Query 001621
Match_columns 1043
No_of_seqs 443 out of 2903
Neff 8.2
Searched_HMMs 29240
Date Tue Mar 26 15:49:23 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001621.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_920-923//hhsearch_pdb/001621hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 613.6 78.8 748 20-847 2-843 (902)
2 2ymu_A WD-40 repeat protein; u 1.0 1 1 400.7 64.8 552 31-823 12-571 (577)
3 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 400.5 56.5 611 29-822 609-1239(1249)
4 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 386.5 48.7 553 72-826 611-1203(1249)
5 1nr0_A Actin interacting prote 1.0 1 1 379.6 64.7 553 33-821 16-600 (611)
6 2ymu_A WD-40 repeat protein; u 1.0 1 1 375.8 62.7 520 30-780 52-577 (577)
7 1nr0_A Actin interacting prote 1.0 1 1 373.3 61.7 538 31-782 55-610 (611)
8 1pgu_A Actin interacting prote 1.0 1 1 339.1 63.9 544 32-820 15-602 (615)
9 1pgu_A Actin interacting prote 1.0 1 1 334.0 51.8 527 30-782 58-613 (615)
10 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 326.3 61.3 593 73-819 14-780 (902)
No 1
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=613.56 Aligned_cols=748 Identities=15% Similarity=0.189 Sum_probs=540.0
Q ss_pred CCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 84675430120126798839999948999899999699299993898259983699989599999649989999978993
Q 001621 20 TAADLNLRIAVHYGIPATASILAFDHIQRLLAIATLDGRIKVIGGDGIEGLLISPSQLPYKNLEFLQNQGFLISITNDNE 99 (1043)
Q Consensus 20 ~~~~~~~~~~~~~G~~~~v~~lafsp~~~lLAvgt~DG~I~v~~~~~~~~~~~~~~~~~V~~l~F~~d~~~Lis~s~d~~ 99 (1043)
+++.|+++...++||++.|++++|+|++++||+|+.||.|+||+..+.+....+++..+|++++|++ +.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~ 80 (902)
T 2oaj_A 2 KNKIFSLAETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDT 80 (902)
T ss_dssp CCTTEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCE
T ss_pred CHHEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCEEEEEECC-CCEEEEEECCCE
T ss_conf 4122202120216889984899997999989999297989999689947999868999779999908-988999989595
Q ss_pred EEEEECCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCEEEEECEEECCCCCCCCCCCCCCCCCCE
Q ss_conf 99998899935577406997899999079999999937996999998479992763025515431000137898898896
Q 001621 100 IQVWSLESRSLACCLKWESNITAFSVISGSHFMYIGDENGLMSVIKYDADEGKLFQLPYNISADALSEKAGFPLLSHQPV 179 (1043)
Q Consensus 100 I~vWdl~t~~~l~~~~~~~~Vt~i~~~p~~~~l~vG~~dG~I~vw~~d~~~~~l~~~p~~i~~~~~~~~~~~~~~~~~~V 179 (1043)
|++||+.+++++.++..++.|++++|+|+++++++|+.+|.|++|+++. .++. ++.++..+.. ......|..+|
T Consensus 81 v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~--~~~~--~~~i~~~~~~--~~~~~~h~~~V 154 (902)
T 2oaj_A 81 VYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDR--DQLS--SFKLDNLQKS--SFFPAARLSPI 154 (902)
T ss_dssp EEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTT--TEEE--EEEECCHHHH--HTCSSSCCCCC
T ss_pred EEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCC--CCCC--CCEECCCCCC--CCCCCCCCCCE
T ss_conf 9999899996899974899879999879999899994999299999999--9626--5030432100--02544578973
Q ss_pred EEEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 99980679999979999979869999864895999927766533466236999999875457667888889849999835
Q 001621 180 VGVLPHPNSSGNRVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDSPSEGDSTFLEGISEHQPEEKEISALCWAS 259 (1043)
Q Consensus 180 ~sl~~~p~d~g~~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~V~sl~w~s 259 (1043)
.+++|+|++ +..+++++.+|.| +||+++++.+..+.+ +.+ ++.+.+.... .....|...|++++|+
T Consensus 155 ~sl~~sp~~-~~~l~~g~~dg~v-lWd~~~~~~~~~~~~-------~~~---~g~~~~~~~~-~~~~~h~~~V~~v~fs- 220 (902)
T 2oaj_A 155 VSIQWNPRD-IGTVLISYEYVTL-TYSLVENEIKQSFIY-------ELP---PFAPGGDFSE-KTNEKRTPKVIQSLYH- 220 (902)
T ss_dssp CEEEEETTE-EEEEEEECSSCEE-EEETTTTEEEEEECC-------CBC---TTCCCSTTCC-CTTSCBCCCEEEEEEC-
T ss_pred EEEEECCCC-CCEEEEEECCCCE-EEECCCCCEEEEEEC-------CCC---CCCCCCCCCC-CCCCCCCCCEEEEEEC-
T ss_conf 899976699-9989999189849-998778965799833-------557---7677765443-3234567776899985-
Q ss_pred CCCCEEEEEECCCCEEEECCCCCCCCCCCCC---CCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCC
Q ss_conf 9999899998589199990999985466568---8778520000365567862699993027887889885499962878
Q 001621 260 SSGSILAVGYIDGDILLWNTSTTASTKGQQT---GSRNNVVKLELSSAERRLPVIVLHWSTNKESRSNIDGRLFVYGGDE 336 (1043)
Q Consensus 260 p~g~~i~tg~~DG~I~iWd~~tg~~~~~~~~---~~~~~~~~l~l~~~~~~~~i~~l~w~~~~~~~~~~~~~llv~gg~~ 336 (1043)
|+|.+|++++.||.|++||+.+++.+..+.. ..+.+..........+..+|..+.|++.. +|+++.++++|+.+
T Consensus 221 pdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~---~pd~~~ll~sg~~~ 297 (902)
T 2oaj_A 221 PNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCEN---NPEYTSLLISHKSI 297 (902)
T ss_dssp TTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECS---STTEEEEEEEEECS
T ss_pred CCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC---CCCCCEEEEECCCC
T ss_conf 999999999899939999878996888885012345787776788885556774579997349---99887899968877
Q ss_pred CCC-CCEEEEEECCCCC------------CCCCCEEEEEEEECCCCCEEEEEEEECCCC--CCCCCCCEEEEECCCCEEE
Q ss_conf 999-6439999848643------------454420213685169984208999014898--8878940799983898377
Q 001621 337 IGS-EEVLTVLSLEWSS------------GMENLRCVSRVDITLTGSFADMILLSSAGA--TVGNHKADLFVLTSPGQLH 401 (1043)
Q Consensus 337 ~~~-~~~ltv~~l~~~~------------~~~~~~~~~~~~l~~~~~v~d~~~~p~~s~--~g~~~~~~l~vl~~~G~l~ 401 (1043)
.+. .+.+.+|+++... ......+...+.+.+.+.+.++.++++.++ .|.+++..+++++.+|++.
T Consensus 298 ~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~ 377 (902)
T 2oaj_A 298 SRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIE 377 (902)
T ss_dssp TTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEE
T ss_pred CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEE
T ss_conf 77888528999547898755542556546641745227874189995479999778898867787850699991798489
Q ss_pred EEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 96264300010258999998984577325778996339999962689874445768987113479987667654433489
Q 001621 402 FYDNASLTTLLSQQEKKPSVCPVEFPGVIPISDPIMTVAEFMLLPFGGHSSKGLSEIATFTKLHSSHTQAGHIKWPLSGG 481 (1043)
Q Consensus 402 ~~d~~~~~~~l~~~~~~~~~~~~~~p~~l~~~~~~it~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~pl~Gg 481 (1043)
+||... +....+....+..+..|++.++++++...+. ..|+....... ...|++.||
T Consensus 378 ~~~~~~---------g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~-----~~w~~~~~~~~---------~~~~~l~G~ 434 (902)
T 2oaj_A 378 TMLYPS---------GIFTDKASLFPQNLSWLRPLATTSMAASVPN-----KLWLGALSAAQ---------NKDYLLKGG 434 (902)
T ss_dssp EEETTT---------CCEECCGGGSCGGGTTBTTBEEEEEEEEEEH-----HHHHHHHHTTB---------CCCCSCCCS
T ss_pred EEECCC---------CCCCCCCCCCCCCCCCCCCCEEEEEEEECCH-----HHHHHHHHCCC---------CCCCCCCCC
T ss_conf 997899---------9855655568985223589724899997499-----99988886046---------999754578
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCEEEEEEC-----CCCCCEEEEEEECCCCEEEEEEC
Q ss_conf 8987776556888819999958984999728999723444320513357752-----99988479999159991999940
Q 001621 482 VPSPVPITKCHSVDRVYLAGYHDGSVRIWDATYPVFKLICALDAEVQGIEVA-----GSRAPVSTLSFCFINSSLAVGNE 556 (1043)
Q Consensus 482 ~~~~~~~~~~s~~~~~l~Tg~~DgtVriWD~~~~~l~~~~~l~~~~~~i~~~-----~~~~~V~~l~fspd~~~La~g~~ 556 (1043)
...+.++ +++|++++|+||+.||+||+||+..+.+... ....+.+. +|...|++|+|+|++.+||+|+.
T Consensus 435 ~~~v~sv-~~spdg~~laSgs~DgtVrlWd~~~g~~~~~-----~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~ 508 (902)
T 2oaj_A 435 VRTKRQK-LPAEYGTAFITGHSNGSVRIYDASHGDIQDN-----ASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE 508 (902)
T ss_dssp BCCCCCC-CCCSEEEEEEEEETTSEEEEEESSCCTTTTT-----BCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred CCCCCCC-CCCCCCCEEEEECCCCCEEEEECCCCCCCCC-----CEEEEECHHHCCCCCCCCEEEEEECCCCCEEEEEEC
T ss_conf 5778753-3366675899965898389997877645677-----367750154137788876469996389996999945
Q ss_pred CCCEEEEEECCCCCCC----------CEEE----ECCCCCCEEEECC------CCCCEEEEEECCCCCCEEEEEECCCCC
Q ss_conf 7519999963787653----------1012----1058771333237------985115687217998889999859995
Q 001621 557 FGLVYIYNLNGSLDAK----------NFLF----VLETKSEVHALPE------GKISLCRAVFSLVNSPVRALQFTSSGA 616 (1043)
Q Consensus 557 dG~V~i~~~~~~~~~~----------~~~f----~~~~~~~~~~~~~------~~~~~~~~~l~~h~~~Vtala~sp~g~ 616 (1043)
||+|+||++.++...+ ...| +..+++....+.. ..++++...+.+|.++|++|+|||+|
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG- 587 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG- 587 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC-
T ss_conf 8579999924865557545577866511345513467965432242368988777601469998688867799964876-
Q ss_pred EEEEEECCCEEEEEECCCCEEEEEEECC---CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE
Q ss_conf 9999948980999975875499995068---9999883999998312776556899998898888987429999616821
Q 001621 617 KLAVGFECGRVAVLDMNLLSVLFFTDDI---SGSSSPIISMTWTEFKNTHSLAKNPNHSEREVPVNPAEEVIIVLFKDAK 693 (1043)
Q Consensus 617 ~lA~Gs~dG~V~iwD~~~~~~i~~~~~~---~~~~~~V~sl~fs~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~gt~dg~ 693 (1043)
+||+|+.||+|++||++++.+++...+. .++...|++++|+.... ..+++++.+|++|+.|++
T Consensus 588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~--------------~~Dg~~~~~l~sgs~D~t 653 (902)
T 2oaj_A 588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEY--------------GDDGYSSILMVCGTDMGE 653 (902)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEEC--------------TTSSSEEEEEEEEETTSE
T ss_pred EEEEEECCCCEEEEECCCCEEEEEEEHHHHCCCCCCCEEEEEEEEEEC--------------CCCCCCCEEEEEEECCCC
T ss_conf 899995897699998889839997024672646666139999999841--------------789876338999956873
Q ss_pred EEEECC---CCCCEEEC----------------CCCCCCCCCEE---------------EEEEEE----CCEEEEEECCC
Q ss_conf 999908---99972424----------------77786877314---------------889982----40788860764
Q 001621 694 ISIVGG---SSENMISS----------------SPWHLKKKVIA---------------ISMEVI----DSVRLYSRKSV 735 (1043)
Q Consensus 694 i~v~d~---~~g~~i~~----------------~~~~~~~~~~a---------------~~~~i~----~~irl~~~~~~ 735 (1043)
|++||. .+|+.+.. .+++.+.+..+ ..++++ ..+|||++.+
T Consensus 654 v~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~- 732 (902)
T 2oaj_A 654 VITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLGK- 732 (902)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEECSSEEEEECTTC-
T ss_pred EEEEEEECCCCCCEEEEECCCEECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCEEEEECCC-
T ss_conf 9999995589986899966724407889647998586687973668878972557788777399999354059996753-
Q ss_pred CCCCCCEEEECCCCCCCEEEEE--EE------ECCEEEEEEEEEEECCEEEEECCCHHHHHHHCCCCEEEEECCCCCCEE
Q ss_conf 5898620210056876114994--53------065037999997508099981898124444023421221006777401
Q 001621 736 IQGNNKTVQKVKHKNRCCWAST--IE------KDEKVCGLLLLFQTGAVQIRSLPDLELVMESSLMSILRWNFKANMDKT 807 (1043)
Q Consensus 736 ~~g~~k~~~k~~~~~~c~~~~~--~~------~~~~g~~Lv~~~~dG~i~i~slp~l~~~~~~~l~~~~~~~~~~~~~~~ 807 (1043)
.|..+|. +..+|+++++ +. ++++++.|+++++||.|++|++|+|+++++.++...++. +..+.
