDRSGESTTLNNIGFIDYARG 874

Query: 418 EFESAHQSFKDAL 430
           E+  A + F  AL
Sbjct: 875 EYAQALEYFHQAL 887



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 86/398 (21%), Positives = 170/398 (42%), Gaps = 59/398 (14%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD------N 116
           +++  A + Y K +   + E S   G G   +++G+ +QA  +++ +L   R        
Sbjct: 599 DYYQQALEIYRKLNNTSI-EASILGGLGLAQISQGKYDQALKSYQQLLAIARQIKEPSQE 657

Query: 117 VPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSC---PGAIRL--GIGLCRYKLGQLG 169
           + AL  +GQ   E+ +G+Y  +L +Y++AL +          + L   IG+     G+  
Sbjct: 658 IIALNFIGQ-VYEY-QGKYDQALNYYQQALTIAKEINDQKTTVDLLNNIGVVYSNWGKYN 715

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
           +A   +Q+ L +     +++    ++    N    I  G  K  +A + Y   A+A+N  
Sbjct: 716 QALDYYQQTLTISKSLNDSIKIATIL----NNIGWIYDGYGKYSQALDYYQ-QALAIN-- 768

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY---MAS 286
                        ++L +            + ++ N+   YHS+G+Y++A  Y+   +A 
Sbjct: 769 -------------QELGDL------RRDNVATNFTNIGHVYHSQGEYDRANEYFQQALAI 809

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD------NCETLKALGHI 340
            K+I    +       +G V    G++  A   F++ L I  +         TL  +G I
Sbjct: 810 SKDIGYRSQEANILNNIGSVYDSQGEYDRANEYFQQSLAISQEIGDRSGESTTLNNIGFI 869

Query: 341 YVQLGQIEKAQELLRKAAKIDP------RDAQAFIDLGELLIS-SDTGAALDAFKTARTL 393
               G+  +A E   +A  I         +A    ++G + IS  D   AL+  + +  +
Sbjct: 870 DYARGEYAQALEYFHQALVIQQDLGKRFEEATTLGNIGTVYISWGDYAKALNYHQQSLKI 929

Query: 394 LKKAGEEVPIEV-LNNIGVIHFEKGEFESAHQSFKDAL 430
            +  G++  +   LNNIG I+ ++GE+E   +  + AL
Sbjct: 930 KQDIGDKRGVGANLNNIGRIYTDQGEYERGLKYLQQAL 967



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 105/481 (21%), Positives = 172/481 (35%), Gaps = 135/481 (28%)

Query: 36   ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEP-----STWVGKG 90
            + I  LN +G  Y Y GK +      ++   +A +  ++ + +D+        S W    
Sbjct: 656  QEIIALNFIGQVYEYQGKYDQALNYYQQALTIAKEINDQKTTVDLLNNIGVVYSNW---- 711

Query: 91   QLLLAKGEVEQASSAFKIVLEA-----DRDNVPALLGQ-ACVEFNRGRYSDSLEFYKRAL 144
                  G+  QA   ++  L       D   +  +L     +    G+YS +L++Y++AL
Sbjct: 712  ------GKYNQALDYYQQTLTISKSLNDSIKIATILNNIGWIYDGYGKYSQALDYYQQAL 765

Query: 145  QVHPSCPGAIR--------LGIGLCRYKLGQLGKARQAFQRALQLDPE--------NVEA 188
             ++    G +R          IG   +  G+  +A + FQ+AL +  +        N+  
Sbjct: 766  AINQEL-GDLRRDNVATNFTNIGHVYHSQGEYDRANEYFQQALAISKDIGYRSQEANILN 824

Query: 189  LVALAVMDLQ-----ANE----------AAGIRKGMEKMQRAFEIYPYC----AMALNYL 229
             +  +V D Q     ANE            G R G            Y     A AL Y 
Sbjct: 825  NIG-SVYDSQGEYDRANEYFQQSLAISQEIGDRSGESTTLNNIGFIDYARGEYAQALEYF 883

Query: 230  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
              H     Q  L ++  E     T  G        N+   Y S GDY KA  Y+  S+K 
Sbjct: 884  --HQALVIQQDLGKRFEEA----TTLG--------NIGTVYISWGDYAKALNYHQQSLK- 928

Query: 290  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE----------------- 332
                            ++  +GD R    N   +  IY D  E                 
Sbjct: 929  ----------------IKQDIGDKRGVGANLNNIGRIYTDQGEYERGLKYLQQALAIQQE 972

Query: 333  ---------TLKALGHIYVQLGQIEKAQELLRKAAKI--DPRDAQA-----------FID 370
                      L+ +G +Y   G+  KA E  +KA  I  D  D              ++D
Sbjct: 973  IGDRPTEAANLRNIGTVYSHWGKYPKALEYHQKALAIRQDIGDQAGIGTTYNSIGANYLD 1032

Query: 371  LGELLISSDTGAALDAFKTARTLLKKAGEEVPI-EVLNNIGVIHFEKGEFESAHQSFKDA 429
            LG      D   ALD F  A+ +  K G +  I E L NIG ++ ++  +  + ++++ +
Sbjct: 1033 LG------DYSQALDYFNQAQAIFTKIGAKEGIAETLTNIGTVYQKQENYPKSLENYQQS 1086

Query: 430  L 430
            L
Sbjct: 1087 L 1087


>gi|444917855|ref|ZP_21237942.1| hypothetical protein D187_00628 [Cystobacter fuscus DSM 2262]
 gi|444710648|gb|ELW51625.1| hypothetical protein D187_00628 [Cystobacter fuscus DSM 2262]
          Length = 379

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 4/120 (3%)

Query: 256 GPT-KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
           GP  ++  YY    + + +G++E+A L   AS+KE++ P +   P   +G+V L +G   
Sbjct: 26  GPKERAEGYYIKGTTEYLQGNFEQA-LASFASMKELS-PDDPRLPA-AIGEVYLSMGKLN 82

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            AL  F+  L+  P        +G I+ QLG  E+AQ  LRKA  I PRD  A   LGEL
Sbjct: 83  EALAQFQLALQRDPKRSTNWSRVGFIHAQLGHTEEAQSALRKALAIYPRDFNALEQLGEL 142


>gi|54295320|ref|YP_127735.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens]
 gi|53755152|emb|CAH16645.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens]
          Length = 577

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 150/367 (40%), Gaps = 29/367 (7%)

Query: 20  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 76
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAR 66

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILH 185

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           L+ N  +   +  +K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLSEAEQAFQKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPDNLEYL---YNSGVAQMALGHLNEA 296

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALAINPDDV-----VSRHML 351

Query: 377 SSDTGAA 383
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|166368636|ref|YP_001660909.1| glycosyl transferase family protein [Microcystis aeruginosa
           NIES-843]
 gi|166091009|dbj|BAG05717.1| probable glycosyl transferase [Microcystis aeruginosa NIES-843]
          Length = 562

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 134/297 (45%), Gaps = 27/297 (9%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G  LLA GE E A SA++ VL    ++  A +  A V  ++ RYS++L+ Y  A  V+ 
Sbjct: 44  QGDQLLAAGEKESALSAYRTVLSFHENSAQAHIKIAQVLQSQKRYSEALQAYNHAFIVND 103

Query: 149 SCPGAIR-----LGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQ-ANE 201
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ  +E
Sbjct: 104 KPPMEPSQRNYLVALGDIFAQEEKWSEALDAYQKAMIIKPTFKAQFQLGKALYSLQRWDE 163

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 257
           AA      + +Q A  + P    A       +F+ G+ +  +QL   A           P
Sbjct: 164 AA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALELIP 210

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
           ++  +Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G    A+
Sbjct: 211 SQGETYKKLGETLAKQGKWQEAEQIYRQALIYTPKDGDI---YNYLGKALAEQGKLGEAM 267

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             F++  +I P N E  + L +IY+  GQI++     R+A +IDP  ++    L E+
Sbjct: 268 AVFQQARQISPKNAEIYENLCYIYINSGQIDEGLNWCRQAVEIDPNLSEVRFILQEI 324


>gi|333998662|ref|YP_004531274.1| hypothetical protein TREPR_1725 [Treponema primitia ZAS-2]
 gi|333739778|gb|AEF85268.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
          Length = 385

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 139/356 (39%), Gaps = 61/356 (17%)

Query: 79  DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           ++ E S    KG   L +  +  A  +F  +L  D +N  AL+G       RG + D++E
Sbjct: 29  EVSEISELSKKGYQFLKENRIADAIDSFGKILMVDENNNYALVGMGDATRKRGSFHDAVE 88

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA----- 193
           +Y+R L  HP    A+  G+  C   L Q  KA + +++ L  D +N+  L  +A     
Sbjct: 89  YYRRCLAHHPGKNYAL-FGLADCYKALNQYHKAIEIWEQYLLHDDKNITVLTRVADAYRK 147

Query: 194 VMDLQANEAAGIRK-GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
           V D + ++   +R   ME+        PY  + L +L  H+ F                 
Sbjct: 148 VRDFKHSKEVYLRVLDMEEHN------PYAIIGLGHL--HYDFK---------------- 183

Query: 253 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 312
                                 +Y  A L+Y   + E NK    I     +G    KL  
Sbjct: 184 ----------------------EYRDA-LFYWEKMVEYNKEGVDIRVLTSIGNCHRKLKT 220

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           F S +  FEK +   P N   L  L   Y  L Q  ++ +   +  + DPR+       G
Sbjct: 221 FESGIPYFEKAMHRDPGNFYALFGLADCYRGLNQQYRSLDYWNRILEQDPRNKVILTRAG 280

Query: 373 ELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
           +   + +D   A+D ++ A  +      E     +  + V+   +G++E + +S +
Sbjct: 281 DAYRNLNDFEKAVDYYRRALNI------EFDTYAVLGLSVVSKAQGKYEESIESLR 330


>gi|425451529|ref|ZP_18831350.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
 gi|389767119|emb|CCI07396.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
          Length = 707

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 154/338 (45%), Gaps = 31/338 (9%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P       LG G  
Sbjct: 351 ALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLGRGEA 410

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM----QRAFE 217
             KL +  +A ++F+R L L+P   +A    A + L+  + +  +K ++K+    Q   +
Sbjct: 411 LDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAK 470

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKSHSYYNLARSYHSK 273
           I+     +L  L +   + G     +Q    ALA+ +        K +S Y L +  ++ 
Sbjct: 471 IWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKGNSLYQLNKINNAL 523

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
             Y KAG +          P +F   YY  G +  KLG    AL  F +  +   +  + 
Sbjct: 524 ESYSKAGQF---------NP-QFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQA 573

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 392
               G +  QL + ++A     KA +I  R ++ FI +G       D   A+ A++ A  
Sbjct: 574 WLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAWYRLGDYSQAITAYQQAIQ 633

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 634 RQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 666



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 69/325 (21%), Positives = 132/325 (40%), Gaps = 50/325 (15%)

Query: 35  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 94
           YE+   +N    +  +LG+ E   +  +    L +  + +   ++      W GK  + L
Sbjct: 389 YEKAIQINPDSAWQAWLGRGEALDKLDKNQEALES--FERVLSLNPAASQAWQGKADIYL 446

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
              +   A  A   +L   +++      +     N   Y  +++ Y +AL +  S    I
Sbjct: 447 ELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIE-SDNALI 505

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
               G   Y+L ++  A +++ +A Q +P+  +A  +  ++             ++K+ R
Sbjct: 506 WYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGII-------------LQKLGR 552

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             E       A    +N++    Q +L            N G       + L R   +  
Sbjct: 553 NSEALEAFTQATKANSNYY----QAWL------------NQGAL----LHQLERFQEAIA 592

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
            YEKA        + I+     +F   G+G    +LGD+  A+T +++ ++   DN ET 
Sbjct: 593 SYEKA--------RRISSRKSEVF--IGIGNAWYRLGDYSQAITAYQQAIQRQKDNPETW 642

Query: 335 KALGHIYVQLGQIEKA----QELLR 355
           K+LG+ + +LGQ E+A    QE LR
Sbjct: 643 KSLGNSWFKLGQYERAIQAYQESLR 667


>gi|425443888|ref|ZP_18823951.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9443]
 gi|389733311|emb|CCI02909.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9443]
          Length = 562

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 27/300 (9%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   
Sbjct: 41  YLWQGDQLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALKAYNRGFI 100

Query: 146 VHPSCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQ- 198
           V+   P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+   Q 
Sbjct: 101 VNDKPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAIIIKPTFKAQFQLGKALYSSQR 160

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-- 256
            +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A         
Sbjct: 161 WDEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALE 207

Query: 257 --PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P +  +Y  L  +   +G +E+A   Y  ++    K  +    Y  LG+   + G   
Sbjct: 208 LIPNQGETYKKLGETLAKQGKWEEAEQIYRQALIYAPKDGDI---YNYLGEALAEQGKLG 264

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+  F++  +I P N    + L + Y+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 265 EAMAVFQQARQISPKNANIYENLCYTYIDSGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|345303567|ref|YP_004825469.1| hypothetical protein Rhom172_1716 [Rhodothermus marinus
           SG0.5JP17-172]
 gi|345112800|gb|AEN73632.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus SG0.5JP17-172]
          Length = 402

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 159/380 (41%), Gaps = 39/380 (10%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
           ++ +Q  +   F  A    + A+R D  EP+ +  +G+L     + ++A +A++ VL+ D
Sbjct: 41  LQAEQALQRYDFAQALALADSAARYDPDEPAIYFLQGRLYAEMAQFDRAEAAYQEVLQRD 100

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
            +        A ++  + R+ +++  Y++ LQ +P  P      +     +LG +  A  
Sbjct: 101 PNFRGIWHNLANLKARQHRFREAIALYQKELQRYPGAP--TWQAMARAYRELGVVDSAAY 158

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
           A+++ALQLD   V A + +  +    ++     + +   QRA  + P      NYL    
Sbjct: 159 AYRQALQLDSTYVPAYIGMTQL---LDDEGRFAEALTYAQRAQALDPENPET-NYLLGEL 214

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK--AGLYYMASVKEIN 291
                 F  E L      V    P  + ++Y+L ++    G  E+  A L     ++E+N
Sbjct: 215 LMKNGRF-AEALPYLQRVVAAW-PWHASAHYSLGQALLRVGRREEGEAALQRYEQLRELN 272

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
                        QVQ+            E+ +   PDN     ALG    + G+ E+A 
Sbjct: 273 ------------AQVQM-----------MEEAVRTTPDNPYAFAALGAALRRSGRYEEAL 309

Query: 352 ELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 410
                A  + P + +   +L  L  +  DT AA+  ++ A        +   I+   N+G
Sbjct: 310 RAYTIALFLSPDNPEILNNLAALYFVQGDTLAAMQTYRRALQ-----ADSTFIDAWLNLG 364

Query: 411 VIHFEKGEFESAHQSFKDAL 430
           V+H  +GE  +A  +++  L
Sbjct: 365 VLHALRGERAAAAYAWRQVL 384



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 123/301 (40%), Gaps = 41/301 (13%)

Query: 410 GVIHFEKGEFESAHQSFKDALGD-----GIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 464
           G ++ E  +F+ A  ++++ L       GIW  L + K + +    + ++ Q K++Q   
Sbjct: 77  GRLYAEMAQFDRAEAAYQEVLQRDPNFRGIWHNLANLKARQHRFREAIALYQ-KELQ--- 132

Query: 465 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
           R+          W        +AR   ++    +A+  YR  L     YV AY+ +  + 
Sbjct: 133 RYPGAPT-----WQA------MARAYRELGVVDSAAYAYRQALQLDSTYVPAYIGMTQLL 181

Query: 525 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 584
                   ++     A  ++ + P    +LG+L +KN  + +A    +    A     S 
Sbjct: 182 DDEGRFAEALTYAQRAQALDPENPETNYLLGELLMKNGRFAEALPYLQRVVAAWPWHAS- 240

Query: 585 ATLSLGNWNYFAALRNEKRAPKLEATH-LEKAKELYTRV------IVQHTSNLYAANGAG 637
           A  SLG     A LR  +R     A    E+ +EL  +V      +     N YA    G
Sbjct: 241 AHYSLGQ----ALLRVGRREEGEAALQRYEQLRELNAQVQMMEEAVRTTPDNPYAFAALG 296

Query: 638 VVLAEKGQFDVSKDLFTQVQEAASGSVFVQM--PDVWINLAHVYFAQGNFALAMKMYQNC 695
             L   G+++ +   +T        ++F+    P++  NLA +YF QG+   AM+ Y+  
Sbjct: 297 AALRRSGRYEEALRAYTI-------ALFLSPDNPEILNNLAALYFVQGDTLAAMQTYRRA 349

Query: 696 L 696
           L
Sbjct: 350 L 350



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 12/200 (6%)

Query: 238 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
           Q +   Q    A +   + P +   Y+   R Y     +++A   Y    + + +   F 
Sbjct: 48  QRYDFAQALALADSAARYDPDEPAIYFLQGRLYAEMAQFDRAEAAYQ---EVLQRDPNFR 104

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             ++ L  ++ +   FR A+  ++K L+ YP    T +A+   Y +LG ++ A    R+A
Sbjct: 105 GIWHNLANLKARQHRFREAIALYQKELQRYP-GAPTWQAMARAYRELGVVDSAAYAYRQA 163

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN--IGVIHFE 415
            ++D     A+I + +LL   D G     F  A T  ++A    P     N  +G +  +
Sbjct: 164 LQLDSTYVPAYIGMTQLL--DDEG----RFAEALTYAQRAQALDPENPETNYLLGELLMK 217

Query: 416 KGEFESAHQSFKDALGDGIW 435
            G F  A    +  +    W
Sbjct: 218 NGRFAEALPYLQRVVAAWPW 237


>gi|330827422|ref|XP_003291797.1| hypothetical protein DICPUDRAFT_39606 [Dictyostelium purpureum]
 gi|325077989|gb|EGC31666.1| hypothetical protein DICPUDRAFT_39606 [Dictyostelium purpureum]
          Length = 717

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 44/275 (16%)

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +G+  Y+ G    A ++++RAL+L+P   EAL  + V+     E   I   +E  QRA +
Sbjct: 46  MGVTFYENGDSKMALESYKRALELNPIYPEALCNVGVIYKNLGE---ILPAIEYYQRALQ 102

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
             P      NYL               L +  LA+         +Y +L      KGD  
Sbjct: 103 FNP------NYL---------------LVKNNLAI---------AYNDLGTQTKMKGDLV 132

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           ++  YY  S+   +K  E    YY LG +  +      A+ N+E  +    +  E L  L
Sbjct: 133 QSKRYYKKSLFYNSKHAE---TYYNLGVLNSEQRKIEKAIVNYELAIHFNSNYTEALNNL 189

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 397
           G IY  L  IE++    + A K +P+ +Q+  +L   +I +  G      K A+  +K A
Sbjct: 190 GVIYKDLDNIEQSIHYYQMALKSNPKFSQSLNNLA--VIFTMQG----KMKEAKQQIKLA 243

Query: 398 GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +E P   E  NN+GVI+ + G+ + + +S++  +
Sbjct: 244 VKECPSYAEAYNNLGVIYRDIGKMDHSIKSYEACI 278


>gi|326430815|gb|EGD76385.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 809

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 34/246 (13%)

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYH 271
           E +P  A   N L   +   G +    +  E ALA+         P+ + +Y NL  +Y+
Sbjct: 348 EKHPSTATTYNGLGTAYGDKGDYDRAIECFEKALAIYVEMLGEKHPSTASTYNNLGSAYY 407

Query: 272 SKGDYEKAGLYY----MASVKEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI 326
           SKGDY+KA  +Y      +V+ + + H      Y GLG       +   A+  +EK L I
Sbjct: 408 SKGDYDKAIAFYEKDLAITVETLGEKHPGTADSYLGLGVAYYSKSENDEAIQLYEKALAI 467

Query: 327 --------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFID 370
                   +P   ET   LG+ Y   G+ +KA +L  KA  I         P  A  + +
Sbjct: 468 KVETLGEKHPSTAETYNNLGNTYYSKGEYDKAIQLYEKALAITVETLGEKHPSTADTYNN 527

Query: 371 LGELLISSDTG---AALDAFKTARTL-LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 424
           LG     SD G    A+  ++ A  + ++  GE+ P      NN+G  + +KG+++ A Q
Sbjct: 528 LGNAY--SDKGEYDKAIVFYEKALAIKVETLGEKHPSTASTHNNLGTAYADKGDYDKAIQ 585

Query: 425 SFKDAL 430
             + AL
Sbjct: 586 HHETAL 591



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 25/193 (12%)

Query: 263 YYNLARSYHSKGDYEKAGLYY----MASVKEINKPHEFIFPYY-GLGQVQLKLGDFRSAL 317
           Y NL  +Y  KG+ +KA  +Y      +V+ + + H      Y GLG      GD+  A+
Sbjct: 315 YNNLGEAYRHKGECDKAVAFYEKDLAITVETLGEKHPSTATTYNGLGTAYGDKGDYDRAI 374

Query: 318 TNFEKVLEIY--------PDNCETLKALGHIYVQLGQIEKAQELLRKAAKID-------- 361
             FEK L IY        P    T   LG  Y   G  +KA     K   I         
Sbjct: 375 ECFEKALAIYVEMLGEKHPSTASTYNNLGSAYYSKGDYDKAIAFYEKDLAITVETLGEKH 434

Query: 362 PRDAQAFIDLGELLIS-SDTGAALDAFKTARTL-LKKAGEEVP--IEVLNNIGVIHFEKG 417
           P  A +++ LG    S S+   A+  ++ A  + ++  GE+ P   E  NN+G  ++ KG
Sbjct: 435 PGTADSYLGLGVAYYSKSENDEAIQLYEKALAIKVETLGEKHPSTAETYNNLGNTYYSKG 494

Query: 418 EFESAHQSFKDAL 430
           E++ A Q ++ AL
Sbjct: 495 EYDKAIQLYEKAL 507



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 149/372 (40%), Gaps = 74/372 (19%)

Query: 101 QASSAFKIVLEADR-DNVPAL---LGQACVEFNRGRYSDSLEFYKRALQV--------HP 148
           +A+ A ++  E ++ +NV AL   LG+A    ++G    ++ FY++ L +        HP
Sbjct: 294 EAALAIRLRTEGEKGENVAALYNNLGEAYR--HKGECDKAVAFYEKDLAITVETLGEKHP 351

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
           S       G+G      G   +A + F++AL +    VE L                   
Sbjct: 352 STATTYN-GLGTAYGDKGDYDRAIECFEKALAI---YVEML------------------- 388

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT-----NHGPTKSHSY 263
                   E +P  A   N L + ++  G +       E  LA+T        P  + SY
Sbjct: 389 -------GEKHPSTASTYNNLGSAYYSKGDYDKAIAFYEKDLAITVETLGEKHPGTADSY 441

Query: 264 YNLARSYHSKGDYEKA-GLYYMA---SVKEINKPHEFIF-PYYGLGQVQLKLGDFRSALT 318
             L  +Y+SK + ++A  LY  A    V+ + + H      Y  LG      G++  A+ 
Sbjct: 442 LGLGVAYYSKSENDEAIQLYEKALAIKVETLGEKHPSTAETYNNLGNTYYSKGEYDKAIQ 501

Query: 319 NFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------P 362
            +EK L I        +P   +T   LG+ Y   G+ +KA     KA  I         P
Sbjct: 502 LYEKALAITVETLGEKHPSTADTYNNLGNAYSDKGEYDKAIVFYEKALAIKVETLGEKHP 561

Query: 363 RDAQAFIDLGELLIS-SDTGAALDAFKTARTL-LKKAGEEVPIEVLN--NIGVIHFEKGE 418
             A    +LG       D   A+   +TA  + ++  GE+ P    +  NIG++H ++G+
Sbjct: 562 STASTHNNLGTAYADKGDYDKAIQHHETALAIRVETLGEKHPHTATSYFNIGLLHDDRGD 621

Query: 419 FESAHQSFKDAL 430
            E A    + AL
Sbjct: 622 KEQACACMQQAL 633


>gi|443324671|ref|ZP_21053408.1| capsular polysaccharide biosynthesis protein [Xenococcus sp. PCC
           7305]
 gi|442795712|gb|ELS05062.1| capsular polysaccharide biosynthesis protein [Xenococcus sp. PCC
           7305]
          Length = 903

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           PT +  YYNLA  +H  GD+E+    Y  +VK  +KP+ +   Y+ LG +    G +  A
Sbjct: 102 PTWAEIYYNLAVIWHEVGDWEQTITAYQQAVK--HKPN-YTAAYFNLGLLYDNRGQWNEA 158

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL- 375
           + N+++ +E+ P N      LG    +  + E A E+L++  KIDP  A    +LG++L 
Sbjct: 159 VANYQRAIELQPYNIRAYSNLGSTLARHQKYESAIEVLQQGLKIDPTWATLHNNLGQVLW 218

Query: 376 ISSDTGAALDAFKTARTL 393
           +      AL +F+ A +L
Sbjct: 219 LEGRLDQALVSFELALSL 236



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 26/193 (13%)

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG---- 311
            P +   Y  LA++Y ++GD++KA   Y  S+   N+P +         Q+  +LG    
Sbjct: 33  NPEQQEVYPLLAKAYANQGDFDKAITAYHISLG--NQPEQ--------AQICAELGLLYS 82

Query: 312 ---DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
               F  A++N++K + + P   E    L  I+ ++G  E+     ++A K  P    A+
Sbjct: 83  KQKKFTQAISNYQKAIALKPTWAEIYYNLAVIWHEVGDWEQTITAYQQAVKHKPNYTAAY 142

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 426
            +LG  L+  + G     +  A    ++A E  P  I   +N+G       ++ESA +  
Sbjct: 143 FNLG--LLYDNRG----QWNEAVANYQRAIELQPYNIRAYSNLGSTLARHQKYESAIEVL 196

Query: 427 KDALG-DGIWLTL 438
           +  L  D  W TL
Sbjct: 197 QQGLKIDPTWATL 209


>gi|425465206|ref|ZP_18844516.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9809]
 gi|389832591|emb|CCI23651.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9809]
          Length = 562

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 27/297 (9%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G  LLA GE E A SA++ VL    ++  A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDQLLAAGEKESALSAYRTVLSFHENSAQAHIKIAQVLQSQKRYSEALQAYDRGFIVNH 103

Query: 149 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQ-ANE 201
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ  +E
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAMIIKPTFKAQFQLGKALYSLQRWDE 163

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 257
           AA      + +Q A  + P    A       +F+ G+ +  +QL + A           P
Sbjct: 164 AA------KALQAAVFLDPTQGKA-------YFYLGKAYSEQQLWQEASYAYQQALELIP 210

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
           ++  +Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G    A+
Sbjct: 211 SQGETYKKLGETLAKQGKWQEAEQIYRQALIYTPKDGDI---YNYLGKALAEQGKLGEAM 267

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
             F++  +I P N    + L +IY+  GQI++     R+A +IDP  ++    L E+
Sbjct: 268 AVFQQARQISPKNANIYENLCYIYINSGQIDEGLNWCRQAVEIDPNLSEVRFILQEI 324


>gi|365987265|ref|XP_003670464.1| hypothetical protein NDAI_0E04040 [Naumovozyma dairenensis CBS 421]
 gi|343769234|emb|CCD25221.1| hypothetical protein NDAI_0E04040 [Naumovozyma dairenensis CBS 421]
          Length = 783

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 145/362 (40%), Gaps = 41/362 (11%)

Query: 107 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEF--------YKRALQVHPSCPGAIRLGI 158
           K++LE+D  N      Q     N   YS +L          YK    ++   P  IR  +
Sbjct: 437 KLLLESDNPNGNMFDAQNDEPLNNLLYSFALILKTSSQYNSYKAIRLINSLLPTHIRDEM 496

Query: 159 GLCRYKLGQLG-------KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
             C+ +LG L         + + F++  +L P  ++ L   + +    ++   +     +
Sbjct: 497 PWCQSQLGMLHFEIVNYEMSLKYFEKLRKLQPTRLKDLETYSTLLWHLHDKIKLTVLSNE 556

Query: 212 MQRAFEIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           + + F+  P  +C      L N F     H   ++  +    VT   PT ++ Y   A  
Sbjct: 557 LLKEFKNEPQTWCC-----LGNLFSLQKDH---KEAIKAFEKVTKLDPTFTYGYTLQAHE 608

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
           Y S   ++ A  Y+  +V   ++ +     YYG+G   +KLG+F  AL  FEK   I P 
Sbjct: 609 YLSDDSFDLAKNYFRKAVSTDSQHYN---AYYGIGMCSMKLGEFEHALLYFEKARSINPS 665

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFK 388
           N   +   G  + +L   EKA      A ++ P  + A      LL S ++   AL+ F+
Sbjct: 666 NVILICCCGVAFEKLSYPEKALSYYELACQVQPSSSLAKFKRAHLLYSMANYPLALECFE 725

Query: 389 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI 448
               L K A EE           +HF  G+  +     KDA+ +      LD K    ++
Sbjct: 726 ---ELTKLAPEE---------ATVHFILGQLYNIMGRKKDAVKEYTIAMNLDPKGNQVIL 773

Query: 449 DA 450
           +A
Sbjct: 774 EA 775



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 1/114 (0%)

Query: 81  HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 140
           +EP TW   G L   + + ++A  AF+ V + D         QA    +   +  +  ++
Sbjct: 563 NEPQTWCCLGNLFSLQKDHKEAIKAFEKVTKLDPTFTYGYTLQAHEYLSDDSFDLAKNYF 622

Query: 141 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
           ++A+        A   GIG+C  KLG+   A   F++A  ++P NV  +    V
Sbjct: 623 RKAVSTDSQHYNAY-YGIGMCSMKLGEFEHALLYFEKARSINPSNVILICCCGV 675


>gi|326435668|gb|EGD81238.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 863

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 102/379 (26%)

Query: 90  GQLLLAKGEVEQASSAFK----IVLEADRDNVPAL------LGQACVEFNRGRYSDSLEF 139
           G    +KGE ++A + ++    I +E   +  P+       LG A   +++G +  ++ +
Sbjct: 320 GNAYCSKGEYDRAIAFYEKDLAITVETLGEKHPSTASTYNNLGTA--YYSKGDFDKAIHY 377

Query: 140 YKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           YK+AL +        HPS   +  +G+G+   K G+L +A   +++AL +    VEAL  
Sbjct: 378 YKKALAITVETLGEKHPSTADSC-VGLGIAYEKKGELDRAIAFYEQALAI---MVEAL-- 431

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
                                    E +P  A   N + + ++  G +    +  + ALA
Sbjct: 432 ------------------------GEKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALA 467

Query: 252 V-----TNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMA---SVKEINKPHEFIFPYYG 302
           V         P+ + +Y NL  +YH KGDY+KA  LY  A   +V+ + + H      Y 
Sbjct: 468 VRVETLGEKHPSTAQTYNNLGGAYHDKGDYDKAIALYEKALAITVEALGEKHPSTATSYN 527

Query: 303 -LGQVQLKLGDFRSALTNFEKVLEIY--------PDNCETLKALGHIYVQLGQIEKAQEL 353
            LG    + G++  A+  +EK L IY        P   +T   LG  YV  GQ  KA   
Sbjct: 528 NLGGAYARKGEYDKAIACYEKALAIYAETLGEKHPSTADTYNNLGAAYVDKGQYGKAIHH 587

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGV 411
             +A  I                                 ++  GE+ P   +   NIG+
Sbjct: 588 YEQALAIK--------------------------------VETLGEKHPSTAMTYFNIGL 615

Query: 412 IHFEKGEFESAHQSFKDAL 430
           +H  +G+ E A    + AL
Sbjct: 616 LHDTRGDKEQACAYVQQAL 634



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 30/238 (12%)

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVT-----NHGPTKSHSYYNLARSYHSKGDYE 277
           A++ N L N +   G++       E  LA+T        P+ + +Y NL  +Y+SKGD++
Sbjct: 313 AVSNNNLGNAYCSKGEYDRAIAFYEKDLAITVETLGEKHPSTASTYNNLGTAYYSKGDFD 372

Query: 278 KAGLYY----MASVKEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI------ 326
           KA  YY      +V+ + + H        GLG    K G+   A+  +E+ L I      
Sbjct: 373 KAIHYYKKALAITVETLGEKHPSTADSCVGLGIAYEKKGELDRAIAFYEQALAIMVEALG 432

Query: 327 --YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLI 376
             +P+  +T   +G +Y   G  ++A E   KA  +         P  AQ + +LG    
Sbjct: 433 EKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALAVRVETLGEKHPSTAQTYNNLGGAYH 492

Query: 377 -SSDTGAALDAFKTARTLLKKA-GEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 430
              D   A+  ++ A  +  +A GE+ P      NN+G  +  KGE++ A   ++ AL
Sbjct: 493 DKGDYDKAIALYEKALAITVEALGEKHPSTATSYNNLGGAYARKGEYDKAIACYEKAL 550



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 30/224 (13%)

Query: 237 GQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASV 287
           G+H       ETALAV        G   + S  NL  +Y SKG+Y++A  +Y      +V
Sbjct: 285 GEHDKAIAYYETALAVYLRTEKEKGENVAVSNNNLGNAYCSKGEYDRAIAFYEKDLAITV 344

Query: 288 KEINKPHEFIFPYY-GLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALG 338
           + + + H      Y  LG      GDF  A+  ++K L I        +P   ++   LG
Sbjct: 345 ETLGEKHPSTASTYNNLGTAYYSKGDFDKAIHYYKKALAITVETLGEKHPSTADSCVGLG 404

Query: 339 HIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLIS-SDTGAALDAFKT 389
             Y + G++++A     +A  I         P  A  + ++G +  S  D   A++ F  
Sbjct: 405 IAYEKKGELDRAIAFYEQALAIMVEALGEKHPNTADTYNNIGSVYYSKGDYDRAIECFDK 464

Query: 390 ARTL-LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A  + ++  GE+ P   +  NN+G  + +KG+++ A   ++ AL
Sbjct: 465 ALAVRVETLGEKHPSTAQTYNNLGGAYHDKGDYDKAIALYEKAL 508



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 120/311 (38%), Gaps = 69/311 (22%)

Query: 65  FILATQYYNKASRIDMH-----EPST---WVGKGQLLLAKGEVEQASS----AFKIVLEA 112
           F  A  YY KA  I +       PST    VG G     KGE+++A +    A  I++EA
Sbjct: 371 FDKAIHYYKKALAITVETLGEKHPSTADSCVGLGIAYEKKGELDRAIAFYEQALAIMVEA 430

Query: 113 DRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGL 160
             +  P           V +++G Y  ++E + +AL V        HPS        +G 
Sbjct: 431 LGEKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALAVRVETLGEKHPSTAQTYN-NLGG 489

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
             +  G   KA   +++AL +    VEAL                           E +P
Sbjct: 490 AYHDKGDYDKAIALYEKALAI---TVEAL--------------------------GEKHP 520

Query: 221 YCAMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGD 275
             A + N L   +   G++       E ALA+         P+ + +Y NL  +Y  KG 
Sbjct: 521 STATSYNNLGGAYARKGEYDKAIACYEKALAIYAETLGEKHPSTADTYNNLGAAYVDKGQ 580

Query: 276 YEKAGLYY----MASVKEINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEIY--- 327
           Y KA  +Y       V+ + + H      Y+ +G +    GD   A    ++ L+++   
Sbjct: 581 YGKAIHHYEQALAIKVETLGEKHPSTAMTYFNIGLLHDTRGDKEQACAYVQQALDVFATT 640

Query: 328 --PDNCETLKA 336
             PD+  T KA
Sbjct: 641 LGPDHPNTRKA 651


>gi|386347101|ref|YP_006045350.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
 gi|339412068|gb|AEJ61633.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 365

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 15/287 (5%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G  LL +   E+A   F+ +LE DR N  AL+G       +G +  ++ +Y+  L+ +P
Sbjct: 19  EGYALLKQDRPEEAIIRFEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYP 78

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
               A+  G+  C     +  +A + +++ L+ D  NV  L  +A       +    ++ 
Sbjct: 79  GNNYAL-FGLADCYKAQERYREAIEIWEKYLKYDETNVTVLTRVADA---YRKTGNFKRS 134

Query: 209 MEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
            E   +  E+    PY  + L +L  H+ F      +      A+   +           
Sbjct: 135 KELYLKVLELDEGNPYALIGLGHL--HYDFKDYRTAISYWE--AILERDRDRVDIRVLTA 190

Query: 266 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
           +   +     YE+   Y++ ++++   PH F +  +GL      +GD R +L  +E++LE
Sbjct: 191 IGNCHRKLKQYERGIPYFLKALEK--DPHNF-YALFGLADCYRGVGDHRRSLQYWERILE 247

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             P N   L   G  Y  LG + +A+E   +A  I+  D+ A + L 
Sbjct: 248 KDPHNKVILTRTGDAYRHLGDLARAEEYYHQALNIEF-DSYAILGLA 293



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 124/322 (38%), Gaps = 49/322 (15%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           + K   +D H     VG G     KGE ++A S ++  L     N  AL G A     + 
Sbjct: 36  FEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYPGNNYALFGLADCYKAQE 95

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           RY +++E +++ L+   +    +       R K G   ++++ + + L+LD  N  AL+ 
Sbjct: 96  RYREAIEIWEKYLKYDETNVTVLTRVADAYR-KTGNFKRSKELYLKVLELDEGNPYALIG 154

Query: 192 LAVM-------------------------DLQANEAAG--------IRKGMEKMQRAFEI 218
           L  +                         D++   A G          +G+    +A E 
Sbjct: 155 LGHLHYDFKDYRTAISYWEAILERDRDRVDIRVLTAIGNCHRKLKQYERGIPYFLKALEK 214

Query: 219 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS---YHSKGD 275
            P+   AL  LA+ +   G H    Q  E  L    H          L R+   Y   GD
Sbjct: 215 DPHNFYALFGLADCYRGVGDHRRSLQYWERILEKDPHNKVI------LTRTGDAYRHLGD 268

Query: 276 YEKAGLYYMASVKEINKPHEF-IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
             +A  YY  ++       EF  +   GL  V     ++R A  +   +L + P+N +  
Sbjct: 269 LARAEEYYHQALNI-----EFDSYAILGLAMVHKARKEYREAAESLNTILRLDPENPKIY 323

Query: 335 KALGHIYVQLGQIEKAQELLRK 356
             L   Y+ L Q E+A+ +L++
Sbjct: 324 IELADCYLHLNQKEEARSVLKE 345



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K  +F  + + Y K   +D   P   +G G L     +   A S ++ +LE DRD V   
Sbjct: 127 KTGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILERDRDRVDIR 186

Query: 121 LGQACVEFNR--GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
           +  A    +R   +Y   + ++ +AL+  P    A+  G+  C   +G   ++ Q ++R 
Sbjct: 187 VLTAIGNCHRKLKQYERGIPYFLKALEKDPHNFYAL-FGLADCYRGVGDHRRSLQYWERI 245

Query: 179 LQLDPEN 185
           L+ DP N
Sbjct: 246 LEKDPHN 252


>gi|427421824|ref|ZP_18912007.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 7375]
 gi|425757701|gb|EKU98555.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 7375]
          Length = 393

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 10/305 (3%)

Query: 56  TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD 115
            +Q    E++  A   Y +A  ID +    + G G L + KG+ + A  +++  ++ D  
Sbjct: 76  AQQNVDNENYSAAIAAYQEALAIDRNNARLYSGIGYLQILKGDYQLAVESYRQAIDRDSR 135

Query: 116 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           NV    G A   +   RY+++ + Y+   ++ PS   A  LG+G    +  +   A  A 
Sbjct: 136 NVSFRYGLAHGLYQAERYAEAADAYRTITRMAPSEANAY-LGLGNMLLRQNEYDLALNAL 194

Query: 176 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
           + A +L P N +   A+ ++ LQ          +E +QRA  I          LA  + +
Sbjct: 195 EEAARLAPNNAQVYEAIGLLYLQQER---FEDALEPLQRALRIDSNRGSIHGNLAKIWIY 251

Query: 236 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 295
            G+    E+    A++     P    S+Y LA     +GD   A +++  +V E N    
Sbjct: 252 QGRERQAEESLRRAISAN---PRDWESHYQLALIMQERGDNAAAFIHFEETV-EANP--S 305

Query: 296 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 355
           F+      G + L+   +  A+ ++ +++  +P++      LG      G+ E A + L+
Sbjct: 306 FVPAQAEFGSMLLEREQYIRAVISYRQIVRQFPEDAGARYNLGLALWGQGRREAAVDSLQ 365

Query: 356 KAAKI 360
           KA ++
Sbjct: 366 KARRL 370



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 42/77 (54%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y GLG + L+  ++  AL   E+   + P+N +  +A+G +Y+Q  + E A E L++A +
Sbjct: 174 YLGLGNMLLRQNEYDLALNALEEAARLAPNNAQVYEAIGLLYLQQERFEDALEPLQRALR 233

Query: 360 IDPRDAQAFIDLGELLI 376
           ID        +L ++ I
Sbjct: 234 IDSNRGSIHGNLAKIWI 250


>gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
 gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
 gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
 gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
 gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
          Length = 125

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 3/108 (2%)

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           NL  +Y+ +GDY+KA  YY  ++ E++  +   +  Y LG    K GD++ A+  ++K L
Sbjct: 14  NLGNAYYKQGDYQKAIEYYQKAL-ELDPNNASAW--YNLGNAYYKQGDYQKAIEYYQKAL 70

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           E+ P+N +     G+ Y + G  +KA E  +KA ++DP +A+A  +LG
Sbjct: 71  ELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLG 118



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            W   G     +G+ ++A   ++  LE D +N  A        + +G Y  ++E+Y++AL
Sbjct: 11  AWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKAL 70

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           ++ P+   A     G   YK G   KA + +Q+AL+LDP N +A
Sbjct: 71  ELDPNNAKAWYR-RGNAYYKQGDYQKAIEDYQKALELDPNNAKA 113



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 6/118 (5%)

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
            A A   L N ++  G +    +  + AL +    P  + ++YNL  +Y+ +GDY+KA  
Sbjct: 8   SAEAWKNLGNAYYKQGDYQKAIEYYQKALELD---PNNASAWYNLGNAYYKQGDYQKAIE 64

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
           YY  ++ E++  +   +  Y  G    K GD++ A+ +++K LE+ P+N +  + LG+
Sbjct: 65  YYQKAL-ELDPNNAKAW--YRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLGN 119



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K+  +  A +YY KA  +D +  S W   G     +G+ ++A   ++  LE D +N  A 
Sbjct: 21  KQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELDPNNAKAW 80

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
             +    + +G Y  ++E Y++AL++ P+   A +  +G  + K G
Sbjct: 81  YRRGNAYYKQGDYQKAIEDYQKALELDPNNAKA-KQNLGNAKQKQG 125



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 7/105 (6%)

Query: 328 PDN-CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALD 385
           P N  E  K LG+ Y + G  +KA E  +KA ++DP +A A+ +LG       D   A++
Sbjct: 5   PGNSAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIE 64

Query: 386 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            ++ A  L     +    +     G  ++++G+++ A + ++ AL
Sbjct: 65  YYQKALEL-----DPNNAKAWYRRGNAYYKQGDYQKAIEDYQKAL 104


>gi|254384605|ref|ZP_04999944.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343489|gb|EDX24455.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 1033

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 25/263 (9%)

Query: 122 GQACVEFNRGR-------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
           GQ+     RGR       Y  +L  Y+ AL + P    A   G G  R+  G+L +A   
Sbjct: 511 GQSLALTLRGRNHRNADAYPQALADYEHALALDPENERA-HFGRGRTRHLTGRLDEAIAD 569

Query: 175 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           + RA++L PE+   L  ++   L    A    + +    R+ E+      AL      F 
Sbjct: 570 YTRAVELAPED---LTNVSYRGLALQVAERYEEAIADFDRSLELRSDYEWALTSRGATFR 626

Query: 235 FTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
             G++       E ALA  N      P  + ++ +   +++S G YE+A   +  +++  
Sbjct: 627 LMGRY-------EEALADFNRAVDLDPGSAWAHASRGAAFNSMGRYEEALADFHRAIE-- 677

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
            KP ++ +P  G G V   LG    A+  F + + + PD    L   G+ Y  LG+ E+A
Sbjct: 678 LKP-DYDWPLAGRGDVYRSLGRHEEAVAEFTRAIALTPDYWWALAGCGYSYTSLGRHEEA 736

Query: 351 QELLRKAAKIDPRDAQAFIDLGE 373
             +  +A  + P D  AF   G+
Sbjct: 737 VAVFTRAIALAPDDRWAFAGRGD 759


>gi|186475487|ref|YP_001856957.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184191946|gb|ACC69911.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
          Length = 615

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 22/328 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G ++ A   ++  L+ D  +V AL     +   +G++ ++ +  +RA  + P    A++L
Sbjct: 15  GRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQD-AALQL 73

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK-GMEKMQRA 215
            +G     LG+L +A + F+ AL L P    A   L      A   AG  +  ++  Q++
Sbjct: 74  NLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLG----NAYALAGRHEDAVDAFQKS 129

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
             + P  A +   L N     G+H         AL +    P  + ++ N+  + ++ G 
Sbjct: 130 LRLQPMDASSHVNLGNALHALGRHREAADSFRRALELR---PGHAGAHNNMGMALNALGS 186

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
             +AG ++ A++K   +   F+   + L       G    A+T FE VL +       L 
Sbjct: 187 ATEAGAHFRAALKIEPR---FVAARFNLANTLDATGQHEQAVTEFEAVLAMQSSLPPALF 243

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG---ELLISSDTGAALDAFKTART 392
            LG+    LG+  +A+    +A  +DP  A A++ LG     L + D  AA+ AF  A  
Sbjct: 244 GLGNALASLGRHAEARPRFERAVGLDPAFALAWLSLGAAHHALGAHD--AAVRAFDQALR 301

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
           L      ++P+  +N  GV     G+F+
Sbjct: 302 LRP----DLPMAHMNR-GVALLTLGDFK 324



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
           A G+ EQA + F+ VL       PAL G      + GR++++   ++RA+ + P+   A 
Sbjct: 217 ATGQHEQAVTEFEAVLAMQSSLPPALFGLGNALASLGRHAEARPRFERAVGLDPAFALAW 276

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
            L +G   + LG    A +AF +AL+L P+
Sbjct: 277 -LSLGAAHHALGAHDAAVRAFDQALRLRPD 305



 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 126/314 (40%), Gaps = 29/314 (9%)

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS- 377
            +   L++ P + + L  LG +  Q GQ E+A +L+R+AA + P+DA   ++LG  L + 
Sbjct: 23  GYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAALQLNLGNALKAL 82

Query: 378 SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 437
                A++ F+ A TL        P+    N+G  +   G  E A  +F+ +L     L 
Sbjct: 83  GRLDQAIERFRNALTL----APTFPM-AHYNLGNAYALAGRHEDAVDAFQKSLR----LQ 133

Query: 438 LLDSKTKTYVIDASASMLQFKDMQLFHRFENDG--NHVELPWNKVTVLFNLARLLEQIHD 495
            +D+ +   + +A  ++ +       HR   D     +EL         N+   L  +  
Sbjct: 134 PMDASSHVNLGNALHALGR-------HREAADSFRRALELRPGHAGAHNNMGMALNALGS 186

Query: 496 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
              A   +R  L     +V A   LA    A    + ++      L +    P AL  LG
Sbjct: 187 ATEAGAHFRAALKIEPRFVAARFNLANTLDATGQHEQAVTEFEAVLAMQSSLPPALFGLG 246

Query: 556 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF-----AALRNEKRA----PK 606
           +         +A+  F  A    D   + A LSLG  ++      AA+R   +A    P 
Sbjct: 247 NALASLGRHAEARPRFERAV-GLDPAFALAWLSLGAAHHALGAHDAAVRAFDQALRLRPD 305

Query: 607 LEATHLEKAKELYT 620
           L   H+ +   L T
Sbjct: 306 LPMAHMNRGVALLT 319


>gi|116622726|ref|YP_824882.1| hypothetical protein Acid_3625 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 547

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 131/304 (43%), Gaps = 11/304 (3%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W      L   G  E A+ +F      +   + A LG       +     +L  + R L+
Sbjct: 99  WFNLAVCLERAGVWEDAAQSFHRAATLEPGYLDAHLGLGVCHLRQEDPKSALFSFDRCLE 158

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 205
           ++ S   A + G  +    LG    A Q +Q+ L+ +P++ ++L  L ++ +   +   +
Sbjct: 159 LNASHVDA-QFGKAVALQSLGHAEDASQIYQKILEKNPDSEDSLSNLILIGMAKEDFDMV 217

Query: 206 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
           R+  E +    E+ P   +AL  LA+     G+H L  +       + N  P     ++N
Sbjct: 218 REYSEHL---LELRPESTVALEGLASWACAAGEHALTAKFCTL---LVNSVPGHFEGWFN 271

Query: 266 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
           LA ++   G +E+A   Y   VK   +  E    +  LG V+ + GD   A +++E+ ++
Sbjct: 272 LALAHQKSGRFEQAAEAYSECVKLRPQSCE---SHTNLGIVREQTGDTAGARSSYERAIK 328

Query: 326 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAAL 384
             PD    L  L  +    GQ E+++   ++     P++ +A   +G L L   D   A 
Sbjct: 329 AGPDALAPLWNLALLLEHAGQFEESERYYKQVLDRAPKEEEARFRMGFLRLQREDYRGAA 388

Query: 385 DAFK 388
           +AF+
Sbjct: 389 EAFE 392


>gi|354502726|ref|XP_003513433.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit
           [Cricetulus griseus]
          Length = 1046

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P+ A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPKFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPKFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|190340092|gb|AAI63923.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Danio rerio]
          Length = 1046

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 195/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 354

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F    +             NLA +L+Q      A + Y+  +     +
Sbjct: 355 -------EVFPEFAAAHS-------------NLASVLQQQGKLQEALMHYKEAIRISPTF 394

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 395 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 454

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 455 ALKLKPDFPDAYCNLA 470


>gi|186682271|ref|YP_001865467.1| hypothetical protein Npun_R1867 [Nostoc punctiforme PCC 73102]
 gi|186464723|gb|ACC80524.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 409

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 22/345 (6%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G  L  +G+ + A  AF+  +E + + V A +  A    ++G+  +++  YK+A+ + P
Sbjct: 55  EGSNLYKQGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQGKPQEAIAHYKKAISLDP 114

Query: 149 SCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIR 206
              GA   LG+ L R  L QL  A   +++AL L+P   +A   L   +  Q      + 
Sbjct: 115 HDSGAYFNLGLTLAR--LNQLEPAIAQYKKALSLEPNYADAHYNLGNALYTQGK----LT 168

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
           + + +   A  + P  A     L N  +  G+  L E +T+   +++   P  + ++Y L
Sbjct: 169 EAVTEYTAAIRLKPSYAPTYTRLGNALYDRGE--LAEAVTQYKKSIS-FDPKYADAHYYL 225

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
             + +++G   +A   Y A+++   K       Y  LG      G    A+  +++ L +
Sbjct: 226 GNALYAQGKSAEAIAEYTAAIRLSPKNPA---GYNALGNTLYAQGKLEEAIAQYKQALNL 282

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 386
            P+  +    L   +   G++ +A     +A +IDP+ AQA+  L   +   D G   +A
Sbjct: 283 EPNYADAHYNLASAFYAQGKLTEAITDYTEAIRIDPKHAQAYTGLANAM--DDQGKPQEA 340

Query: 387 FKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFKDA 429
                   KKA   VP +     N+G+    + + E A  + K A
Sbjct: 341 IAH----YKKAISLVPNDAFTYYNLGITLGREQQLEEAIVNLKKA 381



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 141/300 (47%), Gaps = 24/300 (8%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQAC 125
           A  +Y KA  +D H+   +   G  L    ++E A + +K  + LE +  +    LG A 
Sbjct: 102 AIAHYKKAISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLEPNYADAHYNLGNAL 161

Query: 126 VEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
             + +G+ ++++  Y  A+++ PS  P   RLG  L  Y  G+L +A   +++++  DP+
Sbjct: 162 --YTQGKLTEAVTEYTAAIRLKPSYAPTYTRLGNAL--YDRGELAEAVTQYKKSISFDPK 217

Query: 185 NVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
             +A   L   +  Q   A  I     +   A  + P      N L N  +  G+  L E
Sbjct: 218 YADAHYYLGNALYAQGKSAEAI----AEYTAAIRLSPKNPAGYNALGNTLYAQGK--LEE 271

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            + +   A+ N  P  + ++YNLA +++++G   +A   Y  +++ I+  H     Y GL
Sbjct: 272 AIAQYKQAL-NLEPNYADAHYNLASAFYAQGKLTEAITDYTEAIR-IDPKHAQA--YTGL 327

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKAQELLRKAAKI 360
                  G  + A+ +++K + + P++  T   LG   + LG   Q+E+A   L+KA ++
Sbjct: 328 ANAMDDQGKPQEAIAHYKKAISLVPNDAFTYYNLG---ITLGREQQLEEAIVNLKKAKEL 384



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 102/276 (36%), Gaps = 55/276 (19%)

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFE 217
           G   YK G    A  AF++A++L+P  V+A +ALA  +D Q            K Q A  
Sbjct: 56  GSNLYKQGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQG-----------KPQEAIA 104

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
            Y   A++L+                             P  S +Y+NL  +       E
Sbjct: 105 HYK-KAISLD-----------------------------PHDSGAYFNLGLTLARLNQLE 134

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
            A   Y    K ++    +   +Y LG      G    A+T +   + + P    T   L
Sbjct: 135 PAIAQYK---KALSLEPNYADAHYNLGNALYTQGKLTEAVTEYTAAIRLKPSYAPTYTRL 191

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL--- 394
           G+     G++ +A    +K+   DP+ A A   LG  L +    A   A  TA   L   
Sbjct: 192 GNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNALYAQGKSAEAIAEYTAAIRLSPK 251

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             AG        N +G   + +G+ E A   +K AL
Sbjct: 252 NPAG-------YNALGNTLYAQGKLEEAIAQYKQAL 280


>gi|406982607|gb|EKE03902.1| TPR Domain containing protein [uncultured bacterium]
          Length = 666

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 10/248 (4%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
             KG  L    + ++A   +   LE + D+  AL G+A      G Y+ ++E Y++A+ V
Sbjct: 414 TAKGNELSINKQYDEALVLYNKALENNPDDFYALSGRANAFQKIGNYNTAIENYEKAI-V 472

Query: 147 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 206
             S    + L  G    K  +  +A+ A+++AL++DP +  A + +  +  +  E   + 
Sbjct: 473 QDSSNKDLFLAFGNSLMKSNKTTEAKGAYEKALEIDPASSSAYIGIGDVHYKNQE---LN 529

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 266
           K  +   +A ++      AL  L N +    +    +   E  L +    P   ++ YNL
Sbjct: 530 KATDAYNKALDLDRRNVGALIKLGNIYKEKNRLLEAQNYYERTLEI---DPANINAKYNL 586

Query: 267 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
           A      GD ++A  YY    + I    EF   YY L  V  K  D+++A+ N+E+ L +
Sbjct: 587 ALILVEFGDTKQAKTYYQ---QIIQSSPEFPEVYYALAIVNEKERDYKNAIANYEQYLTL 643

Query: 327 YPDNCETL 334
            P++  +L
Sbjct: 644 LPNDDSSL 651



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y KA  ID    S ++G G +     E+ +A+ A+   L+ DR NV AL+    +   + 
Sbjct: 501 YEKALEIDPASSSAYIGIGDVHYKNQELNKATDAYNKALDLDRRNVGALIKLGNIYKEKN 560

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           R  ++  +Y+R L++ P+   A +  + L   + G   +A+  +Q+ +Q  PE  E   A
Sbjct: 561 RLLEAQNYYERTLEIDPANINA-KYNLALILVEFGDTKQAKTYYQQIIQSSPEFPEVYYA 619

Query: 192 LAVMD 196
           LA+++
Sbjct: 620 LAIVN 624



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 4/135 (2%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  +  Y ++        DY+ A   YM +   ++    + + Y  +  ++   GD   A
Sbjct: 95  PDDAFIYISIGNILQENNDYDNALNAYMQA---LDIAPTYKYNYLNIAIIKNMKGDTDGA 151

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE-LL 375
           +  ++K L  YPD+ ET K L  IY+ L + EKA E       I+P + + + + G+ LL
Sbjct: 152 IDYYKKFLTYYPDHTETRKNLASIYLALNKPEKAIEEYEIILNINPNNFKEYANYGKALL 211

Query: 376 ISSDTGAALDAFKTA 390
           +      A+D  KTA
Sbjct: 212 LVKQYVKAIDVLKTA 226



 Score = 43.1 bits (100), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 22/236 (9%)

Query: 151 PGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
           P A+R     L  Y +  L  A++  Q A++L P   +AL+ + +  + + E    R+ +
Sbjct: 28  PTALRHYNNALTLYSIHDLQGAKEELQLAIKLSPG--DALIHIKLAGILS-EMGLWRESL 84

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           ++   A  + P  A     + N       +   +      +   +  PT  ++Y N+A  
Sbjct: 85  KEYTEAARLKPDDAFIYISIGNILQENNDY---DNALNAYMQALDIAPTYKYNYLNIAII 141

Query: 270 YHSKGD------YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            + KGD      Y K  L Y     E  K          L  + L L     A+  +E +
Sbjct: 142 KNMKGDTDGAIDYYKKFLTYYPDHTETRK---------NLASIYLALNKPEKAIEEYEII 192

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
           L I P+N +     G   + + Q  KA ++L+ A   +P DA+A  +L    I+++
Sbjct: 193 LNINPNNFKEYANYGKALLLVKQYVKAIDVLKTAIAKNPNDAEAHANLAIAYINTN 248



 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 12/160 (7%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y G+G V  K  +   A   + K L++   N   L  LG+IY +  ++ +AQ    +  +
Sbjct: 515 YIGIGDVHYKNQELNKATDAYNKALDLDRRNVGALIKLGNIYKEKNRLLEAQNYYERTLE 574

Query: 360 IDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
           IDP +  A  +L  +L+   DT  A    KT    + ++  E P EV   + +++ ++ +
Sbjct: 575 IDPANINAKYNLALILVEFGDTKQA----KTYYQQIIQSSPEFP-EVYYALAIVNEKERD 629

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
           +++A  +++       +LTLL +   +  +     M++ K
Sbjct: 630 YKNAIANYEQ------YLTLLPNDDSSLNVKIRLEMIKNK 663


>gi|341877597|gb|EGT33532.1| hypothetical protein CAEBREN_05677 [Caenorhabditis brenneri]
          Length = 407

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 23/247 (9%)

Query: 194 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH-FLVEQLTETALAV 252
           V  L A     + + ME  Q+A+E+          +    F  G+H   VEQLT+ +  +
Sbjct: 38  VRGLIARNEGELEEAMECFQKAYELSGRNKRYYYEIGRCNFLLGRHQIAVEQLTKASEVM 97

Query: 253 TNHGPTKSHSYYNLARS-YHSKGDYEKAGLYY--------MASVKEINKPHEFIFPYYGL 303
            N+       +Y LAR+ YH   +  ++G  +        + S  +I +    I     L
Sbjct: 98  KNNPKV----WYWLARAIYHFPAEKMESGKTFNPVESARTVLSKDDIARDATLIC---FL 150

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G++  +L D   A+  +   L++ PDN E +  LG IY+++G++++    L      DP 
Sbjct: 151 GRLCEELDDKEGAIQAYNNALKLQPDNTEVMNLLGLIYLRMGKVQEGFMQLGNCLAYDPS 210

Query: 364 DAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
           ++QA + +G ++ + SD   AL+ ++ A  +    G      + NNIG+    + +  +A
Sbjct: 211 NSQAILTIGSIMQNHSDHDVALNKYRVAADVCDYNG-----CLWNNIGIGLLARNKAAAA 265

Query: 423 HQSFKDA 429
           H + K A
Sbjct: 266 HSALKKA 272


>gi|326434630|gb|EGD80200.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 829

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 157/381 (41%), Gaps = 65/381 (17%)

Query: 99  VEQASSAFKIVLEADRDNVPALL---GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +E  +  F  V +A +D + A      +A VE  + R  D  E +            A+ 
Sbjct: 228 IESWAGGFGAVNQAVKDQLRAWCLDNAEAAVEGMQARGEDDTEVF-----------AALC 276

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQL--------DPENVEALVALAVMDLQANEAAGIRK 207
             +GL   + G+  KAR+ F++A  +         P   +A + L    L  ++     +
Sbjct: 277 SQVGLVLREFGEHNKAREYFEKAKAIYVETLGEKHPSTADAYINLG---LTYDDKGDFDQ 333

Query: 208 GMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQH-----FLVEQLTETALAVTN 254
            ++  Q+A +I        +P  A   + L N ++  G++     +  E L  T+ A+  
Sbjct: 334 AIDLYQKAKQIQAETLGNNHPGTAAVCSSLGNAYYAKGKYDKAIAYYQEDLAITSEALGE 393

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN------KPHEFIFPYYGLGQVQL 308
             P+ + +Y N+   Y+++G+Y+ A   Y  ++ EIN      K       +  +G V  
Sbjct: 394 KHPSAAQTYSNIGNVYYAQGEYDSAIKQYEKAM-EINLEALGEKHPGTANTHNNIGNVYF 452

Query: 309 KLGDFRSALTNFEKVLEIY--------PDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
             G++  A+ +FEK  ++Y        P      K +G+     G+ + A E    A  I
Sbjct: 453 GKGEYDRAIEHFEKARKVYVETLGEKHPTTAIAYKGIGNALSSKGEHDTAIEYYAAAKAI 512

Query: 361 --------DPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL-LKKAGEEVPIE--VLNN 408
                    P  A++F D G       + G A+D  + A+ + L+  GEE P      NN
Sbjct: 513 RLETLGPTHPDTAESFSDFGNAHSEIGEYGVAIDHLEAAKEIHLQTLGEEHPTTAYTFNN 572

Query: 409 IGVIHFEKGEFESAHQSFKDA 429
           +   + + GE+  A + ++ A
Sbjct: 573 LAAAYDDMGEYSKAMKYYERA 593



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 13/114 (11%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYY-----MASVKEINKPHEFIFPYYGLGQVQLKLG 311
           PT ++++ NLA +Y   G+Y KA  YY     + +     K         GLG +  K+G
Sbjct: 564 PTTAYTFNNLAAAYDDMGEYSKAMKYYERARAIKAAVLGEKHSSMASTCTGLGNLYSKMG 623

Query: 312 DFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
               A+  FEK  EI        +P    TL+++G  + + G++++A+    +A
Sbjct: 624 KHAEAIQCFEKAKEIQVATLGEVHPTTALTLESIGAEFAEQGRMDRARVFFEQA 677


>gi|302339630|ref|YP_003804836.1| hypothetical protein Spirs_3144 [Spirochaeta smaragdinae DSM 11293]
 gi|301636815|gb|ADK82242.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 384

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 17/319 (5%)

Query: 80  MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEF 139
           ++E S    +G  LL +    +A   F+ +L+ D  N  AL+G       RG + D++ +
Sbjct: 27  LNEISELSKRGYQLLKENLTGEAERCFEKILQHDEFNNYALVGMGDASRKRGHFRDAITY 86

Query: 140 YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 199
           Y+R LQ H     A+  G+  C   L +   A + ++R LQ D +NV  L  +A      
Sbjct: 87  YQRCLQHHDGNNYAL-FGLADCYKALNKYDDAIKIWERYLQHDEKNVTVLTRVAD---AY 142

Query: 200 NEAAGIRKGMEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
            +    R   E   +  EI    PY  + L +L  H+ F  ++    Q  E  L V    
Sbjct: 143 RKVKDFRHSKEVYLQVLEIEPDNPYALIGLGHL--HYDFR-EYEQALQYWERMLQVKKE- 198

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
                   +L   +     Y + GL Y     E+ +P  F +  +G+      +     +
Sbjct: 199 SVDIRVLTSLGNCHRKLKTYAQ-GLEYFHKALEL-EPQNF-YALFGMADCYRGMDHHADS 255

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           L  + ++L++ P N   L   G  Y  +G  + A+E  RKA  I   +   +  LG  LI
Sbjct: 256 LEYWHRILKLDPHNKVILTRAGDAYRCMGDYDNAEEYYRKALNI---EFDVYAILGLALI 312

Query: 377 SSDTGAALDAFKTARTLLK 395
           +   G   +A ++   LLK
Sbjct: 313 NKARGNYEEAIESLYGLLK 331



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 47/259 (18%)

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQ 167
           VLE + DN  AL+G   + ++   Y  +L++++R LQV   S    +   +G C  KL  
Sbjct: 158 VLEIEPDNPYALIGLGHLHYDFREYEQALQYWERMLQVKKESVDIRVLTSLGNCHRKLKT 217

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
             +  + F +AL+L+P+N  AL  +A             +GM+    + E +        
Sbjct: 218 YAQGLEYFHKALELEPQNFYALFGMA----------DCYRGMDHHADSLEYW-------- 259

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
                      H +++      + +T  G            +Y   GDY+ A  YY  ++
Sbjct: 260 -----------HRILKLDPHNKVILTRAGD-----------AYRCMGDYDNAEEYYRKAL 297

Query: 288 KEINKPHEF-IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
                  EF ++   GL  +    G++  A+ +   +L+  P N      +   Y+ LGQ
Sbjct: 298 NI-----EFDVYAILGLALINKARGNYEEAIESLYGLLKDDPKNHRLYTEIAECYLALGQ 352

Query: 347 IEKAQELLRKAAKIDPRDA 365
             KA E+L    ++  R++
Sbjct: 353 KYKALEVLGDFQRLGIRNS 371


>gi|62821820|ref|NP_001017359.1| O-linked N-acetylglucosamine transferase isoform 1 [Danio rerio]
 gi|56967372|gb|AAW31870.1| O-GlcNAc transferase variant 1 [Danio rerio]
          Length = 1062

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 195/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 354

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F    +             NLA +L+Q      A + Y+  +     +
Sbjct: 355 -------EVFPEFAAAHS-------------NLASVLQQQGKLQEALMHYKEAIRISPTF 394

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 395 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 454

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 455 ALKLKPDFPDAYCNLA 470


>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 600

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 18/306 (5%)

Query: 59  REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP 118
           R   E +  A   +N+A +I+    + +  +G      G+ + A + F   ++ + D   
Sbjct: 287 RSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAY 346

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
           A   +     N G Y +++  + +A+Q++P    A     GL R  LG    A   + +A
Sbjct: 347 AYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAY-YNRGLARSDLGDDQGAIADYNQA 405

Query: 179 LQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY--LANHFF 234
           +Q++P+   A     LA  +L  ++ A     +    +A +I P  A A N   LA    
Sbjct: 406 IQINPDLAAAYNNRGLARSNLGDDQGA-----LADYNQAIQINPDLAAAYNNRGLARSDL 460

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
              Q  + +     A+ +    P  + +YYN   +  + GDY+ A   +  ++K IN P 
Sbjct: 461 GDYQEAIAD--FNQAIKIN---PDDADAYYNRGNARSNLGDYQGAIADFTQAIK-IN-PG 513

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           +    YY  G  +  LGD++ A+ ++ + +++ PD        G  Y  LG   KA E  
Sbjct: 514 D-ADAYYNRGNARSDLGDYQGAIADYNQAIKLNPDYAAAYGNRGLAYRDLGDKPKALEDF 572

Query: 355 RKAAKI 360
           R+AA +
Sbjct: 573 RQAATL 578



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/370 (21%), Positives = 150/370 (40%), Gaps = 36/370 (9%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y +A +++  +   +  +G      G+ E+A + F   ++ + D+  A   +     + G
Sbjct: 130 YTQAIQLNPDDAIAYNNRGLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLG 189

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 190
            Y  ++  Y +A++++P    A     G  R  L     A   + +A+QL+P++ +A   
Sbjct: 190 DYQGAIADYTQAIKINPDYADAYN-NRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSN 248

Query: 191 -ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
              A  DL+  + A     +    +A +I P  A A N          +      L +  
Sbjct: 249 RGAARSDLEDYQGA-----IADFNQAIQINPDFAYAYN---------NRGVARSDLEDYQ 294

Query: 250 LAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIFPYYG 302
            A+ +        P  +++YYN   +    GD + A    +A   + I    +F + YY 
Sbjct: 295 GAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGA----IADFNQAIQLNPDFAYAYYN 350

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G  +  LGD+  A+ +F + +++ PD+       G     LG  + A     +A +I+P
Sbjct: 351 RGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINP 410

Query: 363 RDAQAFID--LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
             A A+ +  L    +  D GA  D  +  +     A         NN G+   + G+++
Sbjct: 411 DLAAAYNNRGLARSNLGDDQGALADYNQAIQINPDLAA------AYNNRGLARSDLGDYQ 464

Query: 421 SAHQSFKDAL 430
            A   F  A+
Sbjct: 465 EAIADFNQAI 474



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 22/324 (6%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           E++  A   +N+A +I+      +  +G      G+ + A + +   ++ + D+  A   
Sbjct: 87  ENYQGAIADFNQAIKINPDYAIAYYNRGLARSNLGDYQGAIADYTQAIQLNPDDAIAYNN 146

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +     N G Y +++  + +A+Q++P    A     GL R  LG    A   + +A++++
Sbjct: 147 RGLARSNLGDYEEAIADFAQAIQLNPDDATAY-YNRGLARSDLGDYQGAIADYTQAIKIN 205

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL-ANHFFFTGQHFL 241
           P+  +A           N     R  +E  Q A   Y   A+ LN   A  +   G    
Sbjct: 206 PDYADAY----------NNRGNARSNLEDYQGAIADYT-QAIQLNPDDAKAYSNRGAARS 254

Query: 242 VEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
             +  + A+A  N      P  +++Y N   +     DY+ A   +  ++ +IN   ++ 
Sbjct: 255 DLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAI-QINP--DYA 311

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             YY  G  +  LGD + A+ +F + +++ PD        G+    LG  E+A     +A
Sbjct: 312 NAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQA 371

Query: 358 AKIDPRDAQAFIDLGELLISSDTG 381
            +++P DA A+ + G  L  SD G
Sbjct: 372 IQLNPDDATAYYNRG--LARSDLG 393



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 127/320 (39%), Gaps = 54/320 (16%)

Query: 59  REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA---FKIVLEADRD 115
           R   E +  A   +N+A +I+      +  +G   +A+ ++E    A   F   ++ + D
Sbjct: 253 RSDLEDYQGAIADFNQAIQINPDFAYAYNNRG---VARSDLEDYQGAIADFNQAIQINPD 309

Query: 116 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
              A   +     + G    ++  + +A+Q++P    A     G  R  LG   +A   F
Sbjct: 310 YANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAY-YNRGNARSNLGDYEEAIADF 368

Query: 176 QRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
            +A+QL+P++  A     LA  DL  ++ A     +    +A +I P  A A N      
Sbjct: 369 AQAIQLNPDDATAYYNRGLARSDLGDDQGA-----IADYNQAIQINPDLAAAYN------ 417

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 293
                               N G  +S    NL     +  DY +A         +IN  
Sbjct: 418 --------------------NRGLARS----NLGDDQGALADYNQA--------IQINP- 444

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
            +    Y   G  +  LGD++ A+ +F + ++I PD+ +     G+    LG  + A   
Sbjct: 445 -DLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIAD 503

Query: 354 LRKAAKIDPRDAQAFIDLGE 373
             +A KI+P DA A+ + G 
Sbjct: 504 FTQAIKINPGDADAYYNRGN 523



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  +  YY  A +Y+   +Y+ A   +  ++K IN   ++   YY  G  +  LGD++ A
Sbjct: 70  PNNAEVYYLRANAYYQLENYQGAIADFNQAIK-INP--DYAIAYYNRGLARSNLGDYQGA 126

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           + ++ + +++ PD+       G     LG  E+A     +A +++P DA A+ + G  L 
Sbjct: 127 IADYTQAIQLNPDDAIAYNNRGLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRG--LA 184

Query: 377 SSDTG 381
            SD G
Sbjct: 185 RSDLG 189



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 144/353 (40%), Gaps = 62/353 (17%)

Query: 83  PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 142
           P+  +G   +L+      Q + A   ++ A +  V  L+  A ++  +G Y  ++  Y +
Sbjct: 9   PAALIGTAIVLVQP----QFAVALTNLVVAQQPTVQNLINSARIKAEKGDYQGAIADYNQ 64

Query: 143 ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 202
           ALQ+ P+      L      Y+L     A   F +A++++P+   A     +        
Sbjct: 65  ALQLSPNNAEVYYLRAN-AYYQLENYQGAIADFNQAIKINPDYAIAYYNRGLA------- 116

