BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001625
(1042 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554092|ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
gi|223542682|gb|EEF44219.1| conserved hypothetical protein [Ricinus communis]
Length = 1006
Score = 1134 bits (2932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1054 (58%), Positives = 758/1054 (71%), Gaps = 60/1054 (5%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKPVESTDD--GVPVMKERKPCPHLDKGID 58
MGKR ++KSR+ K+K+ + +PK QQ+ P ++ V V+KERK C HL KG +
Sbjct: 1 MGKRVKKKSRSLQ-KEKRVSTHSPKVAPQQTTPSVDVNERITVAVVKERKQCVHLGKGFN 59
Query: 59 SDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGS--SLVDSKAIWVCLGCGHY 116
+ ++VK+GSSDP++CEDCREGV DRRG KGKGKHGKKKGS S +SKAIWVCL CGH+
Sbjct: 60 LNNLTVKLGSSDPLKCEDCREGVADRRGAKGKGKHGKKKGSVDSKSESKAIWVCLECGHF 119
Query: 117 ACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDAL 176
ACGGVGLPTTPQSHVVRHARQTRHPL+IQWENPHLRWCFPCNTLIPVE TEENGE KDAL
Sbjct: 120 ACGGVGLPTTPQSHVVRHARQTRHPLIIQWENPHLRWCFPCNTLIPVEMTEENGEKKDAL 179
Query: 177 SEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLG 236
+VV LIK RS++ S VDVED WFG G+V SEIK+E T++S ++ G + Y VRGL NLG
Sbjct: 180 LDVVNLIKTRSSQRSLVDVEDVWFGGGSVASEIKAEGTILSSTE--GKSGYTVRGLVNLG 237
Query: 237 NTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFG 296
NTCFFNSVMQNLLA+ +L+D+F N +++FGPLTIALKKLF ETK ETG++NVI+PRSFFG
Sbjct: 238 NTCFFNSVMQNLLAIDKLRDFFFNQDISFGPLTIALKKLFTETKQETGIKNVISPRSFFG 297
Query: 297 CICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
ICSKAPQF+GYQQ DSHELLR LLDGL SEELA RK+ + S+ NGISS GP FVD +F
Sbjct: 298 SICSKAPQFRGYQQQDSHELLRYLLDGLSSEELAVRKQVNASKENGISSKHGPTFVDVLF 357
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIR 416
GG+I STV C+EC +SSTVYEPFLDLSLPVPTKK +KK QPASR+KKTKLP K+ GR+R
Sbjct: 358 GGRICSTVSCIECEYSSTVYEPFLDLSLPVPTKKPATKKAQPASRSKKTKLPLKRGGRVR 417
Query: 417 AKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQC 476
AK KDT AV QS SN S+SS+S T S P +EN ++SSG L+SV TVA +
Sbjct: 418 AKANKDTDAVPAQSSSNPSVSSESPCQTLSIIPHAENSMASSGDVVGLESVCLTTVADKS 477
Query: 477 GSALQNVPADPLPQHDQVIDIPVEQTVASLDDF-WLDYIEPQTTGDVLDSTWQKSDVSVI 535
G A QN P +++QV + VEQT S DDF W+DY+ +T D
Sbjct: 478 GLASQNFSTIPDTENEQVTEGTVEQTTNSFDDFSWMDYLGQETVTD-------------- 523
Query: 536 QDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDDSLINSNQIPLLDSKP 595
EH LTL+N D Q S ++ + +D ++ S+Q+ +D +P
Sbjct: 524 -------------------EHDLTLQNKDASTSQFS--ENIIPNDDIMESSQVSPVDGEP 562
Query: 596 NLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQEEVD 655
NLK +SS + E+E+ V+ SEV+LLPY EE + + G+ EA SSVVGC Q+E D
Sbjct: 563 NLKLESSV-NPWEEEVLAQVKSSEVLLLPYKEESVMDGDVMKGQAEA-SSVVGCGQDEAD 620
Query: 656 FDGFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVH 715
FDGFGDLFNEPE + GPV PS + +GF+ N+S+SDPDEVD+SDSPVS+ESCL H
Sbjct: 621 FDGFGDLFNEPEVSSGPVSGPSLANGTAETGFIAANNSESDPDEVDNSDSPVSIESCLAH 680
Query: 716 FIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQNDIQGSSLTD 775
FIKPELL++DNAW+CE+CSKTLQRQ+LEA K++AK + +I GG+ IQ S +
Sbjct: 681 FIKPELLSNDNAWECENCSKTLQRQRLEA-KKKAKTTVETMIIGGKA----QIQSPSSLE 735
Query: 776 VDSLC-------NGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQ 828
D+LC NG T+ N+ SLVS D NQ+ + ESG T+++NP Q
Sbjct: 736 KDNLCSIEVKDHNGGINTDTCFNSSGASLVSDDENIDRTNQNYIKTESGQTDELNPIETQ 795
Query: 829 REKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQL 888
++ K ++ A+ QS SS SCSQES + GS SV +S+GY+ K DSQ
Sbjct: 796 GDEQKGEMTVALMEQSLSSSTYKSCSQESFSCPVVGSSSVGEPSSTGYATAKDQMGDSQF 855
Query: 889 VAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGH 948
+GNC ++E EE S+ VKVKRDATKRVL++KAPPILTIHLKRFSQDARGRLSKLNGH
Sbjct: 856 -SGNCGAKED--EEGTSRKVKVKRDATKRVLVDKAPPILTIHLKRFSQDARGRLSKLNGH 912
Query: 949 VNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKES 1008
VNF ++++LRPYMDP CTD + Y YRL+GVVEHLGTMRGGHYVAYVRGG K+K KA+ ES
Sbjct: 913 VNFGDVLDLRPYMDPRCTDREKYVYRLLGVVEHLGTMRGGHYVAYVRGGQKSKGKAENES 972
Query: 1009 VGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
VWYHASD YVREVSLEEVLRCEAYILFYEKI
Sbjct: 973 GSSVWYHASDAYVREVSLEEVLRCEAYILFYEKI 1006
>gi|224140825|ref|XP_002323779.1| predicted protein [Populus trichocarpa]
gi|222866781|gb|EEF03912.1| predicted protein [Populus trichocarpa]
Length = 910
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/1047 (51%), Positives = 679/1047 (64%), Gaps = 144/1047 (13%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKPVESTDDGVPVMKERKPCPHLDKGIDSD 60
MGKRA +K K+K+ A +P V +Q+ P DGV +KERK C H DKG D++
Sbjct: 1 MGKRANKKKARPPQKEKRVAGHSPNIVPEQANPNVEIVDGVTAVKERKLCSHFDKGFDAN 60
Query: 61 KISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSK----AIWVCLGCGHY 116
K+S KI S D +RCEDCREGVGDR+G KG+GK KKKGS VDSK AIWVCL CGH
Sbjct: 61 KLSDKIRSLDSLRCEDCREGVGDRKGAKGRGKQAKKKGSGSVDSKSQSKAIWVCLECGHL 120
Query: 117 ACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDAL 176
ACGGVGLPTT QSH VRH++Q+RHPLV QWENP L+WCFPCNTLIPVEKTE NGE KD++
Sbjct: 121 ACGGVGLPTTAQSHAVRHSKQSRHPLVFQWENPQLQWCFPCNTLIPVEKTEGNGEKKDSV 180
Query: 177 SEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLG 236
EVVK IK +S E SSVD D W G G++ SE+ +E T + S+ G + +VVRGL NLG
Sbjct: 181 FEVVKTIKAQSFEQSSVDAVDVWIGRGSILSELNAEGTEATSSE--GRSGHVVRGLVNLG 238
Query: 237 NTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFG 296
NTCFFNSVMQNLL+M++L+DY LN E + GPL+IALKKLF + + E LRNVINP+SFFG
Sbjct: 239 NTCFFNSVMQNLLSMNKLRDY-LNEEASLGPLSIALKKLFTDLQAEASLRNVINPKSFFG 297
Query: 297 CICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
+CSKAPQF+GYQQ DSHELL CLLDGL +EEL RKR + S+ +GI GP FVD F
Sbjct: 298 SVCSKAPQFRGYQQQDSHELLCCLLDGLSTEELIVRKRRNASKEDGIPPKHGPTFVDSAF 357
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIR 416
GG+I+STV CVECGHSS ++EPFLDLSLPVP KK P KK QP SRAKKTKLPPK+ G+++
Sbjct: 358 GGRISSTVCCVECGHSSIMHEPFLDLSLPVPMKKPPIKKVQPVSRAKKTKLPPKRGGKVQ 417
Query: 417 AKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQC 476
K K+ +V Q+ISN S+ S+S T+S+ S+N ++
Sbjct: 418 PKVNKNMDSVPAQNISNPSVHSESSCQTQSS---SDNTLA-------------------- 454
Query: 477 GSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWLDYIEPQTTGDVLDSTWQKSDVSVIQ 536
P +P Q ++ +EQT +S +DFW+DY+ P+TT
Sbjct: 455 -------PDSTVPSTAQAVETTMEQTASSFEDFWMDYVGPETT----------------- 490
Query: 537 DSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDDSLINSNQIPLLDSKPN 596
SDEH LT ENND+ G++ ++ +D L+ + Q +D +PN
Sbjct: 491 ----------------SDEHDLTSENNDLAAGWQCGDKFDIPNDGLMETCQASSIDGEPN 534
Query: 597 LKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQEEVDF 656
K +SSS + E+E+P VQ SEV+LLPY EE T E + GE EASSS VGC Q+E +F
Sbjct: 535 QKPESSSVNPWEEEVPFQVQSSEVLLLPYREEGYTDGEIMKGEAEASSSFVGCEQDEAEF 594
Query: 657 DGFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHF 716
DG GDLFNEPE + PV PS E G F+ G S+SDPDEVDD+DSPVS+ESCL HF
Sbjct: 595 DGIGDLFNEPEVSAAPVAGPSLPNEVAGPVFIAGIGSESDPDEVDDTDSPVSIESCLSHF 654
Query: 717 IKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGG-ETSNQNDIQGSSLTD 775
+KPELL++DNAW+CE+CSK LQ+Q+L+A K++AK++SK L+NGG ++SN+ IQ
Sbjct: 655 VKPELLSNDNAWECENCSKILQQQRLDAKKKQAKISSKTLLNGGNDSSNKKFIQ------ 708
Query: 776 VDSLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQREKGKMK 835
AE+ + ++ P + Q E+ K +
Sbjct: 709 ------------------------------------AEI---VQTEMEPFISQSEERKYE 729
Query: 836 INDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCES 895
+N S SS +SC+ E+++ SCSVD +K
Sbjct: 730 MN-----VSHSSGYYESCNGETLSGPPVDSCSVDETRDVNEDEDKT-------------- 770
Query: 896 EESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEII 955
SK + VKRDATKRVLI+KAPPILTIHLKRFSQDARGRL KL+GHV F +++
Sbjct: 771 ---------SKKLNVKRDATKRVLIDKAPPILTIHLKRFSQDARGRLCKLSGHVTFRDVL 821
Query: 956 NLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYH 1015
+L PYMDP C D + Y YRL+GVVEHLGTMRGGHY+AYVRG +NK KA KE G VWY+
Sbjct: 822 DLGPYMDPRCVDTERYVYRLLGVVEHLGTMRGGHYIAYVRGDERNKGKADKEQGGSVWYY 881
Query: 1016 ASDVYVREVSLEEVLRCEAYILFYEKI 1042
ASD +VREVSLEEVLRC+AY+LFYEK+
Sbjct: 882 ASDAHVREVSLEEVLRCDAYLLFYEKV 908
>gi|147805668|emb|CAN67276.1| hypothetical protein VITISV_042515 [Vitis vinifera]
Length = 1036
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1084 (52%), Positives = 706/1084 (65%), Gaps = 90/1084 (8%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKPV-ESTDDGVPVMKERKPCPHLDKGIDS 59
MGK+ ++K R K+K+ +A + K+V QQ P E+ DG V+K R+PC H +KG+D
Sbjct: 1 MGKKVKKKGRTGH-KEKRGSASSLKNVPQQCNPSSETVADGNTVVKGREPCIHFNKGVDL 59
Query: 60 DKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGS---SLVDSKAIWVCLGCGHY 116
KIS K G +PIRCEDCREG DRRG + KGKHGKK S +SKAIWVCL CGH+
Sbjct: 60 GKISAKFGLPEPIRCEDCREGTIDRRGNRAKGKHGKKGSGSVDSKSESKAIWVCLECGHF 119
Query: 117 ACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDAL 176
ACGGVGLPTTPQSH VRHAR TRHPLVIQ+ENPHLRWCFPC +IPV+K E N D L
Sbjct: 120 ACGGVGLPTTPQSHAVRHARLTRHPLVIQFENPHLRWCFPCKMVIPVDKMEAN----DML 175
Query: 177 SEVVKLIKGRSTEISSVDVEDAWFGSGNV--------NSEIKSESTVVSGSDLDGNACYV 228
++VKL+KGRS + SVD ED W+G G+V N EI ++T+ DLD YV
Sbjct: 176 LDIVKLVKGRSVKGPSVDGEDVWYGGGSVKNEKTPDNNLEIIRDNTL--SGDLDERDSYV 233
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNV 288
VRGL N+GNTCFFNS+MQNLLAM+ L+DYFL + + GPLT A +KLF ET TGLRNV
Sbjct: 234 VRGLINIGNTCFFNSIMQNLLAMNNLRDYFLKLDGSIGPLTSAFRKLFDETSSGTGLRNV 293
Query: 289 INPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQG 348
INP+S FGC+C+KAPQF+GYQQ DSHELLRCLLDGLC+EEL RKR + S+ +GIS N+
Sbjct: 294 INPKSVFGCVCAKAPQFRGYQQQDSHELLRCLLDGLCTEELGARKRANSSQEDGISPNEA 353
Query: 349 PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLP 408
P FVD +FGGQI+STV CVECGHSSTVYEPFLDLSLPVPTKK PS+KTQP SR KKTKLP
Sbjct: 354 PTFVDTMFGGQISSTVCCVECGHSSTVYEPFLDLSLPVPTKKPPSRKTQPVSRPKKTKLP 413
Query: 409 PKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVG 468
PKK+GR+R+K KD ++ QS+ + S S + +S+AP++E +VSSSG S D V
Sbjct: 414 PKKAGRVRSKVNKDADSLVAQSVQHPSSDGDSSNQIQSSAPVAEKLVSSSGDSAGSDLVS 473
Query: 469 SPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLDDF----------WLDYIEPQT 518
VA S +N+ ++ QV + E A DDF WLDY++P
Sbjct: 474 PCAVADVKDSVSKNISTSEEFENKQVFENVTETKAAPSDDFTLLDCSDTFTWLDYLDPGA 533
Query: 519 TGDVLDSTWQKSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVS 578
DV + Q DVSVI QDSG QD V
Sbjct: 534 VLDVHNVASQNKDVSVI---------------------------------QDSGNQDNVQ 560
Query: 579 DDSLIN-----SNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTA 633
+D L+ S Q+ +PNLK DS S ++ E+ELP+ +Q SEV+LLPY EE ST
Sbjct: 561 NDVLLQNASEFSCQVYPHKGEPNLKIDSCSANSWEEELPVQIQSSEVLLLPYKEETSTAV 620
Query: 634 EKISGEGEASSSVVGCRQEEVDFDGFGDLFNEPETAIGPVPRPSSG------TESVGSGF 687
E +G+ S V G +E +DFDGFG LF+EPE A G +P G E VG+GF
Sbjct: 621 EITTGQ-VGPSVVSGSNEELLDFDGFGGLFDEPEAASGVNLQPLLGDNSFDANEVVGTGF 679
Query: 688 VVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKR 747
+ NSS+SDPDEVD+S+S VS++SCL +F KPELL++++AW CE+CSK L+ Q+++
Sbjct: 680 INRNSSESDPDEVDNSNSMVSIDSCLTYFTKPELLSNEHAWHCENCSKILRDQRIKTRTN 739
Query: 748 RAKLASKPLINGGETSNQN-------DIQGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQ 800
SK +NG E QN DI + D+D + ND + L
Sbjct: 740 LPNTISKIQMNGSEDKIQNGPFGLCKDISPDEVKDID-----NENVKNDGHNILGGLAPH 794
Query: 801 SGKT-DCFNQDCAEVESGLTNDVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESIT 859
+ D Q+ ++++ T +VNP V Q E GK K+N A+ S SS +CSQ S++
Sbjct: 795 DRISDDDSKQNGLKLQTSQTVEVNPVVSQCEGGKSKMNYALPDLSHSSDTYKTCSQASLS 854
Query: 860 DQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVL 919
D SCSV S G + K Q +SQ++ G ESEE + +E++S+ VKVKRDATKR+L
Sbjct: 855 DPASDSCSVHEPNSVGCNTGK--QRNSQMLTGELESEEDEDKEMDSESVKVKRDATKRIL 912
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVV 979
INKAPPILTIHLKRFSQDARGR +KLNGHV F + I+LRP+M+P C + Y+YRLVGVV
Sbjct: 913 INKAPPILTIHLKRFSQDARGRYNKLNGHVVFKDSIDLRPFMEPRCVEKGKYEYRLVGVV 972
Query: 980 EHLGTMRGGHYVAYVRGGP-KNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILF 1038
EH G+MR GHYVAYVRGG K+ +AKKES GVWY+ASD VRE SL+EVLRCEAYILF
Sbjct: 973 EHSGSMRMGHYVAYVRGGERKSSGQAKKESGRGVWYYASDASVRETSLDEVLRCEAYILF 1032
Query: 1039 YEKI 1042
YEKI
Sbjct: 1033 YEKI 1036
>gi|356569135|ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
Length = 980
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/1053 (50%), Positives = 683/1053 (64%), Gaps = 84/1053 (7%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKP-VESTDDGVPVMKERKPCPHLDKGIDS 59
MGK+ +K+R +A K+ A P V++ S P VES D+ V KE CPHL KG++
Sbjct: 1 MGKKVRKKTRGSA-KEMGVATHLPIKVIESSNPTVESFDE---VAKETNSCPHLVKGVNF 56
Query: 60 DKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA----IWVCLGCGH 115
D++S K+GSS IRCEDCREG +RR KGKGKHGKKKG + +DSK+ IWVCL CG
Sbjct: 57 DRLSTKVGSSGSIRCEDCREGATNRRSGKGKGKHGKKKGGASLDSKSESKSIWVCLECGQ 116
Query: 116 YACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDA 175
Y CGGVGLP TP HVV HAR+ RHPLV+ ++ P L WCFPCN LI V+K E+ E+
Sbjct: 117 YTCGGVGLPITPHCHVVGHARKNRHPLVVHFDKPQLCWCFPCNMLIQVDKIEKTDESGHL 176
Query: 176 LSEVVKLIKGRSTEISSVDVEDAWFG-SGNVNSEIKSESTVVSGSDLDGNACYVVRGLAN 234
LS+VVKL+KGRS E SSVD+ED G G++ SEI S + + +D G YVVRG+ N
Sbjct: 177 LSDVVKLLKGRSQEKSSVDIEDVSVGDGGSITSEINSRA--LFANDSYGQGGYVVRGMIN 234
Query: 235 LGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSF 294
LGNTCFFNS+MQNLLAM++L+D FL + GPL +LKKLF ET PE+GL+NVINPRSF
Sbjct: 235 LGNTCFFNSIMQNLLAMNRLRDNFLKLDAPVGPLISSLKKLFTETNPESGLKNVINPRSF 294
Query: 295 FGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDY 354
FGC+CSK+PQF+GYQQHDSHELLRCLLDGL +EELA RK+N + +G SSN VD
Sbjct: 295 FGCVCSKSPQFRGYQQHDSHELLRCLLDGLSTEELAGRKQNGSPKRDGTSSN---TLVDA 351
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGR 414
+FGG I+STV C+ECGH STVYEPFLDLSLPVPTKK P +K Q R KK KLPPKK G+
Sbjct: 352 LFGGLISSTVCCIECGHFSTVYEPFLDLSLPVPTKKPPPRKAQQEPRTKKAKLPPKKGGK 411
Query: 415 IRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVAT 474
IR + +DT ++ Q+ SN S +S L +S ++ + + S S LL S +VA
Sbjct: 412 IRVRVNRDTDSLPVQTQSNQLSSPESSCLDQSIISVAGEMGTCSADSTLLVSEEIKSVAD 471
Query: 475 QCGSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWLDYIEPQTTGDVLDSTWQKSDVSV 534
+ + N+ QH QVID +T+
Sbjct: 472 KEDLSSPNLVTAGESQHTQVIDNGAMKTL------------------------------- 500
Query: 535 IQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDD-----SLINSNQIP 589
+F+WLDY+E ++E + D VQD+ +DE ++ + +S +
Sbjct: 501 ----DEFSWLDYVEAG--ANECDFISQKEDAPEVQDTESKDECLNELHGQATCESSGPVC 554
Query: 590 LLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGC 649
L NL SS + EDE+PL VQ SEV+LLPY EE S+ AE I G+GE SSSV+G
Sbjct: 555 FLKEDQNLSPTFSSANGWEDEVPLQVQGSEVLLLPYKEESSSAAEIIGGDGEGSSSVLGG 614
Query: 650 RQEEVDFDGFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSV 709
QEE++FDGFGDLFNEPE GP PRPSS +E + +GF++G++S+SDPDEVDD+DSPVSV
Sbjct: 615 GQEELEFDGFGDLFNEPEVVAGPAPRPSSCSEVMEAGFIIGSNSESDPDEVDDTDSPVSV 674
Query: 710 ESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQNDIQ 769
ESCL HFIKPELL+D+NAW CE+CSK LQ QK+E K++A+ S G + +
Sbjct: 675 ESCLAHFIKPELLSDENAWHCENCSKVLQHQKMEE-KKQARAVSDRNETGIHDEPWHAVN 733
Query: 770 GSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQR 829
S+ V ++ NGD K + ++ + KT+ +E+G ++++ V ++
Sbjct: 734 SCSVK-VRTIGNGDIKNDQNVQNL---VACDKHKTN--------LENGQRDELSLIVNEK 781
Query: 830 EKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLV 889
+ G ++ D + +SS ++C++ES + SC E V + DS ++
Sbjct: 782 DSGSFEMEDTHNDELQSSSFHNTCNEESCSHLAVDSCVT----------ENVQRRDSPMI 831
Query: 890 AGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV 949
S+ + EE +SK VKVKRDATKRVLI KAPP+LTIHLKRFSQDARGRLSKLNGHV
Sbjct: 832 G----SDNNDSEEADSKSVKVKRDATKRVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHV 887
Query: 950 NFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESV 1009
NF E +++RPY+DP C + + Y Y LVG+VEH GTMRGGHYVAYVRGG +N K KE+
Sbjct: 888 NFRETMDIRPYIDPRCINEEKYAYHLVGLVEHSGTMRGGHYVAYVRGGQRNCGKGDKENE 947
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY ASD YVREVSL+EVLRCEAYILFYEKI
Sbjct: 948 GSTWYQASDAYVREVSLDEVLRCEAYILFYEKI 980
>gi|356538039|ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
Length = 1052
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/1050 (51%), Positives = 684/1050 (65%), Gaps = 78/1050 (7%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKP-VESTDDGVPVMKERKPCPHLDKGIDS 59
MGK+ +K+R +A K+K A P V++ S P VES D+ V KE CPHL KG++
Sbjct: 73 MGKKVRKKTRGSA-KEKGVATHLPIKVIESSNPTVESVDE---VAKETNSCPHLVKGVNF 128
Query: 60 DKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA----IWVCLGCGH 115
D++S KIGSS +RCEDCREG DRR KGKGKH KKKG + +DSK+ IWVCL CG
Sbjct: 129 DRLSTKIGSSGSVRCEDCREGANDRRSGKGKGKHEKKKGGASLDSKSESKSIWVCLECGR 188
Query: 116 YACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDA 175
Y CGGVGLP TP HVV HAR+ RHPLV+ ++ P L WCFPCN L+ V+K E+ E+
Sbjct: 189 YTCGGVGLPITPHCHVVGHARKNRHPLVVHFDKPQLCWCFPCNMLVQVDKFEKTDESCHL 248
Query: 176 LSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANL 235
LS+VVKL+KGRS E SSVD+ED G ++ SEIKS + + +D G A YVVRG+ NL
Sbjct: 249 LSDVVKLLKGRSQEKSSVDIEDVSVGDDSITSEIKSRA--LFANDSYGQAGYVVRGMINL 306
Query: 236 GNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFF 295
GNTCFFNS+MQNLLAM++L+D FL + GPL +LKKLF ET PE+GL+NVINPRSFF
Sbjct: 307 GNTCFFNSIMQNLLAMNRLRDDFLKLDAPVGPLISSLKKLFTETNPESGLKNVINPRSFF 366
Query: 296 GCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYV 355
GC+CSK+PQF+GYQQHDSHELLRCLLDGL +EELA RK++ +G+G SSN VD +
Sbjct: 367 GCVCSKSPQFRGYQQHDSHELLRCLLDGLSTEELAGRKQSGSPKGDGTSSN---TLVDAL 423
Query: 356 FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRI 415
FGGQI+STV C+ECGH STVYEPFLDLS+PVPTKK P K Q R KK KLPPKK G+
Sbjct: 424 FGGQISSTVCCIECGHFSTVYEPFLDLSVPVPTKKPPPCKAQQVPRTKKAKLPPKKGGKT 483
Query: 416 RAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQ 475
R + +DT+ + Q+ SN SS+S +S ++ + + S S LL S +VA +
Sbjct: 484 RVRVNRDTYPLPVQTQSNQLSSSESSCPDQSVISVAGEMGTCSADSTLLGSEEIKSVADK 543
Query: 476 CGSALQNVPADPLPQHDQVIDIPVEQTVASLDDF-WLDYIEPQTTGDVLDSTWQKSDVSV 534
+ N+ QH QV+D + + D F WLDY+E T + D QK D
Sbjct: 544 EDLSSPNLVTPGESQHMQVLD---NGAIKTSDGFSWLDYVEAGT--NECDFISQKEDAPE 598
