Query 001623
Match_columns 1042
No_of_seqs 220 out of 309
Neff 6.1
Searched_HMMs 29240
Date Tue Mar 26 16:35:56 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001623.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_920-923//hhsearch_pdb/001623hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b3u_A Protein (protein phosph 1.0 1 1 49.2 11.8 132 287-422 173-307 (588)
2 1b3u_A Protein (protein phosph 1.0 1 1 49.2 11.2 123 291-420 139-266 (588)
3 1te4_A Conserved protein MTH18 1.0 1 1 42.2 -1.6 98 306-421 1-98 (131)
4 3ltm_A Alpha-REP4; protein eng 1.0 1 1 41.7 11.5 106 289-419 61-166 (211)
5 1oyz_A Hypothetical protein YI 1.0 1 1 41.4 11.6 18 327-344 101-118 (280)
6 3ltm_A Alpha-REP4; protein eng 1.0 1 1 41.3 10.0 108 288-420 91-198 (211)
7 4fdd_A Transportin-1; heat rep 1.0 1 1 40.9 13.2 104 286-391 182-287 (852)
8 4hxt_A De novo protein OR329; 1.0 1 1 40.7 8.8 97 291-389 57-157 (252)
9 3ltj_A Alpharep-4; protein eng 1.0 1 1 40.5 12.0 26 319-344 78-103 (201)
10 3ltj_A Alpharep-4; protein eng 1.0 1 1 40.4 10.5 108 288-420 86-193 (201)
No 1
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=1.00 E-value=1 Score=49.24 Aligned_cols=132 Identities=17% Similarity=0.136 Sum_probs=97.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 26787369999999999988428200033011235632137998548999999999635068970108889999899996
Q 001623 287 YRDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMI 366 (1042)
Q Consensus 287 yRDv~p~IR~~Ci~eLG~Wi~~yP~~FL~d~YLKYlGW~L~Dk~~~VR~~~L~aL~~Ly~~~~~~~~L~lFt~RFk~Rlv 366 (1042)
..|-+|.+|..+++.||.+....+.....+..+.++--.++|.+..||..++.+|..+...-. -..+...+.+.+.
T Consensus 173 ~~d~~~~VR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~----~~~~~~~~~~~l~ 248 (588)
T 1b3u_A 173 CSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLP----QEDLEALVMPTLR 248 (588)
T ss_dssp HTCSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSC----HHHHHHHTHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHH
T ss_conf 489978899999998999999816776799999999988249928899989999999998579----8888878999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHC-C--CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 640466446999999999999845-9--9998871347755327997899999999999
Q 001623 367 ELADDIDVSVAVCAIGLVKQLLRH-Q--LLPDDDLGPLYDLLIDDPPEIRRAIGELVYD 422 (1042)
Q Consensus 367 eM~~D~D~~Vav~AI~Ll~~l~~~-~--~L~~~d~~~v~~Lifd~~~~Ir~AAg~fv~~ 422 (1042)
.+..|.++.||..|++.+..+... + ...++-+..+..++-|.++.||.+|...+..
T Consensus 249 ~~~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~ 307 (588)
T 1b3u_A 249 QAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKE 307 (588)
T ss_dssp HHHTCSSHHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 98069977899999999999999819521055899999998589958999999987999
No 2
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=1.00 E-value=1 Score=49.20 Aligned_cols=123 Identities=18% Similarity=0.160 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 73699999999999884282000330112356321379985489999999996350689701088899998999966404
Q 001623 291 DPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELAD 370 (1042)
Q Consensus 291 ~p~IR~~Ci~eLG~Wi~~yP~~FL~d~YLKYlGW~L~Dk~~~VR~~~L~aL~~Ly~~~~~~~~L~lFt~RFk~RlveM~~ 370 (1042)
.+.+|..++.-+|.-....+.. ..+..+..+.-.+.|.++.||..++.+|..+.+.-. -..+...+-+-+..+..