T Consensus 733 ----~k~~~k~-~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~~~~~~~----~~~~~ 803 (902)
T 2oaj_A 733 ----SKSTHKG-FKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHIPFPIAA----KYITE 803 (902)
T ss_dssp ----CCEEEEE-CSSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEECSSCCCH----HHHTT
T ss_pred ----CCCEEEE-CCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHCCCCCCCCC----CCCCC
T ss_conf ----3512367-25620144777887013555446736999992799599997856477841658860244----64320
Q ss_pred EEEC-CCCEEEECC-CEEEEEEECCCCCCCCCCCCCCHHHHH
Q ss_conf 4724-994999915-335999810388863346887402443
Q 001621 808 ISAD-NGQITLANG-SEVAFVNLLAGENEFSILESSPCLHDK 847 (1043)
Q Consensus 808 i~~s-dg~~~l~~g-~e~~~~s~l~~~~~~~~~~s~~~~~~k 847 (1043)
.+++ +|+++.+.| .|+.+++++.....++.+ ...+|.-
T Consensus 804 ~~~~~~G~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~l~~~ 843 (902)
T 2oaj_A 804 SSVLRNGDIAIRVSEFQASLFSTVKEQDTLAPV--SDTLYIN 843 (902)
T ss_dssp CEECTTSCEEEECSSSEEEEEEEESCCCCCCCC--CCBCCCT
T ss_pred EEECCCCCEEEEECHHHEEEEEEECCCCCCCCC--CCEEECC
T ss_conf 289689889998270264899997477777887--7434278
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=400.67 Aligned_cols=552 Identities=13% Similarity=0.167 Sum_probs=347.8
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCE
Q ss_conf 12679883999994899989999969929999389825998369998959999964998999997899399998899935
Q 001621 31 HYGIPATASILAFDHIQRLLAIATLDGRIKVIGGDGIEGLLISPSQLPYKNLEFLQNQGFLISITNDNEIQVWSLESRSL 110 (1043)
Q Consensus 31 ~~G~~~~v~~lafsp~~~lLAvgt~DG~I~v~~~~~~~~~~~~~~~~~V~~l~F~~d~~~Lis~s~d~~I~vWdl~t~~~ 110 (1043)
..||.+.|++++|+|++++||+|+.||.|+||+..+........|..+|++++|+|++.+|++++.|++|++||+ ++++
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~ 90 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQL 90 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCE
T ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCE
T ss_conf 878998579999989989999993899899997999789999689899899999899999999969897999989-9978
Q ss_pred EEEEECC-CCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 5774069-978999990799999999379969999984799927630255154310001378988988969998067999
Q 001621 111 ACCLKWE-SNITAFSVISGSHFMYIGDENGLMSVIKYDADEGKLFQLPYNISADALSEKAGFPLLSHQPVVGVLPHPNSS 189 (1043)
Q Consensus 111 l~~~~~~-~~Vt~i~~~p~~~~l~vG~~dG~I~vw~~d~~~~~l~~~p~~i~~~~~~~~~~~~~~~~~~V~sl~~~p~d~ 189 (1043)
+.++..+ +.|++++|+|++.++++++.++.+++|+.... ... .. ..+...|.++.++|+
T Consensus 91 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~--~~~----~~------------~~~~~~v~~~~~~~~-- 150 (577)
T 2ymu_A 91 LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQ----TL------------TGHSSSVWGVAFSPD-- 150 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCC--EEE----EE------------CCCSSCEEEEEECTT--
T ss_pred EEEEECCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCC--EEE----EC------------CCCCCCEEEEEEECC--
T ss_conf 9999789998899999899998999807983352023552--001----10------------477774355542037--
Q ss_pred CCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf 99799999798699998648959999277665334662369999998754576678888898499998359999899998
Q 001621 190 GNRVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDSPSEGDSTFLEGISEHQPEEKEISALCWASSSGSILAVGY 269 (1043)
Q Consensus 190 g~~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~V~sl~w~sp~g~~i~tg~ 269 (1043)
+..++.+..++.+.+|+........... +...|.++.|. |++..+++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~v~~~~~~-~~~~~l~~~~ 199 (577)
T 2ymu_A 151 GQTIASASDDKTVKLWNRNGQLLQTLTG------------------------------HSSSVWGVAFS-PDGQTIASAS 199 (577)
T ss_dssp SSCEEEEETTSEEEEECTTSCEEEEEEC------------------------------CSSCEEEEEEC-TTSSCEEEEE
T ss_pred CCCCEECCCCCCEECCCCCEEEEEECCC------------------------------CCCCEEEEEEC-CCCCEEEEEC
T ss_conf 7632002555310000000000000268------------------------------77635665416-9977899985
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECC
Q ss_conf 58919999099998546656887785200003655678626999930278878898854999628789996439999848
Q 001621 270 IDGDILLWNTSTTASTKGQQTGSRNNVVKLELSSAERRLPVIVLHWSTNKESRSNIDGRLFVYGGDEIGSEEVLTVLSLE 349 (1043)
Q Consensus 270 ~DG~I~iWd~~tg~~~~~~~~~~~~~~~~l~l~~~~~~~~i~~l~w~~~~~~~~~~~~~llv~gg~~~~~~~~ltv~~l~ 349 (1043)
.||.|++|+.. ++... .+. .+..+|..+.| ++ ++.++++++.+ ..+.+|+..
T Consensus 200 ~d~~v~~w~~~-~~~~~-----------~~~----~~~~~v~~~~~-------s~-dg~~l~~~~~d----~~i~~w~~~ 251 (577)
T 2ymu_A 200 DDKTVKLWNRN-GQLLQ-----------TLT----GHSSSVRGVAF-------SP-DGQTIASASDD----KTVKLWNRN 251 (577)
T ss_dssp TTSEEEEECTT-SCEEE-----------EEE----CCSSCEEEEEE-------CT-TSSCEEEEETT----SCEEEECTT
T ss_pred CCCEEEEEECC-CCEEE-----------EEE----CCCCCEEEEEE-------CC-CCCEEEEEECC----CEEEEEECC
T ss_conf 99989999499-96899-----------994----68898899999-------79-99999999189----989999599
Q ss_pred CCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 64345442021368516998420899901489888789407999838983779626430001025899999898457732
Q 001621 350 WSSGMENLRCVSRVDITLTGSFADMILLSSAGATVGNHKADLFVLTSPGQLHFYDNASLTTLLSQQEKKPSVCPVEFPGV 429 (1043)
Q Consensus 350 ~~~~~~~~~~~~~~~l~~~~~v~d~~~~p~~s~~g~~~~~~l~vl~~~G~l~~~d~~~~~~~l~~~~~~~~~~~~~~p~~ 429 (1043)
... . .....+...+..+.+.|... .++....++.+.+|+... .....
T Consensus 252 ~~~-------~-~~~~~~~~~v~~v~~~~d~~--------~l~~~~~d~~i~~w~~~~-----------------~~~~~ 298 (577)
T 2ymu_A 252 GQL-------L-QTLTGHSSSVNGVAFRPDGQ--------TIASASDDKTVKLWNRNG-----------------QLLQT 298 (577)
T ss_dssp SCE-------E-EEECCCSSCEEEEEECTTSS--------EEEEEETTSCEEEEETTS-----------------CEEEE
T ss_pred CCE-------E-EEEECCCCCEEEEEECCCCC--------EEEEEECCCEEEEEECCC-----------------CEEEE
T ss_conf 979-------9-99806889879999968999--------999995999799994899-----------------58999
Q ss_pred CCCCCCCCEEEEEEECCC------CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 577899633999996268------98744457689871134799876676544334898987776556888819999958
Q 001621 430 IPISDPIMTVAEFMLLPF------GGHSSKGLSEIATFTKLHSSHTQAGHIKWPLSGGVPSPVPITKCHSVDRVYLAGYH 503 (1043)
Q Consensus 430 l~~~~~~it~~~~~~~~~------~~~~~~~w~~~~~~~~~~~~~~~~~~~~~pl~Gg~~~~~~~~~~s~~~~~l~Tg~~ 503 (1043)
+..|...++++++.+++. .++.+++|+.. .. .+ ..+.++...+..+ +++|+++.+++|+.
T Consensus 299 ~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~--~~-----~~------~~~~~~~~~v~~~-~~s~~g~~l~~~~~ 364 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN--GQ-----HL------QTLTGHSSSVWGV-AFSPDGQTIASASD 364 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--SC-----EE------EEECCCSSCEEEE-EECTTSSEEEEEET
T ss_pred EECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC--CC-----EE------EEEECCCCCEEEE-EECCCCCEEEEEEC
T ss_conf 70688976999999999999999699959999699--97-----25------7874788977999-99899999999969
Q ss_pred CCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCC
Q ss_conf 98499972899972344432051335775299988479999159991999940751999996378765310121058771
Q 001621 504 DGSVRIWDATYPVFKLICALDAEVQGIEVAGSRAPVSTLSFCFINSSLAVGNEFGLVYIYNLNGSLDAKNFLFVLETKSE 583 (1043)
Q Consensus 504 DgtVriWD~~~~~l~~~~~l~~~~~~i~~~~~~~~V~~l~fspd~~~La~g~~dG~V~i~~~~~~~~~~~~~f~~~~~~~ 583 (1043)
||+|++||..... +. .+.+|..+|++++|+|++..|++++.||.|++|+....
T Consensus 365 dg~v~~~~~~~~~---~~---------~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~--------------- 417 (577)
T 2ymu_A 365 DKTVKLWNRNGQL---LQ---------TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ--------------- 417 (577)
T ss_dssp TSEEEEEETTCCE---EE---------EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCC---------------
T ss_pred CCEEEEECCCCCE---EE---------EECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC---------------
T ss_conf 9989999089978---99---------85278897489999899999999949998999969997---------------
Q ss_pred EEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCC
Q ss_conf 33323798511568721799888999985999599999489809999758754999950689999883999998312776
Q 001621 584 VHALPEGKISLCRAVFSLVNSPVRALQFTSSGAKLAVGFECGRVAVLDMNLLSVLFFTDDISGSSSPIISMTWTEFKNTH 663 (1043)
Q Consensus 584 ~~~~~~~~~~~~~~~l~~h~~~Vtala~sp~g~~lA~Gs~dG~V~iwD~~~~~~i~~~~~~~~~~~~V~sl~fs~~~~~~ 663 (1043)
....+..|..+|++++|+|++++||+++.|++|++||+.+ ..+.... .+..+|++++|+++
T Consensus 418 -----------~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~~~---~~~~~v~~~~~spd---- 478 (577)
T 2ymu_A 418 -----------LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQTLT---GHSSSVRGVAFSPD---- 478 (577)
T ss_dssp -----------EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEEEE---CCSSCEEEEEECTT----
T ss_pred -----------EEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCC-CEEEEEC---CCCCCEEEEEECCC----
T ss_conf -----------8989628899757999989999999993999899997999-8899972---78997789999699----
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCEE
Q ss_conf 55689999889888898742999961682199990899972424777868773148899824078886076458986202
Q 001621 664 SLAKNPNHSEREVPVNPAEEVIIVLFKDAKISIVGGSSENMISSSPWHLKKKVIAISMEVIDSVRLYSRKSVIQGNNKTV 743 (1043)
Q Consensus 664 ~~~~~p~~~~~~~~~~~~~~~l~~gt~dg~i~v~d~~~g~~i~~~~~~~~~~~~a~~~~i~~~irl~~~~~~~~g~~k~~ 743 (1043)
+.+|++++.|+.|.+||. +++.+...
T Consensus 479 ------------------~~~las~~~d~~i~iw~~-~~~~~~~~----------------------------------- 504 (577)
T 2ymu_A 479 ------------------GQTIASASDDKTVKLWNR-NGQLLQTL----------------------------------- 504 (577)
T ss_dssp ------------------SCEEEEEETTSEEEEEET-TSCEEEEE-----------------------------------
T ss_pred ------------------CCEEEEEECCCEEEEECC-CCCEEEEE-----------------------------------
T ss_conf ------------------999999919897999939-99789998-----------------------------------
Q ss_pred EECCCCCCCEEEEEEEECCEEEEEEEEEEECCEEEEECCCHHHHHHHCCCCEEEEECCCCCCEEEEEC-CCCEEEECCCE
Q ss_conf 10056876114994530650379999975080999818981244440234212210067774014724-99499991533
Q 001621 744 QKVKHKNRCCWASTIEKDEKVCGLLLLFQTGAVQIRSLPDLELVMESSLMSILRWNFKANMDKTISAD-NGQITLANGSE 822 (1043)
Q Consensus 744 ~k~~~~~~c~~~~~~~~~~~g~~Lv~~~~dG~i~i~slp~l~~~~~~~l~~~~~~~~~~~~~~~i~~s-dg~~~l~~g~e 822 (1043)
..+...+..+.+++++..|+++..||.|++|+++. +.+.... . +.+.+..+++| ||+.+++.|.|
T Consensus 505 -----~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~-~~~~~~~--~------h~~~v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 505 -----TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLT--G------HSSSVWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp -----ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-CEEEEEE--C------CSSCEEEEEECTTSSCEEEEETT
T ss_pred -----ECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC-CEEEEEC--C------CCCCEEEEEECCCCCEEEEEECC
T ss_conf -----67999989999918999999998969999996999-7898971--8------88887899996899999999089
Q ss_pred E
Q ss_conf 5
Q 001621 823 V 823 (1043)
Q Consensus 823 ~ 823 (1043)
.
T Consensus 571 ~ 571 (577)
T 2ymu_A 571 K 571 (577)
T ss_dssp S
T ss_pred C
T ss_conf 9
No 3
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=400.49 Aligned_cols=611 Identities=10% Similarity=0.075 Sum_probs=373.2
Q ss_pred EECCCCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCCEEEEECC-CCCCEEEEEEECCCCEEEEEECCCCEEEEECCC
Q ss_conf 2012679883999994899989999969929999389825998369-998959999964998999997899399998899
Q 001621 29 AVHYGIPATASILAFDHIQRLLAIATLDGRIKVIGGDGIEGLLISP-SQLPYKNLEFLQNQGFLISITNDNEIQVWSLES 107 (1043)
Q Consensus 29 ~~~~G~~~~v~~lafsp~~~lLAvgt~DG~I~v~~~~~~~~~~~~~-~~~~V~~l~F~~d~~~Lis~s~d~~I~vWdl~t 107 (1043)
....||.+.|++++|+|++++||+|+.||.|++|+....+.+..+. +...|.+++|+|++.+|++++.|+.|++||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCC
T ss_conf 78716666489999879999899994889499999899978887606777789999926999899981899599987799
Q ss_pred CCEEEEEECC-CCEEEEEEEC--CCCEEEEEECCCCEEEEEEECCCCEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 9355774069-9789999907--999999993799699999847999276302551543100013789889889699980
Q 001621 108 RSLACCLKWE-SNITAFSVIS--GSHFMYIGDENGLMSVIKYDADEGKLFQLPYNISADALSEKAGFPLLSHQPVVGVLP 184 (1043)
Q Consensus 108 ~~~l~~~~~~-~~Vt~i~~~p--~~~~l~vG~~dG~I~vw~~d~~~~~l~~~p~~i~~~~~~~~~~~~~~~~~~V~sl~~ 184 (1043)
++++.++..+ ..|+++.|+| +..++++|+.||.|++|++.... .. ..+ ..|..+|.++.|
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~---~~~------------~~h~~~v~~~~~ 751 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CR---NTM------------FGHTNSVNHCRF 751 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EE---EEE------------CCCSSCEEEEEE
T ss_pred CCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCC--HH---HEE------------CCCCCCEEEEEE
T ss_conf 9368999589973799998408996599998089709999899963--42---201------------277797889999
Q ss_pred CCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE
Q ss_conf 67999997999997986999986489599992776653346623699999987545766788888984999983599998
Q 001621 185 HPNSSGNRVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDSPSEGDSTFLEGISEHQPEEKEISALCWASSSGSI 264 (1043)
Q Consensus 185 ~p~d~g~~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~V~sl~w~sp~g~~ 264 (1043)
+|+ +..+++++.||.|++||+.+++....+.......... .+. ......+.+++|+ |+|..
T Consensus 752 sp~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-------~~~---------~~~~~~v~~~~~s-~dg~~ 812 (1249)
T 3sfz_A 752 SPD--DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSE-------DPP---------EDVEVIVKCCSWS-ADGDK 812 (1249)
T ss_dssp CSS--TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC------------------------CCCCCBCCCCBC-TTSSE
T ss_pred ECC--CCEEEEEECCCEEEEEECCCCCCCCEECCCCCCCCCC-------CCC---------CCCCCEEEEEEEC-CCCCE
T ss_conf 259--9989999789859999688886553020232102467-------764---------4565017999997-89988
Q ss_pred EEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEE
Q ss_conf 99998589199990999985466568877852000036556786269999302788788988549996287899964399
Q 001621 265 LAVGYIDGDILLWNTSTTASTKGQQTGSRNNVVKLELSSAERRLPVIVLHWSTNKESRSNIDGRLFVYGGDEIGSEEVLT 344 (1043)
Q Consensus 265 i~tg~~DG~I~iWd~~tg~~~~~~~~~~~~~~~~l~l~~~~~~~~i~~l~w~~~~~~~~~~~~~llv~gg~~~~~~~~lt 344 (1043)
+++++ ++.+.+|++.++....... ..+..++..+.| +| ++.++++++.+ ..+.