Query: 535 IQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDDSLINSNQIPLLDSK 594
+Q + + E +++ HG + +S + L
Sbjct: 599 VQGTES-------KDECLNELHGQAI---------------------CESSGLVCFLKED 630
Query: 595 PNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQEEV 654
NL SS + ED++PL VQ SEV+LLPY EE S+ AE I G+GEASSSV+G QEEV
Sbjct: 631 ENLSPKFSSANGWEDKVPLQVQGSEVLLLPYKEESSSAAEIIGGDGEASSSVLGGGQEEV 690
Query: 655 DFDGFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLV 714
+FDGFGDLFNEPE GP PRPSS E + +GF++ N S+SDPDEVDD+DSPVSVESCL
Sbjct: 691 EFDGFGDLFNEPEVVAGPAPRPSSCREVMEAGFIISN-SESDPDEVDDTDSPVSVESCLA 749
Query: 715 HFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQND-IQGSSL 773
HFIKPELL D+NAW CE+CSK LQ QK+E K+ A+ S +G ET ++ +
Sbjct: 750 HFIKPELLLDENAWHCENCSKFLQHQKMEE-KKHARAVS----DGNETGIYDEPWHAVNS 804
Query: 774 TDVDSLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQREKGK 833
V NG+ ND N E+LV+ ++ ++E+G ++++ V +R+ G
Sbjct: 805 CSVKVRTNGNGDIKNDTNV--ENLVA-------CDKHNTKLENGQRDELSLIVNERDSGS 855
Query: 834 MKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNC 893
++ D + +SS R++C++ES + SC + E V + DS ++ +
Sbjct: 856 SEMEDTHIDELQSSSFRNTCNEESCSHLAADSCVI----------ENVQRRDSPMIGNDN 905
Query: 894 ESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSE 953
E EE SK VKVKRDATKRVLI KAPP+LTIHLKRFSQDARGRLSKLNGHVNF E
Sbjct: 906 NDSE---EEAGSKSVKVKRDATKRVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHVNFRE 962
Query: 954 IINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVK-AKKESVGGV 1012
+++RPY+DP C + + Y+Y LVG+VEH GTMRGGHYVAYVRGG +N K KE+ G
Sbjct: 963 TMDIRPYIDPRCINEEKYEYHLVGLVEHSGTMRGGHYVAYVRGGQRNSGKGGDKENEGST 1022
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
WY ASD YVREVSL+EVLRCEAYILFYEKI
Sbjct: 1023 WYQASDAYVREVSLDEVLRCEAYILFYEKI 1052
>gi|449433181|ref|XP_004134376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Cucumis
sativus]
Length = 980
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/1060 (47%), Positives = 674/1060 (63%), Gaps = 102/1060 (9%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKP-VESTDDGVPVMKERKPCPHLDKGIDS 59
MGK+ ++K+ A K+K+ ++ +P+ V Q S VE+ D+ + ++KE+ C HLDK +
Sbjct: 1 MGKKVKKKTNRAPPKEKRVSSSSPRKVPQPSNTTVETADEEISIVKEKSQCGHLDKCFNL 60
Query: 60 DKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVD----SKAIWVCLGCGH 115
+++S K+GS++PI CEDC++ DRRG +GK +HGKKKG + VD +KAIW+CL CGH
Sbjct: 61 NELSSKLGSAEPISCEDCQDSSADRRGGRGKARHGKKKGGTSVDVKTDAKAIWICLQCGH 120
Query: 116 YACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDA 175
YACGG+GLPT QSH VRH RQTRHP+VIQ+ENP LRWCF CNTL+PVEKTEENGE KD+
Sbjct: 121 YACGGIGLPTNSQSHAVRHVRQTRHPVVIQFENPQLRWCFSCNTLLPVEKTEENGEQKDS 180
Query: 176 LSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANL 235
LS VVKLI+ RS E + VDVE+ + S V + K ES+V+S DLD Y+V+GL NL
Sbjct: 181 LSNVVKLIRDRSMESTHVDVENTRYTSSEVTAATKPESSVLS--DLDRRNQYIVKGLINL 238
Query: 236 GNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFF 295
GNTCFFNS++QNLLA+ L+D+F+ E GPLTIALKK+F E + E+ +++ INPRS F
Sbjct: 239 GNTCFFNSILQNLLAIDMLRDHFVKLEECVGPLTIALKKIFIEARTESRMKSSINPRSVF 298
Query: 296 GCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYV 355
GCI SKAPQFKGY+QHDSHELLR LLD L SEEL RK + E IS N P FVD +
Sbjct: 299 GCISSKAPQFKGYEQHDSHELLRVLLDALSSEELTSRKMTNSKEER-ISGNPTPTFVDEM 357
Query: 356 FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRI 415
FGGQI+S V C ECGH+STVYEPFLDLSLPVP KK +KK QP SRAKKTK+PPK++G+
Sbjct: 358 FGGQISSAVCCKECGHTSTVYEPFLDLSLPVPMKKPLAKKVQPVSRAKKTKVPPKRNGKT 417
Query: 416 RAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQ 475
K K + V Q S S S++S +E++A + ++ + SQ + A +
Sbjct: 418 IPKTNKVSDIVPIQIASVPSSSNESSLPSEASASSTTTIMEKTSTSQNVSD------AKE 471
Query: 476 CGSALQNVPADPLPQHDQVIDIPVEQ--TVASLDDFWLDYIEPQTTGDVLDSTWQKSDVS 533
G +I VE AS + W+D++EP+ D D+S
Sbjct: 472 SGK-----------------EISVENGGECASDNLTWMDFLEPELNAD-------NCDIS 507
Query: 534 VIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDDSLINSNQIPLLDS 593
QDS ENN +F+ D+ +Q VS S+ + L S
Sbjct: 508 TTQDS----------------------ENNIEVFISDNSQQS-VSGLSM----PVSSLHS 540
Query: 594 KPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQEE 653
+PN + D SS ++ DE PL VQ SEV+LLPY EE S+TAE + +ASSS++GC QE+
Sbjct: 541 EPNQRPDFSSVNSWNDEAPLQVQASEVLLLPYKEE-SSTAEVAKEDDQASSSILGCAQED 599
Query: 654 VDFDGFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCL 713
D G GD+F+EPE IGP+ RPS+ E S F +S+SDP+EVD++D+PVSVESCL
Sbjct: 600 FDGFGLGDMFDEPEIPIGPIGRPSTSNEVAESSF----NSESDPEEVDNTDAPVSVESCL 655
Query: 714 VHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQNDIQGSSL 773
F KPELL+++N ++CE CSK LQ+Q+LE +K+++K+A K + NG +T+ DI
Sbjct: 656 TFFTKPELLSNENGYNCEKCSKRLQQQRLE-MKKQSKVACKAVANGCQTAVGGDI----- 709
Query: 774 TDVDSLCNGDAK-----------TNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDV 822
S CN D+ TN ++ + DC +QDC++ + +
Sbjct: 710 ----SSCNEDSSVEVKNKRNMNLTNGSISYSSGESSNLKKNVDCSSQDCSKPVNCQKSKT 765
Query: 823 NPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVY 882
+P V ++ K+ D SRSS ++ +QE+ D+ SCS+ + + E +
Sbjct: 766 DPPVLDEDEAKVD-KDMNPGLSRSSGCNNTRNQEN--SDDKSSCSLPNDEPAKTNIEHL- 821
Query: 883 QSDSQLVAGNCESEESKVEEI--NSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARG 940
S L GN +SE+S+ E+ +S IV VKRDATKR LI+KAPPILTIH+KRFS DARG
Sbjct: 822 --SSHLAVGN-QSEKSEDGEMDSDSTIVNVKRDATKRFLIHKAPPILTIHMKRFSPDARG 878
Query: 941 RLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKN 1000
R SKLNGHV F E I+L+PY+D C D D YRLVGVVEH G+MRGGHYVAYVRGG +
Sbjct: 879 RYSKLNGHVRFKETIDLKPYLDTRCADRDKCSYRLVGVVEHSGSMRGGHYVAYVRGGNRK 938
Query: 1001 KVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYE 1040
+ + E VWY+ASD V EV+L+ VL CEAYILFYE
Sbjct: 939 RSSGEAEEDASVWYYASDAVVDEVTLDRVLGCEAYILFYE 978
>gi|357462669|ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355490664|gb|AES71867.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1070
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/1129 (46%), Positives = 659/1129 (58%), Gaps = 148/1129 (13%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKP--VESTDDGVPVMKERKPCPHLDKGID 58
M K+ +++ R++ ++ +PK V + P ES + V V KE PCPHL KGI
Sbjct: 1 MAKKIKKRGRSSVKEKAVIIDSSPKIVTESCNPPTTESVGEEVSVAKETNPCPHLVKGIQ 60
Query: 59 SDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKK--GSSLVDSKAIWVCLGCGHY 116
D +S K+ SS PIRCE CREG DRRG KGKGKHGKKK S DSK+IWVCL CG Y
Sbjct: 61 LDILSGKVESSAPIRCEGCREGAADRRGGKGKGKHGKKKGGADSKSDSKSIWVCLECGQY 120
Query: 117 ACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDAL 176
CGGVGLP TP H + H+++ RHPLV+ E P L WCF CN LI V+K E + E +
Sbjct: 121 NCGGVGLPITPNCHAIVHSKKARHPLVVNIEKPQLCWCFRCNMLIQVDKLETD-EASHVI 179
Query: 177 SEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLG 236
S+VVKL+KGRS+ + VDVED G G+V SEIK S SGS G YVVRG+ NLG
Sbjct: 180 SDVVKLLKGRSSGKTLVDVEDVSIGDGSVTSEIKLGSLSTSGSY--GQGGYVVRGMVNLG 237
Query: 237 NTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFG 296
NTCFFNS+MQNLLAM++L+D FL + GPL +LKKLF ET PE+G +N+INPRSFFG
Sbjct: 238 NTCFFNSIMQNLLAMNKLRDNFLRVDAFVGPLISSLKKLFTETNPESGFKNIINPRSFFG 297
Query: 297 CICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
C+CSK+PQF+GYQQHDSHELLRCLLDGL +EELA RK+N + +G SS VD +F
Sbjct: 298 CVCSKSPQFRGYQQHDSHELLRCLLDGLSTEELAGRKQNGSLKRDGTSSK---TLVDALF 354
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIR 416
GGQI+STV C ECGHSSTVYEPFLDLSLPVPTKK P +K QPA R +KTK PPKK + R
Sbjct: 355 GGQISSTVCCNECGHSSTVYEPFLDLSLPVPTKKPPPRKAQPAPRTRKTKPPPKKGAKSR 414
Query: 417 AKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQC 476
K +D + Q +I S+S L +S + +V SSG S +L GS ++++
Sbjct: 415 VKVNRDVDPLPVQ-----NIPSQSSCLDQSVTSGAGELVISSGVSTVL---GSEEISSE- 465
Query: 477 GSALQNVPADPLPQH--------------DQVIDIPVEQTVAS------------LDDFW 510
A N DPLP DQ + + VAS +
Sbjct: 466 --AKVNRDDDPLPTQNVPSQSSSHESSCPDQSVTSVAGELVASSGVSTVLGSEEISSEAN 523
Query: 511 LDYIEPQTTGDVLDSTWQKSDVSVIQDSTD----FAWLDYI------------------- 547
+ + P V++S + SV ++D FAWLD++
Sbjct: 524 KEDLSPSNLVTVVESQQIQGFDSVATKTSDSSDAFAWLDFVEAETNEEDLSPPNLVTVGE 583
Query: 548 ---------------------------EPETISDEHGLTLENNDVLFVQDSGEQDEV--- 577
E ET DE+ + D L VQDS +DE
Sbjct: 584 SQQMQGLDSVANKTSDSSDDFPWLDYVEAETTIDEYASISQKEDALEVQDSENKDERLTA 643
Query: 578 --SDDSLINSNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEK 635
S S + L N + D SS + EDE+PL VQ+SEV+LLPY EE S+ +
Sbjct: 644 FPEQGSCETSGPVCFLKEDQNQRPDFSSSNEREDEVPLQVQNSEVLLLPYKEESSSAGDI 703
Query: 636 ISGEGEASSSVVGCRQEEVDFDGFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDS 695
+G SSSV+G EE +FD FG LFNEPE GP PRPSS + V +G ++ N S+S
Sbjct: 704 TGIDGGDSSSVLGGGPEESEFDAFGGLFNEPEVVAGPAPRPSSSGD-VEAGIIIRNISES 762
Query: 696 DPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKP 755
DPDEVDD+DSPVSVESCL HFIKPELL+D+NAW CE+CSK LQRQK +A ++ L+
Sbjct: 763 DPDEVDDTDSPVSVESCLAHFIKPELLSDENAWHCENCSKILQRQKKKAKEQEKTLSD-- 820
Query: 756 LINGGETSNQND--IQGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAE 813
G S +D S G+ ND N ES VS Q E
Sbjct: 821 ----GNASGSHDESWHASKACSFKVSSTGNEDIENDKNI--ESSVSHV-------QHGTE 867
Query: 814 VESGLTNDVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATS 873
+E+G +++ E+QS S L ++ES + +VD + +
Sbjct: 868 LENGQKDELR---------------NCELQSSS--LHQPNNEESCDNS-----AVDSSIT 905
Query: 874 SGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKR 933
V Q L + +SEE +E + ++V RDATKRVLI +APP+LTIHLKR
Sbjct: 906 G-----NVQQDAPMLNNDDNDSEECSGKETGLESIRVNRDATKRVLIYRAPPVLTIHLKR 960
Query: 934 FSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAY 993
FSQDARGRLSKLNGHVNF E ++LRPYMDP C + + Y Y+LVGVVEH GTMRGGHYVAY
Sbjct: 961 FSQDARGRLSKLNGHVNFRETMDLRPYMDPRCINEEEYKYQLVGVVEHSGTMRGGHYVAY 1020
Query: 994 VRGGPKNKVKA-KKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
VRGG +N+ K KE+ WYHASD YVR+VSL+EVLRCEAYILFYE+
Sbjct: 1021 VRGGQRNREKVDNKENESSTWYHASDAYVRQVSLDEVLRCEAYILFYER 1069
>gi|224060379|ref|XP_002300170.1| predicted protein [Populus trichocarpa]
gi|222847428|gb|EEE84975.1| predicted protein [Populus trichocarpa]
Length = 925
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/771 (55%), Positives = 524/771 (67%), Gaps = 40/771 (5%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKPVESTDDGVPVMKERKPCPHLDKGIDSD 60
MGKRA +K K+K+ A +PKSV QQ+ DGV V+KERK CPH DKG D++
Sbjct: 1 MGKRANKKKTRPLQKEKRVAGHSPKSVPQQTNLNVEDVDGVTVVKERKLCPHFDKGFDAN 60
Query: 61 KISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSK----AIWVCLGCGHY 116
K+S KI SSD RCEDCRE VGDR+G KGKGK KKKGS VDSK AIWVCL CGH
Sbjct: 61 KLSEKISSSDSFRCEDCREAVGDRKGAKGKGKQVKKKGSGSVDSKSESKAIWVCLECGHL 120
Query: 117 ACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDAL 176
ACGG+GLPTT QSH VRH++Q RHPLV QWENP LRWCFPCNTLIP EKT ENGE KDA+
Sbjct: 121 ACGGIGLPTTSQSHAVRHSKQNRHPLVFQWENPQLRWCFPCNTLIPAEKTGENGEKKDAV 180
Query: 177 SEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLG 236
EVV +IK +S++ SS DVED WFG G++ SE+ +E T+ G L+G + +VVRGL NLG
Sbjct: 181 FEVVNMIKAQSSKESSADVEDVWFGRGSIISELNAEGTMTIG--LEGRSGHVVRGLVNLG 238
Query: 237 NTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFG 296
NTCFFNSVMQNLLAM++L D+F + E +FGPL+ +LKKLF + K ETG RNVINP+SFFG
Sbjct: 239 NTCFFNSVMQNLLAMNKLHDHFSSEEASFGPLSSSLKKLFTDLKAETGFRNVINPKSFFG 298
Query: 297 CICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
+CSKAPQF+GYQQ DSHELL CLLDGL +EEL RKR + SE +GI GP FVD F
Sbjct: 299 SVCSKAPQFRGYQQQDSHELLHCLLDGLSTEELTVRKRRNASEEDGIPPKHGPTFVDSAF 358
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIR 416
GG I+STV CVECGHSSTV+EPFLDLSLPVPTKK P+KK QP S+AKKTKLPPK+ G+++
Sbjct: 359 GGLISSTVCCVECGHSSTVHEPFLDLSLPVPTKKPPTKKVQPVSQAKKTKLPPKRGGKVQ 418
Query: 417 AKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQC 476
K ++T ++ QS+S S+ S S T+S PL+EN V+SS S T +
Sbjct: 419 PKINRNTDSMPAQSVSKPSVQSDSPCQTQSAVPLTENTVASSDNIPAPGSTAPTTAVDER 478
Query: 477 GSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWLDYIEPQTTGDVLDSTWQKSDVSVIQ 536
G QN+ A Q ++ +EQ +S DDFW+
Sbjct: 479 GEVSQNLAAVIESDSKQAVETTMEQIASSFDDFWM------------------------- 513
Query: 537 DSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDDSLINSNQIPLLDSKPN 596
DYI ET S EH ENN + Q G++ + +D L + Q +D +PN
Sbjct: 514 --------DYIGAETTS-EHDFAKENNVLAAGQQCGDKVNIPNDDLTETCQASSIDGEPN 564
Query: 597 LKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQEEVDF 656
K +SSS + E+E+PL V+ SEV+LLPY EE T E + GE EA SS VGC Q+E +F
Sbjct: 565 KKPESSSVNPWEEEVPLQVRSSEVLLLPYKEEGFTDREIMKGESEAGSSFVGCGQDEAEF 624
Query: 657 DGFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHF 716
DG GDLFNEPE + PV PS G E F+ G SS+SDPDEVDDSDSPVS+ESCL F
Sbjct: 625 DGIGDLFNEPEVSAAPVAGPSLGNEVALPSFIAGISSESDPDEVDDSDSPVSLESCLALF 684
Query: 717 IKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQND 767
IKPELL++DNAW+CE+CS L+ Q+L+A +++K++ K ING ET Q+D
Sbjct: 685 IKPELLSNDNAWECENCSNILREQRLDAKNKQSKISPKASINGDETQIQSD 735
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/178 (66%), Positives = 143/178 (80%), Gaps = 1/178 (0%)
Query: 865 SCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAP 924
SCSVD +S+GY+ K Q+D GNCES+ ++ + K + VKRDATKRVLI+KAP
Sbjct: 747 SCSVDETSSTGYTMAKDEQTDCNF-PGNCESDVNEDGDKTLKKLNVKRDATKRVLIDKAP 805
Query: 925 PILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGT 984
PILT+HLKRFSQDARGRLSKLNGHVNF ++++LRPYMDP C D +Y YRL+GVVEH GT
Sbjct: 806 PILTVHLKRFSQDARGRLSKLNGHVNFRDVLDLRPYMDPRCVDTQSYVYRLLGVVEHSGT 865
Query: 985 MRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
MRGGHY+AYVRG + K +A KE G VWY+ASD +V+EVSLEEVLRC+AY+LFYEKI
Sbjct: 866 MRGGHYIAYVRGDARGKGRADKEQGGSVWYYASDAHVQEVSLEEVLRCDAYLLFYEKI 923
>gi|449487624|ref|XP_004157719.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
2-like [Cucumis sativus]
Length = 1225
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/1056 (44%), Positives = 649/1056 (61%), Gaps = 113/1056 (10%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKP-VESTDDGVPVMKERKPCPHLDKGIDS 59
MGK+ ++K+ A K+K+ ++ +P+ V Q S VE+ D+ + ++KE+ C HLDK +
Sbjct: 1 MGKKVKKKTNRAPPKEKRVSSSSPRKVPQPSNTTVETADEEISIVKEKSQCGHLDKCFNL 60
Query: 60 DKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVD----SKAIWVCLGCGH 115
+++S K+GS++PI CEDC++ DRRG +GK +HGKKKG + VD +KAIW+CL CGH
Sbjct: 61 NELSSKLGSAEPISCEDCQDSSADRRGGRGKARHGKKKGGTSVDVKTDAKAIWICLQCGH 120
Query: 116 YACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDA 175
YACGG+GLPT QSH VRH RQTRHP+VIQ+ENP LRWCF CNTL+PVEKTEENGE KD+
Sbjct: 121 YACGGIGLPTNSQSHAVRHVRQTRHPVVIQFENPQLRWCFSCNTLLPVEKTEENGEQKDS 180
Query: 176 LSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANL 235
LS VVKLI+ RS E + VDVE+ + S V + K ES+V+S DLD Y+V+GL NL
Sbjct: 181 LSNVVKLIRDRSMESTHVDVENTRYTSSEVTAATKPESSVLS--DLDRRNQYIVKGLINL 238
Query: 236 GNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFF 295
GNTC FNS++QNLLA+ L+D+F+ E GPLTIALKK+F E + E+ +++ INPRS F
Sbjct: 239 GNTCXFNSILQNLLAIDMLRDHFVKLEECVGPLTIALKKIFIEARTESRMKSSINPRSVF 298
Query: 296 GCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYV 355
GCI SKAPQFKGY+QHDSHELLR LLD L SEEL RK + E IS N P FVD +
Sbjct: 299 GCISSKAPQFKGYEQHDSHELLRVLLDALSSEELTSRKMTNSKEER-ISGNPTPTFVDEM 357
Query: 356 FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRI 415
FGGQI+S V C ECGH+STVYEPFLDLSLPVP KK +KK QP SRAKKTK+PPK++G+
Sbjct: 358 FGGQISSAVCCKECGHTSTVYEPFLDLSLPVPMKKPLAKKVQPVSRAKKTKVPPKRNGKT 417
Query: 416 RAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQ 475
K K + V Q S S S++S +E++A + ++ + SQ + A +
Sbjct: 418 IPKTNKVSDIVPIQIASVPSSSNESSLPSEASASSTTTIMEKTSTSQNVSD------AKE 471
Query: 476 CGSALQNVPADPLPQHDQVIDIPVEQ--TVASLDDFWLDYIEPQTTGDVLDSTWQKSDVS 533
G +I VE AS + W+D++EP+ D D+S
Sbjct: 472 SGK-----------------EISVENGGECASDNLTWMDFLEPELNAD-------NCDIS 507
Query: 534 VIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDDSLINSNQIPLLDS 593
QDS ENN +F+ D+ +Q VS S+ S+ L S
Sbjct: 508 TTQDS----------------------ENNIEVFISDNSQQS-VSGLSMPVSS----LHS 540
Query: 594 KPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQEE 653
+PN + D SS ++ DE PL VQ SEV+LLPY EE S+TAE + +ASSS++GC QE+
Sbjct: 541 EPNQRPDFSSVNSWNDEAPLQVQASEVLLLPYKEE-SSTAEVAKEDDQASSSILGCAQED 599
Query: 654 VDFDGFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCL 713
D G GD+F+EPE IGP+ RPS+ E S F +S+SDP+EVD++D+PVSVESCL
Sbjct: 600 FDGFGLGDMFDEPEIPIGPIGRPSTSNEVAESSF----NSESDPEEVDNTDAPVSVESCL 655
Query: 714 VHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQNDIQGSSL 773
F KPELL+++N ++CE CSK LQ+Q+LE +K+++K+A K + NG +T+ DI
Sbjct: 656 TFFTKPELLSNENGYNCEKCSKRLQQQRLE-MKKQSKVACKAVANGCQTAVGGDI----- 709
Query: 774 TDVDSLCNGDAK-----------TNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDV 822
S CN D+ TN ++ + DC +QDC++ + +
Sbjct: 710 ----SSCNEDSSVEVKNKRNMNLTNGSISYSSGESSNLKKNVDCSSQDCSKPVNCQKSKT 765
Query: 823 NPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVY 882
+P V ++ K+ D SRSS ++ +QE+ D+ SCS+ + + E +
Sbjct: 766 DPPVLDEDEAKVD-KDMNPGLSRSSGCNNTRNQEN--SDDKSSCSLPNDEPAKTNIEHL- 821
Query: 883 QSDSQLVAGNCESEESKVEEI--NSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARG 940
S L GN +SE+S+ E+ +S IV VKRDATKR LI+KAPPILTIH+KRFS DARG
Sbjct: 822 --SSHLAVGN-QSEKSEDGEMDSDSTIVNVKRDATKRFLIHKAPPILTIHMKRFSPDARG 878
Query: 941 RLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEH-----LGTMRGGHYVAYVR 995
R SKLNGHV F E I+L+PY+D + + L + L + G ++ +V
Sbjct: 879 RYSKLNGHVRFKETIDLKPYLDTSISQMCKFYTFLWNEMASSKQKILEELHSGPFI-FVP 937
Query: 996 GGPKNKVKAKKESVGGVWYHASDVYVRE--VSLEEV 1029
P ++ ++ V G++ +VY + VS++E+
Sbjct: 938 IVPNSR---HEDVVSGIFLSPKEVYWHDPIVSIDEI 970
>gi|359477947|ref|XP_002265806.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 1-like [Vitis
vinifera]
Length = 950
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/894 (49%), Positives = 565/894 (63%), Gaps = 81/894 (9%)
Query: 187 STEISSVDVEDAWFGSGNV--------NSEIKSESTVVSGSDLDGNACYVVRGLANLGNT 238
S + + V + D W+G G+V N EI ++T+ DLD YVVRGL N+GNT
Sbjct: 100 SVDSNRVKLLDVWYGGGSVKNEKTPDNNLEIIPDNTL--SGDLDERDSYVVRGLINIGNT 157
Query: 239 CFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCI 298
CFFNS+MQNLLAM+ L+DYFL + + GPLT A +K+F ET TGLRNVINP+S FGC+