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
              R  +   Q A   Y   A+ LN                   + A+A  N G      
Sbjct: 117 ---RSNLGDYQGAIADYT-QAIQLN------------------PDDAIAYNNRG------ 148

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
              LARS  + GDYE+A +   A   ++N P +    YY  G  +  LGD++ A+ ++ +
Sbjct: 149 ---LARS--NLGDYEEA-IADFAQAIQLN-PDDAT-AYYNRGLARSDLGDYQGAIADYTQ 200

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 382
            ++I PD  +     G+    L   + A     +A +++P DA+A+         S+ GA
Sbjct: 201 AIKINPDYADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAKAY---------SNRGA 251

Query: 383 A---LDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A   L+ ++ A     +A +  P      NN GV   +  +++ A   F  A+
Sbjct: 252 ARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAI 304


>gi|326436271|gb|EGD81841.1| kinesin light chain isoform 1 [Salpingoeca sp. ATCC 50818]
          Length = 659

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 97/236 (41%), Gaps = 30/236 (12%)

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYH 271
           E +P  A   N L   +   G+H       E ALA+         P+ + SY NL  +YH
Sbjct: 172 EKHPSTANTYNNLGLAYDSKGEHARGIHYYEKALAIRVETLGEKHPSTATSYNNLGSAYH 231

Query: 272 SKGDYEKAGLYYMAS----VKEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI 326
           SKGDY++A  +Y  +    V+ + + H      Y GLG      G++  A+  +EK L I
Sbjct: 232 SKGDYDRAIAFYEKALAIRVEMLGEKHPSTADSYLGLGNAYYSKGEYDKAIAFYEKALAI 291

Query: 327 --------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFID 370
                   +P    T   LG  Y   G+ +KA     KA  I         P  A  + +
Sbjct: 292 TVETLGEKHPSTASTYNNLGSAYYSKGEYDKAIAFYEKALAITVETLGEKHPSTASTYNN 351

Query: 371 LGELLISSDTGAALDAF--KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESA 422
           LG    S        AF  K     ++  GE+ P   +   N+G+ +  KG+++ A
Sbjct: 352 LGSAYYSKGEYDKAIAFYEKALAITVETLGEKHPSTADTYGNLGIAYHSKGDYDRA 407



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 132/340 (38%), Gaps = 68/340 (20%)

Query: 129 NRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           ++G Y  ++ +Y++AL V        HPS        +GL     G+  +    +++AL 
Sbjct: 148 SKGEYDKAIAYYEKALAVFVETLGEKHPSTANTYN-NLGLAYDSKGEHARGIHYYEKALA 206

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           +  E +                              E +P  A + N L + +   G + 
Sbjct: 207 IRVETLG-----------------------------EKHPSTATSYNNLGSAYHSKGDYD 237

Query: 241 LVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASVKEIN 291
                 E ALA+         P+ + SY  L  +Y+SKG+Y+KA  +Y      +V+ + 
Sbjct: 238 RAIAFYEKALAIRVEMLGEKHPSTADSYLGLGNAYYSKGEYDKAIAFYEKALAITVETLG 297

Query: 292 KPHEFIFPYY-GLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYV 342
           + H      Y  LG      G++  A+  +EK L I        +P    T   LG  Y 
Sbjct: 298 EKHPSTASTYNNLGSAYYSKGEYDKAIAFYEKALAITVETLGEKHPSTASTYNNLGSAYY 357

Query: 343 QLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 393
             G+ +KA     KA  I         P  A  + +LG    S  D   A+   +    +
Sbjct: 358 SKGEYDKAIAFYEKALAITVETLGEKHPSTADTYGNLGIAYHSKGDYDRAIHFHEKDLAI 417

Query: 394 LKKA-GEEVPIEVLN--NIGVIHFEKGEFESAHQSFKDAL 430
             +A GE+ P    +  NIG+++ ++G+ E A    + AL
Sbjct: 418 TVEALGEKHPSVATSYFNIGLLYDKRGDKEQACAYIQHAL 457



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 86/215 (40%), Gaps = 27/215 (12%)

Query: 243 EQLTETALAVTNH--GPTKSHSYYNLARSYHSKGDYEKAGLYYMAS----VKEINKPHEF 296
           E  T     + NH  G   + ++ NL  +Y SKG+Y+KA  YY  +    V+ + + H  
Sbjct: 117 EDSTGAFAGLCNHVGGERGADTFGNLGIAYASKGEYDKAIAYYEKALAVFVETLGEKHPS 176

Query: 297 IF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQI 347
               Y  LG      G+    +  +EK L I        +P    +   LG  Y   G  
Sbjct: 177 TANTYNNLGLAYDSKGEHARGIHYYEKALAIRVETLGEKHPSTATSYNNLGSAYHSKGDY 236

Query: 348 EKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF--KTARTLLKKA 397
           ++A     KA  I         P  A +++ LG    S        AF  K     ++  
Sbjct: 237 DRAIAFYEKALAIRVEMLGEKHPSTADSYLGLGNAYYSKGEYDKAIAFYEKALAITVETL 296

Query: 398 GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           GE+ P      NN+G  ++ KGE++ A   ++ AL
Sbjct: 297 GEKHPSTASTYNNLGSAYYSKGEYDKAIAFYEKAL 331



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 53/241 (21%)

Query: 68  ATQYYNKA--SRIDM---HEPST---WVGKGQLLLAKGEVEQASS----AFKIVLEADRD 115
           A  +Y KA   R++M     PST   ++G G    +KGE ++A +    A  I +E   +
Sbjct: 239 AIAFYEKALAIRVEMLGEKHPSTADSYLGLGNAYYSKGEYDKAIAFYEKALAITVETLGE 298

Query: 116 NVPAL------LGQACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLC 161
             P+       LG A   +++G Y  ++ FY++AL +        HPS        +G  
Sbjct: 299 KHPSTASTYNNLGSA--YYSKGEYDKAIAFYEKALAITVETLGEKHPSTASTYN-NLGSA 355

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 221
            Y  G+  KA   +++AL +    VE L                    EK     + Y  
Sbjct: 356 YYSKGEYDKAIAFYEKALAI---TVETL-------------------GEKHPSTADTYGN 393

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
             +A  Y +   +    HF  + L  T  A+    P+ + SY+N+   Y  +GD E+A  
Sbjct: 394 LGIA--YHSKGDYDRAIHFHEKDLAITVEALGEKHPSVATSYFNIGLLYDKRGDKEQACA 451

Query: 282 Y 282
           Y
Sbjct: 452 Y 452


>gi|407923342|gb|EKG16415.1| Tetratricopeptide TPR-1 [Macrophomina phaseolina MS6]
          Length = 1425

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 134/329 (40%), Gaps = 39/329 (11%)

Query: 140 YKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA----- 193
           + +A++  P+  P    LGI    Y   +  +ARQ FQ+A +L P  +EA   LA     
Sbjct: 555 FLQAIKTDPNIAPAYTSLGIFYQDYARDK-KRARQCFQKAFELSPSELEAAERLARSFAD 613

Query: 194 --------VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
                   V+  +A E+   R      ++    +P+ AM +  +    +    +  +   
Sbjct: 614 QGEWDIVEVIAERAIESGKCRPAPGSKKKKGVSWPFSAMGIVQMNRQEYSKSVYSFL--- 670

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA--GLYYMASVK---EINKPHEFIFPY 300
             +AL ++   P   HSY  L  SYH+ G Y  A     Y  S     +I KP E  F  
Sbjct: 671 --SALRIS---PDDYHSYVGLGESYHNSGRYNSALRTFNYAESPTDGIQIKKPEENWFTK 725

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y L  V  +LG +  A+T +++VLE  P       AL    V+ G          KAA  
Sbjct: 726 YMLANVNRELGLYDEAVTGYKEVLETRPGEFGVQIALLQTLVERGWRLIETGFFGKAAD- 784

Query: 361 DPRDAQAFIDLGELLISSDTGA-----ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 415
               A A I++ + ++     A     AL    +  T ++   EE+P E +  +     E
Sbjct: 785 ---SALAAIEVAKTVVEQKPEAFNLWKALGDACSLFTWVQSRMEELPFEKVKALLEAGIE 841

Query: 416 KGEFESAHQSFKDALGDGIWLTLLDSKTK 444
             EF+   ++  D +G      LLD  T+
Sbjct: 842 VNEFDLFSET--DGVGQAQLFALLDLSTE 868


>gi|66347871|ref|NP_001018116.1| O-linked N-acetylglucosamine transferase isoform 3 [Danio rerio]
 gi|56967376|gb|AAW31872.1| O-GlcNAc transferase variant 3 [Danio rerio]
          Length = 1046

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 195/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 354

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F    +             NLA +L+Q      A + Y+  +     +
Sbjct: 355 -------EVFPEFAAAHS-------------NLASVLQQQGKLQEALMHYKEAIRISPTF 394

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 395 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 454

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 455 ALKLKPDFPDAYCNLA 470


>gi|301111123|ref|XP_002904641.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
 gi|262095958|gb|EEY54010.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
          Length = 579

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 22/251 (8%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G++  + + Y RA+Q++P    A     G    K+ +   A + + +AL++DP N  AL 
Sbjct: 237 GKFQAAADEYSRAIQLNPQHFKAF-FNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALY 295

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
              +   ++ +  G    +    RA E+ P          N  F+  + F   +     L
Sbjct: 296 NRGISLDRSGDYQG---ALTDFTRAIELLP---------TNADFYHNRGFCHRKQGNFEL 343

Query: 251 AVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
           A+ ++       P    S YN A SY   G Y++A   Y A+++   +P E    Y+  G
Sbjct: 344 AIADYSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRV--EP-ENANAYHNRG 400

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
               K+ D   A+ +F++ + + P +  +  + G  Y QLG+ ++A +    A  +DPR 
Sbjct: 401 STYDKMRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFALALTLDPRS 460

Query: 365 AQAFIDLGELL 375
           A  + + G  L
Sbjct: 461 AVFYHNRGYCL 471



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 127/306 (41%), Gaps = 10/306 (3%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           +K   F  A + Y +A ++D H       +G  L   G+ + A + F   +E    N   
Sbjct: 268 DKIRRFDAAVEDYTQALKMDPHNAFALYNRGISLDRSGDYQGALTDFTRAIELLPTNADF 327

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
              +      +G +  ++  Y RA++ +P+   ++         KLG+  +A Q +  AL
Sbjct: 328 YHNRGFCHRKQGNFELAIADYSRAIEFNPNHFKSL-YNRAYSYDKLGRYQEAAQDYTAAL 386

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           +++PEN  A           ++     + +    RA  + P    + N     +   G+H
Sbjct: 387 RVEPENANAYHNRGST---YDKMRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRH 443

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
              E L + ALA+T   P  +  Y+N      + G +E+A   Y +++    +P   +  
Sbjct: 444 --QEALQDFALALT-LDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALAL--EPRN-VAA 497

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y   G    KL  F+ A+ ++   L I P N  TL    +   ++  IE+A     +   
Sbjct: 498 YNNRGYALRKLRRFQEAVADYTTALTIDPQNTRTLSNRAYSLAKMQHIEEAIADYSQILT 557

Query: 360 IDPRDA 365
           +DP+++
Sbjct: 558 LDPQNS 563



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 9/175 (5%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  + + YN   S    GDY+ A   +  +++ +    +F   Y+  G    K G+F  A
Sbjct: 288 PHNAFALYNRGISLDRSGDYQGALTDFTRAIELLPTNADF---YHNRGFCHRKQGNFELA 344

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           + ++ + +E  P++ ++L    + Y +LG+ ++A +    A +++P +A A+ + G    
Sbjct: 345 IADYSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRVEPENANAYHNRGSTYD 404

Query: 377 S-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              DT  A+  F  A  L  ++     +   N+ G+ + + G  + A Q F  AL
Sbjct: 405 KMRDTTRAIADFDRAIALQPRS-----VSSYNSRGLCYDQLGRHQEALQDFALAL 454


>gi|397665008|ref|YP_006506546.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
 gi|395128419|emb|CCD06633.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
          Length = 577

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 149/367 (40%), Gaps = 29/367 (7%)

Query: 20  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 76
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAR 66

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILH 185

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           L+ N  +   +   K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPDNLEYL---YNSGVAQMALGHLNEA 296

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALAINPDDV-----VSRHML 351

Query: 377 SSDTGAA 383
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|434399045|ref|YP_007133049.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
           cyanosphaera PCC 7437]
 gi|428270142|gb|AFZ36083.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
           cyanosphaera PCC 7437]
          Length = 723

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 37/375 (9%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   YN+   +   + + W+    +L   G +E+A  ++   LE   D+  A   +  V 
Sbjct: 164 AIASYNRVIELKPDDATVWLNHSNVLTNLGRLEEAVVSYNRALELKPDDANAWYNRGNVL 223

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + GR ++++  Y RAL++ P    A     G     LG+L +A  ++ RAL+L P +  
Sbjct: 224 NDLGRLNEAVANYDRALELKPDDATAW-FKRGNVLNDLGRLEEAVVSYNRALELKPNDA- 281

Query: 188 ALVALAVMDLQANEAAGIR------KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
                   ++  N   G++      + +   +RA ++ P  A A       +F  G   L
Sbjct: 282 --------NIWFNHGIGLKNLGRLEEAVASYERAIKLKPNDASA-------WFNRGNALL 326

Query: 242 VEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
             +  E A+A  +      P  +  ++N   +  + G  ++A   Y  S+ E+       
Sbjct: 327 KLKCDEEAIASYDRSIELKPDDATVWHNRGIALKNLGRLKEAVASYDRSI-ELKSDDASA 385

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
           +   G+    LK  +   AL + ++ LEI P+  E     G     L ++E+A     + 
Sbjct: 386 WHNRGIALNDLKRHE--EALASCDRALEINPNYVEAWFERGKTLDNLNRLEEAVTSYERV 443

Query: 358 AKIDPRDAQAFIDLGELLIS--SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 415
            K+ P  A A +  G LL         AL  F  A   LK A E   + V   + +I+  
Sbjct: 444 IKLQPDHALALLYQGALLCDYLQRYEEALTNFNQA---LKFAPENPNVWVNRGVALINLN 500

Query: 416 KGEFESAHQSFKDAL 430
           +   E A  S+K AL
Sbjct: 501 R--LEEAVASYKRAL 513



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 144/350 (41%), Gaps = 34/350 (9%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+++  +   + S W  +G  L      E+A ++    LE + + V A   +    
Sbjct: 368 AVASYDRSIELKSDDASAWHNRGIALNDLKRHEEALASCDRALEINPNYVEAWFERGKTL 427

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            N  R  +++  Y+R +++ P    A+   G  LC Y L +  +A   F +AL+  PEN 
Sbjct: 428 DNLNRLEEAVTSYERVIKLQPDHALALLYQGALLCDY-LQRYEEALTNFNQALKFAPENP 486

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
              V   V  +  N    + + +   +RA E+ P           H + +    L + L 
Sbjct: 487 NVWVNRGVALINLNR---LEEAVASYKRALELQPKNP--------HAWLSQGALLCDYLQ 535

Query: 247 ETALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFP 299
               A+TN        P   + + N   +  +    E+A   Y  +++ +   PH +   
Sbjct: 536 RYEEALTNFNQALKFAPENPNVWVNRGVALINLNRLEEAVASYKRALELQPKNPHAW--- 592

Query: 300 YYGLGQVQL---KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
              L Q  L    L  +  ALT+FE+V+E+ P+N       G   + L ++E A     +
Sbjct: 593 ---LSQGALLCDYLQRYEEALTSFERVIELQPNNVNAWVNRGVALINLDRLEAALASYDR 649

Query: 357 AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL 406
           A ++ P +  A+++ G LL        L  ++ A T  ++A E  P   L
Sbjct: 650 ALELQPNNVNAWLNKGALLCDR-----LQRYEEALTNFERAIELQPNNAL 694



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 97/440 (22%), Positives = 176/440 (40%), Gaps = 52/440 (11%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAIL--NALGVYYTYLGKIETKQREKE 62
           +FK+G V      LEE          A V Y R   L  N   +++ +   ++   R +E
Sbjct: 250 WFKRGNVLNDLGRLEE----------AVVSYNRALELKPNDANIWFNHGIGLKNLGRLEE 299

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
                A   Y +A ++  ++ S W  +G  LL     E+A +++   +E   D+      
Sbjct: 300 -----AVASYERAIKLKPNDASAWFNRGNALLKLKCDEEAIASYDRSIELKPDDATVWHN 354

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +     N GR  +++  Y R++++      A     G+    L +  +A  +  RAL+++
Sbjct: 355 RGIALKNLGRLKEAVASYDRSIELKSDDASAWH-NRGIALNDLKRHEEALASCDRALEIN 413

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P  VEA           N    + + +   +R  ++ P  A+AL        + G   L 
Sbjct: 414 PNYVEAWFERGKTLDNLNR---LEEAVTSYERVIKLQPDHALAL-------LYQGA-LLC 462

Query: 243 EQLTETALAVTN------HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHE 295
           + L     A+TN        P   + + N   +  +    E+A   Y  +++ +   PH 
Sbjct: 463 DYLQRYEEALTNFNQALKFAPENPNVWVNRGVALINLNRLEEAVASYKRALELQPKNPHA 522

Query: 296 FIFPYYGLGQVQL---KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
           +      L Q  L    L  +  ALTNF + L+  P+N       G   + L ++E+A  
Sbjct: 523 W------LSQGALLCDYLQRYEEALTNFNQALKFAPENPNVWVNRGVALINLNRLEEAVA 576

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIG 410
             ++A ++ P++  A++  G LL        L  ++ A T  ++  E  P  +    N G
Sbjct: 577 SYKRALELQPKNPHAWLSQGALLCDY-----LQRYEEALTSFERVIELQPNNVNAWVNRG 631

Query: 411 VIHFEKGEFESAHQSFKDAL 430
           V        E+A  S+  AL
Sbjct: 632 VALINLDRLEAALASYDRAL 651



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 124/275 (45%), Gaps = 14/275 (5%)

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
           E+A +++   +E   D+  A   +A    N GR ++++  Y RA+++ P    A     G
Sbjct: 26  EEALASYDRAIELKPDDANAWYNRAITLSNLGRLNEAVANYDRAIELQPDDATAW-YNRG 84

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
                LG+L +A  ++  A++L   N +   A     +       + + +   +RA ++ 
Sbjct: 85  NALDDLGRLEEALASYNHAIEL---NSDLAFAWHNRGIALRNLGRLEEALASCERATKLA 141

Query: 220 PYCAMALNYLANHFFFTGQHFL--VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           P      +++ ++  +T  H L  +++   +   V    P  +  + N +    + G  E
Sbjct: 142 P----EFDFIWHNHGYT-LHLLGRLQEAIASYNRVIELKPDDATVWLNHSNVLTNLGRLE 196

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A + Y  +++   KP +    +Y  G V   LG    A+ N+++ LE+ PD+       
Sbjct: 197 EAVVSYNRALEL--KPDD-ANAWYNRGNVLNDLGRLNEAVANYDRALELKPDDATAWFKR 253

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           G++   LG++E+A     +A ++ P DA  + + G
Sbjct: 254 GNVLNDLGRLEEAVVSYNRALELKPNDANIWFNHG 288



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/309 (20%), Positives = 125/309 (40%), Gaps = 44/309 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y++A  +   + + W  +G  L   G +E+A +++   +E + D   A   +    
Sbjct: 62  AVANYDRAIELQPDDATAWYNRGNALDDLGRLEEALASYNHAIELNSDLAFAWHNRGIAL 121

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            N GR  ++L   +RA ++ P     I    G   + LG+L +A  ++ R ++L P+  +
Sbjct: 122 RNLGRLEEALASCERATKLAPEF-DFIWHNHGYTLHLLGRLQEAIASYNRVIELKPD--D 178

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A V L   ++  N    + + +    RA E+                             
Sbjct: 179 ATVWLNHSNVLTN-LGRLEEAVVSYNRALEL----------------------------- 208

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
                    P  ++++YN     +  G   +A   Y  +++   KP +    ++  G V 
Sbjct: 209 --------KPDDANAWYNRGNVLNDLGRLNEAVANYDRALEL--KPDDAT-AWFKRGNVL 257

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             LG    A+ ++ + LE+ P++       G     LG++E+A     +A K+ P DA A
Sbjct: 258 NDLGRLEEAVVSYNRALELKPNDANIWFNHGIGLKNLGRLEEAVASYERAIKLKPNDASA 317

Query: 368 FIDLGELLI 376
           + + G  L+
Sbjct: 318 WFNRGNALL 326



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 19/211 (9%)

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
           +A  ++ RA++L P++  A    A+     +    + + +    RA E+ P  A A    
Sbjct: 27  EALASYDRAIELKPDDANAWYNRAIT---LSNLGRLNEAVANYDRAIELQPDDATAWYNR 83

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
            N     G+        E ALA  NH        + +++N   +  + G  E+A    +A
Sbjct: 84  GNALDDLGR-------LEEALASYNHAIELNSDLAFAWHNRGIALRNLGRLEEA----LA 132

Query: 286 SVKEINK-PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
           S +   K   EF F ++  G     LG  + A+ ++ +V+E+ PD+        ++   L
Sbjct: 133 SCERATKLAPEFDFIWHNHGYTLHLLGRLQEAIASYNRVIELKPDDATVWLNHSNVLTNL 192

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           G++E+A     +A ++ P DA A+ + G +L
Sbjct: 193 GRLEEAVVSYNRALELKPDDANAWYNRGNVL 223


>gi|29653887|ref|NP_819579.1| hypothetical protein CBU_0547 [Coxiella burnetii RSA 493]
 gi|161831595|ref|YP_001596478.1| TPR repeat-containing methyltransferase [Coxiella burnetii RSA 331]
 gi|29541150|gb|AAO90093.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493]
 gi|161763462|gb|ABX79104.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii RSA 331]
          Length = 561

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 29/318 (9%)

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           LL +A  +  +G   ++LE Y + L+  P    A+  G G+   +LG+  +A     RAL
Sbjct: 5   LLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALH-GAGIALSQLGRNDEALHYIDRAL 63

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFT 236
            L+P+N          + + N  +   K +E      +A ++ P  A A N +AN FF  
Sbjct: 64  LLEPQNA------TFQNSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQ 117

Query: 237 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE---INKP 293
            +    ++  + A+A+    P  +++++N AR      +Y +A    +A +K    ++  
Sbjct: 118 KKFDNAKKAYQKAIALK---PHFANAHFNYARLLIELENYHQA----IAELKRTVAMSSH 170

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
           H   F    L  V + LGDF  A+T +EK L + P+N +     G  +++  Q +KA + 
Sbjct: 171 HSAAFS--QLAHVYMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDY 228

Query: 354 LRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 412
              A  ++P        L    L   D   AL  +      L++  ++  IE   N+GV+
Sbjct: 229 FTNALLLNPEHPDCHYSLATAYLQRGDHKEALLHY------LRQLEKKPQIECYYNVGVL 282

Query: 413 HFEKGEFESAHQSFKDAL 430
           H  +     A   FK AL
Sbjct: 283 HMYQERHREAIDYFKQAL 300



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 16/301 (5%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +G ++ A   +  VLE D     AL G        GR  ++L +  RAL + P      +
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQ-NATFQ 73

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
              G    + G+L +A  A+ +A+QL P++  A   +A    +  +    +K     Q+A
Sbjct: 74  NSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQKKFDNAKKA---YQKA 130

Query: 216 FEIYPYCAMA-LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             + P+ A A  NY          H  + +L  T    ++H    S ++  LA  Y   G
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHH----SAAFSQLAHVYMYLG 186

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           D+ KA  YY    K +    E     Y  G   LK   F+ A+  F   L + P++ +  
Sbjct: 187 DFSKAITYYE---KRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCH 243

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDTG-AALDAFKTART 392
            +L   Y+Q G  ++A  LL    +++ +   + + ++G L +  +    A+D FK A T
Sbjct: 244 YSLATAYLQRGDHKEA--LLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALT 301

Query: 393 L 393
           L
Sbjct: 302 L 302



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 39/268 (14%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
            G+  ++   Y +A+Q+ P    A    I  C ++  +   A++A+Q+A+ L P    A 
Sbjct: 83  HGKLVEATIAYDQAIQLQPDHATAYN-NIANCFFRQKKFDNAKKAYQKAIALKPHFANAH 141

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ----------- 238
              A + +   E     + + +++R   +  + + A + LA+ + + G            
Sbjct: 142 FNYARLLI---ELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKR 198

Query: 239 -----------------HFLVEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDYEK 278
                            H    Q  +     TN     P     +Y+LA +Y  +GD+++
Sbjct: 199 LALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAYLQRGDHKE 258

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A L+Y+  +++  KP   I  YY +G + +     R A+  F++ L + P+  E    + 
Sbjct: 259 ALLHYLRQLEK--KPQ--IECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLNIA 314

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
            +Y+++ QI++A E       + P D++
Sbjct: 315 AVYLKINQIKQAIEHYESTLVLKPNDSE 342


>gi|268317298|ref|YP_003291017.1| hypothetical protein Rmar_1745 [Rhodothermus marinus DSM 4252]
 gi|262334832|gb|ACY48629.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
          Length = 402

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 159/380 (41%), Gaps = 39/380 (10%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
           ++ +Q  +   F  A    + A+R D  EP+ +  +G+L     + ++A +A++ VL+ D
Sbjct: 41  LQAEQALQRYDFAQALALADSAARYDSDEPAIYFLQGRLYAEMAQFDRAEAAYQEVLQRD 100

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
            +        A ++  + R+ +++  Y++ LQ +P  P      +     +LG +  A  
Sbjct: 101 PNFRGIWHNLANLKARQHRFREAIALYQKELQRYPGAP--TWQAMARAYRELGVVDSAAY 158

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 233
           A+++ALQLD   V A + +  +    ++     + +   QRA  + P      NYL    
Sbjct: 159 AYRQALQLDSTYVPAYIGMTQL---LDDEGRFAEALTYAQRAQALDPDNPET-NYLLGEL 214

Query: 234 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK--AGLYYMASVKEIN 291
                 F  E L      V    P  + ++Y+L ++    G  E+  A L     ++E+N
Sbjct: 215 LMKNGRF-AEALPYLQ-RVVEAWPWHAGAHYSLGQALLRVGRREEGEAALQRYEQLRELN 272

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
                        QVQ+            E+ +   PDN     ALG    + G+ E+A 
Sbjct: 273 ------------AQVQM-----------LEEAVRTTPDNPYAFAALGAALRRSGRYEEAL 309

Query: 352 ELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 410
                A  + P + +   +L  L  +  DT AA+  ++ A        +   I+   N+G
Sbjct: 310 RAYTIALFLSPGNPEILNNLAALYFVQGDTLAAMQTYRRALQ-----ADSTFIDAWLNLG 364

Query: 411 VIHFEKGEFESAHQSFKDAL 430
           V+H  +GE  +A  +++  L
Sbjct: 365 VLHALRGERAAAAYAWRQVL 384



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 122/300 (40%), Gaps = 37/300 (12%)

Query: 410 GVIHFEKGEFESAHQSFKDALGD-----GIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 464
           G ++ E  +F+ A  ++++ L       GIW  L + K + +    + ++ Q K++Q   
Sbjct: 77  GRLYAEMAQFDRAEAAYQEVLQRDPNFRGIWHNLANLKARQHRFREAIALYQ-KELQ--- 132

Query: 465 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 524
           R+          W        +AR   ++    +A+  YR  L     YV AY+ +  + 
Sbjct: 133 RYPGAPT-----WQA------MARAYRELGVVDSAAYAYRQALQLDSTYVPAYIGMTQLL 181

Query: 525 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 584
                   ++     A  ++   P    +LG+L +KN  + +A    +   +A       
Sbjct: 182 DDEGRFAEALTYAQRAQALDPDNPETNYLLGELLMKNGRFAEALPYLQRVVEAWPWHAG- 240

Query: 585 ATLSLGNWNYFAALRNEKRAPKLEATH-LEKAKELYTRV------IVQHTSNLYAANGAG 637
           A  SLG     A LR  +R     A    E+ +EL  +V      +     N YA    G
Sbjct: 241 AHYSLGQ----ALLRVGRREEGEAALQRYEQLRELNAQVQMLEEAVRTTPDNPYAFAALG 296

Query: 638 VVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
             L   G+++ +   +T     + G+     P++  NLA +YF QG+   AM+ Y+  L+
Sbjct: 297 AALRRSGRYEEALRAYTIALFLSPGN-----PEILNNLAALYFVQGDTLAAMQTYRRALQ 351


>gi|344345323|ref|ZP_08776177.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
           purpuratum 984]
 gi|343803152|gb|EGV21064.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
           purpuratum 984]
          Length = 544

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 135/348 (38%), Gaps = 57/348 (16%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LG I  ++R   E    A      A  ++  +P         LL  G  E A   ++  L
Sbjct: 98  LGLILLRRRHHAE----ALTVLEGALALEPRDPEILNAIATALLRLGRGEDALGYYRRTL 153

Query: 111 EADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
           E   D+  A   LG A  EF  GR  ++L+ Y RA  + P  P A      +C  +LG+L
Sbjct: 154 EVAPDHAEAHYNLGLALHEF--GRLDEALKCYVRANAIDPELPQACNNAGNVCN-QLGRL 210

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDLQAN--EAAGIRKGMEKMQRAFEIYPYCAMAL 226
            +A   F RAL  DP N + L  LA   ++A   EAA     +  ++RA  + P  A AL
Sbjct: 211 QQAIDWFSRALAQDPRNADVLNNLASAQIRACLFEAA-----LRTLERALALVPDHAEAL 265

Query: 227 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
           N   N     G+    +Q    AL V                    + DY  A       
Sbjct: 266 NNRGNALVELGRLEAAQQSYLDALRV--------------------RPDYADA------- 298

Query: 287 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
                        Y  LG V   L     A+ ++ + L + PD  E    LG++   L  
Sbjct: 299 -------------YCNLGNVLDLLCKPLQAIDSYRRALALKPDLAEASLNLGNVLRDLDH 345

Query: 347 IEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 393
           + +A     +A    P   +A  +LG LL    D  A++ A + ARTL
Sbjct: 346 LSEALVCYERALATRPDYPEALSNLGCLLQDLGDFDASIAAREHARTL 393



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 168/439 (38%), Gaps = 79/439 (17%)

Query: 175 FQRALQLDPENVEALVAL--------AVMDLQ----ANEAAGIRKGMEKM-------QRA 215
           ++  + +DP+   A  AL        AV D Q    A EA  +R G   +       +R 
Sbjct: 25  YRAVIAIDPDQAAAKAALRQLGTVDPAVPDEQVPWRAREALAVRIGAADLDGAEHEARRL 84

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
              +P    A   L         H     + E ALA+    P   ++   +A +    G 
Sbjct: 85  VASHPRDVFARKALGLILLRRRHHAEALTVLEGALALEPRDPEILNA---IATALLRLGR 141

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
            E A  YY  ++ E+   H     +Y LG    + G    AL  + +   I P+  +   
Sbjct: 142 GEDALGYYRRTL-EVAPDHAEA--HYNLGLALHEFGRLDEALKCYVRANAIDPELPQACN 198

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
             G++  QLG++++A +   +A   DPR+A    +L     S+   A L  F+ A   L+
Sbjct: 199 NAGNVCNQLGRLQQAIDWFSRALAQDPRNADVLNNLA----SAQIRACL--FEAALRTLE 252

Query: 396 KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
           +A   VP   E LNN G    E G  E+A QS+ DAL           + +    DA   
Sbjct: 253 RALALVPDHAEALNNRGNALVELGRLEAAQQSYLDAL-----------RVRPDYADA--- 298

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                       + N GN ++L          L + L+ I         YR  L    D 
Sbjct: 299 ------------YCNLGNVLDL----------LCKPLQAIDS-------YRRALALKPDL 329

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW---VKAKET 570
            +A L L  + +  ++L  ++     AL     YP ALS LG L     D+   + A+E 
Sbjct: 330 AEASLNLGNVLRDLDHLSEALVCYERALATRPDYPEALSNLGCLLQDLGDFDASIAAREH 389

Query: 571 FRAASDATDGKDSYATLSL 589
            R  S  +   DS    +L
Sbjct: 390 ARTLSHDSFAADSSLLFTL 408



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 134/358 (37%), Gaps = 71/358 (19%)

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
           +F    LG + L+      ALT  E  L + P + E L A+    ++LG+ E A    R+
Sbjct: 92  VFARKALGLILLRRRHHAEALTVLEGALALEPRDPEILNAIATALLRLGRGEDALGYYRR 151

Query: 357 AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 416
             ++ P  A+A  +LG  L   + G   +A K           E+P +  NN G +  + 
Sbjct: 152 TLEVAPDHAEAHYNLG--LALHEFGRLDEALKC-YVRANAIDPELP-QACNNAGNVCNQL 207

Query: 417 GEFESAHQSFKDALGDG-----IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
           G  + A   F  AL        +   L  ++ +  + +A+   L+ + + L        +
Sbjct: 208 GRLQQAIDWFSRALAQDPRNADVLNNLASAQIRACLFEAALRTLE-RALALV------PD 260

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
           H E   N+   L  L RL        AA   Y   L    DY DAY  L  +        
Sbjct: 261 HAEALNNRGNALVELGRL-------EAAQQSYLDALRVRPDYADAYCNLGNV-------- 305

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGN 591
             ++L+ + L+    Y  AL++  DL                         + A+L+LGN
Sbjct: 306 --LDLLCKPLQAIDSYRRALALKPDL-------------------------AEASLNLGN 338

Query: 592 WNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 649
                 LR        +  HL +A   Y R +        A +  G +L + G FD S
Sbjct: 339 -----VLR--------DLDHLSEALVCYERALATRPDYPEALSNLGCLLQDLGDFDAS 383


>gi|432118087|gb|ELK37988.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Myotis davidii]
          Length = 1046

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|31873825|emb|CAD97853.1| hypothetical protein [Homo sapiens]
          Length = 1046

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|197102526|ref|NP_001127296.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Pongo abelii]
 gi|55727502|emb|CAH90506.1| hypothetical protein [Pongo abelii]
          Length = 471

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI-----N 425

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 426 PAFADAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 102/462 (22%), Positives = 189/462 (40%), Gaps = 29/462 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDGSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL   ++     + +        AS
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKALE--VFPEFAAAHSNL------AS 369

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
           +LQ +  +L     +    + +         N+   L+++ D   A   Y   +     +
Sbjct: 370 VLQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
            DA+  LA+I K   N+  +I     ALK+   +P+A   L 
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 470



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 150/360 (41%), Gaps = 51/360 (14%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDGSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTL----------LKKA 397
           +A+    KA +  P  A A+ +LG +     +   A+  F+ A TL          L   
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV 234

Query: 398 GEEVPI-------------------EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 438
            +E  I                    V  N+  +++E+G  + A  +++ A+        
Sbjct: 235 LKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAI-------- 286

Query: 439 LDSKTKTYVIDASASMLQ-FKDMQLFHRFENDGNH-VELPWNKVTVLFNLARLLEQIHDT 496
              + + +  DA  ++    K+       E+  N  + L       L NLA +  +  + 
Sbjct: 287 ---ELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNI 343

Query: 497 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 556
             A  LYR  L  + ++  A+  LA++ + +  LQ ++    EA++++  + +A S +G+
Sbjct: 344 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 403


>gi|126342739|ref|XP_001362317.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Monodelphis domestica]
          Length = 1035

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|32307148|ref|NP_858058.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 1 [Homo sapiens]
 gi|397498834|ref|XP_003820179.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Pan paniscus]
 gi|426396356|ref|XP_004064413.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Gorilla gorilla gorilla]
 gi|68067509|sp|O15294.3|OGT1_HUMAN RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|18250915|emb|CAC86128.1| UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl
           transferase [Homo sapiens]
 gi|23315618|gb|AAH38180.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Homo sapiens]
 gi|30268372|emb|CAD89970.1| hypothetical protein [Homo sapiens]
 gi|119625691|gb|EAX05286.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Homo
           sapiens]
 gi|410227760|gb|JAA11099.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
 gi|410227764|gb|JAA11101.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
 gi|410257116|gb|JAA16525.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
 gi|410342219|gb|JAA40056.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
          Length = 1046

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|40063717|gb|AAR38498.1| TPR repeat protein [uncultured marine bacterium 583]
          Length = 733

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 10/248 (4%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           ++ G+  ++L+  +     +P+ P    +  G+C   +G+L +A ++F++AL + P+  E
Sbjct: 20  YSNGQIQEALDAVEALTTDYPNEPLLFNIS-GVCYKAVGELDEAVKSFEKALAIKPDYTE 78

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
               L    L   E   +   ++  ++A +I P  A A N L       GQ     Q  E
Sbjct: 79  VNYNLG---LTLQELGRLDAAVKSYEQALDIQPDYAEAHNNLGITLKELGQLDAAVQCYE 135

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            ALA+    P  + ++ NL  +       + A   Y  ++  IN   ++   +  LG V 
Sbjct: 136 KALAI---NPDYAEAHNNLGNALKDLNQLDAAVKSYEKTLA-INP--DYAEAHNNLGNVL 189

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             LG   +A+  +EK L I PD  E    LG++   + Q++ A +   KA  I+P  A+A
Sbjct: 190 KDLGQLDAAVKCYEKTLAINPDYAEAHNNLGNVLQDIDQLDAAVKCYEKALAINPDFAEA 249

Query: 368 FIDLGELL 375
           + + G +L
Sbjct: 250 YSNRGNVL 257



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 15/284 (5%)

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCP 151
           L + G++++A  A +  L  D  N P L   + V +   G   ++++ +++AL + P   
Sbjct: 19  LYSNGQIQEALDAVE-ALTTDYPNEPLLFNISGVCYKAVGELDEAVKSFEKALAIKPDY- 76

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
             +   +GL   +LG+L  A +++++AL + P+  EA   L +      E   +   ++ 
Sbjct: 77  TEVNYNLGLTLQELGRLDAAVKSYEQALDIQPDYAEAHNNLGI---TLKELGQLDAAVQC 133

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
            ++A  I P  A A N L N      Q     +  E  LA+    P  + ++ NL     
Sbjct: 134 YEKALAINPDYAEAHNNLGNALKDLNQLDAAVKSYEKTLAI---NPDYAEAHNNLGNVLK 190

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
             G  + A   Y  ++  IN   ++   +  LG V   +    +A+  +EK L I PD  
Sbjct: 191 DLGQLDAAVKCYEKTLA-INP--DYAEAHNNLGNVLQDIDQLDAAVKCYEKALAINPDFA 247

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           E     G++   L ++++A      A  I P     FI LG+LL
Sbjct: 248 EAYSNRGNVLKDLNRLDEALVSYESAIAIKPD--IDFI-LGDLL 288



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           Y LG    +LG   +A+ ++E+ L+I PD  E    LG    +LGQ++ A +   KA  I
Sbjct: 81  YNLGLTLQELGRLDAAVKSYEQALDIQPDYAEAHNNLGITLKELGQLDAAVQCYEKALAI 140

Query: 361 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 420
           +P  A+A  +LG  L   D      A K+    L    +    E  NN+G +  + G+ +
Sbjct: 141 NPDYAEAHNNLGNAL--KDLNQLDAAVKSYEKTLAINPDYA--EAHNNLGNVLKDLGQLD 196

Query: 421 SAHQSFKDALG 431
           +A + ++  L 
Sbjct: 197 AAVKCYEKTLA 207


>gi|74007670|ref|XP_849392.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Canis lupus familiaris]
          Length = 1046

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|344282024|ref|XP_003412775.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Loxodonta africana]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|260814956|ref|XP_002602179.1| hypothetical protein BRAFLDRAFT_76867 [Branchiostoma floridae]
 gi|229287486|gb|EEN58191.1| hypothetical protein BRAFLDRAFT_76867 [Branchiostoma floridae]
          Length = 1211

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 158/380 (41%), Gaps = 70/380 (18%)

Query: 119  ALLGQACVEFNRGRYSDSLEFYKRALQV----------HPSCPGAIRLG-IGLCRYKLGQ 167
            +L+       N G Y+ ++ +YK++LQ+          HP    AI L  +G+   KLG 
Sbjct: 662  SLINMGNAWLNLGDYTKAVSYYKQSLQITRRIYGEDIAHPDI--AISLNNMGIACSKLGD 719

Query: 168  LGKARQAFQRALQL----------DPENVEAL--VALAVMDLQA-NEAAGIRKGMEKMQR 214
             GKA   ++++LQ+           P+   +L  + +A  +L    +A    +   +M+R
Sbjct: 720  YGKAISYYEQSLQMRRSIYGEDTAHPDIAHSLNNMGIAWWNLGYYGKAISYYEQSLQMRR 779

Query: 215  AF----EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT-------NHGPTKSHSY 263
            +       +PY A +L+ L N +   G H       E AL +        N  P  + S 
Sbjct: 780  SIYGEDTAHPYIADSLDSLGNAWGSLGDHRKAISYYEQALQMMRSVYGEDNAHPDIAGSL 839

Query: 264  YNLARSYHSKGDYEKAGLYYMASVKEINKPH-------EFIFPYYGLGQVQLKLGDFRSA 316
            +N+  ++   GDY KA  YY  S++ I + +               LG     LGD R A
Sbjct: 840  HNMGNAWRKLGDYRKAVNYYEQSLQMIRRIYGEDTAHPNIAASLTSLGNAWGDLGDHRKA 899

Query: 317  LTNFEKVLEI----------YPDNCETLKALGHIYVQLG-------QIEKAQELLRKAAK 359
            ++ +E+ LE+          +P+   +L  LG I+  LG         E+A +++R    
Sbjct: 900  ISYYEQALEMKRSTYGKGTTHPEIARSLNNLGTIWNNLGYHRKAISYYEQALQMMRSIYG 959

Query: 360  ID---PRDAQAFIDLGELLIS-SDTGAALD----AFKTARTLLKKAGEEVPIEV-LNNIG 410
             D   P  A +  ++G    S  D   A+     A +  R++  +      I   LNN+G
Sbjct: 960  EDNAHPDIAGSLYNMGNAWGSLGDHRKAISYYEQALQMKRSIYGEGTAHPDIAASLNNLG 1019

Query: 411  VIHFEKGEFESAHQSFKDAL 430
             I    G+   A+  ++ AL
Sbjct: 1020 AIWNNLGDHRKANSYYEQAL 1039



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 35/193 (18%)

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIY------PYCAMALNYLANHFFFTGQH---- 239
           +A A+M L  ++ A +R   + +Q  + +Y      P  A +LN L   + F G H    
Sbjct: 578 LAFALMTLGDHKKA-VRYLEQTLQMRWSMYGEGTAHPDIAESLNNLGEAWSFLGDHGKAL 636

Query: 240 FLVEQLTETALAV----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------- 288
              EQ  +   ++    T H P    S  N+  ++ + GDY KA  YY  S++       
Sbjct: 637 CYFEQTLQMMRSIYGEETAH-PVILKSLINMGNAWLNLGDYTKAVSYYKQSLQITRRIYG 695

Query: 289 -EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI----------YPDNCETLKAL 337
            +I  P +       +G    KLGD+  A++ +E+ L++          +PD   +L  +
Sbjct: 696 EDIAHP-DIAISLNNMGIACSKLGDYGKAISYYEQSLQMRRSIYGEDTAHPDIAHSLNNM 754

Query: 338 GHIYVQLGQIEKA 350
           G  +  LG   KA
Sbjct: 755 GIAWWNLGYYGKA 767


>gi|89886173|ref|NP_001034837.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Sus scrofa]
 gi|122142735|sp|Q27HV0.1|OGT1_PIG RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|89114276|gb|ABD61726.1| O-linked N-acetylglucosamine transferase [Sus scrofa]
          Length = 1046

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|66347879|ref|NP_001018117.1| O-linked N-acetylglucosamine transferase isoform 4 [Danio rerio]
 gi|56967378|gb|AAW31873.1| O-GlcNAc transferase variant 4 [Danio rerio]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 195/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 344

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F    +             NLA +L+Q      A + Y+  +     +
Sbjct: 345 -------EVFPEFAAAHS-------------NLASVLQQQGKLQEALMHYKEAIRISPTF 384

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 385 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 444

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 445 ALKLKPDFPDAYCNLA 460


>gi|301791307|ref|XP_002930622.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Ailuropoda melanoleuca]
 gi|410988812|ref|XP_004000671.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Felis catus]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|406912627|gb|EKD52197.1| peptidase C14 caspase catalytic subunit P20 [uncultured bacterium]
          Length = 714

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 128/322 (39%), Gaps = 28/322 (8%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           KE   +   QYY+          S +V +G    A G+V++A  A+ I L  D  N  A 
Sbjct: 278 KEYDILTLRQYYS----------SDYVNRGYAWQAGGDVDRALDAYAIALMLDSKNEDAY 327

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
                   ++G +  ++  Y  A++  P     +    G   +K G   +A   F +AL+
Sbjct: 328 FNSGNAWSDKGNFEKAIGAYSNAIEFDPQ-NHKLYANRGKAWFKTGHFDEAISDFTQALK 386

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           +D  +           L   E     + +    +A E  P   +A       F+  G+ +
Sbjct: 387 IDEHDANTYYDRGTAWL---EKKNYEQAITDFNKAIEENPNLDIA-------FYNRGRAW 436

Query: 241 LVEQLTETAL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 296
             +Q    AL       +  P    +Y N    Y   G Y+KA +   + + EIN     
Sbjct: 437 KAKQDITKALEDYSKAIDINPIFESAYNNRGNLYLGNGFYDKA-IADFSKLIEINPSRSD 495

Query: 297 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 356
            +   GL      +G++  A+ +++K L I P N       G  +V +G+I KA +   K
Sbjct: 496 AYSNRGLAWS--GVGEYSKAIEDYDKALLIEPSNIHAYVNRGVAWVHMGEIHKAFDDYNK 553

Query: 357 AAKIDPRDAQAFIDLGELLISS 378
           A +I+P  + A+ +   L + +
Sbjct: 554 ALQINPNFSHAYANRANLFLQT 575


>gi|301791309|ref|XP_002930623.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Ailuropoda melanoleuca]
 gi|410988810|ref|XP_004000670.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Felis catus]
 gi|355708635|gb|AES03331.1| O-linked N-acetylglucosamine transferase [Mustela putorius furo]
          Length = 1046

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|32307150|ref|NP_858059.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 2 [Homo sapiens]
 gi|397498836|ref|XP_003820180.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Pan paniscus]
 gi|426396358|ref|XP_004064414.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Gorilla gorilla gorilla]
 gi|15680175|gb|AAH14434.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Homo sapiens]
 gi|18250914|emb|CAC86127.1| UDP-N-acatylglucosamine: polypeptide-N-acetylglucosaminyl
           transferase [Homo sapiens]
 gi|119625692|gb|EAX05287.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_c [Homo
           sapiens]
 gi|123993895|gb|ABM84549.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [synthetic construct]
 gi|124000677|gb|ABM87847.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [synthetic construct]
 gi|224487755|dbj|BAH24112.1| O-linked N-acetylglucosamine (GlcNAc) transferase [synthetic
           construct]
 gi|410227762|gb|JAA11100.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
 gi|410257114|gb|JAA16524.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|209528249|ref|ZP_03276714.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209491321|gb|EDZ91711.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 915

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 10/273 (3%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G++  A SA+    E   +   +    A +  N G + +++ FY++A+ + P+    +  
Sbjct: 51  GQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLSPNW-ADLHY 109

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G   +  G +  A   +++A+ L+P+  +A +    M L+ NE   I   ++ +Q+  
Sbjct: 110 HLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLD---MGLRLNERGDIDTAIKVLQQGG 166

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
              P      N L    +   Q   +++         N  PT+   Y NL  ++  +G  
Sbjct: 167 INCPNFKEIFNTLG---YLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLGWAWTYQGKL 223

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            +A   Y    K I+   +    Y  LG++  +  + R A++ F+K + I PDN      
Sbjct: 224 SEAIAAYQ---KAISLKPDLAIAYSNLGKLWQQKNNHRQAISYFQKAIAIEPDNIMFYSD 280

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
            G   + +G + +A    +KA  IDP+  Q +I
Sbjct: 281 CGSSCLIIGWLSQAMACFQKAIAIDPKFVQGYI 313



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFI----FPYYGLGQVQLKLGDFRSALTNF 320
           N A +Y   G+  +     MA++    K  E        Y  L Q+   +G F  A++ +
Sbjct: 35  NCAIAYQLLGNIHEDYGQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFY 94

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
           ++ +++ P+  +    LG      G IE A     KA  ++P+  QA++D+G  L  ++ 
Sbjct: 95  QQAIDLSPNWADLHYHLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLDMGLRL--NER 152

Query: 381 GAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           G       TA  +L++ G   P   E+ N +G +  ++ + + A   F++AL
Sbjct: 153 G----DIDTAIKVLQQGGINCPNFKEIFNTLGYLQLQQNQIDEAIAIFQEAL 200



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 20/175 (11%)

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +   M    +AFE+ P  A++  YLA  +   G         + A+ ++   P  +  +Y
Sbjct: 53  LMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLS---PNWADLHY 109

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG---DFRSALTNFE 321
           +L  + H +G+ E A   Y  ++    K          LGQ  L +G   + R  +    
Sbjct: 110 HLGSALHWQGNIEGAIGCYEKAIALNPK----------LGQAYLDMGLRLNERGDIDTAI 159

Query: 322 KVLEIYPDNC----ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           KVL+    NC    E    LG++ +Q  QI++A  + ++A  IDP +   + +LG
Sbjct: 160 KVLQQGGINCPNFKEIFNTLGYLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLG 214


>gi|406952433|gb|EKD82044.1| hypothetical protein ACD_39C01506G0001, partial [uncultured
           bacterium]
          Length = 994

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 143/357 (40%), Gaps = 16/357 (4%)

Query: 74  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 133
           KAS++D      +   G +   + E + A   FK  LE   D V        +  +   +
Sbjct: 608 KASQLDPENAVIYYELGDVYYQRDEYQDALVKFKRALELQDDYVDVYQKLGTIHSSMEHW 667

Query: 134 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
            ++ +F+++A+++        R  +G    KLG +  A  +F++AL+  P ++  +  L 
Sbjct: 668 KEAKQFFEKAIELEAENYSIYR-ELGEACEKLGDVEGAISSFEKALEFKPGDLNIIYRLG 726

Query: 194 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
               Q N    +   +    +A E  P  A+    L   +   GQ        E AL + 
Sbjct: 727 AQYKQNNNFNAM---VVLYSKAVEAAPKNALFYFELGEAYRGLGQQNEAASNFEQALTLN 783

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
                     Y L   +     YEK    Y    K IN+       ++ LG+   +L   
Sbjct: 784 E---NLIECIYALGGIFWENQHYEKMVRLYK---KAINRYPTNSRAHFELGKAYYRLLKI 837

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
             A+  F+KV+ +  ++ E    LG +Y+  G + +  E L KA  I P + +A   LG+
Sbjct: 838 GDAIDEFKKVINLDSNHQEVYFELGRLYIDNGMLSEGAETLEKAVAITPENGEAHFLLGK 897

Query: 374 LLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
                +D   A  +FK A+  +     E   EVL  +G  + E+  +E A Q    A
Sbjct: 898 AYEGLNDKSKATQSFKKAQGQM-----EENYEVLLKVGADYLERESYEEALQQLTKA 949



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 156/374 (41%), Gaps = 22/374 (5%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K+ +  +A + +N+A +ID   P          + KG V++A   FK  L  +  N+   
Sbjct: 459 KQGNLDMAIERFNRAIQIDGSNPLPHRELAMAYINKGRVDKAIGEFKEALNYEPSNIVVN 518

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           +  A    ++G   D+++ Y++ + + P    A    +G+     G    A   F+  + 
Sbjct: 519 IELAKAYASQGIIDDAVDSYRKVIGLDPRNSNA-HFELGIIYSTQGLNDNAISEFKTVIG 577

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L P++  A + L        +   + + ++++++A ++ P  A+    L + ++   ++ 
Sbjct: 578 LSPDHKRAHLELG---RHLRDTGRVDEAIDELRKASQLDPENAVIYYELGDVYYQRDEY- 633

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLAR---SYHSKGDYEKAGLYYMASVKEINKPHEFI 297
                 + AL            Y ++ +   + HS  ++ K    +     E+   +  I
Sbjct: 634 ------QDALVKFKRALELQDDYVDVYQKLGTIHSSMEHWKEAKQFFEKAIELEAENYSI 687

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             Y  LG+   KLGD   A+++FEK LE  P +   +  LG  Y Q         L  KA
Sbjct: 688 --YRELGEACEKLGDVEGAISSFEKALEFKPGDLNIIYRLGAQYKQNNNFNAMVVLYSKA 745

Query: 358 AKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 416
            +  P++A  + +LGE          A   F+ A TL      E  IE +  +G I +E 
Sbjct: 746 VEAAPKNALFYFELGEAYRGLGQQNEAASNFEQALTL-----NENLIECIYALGGIFWEN 800

Query: 417 GEFESAHQSFKDAL 430
             +E   + +K A+
Sbjct: 801 QHYEKMVRLYKKAI 814



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 17/282 (6%)

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
           ++A +A   V++ + +   A L    +  +      S+E YK A+++    P A  + + 
Sbjct: 226 DKALNALHTVVDIEPEIFEAHLELGRIYHHHNALEKSVESYKSAIRIRAEAPQA-HVELA 284

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 219
                + +  +A + ++ AL++DP   EAL  L   DL  N +          +R  E+ 
Sbjct: 285 EVYLAMEKSARAIEEYKLALEIDPSLAEALANLG--DLY-NMSEQYELAGNCYRRLVEMD 341

Query: 220 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 279
           P    A   LA   +  GQ   +E+  +  L V      ++ +   L + Y S   +E A
Sbjct: 342 PQNHSARFRLAETCYHCGQ---LEKALDEYLKVAEINEERTDALIRLGKIYASLEKWEDA 398

Query: 280 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 339
             YY+  V E +  +  I  +  LG+V   L     AL  FE  LE  P+N E L  +G 
Sbjct: 399 AKYYV-RVFETDPQNSLI--HLELGKVYDHLNRLTDALREFEAALEREPNNPEILTQIGL 455

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRD-------AQAFIDLGEL 374
           ++ + G ++ A E   +A +ID  +       A A+I+ G +
Sbjct: 456 MHRKQGNLDMAIERFNRAIQIDGSNPLPHRELAMAYINKGRV 497



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 135/660 (20%), Positives = 251/660 (38%), Gaps = 96/660 (14%)

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQAN--EAAGIRKGMEKMQRAFEIYPYCAMALN 227
           KA    ++A++LD +  EA  A+  +  + N  E A IR     + R  E+ P    A  
Sbjct: 23  KALANLRKAVELDIDYTEAHFAIGRISFEENQDETARIR-----LTRTIELAPAHDQAHY 77

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
           YL       G++        +A+A++   P  S   ++LA  Y   G++++A        
Sbjct: 78  YLGLLHHRNGRYQQAIDEFNSAIALS---PKPSRIQFDLAMLYADSGNWQEAK---TILE 131

Query: 288 KEINKPHEFI--FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
           K +   H+FI     Y +    L++   + A   + + +E+ P+     + L  +Y    
Sbjct: 132 KVLEHEHDFIDAIIQYAITLEHLEM--LKEAEEEYLRAIELQPEGLRAHENLARLYESTN 189

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIE 404
           QI KA++  RK  +I P    A + L ++ I  D    AL+A  T   +     E    E
Sbjct: 190 QIYKAEDEFRKVVEIKPNHVAAQMSLAKIYIIRDLHDKALNALHTVVDI-----EPEIFE 244

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 464
               +G I+      E + +S+K A+                 I A A     +  +++ 
Sbjct: 245 AHLELGRIYHHHNALEKSVESYKSAIR----------------IRAEAPQAHVELAEVYL 288

Query: 465 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD-------AY 517
             E     +E     + +  +LA  L  + D    S  Y L    Y+  V+       A 
Sbjct: 289 AMEKSARAIEEYKLALEIDPSLAEALANLGDLYNMSEQYELAGNCYRRLVEMDPQNHSAR 348

Query: 518 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA 577
            RLA        L+ +++   +  ++N +  +AL  LG +    + W  A + +    + 
Sbjct: 349 FRLAETCYHCGQLEKALDEYLKVAEINEERTDALIRLGKIYASLEKWEDAAKYYVRVFE- 407

Query: 578 TDGKDSYATLSLGN-WNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 636
           TD ++S   L LG  +++   L +  R  +          E+ T++              
Sbjct: 408 TDPQNSLIHLELGKVYDHLNRLTDALREFEAALEREPNNPEILTQI-------------- 453

Query: 637 GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
           G++  ++G  D++ + F +  +    +     P     LA  Y  +G    A+  ++  L
Sbjct: 454 GLMHRKQGNLDMAIERFNRAIQIDGSN-----PLPHRELAMAYINKGRVDKAIGEFKEAL 508

Query: 697 RKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST 756
              Y  ++  + + LA+ +       D   S  + I L P N    F+ G+         
Sbjct: 509 N--YEPSNIVVNIELAKAYASQGIIDDAVDSYRKVIGLDPRNSNAHFELGI--------- 557

Query: 757 LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKI 816
                     + ST    +NA+  F  +   S       D K+   H+E  +HL D  ++
Sbjct: 558 ----------IYSTQGLNDNAISEFKTVIGLSP------DHKR--AHLELGRHLRDTGRV 599



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 100/459 (21%), Positives = 173/459 (37%), Gaps = 58/459 (12%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           YY LG+V   + +   AL N  K +E+  D  E   A+G I  +  Q E A+  L +  +
Sbjct: 8   YYELGRVYQDINENEKALANLRKAVELDIDYTEAHFAIGRISFEENQDETARIRLTRTIE 67

Query: 360 IDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 416
           + P   QA   LG  L+    G    A+D F +A  L  K     P  +  ++ +++ + 
Sbjct: 68  LAPAHDQAHYYLG--LLHHRNGRYQQAIDEFNSAIALSPK-----PSRIQFDLAMLYADS 120

Query: 417 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 476
           G ++ A    +  L        +D+  +  +      ML+  + +           +EL 
Sbjct: 121 GNWQEAKTILEKVLEHE--HDFIDAIIQYAITLEHLEMLKEAEEEYLRA-------IELQ 171

Query: 477 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 536
              +    NLARL E  +    A   +R ++    ++V A + LA I   R+        
Sbjct: 172 PEGLRAHENLARLYESTNQIYKAEDEFRKVVEIKPNHVAAQMSLAKIYIIRD-------- 223

Query: 537 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFA 596
                 ++ K  NAL  + D+E          E F A  +       +  L     +Y +
Sbjct: 224 ------LHDKALNALHTVVDIE---------PEIFEAHLELGRIYHHHNALEKSVESYKS 268

Query: 597 ALRNEKRAPK--LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG-------QFD 647
           A+R    AP+  +E   +  A E   R I ++   L         LA  G       Q++
Sbjct: 269 AIRIRAEAPQAHVELAEVYLAMEKSARAIEEYKLALEIDPSLAEALANLGDLYNMSEQYE 328

Query: 648 VSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQI 707
           ++ + + ++ E        Q       LA   +  G    A+  Y          TDA  
Sbjct: 329 LAGNCYRRLVEMDP-----QNHSARFRLAETCYHCGQLEKALDEYLKVAEINEERTDA-- 381

Query: 708 LLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAG 746
           L+ L + +   E+W+D  K  +R     P N  +  + G
Sbjct: 382 LIRLGKIYASLEKWEDAAKYYVRVFETDPQNSLIHLELG 420



 Score = 46.2 bits (108), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 128/330 (38%), Gaps = 24/330 (7%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG I +      EH+  A Q++ KA  ++    S +   G+     G+VE A S+F+
Sbjct: 654 YQKLGTIHSSM----EHWKEAKQFFEKAIELEAENYSIYRELGEACEKLGDVEGAISSFE 709

Query: 108 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             LE    ++  +            ++  +  Y +A++  P         +G     LGQ
Sbjct: 710 KALEFKPGDLNIIYRLGAQYKQNNNFNAMVVLYSKAVEAAPKN-ALFYFELGEAYRGLGQ 768

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
             +A   F++AL L+   +E + AL  +     E     K +   ++A   YP  + A  
Sbjct: 769 QNEAASNFEQALTLNENLIECIYALGGIFW---ENQHYEKMVRLYKKAINRYPTNSRA-- 823

Query: 228 YLANHFFFTGQHFLVEQLTETA---LAVTNHGPTKSHSYYNLARSYHSKGDYEKAG--LY 282
               HF     ++ + ++ +       V N        Y+ L R Y   G   +    L 
Sbjct: 824 ----HFELGKAYYRLLKIGDAIDEFKKVINLDSNHQEVYFELGRLYIDNGMLSEGAETLE 879

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
              ++   N    F+     LG+    L D   A  +F+K      +N E L  +G  Y+
Sbjct: 880 KAVAITPENGEAHFL-----LGKAYEGLNDKSKATQSFKKAQGQMEENYEVLLKVGADYL 934

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           +    E+A + L KAAK     +  +  LG
Sbjct: 935 ERESYEEALQQLTKAAKFAEAGSMVYYLLG 964



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 101/506 (19%), Positives = 209/506 (41%), Gaps = 59/506 (11%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASV-KEINKPHEFIFPYYGLGQVQLKLGDFRS 315
           P  +  YY L R Y    + EKA    +A++ K +    ++   ++ +G++  +     +
Sbjct: 2   PNFAQGYYELGRVYQDINENEKA----LANLRKAVELDIDYTEAHFAIGRISFEENQDET 57

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           A     + +E+ P + +    LG ++ + G+ ++A +    A  + P+ ++   DL   +
Sbjct: 58  ARIRLTRTIELAPAHDQAHYYLGLLHHRNGRYQQAIDEFNSAIALSPKPSRIQFDLA--M 115

Query: 376 ISSDTGAALDAFKTARTLLKKAGEE----VPIEVLNNIGVIHFEKGEFESAHQSFKDALG 431
           + +D+G     ++ A+T+L+K  E     +   +   I + H E           K+A  
Sbjct: 116 LYADSG----NWQEAKTILEKVLEHEHDFIDAIIQYAITLEHLE---------MLKEAEE 162

Query: 432 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR--L 489
           +  +L  ++ + +      + + L     Q++   +     VE+  N V    +LA+  +
Sbjct: 163 E--YLRAIELQPEGLRAHENLARLYESTNQIYKAEDEFRKVVEIKPNHVAAQMSLAKIYI 220

Query: 490 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 549
           +  +HD  A + L+ ++  +  +  +A+L L  I    N L+ S+E    A+++  + P 
Sbjct: 221 IRDLHDK-ALNALHTVVDIE-PEIFEAHLELGRIYHHHNALEKSVESYKSAIRIRAEAPQ 278

Query: 550 ALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGN-WNYFAALRNEKRAPKLE 608
           A   L ++ L  +   +A E ++ A +  D   + A  +LG+ +N               
Sbjct: 279 AHVELAEVYLAMEKSARAIEEYKLALE-IDPSLAEALANLGDLYNM-------------- 323

Query: 609 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQM 668
           +   E A   Y R++     N  A           GQ + + D + +V E     +  + 
Sbjct: 324 SEQYELAGNCYRRLVEMDPQNHSARFRLAETCYHCGQLEKALDEYLKVAE-----INEER 378

Query: 669 PDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ---ILLYLARTHYEAEQWQDCK 725
            D  I L  +Y +   +  A K Y   +R F   TD Q   I L L + +    +  D  
Sbjct: 379 TDALIRLGKIYASLEKWEDAAKYY---VRVF--ETDPQNSLIHLELGKVYDHLNRLTDAL 433

Query: 726 KSLLRAIHLAPSNYTLRFDAGVAMQK 751
           +    A+   P+N  +    G+  +K
Sbjct: 434 REFEAALEREPNNPEILTQIGLMHRK 459


>gi|149758509|ref|XP_001493422.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Equus caballus]
 gi|291407677|ref|XP_002720149.1| PREDICTED: O-linked GlcNAc transferase isoform 2 [Oryctolagus
           cuniculus]
 gi|296235743|ref|XP_002763023.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Callithrix jacchus]
 gi|348570518|ref|XP_003471044.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Cavia porcellus]
 gi|402910496|ref|XP_003917911.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Papio anubis]
 gi|426257214|ref|XP_004022227.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Ovis aries]
 gi|378405191|sp|P81436.2|OGT1_RABIT RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|355757457|gb|EHH60982.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Macaca fascicularis]
 gi|380817296|gb|AFE80522.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 1 [Macaca mulatta]
 gi|383422239|gb|AFH34333.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 1 [Macaca mulatta]
 gi|384949880|gb|AFI38545.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 1 [Macaca mulatta]
          Length = 1046

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|403305183|ref|XP_003943149.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Saimiri boliviensis boliviensis]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|195122698|ref|XP_002005848.1| GI18858 [Drosophila mojavensis]
 gi|193910916|gb|EDW09783.1| GI18858 [Drosophila mojavensis]
          Length = 1052

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 165/388 (42%), Gaps = 28/388 (7%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 113 YSNLGNVYKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYI 168

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG-AIRLGIGLCRYK 164
             L+ + D   V + LG        GR  ++   Y +A++   +CPG A+      C + 
Sbjct: 169 TALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIE---TCPGFAVAWSNLGCVFN 223

Query: 165 L-GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
             G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A
Sbjct: 224 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNA 280

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
           +    LA  ++  G   L++   +T        P    +Y NLA +   KG  + A   Y
Sbjct: 281 VVHGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKDAEECY 337

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q
Sbjct: 338 NTALRLCSNHADSL---NNLANIKREQGFIEEATRLYLKALEVFPDFAAAHSNLASVLQQ 394

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP 402
            G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +         
Sbjct: 395 QGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA---- 450

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +  +N+  IH + G    A QS++ AL
Sbjct: 451 -DAHSNLASIHKDSGNIPEAIQSYRTAL 477



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 100/454 (22%), Positives = 186/454 (40%), Gaps = 27/454 (5%)

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
           D  N   LL  + + F   R   S +F   A++ +P    A    +G    + GQL +A 
Sbjct: 72  DSTNTGVLLLLSSIHFQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVYKERGQLQEAL 130

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--YCAMALNYLA 230
             ++RA++L P+ ++  + LA   + A +   +   ++    A +  P  YC  +   L 
Sbjct: 131 DNYRRAVRLKPDFIDGYINLAAALVAARD---MESAVQAYITALQYNPDLYCVRS--DLG 185

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
           N     G+   +E+     L      P  + ++ NL   ++++G+   A  ++    K +
Sbjct: 186 NLLKALGR---LEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFE---KAV 239

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
                F+  Y  LG V  +   F  A+  + + L + P+N      L  +Y + G I+ A
Sbjct: 240 TLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLA 299

Query: 351 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 410
            +  R+A ++ P    A+ +L   L   + G   DA +   T L+        + LNN+ 
Sbjct: 300 IDTYRRAIELQPNFPDAYCNLANAL--KEKGQVKDAEECYNTALRLCSNHA--DSLNNLA 355

Query: 411 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 470
            I  E+G  E A + +  AL   ++     + +        AS+LQ +  +L     +  
Sbjct: 356 NIKREQGFIEEATRLYLKAL--EVFPDFAAAHSNL------ASVLQ-QQGKLKEALMHYK 406

Query: 471 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 530
             + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N+
Sbjct: 407 EAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNI 466

Query: 531 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
             +I+    ALK+   +P+A   L        DW
Sbjct: 467 PEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDW 500



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 48/338 (14%)

Query: 38  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
           I       V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L    
Sbjct: 205 IETCPGFAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 260

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
             ++A +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    
Sbjct: 261 IFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAY-CN 319

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +     + GQ+  A + +  AL+L   + ++L  LA +     E   I +      +A E
Sbjct: 320 LANALKEKGQVKDAEECYNTALRLCSNHADSLNNLANIK---REQGFIEEATRLYLKALE 376

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           ++P  A A                                   HS  NLA     +G  +
Sbjct: 377 VFPDFAAA-----------------------------------HS--NLASVLQQQGKLK 399

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A ++Y  +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L
Sbjct: 400 EALMHYKEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNL 456

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
             I+   G I +A +  R A K+ P    A+ +L   L
Sbjct: 457 ASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 494


>gi|126342737|ref|XP_001362233.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Monodelphis domestica]
          Length = 1045

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|147899141|ref|NP_001091539.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Bos taurus]
 gi|146186901|gb|AAI40543.1| OGT protein [Bos taurus]
 gi|296470806|tpg|DAA12921.1| TPA: O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Bos taurus]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|149758511|ref|XP_001493438.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Equus caballus]
 gi|291407675|ref|XP_002720148.1| PREDICTED: O-linked GlcNAc transferase isoform 1 [Oryctolagus
           cuniculus]
 gi|296235745|ref|XP_002763024.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Callithrix jacchus]
 gi|348570516|ref|XP_003471043.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Cavia porcellus]
 gi|402910498|ref|XP_003917912.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Papio anubis]
 gi|426257212|ref|XP_004022226.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Ovis aries]
 gi|380817298|gb|AFE80523.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 2 [Macaca mulatta]
 gi|383422241|gb|AFH34334.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 2 [Macaca mulatta]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|74007686|ref|XP_538075.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Canis lupus familiaris]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|395858891|ref|XP_003801788.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Otolemur garnettii]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|428320933|ref|YP_007118815.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244613|gb|AFZ10399.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 471

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 99/458 (21%), Positives = 179/458 (39%), Gaps = 52/458 (11%)

Query: 140 YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 199
           Y RA+++ P    A     G  RY LG    A   F +A++L P+  EA     +   + 
Sbjct: 32  YNRAIELQPDDALAY-YNRGNVRYNLGDKKGAIADFNKAIELQPDLAEAYGNRGLFRSEL 90

Query: 200 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG--- 256
            +  G    +  + +A E+ P  A+A         +  +  +  +L +   A+ ++    
Sbjct: 91  GDKKG---AIADLNKAIELQPDLALA---------YVNRGAVRSKLGDKKGAIADYNKAI 138

Query: 257 ---PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 313
              P  + +YYN        GD + A   Y  +++   KP +    YY  G V+ +LGD 
Sbjct: 139 ELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIEL--KP-DLALAYYNRGLVRSELGDK 195

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
           + A+ ++ K +E+ PD  +     G +  +LG  + A   L K  ++ P  AQA+ + G 
Sbjct: 196 KGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRG- 254

Query: 374 LLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL- 430
            L  S+ G      K A     KA E  P   +     G + +  G+ + A   F  A+ 
Sbjct: 255 -LFRSELGDK----KGAIADFNKAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIE 309

Query: 431 --GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 488
              D  +        +  + D   ++  +               +EL  +     FN   
Sbjct: 310 LQPDDAFAYYNRGNVRYILGDKKGAIADYN------------KAIELKPDDAQAYFNRGN 357

Query: 489 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 548
           +  ++ D       Y  ++    DY DAY+    +     + + +I  +N+A+++   Y 
Sbjct: 358 VRSELGDKKGEIADYNKVIELQPDYADAYINRGLVRYDLGDKKGAIADLNKAIELQPDYA 417

Query: 549 -------NALSMLGDLELKNDDWVKAKETFRAASDATD 579
                  N    LGD +   +D  KA + F+A     D
Sbjct: 418 FAYGNRGNVRYNLGDKKGAIEDLQKAAQLFKAQGQMAD 455



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 145/369 (39%), Gaps = 38/369 (10%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           NKA  +       +V +G +    G+ + A + +   +E   D   A   +  V    G 
Sbjct: 101 NKAIELQPDLALAYVNRGAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGD 160

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 192
              ++  Y +A+++ P    A     GL R +LG    A   + +A++L P+  +A    
Sbjct: 161 KKGAIADYNKAIELKPDLALAY-YNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNR 219

Query: 193 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 252
             +  +  +  G    +  + +  E+ P  A A         +  +     +L +   A+
Sbjct: 220 GTVRSELGDKKG---AIADLNKVIELKPDLAQA---------YYNRGLFRSELGDKKGAI 267

Query: 253 TNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYYG 302
            +        P  + +YY      +  GD + A       + + NK  E      F YY 
Sbjct: 268 ADFNKAIELQPDDAQAYYKRGNVRYILGDKKGA-------ITDFNKAIELQPDDAFAYYN 320

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G V+  LGD + A+ ++ K +E+ PD+ +     G++  +LG  +       K  ++ P
Sbjct: 321 RGNVRYILGDKKGAIADYNKAIELKPDDAQAYFNRGNVRSELGDKKGEIADYNKVIELQP 380

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFE 420
             A A+I+ G  L+  D G      K A   L KA E  P       N G + +  G+ +
Sbjct: 381 DYADAYINRG--LVRYDLGDK----KGAIADLNKAIELQPDYAFAYGNRGNVRYNLGDKK 434