T Consensus 813 l~~~~-~~~v~~~d~~~~~~~~~~~--------------~~~~~~v~~~~~-------sp-~~~~l~~~~~d----g~v~ 865 (1249)
T 3sfz_A 813 IIVAA-KNKVLLFDIHTSGLLAEIH--------------TGHHSTIQYCDF-------SP-YDHLAVIALSQ----YCVE 865 (1249)
T ss_dssp EEEEE-TTEEEEEETTTCCEEEEEE--------------CSSSSCCCEEEE-------CS-STTEEEEECSS----SCEE
T ss_pred EEEEC-CCCEEEEEECCCCCEEEEC--------------CCCCCCEEEEEE-------CC-CCCEEEEEECC----CEEE
T ss_conf 99975-8959999956897235774--------------787776079998-------27-88889999479----8699
Q ss_pred EEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCEEECCCCCCCCCCCCC
Q ss_conf 99848643454420213685169984208999014898887894079998389837796264300010258999998984
Q 001621 345 VLSLEWSSGMENLRCVSRVDITLTGSFADMILLSSAGATVGNHKADLFVLTSPGQLHFYDNASLTTLLSQQEKKPSVCPV 424 (1043)
Q Consensus 345 v~~l~~~~~~~~~~~~~~~~l~~~~~v~d~~~~p~~s~~g~~~~~~l~vl~~~G~l~~~d~~~~~~~l~~~~~~~~~~~~ 424 (1043)
+|++.... +... ...+.+.+.++.+.|... .++..+.+|.+.+|+......... ...
T Consensus 866 vwd~~~~~------~~~~-~~~h~~~v~~v~~spdg~--------~l~s~s~dg~v~vw~~~~~~~~~~--------~~~ 922 (1249)
T 3sfz_A 866 LWNIDSRL------KVAD-CRGHLSWVHGVMFSPDGS--------SFLTASDDQTIRVWETKKVCKNSA--------IVL 922 (1249)
T ss_dssp EEETTTTE------EEEE-ECCCSSCEEEEEECTTSS--------EEEEEETTSCEEEEEHHHHHSCCS--------SSE
T ss_pred EEECCCCC------EEEE-CCCCCCCEEEEEECCCCC--------EEEEEECCCEEEEEECCCCCEEEE--------ECC
T ss_conf 99867895------6532-278766568999989999--------899995897289887466520102--------113
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 57732577899633999996268987444576898711347998766765443348989877765568888199999589
Q 001621 425 EFPGVIPISDPIMTVAEFMLLPFGGHSSKGLSEIATFTKLHSSHTQAGHIKWPLSGGVPSPVPITKCHSVDRVYLAGYHD 504 (1043)
Q Consensus 425 ~~p~~l~~~~~~it~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~pl~Gg~~~~~~~~~~s~~~~~l~Tg~~D 504 (1043)
..........+....... .... ....+.. .. . . .. ... .....++ .++|+++.+++|+.|
T Consensus 923 ~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~----~~--~-~-----~~--~~~-~~~i~~~-~~sp~g~~l~~g~~~ 982 (1249)
T 3sfz_A 923 KQEIDVVFQENETMVLAV--DNIR--GLQLIAG----KT--G-Q-----ID--YLP-EAQVSCC-CLSPHLEYVAFGDED 982 (1249)
T ss_dssp EEEEEEEEETTEEEEEEE--ESSS--SEEEEEE----SS--C-C-----EE--EEC-CSCEEEE-EECTTSSEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEE--CCCC--CEEEEEC----CC--C-E-----EE--ECC-CCCEEEE-EECCCCCEEEEECCC
T ss_conf 310368975998689981--3776--2489844----76--5-0-----89--725-6727899-995899779998699
Q ss_pred CCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCE
Q ss_conf 84999728999723444320513357752999884799991599919999407519999963787653101210587713
Q 001621 505 GSVRIWDATYPVFKLICALDAEVQGIEVAGSRAPVSTLSFCFINSSLAVGNEFGLVYIYNLNGSLDAKNFLFVLETKSEV 584 (1043)
Q Consensus 505 gtVriWD~~~~~l~~~~~l~~~~~~i~~~~~~~~V~~l~fspd~~~La~g~~dG~V~i~~~~~~~~~~~~~f~~~~~~~~ 584 (1043)
|.|++||...+... . .+.+|..+|++++|+|++..|++++.||.|++|++..+..
T Consensus 983 g~i~i~d~~~~~~~--~---------~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~-------------- 1037 (1249)
T 3sfz_A 983 GAIKIIELPNNRVF--S---------SGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDY-------------- 1037 (1249)
T ss_dssp SCCEEEETTTTSCE--E---------ECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEE--------------
T ss_pred CCEEEEECCCCCEE--E---------ECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCE--------------
T ss_conf 98899975787234--4---------3036777168999989999899986998799998799966--------------
Q ss_pred EEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCC
Q ss_conf 33237985115687217998889999859995999994898099997587549999506899998839999983127765
Q 001621 585 HALPEGKISLCRAVFSLVNSPVRALQFTSSGAKLAVGFECGRVAVLDMNLLSVLFFTDDISGSSSPIISMTWTEFKNTHS 664 (1043)
Q Consensus 585 ~~~~~~~~~~~~~~l~~h~~~Vtala~sp~g~~lA~Gs~dG~V~iwD~~~~~~i~~~~~~~~~~~~V~sl~fs~~~~~~~ 664 (1043)
..+..|...|++++|+|++ .+++++.||+|++||+.++..+..... +..+|++++|++++
T Consensus 1038 ------------~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~---~~~~v~~~~~s~d~---- 1097 (1249)
T 3sfz_A 1038 ------------VFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTC---HQGTVLSCAISSDA---- 1097 (1249)
T ss_dssp ------------ECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEEC---CSSCCCCEEECSSS----
T ss_pred ------------EEEECCCCCEEEEEECCCC-CEEEEECCCCEEEEECCCCCEEEEECC---CCCCEEEEEECCCC----
T ss_conf ------------8985278738999990899-589997889689988898865588746---68848999998999----
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCC----------CCCCCCCEEEEEEEECCEEEEEECC
Q ss_conf 568999988988889874299996168219999089997242477----------7868773148899824078886076
Q 001621 665 LAKNPNHSEREVPVNPAEEVIIVLFKDAKISIVGGSSENMISSSP----------WHLKKKVIAISMEVIDSVRLYSRKS 734 (1043)
Q Consensus 665 ~~~~p~~~~~~~~~~~~~~~l~~gt~dg~i~v~d~~~g~~i~~~~----------~~~~~~~~a~~~~i~~~irl~~~~~ 734 (1043)
.++++++.|+.|.+||..++..+.... ++++....+ +......+++|+..+
T Consensus 1098 ------------------~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~la-t~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1098 ------------------TKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA-TGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp ------------------SSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEE-EEETTSCCCEEESSS
T ss_pred ------------------CEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEE-EEECCCEEEEEECCC
T ss_conf ------------------9899984999489987898500125506877679999979999899-982899799998899
Q ss_pred CCCCCCCEEE----E-CCCCCCCEEEEEEEECCEEEEEEEEEEECCEEEEECCCHHHHHHHCCCCEEEEECCCCCCEEEE
Q ss_conf 4589862021----0-0568761149945306503799999750809998189812444402342122100677740147
Q 001621 735 VIQGNNKTVQ----K-VKHKNRCCWASTIEKDEKVCGLLLLFQTGAVQIRSLPDLELVMESSLMSILRWNFKANMDKTIS 809 (1043)
Q Consensus 735 ~~~g~~k~~~----k-~~~~~~c~~~~~~~~~~~g~~Lv~~~~dG~i~i~slp~l~~~~~~~l~~~~~~~~~~~~~~~i~ 809 (1043)
|...... . .....+..++..+.+++++..|+++. |.|++|++.+.+.+..+.. ....+..++
T Consensus 1159 ---~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~--------~~~~i~~~~ 1225 (1249)
T 3sfz_A 1159 ---GQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYT--------NGTNLKKIH 1225 (1249)
T ss_dssp ---SCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCC--------SSCCCCCCE
T ss_pred ---CCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEECC--CEEEEEECCCCCEEEEEEC--------CCCCCCEEE
T ss_conf ---945788514444421025674289999978999899779--8599989888950046400--------477532799
Q ss_pred EC-CCCEEEECCCE
Q ss_conf 24-99499991533
Q 001621 810 AD-NGQITLANGSE 822 (1043)
Q Consensus 810 ~s-dg~~~l~~g~e 822 (1043)
+| ||+.+++.+.+
T Consensus 1226 ~s~dg~~l~~~~~d 1239 (1249)
T 3sfz_A 1226 VSPDFRTYVTVDNL 1239 (1249)
T ss_dssp ECSSSCCEEEECTT
T ss_pred ECCCCCEEEEECCC
T ss_conf 97898779996688
No 4
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=386.49 Aligned_cols=553 Identities=12% Similarity=0.098 Sum_probs=361.5
Q ss_pred ECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECC-CCEEEEEEECCCCEEEEEECCCCEEEEEEECCC
Q ss_conf 3699989599999649989999978993999988999355774069-978999990799999999379969999984799
Q 001621 72 ISPSQLPYKNLEFLQNQGFLISITNDNEIQVWSLESRSLACCLKWE-SNITAFSVISGSHFMYIGDENGLMSVIKYDADE 150 (1043)
Q Consensus 72 ~~~~~~~V~~l~F~~d~~~Lis~s~d~~I~vWdl~t~~~l~~~~~~-~~Vt~i~~~p~~~~l~vG~~dG~I~vw~~d~~~ 150 (1043)
...|...|.+++|++++.+|++++.|+.|++||+.+++.+.++..+ +.|++++|+|+++++++|+.||.|++|++...
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~- 689 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG- 689 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-
T ss_pred EECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCC-
T ss_conf 7166664899998799998999948894999998999788876067777899999269998999818995999877999-
Q ss_pred CEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 92763025515431000137898898896999806799999799999798699998648959999277665334662369
Q 001621 151 GKLFQLPYNISADALSEKAGFPLLSHQPVVGVLPHPNSSGNRVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDS 230 (1043)
Q Consensus 151 ~~l~~~p~~i~~~~~~~~~~~~~~~~~~V~sl~~~p~d~g~~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~ 230 (1043)
+.. ..+ ..|..+|.++.|+|..++..+++++.||.|.+||+.+++.+..+.+
T Consensus 690 -~~~---~~~------------~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~------------ 741 (1249)
T 3sfz_A 690 -KLV---HTY------------DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG------------ 741 (1249)
T ss_dssp -CEE---EEE------------ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC------------
T ss_pred -CEE---EEE------------CCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCHHHEECC------------
T ss_conf -368---999------------5899737999984089965999980897099998999634220127------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCE
Q ss_conf 99999875457667888889849999835999989999858919999099998546656887785200003655678626
Q 001621 231 PSEGDSTFLEGISEHQPEEKEISALCWASSSGSILAVGYIDGDILLWNTSTTASTKGQQTGSRNNVVKLELSSAERRLPV 310 (1043)
Q Consensus 231 ~~~~~~~~g~~~~~~~~~~~~V~sl~w~sp~g~~i~tg~~DG~I~iWd~~tg~~~~~~~~~~~~~~~~l~l~~~~~~~~i 310 (1043)
|...|++++|+ |++..+++++.||.|++||+.++........... ..............+
T Consensus 742 -----------------h~~~v~~~~~s-p~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v 801 (1249)
T 3sfz_A 742 -----------------HTNSVNHCRFS-PDDELLASCSADGTLRLWDVRSANERKSINVKRF--FLSSEDPPEDVEVIV 801 (1249)
T ss_dssp -----------------CSSCEEEEEEC-SSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCC--C--------CCCCCB
T ss_pred -----------------CCCCEEEEEEE-CCCCEEEEEECCCEEEEEECCCCCCCCEECCCCC--CCCCCCCCCCCCCEE
T ss_conf -----------------77978899992-5999899997898599996888865530202321--024677644565017
Q ss_pred EEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCE
Q ss_conf 99993027887889885499962878999643999984864345442021368516998420899901489888789407
Q 001621 311 IVLHWSTNKESRSNIDGRLFVYGGDEIGSEEVLTVLSLEWSSGMENLRCVSRVDITLTGSFADMILLSSAGATVGNHKAD 390 (1043)
Q Consensus 311 ~~l~w~~~~~~~~~~~~~llv~gg~~~~~~~~ltv~~l~~~~~~~~~~~~~~~~l~~~~~v~d~~~~p~~s~~g~~~~~~ 390 (1043)
..+.| ++++..+ +.+++ ..+.+|++.... ....+...+.+.+..+.+.|... .
T Consensus 802 ~~~~~-------s~dg~~l-~~~~~-----~~v~~~d~~~~~------~~~~~~~~~~~~v~~~~~sp~~~--------~ 854 (1249)
T 3sfz_A 802 KCCSW-------SADGDKI-IVAAK-----NKVLLFDIHTSG------LLAEIHTGHHSTIQYCDFSPYDH--------L 854 (1249)
T ss_dssp CCCCB-------CTTSSEE-EEEET-----TEEEEEETTTCC------EEEEEECSSSSCCCEEEECSSTT--------E
T ss_pred EEEEE-------CCCCCEE-EEECC-----CCEEEEEECCCC------CEEEECCCCCCCEEEEEECCCCC--------E
T ss_conf 99999-------7899889-99758-----959999956897------23577478777607999827888--------8
Q ss_pred EEEECCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 99983898377962643000102589999989845773257789963399999626898744457689871134799876
Q 001621 391 LFVLTSPGQLHFYDNASLTTLLSQQEKKPSVCPVEFPGVIPISDPIMTVAEFMLLPFGGHSSKGLSEIATFTKLHSSHTQ 470 (1043)
Q Consensus 391 l~vl~~~G~l~~~d~~~~~~~l~~~~~~~~~~~~~~p~~l~~~~~~it~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 470 (1043)
+++...+|.+.+||.... .....+
T Consensus 855 l~~~~~dg~v~vwd~~~~----------------~~~~~~---------------------------------------- 878 (1249)
T 3sfz_A 855 AVIALSQYCVELWNIDSR----------------LKVADC---------------------------------------- 878 (1249)
T ss_dssp EEEECSSSCEEEEETTTT----------------EEEEEE----------------------------------------
T ss_pred EEEEECCCEEEEEECCCC----------------CEEEEC----------------------------------------
T ss_conf 999947986999986789----------------565322----------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCE----EEE-----------------------EE
Q ss_conf 676544334898987776556888819999958984999728999723----444-----------------------32
Q 001621 471 AGHIKWPLSGGVPSPVPITKCHSVDRVYLAGYHDGSVRIWDATYPVFK----LIC-----------------------AL 523 (1043)
Q Consensus 471 ~~~~~~pl~Gg~~~~~~~~~~s~~~~~l~Tg~~DgtVriWD~~~~~l~----~~~-----------------------~l 523 (1043)
.++...+..+ .++++++.+++++.||+|++||....... ... ..
T Consensus 879 --------~~h~~~v~~v-~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1249)
T 3sfz_A 879 --------RGHLSWVHGV-MFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLI 949 (1249)
T ss_dssp --------CCCSSCEEEE-EECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEE
T ss_pred --------CCCCCCEEEE-EECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEE
T ss_conf --------7876656899-9989999899995897289887466520102113310368975998689981377624898
Q ss_pred CCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEECCCC
Q ss_conf 05133577529998847999915999199994075199999637876531012105877133323798511568721799
Q 001621 524 DAEVQGIEVAGSRAPVSTLSFCFINSSLAVGNEFGLVYIYNLNGSLDAKNFLFVLETKSEVHALPEGKISLCRAVFSLVN 603 (1043)
Q Consensus 524 ~~~~~~i~~~~~~~~V~~l~fspd~~~La~g~~dG~V~i~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~h~ 603 (1043)
......+ ...+...+++++|+|++..+++|+.+|.|++|++...... ..+..|.