Sbjct: 158 CFFNSIMQNLLAMNNLRDYFLKLDGSIGPLTSAFRKVFDETSSGTGLRNVINPKSVFGCV 217
Query: 299 CSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGG 358
C+KAPQF+GYQQ DSHELLRCLLDGLC+EEL RKR + S+ +GIS N+ P FVD +FGG
Sbjct: 218 CAKAPQFRGYQQQDSHELLRCLLDGLCTEELGARKRANSSQEDGISPNEAPTFVDTMFGG 277
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIRAK 418
QI+STV CVECGHSSTVYEPFLDLSLPVPTKK PS+KTQP SR KKTKLPPKK+GR+R+K
Sbjct: 278 QISSTVCCVECGHSSTVYEPFLDLSLPVPTKKPPSRKTQPVSRPKKTKLPPKKAGRVRSK 337
Query: 419 GTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQCGS 478
KD ++ S+ + S S + +S+AP++E +VSSSG S D V VA S
Sbjct: 338 VNKDADSLVALSVQHPSSDGDSSNQIQSSAPVAEKLVSSSGDSAGSDLVSPCAVADVKDS 397
Query: 479 ALQNVPADPLPQHDQVIDIPVEQTVASLDDF----------WLDYIEPQTTGDVLDSTWQ 528
+N+ ++ QV + E A DDF WLDY++P DV + Q
Sbjct: 398 VSKNISTSEEFENKQVFENVTETKAAPSDDFTLLDCSDTFTWLDYLDPGAVLDVHNVASQ 457
Query: 529 KSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDDSLIN---- 584
DVSVI QDSG QD V +D L+
Sbjct: 458 NKDVSVI---------------------------------QDSGNQDNVQNDVLLQNASE 484
Query: 585 -SNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEAS 643
S+Q+ +PNLK DS S ++ E+ELP+ +Q SEV+LLPY EE ST E +G+
Sbjct: 485 FSSQVYPHKGEPNLKIDSCSANSWEEELPVQIQSSEVLLLPYKEETSTAVEITTGQ-VGP 543
Query: 644 SSVVGCRQEEVDFDGFGDLFNEPETAIGPVPRPSSG------TESVGSGFVVGNSSDSDP 697
S V G +E +DFDGFG LF+EPE A G +P G E VG+GF+ NSS+SDP
Sbjct: 544 SVVSGSNEELLDFDGFGGLFDEPEAASGVNLQPLLGDNSFNANEVVGTGFINRNSSESDP 603
Query: 698 DEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLI 757
DEVD+S+S VS++SCL +F KPELL++++AW CE+CSK L Q+++ SK +
Sbjct: 604 DEVDNSNSMVSIDSCLTYFTKPELLSNEHAWHCENCSKILWDQRIKTRTNLPNTISKIQM 663
Query: 758 NGGETSNQN-------DIQGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGKT-DCFNQ 809
NG E QN DI + D+D + ND + L + D Q
Sbjct: 664 NGSEGKIQNGPFGLCKDISPDEVKDID-----NENVKNDGHNILGGLAPHDRISDDDSKQ 718
Query: 810 DCAEVESGLTNDVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVD 869
+ ++++ T +VNP V Q E GK K+N A+ S SS +CSQ S++D SCSV
Sbjct: 719 NGLKLQTSQTVEVNPVVSQCEGGKSKMNYALPELSHSSDTYKTCSQASLSDPASDSCSVH 778
Query: 870 GATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTI 929
S G + K Q +SQ++ G ESEE + +E++S+ VKVKRDATKR+LINKAPPILTI
Sbjct: 779 EPNSVGCNTGK--QRNSQMLTGELESEEDEDKEMDSESVKVKRDATKRILINKAPPILTI 836
Query: 930 HLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGH 989
HLKRFSQDARGR +KLNGHV F + I+LRP+M+P C + Y+YRLVGVVEH G+MR GH
Sbjct: 837 HLKRFSQDARGRYNKLNGHVVFKDSIDLRPFMEPRCVEKGKYEYRLVGVVEHSGSMRMGH 896
Query: 990 YVAYVRGGPKNKV-KAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
YVAYVRGG + +AKKES GVWY+ASD VRE SL+EVLRCEAYILFYEKI
Sbjct: 897 YVAYVRGGERRSSGQAKKESGRGVWYYASDASVRETSLDEVLRCEAYILFYEKI 950
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKPV-ESTDDGVPVMKERKPCPHLDKGIDS 59
MGK+ ++K R K+K+ +A + K V QQ P E+ DG V+K R+PC H +KG+D
Sbjct: 1 MGKKVKKKGRTGH-KEKRGSASSLKIVPQQCNPSSETVADGNTVVKGREPCIHFNKGVDL 59
Query: 60 DKISVKIGSSDPIRCEDCREGVGDRRGKKG 89
KIS K G +PIRCEDCREG DRRG +
Sbjct: 60 GKISAKFGLPEPIRCEDCREGTIDRRGNRA 89
>gi|297848732|ref|XP_002892247.1| ubiquitin-specific protease 2 [Arabidopsis lyrata subsp. lyrata]
gi|297338089|gb|EFH68506.1| ubiquitin-specific protease 2 [Arabidopsis lyrata subsp. lyrata]
Length = 927
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 358/769 (46%), Positives = 468/769 (60%), Gaps = 68/769 (8%)
Query: 41 VPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSS 100
V +KE + C H DKG++ +K+ KI SS I+CE+C+EG+ +RG K KG GKK SS
Sbjct: 41 VKPVKETQACVHFDKGLNLEKVLDKIKSSRQIKCEECKEGLSGKRGTKAKGNKGKKDFSS 100
Query: 101 LVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTL 160
D KAIW+CL CG Y CGGVGLP QSHV+RH R TRH LVIQWENP LRWCFPC +L
Sbjct: 101 -SDKKAIWLCLECGCYVCGGVGLPNGAQSHVLRHTRVTRHRLVIQWENPQLRWCFPCRSL 159
Query: 161 IPVEKTEENGENKDALSEVVKLIKGRS-TEISSVDVEDAWFGSGNVNSEIKSESTVVSGS 219
+PV K E+NGE KD LSEVVKLIKGRS ++S D+ED SG++ S+IK E V+ S
Sbjct: 160 LPVVK-EDNGEKKDVLSEVVKLIKGRSLNNLASSDIEDQCSVSGSITSDIKLEGAAVT-S 217
Query: 220 DLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL--NAELTFGPLTIALKKLFA 277
D++ YVVRGL NLGNTCFFNS+MQNLL++ +L+D+FL N PL +L+KLFA
Sbjct: 218 DIEAREGYVVRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLKENGSGAGRPLASSLRKLFA 277
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
ETKPE GL++VINPR FFG CSKAPQF+GY QHDSHELLRCLLD L +EE A RK+
Sbjct: 278 ETKPEAGLKSVINPRVFFGSFCSKAPQFRGYDQHDSHELLRCLLDALSTEESALRKK--- 334
Query: 338 SEGNGISSN--QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
GIS N + +D VFGG+ +S VRC+ECGHSS VYEPFLDLSLPVP KK+P KK
Sbjct: 335 ---RGISDNDEKSTTLIDSVFGGETSSIVRCMECGHSSKVYEPFLDLSLPVPFKKSPPKK 391
Query: 396 TQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVV 455
QP SRA+K KLPPK+ + +K +K ++ + ++++S L +S ++L V+
Sbjct: 392 LQPVSRARKAKLPPKRVPKNVSKVSKVSNVLPSKALSEL--NSPGKALV---------VI 440
Query: 456 SSSGGSQLLDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWLDYIE 515
+ S D+ S G L+ + L ++ V Q+ D FWLD I
Sbjct: 441 ADS------DTSCSSFAPLDNGPVLETLSV--LTADNKQASESVTQSDTGFDSFWLDIIG 492
Query: 516 PQTTGDVLDSTWQKSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQD 575
P+ +GD ++++ + +D TD + E +LE N +QD+ Q
Sbjct: 493 PENSGD-------ETNLDMQEDGTD---------NVSTTEGDQSLECNTERLMQDN-VQA 535
Query: 576 EVSDDSLINSN------QIPLLDSKPNLKADSSSGDA-GEDELPLVVQDSEVILLPYNEE 628
SD+ + S Q + P + SSS + E+ELPLVV DS+++ +PYNE
Sbjct: 536 MQSDEGPVTSGISAEFIQASCISCDPGIGESSSSVNPWDEEELPLVVGDSQILYMPYNEI 595
Query: 629 ISTTAEKISGEGEASSSVVGCRQE--EVDFDGFGDLFNEPETAIGPVPRPSSGTESVGSG 686
GE EASSS E DF FG LF+EPET GPV P S E+ G G
Sbjct: 596 SCNDKSVAEGEFEASSSFGTGDHEPQNSDFVDFGGLFDEPETTEGPVFGPPSKAEASGVG 655
Query: 687 FVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALK 746
++ SS+SDP+E+DDSDSPVSVE CL HF KPE+L+DDNAW CE+CSK L+ Q+L +
Sbjct: 656 -IMAFSSESDPEEIDDSDSPVSVERCLAHFTKPEILSDDNAWHCENCSKNLKLQRLREKQ 714
Query: 747 RRAKLASKPLINGGETSNQNDIQGSSLTDV--------DSLCNGDAKTN 787
+ K S+ +N+ +G TD+ D+ C D +N
Sbjct: 715 KSKKDESRSSNTSNGWVKENESEGFGETDILAVKQDPNDTCCVKDHSSN 763
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
Query: 865 SCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAP 924
+C V +S+G A + + +D G + +E + K++ VKRDA+KRVLINKAP
Sbjct: 754 TCCVKDHSSNGRKATRSHSADESESKGTQDEDED-----SEKVITVKRDASKRVLINKAP 808
Query: 925 PILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGT 984
P+LTIHLKRFSQD RGRLSKLNGHV F E+I+L YMD + D YRL G+VEH GT
Sbjct: 809 PVLTIHLKRFSQDLRGRLSKLNGHVAFQEVIDLGQYMDTRFSGEDPPVYRLAGLVEHSGT 868
Query: 985 MRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
MRGGHYVAYVRGG + K + +S VWY+ SD +VR+VSLE+VL EAYILFYE+I
Sbjct: 869 MRGGHYVAYVRGGQRVK---ESDSSSTVWYNVSDAHVRQVSLEKVLHSEAYILFYERI 923
>gi|18390446|ref|NP_563719.1| ubiquitin carboxyl-terminal hydrolase 2 [Arabidopsis thaliana]
gi|62901383|sp|Q8W4N3.2|UBP2_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=Deubiquitinating enzyme 2; Short=AtUBP2; AltName:
Full=Ubiquitin thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|7211980|gb|AAF40451.1|AC004809_9 Strong similarity to the putative ubiquitin-specific protease
F24L7.8 from A. thaliana gi|2914695 on BAC gb|AC003974
and to ubiquitin carboxyl-terminal hydrolase family
PF|00442 and PF|00443. ESTs gb|Z17750 and gb|Z17572 come
from this gene [Arabidopsis thaliana]
gi|11993463|gb|AAG42750.1|AF302659_1 ubiquitin-specific protease 2 [Arabidopsis thaliana]
gi|332189631|gb|AEE27752.1| ubiquitin carboxyl-terminal hydrolase 2 [Arabidopsis thaliana]
Length = 961
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 356/750 (47%), Positives = 457/750 (60%), Gaps = 84/750 (11%)
Query: 41 VPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSS 100
V +KE + C H DK ++ +K+ KI SS I+C +C EGV +RG K KG GKK SS
Sbjct: 41 VKAVKETQACVHFDKALNLEKVLDKIKSSRQIKCAECNEGVYGKRGTKAKGSKGKKDFSS 100
Query: 101 ---LVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPC 157
++KAIW+CL CG Y CGGVGLP PQSHV+RH+R TRH LVIQWENP LRWCFPC
Sbjct: 101 SDPKSNNKAIWLCLECGCYVCGGVGLPNGPQSHVLRHSRVTRHRLVIQWENPQLRWCFPC 160
Query: 158 NTLIPVEKTEENGENKDALSEVVKLIKGRS-TEISSVDVEDAWFGSGNVNSEIKSESTVV 216
L+PVEK E+NGE KD LSEVVKLIKGRS ++S D+ED GSG++ S+IK E V
Sbjct: 161 QLLLPVEK-EDNGEKKDVLSEVVKLIKGRSLNNLASSDIEDQCSGSGSITSDIKLEGAVT 219
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL--NAELTFGPLTIALKK 274
SD++ YVVRGL NLGNTCFFNS+MQNLL++ +L+D+FL N GPL +L+K
Sbjct: 220 --SDIEARDGYVVRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLKENGSGVGGPLASSLRK 277
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
LF ETKPE GL++VINPR+FFG CSKAPQF+GY QHDSHELLRCLLD L +EE A RK+
Sbjct: 278 LFTETKPEAGLKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKK 337
Query: 335 NSPSEGNGISSN--QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
G+S N + ++ VFGG+ +S V C+ECGHSS VYEPFLDLSLPVP KK+P
Sbjct: 338 ------RGVSDNDEKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSLPVPFKKSP 391
Query: 393 SKKTQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLT-------E 445
KK QP SRAKK KLPPK+ + +K +K + + +S L+ S KS ++T
Sbjct: 392 PKKPQPVSRAKKAKLPPKRVPKNVSKVSKVSKVLPGMVLSELNSSGKSMAVTADSDTSCS 451
Query: 446 STAPLSENVVSSSGGSQLLDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVAS 505
S APL V + +P+V T L N A Q+
Sbjct: 452 SLAPLDNGPV-----------LETPSVLT-----LDNNQASE----------SASQSDTG 485
Query: 506 LDDFWLDYIEPQTTGDVLDSTWQKSDVSVIQDSTDFAWLDYI--EPETISDEH----GLT 559
D WLD+I P+T+GD + Q+ + D+ A ++ I P +++ T
Sbjct: 486 FDGSWLDFIGPETSGDETNLDMQEDGI----DNVITAEVNQIVPSPNIVANSSVSSGDQT 541
Query: 560 LENNDVLFVQDSGE-----------------QDEVSDDSLINS--NQIPLLDSKPNLKAD 600
LE N +QD E DE S I++ +Q + P +
Sbjct: 542 LEGNTERLMQDYEEIAKAEANLDEKDVQAMQSDECPATSGISAEFSQASCIGCDPGIGES 601
Query: 601 SSSGDA-GEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQE--EVDFD 657
SSS + E+ELPLVV DS+++ +PY +EIS + + GE EASSS V E DF
Sbjct: 602 SSSVNPWDEEELPLVVADSQILYMPY-KEISCNDKSVEGECEASSSFVTGDHEPQNSDFV 660
Query: 658 GFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFI 717
FG LF+EPET GPV P S E+ G GF + SS+SDP+E+DDSD PVSVE CL HF
Sbjct: 661 DFGGLFDEPETTEGPVFGPPSKAEASGVGF-MAFSSESDPEEIDDSDLPVSVERCLGHFT 719
Query: 718 KPELLTDDNAWDCESCSKTLQRQKLEALKR 747
K E+L+DDNAW+CE+CSK L+ Q+L ++
Sbjct: 720 KHEILSDDNAWNCENCSKNLKLQRLREKRK 749
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 129/183 (70%), Gaps = 9/183 (4%)
Query: 860 DQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVL 919
D ++ SC V +S G A +++ +D G + +E + K++ VKRDATK+VL
Sbjct: 784 DPNDTSC-VKDHSSDGRKAARIHSADESESKGTQDEDED-----SEKVITVKRDATKKVL 837
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVV 979
INKAPP+LTIHLKRFSQD RGRLSKLNGHV F E+I+LR YMD C+ D YRL G+V
Sbjct: 838 INKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLV 897
Query: 980 EHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
EH GTMRGGHYVAYVRGG + K + +S WY+ SD YVR+VSLE+VL EAYILFY
Sbjct: 898 EHSGTMRGGHYVAYVRGGQRVK---ETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFY 954
Query: 1040 EKI 1042
E+I
Sbjct: 955 ERI 957
>gi|17064774|gb|AAL32541.1| Unknown protein [Arabidopsis thaliana]
Length = 961
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 355/750 (47%), Positives = 458/750 (61%), Gaps = 84/750 (11%)
Query: 41 VPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSS 100
V +KE + C H DK ++ +K+ KI SS I+C +C EGV +RG K KG GKK SS
Sbjct: 41 VKAVKETQACVHFDKALNLEKVLDKIKSSRQIKCAECNEGVYGKRGTKAKGSKGKKDFSS 100
Query: 101 ---LVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPC 157
++KAIW+CL CG Y CGGVGLP PQSHV+RH+R TRH LVIQWENP LRWCFPC
Sbjct: 101 SDPKSNNKAIWLCLECGCYVCGGVGLPNGPQSHVLRHSRVTRHRLVIQWENPQLRWCFPC 160
Query: 158 NTLIPVEKTEENGENKDALSEVVKLIKGRS-TEISSVDVEDAWFGSGNVNSEIKSESTVV 216
L+PVEK E+NGE KD LSEVVKLIKGRS ++S D+ED GSG++ S+IK E V
Sbjct: 161 QLLLPVEK-EDNGEKKDVLSEVVKLIKGRSLNNLASSDIEDQCSGSGSITSDIKLEGAVT 219
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL--NAELTFGPLTIALKK 274
SD++ YVVRGL NLGNTCFFNS+MQNLL++ +L+D+FL N GPL +L+K
Sbjct: 220 --SDIEARDGYVVRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLEENGSGVGGPLASSLRK 277
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
LF ETKPE GL++VINPR+FFG CSKAPQF+GY QHDSHELLRCLLD L +EE A RK+
Sbjct: 278 LFTETKPEAGLKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKK 337
Query: 335 NSPSEGNGISSN--QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
G+S N + ++ VFGG+ +S V C+ECGHSS VYEPFLDLSLPVP KK+P
Sbjct: 338 ------RGVSDNDEKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSLPVPFKKSP 391
Query: 393 SKKTQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLT-------E 445
KK QP SRAKK KLPPK+ + +K +K + + +S L+ S KS ++T
Sbjct: 392 PKKPQPVSRAKKAKLPPKRVPKNVSKVSKVSKVLPGMVLSELNSSGKSMAVTADSDTSCS 451
Query: 446 STAPLSENVVSSSGGSQLLDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVAS 505
S APL V + +P+V T L N A Q+
Sbjct: 452 SLAPLDNGPV-----------LETPSVLT-----LDNNQASE----------SASQSDTG 485
Query: 506 LDDFWLDYIEPQTTGDVLDSTWQKSDVSVIQDSTDFAWLDYI--EPETISDEH----GLT 559
D WLD+I P+T+GD + Q+ + D+ A ++ I P +++ T
Sbjct: 486 FDGSWLDFIGPETSGDETNLDMQEDGI----DNVITAEVNQIVPSPNIVANSSVSSGDQT 541
Query: 560 LENNDVLFVQDSGE-----------------QDEVSDDSLINS--NQIPLLDSKPNLKAD 600
LE N +QD E DE S I++ +Q + P +
Sbjct: 542 LEGNTERLMQDYEEIAKAEANLDEKDVQAMQSDECPATSGISAEFSQASCIGCDPGIGES 601
Query: 601 SSSGDA-GEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGC--RQEEVDFD 657
SSS + E+ELPLVV DS+++ +PY +EIS + + GE EASSS V + + DF
Sbjct: 602 SSSVNPWDEEELPLVVADSQILYMPY-KEISCNDKSVEGECEASSSFVTGDHKPQNSDFV 660
Query: 658 GFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFI 717
FG LF+EPET GPV P S E+ G GF + SS+SDP+E+DDSD PVSVE CL HF
Sbjct: 661 DFGGLFDEPETTEGPVFGPPSKAEASGVGF-MAFSSESDPEEIDDSDLPVSVERCLGHFT 719
Query: 718 KPELLTDDNAWDCESCSKTLQRQKLEALKR 747
K E+L+DDNAW+CE+CSK L+ Q+L ++
Sbjct: 720 KHEILSDDNAWNCENCSKNLKLQRLREKRK 749
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 129/183 (70%), Gaps = 9/183 (4%)
Query: 860 DQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVL 919
D ++ SC V +S G A +++ +D G + +E + K++ VKRDATK+VL
Sbjct: 784 DPNDTSC-VKDHSSDGRKAARIHSADESESKGTQDEDED-----SEKVITVKRDATKKVL 837
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVV 979
INKAPP+LTIHLKRFSQD RGRLSKLNGHV F E+I+LR YMD C+ D YRL G+V
Sbjct: 838 INKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLV 897
Query: 980 EHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
EH GTMRGGHYVAYVRGG + K + +S WY+ SD YVR+VSLE+VL EAYILFY
Sbjct: 898 EHSGTMRGGHYVAYVRGGQRVK---ETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFY 954
Query: 1040 EKI 1042
E+I
Sbjct: 955 ERI 957
>gi|297826715|ref|XP_002881240.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327079|gb|EFH57499.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1098
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 288/725 (39%), Positives = 374/725 (51%), Gaps = 125/725 (17%)
Query: 25 KSVLQQSKPVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDR 84
K V +QS+ + V + E++ C H DK +D DK+ KI SS I+C +C+EGV +
Sbjct: 22 KKVTKQSEHSVEVTEEVVTVPEKRSCVHFDKFVDLDKLLKKIKSSQQIKCGECKEGVHVK 81
Query: 85 RGKKGKGKHGKKKGSS---LVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHP 141
RG K G SS KAIWVCL CG+Y CG VGLPT QSHV+RH R TRH
Sbjct: 82 RGSKASISSGIYWFSSSDQKCAKKAIWVCLECGYYVCGDVGLPTGAQSHVMRHFRLTRHR 141
Query: 142 LVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRS--TEISSVDVEDAW 199
LVIQ ENP LRWCF C +L+P EK EENGE KD L EVVKLI+ RS T +S + E +
Sbjct: 142 LVIQCENPQLRWCFSCQSLVPFEK-EENGEKKDLLLEVVKLIRERSPNTFSASFETEYSC 200
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
GSGN+ + G ++ Y VRGL NLGNTCFFNSVMQ+LL++ QL+++FL
Sbjct: 201 SGSGNITG-----GSFTGG--IEARDGYAVRGLVNLGNTCFFNSVMQSLLSLDQLREHFL 253
Query: 260 NAELTF-GPLTIALKKLFAETKPETGL-RNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
+L+ GPL +LKKLFAE+K E G R+ INPR+ F +CS+APQF+GYQQHDSHELL
Sbjct: 254 KDDLSVSGPLVSSLKKLFAESKSEAGFFRSAINPRALFVSVCSQAPQFRGYQQHDSHELL 313
Query: 318 RCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYE 377
RCLLDGL EE + RK+ + N S+ Q P +D VFGG+I+STV C+ CGH S VYE
Sbjct: 314 RCLLDGLSIEESSLRKKLGVFDSNDSSTYQKPTLIDSVFGGEISSTVSCLACGHFSKVYE 373
Query: 378 PFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSIS 437
PFLDLSLP+P+KK P KK + S AK+ K+G + KD+ + + S+ + +
Sbjct: 374 PFLDLSLPIPSKKLPPKKQRIVSLAKEV----LKNGAV----GKDSEVGSAKPASDHNFT 425
Query: 438 SKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQCGSALQNVPADPLPQHDQVIDI 497
VS+ L+D QV DI
Sbjct: 426 -----------------VSNPSAMALIDK--------------------------QVSDI 442
Query: 498 PVEQTVAS--LDDFWLDYIEPQTTGDVLDSTWQKSDVSVIQDSTDFAWLD---YIEPETI 552
E LD FW D D ST K + ST+ D +PET+
Sbjct: 443 TTESDTEQYELDKFWSDLDLLGDVSDTAPSTKAKGVNQTLVGSTETLMHDNDVTAKPETV 502
Query: 553 SD--EHGLTLENNDVLFVQDSGEQDEVSDDSLINSNQIPLLDSKPNLKADSSSGDAGEDE 610
D E T N D S DE + S K+ SS+ ++E
Sbjct: 503 PDKEESRATQSNEDTSASGISAVIDEAQ-----------VFRSPDFEKSSSSANQWADEE 551
Query: 611 LPLVVQDSEVILLPYNEEIS----TTAE-------------------------------- 634
LPL+V DS+V+ +PY + +S T AE
Sbjct: 552 LPLMVPDSQVLYMPYKDHLSYDDNTVAEGKDGAFLSYVSGPHEQIEDHFDCNADEPGISS 611
Query: 635 ----KISGEGEASSSVV-GCRQEEVDFDGFGDLFNEPETAIGPVPRPSSGTESVGSGFVV 689
+GEGEASSS V G + ++D+ F F+EPE GPV R S E +GF+
Sbjct: 612 INITDRAGEGEASSSFVSGDHEPKIDYIDFSSFFDEPEIPEGPVFRLLSKAEVSEAGFMA 671
Query: 690 GNSSD 694
+S+D
Sbjct: 672 DSSND 676
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 173/412 (41%), Positives = 227/412 (55%), Gaps = 63/412 (15%)
Query: 637 SGEGEASSSVV-GCRQEEVDFDGFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDS 695
+G+GE SS + G + +D++ LF + ET+ PV P S + V + SSDS
Sbjct: 744 AGKGETFSSFMNGDNERNIDYESINSLFYDRETSERPVFGPPSKAK-VSEACFMAVSSDS 802
Query: 696 DPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKP 755
DP +DDSDSPVSV+ CL F KPE+L++DNAW CE+CSK L KLE L+ + K
Sbjct: 803 DPAVLDDSDSPVSVDRCLAQFTKPEILSEDNAWHCENCSKNL---KLERLREKRK----- 854
Query: 756 LINGGETSNQNDIQGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVE 815
+ L G N + F E + + +Q C + E
Sbjct: 855 --------------------TERLSKGWVNENGASSVFDEC------RDNSLSQSCIDPE 888