Query: 421 SAHQSFKDA 429
            A +  + A
Sbjct: 435 GAIEDLQKA 443



 Score = 46.6 bits (109), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 116/294 (39%), Gaps = 20/294 (6%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YNKA  +       +  +G +    G+ + A + +   +E   D   A   +  V    G
Sbjct: 168 YNKAIELKPDLALAYYNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNRGTVRSELG 227

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               ++    + +++ P    A     GL R +LG    A   F +A++L P++ +A   
Sbjct: 228 DKKGAIADLNKVIELKPDLAQAY-YNRGLFRSELGDKKGAIADFNKAIELQPDDAQAYYK 286

Query: 192 LAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
                       G +KG +    +A E+ P  A A     N  +  G         + A+
Sbjct: 287 RG----NVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRYILGDK-------KGAI 335

Query: 251 AVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           A  N      P  + +Y+N        GD +K  +     V E+    ++   Y   G V
Sbjct: 336 ADYNKAIELKPDDAQAYFNRGNVRSELGD-KKGEIADYNKVIELQ--PDYADAYINRGLV 392

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
           +  LGD + A+ +  K +E+ PD        G++   LG  + A E L+KAA++
Sbjct: 393 RYDLGDKKGAIADLNKAIELQPDYAFAYGNRGNVRYNLGDKKGAIEDLQKAAQL 446


>gi|19705092|ref|NP_602587.1| hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19713016|gb|AAL93886.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 628

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 24/291 (8%)

Query: 88  GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH 147
           G    LL K   E+A + +   +E + +N      +AC  +   +Y  ++E Y +A++++
Sbjct: 34  GLSYFLLKK--YEEAINDYNRAIELNLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLN 91

Query: 148 PS--CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 205
           P+  C    R   G   + L +  +A + + +A++LDP N              N+    
Sbjct: 92  PNDACYFNNR---GHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNK---Y 145

Query: 206 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSH 261
            K +E   +A ++ P  A        +F   G  +  E+    ++   N      P  + 
Sbjct: 146 DKAIEDYNKAIKLDPNNAA-------YFSSRGDIYYYEKAYNKSIEDYNKAIKLDPNNAF 198

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
            Y N   +Y     Y++A   Y  ++K +N  + F    Y  G    KL  ++ A+ +++
Sbjct: 199 YYDNRGLAYEKLKKYKEAINDYNKAIK-LNPNNAFYC--YNRGFTYNKLKKYKEAINDYD 255

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           K +++ P+N       G  Y  LG+  KA E   KA K++P    A+ + G
Sbjct: 256 KAIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYTFAYNNKG 306



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%)

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 322
           YYN A SY+    Y+KA   Y  ++K    P++  + +   G     L  +  A+ +++K
Sbjct: 64  YYNRACSYYCSNKYDKAIEDYDKAIKL--NPNDACY-FNNRGHSYFALNKYSEAIEDYDK 120

Query: 323 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            +++ P+N       G  Y  L + +KA E   KA K+DP +A  F   G++
Sbjct: 121 AIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDI 172


>gi|403305181|ref|XP_003943148.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Saimiri boliviensis boliviensis]
          Length = 1046

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|149042178|gb|EDL95885.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Rattus
           norvegicus]
 gi|149042179|gb|EDL95886.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Rattus
           norvegicus]
          Length = 1046

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|139948535|ref|NP_058803.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Rattus norvegicus]
 gi|149042180|gb|EDL95887.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Rattus
           norvegicus]
 gi|149042181|gb|EDL95888.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Rattus
           norvegicus]
          Length = 1036

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|189527635|ref|XP_001921570.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Danio rerio]
          Length = 1045

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 103/479 (21%), Positives = 187/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S +F   A + +P    A   
Sbjct: 34  GDFEAAEHHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDMSFQFSTLATKQNPMLAEAYS- 92

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + +++AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 93  NLGNVHKERGQLQEAIERYRQALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 149

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
              P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 150 HCNPDLYCVRS--DLGNLLKALGR---LEEAKRCYLKAIETQPNFAVAWSNLGCVFNAQG 204

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 205 EIWLAIHHFE---KAVTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 261

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R A ++ P    A+ +L   +    +   A + + TA  L
Sbjct: 262 GNLACVYYEQGLIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALRL 321

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL       +       +   AS  
Sbjct: 322 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL------EVFPDFAAAHSNLASVL 370

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    +E     + +         N+   L+++ D   A   Y   +     +
Sbjct: 371 QQQGKLQEALMHYEEA---IRISPTFADAYSNMGNTLKEMQDIQGALRCYTRAIQINPAF 427

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 428 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 486



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A + Y +A R+       ++     L+A G++E A  A+ 
Sbjct: 91  YSNLGNVHKERGQLQE----AIERYRQALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 146

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L  + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 147 SALHCNPDLYCVRSDLGNLLKAL--GRLEEAKRCYLKAIETQPNFAVAWS-NLGCVFNAQ 203

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LD   ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 204 GEIWLAIHHFEKAVTLDASFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 260

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   K +  +A   Y  
Sbjct: 261 HGNLACVYYEQGLIDLAIDTYRHAIELQPHFPD---AYCNLANAMKEKCNVSEAEECYNT 317

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++PD       L  +
Sbjct: 318 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLASV 369

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A     +A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 370 LQQQGKLQEALMHYEEAIRISPTFADAYSNMGNTLKEMQDIQGALRCYTRAIQINPAFA- 428

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 429 ----DAHSNLASIHKDSGNIPEAIASYRTAL 455


>gi|395858889|ref|XP_003801787.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Otolemur garnettii]
          Length = 1046

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|344282022|ref|XP_003412774.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Loxodonta africana]
          Length = 1046

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|300864445|ref|ZP_07109316.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
 gi|300337589|emb|CBN54464.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
          Length = 1129

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 137/304 (45%), Gaps = 16/304 (5%)

Query: 94  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
           L +G   +A ++ ++ L+   D + A +        +G+   ++  Y++AL+  P+    
Sbjct: 328 LLQGNFREAIASCQLALKIRPDFIQAYVTLGNALQGQGKMDAAIRAYEQALEFEPNY-AE 386

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKM 212
           +R  IG   +K+G L KA   +Q+A+ L P+       L  V   Q   A  I       
Sbjct: 387 VRANIGSMYFKMGHLEKAIVYYQQAIALKPDLAGVYWNLGKVFQKQGKSAEAI----AYF 442

Query: 213 QRAFEIYPYCAMA---LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
           Q+  +I P+   A    N LAN     G+     Q  + A+AV    P  + +Y N+  +
Sbjct: 443 QKTSDINPHVVGADFHFN-LANTLLTEGKRDEAIQSYQRAIAVK---PDWAEAYANIGSA 498

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
              +G+ E+A  YY  ++  I    E +  ++ +    L  G +  A++N+++ ++  PD
Sbjct: 499 RMQQGNLEEAIQYYRKAIA-IKPQLEAL--HFNIANALLHQGKYEEAISNYQEAIKHKPD 555

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
             + +  +G+ +   G++E+A    ++A    P  A+ +  +G +      G ++  F+ 
Sbjct: 556 WPDAIANMGNAFSMQGKLEEAIATYQQALVYKPDWAEVYCRMGHIQKQDRPGESIGYFEK 615

Query: 390 ARTL 393
           A  L
Sbjct: 616 AIEL 619



 Score = 46.2 bits (108), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 116/570 (20%), Positives = 215/570 (37%), Gaps = 103/570 (18%)

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           +E   +A   Y++A  ID +        G +    G +++A+++++  L  + +    LL
Sbjct: 93  QEQLEMAIHAYSQALEIDPNFAEAHANLGSMYYKLGRLDEAANSYQKALANNPNLASVLL 152

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR--YKLGQ-------LGKAR 172
               +   +     ++  Y+++L + P          GL R  YKL +       +  A 
Sbjct: 153 MLGNILQQQEDLGAAIACYQKSLVLQP----------GLLRNYYKLAEALTKSNNVDAAI 202

Query: 173 QAFQRALQLDPENVEALVALAVMD-LQANEAAGIRKGMEKMQRAF--------------- 216
             +Q+ LQL P + EA   L+ +  L++ E        E  +  F               
Sbjct: 203 SCYQKVLQLQPGDAEATDKLSSLQQLKSQEEPKNSPNDEGTKGQFLELEKEGEWQQQEPI 262

Query: 217 ---EIYPYCAMALNYLANHFFFTGQHFLVEQLTETA------LAVTNHGPTKS------- 260
              E Y     +LN        T Q   +++  ETA      ++  N  P +        
Sbjct: 263 KQDEEYGLQPSSLNLPQ-----TTQDLSLDRPFETADETAEQVSSFNFNPPEQVAKFQEV 317

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
             Y   A +Y  +G++ +A    +AS +  +    +FI  Y  LG      G   +A+  
Sbjct: 318 EEYKKRAEAYLLQGNFREA----IASCQLALKIRPDFIQAYVTLGNALQGQGKMDAAIRA 373

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL---- 375
           +E+ LE  P+  E    +G +Y ++G +EKA    ++A  + P  A  + +LG++     
Sbjct: 374 YEQALEFEPNYAEVRANIGSMYFKMGHLEKAIVYYQQAIALKPDLAGVYWNLGKVFQKQG 433

Query: 376 --------------ISSDTGAALDAFKTARTLLKKAGEEVPI--------------EVLN 407
                         I+     A   F  A TLL +   +  I              E   
Sbjct: 434 KSAEAIAYFQKTSDINPHVVGADFHFNLANTLLTEGKRDEAIQSYQRAIAVKPDWAEAYA 493

Query: 408 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 467
           NIG    ++G  E A Q ++ A+     L  L          A+A + Q K  +    ++
Sbjct: 494 NIGSARMQQGNLEEAIQYYRKAIAIKPQLEALHFNI------ANALLHQGKYEEAISNYQ 547

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
               H     + +  + N   +  ++ + +A    Y+  L    D+ + Y R+  I K +
Sbjct: 548 EAIKHKPDWPDAIANMGNAFSMQGKLEEAIAT---YQQALVYKPDWAEVYCRMGHIQK-Q 603

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDL 557
           +    SI    +A+++N  +  A   L DL
Sbjct: 604 DRPGESIGYFEKAIELNPYFSEAHQQLCDL 633



 Score = 43.1 bits (100), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 2/133 (1%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y KA   ++ +        ++ + KG+++ A ++ K  L+   D  PA L       ++ 
Sbjct: 35  YQKAISFNVEDAEIHRKLAEVYILKGQLDSAIASCKFALKVKPDFAPAYLTMGNAFHSQE 94

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           +   ++  Y +AL++ P+   A    +G   YKLG+L +A  ++Q+AL  +P     L+ 
Sbjct: 95  QLEMAIHAYSQALEIDPNFAEA-HANLGSMYYKLGRLDEAANSYQKALANNPNLASVLLM 153

Query: 192 LAVMDLQANEAAG 204
           L  + LQ  E  G
Sbjct: 154 LGNI-LQQQEDLG 165



 Score = 40.4 bits (93), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 6/130 (4%)

Query: 266 LARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
           LA  Y  KG  + A    +AS K  +    +F   Y  +G           A+  + + L
Sbjct: 52  LAEVYILKGQLDSA----IASCKFALKVKPDFAPAYLTMGNAFHSQEQLEMAIHAYSQAL 107

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS-DTGAA 383
           EI P+  E    LG +Y +LG++++A    +KA   +P  A   + LG +L    D GAA
Sbjct: 108 EIDPNFAEAHANLGSMYYKLGRLDEAANSYQKALANNPNLASVLLMLGNILQQQEDLGAA 167

Query: 384 LDAFKTARTL 393
           +  ++ +  L
Sbjct: 168 IACYQKSLVL 177


>gi|395546237|ref|XP_003774996.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit
           [Sarcophilus harrisii]
          Length = 1075

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 65  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 123

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 124 NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 180

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 181 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 235

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 236 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 292

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 293 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 352

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 353 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 401

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 402 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 458

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 459 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 517



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 122 YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 177

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 178 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 234

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 235 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 291

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 292 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 348

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 349 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 400

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 401 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 459

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 460 ----DAHSNLASIHKDSGNIPEAIASYRTAL 486



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 89  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 147

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 148 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 204

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 205 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 238

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 239 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 285

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 286 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 336

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 337 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 383


>gi|449499306|ref|XP_002189786.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit, partial
           [Taeniopygia guttata]
          Length = 1038

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 102/478 (21%), Positives = 191/478 (39%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 28  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 86

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 87  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 143

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 144 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 198

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 199 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 255

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+ ++A +   T L
Sbjct: 256 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVVEAEECYNTAL 313

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 314 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 365

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 366 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 422

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 423 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 480



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 85  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 140

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 141 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 197

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 198 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 254

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 255 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVVEAEECYNT 311

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 312 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 363

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 364 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 422

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 423 ----DAHSNLASIHKDSGNIPEAIASYRTAL 449


>gi|423065545|ref|ZP_17054335.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
 gi|406712988|gb|EKD08163.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
          Length = 917

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 10/273 (3%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G++  A SA+    E   +   +    A +  N G + +++ FY++A+ + P+    +  
Sbjct: 53  GQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLSPNW-ADLHY 111

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G   +  G +  A   +++A+ L+P+  +A +    M L+ NE   I   ++ +Q+  
Sbjct: 112 HLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLD---MGLRLNERGDIDTAIKVLQQGG 168

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
              P      N L    +   Q   +++         N  PT+   Y NL  ++  +G  
Sbjct: 169 INCPNFKEIFNTLG---YLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLGWAWTYQGKL 225

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            +A   Y    K I+   +    Y  LG++  +  + R A++ F+K + I PDN      
Sbjct: 226 SEAIAAYQ---KAISLKPDLAIAYSNLGKLWQQKNNHRQAISYFQKAIAIEPDNIMFYSD 282

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
            G   + +G + +A    +KA  IDP+  Q +I
Sbjct: 283 CGSSCLIIGWLSQAMACFQKAIAIDPKFVQGYI 315



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFI----FPYYGLGQVQLKLGDFRSALTNF 320
           N A +Y   G+  +     MA++    K  E        Y  L Q+   +G F  A++ +
Sbjct: 37  NCAIAYQLLGNIHEDYGQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFY 96

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
           ++ +++ P+  +    LG      G IE A     KA  ++P+  QA++D+G  L  ++ 
Sbjct: 97  QQAIDLSPNWADLHYHLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLDMGLRL--NER 154

Query: 381 GAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           G       TA  +L++ G   P   E+ N +G +  ++ + + A   F++AL
Sbjct: 155 G----DIDTAIKVLQQGGINCPNFKEIFNTLGYLQLQQNQIDEAIAIFQEAL 202



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 20/175 (11%)

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
           +   M    +AFE+ P  A++  YLA  +   G         + A+ ++   P  +  +Y
Sbjct: 55  LMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLS---PNWADLHY 111

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG---DFRSALTNFE 321
           +L  + H +G+ E A   Y  ++    K          LGQ  L +G   + R  +    
Sbjct: 112 HLGSALHWQGNIEGAIGCYEKAIALNPK----------LGQAYLDMGLRLNERGDIDTAI 161

Query: 322 KVLEIYPDNC----ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           KVL+    NC    E    LG++ +Q  QI++A  + ++A  IDP +   + +LG
Sbjct: 162 KVLQQGGINCPNFKEIFNTLGYLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLG 216


>gi|212212959|ref|YP_002303895.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011369|gb|ACJ18750.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuG_Q212]
          Length = 561

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 29/318 (9%)

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           LL +A  +  +G   ++LE Y + L+  P    A+  G G+   +LG+  +A     RAL
Sbjct: 5   LLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALH-GAGIALSQLGRNDEALHYIDRAL 63

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFT 236
            L+P+N          + + N  +   K +E      +A ++ P  A A N +AN FF  
Sbjct: 64  LLEPQNA------TFQNSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQ 117

Query: 237 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE---INKP 293
            +    ++  + A+A+    P  +++++N AR      +Y +A    +A +K    ++  
Sbjct: 118 KKFDNAKKAYQKAIALK---PHFANAHFNYARLLIELENYHQA----IAELKRTVAMSSH 170

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
           H   F    L  V + LGDF  A+T +EK L + P+N +     G  +++  Q +KA + 
Sbjct: 171 HSAAFS--QLAHVYMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDY 228

Query: 354 LRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 412
              A  ++P        L    L   D   AL  +      L++  ++  IE   N+GV+
Sbjct: 229 FTNALLLNPEHPDCHYSLATAYLQRGDHKEALLHY------LRQLEKKPQIECYYNVGVL 282

Query: 413 HFEKGEFESAHQSFKDAL 430
           H  +     A   FK AL
Sbjct: 283 HMYQERHREAIDYFKQAL 300



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 16/301 (5%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +G ++ A   +  VLE D     AL G        GR  ++L +  RAL + P      +
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQ-NATFQ 73

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
              G    + G+L +A  A+ +A+QL P++  A   +A    +  +    +K     Q+A
Sbjct: 74  NSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQKKFDNAKKA---YQKA 130

Query: 216 FEIYPYCAMA-LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             + P+ A A  NY          H  + +L  T    ++H    S ++  LA  Y   G
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHH----SAAFSQLAHVYMYLG 186

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           D+ KA  YY    K +    E     Y  G   LK   F+ A+  F   L + P++ +  
Sbjct: 187 DFSKAITYYE---KRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCH 243

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDTG-AALDAFKTART 392
            +L   Y+Q G  ++A  LL    +++ +   + + ++G L +  +    A+D FK A  
Sbjct: 244 YSLATAYLQRGDHKEA--LLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALI 301

Query: 393 L 393
           L
Sbjct: 302 L 302



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 39/268 (14%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
            G+  ++   Y +A+Q+ P    A    I  C ++  +   A++A+Q+A+ L P    A 
Sbjct: 83  HGKLVEATIAYDQAIQLQPDHATAYN-NIANCFFRQKKFDNAKKAYQKAIALKPHFANAH 141

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ----------- 238
              A + +   E     + + +++R   +  + + A + LA+ + + G            
Sbjct: 142 FNYARLLI---ELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKR 198

Query: 239 -----------------HFLVEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDYEK 278
                            H    Q  +     TN     P     +Y+LA +Y  +GD+++
Sbjct: 199 LALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAYLQRGDHKE 258

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A L+Y+  +++  KP   I  YY +G + +     R A+  F++ L + P+  E    + 
Sbjct: 259 ALLHYLRQLEK--KPQ--IECYYNVGVLHMYQERHREAIDYFKQALILDPNYREAHLNIA 314

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
            +Y+++ QI++A E       + P D++
Sbjct: 315 AVYLKINQIKQAIEHYESTLVLKPNDSE 342


>gi|440901878|gb|ELR52744.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit, partial [Bos grunniens mutus]
          Length = 1037

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 26  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 84

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 85  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 141

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 142 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 196

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 197 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 253

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 254 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 313

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 314 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 362

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 363 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 419

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 478



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 83  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 138

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 139 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 195

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 196 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 252

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 253 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 309

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 310 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 361

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 362 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 420

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 421 ----DAHSNLASIHKDSGNIPEAIASYRTAL 447



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 50  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 108

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 109 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 165

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 166 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 199

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 200 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 246

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 247 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 297

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 298 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 344


>gi|326918804|ref|XP_003205676.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like,
           partial [Meleagris gallopavo]
          Length = 1038

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 85  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 140

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 141 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 197

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 198 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 254

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 255 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 311

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 312 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 363

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 364 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 422

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 423 ----DAHSNLASIHKDSGNIPEAIASYRTAL 449



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 194/478 (40%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 28  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 86

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 87  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 143

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 144 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 198

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 199 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 255

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 256 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 313

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL   ++     + +        AS+
Sbjct: 314 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKALE--VFPEFAAAHSNL------ASV 363

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
           LQ +  +L     +    + +         N+   L+++ D   A   Y   +     + 
Sbjct: 364 LQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 422

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 423 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 480


>gi|13775066|gb|AAK39123.1|AF363030_1 UDP-N-acetylglucosaminyltransferase [Mus musculus]
          Length = 1046

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|257458204|ref|ZP_05623358.1| TPR domain protein [Treponema vincentii ATCC 35580]
 gi|257444498|gb|EEV19587.1| TPR domain protein [Treponema vincentii ATCC 35580]
          Length = 388

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 127/291 (43%), Gaps = 19/291 (6%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 148
           +G L L   E+++A + FK +LE D +N  AL+G       R +  ++ E+Y   L+ HP
Sbjct: 42  EGYLFLKANEIDRAEAEFKKMLELDENNNYALVGLGDAARKRNKCKEAAEYYSECLRHHP 101

Query: 149 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
               A+  G+  C   +    KA + +++ L+ D  N+     +A    + ++    +K 
Sbjct: 102 GNNYAL-FGLADCYKNMNLYAKAIEIWEQYLEHDNANITVFTRVADAYRKIHDFQNSKKL 160

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL---AVTNHGP--TKSHSY 263
             K+    E  PY  + L +L         H+  ++  E  +    + +  P        
Sbjct: 161 YLKVLEIEENNPYALIGLGHL---------HYDFKKYREALVYWQKIFDQNPENVDIRIL 211

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            ++   Y     +++ G+YY    K + K  +  +  +GL      +   + ++  +E +
Sbjct: 212 TSIGNCYRKMKQFDR-GVYYFE--KALEKDPDNFYGLFGLADCYRGMKQQQHSIKYWEAI 268

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           L   P+N   L  +G  Y  +G  EKA+++ ++A  ID  D+ A + L  L
Sbjct: 269 LSKDPNNKVILTRMGDAYRHIGDYEKAEQIYQRALDID-YDSYAILGLAIL 318


>gi|46909607|ref|NP_631883.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Mus musculus]
 gi|146325019|sp|Q8CGY8.2|OGT1_MOUSE RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|34785719|gb|AAH57319.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Mus musculus]
 gi|148682191|gb|EDL14138.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Mus
           musculus]
          Length = 1046

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 408
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 467
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 468 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 527
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 528 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 574
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|328699992|ref|XP_003241117.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Acyrthosiphon pisum]
 gi|328699994|ref|XP_003241118.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 3 [Acyrthosiphon pisum]
 gi|328699996|ref|XP_003241119.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 4 [Acyrthosiphon pisum]
 gi|328699998|ref|XP_001952129.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Acyrthosiphon pisum]
          Length = 1108

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 32/308 (10%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G+LLL    +++A   FKI      +    L   A V +  G++  ++  YK+AL+++P 
Sbjct: 228 GKLLLKLNRIKEAKKHFKIANNCATECPDTLKNLADVYYLIGKFEKAISKYKKALEINPD 287

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM-DLQANEAAGI--- 205
              A    +G+   K+ +   A   F +AL+L+PENV  L +LAV    Q N    +   
Sbjct: 288 LINA-YFYLGMAHLKVTEFQNAANIFLKALELEPENVSVLRSLAVTYCFQENMLLCVEVY 346

Query: 206 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 265
           +K ++    AF +     +AL YL N   +      +++  +         P +   + N
Sbjct: 347 KKCLKLQPEAFNL--NLELALIYLHNLQNYQEAVIYLKKCIQL-------NPNRIDLFKN 397

Query: 266 LARSYHSKGDYEKA-------GLYYMASVKEINKPHEFI----------FPYYGLGQVQL 308
           L  +Y    D+  A       G  Y+ S  + N  + F           F ++ +G    
Sbjct: 398 LFVAYRKSNDHLNASDACMSIGDLYLESDDQENARNAFFCAILLNPRNAFGHWKVGLTMY 457

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI-DPRDAQA 367
            LG    ALT ++  +E+ P        +  IY + G  EKA +  + A ++  P    A
Sbjct: 458 NLGHLDLALTRYKHAIELKPTLANAYCDIAIIYEEYGISEKAIDYYKMAIQLQQPTHYNA 517

Query: 368 FIDLGELL 375
            ++L  +L
Sbjct: 518 CLNLANIL 525



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 157/377 (41%), Gaps = 47/377 (12%)

Query: 42  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 101
           N   VYY  +GK E            A   Y KA  I+    + +   G   L   E + 
Sbjct: 260 NLADVYYL-IGKFEK-----------AISKYKKALEINPDLINAYFYLGMAHLKVTEFQN 307

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A++ F   LE + +NV  L   A     +      +E YK+ L++ P    A  L + L 
Sbjct: 308 AANIFLKALELEPENVSVLRSLAVTYCFQENMLLCVEVYKKCLKLQPE---AFNLNLELA 364

Query: 162 RYKLGQLGKARQA---FQRALQLDPENVEALVALAVMDLQANEA-----AGIRKG----- 208
              L  L   ++A    ++ +QL+P  ++    L V   ++N+      A +  G     
Sbjct: 365 LIYLHNLQNYQEAVIYLKKCIQLNPNRIDLFKNLFVAYRKSNDHLNASDACMSIGDLYLE 424

Query: 209 ---MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTK 259
               E  + AF    +CA+ LN   N F        +  L    LA+T +       PT 
Sbjct: 425 SDDQENARNAF----FCAILLN-PRNAFGHWKVGLTMYNLGHLDLALTRYKHAIELKPTL 479

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG-DFRSALT 318
           +++Y ++A  Y   G  EKA  YY  ++ ++ +P  +      L  +  +L  +   ALT
Sbjct: 480 ANAYCDIAIIYEEYGISEKAIDYYKMAI-QLQQPTHY-NACLNLANILYRLNINLNDALT 537

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS 378
           ++EK LE    + +    +G+IY +L + + A      A + DP   +A++ +G   I  
Sbjct: 538 HYEKALEYDNTSVDVYIHMGNIYTELNRSKDALRCFYMAIQHDPHCLEAYMYIGS--IQK 595

Query: 379 DTGAALDAFKTARTLLK 395
           D+   ++A +    +LK
Sbjct: 596 DSDNFIEAIRAYEFVLK 612



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 33/294 (11%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           FN G Y   ++  + A  ++P+C   +     L   K  +   A++   +   + P  V+
Sbjct: 130 FNCGNYEKCIDCLEIANNINPNCSEVLS-NFALVYMKKSENDLAKEYLFKVCTIKPFCVD 188

Query: 188 ALVALAVMDLQANEAAGIRKGMEK-------MQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           A    A    + N+        E+       + +    Y    + LN +        +HF
Sbjct: 189 AWTDYADFLFKTNDLITAELAYERVLSLKPELYKVHNKYGKLLLKLNRIKE----AKKHF 244

Query: 241 LVEQLTETALAVTNHGPTKS-HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
                      + N+  T+   +  NLA  Y+  G +EKA   Y  ++ EIN   + I  
Sbjct: 245 ----------KIANNCATECPDTLKNLADVYYLIGKFEKAISKYKKAL-EINP--DLINA 291

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y+ LG   LK+ +F++A   F K LE+ P+N   L++L   Y     +    E+ +K  K
Sbjct: 292 YFYLGMAHLKVTEFQNAANIFLKALELEPENVSVLRSLAVTYCFQENMLLCVEVYKKCLK 351

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGV 411
           + P      ++L  + + +     L  ++ A   LKK  +  P  I++  N+ V
Sbjct: 352 LQPEAFNLNLELALIYLHN-----LQNYQEAVIYLKKCIQLNPNRIDLFKNLFV 400


>gi|196000432|ref|XP_002110084.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
 gi|190588208|gb|EDV28250.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
          Length = 1330

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 113/511 (22%), Positives = 209/511 (40%), Gaps = 92/511 (18%)

Query: 1   MQREYFKQGKVEQFRQILEEG---SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK 57
           M   Y  QGK E+   + E+    S P +   + DV     A  N +G  Y + GK    
Sbjct: 157 MGAVYSNQGKYEEAISMYEKSLKISLPVLGHNHPDVA----ASYNNMGEAYRHQGK---- 208

Query: 58  QREKEEHFILATQYYNKASRIDM-----HEP---STWVGKGQLLLAKGEVEQASSAF--- 106
            REK      A   Y K+ +I +     + P   +++   G +   +G+ E+A S +   
Sbjct: 209 -REK------AISMYEKSLKIRLSVLGHNHPDVAASYNNMGAVYSDQGKHEEAISMYEKS 261

Query: 107 -KIVLEADRDNVPALL----GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
            KI L     N P +         V  N+G+Y +++  YK++L++  S  G       + 
Sbjct: 262 LKITLSIFGHNHPDVAVSYNNIGAVYSNQGKYEEAISMYKKSLKIRLSVFGHNHPNAAVS 321

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMD-----LQANEAAGIRKGMEKMQRAF 216
              LG +   +   + A+ +  +++E ++++   +     +  N    +     K + A 
Sbjct: 322 YNNLGTVYLDQSKHEEAISMYKKSLEIIISVLGHNHPDVAVSYNNMGAVYSNQGKHEEAI 381

Query: 217 EIY---------------PYCAMALNYLANHFFFTGQH----FLVEQLTETALAVTNHG- 256
            +Y               P   ++ N L N +   G++     + E+  +  L+V +H  
Sbjct: 382 SMYEKSLKIKLSVLGHNHPDITVSYNNLGNAYLDQGKYEEAISMYEKSLKIRLSVLDHNH 441

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFIFPYYGLGQVQLKL 310
           P  + SY N+  +Y  +G +E+A   Y  S+K        N P +    Y  LG      
Sbjct: 442 PDIAVSYNNMGEAYRHQGKHEEAISMYEQSLKIRLSVLGHNHP-DVAMSYNNLGNAYRHQ 500

Query: 311 GDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI-- 360
                A++ +EK L+I        +PD   +   +G +Y   G+ E+A  + +K+ KI  
Sbjct: 501 SKHEEAISMYEKSLKITLPVLGHNHPDVAGSYSNMGAVYSNQGKYEEAISMNKKSLKIRL 560

Query: 361 ------DPRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IEVLNN 408
                  P  A ++ ++GE  +    G   +A     K+ +  L   G   P      NN
Sbjct: 561 SVLGHNHPDVAASYNNMGE--VYRHQGKHEEAISMYEKSLKITLSVLGHNHPDVAASYNN 618

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLL 439
           +G  +F +G++E A   ++ +L   I L++L
Sbjct: 619 LGNTYFNQGKYEEAISMYEKSL--KIRLSVL 647



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 105/473 (22%), Positives = 194/473 (41%), Gaps = 92/473 (19%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEPSTWVGK---GQLLLA 95
           + V Y  +G + + Q + EE    A   Y K+ +I +     + P   V     G   L 
Sbjct: 360 VAVSYNNMGAVYSNQGKHEE----AISMYEKSLKIKLSVLGHNHPDITVSYNNLGNAYLD 415

Query: 96  KGEVEQASSAF----KIVLEADRDNVPALLGQACVEFN--------RGRYSDSLEFYKRA 143
           +G+ E+A S +    KI L     N P +     V +N        +G++ +++  Y+++
Sbjct: 416 QGKYEEAISMYEKSLKIRLSVLDHNHPDI----AVSYNNMGEAYRHQGKHEEAISMYEQS 471

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 203
           L++  S  G     + +    LG   + +   + A+ +  ++++  + L V+     + A
Sbjct: 472 LKIRLSVLGHNHPDVAMSYNNLGNAYRHQSKHEEAISMYEKSLK--ITLPVLGHNHPDVA 529

Query: 204 GIRKGMEKM--------------QRAFEI--------YPYCAMALNYLANHFFFTGQHFL 241
           G    M  +              +++ +I        +P  A + N +   +   G+H  
Sbjct: 530 GSYSNMGAVYSNQGKYEEAISMNKKSLKIRLSVLGHNHPDVAASYNNMGEVYRHQGKHEE 589

Query: 242 VEQLTETALAVT------NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------E 289
              + E +L +T      NH P  + SY NL  +Y ++G YE+A   Y  S+K       
Sbjct: 590 AISMYEKSLKITLSVLGHNH-PDVAASYNNLGNTYFNQGKYEEAISMYEKSLKIRLSVLG 648

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIY 341
            N P +    Y  +G V L  G +  A++ +EK L+I        +PD   +   +G  Y
Sbjct: 649 HNHP-DVAVLYNNMGAVNLDQGKYEEAISMYEKSLKITLSVLGHNHPDVAASYNNMGEAY 707

Query: 342 VQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF----KT 389
              G+ E+A  +  K+ KI         P  A ++ +LG        G   +A     K+
Sbjct: 708 RYQGKHEEAISMYEKSLKITLSVLGHNHPDIAGSYNNLGNAY--RHQGKHEEAISMYEKS 765

Query: 390 ARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD 440
            +  L   G   P      NN+G  +  +G++E A   ++ +L   I L++LD
Sbjct: 766 LKITLSVLGHNHPDVAGSYNNLGNAYSNQGKYEEAISMYEKSL--KIRLSVLD 816



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 161/744 (21%), Positives = 302/744 (40%), Gaps = 132/744 (17%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEPSTWVGK---GQLLLA 95
           + V Y  +G + + Q + EE    A   Y K+ +I +     + P+  V     G + L 
Sbjct: 276 VAVSYNNIGAVYSNQGKYEE----AISMYKKSLKIRLSVFGHNHPNAAVSYNNLGTVYLD 331

Query: 96  KGEVEQASSAFK----IVLEADRDNVPALL----GQACVEFNRGRYSDSLEFYKRALQVH 147
           + + E+A S +K    I++     N P +         V  N+G++ +++  Y+++L++ 
Sbjct: 332 QSKHEEAISMYKKSLEIIISVLGHNHPDVAVSYNNMGAVYSNQGKHEEAISMYEKSLKIK 391

Query: 148 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 207
            S  G     I +    LG     +  ++ A+ +  ++++  + L+V+D           
Sbjct: 392 LSVLGHNHPDITVSYNNLGNAYLDQGKYEEAISMYEKSLK--IRLSVLDHN--------- 440

Query: 208 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQH----FLVEQLTETALAVTNHG-PTKSHS 262
                      +P  A++ N +   +   G+H     + EQ  +  L+V  H  P  + S
Sbjct: 441 -----------HPDIAVSYNNMGEAYRHQGKHEEAISMYEQSLKIRLSVLGHNHPDVAMS 489

Query: 263 YYNLARSYHSKGDYEKAGLYYMASVKEI------NKPHEFIFPYYGLGQVQLKLGDFRSA 316
           Y NL  +Y  +  +E+A   Y  S+K        N P +    Y  +G V    G +  A
Sbjct: 490 YNNLGNAYRHQSKHEEAISMYEKSLKITLPVLGHNHP-DVAGSYSNMGAVYSNQGKYEEA 548

Query: 317 LTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID------- 361
           ++  +K L+I        +PD   +   +G +Y   G+ E+A  +  K+ KI        
Sbjct: 549 ISMNKKSLKIRLSVLGHNHPDVAASYNNMGEVYRHQGKHEEAISMYEKSLKITLSVLGHN 608

Query: 362 -PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP-IEVL-NNIGVIHF 414
            P  A ++ +LG      + G   +A     K+ +  L   G   P + VL NN+G ++ 
Sbjct: 609 HPDVAASYNNLGNTYF--NQGKYEEAISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVNL 666

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 474
           ++G++E A   ++ +L   I L++L         D +AS   + +M   +R++  G H E
Sbjct: 667 DQGKYEEAISMYEKSLK--ITLSVLGHNHP----DVAAS---YNNMGEAYRYQ--GKHEE 715

Query: 475 -LPWNKVTVLFNLARLLEQIHDTVAASV-----LYRLILFKYQDYVDAY-----LRLAAI 523
            +   + ++   L+ +L   H  +A S       YR    K+++ +  Y     + L+ +
Sbjct: 716 AISMYEKSLKITLS-VLGHNHPDIAGSYNNLGNAYRH-QGKHEEAISMYEKSLKITLSVL 773

Query: 524 AKARNNLQLSIELVNEALKVNGKYPNALSM--------LGDLELKNDD----WVKAKETF 571
                ++  S   +  A    GKY  A+SM        L  L+  + D    +    E +
Sbjct: 774 GHNHPDVAGSYNNLGNAYSNQGKYEEAISMYEKSLKIRLSVLDHNHPDIAASYNNMGEAY 833

Query: 572 RAASDATDGKDSYAT-----LSLGNWNY--FAALRNEKRAPKLEATHLEKA-----KELY 619
           R      +    Y       LS+   N+   A L N   A  L+    E+A     K L 
Sbjct: 834 RHQGKREEAISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVYLDQGKHEEAISMHEKSLK 893

Query: 620 TRVIV---QHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV---WI 673
            R+ V    H     + N  G V + +G+ + +  +  +  +     +    PDV   + 
Sbjct: 894 IRLSVLGHNHPDVAGSYNNIGTVYSNQGKHEEAISMKKKSLKIRLSVLGHNHPDVAASYN 953

Query: 674 NLAHVYFAQGNFALAMKMYQNCLR 697
           N+  VY  QG    A+ MY+  L+
Sbjct: 954 NMGEVYRHQGKHEEAISMYEKSLK 977



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 100/456 (21%), Positives = 185/456 (40%), Gaps = 84/456 (18%)

Query: 48   YTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEPSTWV---GKGQLLLAKGEV 99
            Y  +G+    Q ++EE    A   Y K+ +I +     + P   V     G + L +G+ 
Sbjct: 826  YNNMGEAYRHQGKREE----AISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVYLDQGKH 881

Query: 100  EQASS----AFKIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCP 151
            E+A S    + KI L     N P + G       V  N+G++ +++   K++L++  S  
Sbjct: 882  EEAISMHEKSLKIRLSVLGHNHPDVAGSYNNIGTVYSNQGKHEEAISMKKKSLKIRLSVL 941

Query: 152  GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME- 210
            G     +      +G++ + +   + A+ +  ++++  + L+V+       A     +  
Sbjct: 942  GHNHPDVAASYNNMGEVYRHQGKHEEAISMYEKSLK--ITLSVLGHNHPHVAASYNNLGN 999

Query: 211  ------KMQRAFEIY---------------PYCAMALNYLANHFFFTGQHFLVEQLTETA 249
                  K + A  +Y               P  A + N L N +   G+H     + E +
Sbjct: 1000 AYLDHGKHEEAISMYEKSLKIRLAVLGHNHPDVAGSYNNLGNAYRHQGKHEEAISMYEKS 1059

Query: 250  LAVT------NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFI 297
            L +T      NH P  + SY N+   Y ++G YE+A   Y  S+K      + N P +  
Sbjct: 1060 LKITLSVLGHNH-PDIAASYNNMGAVYSNQGKYEEAISMYEKSLKIRLSVLDHNHP-DIA 1117

Query: 298  FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEK 349
              Y  LG      G    A++ +EK L+I        +PD   +   LG+ +   G++E+
Sbjct: 1118 GSYNNLGNAHRHQGKLEEAISMYEKSLKIRLSVLDHNHPDVAVSYNNLGNAHRHQGKLEE 1177

Query: 350  AQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDA-------FKTARTLL 394
            A  +  K+ KI         P  A  + ++G + +  D G   +A        K   ++L
Sbjct: 1178 AISMYEKSLKITLSVLDHNHPHVAAIYNNMGAVYV--DQGKHEEAISMYEKSLKITLSVL 1235

Query: 395  KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                  V +   NNI  ++  +G+ E A   +K +L
Sbjct: 1236 DHNHPHVAVS-YNNIRAVYSNQGKHEEAISMYKKSL 1270



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 160/761 (21%), Positives = 304/761 (39%), Gaps = 132/761 (17%)

Query: 48   YTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEP---STWVGKGQLLLAKGEV 99
            Y  +G++   Q + EE    A   Y K+ +I +     + P   +++   G     +G+ 
Sbjct: 574  YNNMGEVYRHQGKHEE----AISMYEKSLKITLSVLGHNHPDVAASYNNLGNTYFNQGKY 629

Query: 100  EQASSAF----KIVLEADRDNVP--ALL--GQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
            E+A S +    KI L     N P  A+L      V  ++G+Y +++  Y+++L++  S  
Sbjct: 630  EEAISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVNLDQGKYEEAISMYEKSLKITLSVL 689

Query: 152  GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME- 210
            G     +      +G+  + +   + A+ +  ++++  + L+V+     + AG    +  
Sbjct: 690  GHNHPDVAASYNNMGEAYRYQGKHEEAISMYEKSLK--ITLSVLGHNHPDIAGSYNNLGN 747

Query: 211  ------KMQRAFEIY---------------PYCAMALNYLANHFFFTGQH----FLVEQL 245
                  K + A  +Y               P  A + N L N +   G++     + E+ 
Sbjct: 748  AYRHQGKHEEAISMYEKSLKITLSVLGHNHPDVAGSYNNLGNAYSNQGKYEEAISMYEKS 807

Query: 246  TETALAVTNHG-PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFIF 298
             +  L+V +H  P  + SY N+  +Y  +G  E+A   Y  S+K        N P +   
Sbjct: 808  LKIRLSVLDHNHPDIAASYNNMGEAYRHQGKREEAISMYEKSLKIRLSVLGHNHP-DVAV 866

Query: 299  PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKA 350
             Y  +G V L  G    A++  EK L+I        +PD   +   +G +Y   G+ E+A
Sbjct: 867  LYNNMGAVYLDQGKHEEAISMHEKSLKIRLSVLGHNHPDVAGSYNNIGTVYSNQGKHEEA 926

Query: 351  QELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAG 398
              + +K+ KI         P  A ++ ++GE  +    G   +A     K+ +  L   G
Sbjct: 927  ISMKKKSLKIRLSVLGHNHPDVAASYNNMGE--VYRHQGKHEEAISMYEKSLKITLSVLG 984

Query: 399  EEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
               P      NN+G  + + G+ E A   ++ +L   I L +L         D + S   
Sbjct: 985  HNHPHVAASYNNLGNAYLDHGKHEEAISMYEKSLK--IRLAVLGHNHP----DVAGSY-- 1036

Query: 457  FKDMQLFHRFENDGNHVE-LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF----KYQ 511
                 L + + + G H E +   + ++   L+ +L   H  +AAS      ++    KY+
Sbjct: 1037 ---NNLGNAYRHQGKHEEAISMYEKSLKITLS-VLGHNHPDIAASYNNMGAVYSNQGKYE 1092

Query: 512  DYVDAY-----LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM--------LGDLE 558
            + +  Y     +RL+ +     ++  S   +  A +  GK   A+SM        L  L+
Sbjct: 1093 EAISMYEKSLKIRLSVLDHNHPDIAGSYNNLGNAHRHQGKLEEAISMYEKSLKIRLSVLD 1152

Query: 559  LKNDD----WVKAKETFRAASDATDGKDSY-----ATLSLGNWNY--FAALRNEKRAPKL 607
              + D    +       R      +    Y      TLS+ + N+   AA+ N   A  +
Sbjct: 1153 HNHPDVAVSYNNLGNAHRHQGKLEEAISMYEKSLKITLSVLDHNHPHVAAIYNNMGAVYV 1212

Query: 608  EATHLEKAKELY------TRVIVQHTSNLYAA--NGAGVVLAEKGQFDVSKDLFTQVQEA 659
            +    E+A  +Y      T  ++ H     A   N    V + +G+ + +  ++ +  + 
Sbjct: 1213 DQGKHEEAISMYEKSLKITLSVLDHNHPHVAVSYNNIRAVYSNQGKHEEAISMYKKSLKI 1272

Query: 660  ASGSVFVQMPDV---WINLAHVYFAQGNFALAMKMYQNCLR 697
             S  +    PDV   + NL + Y  QG    A+ MY+  L+
Sbjct: 1273 TSSVLGHNHPDVALSYNNLGNAYDKQGKHEEAISMYEKSLK 1313



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 118/530 (22%), Positives = 221/530 (41%), Gaps = 92/530 (17%)

Query: 241 LVEQLTETALAVTNHG-PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKP 293
           + ++L +  L+V  H  P  + SY N+   Y ++G YE+A   Y  S+K        N P
Sbjct: 131 MFKKLLKITLSVLGHNHPDAAASYNNMGAVYSNQGKYEEAISMYEKSLKISLPVLGHNHP 190

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLG 345
            +    Y  +G+     G    A++ +EK L+I        +PD   +   +G +Y   G
Sbjct: 191 -DVAASYNNMGEAYRHQGKREKAISMYEKSLKIRLSVLGHNHPDVAASYNNMGAVYSDQG 249

Query: 346 QIEKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF----KTARTL 393
           + E+A  +  K+ KI         P  A ++ ++G   + S+ G   +A     K+ +  
Sbjct: 250 KHEEAISMYEKSLKITLSIFGHNHPDVAVSYNNIGA--VYSNQGKYEEAISMYKKSLKIR 307

Query: 394 LKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDAS 451
           L   G   P   +  NN+G ++ ++ + E A   +K +L   I +++L         D +
Sbjct: 308 LSVFGHNHPNAAVSYNNLGTVYLDQSKHEEAISMYKKSL--EIIISVLGHNHP----DVA 361

Query: 452 ASMLQFKDMQLFHRFENDGNHVE-LPWNKVTVLFNLARLLEQIHD-TVAASVLYRLIL-- 507
            S   + +M     + N G H E +   + ++   L+ L     D TV+ + L    L  
Sbjct: 362 VS---YNNMGAV--YSNQGKHEEAISMYEKSLKIKLSVLGHNHPDITVSYNNLGNAYLDQ 416

Query: 508 FKYQDYVDAY-----LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM--------- 553
            KY++ +  Y     +RL+ +     ++ +S   + EA +  GK+  A+SM         
Sbjct: 417 GKYEEAISMYEKSLKIRLSVLDHNHPDIAVSYNNMGEAYRHQGKHEEAISMYEQSLKIRL 476

Query: 554 --LG----DLELKNDDWVKAKETFRAASDATDGKDSY-----ATLSL---------GNWN 593
             LG    D+ +  ++   A   +R  S   +    Y      TL +         G+++
Sbjct: 477 SVLGHNHPDVAMSYNNLGNA---YRHQSKHEEAISMYEKSLKITLPVLGHNHPDVAGSYS 533

Query: 594 YFAALRNEKRAPKLEATHLEKAKELYTRVIV---QHTSNLYAANGAGVVLAEKGQFDVSK 650
              A+ + +   + EA  + K K L  R+ V    H     + N  G V   +G+ + + 
Sbjct: 534 NMGAVYSNQGKYE-EAISMNK-KSLKIRLSVLGHNHPDVAASYNNMGEVYRHQGKHEEAI 591

Query: 651 DLFTQVQEAASGSVFVQMPDV---WINLAHVYFAQGNFALAMKMYQNCLR 697
            ++ +  +     +    PDV   + NL + YF QG +  A+ MY+  L+
Sbjct: 592 SMYEKSLKITLSVLGHNHPDVAASYNNLGNTYFNQGKYEEAISMYEKSLK 641



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 143/709 (20%), Positives = 287/709 (40%), Gaps = 112/709 (15%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEP---STWVGKGQLLLAKGEV 99
           Y  +G + + Q + EE    A   Y K+ +I +     + P   +++   G+    +G+ 
Sbjct: 154 YNNMGAVYSNQGKYEE----AISMYEKSLKISLPVLGHNHPDVAASYNNMGEAYRHQGKR 209

Query: 100 EQASSAF----KIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           E+A S +    KI L     N P +         V  ++G++ +++  Y+++L++  S  
Sbjct: 210 EKAISMYEKSLKIRLSVLGHNHPDVAASYNNMGAVYSDQGKHEEAISMYEKSLKITLSIF 269

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
           G     + +    +G +   +  ++ A+ +  ++++  + L+V                 
Sbjct: 270 GHNHPDVAVSYNNIGAVYSNQGKYEEAISMYKKSLK--IRLSVFGHN------------- 314

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQH----FLVEQLTETALAVTNHG-PTKSHSYYNL 266
                  +P  A++ N L   +    +H     + ++  E  ++V  H  P  + SY N+
Sbjct: 315 -------HPNAAVSYNNLGTVYLDQSKHEEAISMYKKSLEIIISVLGHNHPDVAVSYNNM 367

Query: 267 ARSYHSKGDYEKAGLYYMASVK------EINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
              Y ++G +E+A   Y  S+K        N P +    Y  LG   L  G +  A++ +
Sbjct: 368 GAVYSNQGKHEEAISMYEKSLKIKLSVLGHNHP-DITVSYNNLGNAYLDQGKYEEAISMY 426

Query: 321 EKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRD 364
           EK L+I        +PD   +   +G  Y   G+ E+A  +  ++ KI         P  
Sbjct: 427 EKSLKIRLSVLDHNHPDIAVSYNNMGEAYRHQGKHEEAISMYEQSLKIRLSVLGHNHPDV 486

Query: 365 AQAFIDLGELL-ISSDTGAALDAF-KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 420
           A ++ +LG      S    A+  + K+ +  L   G   P      +N+G ++  +G++E
Sbjct: 487 AMSYNNLGNAYRHQSKHEEAISMYEKSLKITLPVLGHNHPDVAGSYSNMGAVYSNQGKYE 546

Query: 421 SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE-LPWNK 479
            A    K +L   I L++L         D +AS   + +M   +R +  G H E +   +
Sbjct: 547 EAISMNKKSLK--IRLSVLGHNHP----DVAAS---YNNMGEVYRHQ--GKHEEAISMYE 595

Query: 480 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 539
            ++   L+ +L   H  VAAS         Y +  + Y       +A +  + S+++   
Sbjct: 596 KSLKITLS-VLGHNHPDVAAS---------YNNLGNTYFNQGKYEEAISMYEKSLKIRLS 645

Query: 540 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 599
            L  N  +P+   +  ++   N D  K +E       +   K + + L   + +  A+  
Sbjct: 646 VLGHN--HPDVAVLYNNMGAVNLDQGKYEEAISMYEKSL--KITLSVLGHNHPDVAASYN 701

Query: 600 NEKRAPKLEATHLEKAKELY------TRVIVQHTSNLYAA--NGAGVVLAEKGQFDVSKD 651
           N   A + +  H E+A  +Y      T  ++ H     A   N  G     +G+ + +  
Sbjct: 702 NMGEAYRYQGKH-EEAISMYEKSLKITLSVLGHNHPDIAGSYNNLGNAYRHQGKHEEAIS 760

Query: 652 LFTQVQEAASGSVFVQMPDV---WINLAHVYFAQGNFALAMKMYQNCLR 697
           ++ +  +     +    PDV   + NL + Y  QG +  A+ MY+  L+
Sbjct: 761 MYEKSLKITLSVLGHNHPDVAGSYNNLGNAYSNQGKYEEAISMYEKSLK 809



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 31/197 (15%)

Query: 262 SYYNLARSYHSKGDYEKAGLYY------MASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
           SY  +   Y+S+G+Y++A   +        SV   N P +    Y  +G V    G +  
Sbjct: 111 SYQKIGIVYYSQGNYKEAECMFKKLLKITLSVLGHNHP-DAAASYNNMGAVYSNQGKYEE 169

Query: 316 ALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI------- 360
           A++ +EK L+I        +PD   +   +G  Y   G+ EKA  +  K+ KI       
Sbjct: 170 AISMYEKSLKISLPVLGHNHPDVAASYNNMGEAYRHQGKREKAISMYEKSLKIRLSVLGH 229

Query: 361 -DPRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP-IEV-LNNIGVIH 413
             P  A ++ ++G   + SD G   +A     K+ +  L   G   P + V  NNIG ++
Sbjct: 230 NHPDVAASYNNMGA--VYSDQGKHEEAISMYEKSLKITLSIFGHNHPDVAVSYNNIGAVY 287

Query: 414 FEKGEFESAHQSFKDAL 430
             +G++E A   +K +L
Sbjct: 288 SNQGKYEEAISMYKKSL 304



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 80/371 (21%), Positives = 153/371 (41%), Gaps = 66/371 (17%)

Query: 48   YTYLGKIETKQREKEEHFILATQYYNKASRIDM--------HEPSTWVGKGQLLLAKGEV 99
            Y  +G++   Q + EE    A   Y K+ +I +        H  +++   G   L  G+ 
Sbjct: 952  YNNMGEVYRHQGKHEE----AISMYEKSLKITLSVLGHNHPHVAASYNNLGNAYLDHGKH 1007

Query: 100  EQASSAF----KIVLEADRDNVPALLGQACVEFN----RGRYSDSLEFYKRALQVHPSCP 151
            E+A S +    KI L     N P + G      N    +G++ +++  Y+++L++  S  
Sbjct: 1008 EEAISMYEKSLKIRLAVLGHNHPDVAGSYNNLGNAYRHQGKHEEAISMYEKSLKITLSVL 1067

Query: 152  GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME- 210
            G     I      +G +   +  ++ A+ +  ++++  + L+V+D    + AG    +  
Sbjct: 1068 GHNHPDIAASYNNMGAVYSNQGKYEEAISMYEKSLK--IRLSVLDHNHPDIAGSYNNLGN 1125

Query: 211  ------KMQRAFEIY---------------PYCAMALNYLANHFFFTGQHFLVEQLTETA 249
                  K++ A  +Y               P  A++ N L N     G+      + E +
Sbjct: 1126 AHRHQGKLEEAISMYEKSLKIRLSVLDHNHPDVAVSYNNLGNAHRHQGKLEEAISMYEKS 1185

Query: 250  LAVT------NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFI 297
            L +T      NH P  +  Y N+   Y  +G +E+A   Y  S+K      + N PH  +
Sbjct: 1186 LKITLSVLDHNH-PHVAAIYNNMGAVYVDQGKHEEAISMYEKSLKITLSVLDHNHPHVAV 1244

Query: 298  FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEK 349
              Y  +  V    G    A++ ++K L+I        +PD   +   LG+ Y + G+ E+
Sbjct: 1245 -SYNNIRAVYSNQGKHEEAISMYKKSLKITSSVLGHNHPDVALSYNNLGNAYDKQGKHEE 1303

Query: 350  AQELLRKAAKI 360
            A  +  K+ K+
Sbjct: 1304 AISMYEKSLKV 1314


>gi|443647798|ref|ZP_21129780.1| trypsin family protein [Microcystis aeruginosa DIANCHI905]
 gi|159028723|emb|CAO88195.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
 gi|443335400|gb|ELS49873.1| trypsin family protein [Microcystis aeruginosa DIANCHI905]
          Length = 565

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 27/300 (9%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ +G  LLA G+ E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   
Sbjct: 41  YLWQGDRLLAAGDKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDRGFI 100

Query: 146 VHPSCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQ- 198
           V+   P         + +G    +  +  +A  A+++A+ + P    +  +  A+  LQ 
Sbjct: 101 VNDKPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYRKAMIIKPTFKAQFQLGKALYSLQR 160

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-- 256
            +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A         
Sbjct: 161 WDEAA------KALQAAVFLDPTQGKA-------YFYLGKAYSEQQLWPEASYAYQQALE 207

Query: 257 --PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P +   Y  L  +   +G +E+A   Y  ++    K  +    Y  LG+   + G   
Sbjct: 208 LIPNQGEIYKKLGEALVKQGKWEEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLG 264

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+  F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 265 EAMAVFQQARQISPKNAKIYQNLCYIYINNGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|40063716|gb|AAR38497.1| TPR repeat protein [uncultured marine bacterium 583]
          Length = 733

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 14/250 (5%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           ++ G+  ++L+     ++ +P+ P    L  G+C   +G+L +A ++F++AL + P+  E
Sbjct: 18  YSSGQIQEALDSVGALIKEYPNDPLLYNLS-GICYKTIGELDEAVKSFEKALAIKPDYAE 76

Query: 188 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
               + L + DL   +AA     ++  ++A  I P  A A N L       GQ     + 
Sbjct: 77  VHYNLGLTLQDLGQLDAA-----VKSYEKAIAIKPDYANACNNLGVTLQDLGQLDAAVKS 131

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            E A+A+    P  S +  NL  +  + G  + A   Y  ++    KP ++   +Y LG 
Sbjct: 132 YEKAIAIK---PDFSDANNNLGIALKNLGQLDAAVECYKKALAI--KP-DYAEAHYNLGN 185

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
               LG   +A+  ++K L I PD  +    LG+    LGQ++ A +   KA  I P  A
Sbjct: 186 ALKNLGQLDAAVECYKKALAIKPDYADACNNLGNALKNLGQLDAAVKCYEKAVAIKPDYA 245

Query: 366 QAFIDLGELL 375
           +A+ + G ++
Sbjct: 246 EAYHNNGSVM 255



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 29/304 (9%)

Query: 80  MHEPSTWVGKGQLLLAKGEVEQA-SSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           +  P T +     L + G++++A  S   ++ E   D +   L   C +   G   ++++
Sbjct: 4   VSPPQTEINSLIALYSSGQIQEALDSVGALIKEYPNDPLLYNLSGICYK-TIGELDEAVK 62

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--D 196
            +++AL + P     +   +GL    LGQL  A +++++A+ + P+   A   L V   D
Sbjct: 63  SFEKALAIKPDY-AEVHYNLGLTLQDLGQLDAAVKSYEKAIAIKPDYANACNNLGVTLQD 121

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           L   +AA     ++  ++A  I P  + A N L       GQ     +  + ALA+    
Sbjct: 122 LGQLDAA-----VKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECYKKALAIK--- 173

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLG 311
           P  + ++YNL  +  + G  + A   Y  ++         I P Y      LG     LG
Sbjct: 174 PDYAEAHYNLGNALKNLGQLDAAVECYKKALA--------IKPDYADACNNLGNALKNLG 225

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
              +A+  +EK + I PD  E     G +  +L + ++A      A  I P     FI L
Sbjct: 226 QLDAAVKCYEKAVAIKPDYAEAYHNNGSVMRRLKRQDEALASYESAIAIKPN--LDFI-L 282

Query: 372 GELL 375
           G+LL
Sbjct: 283 GDLL 286


>gi|297304121|ref|XP_002806323.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit [Macaca
           mulatta]
          Length = 963

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456


>gi|292620687|ref|XP_001921543.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Danio rerio]
          Length = 1102

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 103/479 (21%), Positives = 187/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S +F   A + +P    A   
Sbjct: 91  GDFEAAEHHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDMSFQFSTLATKQNPMLAEAYS- 149

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + +++AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 150 NLGNVHKERGQLQEAIERYRQALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 206

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
              P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 207 HCNPDLYCVRS--DLGNLLKALGR---LEEAKRCYLKAIETQPNFAVAWSNLGCVFNAQG 261

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 262 EIWLAIHHFE---KAVTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 318

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R A ++ P    A+ +L   +    +   A + + TA  L
Sbjct: 319 GNLACVYYEQGLIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALRL 378

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL       +       +   AS  
Sbjct: 379 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL------EVFPDFAAAHSNLASVL 427

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    +E     + +         N+   L+++ D   A   Y   +     +
Sbjct: 428 QQQGKLQEALMHYEEA---IRISPTFADAYSNMGNTLKEMQDIQGALRCYTRAIQINPAF 484

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 485 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 543



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A + Y +A R+       ++     L+A G++E A  A+ 
Sbjct: 148 YSNLGNVHKERGQLQE----AIERYRQALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 203

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L  + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 204 SALHCNPDLYCVRSDLGNLLKAL--GRLEEAKRCYLKAIETQPNFAVAWS-NLGCVFNAQ 260

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LD   ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 261 GEIWLAIHHFEKAVTLDASFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 317

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   K +  +A   Y  
Sbjct: 318 HGNLACVYYEQGLIDLAIDTYRHAIELQPHFPD---AYCNLANAMKEKCNVSEAEECYNT 374

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++PD       L  +
Sbjct: 375 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLASV 426

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A     +A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 427 LQQQGKLQEALMHYEEAIRISPTFADAYSNMGNTLKEMQDIQGALRCYTRAIQINPAFA- 485

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 486 ----DAHSNLASIHKDSGNIPEAIASYRTAL 512


>gi|52842693|ref|YP_096492.1| hypothetical protein lpg2485 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|378778381|ref|YP_005186820.1| hypothetical protein lp12_2477 [Legionella pneumophila subsp.
           pneumophila ATCC 43290]
 gi|52629804|gb|AAU28545.1| TPR domain protein [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|364509197|gb|AEW52721.1| TPR domain protein [Legionella pneumophila subsp. pneumophila ATCC
           43290]
          Length = 571

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 149/367 (40%), Gaps = 29/367 (7%)

Query: 20  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 76
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAR 66

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILH 185

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           L+ N  +   +   K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPDNLEYL---YNSGVAQMALGHLNEA 296

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALAINPDDV-----ISRHML 351

Query: 377 SSDTGAA 383
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|148682190|gb|EDL14137.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Mus
           musculus]
          Length = 1036

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446


>gi|449267896|gb|EMC78787.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit, partial [Columba livia]
          Length = 1036

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 195/478 (40%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 26  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 84

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 85  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 141

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 142 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 196

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 197 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 253

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+ ++A +   T L
Sbjct: 254 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVVEAEECYNTAL 311

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL   ++     + +        AS+
Sbjct: 312 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKALE--VFPEFAAAHSNL------ASV 361

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
           LQ +  +L     +    + +         N+   L+++ D   A   Y   +     + 
Sbjct: 362 LQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 420

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 421 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 478



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 83  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 138

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 139 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 195

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 196 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 252

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 253 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVVEAEECYNT 309

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 310 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 361

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 362 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 420

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 421 ----DAHSNLASIHKDSGNIPEAIASYRTAL 447


>gi|118089398|ref|XP_001232519.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Gallus gallus]
          Length = 1035

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 194/478 (40%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 310

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL   ++     + +        AS+
Sbjct: 311 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKALE--VFPEFAAAHSNL------ASV 360

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
           LQ +  +L     +    + +         N+   L+++ D   A   Y   +     + 
Sbjct: 361 LQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 419

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477


>gi|17231874|ref|NP_488422.1| hypothetical protein all4382 [Nostoc sp. PCC 7120]
 gi|17133518|dbj|BAB76081.1| all4382 [Nostoc sp. PCC 7120]
          Length = 311

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 109/264 (41%), Gaps = 30/264 (11%)

Query: 107 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
           K++ +      P LL Q       GR  D++  ++ A+Q+ P+   A    +GL   + G
Sbjct: 35  KLLAQYSLPTAPTLLNQGLQAIQAGRLQDAIAAFQSAIQLDPNL-AAAHYNLGLALRQTG 93

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
           QL  A  AF RA Q DP    A   L    L+ N    +++  + +QRA E+ P    A 
Sbjct: 94  QLQPAADAFYRATQSDPNFALAFANLGGSLLEGNN---LQQANDYLQRALELEPRLGFA- 149

Query: 227 NYLANHFFFTGQHFLVEQLTET----------ALAVTNHGPTKSHSYYNLARSYHSKGDY 276
                H+       LV Q  +           A+ ++ + P     +Y L  SY  +G  
Sbjct: 150 -----HYNLG----LVRQQQQNWEGAIASFQKAVELSKNAP---EPHYYLGISYLQQGKL 197

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            +A   +  ++K IN    +   YY LG V    G  + ALT F K  E  P+       
Sbjct: 198 NEAKNAFNQAIK-INP--RYSEAYYNLGVVLFNQGQPQEALTAFRKSAEANPNYPNAYYG 254

Query: 337 LGHIYVQLGQIEKAQELLRKAAKI 360
            G ++ QL Q  +A ++   A  +
Sbjct: 255 AGLVFTQLNQYGEAAKVFNHAKNL 278



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 7/193 (3%)

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           LQA +A  ++  +   Q A ++ P  A A   L      TGQ   ++   +     T   
Sbjct: 53  LQAIQAGRLQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQ---LQPAADAFYRATQSD 109

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  + ++ NL  S     + ++A  Y     + +       F +Y LG V+ +  ++  A
Sbjct: 110 PNFALAFANLGGSLLEGNNLQQANDYLQ---RALELEPRLGFAHYNLGLVRQQQQNWEGA 166

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           + +F+K +E+  +  E    LG  Y+Q G++ +A+    +A KI+PR ++A+ +LG +L 
Sbjct: 167 IASFQKAVELSKNAPEPHYYLGISYLQQGKLNEAKNAFNQAIKINPRYSEAYYNLGVVLF 226

Query: 377 S-SDTGAALDAFK 388
           +      AL AF+
Sbjct: 227 NQGQPQEALTAFR 239



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LG  +  LG +    R++++++  A   + KA  +  + P      G   L +G++ +A 
Sbjct: 146 LGFAHYNLGLV----RQQQQNWEGAIASFQKAVELSKNAPEPHYYLGISYLQQGKLNEAK 201

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           +AF   ++ +     A      V FN+G+  ++L  ++++ + +P+ P A   G GL   
Sbjct: 202 NAFNQAIKINPRYSEAYYNLGVVLFNQGQPQEALTAFRKSAEANPNYPNAY-YGAGLVFT 260

Query: 164 KLGQLGKARQAFQRA 178
           +L Q G+A + F  A
Sbjct: 261 QLNQYGEAAKVFNHA 275


>gi|66347873|ref|NP_001018115.1| O-linked N-acetylglucosamine transferase isoform 2 [Danio rerio]
 gi|56967374|gb|AAW31871.1| O-GlcNAc transferase variant 2 [Danio rerio]
          Length = 1052

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 195/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 344

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F    +             NLA +L+Q      A + Y+  +     +
Sbjct: 345 -------EVFPEFAAAHS-------------NLASVLQQQGKLQEALMHYKEAIRISPTF 384

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 385 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 444

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 445 ALKLKPDFPDAYCNLA 460


>gi|281337757|gb|EFB13341.1| hypothetical protein PANDA_021118 [Ailuropoda melanoleuca]
          Length = 1037

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 26  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 84

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 85  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 141

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 142 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 196

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 197 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 253

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 254 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 313

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 314 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 362

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 363 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 419

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 478



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 83  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 138

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 139 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 195

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 196 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 252

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 253 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 309

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 310 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 361

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 362 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 420

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 421 ----DAHSNLASIHKDSGNIPEAIASYRTAL 447


>gi|154707419|ref|YP_001424860.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154356705|gb|ABS78167.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 561

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 29/318 (9%)

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           LL +A  +  +G   ++LE Y + L+  P    A+  G G+   +LG+  +A     RAL
Sbjct: 5   LLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALH-GAGIALSQLGRNDEALHYIDRAL 63

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFT 236
            L+P+N          + + N  +   K +E      +A ++ P  A A N +AN FF  
Sbjct: 64  LLEPQNA------TFQNSRGNILSQHGKLVEATIAYDQAIQLQPDYATAYNNIANCFFRQ 117

Query: 237 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE---INKP 293
            +    ++  + A+A+    P  +++++N AR      +Y +A    +A +K    ++  
Sbjct: 118 KKFDNAKKAYQKAIALK---PHFANAHFNYARLLIELENYHQA----IAELKRTVAMSSH 170

Query: 294 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
           H   F    L  V + LGDF  A+T +EK L + P+N +     G  +++  Q +KA + 
Sbjct: 171 HSAAFS--QLAHVYMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDH 228

Query: 354 LRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 412
              A  ++P        L    L   D   AL  +      L++  ++  IE   N+GV+
Sbjct: 229 FTNALLLNPEHPDCHYSLATAYLQRGDHKEALLHY------LRQLEKKPQIECYYNVGVL 282

Query: 413 HFEKGEFESAHQSFKDAL 430
           H  +     A   FK AL
Sbjct: 283 HMYQERHREAIDYFKQAL 300



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 16/301 (5%)

Query: 96  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 155
           +G ++ A   +  VLE D     AL G        GR  ++L +  RAL + P      +
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQ-NATFQ 73

Query: 156 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
              G    + G+L +A  A+ +A+QL P+   A   +A    +  +    +K     Q+A
Sbjct: 74  NSRGNILSQHGKLVEATIAYDQAIQLQPDYATAYNNIANCFFRQKKFDNAKKA---YQKA 130

Query: 216 FEIYPYCAMA-LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             + P+ A A  NY          H  + +L  T    ++H    S ++  LA  Y   G
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHH----SAAFSQLAHVYMYLG 186

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           D+ KA  YY    K +    E     Y  G   LK   F+ A+ +F   L + P++ +  
Sbjct: 187 DFSKAITYYE---KRLALEPENADAQYDCGLAHLKDNQFQKAIDHFTNALLLNPEHPDCH 243

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDTG-AALDAFKTART 392
            +L   Y+Q G  ++A  LL    +++ +   + + ++G L +  +    A+D FK A T
Sbjct: 244 YSLATAYLQRGDHKEA--LLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALT 301

Query: 393 L 393
           L
Sbjct: 302 L 302



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 39/268 (14%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
            G+  ++   Y +A+Q+ P    A    I  C ++  +   A++A+Q+A+ L P    A 
Sbjct: 83  HGKLVEATIAYDQAIQLQPDYATAYN-NIANCFFRQKKFDNAKKAYQKAIALKPHFANAH 141

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ----------- 238
              A + +   E     + + +++R   +  + + A + LA+ + + G            
Sbjct: 142 FNYARLLI---ELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKR 198

Query: 239 -----------------HFLVEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDYEK 278
                            H    Q  +     TN     P     +Y+LA +Y  +GD+++
Sbjct: 199 LALEPENADAQYDCGLAHLKDNQFQKAIDHFTNALLLNPEHPDCHYSLATAYLQRGDHKE 258

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A L+Y+  +++  KP   I  YY +G + +     R A+  F++ L + P+  E    + 
Sbjct: 259 ALLHYLRQLEK--KPQ--IECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLNIA 314

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
            +Y+++ QI++A E       + P D++
Sbjct: 315 AVYLKINQIKQAIEHYESTLVLKPNDSE 342


>gi|72383519|ref|YP_292874.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72003369|gb|AAZ59171.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 362

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           EK+E+  + T   +K S+         + +      KG +++A+  +++ +E    +   
Sbjct: 28  EKQENLTIKTNTPSKPSK------EQIINQAIQFHLKGNIQEAAKYYQLFVEQGFKDHIV 81

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
                 V  N  +  D+   Y++A+++ P    A    +G    +LG+L  A  ++++A+
Sbjct: 82  FSNYGVVLKNLAQTQDAELSYRKAIEIKPDYADA-HYNLGNLLKELGKLQDAELSYRKAI 140

Query: 180 QLDPENVEALVALAVM--DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 237
           ++ P+  +A   L ++  DL  ++ A +       ++A +I P  A A   L       G
Sbjct: 141 EIKPDYADAHYNLGIILNDLGKSQEAEL-----SYRKAIKIKPDYAEAHYNLGIILNDLG 195

Query: 238 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
           +    E     A+ + +     + ++YNL    +  G  ++A L Y  ++K   KP ++ 
Sbjct: 196 KSDQAELSYRRAIEIKS---DYADAHYNLGNLLNDLGKSQEAELSYRKAIKI--KP-DYA 249

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             +Y LG +   LG    A  ++ + +EI  D  +    LG+I   LG+++ A+   RKA
Sbjct: 250 EAHYNLGIILNDLGKSDQAELSYRRAIEIKSDYADAHLNLGNILRDLGELQDAELSTRKA 309

Query: 358 AKIDPRDAQAFIDLGELLISSDTGAALDA 386
            +I P +  A ++LG +L   D G   DA
Sbjct: 310 IEIKPDNTDAHLNLGNIL--RDLGKLKDA 336



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 14/223 (6%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G+  D+   Y++A+++ P    A    +G+    LG+  +A  ++++A+++ P+  EA  
Sbjct: 127 GKLQDAELSYRKAIEIKPDYADA-HYNLGIILNDLGKSQEAELSYRKAIKIKPDYAEAHY 185

Query: 191 ALAVM--DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
            L ++  DL  ++ A +       +RA EI    A A   L N     G+    E     
Sbjct: 186 NLGIILNDLGKSDQAEL-----SYRRAIEIKSDYADAHYNLGNLLNDLGKSQEAELSYRK 240

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
           A+ +    P  + ++YNL    +  G  ++A L Y  ++ EI    ++   +  LG +  
Sbjct: 241 AIKIK---PDYAEAHYNLGIILNDLGKSDQAELSYRRAI-EIKS--DYADAHLNLGNILR 294

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
            LG+ + A  +  K +EI PDN +    LG+I   LG+++ A+
Sbjct: 295 DLGELQDAELSTRKAIEIKPDNTDAHLNLGNILRDLGKLKDAR 337


>gi|320538489|ref|ZP_08038352.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
 gi|320144660|gb|EFW36413.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
          Length = 390

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 113/272 (41%), Gaps = 8/272 (2%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G  LL   + ++A   FK +LE +  N  AL+G       +    +++E+Y   L  HP 
Sbjct: 44  GYALLKIEDTDKAIEEFKKILELEEHNNYALVGLGDAARKKENCKEAIEYYTECLTYHPG 103

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
              A+  G+  C   L Q  KA Q +++ L  D  N+  L  +A    + ++    ++  
Sbjct: 104 NNYAL-FGLADCYKSLNQYAKAIQIWEQYLLHDDTNITVLTRIADAYRKTHDFQNSKRLY 162