T Consensus 950 ~~~~~~~-~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~-------------------------~~~~~h~ 1003 (1249)
T 3sfz_A 950 AGKTGQI-DYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF-------------------------SSGVGHK 1003 (1249)
T ss_dssp EESSCCE-EEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCE-------------------------EECCCCS
T ss_pred ECCCCEE-EECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEE-------------------------EECCCCC
T ss_conf 4476508-9725672789999589977999869998899975787234-------------------------4303677
Q ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 88899998599959999948980999975875499995068999988399999831277655689999889888898742
Q 001621 604 SPVRALQFTSSGAKLAVGFECGRVAVLDMNLLSVLFFTDDISGSSSPIISMTWTEFKNTHSLAKNPNHSEREVPVNPAEE 683 (1043)
Q Consensus 604 ~~Vtala~sp~g~~lA~Gs~dG~V~iwD~~~~~~i~~~~~~~~~~~~V~sl~fs~~~~~~~~~~~p~~~~~~~~~~~~~~ 683 (1043)
.+|++++|+|+|+++++|+.||+|++||+.++..+... .+...|.++.|++. .
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~~~v~~~~~~~~-----------------------~ 1056 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ----AHQETVKDFRLLQD-----------------------S 1056 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB----CCSSCEEEEEECSS-----------------------S
T ss_pred CCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEE----CCCCCEEEEEECCC-----------------------C
T ss_conf 71689999899998999869987999987999668985----27873899999089-----------------------9
Q ss_pred EEEEECCCCEEEEECCCCCCEEECCC----------CCCCCCCEEEEEEEECCEEEEEECCCCCCCCCEEEECCCCCCCE
Q ss_conf 99996168219999089997242477----------78687731488998240788860764589862021005687611
Q 001621 684 VIIVLFKDAKISIVGGSSENMISSSP----------WHLKKKVIAISMEVIDSVRLYSRKSVIQGNNKTVQKVKHKNRCC 753 (1043)
Q Consensus 684 ~l~~gt~dg~i~v~d~~~g~~i~~~~----------~~~~~~~~a~~~~i~~~irl~~~~~~~~g~~k~~~k~~~~~~c~ 753 (1043)
.+++++.|+.|.+||..+++.+.... ++++....+. ..-...+++|+..+ +... . .+..+..
T Consensus 1057 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s-~s~d~~v~iwd~~~---~~~~--~--~l~~h~~ 1128 (1249)
T 3sfz_A 1057 RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSS-TSADKTAKIWSFDL---LSPL--H--ELKGHNG 1128 (1249)
T ss_dssp EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEE-ECCSSCCCEECSSS---SSCS--B--CCCCCSS
T ss_pred CEEEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEE-ECCCCCEEEEECCC---CCEE--E--EECCCCC
T ss_conf 5899978896899888988655887466884899999899998999-84999489987898---5001--2--5506877
Q ss_pred EEEEEEECCEEEEEEEEEEECCEEEEECCCHHHHHHHCCCC-EEEEECCCCCCEEEEEC-CCCEEEECCCEEEEE
Q ss_conf 49945306503799999750809998189812444402342-12210067774014724-994999915335999
Q 001621 754 WASTIEKDEKVCGLLLLFQTGAVQIRSLPDLELVMESSLMS-ILRWNFKANMDKTISAD-NGQITLANGSEVAFV 826 (1043)
Q Consensus 754 ~~~~~~~~~~g~~Lv~~~~dG~i~i~slp~l~~~~~~~l~~-~~~~~~~~~~~~~i~~s-dg~~~l~~g~e~~~~ 826 (1043)
.+..+..++++..|+++..||.|++|++.+.+.+....-.. .-.+....+.+..+++| ||+.+++.+..+.+.
T Consensus 1129 ~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vw 1203 (1249)
T 3sfz_A 1129 CVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWW 1203 (1249)
T ss_dssp CEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEEEB
T ss_pred CEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCEEEEE
T ss_conf 679999979999899982899799998899945788514444421025674289999978999899779859998
No 5
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=379.57 Aligned_cols=553 Identities=11% Similarity=0.082 Sum_probs=359.3
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCCEEEEE-CCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCC--
Q ss_conf 6798839999948999899999699299993898259983-6999895999996499899999789939999889993--
Q 001621 33 GIPATASILAFDHIQRLLAIATLDGRIKVIGGDGIEGLLI-SPSQLPYKNLEFLQNQGFLISITNDNEIQVWSLESRS-- 109 (1043)
Q Consensus 33 G~~~~v~~lafsp~~~lLAvgt~DG~I~v~~~~~~~~~~~-~~~~~~V~~l~F~~d~~~Lis~s~d~~I~vWdl~t~~-- 109 (1043)
...+.+.+++|+|++++||+++ ++.|++|+....+.... ..|...|++++|+|++.+|++++.|++|++||+.+++
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~ 94 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI 94 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC
T ss_pred CCCCCEEEEEECCCCCEEEECC-CCEEEEECCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCE
T ss_conf 4068236976679999799679-997999457872427376589986599999999968999948997899489898415
Q ss_pred EEEEEEC-CCCEEEEEEECCCCEEEEEECC----CCEEEEEEECCCCEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 5577406-9978999990799999999379----9699999847999276302551543100013789889889699980
Q 001621 110 LACCLKW-ESNITAFSVISGSHFMYIGDEN----GLMSVIKYDADEGKLFQLPYNISADALSEKAGFPLLSHQPVVGVLP 184 (1043)
Q Consensus 110 ~l~~~~~-~~~Vt~i~~~p~~~~l~vG~~d----G~I~vw~~d~~~~~l~~~p~~i~~~~~~~~~~~~~~~~~~V~sl~~ 184 (1043)
+..++.. .+.|++++|+|++++++++.++ +.|++| +... .. ....+|...|.++.|
T Consensus 95 ~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~w--d~~~--~~---------------~~l~gh~~~v~~v~f 155 (611)
T 1nr0_A 95 LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLF--DTGT--SN---------------GNLTGQARAMNSVDF 155 (611)
T ss_dssp EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEET--TTCC--BC---------------BCCCCCSSCEEEEEE
T ss_pred EEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE--ECCC--CC---------------CEECCCCCCCEEEEE
T ss_conf 6676225578448999899999799998997736699996--3899--76---------------325478898369998
Q ss_pred CCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE
Q ss_conf 67999997999997986999986489599992776653346623699999987545766788888984999983599998
Q 001621 185 HPNSSGNRVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDSPSEGDSTFLEGISEHQPEEKEISALCWASSSGSI 264 (1043)
Q Consensus 185 ~p~d~g~~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~V~sl~w~sp~g~~ 264 (1043)
+|+. ..++++++.|++|++||....+....+.+ |...|.+++|+ |+|.+
T Consensus 156 ~p~~-~~~l~s~s~D~~v~lwd~~~~~~~~~l~~-----------------------------H~~~V~~v~fs-pdg~~ 204 (611)
T 1nr0_A 156 KPSR-PFRIISGSDDNTVAIFEGPPFKFKSTFGE-----------------------------HTKFVHSVRYN-PDGSL 204 (611)
T ss_dssp CSSS-SCEEEEEETTSCEEEEETTTBEEEEEECC-----------------------------CSSCEEEEEEC-TTSSE
T ss_pred CCCC-CEEEEEEECCCEEEEEECCCCEEEEEECC-----------------------------CCCCEEEEEEC-CCCCE
T ss_conf 8999-82999992898099997999757665200-----------------------------25716999997-99998
Q ss_pred EEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEE
Q ss_conf 99998589199990999985466568877852000036556786269999302788788988549996287899964399
Q 001621 265 LAVGYIDGDILLWNTSTTASTKGQQTGSRNNVVKLELSSAERRLPVIVLHWSTNKESRSNIDGRLFVYGGDEIGSEEVLT 344 (1043)
Q Consensus 265 i~tg~~DG~I~iWd~~tg~~~~~~~~~~~~~~~~l~l~~~~~~~~i~~l~w~~~~~~~~~~~~~llv~gg~~~~~~~~lt 344 (1043)
|++++.|++|++||+.++......... .+....|..+|..+.|+ | ++.++++++.| ..+.
T Consensus 205 las~s~D~~i~lwd~~~g~~~~~~~~~--------~~~~~~h~~~V~~v~~s-------p-dg~~l~s~s~D----~~v~ 264 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTKTGVFEDD--------SLKNVAHSGSVFGLTWS-------P-DGTKIASASAD----KTIK 264 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECBCT--------TSSSCSSSSCEEEEEEC-------T-TSSEEEEEETT----SEEE
T ss_pred EEEEECCCCEEEEECCCCCEEEEECCC--------CCCCCCCCCCEEEEEEC-------C-CCCEEEEEECC----CEEE
T ss_conf 999989991999889998286651366--------43235667878999997-------9-99999999089----8099
Q ss_pred EEECCCCCCCCCCEEEEEEEECCC--CCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCEEECCCCCCCCCCC
Q ss_conf 998486434544202136851699--842089990148988878940799983898377962643000102589999989
Q 001621 345 VLSLEWSSGMENLRCVSRVDITLT--GSFADMILLSSAGATVGNHKADLFVLTSPGQLHFYDNASLTTLLSQQEKKPSVC 422 (1043)
Q Consensus 345 v~~l~~~~~~~~~~~~~~~~l~~~--~~v~d~~~~p~~s~~g~~~~~~l~vl~~~G~l~~~d~~~~~~~l~~~~~~~~~~ 422 (1043)
+|++.... +...+..... .....+.. . ...++....+|.+.+|+....
T Consensus 265 lWd~~~~~------~~~~~~~~~~~~~~~~~~~~--~--------~~~l~s~s~d~~i~~~~~~~~-------------- 314 (611)
T 1nr0_A 265 IWNVATLK------VEKTIPVGTRIEDQQLGIIW--T--------KQALVSISANGFINFVNPELG-------------- 314 (611)
T ss_dssp EEETTTTE------EEEEEECCSSGGGCEEEEEE--C--------SSCEEEEETTCCEEEEETTTT--------------
T ss_pred EEECCCCC------EEEEECCCCCCCCEEEEEEE--C--------CCEEEEEECCCCEEEEECCCC--------------
T ss_conf 99688870------13440478876640689997--3--------887999958996899968899--------------
Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 84577325778996339999962689874445768987113479987667654433489898777655688881999995
Q 001621 423 PVEFPGVIPISDPIMTVAEFMLLPFGGHSSKGLSEIATFTKLHSSHTQAGHIKWPLSGGVPSPVPITKCHSVDRVYLAGY 502 (1043)
Q Consensus 423 ~~~~p~~l~~~~~~it~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~pl~Gg~~~~~~~~~~s~~~~~l~Tg~ 502 (1043)
.... .+.||...+.++ +++|+++.+++++
T Consensus 315 --~~~~------------------------------------------------~~~gh~~~v~~l-~~spdg~~l~s~s 343 (611)
T 1nr0_A 315 --SIDQ------------------------------------------------VRYGHNKAITAL-SSSADGKTLFSAD 343 (611)
T ss_dssp --EEEE------------------------------------------------EECCCSSCEEEE-EECTTSSEEEEEE
T ss_pred --CCCE------------------------------------------------EECCCCCCEEEE-EEECCCCEEEEEE
T ss_conf --7446------------------------------------------------983788888999-9918999899995
Q ss_pred CCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCC---------
Q ss_conf 89849997289997234443205133577529998847999915999199994075199999637876531---------
Q 001621 503 HDGSVRIWDATYPVFKLICALDAEVQGIEVAGSRAPVSTLSFCFINSSLAVGNEFGLVYIYNLNGSLDAKN--------- 573 (1043)
Q Consensus 503 ~DgtVriWD~~~~~l~~~~~l~~~~~~i~~~~~~~~V~~l~fspd~~~La~g~~dG~V~i~~~~~~~~~~~--------- 573 (1043)
.|++||+||+..+... ..+ ..+|...|.+++|++++ .+++++.|+.|++|+.........
T Consensus 344 ~D~~v~~Wd~~~~~~~--~~~--------~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~ 412 (611)
T 1nr0_A 344 AEGHINSWDISTGISN--RVF--------PDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSS 412 (611)
T ss_dssp TTSCEEEEETTTCCEE--ECS--------SCSCSSCEEEEEECTTS-CEEEEETTTEEEEECSSSSSSCTTSCCEEECSS
T ss_pred CCCCEEEEECCCCCEE--EEC--------CCCCCCEEEEEEECCCC-CEEEEECCCCEEEEECCCCCCCCCCEEEEECCC
T ss_conf 8984999978879256--321--------66776507899987899-699998489668954688543565212001489
Q ss_pred ----EEEECCC-------CCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEE
Q ss_conf ----0121058-------77133323798511568721799888999985999599999489809999758754999950
Q 001621 574 ----FLFVLET-------KSEVHALPEGKISLCRAVFSLVNSPVRALQFTSSGAKLAVGFECGRVAVLDMNLLSVLFFTD 642 (1043)
Q Consensus 574 ----~~f~~~~-------~~~~~~~~~~~~~~~~~~l~~h~~~Vtala~sp~g~~lA~Gs~dG~V~iwD~~~~~~i~~~~ 642 (1043)
..|.+++ .+.+..+..+ . ...+ .|...+++++|+|+|++||+|+.||+|++||+.+........
T Consensus 413 ~~~~~~~s~dg~~~~~~~~~~v~~~~~~---~-~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~ 487 (611)
T 1nr0_A 413 QPLGLAVSADGDIAVAACYKHIAIYSHG---K-LTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT 487 (611)
T ss_dssp CEEEEEECTTSSCEEEEESSEEEEEETT---E-EEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEECCCCEEEEEECCEEEEEECC---C-EEEE-ECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEEC
T ss_conf 9707998079969999967639998489---4-3464-068895499992899899996899739999945992224101
Q ss_pred CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCC-CCEEECCCCCCCCCCEEEEE
Q ss_conf 68999988399999831277655689999889888898742999961682199990899-97242477786877314889
Q 001621 643 DISGSSSPIISMTWTEFKNTHSLAKNPNHSEREVPVNPAEEVIIVLFKDAKISIVGGSS-ENMISSSPWHLKKKVIAISM 721 (1043)
Q Consensus 643 ~~~~~~~~V~sl~fs~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~gt~dg~i~v~d~~~-g~~i~~~~~~~~~~~~a~~~ 721 (1043)
..+...|++++|+++ +.+|++++.|+.|.+|+..+ ++++...
T Consensus 488 --~~h~~~v~~v~fspd----------------------g~~las~s~d~~v~~w~~~~~~~~~~~~------------- 530 (611)
T 1nr0_A 488 --IVHPAEITSVAFSNN----------------------GAFLVATDQSRKVIPYSVANNFELAHTN------------- 530 (611)
T ss_dssp --EECSSCEEEEEECTT----------------------SSEEEEEETTSCEEEEEGGGTTEESCCC-------------
T ss_pred --CCCCCCEEEEEECCC----------------------CCEEEEECCCCCEEEEECCCCCCEEEEE-------------
T ss_conf --577886079999899----------------------9989999489989998857787223210-------------
Q ss_pred EEECCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCEEEEEEEEEEECCEEEEECCCHHHHHHHCCCCEEEEECC
Q ss_conf 98240788860764589862021005687611499453065037999997508099981898124444023421221006
Q 001621 722 EVIDSVRLYSRKSVIQGNNKTVQKVKHKNRCCWASTIEKDEKVCGLLLLFQTGAVQIRSLPDLELVMESSLMSILRWNFK 801 (1043)
Q Consensus 722 ~i~~~irl~~~~~~~~g~~k~~~k~~~~~~c~~~~~~~~~~~g~~Lv~~~~dG~i~i~slp~l~~~~~~~l~~~~~~~~~ 801 (1043)
..+ .|...+..+.++++|..|+++..||.|++|++..........+.. +.