Query: 816 SGLTNDVNPAV---PQREKGKMKINDAVEMQSRSSCLRDS-CSQESITDQDEGSCSVDGA 871
+G P + P ++ + I+D + L DS Q IT + + G
Sbjct: 889 NGYK--AAPPITELPNCKEEENAIDDGI--------LGDSDPKQAPITSSVTETPILGGE 938
Query: 872 TSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHL 931
T S A CE+ E ++S+ V VKR ATK+VL+NKAPP+LTIHL
Sbjct: 939 TISSQPAND----------NECENWEDLA--VDSEKVIVKRAATKKVLVNKAPPVLTIHL 986
Query: 932 KRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYV 991
KRFSQDARGR+SKL+GHV+F E I+L YMD C++ D YRL G+VEHLGTMRGGHYV
Sbjct: 987 KRFSQDARGRISKLSGHVDFQEFIDLSQYMDTRCSEEDQPVYRLAGLVEHLGTMRGGHYV 1046
Query: 992 AYVRGGPKNKVKAK-KESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
AY+RGG K ++ KE +WYHASD +VR SLEEVLR EAYILFYE+I
Sbjct: 1047 AYIRGGHKEMRQSDIKEPNSSIWYHASDSFVRRASLEEVLRSEAYILFYERI 1098
>gi|115480011|ref|NP_001063599.1| Os09g0505100 [Oryza sativa Japonica Group]
gi|113631832|dbj|BAF25513.1| Os09g0505100 [Oryza sativa Japonica Group]
gi|125606249|gb|EAZ45285.1| hypothetical protein OsJ_29927 [Oryza sativa Japonica Group]
gi|215695312|dbj|BAG90503.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1055
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 333/1040 (32%), Positives = 488/1040 (46%), Gaps = 215/1040 (20%)
Query: 102 VDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLI 161
V+ +WVCL CG + CGG T P H RHA+Q RH ++++P + +C C +
Sbjct: 130 VEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEV 189
Query: 162 PVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDL 221
+E ++ + TE++ D G VNS GS
Sbjct: 190 SIEMPR------------IETVAAVPTEVAGAADRDL----GLVNSH---------GS-- 222
Query: 222 DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKP 281
V+RGL NLGNTCFFN+VMQ+LLA+ +L+ L ++ G L ++LKKLF ET
Sbjct: 223 ------VIRGLPNLGNTCFFNAVMQSLLALDRLRSKMLGPDVPTGALLMSLKKLFMETSA 276
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
+ ++P++ F ICSK PQF+G+Q DSHELLRC LDGL +EE RK +
Sbjct: 277 SNDVGGALSPKNLFSNICSKYPQFRGFQMQDSHELLRCFLDGLHTEENEARKL-----AD 331
Query: 342 GISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASR 401
SS P VD +FGGQ++STV EC HSS ++ FLDLSLPVP+++ P+K +
Sbjct: 332 EASSATIPTIVDSIFGGQLSSTVSSTECTHSSVKHDQFLDLSLPVPSRRPPAKSVS-SPP 390
Query: 402 AKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGS 461
AK+ K + + R G T T +SN K Q++ E L + S G
Sbjct: 391 AKRNKQSLRDRNKNRRYGKISTRVTPTIEVSN---KEKIQTVAEGNNSL---IPGSESGQ 444
Query: 462 QLLDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQT-VASLDD--FWLDYIE--P 516
+ + P ++C + +VP +EQT ++++D WLDYI+
Sbjct: 445 VVSEKEPEP---SECSESCASVPN-------------LEQTGTSNVEDGTCWLDYIDDAD 488
Query: 517 QTTGDVLDSTWQKSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDE 576
+ ++LDS D IE I ++ G+T QD D
Sbjct: 489 EAKSEILDSA------------------DSIEAGQIWEDKGVTY---GPFLPQD----DA 523
Query: 577 VSDDSLINSNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKI 636
+S + ++ S +GE+ + VILLPY +E +TA ++
Sbjct: 524 LSKEQVLGSEH------------------SGENPIDDATSSQPVILLPY-KEFGSTANEM 564
Query: 637 SG---------------------EGEASSSVVGCRQEEVDFDGFGDLFNEPETAIGPVPR 675
G E A + VG ++ D+ G GD+FNEPE V +
Sbjct: 565 DGTTENSQKPEDAVAPPAVSPLPEDNAQPASVGDGDQD-DYVGLGDMFNEPEV-TSEVKK 622
Query: 676 PSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSK 735
E + V+ SS+S DEVDDS++PVSVE CL F +PELL++ W CE CS
Sbjct: 623 EIGTVEDID---VMAWSSNSAEDEVDDSNAPVSVEGCLALFTEPELLSE--PWHCELCSD 677
Query: 736 TLQ-------RQKLEALKRRAKLASKPLINGGETSNQNDIQGSSLTD---VDSLCNGDA- 784
++ + A + + ++ GG+ + D ++ T+ +D + D
Sbjct: 678 SIACPNTNDGKDDEMATSVNERKDGEEMMAGGDETQDGDKLIANCTEKEGIDQIMATDGC 737
Query: 785 --KTNNDLNT-----FCESLVSQSGKTDCF---NQDCAEVESG-----LTNDVNPAVPQR 829
N+D+N+ SLV D N A +++G T + +R
Sbjct: 738 SDNLNSDMNSKEGGCANSSLVGADNSVDANFPENGKVALLKTGSSLVDTTEQADSKAYRR 797
Query: 830 EKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGS-------CSVDGATSS-------- 874
E + N AVE S S DS + + D S CS D ++S
Sbjct: 798 EIRDLN-NSAVEYTSSSKQPHDSAQHKDEHNVDVASEETTAPECSCDNESASCSTTNKNE 856
Query: 875 ---GYSAEKVYQ----SDSQLVAGNCESEESKVEEINSKIVKVK---------------R 912
G AE++ S++Q + + E V + + ++K +
Sbjct: 857 AECGVGAEEIVTSSLPSETQRILPGEKDNEDVVTRNHGRRKRMKMVGKAHQGQDNQNEQK 916
Query: 913 DATKRVL--------INKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPG 964
+ K+V I+KAPP+LTI+L RFSQD+ GR KL GHV+F E +++RP+MDP
Sbjct: 917 ENGKKVFRSAMRRILISKAPPVLTINLNRFSQDSHGRFKKLKGHVHFKETLDVRPFMDPR 976
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGG--VWYHASDVYVR 1022
++DN YRLVGVVEHLGTM GHYVAYVR G K+ +++ G W++ASD VR
Sbjct: 977 SKENDNTTYRLVGVVEHLGTMAAGHYVAYVRTG---KIGGRQQRSTGSKSWFYASDAQVR 1033
Query: 1023 EVSLEEVLRCEAYILFYEKI 1042
E SLEEVL CEAYILFYE++
Sbjct: 1034 EASLEEVLNCEAYILFYERV 1053
>gi|357159228|ref|XP_003578380.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Brachypodium
distachyon]
Length = 995
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 336/1067 (31%), Positives = 499/1067 (46%), Gaps = 204/1067 (19%)
Query: 51 PHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA---- 106
PHLDK + D +S K +S CE CR+ G R+ + K G++ +K
Sbjct: 56 PHLDK-VLLDFMSSKHVAS----CEHCRDD-GPRKKGGKQQKKKGGGGAAKTQAKVEKSD 109
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
+W+CL CG + CGG T P H RHA+Q RH +++ P + +C C + +E
Sbjct: 110 MWICLDCGRHFCGGAVSETKPYGHARRHAKQDRHWWAARYDEPTVAYCLSCENKVSIE-- 167
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ +++ + + +D FG+ + N+ + + + GN
Sbjct: 168 -------------MPIVES----VVAAPADDKVFGAVDSNALVLA--------NCHGN-- 200
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
V++GL NLGNTCFFN+V+Q+LLA+ +L+ ++ G LT++LKKLF ET
Sbjct: 201 -VIKGLPNLGNTCFFNAVLQSLLALDRLRSKMSGPDVPTGALTMSLKKLFVETSASNDAG 259
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++P+S F ICSK PQF+GYQ DSHELLRC LDGL +EE RK + +G+++
Sbjct: 260 GALSPKSLFSSICSKYPQFRGYQMQDSHELLRCFLDGLRTEETEARKLLEEASSSGVTT- 318
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
VD +FGGQ++STV EC H S Y+ FLDLSLPVP+++ PSK + AK+T
Sbjct: 319 ----IVDSIFGGQLSSTVSSTECTHGSVKYDQFLDLSLPVPSRRPPSKSVS-SPPAKRTN 373
Query: 407 LPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSEN-VVSSSGGSQLLD 465
+ R R G T + + N S+ E+ A +++ ++ S G + +
Sbjct: 374 QSIRDRNRNRRYGKITTTRASPTVVEN------SKERVETVAECNDSQILGSELGQVVNE 427
Query: 466 SVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWLDYIEP--QTTGDVL 523
P+ ++ +++ N L V D D WLD++ +T ++L
Sbjct: 428 KEPEPSEGSESCASVSN---QELKAASYVED----------DISWLDFVADADETRSEIL 474
Query: 524 DSTWQKSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDDSLI 583
DS + E I D +G T + D S D +
Sbjct: 475 DSVC------------------FTEAGQICDSNGATHGSYD-------------SRDDAL 503
Query: 584 NSNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEAS 643
Q+ L ++ S + +D L VILLPY +E+ TTA +I +
Sbjct: 504 PKEQV--------LSSEHSCENIVDDAACL----QPVILLPY-KELCTTANEIYESSQNP 550
Query: 644 SSV-----------------VGCRQEEVDFDGFGDLFNEPETAIGPVPRPSSGTESVGSG 686
V G E+ D+ G GD+FNEPE V + + G
Sbjct: 551 KDVGPAPDISPVTENNAHPLSGGNGEQDDYIGLGDMFNEPE-----VTSEAKEETTAGDI 605
Query: 687 FVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALK 746
V+ SS+S DEVD S++PVSVE CL + +PELL++ +W CE CS T R K
Sbjct: 606 DVMAWSSNSADDEVDVSNAPVSVEGCLALYTEPELLSE--SWHCEHCSSTAARPNTNEGK 663
Query: 747 RRAKLA--------SKPLINGGETSNQND---IQGSSLTDVDSLCNGDAKTNNDLNTFCE 795
K+ S+ ++ G+ D + S D+D + D ++N C
Sbjct: 664 GGDKMVASANDRKDSEKIMASGDARQGGDKVMMNCSKKEDIDQIMTTDCCSDNVDPDLC- 722
Query: 796 SLVSQSGKTDCFNQDCAEVESGLTNDVNPA-------VPQREKGKMKINDAVEMQSRSSC 848
K C N D +G + D A + ++ K N A ++ ++ +
Sbjct: 723 -----CNKVGCANPDAENTSNGNSPDTGNATLLNTGLIVEQPDSKHDGNTA-DIAAQEAS 776
Query: 849 LRDSCSQESITDQDEGSCS--VDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSK 906
SC D D SCS +D SG +AE+V S + E++ ++
Sbjct: 777 APVSCG-----DNDSPSCSTTIDRMVESGANAEEVVTSSLSSQTQSILLSAKDNEDVTTR 831
Query: 907 IV---------------------------KVKRDATKRVLINKAPPILTIHLKRFSQDAR 939
+ KV R A +R+LI+KAPP+LTI L RFSQD+
Sbjct: 832 NMGRGKRVKMVGKAHKGQDNQNKQKEDETKVFRAAMRRILISKAPPVLTITLNRFSQDSH 891
Query: 940 GRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVR---- 995
GR KL GHV F E +++RP++ P ++DN YRLV VVEH+GTM GGHYVAYVR
Sbjct: 892 GRFKKLKGHVCFKETLDVRPFIHPRSKENDNTTYRLVAVVEHMGTMTGGHYVAYVRSGKI 951
Query: 996 GGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
GG + + +A K W++ASD VRE SLEEVL CEAYILFYE++
Sbjct: 952 GGRQQQRRASKS-----WFYASDAQVREASLEEVLNCEAYILFYERV 993
>gi|125564286|gb|EAZ09666.1| hypothetical protein OsI_31949 [Oryza sativa Indica Group]
Length = 1058
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 331/1040 (31%), Positives = 483/1040 (46%), Gaps = 215/1040 (20%)
Query: 102 VDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLI 161
V+ +WVCL CG + CGG T P H RHA+Q RH ++++P + +C C +
Sbjct: 133 VEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCEKEV 192
Query: 162 PVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDL 221
+E ++ + TE++ D G VNS GS
Sbjct: 193 SIEMPR------------IETVAAVPTEVAGAADRDL----GLVNSH---------GS-- 225
Query: 222 DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKP 281
V+RGL NLGNTCFFN+VMQ+LLA+ +L+ L ++ G L ++LKKLF ET
Sbjct: 226 ------VIRGLPNLGNTCFFNAVMQSLLALDRLRSKMLGPDVPTGALLMSLKKLFMETSA 279
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
+ ++P++ F ICSK PQF+G+Q DSHELLRC LDGL +EE RK +
Sbjct: 280 SNDVGGALSPKNLFSNICSKYPQFRGFQMQDSHELLRCFLDGLHTEENEARKL-----AD 334
Query: 342 GISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASR 401
SS P VD +FGGQ++STV EC HSS ++ FLDLSLPVP+++ P+K +
Sbjct: 335 EASSATIPTIVDSIFGGQLSSTVSSTECTHSSVKHDQFLDLSLPVPSRRPPAKSVS-SPP 393
Query: 402 AKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGS 461
AK+ K + + R G T T +SN K Q++ E L + S G
Sbjct: 394 AKRNKQSLRDRNKNRRYGKISTRVTPTIEVSN---KEKIQTVAEGNNSL---IPGSESGQ 447
Query: 462 QLLDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQT-VASLDD--FWLDYIE--P 516
+ + P ++C + +VP +EQT ++++D WLDYI+
Sbjct: 448 VVSEKEPEP---SECSESCASVPN-------------LEQTGTSNVEDGTCWLDYIDDAD 491
Query: 517 QTTGDVLDSTWQKSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDE 576
+ ++LDS D IE I ++ G+T QD D
Sbjct: 492 EAKSEILDSA------------------DSIEAGQIWEDKGVTY---GPFLPQD----DA 526
Query: 577 VSDDSLINSNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKI 636
+S + ++ S +GE+ + VILLPY +E +TA ++
Sbjct: 527 LSKEQVLGSEH------------------SGENPIDDATSSQPVILLPY-KEFGSTANEM 567
Query: 637 SG---------------------EGEASSSVVGCRQEEVDFDGFGDLFNEPETAIGPVPR 675
G E A + VG ++ D+ G GD+FNEPE V +
Sbjct: 568 DGTTENSQKPEDAVAPPAVSPLPEDNAQPASVGDGDQD-DYVGLGDMFNEPEV-TSEVKK 625
Query: 676 PSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSK 735
+ E + V+ SS+S DEVDDS++PVSVE CL F +PELL++ W CE CS
Sbjct: 626 ETGTVEDID---VMAWSSNSAEDEVDDSNAPVSVEGCLALFTEPELLSE--PWHCELCSD 680
Query: 736 TLQ-------RQKLEALKRRAKLASKPLINGGETSNQNDIQGSSLTD---VDSLCNGDA- 784
++ + A + + ++ GG+ + D ++ T+ +D + D
Sbjct: 681 SIACPNTNDGKDDEMATSVNERKDGEEMMAGGDETQDGDKLIANCTEKEGIDQIMATDGC 740
Query: 785 --KTNNDLNT-----FCESLVSQSGKTDCF---NQDCAEVESG-----LTNDVNPAVPQR 829
N+D+N+ SLV D N A +++G T + +R
Sbjct: 741 SDNLNSDMNSKEGGCANSSLVGADNSVDANFPENGKVALLKTGSSLVDTTEQADSKAYRR 800
Query: 830 EKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGS-------CSVDGATSSGYSAEKVY 882
E + N AVE S S DS + + D S CS D ++S + K
Sbjct: 801 EIRDLN-NSAVEYTSSSKQPHDSAQHKDEHNVDVASEETTAPECSCDNESASCSTTNKNE 859
Query: 883 QS----DSQLVAGNCESEESKV---EEINSKIVKVKRDATKRV-LINKA----------- 923
++V + SE ++ E+ N +V KR+ ++ KA
Sbjct: 860 AECGVGAEEIVTSSLPSETQRILPGEKDNEDVVTRNHGRRKRMKMVGKAHQGQDNQNEQK 919
Query: 924 -------------------PPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPG 964
PP+LTI+L RFSQD+ GR KL GHV F E +++RP+MDP
Sbjct: 920 ENGKKVFRSAMRRILISKAPPVLTINLNRFSQDSHGRFKKLKGHVRFKETLDVRPFMDPR 979
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGG--VWYHASDVYVR 1022
++DN YRLVGVVEHLGTM GHYVAYVR G K+ +++ G W++ASD VR
Sbjct: 980 SKENDNTTYRLVGVVEHLGTMAAGHYVAYVRTG---KIGGRQQRSTGSKSWFYASDAQVR 1036
Query: 1023 EVSLEEVLRCEAYILFYEKI 1042
E SLEEVL CEAYILFYE++
Sbjct: 1037 EASLEEVLNCEAYILFYERV 1056
>gi|326505516|dbj|BAJ95429.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1024
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 331/1029 (32%), Positives = 467/1029 (45%), Gaps = 212/1029 (20%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
WVCL CG + CGG T P H RHA+Q RH +++ P + +C C + +E
Sbjct: 113 FWVCLDCGRHFCGGAVSDTKPYGHARRHAKQDRHWWAARYDKPTVAYCLSCENEVSIELP 172
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
E V L + S + V++ S GN
Sbjct: 173 VVEAVVAAPAVEKVVL------------------------GAVDSNALVLANSH--GN-- 204
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
V++GL NLGNTCFFN+V+Q+LLA+ + + L ++ G + ++LKKLF ET
Sbjct: 205 -VIKGLPNLGNTCFFNAVLQSLLALDRFRSKMLGPDVPAGAIAMSLKKLFVETSASNDAG 263
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++P+S F ICSK PQFKGYQ DSHELLRC LDGL +EE RK + G+
Sbjct: 264 GALSPKSLFSSICSKYPQFKGYQMQDSHELLRCFLDGLGTEETEARKAEEDASSAGV--- 320
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK--KTQPASRAKK 404
P VD +FGGQ++STV EC H S ++ FLDLSLPVP+K+ P+K + PA R K+
Sbjct: 321 --PTIVDSIFGGQLSSTVSSTECAHGSVKHDQFLDLSLPVPSKRPPAKSVSSPPAKRTKQ 378
Query: 405 TKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLL 464
+ K+ R T+ + A+ ++S E ++E S GS+L
Sbjct: 379 SIRDRNKNRRYGKIPTRVSPAI-------------AESSKEKIQTVAEGNDSQIPGSELG 425
Query: 465 DSVGSP-TVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWLDYI--EPQTTGD 521
V T ++C + +VP L V D WLDY+ +T +
Sbjct: 426 QVVSEKETEPSECSESCASVPNQELKTACNV----------EADISWLDYLGDADETKSE 475
Query: 522 VLDSTWQKSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQ-DSGEQDEVSDD 580
+LDS S G +ND + +SG DD
Sbjct: 476 ILDS-------------------------ACSTGAGQIWNSNDAIHGSFNSG------DD 504
Query: 581 SLINSNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEG 640
+L + S + D++ LP VILLPY +EI TTAE+I
Sbjct: 505 ALPKEQALISEHSSEKIVDDATC-------LPT------VILLPY-KEIETTAEEIYETA 550
Query: 641 EASSS--------------------VVGCRQEEVDFDGFGDLFNEPETAIGPVPRPSSGT 680
E+S + G E+ D G GD+F ET + + +GT
Sbjct: 551 ESSQHPIVFGPHPADYLAAENNAQPLYGGDGEQDDCFGIGDMFG--ETEVTSDVKKETGT 608
Query: 681 ESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQ 740
G V+ SS+S DEVDDS++PVSVE CL + +PELL++ +W CE CS + +
Sbjct: 609 --TGDIDVMAWSSNSADDEVDDSNAPVSVEGCLSLYTEPELLSE--SWHCEHCSIAVAQP 664
Query: 741 KLEALKRRAKLASKP---------LINGGET---------SNQNDIQGSSLTD------- 775
LK + A+ + +G E S + DI TD
Sbjct: 665 NTNELKEGEETAASANDRKDSAEMMASGDEKQDDGKVPSCSKEEDIDQIMTTDGCSVNVN 724
Query: 776 VDSLCNGDAKTNNDL--------NTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVP 827
D CN N L N+ Q G + ++Q+C ++ S + +
Sbjct: 725 PDMCCNEGVCANPPLVDAENTSGNSPDADTTEQPG-SKTYHQECRDLNSSAVEFTSSSKQ 783
Query: 828 QREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDG---ATSSGYSAEKVYQS 884
E + + V++ + + SC D D SCS S G +AE+V S
Sbjct: 784 SHEFAQHNNSHNVDVAAEETSAPVSCG-----DNDSASCSTTSNKKVESGGANAEEVVTS 838
Query: 885 ----DSQLVAGNCESEESKV-----EEINSKIV------------------KVKRDATKR 917
++Q + + + +E K+V KV R A +R
Sbjct: 839 SLPPETQSILPSAKDDEDGFTRNIGRRKRMKMVVKAHKGQDNQNKQKEDETKVFRAAMRR 898
Query: 918 VLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVG 977
+LI+KAPP+LTI L RFS D+ GR KL GHV F E +++RPYMDP D+D YRLV
Sbjct: 899 ILISKAPPVLTITLNRFSHDSHGRFKKLKGHVRFKEALDIRPYMDPRSKDNDITAYRLVA 958
Query: 978 VVEHLGTMRGGHYVAYVR----GGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCE 1033
VVEH+G+M GGHYVAYVR GG + + +A K W++ASD +VRE SLEEVL CE
Sbjct: 959 VVEHMGSMTGGHYVAYVRSGKIGGRQQQSRASKS-----WFYASDSHVRETSLEEVLNCE 1013
Query: 1034 AYILFYEKI 1042
AYILFYE++
Sbjct: 1014 AYILFYERV 1022
>gi|357148976|ref|XP_003574957.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Brachypodium
distachyon]
Length = 1001
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 350/1128 (31%), Positives = 509/1128 (45%), Gaps = 215/1128 (19%)
Query: 1 MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKPVESTDDGVPVMKERKPCPHLDKGIDS- 59
MGK+ + K++ A ++ AAA + + LQ++ ST++ + + C H G DS
Sbjct: 1 MGKKLKTKAKKAQQREPLAAAGSGDAGLQEAS--NSTEEAAVSASDWQQCGHY--GRDSP 56
Query: 60 --DKISVKIGSSDPI-RCEDCREGV---GDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGC 113
DK+ +I SS + CE CRE + +K KG G K + V+ +W+CL C
Sbjct: 57 HLDKVLREIMSSKHLASCEHCREDAPRKKGGKQQKKKGGGGAAKAQAKVEKSDMWICLDC 116
Query: 114 GHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENK 173
G + CGG T P H RHA+Q RH +++ P + +C C + +E
Sbjct: 117 GRHFCGGAVSETKPYGHARRHAKQDRHWWAARYDEPTVAYCLSCENKVSIE--------- 167
Query: 174 DALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLA 233
+ ++ + +D FG+ + N+ + + + GN V+RGL
Sbjct: 168 ------MPIVD----TVVPAPADDKVFGAVDSNALVLA--------NCHGN---VIRGLP 206
Query: 234 NLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRS 293
NLGNTCFFN+V+Q+LLA+ +L+ ++ G L + LKKLF ET ++ +S
Sbjct: 207 NLGNTCFFNAVLQSLLALDRLRSKMSGPDVPAGALAMLLKKLFLETSASNDAGGALSVKS 266
Query: 294 FFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVD 353
F ICSK PQF+GYQ DSHELLRC LDGL +EE RK + +G P VD
Sbjct: 267 LFSSICSKYPQFRGYQMQDSHELLRCFLDGLRTEETEARKLLEDASNSG-----APTIVD 321
Query: 354 YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQ--PASRAKKTKLPPKK 411
+FGGQ++STV EC H S ++ FLDLSLPVP+++ P+K PA R K+
Sbjct: 322 SIFGGQLSSTVSSTECTHGSVKHDQFLDLSLPVPSRRPPAKSVSSPPAKRT-------KQ 374
Query: 412 SGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPT 471
S R R K + TT+ + +SK ++ T V+ SQ+L S
Sbjct: 375 SIRDRNKNRRYGKITTTRISPTIVENSKEKAET----------VAECNDSQILGS----- 419
Query: 472 VATQCGSALQNVPADPLPQHDQVIDIPVEQTVASL---DDF-WLDYI--EPQTTGDVLDS 525
+ G + +P + +P ++ A+ DD WLD++ +T ++LDS
Sbjct: 420 ---ELGQIVSEKEPEPSEGSESCASVPKQELNAASYVEDDISWLDFVADADETKSEILDS 476
Query: 526 TWQKSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENNDVLFVQDSGEQDEVSDDSLINS 585
S E G + N + G D DD+L
Sbjct: 477 -------------------------VCSTEAGQIWDRNGEMH----GSYD-TRDDTLPKE 506
Query: 586 NQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSS 645
+ S N+ D++ VILLPY +E TTA++I +S
Sbjct: 507 KVMSSEHSCENIVDDAACSQP-------------VILLPY-KEFCTTADEICETVRSSQC 552