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 269
            K+    +  PY  + L +L   F    +     Q     +  TN          ++   
Sbjct: 163 TKVLAIEKNNPYALIGLGHLHYDFKKYKEALFYWQ----KVVDTNPENIDIRVLTSIGNC 218

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
           Y     ++K  +Y+  ++++   P  F +  +GL      LG    ++  +  +LE  P 
Sbjct: 219 YRKMKLFDKGAMYFEKTLEK--DPKNF-YGLFGLADCYRGLGQQEKSIKYWAAILEKDPK 275

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
           N   L  +G  Y  +G  +KA+E  +KA  ID
Sbjct: 276 NKVILTRVGDAYRHIGMYDKAEETYQKALDID 307


>gi|348676330|gb|EGZ16148.1| hypothetical protein PHYSODRAFT_334334 [Phytophthora sojae]
          Length = 610

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 157/378 (41%), Gaps = 30/378 (7%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           K  ++ LA   ++KASRI   +   W     + L    +++A   FK++L  D  N  A 
Sbjct: 129 KAGNYGLARMIFSKASRISF-DAELWTSWASMELEAKNMQEAKRIFKVILATDSHNPMAG 187

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG A  E   G   ++ E ++  L+ HP     I    G+   K   +G AR  FQ A+ 
Sbjct: 188 LGMALWEVQAGHPDEAREKFQELLEEHPK-DVLIMQAYGVFEAKCQHVGLARSIFQNAVS 246

Query: 181 LDPENVEALVALAVMDLQANEAAGIRK-GMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
                 +   A A    +A   AG+ K  +  +  AFE +P     +   A   F  G  
Sbjct: 247 HPRATGQVWHAWA----KAEYDAGLYKNALAVIATAFERFPTHKWLILLGAMAHFKLGDV 302

Query: 240 F----LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPH 294
           +       +L +  L V      ++ +Y + A+     G+ + A GLY    ++ + +  
Sbjct: 303 YEARRAYRRLIDGGLYV------EASAYNSYAKMEEELGNEDAAVGLY----IEALEQYP 352

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           + +     L  +  K    R+A   FE  L+        L+A G    Q G+++ A+EL 
Sbjct: 353 DHVPSMMSLAVLYKKRNRMRNARKVFENALQNLQHTGPVLQAFGGFEEQHGELDNARELY 412

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVI 412
            +A K+ P   +++  L  +       A L  ++ AR++L  A + VP    +L  +  I
Sbjct: 413 DEATKVQPTVIESWRALARV------EARLKNYEAARSVLTMASQHVPNDAPLLIELAKI 466

Query: 413 HFEKGEFESAHQSFKDAL 430
                 F +A  + + AL
Sbjct: 467 EQRNRRFPAARAALEKAL 484


>gi|50423773|ref|XP_460471.1| DEHA2F02464p [Debaryomyces hansenii CBS767]
 gi|49656140|emb|CAG88778.1| DEHA2F02464p [Debaryomyces hansenii CBS767]
          Length = 708

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 125/301 (41%), Gaps = 39/301 (12%)

Query: 83  PSTWVGKGQLLLAKGEVEQASSAFKIVLEAD-----RDNVPALLGQACVEFNRGRYSDSL 137
           P  W G G L    G +E A  AF  VLE D      + +   LG   +  ++G+   +L
Sbjct: 150 PKLWHGIGILYDRYGSLEYAEEAFVRVLELDPNFDKSNEIYFRLG--IIYKHQGKLQSAL 207

Query: 138 EFYKRAL--QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 195
           E ++  L    HP     +   IG    +      A++A+++ LQ++P++ + L  L  +
Sbjct: 208 ECFQYILTNPPHPLTQPDVWFQIGSVLEQQKDWNGAKEAYEKVLQVNPQHAKVLQQLGCL 267

Query: 196 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 255
             QA  A       +  Q+   I      AL YL        Q   ++Q           
Sbjct: 268 YSQAEPAPSGNSNQQPFQQDLNI------ALKYLL-------QSLEIDQ----------- 303

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
             + +HS+Y L R +  +GD+  A   Y A  + +N+       +  +G +  ++  +R 
Sbjct: 304 --SDAHSWYYLGRVHMIRGDFNAA---YEAFQQAVNRDSRNPTFWCSIGVLYYQISQYRD 358

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQL-GQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           AL  + + + + P   E    LG +Y     QI  A +  R+A ++DP +      L +L
Sbjct: 359 ALDAYTRAIRLNPYISEVWYDLGTLYETCNNQISDALDAYRQAERLDPSNPHIKARLDQL 418

Query: 375 L 375
           +
Sbjct: 419 I 419



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 70/368 (19%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
           TW+  G L  + G+VE+A +++   L    +N   L   A +  ++  +  + E Y++AL
Sbjct: 48  TWLAIGSLAESLGDVEKALASYDSALRHSPNNPEILTKLANMYRSKDVFFKAAELYEQAL 107

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL-QLDPENVEALV-ALAVMDLQANEA 202
             HP   G     +G C   L  L +A  A+QRAL  LD  NV  L   + ++    +  
Sbjct: 108 NFHPEN-GETWGLLGHCYLMLDDLQRAYAAYQRALYYLDNPNVPKLWHGIGIL---YDRY 163

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 262
             +    E   R  E+ P      N+                              KS+ 
Sbjct: 164 GSLEYAEEAFVRVLELDP------NF-----------------------------DKSNE 188

Query: 263 -YYNLARSYHSKGDYEKA--GLYYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSAL 317
            Y+ L   Y  +G  + A     Y+ +    N PH    P  ++ +G V  +  D+  A 
Sbjct: 189 IYFRLGIIYKHQGKLQSALECFQYILT----NPPHPLTQPDVWFQIGSVLEQQKDWNGAK 244

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQL--------GQIEKAQEL------LRKAAKIDPR 363
             +EKVL++ P + + L+ LG +Y Q          Q    Q+L      L ++ +ID  
Sbjct: 245 EAYEKVLQVNPQHAKVLQQLGCLYSQAEPAPSGNSNQQPFQQDLNIALKYLLQSLEIDQS 304

Query: 364 DAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
           DA ++  LG + +I  D  AA +AF+ A     +           +IGV++++  ++  A
Sbjct: 305 DAHSWYYLGRVHMIRGDFNAAYEAFQQAVNRDSRNP-----TFWCSIGVLYYQISQYRDA 359

Query: 423 HQSFKDAL 430
             ++  A+
Sbjct: 360 LDAYTRAI 367



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 15/213 (7%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +  +G +   LGD   AL +++  L   P+N E L  L ++Y       KA EL  +A  
Sbjct: 49  WLAIGSLAESLGDVEKALASYDSALRHSPNNPEILTKLANMYRSKDVFFKAAELYEQALN 108

Query: 360 IDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
             P + + +  LG   L+  D   A  A++  R L       VP ++ + IG+++   G 
Sbjct: 109 FHPENGETWGLLGHCYLMLDDLQRAYAAYQ--RALYYLDNPNVP-KLWHGIGILYDRYGS 165

Query: 419 FESAHQSFKDALGDGIWLTLLDSKTKTY----VIDASASMLQFKDMQLFHRFENDGNHVE 474
            E A ++F   L         D   + Y    +I      LQ   ++ F     +  H  
Sbjct: 166 LEYAEEAFVRVLELD---PNFDKSNEIYFRLGIIYKHQGKLQ-SALECFQYILTNPPH-- 219

Query: 475 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 507
            P  +  V F +  +LEQ  D   A   Y  +L
Sbjct: 220 -PLTQPDVWFQIGSVLEQQKDWNGAKEAYEKVL 251



 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 19/164 (11%)

Query: 33  VRYERIAILNALGVYYTYLGKIET---KQREKEEHFILATQYYNKASRIDMHEPSTWVGK 89
           V  +   +L  LG  Y+      +    Q+  ++   +A +Y  ++  ID  +  +W   
Sbjct: 253 VNPQHAKVLQQLGCLYSQAEPAPSGNSNQQPFQQDLNIALKYLLQSLEIDQSDAHSWYYL 312

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G++ + +G+   A  AF+  +  D  N         + +   +Y D+L+ Y RA++++P 
Sbjct: 313 GRVHMIRGDFNAAYEAFQQAVNRDSRNPTFWCSIGVLYYQISQYRDALDAYTRAIRLNPY 372

Query: 150 CPGAIRLGIGLCRYKLG--------QLGKARQAFQRALQLDPEN 185
                   I    Y LG        Q+  A  A+++A +LDP N
Sbjct: 373 --------ISEVWYDLGTLYETCNNQISDALDAYRQAERLDPSN 408


>gi|431914414|gb|ELK15671.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Pteropus alecto]
          Length = 1046

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456


>gi|405973294|gb|EKC38016.1| Bardet-Biedl syndrome 4 protein [Crassostrea gigas]
          Length = 583

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 19/229 (8%)

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS-- 262
           I++ +E  Q    + P  A  L  +A   F   +H    +L   A  ++      +H+  
Sbjct: 107 IQESLELFQTCTLLNPQSADNLKQVARSLFLLARHKAAIELYNEATKLSERDWEIAHNQG 166

Query: 263 -YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
             Y   R Y    D     L +        K HE    Y  LG++ L  G+  +A+  ++
Sbjct: 167 VCYMYLREYKMAKDCLSQALSF--------KRHEIS--YVMLGKIHLMEGNIEAAIEIYK 216

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDT 380
           + +E  P+N + L  LG +Y+Q+GQ ++A E L  A   DP   +A +  G ++ +  D 
Sbjct: 217 QAVEYSPENPDMLTTLGLLYMQVGQYQRAFENLGNAMTYDPSHVKAIMSAGSMMQTHGDF 276

Query: 381 GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
             AL+ ++ A      A  E P  + NNIG+  F K ++ +A    K A
Sbjct: 277 DVALNKYRIAAV----ATPESP-PLWNNIGMAFFGKKKYVAAISCLKRA 320


>gi|363732735|ref|XP_003641145.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Gallus gallus]
          Length = 1045

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 194/478 (40%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 320

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL   ++     + +        AS+
Sbjct: 321 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKALE--VFPEFAAAHSNL------ASV 370

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
           LQ +  +L     +    + +         N+   L+++ D   A   Y   +     + 
Sbjct: 371 LQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 429

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 430 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487


>gi|377657074|gb|AFB74087.1| O-linked N-acetylglucosamine transferase [Bubalus bubalis]
          Length = 1046

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456


>gi|148360062|ref|YP_001251269.1| methyltransferase [Legionella pneumophila str. Corby]
 gi|296108117|ref|YP_003619818.1| hypothetical protein lpa_03621 [Legionella pneumophila 2300/99
           Alcoy]
 gi|148281835|gb|ABQ55923.1| methyltransferase [Legionella pneumophila str. Corby]
 gi|295650019|gb|ADG25866.1| Hypothetical protein lpa_03621 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 577

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 149/367 (40%), Gaps = 29/367 (7%)

Query: 20  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 76
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAR 66

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILH 185

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           L+ N  +   +   K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPDNLEYL---YNSGVAQMALGHLNEA 296

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALVINPDDV-----VSRHML 351

Query: 377 SSDTGAA 383
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|94971629|ref|YP_593677.1| hypothetical protein Acid345_4603 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553679|gb|ABF43603.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 722

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 159/360 (44%), Gaps = 42/360 (11%)

Query: 125 CVEFNRGRYSD-SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
              + R  Y++ ++E Y+ A+   PS    +  G+    ++ G++  A    Q  L+ DP
Sbjct: 87  VATYGRAEYANKAIEEYRAAITADPSS-DYLNAGLADLYWRTGRIRDAVLEAQEILKRDP 145

Query: 184 ENVEA--------LVALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           +NV+A        L +L  M    N++  + R  +E+ +   ++ P        L   + 
Sbjct: 146 KNVDAHRLLGRIYLRSLGDMQSGNNQSRDMQRLAIEQYEEIVKLDPTSVEDHLLLGRLYS 205

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
           ++      E+  +TA+ +    P    +   LA  Y  +GD +KA    ++++ + ++  
Sbjct: 206 YSNDLTKAEKEFKTAVQIQ---PDSEEAVTMLAYLYTQEGDTKKAQ-EVLSNIPDDDRSA 261

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           +    Y  LG    +  D++ A+  + K + +  +N ++++ L    +  GQ++ A E  
Sbjct: 262 KL---YSTLGYTYEEQKDYKKAIEAYRKAVMLDKENLDSVRGLAQNLLNDGQLDAALEQY 318

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGV 411
           +     DP DAQ++  + E  I    G   AALDA K A  L++ + +E+P     N+ V
Sbjct: 319 KIIVDQDPSDAQSYQHIAE--IDRRNGKFEAALDALKKASALVQDS-QEIPY----NMAV 371

Query: 412 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
           I+  +G +E A  + +  L            TKT   DAS S     +  +F   E  GN
Sbjct: 372 IYEGQGRYEDAINTIQQLL------------TKTDKPDASYSSADRSNRSIF--LERLGN 417



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 397
           G IY +  + E+A+E  RK    DP++A A   LG +L  +D G  L+    A  +L+KA
Sbjct: 557 GSIYEREKKFEQAEEAFRKVINADPKNAGALNYLGYML--ADRGTRLE---EALGMLRKA 611

Query: 398 GEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDA 429
            +  P     L+++G  +F+ G +E A ++ + A
Sbjct: 612 VQMEPQNGAYLDSLGWAYFKMGNYEQAEENLRKA 645


>gi|3914191|sp|P56558.1|OGT1_RAT RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|1931579|gb|AAC53121.1| O-GlcNAc transferase, p110 subunit [Rattus norvegicus]
          Length = 1036

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446


>gi|327287040|ref|XP_003228237.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 3 [Anolis carolinensis]
          Length = 1046

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L     + A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYKRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 190/478 (39%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  ++A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 320

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 321 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 372

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 373 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 429

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 430 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487


>gi|74316213|ref|YP_313953.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74055708|gb|AAZ96148.1| TPR repeat [Thiobacillus denitrificans ATCC 25259]
          Length = 931

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 137/589 (23%), Positives = 239/589 (40%), Gaps = 104/589 (17%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV-H 147
           +G+ LL + ++E+A + F+   +A   N P   G +      G  + + ++ +RAL++ H
Sbjct: 141 RGEALLNQRKLEEACNLFQQSYDASPGNPPTYWGLSRCALATGDAAKARDWLERALKLEH 200

Query: 148 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA----- 202
                 I LG      K     KA  A+ +A++++P N++AL +L  + ++A +      
Sbjct: 201 KRARTWIHLGNLELAGK--DTAKALAAYSKAVKIEPNNLDALQSLVAIHVKAGDTQRARE 258

Query: 203 --AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL-VEQLTETALAVTNHGPTK 259
             A IRK   K  RA           +YL     ++ + F       + AL V+   P  
Sbjct: 259 YLAVIRKLAPKSTRA-----------HYLEASIAYSEKKFAEANAAIQEALKVS---PDH 304

Query: 260 SHSYYNLARSYHSKGDYEKA----------------GLYYMASV----KEINKPHEFIFP 299
             S      S H+ G Y++A                GL  +A+     K+ +K    + P
Sbjct: 305 VPSLMLAGMSAHALGSYQEAETYFKRFLLRVPGHAEGLKMLATTQIKSKQFDKALVTLAP 364

Query: 300 YY--------GL---GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
           +         GL   G+ Q+  G+   A   FE+ L + P N      LG   +  G  +
Sbjct: 365 FLAPGVRDAQGLALAGEAQMANGNPSQAAALFERALALEPGNVTIRTQLGLSQLAAGNTQ 424

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLN 407
            A + L  A++     +QA   L    +S  D   AL A  T    L+K G+    ++ +
Sbjct: 425 DAIDELTDASQ-HSSGSQADTLLAVAYLSRKDYDRALAALAT----LQKKGD-ASAKIHH 478

Query: 408 NIGVIHFEKGEFESAHQSFKDALG-DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRF 466
             G  +  K +  +A ++F+ AL  D  +   + S  +   +D + +      M+L    
Sbjct: 479 LAGQAYLGKNDKLAARRNFEQALAADAAFFPAVASLAQ---LDVAENKADAARMRLERAL 535

Query: 467 ENDGNHVELPWNKVTVLFNLARL-------------LEQIHDTVAASVLYRLILFKYQDY 513
             D N       +V  +  L+R+             LE+       ++  R+ L ++   
Sbjct: 536 AQDKN-------RVAAMLALSRMAARNGQEQASIDWLEKAARADGKAIQPRIELVRH--- 585

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-- 571
              YL       ARN  Q ++ L NEA++ N  +P AL++LG ++L  DD   +  TF  
Sbjct: 586 ---YL-------ARNEGQKALALANEAVRANPDHPAALNLLGTVQLALDDKASSASTFSR 635

Query: 572 --RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKEL 618
             R    + +G    A + L +     A RN   A +L   HL+  + L
Sbjct: 636 LTRETRQSPEGFVRLAQVQLADGKLDEARRNLLHALELAPGHLKSQEAL 684


>gi|327287038|ref|XP_003228236.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Anolis carolinensis]
          Length = 1036

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L     + A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYKRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 190/478 (39%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  ++A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 310

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 311 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 362

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 363 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 419

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477


>gi|54298485|ref|YP_124854.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris]
 gi|397668165|ref|YP_006509702.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
 gi|53752270|emb|CAH13702.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris]
 gi|395131576|emb|CCD09863.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
          Length = 577

 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 149/367 (40%), Gaps = 29/367 (7%)

Query: 20  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 76
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAK 66

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 137 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 196
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPKHREAQFYLGILH 185

Query: 197 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 256
           L+ N  +   +   K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPNNLEYL---YNSGVAQMALGHLNEA 296

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALVINPDDV-----VSRHML 351

Query: 377 SSDTGAA 383
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|198434517|ref|XP_002131769.1| PREDICTED: similar to O-linked N-acetylglucosamine transferase
           [Ciona intestinalis]
          Length = 1042

 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 136/332 (40%), Gaps = 48/332 (14%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA ++D +    ++  G +L      ++A 
Sbjct: 196 FAVAWSNLGCVFNSQGE----IWLAIHHFEKAVKLDPNFLDAYINLGNVLKEARIFDRAV 251

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           +A+   L    ++       ACV + +G    +++ YKRA+++ P  P A    +     
Sbjct: 252 AAYLRALNLSPNHAVVHGNLACVYYEQGLVDLAIDTYKRAIELQPHFPDA-YCNLANALK 310

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + G++G A + + +AL+L P + ++L  LA +     E   I + +    +A E++P  A
Sbjct: 311 EKGKVGDAEECYNKALRLCPTHADSLNNLANIK---REQGLIEEAIALYSKALEVFPEFA 367

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A                                   HS  NLA     +G  ++A L+Y
Sbjct: 368 AA-----------------------------------HS--NLASVLQQQGKLQEALLHY 390

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++    P  F   Y  +G    ++ D + A+  + + ++I P   +    L  ++  
Sbjct: 391 KEAIRI--SP-TFADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPAFADAHSNLASVHKD 447

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            G I  A +  R A K+ P    A+ +L   L
Sbjct: 448 SGSIPAAIQSYRTALKLKPDFPDAYCNLAHCL 479



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 107/502 (21%), Positives = 195/502 (38%), Gaps = 76/502 (15%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      + + + DN   LL  + + F   R   S  F K A++ +P    A   
Sbjct: 41  GDYENAERHCMQLWQQEPDNTGVLLLLSSIHFQCRRLDKSAYFSKHAIKTNPMLAEAYS- 99

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A   ++ A++L P+ ++  + LA   + A +  G    +     A 
Sbjct: 100 NLGNVYKERGQLQEALDHYRHAVRLKPDFIDGYINLAAALVTAGDLEG---AVHAYFSAL 156

Query: 217 EIYP--YCAMALNYLANHFFFTGQ------HFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
           +I P  YC  +   L N     G+       +L    T+T  AV         ++ NL  
Sbjct: 157 QINPELYCVRS--DLGNLLKALGRLEEAKACYLKAIETQTNFAV---------AWSNLGC 205

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
            ++S+G+   A  ++  +VK    P+ F+  Y  LG V  +   F  A+  + + L + P
Sbjct: 206 VFNSQGEIWLAIHHFEKAVKL--DPN-FLDAYINLGNVLKEARIFDRAVAAYLRALNLSP 262

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAF 387
           ++      L  +Y + G ++ A +  ++A ++ P    A+ +L   L      G A + +
Sbjct: 263 NHAVVHGNLACVYYEQGLVDLAIDTYKRAIELQPHFPDAYCNLANALKEKGKVGDAEECY 322

Query: 388 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 447
             A  L     +      LNN+  I  E+G  E A   +  AL                 
Sbjct: 323 NKALRLCPTHADS-----LNNLANIKREQGLIEEAIALYSKAL----------------- 360

Query: 448 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 507
                        ++F  F                  NLA +L+Q      A + Y+  +
Sbjct: 361 -------------EVFPEF-------------AAAHSNLASVLQQQGKLQEALLHYKEAI 394

Query: 508 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKA 567
                + DAY  +    K   ++Q +I+    A+++N  + +A S L  +   +     A
Sbjct: 395 RISPTFADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPAFADAHSNLASVHKDSGSIPAA 454

Query: 568 KETFRAASD-ATDGKDSYATLS 588
            +++R A     D  D+Y  L+
Sbjct: 455 IQSYRTALKLKPDFPDAYCNLA 476



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 83/391 (21%), Positives = 164/391 (41%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A  +Y  A R+       ++     L+  G++E A  A+ 
Sbjct: 98  YSNLGNVYKERGQLQE----ALDHYRHAVRLKPDFIDGYINLAAALVTAGDLEGAVHAYF 153

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + +   V + LG        GR  ++   Y +A++   +   A    +G      
Sbjct: 154 SALQINPELYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQTNFAVAWS-NLGCVFNSQ 210

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A++LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 211 GEIWLAIHHFEKAVKLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNHAVV 267

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L     + A+ +  H P    +Y NLA +   KG    A   Y  
Sbjct: 268 HGNLACVYYEQGLVDLAIDTYKRAIELQPHFPD---AYCNLANALKEKGKVGDAEECYNK 324

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G    A+  + K LE++P+       L  +
Sbjct: 325 ALR--------LCPTHADSLNNLANIKREQGLIEEAIALYSKALEVFPEFAAAHSNLASV 376

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   A+  +  A  +      
Sbjct: 377 LQQQGKLQEALLHYKEAIRISPTFADAYSNMGNTLKEMQDVQGAIQCYTRAIQI-----N 431

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  +H + G   +A QS++ AL
Sbjct: 432 PAFADAHSNLASVHKDSGSIPAAIQSYRTAL 462



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 112/287 (39%), Gaps = 48/287 (16%)

Query: 512 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY-------PNALSMLGDLELKNDDW 564
           D++D Y+ LAA      +L+ ++     AL++N +         N L  LG LE     +
Sbjct: 127 DFIDGYINLAAALVTAGDLEGAVHAYFSALQINPELYCVRSDLGNLLKALGRLEEAKACY 186

Query: 565 VKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIV 624
           +KA ET          + ++A      W+    + N +    L   H EKA +L    + 
Sbjct: 187 LKAIET----------QTNFAVA----WSNLGCVFNSQGEIWLAIHHFEKAVKLDPNFLD 232

Query: 625 QHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 684
            +  NL      G VL E   FD +   + +    +     V       NLA VY+ QG 
Sbjct: 233 AYI-NL------GNVLKEARIFDRAVAAYLRALNLSPNHAVVHG-----NLACVYYEQGL 280

Query: 685 FALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFD 744
             LA+  Y+  +    +  DA     LA    E  +  D ++   +A+ L P++      
Sbjct: 281 VDLAIDTYKRAIELQPHFPDA--YCNLANALKEKGKVGDAEECYNKALRLCPTHAD---- 334

Query: 745 AGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAA-SNL 790
                   S + L   +R    +   +A    A+ VF   +AA SNL
Sbjct: 335 --------SLNNLANIKREQGLIEEAIALYSKALEVFPEFAAAHSNL 373


>gi|327287036|ref|XP_003228235.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Anolis carolinensis]
          Length = 1066

 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L     + A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYKRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 190/478 (39%), Gaps = 27/478 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  ++A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 320

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 321 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 372

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 373 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 429

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 572
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 430 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487


>gi|113477431|ref|YP_723492.1| hypothetical protein Tery_3996 [Trichodesmium erythraeum IMS101]
 gi|110168479|gb|ABG53019.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1694

 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 135/318 (42%), Gaps = 54/318 (16%)

Query: 68   ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
            A   Y KA  I  D HE   W  KG  L+     E+A +A++  LE   D   A   +  
Sbjct: 1333 AVAAYEKALEIKPDFHE--AWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGN 1390

Query: 126  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
               N  RY +++  Y++AL++ P    A     G+   KL +  +A  AF++AL++ P+ 
Sbjct: 1391 ALGNLERYEEAVAAYEKALEIKPDFHEAWH-NKGIALGKLERYEEAVAAFEKALEIKPDF 1449

Query: 186  VEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
             EA      A++ L+  E A     +   ++A EI P    A       +F  G   +  
Sbjct: 1450 HEAWHNKGNALIKLERYEEA-----VAAYEKALEIKPDFHEA-------WFLKGNALIKL 1497

Query: 244  QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            +  E A+A                        YEKA         EI KP +F   ++  
Sbjct: 1498 ERYEEAVAA-----------------------YEKA--------LEI-KP-DFHEAWFLK 1524

Query: 304  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
            G   +KL  +  A+  +EK LEI PD  E     G+  ++L + E+A     KA +I P 
Sbjct: 1525 GNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPD 1584

Query: 364  DAQAFIDLGELLISSDTG 381
            D  + I+LG  L+  + G
Sbjct: 1585 DEYSIINLG--LVKYEMG 1600



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 145/322 (45%), Gaps = 36/322 (11%)

Query: 68   ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
            A   Y KA  I  D HE   W  KG  L      E+A +A++  LE   D   A   +  
Sbjct: 1061 AVAAYEKALEIKPDFHE--AWHNKGIALENLERYEEAVAAYEKALEIKPDYHYAWHNKGD 1118

Query: 126  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
               N  RY +++  Y++AL++ P    A   G G+   KL +  +A  AF++AL++ P+ 
Sbjct: 1119 ALENLERYEEAVAAYEKALEIKPDYHYAWN-GKGIALIKLERYEEAVAAFEKALEIKPDF 1177

Query: 186  VEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
             +A  L   A+ +L+  E A     +   ++A EI P    A N          +   +E
Sbjct: 1178 HDAWFLKGNALGNLERYEEA-----VAAFEKALEIKPDFHEAWN---------NKGIALE 1223

Query: 244  QLT--ETALAVTNHGPTKSHSYYNLARSYHSKGD-------YEKAGLYYMASVKEINKPH 294
            +L   E A+A           ++    ++H+KG+       YE+A   Y  ++ EI KP 
Sbjct: 1224 KLERYEEAVAAFEKALEIKPDFH---EAWHNKGNALIKLERYEEAVAAYEKAL-EI-KP- 1277

Query: 295  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
            +F   ++  G   +KL  +  A+  +EK LEI PD  E     G+  ++L + E+A    
Sbjct: 1278 DFHDAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAY 1337

Query: 355  RKAAKIDPRDAQAFIDLGELLI 376
             KA +I P   +A+   G  LI
Sbjct: 1338 EKALEIKPDFHEAWFLKGNALI 1359



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 157/375 (41%), Gaps = 38/375 (10%)

Query: 68  ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A   Y KA  I  D HE   W  KG  L      E+A +A++  LE   D   A   +  
Sbjct: 449 AVAAYEKALEIKPDFHE--AWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGN 506

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
              N  RY +++  Y++AL++ P    A  L  G     L +  +A  A+++AL++ P+ 
Sbjct: 507 ALGNLERYEEAVAAYEKALEIKPDFHDAWFLK-GNALGNLERYEEAVAAYEKALEIKPDF 565

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMAL----NYLANHFFFTGQ 238
            EA        L+ N    + +  E +   ++A EI P    A     N L N   +   
Sbjct: 566 HEAWF------LKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEA 619

Query: 239 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
               E+  E      +    K ++  NL R   +   YEKA         EI KP +F +
Sbjct: 620 VAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKA--------LEI-KP-DFHY 669

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            ++  G     L  +  A+  FEK LEI PD  E     G    +L + E+A     KA 
Sbjct: 670 AWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKAL 729

Query: 359 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEK 416
           +I P   +A+ + G  L        L+ ++ A    +KA E  P   E  NN G I  EK
Sbjct: 730 EIKPDFHEAWNNKGIAL------EKLERYEEAVAAFEKALEIKPDFHEAWNNKG-IALEK 782

Query: 417 GE-FESAHQSFKDAL 430
            E +E A  +F+ AL
Sbjct: 783 LERYEEAVAAFEKAL 797



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 124/294 (42%), Gaps = 18/294 (6%)

Query: 73  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 132
           ++A +I+ ++ + W  KG  L+     E+A +A++  LE   D   A   +     N  R
Sbjct: 250 DEALKIEPNDYNAWNNKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLER 309

Query: 133 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV-- 190
           Y +++  Y++AL++ P    A  L  G+    L +  +A  A+++AL++ P+  EA    
Sbjct: 310 YEEAVAAYEKALEIKPDFHEAWFLK-GIALINLERYEEAVAAYEKALEIKPDFHEAWFLK 368

Query: 191 --ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
             AL  ++      A   K +E      E +    +AL  L  +      +   E+  E 
Sbjct: 369 GNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAY---EKALEI 425

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
                     K ++  NL R   +   YEKA         EI KP +F   ++  G    
Sbjct: 426 KPDFHEAWFLKGNALGNLERYEEAVAAYEKA--------LEI-KP-DFHEAWFLKGNALG 475

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            L  +  A+  +EK LEI PD  +     G+    L + E+A     KA +I P
Sbjct: 476 NLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKP 529



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 147/329 (44%), Gaps = 42/329 (12%)

Query: 60   EKEEHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 117
            EK E +  A   + KA  I  D HE   W  KG  L      E+A +AF+  LE   D  
Sbjct: 747  EKLERYEEAVAAFEKALEIKPDFHE--AWNNKGIALEKLERYEEAVAAFEKALEIKPDFH 804

Query: 118  PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 177
             A   +        RY +++  +++AL++ P    A  L  G     L +  +A  A+++
Sbjct: 805  EAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLK-GNALGNLERYEEAVAAYEK 863

Query: 178  ALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
            AL++ P+  EA     +A+ +L+  E A     +   ++A EI P    A N        
Sbjct: 864  ALEIKPDFHEAWHNKGIALENLERYEEA-----VAAYEKALEIKPDFHEAWN-------- 910

Query: 236  TGQHFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGD-------YEKAGLYYMAS 286
              +   +E+L   E A+A           ++    ++H+KG+       YE+A   Y  +
Sbjct: 911  -NKGIALEKLERYEEAVAAFEKALEIKPDFH---EAWHNKGNALGNLERYEEAVAAYEKA 966

Query: 287  VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 346
            + EI KP +F + ++  G    KL  +  A+  +EK LEI PD  E     G   + LG+
Sbjct: 967  L-EI-KP-DFHYAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKG---IALGK 1020

Query: 347  IEKAQELL---RKAAKIDPRDAQAFIDLG 372
            +E+ +E +    KA +I P   +A+ + G
Sbjct: 1021 LERYEEAVAAYEKALEIKPDFHEAWHNKG 1049



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 125/312 (40%), Gaps = 18/312 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y KA  I       W  KG  L      E+A +AF+  LE   D   A   +    
Sbjct: 653 AVAAYEKALEIKPDFHYAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIAL 712

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
               RY +++  +++AL++ P    A     G+   KL +  +A  AF++AL++ P+  E
Sbjct: 713 EKLERYEEAVAAFEKALEIKPDFHEAWN-NKGIALEKLERYEEAVAAFEKALEIKPDFHE 771

Query: 188 AL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           A     +AL  ++      A   K +E      E +    +AL  L     +       E
Sbjct: 772 AWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER---YEEAVAAFE 828

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           +  E      +    K ++  NL R   +   YEKA         EI KP +F   ++  
Sbjct: 829 KALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKA--------LEI-KP-DFHEAWHNK 878

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G     L  +  A+  +EK LEI PD  E     G    +L + E+A     KA +I P 
Sbjct: 879 GIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPD 938

Query: 364 DAQAFIDLGELL 375
             +A+ + G  L
Sbjct: 939 FHEAWHNKGNAL 950



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 143/343 (41%), Gaps = 52/343 (15%)

Query: 51   LGKIETKQREKEEHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKI 108
            LGK+E  +         A   Y KA  I  D HE   W  KG  L      E+A +A++ 
Sbjct: 984  LGKLERYEE--------AVAAYEKALEIKPDFHE--AWFLKGIALGKLERYEEAVAAYEK 1033

Query: 109  VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
             LE   D   A   +     N  RY +++  Y++AL++ P    A     G+    L + 
Sbjct: 1034 ALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWH-NKGIALENLERY 1092

Query: 169  GKARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
             +A  A+++AL++ P+   A      A+ +L+  E A     +   ++A EI P      
Sbjct: 1093 EEAVAAYEKALEIKPDYHYAWHNKGDALENLERYEEA-----VAAYEKALEIKP------ 1141

Query: 227  NYLANHFFFTGQHFLVEQLT---------ETALAVT----NHGPTKSHSYYNLARSYHSK 273
            +Y   H+ + G+   + +L          E AL +     +    K ++  NL R   + 
Sbjct: 1142 DY---HYAWNGKGIALIKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAV 1198

Query: 274  GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
              +EKA         EI KP +F   +   G    KL  +  A+  FEK LEI PD  E 
Sbjct: 1199 AAFEKA--------LEI-KP-DFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEA 1248

Query: 334  LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
                G+  ++L + E+A     KA +I P    A+   G  LI
Sbjct: 1249 WHNKGNALIKLERYEEAVAAYEKALEIKPDFHDAWFLKGNALI 1291



 Score = 46.2 bits (108), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 130/314 (41%), Gaps = 28/314 (8%)

Query: 68  ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A   Y KA  I  D H+   W  KG  L      E+A +A++  LE   D   A   +  
Sbjct: 517 AVAAYEKALEIKPDFHD--AWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGN 574

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
              N  RY +++  Y++AL++ P    A  L  G     L +  +A  A+++AL++ P+ 
Sbjct: 575 ALGNLERYEEAVAAYEKALEIKPDFHEAWFLK-GNALGNLERYEEAVAAYEKALEIKPDF 633

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
            +A        L+ N    + +  E +   ++A EI P    A       +F  G     
Sbjct: 634 HDAWF------LKGNALGNLERYEEAVAAYEKALEIKPDFHYA-------WFLKGNALGN 680

Query: 243 EQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
            +  E A+A         P    ++ N   +      YE+A   +  ++ EI KP +F  
Sbjct: 681 LERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKAL-EI-KP-DFHE 737

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            +   G    KL  +  A+  FEK LEI PD  E     G    +L + E+A     KA 
Sbjct: 738 AWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKAL 797

Query: 359 KIDPRDAQAFIDLG 372
           +I P   +A+ + G
Sbjct: 798 EIKPDFHEAWNNKG 811



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 128/305 (41%), Gaps = 30/305 (9%)

Query: 68  ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 125
           A   Y KA  I  D HE   W  KG  L      E+A +A++  LE   D   A   +  
Sbjct: 551 AVAAYEKALEIKPDFHE--AWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGN 608

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
              N  RY +++  Y++AL++ P    A  L  G     L +  +A  A+++AL++ P+ 
Sbjct: 609 ALGNLERYEEAVAAYEKALEIKPDFHDAWFLK-GNALGNLERYEEAVAAYEKALEIKPDF 667

Query: 186 VEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
             A  L   A+ +L+  E A     +   ++A EI P    A N          +   +E
Sbjct: 668 HYAWFLKGNALGNLERYEEA-----VAAFEKALEIKPDFHEAWN---------NKGIALE 713

Query: 244 QLT--ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
           +L   E A+A         P    ++ N   +      YE+A   +  ++ EI KP +F 
Sbjct: 714 KLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKAL-EI-KP-DFH 770

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             +   G    KL  +  A+  FEK LEI PD  E     G    +L + E+A     KA
Sbjct: 771 EAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKA 830

Query: 358 AKIDP 362
            +I P
Sbjct: 831 LEIKP 835


>gi|163784399|ref|ZP_02179288.1| hypothetical protein HG1285_04998 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880330|gb|EDP73945.1| hypothetical protein HG1285_04998 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 202

 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y+ +G   L  G+   A+ N  +   I P + + L ALG  Y ++G+++KAQE   KA +
Sbjct: 37  YFKMGVSYLNSGNVAEAIYNLNQAYAIKPKDPDILNALGIAYTKVGELDKAQEYFLKAIQ 96

Query: 360 IDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 418
            +P  A+++++LG LL    D G+A + FK A   +K    +   +   N+ +++ + G 
Sbjct: 97  TNPEKAESYVNLGILLAKKKDYGSAKNYFKKA---IKNPNYKNKEKAYYNLALVYLKLGN 153

Query: 419 FESAHQSFKDALG 431
            +   +S K A+ 
Sbjct: 154 LKRYEESLKKAIA 166



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 129 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           N G  ++++    +A  + P  P  +   +G+   K+G+L KA++ F +A+Q +PE  E+
Sbjct: 46  NSGNVAEAIYNLNQAYAIKPKDPDILN-ALGIAYTKVGELDKAQEYFLKAIQTNPEKAES 104

Query: 189 LVALAVM 195
            V L ++
Sbjct: 105 YVNLGIL 111


>gi|390566665|ref|ZP_10247021.1| TPR repeat-containing protein [Burkholderia terrae BS001]
 gi|389941374|gb|EIN03147.1| TPR repeat-containing protein [Burkholderia terrae BS001]
          Length = 615

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 142/329 (43%), Gaps = 24/329 (7%)

Query: 97  GEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
           G ++ A   ++  LE D  +V AL  LG  C    +G++ ++ +  +RA  + P    A+
Sbjct: 15  GRLDDAERDYRATLELDPVHVDALHLLGVLC--HQQGQHEEAADLVRRAADLRPQD-AAL 71

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK-GMEKMQ 213
           +L +G     LG+L +A + F+ AL L P    A   L      A   AG  +  ++  Q
Sbjct: 72  QLNLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLG----NAYALAGRHEDAVDAFQ 127

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
           ++  + P  A +   L N     G+H         AL +    P  + ++ N+  + ++ 
Sbjct: 128 KSLRLQPLDASSHVNLGNALHALGRHREAVDSFRRALELR---PGHAGAHNNIGMALNAL 184

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G   +A  ++ A+ K   +   F+   + LG      G    A+  FE VL +  +    
Sbjct: 185 GSAREAIAHFRAAFKIEPR---FVAARFNLGNTLDATGQHHEAVAEFEAVLTLQTNLPPA 241

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 393
           L  LG+    LG+ E+A+    +A  +DP  A A++ LG          AL A+  A   
Sbjct: 242 LFGLGNALASLGRHEEARPRFERAVGLDPNFALAWLSLGA------AHHALGAYDAALRA 295

Query: 394 LKKAGEEVPIEVLN--NIGVIHFEKGEFE 420
             +A    P + +   N GV    +G+F+
Sbjct: 296 FDQALRLRPDQAIAHMNRGVTLLTRGDFK 324



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS- 377
           ++   LE+ P + + L  LG +  Q GQ E+A +L+R+AA + P+DA   ++LG  L + 
Sbjct: 23  DYRATLELDPVHVDALHLLGVLCHQQGQHEEAADLVRRAADLRPQDAALQLNLGNALKAL 82

Query: 378 SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                A++ F+ A TL        P+    N+G  +   G  E A  +F+ +L
Sbjct: 83  GRLDQAIERFRNALTL----APTFPM-AHYNLGNAYALAGRHEDAVDAFQKSL 130



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 42  NALGVYYTYLGKIETKQREKEEHFILATQYYNK--ASRIDMHEPSTWVGKGQLLLAKGEV 99
           N +G+    LG      RE   HF  A +   +  A+R ++         G  L A G+ 
Sbjct: 175 NNIGMALNALGS----AREAIAHFRAAFKIEPRFVAARFNL---------GNTLDATGQH 221

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            +A + F+ VL    +  PAL G      + GR+ ++   ++RA+ + P+   A  L +G
Sbjct: 222 HEAVAEFEAVLTLQTNLPPALFGLGNALASLGRHEEARPRFERAVGLDPNFALAW-LSLG 280

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEA 188
              + LG    A +AF +AL+L P+   A
Sbjct: 281 AAHHALGAYDAALRAFDQALRLRPDQAIA 309


>gi|427722550|ref|YP_007069827.1| hypothetical protein Lepto7376_0567 [Leptolyngbya sp. PCC 7376]
 gi|427354270|gb|AFY36993.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 493

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 143/340 (42%), Gaps = 29/340 (8%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN A  +       W  +G  L   G+ E+A  ++   L+ + D+  +   +  +     
Sbjct: 93  YNHAVELRADSVPAWNNRGNTLKVLGKYEEAIDSYDQALKLEPDDYLSWDNKGDLLKELK 152

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           +Y ++++ Y +AL + P+    I    GL    L Q   A   + +AL+++  +   L A
Sbjct: 153 QYHEAIQSYSKALVIKPN-SAEIWYKRGLVFELLSQDNDALMNYSKALEINQNSPHILCA 211

Query: 192 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 251
              + ++       ++ +    RA E+   C  A         ++ + FL+EQL +   A
Sbjct: 212 RGSILVRLER---FQEALMCFNRAIELKADCVEA---------WSHKGFLLEQLKKIEDA 259

Query: 252 VTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-- 303
           + ++G      P +   +Y+    +  +  Y++ GL+    V  +N+ H     Y  L  
Sbjct: 260 IFSYGQALAVNPNQEILWYHRGNLFLRQKQYQR-GLHSYDEVLRLNREH-----YQSLNN 313

Query: 304 -GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G    KLGD   A   F+KVLEI P         G I   +G  ++A     KA K++P
Sbjct: 314 KGVSLYKLGDVHGAFKCFQKVLEINPYAFSAWNNQGQICKAIGDYQEAIICYDKALKVEP 373

Query: 363 RDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEV 401
           + ++ +   G  L        A+++F+ A  L K   E +
Sbjct: 374 KQSKIWSKRGLCLAKLGHYEEAINSFQQAIQLDKSYAEAL 413



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y++  R++     +   KG  L   G+V  A   F+ VLE +     A   Q  +    G
Sbjct: 297 YDEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVLEINPYAFSAWNNQGQICKAIG 356

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            Y +++  Y +AL+V P     I    GLC  KLG   +A  +FQ+A+QLD    EAL A
Sbjct: 357 DYQEAIICYDKALKVEPK-QSKIWSKRGLCLAKLGHYEEAINSFQQAIQLDKSYAEALYA 415

Query: 192 -LAVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLVEQLTETA 249
             AV  +Q N    ++  +E + +A    P Y  +A   L  +F    +H+  E L  T 
Sbjct: 416 QAAVFAVQQN----LQLALEYLGKAISANPKYIQVA--QLDRNFECLREHYHFEALINTT 469


>gi|124023613|ref|YP_001017920.1| hypothetical protein P9303_19131 [Prochlorococcus marinus str. MIT
           9303]
 gi|123963899|gb|ABM78655.1| Hypothetical protein P9303_19131 [Prochlorococcus marinus str. MIT
           9303]
          Length = 936

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 45/339 (13%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q   KA ++D  +P      G   L  G  E A   ++  LE +    PA    A ++
Sbjct: 53  AQQSLKKAHQLDKTDPEIAKDIGNTFLNLGNQENALQWYEKALEINNKYAPAFNNIANLK 112

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD---PE 184
              G + ++++ +KRA+Q  P    A  +G       LG L +A     +AL+++   PE
Sbjct: 113 RQIGNHQEAIDLFKRAIQADPKLIQA-YIGAAASHLALGNLDQAESFATQALKINANAPE 171

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC-----------------AMALN 227
            V  ++ +   + Q  + A     +E  Q+   I P                     AL 
Sbjct: 172 -VNEILGIVFQNKQNPDQA-----IEHYQKELNINPQARNSLLNSGLLLLQNRQPTAALE 225

Query: 228 YLAN----------HFFFTGQHFLVEQLTETALAVTNHGPTKSHSY---YNLARSYHSKG 274
            LA                  H  + QL E  +        +S++    +NL       G
Sbjct: 226 SLAKASAIAPSEQCSLLLAQTHQKLGQLKEAIIEYQKLNINQSNNKLIPFNLGLCLFEIG 285

Query: 275 DYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           D  +A G + +A    I     FI  +  +G    + G  + AL   +KVLE+ PDN + 
Sbjct: 286 DNNQAIGAFQIA----IQLDETFIAAWINIGTALKREGRNQEALQATQKVLELKPDNPDA 341

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           L  LG IY  LG+++ A     K+ ++ P +  A ++LG
Sbjct: 342 LMNLGGIYQDLGKLDLALASTLKSLELKPDNPTAHMNLG 380



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 38/336 (11%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   +  A ++D    + W+  G  L  +G  ++A  A + VLE   DN  AL+    + 
Sbjct: 290 AIGAFQIAIQLDETFIAAWINIGTALKREGRNQEALQATQKVLELKPDNPDALMNLGGIY 349

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + G+   +L    ++L++ P  P A  + +G     L +L  A  +  ++L+L  +N  
Sbjct: 350 QDLGKLDLALASTLKSLELKPDNPTA-HMNLGGIYKDLAKLDLALASTLKSLELKSDNPN 408

Query: 188 ALVALA------------------VMDLQANEA------AGIRKGMEKMQ-------RAF 216
           AL+ L                    ++L+ N         GI + + ++        ++ 
Sbjct: 409 ALINLGGIYKDLAKLDLALASTLKSLELKPNNPDALMNLGGIYQDLGELDPALASTLKSL 468

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           E+ P    AL  L   +    +  L    T  +L +    PT   ++ NL   Y    D 
Sbjct: 469 ELKPDNPDALMNLGGIYQDLAKLDLALASTLKSLELNPDNPT---AHMNLGGIYQ---DL 522

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
            K  L   +++K +    +       LG +   LG+   AL +  K LE  PDN   L  
Sbjct: 523 GKLDLALASTLKSLELKSDNPSALMNLGGIYKDLGELDLALASTLKSLEFNPDNPSALMN 582

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           LG IY  LG+++ A     K+ + +P +  A ++LG
Sbjct: 583 LGGIYQDLGKLDLALASTLKSLEFNPDNPDALMNLG 618



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 150/337 (44%), Gaps = 26/337 (7%)

Query: 39  AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL--LAK 96
           A++N LG  Y  LGK++           LA     K+  +    P+  +  G +   LAK
Sbjct: 341 ALMN-LGGIYQDLGKLD-----------LALASTLKSLELKPDNPTAHMNLGGIYKDLAK 388

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
            ++  AS+   + L++D  N  AL+    +  +  +   +L    ++L++ P+ P A+ +
Sbjct: 389 LDLALASTLKSLELKSDNPN--ALINLGGIYKDLAKLDLALASTLKSLELKPNNPDAL-M 445

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G     LG+L  A  +  ++L+L P+N +AL+ L  +     + A +   +    ++ 
Sbjct: 446 NLGGIYQDLGELDPALASTLKSLELKPDNPDALMNLGGI---YQDLAKLDLALASTLKSL 502

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
           E+ P    A   L   +   G+  L    T  +L + +  P+   +  NL   Y   G+ 
Sbjct: 503 ELNPDNPTAHMNLGGIYQDLGKLDLALASTLKSLELKSDNPS---ALMNLGGIYKDLGEL 559

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
           +   L   +++K +    +       LG +   LG    AL +  K LE  PDN + L  
Sbjct: 560 D---LALASTLKSLEFNPDNPSALMNLGGIYQDLGKLDLALASTLKSLEFNPDNPDALMN 616

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 373
           LG IY  LG+++ A   L++A K +    ++ I L E
Sbjct: 617 LGGIYKDLGELDLALACLQEAKKSEKAKEESSIRLAE 653


>gi|17647755|ref|NP_523620.1| super sex combs, isoform B [Drosophila melanogaster]
 gi|24585827|ref|NP_724406.1| super sex combs, isoform A [Drosophila melanogaster]
 gi|24585829|ref|NP_724407.1| super sex combs, isoform C [Drosophila melanogaster]
 gi|6942068|gb|AAF32311.1|AF217788_1 O-glycosyltransferase [Drosophila melanogaster]
 gi|7302245|gb|AAF57338.1| super sex combs, isoform B [Drosophila melanogaster]
 gi|10728167|gb|AAG22338.1| super sex combs, isoform A [Drosophila melanogaster]
 gi|10728168|gb|AAG22339.1| super sex combs, isoform C [Drosophila melanogaster]
 gi|189182206|gb|ACD81879.1| SD06381p [Drosophila melanogaster]
          Length = 1059

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 166/388 (42%), Gaps = 28/388 (7%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 121 YSNLGNVFKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYI 176

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG-AIRLGIGLCRYK 164
             L+ + D   V + LG        GR  ++   Y +A++   +CPG A+      C + 
Sbjct: 177 TALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIE---TCPGFAVAWSNLGCVFN 231

Query: 165 L-GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
             G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A
Sbjct: 232 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNA 288

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
           +    LA  ++  G   L++   +T        P    +Y NLA +   KG  ++A   Y
Sbjct: 289 VVHGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCY 345

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q
Sbjct: 346 NTALRLCSNHADSL---NNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNLASVLQQ 402

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP 402
            G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +         
Sbjct: 403 QGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA---- 458

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +  +N+  IH + G    A QS++ AL
Sbjct: 459 -DAHSNLASIHKDSGNIPEAIQSYRTAL 485



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 184/455 (40%), Gaps = 29/455 (6%)

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
           D  N   LL  + + F   R   S +F   A++ +P    A    +G    + GQL +A 
Sbjct: 80  DSTNTGVLLLLSSIHFQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVFKERGQLQEAL 138

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--YCAMALNYLA 230
             ++RA++L P+ ++  + LA   + A +   +   ++    A +  P  YC  +   L 
Sbjct: 139 DNYRRAVRLKPDFIDGYINLAAALVAARD---MESAVQAYITALQYNPDLYCVRS--DLG 193

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
           N     G+   +E+     L      P  + ++ NL   ++++G+   A  ++    K +
Sbjct: 194 NLLKALGR---LEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFE---KAV 247

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
                F+  Y  LG V  +   F  A+  + + L + P+N      L  +Y + G I+ A
Sbjct: 248 TLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLA 307

Query: 351 QELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
            +  R+A ++ P    A+ +L   L        A D + TA  L     +      LNN+
Sbjct: 308 IDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADS-----LNNL 362

Query: 410 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 469
             I  E+G  E A + +  AL   ++     + +        AS+LQ +  +L     + 
Sbjct: 363 ANIKREQGYIEEATRLYLKAL--EVFPDFAAAHSNL------ASVLQ-QQGKLKEALMHY 413

Query: 470 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 529
              + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N
Sbjct: 414 KEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGN 473

Query: 530 LQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
           +  +I+    ALK+   +P+A   L        DW
Sbjct: 474 IPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDW 508



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 48/338 (14%)

Query: 38  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
           I       V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L    
Sbjct: 213 IETCPGFAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 268

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
             ++A +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    
Sbjct: 269 IFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDA-YCN 327

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +     + GQ+ +A   +  AL+L   + ++L  LA +     E   I +      +A E
Sbjct: 328 LANALKEKGQVKEAEDCYNTALRLCSNHADSLNNLANIK---REQGYIEEATRLYLKALE 384

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           ++P  A A                                   HS  NLA     +G  +
Sbjct: 385 VFPDFAAA-----------------------------------HS--NLASVLQQQGKLK 407

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A ++Y  +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L
Sbjct: 408 EALMHYKEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNL 464

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
             I+   G I +A +  R A K+ P    A+ +L   L
Sbjct: 465 ASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 502


>gi|189500541|ref|YP_001960011.1| hypothetical protein Cphamn1_1609 [Chlorobium phaeobacteroides BS1]
 gi|189495982|gb|ACE04530.1| TPR repeat-containing protein [Chlorobium phaeobacteroides BS1]
          Length = 194

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 3/117 (2%)

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
           ++ Y+   ++ + G+Y +AG  ++   + +     F+  Y  LG VQL +G    ALT  
Sbjct: 48  NALYSRGVAHMATGNYRQAGQDFL---RALAVDRGFLSAYKNLGFVQLTMGKEELALTTL 104

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
           EKVLEI P+  +    LG +Y+ +G+ +KA+E++ KA ++DP  A+    +    +S
Sbjct: 105 EKVLEIDPEYVDAYCLLGDVYIDIGKYDKAREMIEKALELDPDGAEPHCKMAMYCLS 161



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 1/145 (0%)

Query: 63  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           E +  AT  ++   + D    +    +G   +A G   QA   F   L  DR  + A   
Sbjct: 27  ERYSQATGVFDSLIKSDGKHVNALYSRGVAHMATGNYRQAGQDFLRALAVDRGFLSAYKN 86

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
              V+   G+   +L   ++ L++ P    A  L +G     +G+  KAR+  ++AL+LD
Sbjct: 87  LGFVQLTMGKEELALTTLEKVLEIDPEYVDAYCL-LGDVYIDIGKYDKAREMIEKALELD 145

Query: 183 PENVEALVALAVMDLQANEAAGIRK 207
           P+  E    +A+  L   +  G+R+
Sbjct: 146 PDGAEPHCKMAMYCLSQGDFKGLRE 170



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P      Y LA +Y     Y +A   + + +K   K    +   Y  G   +  G++R A
Sbjct: 10  PCDVEKQYELALAYMDNERYSQATGVFDSLIKSDGK---HVNALYSRGVAHMATGNYRQA 66

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
             +F + L +        K LG + + +G+ E A   L K  +IDP    A+  LG++ I
Sbjct: 67  GQDFLRALAVDRGFLSAYKNLGFVQLTMGKEELALTTLEKVLEIDPEYVDAYCLLGDVYI 126

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFK 427
             D G     +  AR +++KA E  P   E    + +    +G+F+   + ++
Sbjct: 127 --DIG----KYDKAREMIEKALELDPDGAEPHCKMAMYCLSQGDFKGLREEYR 173



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 101 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 160
           QA+  F  ++++D  +V AL  +       G Y  + + + RAL V      A +  +G 
Sbjct: 31  QATGVFDSLIKSDGKHVNALYSRGVAHMATGNYRQAGQDFLRALAVDRGFLSAYK-NLGF 89

Query: 161 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-- 218
            +  +G+   A    ++ L++DPE V+A   L  + +   +     K  E +++A E+  
Sbjct: 90  VQLTMGKEELALTTLEKVLEIDPEYVDAYCLLGDVYIDIGK---YDKAREMIEKALELDP 146

Query: 219 ---YPYCAMALNYLANHFF 234
               P+C MA+  L+   F
Sbjct: 147 DGAEPHCKMAMYCLSQGDF 165


>gi|297624994|ref|YP_003706428.1| hypothetical protein [Truepera radiovictrix DSM 17093]
 gi|297166174|gb|ADI15885.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM
           17093]
          Length = 357

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 33/312 (10%)

Query: 71  YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEF 128
           +Y +    + + P   +GKGQ L+ +G  ++  +  + VLEA  +   A   L  A VE 
Sbjct: 47  FYQQVLEREANNPDALLGKGQALVCEGAFDEGIATLQRVLEAAPERTEAYLRLASAYVEQ 106

Query: 129 NRGRYSDSLEFYKRALQV-----HPSCPGAIRLGI-GLCRYKLGQLGKARQAFQRALQLD 182
           +R       E  + AL V          GA  L + G+  Y+ G+L  AR A QRA+ LD
Sbjct: 107 HRNAPQRHTEGLQEALAVLEEAESAGLGGAELLNLRGMILYRRGELEAARDALQRAVALD 166

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH--- 239
                    L +  L   E   +   +  ++RA  + P  A A N L + +   G+    
Sbjct: 167 STAAAYYENLGLTYLGLGE---LEPAVRTLRRAVTLNPDSASARNQLGSAYLLLGRCEDA 223

Query: 240 -FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
            F +EQ    A       P +  + +NL R+    G+   A  Y+   V         ++
Sbjct: 224 LFELEQAVSLA-------PEQLETNFNLGRALFDCGEVRAARPYFEKVVALDVTALPPVY 276

Query: 299 PYYGLGQVQLKLGDFRSALTNFEK-VLEIYPDNCETLKALGHIYVQLGQI--------EK 349
            Y  L ++ L+ G++ +A+T   K  L   P+  E    LG  Y   G+         EK
Sbjct: 277 TY--LARIDLEEGNYDAAVTQATKGALLPQPNAAEAYYWLGQAYEARGRTSEDGASDAEK 334

Query: 350 AQELLRKAAKID 361
           A+E   +A ++D
Sbjct: 335 AREAYERALQLD 346



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 26/280 (9%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYP- 220
           Y  G    AR  +Q+ L+ +  N +AL+       QA    G   +G+  +QR  E  P 
Sbjct: 36  YAQGNCLSARLFYQQVLEREANNPDALLGKG----QALVCEGAFDEGIATLQRVLEAAPE 91

Query: 221 ----YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL----ARSYHS 272
               Y  +A  Y+  H     +H   E L E ALAV     +       L        + 
Sbjct: 92  RTEAYLRLASAYVEQHRNAPQRH--TEGLQE-ALAVLEEAESAGLGGAELLNLRGMILYR 148

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           +G+ E A      +V   +    +   Y  LG   L LG+   A+    + + + PD+  
Sbjct: 149 RGELEAARDALQRAVALDSTAAAY---YENLGLTYLGLGELEPAVRTLRRAVTLNPDSAS 205

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTAR 391
               LG  Y+ LG+ E A   L +A  + P   +   +LG  L    +  AA   F+   
Sbjct: 206 ARNQLGSAYLLLGRCEDALFELEQAVSLAPEQLETNFNLGRALFDCGEVRAARPYFEKVV 265

Query: 392 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESA-HQSFKDAL 430
            L   A   +P  V   +  I  E+G +++A  Q+ K AL
Sbjct: 266 ALDVTA---LP-PVYTYLARIDLEEGNYDAAVTQATKGAL 301


>gi|159030801|emb|CAO88480.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 647

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 140/299 (46%), Gaps = 49/299 (16%)

Query: 171 ARQAFQRALQLDPE-NVEALVALAVMDLQA--NEAAGIRKGMEKMQRAFEIYPYCAMAL- 226
           A + +Q+A+ L  E N+E       +DL A  N  AGI   + + Q+A E   +C  +L 
Sbjct: 257 AIEYYQKAIDLQKELNLE-------LDLVASLNSLAGIYYCLGEYQKALE---FCQQSLA 306

Query: 227 ---------------NYLANHFFFTGQHFLVEQLTETALAVTNH-GPTK--SHSYYNLAR 268
                          N L N ++  G++    +  + +LA+T   G  K  ++SY NL  
Sbjct: 307 ITREIGDRGGEAKSYNNLGNVYYSLGEYQKALEFHQQSLAITREIGDRKGEANSYNNLGN 366

Query: 269 SYHSKGDYEKAGLYY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 325
            Y+S G+Y+KA  +Y   +A  +EI         Y  LG V   LG+++ A+   ++ L 
Sbjct: 367 VYYSLGEYQKAIEFYQQSLAITREIGNRGVEAKSYNNLGAVYYSLGEYQKAIEFHQQSLA 426

Query: 326 IYPD------NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR------DAQAFIDLGE 373
           I  +         +   LG++Y  LG+ +KA E  +++  I         +A +++ LG 
Sbjct: 427 ITREIGDRKGEANSYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGNRGGEANSYMGLGN 486

Query: 374 LLIS-SDTGAALDAFKTARTLLKKAGEEV-PIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           +  S  +   A++ ++ +  +L++ G+        NN+G +++  GE++ A +  + +L
Sbjct: 487 VYDSLGEYQKAIEFYQQSLAILREIGDRWGEAASYNNLGNVYYSLGEYQKAIEFHQQSL 545



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 153/349 (43%), Gaps = 62/349 (17%)

Query: 110 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-------IGLCR 162
           L  + D V +L   A + +  G Y  +LEF +++L +        R G       +G   
Sbjct: 271 LNLELDLVASLNSLAGIYYCLGEYQKALEFCQQSLAITREIGD--RGGEAKSYNNLGNVY 328

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
           Y LG+  KA +  Q++L +  E                   G RKG              
Sbjct: 329 YSLGEYQKALEFHQQSLAITRE------------------IGDRKGE------------- 357

Query: 223 AMALNYLANHFFFTGQHFLVEQLTETALAVT----NHGPTKSHSYYNLARSYHSKGDYEK 278
           A + N L N ++  G++    +  + +LA+T    N G  ++ SY NL   Y+S G+Y+K
Sbjct: 358 ANSYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGNRG-VEAKSYNNLGAVYYSLGEYQK 416

Query: 279 AGLYY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD------ 329
           A  ++   +A  +EI         Y  LG V   LG+++ A+  +++ L I  +      
Sbjct: 417 AIEFHQQSLAITREIGDRKGEANSYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGNRGG 476

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR------DAQAFIDLGELLIS-SDTGA 382
              +   LG++Y  LG+ +KA E  +++  I         +A ++ +LG +  S  +   
Sbjct: 477 EANSYMGLGNVYDSLGEYQKAIEFYQQSLAILREIGDRWGEAASYNNLGNVYYSLGEYQK 536

Query: 383 ALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A++  + +  + ++ G+ +      NN+G +++  GE++ A +  + +L
Sbjct: 537 AIEFHQQSLAITREIGDRKGEANSYNNLGNVYYSLGEYQKAIEFHQQSL 585



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 47/313 (15%)

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-------IGLCRYKLGQLGKARQAFQRA 178
           V ++ G Y  +LEF++++L +        R G       +G   Y LG+  KA + +Q++
Sbjct: 327 VYYSLGEYQKALEFHQQSLAITREIGD--RKGEANSYNNLGNVYYSLGEYQKAIEFYQQS 384

Query: 179 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC-------------AMA 225
           L +  E    +    V     N    +   + + Q+A E +                A +
Sbjct: 385 LAITRE----IGNRGVEAKSYNNLGAVYYSLGEYQKAIEFHQQSLAITREIGDRKGEANS 440

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVT----NHGPTKSHSYYNLARSYHSKGDYEKAGL 281
            N L N ++  G++    +  + +LA+T    N G  +++SY  L   Y S G+Y+KA  
Sbjct: 441 YNNLGNVYYSLGEYQKAIEFYQQSLAITREIGNRG-GEANSYMGLGNVYDSLGEYQKAIE 499

Query: 282 YY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD------NCE 332
           +Y   +A ++EI         Y  LG V   LG+++ A+   ++ L I  +         
Sbjct: 500 FYQQSLAILREIGDRWGEAASYNNLGNVYYSLGEYQKAIEFHQQSLAITREIGDRKGEAN 559

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPR------DAQAFIDLGELLISSD-TGAALD 385
           +   LG++Y  LG+ +KA E  +++  I         +A+++ +LG      D    A +
Sbjct: 560 SYNNLGNVYYSLGEYQKAIEFHQQSLAITREIGNRGVEAKSWFNLGFTYYKLDRISEAKE 619

Query: 386 AFKTARTLLKKAG 398
           A+  +R L +  G
Sbjct: 620 AYLQSRELYQALG 632


>gi|320352459|ref|YP_004193798.1| hypothetical protein Despr_0323 [Desulfobulbus propionicus DSM
           2032]
 gi|320120961|gb|ADW16507.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 758

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 164/692 (23%), Positives = 257/692 (37%), Gaps = 147/692 (21%)

Query: 17  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 76
           I+E  ++ +ID  YAD RY+       LG+ Y   G +     E             +A+
Sbjct: 52  IIELRNAIQIDPKYADARYQ-------LGLLYLKSGDVRQAFAE-----------LQRAA 93

Query: 77  RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 136
            +D       +   +  L   + E A      VL    DN  AL  QA +E   G++  +
Sbjct: 94  TLDPKNLDAKIKTAEFYLLTKKKEDAQKHIDEVLVQAPDNKDALALQANLELVDGKFDAA 153

Query: 137 LEFYKRALQVHPSCPG--AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 194
           +    +A+   P+     AI+ G  L   +  Q   A  AF +AL+LD + +     LA 
Sbjct: 154 IATVDKAIAGAPNEDRFYAIK-GRALSAKQ--QFPAAENAFLKALELDGKKLANHATLAA 210

Query: 195 MDLQANEAAGIRKGMEKMQRAF--EIYPYCAMA-LNYLANHFFFTGQHFLVEQLTETALA 251
             ++  E +  +  +EKM  AF     PY  MA +  + N+     QH     LT+ AL 
Sbjct: 211 FYVERKELSKAKASLEKMAAAFPDSSQPYLQMASIELMENNPDAAEQH-----LTQ-ALK 264

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE-------FIFPYYGLG 304
           V    P  S     +A  Y  KG +E+A   Y  ++++ +KP +       F F +    
Sbjct: 265 VD---PKNSKLKTAIADFYSKKGKFEQAEQLYKEAIQDTDKPEDAEAQLANFYFDHGKFD 321

Query: 305 QV------------------------QLKLGDFRSALTNFEKVLEIYPDNCET--LKALG 338
           Q                         QLK G  + AL     +L  YP   E   +KAL 
Sbjct: 322 QAKVELDKVVAKNAKNATAKLVQAKFQLKDGKNQEALDIVTGLLGDYPKWSELFFVKALA 381

Query: 339 HIYV--------------------------------QLGQIEKAQELLRKAAKIDPRDAQ 366
           H  +                                Q G+ E A++    A KI+PRD Q
Sbjct: 382 HSNLKDFKLAKEALLEAIKLSPGFSKAHSLLALLSLQEGEFETAKKEAATALKINPRDFQ 441

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 424
           A + L + ++ S        ++TA  +  +   +VP  +EVL ++G+ +    +   A Q
Sbjct: 442 AALTLAKGVLFSKE------YETAEKMFSELHAKVPDNVEVLGSLGLTYLAMKQEAKAKQ 495

Query: 425 SFKDALG------------------DGIWLTLLDSKTKTYVIDASASM-LQFKDMQLFHR 465
           +F+  L                    G     L   T+  +  A  S  LQ     LF  
Sbjct: 496 TFEKLLAVQPDNAKAFSFLLQLAQKSGAQKEALIKMTQAQIDKAPKSAGLQILLANLFLS 555

Query: 466 FENDGNHVEL--------PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 517
            +     +EL        P N      + A +L +   T  A   YR +L K  + + AY
Sbjct: 556 AQQPDKALELYSKAQELDPDNPQPYAMS-ALILTRQGKTDQAIAEYRDLLAKQPNAIGAY 614

Query: 518 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAAS 575
           + L +I +      L+ E   +AL V   +  A + L  +  E K+ D     E  R A 
Sbjct: 615 MGLGSIYEQTGKTDLAKEAYQKALAVKPDFAPAANNLAWMIAESKDPDL---GEALRLAM 671

Query: 576 DATDGK-DSYATLSLGNWNY-----FAALRNE 601
            A   K D Y  +    W +     F+  RNE
Sbjct: 672 TAKQQKPDDYHIIDTLGWVHYKRGSFSLARNE 703



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 22/254 (8%)

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P+NVE L +L +  L   + A  ++  EK+     + P  A A ++L      +G     
Sbjct: 471 PDNVEVLGSLGLTYLAMKQEAKAKQTFEKL---LAVQPDNAKAFSFLLQLAQKSGAQ--K 525

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYY 301
           E L +   A  +  P  +     LA  + S    +KA  LY  A   + + P     PY 
Sbjct: 526 EALIKMTQAQIDKAPKSAGLQILLANLFLSAQQPDKALELYSKAQELDPDNPQ----PYA 581

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
               +  + G    A+  +  +L   P+       LG IY Q G+ + A+E  +KA  + 
Sbjct: 582 MSALILTRQGKTDQAIAEYRDLLAKQPNAIGAYMGLGSIYEQTGKTDLAKEAYQKALAVK 641

Query: 362 PRDAQAFIDLGELLISS---DTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEK 416
           P  A A  +L  ++  S   D G AL    TA+       ++ P +  +++ +G +H+++
Sbjct: 642 PDFAPAANNLAWMIAESKDPDLGEALRLAMTAK-------QQKPDDYHIIDTLGWVHYKR 694

Query: 417 GEFESAHQSFKDAL 430
           G F  A   F  A+
Sbjct: 695 GSFSLARNEFVQAV 708


>gi|334119850|ref|ZP_08493934.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333457491|gb|EGK86114.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 545

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 170/431 (39%), Gaps = 105/431 (24%)

Query: 5   YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNA-LGVYYTYLGKIETKQREKEE 63
           YF +G + +    LEE ++           Y+R   LN     Y+  LG++  K  +++ 
Sbjct: 15  YFHRGNLLKQSHKLEEAAAA----------YQRCTELNPDFSWYHHNLGEVLAKLGQRDG 64

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
               A + Y +A  ++ +   +W   G++L  +G +++A  A++  +E            
Sbjct: 65  ----AEKSYRRACELNPNSAWSWHNLGEVLEQQGNLDEAVVAYRKAVEI----------- 109

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
                    Y D  EFY               LG GLC    GQL ++    QRA++LD 
Sbjct: 110 ---------YPDFYEFYNS-------------LGKGLCLQ--GQLDESISCLQRAIELDS 145

Query: 184 ENVEALVALAVMDLQANEA--AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
           E+     AL   +L    A    + +G+E ++ A E+                       
Sbjct: 146 ES-----ALPYQNLWEALARQGRVDEGIECLRHAIEL----------------------- 177

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
                          P +   Y  LA +   K +  +A  YY  ++    KP +F + YY
Sbjct: 178 --------------NPGEGDLYLKLAEALQGKNELAEAVGYYRKAMP--LKP-DFHWLYY 220

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            LG      G +  A+ ++ K  E+ P +      LGH    + + E+A    RKA  I 
Sbjct: 221 KLGTALSAQGQWEEAIASYSKAAELEPGSAIVHHYLGHTLSIVQRWEEAIASYRKALDIV 280

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEF 419
           P  A  +  LG+ L      A L  ++ A    +K+ E  P  +E  +++G   ++ G +
Sbjct: 281 PNAAVIYQHLGDAL------AKLQKWEQAVGAYRKSVEFEPNSLEAQDHLGFALYQLGRY 334

Query: 420 ESAHQSFKDAL 430
           + A  +++ AL
Sbjct: 335 DEAISAYRRAL 345



 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 74/342 (21%), Positives = 145/342 (42%), Gaps = 51/342 (14%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGK---GQLLLAKGEVEQASS 104
           Y  LG   + Q + EE    A   Y+KA+ +   EP + +     G  L      E+A +
Sbjct: 219 YYKLGTALSAQGQWEE----AIASYSKAAEL---EPGSAIVHHYLGHTLSIVQRWEEAIA 271

Query: 105 AFKIVLEADRDNVPAL------LGQACVEFNR-----GRYSDSLEFYKRALQVHPSCPGA 153
           +++  L    D VP        LG A  +  +     G Y  S+EF   +L+        
Sbjct: 272 SYRKAL----DIVPNAAVIYQHLGDALAKLQKWEQAVGAYRKSVEFEPNSLEAQDH---- 323

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 213
               +G   Y+LG+  +A  A++RAL++ P++        V+     EA   R  ++ +Q
Sbjct: 324 ----LGFALYQLGRYDEAISAYRRALEIAPDS-------DVVHCHLGEALQKRARVQPLQ 372

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
           +  E+    A+     A+    +          E A          S  Y  L ++   +
Sbjct: 373 KDVELDLDEAVKCYRRASKLNPSN--------LEAAQKAVEIKSEDSELYLQLGKALAEQ 424

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G ++ A   Y    + +++  +     + LG+   KLG +  A+ ++++ ++++ ++  +
Sbjct: 425 GQFDGAIAQYR---RVLDRNSDSWEAQHYLGEALAKLGRWDEAIASYDRCVKLHSEDFMS 481

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
              LG +++  G  E+A E  +KA  ++P  A+ +  LG+ L
Sbjct: 482 YAGLGDVWLGKGMPERAIEFYQKAIDLNPNLAEVYDKLGDTL 523



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 11/152 (7%)

Query: 230 ANHFFFTGQHFLVEQ---LTETALA---VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
           A+++F  G   L++Q   L E A A    T   P  S  ++NL       G  + A   Y
Sbjct: 12  ASNYFHRGN--LLKQSHKLEEAAAAYQRCTELNPDFSWYHHNLGEVLAKLGQRDGAEKSY 69

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +  E+N P+   + ++ LG+V  + G+   A+  + K +EIYPD  E   +LG     
Sbjct: 70  RRAC-ELN-PNS-AWSWHNLGEVLEQQGNLDEAVVAYRKAVEIYPDFYEFYNSLGKGLCL 126