T Consensus 531 --------------~~~-----------~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~-----h~ 580 (611)
T 1nr0_A 531 --------------SWT-----------FHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGA-----HA 580 (611)
T ss_dssp --------------CCC-----------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTS-----ST
T ss_pred --------------EEE-----------ECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHHHCC-----CC
T ss_conf --------------264-----------046642589989989979999799729999788755563264446-----76
Q ss_pred CCCCEEEEEC-CCCEEEECCC
Q ss_conf 7774014724-9949999153
Q 001621 802 ANMDKTISAD-NGQITLANGS 821 (1043)
Q Consensus 802 ~~~~~~i~~s-dg~~~l~~g~ 821 (1043)
.+.+..++++ ||+ ++..|.
T Consensus 581 ~~~v~~v~fs~d~~-l~s~~~ 600 (611)
T 1nr0_A 581 MSSVNSVIWLNETT-IVSAGQ 600 (611)
T ss_dssp TSCEEEEEEEETTE-EEEEET
T ss_pred CCCEEEEEECCCCE-EEEECC
T ss_conf 56711899858997-999528
No 6
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=375.83 Aligned_cols=520 Identities=14% Similarity=0.181 Sum_probs=364.8
Q ss_pred ECCCCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCC
Q ss_conf 01267988399999489998999996992999938982599836999895999996499899999789939999889993
Q 001621 30 VHYGIPATASILAFDHIQRLLAIATLDGRIKVIGGDGIEGLLISPSQLPYKNLEFLQNQGFLISITNDNEIQVWSLESRS 109 (1043)
Q Consensus 30 ~~~G~~~~v~~lafsp~~~lLAvgt~DG~I~v~~~~~~~~~~~~~~~~~V~~l~F~~d~~~Lis~s~d~~I~vWdl~t~~ 109 (1043)
...||.+.|++++|+|++++||+|+.||.|+||+..+........+..+|.+++|+|++.+|++++.|+.+++|+.....
T Consensus 52 ~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~ 131 (577)
T 2ymu_A 52 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL 131 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCE
T ss_pred EEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCE
T ss_conf 99689899899999899999999969897999989997899997899988999998999989998079833520235520
Q ss_pred EEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 55774069978999990799999999379969999984799927630255154310001378988988969998067999
Q 001621 110 LACCLKWESNITAFSVISGSHFMYIGDENGLMSVIKYDADEGKLFQLPYNISADALSEKAGFPLLSHQPVVGVLPHPNSS 189 (1043)
Q Consensus 110 ~l~~~~~~~~Vt~i~~~p~~~~l~vG~~dG~I~vw~~d~~~~~l~~~p~~i~~~~~~~~~~~~~~~~~~V~sl~~~p~d~ 189 (1043)
..........+.++.+.|++..++.+..++.+++|..+. .... .. ..+...|.++.++|+
T Consensus 132 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~------------~~~~~~v~~~~~~~~-- 191 (577)
T 2ymu_A 132 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQ----TL------------TGHSSSVWGVAFSPD-- 191 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS--CEEE----EE------------ECCSSCEEEEEECTT--
T ss_pred EEECCCCCCCEEEEEEECCCCCCEECCCCCCEECCCCCE--EEEE----EC------------CCCCCCEEEEEECCC--
T ss_conf 011047777435554203776320025553100000000--0000----02------------687763566541699--
Q ss_pred CCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf 99799999798699998648959999277665334662369999998754576678888898499998359999899998
Q 001621 190 GNRVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDSPSEGDSTFLEGISEHQPEEKEISALCWASSSGSILAVGY 269 (1043)
Q Consensus 190 g~~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~V~sl~w~sp~g~~i~tg~ 269 (1043)
+.++++++.++.|.+||.. ++.+..+.. |...|.+++|. |++..|++++
T Consensus 192 ~~~l~~~~~d~~v~~w~~~-~~~~~~~~~-----------------------------~~~~v~~~~~s-~dg~~l~~~~ 240 (577)
T 2ymu_A 192 GQTIASASDDKTVKLWNRN-GQLLQTLTG-----------------------------HSSSVRGVAFS-PDGQTIASAS 240 (577)
T ss_dssp SSCEEEEETTSEEEEECTT-SCEEEEEEC-----------------------------CSSCEEEEEEC-TTSSCEEEEE
T ss_pred CCEEEEECCCCEEEEEECC-CCEEEEEEC-----------------------------CCCCEEEEEEC-CCCCEEEEEE
T ss_conf 7789998599989999499-968999946-----------------------------88988999997-9999999991
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECC
Q ss_conf 58919999099998546656887785200003655678626999930278878898854999628789996439999848
Q 001621 270 IDGDILLWNTSTTASTKGQQTGSRNNVVKLELSSAERRLPVIVLHWSTNKESRSNIDGRLFVYGGDEIGSEEVLTVLSLE 349 (1043)
Q Consensus 270 ~DG~I~iWd~~tg~~~~~~~~~~~~~~~~l~l~~~~~~~~i~~l~w~~~~~~~~~~~~~llv~gg~~~~~~~~ltv~~l~ 349 (1043)
.||.|++|+.. ++.... + ..+..+|..+.| .| ++..+++++.+ ..+.+|+..
T Consensus 241 ~d~~i~~w~~~-~~~~~~-------------~--~~~~~~v~~v~~-------~~-d~~~l~~~~~d----~~i~~w~~~ 292 (577)
T 2ymu_A 241 DDKTVKLWNRN-GQLLQT-------------L--TGHSSSVNGVAF-------RP-DGQTIASASDD----KTVKLWNRN 292 (577)
T ss_dssp TTSCEEEECTT-SCEEEE-------------E--CCCSSCEEEEEE-------CT-TSSEEEEEETT----SCEEEEETT
T ss_pred CCCEEEEEECC-CCEEEE-------------E--ECCCCCEEEEEE-------CC-CCCEEEEEECC----CEEEEEECC
T ss_conf 89989999599-979999-------------8--068898799999-------68-99999999599----979999489
Q ss_pred CCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 64345442021368516998420899901489888789407999838983779626430001025899999898457732
Q 001621 350 WSSGMENLRCVSRVDITLTGSFADMILLSSAGATVGNHKADLFVLTSPGQLHFYDNASLTTLLSQQEKKPSVCPVEFPGV 429 (1043)
Q Consensus 350 ~~~~~~~~~~~~~~~l~~~~~v~d~~~~p~~s~~g~~~~~~l~vl~~~G~l~~~d~~~~~~~l~~~~~~~~~~~~~~p~~ 429 (1043)
... . .....+.+.+.++.+.|... .++....+|.+.+||..... ...
T Consensus 293 ~~~-------~-~~~~~h~~~v~~~~~~~~~~--------~l~t~~~d~~i~~w~~~~~~-----------------~~~ 339 (577)
T 2ymu_A 293 GQL-------L-QTLTGHSSSVWGVAFSPDGQ--------TIASASDDKTVKLWNRNGQH-----------------LQT 339 (577)
T ss_dssp SCE-------E-EEECCCSSCEEEEEECTTSS--------EEEEEETTSCEEEEETTSCE-----------------EEE
T ss_pred CCE-------E-EEEECCCCCEEEEEECCCCC--------EEEEEECCCEEEEEECCCCE-----------------EEE
T ss_conf 958-------9-99706889769999999999--------99999699959999699972-----------------578
Q ss_pred CCCCCCCCEEEEEEECCC------CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 577899633999996268------98744457689871134799876676544334898987776556888819999958
Q 001621 430 IPISDPIMTVAEFMLLPF------GGHSSKGLSEIATFTKLHSSHTQAGHIKWPLSGGVPSPVPITKCHSVDRVYLAGYH 503 (1043)
Q Consensus 430 l~~~~~~it~~~~~~~~~------~~~~~~~w~~~~~~~~~~~~~~~~~~~~~pl~Gg~~~~~~~~~~s~~~~~l~Tg~~ 503 (1043)
+..|...++++++.++++ .++.+.+|+. . ... ...+.++...+..+ +++|+++++++++.
T Consensus 340 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~---~----~~~------~~~~~~~~~~v~~~-~~s~dg~~l~~~~~ 405 (577)
T 2ymu_A 340 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR---N----GQL------LQTLTGHSSSVRGV-AFSPDGQTIASASD 405 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET---T----CCE------EEEEECCSSCEEEE-EECTTSSCEEEEET
T ss_pred EECCCCCEEEEEECCCCCEEEEEECCCEEEEECC---C----CCE------EEEECCCCCCEEEE-EECCCCCEEEEEEC
T ss_conf 7478897799999899999999969998999908---9----978------99852788974899-99899999999949
Q ss_pred CCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCC
Q ss_conf 98499972899972344432051335775299988479999159991999940751999996378765310121058771
Q 001621 504 DGSVRIWDATYPVFKLICALDAEVQGIEVAGSRAPVSTLSFCFINSSLAVGNEFGLVYIYNLNGSLDAKNFLFVLETKSE 583 (1043)
Q Consensus 504 DgtVriWD~~~~~l~~~~~l~~~~~~i~~~~~~~~V~~l~fspd~~~La~g~~dG~V~i~~~~~~~~~~~~~f~~~~~~~ 583 (1043)
|++|++||..... +. .+.+|..+|++++|+|++.+|++++.||.|++|+....
T Consensus 406 d~~v~~~~~~~~~---~~---------~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~--------------- 458 (577)
T 2ymu_A 406 DKTVKLWNRNGQL---LQ---------TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ--------------- 458 (577)
T ss_dssp TSEEEEECTTCCE---EE---------EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC---------------
T ss_pred CCEEEEEECCCCE---EE---------EECCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCC---------------
T ss_conf 9989999699978---98---------96288997579999899999999939998999979998---------------
Q ss_pred EEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCC
Q ss_conf 33323798511568721799888999985999599999489809999758754999950689999883999998312776
Q 001621 584 VHALPEGKISLCRAVFSLVNSPVRALQFTSSGAKLAVGFECGRVAVLDMNLLSVLFFTDDISGSSSPIISMTWTEFKNTH 663 (1043)
Q Consensus 584 ~~~~~~~~~~~~~~~l~~h~~~Vtala~sp~g~~lA~Gs~dG~V~iwD~~~~~~i~~~~~~~~~~~~V~sl~fs~~~~~~ 663 (1043)
....+..|..+|++++|+|+|++||+|+.|++|++||.. ++++.... ++..+|++++|++++
T Consensus 459 -----------~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~~~~---~h~~~v~~l~~s~dg--- 520 (577)
T 2ymu_A 459 -----------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLT---GHSSSVRGVAFSPDG--- 520 (577)
T ss_dssp -----------EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEEEEE---CCSSCEEEEEECTTS---
T ss_pred -----------EEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEECCC-CCEEEEEE---CCCCCEEEEEECCCC---
T ss_conf -----------899972789977899996999999999198979999399-97899986---799998999991899---
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCEE
Q ss_conf 55689999889888898742999961682199990899972424777868773148899824078886076458986202
Q 001621 664 SLAKNPNHSEREVPVNPAEEVIIVLFKDAKISIVGGSSENMISSSPWHLKKKVIAISMEVIDSVRLYSRKSVIQGNNKTV 743 (1043)
Q Consensus 664 ~~~~~p~~~~~~~~~~~~~~~l~~gt~dg~i~v~d~~~g~~i~~~~~~~~~~~~a~~~~i~~~irl~~~~~~~~g~~k~~ 743 (1043)
.+|++++.|+.|++||. +|+.+... .|
T Consensus 521 -------------------~~l~s~~~dg~v~lwd~-~~~~~~~~----------------------------~~----- 547 (577)
T 2ymu_A 521 -------------------QTIASASDDKTVKLWNR-NGQLLQTL----------------------------TG----- 547 (577)
T ss_dssp -------------------SCEEEEETTSEEEEECT-TSCEEEEE----------------------------EC-----
T ss_pred -------------------CEEEEEECCCEEEEEEC-CCCEEEEE----------------------------CC-----
T ss_conf -------------------99999989699999969-99789897----------------------------18-----
Q ss_pred EECCCCCCCEEEEEEEECCEEEEEEEEEEECCEEEEE
Q ss_conf 1005687611499453065037999997508099981
Q 001621 744 QKVKHKNRCCWASTIEKDEKVCGLLLLFQTGAVQIRS 780 (1043)
Q Consensus 744 ~k~~~~~~c~~~~~~~~~~~g~~Lv~~~~dG~i~i~s 780 (1043)
+... +.-+.+++++..|++++.||.|++|+
T Consensus 548 ----h~~~---v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 548 ----HSSS---VWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ----CSSC---EEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ----CCCC---EEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf ----8888---78999968999999990899999969
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=373.29 Aligned_cols=538 Identities=11% Similarity=0.099 Sum_probs=352.3
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCC--EEEE-ECCCCCCEEEEEEECCCCEEEEEECCC----CEEEE
Q ss_conf 1267988399999489998999996992999938982--5998-369998959999964998999997899----39999
Q 001621 31 HYGIPATASILAFDHIQRLLAIATLDGRIKVIGGDGI--EGLL-ISPSQLPYKNLEFLQNQGFLISITNDN----EIQVW 103 (1043)
Q Consensus 31 ~~G~~~~v~~lafsp~~~lLAvgt~DG~I~v~~~~~~--~~~~-~~~~~~~V~~l~F~~d~~~Lis~s~d~----~I~vW 103 (1043)
..||...|++++|+|++++||+|+.||.|+||+.... .... ...+..+|.+++|+|++.+|++++.++ .|.+|
T Consensus 55 ~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~w 134 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLF 134 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEET
T ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE
T ss_conf 65899865999999999689999489978994898984156676225578448999899999799998997736699996
Q ss_pred ECCCCCEEEEEECC-CCEEEEEEECCCC-EEEEEECCCCEEEEEEECCCCEEEEECEEECCCCCCCCCCCCCCCCCCEEE
Q ss_conf 88999355774069-9789999907999-999993799699999847999276302551543100013789889889699
Q 001621 104 SLESRSLACCLKWE-SNITAFSVISGSH-FMYIGDENGLMSVIKYDADEGKLFQLPYNISADALSEKAGFPLLSHQPVVG 181 (1043)
Q Consensus 104 dl~t~~~l~~~~~~-~~Vt~i~~~p~~~-~l~vG~~dG~I~vw~~d~~~~~l~~~p~~i~~~~~~~~~~~~~~~~~~V~s 181 (1043)
| +++.+.++..| ..|++++|+|++. .+++|+.|++|++|+... .++. ..+ .+|...|.+
T Consensus 135 d--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~--~~~~---~~l------------~~H~~~V~~ 195 (611)
T 1nr0_A 135 D--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP--FKFK---STF------------GEHTKFVHS 195 (611)
T ss_dssp T--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT--BEEE---EEE------------CCCSSCEEE
T ss_pred E--CCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCC--CEEE---EEE------------CCCCCCEEE
T ss_conf 3--89976325478898369998899982999992898099997999--7576---652------------002571699
Q ss_pred EEECCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
Q ss_conf 98067999997999997986999986489599992776653346623699999987545766788888984999983599
Q 001621 182 VLPHPNSSGNRVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDSPSEGDSTFLEGISEHQPEEKEISALCWASSS 261 (1043)
Q Consensus 182 l~~~p~d~g~~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~V~sl~w~sp~ 261 (1043)
++|+|+ ++++++++.|+.|++||+.+++.+..+.... + ....|...|.+++|+ |+
T Consensus 196 v~fspd--g~~las~s~D~~i~lwd~~~g~~~~~~~~~~--~--------------------~~~~h~~~V~~v~~s-pd 250 (611)
T 1nr0_A 196 VRYNPD--GSLFASTGGDGTIVLYNGVDGTKTGVFEDDS--L--------------------KNVAHSGSVFGLTWS-PD 250 (611)
T ss_dssp EEECTT--SSEEEEEETTSCEEEEETTTCCEEEECBCTT--S--------------------SSCSSSSCEEEEEEC-TT
T ss_pred EEECCC--CCEEEEEECCCCEEEEECCCCCEEEEECCCC--C--------------------CCCCCCCCEEEEEEC-CC
T ss_conf 999799--9989999899919998899982866513664--3--------------------235667878999997-99
Q ss_pred CCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 99899998589199990999985466568877852000036556786269999302788788988549996287899964
Q 001621 262 GSILAVGYIDGDILLWNTSTTASTKGQQTGSRNNVVKLELSSAERRLPVIVLHWSTNKESRSNIDGRLFVYGGDEIGSEE 341 (1043)
Q Consensus 262 g~~i~tg~~DG~I~iWd~~tg~~~~~~~~~~~~~~~~l~l~~~~~~~~i~~l~w~~~~~~~~~~~~~llv~gg~~~~~~~ 341 (1043)
|.+|++++.|++|++||+.+++...... .. .........+.|. +..+++++.+ .