Query: 646 --------------------VVGCRQEEVDFDGFGDLFNEPETAIGPVPRPSSGTESVGS 685
V G E+ D+ G GD+FNEPE V + + G
Sbjct: 553 PKDVGPAPDISPVTENNTHPVSGGNGEQDDYIGLGDMFNEPE-----VTSEAKKETTAGV 607
Query: 686 GFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEAL 745
V+ SS+S DEVDDS++ VSVE CL + +PELL++ W CE CS + R
Sbjct: 608 IDVMAWSSNSADDEVDDSNALVSVEGCLALYTEPELLSE--LWHCEHCSSAVARPNTNEG 665
Query: 746 KRRAKLA--------SKPLINGGETSNQND---IQGSSLTDVDSLCNGDAKTNNDLNTFC 794
K ++ S+ ++ G+ D S D+ + D ++N C
Sbjct: 666 KEGDEMVASASDRKDSEKMMASGDARQGGDKVTANCSKKEDIGQIMTTDGCSDNVDPDLC 725
Query: 795 ESLVSQSGKTDCFNQDCAEVESG---------LTNDVNPAVPQREKGKMKINDAVEMQSR 845
K +C N D +G L N V + V++ +
Sbjct: 726 ------CNKWECANPDAENTSNGNSPDTRNGTLLNTVFTVDAIEQPDSKHDGHTVDIAAE 779
Query: 846 SSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSD--SQL--------------- 888
+ SC D S ++D SG +AE+V S SQ
Sbjct: 780 EASAPVSCGD---NDPASSSTTIDRMVESGANAEEVVTSSLPSQTQTILPSVKDNEDVIT 836
Query: 889 ----------VAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDA 938
+AG + + KV R A +R+LI+KAPP+LTI L RFSQD
Sbjct: 837 RNMGRGKRMKMAGRAHKGQDNQNKQKEDETKVFRAAMRRILISKAPPVLTITLNRFSQDP 896
Query: 939 RGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVR--- 995
GR KL GHV F E++++R ++DP + DN YRLV VVEH+GTM GGHYVAYVR
Sbjct: 897 HGRFKKLKGHVCFKEMLDVRSFIDPRSKESDNTTYRLVAVVEHMGTMTGGHYVAYVRSGK 956
Query: 996 -GGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
GG + + +A K W++ASD VRE SLEEVL CEAYILFYE++
Sbjct: 957 IGGRQQQSRASKS-----WFYASDAQVREASLEEVLNCEAYILFYERV 999
>gi|18403083|ref|NP_565753.1| ubiquitin carboxyl-terminal hydrolase 1 [Arabidopsis thaliana]
gi|62901388|sp|Q9FPT5.2|UBP1_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 1; AltName:
Full=Deubiquitinating enzyme 1; Short=AtUBP1; AltName:
Full=Ubiquitin thioesterase 1; AltName:
Full=Ubiquitin-specific-processing protease 1
gi|2914695|gb|AAC04485.1| ubiquitin-specific protease 1 (UBP1), putative [Arabidopsis
thaliana]
gi|330253645|gb|AEC08739.1| ubiquitin carboxyl-terminal hydrolase 1 [Arabidopsis thaliana]
Length = 1083
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 278/742 (37%), Positives = 384/742 (51%), Gaps = 105/742 (14%)
Query: 29 QQSKPVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKK 88
Q + VE T++ M E++ C H DK +D DK+ I S I+C +C E V +RG +
Sbjct: 11 QSEQSVEVTEEFAVTMTEKRSCVHFDKYVDLDKLLKIIKSYQQIKCGECNERVHVKRGSR 70
Query: 89 GKGKHGKKKGSSLVDSK----AIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVI 144
G ++ S D AIW+CL CG+Y CG VGLPT QSHV+ H R TRH LVI
Sbjct: 71 W-GASNRRDWYSSSDQNCARNAIWLCLECGYYVCGDVGLPTEAQSHVMGHNRLTRHRLVI 129
Query: 145 QWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGN 204
Q +NP LRWCF C +L+P + EENGE KD L EVVKLI+ RS S E + SG+
Sbjct: 130 QCKNPQLRWCFSCQSLLPFD-NEENGEKKDLLLEVVKLIRERSPNTYSASFETEFSCSGS 188
Query: 205 VNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT 264
+ I++ DG Y VRGL NLGNTCFFNSVMQNLL++ QL+++FL +L+
Sbjct: 189 IYGGIEAR---------DG---YAVRGLVNLGNTCFFNSVMQNLLSLDQLREHFLKEDLS 236
Query: 265 F-GPLTIALKKLFAETKPETG-LRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLD 322
GPL +LK+LFAE+ E RN INPR F +CS+APQF+GYQQHDSHELLRCLLD
Sbjct: 237 VSGPLVSSLKELFAESNSEASVFRNEINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLD 296
Query: 323 GLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
GL EE + RK+ S+ N S+ Q P +D VFGG+I+STV C+ECGH S VYEPF+DL
Sbjct: 297 GLSIEESSLRKKLGVSDSNDSSTYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEPFMDL 356
Query: 383 SLPVPTKKAPSKKTQPASRAK---KTKLPPKKSGRIRAKGTKD----------------- 422
SLPVP+ K P KK Q S+AK K K S + AK D
Sbjct: 357 SLPVPSMKLPPKKQQILSQAKEVLKNGAVSKDSEVVSAKPASDHNSTVPLFPSDHKIQSR 416
Query: 423 -------THAVTTQSISNLSISSKSQSL-----------------TESTAPLSENV---- 454
T V +S+ + S++++ + T T P E+V
Sbjct: 417 PETSDNETDLVLLSDVSDTAPSTEAKGVNQILVGSTETLMHDNDRTGKTVPDKEDVRATQ 476
Query: 455 ----VSSSGGSQLLDSV---GSPTVATQCGSALQNVPAD--PLPQHDQVIDIPVEQTVAS 505
S+SG S ++D G P + SA Q + + QV+ +P + +
Sbjct: 477 SNEETSASGISAVIDEAQVCGCPDLEQSSSSANQGADEELALMVADSQVLYMPYKDHL-- 534
Query: 506 LDDFWLDYIEPQTTGDVLDSTWQKSDVSVIQDSTDF-AWLDYIEPETISDEHGLTLENND 564
F+ DY+ + + S++ D +D DF ++LD EPE L ++
Sbjct: 535 ---FYDDYMVAEAS-----SSFVSGDHEPKKDYFDFSSFLD--EPEIREGPVFRPLSKSE 584
Query: 565 VLFVQDSGEQDEVSDDSLIN------SNQIPLLDSKPNLKADSSSGDAGEDEL---PLV- 614
V ++G + + SDD ++ S+ D + N+ S E E+ P
Sbjct: 585 VY---EAGFKADCSDDKTVSAGKGEASSSFISSDHEQNIDYVDFSSFFDEPEISERPFFR 641
Query: 615 -VQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQEE-VDFDGFGDLFNEPETAIGP 672
+ SEV + + S +G+GEASSS V E+ +D+ F F+EPE + P
Sbjct: 642 PLSKSEVSEAGFKADCSDDKTVSAGKGEASSSFVSSDHEQNIDYVDFSSFFDEPEISERP 701
Query: 673 VPRPSSGTESVGSGFVVGNSSD 694
RP S +E +GF+ + +D
Sbjct: 702 FFRPLSKSEVSEAGFMAVSGND 723
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 168/411 (40%), Positives = 227/411 (55%), Gaps = 60/411 (14%)
Query: 637 SGEGEASSSVV-GCRQEEVDFDGFGD-LFNEPETAIGPVPRPSSGTESVGSGFVVGNSSD 694
+G+GE SS + G + +D+ F + +F++ T+ PV P S + +GFV SSD
Sbjct: 728 AGKGETFSSFMSGDNERNIDYVEFTNRIFDDRGTSERPVFGPPSKAKVSEAGFV-AVSSD 786
Query: 695 SDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAK--LA 752
SDP +D+SDSPVSV+ CL F K E+L++DNAW CE+CSK L+ Q+L KRR K L+
Sbjct: 787 SDPAVLDESDSPVSVDRCLAQFTKHEILSEDNAWHCENCSKNLKLQRLRE-KRRTKEGLS 845
Query: 753 SKPLINGGETSNQNDIQGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCA 812
++ + G +S ++ + SSL NQ C
Sbjct: 846 NRWVNENGASSAFDECRDSSL----------------------------------NQSCI 871
Query: 813 EVESGLTNDVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGAT 872
++E+G K I + S + D E T Q + +
Sbjct: 872 DLENGY------------KAAPPITKLPNCKEEESAIDDGFVGEENTKQAPITSVTETPL 919
Query: 873 SSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLK 932
G + SD++ CE+ E ++S+ V VKRDA K+VLINKAPP+LTIHLK
Sbjct: 920 LGGETISSQPASDNE-----CENWEDLA--VDSEEVIVKRDARKKVLINKAPPVLTIHLK 972
Query: 933 RFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVA 992
RFSQDARGR+SKL+GHV+F E I+L YMD C++ D YRL G+VEHLG M GHYV+
Sbjct: 973 RFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVYRLAGLVEHLGAMSRGHYVS 1032
Query: 993 YVRGGPKNKVKA-KKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
Y+RGG K + + KE +WYHASD VR SLEEVLR EAYILFYE+I
Sbjct: 1033 YIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEVLRSEAYILFYERI 1083
>gi|242049760|ref|XP_002462624.1| hypothetical protein SORBIDRAFT_02g029180 [Sorghum bicolor]
gi|241926001|gb|EER99145.1| hypothetical protein SORBIDRAFT_02g029180 [Sorghum bicolor]
Length = 1059
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 343/713 (48%), Gaps = 122/713 (17%)
Query: 47 RKPCPHLDKGIDS---DKISVKIGSSDPI-RCEDCRE--------GVGDRRGKKGKGKHG 94
R+ C H G D+ DK+ ++I SS + CE CRE VG ++ K G K
Sbjct: 51 REHCGHY--GHDNAHLDKVLLEILSSKHVASCEHCREDAPRKKGGAVGKQKKKGGTSKGA 108
Query: 95 KKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWC 154
K + D WVCL CG + CGG + T P H RHA+Q RH ++++P + +C
Sbjct: 109 TAKAQAKADKSDTWVCLDCGRHFCGGAVVDTKPYGHARRHAKQDRHWWAARYDDPTVAYC 168
Query: 155 FPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSEST 214
C + +E + ++ + + E VD ED ++S
Sbjct: 169 LSCEKEVSIEMPK------------LETVVAAAVEDKVVDAED-------------TDSW 203
Query: 215 VVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKK 274
+ D + V++GL NLGNTCFFN+V+Q+LLA+ +L+ L ++ G L ++LKK
Sbjct: 204 RLINPDAN-----VIKGLPNLGNTCFFNAVLQSLLAVDRLRRKMLGPDVRTGALAMSLKK 258
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
LFAET ++P++ F ICSK PQF+GYQ DSHELLRC LDGL +EE RK
Sbjct: 259 LFAETSASNHAGGALSPKNLFSSICSKYPQFRGYQMQDSHELLRCFLDGLRTEETEARKL 318
Query: 335 NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK 394
+ G+ P VD +FGGQ++STV EC HSS ++ FLDLSLPVP+++ P+K
Sbjct: 319 EEEASDAGV-----PTIVDSIFGGQLSSTVSSTECSHSSVKHDQFLDLSLPVPSRRPPTK 373
Query: 395 KTQ--PASRAKKT---KLPPKKSGRIRAKGTKDTHAV-TTQSISNLSISSKSQSLTESTA 448
PA R K++ + ++ G++ A+ + + Q+I+ + S S E
Sbjct: 374 SVSSPPAKRTKQSIRDRNKSRRYGKVPARASPSVESKEQIQTIAERNNSQIPGSELEQVV 433
Query: 449 PLSENVVSSSGGSQLLDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLDD 508
+SE SG S+ CGS + +Q VE ++
Sbjct: 434 SVSEKEAEPSGCSE------------SCGS---------VSNQEQNATTNVENSIC---- 468
Query: 509 FWLDYIE--PQTTGDVLDS--TWQKSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENND 564
WLDY+ +T ++LDS + + +D+TD + P+ + L
Sbjct: 469 -WLDYVADVDETKSEILDSADSTGTGQIWECRDATDGP----LHPQDDA------LPKEQ 517
Query: 565 VLFVQDSGEQDEVSDDSLINSNQIPLLDSKPNLKADSSSGDAGEDELPLVVQD-SEVILL 623
+L + SGE + V DD+ + + + LL K EL ++ E I
Sbjct: 518 ILGSEHSGE-NTVDDDASLQT--VILLPYK---------------ELGTTAKERDETIEN 559
Query: 624 PYNEEISTTAEKISGEGEASSSVVG-CRQ-EEVDFDGFGDLFNEPETAIGPVPRPSSGTE 681
YN E + +++ G C E+ D+ G GD+FNEPE V + +S E
Sbjct: 560 SYNSECEVPPLVVVSPVTENNTQPGYCGDVEQDDYIGLGDMFNEPEV-TSEVKKEASKVE 618
Query: 682 SVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCS 734
+ V+ SS+S DEVDDS++PVSVE CL + +PELL++ W CE C+
Sbjct: 619 DID---VMAWSSNSADDEVDDSNAPVSVEGCLALYTEPELLSE--PWLCEHCT 666
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 102/137 (74%), Gaps = 5/137 (3%)
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
KV R A +R+LI+KAPP+LTI+L RFSQD+ GR KL GHV F E+++++P+MDP C +
Sbjct: 924 TKVFRAALRRILISKAPPVLTINLNRFSQDSHGRYKKLKGHVRFKEMLDIQPFMDPRCNE 983
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGG--VWYHASDVYVREVS 1025
+ YRLVGVVEHLGTM GGHY+AYVR K+ +++ G W++ASD VRE S
Sbjct: 984 NTTSTYRLVGVVEHLGTMTGGHYIAYVRAC---KIGGRQQQSSGSKSWFYASDGQVREAS 1040
Query: 1026 LEEVLRCEAYILFYEKI 1042
LEEVL CEAYILFYE++
Sbjct: 1041 LEEVLNCEAYILFYERV 1057
>gi|414589900|tpg|DAA40471.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 983
Score = 286 bits (732), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 226/730 (30%), Positives = 338/730 (46%), Gaps = 119/730 (16%)
Query: 47 RKPCPHLDK-GIDSDKISVKIGSSDPI-RCEDCREGVGDRRGKKGKGKH----------- 93
R+ C H + DK+ ++I SS + CE CRE ++G G +
Sbjct: 51 REHCGHYGRDNAHLDKVLLEILSSKHVASCEHCREDAPRKKGGAGSREKGGKQKKKGGAS 110
Query: 94 --GKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHL 151
K + D+ WVCL CG + CGG T P H RHA+Q RH ++++P +
Sbjct: 111 KGATAKAQAKADTSHTWVCLDCGRHFCGGAADDTKPYGHARRHAKQDRHWWAARYDDPTV 170
Query: 152 RWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKS 211
+C C + VE + L VV + VED G+ + +
Sbjct: 171 AYCLSCEKEVSVEMPK--------LETVV-----------APAVEDKVAGAADTD----- 206
Query: 212 ESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIA 271
+ + D N V++GL NLGNTCFFN+V+Q++LA+ +L+ L ++ G L ++
Sbjct: 207 ---LCGLVNPDAN---VIKGLPNLGNTCFFNAVLQSILAVDRLRRKMLGPDVPTGALAMS 260
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
LKKLFAET +++P++ F ICSK PQF+GYQ DSHELLRC LDGL EE
Sbjct: 261 LKKLFAETSASNHAGGMLSPKNLFSSICSKYPQFRGYQMQDSHELLRCFLDGLRMEETEA 320
Query: 332 RKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA 391
RK + G+ P VD +FGGQ++STV EC HSS ++ FLDLSLPVP+++
Sbjct: 321 RKLAEEASDAGV-----PTIVDSIFGGQLSSTVSSTECSHSSVKHDQFLDLSLPVPSRRP 375
Query: 392 PSK--KTQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSL--TEST 447
P+K + P R K++ K+ R + + +V + SI+ ++ + +E
Sbjct: 376 PTKSVSSPPVKRTKQSIRDRNKNRRYGKVPARASPSVESNKEQVHSIAERNSQIPGSELE 435
Query: 448 APLSENVVSSSGGSQLLDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLD 507
+SE SG S+ CGS +P +Q VE ++
Sbjct: 436 QVVSEKDAEPSGCSE------------SCGS---------VPNQEQNATTNVENSIC--- 471
Query: 508 DFWLDYI--EPQTTGDVLDSTWQKSDVSVIQDSTDFAWLDYIEPETISDEHGLTLENNDV 565
WLDY+ +T ++LDS ++ I + D A P D+ L +
Sbjct: 472 --WLDYVADADETKSEILDSA-DSTETGQIWECRDAAH----GPLHPQDD---ALPKEQI 521
Query: 566 LFVQDSGEQDEVSDDSLINSNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPY 625
L + SGE D SL +P + K + E I PY
Sbjct: 522 LGSEHSGENTVDDDASLQTVILLPYKEFGTTAK-----------------ERDEAIENPY 564
Query: 626 NEEISTTAEKISGEGEASSSVVGCRQ-EEVDFDGFGDLFNEPETAIGPVPRPSSGTESVG 684
N E + +S E ++ C E+ D+ G GD+FNEPE V + + E +
Sbjct: 565 NSECTVPPLVVSPVRENNTQPEYCGDVEQDDYVGLGDMFNEPEV-TSEVKKEAGKVEDID 623
Query: 685 SGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTL-----QR 739
V+ SS+S DEVDDS++PVSVE CL + +PELL++ W CE C+ +R
Sbjct: 624 ---VMAWSSNSADDEVDDSNAPVSVEGCLAVYTEPELLSE--PWLCEHCTNAARINSNER 678
Query: 740 QKLEALKRRA 749
+ + +K RA
Sbjct: 679 ENVMEMKDRA 688
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 58/78 (74%), Gaps = 7/78 (8%)
Query: 886 SQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+QLV GN ++K +E +K+ R A +R+LI+K+PP+LTI+L RFSQD+ GR KL
Sbjct: 911 AQLVQGN----QNKQKEDETKVF---RAALRRILISKSPPVLTINLNRFSQDSHGRYKKL 963
Query: 946 NGHVNFSEIINLRPYMDP 963
GHV F+E+++++P+MDP
Sbjct: 964 KGHVRFNEMLDIQPFMDP 981
>gi|298205248|emb|CBI17307.3| unnamed protein product [Vitis vinifera]
Length = 473
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/200 (63%), Positives = 152/200 (76%), Gaps = 3/200 (1%)
Query: 844 SRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEI 903
S SS +CSQ S++D SCSV S G + K Q +SQ++ G ESEE + +E+
Sbjct: 276 SHSSDTYKTCSQASLSDPASDSCSVHEPNSVGCNTGK--QRNSQMLTGELESEEDEDKEM 333
Query: 904 NSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDP 963
+S+ VKVKRDATKR+LINKAPPILTIHLKRFSQDARGR +KLNGHV F + I+LRP+M+P
Sbjct: 334 DSESVKVKRDATKRILINKAPPILTIHLKRFSQDARGRYNKLNGHVVFKDSIDLRPFMEP 393
Query: 964 GCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKV-KAKKESVGGVWYHASDVYVR 1022
C + Y+YRLVGVVEH G+MR GHYVAYVRGG + +AKKES GVWY+ASD VR
Sbjct: 394 RCVEKGKYEYRLVGVVEHSGSMRMGHYVAYVRGGERRSSGQAKKESGRGVWYYASDASVR 453
Query: 1023 EVSLEEVLRCEAYILFYEKI 1042
E SL+EVLRCEAYILFYEKI
Sbjct: 454 ETSLDEVLRCEAYILFYEKI 473
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 80/101 (79%)
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGR 414
+FGGQI+STV CVECGHSSTVYEPFLDLSLPVPTKK PS+KTQP SR KKTKLPPKK+GR
Sbjct: 1 MFGGQISSTVCCVECGHSSTVYEPFLDLSLPVPTKKPPSRKTQPVSRPKKTKLPPKKAGR 60
Query: 415 IRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVV 455
+R+K KD ++ S+ + S S + +S+AP++E +V
Sbjct: 61 VRSKVNKDADSLVALSVQHPSSDGDSSNQIQSSAPVAEKLV 101
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%)
Query: 678 SGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTL 737
+ E VG+GF+ NSS+SDPDEVD+S+S VS++SCL +F KPELL++++AW CE+CSK L
Sbjct: 192 NANEVVGTGFINRNSSESDPDEVDNSNSMVSIDSCLTYFTKPELLSNEHAWHCENCSKIL 251
Query: 738 QRQKLEALKRRAKLASKPLING 759
Q+++ SK +NG
Sbjct: 252 WDQRIKTRTNLPNTISKIQMNG 273
>gi|49522486|gb|AAH75532.1| usp16 protein [Xenopus (Silurana) tropicalis]
Length = 548
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 196/436 (44%), Gaps = 99/436 (22%)
Query: 33 PVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGK 92
P + + D PV C HL K +D + + + + C++C+ K
Sbjct: 10 PAQDSLDAEPV------CKHLRKALDEGSVKKALVNVEWTVCQECQ----------ADNK 53
Query: 93 HGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVI---QW 146
LV+ ++W+CL CGH CG + H + H R H LV+ W
Sbjct: 54 EKNNSDDELVEDPSVWLCLKCGHRGCGR----NSASQHALNHYNTPRSEPHCLVLSVDMW 109
Query: 147 ENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVN 206
WC+ C+ +P ++ G+ D L K K +ST+ +++D E V
Sbjct: 110 S----AWCYLCDNEVPYNRSSRLGQLVDYLQRKAK-AKSKSTDSAALDEE--------VK 156
Query: 207 SEIKSESTVV----------------SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLA 250
+EI +E+ V + S + + V+GL+NLGNTCFFN+VMQNL
Sbjct: 157 AEIVAENEVKIEDQEEKPKGQAKWDKASSTQNNSTEPTVKGLSNLGNTCFFNAVMQNLSQ 216
Query: 251 MSQLQDYF--------------------LNAELTF----GPLTIALKKLFAETKPETGLR 286
+++ N E+ GPLT+A+ + E + ET +
Sbjct: 217 TPAVRELLNEAKTLKKPVTVPLPDSSSPTNVEVHLEQQPGPLTLAMWQFLTEMQ-ETK-K 274
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEE-----LAFRK--RNSPSE 339
V+ P+ F +C KA +FKGYQQ DS ELLR LLDG+ EE LA K +N+ E
Sbjct: 275 GVVTPKEVFSQVCKKAIRFKGYQQQDSQELLRYLLDGMRGEEIQRVSLAMSKSLQNTLDE 334
Query: 340 -------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP----VPT 388
+ P FVD++FGG++ ST+ C EC S V+EPFLDLSLP V
Sbjct: 335 EEIKKIVKDSEKRRTIPNFVDHLFGGELTSTIMCEECHTVSLVHEPFLDLSLPVLDDVIV 394
Query: 389 KKAPSKKTQPASRAKK 404
KK K + PA K+
Sbjct: 395 KKNSQKSSAPAPERKE 410
>gi|224044360|ref|XP_002189853.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Taeniopygia guttata]
Length = 815
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 189/398 (47%), Gaps = 73/398 (18%)
Query: 35 ESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHG 94
ES D PV C H+ KG+D + + + + C+DC+ D + ++ +
Sbjct: 15 ESPDRLKPV------CNHIRKGLDQGHVRKALQNVEWHVCQDCK---ADSKTQEKAEEEE 65
Query: 95 KKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHL 151
+G+S IW+CL CGH C +P H ++H + R H LV+ ++ +
Sbjct: 66 TDEGTS------IWLCLKCGHRGCDR----NSPDQHALKHFKTPRSDPHCLVLNLDSWSV 115
Query: 152 RWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKS 211
WC+ C+ +P + + G+ D + + V + + + + +VE+ + N + K
Sbjct: 116 -WCYLCDNEVPYKTSTLLGQTVDFVRKQVGIDSSHAEKQETKEVENKKVEKDSKNEQEKE 174
Query: 212 ESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA---------- 261
S S N V+GL+NLGNTCFFN+VMQNL L++ A
Sbjct: 175 VSLKEENSHSAANGEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMPGTTIKIE 234
Query: 262 --ELTF----------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
EL GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQ
Sbjct: 235 SPELCMEPQLIKLDQPGPLTLAMHQFVTEMQ-ETK-KGVVTPKELFAQVCKKAIRFKGYQ 292
Query: 310 QHDSHELLRCLLDGLCSEEL---------AFRKRNSPS------------EGNGISSNQG 348
Q DSHELLR LLDG+ +EE+ A N + + GI S
Sbjct: 293 QQDSHELLRYLLDGMRAEEIQQISIGILKALSDSNKQNEEELKKKIKEYEKKKGIQS--- 349
Query: 349 PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
FVD +FGG++ ST+ C EC S V+E FLDLSLP+
Sbjct: 350 --FVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPI 385
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 90/148 (60%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ APPILT+HLKRF Q A L K+N H+ F E+I+L P+ C +
Sbjct: 668 VYTNAKKQMLISLAPPILTLHLKRFQQ-AGFNLQKVNRHIKFPEVIDLAPFCTAKCKNVA 726
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKN----------KVKAKK-ESVGGVWY 1014
+ Y L GVVEH GTMR GHY AYV+ N K +A + E V G W+
Sbjct: 727 EGNTKVLYSLYGVVEHSGTMRSGHYTAYVKMRAMNNHLSDLVLRGKSQASETEPVKGQWF 786
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ VS+ +VL +AY+LFYE++