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            GQ++++   L++A ++D   A  + +L E L
Sbjct: 127 QGQLDESISCLQRAIELDSESALPYQNLWEAL 158


>gi|86606719|ref|YP_475482.1| hypothetical protein CYA_2079 [Synechococcus sp. JA-3-3Ab]
 gi|86555261|gb|ABD00219.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab]
          Length = 774

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 137/299 (45%), Gaps = 16/299 (5%)

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           LA    NKA R +  +P TW+ +G +L        A+++F  VL+ +  +      Q   
Sbjct: 389 LALNSLNKALRYNPQQPRTWLARGIVLRRLRRPSSAAASFARVLKLNPRSGRVWRYQGNA 448

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
            F+  R   ++E YKR+L++    P  +  LG+ L R  LGQ   A +A +RAL+ D +N
Sbjct: 449 LFHCQRLRSAIECYKRSLRLRRRDPITLHNLGVALLR--LGQYRLASKALERALRYDADN 506

Query: 186 VEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            ++  A  V    A +  G +R+     + A +I P    A   LA      GQ+   E 
Sbjct: 507 PKSWYARGV----AFQKLGYLREACIHFEEALKIRPEDFPARYALAVAQQELGQY---EA 559

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF-IFPYYGL 303
             E    +    P     ++    S    G  E+A    +A+ +++ + +E   + ++ L
Sbjct: 560 SLEQFRRLVQQRPGSFACWFGQITSLRRLGRLEEA----LAAAQQMTRLNERDPWGWFAL 615

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           G V   L +   A+  + +VL++ P++   L       ++LG++E A    ++A +++P
Sbjct: 616 GLVYGDLKEAEKAVEAYSRVLQLTPEDAVALNNRAWEALKLGKLELALADAQRATELEP 674



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 24/258 (9%)

Query: 26  IDEYYADVRYER--IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEP 83
           I+ Y   +R  R     L+ LGV    LG+           + LA++   +A R D   P
Sbjct: 459 IECYKRSLRLRRRDPITLHNLGVALLRLGQ-----------YRLASKALERALRYDADNP 507

Query: 84  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 143
            +W  +G      G + +A   F+  L+   ++ PA    A  +   G+Y  SLE ++R 
Sbjct: 508 KSWYARGVAFQKLGYLREACIHFEEALKIRPEDFPARYALAVAQQELGQYEASLEQFRRL 567

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQANE 201
           +Q  P    A   G      +LG+L +A  A Q+  +L+  +     AL ++  DL+  E
Sbjct: 568 VQQRPGS-FACWFGQITSLRRLGRLEEALAAAQQMTRLNERDPWGWFALGLVYGDLKEAE 626

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
                K +E   R  ++ P  A+ALN  A      G+   +E     A   T   P +  
Sbjct: 627 -----KAVEAYSRVLQLTPEDAVALNNRAWEALKLGK---LELALADAQRATELEPQRPA 678

Query: 262 SYYNLARSYHSKGDYEKA 279
            ++ LA      G  E A
Sbjct: 679 FWHTLALIQLQAGQREAA 696



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 14/293 (4%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y++A  +D +    W  +G +L+      +A  ++   L  +  +    L  A +    G
Sbjct: 292 YDRALNMDPNFALAWSRRGDVLVQLARYREAVDSYNGSLSINPYDEETRLRLALILGRLG 351

Query: 132 RYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           +Y  ++  Y + L+ +P    A    GI L + K  +L  A  +  +AL+ +P+     +
Sbjct: 352 QYKAAVVNYDKVLESNPEDALAWHNRGIRLMQLKRPKL--ALNSLNKALRYNPQQPRTWL 409

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
           A  ++  +    +          R  ++ P       Y  N  F   +     +  + +L
Sbjct: 410 ARGIVLRRLRRPSS---AAASFARVLKLNPRSGRVWRYQGNALFHCQRLRSAIECYKRSL 466

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLK 309
            +    P   H   NL  +    G Y  A      +++ + + P      +Y  G    K
Sbjct: 467 RLRRRDPITLH---NLGVALLRLGQYRLASKALERALRYDADNPKS----WYARGVAFQK 519

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG  R A  +FE+ L+I P++     AL     +LGQ E + E  R+  +  P
Sbjct: 520 LGYLREACIHFEEALKIRPEDFPARYALAVAQQELGQYEASLEQFRRLVQQRP 572


>gi|410671866|ref|YP_006924237.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
 gi|409170994|gb|AFV24869.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
          Length = 368

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 81/385 (21%), Positives = 158/385 (41%), Gaps = 65/385 (16%)

Query: 6   FKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHF 65
           F  G +E+ +Q+L  G     + Y +++ YE IA ++ + V   Y   I+    + E  +
Sbjct: 17  FSAGCIEEEQQVLNTG-----ELYRSNMYYEAIASVDNIQVDDPYY--IDALNYKGESLY 69

Query: 66  IL-----ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
            L     A   YN+   +D      WV KG  LL   E ++A + +   +EAD +   A 
Sbjct: 70  ALSRYNEAIGCYNEVIEMDPENSKAWVNKGDSLLEIYEYDEADACYGRAIEADPEFDEAW 129

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVH----PSCPGAIRLGI--GLCRYKLGQLGKARQA 174
            G+    +  G Y++S EF++++++       S P +       G+    +G+  ++ + 
Sbjct: 130 SGKGITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGISFSYIGRTNESLEC 189

Query: 175 FQRALQLDPENVEA-------LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
           +++A++L+PE   A       L+ L   D          + ++    A EI P       
Sbjct: 190 YEKAIELNPEYANAWRGKGYELIELGRYD----------EAIQCYDNAIEINP------- 232

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
              + + + G+ +++ +      A+           ++ A   H +  Y      YM  +
Sbjct: 233 --EDAYAWVGKGYVLYKFDRYDEAIKC---------FDKAIEIHPEDAYAWGNKGYMLGI 281

Query: 288 KE------------INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
            E            I    EF   +   G    KLG +  A+  ++  +EI P+  +  +
Sbjct: 282 LERYDEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNAIEINPEYADAWE 341

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKI 360
             G    +LG+ ++A E  +KA K+
Sbjct: 342 GKGDALNELGRSDEANECYKKAEKL 366



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 56/277 (20%), Positives = 116/277 (41%), Gaps = 24/277 (8%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYP 220
           Y L +  +A   +   +++DPEN +A V    +++++   + A    G     RA E  P
Sbjct: 69  YALSRYNEAIGCYNEVIEMDPENSKAWVNKGDSLLEIYEYDEADACYG-----RAIEADP 123

Query: 221 -----YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
                +    +    N  +     F  + +  +   +T+  P    ++YN   S+   G 
Sbjct: 124 EFDEAWSGKGITLYLNGSYNESAEFFEKSIEYSDKKITSD-PDSFEAWYNKGISFSYIGR 182

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
             ++   Y  ++ E+N   E+   + G G   ++LG +  A+  ++  +EI P++     
Sbjct: 183 TNESLECYEKAI-ELNP--EYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWV 239

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
             G++  +  + ++A +   KA +I P DA A+ + G +L        L+ +  A     
Sbjct: 240 GKGYVLYKFDRYDEAIKCFDKAIEIHPEDAYAWGNKGYML------GILERYDEAIECYD 293

Query: 396 KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           K  E  P         G   ++ G ++ A Q + +A+
Sbjct: 294 KVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNAI 330


>gi|45357839|ref|NP_987396.1| hypothetical protein MMP0276 [Methanococcus maripaludis S2]
 gi|45047399|emb|CAF29832.1| Conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 344

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 73/319 (22%), Positives = 135/319 (42%), Gaps = 20/319 (6%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           +++ +   YN A   +      WV KG  LL  G   +++  F   L  D +N  A  G 
Sbjct: 40  NYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGL 99

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
             V    G Y  +LE Y ++L +      A +   G+    + +  +A   F +++ ++ 
Sbjct: 100 GTVLSKTGNYQKALEMYDKSLNIDSENSEAWK-NKGITLNNMQRYSEAIDCFDKSISINA 158

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
           +N +          +  E     K ++   +A  I      AL          G  +L  
Sbjct: 159 KNSDVWYNKGETQFKLGE---YEKSIDSYNKALLIDEKMETAL-------LGKGNSYLKL 208

Query: 244 QLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
           Q  E+A+   N      P   +  Y  A +Y    ++E A  YY  ++ EIN  +  I  
Sbjct: 209 QNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEYALKYYDEAL-EINPSNSDILI 267

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
             G+   ++K  ++ +A++NF+  +++ P N +     G+ YV L   E +    +KA +
Sbjct: 268 SKGICLDKMK--NYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISCYKKALE 325

Query: 360 IDPR--DAQAFIDLGELLI 376
           I+P+  +A+  ID+ E +I
Sbjct: 326 IEPKNENAKENIDIIEKII 344



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 16/207 (7%)

Query: 256 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 315
           G  KS SY +     +++G+Y  +   Y  ++ E  K  E    +   G   LKLG +  
Sbjct: 21  GDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEI---WVNKGNSLLKLGIYGE 77

Query: 316 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           +   F+K L I P+N E    LG +  + G  +KA E+  K+  ID  +++A+ + G  L
Sbjct: 78  STECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITL 137

Query: 376 ISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 434
            +      A+D F  + ++  K       +V  N G   F+ GE+E +  S+  AL    
Sbjct: 138 NNMQRYSEAIDCFDKSISINAKNS-----DVWYNKGETQFKLGEYEKSIDSYNKAL---- 188

Query: 435 WLTLLDSKTKTYVIDASASMLQFKDMQ 461
              L+D K +T ++    S L+ ++ +
Sbjct: 189 ---LIDEKMETALLGKGNSYLKLQNYE 212


>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
 gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
          Length = 345

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 135/308 (43%), Gaps = 32/308 (10%)

Query: 66  ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-ADRDNVPALLGQA 124
           I A +   K   +D + P ++   G + L +G  E+A    K  +E   +      LG A
Sbjct: 43  IKAKELLKKYINLDKNNPESYYYLGSIYLEEGNPEKAVKYLKKAVEKGKKAEYFNDLGYA 102

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
              F +G    +++ Y +A+++ P    A     GL   K+G   +A + + RA+ L+PE
Sbjct: 103 --YFLKGDPEKAIKCYTKAIEIKPDLAVAY-YNRGLAFKKMGDYDEAVKNYNRAIALNPE 159

Query: 185 NVEALVALAVM-----DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           + +    L ++     DLQ        K +   ++A EI P      N L N ++    +
Sbjct: 160 DPDYYYNLGIVYRIKGDLQ--------KAVNCYKKAIEINPENENYYNNLGNVYYDMKDY 211

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
               +  + A+ +    P     + NL  +Y   GDYEKA   +  ++K   +  E    
Sbjct: 212 KKAVECYKKAVEIN---PLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAEC--- 265

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL-----GHIYVQLGQIEKAQELL 354
           Y  +G    +LG +  AL  +EK  +I PD    LKAL       +Y   G  EKA +LL
Sbjct: 266 YMDMGIALKELGRYDEALKAYEKAEQINPD----LKALSLYNKACLYASKGDKEKALKLL 321

Query: 355 RKAAKIDP 362
           +++  IDP
Sbjct: 322 KESFSIDP 329



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHS--YYN-LARSYHSKGDYEKAGLYYMASVKE 289
           +++ G  +L E   E A+        K     Y+N L  +Y  KGD EKA   Y  ++ E
Sbjct: 63  YYYLGSIYLEEGNPEKAVKYLKKAVEKGKKAEYFNDLGYAYFLKGDPEKAIKCYTKAI-E 121

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
           I KP +    YY  G    K+GD+  A+ N+ + + + P++ +    LG +Y   G ++K
Sbjct: 122 I-KP-DLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPEDPDYYYNLGIVYRIKGDLQK 179

Query: 350 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN-- 407
           A    +KA +I+P +   + +LG +         +  +K A    KKA E  P+  L   
Sbjct: 180 AVNCYKKAIEINPENENYYNNLGNVYYD------MKDYKKAVECYKKAVEINPLFFLGWQ 233

Query: 408 NIGVIHFEKGEFESAHQSFKDAL 430
           N+G  + + G++E A ++FK AL
Sbjct: 234 NLGNTYLDMGDYEKAVKAFKKAL 256



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 34/270 (12%)

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQANEAAG----IRKGMEKMQRAFEIYPYCAMA 225
           KA++  ++ + LD  N E+   L  + L+          ++K +EK ++A          
Sbjct: 44  KAKELLKKYINLDKNNPESYYYLGSIYLEEGNPEKAVKYLKKAVEKGKKA--------EY 95

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
            N L   +F  G     E+  +         P  + +YYN   ++   GDY++A      
Sbjct: 96  FNDLGYAYFLKGDP---EKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEA------ 146

Query: 286 SVKEINK-----PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
            VK  N+     P +  + YY LG V    GD + A+  ++K +EI P+N      LG++
Sbjct: 147 -VKNYNRAIALNPEDPDY-YYNLGIVYRIKGDLQKAVNCYKKAIEINPENENYYNNLGNV 204

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
           Y  +   +KA E  +KA +I+P     + +LG   +   D   A+ AFK A  + K++  
Sbjct: 205 YYDMKDYKKAVECYKKAVEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSA- 263

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
               E   ++G+   E G ++ A ++++ A
Sbjct: 264 ----ECYMDMGIALKELGRYDEALKAYEKA 289


>gi|315637376|ref|ZP_07892591.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315478350|gb|EFU69068.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 503

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 80/396 (20%), Positives = 163/396 (41%), Gaps = 60/396 (15%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQ------------YYNKASRIDMHEPSTWVGKGQ 91
           L +    + KI    R  ++ F+LA +             Y +  +ID      +     
Sbjct: 151 LDIISNEISKINISNRTAKDWFLLALENHKNNNLLEAEKLYKEVIKIDDKYSKAYNNLAF 210

Query: 92  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
           LL  KGE+++A   ++  ++ D  N  A    A +   R    ++ + Y+ A+++     
Sbjct: 211 LLSEKGEIDEAEKLYREAIKIDDKNSKAYNNLAFLLSEREEIDEAEKLYREAIKIDDKNS 270

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 211
                 + L     G++ +A + ++ A+++D +  +A   LAV+                
Sbjct: 271 NTYN-NLALLLANKGEIDEAEKLYKEAIKIDDKYSKAYNNLAVL---------------- 313

Query: 212 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 271
                                    G+    E+L   A+ + +     S++Y NLA    
Sbjct: 314 ---------------------LSEKGEMDEAEKLFREAIKIDDKN---SNTYNNLALLLK 349

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
           +KG+ ++A   Y  ++K  +K       Y  L  +    G+   A   +++ ++I   N 
Sbjct: 350 NKGEIDEAEKLYREAIKIDDKNSN---TYNNLALLLANKGEIDEAEKLYKEAIKIDDKNS 406

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 391
           +    L  +  + G+I +A++L R+A KID +D+  + +L  LL   + G   +A K  R
Sbjct: 407 KAYNNLAFLLSEKGEIGEAEKLYREAIKIDDKDSDIYYNLALLL--KNKGDIDEAEKLYR 464

Query: 392 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
             +K   ++  ++V NN+ V+   KG+ + A + +K
Sbjct: 465 EAIK--IDDKDLDVYNNLAVLLANKGDIDEAEKLYK 498



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 132/275 (48%), Gaps = 17/275 (6%)

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           + L  +K   L +A + ++  +++D +  +A   LA +    +E   I +  +  + A +
Sbjct: 174 LALENHKNNNLLEAEKLYKEVIKIDDKYSKAYNNLAFL---LSEKGEIDEAEKLYREAIK 230

Query: 218 IYPYCAMALNYLANHFFFTGQHFL--VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
           I    + A N LA  F  + +  +   E+L   A+ + +     S++Y NLA    +KG+
Sbjct: 231 IDDKNSKAYNNLA--FLLSEREEIDEAEKLYREAIKIDDKN---SNTYNNLALLLANKGE 285

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
            ++A   Y  ++K  +K  +    Y  L  +  + G+   A   F + ++I   N  T  
Sbjct: 286 IDEAEKLYKEAIKIDDKYSK---AYNNLAVLLSEKGEMDEAEKLFREAIKIDDKNSNTYN 342

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
            L  +    G+I++A++L R+A KID +++  + +L  LL  ++ G   +A K  +  +K
Sbjct: 343 NLALLLKNKGEIDEAEKLYREAIKIDDKNSNTYNNLALLL--ANKGEIDEAEKLYKEAIK 400

Query: 396 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              ++   +  NN+  +  EKGE   A + +++A+
Sbjct: 401 --IDDKNSKAYNNLAFLLSEKGEIGEAEKLYREAI 433



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 157/341 (46%), Gaps = 41/341 (12%)

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
           +++V++I     +    L  +  + G+I++A++L R+A KID ++++A+ +L  LL  S+
Sbjct: 191 YKEVIKIDDKYSKAYNNLAFLLSEKGEIDEAEKLYREAIKIDDKNSKAYNNLAFLL--SE 248

Query: 380 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 439
                +A K  R  +K   ++      NN+ ++   KGE + A + +K+A+       + 
Sbjct: 249 REEIDEAEKLYREAIK--IDDKNSNTYNNLALLLANKGEIDEAEKLYKEAI------KID 300

Query: 440 DSKTKTYVIDASASMLQFK-DM----QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 494
           D  +K Y  +  A +L  K +M    +LF         +++         NLA LL+   
Sbjct: 301 DKYSKAY--NNLAVLLSEKGEMDEAEKLFRE------AIKIDDKNSNTYNNLALLLKNKG 352

Query: 495 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 554
           +   A  LYR  +       + Y  LA +   +  +  + +L  EA+K++ K   A + L
Sbjct: 353 EIDEAEKLYREAIKIDDKNSNTYNNLALLLANKGEIDEAEKLYKEAIKIDDKNSKAYNNL 412

Query: 555 GDLELKNDDWVKAKETFRAASDATDGKDS--YATLSLGNWNYFAALRNEKRAPKLEATHL 612
             L  +  +  +A++ +R A    D KDS  Y  L+L        L+N+          +
Sbjct: 413 AFLLSEKGEIGEAEKLYREAI-KIDDKDSDIYYNLAL-------LLKNK--------GDI 456

Query: 613 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 653
           ++A++LY   I     +L   N   V+LA KG  D ++ L+
Sbjct: 457 DEAEKLYREAIKIDDKDLDVYNNLAVLLANKGDIDEAEKLY 497



 Score = 39.7 bits (91), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 141/307 (45%), Gaps = 25/307 (8%)

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           S +Y NLA     KG+ ++A   Y  ++K  +K  +    Y  L  +  +  +   A   
Sbjct: 202 SKAYNNLAFLLSEKGEIDEAEKLYREAIKIDDKNSK---AYNNLAFLLSEREEIDEAEKL 258

Query: 320 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 379
           + + ++I   N  T   L  +    G+I++A++L ++A KID + ++A+ +L  LL  S+
Sbjct: 259 YREAIKIDDKNSNTYNNLALLLANKGEIDEAEKLYKEAIKIDDKYSKAYNNLAVLL--SE 316

Query: 380 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 439
            G   +A K  R  +K   ++      NN+ ++   KGE + A + +++A+       + 
Sbjct: 317 KGEMDEAEKLFREAIK--IDDKNSNTYNNLALLLKNKGEIDEAEKLYREAI------KID 368

Query: 440 DSKTKTYVIDASASMLQFK-DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA 498
           D  + TY  +  A +L  K ++    +   +   +++         NLA LL +  +   
Sbjct: 369 DKNSNTY--NNLALLLANKGEIDEAEKLYKEA--IKIDDKNSKAYNNLAFLLSEKGEIGE 424

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK----YPNALSML 554
           A  LYR  +       D Y  LA + K + ++  + +L  EA+K++ K    Y N   +L
Sbjct: 425 AEKLYREAIKIDDKDSDIYYNLALLLKNKGDIDEAEKLYREAIKIDDKDLDVYNNLAVLL 484

Query: 555 ---GDLE 558
              GD++
Sbjct: 485 ANKGDID 491


>gi|420255103|ref|ZP_14758056.1| tetratricopeptide repeat protein, partial [Burkholderia sp. BT03]
 gi|398046724|gb|EJL39314.1| tetratricopeptide repeat protein, partial [Burkholderia sp. BT03]
          Length = 576

 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 142/329 (43%), Gaps = 24/329 (7%)

Query: 97  GEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
           G ++ A   ++  LE D  +V AL  LG  C    +G++ ++ +  +RA  + P    A+
Sbjct: 27  GRLDDAERDYRATLELDPVHVDALHLLGVLC--HQQGQHEEAADLVRRAADLRPQD-AAL 83

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK-GMEKMQ 213
           +L +G     LG+L +A + F+ AL L P    A   L      A   AG  +  ++  Q
Sbjct: 84  QLNLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLG----NAYALAGRHEDAVDAFQ 139

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
           ++  + P  A +   L N     G+H         AL +    P  + ++ N+  + ++ 
Sbjct: 140 KSLRLQPLDASSHVNLGNALHALGRHREAVDSFRRALELR---PGHAGAHNNIGMALNAL 196

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G   +A  ++ A+ K   +   F+   + LG      G    A+  FE VL +  +    
Sbjct: 197 GSAREAIAHFRAAFKIEPR---FVAARFNLGNTLDATGQHHEAVAEFEAVLTLQTNLPPA 253

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 393
           L  LG+    LG+ E+A+    +A  +DP  A A++ LG          AL A+  A   
Sbjct: 254 LFGLGNALASLGRHEEARPRFERAVGLDPNFALAWLSLGA------AHHALGAYDAALRA 307

Query: 394 LKKAGEEVPIEVLN--NIGVIHFEKGEFE 420
             +A    P + +   N GV    +G+F+
Sbjct: 308 FDQALRLRPDQAIAHMNRGVTLLTRGDFK 336



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS- 377
           ++   LE+ P + + L  LG +  Q GQ E+A +L+R+AA + P+DA   ++LG  L + 
Sbjct: 35  DYRATLELDPVHVDALHLLGVLCHQQGQHEEAADLVRRAADLRPQDAALQLNLGNALKAL 94

Query: 378 SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
                A++ F+ A TL        P+    N+G  +   G  E A  +F+ +L
Sbjct: 95  GRLDQAIERFRNALTL----APTFPM-AHYNLGNAYALAGRHEDAVDAFQKSL 142



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 42  NALGVYYTYLGKIETKQREKEEHFILATQYYNK--ASRIDMHEPSTWVGKGQLLLAKGEV 99
           N +G+    LG      RE   HF  A +   +  A+R ++         G  L A G+ 
Sbjct: 187 NNIGMALNALGS----AREAIAHFRAAFKIEPRFVAARFNL---------GNTLDATGQH 233

Query: 100 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 159
            +A + F+ VL    +  PAL G      + GR+ ++   ++RA+ + P+   A  L +G
Sbjct: 234 HEAVAEFEAVLTLQTNLPPALFGLGNALASLGRHEEARPRFERAVGLDPNFALAW-LSLG 292

Query: 160 LCRYKLGQLGKARQAFQRALQLDPENVEA 188
              + LG    A +AF +AL+L P+   A
Sbjct: 293 AAHHALGAYDAALRAFDQALRLRPDQAIA 321


>gi|196013721|ref|XP_002116721.1| hypothetical protein TRIADDRAFT_60779 [Trichoplax adhaerens]
 gi|190580699|gb|EDV20780.1| hypothetical protein TRIADDRAFT_60779 [Trichoplax adhaerens]
          Length = 1397

 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 123/638 (19%), Positives = 271/638 (42%), Gaps = 103/638 (16%)

Query: 109  VLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
            +LE +  ++ A      V + +  +Y +++  ++++L++  S  G     +      +G+
Sbjct: 596  ILENNHPDIAASYNNIGVVYRKQTKYEEAISMFEKSLEIQSSALGYNHPEVAKSYSNMGK 655

Query: 168  LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
            +   +  ++ A+ +  ++++  + L+ +    +E A   K  + +    E+Y   + ++ 
Sbjct: 656  VYWKQSKYENAISMYEKSLK--IRLSTLGSNHSEVA---KSYDDLG---EVYRKQSKSME 707

Query: 228  YLANHFFFTGQHFLVEQLTETALAVTNHG-PTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
             L+          + E+  +  L+V  H  P  + SY N+  +Y  +G +E+A   Y  S
Sbjct: 708  ALS----------MYEKSLKIRLSVFGHNHPASAQSYNNIGLAYCDQGKHEEAISMYEKS 757

Query: 287  VK----EINKPHEFIFPYYG-LGQVQLKLGDFRSALTNFEKVLEI--------YPDNCET 333
            +K     +N  H  I   YG LG        +  A++ ++K LE+        +PD  +T
Sbjct: 758  LKIQLSVLNHNHPDIAMAYGNLGIAYSLQAKYEEAISMYKKSLELQLLAFGTNHPDVAKT 817

Query: 334  LKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGA-AL 384
               +G +Y   G+ E+A  +  K+ KI         P   + + ++G +    D    A+
Sbjct: 818  YNNMGTVYSDQGKYEEAISMYNKSLKIKLSIFDHNHPEVDKLYNNMGIVYFHQDKHVEAI 877

Query: 385  DAF-KTARTLLKKAGE--EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 441
              F K  + +L   G   E      NN+G ++  +G++E A   ++ +L   I +++LD 
Sbjct: 878  RIFEKCLKIVLLIFGHNHERVAATYNNMGNVYKNQGKYEEAISMYEKSLK--IQMSVLDH 935

Query: 442  K----TKTYVIDASASMLQFKDMQLFHRFEND---------GNHVELP--WNKVTVLFNL 486
                   +Y    +A   Q K  +    +E            NH ++   ++ + ++++ 
Sbjct: 936  NHPDVAASYNNMGNAYKNQGKHEEAIAMYEKSLKIRSLVLSHNHPDIAALYDNIGIVYSC 995

Query: 487  ARLLEQIHDTVAASVLYRLILF--KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 544
                E+ +  +  S+  RL ++  K+ D   +Y  +  + + ++  + +I +  ++LK+ 
Sbjct: 996  QGKYEKANSALEKSLKIRLSVYDSKHPDIAASYNNMGEVYRQQSKHKEAISMFEKSLKIR 1055

Query: 545  GKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRA 604
                  LS+LGD                   +  D   SY  +    WN         + 
Sbjct: 1056 ------LSVLGD-------------------NHCDTAASYNNIGEVYWN---------QG 1081

Query: 605  PKLEATHL-EKAKELYTRVI-VQHTSNLYAANGAGVVLAEKGQFDVSKDLF---TQVQEA 659
               EA ++ EK+ E+   V+   H+    + N  G+V  ++G ++ +  ++    +++ +
Sbjct: 1082 NHEEAIYMHEKSLEIRLSVLGCNHSDVAQSYNNIGLVYYDQGNYEEALPMYQKSLKIRLS 1141

Query: 660  ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 697
              G     +   + N+  VY+AQGN   A+ MY+  L+
Sbjct: 1142 VLGHEHSAVAQSYNNIGAVYYAQGNHEEALSMYEKSLK 1179


>gi|304311485|ref|YP_003811083.1| hypothetical protein HDN1F_18550 [gamma proteobacterium HdN1]
 gi|301797218|emb|CBL45438.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 600

 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 135/305 (44%), Gaps = 39/305 (12%)

Query: 151 PGAIRLGIGLCRYKLGQ--LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR-- 206
           P + RLG+   R  L Q  +  A++ F R +   PE+ +  ++LA++  + N+A G+   
Sbjct: 275 PDSKRLGLSYARLLLRQKRIDDAQKEFSRLVAQFPEDTDLALSLALVAWE-NDAEGVAET 333

Query: 207 --KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
             K +   +R+ E + Y    L  +A       QH   E + + +L   N GP  + +  
Sbjct: 334 QLKKLVDTERSNEAHTY----LGRIA-----AAQHRNSEAVEQFSL--VNEGPLFTAARM 382

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
            +A    S    ++A    +A  ++   P + +  Y    ++    G    AL   E+  
Sbjct: 383 QMAALLASDKQVDEA-CQTLARARQ-RAPQDSLQLYMMESEILSAAGRKSDALNVLEQTA 440

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL 384
           E YP+N   L A G +Y  + Q E  ++ +RK   +DP +A A   LG  L  +D    L
Sbjct: 441 EQYPENLSVLYAKGMMYGDMDQWEPMEQTMRKILALDPNNADAMNALGYTL--ADRNIRL 498

Query: 385 DAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGE-------FESAHQSFKDA-----L 430
           D    A  L+ KA    P    VL+++G + F +G+         +A++ F D      L
Sbjct: 499 D---EAYQLISKALSLTPNNPAVLDSMGWVKFRRGDLTGAVELLRAAYKDFPDPEVAAHL 555

Query: 431 GDGIW 435
           G+ +W
Sbjct: 556 GEALW 560


>gi|348516824|ref|XP_003445937.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Oreochromis niloticus]
          Length = 1038

 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G    A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 313 CPTHADS-----LNNLANIKREQGYIEEAVQLYRKAL----------------------- 344

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 345 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 384

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 385 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 444

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 445 ALKLKPDFPDAYCNLA 460


>gi|118383764|ref|XP_001025036.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89306803|gb|EAS04791.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 670

 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 155/348 (44%), Gaps = 26/348 (7%)

Query: 90  GQLLLAKGEV--EQASSAFKIVLE-----ADRDNVPALLGQACVEFNRGRYSDSLEFYKR 142
            Q L+A+ +   ++   +F+I+ E        D   A +G+ C  +   +Y  S  F  +
Sbjct: 302 SQFLIAQSKFVEKEFQKSFEIIQELVYKNPYNDEYLAWMGRIC--YALEKYEISEYFCYQ 359

Query: 143 ALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 201
            L+++     A   LGI    Y+  +L K    +Q+A+Q++P N+ AL  L +    +N+
Sbjct: 360 TLKLNKENDLAYFILGINNTHYEFLELAKVY--YQKAIQINPNNILALNNLGLAFQHSNQ 417

Query: 202 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
                  ++  Q A +I P     LN     F+  GQ+   E+   +           + 
Sbjct: 418 ---FEFSLQTYQNALKISPNDIDILNNQGTLFYKLGQY---EKAIASFKKALRINSEHNS 471

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           SY+NL   Y     Y K+  Y+ + VK     +E +F    LG    ++ + + +L  F 
Sbjct: 472 SYFNLGMLYLKMQKYNKSIKYFESLVKMTPLDNEALF---HLGFSYKQVQNHQKSLKYFY 528

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
           + L+I P   + L  +G +Y++    +K+   L+++ ++ P   +  I+LG   +  +  
Sbjct: 529 QALKIAPQKAKYLFNIGQVYMEKLLKQKSYTYLQRSLQLKPLSEKYVINLGVFYLQFEPE 588

Query: 382 AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
            AL  F ++    ++  +     + N +G+ +  + + ESA + +K A
Sbjct: 589 RALQHFISSFQRFQQNEK-----ICNYLGICYSNQNQLESAFECYKKA 631



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 51/309 (16%)

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLA---KGEVEQASSAFKIVLEADRDNVPALLGQ 123
           LA  YY KA +I+   P+  +    L LA     + E +   ++  L+   +++  L  Q
Sbjct: 386 LAKVYYQKAIQIN---PNNILALNNLGLAFQHSNQFEFSLQTYQNALKISPNDIDILNNQ 442

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
             + +  G+Y  ++  +K+AL+++ S   +    +G+   K+ +  K+ + F+  +++ P
Sbjct: 443 GTLFYKLGQYEKAIASFKKALRIN-SEHNSSYFNLGMLYLKMQKYNKSIKYFESLVKMTP 501

Query: 184 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
            + EAL  L        +    +K ++   +A +I P         A + F  GQ ++ +
Sbjct: 502 LDNEALFHLG---FSYKQVQNHQKSLKYFYQALKIAP-------QKAKYLFNIGQVYMEK 551

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            L +           KS++Y  L RS   K   EK  +                     L
Sbjct: 552 LLKQ-----------KSYTY--LQRSLQLKPLSEKYVI--------------------NL 578

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G   L+    R AL +F    + +  N +    LG  Y    Q+E A E  +KA  +D +
Sbjct: 579 GVFYLQFEPER-ALQHFISSFQRFQQNEKICNYLGICYSNQNQLESAFECYKKAYSLDQK 637

Query: 364 DAQAFIDLG 372
           ++ A +++ 
Sbjct: 638 NSFAVMNMN 646


>gi|399023126|ref|ZP_10725193.1| cytochrome c biogenesis factor [Chryseobacterium sp. CF314]
 gi|398083685|gb|EJL74390.1| cytochrome c biogenesis factor [Chryseobacterium sp. CF314]
          Length = 237

 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 18/188 (9%)

Query: 237 GQHFLVEQLTETAL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
           G +FL+E     A     +     P  +++YY LA +Y   GD  KA  Y+  S+ E+N 
Sbjct: 30  GNNFLLESDFRNAQKEFESSIQKDPNNANAYYGLALTYSVAGDNSKAIDYFTKSI-ELN- 87

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
             +F   Y   G + L  GDFR A  +F KV+ + PD       LG I +Q    ++A  
Sbjct: 88  -SDFTLAYAERGTLYLNSGDFRQAKKDFNKVVTLAPDLVVPYLYLGQIEIQNSNYQEAIS 146

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 412
              +  K DP++A A++  G   IS  T      +K A + + K+ E  P    N I  +
Sbjct: 147 NFEEVLKRDPKNATAYLSKG---ISEGTQG---DYKNAISSITKSIELNP---KNAIAYV 197

Query: 413 HFEKGEFE 420
           +  KG FE
Sbjct: 198 Y--KGTFE 203


>gi|376295888|ref|YP_005167118.1| hypothetical protein DND132_1101 [Desulfovibrio desulfuricans
           ND132]
 gi|323458449|gb|EGB14314.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           desulfuricans ND132]
          Length = 208

 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 7/173 (4%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           PT  +++YNL  +Y S+ D+ +A   ++ +V    +  E    Y  LG + L+ GD  S 
Sbjct: 22  PTCGNTHYNLGVAYLSRRDFLEAEREFLDAVAHSPRMAE---AYVQLGGIALQRGDMESC 78

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
           L+   +  +  P        +G +Y+Q G  +KA + L+KA K+DP  AQA   +  +LI
Sbjct: 79  LSYNVQATQQRPFFAVPWGNIGFVYMQQGDNDKAHKSLKKALKLDPDFAQAQATMSSVLI 138

Query: 377 SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           + +     D  K  +TLL+K     P    NN  +I  E+G +  A    + A
Sbjct: 139 AMNDFEEAD--KLLKTLLEKHAHFGP--GWNNKAIIEAERGNWGEAAVCIRKA 187


>gi|348516828|ref|XP_003445939.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           4 [Oreochromis niloticus]
          Length = 1054

 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G    A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASV 360

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 313 CPTHADS-----LNNLANIKREQGYIEEAVQLYRKAL----------------------- 344

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 345 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 384

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 385 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 444

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 445 ALKLKPDFPDAYCNLA 460


>gi|348516826|ref|XP_003445938.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           3 [Oreochromis niloticus]
          Length = 1064

 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G    A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 195/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 323 CPTHADS-----LNNLANIKREQGYIEEAVQLYRKAL----------------------- 354

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F    +             NLA +L+Q      A + Y+  +     +
Sbjct: 355 -------EVFPEFAAAHS-------------NLASVLQQQGKLQEALMHYKEAIRISPTF 394

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 395 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 454

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 455 ALKLKPDFPDAYCNLA 470


>gi|20089086|ref|NP_615161.1| hypothetical protein MA0188 [Methanosarcina acetivorans C2A]
 gi|19913948|gb|AAM03641.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 914

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 156/372 (41%), Gaps = 60/372 (16%)

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKL 165
           +D V  L     + +  G Y  +L+F +RAL +        HP    ++    GL    +
Sbjct: 514 KDIVTTLNILDVLYYKMGEYKKALQFSERALAIGETILGVQHPDVATSLDNLAGLYE-SM 572

Query: 166 GQLGKARQAFQRALQ-----LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-- 218
           G   +A Q  +RAL+     L P++ +  + L  +           K +   QR  EI  
Sbjct: 573 GNYKQALQLSERALEIYEKVLGPQHRDVAITLDNLAGLYESMGEYEKALIFYQRTIEIKE 632

Query: 219 ------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN-----HGPTKSHSYYNLA 267
                 +   A +L+ LA  +   G++    QL++ AL +         P  + +  N+A
Sbjct: 633 KVLGPQHSNFATSLDNLAVLYRQMGEYEKALQLSQRALEIYEKVLGPQHPDIATTLNNIA 692

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIF-PYY--------GLGQVQLKLGDFRSALT 318
             Y S GDY+K    Y  ++ EIN   E +F P Y         L     ++GD+  AL+
Sbjct: 693 LLYDSMGDYQKTLPLYQRAL-EIN---EKVFGPQYLGIATTLNNLAGFYRRVGDYEKALS 748

Query: 319 NFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DP 362
             ++ LEI        +PD   TL +L  IY  +G  EKA    +++  I         P
Sbjct: 749 LSQRSLEIDEKVLGSQHPDVARTLNSLALIYENIGDYEKALAFYQRSLDIREKVLGPQHP 808

Query: 363 RDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKA-GEEVP--IEVLNNIGVIHFEKGE 418
              +   +L  L  I  D   AL  ++    + +KA G + P    +LNN+  +H+  GE
Sbjct: 809 DVGRTLNNLARLYEIMGDHEKALTLYQRTIEIKEKALGPQHPDVATILNNLAGLHYRIGE 868

Query: 419 FESAHQSFKDAL 430
           ++ A   ++ AL
Sbjct: 869 YKKALPLYQRAL 880



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI--------YPYCAMALNYLANHFF 234
           PE+ + +  L ++D+   +    +K ++  +RA  I        +P  A +L+ LA  + 
Sbjct: 511 PEHKDIVTTLNILDVLYYKMGEYKKALQFSERALAIGETILGVQHPDVATSLDNLAGLYE 570

Query: 235 FTGQHFLVEQLTETALAVTNH--GPTK---SHSYYNLARSYHSKGDYEKAGLYYMASV-- 287
             G +    QL+E AL +     GP     + +  NLA  Y S G+YEKA ++Y  ++  
Sbjct: 571 SMGNYKQALQLSERALEIYEKVLGPQHRDVAITLDNLAGLYESMGEYEKALIFYQRTIEI 630

Query: 288 --KEINKPHE-FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY--------PDNCETLKA 336
             K +   H  F      L  +  ++G++  AL   ++ LEIY        PD   TL  
Sbjct: 631 KEKVLGPQHSNFATSLDNLAVLYRQMGEYEKALQLSQRALEIYEKVLGPQHPDIATTLNN 690

Query: 337 LGHIYVQLGQIEKAQELLRKAAKID 361
           +  +Y  +G  +K   L ++A +I+
Sbjct: 691 IALLYDSMGDYQKTLPLYQRALEIN 715


>gi|158521101|ref|YP_001528971.1| hypothetical protein Dole_1087 [Desulfococcus oleovorans Hxd3]
 gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 808

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 13/211 (6%)

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +G    K GQ  +A  AFQRA+ LDP   +A   L  +   A  A   +   EK      
Sbjct: 80  LGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEAKTFFEK---TLN 136

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           + P+   A N L N     G +       E  L +    P ++ ++YN+   +  + + E
Sbjct: 137 LAPHHLAARNNLGNLLQQAGDNDGALACFEAVLKIN---PRQAEAHYNIGNIHKLREEVE 193

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQL--KLGDFRSALTNFEKVLEIYPDNCETLK 335
            A  YY  ++   N    F+ PY GL ++ L  +  D   +L    K L + P N E L 
Sbjct: 194 PAARYYEQAIA-CNP--GFVPPYIGLARIHLANRRNDLAESL--IRKALRMDPKNGEALS 248

Query: 336 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
            L ++Y++ G+IE+A  +   A ++ P  A+
Sbjct: 249 ELANLYLREGRIEEAVPVFLAAIRVSPEKAE 279



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 121/282 (42%), Gaps = 28/282 (9%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           GQ+LL KG+ ++A++AF+  +  D     A      +    GR  ++  F+++ L + P 
Sbjct: 81  GQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEAKTFFEKTLNLAPH 140

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
              A R  +G    + G    A   F+  L+++P   EA   +  +         +R+ +
Sbjct: 141 HLAA-RNNLGNLLQQAGDNDGALACFEAVLKINPRQAEAHYNIGNIH-------KLREEV 192

Query: 210 EKMQRAFE---------IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
           E   R +E         + PY  +A  +LAN      ++ L E L   AL +    P   
Sbjct: 193 EPAARYYEQAIACNPGFVPPYIGLARIHLANR-----RNDLAESLIRKALRMD---PKNG 244

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
            +   LA  Y  +G  E+A   ++A+++   +  E    +  L       G    A+ +F
Sbjct: 245 EALSELANLYLREGRIEEAVPVFLAAIRVSPEKAEL---HGALATAYSIRGATSQAMASF 301

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           EK LE+ PD+  T  + G++    G  E A E  R+   +DP
Sbjct: 302 EKALELDPDSARTRFSYGNLLESSGNREGALEAYRRVMALDP 343



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 127/318 (39%), Gaps = 54/318 (16%)

Query: 259 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
           KS + +N A + H  G  E A   Y   ++E N  H      + LG +     D  +A  
Sbjct: 5   KSLTLFNKAVALHRAGSLEGAETLYRDLLRE-NPNHADAL--HLLGTIMAAKKDLVAAEG 61

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS 378
              K +E  P       +LG + ++ GQ ++A    ++A  +DP  AQA  +LG+  IS 
Sbjct: 62  TLRKAVEKAPKQAAFHNSLGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGK--ISK 119

Query: 379 DTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 436
             G A      A+T  +K     P  +   NN+G +  + G+ + A   F+         
Sbjct: 120 AAGRA----DEAKTFFEKTLNLAPHHLAARNNLGNLLQQAGDNDGALACFE--------- 166

Query: 437 TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 496
                           ++L+    Q            E  +N    + N+ +L E++   
Sbjct: 167 ----------------AVLKINPRQ-----------AEAHYN----IGNIHKLREEVEP- 194

Query: 497 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 556
             A+  Y   +     +V  Y+ LA I  A     L+  L+ +AL+++ K   ALS L +
Sbjct: 195 --AARYYEQAIACNPGFVPPYIGLARIHLANRRNDLAESLIRKALRMDPKNGEALSELAN 252

Query: 557 LELKNDDWVKAKETFRAA 574
           L L+     +A   F AA
Sbjct: 253 LYLREGRIEEAVPVFLAA 270



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 39/281 (13%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVM-----DLQANEAAGIRKGMEKM--QRA 215
           ++ G L  A   ++  L+ +P + +AL  L  +     DL A E   +RK +EK   Q A
Sbjct: 17  HRAGSLEGAETLYRDLLRENPNHADALHLLGTIMAAKKDLVAAEGT-LRKAVEKAPKQAA 75

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYH 271
           F          N L       GQ  L +  T+ A A         P  + +++NL +   
Sbjct: 76  FH---------NSL-------GQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISK 119

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
           + G  ++A  ++    K +N     +     LG +  + GD   AL  FE VL+I P   
Sbjct: 120 AAGRADEAKTFFE---KTLNLAPHHLAARNNLGNLLQQAGDNDGALACFEAVLKINPRQA 176

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 391
           E    +G+I+    ++E A     +A   +P     +I L  + +++           A 
Sbjct: 177 EAHYNIGNIHKLREEVEPAARYYEQAIACNPGFVPPYIGLARIHLANRRN------DLAE 230

Query: 392 TLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 430
           +L++KA    P   E L+ +  ++  +G  E A   F  A+
Sbjct: 231 SLIRKALRMDPKNGEALSELANLYLREGRIEEAVPVFLAAI 271


>gi|414075408|ref|YP_006994726.1| TPR repeat domain-containing protein [Anabaena sp. 90]
 gi|413968824|gb|AFW92913.1| TPR repeat domain-containing protein [Anabaena sp. 90]
          Length = 755

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 180/424 (42%), Gaps = 60/424 (14%)

Query: 45  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 104
           G  Y  LG    +Q +  E    A   + KA +++ ++   +VG G +L A+G+ ++A +
Sbjct: 64  GKAYNNLGNALRRQGKLPE----ALTAHQKALQLNPNDAEAYVGIGNVLNAQGKPDEAVA 119

Query: 105 AFKIVLEADRDNVPAL--LGQACVEFNR-----GRYSDSLEF------------------ 139
           A++  +E D     A   LG A  +  +       Y  ++EF                  
Sbjct: 120 AYRKAIEFDPKYAKAYNSLGNALYDQEKLKEAVAAYRKAIEFDHKYAAAYYNLGNVLYEQ 179

Query: 140 ---------YKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
                    Y++A++++P    A   LG  L   K  +L +A  A+Q A++L+P++  A 
Sbjct: 180 KELDEAVAAYRKAIELNPKYATAYNNLGNALSDQK--KLDEAVAAYQEAIKLNPKDATAY 237

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
             L +     ++   + + +   Q+A E+ P  A A   L N    + Q  L E +    
Sbjct: 238 NNLGIA---LSDQKKLDEAVAAYQKAIELDPKYATAYYNLGNA--LSDQKKLDEAVAAYQ 292

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
            A+    P  + +YYNL  +   +   ++A   Y    K I    ++   YY LG     
Sbjct: 293 KAIE-LDPKYATAYYNLGNALSDQKKLDEAVAAYQ---KAIELDPKYATAYYNLGNALRG 348

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
                 A+  ++K +E+ P        LG       ++++A    +KA +++P+DA A+ 
Sbjct: 349 QKKLDEAVAAYQKAIELNPKYATAYNNLGIALSDQKKLDEAVAAYQKAIELNPKDATAYY 408

Query: 370 DLGELLISSDTGA---ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
           +LG  L  SD      A+ A++ A  L  K        V NN+G    ++ + + A  ++
Sbjct: 409 NLGIAL--SDQKKLDEAVAAYQKAIELDPKDA-----AVYNNLGNALSDQKKLKEAISNY 461

Query: 427 KDAL 430
           K AL
Sbjct: 462 KTAL 465



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 46/260 (17%)

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
           ++ V  L  Q     + G  S +   +++ LQV P+  G     +G    + G+L +A  
Sbjct: 27  QNTVQQLFKQGETAESVGDNSQAETIWRKVLQVEPNN-GKAYNNLGNALRRQGKLPEALT 85

Query: 174 AFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 232
           A Q+ALQL+P + EA V +  V++ Q        + +   ++A E  P  A A N L N 
Sbjct: 86  AHQKALQLNPNDAEAYVGIGNVLNAQGKP----DEAVAAYRKAIEFDPKYAKAYNSLGNA 141

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
            +        E+L E   A                        Y KA          I  
Sbjct: 142 LYDQ------EKLKEAVAA------------------------YRKA----------IEF 161

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
            H++   YY LG V  +  +   A+  + K +E+ P        LG+      ++++A  
Sbjct: 162 DHKYAAAYYNLGNVLYEQKELDEAVAAYRKAIELNPKYATAYNNLGNALSDQKKLDEAVA 221

Query: 353 LLRKAAKIDPRDAQAFIDLG 372
             ++A K++P+DA A+ +LG
Sbjct: 222 AYQEAIKLNPKDATAYNNLG 241



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 22/212 (10%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y  LG   + Q++ +E    A   Y KA  +D    + +   G  L  + ++++A +A++
Sbjct: 271 YYNLGNALSDQKKLDE----AVAAYQKAIELDPKYATAYYNLGNALSDQKKLDEAVAAYQ 326

Query: 108 IVLEADRDNVPAL--LGQACVEFNRG--RYSDSLEFYKRALQVHPSCPGAIR-LGIGLCR 162
             +E D     A   LG A     RG  +  +++  Y++A++++P    A   LGI L  
Sbjct: 327 KAIELDPKYATAYYNLGNAL----RGQKKLDEAVAAYQKAIELNPKYATAYNNLGIALSD 382

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 222
            K  +L +A  A+Q+A++L+P++  A   L +     ++   + + +   Q+A E+ P  
Sbjct: 383 QK--KLDEAVAAYQKAIELNPKDATAYYNLGIA---LSDQKKLDEAVAAYQKAIELDPKD 437

Query: 223 AMALNYLANHFFFTGQHFLVEQLT--ETALAV 252
           A   N L N    + Q  L E ++  +TAL++
Sbjct: 438 AAVYNNLGNA--LSDQKKLKEAISNYKTALSL 467



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 43/72 (59%)

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G+    +GD   A T + KVL++ P+N +    LG+   + G++ +A    +KA +++P 
Sbjct: 37  GETAESVGDNSQAETIWRKVLQVEPNNGKAYNNLGNALRRQGKLPEALTAHQKALQLNPN 96

Query: 364 DAQAFIDLGELL 375
           DA+A++ +G +L
Sbjct: 97  DAEAYVGIGNVL 108


>gi|221488412|gb|EEE26626.1| signal transduction protein, putative [Toxoplasma gondii GT1]
          Length = 978

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 135/342 (39%), Gaps = 68/342 (19%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRA 143
           W  KG  L A G +++A    +  L  D  N  AL  +G A  E  RG    ++E Y+ +
Sbjct: 175 WNCKGVTLRALGRLQEALDCCREALRLDPGNTNALNNIGVALKE--RGELLQAVEHYRAS 232

Query: 144 LQVHPSCPGA-IRLGIGL--------------------------------CRYKLGQLG- 169
           L  +P  P     L + L                                C Y LG +  
Sbjct: 233 LVANPHQPTCRTNLAVALTDLGTKLKQEKKLQAALVCYTEALTADPTYAPCYYNLGVIHA 292

Query: 170 ------KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--- 220
                  A Q ++ A +L+P  VEA           N    + K + K++ A   Y    
Sbjct: 293 ETDDPHTALQMYREATRLNPSYVEAY----------NNMGAVCKNLGKLEDAISFYEKAL 342

Query: 221 YC----AMALNYLANHFFFTGQHFLVEQLTETALAVTN----HGPTKSHSYYNLARSYHS 272
            C     M+L+ +A      G      +  + A+++      + P  S +YYNL  +Y  
Sbjct: 343 ACNANYQMSLSNMAVALTDLGTQQKASEGAKKAISLYKKALIYNPYYSDAYYNLGVAYAD 402

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
              ++KA + Y  +V    +  E    Y  +G +     +   A   + K LEI PD  +
Sbjct: 403 LHKFDKALVNYQLAVAFNPRCAEA---YNNMGVIHKDRENTDQATVYYNKALEINPDFSQ 459

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           TL  LG +Y   G+I +A    ++A +++P  A+A+ +LG L
Sbjct: 460 TLNNLGVLYTCTGKIGEALHFAKRAIEVNPNYAEAYNNLGVL 501



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 100/267 (37%), Gaps = 24/267 (8%)

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETL--KALG-HIYVQLGQIEKAQELLRKAAKID-- 361
           Q    D R A  N   V ++    C +L  K+   H     G    A E+L+KAA  +  
Sbjct: 96  QRNCCDGRPAACNHRAVSDV----CASLPEKSFARHFLTSSGTFPSAAEILKKAAFFNSG 151

Query: 362 --PRDAQAFIDLGELLISSDT------GAALDAFKTARTLLKKAGEEVPIE-----VLNN 408
             P DA    + G  + + D       G  L A    +  L    E + ++      LNN
Sbjct: 152 NRPHDALLLCNAGLEVYAEDADLWNCKGVTLRALGRLQEALDCCREALRLDPGNTNALNN 211

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
           IGV   E+GE   A + ++ +L          +     + D    + Q K +Q       
Sbjct: 212 IGVALKERGELLQAVEHYRASLVANPHQPTCRTNLAVALTDLGTKLKQEKKLQAALVCYT 271

Query: 469 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
           +    +  +      +NL  +  +  D   A  +YR        YV+AY  + A+ K   
Sbjct: 272 EALTADPTY--APCYYNLGVIHAETDDPHTALQMYREATRLNPSYVEAYNNMGAVCKNLG 329

Query: 529 NLQLSIELVNEALKVNGKYPNALSMLG 555
            L+ +I    +AL  N  Y  +LS + 
Sbjct: 330 KLEDAISFYEKALACNANYQMSLSNMA 356


>gi|5052534|gb|AAD38597.1|AF145622_1 BcDNA.GH04245 [Drosophila melanogaster]
          Length = 1011

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 166/388 (42%), Gaps = 28/388 (7%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 121 YSNLGNVFKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYI 176

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG-AIRLGIGLCRYK 164
             L+ + D   V + LG        GR  ++   Y +A++   +CPG A+      C + 
Sbjct: 177 TALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIE---TCPGFAVAWSNLGCVFN 231

Query: 165 L-GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
             G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A
Sbjct: 232 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNA 288

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
           +    LA  ++  G   L++   +T        P    +Y NLA +   KG  ++A   Y
Sbjct: 289 VVHGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCY 345

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q
Sbjct: 346 NTALRLCSNHADSL---NNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNLASVLQQ 402

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP 402
            G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +         
Sbjct: 403 QGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA---- 458

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +  +N+  IH + G    A QS++ AL
Sbjct: 459 -DAHSNLASIHKDSGNIPEAIQSYRTAL 485



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 184/455 (40%), Gaps = 29/455 (6%)

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
           D  N   LL  + + F   R   S +F   A++ +P    A    +G    + GQL +A 
Sbjct: 80  DSTNTGVLLLLSSIHFQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVFKERGQLQEAL 138

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--YCAMALNYLA 230
             ++RA++L P+ ++  + LA   + A +   +   ++    A +  P  YC  +   L 
Sbjct: 139 DNYRRAVRLKPDFIDGYINLAAALVAARD---MESAVQAYITALQYNPDLYCVRS--DLG 193

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
           N     G+   +E+     L      P  + ++ NL   ++++G+   A  ++    K +
Sbjct: 194 NLLKALGR---LEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFE---KAV 247

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
                F+  Y  LG V  +   F  A+  + + L + P+N      L  +Y + G I+ A
Sbjct: 248 TLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLA 307

Query: 351 QELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 409
            +  R+A ++ P    A+ +L   L        A D + TA  L     +      LNN+
Sbjct: 308 IDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADS-----LNNL 362

Query: 410 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 469
             I  E+G  E A + +  AL   ++     + +        AS+LQ +  +L     + 
Sbjct: 363 ANIKREQGYIEEATRLYLKAL--EVFPDFAAAHSNL------ASVLQ-QQGKLKEALMHY 413

Query: 470 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 529
              + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N
Sbjct: 414 KEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGN 473

Query: 530 LQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
           +  +I+    ALK+   +P+A   L        DW
Sbjct: 474 IPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDW 508



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 48/338 (14%)

Query: 38  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
           I       V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L    
Sbjct: 213 IETCPGFAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 268

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
             ++A +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    
Sbjct: 269 IFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDA-YCN 327

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +     + GQ+ +A   +  AL+L   + ++L  LA +     E   I +      +A E
Sbjct: 328 LANALKEKGQVKEAEDCYNTALRLCSNHADSLNNLANIK---REQGYIEEATRLYLKALE 384

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           ++P  A A                                   HS  NLA     +G  +
Sbjct: 385 VFPDFAAA-----------------------------------HS--NLASVLQQQGKLK 407

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A ++Y  +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L
Sbjct: 408 EALMHYKEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNL 464

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
             I+   G I +A +  R A K+ P    A+ +L   L
Sbjct: 465 ASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 502


>gi|435850371|ref|YP_007311957.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
 gi|433661001|gb|AGB48427.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
          Length = 504

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 136/313 (43%), Gaps = 20/313 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q Y+KA  +D  +   W  KG  L    + E+A  A+    E +     A   +  V 
Sbjct: 115 AIQAYDKAIELDPLDGFAWYNKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVL 174

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           +   RY ++++ + +A  ++     A     G+   +LG   +A +A   A+ LDP+   
Sbjct: 175 YYTKRYEEAIQAFDKATGINKKDAKAWNYK-GVSYIELGMNYEAMEALNNAIGLDPQYST 233

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           AL     +    N+     + +    +A EI P  A A NY        G++    Q  +
Sbjct: 234 ALSNKGYL---LNQMRRYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFD 290

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG----- 302
            A+ +    P  +  +Y    + +   +YEKA       ++ +NK  E I P Y      
Sbjct: 291 KAIQLD---PLDAEIWYYKGTALYEMKEYEKA-------LENLNKATE-INPQYAEAWND 339

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G+    + ++ +A+  F+KV+E+ P N     + G+   ++ + ++A +   KA +++P
Sbjct: 340 KGRAHYNINEYENAIQAFDKVIELEPQNDAAWDSKGNSLRRMAEYDEAIQAYDKAIELNP 399

Query: 363 RDAQAFIDLGELL 375
           +++  ++  G  L
Sbjct: 400 QNSWTWMHKGYTL 412



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 136/308 (44%), Gaps = 20/308 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q ++KA+ I+  +   W  KG   +  G   +A  A    +  D     AL  +  + 
Sbjct: 183 AIQAFDKATGINKKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLL 242

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK---ARQAFQRALQLDPE 184
               RY +++    +A+++ P    A         Y L ++GK   A QAF +A+QLDP 
Sbjct: 243 NQMRRYEEAIRVCDQAIEIEPQDAKAWNYK----GYALNEMGKNEEAIQAFDKAIQLDPL 298

Query: 185 NVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           + E       A+ +++  E     K +E + +A EI P  A A N      +   ++   
Sbjct: 299 DAEIWYYKGTALYEMKEYE-----KALENLNKATEINPQYAEAWNDKGRAHYNINEY--- 350

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           E   +    V    P    ++ +   S     +Y++A   Y  ++ E+N  + + + + G
Sbjct: 351 ENAIQAFDKVIELEPQNDAAWDSKGNSLRRMAEYDEAIQAYDKAI-ELNPQNSWTWMHKG 409

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
                  +G    A   F+KV+E+ P+N +   + G+   ++G+I+++ +   KA +++P
Sbjct: 410 Y--TLYGMGKLEEAEQVFDKVIELNPENSDAWYSKGNTLRRMGKIDESIQAYDKAIELNP 467

Query: 363 RDAQAFID 370
             A A+ +
Sbjct: 468 DYAVAWYN 475



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 131/312 (41%), Gaps = 10/312 (3%)

Query: 61  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           +EE +  + + ++KA  ++      W GKG  L   G+ E+A  A+   ++   +NV   
Sbjct: 40  EEEKYSESIEAFDKAIELNPQNADAWAGKGMALSETGKNEEAIQAYDKAIQLKPNNVKFW 99

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
             +       GRY ++++ Y +A+++ P   G      G+  + + +  +A QA+  A +
Sbjct: 100 SEKGIALRKMGRYEEAIQAYDKAIELDP-LDGFAWYNKGIALFHIKKYEEAIQAYDEATE 158

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           L+P    A      +           + ++   +A  I    A A NY    +   G ++
Sbjct: 159 LEPRFAMAWYNKGYVLYYTKR---YEEAIQAFDKATGINKKDAKAWNYKGVSYIELGMNY 215

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
              +    A+ +    P  S +  N     +    YE+A +       EI       + Y
Sbjct: 216 EAMEALNNAIGLD---PQYSTALSNKGYLLNQMRRYEEA-IRVCDQAIEIEPQDAKAWNY 271

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
            G    ++  G    A+  F+K +++ P + E     G    ++ + EKA E L KA +I
Sbjct: 272 KGYALNEM--GKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYEMKEYEKALENLNKATEI 329

Query: 361 DPRDAQAFIDLG 372
           +P+ A+A+ D G
Sbjct: 330 NPQYAEAWNDKG 341



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 139/337 (41%), Gaps = 56/337 (16%)

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV- 186
           F   +YS+S+E + +A++++P    A   G G+   + G+  +A QA+ +A+QL P NV 
Sbjct: 39  FEEEKYSESIEAFDKAIELNPQNADAW-AGKGMALSETGKNEEAIQAYDKAIQLKPNNVK 97

Query: 187 ---EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
              E  +AL  M           + ++   +A E+ P    A        F   ++   E
Sbjct: 98  FWSEKGIALRKM-------GRYEEAIQAYDKAIELDPLDGFAWYNKGIALFHIKKY---E 147

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           +  +     T   P  + ++YN     +    YE+A +        INK     + Y G+
Sbjct: 148 EAIQAYDEATELEPRFAMAWYNKGYVLYYTKRYEEA-IQAFDKATGINKKDAKAWNYKGV 206

Query: 304 GQVQLKLG---------------DFRSALTN-----------------FEKVLEIYPDNC 331
             ++L +                 + +AL+N                  ++ +EI P + 
Sbjct: 207 SYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRRYEEAIRVCDQAIEIEPQDA 266

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 391
           +     G+   ++G+ E+A +   KA ++DP DA+ +   G  L        +  ++ A 
Sbjct: 267 KAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYE------MKEYEKAL 320

Query: 392 TLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 426
             L KA E  P   E  N+ G  H+   E+E+A Q+F
Sbjct: 321 ENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAF 357


>gi|428218538|ref|YP_007103003.1| hypothetical protein Pse7367_2313 [Pseudanabaena sp. PCC 7367]
 gi|427990320|gb|AFY70575.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
           sp. PCC 7367]
          Length = 400

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 17/277 (6%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G +L A G V   + A  +   A+ D V  L+ Q    + +     +L  Y++A Q+ P 
Sbjct: 55  GFILCAGGLV--GTMAIPLTAWAETDPVD-LIKQGRELWQKDNIDGALAAYRQAAQLEPD 111

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 209
               I+  IG    +      A  AFQ+A Q+D  +V A  AL     Q+ +     + +
Sbjct: 112 N-ARIQTSIGYLLTQKNDFAGAIAAFQKATQIDNRDVRAFNALGYAYAQSRD---YNRAL 167

Query: 210 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE--QLTETALAVTNHGPTKSHSYYNLA 267
              ++A  + P  A A   +   F    Q    E  Q+ +  +A++   P    ++ NL 
Sbjct: 168 TAYRQAINLEPKNAEAHQSIG--FILVQQEKFDEAAQIYQKLIAIS---PRNLRAHLNLG 222

Query: 268 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 327
             +  KGD + A   Y+ +  EI   +  +  ++ +G + L   DF +A+  FE+VL+I 
Sbjct: 223 YIFQRKGDLKAASDIYVKA-DEIAPLNADV--WFAIGSLLLVQNDFDTAMQKFERVLDIN 279

Query: 328 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
           P + E   A+  + V  G++++A    RK A   P D
Sbjct: 280 PRHPEANVAIARVLVGKGEVDEAISAYRKVAAARPSD 316



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 8/133 (6%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +  LG    +  D+  ALT + + + + P N E  +++G I VQ  + ++A ++ +K   
Sbjct: 150 FNALGYAYAQSRDYNRALTAYRQAINLEPKNAEAHQSIGFILVQQEKFDEAAQIYQKLIA 209

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKG 417
           I PR+ +A ++LG +             K A  +  KA E  P+  +V   IG +   + 
Sbjct: 210 ISPRNLRAHLNLGYIFQRKGD------LKAASDIYVKADEIAPLNADVWFAIGSLLLVQN 263

Query: 418 EFESAHQSFKDAL 430
           +F++A Q F+  L
Sbjct: 264 DFDTAMQKFERVL 276



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 7/133 (5%)

Query: 33  VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 92
           V+ + IA LNA  V++  +G +   Q +    F  A Q + +   I+   P   V   ++
Sbjct: 239 VKADEIAPLNA-DVWFA-IGSLLLVQND----FDTAMQKFERVLDINPRHPEANVAIARV 292

Query: 93  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           L+ KGEV++A SA++ V  A   +V      A +   +   S ++  Y++ L+++P  P 
Sbjct: 293 LVGKGEVDEAISAYRKVAAARPSDVAVQYAIADLYLKKESLSGAIVAYRQILRINPDDPN 352

Query: 153 A-IRLGIGLCRYK 164
           A + LG  L + K
Sbjct: 353 ANLALGKALAQQK 365



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 19/170 (11%)

Query: 527 RNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYAT 586
           +N+   +I    +A +++ +   A + LG    ++ D+ +A   +R A +  + K++ A 
Sbjct: 126 KNDFAGAIAAFQKATQIDNRDVRAFNALGYAYAQSRDYNRALTAYRQAIN-LEPKNAEAH 184

Query: 587 LSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 646
            S+G    F  ++ EK          ++A ++Y ++I     NL A    G +   KG  
Sbjct: 185 QSIG----FILVQQEK---------FDEAAQIYQKLIAISPRNLRAHLNLGYIFQRKGDL 231

Query: 647 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
             + D++ +  E A  +      DVW  +  +   Q +F  AM+ ++  L
Sbjct: 232 KAASDIYVKADEIAPLNA-----DVWFAIGSLLLVQNDFDTAMQKFERVL 276



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 1/151 (0%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A+  Y KA  I       W   G LLL + + + A   F+ VL+ +  +  A +  A V 
Sbjct: 234 ASDIYVKADEIAPLNADVWFAIGSLLLVQNDFDTAMQKFERVLDINPRHPEANVAIARVL 293

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
             +G   +++  Y++     PS   A++  I     K   L  A  A+++ L+++P++  
Sbjct: 294 VGKGEVDEAISAYRKVAAARPS-DVAVQYAIADLYLKKESLSGAIVAYRQILRINPDDPN 352

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEI 218
           A +AL     Q    A   K + + Q+ + +
Sbjct: 353 ANLALGKALAQQKRRAEATKFLNRAQKLYTL 383


>gi|206890228|ref|YP_002249703.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742166|gb|ACI21223.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 1056

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 149/340 (43%), Gaps = 33/340 (9%)

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVH-----PSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           LG+A +    G+Y  +L  +  +L+++      +  GA    IGL   K+GQL KA   F
Sbjct: 152 LGKAALSL--GKYEKALSSFNESLKLYREKGDENSVGANLSLIGLVYSKMGQLKKALSYF 209

Query: 176 QRALQL-----DPENVEALVALAVMDL-----QANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           + AL++     DPE   ++V   + D+     Q + A    +   ++Q+   +     + 
Sbjct: 210 EEALKIAKKHNDPEGT-SIVLREIADIYSDLYQRDRAISYYQEAIEIQKKNNLRKELGVT 268

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVT---NHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
           LN L + +    Q+    Q  + AL +    N  PT +  + N+   Y   G  +KA +Y
Sbjct: 269 LNNLGSMYMDLAQYEKALQSYQEALKIAKEQNDLPTTATLFNNIGHVYAKFGRTDKAIMY 328

Query: 283 YMASV---KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI-----YPDNCET- 333
           Y  S+   K + +P   ++    +G    ++G +  AL   ++ LEI      P   ET 
Sbjct: 329 YQQSLELEKRLKRPASLVYVLNNIGMEYFRVGKYDDALKYLKEALEIDKKLNNPHLLETR 388

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDTGAALDAFKTART 392
           L  +G +Y++ G+   A+++  +  K++ R      +  G + +   TG   +A K A  
Sbjct: 389 LNCIGAVYLKQGRYRDAEQIFLERKKLEDRIKPNRLLHAGLVEVYLKTGRYDEALKLANQ 448

Query: 393 LLK--KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           +    +  +   IE    +G+    KG  + A  +  +A+
Sbjct: 449 IPPSWQDSKNRHIEYYTQVGLALKGKGNLQEAAVNLMNAI 488


>gi|348516822|ref|XP_003445936.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Oreochromis niloticus]
          Length = 1048

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 261

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 318

Query: 286 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +++        + P +      L  ++ + G    A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASV 370

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 400 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 93

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 393
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 323 CPTHADS-----LNNLANIKREQGYIEEAVQLYRKAL----------------------- 354

Query: 454 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 513
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 355 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 394

Query: 514 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 573
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 395 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 454

Query: 574 ASD-ATDGKDSYATLS 588
           A     D  D+Y  L+
Sbjct: 455 ALKLKPDFPDAYCNLA 470


>gi|300868210|ref|ZP_07112842.1| hypothetical protein OSCI_3590059 [Oscillatoria sp. PCC 6506]
 gi|300333834|emb|CBN58026.1| hypothetical protein OSCI_3590059 [Oscillatoria sp. PCC 6506]
          Length = 539

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 176/402 (43%), Gaps = 55/402 (13%)

Query: 37  RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWV--GKGQLLL 94
           R AI    G +  Y+   E  Q + E    LA   Y KA  I ++    W+    G  L 
Sbjct: 172 RQAIALNPGSWELYMKLAEALQGKNELQEALAG--YGKA--IQLNPDFYWLRYKLGTALA 227

Query: 95  AKGEVEQASSAFKIV--LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 152
           A G+ E+A +++K    LE     V   LG       R  + +++  YK+ L++ P    
Sbjct: 228 ATGQWEEAIASYKQAAELEPGAAIVHHYLGHTLAIVQR--WEEAIVSYKKTLELSPESAV 285

Query: 153 AIR-LGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQA-NEAAGIRKG 208
             + LG  L R  L +  +A  +++++++L+P ++E    +  A+  LQ  +EA G  + 
Sbjct: 286 VYQHLGDALAR--LQRWSEAVASYRKSVKLEPNSLEGQDHLGFALTQLQQWDEAIGCYR- 342

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
                +A E+ P   +   +L +     G     EQ  + A                 A 
Sbjct: 343 -----KALELSPNSDVVYCHLGDALRQRG----TEQDLDEA-----------------AS 376

Query: 269 SYHSKGDYEKAGLYYMASVKEINKP--HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
            YH   +     L     V E+ KP  HE  F    LGQ     G ++ A+  +   ++I
Sbjct: 377 CYHKAIELTPNNLEICQKVLEM-KPIDHEAQFQ---LGQALAAQGQWQQAIEAYVLYIDI 432

Query: 327 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALD 385
            PDN E    LG      GQ ++A E  R+A  +DP  +Q++ ++GE L++ D    A++
Sbjct: 433 KPDNYEVHHLLGEALAARGQWQQAIEAYRRAVDLDPNSSQSYHNMGEALMAIDEMDKAIE 492

Query: 386 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
           A++ +  L      + P+ + NN+G    ++G+ + A  +++
Sbjct: 493 AYRQSAEL----DPDNPL-IYNNLGDALAKQGKVDEASAAYR 529



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 117/524 (22%), Positives = 220/524 (41%), Gaps = 68/524 (12%)

Query: 84  STWVGKGQLLLAKGEVEQASSAFKIVLEADRD------NVPALLGQACVEFNRGRYSDSL 137
           ST+  +G L    G+ E+A++A++  LE + D      N+  +L Q      +G+  ++ 
Sbjct: 13  STYFNQGNLFKQSGKWEEAAAAYRRCLELNPDFSWYHHNLGEVLAQ------QGKLEEAG 66

Query: 138 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE---ALVALAV 194
           + Y+RA +++P+   +   G+G    + G    A  A++RA+++ P+  E   +L     
Sbjct: 67  DCYQRACELNPNSAWSWH-GLGEMLERQGNWDGAVAAYRRAVEIYPDFYEFHNSLGKALC 125

Query: 195 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
              Q  EA G       +++A E+    A+    L       GQ   V++  E       
Sbjct: 126 FQGQLEEALGC------LRQAIELDAESALPYENLWEVLARLGQ---VDEGIECLRQAIA 176

Query: 255 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P     Y  LA +   K + ++A   Y    K I    +F +  Y LG      G + 
Sbjct: 177 LNPGSWELYMKLAEALQGKNELQEALAGYG---KAIQLNPDFYWLRYKLGTALAATGQWE 233

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+ ++++  E+ P        LGH    + + E+A    +K  ++ P  A  +  LG+ 
Sbjct: 234 EAIASYKQAAELEPGAAIVHHYLGHTLAIVQRWEEAIVSYKKTLELSPESAVVYQHLGDA 293

Query: 375 LISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL-- 430
           L      A L  +  A    +K+ +  P  +E  +++G    +  +++ A   ++ AL  
Sbjct: 294 L------ARLQRWSEAVASYRKSVKLEPNSLEGQDHLGFALTQLQQWDEAIGCYRKALEL 347

Query: 431 ---GDGIWLTLLDS---KTKTYVIDASASMLQFKDMQLFHR-FENDGNHVELPWNKVTVL 483
               D ++  L D+   +     +D +AS         +H+  E   N++E+   KV  +
Sbjct: 348 SPNSDVVYCHLGDALRQRGTEQDLDEAASC--------YHKAIELTPNNLEIC-QKVLEM 398

Query: 484 --------FNLARLLE---QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 532
                   F L + L    Q    + A VLY  I  K  +Y   +L   A+A AR   Q 
Sbjct: 399 KPIDHEAQFQLGQALAAQGQWQQAIEAYVLY--IDIKPDNYEVHHLLGEALA-ARGQWQQ 455