T Consensus 139 ~~~~R~~a~~~l~~~~~~~~~~-~~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~----~~~~~~~l~~~l~~~~~ 213 (588)
T 1b3u_A 139 WFTSRTSACGLFSVCYPRVSSA-VKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLE----LDNVKSEIIPMFSNLAS 213 (588)
T ss_dssp SHHHHHHHGGGHHHHTTTSCHH-HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSC----HHHHHHTHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHC
T ss_conf 7179999999999999856999-999999999998489978899999998999999816----77679999999998824
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCC-----HHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 664469999999999998459999887-----13477553279978999999999
Q 001623 371 DIDVSVAVCAIGLVKQLLRHQLLPDDD-----LGPLYDLLIDDPPEIRRAIGELV 420 (1042)
Q Consensus 371 D~D~~Vav~AI~Ll~~l~~~~~L~~~d-----~~~v~~Lifd~~~~Ir~AAg~fv 420 (1042)
|.+..||..|+..+..+...- ++++ ...+..++-|.+..||.+|...+
T Consensus 214 d~~~~vr~~a~~~l~~l~~~~--~~~~~~~~~~~~l~~~~~d~~~~vR~~a~~~l 266 (588)
T 1b3u_A 214 DEQDSVRLLAVEACVNIAQLL--PQEDLEALVMPTLRQAAEDKSWRVRYMVADKF 266 (588)
T ss_dssp CSCHHHHTTHHHHHHHHHHHS--CHHHHHHHTHHHHHHHHTCSSHHHHHHHHHTH
T ss_pred CCCHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 992889998999999999857--98888878999999980699778999999999
No 3
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=1.00 E-value=1 Score=42.15 Aligned_cols=98 Identities=19% Similarity=0.200 Sum_probs=55.4
Q ss_pred HHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 84282000330112356321379985489999999996350689701088899998999966404664469999999999
Q 001623 306 ILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVK 385 (1042)
Q Consensus 306 i~~yP~~FL~d~YLKYlGW~L~Dk~~~VR~~~L~aL~~Ly~~~~~~~~L~lFt~RFk~RlveM~~D~D~~Vav~AI~Ll~ 385 (1042)
|-.||.+..++.+...+-..|.|+++.||..++.+|..+-.. . + +.++.+..|.|..||..|+..+.
T Consensus 1 ~~~~~~~~~~~~~~~~l~~~L~~~~~~vR~~A~~~L~~~~~~-----~-------~-~~L~~~L~d~~~~vR~~A~~aL~ 67 (131)
T 1te4_A 1 MGSSHHHHHHSSGLVPRGSHMADENKWVRRDVSTALSRMGDE-----A-------F-EPLLESLSNEDWRIRGAAAWIIG 67 (131)
T ss_dssp --------------------CCSSCCCSSSSCCSSTTSCSST-----T-------H-HHHHHGGGCSCHHHHHHHHHHHG
T ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCH-----H-------H-HHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 986644323445288999986399999999999999873736-----7-------9-99999886999999999999998
Q ss_pred HHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 998459999887134775532799789999999999
Q 001623 386 QLLRHQLLPDDDLGPLYDLLIDDPPEIRRAIGELVY 421 (1042)
Q Consensus 386 ~l~~~~~L~~~d~~~v~~Lifd~~~~Ir~AAg~fv~ 421 (1042)
.+-. ++-+..+..++-|.++.||.+|..-+-
T Consensus 68 ~~~~-----~~a~~~L~~~L~d~~~~VR~~A~~aL~ 98 (131)
T 1te4_A 68 NFQD-----ERAVEPLIKLLEDDSGFVRSGAARSLE 98 (131)
T ss_dssp GGCS-----HHHHHHHHHHHHHCCTHHHHHHHHHHH
T ss_pred HCCC-----HHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 5187-----779999999983998999999999999
No 4
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=1.00 E-value=1 Score=41.73 Aligned_cols=106 Identities=23% Similarity=0.246 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 78736999999999998842820003301123563213799854899999999963506897010888999989999664
Q 001623 289 DIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIEL 368 (1042)
Q Consensus 289 Dv~p~IR~~Ci~eLG~Wi~~yP~~FL~d~YLKYlGW~L~Dk~~~VR~~~L~aL~~Ly~~~~~~~~L~lFt~RFk~RlveM 368 (1042)
|-++.+|..++..||..- ++..+..+--.|.|+++.||..++.+|..+-.. ...+.++++
T Consensus 61 ~~~~~vr~~a~~aL~~~~--------~~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~------------~~~~~L~~~ 120 (211)
T 3ltm_A 61 DEDAWVRRAAADALGQIG--------DERAVEPLIKALKDEDGWVRQSAAVALGQIGDE------------RAVEPLIKA 120 (211)
T ss_dssp CSCHHHHHHHHHHHHHHC--------CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCG------------GGHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHC--------CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH------------HHHHHHHHH
T ss_conf 999999999999998658--------889999999987599889999999999985769------------999999998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 046644699999999999984599998871347755327997899999999
Q 001623 369 ADDIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLIDDPPEIRRAIGEL 419 (1042)