T Consensus 251 g~~l~s~s~D~~v~lWd~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~----------~~~l~s~s~d----~ 304 (611)
T 1nr0_A 251 GTKIASASADKTIKIWNVATLKVEKTIP-----------VG-TRIEDQQLGIIWT----------KQALVSISAN----G 304 (611)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEE-----------CC-SSGGGCEEEEEEC----------SSCEEEEETT----C
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEC-----------CC-CCCCCEEEEEEEC----------CCEEEEEECC----C
T ss_conf 9999999089809999688870134404-----------78-8766406899973----------8879999589----9
Q ss_pred EEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCEEECCCCCCCCCC
Q ss_conf 39999848643454420213685169984208999014898887894079998389837796264300010258999998
Q 001621 342 VLTVLSLEWSSGMENLRCVSRVDITLTGSFADMILLSSAGATVGNHKADLFVLTSPGQLHFYDNASLTTLLSQQEKKPSV 421 (1043)
Q Consensus 342 ~ltv~~l~~~~~~~~~~~~~~~~l~~~~~v~d~~~~p~~s~~g~~~~~~l~vl~~~G~l~~~d~~~~~~~l~~~~~~~~~ 421 (1043)
.+.+|+..... +. .....+...+.++.+.|... .++....+|.+.+||........
T Consensus 305 ~i~~~~~~~~~------~~-~~~~gh~~~v~~l~~spdg~--------~l~s~s~D~~v~~Wd~~~~~~~~--------- 360 (611)
T 1nr0_A 305 FINFVNPELGS------ID-QVRYGHNKAITALSSSADGK--------TLFSADAEGHINSWDISTGISNR--------- 360 (611)
T ss_dssp CEEEEETTTTE------EE-EEECCCSSCEEEEEECTTSS--------EEEEEETTSCEEEEETTTCCEEE---------
T ss_pred CEEEEECCCCC------CC-EEECCCCCCEEEEEEECCCC--------EEEEEECCCCEEEEECCCCCEEE---------
T ss_conf 68999688997------44-69837888889999918999--------89999589849999788792563---------
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCC-----CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98457732577899633999996268-----9874445768987113479987667654433489898777655688881
Q 001621 422 CPVEFPGVIPISDPIMTVAEFMLLPF-----GGHSSKGLSEIATFTKLHSSHTQAGHIKWPLSGGVPSPVPITKCHSVDR 496 (1043)
Q Consensus 422 ~~~~~p~~l~~~~~~it~~~~~~~~~-----~~~~~~~w~~~~~~~~~~~~~~~~~~~~~pl~Gg~~~~~~~~~~s~~~~ 496 (1043)
.+ ...|...++++.+.+... .+..+++|+.. ...... .......+.+.. ..+ .+++++.
T Consensus 361 ---~~---~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~----~~~~~~--~~~~~~~~~~~~---~~~-~~s~dg~ 424 (611)
T 1nr0_A 361 ---VF---PDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAG----GSGVDS--SKAVANKLSSQP---LGL-AVSADGD 424 (611)
T ss_dssp ---CS---SCSCSSCEEEEEECTTSCEEEEETTTEEEEECSS----SSSSCT--TSCCEEECSSCE---EEE-EECTTSS
T ss_pred ---EC---CCCCCCEEEEEEECCCCCEEEEECCCCEEEEECC----CCCCCC--CCEEEEECCCCC---CEE-EEECCCC
T ss_conf ---21---6677650789998789969999848966895468----854356--521200148997---079-9807996
Q ss_pred EEEEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEE
Q ss_conf 99999589849997289997234443205133577529998847999915999199994075199999637876531012
Q 001621 497 VYLAGYHDGSVRIWDATYPVFKLICALDAEVQGIEVAGSRAPVSTLSFCFINSSLAVGNEFGLVYIYNLNGSLDAKNFLF 576 (1043)
Q Consensus 497 ~l~Tg~~DgtVriWD~~~~~l~~~~~l~~~~~~i~~~~~~~~V~~l~fspd~~~La~g~~dG~V~i~~~~~~~~~~~~~f 576 (1043)
.++++. ++.|++|+. +.+ ..+ .|...+.+++|+||+.+||+|+.||+|++|++.....
T Consensus 425 ~~~~~~-~~~v~~~~~--~~~---~~~----------~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~------ 482 (611)
T 1nr0_A 425 IAVAAC-YKHIAIYSH--GKL---TEV----------PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV------ 482 (611)
T ss_dssp CEEEEE-SSEEEEEET--TEE---EEE----------ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE------
T ss_pred EEEEEE-CCEEEEEEC--CCE---EEE----------ECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCE------
T ss_conf 999996-763999848--943---464----------0688954999928998999968997399999459922------
Q ss_pred ECCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC-CEEEEEEECCCCCCCCEEEEE
Q ss_conf 1058771333237985115687217998889999859995999994898099997587-549999506899998839999
Q 001621 577 VLETKSEVHALPEGKISLCRAVFSLVNSPVRALQFTSSGAKLAVGFECGRVAVLDMNL-LSVLFFTDDISGSSSPIISMT 655 (1043)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~Vtala~sp~g~~lA~Gs~dG~V~iwD~~~-~~~i~~~~~~~~~~~~V~sl~ 655 (1043)
..... ..|...|++++|||+|++||+|+.|++|++||+.+ ..++.. .....|..+|.+++
T Consensus 483 -----------------~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~-~~~~~H~~~V~~v~ 543 (611)
T 1nr0_A 483 -----------------SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT-NSWTFHTAKVACVS 543 (611)
T ss_dssp -----------------EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC-CCCCCCSSCEEEEE
T ss_pred -----------------EEEEC-CCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEE-EEEEECCCCEEEEE
T ss_conf -----------------24101-577886079999899998999948998999885778722321-02640466425899
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCE-E-ECCCCCCCCCCEEEEEEEECCEEEEEEC
Q ss_conf 9831277655689999889888898742999961682199990899972-4-2477786877314889982407888607
Q 001621 656 WTEFKNTHSLAKNPNHSEREVPVNPAEEVIIVLFKDAKISIVGGSSENM-I-SSSPWHLKKKVIAISMEVIDSVRLYSRK 733 (1043)
Q Consensus 656 fs~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~gt~dg~i~v~d~~~g~~-i-~~~~~~~~~~~~a~~~~i~~~irl~~~~ 733 (1043)
|+++ +.+|++++.|+.|++||..++.. + ...
T Consensus 544 fspd----------------------g~~lasgs~D~~v~lW~~~~~~~~~~~~~------------------------- 576 (611)
T 1nr0_A 544 WSPD----------------------NVRLATGSLDNSVIVWNMNKPSDHPIIIK------------------------- 576 (611)
T ss_dssp ECTT----------------------SSEEEEEETTSCEEEEETTCTTSCCEEET-------------------------
T ss_pred ECCC----------------------CCEEEEEECCCCEEEEECCCCCCCCCHHH-------------------------
T ss_conf 8998----------------------99799997997299997887555632644-------------------------
Q ss_pred CCCCCCCCEEEECCCCCC-CEEEEEEEECCEEEEEEEEEEECCEEEEECC
Q ss_conf 645898620210056876-1149945306503799999750809998189
Q 001621 734 SVIQGNNKTVQKVKHKNR-CCWASTIEKDEKVCGLLLLFQTGAVQIRSLP 782 (1043)
Q Consensus 734 ~~~~g~~k~~~k~~~~~~-c~~~~~~~~~~~g~~Lv~~~~dG~i~i~slp 782 (1043)
.| + ...+..+.+++++. |++++.||.|++|++|
T Consensus 577 ---~~------------h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 577 ---GA------------HAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp ---TS------------STTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred ---CC------------CCCCCEEEEEECCCCE-EEEECCCCCEEEEECC
T ss_conf ---46------------7656711899858997-9995288778998444
No 8
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=339.07 Aligned_cols=544 Identities=13% Similarity=0.087 Sum_probs=323.9
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCC----EEEEE-CCCCCC-EEEEEEEC--CCCEEEEEECCCCEEEE
Q ss_conf 267988399999489998999996992999938982----59983-699989-59999964--99899999789939999
Q 001621 32 YGIPATASILAFDHIQRLLAIATLDGRIKVIGGDGI----EGLLI-SPSQLP-YKNLEFLQ--NQGFLISITNDNEIQVW 103 (1043)
Q Consensus 32 ~G~~~~v~~lafsp~~~lLAvgt~DG~I~v~~~~~~----~~~~~-~~~~~~-V~~l~F~~--d~~~Lis~s~d~~I~vW 103 (1043)
.++.+.|++++|+|++++||+++ ++.|++|+.... +.... ..+... |.+++|+| ++.+|++++.|+.|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEC-CCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCEEEEE
T ss_conf 77658536899889999799935-98499997778877651431880578844999997967899889996489879997
Q ss_pred ECCCC--------CEEEEEEC-CCCEEEEEEECCCCEEEEEECC----CCEEEEEEECCCCEEEEECEEECCCCCCCCCC
Q ss_conf 88999--------35577406-9978999990799999999379----96999998479992763025515431000137
Q 001621 104 SLESR--------SLACCLKW-ESNITAFSVISGSHFMYIGDEN----GLMSVIKYDADEGKLFQLPYNISADALSEKAG 170 (1043)
Q Consensus 104 dl~t~--------~~l~~~~~-~~~Vt~i~~~p~~~~l~vG~~d----G~I~vw~~d~~~~~l~~~p~~i~~~~~~~~~~ 170 (1043)
|+.++ +.+..+.. ...|++++|+|++++++++..+ +.|.+|+ .. ... ..+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~--~~~---~~~---------- 156 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SG--NSL---GEV---------- 156 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TC--CEE---EEC----------
T ss_pred ECCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEE--CC--CCC---EEE----------
T ss_conf 6888765544554200011125663799999079998999316877755799997--89--810---313----------
Q ss_pred CCCCCCCCEEEEEECCCCCCC-EEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 898898896999806799999-7999997986999986489599992776653346623699999987545766788888
Q 001621 171 FPLLSHQPVVGVLPHPNSSGN-RVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDSPSEGDSTFLEGISEHQPEE 249 (1043)
Q Consensus 171 ~~~~~~~~V~sl~~~p~d~g~-~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (1043)
..|...|.++.|+|+ +. ++++++.++.|.+||+.+.+.+..+.. |.
T Consensus 157 --~~~~~~v~~~~~~~~--~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-----------------------------~~ 203 (615)
T 1pgu_A 157 --SGHSQRINACHLKQS--RPMRSMTVGDDGSVVFYQGPPFKFSASDRT-----------------------------HH 203 (615)
T ss_dssp --CSCSSCEEEEEECSS--SSCEEEEEETTTEEEEEETTTBEEEEEECS-----------------------------SS
T ss_pred --ECCCCCEEEEEECCC--CCCEEEEEECCCCEEEEECCCCCEEEEECC-----------------------------CC
T ss_conf --067743889998878--996899995799599996999610132025-----------------------------67
Q ss_pred C---CEEEEEEECCC-CCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 9---84999983599-9989999858919999099998546656887785200003655678626999930278878898
Q 001621 250 K---EISALCWASSS-GSILAVGYIDGDILLWNTSTTASTKGQQTGSRNNVVKLELSSAERRLPVIVLHWSTNKESRSNI 325 (1043)
Q Consensus 250 ~---~V~sl~w~sp~-g~~i~tg~~DG~I~iWd~~tg~~~~~~~~~~~~~~~~l~l~~~~~~~~i~~l~w~~~~~~~~~~ 325 (1043)
. .|++++|+ |+ +.++++++.||.|++||+.+++...... . ....+..+|..+.|+
T Consensus 204 ~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----------~-~~~~~~~~v~~~~~~--------- 262 (615)
T 1pgu_A 204 KQGSFVRDVEFS-PDSGEFVITVGSDRKISCFDGKSGEFLKYIE----------D-DQEPVQGGIFALSWL--------- 262 (615)
T ss_dssp CTTCCEEEEEEC-STTCCEEEEEETTCCEEEEETTTCCEEEECC----------B-TTBCCCSCEEEEEES---------
T ss_pred CCCCEEEEEEEC-CCCCCEEEEEECCCEEEEEECCCCCEEEEEC----------C-CCCCCCCCEEEEEEC---------
T ss_conf 777428999978-9778889998689808999899997858952----------5-444567755899981---------
Q ss_pred CCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECC---CCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEE
Q ss_conf 854999628789996439999848643454420213685169---98420899901489888789407999838983779
Q 001621 326 DGRLFVYGGDEIGSEEVLTVLSLEWSSGMENLRCVSRVDITL---TGSFADMILLSSAGATVGNHKADLFVLTSPGQLHF 402 (1043)
Q Consensus 326 ~~~llv~gg~~~~~~~~ltv~~l~~~~~~~~~~~~~~~~l~~---~~~v~d~~~~p~~s~~g~~~~~~l~vl~~~G~l~~ 402 (1043)
++.++++++.+ ..+.+|++.... +...+..+. ...+..+.. +.. ..+++...+|.+.+
T Consensus 263 ~~~~l~~~~~d----~~i~~wd~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~--------~~l~~~~~~g~i~~ 323 (615)
T 1pgu_A 263 DSQKFATVGAD----ATIRVWDVTTSK------CVQKWTLDKQQLGNQQVGVVA-TGN--------GRIISLSLDGTLNF 323 (615)
T ss_dssp SSSEEEEEETT----SEEEEEETTTTE------EEEEEECCTTCGGGCEEEEEE-EET--------TEEEEEETTSCEEE
T ss_pred CCCEEEEECCC----CCEEEEECCCCC------EEEEECCCCCCCCCCEEEEEE-CCC--------CEEEEEECCCCEEE
T ss_conf 89979998489----948999788892------787884787754571469991-899--------76999978997899
Q ss_pred EECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE--EECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 6264300010258999998984577325778996339999--96268987444576898711347998766765443348
Q 001621 403 YDNASLTTLLSQQEKKPSVCPVEFPGVIPISDPIMTVAEF--MLLPFGGHSSKGLSEIATFTKLHSSHTQAGHIKWPLSG 480 (1043)
Q Consensus 403 ~d~~~~~~~l~~~~~~~~~~~~~~p~~l~~~~~~it~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~pl~G 480 (1043)
||....... ..+..|...++++.+ ...+..++.+.+|+.. .+ . .+
T Consensus 324 ~d~~~~~~~----------------~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~---------~~-------~-~~ 370 (615)
T 1pgu_A 324 YELGHDEVL----------------KTISGHNKGITALTVNPLISGSYDGRIMEWSSS---------SM-------H-QD 370 (615)
T ss_dssp EETTEEEEE----------------EEECCCSSCEEEEETTTTEEEETTSCEEETTTT---------EE-------E-CC
T ss_pred EECCCCCEE----------------EEEECCCCCEEEEEECCCEEECCCCEEEEEECH---------HH-------C-CC
T ss_conf 988899288----------------999477787899995674898799959998752---------41-------5-75
Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCE
Q ss_conf 98987776556888819999958984999728999723444320513357752999884799991599919999407519
Q 001621 481 GVPSPVPITKCHSVDRVYLAGYHDGSVRIWDATYPVFKLICALDAEVQGIEVAGSRAPVSTLSFCFINSSLAVGNEFGLV 560 (1043)
Q Consensus 481 g~~~~~~~~~~s~~~~~l~Tg~~DgtVriWD~~~~~l~~~~~l~~~~~~i~~~~~~~~V~~l~fspd~~~La~g~~dG~V 560 (1043)
+...+..+ .+ +.++.+++++.||.|++||+..+... ..+.+++|+|++..++++ .++.+
T Consensus 371 ~~~~v~~~-~~-~~~~~l~~~~~d~~i~~~~~~~~~~~------------------~~~~~~~~s~~~~~~~~~-~~~~~ 429 (615)
T 1pgu_A 371 HSNLIVSL-DN-SKAQEYSSISWDDTLKVNGITKHEFG------------------SQPKVASANNDGFTAVLT-NDDDL 429 (615)
T ss_dssp CCSCEEEE-EC-CSTTCCEEEETTTEEEETTEEEEECS------------------SCEEEEEECSSSEEEEEE-TTSEE
T ss_pred CCCCEEEE-EE-CCCCEEEEEECCCCEEEEECCCCCCC------------------CCCEEEEECCCCCEEEEE-CCCCE
T ss_conf 56851799-97-89867999958997999886667636------------------784699982898789996-79826
Q ss_pred EEEEECCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEC-CCEEEEEECCCCEEEE
Q ss_conf 999963787653101210587713332379851156872179988899998599959999948-9809999758754999
Q 001621 561 YIYNLNGSLDAKNFLFVLETKSEVHALPEGKISLCRAVFSLVNSPVRALQFTSSGAKLAVGFE-CGRVAVLDMNLLSVLF 639 (1043)
Q Consensus 561 ~i~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~h~~~Vtala~sp~g~~lA~Gs~-dG~V~iwD~~~~~~i~ 639 (1043)
++|+..... ....+ .+..++++++|+ +.+|++|+. ||.|++||+.+.....