Sbjct: 787 HISDTHVQPVSVSKVLSSQAYLLFYERL 814
>gi|302818855|ref|XP_002991100.1| hypothetical protein SELMODRAFT_2225 [Selaginella moellendorffii]
gi|300141194|gb|EFJ07908.1| hypothetical protein SELMODRAFT_2225 [Selaginella moellendorffii]
Length = 320
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 109/178 (61%), Gaps = 19/178 (10%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN---AELTFGPLTIALKKLFAE--------- 278
GL NLGNTCFFNSVMQNLLA+ L+DYFLN A + GPLT AL++ F E
Sbjct: 1 GLVNLGNTCFFNSVMQNLLAVRYLKDYFLNPVAAGASEGPLTSALRRFFLEINGDNLEAF 60
Query: 279 ---TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN 335
K NP+ FG +CSK+ +F GY Q DSHELLRCLLDGL E K
Sbjct: 61 SGNAKKRHRDYTTYNPKGLFGALCSKSSRFSGYHQQDSHELLRCLLDGLQVEG----KHK 116
Query: 336 SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS 393
E N + + FVD++FGGQ ASTV C ECGHSS+V EPFLD+SLP+P A S
Sbjct: 117 ESEEKNSANGKEDHTFVDHLFGGQFASTVTCCECGHSSSVLEPFLDVSLPIPFITAKS 174
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 92/129 (71%), Gaps = 9/129 (6%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDN 970
+R ATKR++I KAPP+LT+HLKRF+QD RGRLSKL GHV F E++NL P++ T D
Sbjct: 201 RRKATKRLVIRKAPPVLTVHLKRFAQDMRGRLSKLTGHVAFDELLNLSPFLS---TSRDG 257
Query: 971 YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
YRLVGVVEH GTM+GGHYVA+VRGG K WY+ SD VR +L++VL
Sbjct: 258 GLYRLVGVVEHSGTMKGGHYVAFVRGGSAGDGKEN------FWYYISDSDVRRTTLDQVL 311
Query: 1031 RCEAYILFY 1039
R EAY+LFY
Sbjct: 312 RSEAYLLFY 320
>gi|118403609|ref|NP_001072158.1| ubiquitin carboxyl-terminal hydrolase 16 [Xenopus (Silurana)
tropicalis]
gi|123911986|sp|Q0VA64.1|UBP16_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|111308974|gb|AAI21231.1| ubiquitin specific peptidase 16 [Xenopus (Silurana) tropicalis]
Length = 864
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 193/428 (45%), Gaps = 95/428 (22%)
Query: 33 PVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGK 92
P + + D PV C HL K +D + + + + C++C + K
Sbjct: 10 PAQDSLDAEPV------CKHLRKALDEGSVKKALVNVEWTVCQEC----------QADNK 53
Query: 93 HGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVI---QW 146
LV+ ++W+CL CGH CG + H + H R H LV+ W
Sbjct: 54 EKNNSDDELVEDPSVWLCLKCGHRGCGR----NSASQHALNHYNTPRSEPHCLVLSMDMW 109
Query: 147 ENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVN 206
WC+ C+ +P ++ G+ D L K K +ST+ +++D E V
Sbjct: 110 S----AWCYLCDNEVPYNRSSRLGQLVDYLQRKAK-AKSKSTDSAALDEE--------VK 156
Query: 207 SEIKSESTVV----------------SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLA 250
+EI +E+ V + S + + V+GL+NLGNTCFFN+VMQNL
Sbjct: 157 AEIVAENEVKIEDQEEKPKGQAKWDKASSTQNNSTEPTVKGLSNLGNTCFFNAVMQNLSQ 216
Query: 251 MSQLQDYF--------------------LNAELTF----GPLTIALKKLFAETKPETGLR 286
+++ N E+ GPLT+A+ + E + ET +
Sbjct: 217 TPAVRELLNEAKTLKKPVTVPLPDSSSPTNVEVHLEQQPGPLTLAMWQFLTEMQ-ETK-K 274
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEE-----LAFRK--RNSPSE 339
V+ P+ F +C KA +FKGYQQ DS ELLR LLDG+ EE LA K +N+ E
Sbjct: 275 GVVTPKEVFSQVCKKAIRFKGYQQQDSQELLRYLLDGMRGEEIQRVSLAMSKSLQNTLDE 334
Query: 340 -------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
+ P FVD++FGG++ ST+ C EC S V+EPFLDLSLPV
Sbjct: 335 EEIKKIVKDSEKRRTIPNFVDHLFGGELTSTIMCEECHTVSLVHEPFLDLSLPVLDDVIV 394
Query: 393 SKKTQPAS 400
K +Q +S
Sbjct: 395 KKNSQKSS 402
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++L++ PILT+HLKRF Q+ L K+N H+ F E+++L P+ C +
Sbjct: 716 VYTNAKKQMLVSDPSPILTLHLKRFQQNGFN-LRKINRHIKFPEVLDLAPFCTSKCKNIP 774
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG------------GVW 1013
Y L GV+EH G+MR GHY A+V+ N+ + G G W
Sbjct: 775 AGESRLLYSLYGVIEHSGSMRSGHYTAFVKLRRPNQQLCEMVLKGVIPEVSGSEPGQGSW 834
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
YH SD +V+ VSL VL +AY+LFYE++
Sbjct: 835 YHISDSHVQAVSLSRVLSSQAYLLFYERM 863
>gi|302819973|ref|XP_002991655.1| hypothetical protein SELMODRAFT_2432 [Selaginella moellendorffii]
gi|300140504|gb|EFJ07226.1| hypothetical protein SELMODRAFT_2432 [Selaginella moellendorffii]
Length = 321
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 108/178 (60%), Gaps = 19/178 (10%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN---AELTFGPLTIALKKLFAE--------- 278
GL NLGNTCFFNSVMQNLLA+ L+DYFLN + GPLT AL++ F E
Sbjct: 1 GLVNLGNTCFFNSVMQNLLAVRYLKDYFLNPVAGGASEGPLTSALRRFFLEINGDNLEAF 60
Query: 279 ---TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN 335
K NP+ FG +CSK+ +F GY Q DSHELLRCLLDGL E K
Sbjct: 61 SGNAKKRHRDYTTYNPKGLFGALCSKSSRFSGYHQQDSHELLRCLLDGLQVEG----KHK 116
Query: 336 SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS 393
E N + + FVD++FGGQ ASTV C ECGHSS+V EPFLD+SLP+P A S
Sbjct: 117 ESEEKNSTNGKEDHTFVDHLFGGQFASTVTCCECGHSSSVLEPFLDVSLPIPFITAKS 174
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 92/130 (70%), Gaps = 9/130 (6%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDN 970
+R ATKR++I KAPP+LT+HLKRF+QD RGRLSKL GHV F E++NL P++ D
Sbjct: 201 RRKATKRLVIRKAPPVLTVHLKRFAQDMRGRLSKLTGHVAFDELLNLSPFLS---ASRDG 257
Query: 971 YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
YRLVGVVEH GTM+GGHYVA+VRGG K WY+ SD VR +L++VL
Sbjct: 258 GLYRLVGVVEHSGTMKGGHYVAFVRGGSAGDGKEN------FWYYISDSDVRRTTLDQVL 311
Query: 1031 RCEAYILFYE 1040
R EAY+LFYE
Sbjct: 312 RSEAYLLFYE 321
>gi|260789580|ref|XP_002589824.1| hypothetical protein BRAFLDRAFT_90534 [Branchiostoma floridae]
gi|229275007|gb|EEN45835.1| hypothetical protein BRAFLDRAFT_90534 [Branchiostoma floridae]
Length = 948
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 205/442 (46%), Gaps = 95/442 (21%)
Query: 35 ESTDDGVPVMKERK-PCPHLDKGIDSDKISVKIGSSDP-IRCEDC-REGVGDRRGKKGKG 91
+S+D+GV + CPH++KG++ ++ + P + C C +EG RG+
Sbjct: 39 DSSDEGVEAAGQSGVQCPHINKGVNQAQVKKALQKGSPHLECGGCSKEGASGARGRTEPA 98
Query: 92 KHGKKKGSSLVDS--KAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQ- 145
S+L + +W+CL CGH CG + H ++H R H +V+
Sbjct: 99 PD-----STLAEELEATLWLCLQCGHQGCGR----NSRSQHALKHYETPRSGCHSVVVNT 149
Query: 146 --WENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSG 203
W + WC+ C+ + ++ ++ L+ V ++ R I + + G
Sbjct: 150 TTW----MVWCYECDNDVAFDRGKK-------LALCVDFVR-RHYGIPRLPNDST--GKK 195
Query: 204 NVNSEIKSESTVVSGS-----------DLDGNACYVVRGLANLGNTCFFNSVMQNLLAMS 252
+ E TV +G+ + + V+GL+NLGNTCFFN+VMQNL
Sbjct: 196 SPQQTSPREETVDAGAMAGKGADKYNLNTSKSPLARVKGLSNLGNTCFFNAVMQNLSQTH 255
Query: 253 QLQDYFL----------------NAELTFGPLTI-----------ALKKLFAETKPETGL 285
L+ + + +L PL + AL E +G
Sbjct: 256 VLEAALMWSTKGGTMTLYPPTVNDLQLQLEPLEVMLAAPPSALQSALLSFLREMTTPSGK 315
Query: 286 RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISS 345
N +NP+ FG +C K+P+FKG+QQ DSHELLR LLDGL EEL R ++ G+S
Sbjct: 316 AN-LNPKHLFGQVCQKSPRFKGFQQQDSHELLRYLLDGLRLEELK-RVKSGILRKFGLSE 373
Query: 346 NQGP--------------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ P FVD+VFGGQ+ +TV+C EC + S V+EPFLD+SLP
Sbjct: 374 STNPKTVEDEVRGRVKDYGRLVRETFVDFVFGGQMVNTVQCEECKNISQVHEPFLDISLP 433
Query: 386 VPTKKA-PSKKTQPASRAKKTK 406
+ +++ PS+ + P+S +K K
Sbjct: 434 IVEERSPPSRGSNPSSNKQKGK 455
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 107/228 (46%), Gaps = 63/228 (27%)
Query: 877 SAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRD-----ATKRVLINKAPPILTIHL 931
S EK ++D Q + E E+ K + I + K K D A+K++L++ P +LT+HL
Sbjct: 720 SVEKGSENDVQDLKTQDEPEDDKTKIIPQEREKDKDDTVYCNASKQMLVSWPPDVLTLHL 779
Query: 932 KRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-HDNYD---YRLVGVVEHLGTMRG 987
KRF Q A L K+N HVNF +++L P+ C DNY+ Y L G+VEH G++R
Sbjct: 780 KRFQQ-AGYSLRKVNRHVNFPLMLDLAPFCTSTCKPIADNYNRILYTLYGIVEHSGSLRA 838
Query: 988 GHYVAYV-----------------------RGGPKNKVKAKKESVG-------------- 1010
GHY AYV +G P+NKV A +
Sbjct: 839 GHYTAYVKVRQASDKLRTQVLNKPNSWNYGKGTPRNKVGAGGQQGNLVNGDVSLDESDDE 898
Query: 1011 ----------------GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WYH SD +V EVS +VL +A++LFYE++
Sbjct: 899 VDWKGGDSAPLPPLPEGKWYHISDTHVSEVSESKVLNAQAFLLFYERL 946
>gi|387019603|gb|AFJ51919.1| Ubiquitin carboxyl-terminal hydrolase 16-like [Crotalus adamanteus]
Length = 825
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 184/382 (48%), Gaps = 61/382 (15%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + D C+DCR + D + + K + K S IW+
Sbjct: 24 CKHLRKGLEQGLLKKTLQTVDLNSCQDCR--IDDNKTDEKSDKRAEDKPS-------IWL 74
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ EN + WC+ C+ I +
Sbjct: 75 CLKCGHRGCGR----NSQEQHALKHYETPRSELHCLVLNVENWCV-WCYLCDDEIQYNSS 129
Query: 167 EENGENKDALSE--VVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVV--SGSDLD 222
G+ D + + V + S + +E+ E + + + + + L+
Sbjct: 130 TRLGQLVDFIRKQTCVNIPNTASKNEENKPLENKKLKDHKNEEEKEKKEILFKDNKNQLN 189
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL----------TFG------ 266
GN+ V+GL+NLGNTCFFN+V+QNL S L++ ++ F
Sbjct: 190 GNSEMTVKGLSNLGNTCFFNAVLQNLSQTSVLRELLKEVKMPDSTITLEPPEFSITEPLE 249
Query: 267 -------PLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
PLT+A+ + AE + ET +VI PR F IC KA +FKGYQQ DS ELLR
Sbjct: 250 VMLDPPRPLTLAMCQFLAEMQ-ETKKGSVI-PRELFSQICKKATRFKGYQQQDSQELLRY 307
Query: 320 LLDGLCSEELA------FRKRNSPSEGNGISSNQGPV---------FVDYVFGGQIASTV 364
LLDG+ +EE+ F+ N+ + N + FVD +FGG++ ST+
Sbjct: 308 LLDGMRTEEIQRTSAAIFKALNNSDKENEELKKKVKEYEKKKLMHSFVDRIFGGELTSTI 367
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC S V+EPFLDLSLPV
Sbjct: 368 MCEECQTVSLVHEPFLDLSLPV 389
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 16/158 (10%)
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLR 958
K +IN+K V +A K++LI+ APPILT+HLKRF Q A L K+N H+ F E+++L
Sbjct: 669 KTNKINAKKY-VYTNAKKQMLISHAPPILTLHLKRFQQ-AGYNLQKVNKHITFPEVMDLA 726
Query: 959 PYMDPGCTD----HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVK----------A 1004
P+ C + Y L G+VEH GTMR GHY AYV+ +++ +
Sbjct: 727 PFCSIKCKNVREGTSKVLYSLYGIVEHSGTMRSGHYTAYVKTSTTSQLSDLVHDKIQQTS 786
Query: 1005 KKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+ ES W+H SD +V+ VS+ +VL+ +AY+LFYE+I
Sbjct: 787 ESESPRRQWFHVSDTHVQAVSISKVLKSQAYLLFYERI 824
>gi|126325335|ref|XP_001373230.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Monodelphis
domestica]
Length = 814
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 187/399 (46%), Gaps = 73/399 (18%)
Query: 38 DDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKK 97
DD +++ R C H+ KG++ + + + C++C+ + +R K +G++
Sbjct: 14 DDDSEILEPR--CRHIKKGLEQSGLKKSLMNVQWNVCQECK--IDNRTNDKPEGENK--- 66
Query: 98 GSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWC 154
++ +IW+CL CGH CG + + H ++H R H LV+ N + WC
Sbjct: 67 -----ENPSIWLCLKCGHQGCGRY----SQEQHALKHYTTPRSEPHCLVLSLYNWSV-WC 116
Query: 155 FPCNTLIPVEKTEENGENKDALSEVVKLIKGR--STEISSVDVEDAWF--GSGNVNSEIK 210
+ C+ + ++ G+ D + + + + R S E ++E+ S N K
Sbjct: 117 YLCDEEVQYSSSDRLGQLVDYIRKQINVKTSRQASKEQGKAEIENKKLEKDSKNEQEREK 176
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNL---LAMSQL------------- 254
E+ S L+ A V+GL+NLGNTCFFN+VMQNL L + +L
Sbjct: 177 KENMTKENSPLNAAAHMTVKGLSNLGNTCFFNAVMQNLSQTLVLRELLKEVKMSGTIVKI 236
Query: 255 --QDYFLNAELTF-----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKG 307
D L L GPLT A+ + E ET R ++ P+ F +C KA +FKG
Sbjct: 237 ESPDLSLTEPLEINLGPPGPLTSAMCQFLNEMH-ETK-RGIVTPKELFSQVCKKAVRFKG 294
Query: 308 YQQHDSHELLRCLLDGLCSEELA--------------------FRKRNSPSEGNGISSNQ 347
+QQ DS ELLR LLDG+ +EE+ R+R E
Sbjct: 295 FQQQDSQELLRYLLDGMRAEEIQRVSAGILTALGSPTGKPDEDLRRRIKEHE----RKKS 350
Query: 348 GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P FVD +FGG++ ST+ C +C S V+E FLDLSLPV
Sbjct: 351 MPSFVDRIFGGELTSTIMCEQCKTVSLVHESFLDLSLPV 389
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 109/201 (54%), Gaps = 22/201 (10%)
Query: 860 DQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK--VKRDATKR 917
D DEGS + S EK+ Q ++L+ C + + +SK K V DA K+
Sbjct: 615 DTDEGS--IHHCLYQFTSNEKL-QGSNKLLCDVCTQRQRPGPKAHSKGEKKCVYTDAKKQ 671
Query: 918 VLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD----HDNYDY 973
+LI++APPILT+HLKRF Q A L K+N H+ F ++I+L P+ C + + Y
Sbjct: 672 MLISQAPPILTLHLKRFQQ-AGLNLCKVNKHIKFPDVIDLAPFCTIKCKNVAEGNTKVLY 730
Query: 974 RLVGVVEHLGTMRGGHYVAYVRGGPKNK------------VKAKKESVGGVWYHASDVYV 1021
L GVVEH GTMR GHY AYV+ N + + ES G W+H SD +V
Sbjct: 731 SLYGVVEHSGTMRWGHYTAYVKTRTSNSHLYNLVLDGTSPQEFENESTKGQWFHISDTHV 790
Query: 1022 REVSLEEVLRCEAYILFYEKI 1042
+ V +VL +AY+LFYE+I
Sbjct: 791 QAVPASKVLNSQAYLLFYERI 811
>gi|86169703|gb|AAI12387.1| Usp16 protein, partial [Rattus norvegicus]
Length = 664
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 179/389 (46%), Gaps = 77/389 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + + C+DC+ K K + ++W+
Sbjct: 24 CRHLRKGLEQGNLKKALVNVEWNICQDCK-----------TDNKVKDKSEEEAEDPSVWL 72
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ I +
Sbjct: 73 CLKCGHQGCGR----DSQEQHALKHYTTPRSEPHYLVLSLDNWSV-WCYKCDEEIKYCSS 127
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--------VDVEDAWFG--SGNVNSEIKSESTVV 216
+ L +VV ++ ++ I+S +++E+ S N KSES
Sbjct: 128 -------NRLGQVVDYVRKQAGRITSKPEKNNGHIELENKKLEKESKNEQEREKSESMAK 180
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------- 265
LD + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 181 ENIPLDSASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLA 240
Query: 266 ------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS 313
GPLT+A+ + E + + ++ P+ F +C KA +FKGYQQ DS
Sbjct: 241 LTEPLEVNLEPPGPLTLAMSQFLNEM--QENKKRIVTPKELFSQVCKKATRFKGYQQQDS 298
Query: 314 HELLRCLLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFG 357
ELLR LLDG+ +EE + NS + + N+ P FVD +FG
Sbjct: 299 QELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKLDEEVKNKVKDYEKKKAIPSFVDRIFG 358
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G++ ST+ C +C S V+E FLDLSLPV
Sbjct: 359 GELTSTIMCDDCRTVSLVHESFLDLSLPV 387
>gi|354466190|ref|XP_003495557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Cricetulus griseus]
gi|344245329|gb|EGW01433.1| Ubiquitin carboxyl-terminal hydrolase 16 [Cricetulus griseus]
Length = 823
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 190/403 (47%), Gaps = 69/403 (17%)
Query: 30 QSKPVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKG 89
+S PV+++ + M C HL KG++ + + + + C+DC+ D + K+G
Sbjct: 9 KSVPVKASSESAEPM-----CRHLRKGLEQGNLKKALANVEWNICQDCK---TDNKVKEG 60
Query: 90 KGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQW 146
+ + ++W+CL CGH CG + + H ++H R H LV+
Sbjct: 61 PEEEA--------EDPSVWLCLKCGHQGCGR----DSQEQHALKHYSTPRSEPHYLVLSL 108
Query: 147 ENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISS--VDVEDAWF--GS 202
+N + WC+ C+ + + G+ D + + + E + +++E+ S
Sbjct: 109 DNWSV-WCYKCDEEVKYCSSNRLGQVVDYVRKQAGTTTPKPAEKDNGHIELENKKLEKDS 167
Query: 203 GNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE 262
N + K+E+ +D + +V+GL+NLGNTCFFN+VMQNL L++ +
Sbjct: 168 KNEQEKEKTENMAKENIPMDSASQMIVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVK 227
Query: 263 LTF-----------------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCIC 299
++ GPLT+A+ + E + + ++ P+ F +C
Sbjct: 228 MSGTIVKIEPPDLALTEPLEVNLEPPGPLTLAMSQFLNEMQENK--KRIVTPKELFSQVC 285
Query: 300 SKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR-------NSPSEGNGISSNQG---- 348
KA +FKGYQQ DS ELLR LLDG+ +EE + NS + + N+
Sbjct: 286 KKATRFKGYQQQDSQELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKLDEEVKNKVKEYE 345
Query: 349 -----PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P FVD +FGG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 346 KKKTIPSFVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPV 388
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 20/197 (10%)
Query: 864 GSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK--VKRDATKRVLIN 921
CS+ EK+ Q ++L+ C + + N K K V +A K++L++
Sbjct: 628 AECSIQHCLYQFTRNEKL-QDANKLLCDVCTRRQGNGPKANIKGEKKHVYTNAKKQMLVS 686
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT----DHDNYDYRLVG 977
APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C + Y L G
Sbjct: 687 LAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEESTRVLYSLYG 745
Query: 978 VVEHLGTMRGGHYVAYVRG-GPKNKVK-----------AKKESVGGVWYHASDVYVREVS 1025
VVEH GTMR GHY AY + P + + + ES G W+H SD +V+ V
Sbjct: 746 VVEHSGTMRSGHYTAYAKARTPSSHLSNFVLHGDIPQDCEMESTKGQWFHISDTHVQAVP 805
Query: 1026 LEEVLRCEAYILFYEKI 1042
+ +VL +AY+LFYE+I
Sbjct: 806 VTKVLNSQAYLLFYERI 822
>gi|118083792|ref|XP_416693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Gallus gallus]
Length = 810
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 76/387 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K +K +S +IW+
Sbjct: 16 CKHIRKGLEQSHLKKALLNVEWHVCQDC----------KADNKTQEKSEEETDESPSIWL 65
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ +P +
Sbjct: 66 CLKCGHRGCGR----NSQEQHALKHYTTPRSDPHCLVLSLDNWSV-WCYICDNEVPYSTS 120
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNV----NSEIKSESTVVSGSDLD 222
G+ D + + V + S+ + E+ G+ V +E + E + S
Sbjct: 121 TRLGQTVDYIKKQVCV---NSSHLEKQQ-ENKDVGNKKVEKDSRNEQQKEVLLKESSHSS 176
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA------------ELTF----- 265
++ V+GL+NLGNTCFFN+VMQNL L++ A EL+
Sbjct: 177 TSSEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMPDTTVKIDSPELSMEPQLV 236
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET R V+ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 237 KLDQPGPLTLAMHQFLTEMQ-ETK-RGVVTPKELFAQVCKKAIRFKGYQQQDSQELLRYL 294
Query: 321 LDGLCSEEL---------AFRKRNSPSE------------GNGISSNQGPVFVDYVFGGQ 359
LDG+ +EE+ A + +E GI S FVD +FGG+
Sbjct: 295 LDGMRAEEIQRISVGILKALTDSDKQNEEELRKKIKEYEKKKGIKS-----FVDRIFGGE 349
Query: 360 IASTVRCVECGHSSTVYEPFLDLSLPV 386
+ ST+ C EC S V+E FLDLSLPV
Sbjct: 350 LTSTIMCEECRTVSLVHESFLDLSLPV 376
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 21/151 (13%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ APPILT+HLKRF Q A L K+N H+ F E+I+L P+ C +
Sbjct: 662 VYTNAKKQMLISLAPPILTLHLKRFQQ-AGFNLRKVNRHIKFPEVIDLAPFCTVKCKNVA 720
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAY--------------VRGGPKNKVKAKKESVGG 1011
+ Y L GVVEH GTMR GHY AY ++G P ++ E + G
Sbjct: 721 EGNTKVLYSLYGVVEHSGTMRSGHYTAYAKMRNMNNHLSDLILQGQPPQALET--EPIKG 778