Q Consensus 369 ~~D~D~~Vav~AI~Ll~~l~~~~~L~~~d~~~v~~Lifd~~~~Ir~AAg~f 419 (1042)
..|.+..|+..|+..+..+- .++-+..+..++-|.++.||.+|..-
T Consensus 121 l~d~~~~vr~~a~~aL~~~~-----~~~~~~~L~~~l~d~~~~vr~~a~~a 166 (211)
T 3ltm_A 121 LKDEDWFVRIAAAFALGEIG-----DERAVEPLIKALKDEDGWVRQSAADA 166 (211)
T ss_dssp TTCSSHHHHHHHHHHHHHHC-----CGGGHHHHHHHTTCSSHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHCC-----CHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 73989999999999998719-----87799999998759989999999999
No 5
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=1.00 E-value=1 Score=41.40 Aligned_cols=18 Identities=39% Similarity=0.466 Sum_probs=6.3
Q ss_pred CCCCHHHHHHHHHHHHHH
Q ss_conf 799854899999999963
Q 001623 327 NDKSASVRKSSVLALQNL 344 (1042)
Q Consensus 327 ~Dk~~~VR~~~L~aL~~L 344 (1042)
+|+++.||..++.+|..+
T Consensus 101 ~d~~~~vr~~a~~aL~~l 118 (280)
T 1oyz_A 101 NDKSACVRATAIESTAQR 118 (280)
T ss_dssp HCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
T ss_conf 499899999999999987
No 6
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=1.00 E-value=1 Score=41.27 Aligned_cols=108 Identities=19% Similarity=0.140 Sum_probs=43.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 67873699999999999884282000330112356321379985489999999996350689701088899998999966
Q 001623 288 RDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIE 367 (1042)
Q Consensus 288 RDv~p~IR~~Ci~eLG~Wi~~yP~~FL~d~YLKYlGW~L~Dk~~~VR~~~L~aL~~Ly~~~~~~~~L~lFt~RFk~Rlve 367 (1042)
.|-+|.+|..++..||..- ++..+..+--.|.|+++.||..++.+|..+-. + .-.+.++.
T Consensus 91 ~~~~~~vr~~a~~aL~~~~--------~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~-~-----------~~~~~L~~ 150 (211)
T 3ltm_A 91 KDEDGWVRQSAAVALGQIG--------DERAVEPLIKALKDEDWFVRIAAAFALGEIGD-E-----------RAVEPLIK 150 (211)
T ss_dssp TCSSHHHHHHHHHHHHHHC--------CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-G-----------GGHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHC--------CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC-H-----------HHHHHHHH
T ss_conf 5998899999999999857--------69999999998739899999999999987198-7-----------79999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 40466446999999999999845999988713477553279978999999999
Q 001623 368 LADDIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLIDDPPEIRRAIGELV 420 (1042)
Q Consensus 368 M~~D~D~~Vav~AI~Ll~~l~~~~~L~~~d~~~v~~Lifd~~~~Ir~AAg~fv 420 (1042)
+..|.+..|+..|+..+..+.. ++-...+..++-|.++.||.+|.+-+
T Consensus 151 ~l~d~~~~vr~~a~~aL~~~~~-----~~~~~~L~~~l~d~~~~vr~~A~~aL 198 (211)
T 3ltm_A 151 ALKDEDGWVRQSAADALGEIGG-----ERVRAAMEKLAETGTGFARKVAVNYL 198 (211)
T ss_dssp HTTCSSHHHHHHHHHHHHHHCS-----HHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHCC-----HHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 8759989999999999987296-----65899999998599889999999999
No 7
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=1.00 E-value=1 Score=40.85 Aligned_cols=104 Identities=23% Similarity=0.278 Sum_probs=78.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCC--CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 026787369999999999988428200033--011235632137998548999999999635068970108889999899
Q 001623 286 RYRDIDPNIRMSCIQSLGVWILSYPSFFLQ--DLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSN 363 (1042)
Q Consensus 286 RyRDv~p~IR~~Ci~eLG~Wi~~yP~~FL~--d~YLKYlGW~L~Dk~~~VR~~~L~aL~~Ly~~~~~~~~L~lFt~RFk~ 363 (1042)
-..|.++++|..++..|+.++...|..+.. +.+++.+.-.++|++.+||..++.+|..+.+.. ...+..+...+-+
T Consensus 182 ~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~--~~~~~~~l~~l~~ 259 (852)
T 4fdd_A 182 FFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVR--MDRLLPHMHNIVE 259 (852)
T ss_dssp TTTCSSHHHHHHHHHHHHTTTTTTCHHHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHC--HHHHGGGHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC--HHHHHHHHHHHHH
T ss_conf 85679789999999999999864638799889999999998717997789999999999999857--7989988999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 9966404664469999999999998459
Q 001623 364 RMIELADDIDVSVAVCAIGLVKQLLRHQ 391 (1042)
Q Consensus 364 RlveM~~D~D~~Vav~AI~Ll~~l~~~~ 391 (1042)
-++....|.|.+||..|+..+..+.+..