T Consensus 430 ~~~~~~~~~-------------------------~~~~~-~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~ 481 (615)
T 1pgu_A 430 LILQSFTGD-------------------------IIKSV-RLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSF 481 (615)
T ss_dssp EEEETTTCC-------------------------EEEEE-ECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEE
T ss_pred EEEECCCCC-------------------------EEEEC-CCCCCCEEEEEC--CCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 999446786-------------------------65551-567872077883--88899965689869999888854353
Q ss_pred EEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCEEE
Q ss_conf 95068999988399999831277655689999889888898742999961682199990899972424777868773148
Q 001621 640 FTDDISGSSSPIISMTWTEFKNTHSLAKNPNHSEREVPVNPAEEVIIVLFKDAKISIVGGSSENMISSSPWHLKKKVIAI 719 (1043)
Q Consensus 640 ~~~~~~~~~~~V~sl~fs~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~gt~dg~i~v~d~~~g~~i~~~~~~~~~~~~a~ 719 (1043)
..+ ..+..+|++++|++. +.+|++++.|+.|.+||..+++.+....
T Consensus 482 -~~~-~~~~~~v~~~~~s~~----------------------g~~l~~~~~dg~i~iw~~~~~~~~~~~~---------- 527 (615)
T 1pgu_A 482 -DLK-TPLRAKPSYISISPS----------------------ETYIAAGDVMGKILLYDLQSREVKTSRW---------- 527 (615)
T ss_dssp -ECS-SCCSSCEEEEEECTT----------------------SSEEEEEETTSCEEEEETTTTEEEECCS----------
T ss_pred -CCC-CCCCCCEEEEEECCC----------------------CCEEEECCCCCEEEEEECCCCCCEEEEE----------
T ss_conf -336-776575079999899----------------------9989981799859986577776246760----------
Q ss_pred EEEEECCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEEECC----------EEEEEEEEEEECCEEEEECCCH-HHHH
Q ss_conf 8998240788860764589862021005687611499453065----------0379999975080999818981-2444
Q 001621 720 SMEVIDSVRLYSRKSVIQGNNKTVQKVKHKNRCCWASTIEKDE----------KVCGLLLLFQTGAVQIRSLPDL-ELVM 788 (1043)
Q Consensus 720 ~~~i~~~irl~~~~~~~~g~~k~~~k~~~~~~c~~~~~~~~~~----------~g~~Lv~~~~dG~i~i~slp~l-~~~~ 788 (1043)
+.+ ... +..+.+++ ++..|+++..||.|++|++.+. +.+.
T Consensus 528 ------------------~~h--------~~~---v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 578 (615)
T 1pgu_A 528 ------------------AFR--------TSK---INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK 578 (615)
T ss_dssp ------------------CCC--------SSC---EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEE
T ss_pred ------------------CCC--------CCC---EEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECH
T ss_conf ------------------478--------871---469997683234533246888899981797199997788854031
Q ss_pred HHCCCCEEEEECCCCCCEEEEEC-CCCEEEECC
Q ss_conf 40234212210067774014724-994999915
Q 001621 789 ESSLMSILRWNFKANMDKTISAD-NGQITLANG 820 (1043)
Q Consensus 789 ~~~l~~~~~~~~~~~~~~~i~~s-dg~~~l~~g 820 (1043)
... -+...+..++++ ||+ +++.|
T Consensus 579 ~~~--------~h~~~v~~l~~s~~~~-l~s~~ 602 (615)
T 1pgu_A 579 ALN--------AHKDGVNNLLWETPST-LVSSG 602 (615)
T ss_dssp ETT--------SSTTCEEEEEEEETTE-EEEEE
T ss_pred HHH--------CCCCCEEEEEECCCCC-EEEEC
T ss_conf 133--------5943058999738997-28845
No 9
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=334.00 Aligned_cols=527 Identities=13% Similarity=0.089 Sum_probs=361.0
Q ss_pred ECCCCCCC-EEEEEECC--CCCEEEEEECCCCEEEECCCCC--------EEEEEC-CCCCCEEEEEEECCCCEEEEEECC
Q ss_conf 01267988-39999948--9998999996992999938982--------599836-999895999996499899999789
Q 001621 30 VHYGIPAT-ASILAFDH--IQRLLAIATLDGRIKVIGGDGI--------EGLLIS-PSQLPYKNLEFLQNQGFLISITND 97 (1043)
Q Consensus 30 ~~~G~~~~-v~~lafsp--~~~lLAvgt~DG~I~v~~~~~~--------~~~~~~-~~~~~V~~l~F~~d~~~Lis~s~d 97 (1043)
...||.+. |++++|+| ++++||+|+.||.|++|+.... .....+ .+..+|.+++|++++.+|++++.+
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 137 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 137 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred EEECCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCC
T ss_conf 88057884499999796789988999648987999768887655445542000111256637999990799989993168
Q ss_pred ----CCEEEEECCCCCEEEEEECC-CCEEEEEEECCCC-EEEEEECCCCEEEEEEECCCCEEEEECEEECCCCCCCCCCC
Q ss_conf ----93999988999355774069-9789999907999-99999379969999984799927630255154310001378
Q 001621 98 ----NEIQVWSLESRSLACCLKWE-SNITAFSVISGSH-FMYIGDENGLMSVIKYDADEGKLFQLPYNISADALSEKAGF 171 (1043)
Q Consensus 98 ----~~I~vWdl~t~~~l~~~~~~-~~Vt~i~~~p~~~-~l~vG~~dG~I~vw~~d~~~~~l~~~p~~i~~~~~~~~~~~ 171 (1043)
+.|.+|| +++.+..+..+ ..|+++.|+|+++ ++++++.+|.|++|+... .+.. ..+.
T Consensus 138 ~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~--~~~~---~~~~---------- 200 (615)
T 1pgu_A 138 RDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP--FKFS---ASDR---------- 200 (615)
T ss_dssp SSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT--BEEE---EEEC----------
T ss_pred CCCCCEEEEEE--CCCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCC--CCEE---EEEC----------
T ss_conf 77755799997--89810313067743889998878996899995799599996999--6101---3202----------
Q ss_pred CCCCCC---CEEEEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 988988---96999806799999799999798699998648959999277665334662369999998754576678888
Q 001621 172 PLLSHQ---PVVGVLPHPNSSGNRVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDSPSEGDSTFLEGISEHQPE 248 (1043)
Q Consensus 172 ~~~~~~---~V~sl~~~p~d~g~~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 248 (1043)
.|.. +|.++.|+|+ +++++++++.+|.|.+||+.+++.+..+.. . ...|
T Consensus 201 --~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-------~------------------~~~~ 252 (615)
T 1pgu_A 201 --THHKQGSFVRDVEFSPD-SGEFVITVGSDRKISCFDGKSGEFLKYIED-------D------------------QEPV 252 (615)
T ss_dssp --SSSCTTCCEEEEEECST-TCCEEEEEETTCCEEEEETTTCCEEEECCB-------T------------------TBCC
T ss_pred --CCCCCCCEEEEEEECCC-CCCEEEEEECCCEEEEEECCCCCEEEEECC-------C------------------CCCC
T ss_conf --56777742899997897-788899986898089998999978589525-------4------------------4456
Q ss_pred CCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCE
Q ss_conf 89849999835999989999858919999099998546656887785200003655678626999930278878898854
Q 001621 249 EKEISALCWASSSGSILAVGYIDGDILLWNTSTTASTKGQQTGSRNNVVKLELSSAERRLPVIVLHWSTNKESRSNIDGR 328 (1043)
Q Consensus 249 ~~~V~sl~w~sp~g~~i~tg~~DG~I~iWd~~tg~~~~~~~~~~~~~~~~l~l~~~~~~~~i~~l~w~~~~~~~~~~~~~ 328 (1043)
...|.+++| + ++.++++++.||.|++||+.+++..... ..........+..+.|. ++.
T Consensus 253 ~~~v~~~~~-~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~---------~~~ 310 (615)
T 1pgu_A 253 QGGIFALSW-L-DSQKFATVGADATIRVWDVTTSKCVQKW-----------TLDKQQLGNQQVGVVAT---------GNG 310 (615)
T ss_dssp CSCEEEEEE-S-SSSEEEEEETTSEEEEEETTTTEEEEEE-----------ECCTTCGGGCEEEEEEE---------ETT
T ss_pred CCCEEEEEE-C-CCCEEEEECCCCCEEEEECCCCCEEEEE-----------CCCCCCCCCCEEEEEEC---------CCC
T ss_conf 775589998-1-8997999848994899978889278788-----------47877545714699918---------997
Q ss_pred EEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCC
Q ss_conf 99962878999643999984864345442021368516998420899901489888789407999838983779626430
Q 001621 329 LFVYGGDEIGSEEVLTVLSLEWSSGMENLRCVSRVDITLTGSFADMILLSSAGATVGNHKADLFVLTSPGQLHFYDNASL 408 (1043)
Q Consensus 329 llv~gg~~~~~~~~ltv~~l~~~~~~~~~~~~~~~~l~~~~~v~d~~~~p~~s~~g~~~~~~l~vl~~~G~l~~~d~~~~ 408 (1043)
.+++++.+ ..+.+|++.... ....+ ..+.+.+.++.+ |. ++....+|.+.+|+...+
T Consensus 311 ~l~~~~~~----g~i~~~d~~~~~------~~~~~-~~~~~~v~~~~~-~~-----------l~~~~~dg~i~~w~~~~~ 367 (615)
T 1pgu_A 311 RIISLSLD----GTLNFYELGHDE------VLKTI-SGHNKGITALTV-NP-----------LISGSYDGRIMEWSSSSM 367 (615)
T ss_dssp EEEEEETT----SCEEEEETTEEE------EEEEE-CCCSSCEEEEET-TT-----------TEEEETTSCEEETTTTEE
T ss_pred EEEEEECC----CCEEEEECCCCC------EEEEE-ECCCCCEEEEEE-CC-----------CEEECCCCEEEEEECHHH
T ss_conf 69999789----978999888992------88999-477787899995-67-----------489879995999875241
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC------CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 001025899999898457732577899633999996268------98744457689871134799876676544334898
Q 001621 409 TTLLSQQEKKPSVCPVEFPGVIPISDPIMTVAEFMLLPF------GGHSSKGLSEIATFTKLHSSHTQAGHIKWPLSGGV 482 (1043)
Q Consensus 409 ~~~l~~~~~~~~~~~~~~p~~l~~~~~~it~~~~~~~~~------~~~~~~~w~~~~~~~~~~~~~~~~~~~~~pl~Gg~ 482 (1043)
. ..|...++++.+ +... .++.+.+|+.. ..+ ...
T Consensus 368 --------------------~-~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~--~~~--------------~~~-- 407 (615)
T 1pgu_A 368 --------------------H-QDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGIT--KHE--------------FGS-- 407 (615)
T ss_dssp --------------------E-CCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEE--EEE--------------CSS--
T ss_pred --------------------C-CCCCCCEEEEEE-CCCCEEEEEECCCCEEEEECC--CCC--------------CCC--
T ss_conf --------------------5-755685179997-898679999589979998866--676--------------367--
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEEC-CCCEE
Q ss_conf 98777655688881999995898499972899972344432051335775299988479999159991999940-75199
Q 001621 483 PSPVPITKCHSVDRVYLAGYHDGSVRIWDATYPVFKLICALDAEVQGIEVAGSRAPVSTLSFCFINSSLAVGNE-FGLVY 561 (1043)
Q Consensus 483 ~~~~~~~~~s~~~~~l~Tg~~DgtVriWD~~~~~l~~~~~l~~~~~~i~~~~~~~~V~~l~fspd~~~La~g~~-dG~V~ 561 (1043)
....+ .+++++.+++++ .++.+++|+...+.. +..+ .+..++++++|+ +..|++++. +|.|+
T Consensus 408 -~~~~~-~~s~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~--~~~l~~~~~~d~~i~ 470 (615)
T 1pgu_A 408 -QPKVA-SANNDGFTAVLT-NDDDLLILQSFTGDI--IKSV----------RLNSPGSAVSLS--QNYVAVGLEEGNTIQ 470 (615)
T ss_dssp -CEEEE-EECSSSEEEEEE-TTSEEEEEETTTCCE--EEEE----------ECSSCEEEEEEC--SSEEEEEETTTSCEE
T ss_pred -CCEEE-EECCCCCEEEEE-CCCCEEEEECCCCCE--EEEC----------CCCCCCEEEEEC--CCEEEEEECCCCEEE
T ss_conf -84699-982898789996-798269994467866--5551----------567872077883--888999656898699
Q ss_pred EEEECCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEE
Q ss_conf 99963787653101210587713332379851156872179988899998599959999948980999975875499995
Q 001621 562 IYNLNGSLDAKNFLFVLETKSEVHALPEGKISLCRAVFSLVNSPVRALQFTSSGAKLAVGFECGRVAVLDMNLLSVLFFT 641 (1043)
Q Consensus 562 i~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~h~~~Vtala~sp~g~~lA~Gs~dG~V~iwD~~~~~~i~~~ 641 (1043)
+|++...... . ..+..|..+|++++|+|+|++||+|+.||.|++||+.++..+...