Query: 1012 VWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W+H SD +V+ VS +VL +AY+LFYE++
Sbjct: 779 QWFHISDTHVQAVSTSKVLSSQAYLLFYERL 809
>gi|390349097|ref|XP_790411.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Strongylocentrotus purpuratus]
Length = 1134
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 188/422 (44%), Gaps = 86/422 (20%)
Query: 48 KPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGS-----SLV 102
K C HLDK + + + + + +C C G KG G KK S V
Sbjct: 37 KECTHLDKSVSLNNVKKGLKNYGFGQCSLCA-------GDKGSGGSVKKDSSIDDVDGEV 89
Query: 103 DSKAIWVCLGCGHYACGGVGLPTTPQSHVVRH---ARQTRHPLVIQWENPHLRWCFPCNT 159
IW+CL CG C ++P H ++H AR HPL + N ++ WC+ C+
Sbjct: 90 FEPVIWLCLACGSQGC----CRSSPAQHALKHFETARSNSHPLAVCLANWNV-WCYKCDD 144
Query: 160 LIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNV---NSEIKSESTVV 216
I ++++ GE D + + K S +A +V +S I+S
Sbjct: 145 AISPSESKKLGECMDWIKKQAFQQKPAEKSASKKKSREADVDESHVRTSSSPIRSPLLTR 204
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------------LNAEL 263
GS VRGL+NLGNTCFFN+VMQNL+ L+D L+ L
Sbjct: 205 EGS------LPKVRGLSNLGNTCFFNAVMQNLIQTHVLRDLLHEKWSTGKQLDVPLDTHL 258
Query: 264 TFG----------------PLTIALKKL---------FAETKPETGLRNVINPRSFFGCI 298
+ P+TI + + F + + INPR+ F +
Sbjct: 259 SVSTNQNGIGKDAEKEPLVPITITIASMQPLTSSLIEFLDEMHKPTKSTTINPRALFNQV 318
Query: 299 CSKAPQFKGYQQHDSHELLRCLLDGLCSEEL--------------AFRKRN----SPSEG 340
C+KA +FKGYQQ DSHELLR LLDG+ +EE+ + +N + +
Sbjct: 319 CNKASRFKGYQQQDSHELLRYLLDGMKAEEIKRMQQGLISTFDVKKVKAKNFDEATKKKI 378
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
S+ FVD VFGG + S+V+C EC + S + EPFLDLSLP+ K SK+ +S
Sbjct: 379 KEYGSHSKHTFVDTVFGGHLISSVKCNECLNISEILEPFLDLSLPITEAKG-SKRNLSSS 437
Query: 401 RA 402
++
Sbjct: 438 KS 439
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Query: 913 DATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD 972
DA+K++LI++ PPILT+HLKRF Q L K+ H+ F I+++ P+ C + N +
Sbjct: 911 DASKQLLIHQPPPILTLHLKRFQQVGYN-LRKITRHIEFPLILDVAPFCSTACKRYANSE 969
Query: 973 ----YRLVGVVEHLGTMRGGHYVAYVR 995
Y L GVVEH G ++ GHY A+V+
Sbjct: 970 NRVLYGLYGVVEHSGRLQFGHYTAFVK 996
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WYH SD +V EVS +VL +AYILFYE++
Sbjct: 1101 GKWYHISDTHVTEVSENKVLGAQAYILFYERL 1132
>gi|147904708|ref|NP_001083244.1| ubiquitin carboxyl-terminal hydrolase 16 [Xenopus laevis]
gi|82186810|sp|Q6PAW2.1|UBP16_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|37747736|gb|AAH60022.1| MGC68701 protein [Xenopus laevis]
Length = 901
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 190/425 (44%), Gaps = 87/425 (20%)
Query: 33 PVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGK 92
P + D PV C HL K +D + + + + C+DC+ K K
Sbjct: 10 PAQDFLDAEPV------CKHLRKALDDGSVKRALVNVEWTMCQDCQ--------ADNKEK 55
Query: 93 HGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVI---QW 146
+ + S+ + ++W+CL CGH CG + H + H R H LV+ W
Sbjct: 56 NNSEDESA--EDPSVWLCLKCGHRGCGRNSVA----QHALNHYNTPRSEPHCLVLNVDMW 109
Query: 147 ENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLI-KGRSTEISSVDVEDAWFGSGNV 205
WC+ C+ +P +T G+ D L K K ++ +S+ +V+ V
Sbjct: 110 S----AWCYLCDNEVPYNRTSRLGQLVDYLQRKAKAKNKNSNSVVSNEEVKTEIVTENEV 165
Query: 206 NS-EIKSESTVVSGSDLDGNACY------VVRGLANLGNTCFFNSVMQNLL---AMSQLQ 255
+ + E V ++ V+GL+NLGNTCFFN+VMQNL A+S+L
Sbjct: 166 KKIQYQDEKPDVQAKQEKASSTQKISTEPTVKGLSNLGNTCFFNAVMQNLSQTPALSELL 225
Query: 256 DYF---------------------LNAELTFGPLTIALKKLFAETKPETGLRNVINPRSF 294
+ +N E GPLT+A+ + E ET + V+ P+
Sbjct: 226 NEVKTFRKPVTVLLPDSSSPKILEVNLEQQPGPLTLAMWQFLTEMH-ETK-KGVVTPKEL 283
Query: 295 FGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQG------ 348
F +C KA +FKGYQQ DS ELLR LLDG+ EE+ +R + + + S
Sbjct: 284 FSQVCKKAIRFKGYQQQDSQELLRYLLDGMRGEEI---QRVTLAMSKSLQSTLDEEEIKK 340
Query: 349 -----------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV---PTKKAPSK 394
P FVD +FGG++ ST+ C EC S V+EPFLDLSLPV K SK
Sbjct: 341 IVKDYEKRRTIPNFVDCLFGGELTSTIMCEECHTVSLVHEPFLDLSLPVLDDLIVKKNSK 400
Query: 395 KTQPA 399
T PA
Sbjct: 401 STPPA 405
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++L++ PILT+HLKRF Q+ L K+N H+ F E+++L P+ C +
Sbjct: 753 VYTNAKKQMLVSNPSPILTLHLKRFQQNGFN-LRKINRHIKFPEVLDLAPFCTAKCKNVP 811
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG------------GVW 1013
Y L GV+EH G+MR GHY A+V+ N+ K G G W
Sbjct: 812 EGESRLLYSLYGVIEHSGSMRSGHYTAFVKLRHPNQQLCKMLFTGVIPEVSGSEPGQGSW 871
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
YH SD +V+ VSL VL +AY+LFYE++
Sbjct: 872 YHISDSHVQAVSLSRVLSSQAYLLFYERM 900
>gi|226753950|sp|Q2KJ09.2|UBP16_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|149059758|gb|EDM10641.1| ubiquitin specific peptidase 16 [Rattus norvegicus]
Length = 826
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 177/383 (46%), Gaps = 64/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + + C+DC+ K K + ++W+
Sbjct: 24 CRHLRKGLEQGNLKKALVNVEWNICQDCK-----------TDNKVKDKSEEEAEDPSVWL 72
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ I +
Sbjct: 73 CLKCGHQGCGR----DSQEQHALKHYTTPRSEPHYLVLSLDNWSV-WCYKCDEEIKYCSS 127
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
G+ D + + I + E ++ +++E+ S N KSES LD
Sbjct: 128 NRLGQVVDYVRKQAGRITSKPAEKNNGHIELENKKLEKESKNEQEREKSESMAKENIPLD 187
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 188 SASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 247
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 248 VNLEPPGPLTLAMSQFLNEMQENK--KRIVTPKELFSQVCKKATRFKGYQQQDSQELLRY 305
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 306 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEEVKNKVKDYEKKKAIPSFVDRIFGGELTST 365
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 366 IMCDDCRTVSLVHESFLDLSLPV 388
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++L++ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 VYTNAKKQMLVSLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 736
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP-----KNKV-------KAKKESVGGVW 1013
+ Y L GVVEH GTMR GHY AY + N V + ES G W
Sbjct: 737 EESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQW 796
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V + +VL +AY+LFYE+I
Sbjct: 797 FHISDTHVQAVPITKVLNSQAYLLFYERI 825
>gi|209954606|ref|NP_001093971.1| ubiquitin carboxyl-terminal hydrolase 16 [Rattus norvegicus]
Length = 825
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 179/389 (46%), Gaps = 77/389 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + + C+DC+ K K + ++W+
Sbjct: 24 CRHLRKGLEQGNLKKALVNVEWNICQDCK-----------TDNKVKDKSEEEAEDPSVWL 72
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ I +
Sbjct: 73 CLKCGHQGCGR----DSQEQHALKHYTTPRSEPHYLVLSLDNWSV-WCYKCDEEIKYCSS 127
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--------VDVEDAWFG--SGNVNSEIKSESTVV 216
+ L +VV ++ ++ I+S +++E+ S N KSES
Sbjct: 128 -------NRLGQVVDYVRKQAGRITSKPEKNNGHIELENKKLEKESKNEQEREKSESMAK 180
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------- 265
LD + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 181 ENIPLDSASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLA 240
Query: 266 ------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS 313
GPLT+A+ + E + + ++ P+ F +C KA +FKGYQQ DS
Sbjct: 241 LTEPLEVNLEPPGPLTLAMSQFLNEMQENK--KRIVTPKELFSQVCKKATRFKGYQQQDS 298
Query: 314 HELLRCLLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFG 357
ELLR LLDG+ +EE + NS + + N+ P FVD +FG
Sbjct: 299 QELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKLDEEVKNKVKDYEKKKAIPSFVDRIFG 358
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G++ ST+ C +C S V+E FLDLSLPV
Sbjct: 359 GELTSTIMCDDCRTVSLVHESFLDLSLPV 387
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++L++ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 677 VYTNAKKQMLVSLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 735
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP-----KNKV-------KAKKESVGGVW 1013
+ Y L GVVEH GTMR GHY AY + N V + ES G W
Sbjct: 736 EESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQW 795
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V + +VL +AY+LFYE+I
Sbjct: 796 FHISDTHVQAVPITKVLNSQAYLLFYERI 824
>gi|426217485|ref|XP_004002984.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Ovis
aries]
Length = 827
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 182/392 (46%), Gaps = 81/392 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H + R H LV+ +N + WC+ C+
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMKPRSEPHCLVLSLDNWSV-WCYLCDD------- 121
Query: 167 EENGENKDALSEVVKLIK---GRSTEISS------VDVEDAWFG--SGNVNSEIKSESTV 215
E N + L +VV ++ G +T S+ +++E+ S N K E+ V
Sbjct: 122 EVQYCNSNRLGQVVDYVRKQAGNTTPKSAAKDNGNIELENKKLEKESKNEQEREKKENMV 181
Query: 216 VSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF---------- 265
++ + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 182 RENPSMNSTSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDL 241
Query: 266 -------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHD 312
GPLT+A+ + E + ET + V+ PR F +C KA +FKGYQQ D
Sbjct: 242 ALTEPLEINVEPPGPLTLAMSQFLNEMQ-ETK-KGVMTPRELFSQVCKKAVRFKGYQQQD 299
Query: 313 SHELLRCLLDGLCSEEL---------AF---------RKRNSPSEGNGISSNQGPVFVDY 354
S ELLR LLDG+ +EE AF +N E S P FVD
Sbjct: 300 SQELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKVDEELKNKVKEYEKKKS--VPSFVDR 357
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+FGG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 358 IFGGELTSTIMCDECRTVSLVHESFLDLSLPV 389
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+H KRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHFKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
+H Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 738 EEHTRVLYSLYGVVEHSGTMRSGHYTAYAKTRTANTHLSNLVLHGDIPQDFEMESTKGQW 797
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 FHISDTHVQAVPTTKVLNSQAYLLFYERI 826
>gi|432117582|gb|ELK37820.1| Ubiquitin carboxyl-terminal hydrolase 16 [Myotis davidii]
Length = 752
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 179/347 (51%), Gaps = 36/347 (10%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ K K K ++ G ++ +W+
Sbjct: 24 CRHIRKGLEQSILKKALVNVEWNVCQDCK------TDNKVKDKPEEETG----ETPPVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEIS-SVDVEDAWFGSGNVN-SEIKSESTVVSGSDLDGN 224
G+ D + + +L S + + S+++E+ + N E + + + + ++
Sbjct: 129 NRLGQVVDYVRKQARLTAPESAKDNGSIELENKKLEKESKNEQEREKKENMAKETSMNYT 188
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETG 284
+ V+GL+NLGNTCFFN+VMQ L + L+ GPLT+A+ + +E + +
Sbjct: 189 SQITVKGLSNLGNTCFFNAVMQEPLEI-HLE--------PPGPLTLAMSQFLSEMQETS- 238
Query: 285 LRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGIS 344
+ ++ P+ F +C KA +FKGYQQ DS ELLR LLDG+ +EE ++ +S
Sbjct: 239 -KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGMRAEEHQVSMFHNLISLALLS 297
Query: 345 SNQG-----PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ P FVD +FGG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 298 FDYEKKKSVPSFVDRIFGGELTSTIMCDECRTVSLVHESFLDLSLPV 344
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 38/145 (26%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHD 969
V +A K++LI+ APP+LT+HLKRF Q+ +++
Sbjct: 633 VYTNAKKQMLISLAPPVLTLHLKRFQQNVAEESTRVL----------------------- 669
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVWYHAS 1017
Y L GVVEH GTMR GHY AY + N + + ES G W+H S
Sbjct: 670 ---YSLYGVVEHSGTMRSGHYTAYAKARTANSRLSDLVLRGDVPQDFEMESTKGQWFHVS 726
Query: 1018 DVYVREVSLEEVLRCEAYILFYEKI 1042
D +V+ V +VL +AY+LFYE+I
Sbjct: 727 DSHVQAVPTAKVLNSQAYLLFYERI 751
>gi|168066124|ref|XP_001784993.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663451|gb|EDQ50214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 324
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 115/187 (61%), Gaps = 26/187 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNV-- 288
GL NLGNTCFFNSVMQNL+ + L+++F G TIA + + G+ NV
Sbjct: 1 GLMNLGNTCFFNSVMQNLVGVRMLREHF-------GKETIAQEVERSIRTCSFGIGNVGS 53
Query: 289 -INPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------------N 335
++P+ F IC KAP+F+G+QQ DSHELLRCLLDGL EE + RK +
Sbjct: 54 AVSPKILFSEICKKAPRFRGFQQQDSHELLRCLLDGLHMEEESIRKAQFGMDKKVESGAD 113
Query: 336 SPSEGNGISSNQGP----VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA 391
S S+ S + P V+Y+FGGQ +STV C ECGHSS VYEPFLDLSLP+P+K++
Sbjct: 114 SNSKDEDGSLEKAPKKPDTLVEYMFGGQYSSTVTCCECGHSSVVYEPFLDLSLPIPSKQS 173
Query: 392 PSKKTQP 398
K +P
Sbjct: 174 FGKTAEP 180
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 105/143 (73%), Gaps = 7/143 (4%)
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLR 958
K+E+ +K+V VKRDATKR+LI+KAP +LT+HLKRF+QD GRLSKL GH+ F E ++L
Sbjct: 189 KLEKDVTKMVSVKRDATKRLLISKAPLVLTVHLKRFAQDTYGRLSKLGGHITFHEELDLG 248
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P++D + Y+L+G VEH GTMRGGHYVAYV+G ++ + K WY+ SD
Sbjct: 249 PFIDQSIK--QDGVYQLIGTVEHSGTMRGGHYVAYVKGESEDSTEGKS-----TWYYISD 301
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+VR+ SL++VL+ EAY+LFYE+
Sbjct: 302 SHVRKTSLDDVLQSEAYLLFYER 324
>gi|81880227|sp|Q99LG0.1|UBP16_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|13096967|gb|AAH03278.1| Ubiquitin specific peptidase 16 [Mus musculus]
gi|74213541|dbj|BAE35580.1| unnamed protein product [Mus musculus]
Length = 825
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 179/383 (46%), Gaps = 64/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + + C+DC+ K K + ++W+
Sbjct: 24 CRHLRKGLEQGNLKKALVNVEWNICQDCK-----------TDNKVKDKPEEEAEDPSVWL 72
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 73 CLKCGHQGCGR----DSQEQHALKHYTTPRSEPHYLVLSLDNWSV-WCYKCDEEVKYCSS 127
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
G+ D + + + + E ++ +++E+ S N + KSE+ +D
Sbjct: 128 NRLGQVVDYVRKQAGVRTSKPAEKNNGHIELENKKLEKESKNEQEKEKSENLAKETIPMD 187
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 188 SASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 247
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + +E + + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 248 VNLEPPGPLTLAMSQFLSEM--QENKKRVVTPKELFSQVCKKATRFKGYQQQDSQELLRY 305
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 306 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEEVKNKVKDYEKKKAIPSFVDRIFGGELTST 365
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C EC S V+E FLDLSLPV
Sbjct: 366 IMCDECRTVSLVHESFLDLSLPV 388
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++L++ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 677 VYTNAKKQMLVSLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 735
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP-----KNKV-------KAKKESVGGVW 1013
+ Y L GVVEH GTMR GHY AY + N V + ES G W
Sbjct: 736 EESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQW 795
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V + +VL +AY+LFYE+I
Sbjct: 796 FHISDTHVQAVPITKVLNSQAYLLFYERI 824
>gi|167998913|ref|XP_001752162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696557|gb|EDQ82895.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 111/178 (62%), Gaps = 18/178 (10%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA-ELTFGPLTIALKKLFAETKPE----TGL 285
GL NLGNTCFFNSVMQNL+ +S L++YF + G K A T +
Sbjct: 1 GLMNLGNTCFFNSVMQNLVGVSMLREYFSKEPSVQEGDGDDDSKSASARTMRTRSFGANV 60
Query: 286 RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN----SPSEGN 341
N ++P F IC+KAP+FKG+QQ DSHELLRCLLDGL EE + RK SP+E N
Sbjct: 61 GNAVSPTRLFSAICAKAPRFKGFQQQDSHELLRCLLDGLHMEEESARKAQLSAESPTEPN 120
Query: 342 GISSNQG--------PV-FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
G +G PV FV++VFGGQ +STV C CGHSS VYEPFLDLSLP+P+ +
Sbjct: 121 GTVKEEGSHGNPIKVPVTFVEHVFGGQFSSTVSCCVCGHSSVVYEPFLDLSLPIPSAR 178
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 119/199 (59%), Gaps = 29/199 (14%)
Query: 865 SCSVDGATSSGY-----------SAEKVYQSDSQLVAGNCESEESKVEEINSK------- 906
SC V G +S Y SA +VY + G C +K E ++ +
Sbjct: 153 SCCVCGHSSVVYEPFLDLSLPIPSAREVYTYPMMSLEG-CLQAFTKTEVLSGENAWGCEN 211
Query: 907 IVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT 966
KV+R+ATKR LI+KAP +LT+HLKRF+QD GRLSKL+GH+ F E ++L P+ D G
Sbjct: 212 CAKVERNATKRFLISKAPRVLTVHLKRFAQDLHGRLSKLSGHITFHEQLDLGPFTDKG-- 269
Query: 967 DHDNYD--YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGG--VWYHASDVYVR 1022
+D Y+L+G VEH GTMRGGHYVAYV+G + +S G WY+ SD +VR
Sbjct: 270 ----WDGVYQLIGTVEHSGTMRGGHYVAYVKGSVNYEESEADDSPKGASTWYYISDSHVR 325
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
+ SLE VL+ EAY+LFYE+
Sbjct: 326 KTSLEAVLQSEAYLLFYER 344
Score = 40.0 bits (92), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 707 VSVESCLVHFIKPELLTDDNAWDCESCSKT 736
+S+E CL F K E+L+ +NAW CE+C+K
Sbjct: 186 MSLEGCLQAFTKTEVLSGENAWGCENCAKV 215
>gi|251823802|ref|NP_077220.2| ubiquitin carboxyl-terminal hydrolase 16 [Mus musculus]
gi|148665920|gb|EDK98336.1| ubiquitin specific peptidase 16 [Mus musculus]
Length = 825
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 178/383 (46%), Gaps = 64/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + + C+DC+ K K + ++W+
Sbjct: 24 CRHLRKGLEQGNLKKALVNVEWNICQDCK-----------TDNKVKDKPEEEAEDPSVWL 72
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 73 CLKCGHQGCGR----DSQEQHALKHYTTPRSEPHYLVLSLDNWSV-WCYKCDEEVKYCSS 127
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
G+ D + + + + E ++ +++E+ S N KSE+ +D
Sbjct: 128 NRLGQVVDYVRKQAGVRTSKPAEKNNGHIELENKKLEKESKNEQEREKSENLAKETIPMD 187
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 188 SASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 247
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + +E + + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 248 VNLEPPGPLTLAMSQFLSEMQENK--KRVVTPKELFSQVCKKATRFKGYQQQDSQELLRY 305
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 306 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEEVKNKVKDYEKKKAIPSFVDRIFGGELTST 365
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C EC S V+E FLDLSLPV