T Consensus 260 ~l~~~~~~~~~~vr~~a~e~l~~l~~~~ 287 (852)
T 4fdd_A 260 YMLQRTQDQDENVALEACEFWLTLAEQP 287 (852)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHTTST
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHCCH
T ss_conf 9998706996899999999999986036
No 8
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=1.00 E-value=1 Score=40.73 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHHHHHCC---CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHH
Q ss_conf 73699999999999884282---0003301123563213799854899999999963506-8970108889999899996
Q 001623 291 DPNIRMSCIQSLGVWILSYP---SFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEV-DDNVPTLGLFTERFSNRMI 366 (1042)
Q Consensus 291 ~p~IR~~Ci~eLG~Wi~~yP---~~FL~d~YLKYlGW~L~Dk~~~VR~~~L~aL~~Ly~~-~~~~~~L~lFt~RFk~Rlv 366 (1042)
++++|..++..|+.-....| ..+.+...+..+-..|.+.+.+||..++.+|..|-.. ++.. -.......-+.++
T Consensus 57 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~--~~~~~~~~i~~L~ 134 (252)
T 4hxt_A 57 DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAI--KAIVDAGGVEVLV 134 (252)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHH--HHHHHTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH--HHHHHCCCHHHHH
T ss_conf 88999999999999876985899999988987999998818978899999999999985998999--9999888799999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 64046644699999999999984
Q 001623 367 ELADDIDVSVAVCAIGLVKQLLR 389 (1042)
Q Consensus 367 eM~~D~D~~Vav~AI~Ll~~l~~ 389 (1042)
.+..+.+..|+..|+..+..|..
T Consensus 135 ~~l~~~~~~~~~~a~~~L~~l~~ 157 (252)
T 4hxt_A 135 KLLTSTDSEVQKEAARALANIAS 157 (252)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 99869988999999999999986
No 9
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=1.00 E-value=1 Score=40.54 Aligned_cols=26 Identities=31% Similarity=0.368 Sum_probs=10.1
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 23563213799854899999999963
Q 001623 319 LKYLGWTLNDKSASVRKSSVLALQNL 344 (1042)
Q Consensus 319 LKYlGW~L~Dk~~~VR~~~L~aL~~L 344 (1042)
+..+--.|.|+++.||..++.+|..+
T Consensus 78 ~~~L~~~l~d~~~~vr~~a~~aL~~~ 103 (201)
T 3ltj_A 78 VEPLIKALKDEDGWVRQSAAVALGQI 103 (201)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 99999988599789999999999974
No 10
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=1.00 E-value=1 Score=40.45 Aligned_cols=108 Identities=19% Similarity=0.124 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 67873699999999999884282000330112356321379985489999999996350689701088899998999966
Q 001623 288 RDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIE 367 (1042)
Q Consensus 288 RDv~p~IR~~Ci~eLG~Wi~~yP~~FL~d~YLKYlGW~L~Dk~~~VR~~~L~aL~~Ly~~~~~~~~L~lFt~RFk~Rlve 367 (1042)
.|-+|.+|..++..||..- ++..+..+--.|.|+++.||..++.+|..+-.. ...+.++.
T Consensus 86 ~d~~~~vr~~a~~aL~~~~--------~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~------------~~~~~L~~ 145 (201)
T 3ltj_A 86 KDEDGWVRQSAAVALGQIG--------DERAVEPLIKALKDEDWFVRIAAAFALGEIGDE------------RAVEPLIK 145 (201)
T ss_dssp TCSSHHHHHHHHHHHHHHC--------CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHTCG------------GGHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHC--------CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH------------HHHHHHHH
T ss_conf 5997899999999999748--------688999999997399899999999999985887------------89999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 40466446999999999999845999988713477553279978999999999
Q 001623 368 LADDIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLIDDPPEIRRAIGELV 420 (1042)
Q Consensus 368 M~~D~D~~Vav~AI~Ll~~l~~~~~L~~~d~~~v~~Lifd~~~~Ir~AAg~fv 420 (1042)
+..|.+..|+..|+..+..+- .++-...+..++-|.++.||.+|.+-+
T Consensus 146 ~l~d~~~~vr~~A~~aL~~~~-----~~~~~~~L~~~l~d~~~~vr~~A~~aL 193 (201)
T 3ltj_A 146 ALKDEDGWVRQSAADALGEIG-----GERVRAAMEKLAETGTGFARKVAVNYL 193 (201)
T ss_dssp HTTCSSHHHHHHHHHHHHHHC-----SHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 975998899999999999868-----646899999988389878999999999
Done!