T Consensus 471 ~~~~~~~~~~-----------------------~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~ 526 (615)
T 1pgu_A 471 VFKLSDLEVS-----------------------F-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSR 526 (615)
T ss_dssp EEETTEEEEE-----------------------E-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECC
T ss_pred EEECCCCCCC-----------------------C-CCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCCCEEEE
T ss_conf 9988885435-----------------------3-336776575079999899998998179985998657777624676
Q ss_pred ECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCC-CEEECCCCCCCCCCEEEE
Q ss_conf 0689999883999998312776556899998898888987429999616821999908999-724247778687731488
Q 001621 642 DDISGSSSPIISMTWTEFKNTHSLAKNPNHSEREVPVNPAEEVIIVLFKDAKISIVGGSSE-NMISSSPWHLKKKVIAIS 720 (1043)
Q Consensus 642 ~~~~~~~~~V~sl~fs~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~gt~dg~i~v~d~~~g-~~i~~~~~~~~~~~~a~~ 720 (1043)
...+..+|++++|++.... ....+.++.+|++++.|+.|++||..++ ..+...
T Consensus 527 --~~~h~~~v~~~~~sp~~~~------------~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~------------ 580 (615)
T 1pgu_A 527 --WAFRTSKINAISWKPAEKG------------ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL------------ 580 (615)
T ss_dssp --SCCCSSCEEEEEECCCC------------------CCSCCEEEEEETTSCEEEEESSCTTCCEEET------------
T ss_pred --ECCCCCCEEEEEECCCCCC------------CCCCCCCCCEEEEECCCCCEEEEECCCCCEECHHH------------
T ss_conf --0478871469997683234------------53324688889998179719999778885403113------------
Q ss_pred EEEECCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCEEEEEEEEEEECCEEEEECC
Q ss_conf 99824078886076458986202100568761149945306503799999750809998189
Q 001621 721 MEVIDSVRLYSRKSVIQGNNKTVQKVKHKNRCCWASTIEKDEKVCGLLLLFQTGAVQIRSLP 782 (1043)
Q Consensus 721 ~~i~~~irl~~~~~~~~g~~k~~~k~~~~~~c~~~~~~~~~~~g~~Lv~~~~dG~i~i~slp 782 (1043)
.+ +...+..+.+++++. |+++..||.|++|++.
T Consensus 581 ----------------~~------------h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 581 ----------------NA------------HKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp ----------------TS------------STTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred ----------------HC------------CCCCEEEEEECCCCC-EEEECCCCEEEEEEEE
T ss_conf ----------------35------------943058999738997-2884599639999601
No 10
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=326.29 Aligned_cols=593 Identities=12% Similarity=0.079 Sum_probs=315.6
Q ss_pred CCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCE
Q ss_conf 69998959999964998999997899399998899935577406997899999079999999937996999998479992
Q 001621 73 SPSQLPYKNLEFLQNQGFLISITNDNEIQVWSLESRSLACCLKWESNITAFSVISGSHFMYIGDENGLMSVIKYDADEGK 152 (1043)
Q Consensus 73 ~~~~~~V~~l~F~~d~~~Lis~s~d~~I~vWdl~t~~~l~~~~~~~~Vt~i~~~p~~~~l~vG~~dG~I~vw~~d~~~~~ 152 (1043)
..+...|.+++|+|++.+|++++.|+.|++||..+.+.+..+.....|++++|+| ++++++++.|++|++|++... +
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~--~ 90 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ--K 90 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC--S
T ss_pred CCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCEEEEEECC-CCEEEEEECCCEEEEEECCCC--C
T ss_conf 6889984899997999989999297989999689947999868999779999908-988999989595999989999--6
Q ss_pred EEEECEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 76302551543100013789889889699980679999979999979869999864895999927766533466236999
Q 001621 153 LFQLPYNISADALSEKAGFPLLSHQPVVGVLPHPNSSGNRVLIAYENALVILWDVSEAQIIFVGGGKDLQLKDGVVDSPS 232 (1043)
Q Consensus 153 l~~~p~~i~~~~~~~~~~~~~~~~~~V~sl~~~p~d~g~~lli~~~dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (1043)
.. ..+. +...|.++.|+|+ ++++++++.||.|++||+..++....... .... ..
T Consensus 91 ~~---~~~~-------------~~~~V~~v~~sp~--g~~l~sgs~dg~V~lwd~~~~~~~~~~i~-~~~~--~~----- 144 (902)
T 2oaj_A 91 VL---TTVF-------------VPGKITSIDTDAS--LDWMLIGLQNGSMIVYDIDRDQLSSFKLD-NLQK--SS----- 144 (902)
T ss_dssp EE---EEEE-------------CSSCEEEEECCTT--CSEEEEEETTSCEEEEETTTTEEEEEEEC-CHHH--HH-----
T ss_pred EE---EEEC-------------CCCCEEEEEECCC--CCEEEEECCCCCEEEEECCCCCCCCCEEC-CCCC--CC-----
T ss_conf 89---9974-------------8998799998799--99899994999299999999962650304-3210--00-----
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEECCC-CCEEEEEECCCCEEEECCCCCCCCCCCCCCCCC-CCEE---EECCCCCCC
Q ss_conf 99987545766788888984999983599-998999985891999909999854665688778-5200---003655678
Q 001621 233 EGDSTFLEGISEHQPEEKEISALCWASSS-GSILAVGYIDGDILLWNTSTTASTKGQQTGSRN-NVVK---LELSSAERR 307 (1043)
Q Consensus 233 ~~~~~~g~~~~~~~~~~~~V~sl~w~sp~-g~~i~tg~~DG~I~iWd~~tg~~~~~~~~~~~~-~~~~---l~l~~~~~~ 307 (1043)
.....|...|++++|+ |+ +..+++|+.||.| +||+.++........+... +... ... ...+.
T Consensus 145 ----------~~~~~h~~~V~sl~~s-p~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~h~ 211 (902)
T 2oaj_A 145 ----------FFPAARLSPIVSIQWN-PRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKT-NEKRT 211 (902)
T ss_dssp ----------TCSSSCCCCCCEEEEE-TTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCT-TSCBC
T ss_pred ----------CCCCCCCCCEEEEEEC-CCCCCEEEEEECCCCE-EEECCCCCEEEEEECCCCCCCCCCCCCCCC-CCCCC
T ss_conf ----------2544578973899976-6999989999189849-998778965799833557767776544332-34567
Q ss_pred CCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCC--CCEE---EEE------EEECCCCCEEEEEE
Q ss_conf 626999930278878898854999628789996439999848643454--4202---136------85169984208999
Q 001621 308 LPVIVLHWSTNKESRSNIDGRLFVYGGDEIGSEEVLTVLSLEWSSGME--NLRC---VSR------VDITLTGSFADMIL 376 (1043)
Q Consensus 308 ~~i~~l~w~~~~~~~~~~~~~llv~gg~~~~~~~~ltv~~l~~~~~~~--~~~~---~~~------~~l~~~~~v~d~~~ 376 (1043)
.+|..+.| +|+ +.++++|+.| ..+.+|++....... ++.. ... -.+.+.+.+..+..
T Consensus 212 ~~V~~v~f-------spd-g~~lasgs~D----g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w 279 (902)
T 2oaj_A 212 PKVIQSLY-------HPN-SLHIITIHED----NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYW 279 (902)
T ss_dssp CCEEEEEE-------CTT-SSEEEEEETT----CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEE
T ss_pred CCEEEEEE-------CCC-CCEEEEEECC----CEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 77689998-------599-9999999899----93999987899688888501234578777678888555677457999
Q ss_pred EECCCCCCCCCCCEEEEEC-CC-----CEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf 0148988878940799983-89-----83779626430001025899999898457732577899633999996268987
Q 001621 377 LSSAGATVGNHKADLFVLT-SP-----GQLHFYDNASLTTLLSQQEKKPSVCPVEFPGVIPISDPIMTVAEFMLLPFGGH 450 (1043)
Q Consensus 377 ~p~~s~~g~~~~~~l~vl~-~~-----G~l~~~d~~~~~~~l~~~~~~~~~~~~~~p~~l~~~~~~it~~~~~~~~~~~~ 450 (1043)
.+..+|.+ + .+++.. .+ ..+..|+.+.. +. .
T Consensus 280 ~~~~~pd~---~-~ll~sg~~~~~~~~~~v~~~~~~~~------------------~~--------~------------- 316 (902)
T 2oaj_A 280 MCENNPEY---T-SLLISHKSISRGDNQSLTMIDLGYT------------------PR--------Y------------- 316 (902)
T ss_dssp EECSSTTE---E-EEEEEEECSTTSSCCCEEEEEEEEC------------------CC--------G-------------
T ss_pred EECCCCCC---C-EEEEECCCCCCCCCCEEEEEECCCC------------------CC--------C-------------
T ss_conf 73499988---7-8999688777788852899954789------------------87--------5-------------
Q ss_pred CHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCCCCCC---------CCCCCCCEEEEEECCCCEEEEECCCCCCEEE
Q ss_conf 444576898711-347998766765443348989877765---------5688881999995898499972899972344
Q 001621 451 SSKGLSEIATFT-KLHSSHTQAGHIKWPLSGGVPSPVPIT---------KCHSVDRVYLAGYHDGSVRIWDATYPVFKLI 520 (1043)
Q Consensus 451 ~~~~w~~~~~~~-~~~~~~~~~~~~~~pl~Gg~~~~~~~~---------~~s~~~~~l~Tg~~DgtVriWD~~~~~l~~~ 520 (1043)
....|+.+.... ..+. ...+++..+. .+..+. .-..+...+++++.||.|++||+..+.....
T Consensus 317 ~~~s~~~~~~~~~~~~~------~~~~~~~~~~-~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~ 389 (902)
T 2oaj_A 317 SITSYEGMKNYYANPKQ------MKIFPLPTNV-PIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDK 389 (902)
T ss_dssp GGCCHHHHHHHHHSCSE------EEEECCSSSS-CEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECC
T ss_pred CCCCHHHHHHHHCCCCC------EEEEECCCCC-CEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCC
T ss_conf 55425565466417452------2787418999-5479999778898867787850699991798489997899985565
Q ss_pred -----EEEC---CCEEE----------------------EEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCC
Q ss_conf -----4320---51335----------------------77529998847999915999199994075199999637876
Q 001621 521 -----CALD---AEVQG----------------------IEVAGSRAPVSTLSFCFINSSLAVGNEFGLVYIYNLNGSLD 570 (1043)
Q Consensus 521 -----~~l~---~~~~~----------------------i~~~~~~~~V~~l~fspd~~~La~g~~dG~V~i~~~~~~~~ 570 (1043)
..+. ..+.. ..+.+|...+.+++|+|++..|++|+.||+|++||+.....
T Consensus 390 ~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~ 469 (902)
T 2oaj_A 390 ASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDI 469 (902)
T ss_dssp GGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTT
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCC
T ss_conf 55689852235897248999974999998888604699975457857787533366675899965898389997877645
Q ss_pred CCCEEEECCCCCCEEEECCCCCCEEEEEE-----CCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCE---------
Q ss_conf 53101210587713332379851156872-----1799888999985999599999489809999758754---------
Q 001621 571 AKNFLFVLETKSEVHALPEGKISLCRAVF-----SLVNSPVRALQFTSSGAKLAVGFECGRVAVLDMNLLS--------- 636 (1043)
Q Consensus 571 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~l-----~~h~~~Vtala~sp~g~~lA~Gs~dG~V~iwD~~~~~--------- 636 (1043)
..... +. ..+ .+|...|++++|||+|++||+|+.||+|++||+.++.
T Consensus 470 ~~~~~-----------------~~--~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~ 530 (902)
T 2oaj_A 470 QDNAS-----------------FE--VNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPE 530 (902)
T ss_dssp TTTBC-----------------EE--EEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--------
T ss_pred CCCCE-----------------EE--EECHHHCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCC
T ss_conf 67736-----------------77--501541377888764699963899969999458579999924865557545577
Q ss_pred ------------------------------------EEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf ------------------------------------99995068999988399999831277655689999889888898
Q 001621 637 ------------------------------------VLFFTDDISGSSSPIISMTWTEFKNTHSLAKNPNHSEREVPVNP 680 (1043)
Q Consensus 637 ------------------------------------~i~~~~~~~~~~~~V~sl~fs~~~~~~~~~~~p~~~~~~~~~~~ 680 (1043)
++... ..+..+|++++|+++
T Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l---~~h~~~V~svafSpd--------------------- 586 (902)
T 2oaj_A 531 SGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAV---HANKGKTSAINNSNI--------------------- 586 (902)
T ss_dssp -------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEE---CCCSCSEEEEEECBT---------------------
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE---ECCCCCEEEEEECCC---------------------
T ss_conf 86651134551346796543224236898877760146999---868886779996487---------------------
Q ss_pred CCEEEEEECCCCEEEEECCCCCCEEECCC-------CCCCCCCEEEE----------------EEEECCEEEEEE---CC
Q ss_conf 74299996168219999089997242477-------78687731488----------------998240788860---76
Q 001621 681 AEEVIIVLFKDAKISIVGGSSENMISSSP-------WHLKKKVIAIS----------------MEVIDSVRLYSR---KS 734 (1043)
Q Consensus 681 ~~~~l~~gt~dg~i~v~d~~~g~~i~~~~-------~~~~~~~~a~~----------------~~i~~~irl~~~---~~ 734 (1043)
+ +|++|+.|+.|.+||..++.++.... ......+++.+ +.....+++|++ .+
T Consensus 587 -G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~ 664 (902)
T 2oaj_A 587 -G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASG 664 (902)
T ss_dssp -S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGG
T ss_pred -C-EEEEEECCCCEEEEECCCCEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCC
T ss_conf -6-89999589769999888983999702467264666613999999984178987633899995687399999955899
Q ss_pred CCCCCCCEEEE--C--CCCCCCEEEEEEEE--------------------CCEEEEEEEEEEECCEEEEECCCHHHHHHH
Q ss_conf 45898620210--0--56876114994530--------------------650379999975080999818981244440
Q 001621 735 VIQGNNKTVQK--V--KHKNRCCWASTIEK--------------------DEKVCGLLLLFQTGAVQIRSLPDLELVMES 790 (1043)
Q Consensus 735 ~~~g~~k~~~k--~--~~~~~c~~~~~~~~--------------------~~~g~~Lv~~~~dG~i~i~slp~l~~~~~~ 790 (1043)
|.....-. . +...+...+..+.. .+++..|++. +..||||++|..+...+.
T Consensus 665 ---g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~ 739 (902)
T 2oaj_A 665 ---GKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKG 739 (902)
T ss_dssp ---GCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEE
T ss_pred ---CCEEEEECCCEECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEE--CCCEEEEECCCCCCEEEE
T ss_conf ---868999667244078896479985866879736688789725577887773999993--540599967533512367
Q ss_pred CCCCEEEEE-----------CCCCCCEEEEEC-CCCEEEEC
Q ss_conf 234212210-----------067774014724-99499991
Q 001621 791 SLMSILRWN-----------FKANMDKTISAD-NGQITLAN 819 (1043)
Q Consensus 791 ~l~~~~~~~-----------~~~~~~~~i~~s-dg~~~l~~ 819 (1043)
.-+.+..++ |++++...+|.+ ||.+.+++
T Consensus 740 ~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s 780 (902)
T 2oaj_A 740 FKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFT 780 (902)
T ss_dssp CSSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEE
T ss_conf 25620144777887013555446736999992799599997
Done!