Query: 533 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD 576
           +IE    A+ ++     +   +G+  +  D+  KA E +R +++
Sbjct: 456 AIEAYRRAVDLDPNSSQSYHNMGEALMAIDEMDKAIEAYRQSAE 499



 Score = 43.9 bits (102), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 8/143 (5%)

Query: 290 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
           + K  + +  Y+  G +  + G +  A   + + LE+ PD       LG +  Q G++E+
Sbjct: 5   LKKNQDNVSTYFNQGNLFKQSGKWEEAAAAYRRCLELNPDFSWYHHNLGEVLAQQGKLEE 64

Query: 350 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLN 407
           A +  ++A +++P  A ++  LGE+L           +  A    ++A E  P   E  N
Sbjct: 65  AGDCYQRACELNPNSAWSWHGLGEMLERQGN------WDGAVAAYRRAVEIYPDFYEFHN 118

Query: 408 NIGVIHFEKGEFESAHQSFKDAL 430
           ++G     +G+ E A    + A+
Sbjct: 119 SLGKALCFQGQLEEALGCLRQAI 141


>gi|449664350|ref|XP_002161502.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Hydra magnipapillata]
          Length = 538

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 14/307 (4%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G LL A G +E+A + +   +E   +   A     CV   +     ++  +++A+Q+ P+
Sbjct: 159 GNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQSEIWLAIHHFEKAVQIDPN 218

Query: 150 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
              A I LG  L   ++    +A  A+ RAL ++P +      LA +     E   I   
Sbjct: 219 FLDAYINLGNVLKEARI--FDRAVTAYLRALTINPNHAIVHGNLACVYY---EQGLIDLA 273

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
           ++  +RA E+ P    A   LAN     G+    E   +TAL +    PT + S  NLA 
Sbjct: 274 VDTYKRAIELQPNFPDAYCNLANALKEQGKVEDAEDCYDTALQLC---PTHADSLNNLAN 330

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
               +G  E +   Y  +++      EF   +  L  +  + G    AL ++++ + I+P
Sbjct: 331 IKREQGLIEDSIRLYCKALEVFP---EFAAAHSNLASILQQQGKLHEALIHYKEAIRIHP 387

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 388
              +    +G+   ++  +E A +   +A +I+P  A A  +L    +  D+G   +A +
Sbjct: 388 TFADAYSNMGNALKEMQDVEGAIQCYSRAIQINPAFADAHSNLAS--VYKDSGNIAEAIQ 445

Query: 389 TARTLLK 395
           + +T LK
Sbjct: 446 SYKTALK 452



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 14/297 (4%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA +ID +    ++  G +L      ++A 
Sbjct: 185 FAVAWSNLGCVFNAQSE----IWLAIHHFEKAVQIDPNFLDAYINLGNVLKEARIFDRAV 240

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           +A+   L  + ++       ACV + +G    +++ YKRA+++ P+ P A    +     
Sbjct: 241 TAYLRALTINPNHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAY-CNLANALK 299

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + G++  A   +  ALQL P + ++L  LA +     E   I   +    +A E++P  A
Sbjct: 300 EQGKVEDAEDCYDTALQLCPTHADSLNNLANIK---REQGLIEDSIRLYCKALEVFPEFA 356

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A + LA+      Q  L E L     A+  H PT + +Y N+  +     D E A   Y
Sbjct: 357 AAHSNLAS--ILQQQGKLHEALIHYKEAIRIH-PTFADAYSNMGNALKEMQDVEGAIQCY 413

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
             ++ +IN    F   +  L  V    G+   A+ +++  L++ PD  +    L H 
Sbjct: 414 SRAI-QINP--AFADAHSNLASVYKDSGNIAEAIQSYKTALKLKPDFPDAYCNLAHC 467



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 123/309 (39%), Gaps = 12/309 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y KA     +    W   G +  A+ E+  A   F+  ++ D + + A +    V 
Sbjct: 171 AKACYLKAIETQPNFAVAWSNLGCVFNAQSEIWLAIHHFEKAVQIDPNFLDAYINLGNVL 230

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
                +  ++  Y RAL ++P+    +   +    Y+ G +  A   ++RA++L P   +
Sbjct: 231 KEARIFDRAVTAYLRALTINPN-HAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPD 289

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A   LA       E   +    +    A ++ P  A +LN LAN      +  L+E    
Sbjct: 290 AYCNLAN---ALKEQGKVEDAEDCYDTALQLCPTHADSLNNLAN---IKREQGLIEDSIR 343

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE-FIFPYYGLGQV 306
                    P  + ++ NLA     +G   +A ++Y    KE  + H  F   Y  +G  
Sbjct: 344 LYCKALEVFPEFAAAHSNLASILQQQGKLHEALIHY----KEAIRIHPTFADAYSNMGNA 399

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
             ++ D   A+  + + ++I P   +    L  +Y   G I +A +  + A K+ P    
Sbjct: 400 LKEMQDVEGAIQCYSRAIQINPAFADAHSNLASVYKDSGNIAEAIQSYKTALKLKPDFPD 459

Query: 367 AFIDLGELL 375
           A+ +L   L
Sbjct: 460 AYCNLAHCL 468



 Score = 46.6 bits (109), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L ++A    LA+    P  + +Y NL      KG  + A   Y  +VK
Sbjct: 54  LLLSSIHFQCRRLDQSAQFSSLAIK-QNPMLAEAYSNLGNVLKEKGQLKDALANYRHAVK 112

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +FI  Y  L    +  GD   A+  +   L   PD       LG++   LG++E
Sbjct: 113 L--KP-DFIDGYINLAAALVAAGDLEGAVQAYATALNYNPDLYCVRSDLGNLLKALGRLE 169

Query: 349 KAQELLRKAAKIDPRDAQAFIDLG 372
           +A+    KA +  P  A A+ +LG
Sbjct: 170 EAKACYLKAIETQPNFAVAWSNLG 193


>gi|428315210|ref|YP_007113092.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428238890|gb|AFZ04676.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 1363

 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P  S SY+ L  ++ +  ++++A   Y  ++ E+N   +F + Y  LG V ++L ++  A
Sbjct: 763 PNFSWSYHFLGETWQAMEEHDEAAAAYRKAI-ELNP--DFCWTYNNLGDVLMELSEWEDA 819

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 376
              + K++E+ PD C + + LG   V L  +E+A    RKA +++P D   +  LGE+L 
Sbjct: 820 AVAYRKLVELNPDFCWSYERLGKALVALENLEEAAAAYRKAIELNPDDCWLYNSLGEVLE 879

Query: 377 SSD 379
           S +
Sbjct: 880 SQE 882



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 125/277 (45%), Gaps = 29/277 (10%)

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           QA V    G+ ++++   + AL++ P+  GA    +G      G++ +A+Q ++ A+  +
Sbjct: 17  QAEVYLAEGKLNEAVAACESALKIEPNL-GAACQTLGKVMQVRGEIEQAKQWYEAAIDRN 75

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF-------- 234
           P   E    L ++  Q  +     K +   ++A  + P+ A A   LA  +         
Sbjct: 76  PNLPEVYANLGILYSQGKQ---WEKAIAHCEKAISLAPHFAAAYRQLARVWTQLEKREEA 132

Query: 235 --FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
             F  Q F +E    TA             +  L  S+   G  ++A   Y  ++K +N 
Sbjct: 133 ADFWYQAFNIEPNWATA-----------EEHVTLGNSFVELGKCDRAMECYSRAIK-LNP 180

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
             +    Y+ LG++ ++   +  A+ N+ + + I P++ E+  +LG  + + G++ +A  
Sbjct: 181 --QLATAYHNLGEMLVREKRWDEAIANYRQAIAINPNSFESYHSLGKTWAERGELNRAIA 238

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISS-DTGAALDAFK 388
              K+ +++P  A+A++ LG +     D  AA+  ++
Sbjct: 239 CYNKSLELNPNYARAYVGLGNVFAQKRDFDAAIKCYR 275



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 132/289 (45%), Gaps = 20/289 (6%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRD-NVPALLGQACVEFNRGR-YSDSLEFYKRALQVH 147
           G+++  +GE+EQA   ++  +  DR+ N+P +     + +++G+ +  ++   ++A+ + 
Sbjct: 52  GKVMQVRGEIEQAKQWYEAAI--DRNPNLPEVYANLGILYSQGKQWEKAIAHCEKAISLA 109

Query: 148 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 207
           P    A R  +     +L +  +A   + +A  ++P    A   + + +    E     +
Sbjct: 110 PHFAAAYR-QLARVWTQLEKREEAADFWYQAFNIEPNWATAEEHVTLGN-SFVELGKCDR 167

Query: 208 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSY 263
            ME   RA ++ P  A A + L       G+  + E+  + A+A         P    SY
Sbjct: 168 AMECYSRAIKLNPQLATAYHNL-------GEMLVREKRWDEAIANYRQAIAINPNSFESY 220

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
           ++L +++  +G+  +A   Y  S+ E+N    +   Y GLG V  +  DF +A+  + + 
Sbjct: 221 HSLGKTWAERGELNRAIACYNKSL-ELNP--NYARAYVGLGNVFAQKRDFDAAIKCYRQT 277

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           LEI  ++      LG    Q  Q ++A    RKA  I+      +++LG
Sbjct: 278 LEINDNSYWAYNCLGDALAQKQQWQEAIICYRKAIAINQNIPWFYVNLG 326



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 150/349 (42%), Gaps = 33/349 (9%)

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN-----RGRYSDSLEFYKRA 143
           + ++ LA+G++ +A +A +  L+ + +     LG AC         RG    + ++Y+ A
Sbjct: 17  QAEVYLAEGKLNEAVAACESALKIEPN-----LGAACQTLGKVMQVRGEIEQAKQWYEAA 71

Query: 144 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 203
           +  +P+ P  +   +G+   +  Q  KA    ++A+ L P    A   LA +  Q  +  
Sbjct: 72  IDRNPNLP-EVYANLGILYSQGKQWEKAIAHCEKAISLAPHFAAAYRQLARVWTQLEKR- 129

Query: 204 GIRKGMEKMQRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 261
              +  +   +AF I P  A A  +  L N F   G+    ++  E         P  + 
Sbjct: 130 --EEAADFWYQAFNIEPNWATAEEHVTLGNSFVELGK---CDRAMECYSRAIKLNPQLAT 184

Query: 262 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 321
           +Y+NL      +  +++A   Y  ++  IN P+ F   Y+ LG+   + G+   A+  + 
Sbjct: 185 AYHNLGEMLVREKRWDEAIANYRQAIA-IN-PNSF-ESYHSLGKTWAERGELNRAIACYN 241

Query: 322 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 381
           K LE+ P+       LG+++ Q    + A +  R+  +I+     A+  LG+ L      
Sbjct: 242 KSLELNPNYARAYVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWAYNCLGDAL------ 295

Query: 382 AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A    ++ A    +KA     I +  NI   +   G   +  QS+ +A+
Sbjct: 296 AQKQQWQEAIICYRKA-----IAINQNIPWFYVNLGIALTCEQSWDEAV 339



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 139/326 (42%), Gaps = 59/326 (18%)

Query: 31  ADVRYERIAILNALGVYYTY--LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVG 88
           A  RY+  AI    G Y TY  LGK   ++++ +E    A   Y  A  ++ +   ++  
Sbjct: 717 ATARYQT-AIKIKSGNYLTYHKLGKALQEKKQLDE----ARAAYQGAIELNPNFSWSYHF 771

Query: 89  KGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQV 146
            G+   A  E ++A++A++  +E + D       LG   +E +   + D+   Y++ +++
Sbjct: 772 LGETWQAMEEHDEAAAAYRKAIELNPDFCWTYNNLGDVLMELSE--WEDAAVAYRKLVEL 829

Query: 147 HPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAG 204
           +P  C    RLG  L    L  L +A  A+++A++L+P++     +L  V++ Q N    
Sbjct: 830 NPDFCWSYERLGKALV--ALENLEEAAAAYRKAIELNPDDCWLYNSLGEVLESQEN---- 883

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 264
                         +P  A+A           G+   +E             P  S  Y 
Sbjct: 884 --------------WPEAAVAF----------GRAIALE-------------PEHSWLYK 906

Query: 265 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
            L  +  ++G+ E+A   Y    K IN   +  + Y GLG   +    +  A+ N  + L
Sbjct: 907 KLGDALRNQGELERAIAIYE---KGINLDPKSCWCYEGLGLSLMAKQQWEPAIANLVQAL 963

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKA 350
           +I PD  E    +G+   Q G+ +++
Sbjct: 964 QIKPDLFEAYDNIGYALEQQGEADES 989


>gi|414870070|tpg|DAA48627.1| TPA: hypothetical protein ZEAMMB73_519907, partial [Zea mays]
 gi|414870071|tpg|DAA48628.1| TPA: hypothetical protein ZEAMMB73_519907, partial [Zea mays]
 gi|414870072|tpg|DAA48629.1| TPA: hypothetical protein ZEAMMB73_519907, partial [Zea mays]
          Length = 786

 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 157/388 (40%), Gaps = 62/388 (15%)

Query: 91  QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
            +L ++ +   A + + IVLE D  NV AL+G+      +     ++E +  A+++ P  
Sbjct: 42  NILRSRNKFADAINLYTIVLEKDGTNVEALIGKGICLQAQNLPRQAIECFTEAVKIEPGN 101

Query: 151 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQAN--EAAGIR 206
             A+    G+     G L +A +A+Q+A   DP    A   +A+ + DL  +   A    
Sbjct: 102 ASALT-HCGMIYKDEGHLVEAAEAYQKARMADPSYKPASEFLAIVLTDLGTSLKLAGNTE 160

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHS 262
           +G++K   A E+        N+ A  ++  G  +      + AL+         P  + +
Sbjct: 161 EGIQKYCEALEVD-------NHYAPAYYNLGVVYSEMMQFDMALSCYEKAALERPLYAEA 213

Query: 263 YYNLARSYHSKGDYEKAGLYY-----MASVKEINKPHEFIF------------------- 298
           Y N+   Y ++GD + A + Y     ++   EI K +  I                    
Sbjct: 214 YCNMGVIYKNRGDLDAAIICYERCLTISPNFEIAKNNMAIALTDLGTKVKIEGDINRGVA 273

Query: 299 --------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
                           Y LG    ++ +F  A+  +E  L   P   E    LG IY   
Sbjct: 274 YYKKALYYNWHYADAMYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDR 333

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI- 403
             ++KA E  + A  I P  AQ+  +LG  ++ +  G       +A ++++KA    P  
Sbjct: 334 DNLDKAVECYQMALSIKPLFAQSLNNLG--VVYTVQG----KMDSAASMIEKAIHANPTY 387

Query: 404 -EVLNNIGVIHFEKGEFESAHQSFKDAL 430
            E  NN+GV++ + G    A  +++  L
Sbjct: 388 AEAYNNLGVLYRDAGSITLAIHAYERCL 415



 Score = 46.6 bits (109), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 112/287 (39%), Gaps = 55/287 (19%)

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP--RDAQAFI-- 369
           R A+  F + ++I P N   L   G IY   G + +A E  +KA   DP  + A  F+  
Sbjct: 85  RQAIECFTEAVKIEPGNASALTHCGMIYKDEGHLVEAAEAYQKARMADPSYKPASEFLAI 144

Query: 370 ---DLG-ELLISSDT-------GAALDA--------------------FKTARTLLKKAG 398
              DLG  L ++ +T         AL+                     F  A +  +KA 
Sbjct: 145 VLTDLGTSLKLAGNTEEGIQKYCEALEVDNHYAPAYYNLGVVYSEMMQFDMALSCYEKAA 204

Query: 399 EEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 456
            E P+  E   N+GVI+  +G+ ++A   ++  L          + +  + I  +   + 
Sbjct: 205 LERPLYAEAYCNMGVIYKNRGDLDAAIICYERCL----------TISPNFEIAKNNMAIA 254

Query: 457 FKDMQLFHRFENDGNH--------VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 508
             D+    + E D N         +   W+    ++NL     ++ +   A V Y L L 
Sbjct: 255 LTDLGTKVKIEGDINRGVAYYKKALYYNWHYADAMYNLGVAYGEMLNFEMAIVFYELALH 314

Query: 509 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
                 +A   L  I K R+NL  ++E    AL +   +  +L+ LG
Sbjct: 315 FNPRCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPLFAQSLNNLG 361


>gi|113475214|ref|YP_721275.1| hypothetical protein Tery_1518 [Trichodesmium erythraeum IMS101]
 gi|110166262|gb|ABG50802.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 597

 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 131/280 (46%), Gaps = 12/280 (4%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
           +++ A   +K  ++AD+++    L        +G   +++   ++AL ++P+    + + 
Sbjct: 106 QLDNAIDCYKRAIQADKNSAEYHLNLGIALTEKGIIEEAIASLEKALTINPNY-QQVNMA 164

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDP-----ENVEALVALAVMDLQANEAAGIRKGMEKM 212
           +G      G+L KA  ++ +AL +DP     +N     AL  + +       +++     
Sbjct: 165 LGDIFQTQGKLDKAISSYIKALSIDPKYSKNQNPNNFDALLSLGMALYRRGNLKESQITY 224

Query: 213 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
           ++A EI P+    L  +A  F+  G+  + E   +   AV +  PT + ++ NL      
Sbjct: 225 EQALEINPHSTECLTNIAATFYEQGRVDIAEACYQ---AVVDLIPTSTDAHINLGFLLSQ 281

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
           +  Y++A   Y A++K+       I    GL +V  K  D+++    ++K+L++  ++ +
Sbjct: 282 QEKYDEAIECYKAALKQDQNSVNAI---AGLAEVFGKKSDWKTVFQLYQKILKLDSNSAD 338

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
               LG    ++G+ ++A     KA  I+ R  +A+ +LG
Sbjct: 339 AYAKLGISLREIGKSKEAIPQFEKAISINNRHIKAYANLG 378



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 132/323 (40%), Gaps = 52/323 (16%)

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
           K G+ + A   +EK++++ P+N + L  LG +  Q+G  + A  L++KA  ++P + +  
Sbjct: 35  KNGELQKAKVIYEKIIQLEPNNSQVLNYLGVLKAQMGDNKSAISLIKKAVNLEPLNFKYL 94

Query: 369 IDLGELLISSDTGAALDAFKTARTLLKKA--GEEVPIEVLNNIGVIHFEKGEFESA---- 422
            +LG      +T  A +    A    K+A   ++   E   N+G+   EKG  E A    
Sbjct: 95  NNLG------NTYRAFEQLDNAIDCYKRAIQADKNSAEYHLNLGIALTEKGIIEEAIASL 148

Query: 423 ---------HQSFKDALGDGIWLTL--LDSKTKTYV----IDASASMLQFKD-------- 459
                    +Q    ALGD I+ T   LD    +Y+    ID   S  Q  +        
Sbjct: 149 EKALTINPNYQQVNMALGD-IFQTQGKLDKAISSYIKALSIDPKYSKNQNPNNFDALLSL 207

Query: 460 -MQLFHRFENDGN----------HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 508
            M L+ R    GN           +E+  +    L N+A    +      A   Y+ ++ 
Sbjct: 208 GMALYRR----GNLKESQITYEQALEINPHSTECLTNIAATFYEQGRVDIAEACYQAVVD 263

Query: 509 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 568
                 DA++ L  +   +     +IE    ALK +    NA++ L ++  K  DW    
Sbjct: 264 LIPTSTDAHINLGFLLSQQEKYDEAIECYKAALKQDQNSVNAIAGLAEVFGKKSDWKTVF 323

Query: 569 ETFRAASDA-TDGKDSYATLSLG 590
           + ++      ++  D+YA L + 
Sbjct: 324 QLYQKILKLDSNSADAYAKLGIS 346



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 35/251 (13%)

Query: 159 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------------------- 199
            L  +K G+L KA+  +++ +QL+P N + L  L V+  Q                    
Sbjct: 30  ALSFHKNGELQKAKVIYEKIIQLEPNNSQVLNYLGVLKAQMGDNKSAISLIKKAVNLEPL 89

Query: 200 -----NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 254
                N      +  E++  A + Y     A    A +    G     + + E A+A   
Sbjct: 90  NFKYLNNLGNTYRAFEQLDNAIDCYKRAIQADKNSAEYHLNLGIALTEKGIIEEAIASLE 149

Query: 255 HGPTKSHSY--YNLARS--YHSKGDYEKAGLYYMASV------KEINKPHEFIFPYYGLG 304
              T + +Y   N+A    + ++G  +KA   Y+ ++       +   P+ F      LG
Sbjct: 150 KALTINPNYQQVNMALGDIFQTQGKLDKAISSYIKALSIDPKYSKNQNPNNFD-ALLSLG 208

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
               + G+ + +   +E+ LEI P + E L  +   + + G+++ A+   +    + P  
Sbjct: 209 MALYRRGNLKESQITYEQALEINPHSTECLTNIAATFYEQGRVDIAEACYQAVVDLIPTS 268

Query: 365 AQAFIDLGELL 375
             A I+LG LL
Sbjct: 269 TDAHINLGFLL 279


>gi|340623750|ref|YP_004742203.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
 gi|339904018|gb|AEK19460.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
          Length = 409

 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 131/315 (41%), Gaps = 20/315 (6%)

Query: 51  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 110
           LGKI   Q E ++    A  YYNK   ID     TW  KG  L   G  +++  AF    
Sbjct: 98  LGKIHLSQEEYDK----ALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKS- 152

Query: 111 EADRDNVPAL---LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 167
             D + +  +   LG     +  G Y  + E + +AL +  +   ++  G GLC  K  Q
Sbjct: 153 TGDYETLVLIWNDLGYC--YYQNGEYDKATECFDKALTLDGNLKYSLN-GKGLCYEKKEQ 209

Query: 168 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 227
              A + F +A+  D    +A+    +   ++ + +      EK        PYC     
Sbjct: 210 YTMAIECFDKAVCQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYF--- 266

Query: 228 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
           Y AN     G++       + A+ + +  P     +  L  SY+   +Y  +   Y  +V
Sbjct: 267 YKANSLKSLGEYEKAVLNYKKAIELDSKNPV---FWSGLGLSYNYLNEYNSSIQSYEKAV 323

Query: 288 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 347
            E+N P + I  +  LG +  K   +  ++  FEK L++  +N      LG+ Y+ L   
Sbjct: 324 -ELN-PKDDI-SWSNLGYLHYKTKKYNESIFCFEKALDLNSNNKYAWNGLGNSYLLLKNY 380

Query: 348 EKAQELLRKAAKIDP 362
           EKA     KA +IDP
Sbjct: 381 EKALMCYEKAIEIDP 395



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG+  ++  +   A   F +++E+ P+N   LK+LG I++   + +KA     K  +ID 
Sbjct: 64  LGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGKIHLSQEEYDKALYYYNKLLEIDN 123

Query: 363 RDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFE 420
              + +   G  L +  +   +++AF       K  G+ E  + + N++G  +++ GE++
Sbjct: 124 SVGKTWFYKGICLKMLGNYDESVEAFD------KSTGDYETLVLIWNDLGYCYYQNGEYD 177

Query: 421 SAHQSFKDAL 430
            A + F  AL
Sbjct: 178 KATECFDKAL 187


>gi|86609036|ref|YP_477798.1| hypothetical protein CYB_1571 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557578|gb|ABD02535.1| tetratricopeptide repeat protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 700

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 18/310 (5%)

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           LA    NKA R +  +P TW+ +G +L        A+++F  VL+ +  +      Q   
Sbjct: 339 LALNSLNKALRHNPKQPRTWLARGIVLRRLRRPSSAAASFARVLKLNPRSARVWRYQGNA 398

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
            F+  R   ++E YKR+L++    P  +  LG+ L R  LGQ   A +A +RAL+ D +N
Sbjct: 399 LFHCHRLRSAVECYKRSLRLRRRDPITLHNLGVALLR--LGQYRLASKALERALRYDADN 456

Query: 186 VEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            ++  A  V    A +  G +++     + A +I P    A   LA      GQ+   E 
Sbjct: 457 YKSWYARGV----AFQKLGYLKEACIHFEEALKIKPEHFPARYALAVAQQELGQY---EA 509

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYE--KAGLYYMASVKEINKPHEFIFPYYG 302
                  +    P  S  ++         G  E  +A    M  + E +      + ++ 
Sbjct: 510 SLRHFQRLVQQRPGSSACWFGQITGLRRLGRLEEARAACQQMIHLNERDP-----WGWFA 564

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG +  +L D   A+  + +VL++ P++   L       ++LG++E A    ++A  +DP
Sbjct: 565 LGLIYSELRDPEQAVQAYSRVLQLTPEDAVALNNRAWEALKLGKLEPALADAQQATHLDP 624

Query: 363 RDAQAFIDLG 372
           +    +  LG
Sbjct: 625 QRPAFWHTLG 634


>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
 gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 1342

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 148/348 (42%), Gaps = 31/348 (8%)

Query: 73   NKASRIDMHEP--STWVG-KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 129
            N  S++   +P  +T+ G +G   L   E  QA + +   ++ D  N     G+      
Sbjct: 994  NDWSQVIKFDPKDATYYGLRGNTYLLSKEYRQAINDYTQAIKIDPKNANYYSGRGIAHHF 1053

Query: 130  RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
               Y  +++ Y  A+++ P     +R   G    +L +   A   + +A+QLDP+N    
Sbjct: 1054 LEDYKQAIDNYTEAIKIDPKKIINLR---GAAYLQLKEYKLAIDDYNQAIQLDPKNAIYY 1110

Query: 190  VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
                   LQ  +    ++ +     A ++ P          N  ++  + F   QL +  
Sbjct: 1111 GTRGDAYLQLKD---YKQAINDYTHAIQLDP---------KNAIYYGTRGFAYLQLKDYK 1158

Query: 250  LAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            LA+ ++       P  +  Y     +Y    D+++A   Y  ++K   KP +F   YY  
Sbjct: 1159 LAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDYTQAIKL--KP-DFTEAYYVR 1215

Query: 304  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
            G     L D++ A+ ++ + +++ PD  E    LG +  ++G++E A    R A KI+  
Sbjct: 1216 GIAHYFLKDYKQAIDDWNQAIKLKPDYPEAYTNLGIVSYEMGEVETAINYWRNAIKINSN 1275

Query: 364  DAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 410
             A+A + LG  L    D  A L + +TA  L K+ G+   IE L   G
Sbjct: 1276 FAEAHLALGVALYGKGDQEAGLKSAETALKLDKRYGK---IEFLKENG 1320



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 55/304 (18%), Positives = 127/304 (41%), Gaps = 30/304 (9%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           Y+KA +I+ +    W  +G+LL    +  +A ++F   +    +       +        
Sbjct: 595 YDKALKINPNFAQAWKDRGRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLK 654

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEA 188
           R+ +++E Y ++++++P      +    +  +   +L   RQA     +A+QLDP++   
Sbjct: 655 RFPEAIEAYNQSIKINP----LFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDA-- 708

Query: 189 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 248
            V+     L   +    ++ +    +A ++ P          N  ++  +    E L E 
Sbjct: 709 -VSYNFRGLLYGQLEEYKQSIADSTQAIQLDP---------KNAKYYNSRGIAYEGLKEY 758

Query: 249 ALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
             A+ ++       P  +  Y +   +Y    DY++    Y  +++   K       YYG
Sbjct: 759 KQAINDYTQAIQLDPKNAKYYNSRGIAYSQLKDYKQVIADYTQAIQLDPKDAT----YYG 814

Query: 303 L-GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
           + G    +L D++ A+ ++ + +++ P +       G  Y +L   ++A   L +  + D
Sbjct: 815 MRGGAYSELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRD 874

Query: 362 PRDA 365
           P++A
Sbjct: 875 PKNA 878



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 135/345 (39%), Gaps = 84/345 (24%)

Query: 153  AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA------------------V 194
            AIR GI    YKL +  +A   + + +Q+DP+N     A                    V
Sbjct: 943  AIRAGI---YYKLKEYKQAIDDYNQVIQIDPQNATYYGARGFAYFKLKEYKQAINDWSQV 999

Query: 195  MDLQANEAA--GI-----------RKGMEKMQRAFEIYPYCAMALNY-----LANHFF-- 234
            +     +A   G+           R+ +    +A +I P  A   NY     +A+HF   
Sbjct: 1000 IKFDPKDATYYGLRGNTYLLSKEYRQAINDYTQAIKIDPKNA---NYYSGRGIAHHFLED 1056

Query: 235  ---------------------FTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLA 267
                                   G  +L  QL E  LA+ ++       P  +  Y    
Sbjct: 1057 YKQAIDNYTEAIKIDPKKIINLRGAAYL--QLKEYKLAIDDYNQAIQLDPKNAIYYGTRG 1114

Query: 268  RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-GQVQLKLGDFRSALTNFEKVLEI 326
             +Y    DY++A   Y  +++    P   I  YYG  G   L+L D++ A+ ++ + ++I
Sbjct: 1115 DAYLQLKDYKQAINDYTHAIQL--DPKNAI--YYGTRGFAYLQLKDYKLAINDYTQAIKI 1170

Query: 327  YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALD 385
             P N     A G  Y QL   ++A +   +A K+ P   +A+   G       D   A+D
Sbjct: 1171 DPKNATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLKDYKQAID 1230

Query: 386  AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             +  A  L      + P E   N+G++ +E GE E+A   +++A+
Sbjct: 1231 DWNQAIKL----KPDYP-EAYTNLGIVSYEMGEVETAINYWRNAI 1270


>gi|195382543|ref|XP_002049989.1| GJ20442 [Drosophila virilis]
 gi|194144786|gb|EDW61182.1| GJ20442 [Drosophila virilis]
          Length = 1050

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 99/454 (21%), Positives = 188/454 (41%), Gaps = 25/454 (5%)

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
           D  N   LL  + + F   R   S +F   A++ +P    A    +G    + GQL +A 
Sbjct: 71  DSTNTGVLLLLSSIHFQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVYKERGQLQEAL 129

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEA-AGIRKGMEKMQRAFEIYPYCAMALNYLAN 231
             ++RA++L P+ ++  + LA   + A +  + ++  +  +Q   E+Y  C  +   L N
Sbjct: 130 DNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYITALQYNPELY--CVRS--DLGN 185

Query: 232 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
                G+   +E+     L      P  + ++ NL   ++++G+   A  ++    K + 
Sbjct: 186 LLKALGR---LEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFE---KAVT 239

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
               F+  Y  LG V  +   F  A+  + + L + P+N      L  +Y + G I+ A 
Sbjct: 240 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAI 299

Query: 352 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV 411
           +  R+A ++ P    A+ +L   L   + G   +A +   T L+        + LNN+  
Sbjct: 300 DTYRRAIELQPNFPDAYCNLANAL--KEKGQVKEAEECYNTALRLCSNHA--DSLNNLAN 355

Query: 412 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 471
           I  E+G  E A + +  AL   ++     + +        AS+LQ +  +L     +   
Sbjct: 356 IKREQGFIEEATRLYLKAL--EVFPDFAAAHSNL------ASVLQ-QQGKLKEALMHYKE 406

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
            + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N+ 
Sbjct: 407 AIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNIP 466

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 565
            +I+    ALK+   +P+A   L        DW 
Sbjct: 467 EAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWT 500



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 166/388 (42%), Gaps = 28/388 (7%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 112 YSNLGNVYKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYI 167

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG-AIRLGIGLCRYK 164
             L+ + +   V + LG        GR  ++   Y +A++   +CPG A+      C + 
Sbjct: 168 TALQYNPELYCVRSDLGNLLKAL--GRLEEAKACYLKAIE---TCPGFAVAWSNLGCVFN 222

Query: 165 L-GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
             G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A
Sbjct: 223 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNA 279

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
           +    LA  ++  G   L++   +T        P    +Y NLA +   KG  ++A   Y
Sbjct: 280 VVHGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEECY 336

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q
Sbjct: 337 NTALRLCSNHADSL---NNLANIKREQGFIEEATRLYLKALEVFPDFAAAHSNLASVLQQ 393

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP 402
            G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +         
Sbjct: 394 QGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA---- 449

Query: 403 IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            +  +N+  IH + G    A QS++ AL
Sbjct: 450 -DAHSNLASIHKDSGNIPEAIQSYRTAL 476



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 48/338 (14%)

Query: 38  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 97
           I       V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L    
Sbjct: 204 IETCPGFAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 259

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
             ++A +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    
Sbjct: 260 IFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDA-YCN 318

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +     + GQ+ +A + +  AL+L   + ++L  LA +     E   I +      +A E
Sbjct: 319 LANALKEKGQVKEAEECYNTALRLCSNHADSLNNLANIK---REQGFIEEATRLYLKALE 375

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           ++P  A A                                   HS  NLA     +G  +
Sbjct: 376 VFPDFAAA-----------------------------------HS--NLASVLQQQGKLK 398

Query: 278 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 337
           +A ++Y  +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L
Sbjct: 399 EALMHYKEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNL 455

Query: 338 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
             I+   G I +A +  R A K+ P    A+ +L   L
Sbjct: 456 ASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 493


>gi|223935536|ref|ZP_03627453.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223895946|gb|EEF62390.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 1072

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 146/311 (46%), Gaps = 33/311 (10%)

Query: 130 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 189
           RG Y+++L  Y +  Q  P  P  +    GL   ++ +  +A++AF++ L + P+N+ AL
Sbjct: 414 RGNYAEALGIYDQLRQSFPHEPQYV-YKAGLTFIQMNKKEEAQKAFEKVLVMSPDNLPAL 472

Query: 190 VALAVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLVEQLTET 248
             +  +D+QA + +     ++K     +I P  C +             + F  ++ T+ 
Sbjct: 473 EQIVNLDIQAQDYSKALSLLDKEMANEKIVPELCVL-----------QARIFESQKATQK 521

Query: 249 ALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE--INKPHEFIFPYYG 302
           A+A         P    +Y+ LAR Y      E+A    + +++E  +  P +       
Sbjct: 522 AVAALKRAIELNPQMRIAYFLLARLYMESKQNEQA----ITNLQEVMVKNPKD-TSALMM 576

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ-LGQIEKAQELLRKAAKID 361
           +G ++ +  +F +A   +EK++ I P+    L  L ++Y +   Q++KA E+ R+A ++ 
Sbjct: 577 IGTIRDQEKNFAAARDAYEKLIAIDPNFSAALNNLAYLYSEHFNQLDKALEMARRARELM 636

Query: 362 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEF 419
             D      LG +L      AA      A TL ++A +++P   E+  ++G+ ++  G+ 
Sbjct: 637 VYDPSTADTLGWILFKKAQYAA------ALTLNREAADKLPGEPEIQFHVGMGYYMLGKE 690

Query: 420 ESAHQSFKDAL 430
           ESA    + AL
Sbjct: 691 ESARLYLQRAL 701



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 40/318 (12%)

Query: 109 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 168
           V+  D  N         +   +GR+S +  F  RA ++ P+    I + IG   +  G++
Sbjct: 52  VIRKDPKNAHGFANLGAIYVEQGRFSRAFTFLSRARELDPTGDPGIHMKIGSLYFSAGRM 111

Query: 169 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 228
            +A++  +  L+  P++ +A + LA +   + E    R+ ++K+  A    P C +A++ 
Sbjct: 112 KEAQEEVKYVLEKRPQDQDAPMLLADLASTSQEVEQTRQALQKLLAAGGYKPACEVAIST 171

Query: 229 L-------------------------ANHFFFTGQHFLVEQLTETALAV-------TNHG 256
           L                           +      H +  ++ E   A+       + H 
Sbjct: 172 LLIKQNNLKGAEEAINRALDIDKKFGPAYLALANLHLIKNEVKEAEQALKAAADNASAHS 231

Query: 257 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 316
           P +    Y L +  H  G+ E+  +   A V+   K  + +  +  L +  L    F  A
Sbjct: 232 PRRVR--YALFKIQH--GEMEQGKVLLKAIVQ---KTPDNLPAWQALAETALSEKQFDEA 284

Query: 317 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELL 375
           +   +KVL   P+N + L+  G  Y+  G   KA     K  ++ P+  QAF  L    +
Sbjct: 285 MAIIDKVLIRDPENFDFLQLHGRTYLGKGDSAKALAEFEKTVRLYPQSPQAFYHLALAQM 344

Query: 376 ISSDTGAALDAFKTARTL 393
           +++D+  AL + K A  L
Sbjct: 345 VANDSPKALGSLKQALAL 362



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 147/381 (38%), Gaps = 79/381 (20%)

Query: 42  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID-MHEPSTWVGKGQLLLAKGEVE 100
           NA G  +  LG I  +Q      F  A  + ++A  +D   +P   +  G L  + G ++
Sbjct: 59  NAHG--FANLGAIYVEQG----RFSRAFTFLSRARELDPTGDPGIHMKIGSLYFSAGRMK 112

Query: 101 QASSAFKIVLEA---DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG---AI 154
           +A    K VLE    D+D  P LL       +    S  +E  ++ALQ   +  G   A 
Sbjct: 113 EAQEEVKYVLEKRPQDQD-APMLLA------DLASTSQEVEQTRQALQKLLAAGGYKPAC 165

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
            + I     K   L  A +A  RAL +D +   A +ALA + L  NE     + ++    
Sbjct: 166 EVAISTLLIKQNNLKGAEEAINRALDIDKKFGPAYLALANLHLIKNEVKEAEQALK---- 221

Query: 215 AFEIYPYCAMALNYLAN------HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
                   A A N  A+      +  F  QH  +EQ      A+    P    ++  LA 
Sbjct: 222 --------AAADNASAHSPRRVRYALFKIQHGEMEQGKVLLKAIVQKTPDNLPAWQALAE 273

Query: 269 SYHSKGDYEKAGLYYMASVKE--INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 326
           +  S+  +++A    MA + +  I  P  F F     G+  L  GD   AL  FEK + +
Sbjct: 274 TALSEKQFDEA----MAIIDKVLIRDPENFDFLQLH-GRTYLGKGDSAKALAEFEKTVRL 328

Query: 327 YPDNCETL--------------KALG--------------------HIYVQLGQIEKAQE 352
           YP + +                KALG                     IY++ G +  A  
Sbjct: 329 YPQSPQAFYHLALAQMVANDSPKALGSLKQALALNRSYPEAQLLSAEIYIRSGDLNSAVA 388

Query: 353 LLRKAAKIDPRDAQAFIDLGE 373
           LL +  +  PR  QA + L E
Sbjct: 389 LLTQLVRQQPRLVQAQLLLAE 409


>gi|72383070|ref|YP_292425.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002920|gb|AAZ58722.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 750

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 135/314 (42%), Gaps = 30/314 (9%)

Query: 258 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 317
           T      N A  +H +G+  +A  YY   + +    H  +F  YG   +   LG  + A+
Sbjct: 43  TSKQKIINQAIKFHLQGNILEAKKYYQYIIDQGFNDHR-VFANYG--AILRDLGKLKDAV 99

Query: 318 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 377
               + ++I P+  E    +G I+  LG ++ A+   RKA +I+P  A A+ +LG  +I 
Sbjct: 100 LAVREAIKINPNFAEAYCNMGIIFKDLGNLQDAEFYTRKAIQINPDSALAYSNLG--IIL 157

Query: 378 SDTGAALDA-FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 436
            D G   DA F T + +  +    +P E  +N+G+I  + G  + A  S++ A+   I  
Sbjct: 158 KDLGNLQDAEFYTRKAI--QINPNLP-EAYSNLGIILKDLGNLQDAEFSYRKAI--QINP 212

Query: 437 TLLDSKTKTYVIDASASMLQ------FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 490
            L ++     +I      LQ       K +Q+  +  N  N             NL  +L
Sbjct: 213 NLPEAYFNLGIILKDLGNLQDAEFSYRKAIQIKPKLANSHN-------------NLGIIL 259

Query: 491 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 550
           + +     A + YR  +    DY +AY  L +  K + N   +I     ALK+N +  +A
Sbjct: 260 KDLGKLQDAELSYRKAIQINPDYAEAYSNLGSTLKEQGNFTDAINQFKHALKLNNELTSA 319

Query: 551 LSMLGDLELKNDDW 564
            + L   +    DW
Sbjct: 320 KAGLMSTKGNICDW 333



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 13/236 (5%)

Query: 165 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 224
           LG+L  A  A + A++++P   EA   + ++     +   ++      ++A +I P  A+
Sbjct: 92  LGKLKDAVLAVREAIKINPNFAEAYCNMGII---FKDLGNLQDAEFYTRKAIQINPDSAL 148

Query: 225 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 284
           A + L       G     E  T  A+ +    P    +Y NL       G+ + A   Y 
Sbjct: 149 AYSNLGIILKDLGNLQDAEFYTRKAIQIN---PNLPEAYSNLGIILKDLGNLQDAEFSYR 205

Query: 285 ASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
            +++   N P      Y+ LG +   LG+ + A  ++ K ++I P    +   LG I   
Sbjct: 206 KAIQINPNLPEA----YFNLGIILKDLGNLQDAEFSYRKAIQIKPKLANSHNNLGIILKD 261

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 399
           LG+++ A+   RKA +I+P  A+A+ +LG  L   + G   DA    +  LK   E
Sbjct: 262 LGKLQDAELSYRKAIQINPDYAEAYSNLGSTL--KEQGNFTDAINQFKHALKLNNE 315



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 9/206 (4%)

Query: 75  ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 134
           A +I+ +    +   G +    G ++ A    +  ++ + D+  A      +  + G   
Sbjct: 105 AIKINPNFAEAYCNMGIIFKDLGNLQDAEFYTRKAIQINPDSALAYSNLGIILKDLGNLQ 164

Query: 135 DSLEFYKR-ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 193
           D+ EFY R A+Q++P+ P A    +G+    LG L  A  ++++A+Q++P   EA   L 
Sbjct: 165 DA-EFYTRKAIQINPNLPEAYS-NLGIILKDLGNLQDAEFSYRKAIQINPNLPEAYFNLG 222

Query: 194 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 253
           ++     +   ++      ++A +I P  A + N L       G+    E     A+ + 
Sbjct: 223 II---LKDLGNLQDAEFSYRKAIQIKPKLANSHNNLGIILKDLGKLQDAELSYRKAIQI- 278

Query: 254 NHGPTKSHSYYNLARSYHSKGDYEKA 279
              P  + +Y NL  +   +G++  A
Sbjct: 279 --NPDYAEAYSNLGSTLKEQGNFTDA 302



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 1/123 (0%)

Query: 71  YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 130
           Y  KA +I+ + P  +   G +L   G ++ A  +++  ++ + +   A      +  + 
Sbjct: 169 YTRKAIQINPNLPEAYSNLGIILKDLGNLQDAEFSYRKAIQINPNLPEAYFNLGIILKDL 228

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G   D+   Y++A+Q+ P    +    +G+    LG+L  A  ++++A+Q++P+  EA  
Sbjct: 229 GNLQDAEFSYRKAIQIKPKLANS-HNNLGIILKDLGKLQDAELSYRKAIQINPDYAEAYS 287

Query: 191 ALA 193
            L 
Sbjct: 288 NLG 290


>gi|266619147|ref|ZP_06112082.1| putative tetratricopeptide repeat-containing domain protein,
           partial [Clostridium hathewayi DSM 13479]
 gi|288869338|gb|EFD01637.1| putative tetratricopeptide repeat-containing domain protein
           [Clostridium hathewayi DSM 13479]
          Length = 560

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 12/269 (4%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
           E ++A S     +  ++D +   L +  +  +  +Y+++L  Y  A +V+   P ++   
Sbjct: 84  EFKEALSHLAEAIRNNKDRMQYRLVRGNIYLDMKKYNEALTEYASAAEVYHDSP-SLFFN 142

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA----AGIRKGMEKMQ 213
            GLC        +A + F++AL+L     +A   LA    +  E     A     +  + 
Sbjct: 143 RGLCYEGKKMKVQAAENFEKALELQEGYRDACEKLADYYREKYENQYRRADFDTAIAYIS 202

Query: 214 RAFEIYPYCAMALNYLANH-FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 272
           R   +   C     YL +    +     L E + +   A+T + P    +Y NL   Y  
Sbjct: 203 RQIAVTENCY----YLVHRGLIYMNAMELDEAIRDFEKALT-YVPEDWAAYNNLGCCYKY 257

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
            G +E+A  Y+  +V E  +  + + PY  +      LGD+R A+  +EK L+++P+   
Sbjct: 258 LGRFEEAVKYFEKAV-EYMEDSKSLLPYSNMADCYEALGDYRKAIECYEKDLKLFPEYMS 316

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKID 361
             K +G +Y  LG+ EKA+E      K+D
Sbjct: 317 FWKEIGQLYAYLGEYEKAEEAYGHTTKMD 345


>gi|218780050|ref|YP_002431368.1| hypothetical protein Dalk_2207 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761434|gb|ACL03900.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 661

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 16/308 (5%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q + +A  +    P+ +V + +   A G+ E+A + F   +    D        A   
Sbjct: 100 AVQDFTQAINMIARFPAAYVQRAKSYAALGDYEKARADFDAAIALLPDQAWPYREIAGFC 159

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
             +G Y  +L +Y +AL++ P    A+   +G  +   G   K  Q    A + DP++ E
Sbjct: 160 SQQGNYGQALVYYLKALEIEPDN-AALMCLMGKAQADAGYPEKGIQTCLNAAKSDPQSAE 218

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
             +    M L  ++       +E+  +A  + P    AL   A  +   G++   ++   
Sbjct: 219 PYL---TMGLIYSKEGDHYAAVEQYTKAMVLDPGSNQALGRRALAYAAAGEY---DKALA 272

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV- 306
            A  V    P K+  YY L   Y  + + EKA   Y  ++ EI  P+E   P   LGQ  
Sbjct: 273 DAQKVVADDPDKALGYYYLGSIYTQRNEPEKAYESYTKAL-EIT-PNE---PALYLGQAH 327

Query: 307 --QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
             +LK GD+  AL N ++ + ++P         G+IY  +GQ  KA E   KA +++P+ 
Sbjct: 328 AARLK-GDYDLALKNADEAIALFPGKDSLYFERGNIYEIMGQKPKALEDYLKAVELNPQS 386

Query: 365 AQAFIDLG 372
            Q    LG
Sbjct: 387 VQGHFRLG 394



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 11/196 (5%)

Query: 201 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 260
           + A + + +E +  A ++ P  A+ L      +  TG H   EQ  +      N      
Sbjct: 59  DPATMDQAIEDLSAAAKLSPDNAVLLFQRGGAYARTGDH---EQAVQDFTQAINMIARFP 115

Query: 261 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
            +Y   A+SY + GDYEKA   + A++  +  P +  +PY  +     + G++  AL  +
Sbjct: 116 AAYVQRAKSYAALGDYEKARADFDAAIALL--PDQ-AWPYREIAGFCSQQGNYGQALVYY 172

Query: 321 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 380
            K LEI PDN   +  +G      G  EK  +    AAK DP+ A+ ++ +G  LI S  
Sbjct: 173 LKALEIEPDNAALMCLMGKAQADAGYPEKGIQTCLNAAKSDPQSAEPYLTMG--LIYSKE 230

Query: 381 G---AALDAFKTARTL 393
           G   AA++ +  A  L
Sbjct: 231 GDHYAAVEQYTKAMVL 246


>gi|386813638|ref|ZP_10100862.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403135|dbj|GAB63743.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 405

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 145/351 (41%), Gaps = 56/351 (15%)

Query: 98  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 157
           ++++A   +  V+EAD +   A  G+  V F   R  D+   +++A+ V  +   A +  
Sbjct: 41  KLDEALVEYTKVIEADPNLAEAYYGRGKVYFELERLEDAAADFRKAIDVKSNYIDAHK-K 99

Query: 158 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 217
           +     K+G      Q   +A+Q DP+N    V L V   +  +       +E+ ++A E
Sbjct: 100 LAETFMKIGAPDDEFQKRFKAIQNDPDNAMGYVDLGVFYHKLEKDID---AIEQYKQALE 156

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 277
           + P  +  L  L   +   G +   E + + A+ +    PT  +++YNLA + H +G  +
Sbjct: 157 LDPNNSFILYNLGVGYLDMGLYEDAETIFKQAIEIN---PTHDNAHYNLAVALHKRGKID 213

Query: 278 KAGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDN-- 330
           +        +KE+NK  E + P Y       G ++L+   F  A+  + K +EI PDN  
Sbjct: 214 EC-------IKELNKTLE-VNPKYSNSYVIFGLIKLREKKFDEAIAQYNKAMEIDPDNLE 265

Query: 331 -------------------CETLKAL-------------GHIYVQLGQIEKAQELLRKAA 358
                               E +K L             G IY +  +++KA E   K A
Sbjct: 266 ARYQRAIVFALQERYDDALAENMKILEKNPKHASAAYNIGVIYHRTDRLDKAMEWYDKVA 325

Query: 359 -KIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLN 407
            KIDP    A+   G+L  +  D   A   + T   + K    + P  V N
Sbjct: 326 KKIDPLYEDAYYTRGQLYSMKGDHSKAYSDYLTYAMITKWRTGKDPAVVYN 376



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 8/133 (6%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           YYG G+V  +L     A  +F K +++  +  +  K L   ++++G  +   +   KA +
Sbjct: 63  YYGRGKVYFELERLEDAAADFRKAIDVKSNYIDAHKKLAETFMKIGAPDDEFQKRFKAIQ 122

Query: 360 IDPRDAQAFIDLGELL--ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 417
            DP +A  ++DLG     +  D   A++ +K A  L           +L N+GV + + G
Sbjct: 123 NDPDNAMGYVDLGVFYHKLEKDID-AIEQYKQALELDPNNS-----FILYNLGVGYLDMG 176

Query: 418 EFESAHQSFKDAL 430
            +E A   FK A+
Sbjct: 177 LYEDAETIFKQAI 189



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 105/277 (37%), Gaps = 54/277 (19%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
           LGV+Y            K E  I A + Y +A  +D +        G   L  G  E A 
Sbjct: 134 LGVFY-----------HKLEKDIDAIEQYKQALELDPNNSFILYNLGVGYLDMGLYEDAE 182

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           + FK  +E +  +  A    A     RG+  + ++   + L+V+P    +  +  GL + 
Sbjct: 183 TIFKQAIEINPTHDNAHYNLAVALHKRGKIDECIKELNKTLEVNPKYSNSYVI-FGLIKL 241

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           +  +  +A   + +A+++DP+N+EA                      + QRA        
Sbjct: 242 REKKFDEAIAQYNKAMEIDPDNLEA----------------------RYQRA-------- 271

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
                      F  Q    + L E  + +    P  + + YN+   YH     +KA  +Y
Sbjct: 272 ---------IVFALQERYDDALAEN-MKILEKNPKHASAAYNIGVIYHRTDRLDKAMEWY 321

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 320
               K+I+  +E    YY  GQ+    GD   A +++
Sbjct: 322 DKVAKKIDPLYE--DAYYTRGQLYSMKGDHSKAYSDY 356


>gi|282900764|ref|ZP_06308705.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194348|gb|EFA69304.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 1024

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 79/364 (21%), Positives = 157/364 (43%), Gaps = 24/364 (6%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           YN+A +I+ +    +  +G      G+ + A   +   ++ + +   A   +       G
Sbjct: 283 YNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRGIARSELG 342

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
               ++  Y +A+Q++P+   A     G+ R +LG    A   + +A+Q++P N +A   
Sbjct: 343 DKQGAIVDYNQAIQINPNDADAYN-NRGIARSELGDKQGAIVDYNQAIQINPNNADAYNN 401

Query: 192 LAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTET 248
             +    A    G ++G +    +A +I P  A A N   LA       Q  +V+     
Sbjct: 402 RGI----ARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVD--YNQ 455

Query: 249 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 308
           A+ +    P  +++YYN   +    GD + A + Y  ++ +IN    +   Y G G  + 
Sbjct: 456 AIQIN---PNNAYAYYNRGLARSELGDKQGAIVDYNQAI-QINP--NYADAYIGRGNARS 509

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
           +LGD + A+ ++ + ++I P+  +     G+   +LG  + A     +A +I+P DA A+
Sbjct: 510 ELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAY 569

Query: 369 IDLG--ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 426
            + G     +    GA +D  +  +     A      +  NN G+   E G+ + A   +
Sbjct: 570 YNRGLARSELGDKQGAIVDYNQAIQINPNNA------DAYNNRGIARSELGDKQGAIVDY 623

Query: 427 KDAL 430
             A+
Sbjct: 624 NQAI 627



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 31/272 (11%)

Query: 140  YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDL 197
            Y +A+Q++P+   +     G+ R +LG    A   + +A+Q++P + +A     LA  +L
Sbjct: 759  YTQAIQINPNYADSY-YNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSEL 817

Query: 198  QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG- 256
               + A     +    +A +I P  A       + ++  G      +L +   A+ ++  
Sbjct: 818  GDKQGA-----IVDYNQAIQINPNNA-------DSYYNRG--IARSELGDKQGAIVDYNQ 863

Query: 257  -----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
                 P  + SYYN   +    GD + A + Y  ++ +IN    +   Y G G  + +LG
Sbjct: 864  AIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAI-QINP--NYADAYIGRGNARSELG 920

Query: 312  DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
            D + A+ ++ + ++I P+  +     G    +LG  + A     +A +I+P DA A+ + 
Sbjct: 921  DKQGAIVDYNQAIQINPNYADAYNNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNR 980

Query: 372  GELLISSDTG---AALDAFKTARTLLKKAGEE 400
            G  L  S+ G    A   F+TA  L ++ G++
Sbjct: 981  G--LARSELGDKQGARGDFQTAARLYQQQGKQ 1010



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 80/374 (21%), Positives = 159/374 (42%), Gaps = 50/374 (13%)

Query: 7   KQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 66
           KQG +  + Q ++      I+  YAD  Y R       G+  + LG       +K+   +
Sbjct: 310 KQGAIVDYNQAIQ------INPNYADAYYNR-------GIARSELG-------DKQGAIV 349

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
                YN+A +I+ ++   +  +G      G+ + A   +   ++ + +N  A   +   
Sbjct: 350 D----YNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIA 405

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
               G    ++  Y +A+Q++P+   A     GL R +LG    A   + +A+Q++P N 
Sbjct: 406 RSELGDKQGAIVDYNQAIQINPNYAYAYN-NRGLARSELGDKQGAIVDYNQAIQINPNNA 464

Query: 187 EALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
            A     LA  +L   + A     +    +A +I P  A A         + G+     +
Sbjct: 465 YAYYNRGLARSELGDKQGA-----IVDYNQAIQINPNYADA---------YIGRGNARSE 510

Query: 245 LTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
           L +   A+ ++       P  + +Y     +    GD + A + Y  ++ +IN P++   
Sbjct: 511 LGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAI-QIN-PND-AD 567

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            YY  G  + +LGD + A+ ++ + ++I P+N +     G    +LG  + A     +A 
Sbjct: 568 AYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAI 627

Query: 359 KIDPRDAQAFIDLG 372
           +I+P  A ++ + G
Sbjct: 628 QINPNYADSYYNRG 641



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 69/323 (21%), Positives = 138/323 (42%), Gaps = 18/323 (5%)

Query: 54  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 113
           +E      EE+ I    Y  K+S +  +    +  +   L   G+ + A   +   ++ +
Sbjct: 199 VEGGGTTPEEYGIPINAY--KSSSVYSNNAEFYFNRAYKLYESGDKQGAIVDYTQAIQIN 256

Query: 114 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
            +   A +G+     + G    ++  Y +A+Q++P+   A     G  R +LG    A  
Sbjct: 257 PNYALAYIGRGNARSDLGDKQGAIVDYNQAIQINPNYALAY-YNRGNARSELGDKQGAIV 315

Query: 174 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNY--LA 230
            + +A+Q++P   +A     +    A    G ++G +    +A +I P  A A N   +A
Sbjct: 316 DYNQAIQINPNYADAYYNRGI----ARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIA 371

Query: 231 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
                  Q  +V+     A+ +    P  + +Y N   +    GD + A + Y  ++ +I
Sbjct: 372 RSELGDKQGAIVD--YNQAIQIN---PNNADAYNNRGIARSELGDKQGAIVDYNQAI-QI 425

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
           N  + + +   GL   + +LGD + A+ ++ + ++I P+N       G    +LG  + A
Sbjct: 426 NPNYAYAYNNRGL--ARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGA 483

Query: 351 QELLRKAAKIDPRDAQAFIDLGE 373
                +A +I+P  A A+I  G 
Sbjct: 484 IVDYNQAIQINPNYADAYIGRGN 506


>gi|440752492|ref|ZP_20931695.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
 gi|440176985|gb|ELP56258.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
          Length = 801

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 130/318 (40%), Gaps = 22/318 (6%)

Query: 117 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 176
           +P+L G     +   RY D+L+ + R + + P          G   Y L Q  +A  ++ 
Sbjct: 438 LPSLAGFTLKLYELKRYQDALKGFNRLVSLLPQWEDGW-FYQGTTFYYLEQYQEAIASYD 496

Query: 177 RALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           +AL++ P+  EA      A+ DL   E A     +    RA E+ P    A N   N  F
Sbjct: 497 KALEIKPDYHEAWNNRGNALDDLGRFEQA-----IASYDRALEMKPDYHEAWNNRGNALF 551

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
             G+  L E +     A+    P    ++YN   +  + G +E+A   Y  +++     H
Sbjct: 552 NLGR--LAEAIASYDKALE-FKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPDYH 608

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           +    +Y  G     LG F   + ++++ LEI PD  E     G     LG++E+A    
Sbjct: 609 Q---AWYNRGNALGNLGRFEEEIASYDRALEIKPDKHEAWNNRGVALGNLGRLEEAIASY 665

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVI 412
            +A +  P D +A+ + G  L +      L     A     KA E  P   E   N G  
Sbjct: 666 DRALEFKPDDHEAWYNRGNALFN------LGRLAEAIASYDKALEFKPDYHEAWYNRGNA 719

Query: 413 HFEKGEFESAHQSFKDAL 430
            F  G FE A  S+  AL
Sbjct: 720 LFNLGRFEEAIASYDRAL 737



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 20/304 (6%)

Query: 63  EHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 120
           E +  A   Y+KA  I  D HE   W  +G  L   G  EQA +++   LE   D   A 
Sbjct: 486 EQYQEAIASYDKALEIKPDYHE--AWNNRGNALDDLGRFEQAIASYDRALEMKPDYHEAW 543

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
             +    FN GR ++++  Y +AL+  P    A     G   + LG+  +A  ++ RAL+
Sbjct: 544 NNRGNALFNLGRLAEAIASYDKALEFKPDYHEAW-YNRGNALFNLGRFEEAIASYDRALE 602

Query: 181 LDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTG 237
             P+  +A         + N    + +  E++    RA EI P    A N   N     G
Sbjct: 603 FKPDYHQAWYN------RGNALGNLGRFEEEIASYDRALEIKPDKHEAWN---NRGVALG 653

Query: 238 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 297
               +E+   +        P    ++YN   +  + G   +A   Y  +++     HE  
Sbjct: 654 NLGRLEEAIASYDRALEFKPDDHEAWYNRGNALFNLGRLAEAIASYDKALEFKPDYHE-- 711

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             +Y  G     LG F  A+ ++++ LE   +           Y     +E A E L++A
Sbjct: 712 -AWYNRGNALFNLGRFEEAIASYDRALEFNSNYANAYYNKACCYGLQNNVELAIENLQRA 770

Query: 358 AKID 361
             +D
Sbjct: 771 INLD 774



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 147/398 (36%), Gaps = 43/398 (10%)

Query: 172 RQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN 231
           +Q   +  +  PE  E L +LA   L+  E    +  ++   R   + P       Y   
Sbjct: 423 KQLIWQLFKQKPE--EMLPSLAGFTLKLYELKRYQDALKGFNRLVSLLPQWEDGWFYQGT 480

Query: 232 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
            F++  Q+       + AL +    P    ++ N   +    G +E+A   Y  +++   
Sbjct: 481 TFYYLEQYQEAIASYDKALEIK---PDYHEAWNNRGNALDDLGRFEQAIASYDRALEMKP 537

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
             HE    +   G     LG    A+ +++K LE  PD  E     G+    LG+ E+A 
Sbjct: 538 DYHE---AWNNRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAI 594

Query: 352 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNI 409
               +A +  P   QA+ + G  L        L  F+       +A E  P   E  NN 
Sbjct: 595 ASYDRALEFKPDYHQAWYNRGNAL------GNLGRFEEEIASYDRALEIKPDKHEAWNNR 648

Query: 410 GVIHFEKGEFESAHQSFKDAL-----GDGIWLT----LLDSKTKTYVIDASASMLQFKDM 460
           GV     G  E A  S+  AL         W      L +       I +    L+FK  
Sbjct: 649 GVALGNLGRLEEAIASYDRALEFKPDDHEAWYNRGNALFNLGRLAEAIASYDKALEFKP- 707

Query: 461 QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL 520
                     ++ E  +N+   LFNL R  E I         Y   L    +Y +AY   
Sbjct: 708 ----------DYHEAWYNRGNALFNLGRFEEAIAS-------YDRALEFNSNYANAYYNK 750

Query: 521 AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE 558
           A     +NN++L+IE +  A+ ++ KY +      D E
Sbjct: 751 ACCYGLQNNVELAIENLQRAINLDVKYQDMAKTDKDFE 788


>gi|398824468|ref|ZP_10582798.1| Flp pilus assembly protein TadD [Bradyrhizobium sp. YR681]
 gi|398224875|gb|EJN11167.1| Flp pilus assembly protein TadD [Bradyrhizobium sp. YR681]
          Length = 661

 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 148/343 (43%), Gaps = 32/343 (9%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G + QA + ++ +L ++ D+  ++       F  G+   +L+F  RA+++ P C G    
Sbjct: 22  GRLPQAEAIYRQILASEPDHADSIHLLGVASFQAGQPDKALDFIIRAIKLRP-CTGVYYS 80

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +      LG+  +A  +++ AL   P+N++A   L ++  ++ +AA    G E   R  
Sbjct: 81  NMAAVLRALGRRDEAVASYREALLHQPDNLDAHNQLGILLGESGDAA----GEEAHYR-- 134

Query: 217 EIYPYCAMALNYLANHF---FFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARS 269
                  +AL Y  +H    F      +  +  + A+     V    P  + ++ NL   
Sbjct: 135 -------LALRYDPDHVDARFNLANLLVRRKHLDDAIGDFRQVLRRKPDFAAAHSNLGAV 187

Query: 270 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 329
                 +E+    Y  +V+ +N    F   Y  LG +  KLG F  A     +  ++   
Sbjct: 188 LFDLSAFEECERCYREAVR-LNP--AFAEAYNNLGILLTKLGRFDEAEAGLREACKLKSC 244

Query: 330 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 389
             E L  LG +    G+ E+++   R+A ++ P    A ++LG  L  S        F  
Sbjct: 245 FPEALNNLGDLLRIRGRPEESEVCCREALRLKPDYVSAQLNLGNALRESGR------FHE 298

Query: 390 ARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 430
           A    ++A +  P   E L+N+G + F+ G  + A QSF+ A+
Sbjct: 299 AEACYREALDRNPAWPEALSNLGSLLFDLGRPDEAIQSFRTAV 341



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 120/282 (42%), Gaps = 17/282 (6%)

Query: 151 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 210
           PG      GL  ++ G+L +A   +++ L  +P++ +++  L V   QA +     K ++
Sbjct: 7   PGFASFEAGLAHHRAGRLPQAEAIYRQILASEPDHADSIHLLGVASFQAGQP---DKALD 63

Query: 211 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 270
            + RA ++ P   +  + +A      G+    ++   +      H P    ++  L    
Sbjct: 64  FIIRAIKLRPCTGVYYSNMAAVLRALGRR---DEAVASYREALLHQPDNLDAHNQLGILL 120

Query: 271 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 330
              GD      +Y  +++  +  H  +   + L  + ++      A+ +F +VL   PD 
Sbjct: 121 GESGDAAGEEAHYRLALR-YDPDH--VDARFNLANLLVRRKHLDDAIGDFRQVLRRKPDF 177

Query: 331 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 390
                 LG +   L   E+ +   R+A +++P  A+A+ +LG LL        L  F  A
Sbjct: 178 AAAHSNLGAVLFDLSAFEECERCYREAVRLNPAFAEAYNNLGILLTK------LGRFDEA 231

Query: 391 RTLLKKAG--EEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
              L++A   +    E LNN+G +   +G  E +    ++AL
Sbjct: 232 EAGLREACKLKSCFPEALNNLGDLLRIRGRPEESEVCCREAL 273



 Score = 40.0 bits (92), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 12/160 (7%)

Query: 42  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 101
           N LG+  T LG+ +  +    E   L + +           P      G LL  +G  E+
Sbjct: 216 NNLGILLTKLGRFDEAEAGLREACKLKSCF-----------PEALNNLGDLLRIRGRPEE 264

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           +    +  L    D V A L         GR+ ++   Y+ AL  +P+ P A+   +G  
Sbjct: 265 SEVCCREALRLKPDYVSAQLNLGNALRESGRFHEAEACYREALDRNPAWPEALS-NLGSL 323

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 201
            + LG+  +A Q+F+ A+   P+  +A   LA+  L A +
Sbjct: 324 LFDLGRPDEAIQSFRTAVSQKPDYPDAHSNLAITLLLAGQ 363


>gi|75909502|ref|YP_323798.1| hypothetical protein Ava_3295 [Anabaena variabilis ATCC 29413]
 gi|75703227|gb|ABA22903.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 311

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 110/294 (37%), Gaps = 47/294 (15%)

Query: 107 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 166
           K++ +      P LL Q       GR  D++  ++ A+Q+ P+   A    +GL   + G
Sbjct: 35  KLLAQYSLPTAPTLLNQGLQAIQAGRIQDAIAAFQSAIQLDPNL-AAAHYNLGLALRQTG 93

Query: 167 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 226
           QL  A  AF RA Q DP    A   L    L+ N    +++  + +QRA E+ P    A 
Sbjct: 94  QLQPAADAFYRATQSDPNFALAFANLGGSLLEGNN---LQQANDYLQRALELEPRLGFA- 149

Query: 227 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 286
                                               +YNL      + ++E A   +  +
Sbjct: 150 ------------------------------------HYNLGLVRQQQQNWEGAIASFQKA 173

Query: 287 VK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
           V+   N P     P+Y LG   L+LG    A   F + ++I P   E    LG I    G
Sbjct: 174 VELSKNAPE----PHYYLGLCYLQLGKLDEAKNAFNQAIKINPRYSEAHYNLGVILFNQG 229

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAG 398
             ++A    R +A+ +P    A+   G +    +    A   F  AR L    G
Sbjct: 230 NSQEALIAFRNSAEANPNYPNAYYGAGLVFTQLNQYSEAAKVFNHARNLYNTQG 283


>gi|118391306|ref|XP_001028412.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89281566|gb|EAR80749.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 318

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 71/301 (23%), Positives = 137/301 (45%), Gaps = 36/301 (11%)

Query: 133 YSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           Y D++ F+++A+Q+ P    A   LG    + K+     A    Q+A+QLDP++  A   
Sbjct: 36  YDDAITFFQKAVQLDPRDSWAFGNLGYSFMKKKM--YDDAITFLQKAVQLDPKDSWAFGN 93

Query: 192 LAVMDLQANEAAGIRK----GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           L    +       I+K     +   Q+A ++ P  + A       F   G  F+ +++ +
Sbjct: 94  LGYSFM-------IKKMYDDAITFFQKAVQLDPKDSCA-------FRCMGYSFMKKEMYD 139

Query: 248 TALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
            A+          P  S ++ NL  S+  K  Y+ A  ++  +V +++    + F   G 
Sbjct: 140 DAITFFQKAVQLDPRDSWAFGNLGYSFMKKKMYDDAITFFQKAV-QLDPKDSWAFGNLGY 198

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
             ++ K+ D   A+T F+K +++ P +      LG+ ++Q    + A    +KA ++DP+
Sbjct: 199 SFMKKKMYD--DAITFFQKAVQLDPKDSWAFGKLGYSFMQKQMYDDAITFFQKAVQLDPK 256

Query: 364 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFES 421
           D+ AF  LG   +  +       +  A T  +KA +  P   E L N+G+   +KG ++ 
Sbjct: 257 DSWAFGKLGYSFMQKEM------YDDAITFSQKAVQLDPDVKENLLNLGIAFQKKGRYQH 310

Query: 422 A 422
           +
Sbjct: 311 S 311



 Score = 50.8 bits (120), Expect = 0.004,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 115/262 (43%), Gaps = 25/262 (9%)

Query: 175 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           FQ+A+QLDP++  A   L    +Q          +   Q+A ++ P  + A   L     
Sbjct: 9   FQKAVQLDPKDSWAFGNLGYSFMQKEM---YDDAITFFQKAVQLDPRDSWAFGNL----- 60

Query: 235 FTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 290
             G  F+ +++ + A+          P  S ++ NL  S+  K  Y+ A  ++  +V ++
Sbjct: 61  --GYSFMKKKMYDDAITFLQKAVQLDPKDSWAFGNLGYSFMIKKMYDDAITFFQKAV-QL 117

Query: 291 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 350
           +      F   G   ++ ++ D   A+T F+K +++ P +      LG+ +++    + A
Sbjct: 118 DPKDSCAFRCMGYSFMKKEMYD--DAITFFQKAVQLDPRDSWAFGNLGYSFMKKKMYDDA 175

Query: 351 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNN 408
               +KA ++DP+D+ AF +LG   +          +  A T  +KA +  P +      
Sbjct: 176 ITFFQKAVQLDPKDSWAFGNLGYSFMKKKM------YDDAITFFQKAVQLDPKDSWAFGK 229

Query: 409 IGVIHFEKGEFESAHQSFKDAL 430
           +G    +K  ++ A   F+ A+
Sbjct: 230 LGYSFMQKQMYDDAITFFQKAV 251



 Score = 41.6 bits (96), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 313 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           +  A+T F+K +++ P +      LG+ ++Q    + A    +KA ++DPRD+ AF +LG
Sbjct: 2   YDDAITFFQKAVQLDPKDSWAFGNLGYSFMQKEMYDDAITFFQKAVQLDPRDSWAFGNLG 61

Query: 373 ELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 430
              +          +  A T L+KA +  P +     N+G     K  ++ A   F+ A+
Sbjct: 62  YSFMKKKM------YDDAITFLQKAVQLDPKDSWAFGNLGYSFMIKKMYDDAITFFQKAV 115


>gi|189235894|ref|XP_967579.2| PREDICTED: similar to AGAP006254-PA [Tribolium castaneum]
          Length = 1086

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 160/386 (41%), Gaps = 24/386 (6%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           Y+ LG +  ++ + +E    A   Y  A R+       ++     L+A G++EQA  A+ 
Sbjct: 143 YSNLGNVYKERSQLQE----ALDNYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYI 198

Query: 108 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
             L+ + D   V + LG        GR  ++   Y +A++  P    A    +G      
Sbjct: 199 TALQYNPDLYCVRSDLGNLLKAL--GRLDEAKACYLKAIETRPDFAVAWS-NLGCVFNAQ 255

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 256 GEIWLAIHHFEKAVGLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNAVV 312

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
              LA  ++  G   L++   +T        P    +Y NLA +   KG   +A   Y  
Sbjct: 313 HGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNT 369

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
           +++      + +     L  ++ + G    A   + K LE++P+       L  +  Q G
Sbjct: 370 ALRLCPSHADSL---NNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQG 426

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 404
           ++ +A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 427 KLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQINPAFA-----D 481

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDAL 430
             +N+  IH + G    A QS++ AL
Sbjct: 482 AHSNLASIHKDSGNIPEAIQSYRTAL 507



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 134/332 (40%), Gaps = 48/332 (14%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 241 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVGLDPNFLDAYINLGNVLKEARIFDRAV 296

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    +     
Sbjct: 297 AAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDA-YCNLANALK 355

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + GQ+ +A + +  AL+L P + ++L  LA +     E   I +      +A E++P  A
Sbjct: 356 EKGQVAEAEECYNTALRLCPSHADSLNNLANIK---REQGYIEEATRLYLKALEVFPEFA 412

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A                                   HS  NLA     +G   +A ++Y
Sbjct: 413 AA-----------------------------------HS--NLASVLQQQGKLNEALMHY 435

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++   +P  F   Y  +G    ++ D   AL  + + ++I P   +    L  I+  
Sbjct: 436 KEAIRI--QP-TFADAYSNMGNTLKEMQDVSGALQCYTRAIQINPAFADAHSNLASIHKD 492

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            G I +A +  R A K+ P    A+ +L   L
Sbjct: 493 SGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 524



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 100/470 (21%), Positives = 187/470 (39%), Gaps = 27/470 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   D+ N   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 86  GDYENAERHCMQLWRQDQTNTGVLLLLSSIHFQCRRLDKSAHFSTLAIKQNPLLAEAYS- 144

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    +  QL +A   ++ A++L P+ ++  + LA   + A +   + + ++    A 
Sbjct: 145 NLGNVYKERSQLQEALDNYRHAVRLKPDFIDGYINLAAALVAAGD---MEQAVQAYITAL 201

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +++     L      P  + ++ NL   ++++G
Sbjct: 202 QYNPDLYCVRS--DLGNLLKALGR---LDEAKACYLKAIETRPDFAVAWSNLGCVFNAQG 256

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P+N    
Sbjct: 257 EIWLAIHHFE---KAVGLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVH 313

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 394
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G   +A +   T L
Sbjct: 314 GNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANAL--KEKGQVAEAEECYNTAL 371

Query: 395 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 454
           +        + LNN+  I  E+G  E A + +  AL          S          AS+
Sbjct: 372 RLCPSHA--DSLNNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNL--------ASV 421

Query: 455 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 514
           LQ +  +L     +    + +         N+   L+++ D   A   Y   +     + 
Sbjct: 422 LQ-QQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQINPAFA 480

Query: 515 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
           DA+  LA+I K   N+  +I+    ALK+   +P+A   L        DW
Sbjct: 481 DAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDW 530


>gi|411119538|ref|ZP_11391918.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410711401|gb|EKQ68908.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 2384

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 139/319 (43%), Gaps = 56/319 (17%)

Query: 48  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 107
           YT LG    +Q   EE    A   Y +   +  +    +   G  L  +G++E+A + F+
Sbjct: 210 YTSLGSTLQQQGNGEE----AIACYQQVVTLKPNYAEGFNNLGLALQHQGKLEEAIATFQ 265

Query: 108 IVLEADRDNVPAL---LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRY 163
             L A + N P +   LG   +E NR    +++  Y++A+  HP+ P A+  LG  L R 
Sbjct: 266 QAL-ALQPNFPGVCNNLGNLLLEVNR--VDEAIASYQQAIAQHPNYPEALNNLGNALQRQ 322

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
             G+L +A   +Q+AL+L P  VEAL  L            + K   K++          
Sbjct: 323 --GKLDEAITHYQKALELRPNFVEALSNLG----------AVLKDQHKLE---------- 360

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A++YL                 E A+++   GP+ +  + NL  +Y  +   ++A   Y
Sbjct: 361 AAVSYL-----------------EQAVSL---GPSYAEIHNNLGNAYQEQKRVDEAIACY 400

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +V    KP E    +  LG +   +G+F  A  +F K +EI PD       LG  +  
Sbjct: 401 RTAVAL--KP-EMAEVHSNLGNMLQYIGEFEEAFEHFRKAIEIQPDFAGVYNNLGIAHRN 457

Query: 344 LGQIEKAQELLRKAAKIDP 362
            GQ+++A     KA ++ P
Sbjct: 458 AGQVQEAFAAYSKALELKP 476



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 166/398 (41%), Gaps = 22/398 (5%)

Query: 35  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 94
           +ER+  L      +  +G +   Q +  E    A ++Y +A  +  ++P      G  L 
Sbjct: 61  FERVLSLQPGAEAHNSMGIVLRAQGKYTE----AVEHYQQALALKPNQPEVLSNLGNALK 116

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
             G++E+A +A++  L  ++    A         ++G+  ++L  Y+ A+++ P+   A 
Sbjct: 117 ELGKLEEAIAAYQQALNLNQAYAEAHNNLGIAYKDQGKLDEALACYREAIRLKPNYAEA- 175

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL-AVMDLQANEAAGIRKGMEKMQ 213
              +G+   +  +L  A   F++A+ L P  ++A  +L + +  Q N      + +   Q
Sbjct: 176 HHNMGIVLRQQNKLDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGNG----EEAIACYQ 231

Query: 214 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 273
           +   + P  A   N L       G+        + ALA+  + P   ++  NL    +  
Sbjct: 232 QVVTLKPNYAEGFNNLGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRV 291

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
              E    Y  A  +  N P         LG    + G    A+T+++K LE+ P+  E 
Sbjct: 292 D--EAIASYQQAIAQHPNYPEAL----NNLGNALQRQGKLDEAITHYQKALELRPNFVEA 345

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTART 392
           L  LG +     ++E A   L +A  + P  A+   +LG           A+  ++TA  
Sbjct: 346 LSNLGAVLKDQHKLEAAVSYLEQAVSLGPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVA 405

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           L  +       EV +N+G +    GEFE A + F+ A+
Sbjct: 406 LKPEMA-----EVHSNLGNMLQYIGEFEEAFEHFRKAI 438



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 144/335 (42%), Gaps = 17/335 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G V +A   +K++L  D  +V AL     + +   R+ ++ E+++R L + P       +
Sbjct: 18  GRVAEAEQVYKLLLREDPHSVDALNLLGALVYEDKRFEEAQEYFERVLSLQPGAEAHNSM 77

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
           GI L     G+  +A + +Q+AL L P   E L  L        E   + + +   Q+A 
Sbjct: 78  GIVL--RAQGKYTEAVEHYQQALALKPNQPEVLSNLGNA---LKELGKLEEAIAAYQQAL 132

Query: 217 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 276
            +    A A N L     +  Q  L E L     A+    P  + +++N+      +   
Sbjct: 133 NLNQAYAEAHNNLG--IAYKDQGKLDEALACYREAI-RLKPNYAEAHHNMGIVLRQQNKL 189

Query: 277 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 336
           + A  Y+  ++    KPH +I  Y  LG    + G+   A+  +++V+ + P+  E    
Sbjct: 190 DDAIHYFRQAIAL--KPH-YIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNN 246

Query: 337 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTLLK 395
           LG      G++E+A    ++A  + P       +LG LL+  +    A+ +++ A     
Sbjct: 247 LGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQA----- 301

Query: 396 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            A      E LNN+G     +G+ + A   ++ AL
Sbjct: 302 IAQHPNYPEALNNLGNALQRQGKLDEAITHYQKAL 336



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 257  PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFR 314
            P    +Y NL  +Y++KG++  A   Y  +++   KPH   FP     LG    +LG+F 
Sbjct: 1007 PDYPDAYNNLGLAYYAKGNFASAAEAYRQAIER--KPH---FPQALNHLGNALKELGNFA 1061

Query: 315  SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
             A   +++ + + PD  +     G+I+   G ++ A +   +A +IDP  A+A
Sbjct: 1062 EAARYYQQAIALKPDYAKAYNNWGNIFRDEGDLQTAVQYYDQATEIDPNFAEA 1114


>gi|397690319|ref|YP_006527573.1| TPR repeat-containing protein [Melioribacter roseus P3M]
 gi|395811811|gb|AFN74560.1| TPR repeat-containing protein [Melioribacter roseus P3M]
          Length = 470

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 22/304 (7%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G  E+A  + +  L  +  N   L     +   + +Y++++E+++ A++  P    A   
Sbjct: 120 GMFEEAVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEA-WY 178

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G C   +G+L  A  A++  L  DPEN        ++ L+  E        EK   AF
Sbjct: 179 ELGYCYESMGELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEE-------FEKAINAF 231

Query: 217 EIYPYCAMAL-NYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYH 271
           E+    ++AL +  ++ +F  G  +      + A+          P     YYNL ++Y 
Sbjct: 232 EL----SIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQTYE 287

Query: 272 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 331
             G    A   Y  +   IN   ++   Y   G      G F+ AL +F K + I  +  
Sbjct: 288 EMGSIANAIKCYTEA---INLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPV 344

Query: 332 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 391
           +   A   +   LG++ ++ E  + A +IDP +   ++ L E     + G  L++ K  +
Sbjct: 345 DAWYAKADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFF--EVGNWLESLKAYK 402

Query: 392 TLLK 395
             ++
Sbjct: 403 ECIR 406



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 90/427 (21%), Positives = 175/427 (40%), Gaps = 28/427 (6%)

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           Q C++++     D L      LQ+ P          G+    + +  +A   F++AL L+
Sbjct: 46  QLCIDYDLVE--DGLYLTNALLQITPYNYEIWHFK-GIFLNNMFRFAEAYNCFRKALSLN 102

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P +V+  + +A+ +   +      + +E +++A  I P+    L  L     +  +    
Sbjct: 103 PNDVDTHINIAIAE---DNLGMFEEAVESLEKALAIEPHNEEILYNLGA--LYEKKEKYN 157

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
           E +    +AV    P    ++Y L   Y S G+ + A     A    +N   E    +Y 
Sbjct: 158 EAVEYFRMAVE-KAPDYLEAWYELGYCYESMGELKDA---LAAYEMYLNGDPENYAGWYN 213

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            G V L+L +F  A+  FE  + +  D   +    G+ Y + G+ ++A    +KA KIDP
Sbjct: 214 KGIVHLRLEEFEKAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKIDP 273

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
            D   + +LG+     + G+  +A K     +    +    E     G  +   G+F+ A
Sbjct: 274 DDETIYYNLGQ--TYEEMGSIANAIKCYTEAINLDPDYY--EAYLARGNCYDASGKFQLA 329

Query: 423 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 482
            + F  A      +T+       +   A    L++   +L    E+  N VE+  +    
Sbjct: 330 LRDFNKA------ITIASEPVDAWYAKAD---LEYSLGKLNESIESYKNAVEIDPDNFNG 380

Query: 483 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 542
              LA    ++ + + +   Y+  +   ++Y  AY  +A I    ++ Q  IE + +A +
Sbjct: 381 WLKLAEAFFEVGNWLESLKAYKECIRIDKNYARAYYSIAKINFLLSHTQEGIEYLKKAFE 440

Query: 543 VNGKYPN 549
           ++   PN
Sbjct: 441 LD---PN 444



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 19/289 (6%)

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           LG F  A+ + EK L I P N E L  LG +Y +  +  +A E  R A +  P   +A+ 
Sbjct: 119 LGMFEEAVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEAWY 178

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           +LG    S   G   DA       L   G+        N G++H    EFE A  +F+  
Sbjct: 179 ELGYCYES--MGELKDALAAYEMYLN--GDPENYAGWYNKGIVHLRLEEFEKAINAFE-- 232

Query: 430 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL 489
               + + L D  + ++     A     K  Q    ++     +++  +  T+ +NL + 
Sbjct: 233 ----LSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKK---ALKIDPDDETIYYNLGQT 285

Query: 490 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 549
            E++     A   Y   +    DY +AYL       A    QL++   N+A+ +  +  +
Sbjct: 286 YEEMGSIANAIKCYTEAINLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVD 345

Query: 550 ALSMLGDLELKNDDWVKAKETFRAA----SDATDG--KDSYATLSLGNW 592
           A     DLE       ++ E+++ A     D  +G  K + A   +GNW
Sbjct: 346 AWYAKADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFFEVGNW 394



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           W  KG + L   E E+A +AF++ +    D   +        +  G+Y  ++  YK+AL+
Sbjct: 211 WYNKGIVHLRLEEFEKAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALK 270

Query: 146 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           + P     I   +G    ++G +  A + +  A+ LDP+  EA +A
Sbjct: 271 IDPD-DETIYYNLGQTYEEMGSIANAIKCYTEAINLDPDYYEAYLA 315



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 60/335 (17%), Positives = 129/335 (38%), Gaps = 45/335 (13%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           EK+E +  A +Y+  A          W   G    + GE++ A +A+++ L  D +N   
Sbjct: 151 EKKEKYNEAVEYFRMAVEKAPDYLEAWYELGYCYESMGELKDALAAYEMYLNGDPENYAG 210

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
              +  V      +  ++  ++ ++ +      +     G   YK G+  +A  A+++AL
Sbjct: 211 WYNKGIVHLRLEEFEKAINAFELSIALKDDFSSS-WFNCGYAYYKTGKYKQAMTAYKKAL 269

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           ++DP++      L     Q  E  G       +  A + Y                    
Sbjct: 270 KIDPDDETIYYNLG----QTYEEMG------SIANAIKCY-------------------- 299

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 299
                 TE      N  P    +Y      Y + G ++ A   +  ++   ++P   +  
Sbjct: 300 ------TEA----INLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEP---VDA 346

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           +Y    ++  LG    ++ +++  +EI PDN      L   + ++G   ++ +  ++  +
Sbjct: 347 WYAKADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIR 406

Query: 360 IDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTL 393
           ID   A+A+  + ++  + S T   ++  K A  L
Sbjct: 407 IDKNYARAYYSIAKINFLLSHTQEGIEYLKKAFEL 441



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 124
           F LA + +NKA  I       W  K  L  + G++ ++  ++K  +E D DN    L  A
Sbjct: 326 FQLALRDFNKAITIASEPVDAWYAKADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLA 385

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
              F  G + +SL+ YK  +++  +   A    I    + L    +  +  ++A +LDP
Sbjct: 386 EAFFEVGNWLESLKAYKECIRIDKNYARA-YYSIAKINFLLSHTQEGIEYLKKAFELDP 443


>gi|326431070|gb|EGD76640.1| tetratricopeptide protein, variant [Salpingoeca sp. ATCC 50818]
          Length = 753

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 143/367 (38%), Gaps = 53/367 (14%)

Query: 116 NVPALLGQ-ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLG 166
           NV AL        +++G+Y  ++ FY++AL +        HPS        +G   +  G
Sbjct: 212 NVAALYNNLGIANYSKGKYEKAIAFYEKALAITVEVLGEKHPSTADTYN-SLGAAYHSKG 270

Query: 167 QLGKARQAFQRALQL--------DPENVEALVALAVMDLQANE----------AAGIRKG 208
           +  KA Q ++ AL +         P   +    L  +     +          A  IR  
Sbjct: 271 EYAKAIQQYENALAIRLETLGEKHPNTADTYNNLGSVYSSEGQYDKAIHFHEKALAIRVE 330

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
               + +     Y  + L Y     +    HF  + L  TA  +    P+ + +Y NL  
Sbjct: 331 TLGEKHSRTASAYLGLGLAYQRKGDYDKAIHFHEKDLAITAEVLGEKHPSTADTYNNLGI 390

Query: 269 SYHSKGDYEKAGLYYMAS----VKEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKV 323
           +Y SKG+Y KA  YY  +    VK + + H      Y  LG      GD+  A+  + K 
Sbjct: 391 AYRSKGEYGKAIDYYEKALAIRVKALGEKHPSTADTYNNLGSAYDDKGDYDKAIALYAKA 450

Query: 324 LEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQA 367
           L I        +P    +   LG      G  +KA     KA  I         P  A  
Sbjct: 451 LAIRVETLGQKHPSTANSYLGLGIANYSKGDYDKAIAFYEKALAITVVVLGEKHPSTATT 510

Query: 368 FIDLGELLIS-SDTGAALDAFKTARTL-LKKAGEEVP--IEVLNNIGVIHFEKGEFESAH 423
           + +LGE   S  +   A++ ++ A  + ++  G + P   +  NNIG++H ++G+ E A 
Sbjct: 511 YNNLGEAYHSKGEYEKAIELYEKALAITVETLGVKHPDTADTCNNIGLLHNDRGDKEQAC 570

Query: 424 QSFKDAL 430
              + AL
Sbjct: 571 SYMQQAL 577


>gi|440294379|gb|ELP87396.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba invadens
           IP1]
          Length = 915

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 26/269 (9%)

Query: 87  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 146
           + KG L +  G+++ A   F  +L+A  + +   LG+       G    +L  + +A+++
Sbjct: 251 IAKGYLYVNTGKMQDAIKHFDQLLKAHPELIAGYLGRGSARAMSGDLKRALTDFDKAVKI 310

Query: 147 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA-------LVALAVMDLQA 199
           +  C  A +   G  +  LG +  A   F +A++L PE  ++         +L V D   
Sbjct: 311 NAKCADAYKRR-GQVKAALGNVNGALDDFTQAIKLSPEEADSYRQRGSLFHSLGVFD--- 366

Query: 200 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 259
                  K  + ++++ +  P  A  +N LA    F G   + E +     A+ N     
Sbjct: 367 -------KASDDLKKSLKYAPGDAQVINELA--LCFNGMGLVDEAINAYTRAI-NAKENY 416

Query: 260 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 319
           +  Y +L + Y   G Y ++      ++K     H     YY LG V +  G  R AL  
Sbjct: 417 ADPYIHLGQLYRDMGCYIRSKQMLEKAMKLAPTNH---LSYYVLGNVLVSSGRHREALPF 473

Query: 320 FEKVLEIYP-DNC-ETLKALGHIYVQLGQ 346
            +K +E+ P DNC E ++     Y+ LGQ
Sbjct: 474 LQKSIELCPKDNCGEIVRMCAAAYLALGQ 502



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 8/138 (5%)

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           E I  Y G G  +   GD + ALT+F+K ++I     +  K  G +   LG +  A +  
Sbjct: 279 ELIAGYLGRGSARAMSGDLKRALTDFDKAVKINAKCADAYKRRGQVKAALGNVNGALDDF 338

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVI 412
            +A K+ P +A ++   G L  S      L  F  A   LKK+ +  P   +V+N + + 
Sbjct: 339 TQAIKLSPEEADSYRQRGSLFHS------LGVFDKASDDLKKSLKYAPGDAQVINELALC 392

Query: 413 HFEKGEFESAHQSFKDAL 430
               G  + A  ++  A+
Sbjct: 393 FNGMGLVDEAINAYTRAI 410


>gi|384208243|ref|YP_005593963.1| hypothetical protein Bint_0754 [Brachyspira intermedia PWS/A]
 gi|343385893|gb|AEM21383.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 420

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 152/357 (42%), Gaps = 26/357 (7%)

Query: 7   KQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 66
           KQ  +  F  I++     +ID             LN L  Y+ Y  K   K    E  + 
Sbjct: 70  KQNFIVSFTNIVDNKKEVDIDR------------LNNLTDYHDYNSKGIYKSANGE--YA 115

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
            A +YY++A +++ +    +  K       G +++A   +   +E   D   A   +  +
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLL 175

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
           + + G   ++++ + +AL + P+   A     GL   +LG   +A + F +A++L+P   
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYN-NKGLLEDELGFSKEAIKDFSKAIKLNPNYA 234

Query: 187 EALVALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
            A     +    A +  G+  + ++   +A ++ P  A+A N   N     G   L E+ 
Sbjct: 235 LAYNNRGI----AKDNLGLYEEAIKDYDKAIKLNPNYALAYNSRGNAKDNLG---LYEEA 287

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
            E         P  + +Y N   + ++   YE+A   Y  ++K    P+ + F Y   G 
Sbjct: 288 IEDFNKAIKLKPDNTDAYNNRGNTKYNLELYEEAIKDYDKAIKL--DPN-YAFAYNNRGN 344

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            +  LG +  A+ +F+K +++ PD  +     G     LG  E+A +  +KA K+DP
Sbjct: 345 AKDNLGLYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEALKDYKKALKLDP 401



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 141/354 (39%), Gaps = 55/354 (15%)

Query: 79  DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           D H+   +  KG    A GE  +A   +   ++ + +   A   +A  +   G   +++E
Sbjct: 97  DYHD---YNSKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIE 153

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 198
            Y +A+++      A     GL +  LG L +A + F +AL +DP   +A     +++  
Sbjct: 154 EYDKAIELRADYTYAY-YNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLE-- 210

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 258
            +E    ++ ++   +A ++ P      NY                    ALA  N G  
Sbjct: 211 -DELGFSKEAIKDFSKAIKLNP------NY--------------------ALAYNNRGIA 243

Query: 259 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 318
           K     NL     +  DY+KA          I     +   Y   G  +  LG +  A+ 
Sbjct: 244 KD----NLGLYEEAIKDYDKA----------IKLNPNYALAYNSRGNAKDNLGLYEEAIE 289

Query: 319 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS 378
           +F K +++ PDN +     G+    L   E+A +   KA K+DP  A A+ + G      
Sbjct: 290 DFNKAIKLKPDNTDAYNNRGNTKYNLELYEEAIKDYDKAIKLDPNYAFAYNNRG------ 343

Query: 379 DTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           +    L  ++ A     KA +  P   +  NN G+     G +E A + +K AL
Sbjct: 344 NAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEALKDYKKAL 397


>gi|295677297|ref|YP_003605821.1| hypothetical protein BC1002_2251 [Burkholderia sp. CCGE1002]
 gi|295437140|gb|ADG16310.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
          Length = 628

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 40/274 (14%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           GR  D+   Y+  L  +PS   A+ L +G+ R++ GQ  +A    +RA+ L PE+     
Sbjct: 28  GRLDDAERGYRATLDHNPSHVDALHL-LGVLRHQQGQHAEAAALVRRAVDLRPEDA---- 82

Query: 191 ALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
           AL +    A +A G I   +E+ + A  + P   MA   L N +   G+H       E +
Sbjct: 83  ALQLNLGNALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAFERS 142

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKA----------------GLYYMA-SVKEINK 292
           L +    P  + S+ NL  + H+ G + +A                 L  M  S+  +++
Sbjct: 143 LRLQ---PEDASSHNNLGNALHALGRHAEAIASFRRALELRPGHAGALNNMGMSLNALDR 199

Query: 293 PHE--------------FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           P E              F+  ++ L       G    A+ +FE  L + P+    +  +G
Sbjct: 200 PDEAVPCFEAALAVEPRFVAAHFNLANTFDATGRHAQAVASFEAALRLQPNLPPAIYGMG 259

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
           +    LG+ E+A   L +A  +DP+ A A++ LG
Sbjct: 260 NALAALGRAEQALPYLERAVGLDPQFALAWLALG 293



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 14/242 (5%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           G+   ++E ++ AL + P+ P A    +G     LG+   A  AF+R+L+L PE+  +  
Sbjct: 96  GQIDAAIEQFRNALTLAPTFPMA-HYNLGNAYASLGRHEDAADAFERSLRLQPEDASSHN 154

Query: 191 ALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
            L      A  A G   + +   +RA E+ P  A ALN +        +        E A
Sbjct: 155 NLG----NALHALGRHAEAIASFRRALELRPGHAGALNNMGMSLNALDRPDEAVPCFEAA 210

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQL 308
           LAV    P    +++NLA ++ + G + +A   + A+++ + N P       YG+G    
Sbjct: 211 LAVE---PRFVAAHFNLANTFDATGRHAQAVASFEAALRLQPNLPPAI----YGMGNALA 263

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
            LG    AL   E+ + + P       ALG  +  LG    A   L +A ++ P  A A 
Sbjct: 264 ALGRAEQALPYLERAVGLDPQFALAWLALGTAHQALGAHAAAVRALDQALRLRPDLASAH 323

Query: 369 ID 370
           ++
Sbjct: 324 MN 325


>gi|237833307|ref|XP_002365951.1| signal transduction protein, putative [Toxoplasma gondii ME49]
 gi|211963615|gb|EEA98810.1| signal transduction protein, putative [Toxoplasma gondii ME49]
 gi|221508918|gb|EEE34487.1| signal transduction protein, putative [Toxoplasma gondii VEG]
          Length = 978

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 135/342 (39%), Gaps = 68/342 (19%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRA 143
           W  KG  L A G +++A    +  L  D  N  AL  +G A  E  RG    ++E Y+ +
Sbjct: 175 WNCKGVTLRALGRLQEALDCCREALRLDPRNTNALNNIGVALKE--RGELLQAVEHYRAS 232

Query: 144 LQVHPSCPGA-IRLGIGL--------------------------------CRYKLGQLG- 169
           L  +P  P     L + L                                C Y LG +  
Sbjct: 233 LVANPHQPTCRTNLAVALTDLGTKLKQEKKLQAALVCYTEALTADPTYAPCYYNLGVIHA 292

Query: 170 ------KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--- 220
                  A Q ++ A +L+P  VEA           N    + K + K++ A   Y    
Sbjct: 293 ETDDPHTALQMYREATRLNPSYVEAY----------NNMGAVCKNLGKLEDAISFYEKAL 342

Query: 221 YC----AMALNYLANHFFFTGQHFLVEQLTETALAVTN----HGPTKSHSYYNLARSYHS 272
            C     M+L+ +A      G      +  + A+++      + P  S +YYNL  +Y  
Sbjct: 343 ACNANYQMSLSNMAVALTDLGTQQKASEGAKKAISLYKKALIYNPYYSDAYYNLGVAYAD 402

Query: 273 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 332
              ++KA + Y  +V    +  E    Y  +G +     +   A   + K LEI PD  +
Sbjct: 403 LHKFDKALVNYQLAVAFNPRCAEA---YNNMGVIHKDRENTDQATVYYNKALEINPDFSQ 459

Query: 333 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
           TL  LG +Y   G+I +A    ++A +++P  A+A+ +LG L
Sbjct: 460 TLNNLGVLYTCTGKIGEALHFAKRAIEVNPNYAEAYNNLGVL 501



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 100/267 (37%), Gaps = 24/267 (8%)

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETL--KALG-HIYVQLGQIEKAQELLRKAAKID-- 361
           Q    D R A  N   V ++    C +L  K+   H     G    A E+L+KAA  +  
Sbjct: 96  QRNCCDGRPAACNHRAVSDV----CASLPEKSFARHFLTSSGTFPSAAEILKKAAFFNSG 151

Query: 362 --PRDAQAFIDLGELLISSDT------GAALDAFKTARTLLKKAGEEVPIE-----VLNN 408
             P DA    + G  + + D       G  L A    +  L    E + ++      LNN
Sbjct: 152 NRPHDALLLCNAGLEVYAEDADLWNCKGVTLRALGRLQEALDCCREALRLDPRNTNALNN 211

Query: 409 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 468
           IGV   E+GE   A + ++ +L          +     + D    + Q K +Q       
Sbjct: 212 IGVALKERGELLQAVEHYRASLVANPHQPTCRTNLAVALTDLGTKLKQEKKLQAALVCYT 271

Query: 469 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 528
           +    +  +      +NL  +  +  D   A  +YR        YV+AY  + A+ K   
Sbjct: 272 EALTADPTY--APCYYNLGVIHAETDDPHTALQMYREATRLNPSYVEAYNNMGAVCKNLG 329

Query: 529 NLQLSIELVNEALKVNGKYPNALSMLG 555
            L+ +I    +AL  N  Y  +LS + 
Sbjct: 330 KLEDAISFYEKALACNANYQMSLSNMA 356


>gi|456354096|dbj|BAM88541.1| O-linked N-acetylglucosamine transferase, SPINDLY family [Agromonas
           oligotrophica S58]
          Length = 740

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 128/326 (39%), Gaps = 30/326 (9%)

Query: 113 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
           +R     LL QA   +  GR++D+     + L + P    A+ L +G      G+L  A 
Sbjct: 19  NRKQADGLLPQAVAAYRSGRHADAQTICGQILALVPDHFEALHL-LGASALDSGRLDLAE 77

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 232
           QA  RA+ ++P N EA    A + L  +      +     +RA  + P  A AL  L N 
Sbjct: 78  QALARAVAVEPRNAEAQ---ANLGLVLSSMKRYEEARAVQERAIALKPNFATALTGLGNT 134

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN-------LARSYHSKGDYEKAGLYYMA 285
                   L  Q  E         P  + +Y N       L R+  ++  +++A      
Sbjct: 135 LM---NMQLFAQAIEAHDRAIAAKPDYADAYCNRGMAQLLLLRNEEARQSFDRA------ 185

Query: 286 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 345
               +      +   +G G V + L  F  AL  F   L I PD    +   G +Y+Q+ 
Sbjct: 186 ----LALAPRHMQATFGKGLVNINLRHFEQALVAFNAALAIKPDAAAVIAQRGRLYIQMA 241

Query: 346 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEVPIE 404
           + E+A+     A   DP    A +    + + ++    A+ A K  R L +    EV   
Sbjct: 242 RFEEAEADFNAALATDPMLETALLGRAHVCVLTERIAPAMAACK--RVLERNPASEV--- 296

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDAL 430
            L  +G    ++G+  +A Q F  AL
Sbjct: 297 ALAWLGACFAKQGDTAAAIQHFDRAL 322



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)

Query: 64  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 123
           HF  A   +N A  I     +    +G+L +     E+A + F   L  D     ALLG+
Sbjct: 208 HFEQALVAFNAALAIKPDAAAVIAQRGRLYIQMARFEEAEADFNAALATDPMLETALLGR 267

Query: 124 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 183
           A V     R + ++   KR L+ +P+   A+   +G C  K G    A Q F RAL++ P
Sbjct: 268 AHVCVLTERIAPAMAACKRVLERNPASEVALAW-LGACFAKQGDTAAAIQHFDRALEIKP 326

Query: 184 ENVEALV 190
           +  +A++
Sbjct: 327 DFEDAIL 333


>gi|242081821|ref|XP_002445679.1| hypothetical protein SORBIDRAFT_07g024110 [Sorghum bicolor]
 gi|241942029|gb|EES15174.1| hypothetical protein SORBIDRAFT_07g024110 [Sorghum bicolor]
          Length = 910

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 156/388 (40%), Gaps = 62/388 (15%)

Query: 91  QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 150
            +L ++ +   A + + IVLE +  NV AL+G+      +     ++E +   +++ P  
Sbjct: 42  NILRSRNKFTDAVNLYNIVLEKEGTNVEALIGKGICLQAQNLPRQAIECFTEVVKIEPGN 101

Query: 151 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQAN--EAAGIR 206
             A+    G+     G L +A +A+Q+A   DP    A  L+A+ + DL  +   A    
Sbjct: 102 ACALT-HCGMIYKDEGHLVEAAEAYQKARTADPSYKPASELLAIVLTDLGTSLKLAGNTE 160

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHS 262
           +G++K   A E+        N+ A  ++  G  +      E AL+         P  + +
Sbjct: 161 EGIQKYCEALEVD-------NHYAPAYYNLGVVYSEMMQFEMALSCYEKAALERPLYAEA 213

Query: 263 YYNLARSYHSKGDYEKAGLYY-----MASVKEINKPHEFIF------------------- 298
           Y N+   Y ++GD E A   Y     ++   EI K +  I                    
Sbjct: 214 YCNMGVIYKNRGDLEAAIACYERCLTISPNFEIAKNNMAIALTDLGTKVKIEGDINQGVA 273

Query: 299 --------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
                           Y LG    ++ +F  A+  +E  L   P   E    LG IY   
Sbjct: 274 YYKKALFYNWHYADAMYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDR 333

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI- 403
             ++KA E  + A  I P  AQ+  +LG  ++ +  G       +A ++++KA    P  
Sbjct: 334 DNLDKAVECYQMALSIKPLFAQSLNNLG--VVYTVQG----KMDSAASMIEKAIHANPTY 387

Query: 404 -EVLNNIGVIHFEKGEFESAHQSFKDAL 430
            E  NN+GV++ + G    A  +++  L
Sbjct: 388 AEAYNNLGVLYRDAGSITLAIHAYERCL 415



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 111/288 (38%), Gaps = 57/288 (19%)

Query: 314 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA------ 367
           R A+  F +V++I P N   L   G IY   G + +A E  +KA   DP    A      
Sbjct: 85  RQAIECFTEVVKIEPGNACALTHCGMIYKDEGHLVEAAEAYQKARTADPSYKPASELLAI 144

Query: 368 -FIDLG-ELLISSDT-------GAALDA--------------------FKTARTLLKKAG 398
              DLG  L ++ +T         AL+                     F+ A +  +KA 
Sbjct: 145 VLTDLGTSLKLAGNTEEGIQKYCEALEVDNHYAPAYYNLGVVYSEMMQFEMALSCYEKAA 204

Query: 399 EEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALG---------DGIWLTLLDSKTKTYV 447
            E P+  E   N+GVI+  +G+ E+A   ++  L          + + + L D  TK  +
Sbjct: 205 LERPLYAEAYCNMGVIYKNRGDLEAAIACYERCLTISPNFEIAKNNMAIALTDLGTKVKI 264

Query: 448 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 507
                  + +    LF+            W+    ++NL     ++ +   A V Y L L
Sbjct: 265 EGDINQGVAYYKKALFYN-----------WHYADAMYNLGVAYGEMLNFEMAIVFYELAL 313

Query: 508 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
                  +A   L  I K R+NL  ++E    AL +   +  +L+ LG
Sbjct: 314 HFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPLFAQSLNNLG 361


>gi|225619724|ref|YP_002720981.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214543|gb|ACN83277.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 424

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 29/357 (8%)

Query: 25  EIDEYYADVRYERIAILNALGVYYTYLGK-------IETKQREKEE---------HFILA 68
           EIDE YA++ Y R    + LG+Y   +         + T  +  ++         ++  A
Sbjct: 62  EIDENYAELYYNRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEA 121

Query: 69  TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 128
            +  +KA  +D +    ++ +  + L   +  +A   +K VLE D   V A  G    + 
Sbjct: 122 IKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKR 181

Query: 129 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
           + G Y +++ +Y + +++  S         G C+  LG   +A     +AL++  E  +A
Sbjct: 182 SIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDA 241

Query: 189 LV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
                 A  +L+       ++ +E   +A E+ P    A N   N     G   L E   
Sbjct: 242 YNNRGTAKYNLEL-----YKEAIEDFDKAIELSPQYFYAYNNRGNSKSALG---LYEDAI 293

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
           E      N  P    +YYN A + ++ G + +A   Y   V E++  H  I  YY     
Sbjct: 294 EDFNIAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDI-VIELDSNH--INAYYNRALS 350

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
              L D+  A+ N++KV+E+ P + E     G     +G  E+A +   KA +ID  
Sbjct: 351 YYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGLYEEALKDYDKAIEIDSN 407



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 19/319 (5%)

Query: 55  ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 114
           E  Q  +E  F  A   + KA   D +    +   G    A G  E+A + +   +E D 
Sbjct: 6   EGLQLFRETQFEKAAALFIKALEEDRNNSEIYNYLGITKQALGFYEEAINYYSKGIEIDE 65

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
           +       +A  E N G Y  ++  Y + +++ P+   A     G  +  LG   +A + 
Sbjct: 66  NYAELYYNRANCESNLGLYEAAINDYDKVIELVPTHSKAYD-DRGYAKGNLGYYEEAIKD 124

Query: 175 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
             +A+ LD  N++A +  A + L + +     + +E  ++  E+      A N + +   
Sbjct: 125 IDKAIVLDSNNIDAYIDRAFIKLMSKKYI---EAIEDYKKVLELDDTEVYAYNGIGDAKR 181

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL-YYMASVKEINKP 293
             G       L E A++  N     S+S  N + +Y+++G   K GL  Y  ++ +INK 
Sbjct: 182 SIG-------LYEEAISYYNKVIEISNS--NSSYAYNNRGA-CKIGLGLYNEAIIDINKA 231

Query: 294 ----HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 349
                E+   Y   G  +  L  ++ A+ +F+K +E+ P         G+    LG  E 
Sbjct: 232 LEIYDEYTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYED 291

Query: 350 AQELLRKAAKIDPRDAQAF 368
           A E    A  I+P+   A+
Sbjct: 292 AIEDFNIAINIEPKYIDAY 310



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
           G YE+A  YY   + EI++ +  +  YY     +  LG + +A+ +++KV+E+ P + + 
Sbjct: 48  GFYEEAINYYSKGI-EIDENYAEL--YYNRANCESNLGLYEAAINDYDKVIELVPTHSKA 104

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTART 392
               G+    LG  E+A + + KA  +D  +  A+ID   + L+S     A++ +K    
Sbjct: 105 YDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLE 164

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESA 422
           L     ++  +   N IG      G +E A
Sbjct: 165 L-----DDTEVYAYNGIGDAKRSIGLYEEA 189


>gi|166362921|ref|YP_001655194.1| hypothetical protein MAE_01800, partial [Microcystis aeruginosa
           NIES-843]
 gi|166085294|dbj|BAG00002.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 594

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 44/381 (11%)

Query: 65  FILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           F  A   Y++A  I  D+H+   W  +G  L   G +E+A +++   LE   D   A   
Sbjct: 200 FAEAIASYDRALEIKPDLHQ--AWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYN 257

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +     N GR+++++  Y +AL++ P    A     G+    LG+  +A  ++ RAL++ 
Sbjct: 258 RGIALGNLGRFAEAIASYDKALEIKPDDHEAW-YNRGIALGNLGRFAEAIASYDRALEIK 316

Query: 183 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           P+  +A     +A+ +L   E A     +    +A EI P           H  +  +  
Sbjct: 317 PDLHQAWYNRGIALGNLGRLEEA-----IASYDQALEIKP---------DQHEAWYNRGI 362

Query: 241 LVEQLTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
            +  L   A A+ ++       P    ++Y    +    G + +A   Y  ++ EI KP 
Sbjct: 363 ALGNLGRFAEAIASYDKALEIKPDDHQAWYGRGFALDDLGRFAEAIASYDKAL-EI-KP- 419

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
           ++   +Y  G     LG F  A+ ++++ LE  PD  E     G     LG++E+A    
Sbjct: 420 DYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEALASY 479

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDA---FKTARTLLKKAGEEVPI--EVLNNI 409
            KA +  P   +A+         ++ G ALD    F+ A     KA E  P   E  NN 
Sbjct: 480 DKALEFKPDLHEAW---------NNRGIALDNLRRFEQALASYDKALEIKPDLHEAWNNR 530

Query: 410 GVIHFEKGEFESAHQSFKDAL 430
           G+       FE A  S+  AL
Sbjct: 531 GIALANLRRFEQALASYDRAL 551



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 138/347 (39%), Gaps = 54/347 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y++A  I   +   W  +G  L   G   +A +++   LE   D+  A   +    
Sbjct: 237 AIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHEAWYNRGIAL 296

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            N GR+++++  Y RAL++ P    A     G+    LG+L +A  ++ +AL++ P+  E
Sbjct: 297 GNLGRFAEAIASYDRALEIKPDLHQAW-YNRGIALGNLGRLEEAIASYDQALEIKPDQHE 355

Query: 188 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A     +A+ +L         + +    +A EI P          +H  + G+ F ++ L
Sbjct: 356 AWYNRGIALGNL-----GRFAEAIASYDKALEIKP---------DDHQAWYGRGFALDDL 401

Query: 246 TETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF- 298
              A A+ ++       P    ++YN   +  + G +E+A   Y  +++     HE    
Sbjct: 402 GRFAEAIASYDKALEIKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVN 461

Query: 299 ---PYYGLGQVQLKLGD---------------------------FRSALTNFEKVLEIYP 328
                  LG+++  L                             F  AL +++K LEI P
Sbjct: 462 RGVALGNLGRLEEALASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKP 521

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
           D  E     G     L + E+A     +A +I P   QA+ + G  L
Sbjct: 522 DLHEAWNNRGIALANLRRFEQALASYDRALEIKPDFHQAWTNRGNAL 568



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 18/307 (5%)

Query: 65  FILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 122
           F  A   Y++A  I  D+H+   W  +G  L   G +E+A +++   LE   D   A   
Sbjct: 302 FAEAIASYDRALEIKPDLHQ--AWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYN 359

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           +     N GR+++++  Y +AL++ P    A   G G     LG+  +A  ++ +AL++ 
Sbjct: 360 RGIALGNLGRFAEAIASYDKALEIKPDDHQAW-YGRGFALDDLGRFAEAIASYDKALEIK 418

Query: 183 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
           P+  +A      A+ +L   E A     +    RA E  P    A     N     G   
Sbjct: 419 PDYHQAWYNRGFALGNLGRFEQA-----IASYDRALEFKPDLHEAW---VNRGVALGNLG 470

Query: 241 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 300
            +E+   +        P    ++ N   +  +   +E+A   Y  +++     HE    +
Sbjct: 471 RLEEALASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKPDLHE---AW 527

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 360
              G     L  F  AL ++++ LEI PD  +     G+    LG+  +A     +A  I
Sbjct: 528 NNRGIALANLRRFEQALASYDRALEIKPDFHQAWTNRGNALRNLGRWAEAIASYYQAVAI 587

Query: 361 DPRDAQA 367
              D QA
Sbjct: 588 KSDDHQA 594


>gi|427738890|ref|YP_007058434.1| hypothetical protein Riv7116_5517 [Rivularia sp. PCC 7116]
 gi|427373931|gb|AFY57887.1| TPR repeat-containing protein [Rivularia sp. PCC 7116]
          Length = 555

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 126/300 (42%), Gaps = 36/300 (12%)

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G  C  FN+  Y  ++E Y +AL++H S   +     G   Y L    +A   F +A+ +
Sbjct: 245 GDEC--FNKKLYDAAIENYSQALEIHKSDANSY-YKRGNAFYCLKNYSQAIADFTQAVNI 301

Query: 182 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ--- 238
           +P   +A +      L   E A     +E   +A  I  Y A+A    A+     G    
Sbjct: 302 NPNFAKAYIKSG---LTRYELADYYGAIEDYTQAIRINSYDAVAFQNRADARSMIGDSQG 358

Query: 239 -------------HFLVEQLTETA-----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 280
                        H L  Q  E+      +   +H  T  ++  NL R  H +       
Sbjct: 359 AIEDYTQAGKINPHLLETQRLESQQKNLNIEENSHNSTTDNNKDNLERENHQRA------ 412

Query: 281 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 340
           +     V EI+ P + +  Y   G  +  LGD+  A+ +F K + I P + +     G+ 
Sbjct: 413 IEVFTQVIEIS-PDDAV-GYKKRGNARCDLGDYLPAIEDFTKAIGINPYDGDAYFYRGNS 470

Query: 341 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 399
           + +LG   +A E   +A +I+P DA A+I+ G++     DT  A+  F+ A  L +KAG+
Sbjct: 471 FYELGNKPEAIEDYTQAIQINPNDADAYINRGKVRDELGDTQGAIADFQIAADLYQKAGK 530


>gi|340376830|ref|XP_003386934.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Amphimedon queenslandica]
          Length = 1029

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 179/453 (39%), Gaps = 29/453 (6%)

Query: 115 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 174
           DN   LL  + + F   R   S  F   A++ + +   A    +G    + GQL +A Q 
Sbjct: 31  DNTGCLLLLSSIHFQCRRLEKSAHFSTLAIKKNLTLAEAYS-NLGNVFKEKGQLDQALQH 89

Query: 175 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
           ++ A+ L P+ V+  + LA   L AN    +   +E    A  I P      + L N + 
Sbjct: 90  YRHAVHLKPDFVDGYINLAAA-LVAN--GDLLDAVEAYNTALHINPDLYGVRSDLGNLYK 146

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 294
             G+   +E      +      PT + ++ NL   Y+S+G+   A  ++    K +    
Sbjct: 147 ALGR---LEDAKSCYMKAIETHPTFAVAWSNLGCVYNSQGEIWLAIHHFE---KAVQLDP 200

Query: 295 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 354
            F   Y  LG V  +   F  A+  + + L + P++      L  +Y + G IE A +  
Sbjct: 201 AFQDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAIVHGNLACVYYEQGLIELAIDTY 260

Query: 355 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 414
           ++A ++ P    A+ +L   L   + G   +A +     LK        + LNN+  I  
Sbjct: 261 KRAIELQPHFPDAYCNLANAL--KEQGKVAEAEECYNIALKMNSSHA--DSLNNLANIKR 316

Query: 415 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM---QLFHRFENDGN 471
           E+G  + A + +K AL          S          AS+LQ +      L H  E    
Sbjct: 317 EQGHIDEAIKLYKRALEIMPEFAAAHSNL--------ASILQMQGKLQDALLHYKEA--- 365

Query: 472 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 531
            + +  N      N+   L+++ D   A   Y   +     + DA+  LA+I K   N+ 
Sbjct: 366 -IRIHPNFADAYSNMGNTLKEMQDFQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIP 424

Query: 532 LSIELVNEALKVNGKYPNALSMLGDLELKNDDW 564
            +I     ALK+   +P+A   L        DW
Sbjct: 425 EAITSYRMALKLKPDFPDAFCNLAHCLQIVCDW 457



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 135/333 (40%), Gaps = 50/333 (15%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA ++D      ++  G +L      ++A 
Sbjct: 168 FAVAWSNLGCVYNSQGE----IWLAIHHFEKAVQLDPAFQDAYINLGNVLKEARIFDRAV 223

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
           +A+   L    ++       ACV + +G    +++ YKRA+++ P  P A    +     
Sbjct: 224 AAYLRALSLSPNHAIVHGNLACVYYEQGLIELAIDTYKRAIELQPHFPDAY-CNLANALK 282

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + G++ +A + +  AL+++  + ++L  LA +     E   I + ++  +RA EI P  A
Sbjct: 283 EQGKVAEAEECYNIALKMNSSHADSLNNLANIK---REQGHIDEAIKLYKRALEIMPEFA 339

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A                                   HS  NLA     +G  + A L+Y
Sbjct: 340 AA-----------------------------------HS--NLASILQMQGKLQDALLHY 362

Query: 284 MASVKEINKPHE-FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
               KE  + H  F   Y  +G    ++ DF+ AL  + + ++I P   +    L  I+ 
Sbjct: 363 ----KEAIRIHPNFADAYSNMGNTLKEMQDFQGALQCYSRAIQINPAFADAHSNLASIHK 418

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
             G I +A    R A K+ P    AF +L   L
Sbjct: 419 DSGNIPEAITSYRMALKLKPDFPDAFCNLAHCL 451



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 14/329 (4%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A + YN A  I+          G L  A G +E A S +   +E       A     CV 
Sbjct: 120 AVEAYNTALHINPDLYGVRSDLGNLYKALGRLEDAKSCYMKAIETHPTFAVAWSNLGCVY 179

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
            ++G    ++  +++A+Q+ P+   A I LG  L   ++    +A  A+ RAL L P + 
Sbjct: 180 NSQGEIWLAIHHFEKAVQLDPAFQDAYINLGNVLKEARI--FDRAVAAYLRALSLSPNHA 237

Query: 187 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 246
                LA +     E   I   ++  +RA E+ P+   A   LAN     G+    E+  
Sbjct: 238 IVHGNLACVYY---EQGLIELAIDTYKRAIELQPHFPDAYCNLANALKEQGKVAEAEECY 294

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
             AL + +   + + S  NLA     +G  ++A   Y  +++ +    EF   +  L  +
Sbjct: 295 NIALKMNS---SHADSLNNLANIKREQGHIDEAIKLYKRALEIMP---EFAAAHSNLASI 348

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
               G  + AL ++++ + I+P+  +    +G+   ++   + A +   +A +I+P  A 
Sbjct: 349 LQMQGKLQDALLHYKEAIRIHPNFADAYSNMGNTLKEMQDFQGALQCYSRAIQINPAFAD 408

Query: 367 AFIDLGELLISSDTGAALDAFKTARTLLK 395
           A  +L    I  D+G   +A  + R  LK
Sbjct: 409 AHSNLAS--IHKDSGNIPEAITSYRMALK 435



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 85/380 (22%), Positives = 152/380 (40%), Gaps = 58/380 (15%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G +   KG+++QA   ++  +    D V   +  A      G   D++E Y  AL ++P 
Sbjct: 74  GNVFKEKGQLDQALQHYRHAVHLKPDFVDGYINLAAALVANGDLLDAVEAYNTALHINPD 133

Query: 150 CPGAIRLGIGLCRYKLGQLGKARQA----------------------------------F 175
             G +R  +G     LG+L  A+                                    F
Sbjct: 134 LYG-VRSDLGNLYKALGRLEDAKSCYMKAIETHPTFAVAWSNLGCVYNSQGEIWLAIHHF 192

Query: 176 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 235
           ++A+QLDP   +A + L  +     EA    + +    RA  + P  A+    LA  ++ 
Sbjct: 193 EKAVQLDPAFQDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAIVHGNLACVYYE 249

Query: 236 TGQHFLVEQLTET---ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
            G   L+E   +T   A+ +  H P    +Y NLA +   +G   +A   Y  ++K +N 
Sbjct: 250 QG---LIELAIDTYKRAIELQPHFPD---AYCNLANALKEQGKVAEAEECYNIALK-MNS 302

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
            H        L  ++ + G    A+  +++ LEI P+       L  I    G+++ A  
Sbjct: 303 SHADSL--NNLANIKREQGHIDEAIKLYKRALEIMPEFAAAHSNLASILQMQGKLQDALL 360

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIG 410
             ++A +I P  A A+ ++G      +T   +  F+ A     +A +  P   +  +N+ 
Sbjct: 361 HYKEAIRIHPNFADAYSNMG------NTLKEMQDFQGALQCYSRAIQINPAFADAHSNLA 414

Query: 411 VIHFEKGEFESAHQSFKDAL 430
            IH + G    A  S++ AL
Sbjct: 415 SIHKDSGNIPEAITSYRMAL 434



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 154/378 (40%), Gaps = 51/378 (13%)

Query: 233 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 288
              +  HF   +L ++A    LA+  +  T + +Y NL   +  KG  ++A  +Y  +V 
Sbjct: 37  LLLSSIHFQCRRLEKSAHFSTLAIKKNL-TLAEAYSNLGNVFKEKGQLDQALQHYRHAVH 95

Query: 289 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 348
              KP +F+  Y  L    +  GD   A+  +   L I PD       LG++Y  LG++E
Sbjct: 96  L--KP-DFVDGYINLAAALVANGDLLDAVEAYNTALHINPDLYGVRSDLGNLYKALGRLE 152

Query: 349 KAQELLRKAAKIDPRDAQAFIDLGELLISS----------DTGAALD-AFKTARTLLKKA 397
            A+    KA +  P  A A+ +LG +  S           +    LD AF+ A   L   
Sbjct: 153 DAKSCYMKAIETHPTFAVAWSNLGCVYNSQGEIWLAIHHFEKAVQLDPAFQDAYINLGNV 212

Query: 398 GEEVPI-------------------EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 438
            +E  I                    V  N+  +++E+G  E A  ++K A+        
Sbjct: 213 LKEARIFDRAVAAYLRALSLSPNHAIVHGNLACVYYEQGLIELAIDTYKRAI-------- 264

Query: 439 LDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLARLLEQIHDT 496
              + + +  DA  ++      Q       +  ++ L  N      L NLA +  +    
Sbjct: 265 ---ELQPHFPDAYCNLANALKEQGKVAEAEECYNIALKMNSSHADSLNNLANIKREQGHI 321

Query: 497 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 556
             A  LY+  L    ++  A+  LA+I + +  LQ ++    EA++++  + +A S +G+
Sbjct: 322 DEAIKLYKRALEIMPEFAAAHSNLASILQMQGKLQDALLHYKEAIRIHPNFADAYSNMGN 381

Query: 557 LELKNDDWVKAKETFRAA 574
              +  D+  A + +  A
Sbjct: 382 TLKEMQDFQGALQCYSRA 399


>gi|167837462|ref|ZP_02464345.1| TPR domain protein [Burkholderia thailandensis MSMB43]
          Length = 331

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 14/278 (5%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G ++ A   ++  L  +  +  AL     +   +GR+ ++ +   RA+++ P+   A++L
Sbjct: 15  GRLDDAEHGYRAALATNPADADALHLFGVLRHQQGRHEEAADLVGRAVELRPN-DAALQL 73

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK--GMEKMQR 214
            +G     LG+L +A + F+ AL L PE       LA  +L    AA  R    ++  +R
Sbjct: 74  NLGNAFKALGRLDEAIERFRNALTLAPE-----FPLAHYNLGNAYAAQERHDDAVDAFER 128

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           A  + P  A   N L N     G+H         AL +    P  + ++ NL  +  + G
Sbjct: 129 ALALTPGDASIHNNLGNALNALGRHDGALAAFRRALELR---PGHAGAHNNLGMALAALG 185

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           D ++A  ++ A++    +P  F+  ++ LG     +G    AL  FE  L + P     L
Sbjct: 186 DTDEAVAHFRAALAA--EP-RFVAAHFNLGNALDAVGRHAQALRAFESALALQPRFPLAL 242

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             L +    LG+   A     +A  +DP    A+++LG
Sbjct: 243 FGLANALAALGRHRDALPHYERAVGLDPSFVLAWLNLG 280



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 125/303 (41%), Gaps = 20/303 (6%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           GR  D+   Y+ AL  +P+   A+ L  G+ R++ G+  +A     RA++L P +     
Sbjct: 15  GRLDDAEHGYRAALATNPADADALHL-FGVLRHQQGRHEEAADLVGRAVELRPNDA---- 69

Query: 191 ALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 249
           AL +    A +A G + + +E+ + A  + P   +A   L N +    +H       E A
Sbjct: 70  ALQLNLGNAFKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFERA 129

Query: 250 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 309
           LA+T   P  +  + NL  + ++ G ++ A L       E+   H     +  LG     
Sbjct: 130 LALT---PGDASIHNNLGNALNALGRHDGA-LAAFRRALELRPGHAGA--HNNLGMALAA 183

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           LGD   A+ +F   L   P        LG+    +G+  +A      A  + PR   A  
Sbjct: 184 LGDTDEAVAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALRAFESALALQPRFPLALF 243

Query: 370 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFK 427
            L   L      AAL   + A    ++A    P  VL   N+G  H   G  E A ++F 
Sbjct: 244 GLANAL------AALGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFD 297

Query: 428 DAL 430
            AL
Sbjct: 298 QAL 300



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 18/236 (7%)

Query: 163 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIY 219
           ++ G+L  A   ++ AL  +P + +AL    V+  Q     EAA +      + RA E+ 
Sbjct: 12  HRAGRLDDAEHGYRAALATNPADADALHLFGVLRHQQGRHEEAADL------VGRAVELR 65

Query: 220 PY-CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 278
           P   A+ LN L N F   G+   +++  E         P    ++YNL  +Y ++  ++ 
Sbjct: 66  PNDAALQLN-LGNAFKALGR---LDEAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDD 121

Query: 279 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 338
           A   +  ++            +  LG     LG    AL  F + LE+ P +      LG
Sbjct: 122 AVDAFERALALTPGDASI---HNNLGNALNALGRHDGALAAFRRALELRPGHAGAHNNLG 178

Query: 339 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
                LG  ++A    R A   +PR   A  +LG  L +    A AL AF++A  L
Sbjct: 179 MALAALGDTDEAVAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALRAFESALAL 234



 Score = 43.5 bits (101), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 74/182 (40%), Gaps = 29/182 (15%)

Query: 9   GKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHF--I 66
           G +  FR+ LE             +R       N LG+    LG  +    E   HF   
Sbjct: 155 GALAAFRRALE-------------LRPGHAGAHNNLGMALAALGDTD----EAVAHFRAA 197

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           LA +    A+  ++         G  L A G   QA  AF+  L        AL G A  
Sbjct: 198 LAAEPRFVAAHFNL---------GNALDAVGRHAQALRAFESALALQPRFPLALFGLANA 248

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 186
               GR+ D+L  Y+RA+ + PS   A  L +G   + LG    A +AF +AL+LDP + 
Sbjct: 249 LAALGRHRDALPHYERAVGLDPSFVLAW-LNLGTAHHALGAHEMALRAFDQALRLDPSHA 307

Query: 187 EA 188
            A
Sbjct: 308 LA 309


>gi|189183138|ref|YP_001936923.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189179909|dbj|BAG39689.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 502

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 30/318 (9%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A +  N A + + + P  +  KG  L   G+  +A   F + ++ +  N      +    
Sbjct: 163 AIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCV 222

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G++ ++++ +  A++  P+C  A  L  G+C Y+L Q  +A + F  A++     V 
Sbjct: 223 DKLGQHQEAIKIFNLAIKYKPNCEEA-YLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVG 281

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY-LANHFFFTGQHFLVEQLT 246
           A +         N+ A + K +E+ Q A E +    +A+ Y L N   +  +   + +L 
Sbjct: 282 AYL---------NKGACLSK-LEQHQEAIENFD---LAIKYELCNPDTYYNKGACLYELR 328

Query: 247 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY----YMASVKEIN-----KPHEFI 297
           +   AV N      ++  N  ++Y SKG    A LY    Y  +++  N      P++  
Sbjct: 329 QYQEAVENFDLAIKYNP-NFEKAYLSKG----ACLYELRQYQEAIECCNLAIKYNPND-A 382

Query: 298 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 357
             YY  G    KLG  ++A+ N++  ++  P+  +     G    +LGQ ++A E    A
Sbjct: 383 EAYYNKGVCLFKLGQHQAAVENYDLAIKYNPNYVDAYYNKGLCLSKLGQAQEAVENFNLA 442

Query: 358 AKIDPRDAQAFIDLGELL 375
            K +P DA+A+ + G  L
Sbjct: 443 IKYNPNDAEAYYNKGLCL 460



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 40/307 (13%)

Query: 85  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 144
            ++ KG  L   G++++A   F + ++ + +   A L +    +  G+Y +++E    A+
Sbjct: 112 AYLSKGVSLGKLGQLQKAIENFDLAIKHNINYETAYLNKGICLYKLGQYHEAIECCNLAI 171

Query: 145 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 204
           +  P  P A     G+C  KLGQ  +A + F  A++ +P N          D   N+   
Sbjct: 172 KYEPYNPDAYH-SKGMCLDKLGQYHEAIENFDLAIKYEPYNP---------DTYNNKGVC 221

Query: 205 IRKGMEKMQRAFEIYPYCAMALNYLAN-HFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
           + K + + Q A +I+    +A+ Y  N    +  +   + QL +   A+ N         
Sbjct: 222 VDK-LGQHQEAIKIF---NLAIKYKPNCEEAYLNKGMCLYQLEQYKEAIEN--------- 268

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINK------------PHEFIFP--YYGLGQVQLK 309
           ++LA  Y  K +Y  A L   A + ++ +             +E   P  YY  G    +
Sbjct: 269 FDLAIKY--KSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNKGACLYE 326

Query: 310 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 369
           L  ++ A+ NF+  ++  P+  +   + G    +L Q ++A E    A K +P DA+A+ 
Sbjct: 327 LRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYY 386

Query: 370 DLGELLI 376
           + G  L 
Sbjct: 387 NKGVCLF 393



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 50/247 (20%)

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
           +Y +++E +  A++ +P+C  A     G+C  KLGQL KA + F   ++      EA ++
Sbjct: 57  KYQEAIENFDLAIKYNPNCAEA-YYNKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLS 115

Query: 192 LAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
                       G+  G + ++Q+A E +                              L
Sbjct: 116 -----------KGVSLGKLGQLQKAIENFD-----------------------------L 135

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQL 308
           A+  H      +Y N     +  G Y +A      ++K     +E   P  Y+  G    
Sbjct: 136 AIK-HNINYETAYLNKGICLYKLGQYHEAIECCNLAIK-----YEPYNPDAYHSKGMCLD 189

Query: 309 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 368
           KLG +  A+ NF+  ++  P N +T    G    +LGQ ++A ++   A K  P   +A+
Sbjct: 190 KLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAY 249

Query: 369 IDLGELL 375
           ++ G  L
Sbjct: 250 LNKGMCL 256


>gi|428223794|ref|YP_007107891.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
 gi|427983695|gb|AFY64839.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
          Length = 2232

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 16/301 (5%)

Query: 131 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 190
           GR+  +   Y++ L   P    A++L +G+  Y+ G+  +A   +++AL L P   E   
Sbjct: 31  GRFDQAEPIYRQILAQQPQNLDALQL-LGVLAYQTGRGQEAIALYRQALALKPNYAEVHS 89

Query: 191 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
            L V      EA  +   +   QRA  + P  A + N L N     G+  + E +     
Sbjct: 90  NLGVA---LKEAGDLEGAIAHCQRAVALKPDYAGSYNNLGNALQAQGR--IPEAIAAYRR 144

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
           AV    P    +  NL  +   +G + +A   Y  +++   +P   + P+  LG    + 
Sbjct: 145 AVELQ-PGFWEALGNLGNNLRQQGQWSEAMACYQQALQA--QPTA-LDPWLNLGAAWREG 200

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G++  ++  +E+ + ++P   E    LG  Y + GQ+E A     +A  + P  A+A  +
Sbjct: 201 GNWAESIRCYERAIALHPQAAEAHSGLGITYKEAGQLEGAIACYERAIALQPSFAEAHNN 260

Query: 371 LGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           LG    I      A+  ++ A T   +      ++  +N+GV+  E G+  +A   ++ A
Sbjct: 261 LGNAFQIQGRLQEAIACYQQALTHQPRY-----VQAHSNLGVVLQEAGQVAAAIAQYRQA 315

Query: 430 L 430
           L
Sbjct: 316 L 316



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 10/217 (4%)

Query: 156  LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 215
            + + L +Y+ GQL +A Q   +     P + EAL  L ++  Q N    + + ++  Q+ 
Sbjct: 1680 MALALHQYRTGQLDQAAQICHQICDQAPSS-EALHLLGLIAQQQNR---LPEALQFYQQG 1735

Query: 216  FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
              + P      N   N     GQ     Q  + A+A+    P    +Y NL    H++  
Sbjct: 1736 LTLEPDNPRLHNNFGNVLRELGQMPAAVQHYQRAIALD---PRYGEAYCNLGSVLHAQEQ 1792

Query: 276  YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
            +  A   Y  +++  +KP   +  +Y LG    KL  F +AL  +++ + + PD  +  +
Sbjct: 1793 FAAAVTQYRQALQ--HKP-SLLEAHYNLGAALQKLNQFDAALECYQRAIALQPDAPQPYQ 1849

Query: 336  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 372
             LG    +LG+ E+A    ++A  +DP  A AF +LG
Sbjct: 1850 NLGTALQELGRYEEAIAAYQQAIALDPALADAFYNLG 1886



 Score = 43.9 bits (102), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 303  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
            LG +  +      AL  +++ L + PDN       G++  +LGQ+  A +  ++A  +DP
Sbjct: 1715 LGLIAQQQNRLPEALQFYQQGLTLEPDNPRLHNNFGNVLRELGQMPAAVQHYQRAIALDP 1774

Query: 363  RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 420
            R  +A+ +LG +L + +       F  A T  ++A +  P  +E   N+G    +  +F+
Sbjct: 1775 RYGEAYCNLGSVLHAQEQ------FAAAVTQYRQALQHKPSLLEAHYNLGAALQKLNQFD 1828

Query: 421  SAHQSFKDAL 430
            +A + ++ A+
Sbjct: 1829 AALECYQRAI 1838



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 115/301 (38%), Gaps = 46/301 (15%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G  +QA   ++ +L     N+ AL     + +  GR  +++  Y++AL + P+    +  
Sbjct: 31  GRFDQAEPIYRQILAQQPQNLDALQLLGVLAYQTGRGQEAIALYRQALALKPNY-AEVHS 89

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRA 215
            +G+   + G L  A    QRA+ L P+   +   L      A +A G I + +   +RA
Sbjct: 90  NLGVALKEAGDLEGAIAHCQRAVALKPDYAGSYNNLG----NALQAQGRIPEAIAAYRRA 145

Query: 216 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 275
            E+ P    AL  L N+    GQ        + AL      PT    + NL  ++   G+
Sbjct: 146 VELQPGFWEALGNLGNNLRQQGQWSEAMACYQQALQAQ---PTALDPWLNLGAAWREGGN 202

Query: 276 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 335
           + ++   Y  ++    +  E    + GLG    + G    A+  +E+ + + P   E   
Sbjct: 203 WAESIRCYERAIALHPQAAEA---HSGLGITYKEAGQLEGAIACYERAIALQPSFAEAHN 259

Query: 336 ALGHI-----------------------YVQL-----------GQIEKAQELLRKAAKID 361
            LG+                        YVQ            GQ+  A    R+A  +D
Sbjct: 260 NLGNAFQIQGRLQEAIACYQQALTHQPRYVQAHSNLGVVLQEAGQVAAAIAQYRQALALD 319

Query: 362 P 362
           P
Sbjct: 320 P 320



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 82  EPSTWVGKGQL---LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 138
           +P  W   G L   L  +G+  +A + ++  L+A    +   L         G +++S+ 
Sbjct: 149 QPGFWEALGNLGNNLRQQGQWSEAMACYQQALQAQPTALDPWLNLGAAWREGGNWAESIR 208

Query: 139 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 188
            Y+RA+ +HP    A   G+G+   + GQL  A   ++RA+ L P   EA
Sbjct: 209 CYERAIALHPQAAEA-HSGLGITYKEAGQLEGAIACYERAIALQPSFAEA 257



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 23/240 (9%)

Query: 499 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG-DL 557
           A  +YR IL +    +DA   L  +A      Q +I L  +AL +   Y    S LG  L
Sbjct: 36  AEPIYRQILAQQPQNLDALQLLGVLAYQTGRGQEAIALYRQALALKPNYAEVHSNLGVAL 95

Query: 558 ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKE 617
           +   D         RA +   D   SY   +LGN     AL+ + R P+  A        
Sbjct: 96  KEAGDLEGAIAHCQRAVALKPDYAGSYN--NLGN-----ALQAQGRIPEAIAA------- 141

Query: 618 LYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 677
            Y R +        A    G  L ++GQ+  +   + Q  +A   ++     D W+NL  
Sbjct: 142 -YRRAVELQPGFWEALGNLGNNLRQQGQWSEAMACYQQALQAQPTAL-----DPWLNLGA 195

Query: 678 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS 737
            +   GN+A +++ Y+  +       +A   L +  T+ EA Q +       RAI L PS
Sbjct: 196 AWREGGNWAESIRCYERAIALHPQAAEAHSGLGI--TYKEAGQLEGAIACYERAIALQPS 253


>gi|392410444|ref|YP_006447051.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390623580|gb|AFM24787.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 305

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 107/257 (41%), Gaps = 22/257 (8%)

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 179
           L+G+A   F+ G Y +SL+ Y RAL  +PS   ++    G     L Q  KA   +++AL
Sbjct: 14  LVGRAQRAFSEGSYRESLDLYSRALNKNPSQ-SSLYAERGEVFEMLNQPQKAIDDYRKAL 72

Query: 180 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
             DP N +A+  LA M  Q  + A   + ++  +RA           N  + +   T   
Sbjct: 73  HFDPSNRDAMKRLAGMYEQ--KPATFAEALQLYRRALN------GETNTESKNQLLTSIA 124

Query: 240 FLVEQL-TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 298
            L  +L  E A AV           ++L      +GDY  A   Y    K I        
Sbjct: 125 ILQNRLQPEDASAV---------RCWHLGNQAVLRGDYTAAESLY---TKAIALDPMMFQ 172

Query: 299 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 358
            YY  G +  K   F  AL +FE+ + I P         G   ++LG  E A+    +AA
Sbjct: 173 AYYSRGLLNSKADRFAEALGDFEQTVRISPTLRGAYVQKGLANLRLGNAEAARRDFEEAA 232

Query: 359 KIDPRDAQAFIDLGELL 375
           ++DPRD  A      +L
Sbjct: 233 RVDPRDPNALYHFAVVL 249


>gi|390438980|ref|ZP_10227405.1| Serine/threonine protein kinase [Microcystis sp. T1-4]
 gi|389837610|emb|CCI31529.1| Serine/threonine protein kinase [Microcystis sp. T1-4]
          Length = 706

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 149/329 (45%), Gaps = 29/329 (8%)

Query: 110 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 169
           L+ + D + A  G+A       RYS++L  Y++A+Q++P       LG G    KLG+  
Sbjct: 358 LKINPDYLEAWQGKADTLLALQRYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLGKNQ 417

Query: 170 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM----QRAFEIYPYCAMA 225
           +A ++F+R L L+    +A    A + L+  + +  +K +EK+    Q   +I+     +
Sbjct: 418 EALESFERVLSLNAAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWS 477

Query: 226 LNYLANH---FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 282
           L  L ++        Q  ++E   + +L     G    +S+Y L R   +   Y KAG +
Sbjct: 478 LQNLEDYEGAVKAYDQALVIE--PDNSLIWYQKG----NSFYQLNRINDALESYSKAGQF 531

Query: 283 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
                     P +F   +Y  G +  KLG    AL  F +  E   +  +     G +  
Sbjct: 532 ---------NP-QFSQAHYSQGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLH 581

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEV 401
           Q+ + ++A     KA +I  + A+ FI +G       D   A++A++ A    K    + 
Sbjct: 582 QMERFQEAIVSYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINAYQQAIQRQK----DN 637

Query: 402 PIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
           P E   ++G   F+ G++E A Q+++++L
Sbjct: 638 P-ETWKSLGNSCFKLGQYERAIQAYQESL 665


>gi|333997950|ref|YP_004530562.1| hypothetical protein TREPR_2517 [Treponema primitia ZAS-2]
 gi|333738980|gb|AEF84470.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
          Length = 349

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 8/302 (2%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A  YYN+A R++ +    +  +G + + KGE   A + +   +   ++   A   +  + 
Sbjct: 52  AIGYYNQAIRLNPYYAEAYNNRGVVYVIKGEYTWAMADYTEAIRLKQNYTFAYNNRGLLF 111

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
              G Y  +   +  A+ + P+   A R   G    + G+  +A   F +A++L P   +
Sbjct: 112 TEIGDYERARNDFTMAITMDPNYAKAYR-NRGEIHLRKGEYDQAILDFNQAVRLSPGYAK 170

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A  +    D  AN+     K +    +A  I P    AL    N ++  G     +   +
Sbjct: 171 AFGSRG--DAYANKGE-YDKAVADYNQAIRINPNYVEALINRGNIYYDVGYPDRAKVDYD 227

Query: 248 TALAVT-NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 306
             +++  N GP    +Y N   +Y+++GDY KA   Y  ++K +N        Y   G V
Sbjct: 228 RVISINLNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEAIK-LNP--NLALAYRHRGAV 284

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
              +G++R A+ +F + +EI P+      + G     LG+  +AQ    +A +I+ +  +
Sbjct: 285 YANIGEYRLAIDDFNRAIEINPNYATAYISRGKALSYLGEYAQAQIDYHQAVRINTKYGE 344

Query: 367 AF 368
            +
Sbjct: 345 IY 346



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 18/230 (7%)

Query: 207 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH-FLVEQLTETALAVTNHGPTKSHSYYN 265
           + +    +A  + PY A A N     +   G++ + +   TE      N+    + +Y N
Sbjct: 51  RAIGYYNQAIRLNPYYAEAYNNRGVVYVIKGEYTWAMADYTEAIRLKQNY----TFAYNN 106

Query: 266 LARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 324
               +   GDYE+A   + MA   + N    +   Y   G++ L+ G++  A+ +F + +
Sbjct: 107 RGLLFTEIGDYERARNDFTMAITMDPN----YAKAYRNRGEIHLRKGEYDQAILDFNQAV 162

Query: 325 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG--- 381
            + P   +   + G  Y   G+ +KA     +A +I+P   +A I+ G   I  D G   
Sbjct: 163 RLSPGYAKAFGSRGDAYANKGEYDKAVADYNQAIRINPNYVEALINRGN--IYYDVGYPD 220

Query: 382 -AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
            A +D +    ++   AG ++P    +N GV +  +G++  A   + +A+
Sbjct: 221 RAKVD-YDRVISINLNAGPDLP-RAYSNRGVAYNNRGDYGKAIADYNEAI 268


>gi|330509108|ref|YP_004385536.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328929916|gb|AEB69718.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 355

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 128/314 (40%), Gaps = 38/314 (12%)

Query: 81  HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-------- 132
           + P  W+ +G  L +    E+A+ AF   LE D  N+ A L ++    + G         
Sbjct: 36  NTPVAWIKRGIELSSNESYEEATQAFDRALEQDPQNLNAWLFKSMALTSLGTKIALENKN 95

Query: 133 -------------YSDSLEFYKRALQVHPSCPGAIR------LGIGLCRYKLGQLGKARQ 173
                        +  ++E ++RA+++ P               IG     L  L ++ Q
Sbjct: 96  LGIKDREASGMTAFDKAIEAHERAIEIAPENATVWTYKANNLAKIGSFTDNLSILNESLQ 155

Query: 174 AFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 229
           AF +AL+L+PE+ +A     +AL  +     + +   + +  + RA EI P  A AL   
Sbjct: 156 AFDKALELNPEDADAWHGKGIALVYISQTREDTSRYEEALRYIDRALEIDPQTAGALENK 215

Query: 230 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 289
           A      G+    ++L   AL + N       S  +L  ++ SKG   +A   Y  +VK 
Sbjct: 216 AGILSELGRQNESDKLYSEALELYNTSIETEKSTEDLVEAWLSKGFILQAQGKYEDAVKA 275

Query: 290 INKPHEFIFPYYGLGQ------VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
           +    +   P  GL        +  +L ++  A+  F+K L+I P +  T    G     
Sbjct: 276 LGNATD-ADPMNGLAWKVKGVLLWRELKEYDDAVNAFDKALQINPKDPLTWMNKGDALKA 334

Query: 344 LGQIEKAQELLRKA 357
           LG+  +A E   KA
Sbjct: 335 LGRQAEADEAYAKA 348


>gi|428315211|ref|YP_007113093.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428238891|gb|AFZ04677.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 949

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 149/346 (43%), Gaps = 37/346 (10%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN--VPALLGQAC 125
           A ++ NKA  +    PS +   G++L A+G+   A  AF   LE         A LGQ  
Sbjct: 22  AIEFCNKAIELQPFSPSAYTTLGEILEAQGDPTAARDAFVQALEISPQFFLAHAYLGQLY 81

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
            ++      +++  Y++AL + P    A+   +G   +K G L  A   +++A+   P+ 
Sbjct: 82  SDY--AWLDEAVFHYRQALDLKPDW-AAVHYNLGNVFHKQGNLLGAIDCYRKAIAQKPDY 138

Query: 186 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           ++AL  LAV+    +E + +   M+  ++A  + P    A + L       G   L E  
Sbjct: 139 LDALYNLAVV---LDENSQLEAAMDTYRQAIALKPDYVEAYSNL-------GVILLKEDR 188

Query: 246 TETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
              A+ V        P  +  + NL ++   K   E+A   Y+ +++   +P + +  +Y
Sbjct: 189 AAEAIEVYQRAIEIKPDWATLHNNLGQALLDKSP-ERAIASYLTAIEL--EP-DMVLAHY 244

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            LG+     G+  +AL  FE+ +EI  D        G   + LG+I +A     +A  + 
Sbjct: 245 NLGKAWQLQGEHSAALACFERAIEIDSDYISGYTDAGFSLMVLGKIAEAMPYFERAIALK 304

Query: 362 PRDAQAFIDLG-----------ELLISSDTGAALDAFKTARTLLKK 396
           P   +A+  LG           EL   S   AA D F TA T  KK
Sbjct: 305 PDFVEAYCRLGDRRRVAAVEDDEL---SRAIAACDRFLTALTGRKK 347



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 44/271 (16%)

Query: 123 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 182
           QA +  NRG+ ++++EF  +A+++ P  P A    +G      G    AR AF +AL++ 
Sbjct: 9   QARIYLNRGKLTEAIEFCNKAIELQPFSPSAYT-TLGEILEAQGDPTAARDAFVQALEIS 67

Query: 183 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 242
           P   +  +A A +    ++ A + + +   ++A ++ P      ++ A H          
Sbjct: 68  P---QFFLAHAYLGQLYSDYAWLDEAVFHYRQALDLKP------DWAAVH---------- 108

Query: 243 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 302
                                YNL   +H +G+   A   Y  ++ +  KP +++   Y 
Sbjct: 109 ---------------------YNLGNVFHKQGNLLGAIDCYRKAIAQ--KP-DYLDALYN 144

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           L  V  +     +A+  + + + + PD  E    LG I ++  +  +A E+ ++A +I P
Sbjct: 145 LAVVLDENSQLEAAMDTYRQAIALKPDYVEAYSNLGVILLKEDRAAEAIEVYQRAIEIKP 204

Query: 363 RDAQAFIDLGELLISSDTGAALDAFKTARTL 393
             A    +LG+ L+      A+ ++ TA  L
Sbjct: 205 DWATLHNNLGQALLDKSPERAIASYLTAIEL 235



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 95/249 (38%), Gaps = 52/249 (20%)

Query: 340 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAG 398
           IY+  G++ +A E   KA ++ P    A+  LGE+L    D  AA DAF  A  +     
Sbjct: 12  IYLNRGKLTEAIEFCNKAIELQPFSPSAYTTLGEILEAQGDPTAARDAFVQALEI----- 66

Query: 399 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 458
                              +F  AH        D  WL                      
Sbjct: 67  -----------------SPQFFLAHAYLGQLYSDYAWL---------------------- 87

Query: 459 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 518
           D  +FH  +     ++L  +   V +NL  +  +  + + A   YR  + +  DY+DA  
Sbjct: 88  DEAVFHYRQA----LDLKPDWAAVHYNLGNVFHKQGNLLGAIDCYRKAIAQKPDYLDALY 143

Query: 519 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 578
            LA +    + L+ +++   +A+ +   Y  A S LG + LK D   +A E       A 
Sbjct: 144 NLAVVLDENSQLEAAMDTYRQAIALKPDYVEAYSNLGVILLKED---RAAEAIEVYQRAI 200

Query: 579 DGKDSYATL 587
           + K  +ATL
Sbjct: 201 EIKPDWATL 209


>gi|301094298|ref|XP_002896255.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
 gi|262109650|gb|EEY67702.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
          Length = 977

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 133/309 (43%), Gaps = 12/309 (3%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q+Y +A +++      +       +  G+ E+A   +K+ +  D   V A      + 
Sbjct: 123 AVQFYVRAIKLNPRFGDAYNNLANCYMLLGQTEEAVETYKMAIMLDPRLVDAHSNLGNLY 182

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
             +GR  D+   Y +A++V PS   A     GL +   GQL  A + ++ A++L P+  +
Sbjct: 183 KVQGRLVDAKHCYAQAIRVKPSFAIAWSNLAGLLKDD-GQLDAAVEHYREAIRLAPDFAD 241

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           A   L        E+  + + ++  + A +I P  A+A   LA+ ++  GQ  L      
Sbjct: 242 AYSNLGN---ALKESGRVDEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMELAIHTFR 298

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQV 306
            A+ +    P    +Y NL  +    G  E+A   Y  +++ + + PH     Y  LG  
Sbjct: 299 HAIQLE---PNFPDAYNNLGNALRECGHLEQAVTCYRTALQLKPDHPHA----YNNLGNA 351

Query: 307 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 366
               G  + AL  +     + P        +G +  + G++++A    ++A  IDP  A 
Sbjct: 352 LKDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNFAD 411

Query: 367 AFIDLGELL 375
           A+ ++G + 
Sbjct: 412 AYSNMGNVF 420



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 180/442 (40%), Gaps = 79/442 (17%)

Query: 121 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 180
           LG A  E   G  + +++FY RA++++P    A    +  C   LGQ  +A + ++ A+ 
Sbjct: 110 LGNALKEL--GDVAGAVQFYVRAIKLNPRFGDAYN-NLANCYMLLGQTEEAVETYKMAIM 166

Query: 181 LDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 239
           LDP  V+A   L  +  +Q      +        +A  + P  A+A + LA      GQ 
Sbjct: 167 LDPRLVDAHSNLGNLYKVQGR----LVDAKHCYAQAIRVKPSFAIAWSNLAGLLKDDGQ- 221

Query: 240 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF- 298
             ++   E         P  + +Y NL  +    G  ++A   Y ++++   +P+  I  
Sbjct: 222 --LDAAVEHYREAIRLAPDFADAYSNLGNALKESGRVDEAIQAYKSALQI--RPNFAIAH 277

Query: 299 -----PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 353
                 YY  GQ++L +  FR A       +++ P+  +    LG+   + G +E+A   
Sbjct: 278 GNLASCYYDAGQMELAIHTFRHA-------IQLEPNFPDAYNNLGNALRECGHLEQAVTC 330

Query: 354 LRKAAKIDPRDAQAFIDLGELLISSDTGA---ALDAFKTARTLLKKAGEEVPIEVLNNIG 410
            R A ++ P    A+ +LG  L   D G    AL  + TA  LL +          +NIG
Sbjct: 331 YRTALQLKPDHPHAYNNLGNAL--KDKGLVKEALHCYTTAARLLPQFA-----AAHSNIG 383

Query: 411 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 470
            +  E+G+ + A   ++ A+                 ID +     F D      + N G
Sbjct: 384 SVLKEQGKLDQALAHYQQAI----------------TIDPN-----FADA-----YSNMG 417

Query: 471 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 530
           N          V  +L RL E I     A      I  K Q + DAY  LA+  K    L
Sbjct: 418 N----------VFKDLCRLEEAIQCYSTA------IRLKPQ-FPDAYSNLASAYKDGGRL 460

Query: 531 QLSIELVNEALKVNGKYPNALS 552
             +I    +AL +  ++P+A +
Sbjct: 461 DDAITCYRKALALRPQFPDAFA 482



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 132/330 (40%), Gaps = 52/330 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQAC 125
           A   Y +A R+       W     LL   G+++ A   ++  I L  D  +  + LG A 
Sbjct: 191 AKHCYAQAIRVKPSFAIAWSNLAGLLKDDGQLDAAVEHYREAIRLAPDFADAYSNLGNAL 250

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-IGLCRYKLGQLGKARQAFQRALQLDPE 184
            E   GR  ++++ YK ALQ+ P+   AI  G +  C Y  GQ+  A   F+ A+QL+P 
Sbjct: 251 KE--SGRVDEAIQAYKSALQIRPNF--AIAHGNLASCYYDAGQMELAIHTFRHAIQLEPN 306

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
             +A           N      +    +++A   Y                         
Sbjct: 307 FPDAY----------NNLGNALRECGHLEQAVTCY------------------------- 331

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
              TAL +    P   H+Y NL  +   KG  ++A   Y  + + +    +F   +  +G
Sbjct: 332 --RTALQLK---PDHPHAYNNLGNALKDKGLVKEALHCYTTAARLLP---QFAAAHSNIG 383

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
            V  + G    AL ++++ + I P+  +    +G+++  L ++E+A +    A ++ P+ 
Sbjct: 384 SVLKEQGKLDQALAHYQQAITIDPNFADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQF 443

Query: 365 AQAFIDLGELLISSDTGAALDAFKTARTLL 394
             A+ +L       D G   DA    R  L
Sbjct: 444 PDAYSNLASAY--KDGGRLDDAITCYRKAL 471



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 144/396 (36%), Gaps = 70/396 (17%)

Query: 303 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 362
           LG +  +LG+   ++   ++ + + PD  E    LG+   +LG +  A +   +A K++P
Sbjct: 76  LGALHFQLGNLSESIFYNQQCIRVAPDFAEAYGNLGNALKELGDVAGAVQFYVRAIKLNP 135

Query: 363 RDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 421
           R   A+ +L    ++   T  A++ +K A  L  +      ++  +N+G ++  +G    
Sbjct: 136 RFGDAYNNLANCYMLLGQTEEAVETYKMAIMLDPRL-----VDAHSNLGNLYKVQGRLVD 190

Query: 422 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 481
           A   +  A+           + K                              + W+   
Sbjct: 191 AKHCYAQAI-----------RVKP--------------------------SFAIAWS--- 210

Query: 482 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 541
              NLA LL+      AA   YR  +    D+ DAY  L    K    +  +I+    AL
Sbjct: 211 ---NLAGLLKDDGQLDAAVEHYREAIRLAPDFADAYSNLGNALKESGRVDEAIQAYKSAL 267

Query: 542 KVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA-TDGKDSYATLSLGNWNYFAALRN 600
           ++   +  A   L            A  TFR A     +  D+Y   +LGN     ALR 
Sbjct: 268 QIRPNFAIAHGNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYN--NLGN-----ALR- 319

Query: 601 EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 660
                  E  HLE+A   Y   +     + +A N  G  L +KG    +   +T      
Sbjct: 320 -------ECGHLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEALHCYT-----T 367

Query: 661 SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 696
           +  +  Q      N+  V   QG    A+  YQ  +
Sbjct: 368 AARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAI 403



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 10/203 (4%)

Query: 231 NHFFFTGQHFLVEQLTETAL---AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 287
           N       HF +  L+E+           P  + +Y NL  +    GD   A  +Y+ ++
Sbjct: 72  NLLLLGALHFQLGNLSESIFYNQQCIRVAPDFAEAYGNLGNALKELGDVAGAVQFYVRAI 131

Query: 288 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 347
           K +N    F   Y  L    + LG    A+  ++  + + P   +    LG++Y   G++
Sbjct: 132 K-LNP--RFGDAYNNLANCYMLLGQTEEAVETYKMAIMLDPRLVDAHSNLGNLYKVQGRL 188

Query: 348 EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN 407
             A+    +A ++ P  A A+ +L  LL   D G    A +  R  ++ A +    +  +
Sbjct: 189 VDAKHCYAQAIRVKPSFAIAWSNLAGLL--KDDGQLDAAVEHYREAIRLAPDFA--DAYS 244

Query: 408 NIGVIHFEKGEFESAHQSFKDAL 430
           N+G    E G  + A Q++K AL
Sbjct: 245 NLGNALKESGRVDEAIQAYKSAL 267



 Score = 39.7 bits (91), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 113/303 (37%), Gaps = 48/303 (15%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A ++Y +A R+       +   G  L   G V++A  A+K  L+   +   A    A   
Sbjct: 225 AVEHYREAIRLAPDFADAYSNLGNALKESGRVDEAIQAYKSALQIRPNFAIAHGNLASCY 284

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           ++ G+   ++  ++ A+Q+ P+ P A    +G    + G L +A   ++ ALQL P++  
Sbjct: 285 YDAGQMELAIHTFRHAIQLEPNFPDAYN-NLGNALRECGHLEQAVTCYRTALQLKPDHPH 343

Query: 188 ALVAL--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 245
           A   L  A+ D          KG+ K                  A H + T    L    
Sbjct: 344 AYNNLGNALKD----------KGLVKE-----------------ALHCYTTAARLL---- 372

Query: 246 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 305
                      P  + ++ N+      +G  ++A  +Y    + I     F   Y  +G 
Sbjct: 373 -----------PQFAAAHSNIGSVLKEQGKLDQALAHYQ---QAITIDPNFADAYSNMGN 418

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
           V   L     A+  +   + + P   +    L   Y   G+++ A    RKA  + P+  
Sbjct: 419 VFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITCYRKALALRPQFP 478

Query: 366 QAF 368
            AF
Sbjct: 479 DAF 481


>gi|73667569|ref|YP_303584.1| hypothetical protein Mbar_A0011 [Methanosarcina barkeri str.
           Fusaro]
 gi|72394731|gb|AAZ69004.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 1138

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 140/366 (38%), Gaps = 54/366 (14%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A   Y+    I+      W  KG +L      E+A   ++  L+ D  +  AL G A   
Sbjct: 671 ALNSYDMVLAINPARAEAWYEKGSILDRLDRSEEALECYRKALDLDPQSSTALYGIASTT 730

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
            + G+  +++ +Y + L ++ S   A+ LG GL    L +  +A   + + L  +PEN+E
Sbjct: 731 GDLGKLEEAVSYYDQLLTLNSSNSDAL-LGKGLALSNLSRYDEAISCYTKLLNSEPENLE 789

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
           AL + A    ++N++      +    R  ++ P          N      +  L+E L  
Sbjct: 790 ALRSRAFALSKSNKS---NDALADYDRIIKLQP---------ENSQILAEKASLLEAL-- 835

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY--MASVKEINKPHEFIFPYYGLGQ 305
                                     G YE+    Y  M  +   N+  E I   Y  G+
Sbjct: 836 --------------------------GRYEETAACYERMLEISPNNR--EII---YKQGK 864

Query: 306 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 365
                GDF  A+  ++++LE+ P N       G +  +L + ++A +   KA +  P + 
Sbjct: 865 ALENSGDFEGAVGCYDRILELDPGNVGAYNNKGFVLYKLEKYQQAIDCYDKALEYSPDNV 924

Query: 366 QAFIDLG-ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 424
            A+   G   L  S   AAL+ F     L         I    N G IH   GE E A  
Sbjct: 925 TAWYFQGCTYLTLSSNKAALNCFNKTVQLKPDC-----ITAWYNKGYIHNMMGETEEAVS 979

Query: 425 SFKDAL 430
            + + L
Sbjct: 980 CYDNVL 985



 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 126/339 (37%), Gaps = 47/339 (13%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           +K E +  A + Y+K    +      W  KG  L   G  E+A   +   L+ D      
Sbjct: 421 DKLEKYESAIECYDKVLETESGHAVVWYLKGLDLERLGRYEEAIECYGRALKLDS----- 475

Query: 120 LLGQACVEFNRG-------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 172
             G A V + +G        Y D++E Y +AL++  +       G      KLG+   + 
Sbjct: 476 --GYAKVWYRKGLDSSKIKDYKDAVESYDKALEIDENYT-LTWAGKAFALAKLGEYESSL 532

Query: 173 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 232
             + + L   P +    VA     L  +E     +  E   +   I P  + A   L  +
Sbjct: 533 TCYNKVLGAVPSSA---VAWYNKGLVLDELGKHAEASECYNQTLLIDPEYSAARFKLNKN 589

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
                   L+ +  +   A  N     S  ++    +Y              AS ++ ++
Sbjct: 590 MKQDSTEALISEHVKNNSADANPAQMLSGGFWAYLLNYE------------YASSEDRDE 637

Query: 293 PHE---FIFP-------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 342
           P E      P       +YG   +  KLG +  AL +++ VL I P   E     G I  
Sbjct: 638 PSEDLNLFSPDISYDAAWYGKASIYGKLGMYDDALNSYDMVLAINPARAEAWYEKGSILD 697

Query: 343 QLGQIEKAQELLRKAAKIDPRDAQAFI-------DLGEL 374
           +L + E+A E  RKA  +DP+ + A         DLG+L
Sbjct: 698 RLDRSEEALECYRKALDLDPQSSTALYGIASTTGDLGKL 736



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 20/200 (10%)

Query: 36   ERIAILNALGVY------YTYLGKIETKQRE----------KEEHFILATQYYNKASRID 79
            E+ ++L ALG Y      Y  + +I    RE              F  A   Y++   +D
Sbjct: 827  EKASLLEALGRYEETAACYERMLEISPNNREIIYKQGKALENSGDFEGAVGCYDRILELD 886

Query: 80   MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEF 139
                  +  KG +L    + +QA   +   LE   DNV A   Q C          +L  
Sbjct: 887  PGNVGAYNNKGFVLYKLEKYQQAIDCYDKALEYSPDNVTAWYFQGCTYLTLSSNKAALNC 946

Query: 140  YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA--LAVMDL 197
            + + +Q+ P C  A     G     +G+  +A   +   L + P +  AL     A+  L
Sbjct: 947  FNKTVQLKPDCITA-WYNKGYIHNMMGETEEAVSCYDNVLAISPNSPSALYNKRFALYTL 1005

Query: 198  QA-NEAAGIRKGMEKMQRAF 216
            +  +EAA  +  ++++   F
Sbjct: 1006 KKLDEAAACKAKLDEIDPGF 1025



 Score = 40.0 bits (92), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 120/311 (38%), Gaps = 44/311 (14%)

Query: 65  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 124
           + L+   YN A +ID +    W GKG  L   G+ +QA + ++  L     +      + 
Sbjct: 86  YQLSVNCYNDALKIDPNSSLAWYGKGCSLAELGKNDQAVNCYEKALSTFPVSPENWYNKG 145

Query: 125 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 184
                   Y +++ FY ++   +                 L  +   +      L LD E
Sbjct: 146 NKHLELNNYVEAINFYDKSFAANT---------------YLSTVWYRKALASEQLGLDQE 190

Query: 185 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 244
           ++ +    ++     + ++   +GM  +    E YP    A+ YL               
Sbjct: 191 SLNSYDK-SIELNSNSSSSLQMQGMAYL--GLEKYP---EAIEYL--------------- 229

Query: 245 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 304
             ++AL +T   P  +   Y         GDYE A   Y    K I+   + +  ++  G
Sbjct: 230 --DSALNIT---PDNAELLYQKGVVLDKSGDYETAIDCYD---KAISFNPDLVNAWHNKG 281

Query: 305 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 364
               K+G +  ALT +E VL   P+N + L+  G    +LG+ ++A +   +    DP  
Sbjct: 282 VNLEKMGIYDEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCYDEVLVYDPGS 341

Query: 365 AQAFIDLGELL 375
           ++A+   G LL
Sbjct: 342 SEAWYSKGSLL 352


>gi|118095504|ref|XP_413706.2| PREDICTED: Bardet-Biedl syndrome 4 protein [Gallus gallus]
          Length = 532

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 20/227 (8%)

Query: 211 KMQRAFEIYPYCAMA-------LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 263
           K+Q + E++  C++        L  +A   F  G+H    ++   A  +       SH  
Sbjct: 82  KIQESLELFQTCSILNPRSADNLKQVARSLFLLGKHKAAIEVYNEAAKLDEKDWEISH-- 139

Query: 264 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 323
            NL   Y     + KA    + +  E+N+ H+    Y  LG++ L  G+   A+  ++K 
Sbjct: 140 -NLGVCYMYLKHFNKAR-DQLNNALEMNR-HDLT--YMMLGKIHLLEGETEKAIEVYKKA 194

Query: 324 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGA 382
           +E  P+N + L  LG IY+QLG  +KA E L KA   D  + +A +  G ++ +  D   
Sbjct: 195 VEFSPENTDLLTKLGLIYLQLGDYQKAFEHLGKALTYDQGNYKATLAAGSMMQAHGDYDV 254

Query: 383 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 429
           AL  +   R ++    E  P+   NNIG+  F K ++ +A    K A
Sbjct: 255 ALSKY---RAVVSSMPESPPL--WNNIGMCFFGKKKYVAAISCLKRA 296



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 134/341 (39%), Gaps = 55/341 (16%)

Query: 516 AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS 575
            Y+ L    KAR+ L       N AL++N ++     MLG + L   +  KA E ++ A 
Sbjct: 144 CYMYLKHFNKARDQL-------NNALEMN-RHDLTYMMLGKIHLLEGETEKAIEVYKKAV 195

Query: 576 D-ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAAN 634
           + + +  D    L L                 L+    +KA E   + +     N  A  
Sbjct: 196 EFSPENTDLLTKLGL---------------IYLQLGDYQKAFEHLGKALTYDQGNYKATL 240

Query: 635 GAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQN 694
            AG ++   G +DV+   +  V      S   + P +W N+   +F +  +  A+    +
Sbjct: 241 AAGSMMQAHGDYDVALSKYRAVV-----SSMPESPPLWNNIGMCFFGKKKYVAAI----S 291

Query: 695 CLRKFYY--NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 752
           CL++  Y    D +IL  L   H   +Q+      L  AI+  P    L     VA+   
Sbjct: 292 CLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNL 351

Query: 753 SASTLQKTRRTADEVRS-----TVAELENAVRVFSHLSAASNLHLHGFDEKKI-----NT 802
               ++  +R+ ++  +      +  L  AV +++H      L  +   EKK+     N+
Sbjct: 352 --EDIENAKRSYEQAVALDKCNPLVNLNYAVLLYNHGDKKGALCQYQEMEKKVTALKENS 409

Query: 803 HVEYCKHLLDAAKIHREAAEREEQQ--------NRQRQEAA 835
            +++   +++ A+    A +  E Q        +R +Q AA
Sbjct: 410 TLDFDPEMVEVAQKMGTALQVGESQVWTKPAKESRSKQRAA 450


>gi|386002402|ref|YP_005920701.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
 gi|357210458|gb|AET65078.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
          Length = 1348

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 17/331 (5%)

Query: 67  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 126
           LA   Y++A R++  + ++W+ KG  L   G+ ++A  A    +  D +NV A   +   
Sbjct: 214 LAIYAYDEAIRLNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVA 273

Query: 127 EFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
             ++G+Y ++++ Y  A+++ P    A  R G  L     G+  +A QA   A+ LDPEN
Sbjct: 274 LNSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQ--GKYDEAIQASNEAISLDPEN 331

Query: 186 VEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 243
                +  +A+ +   ++ A     ++    A  + P  A A N         G++   +
Sbjct: 332 ANGWNIKGVALYNRGKSDEA-----IKAYDEAIRLSPEYADAWNNKGLSLKSQGKY---D 383

Query: 244 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 303
           +  +T        P    ++YN   + +++G Y++A     A  + I    E++  +Y  
Sbjct: 384 EAIQTFNETIRLDPEHVAAWYNKGLTLNNQGKYDEA---IQAFDEAIRLNPEYVDAWYSK 440

Query: 304 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 363
           G        +  A+  +++V+++ P+  +   + G  +   G+  +A +   +A + +P 
Sbjct: 441 GNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPE 500

Query: 364 DAQAFIDLGELLISSDT-GAALDAFKTARTL 393
            A A+ + G  L+S D    A+ AF  A  L
Sbjct: 501 YADAWNNKGVALVSLDKYEEAIQAFDEATRL 531



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/363 (19%), Positives = 148/363 (40%), Gaps = 48/363 (13%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q Y +A R+D      W  KG     +G+ ++A  A+   +  D +   A   +    
Sbjct: 79  AIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNEAIRLDPEYANAWHNKGYAL 138

Query: 128 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 187
           + +G+Y ++++ Y  A++++P    A     G   Y  G   +A +A+  A++LDPE   
Sbjct: 139 YLQGKYDEAIKAYNEAIRLYPEYANAWN-SKGYALYSQGNYDEAIKAYNEAIRLDPEF-- 195

Query: 188 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 247
                                         ++P+         +  F  G++ L     +
Sbjct: 196 ------------------------------MWPWRNK-----GDTLFSQGKYELAIYAYD 220

Query: 248 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 307
            A+ +    P   +S+ N   + +  G Y++A     AS + I    E ++ ++  G   
Sbjct: 221 EAIRLN---PEDLNSWINKGAALYRLGKYDEA---IRASNEAIRLDPENVYAWHNKGVAL 274

Query: 308 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 367
              G +  A+  +++ + + P+  +     G   +  G+ ++A +   +A  +DP +A  
Sbjct: 275 NSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANG 334

Query: 368 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 427
           +   G  L   + G + +A K     ++ + E    +  NN G+    +G+++ A Q+F 
Sbjct: 335 WNIKGVALY--NRGKSDEAIKAYDEAIRLSPEYA--DAWNNKGLSLKSQGKYDEAIQTFN 390

Query: 428 DAL 430
           + +
Sbjct: 391 ETI 393



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 90/438 (20%), Positives = 170/438 (38%), Gaps = 82/438 (18%)

Query: 60  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 119
           EK+  +  A + YN+A R+D    + W  KG  L  +G+ ++A  A+   +    +   A
Sbjct: 105 EKQGKYDEAIKAYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANA 164

Query: 120 LLGQACVEFNRGRYSDSLEFYKRALQVHPS--CPG----------------------AIR 155
              +    +++G Y ++++ Y  A+++ P    P                       AIR
Sbjct: 165 WNSKGYALYSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIR 224

Query: 156 LGI---------GLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQANEA 202
           L           G   Y+LG+  +A +A   A++LDPENV A     VAL       N  
Sbjct: 225 LNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVAL-------NSQ 277

Query: 203 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL------------ 250
               + ++    A  + P  A A N         G++    Q +  A+            
Sbjct: 278 GKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNI 337

Query: 251 ---AVTNHG----------------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
              A+ N G                P  + ++ N   S  S+G Y++A   +  +++ ++
Sbjct: 338 KGVALYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIR-LD 396

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
             H  +  +Y  G      G +  A+  F++ + + P+  +   + G+      + ++A 
Sbjct: 397 PEH--VAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAI 454

Query: 352 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV 411
           +   +  K++P  A A+   G    S   G   +A K     +++  E    +  NN GV
Sbjct: 455 QAYDEVIKLNPEYADAWNSKGTAFNSQ--GRYNEAIKAFDEAIRRNPEYA--DAWNNKGV 510

Query: 412 IHFEKGEFESAHQSFKDA 429
                 ++E A Q+F +A
Sbjct: 511 ALVSLDKYEEAIQAFDEA 528



 Score = 40.8 bits (94), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 15/135 (11%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 127
           A Q +++A+R++  +   W+ KG      G+ ++      + ++A  D++      A   
Sbjct: 521 AIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDLRWNPEDANAR 580

Query: 128 FNRG--------------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 173
            ++G              +Y D+++ Y  A+ ++P    A     G   Y LG+  +A Q
Sbjct: 581 LSKGIALMLKGLALETLDKYEDAVQAYDEAISLNPDDVAAWE-NRGAALYSLGKYDEAVQ 639

Query: 174 AFQRALQLDPENVEA 188
           A+   L+L+PE+  A
Sbjct: 640 AYDEVLRLNPEDANA 654



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 5/137 (3%)

Query: 52  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE 111
           G I  +Q E  E    A Q +N+A  ++      W  KG+ L  +G+  +A  A  + + 
Sbjct: 755 GIILGEQHEYNE----AMQAFNEAVSLNPAGSFIWSFKGKYLNDQGKYYEAIEAIDMAIS 810

Query: 112 ADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKA 171
            + ++  A   +      +G++ +++  Y  A++++P    A     GL  Y  G   +A
Sbjct: 811 LNPESALAWNYKGAALRGQGKHEEAILAYDEAIRLNPDDEDAWN-NKGLALYSQGNYSEA 869

Query: 172 RQAFQRALQLDPENVEA 188
            QA+ RA+ L+ + V+A
Sbjct: 870 IQAYDRAIDLNSQLVQA 886


>gi|451982186|ref|ZP_21930513.1| exported hypothetical protein, contains TPR repeats [Nitrospina
           gracilis 3/211]
 gi|451760606|emb|CCQ91795.1| exported hypothetical protein, contains TPR repeats [Nitrospina
           gracilis 3/211]
          Length = 755

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 141/326 (43%), Gaps = 50/326 (15%)

Query: 106 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 165
           ++  L+ D ++  A  G        G Y  ++  +K+ L+V P   GA    IG    +L
Sbjct: 42  YRDALKVDPNDYIAHFGLGRAYAQIGLYDKAIAEFKKVLEVEPLYSGAY-YQIGEAHSQL 100

Query: 166 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 225
           G   +A +AF+ A+ LDP   +A   L   +L+          ++K + A E        
Sbjct: 101 GHTKEAAEAFREAVLLDPNFADAQFGLGYANLE----------LKKYEEALE-------- 142

Query: 226 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 285
             +L N                      N G  ++H  + L R+Y     + +A   Y+ 
Sbjct: 143 --HLTNSL------------------RINPGMPRAH--FALGRTYAETDRHTEAIPEYLI 180

Query: 286 SVKEINKPH-EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 344
           ++ E++  H E+ F    L +    L  F SA++ +++ L++  +  +   A+G I V  
Sbjct: 181 AL-ELSPLHPEWRF---ALAKSMEALSQFDSAISQYKQTLDLNSNFADAYAAIGRIRVAT 236

Query: 345 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 404
           GQ++KA E L  A +IDP++A A   LG  L  S  G   +A    + L     ++    
Sbjct: 237 GQLKKALEPLENALRIDPQNALALEYLGRAL--SRMGKHREAMLAFKELTFVQPQQAKSH 294

Query: 405 VLNNIGVIHFEKGEFESAHQSFKDAL 430
               +G  + E G+  +A +SF++AL
Sbjct: 295 Y--QLGREYLELGQLVNARESFENAL 318



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 112/499 (22%), Positives = 177/499 (35%), Gaps = 162/499 (32%)

Query: 66  ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA------------- 112
            L  Q Y  A ++D ++     G G+     G  ++A + FK VLE              
Sbjct: 36  FLHMQEYRDALKVDPNDYIAHFGLGRAYAQIGLYDKAIAEFKKVLEVEPLYSGAYYQIGE 95

Query: 113 ---------------------DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 151
                                D +   A  G         +Y ++LE    +L+++P  P
Sbjct: 96  AHSQLGHTKEAAEAFREAVLLDPNFADAQFGLGYANLELKKYEEALEHLTNSLRINPGMP 155

Query: 152 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA------------------ 193
            A    +G    +  +  +A   +  AL+L P + E   ALA                  
Sbjct: 156 RA-HFALGRTYAETDRHTEAIPEYLIALELSPLHPEWRFALAKSMEALSQFDSAISQYKQ 214

Query: 194 VMDLQANEA-------------AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 240
            +DL +N A               ++K +E ++ A  I P  A+AL YL       G+H 
Sbjct: 215 TLDLNSNFADAYAAIGRIRVATGQLKKALEPLENALRIDPQNALALEYLGRALSRMGKH- 273

Query: 241 LVEQLTETALA---VTNHGPTKSHSYYNLARSY--------------------------- 270
                 E  LA   +T   P ++ S+Y L R Y                           
Sbjct: 274 -----REAMLAFKELTFVQPQQAKSHYQLGREYLELGQLVNARESFENALRFDSNNLDIR 328

Query: 271 -------HSKGDYEKAGLYYMASVKEINKPH----------------------EF----- 296
                   + G  EKA + YM  V  +N  H                      EF     
Sbjct: 329 FHLGQTLENLGQMEKAIVEYM-RVLNLNPKHVRAHHRIADLSLLQENYHRAAEEFENVLR 387

Query: 297 IFPYYGLGQVQL-----KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
           + P  G  Q++L     +L  ++ A++ ++K L  +PD+ E  ++LG+   QLG    A 
Sbjct: 388 LDPENGPVQLKLARAYEELNRWQDAISAYQKSLRFFPDSVEIWQSLGNTQWQLGNYRAAI 447

Query: 352 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA---GEEVPIE---- 404
             LR+  + DP  +QA++ LG+ L+       LD  K A    KKA     E+P      
Sbjct: 448 VPLRETLRRDPGRSQAWMFLGDALMQ------LDQLKKAVIPFKKALQLNPELPQADFGL 501

Query: 405 --VLNNIG-----VIHFEK 416
             +L  +G     VIH E+
Sbjct: 502 GIILTRLGRHEQAVIHLER 520



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 23/330 (6%)

Query: 68  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 125
           A   Y K+ R        W   G      G    A    +  L  D  R      LG A 
Sbjct: 412 AISAYQKSLRFFPDSVEIWQSLGNTQWQLGNYRAAIVPLRETLRRDPGRSQAWMFLGDAL 471

Query: 126 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 185
           ++ ++     ++  +K+ALQ++P  P A   G+G+   +LG+  +A    +R +  +P+N
Sbjct: 472 MQLDQ--LKKAVIPFKKALQLNPELPQA-DFGLGIILTRLGRHEQAVIHLERTVARNPDN 528

Query: 186 VEALVAL--AVMDLQ--ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 241
            +A   L  + ++L+  A     +R  M  + R  +        L  L + ++   Q+ +
Sbjct: 529 FQAQAMLGDSYLELERYAEAVPALRAAMGDVTRRQQ-------TLLKLGSAYWHLRQYQM 581

Query: 242 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 301
             +    ++ +    P     Y  L   Y   G  +KA   Y  +++  +   ++  P +
Sbjct: 582 ALKAYHQSVQLD---PENYRIYNQLGVIYSEIGQPDKAIHAYSEAIRLKS---DYFEPRF 635

Query: 302 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 361
            LG +   LG +  ALT+ +  L +  +N     + G + +QL +  +A    ++AA+ D
Sbjct: 636 NLGVLYDLLGRYPDALTSLDGALRVDAENPSAHFSRGWVLLQLKRYREAVWAFQQAARYD 695

Query: 362 PRDAQAFIDLGELLISSD-TGAALDAFKTA 390
           P +A A  +LG    ++   G A  AF+ A
Sbjct: 696 PSNADAHFNLGVAFAAAHRRGEARSAFRMA 725



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 16/173 (9%)

Query: 36  ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI--DMHEPSTWVGKGQLL 93
           E   I N LGV Y+ +G+ +            A   Y++A R+  D  EP   +G    L
Sbjct: 595 ENYRIYNQLGVIYSEIGQPDK-----------AIHAYSEAIRLKSDYFEPRFNLGVLYDL 643

Query: 94  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 153
           L  G    A ++    L  D +N  A   +  V     RY +++  +++A +  PS   A
Sbjct: 644 L--GRYPDALTSLDGALRVDAENPSAHFSRGWVLLQLKRYREAVWAFQQAARYDPSNADA 701

Query: 154 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 206
               +G+      + G+AR AF+ AL++DP++  AL  LA ++ +  +   ++
Sbjct: 702 -HFNLGVAFAAAHRRGEARSAFRMALRIDPDHTGALTRLAELETRTGKTGPLK 753


>gi|390344140|ref|XP_784504.3| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Strongylocentrotus purpuratus]
          Length = 1041

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 134/332 (40%), Gaps = 48/332 (14%)

Query: 44  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 103
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 180 FAVAWSNLGCVFNSQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 235

Query: 104 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 163
            A+   L+   ++       ACV + +G    +++ YKRA+++ P  P A    +     
Sbjct: 236 GAYLRALQLSPNHAVVHGNLACVYYEQGLIDLAIDTYKRAIELQPHFPDA-YCNLANALK 294

Query: 164 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           + G++ +A   +  AL+L P + ++L  LA +     E   +   ++   +A EI+P  A
Sbjct: 295 EQGKVAEAEDCYNTALRLCPTHADSLNNLANIK---REQGNVEGSIQLYCKALEIFPEFA 351

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A                                   HS  NLA     +G  ++A L+Y
Sbjct: 352 AA-----------------------------------HS--NLASVLQQQGKLQEALLHY 374

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
             +++    P  F   Y  +G    ++ D + AL  + + ++I P   +    L  ++  
Sbjct: 375 KEAIRI--SP-TFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASVHKD 431

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 375
            G I +A E  R A K+ P    A+ +L   L
Sbjct: 432 SGNIPEAIESYRTALKLKPNFPDAYCNLAHCL 463



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 139/343 (40%), Gaps = 52/343 (15%)

Query: 90  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 149
           G LL A G +++A + +   +E   +   A     CV  ++G    ++  +++A+ + P+
Sbjct: 154 GNLLKALGRLDEAKACYLKAIETQPNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPN 213

Query: 150 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 208
              A I LG  L   ++    +A  A+ RALQL P +      LA +     E   I   
Sbjct: 214 FLDAYINLGNVLKEARI--FDRAVGAYLRALQLSPNHAVVHGNLACVYY---EQGLIDLA 268

Query: 209 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 268
           ++  +RA E+ P+   A   LAN     G+    E    TAL +    PT + S  NLA 
Sbjct: 269 IDTYKRAIELQPHFPDAYCNLANALKEQGKVAEAEDCYNTALRLC---PTHADSLNNLAN 325

Query: 269 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 328
               +G+ E                          G +QL           + K LEI+P
Sbjct: 326 IKREQGNVE--------------------------GSIQL-----------YCKALEIFP 348

Query: 329 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAF 387
           +       L  +  Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +
Sbjct: 349 EFAAAHSNLASVLQQQGKLQEALLHYKEAIRISPTFADAYSNMGNTLKEMQDIQGALQCY 408

Query: 388 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             A  +          +  +N+  +H + G    A +S++ AL
Sbjct: 409 TRAIQI-----NPAFADAHSNLASVHKDSGNIPEAIESYRTAL 446



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 104/475 (21%), Positives = 191/475 (40%), Gaps = 35/475 (7%)

Query: 97  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 156
           G+ E A      +   + +N   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDYENAEKHCMQLWRQEPENTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 157 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 216
            +G    + GQL +A + ++ A++L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVFKEKGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAADMEG---AVQAYVTAL 140

Query: 217 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
           +  P  YC  +   L N     G+   +++     L      P  + ++ NL   ++S+G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LDEAKACYLKAIETQPNFAVAWSNLGCVFNSQG 195

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L++ P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVGAYLRALQLSPNHAVVH 252

Query: 335 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 393
             L  +Y + G I+ A +  ++A ++ P    A+ +L   L      A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANALKEQGKVAEAEDCYNTALRL 312

Query: 394 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 453
                +      LNN+  I  E+G  E + Q +  AL   I+     + +        AS
Sbjct: 313 CPTHADS-----LNNLANIKREQGNVEGSIQLYCKALE--IFPEFAAAHSNL------AS 359

Query: 454 MLQFKDM---QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 510
           +LQ +      L H  E     + +         N+   L+++ D   A   Y   +   
Sbjct: 360 VLQQQGKLQEALLHYKEA----IRISPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQIN 415

Query: 511 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 565
             + DA+  LA++ K   N+  +IE    ALK+   +P+A   L        DW 
Sbjct: 416 PAFADAHSNLASVHKDSGNIPEAIESYRTALKLKPNFPDAYCNLAHCLQIVCDWT 470



 Score = 43.1 bits (100), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 159/400 (39%), Gaps = 39/400 (9%)

Query: 167 QLGKARQAFQRALQL---DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
           Q G    A +  +QL   +PEN   L+ L+ +  Q      + +       A +  P  A
Sbjct: 23  QAGDYENAEKHCMQLWRQEPENTGVLLLLSSIHFQCRR---LDRSAHFSTLAIKQNPMLA 79

Query: 224 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 283
            A + L N F   GQ   +++  E         P     Y NLA +  +  D E A   Y
Sbjct: 80  EAYSNLGNVFKEKGQ---LQEALENYRHAVRLKPDFIDGYINLAAALVAAADMEGAVQAY 136

Query: 284 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 343
           + +++    P  +      LG +   LG    A   + K +E  P+       LG ++  
Sbjct: 137 VTALQY--NPDLYCV-RSDLGNLLKALGRLDEAKACYLKAIETQPNFAVAWSNLGCVFNS 193

Query: 344 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-----ISSDTGAALDAFKTARTLLKKAG 398
            G+I  A     KA  +DP    A+I+LG +L          GA L A + +       G
Sbjct: 194 QGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVGAYLRALQLSPNHAVVHG 253

Query: 399 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ-F 457
                    N+  +++E+G  + A  ++K A+           + + +  DA  ++    
Sbjct: 254 ---------NLACVYYEQGLIDLAIDTYKRAI-----------ELQPHFPDAYCNLANAL 293

Query: 458 KDMQLFHRFENDGNH-VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 516
           K+       E+  N  + L       L NLA +  +  +   +  LY   L  + ++  A
Sbjct: 294 KEQGKVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNVEGSIQLYCKALEIFPEFAAA 353

Query: 517 YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 556
           +  LA++ + +  LQ ++    EA++++  + +A S +G+
Sbjct: 354 HSNLASVLQQQGKLQEALLHYKEAIRISPTFADAYSNMGN 393


>gi|85858278|ref|YP_460480.1| hypothetical protein SYN_01095 [Syntrophus aciditrophicus SB]
 gi|85721369|gb|ABC76312.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
          Length = 649

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 17/230 (7%)

Query: 233 FFFTGQHFLVEQLTETALAVTNHGPT-KSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 291
            F  G  FL+      +LAV   GP  K   ++N  +S + KG++ KAGL +  +++   
Sbjct: 18  LFSLGMAFLIL----ASLAVACSGPEEKKMKFFNKGKSLYEKGEFVKAGLEFRNAIQIDP 73

Query: 292 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 351
           K   +   +Y LG V+L+ G+ ++A  +F K +E+ P+  +    LG++Y+   Q +KA 
Sbjct: 74  K---YADAHYMLGMVELRKGNLKNAYGSFSKAVELNPNLTDAHIQLGNLYLAARQPDKAL 130

Query: 352 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV 411
           +      ++ P +  A +     LI+    A  DA    R  +++ G + P E+   +  
Sbjct: 131 KKAETVLQLSPGNEDALLLKAAALIALKDSA--DALAILRD-MRQRGVKRP-ELFLLLAS 186

Query: 412 IHFEKGEFESAHQSFKDALGDG-----IWLTLLDSKTKTYVIDASASMLQ 456
            H +    + A  +    + D      ++LTL D  T+   ID +A+ LQ
Sbjct: 187 SHLQNNSIKEAQDALNTGIADNPKAVILYLTLADLYTRDKKIDEAAATLQ 236


>gi|218777993|ref|YP_002429311.1| hypothetical protein Dalk_0133 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759377|gb|ACL01843.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 616

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 8/177 (4%)

Query: 252 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 311
           V    P +S +Y+ LA +YH     EKA   Y   ++ +    + I  ++ +G+V   +G
Sbjct: 181 VLKTAPEESQTYFLLAETYHKANQPEKAISVYQRFIENLPNSPDVISAWFFIGRVAYNMG 240

Query: 312 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 371
           D+  A   FE+ L + PD  +    L  +Y +LG  EK Q +  K  +  P +   ++ L
Sbjct: 241 DYALAAQAFEETLLLKPDFEQVQLNLAEVYRELGNDEKVQAIYSKMMRDAPSNTLPYLGL 300

Query: 372 GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIH--FEKGEFESAHQSF 426
           G+  +S          + A  +  K  EE P + L   G+ H     G F  A + F
Sbjct: 301 GQYYLSRRE------LEKANEVFGKLREEHPQDPLVAKGIAHSYMNNGYFAEAAEIF 351



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 114/500 (22%), Positives = 197/500 (39%), Gaps = 119/500 (23%)

Query: 35  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 94
           +++I I  + G YY YL    +++     +   A+ Y +KA   D        G  ++L+
Sbjct: 76  HQKIIIPESSGAYYNYL---LSQRMLWNRNLDAASLYLDKAIAKDPESRFLKQGLLEILV 132

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD------------------- 135
            KG  + A     ++L+ D DNV  LL +A V     ++++                   
Sbjct: 133 EKGNYQGALEESALLLKEDPDNVRVLLTRAAVLLQLKKWNEASAVYEKVLKTAPEESQTY 192

Query: 136 ---------------SLEFYKRALQVHPSCPGAIR--LGIGLCRYKLGQLGKARQAFQRA 178
                          ++  Y+R ++  P+ P  I     IG   Y +G    A QAF+  
Sbjct: 193 FLLAETYHKANQPEKAISVYQRFIENLPNSPDVISAWFFIGRVAYNMGDYALAAQAFEET 252

Query: 179 LQLDP-------------------ENVEALVALAVMDLQANEAAGIRKGM-----EKMQR 214
           L L P                   E V+A+ +  + D  +N    +  G       ++++
Sbjct: 253 LLLKPDFEQVQLNLAEVYRELGNDEKVQAIYSKMMRDAPSNTLPYLGLGQYYLSRRELEK 312

Query: 215 AFEIY----------PYCA--MALNYLANHFF------FTGQH-----------FLVEQL 245
           A E++          P  A  +A +Y+ N +F      F+  H           FL   L
Sbjct: 313 ANEVFGKLREEHPQDPLVAKGIAHSYMNNGYFAEAAEIFSALHKQTPNDGELSYFLAYAL 372

Query: 246 TET-----ALAVTNHGPTKSHSYY-NLARSYHSKGDYEKAGLYYMASVKEINKPH----- 294
             T     AL      P KS  Y+  L  S +  G  E A    MA+++ +         
Sbjct: 373 ESTGRKQEALEAYQSIPPKSSYYFQGLIYSAYLTGKPEDA----MAALEALKAVESADHL 428

Query: 295 --EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
             EF+        +Q + G+   A+      +E  PDN   L +LG +Y + G  +   E
Sbjct: 429 ETEFVI---HASNLQQQAGNKELAVKALTDRIEEEPDNINLLYSLGVLYDKQGDKQACIE 485

Query: 353 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIG 410
            +++  KI+P +A A   LG     +D G  L   + A+ L+ KA E  P +  +++++G
Sbjct: 486 TMKQVLKIEPDNADALNFLG--YTYADLGQNL---QEAKKLVAKALEISPDDGYIVDSMG 540

Query: 411 VIHFEKGEFESAHQSFKDAL 430
            ++F+ GE+E A    K A+
Sbjct: 541 WVYFKLGEYEKALGYLKRAV 560



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 301 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ-IEKAQELLRKAAK 359
           Y LG +  K GD ++ +   ++VL+I PDN + L  LG+ Y  LGQ +++A++L+ KA +
Sbjct: 468 YSLGVLYDKQGDKQACIETMKQVLKIEPDNADALNFLGYTYADLGQNLQEAKKLVAKALE 527

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKG 417
           I P D      +G +         L  ++ A   LK+A E  P +  +  ++G  + + G
Sbjct: 528 ISPDDGYIVDSMGWVYFK------LGEYEKALGYLKRAVELAPKDPVIREHLGDAYLKTG 581

Query: 418 EFESAHQSFKDAL 430
             E A ++++ +L
Sbjct: 582 NPEKALETYRISL 594


>gi|195998618|ref|XP_002109177.1| hypothetical protein TRIADDRAFT_52944 [Trichoplax adhaerens]
 gi|190587301|gb|EDV27343.1| hypothetical protein TRIADDRAFT_52944 [Trichoplax adhaerens]
          Length = 1410

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 142/674 (21%), Positives = 265/674 (39%), Gaps = 122/674 (18%)

Query: 105 AFKIVLEADRDNVPALL----GQACVEFNRGRYSDSLEFYKRALQV--------HPSCPG 152
           + KI L+   DN P++       A V  N+G+Y D+L  Y ++L++        HPS   
Sbjct: 249 SLKIRLKTLGDNHPSVAESYNNIALVYKNQGKYDDALSMYNKSLKIRLEILGENHPSLAT 308

Query: 153 AIRLGIGLCRYKLGQLGKARQAFQRALQL--------DPENVEALVALAVMDLQANEAAG 204
           +    IG      G+   A   + ++L +         P   ++   +A +     +   
Sbjct: 309 SYN-NIGGVYDSQGKYDDALSMYNKSLDIRLVTYGNNHPSVADSYNNIATVYWNQGK--- 364

Query: 205 IRKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAV---- 252
               +     +F+I        +   A + N +   ++  G+H     +   +L +    
Sbjct: 365 YNDALTTYNESFKIRLATLGDNHSSVADSYNNIGGVYWNQGKHDDALPMFNKSLEIRLKT 424

Query: 253 --TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQ 305
              NH P+ + SY N+A  YH +G Y++A   Y  S+K   + H    P     Y  +G 
Sbjct: 425 LGDNH-PSVADSYNNIASVYHHQGKYDEALSMYNKSLKIRLETHGDNHPSLAESYNNIGG 483

Query: 306 VQLKLGDFRSALTNFEK----VLEIYPDN----CETLKALGHIYVQLGQIEKAQELLRKA 357
           V    G + SAL+ + K     LE   DN      +   +G +Y   G+ + A  +  K+
Sbjct: 484 VYYNQGTYDSALSMYSKSLNITLETTGDNHLSVANSYNNIGLVYDTQGKHDSALSMYNKS 543

Query: 358 AKID--------PRDAQAFIDLGELLISSDTGAALDAFKTARTLLK----KAGEEVP--I 403
             I         P  A ++ ++G   +  + G   DA       LK      G+  P   
Sbjct: 544 LNITLETFGDNHPSVATSYNNIGS--VYKNQGKYDDALTMYNKSLKIRQETLGDNHPSVA 601

Query: 404 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
           +  NNI +++  +G+++ A   +  +         L  + +T   +  +    +KD+ L 
Sbjct: 602 KSYNNIALVYKNQGKYDDALSMYNKS---------LKIRQETLGDNHPSVAESYKDIALV 652

Query: 464 HRFENDG---NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF----KYQDYVDA 516
             +EN G   N + +    + +      +L   H +VA S      ++    KY D +  
Sbjct: 653 --YENQGKYDNALSMYSKSLKITL---EILGDNHPSVADSYSKIATVYDHQGKYDDALSM 707

Query: 517 Y---LRLAAIAKARNNLQLSIELVNEALKVN--GKYPNALSMLG-DLELK----NDDWVK 566
           Y   L++  +    N+L ++    N AL  +  GKY +ALSM    LE++     D+   
Sbjct: 708 YNESLKIRVVRLGDNHLHVTDSYNNIALVYDHQGKYDDALSMYNKSLEIRLKTLGDNHPS 767

Query: 567 AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQH 626
             E++          ++ A +      Y  AL    ++ K+    LE   E        H
Sbjct: 768 VAESY----------NNIALVYKNQGKYDDALSMYNKSLKIR---LEILGE-------NH 807

Query: 627 TSNLYAANGAGVVLAEKGQFDVSKDLFTQ---VQEAASGSVFVQMPDVWINLAHVYFAQG 683
            S   + N  G V   +G++D +  ++ +   ++    G+    + D + N+A VY+ QG
Sbjct: 808 PSLATSYNNIGGVYDSQGKYDDALSMYNKSLDIRLVTYGNNHPSVADSYNNIATVYWNQG 867

Query: 684 NFALAMKMYQNCLR 697
            +  A+  Y    +
Sbjct: 868 KYNDALTTYNESFK 881



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 132/631 (20%), Positives = 248/631 (39%), Gaps = 120/631 (19%)

Query: 124 ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAF 175
           A V  ++G+Y D+L  Y ++L++        HPS   +    I L     G+   A   +
Sbjct: 230 ALVYDHQGKYDDALSMYNKSLKIRLKTLGDNHPSVAESYN-NIALVYKNQGKYDDALSMY 288

Query: 176 QRALQLDPENV-EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 234
            ++L++  E + E   +LA      N   G+     K   A  +Y               
Sbjct: 289 NKSLKIRLEILGENHPSLAT---SYNNIGGVYDSQGKYDDALSMYN-------------- 331

Query: 235 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EI 290
                   + L    +   N+ P+ + SY N+A  Y ++G Y  A   Y  S K     +
Sbjct: 332 --------KSLDIRLVTYGNNHPSVADSYNNIATVYWNQGKYNDALTTYNESFKIRLATL 383

Query: 291 NKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIY 341
              H  +   Y  +G V    G    AL  F K LEI        +P   ++   +  +Y
Sbjct: 384 GDNHSSVADSYNNIGGVYWNQGKHDDALPMFNKSLEIRLKTLGDNHPSVADSYNNIASVY 443

Query: 342 VQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDT-GAALDAF-KTAR 391
              G+ ++A  +  K+ KI         P  A+++ ++G +  +  T  +AL  + K+  
Sbjct: 444 HHQGKYDEALSMYNKSLKIRLETHGDNHPSLAESYNNIGGVYYNQGTYDSALSMYSKSLN 503

Query: 392 TLLKKAGEE--VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 449
             L+  G+         NNIG+++  +G+ +SA   +  +L     +TL     +T+  +
Sbjct: 504 ITLETTGDNHLSVANSYNNIGLVYDTQGKHDSALSMYNKSLN----ITL-----ETFGDN 554

Query: 450 ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ-----IHDTVAASVLYR 504
             +    + ++     ++N G      ++    ++N +  + Q      H +VA S    
Sbjct: 555 HPSVATSYNNIGSV--YKNQG-----KYDDALTMYNKSLKIRQETLGDNHPSVAKSYNNI 607

Query: 505 LILF----KYQDYVDAY-----LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 555
            +++    KY D +  Y     +R   +     ++  S + +    +  GKY NALSM  
Sbjct: 608 ALVYKNQGKYDDALSMYNKSLKIRQETLGDNHPSVAESYKDIALVYENQGKYDNALSMYS 667

Query: 556 -----DLELKNDDWVKAKETFRAASDATDGKDSY-ATLSLGNWNYFAALRNEKRAPKLEA 609
                 LE+  D+     +++   +   D +  Y   LS+    Y  +L+   R  +L  
Sbjct: 668 KSLKITLEILGDNHPSVADSYSKIATVYDHQGKYDDALSM----YNESLK--IRVVRLGD 721

Query: 610 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 669
            HL             H ++ Y  N   +V   +G++D +  ++ +  E    ++    P
Sbjct: 722 NHL-------------HVTDSY--NNIALVYDHQGKYDDALSMYNKSLEIRLKTLGDNHP 766

Query: 670 DV---WINLAHVYFAQGNFALAMKMYQNCLR 697
            V   + N+A VY  QG +  A+ MY   L+
Sbjct: 767 SVAESYNNIALVYKNQGKYDDALSMYNKSLK 797



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 135/668 (20%), Positives = 242/668 (36%), Gaps = 152/668 (22%)

Query: 105  AFKIVLEADRDNVPALL----GQACVEFNRGRYSDSLEFYKRALQV--------HPSCPG 152
            + +I L+   DN P++       A V  N+G+Y D+L  Y ++L++        HPS   
Sbjct: 753  SLEIRLKTLGDNHPSVAESYNNIALVYKNQGKYDDALSMYNKSLKIRLEILGENHPSLAT 812

Query: 153  AIRLGIGLCRYKLGQLGKARQAFQRALQL--------DPENVEALVALAVMDLQANEAAG 204
            +    IG      G+   A   + ++L +         P   ++   +A +     +   
Sbjct: 813  SYN-NIGGVYDSQGKYDDALSMYNKSLDIRLVTYGNNHPSVADSYNNIATVYWNQGK--- 868

Query: 205  IRKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAV---- 252
                +     +F+I        +   A + N +   ++  G+H     +   +L +    
Sbjct: 869  YNDALTTYNESFKIRLATLGDNHSSVADSYNNIGGVYWNQGKHDDALPMFNKSLEIRLKT 928

Query: 253  --TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQ 305
               NH P+ + SY N+A  YH +G Y++A   Y  S+K   + H    P     Y  +G 
Sbjct: 929  LGDNH-PSVADSYNNIASVYHHQGKYDEALSMYNKSLKIRLETHGDNHPSLAESYNNIGG 987

Query: 306  VQLKLGDFRSALTNFEK----VLEIYPDN----CETLKALGHIYVQLGQIEKAQELLRKA 357
            V    G + SAL+ + K     LE   DN      +   +G +Y   G+ + A  +  K+
Sbjct: 988  VYYNQGTYDSALSMYSKSLNITLETTGDNHLSVANSYNNIGLVYDTQGKHDSALSMYNKS 1047

Query: 358  AKID--------PRDAQAFIDLGELLISSDTGAALDAFKTARTLLK----KAGEEVP--I 403
              I         P  A ++ ++G   +  + G   DA       LK      G+  P   
Sbjct: 1048 LNITLETFGDNHPSVATSYNNIGS--VYKNQGKYDDALSMYNKSLKIRQETLGDNHPKVA 1105

Query: 404  EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 463
            +  NNI +++  +G+++ A   +  +         L  + +T   +  +    +KD+ L 
Sbjct: 1106 KSYNNIALVYKNQGKYDDALSMYNKS---------LKIRQETLGDNHPSVAESYKDIALV 1156

Query: 464  HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY-----L 518
              + N G                                      KY D +  Y     +
Sbjct: 1157 --YNNQG--------------------------------------KYDDALSMYNKSLKI 1176

Query: 519  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG---DLELKNDDWVKAKETFRAAS 575
            R   + +   NL  S   +       GKY +ALSM     D+ L               +
Sbjct: 1177 RQETLGENHPNLANSYNSIALVYDHQGKYDDALSMYNKSLDIRL-----------VTYGN 1225

Query: 576  DATDGKDSYATLSLGNWN---YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYA 632
            + +   DSY  ++   WN   Y  AL +   + K+    L             H S   +
Sbjct: 1226 NHSSVADSYNNIATVYWNQGKYNDALTSYNESFKIRLATLGD----------NHPSVADS 1275

Query: 633  ANGAGVVLAEKGQFDVSKDLFT---QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAM 689
             N  G V   +G+ D +  +F    +++    G     + D + N+A VY  QG +  A+
Sbjct: 1276 YNNIGGVYWNQGKHDDALPMFNKSLEIRLKTLGDNHPSVADSYNNIASVYHHQGKYDEAL 1335

Query: 690  KMYQNCLR 697
             MY   L+
Sbjct: 1336 SMYNKSLK 1343



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 74/342 (21%), Positives = 132/342 (38%), Gaps = 54/342 (15%)

Query: 105  AFKIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV--------HPSCPG 152
            +  I LE   DN P++         V  N+G+Y D+L  Y ++L++        HP    
Sbjct: 1047 SLNITLETFGDNHPSVATSYNNIGSVYKNQGKYDDALSMYNKSLKIRQETLGDNHPKVAK 1106

Query: 153  AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV---EALVALAVMD--LQANEAAGIRK 207
            +    I L     G+   A   + ++L++  E +      VA +  D  L  N       
Sbjct: 1107 SYN-NIALVYKNQGKYDDALSMYNKSLKIRQETLGDNHPSVAESYKDIALVYNNQGKYDD 1165

Query: 208  GMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAV-----TN 254
             +    ++ +I        +P  A + N +A  +   G++     +   +L +      N
Sbjct: 1166 ALSMYNKSLKIRQETLGENHPNLANSYNSIALVYDHQGKYDDALSMYNKSLDIRLVTYGN 1225

Query: 255  HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFIF-PYYGLGQVQLK 309
            +  + + SY N+A  Y ++G Y  A   Y  S K     +   H  +   Y  +G V   
Sbjct: 1226 NHSSVADSYNNIATVYWNQGKYNDALTSYNESFKIRLATLGDNHPSVADSYNNIGGVYWN 1285

Query: 310  LGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI- 360
             G    AL  F K LEI        +P   ++   +  +Y   G+ ++A  +  K+ KI 
Sbjct: 1286 QGKHDDALPMFNKSLEIRLKTLGDNHPSVADSYNNIASVYHHQGKYDEALSMYNKSLKIR 1345

Query: 361  -------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 395
                    P  A+++ ++G  L+  + G   DA       LK
Sbjct: 1346 LETHGDNHPSLAESYNNIG--LVYDNQGKHDDALSMYNKSLK 1385



 Score = 46.6 bits (109), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 83/419 (19%), Positives = 166/419 (39%), Gaps = 88/419 (21%)

Query: 68   ATQYYNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAFK----IVLEADRD 115
            A   YNK+ +I +     + PS   ++   G +  ++G+ + A S +     I L    +
Sbjct: 788  ALSMYNKSLKIRLEILGENHPSLATSYNNIGGVYDSQGKYDDALSMYNKSLDIRLVTYGN 847

Query: 116  NVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRY 163
            N P++       A V +N+G+Y+D+L  Y  + ++        H S   +    IG   +
Sbjct: 848  NHPSVADSYNNIATVYWNQGKYNDALTTYNESFKIRLATLGDNHSSVADSYN-NIGGVYW 906

Query: 164  KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 223
              G+   A   F ++L++                             +++   + +P  A
Sbjct: 907  NQGKHDDALPMFNKSLEI-----------------------------RLKTLGDNHPSVA 937

Query: 224  MALNYLANHFFFTGQHFLVEQLTETALAV--TNHG---PTKSHSYYNLARSYHSKGDYEK 278
             + N +A+ +   G++     +   +L +    HG   P+ + SY N+   Y+++G Y+ 
Sbjct: 938  DSYNNIASVYHHQGKYDEALSMYNKSLKIRLETHGDNHPSLAESYNNIGGVYYNQGTYDS 997

Query: 279  AGLYYMASVK---EINKPHEFIF--PYYGLGQVQLKLGDFRSALTNFEKVLEI------- 326
            A   Y  S+    E    +       Y  +G V    G   SAL+ + K L I       
Sbjct: 998  ALSMYSKSLNITLETTGDNHLSVANSYNNIGLVYDTQGKHDSALSMYNKSLNITLETFGD 1057

Query: 327  -YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLIS 377
             +P    +   +G +Y   G+ + A  +  K+ KI         P+ A+++ ++   L+ 
Sbjct: 1058 NHPSVATSYNNIGSVYKNQGKYDDALSMYNKSLKIRQETLGDNHPKVAKSYNNIA--LVY 1115

Query: 378  SDTGAALDAFKTARTLLK----KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             + G   DA       LK      G+  P   E   +I +++  +G+++ A   +  +L
Sbjct: 1116 KNQGKYDDALSMYNKSLKIRQETLGDNHPSVAESYKDIALVYNNQGKYDDALSMYNKSL 1174


>gi|425454202|ref|ZP_18833948.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9807]
 gi|389805176|emb|CCI15197.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9807]
          Length = 569

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 27/300 (9%)

Query: 86  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 145
           ++ +G  LLA GE E A SA++ VL    ++V A +  A V  ++ RYS++L+ Y R   
Sbjct: 41  YLWQGDRLLAAGEKESALSAYRTVLSFHENSVQAHIKIAQVLQSQKRYSEALQAYDRGFI 100

Query: 146 VHPSCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQ- 198
           V+   P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+   Q 
Sbjct: 101 VNNKPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAIIIKPTFKAQFQLGKALYSSQR 160

Query: 199 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-- 256
            +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A         
Sbjct: 161 WDEAA------KALQAAVFLDPTQGKA-------YFYLGKAYSEQQLWPEASYAYQQALE 207

Query: 257 --PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 314
             P +  +Y  L  +   +G +E+A   Y  ++    K  +    Y  LG+   + G   
Sbjct: 208 LIPDQGETYKKLGETLAKQGKWEEAEQIYRQALIYAPKDGDI---YNYLGEALAEQGKLG 264

Query: 315 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 374
            A+  F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++    L E+
Sbjct: 265 EAMAVFQQARQISPKNAKIYENLCYIYINNGQIDEGLNWCRQAVEIDPNLSEVRFILEEI 324


>gi|440753799|ref|ZP_20933001.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
 gi|440174005|gb|ELP53374.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
          Length = 717

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 154/338 (45%), Gaps = 31/338 (9%)

Query: 102 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 161
           A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P       LG G  
Sbjct: 361 ALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLGRGEA 420

Query: 162 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM----QRAFE 217
             KL +  +A ++F+R L L+P   +A    A + L+  + +  +K ++K+    Q   +
Sbjct: 421 LDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAK 480

Query: 218 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKSHSYYNLARSYHSK 273
           I+     +L  L +   + G     +Q    ALA+ +        K +S Y L +  ++ 
Sbjct: 481 IWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKGNSLYQLNKINNAL 533

Query: 274 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 333
             Y KAG +          P +F   +Y  G +  KLG    AL  F +  +   +  + 
Sbjct: 534 ESYSKAGQF---------NP-QFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQA 583

Query: 334 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 392
               G +  QL + ++A     KA +I  R ++ FI +G       D   A+ A++ A  
Sbjct: 584 WLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQ 643

Query: 393 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 430
             K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 644 RQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 676



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 69/325 (21%), Positives = 132/325 (40%), Gaps = 50/325 (15%)

Query: 35  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 94
           YE+   +N    +  +LG+ E   +  +    L +  + +   ++      W GK  + L
Sbjct: 399 YEKAIQINPDSAWQAWLGRGEALDKLDKNQEALES--FERVLSLNPAASQAWQGKADIYL 456

Query: 95  AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 154
              +   A  A   +L   +++      +     N   Y  +++ Y +AL +  S    I
Sbjct: 457 ELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIE-SDNALI 515

Query: 155 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 214
               G   Y+L ++  A +++ +A Q +P+  +A  +  ++             ++K+ R
Sbjct: 516 WYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAHYSQGII-------------LQKLGR 562

Query: 215 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 274
             E       A    +N++    Q +L            N G       + L R   +  
Sbjct: 563 NSEALEAFTQATKANSNYY----QAWL------------NQGAL----LHQLERFQEAIA 602

Query: 275 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 334
            YEKA        + I+     +F   G+G    +LGD+  A+T +++ ++   DN ET 
Sbjct: 603 SYEKA--------RRISSRKSEVF--IGIGNACYRLGDYSQAITAYQQAIQRQKDNPETW 652

Query: 335 KALGHIYVQLGQIEKA----QELLR 355
           K+LG+ + +LGQ E+A    QE LR
Sbjct: 653 KSLGNSWFKLGQYERAIQAYQESLR 677


>gi|434387210|ref|YP_007097821.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428018200|gb|AFY94294.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 490

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 134/337 (39%), Gaps = 13/337 (3%)

Query: 72  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 131
           +  AS I   +P   +GKG +L   G+ + A +++   ++ D  NV A   +   + + G
Sbjct: 157 FQAASAIKPTDPQLAIGKGIILSQNGDKQGAIASYAQAIQLDPKNVDAFYNRGIAKLDLG 216

Query: 132 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 191
            ++ +L  + R + + P+   A   G G  R  +G    A   F RA+ L+P +  A   
Sbjct: 217 DFTGALADFDRVIALRPNYAKAYN-GRGKTRELMGDSQAALADFNRAIALNPNSSNAYFN 275

Query: 192 LAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 250
            A     A  + G R G +    R   I P  A A     N      ++    Q      
Sbjct: 276 RA----NAQNSLGNRTGAISDYDRVASINPTDAFAF---FNRAIIKAENGDKTQAIADYT 328

Query: 251 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 310
                 P    +Y N    Y S G+ + A   Y  +++   KP+ +   Y   G V    
Sbjct: 329 TALKLNPKLVEAYNNRGILYSSIGNRQAAIADYTQAIQL--KPN-YGTAYLNRGIVYYVA 385

Query: 311 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 370
           G++R A+ ++ + +   P N +     G    QL + +KA      A ++ P +A A+ +
Sbjct: 386 GEYRKAIADYTQGIASDPKNADLYFNRGVSLAQLQEYQKALADYNTAIRLQPNNALAYSN 445

Query: 371 LGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVL 406
            G L        AA +  KTA  L +    +   E +
Sbjct: 446 RGLLQAQLQANSAATEDLKTAARLFQAQNNQAAYESV 482



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 4/131 (3%)

Query: 300 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 359
           Y G G+ +  +GD ++AL +F + + + P++        +    LG    A     + A 
Sbjct: 239 YNGRGKTRELMGDSQAALADFNRAIALNPNSSNAYFNRANAQNSLGNRTGAISDYDRVAS 298

Query: 360 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 419
           I+P DA AF +    +I ++ G    A     T LK   + V  E  NN G+++   G  
Sbjct: 299 INPTDAFAFFN--RAIIKAENGDKTQAIADYTTALKLNPKLV--EAYNNRGILYSSIGNR 354

Query: 420 ESAHQSFKDAL 430
           ++A   +  A+
Sbjct: 355 QAAIADYTQAI 365


>gi|408791229|ref|ZP_11202839.1| tetratricopeptide repeat protein [Leptospira meyeri serovar Hardjo
           str. Went 5]
 gi|408462639|gb|EKJ86364.1| tetratricopeptide repeat protein [Leptospira meyeri serovar Hardjo
           str. Went 5]
          Length = 1197

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 137/330 (41%), Gaps = 40/330 (12%)

Query: 119 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 178
           AL+ +   EF +G    +LE  K ++Q      G   LG     Y+LG    A+ AF++ 
Sbjct: 48  ALVAEGSNEFQKGNMDSALEKAKASIQTFELIDGYSLLGSSY--YQLGDYENAKLAFEKG 105

Query: 179 LQLDPENVEALVALAVMD--LQANE-AAGIRKGMEKMQRAFEIYPY-------------- 221
             +DP+N + L+ L  +   L  NE A    + + +++    IY Y              
Sbjct: 106 KNIDPKNEKLLIGLGTVQSTLGENEDALSTYQTLSQLKPEETIYTYKTGILLKNLGRYQE 165

Query: 222 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 281
             + L  L     F     L+ QL +  L +           Y  A +Y +K +     L
Sbjct: 166 SLVVLKSLETKAEFPYPIELLNQLGDVCLELKR---------YEEAEAYFAKAEKLNPEL 216

Query: 282 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 341
                 K   K    I      G   L   ++  A T F+K  ++ P N      LG+  
Sbjct: 217 KTAKDAKLSTKIASLI----QRGNDFLAKKNYTEATTEFKKATDLQPQNGSLWSFLGNAQ 272

Query: 342 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEV 401
           +  G++++++E  +K+  +   +  A++ L  + I +   +  D  KT+    K+AG ++
Sbjct: 273 LLGGKLKESEESFKKSISLADTNPNAYVGLCNVYIQTHNYS--DCLKTS----KQAGIKI 326

Query: 402 P--IEVLNNIGVIHFEKGEFESAHQSFKDA 429
           P   E+ N  G+  ++ GE + A  SF+DA
Sbjct: 327 PKNAEIRNKQGICEWKWGETKKATLSFQDA 356



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 127/322 (39%), Gaps = 50/322 (15%)

Query: 62  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 121
           ++++  AT  + KA+ +     S W   G   L  G+++++  +FK  +     N  A +
Sbjct: 241 KKNYTEATTEFKKATDLQPQNGSLWSFLGNAQLLGGKLKESEESFKKSISLADTNPNAYV 300

Query: 122 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 181
           G   V      YSD L+  K+A    P     IR   G+C +K G+  KA  +FQ A   
Sbjct: 301 GLCNVYIQTHNYSDCLKTSKQAGIKIPKN-AEIRNKQGICEWKWGETKKATLSFQDAASW 359

Query: 182 DPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRA----FEIYPYCAMALNYLANHFF 234
           DP   E  + LA + + +    EA  + K  E   +A           A +  Y+A+   
Sbjct: 360 DPNFFEPKLNLAYVLIDSGRFEEALDVLKKAESHPKAKKEEIRKAKVLAESQKYIASGDV 419

Query: 235 FTGQHFLVEQLTE--TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 292
           F  Q    +   +   A+ V    P   +++    R+Y + G+Y+K+   Y+ +      
Sbjct: 420 FLRQGKRKQAFDDYGKAMGVNPENPAAQNAF---GRAYFAFGEYKKSESSYLEA------ 470

Query: 293 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 352
                               +R   TN        P     L+ L  +Y + G+ +K +E
Sbjct: 471 --------------------YRMDSTN--------PG---ALQGLARVYAKTGESKKEKE 499

Query: 353 LLRKAAKIDPRDAQAFIDLGEL 374
            ++K   +   D  + I LG +
Sbjct: 500 YIKKLEILSATDPFSAITLGRI 521


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.132    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,647,555,207
Number of Sequences: 23463169
Number of extensions: 664650802
Number of successful extensions: 4775308
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12207
Number of HSP's successfully gapped in prelim test: 47850
Number of HSP's that attempted gapping in prelim test: 3841348
Number of HSP's gapped (non-prelim): 484832
length of query: 1043
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 890
effective length of database: 8,769,330,510
effective search space: 7804704153900
effective search space used: 7804704153900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)