Sbjct: 366 IMCDECRTVSLVHESFLDLSLPV 388
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++L++ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 677 VYTNAKKQMLVSLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 735
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP-----KNKV-------KAKKESVGGVW 1013
+ Y L GVVEH GTMR GHY AY + N V + ES G W
Sbjct: 736 EESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQW 795
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V + +VL +AY+LFYE+I
Sbjct: 796 FHISDTHVQAVPITKVLNSQAYLLFYERI 824
>gi|296491633|tpg|DAA33666.1| TPA: ubiquitin carboxyl-terminal hydrolase 16 [Bos taurus]
Length = 826
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 84/393 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H + R H LV+ +N + WC+ C+
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMKPRSEPHCLVLSLDNWSV-WCYLCDD------- 121
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKS--------------E 212
E + N + L +VV ++ ++ + ED +GN+ E K E
Sbjct: 122 EVHYCNSNRLGQVVDYVRKQAGNTTPESAED----NGNIELENKKLEKESKNEQEREKKE 177
Query: 213 STVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------- 265
+ ++ + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 178 NMARENPSMNSTSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEP 237
Query: 266 ----------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
GPLT+A+ + E + ET + ++ PR F +C KA +FKGYQ
Sbjct: 238 PDLALTEPLEINLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPRELFSQVCKKAVRFKGYQ 295
Query: 310 QHDSHELLRCLLDGLCSEELA------FRKRNSPSEG------NGISSNQG----PVFVD 353
Q DS ELLR LLDG+ +EE + ++ +E N + + P FVD
Sbjct: 296 QQDSQELLRYLLDGMRAEEHQRVSKGILKAFDNSTEKVDEELKNKVKEYEKKKSVPSFVD 355
Query: 354 YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+FGG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPV 388
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
+ +A K++LI+ APP+LT+H KRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 IYTNAKKQMLISLAPPVLTLHFKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 736
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
+H Y L GVVEH GTMR GHY AY + + + + ES G W
Sbjct: 737 EEHTRVLYSLYGVVEHSGTMRSGHYTAYAKTRTASTHLSNLVLHGDIPQDFEMESTKGQW 796
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 797 FHISDTHVQAVPTTKVLSSQAYLLFYERI 825
>gi|116003947|ref|NP_001070335.1| ubiquitin carboxyl-terminal hydrolase 16 [Bos taurus]
gi|122132196|sp|Q08DA3.1|UBP16_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|115305035|gb|AAI23862.1| Ubiquitin specific peptidase 16 [Bos taurus]
Length = 826
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 84/393 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H + R H LV+ +N + WC+ C+
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMKPRSEPHCLVLSLDNWSV-WCYLCDD------- 121
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKS--------------E 212
E + N + L +VV ++ ++ + ED +GN+ E K E
Sbjct: 122 EVHYCNSNRLGQVVDYVRKQAGNTTPESAED----NGNIELENKKLEKESKNEQEREKKE 177
Query: 213 STVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------- 265
+ ++ + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 178 NMARENPSMNSTSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEP 237
Query: 266 ----------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
GPLT+A+ + E + ET + ++ PR F +C KA +FKGYQ
Sbjct: 238 PDLALTEPLEINLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPRELFSQVCKKAVRFKGYQ 295
Query: 310 QHDSHELLRCLLDGLCSEELA------FRKRNSPSEG------NGISSNQG----PVFVD 353
Q DS ELLR LLDG+ +EE + ++ +E N + + P FVD
Sbjct: 296 QQDSQELLRYLLDGMRAEEHQRVSKGILKAFDNSTEKVDEELKNKVKEYEKKKSVPSFVD 355
Query: 354 YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+FGG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPV 388
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 84/149 (56%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
+ +A K++LI+ APP+LT+H KRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 IYTNAKKQMLISLAPPVLTLHFKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 736
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
+H Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 737 EEHTRVLYSLYGVVEHSGTMRSGHYTAYAKTRTANTHLSNLVLHGDIPQDFEMESTKGQW 796
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 797 FHISDTHVQAVPTTKVLSSQAYLLFYERI 825
>gi|440895321|gb|ELR47543.1| Ubiquitin carboxyl-terminal hydrolase 16 [Bos grunniens mutus]
Length = 826
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 181/393 (46%), Gaps = 84/393 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H + R H LV+ +N + WC+ C+
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMKPRSEPHCLVLSLDNWSV-WCYLCDD------- 121
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKS--------------E 212
E N + L +VV ++ ++ + ED +GN+ E K E
Sbjct: 122 EVQYCNSNRLGQVVDYVRKQAGSTTPESAED----NGNIELENKKLEKESKNEQEREKKE 177
Query: 213 STVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------- 265
+ ++ + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 178 NMARENPSMNSTSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEP 237
Query: 266 ----------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
GPLT+A+ + E + ET + ++ PR F +C KA +FKGYQ
Sbjct: 238 PDLALTEPLEINLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPRELFSQVCKKAVRFKGYQ 295
Query: 310 QHDSHELLRCLLDGLCSEELA------FRKRNSPSEG------NGISSNQG----PVFVD 353
Q DS ELLR LLDG+ +EE + ++ +E N + + P FVD
Sbjct: 296 QQDSQELLRYLLDGMRAEEHQRVSKGILKAFDNSTEKVDEELKNKVKEYEKKKSVPSFVD 355
Query: 354 YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+FGG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPV 388
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 84/149 (56%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
+ +A K++LI+ APP+LT+H KRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 IYTNAKKQMLISLAPPVLTLHFKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 736
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
+H Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 737 EEHTRVLYSLYGVVEHSGTMRSGHYTAYAKTRTANTHLSNLVLHGDIPQDFEMESTKGQW 796
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 797 FHISDTHVQAVPTTKVLNSQAYLLFYERI 825
>gi|426217195|ref|XP_004002839.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Ovis aries]
Length = 827
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 181/392 (46%), Gaps = 81/392 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H + R H LV+ +N + WC+ C+
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMKPRSEPHCLVLSLDNWSV-WCYLCDD------- 121
Query: 167 EENGENKDALSEVVKLIK---GRSTEISS------VDVEDAWFG--SGNVNSEIKSESTV 215
E N + L +VV ++ G +T S+ +++E+ S N K E+
Sbjct: 122 EVQYCNSNRLGQVVDYVRKQAGNTTPKSAAKDNGNIELENKKLEKESKNEQEREKKENMA 181
Query: 216 VSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF---------- 265
++ + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 182 RENPSMNSTSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDL 241
Query: 266 -------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHD 312
GPLT+A+ + E + ET + V+ PR F +C KA +FKGYQQ D
Sbjct: 242 ALTEPLEINLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPRELFSQVCKKAVRFKGYQQQD 299
Query: 313 SHELLRCLLDGLCSEEL---------AF---------RKRNSPSEGNGISSNQGPVFVDY 354
S ELLR LLDG+ +EE AF +N E S P FVD
Sbjct: 300 SQELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKVDEELKNKVKEYEKKKS--VPSFVDR 357
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+FGG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 358 IFGGELTSTIMCDECRTVSLVHESFLDLSLPV 389
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+H KRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHFKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
+H Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 738 EEHTRVLYSLYGVVEHSGTMRSGHYTAYAKTRTANTHLSNLVLHGDIPQDFEMESTKGQW 797
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 FHISDTHVQAVPTTKVLNSQAYLLFYERI 826
>gi|351700166|gb|EHB03085.1| Ubiquitin carboxyl-terminal hydrolase 16 [Heterocephalus glaber]
Length = 824
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 183/390 (46%), Gaps = 77/390 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + C+ C K K K ++ ++W+
Sbjct: 24 CRHIRKGLEEGHLRKALVDVEWNICQGC----------KMDNKVKDKSEEDTEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHA---RQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+T + +
Sbjct: 74 CLKCGHQGCG----RNSQEQHALKHYMIPRSESHCLVLSLDNWSV-WCYMCDTEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEIS---------SVDVEDAWFGSGNVNSEIKSESTVVS 217
+ L +VV IK +ST S ++++E+ + N + + + ++
Sbjct: 129 SQ-------LGQVVDYIKKQSTVTSPKLAEKDNGNIELENKKLEKESKNEQEREKKENMA 181
Query: 218 GSDLDGNAC--YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF---------- 265
+L N+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 182 KENLPMNSASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGAIIKIEPPDL 241
Query: 266 -------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHD 312
GPLT+A+ + E + ET + ++ P+ F +C KA +F+GYQQ D
Sbjct: 242 ALTESLEINLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFAQVCKKAVRFRGYQQQD 299
Query: 313 SHELLRCLLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVF 356
S ELLR LLDG+ +EE + NS + + N+ P FVD +F
Sbjct: 300 SQELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIF 359
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
GG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 360 GGELTSTIMCDECRTVSLVHESFLDLSLPV 389
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 86/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 676 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFSLRKVNKHIQFPEILDLAPFCTLKCKNVA 734
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 735 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANNHLSNLVLHGDIPQDFEMESTKGQW 794
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ VS EVL +AY+LFYE+I
Sbjct: 795 FHISDTHVQAVSTTEVLNSQAYLLFYERI 823
>gi|344277148|ref|XP_003410366.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Loxodonta
africana]
Length = 827
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 179/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHLRKGLEQSNLKKALVNVEWNICQDC----------KTDNKVKDKSEEEAEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ + + WC+ C+ + +
Sbjct: 74 CLKCGHQGCG----RDSQEQHALKHYLTPRSEPHCLVLNLDTWSV-WCYMCDDEVQYCHS 128
Query: 167 EENGENKDALSEVVKL--IKGRSTEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
G+ D + + L ++ + + ++++E+ S N K E+ ++
Sbjct: 129 NRLGQVVDYIRKQAGLTTLQSAAKDNGNIELENKKLEKESKNEQEREKKENMAKENPSMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 STSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+AL + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 VNLEPPGPLTLALSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTST 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C EC S V+E FLDLSLPV
Sbjct: 367 IMCDECRTVSLVHESFLDLSLPV 389
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKINKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 738 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESTKGQW 797
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 FHISDTHVQAVPTTKVLSSQAYLLFYERI 826
>gi|410910484|ref|XP_003968720.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Takifugu
rubripes]
Length = 825
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 183/412 (44%), Gaps = 87/412 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG D + G+S C+DC+ D K+ ++ ++ AIW+
Sbjct: 23 CRHIKKGTDQALLKKLSGNSKWTSCQDCK----DEENKENNCM--EQDCEEEQETPAIWM 76
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + H ++H H LVI +N + WC+ CN + T
Sbjct: 77 CLKCGHSGCGR----NSDNQHAIKHYETPHSDPHCLVISLDNWSV-WCYICNDEVYYSGT 131
Query: 167 EE-----------------NGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEI 209
N KD E G++TE D D +N +
Sbjct: 132 GHLAQLVDNLKKQASLYTPNTARKDVKEETSSKEAGQNTE----DHGDTADKDKKINPKK 187
Query: 210 KSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA-------- 261
+S + D ++ V+GL+NLGNTCFFN+V+QNL + +QL +NA
Sbjct: 188 ESMKKSQTYGTPDDSSGISVKGLSNLGNTCFFNAVIQNL-SQTQLLRQRINAVIKETSLN 246
Query: 262 ------------ELTF---GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFK 306
E+ GPLT+A+ +L E + ++V P+ F +C KA +FK
Sbjct: 247 IEPVACPKLDPLEVQLDKPGPLTLAMCQLLNEI--QDSKKSVATPQELFTQVCRKAARFK 304
Query: 307 GYQQHDSHELLRCLLDGLCSEELA---------------------FRKRNSPSEGNGISS 345
G+QQ DS ELLR LLDG+ +EE+ +K E NG+
Sbjct: 305 GFQQQDSQELLRYLLDGMRAEEIKRVNLGIEEALKESKKSNDEEQLKKTLKEYEKNGLPK 364
Query: 346 NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQ 397
N VDYVFGG++ ST+ C +C S + E FLDLSLPV + +A KK Q
Sbjct: 365 N----LVDYVFGGELTSTIMCQQCKTVSVITEMFLDLSLPV-SDEAYRKKNQ 411
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 16/189 (8%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPP 925
CSV E + + +S L+ C ++ E SK V DA K++LI+ PP
Sbjct: 640 CSVQSCLFQFTEVETLTEKNS-LLCVTCTKQQPDKGEGCSK--NVYTDALKQMLISSLPP 696
Query: 926 ILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD----YRLVGVVEH 981
+LT+HLKRF Q+ + K+N HV F I++L P+ C + + + Y L G+V H
Sbjct: 697 VLTLHLKRFQQNGYS-ICKVNRHVQFPLILDLAPFCGVKCKNVADGEPQILYSLYGIVVH 755
Query: 982 LGTMRGGHYVAYVR---GGPK---NKV--KAKKESVGGVWYHASDVYVREVSLEEVLRCE 1033
GTMR GHY AYV+ GPK N + +A ES G W+H SD +V+ VS V C+
Sbjct: 756 SGTMRSGHYTAYVKVRPEGPKLASNGLAGQADAESPRGKWFHISDTHVQPVSESNVQSCQ 815
Query: 1034 AYILFYEKI 1042
AY+LFYE++
Sbjct: 816 AYLLFYERV 824
>gi|345795345|ref|XP_003434023.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Canis lupus
familiaris]
Length = 811
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 178/381 (46%), Gaps = 61/381 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 10 CRHIRKGLEQGNLKRALLNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 59
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 60 CLKCGHQGCGR----DSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCSS 114
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDGN 224
G+ D + + + +S + +V++E+ S N K E+ +
Sbjct: 115 NRLGQVVDYVRKQAGITTPKSAKDGNVELENKKLEKESKNEQEREKKENMTKEIPSTNSA 174
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 175 SQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEIN 234
Query: 266 ----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR LL
Sbjct: 235 LEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLL 292
Query: 322 DGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTVR 365
DG+ +EE + NS + + N+ P FVD +FGG++ ST+
Sbjct: 293 DGMRAEEQQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTSTIM 352
Query: 366 CVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 353 CDECRTVSLVHESFLDLSLPV 373
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 17/150 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT-- 966
+V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 662 RVYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNV 720
Query: 967 --DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGV 1012
++ Y L GVVEH GTMR GHY AY + N + + +S G
Sbjct: 721 AEENTRVLYSLYGVVEHSGTMRSGHYTAYAKARAANSHLSNLVLHGDIPQDFEMQSTKGQ 780
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W+H SD +V+ V +VL +AY+LFYE++
Sbjct: 781 WFHISDTHVQAVPTTKVLNSQAYLLFYERV 810
>gi|431915238|gb|ELK15925.1| Ubiquitin carboxyl-terminal hydrolase 16 [Pteropus alecto]
Length = 743
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 183/383 (47%), Gaps = 62/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K K + + ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVK------DKTEEEAEEENPSVWL 74
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 75 CLKCGHQGCGR----NSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYLCDEEVQYCSS 129
Query: 167 EENGENKDALSEVVKLI--KGRSTEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
G+ D + + + K + + S+++E+ S N K E+ ++
Sbjct: 130 NRLGQVVDYIRKQAGIATPKSAAKDNGSIELENKKLEKESKNEQEREKKENKAKENPPMN 189
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 190 STSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 249
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 250 INLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 307
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 308 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTST 367
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C EC S V+E FLDLSLPV
Sbjct: 368 IMCDECRTVSLVHESFLDLSLPV 390
>gi|327268660|ref|XP_003219114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 2
[Anolis carolinensis]
Length = 835
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 186/407 (45%), Gaps = 76/407 (18%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + D C+DCR + D + K D +IW+
Sbjct: 24 CKHLRKGLEQGHLKKVLQNVDWGSCQDCR--ISDNGTPE-------KSEDEAEDKPSIWL 74
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 75 CLKCGHRGCGR----NSQEKHALKHYETPRSEPHCLVLNVDNWSV-WCYLCDNEVQYSTS 129
Query: 167 EENGENKDALSE-----VVKLIKGRSTE-ISSVDVEDAWFGSGNVNSEIKSESTVVSGSD 220
G+ D + + + + K T+ + + V+D E+ + +
Sbjct: 130 SRLGQLVDYVRKQTSDGAISVSKDEETKPVENKKVKDHKNEEEKEKKELLLKENKIH--- 186
Query: 221 LDGNACYVVRGLANLGNTCFFNSVMQNL---------LAMSQLQDYFLNAE--------- 262
L+G+ V+GL+NLGNTCFFN+V+QNL L ++ DY + E
Sbjct: 187 LNGHTEVTVKGLSNLGNTCFFNAVLQNLSQTPVLRELLKEVKMADYTITIEPPEFSITEP 246
Query: 263 --LTFG---PLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
+T PLT+A+ + + ET + + P+ F +C KA +FKGYQQ DS ELL
Sbjct: 247 VVITLDQPRPLTLAMCDFLTDMQ-ETK-KGTVTPKELFSQVCKKAIRFKGYQQQDSQELL 304
Query: 318 RCLLDGLCSEELA--------------------FRKRNSPSEGNGISSNQGPVFVDYVFG 357
R LLDG+ +EE+ +K+ E I+ FVD +FG
Sbjct: 305 RYLLDGMRTEEVQRICAGIFKALNNSADKENEELKKKIKEYEKRKITQ----TFVDRIFG 360
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKK 404
G++ ST+ C EC S V+E FLDLSLPV + KKT R KK
Sbjct: 361 GELTSTIMCEECQTVSLVHESFLDLSLPVLNDQGAKKKT-VEKRVKK 406
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ APPILT+HLKRF Q L K+N H+ F E+I+L P+ C +
Sbjct: 687 VYTNAKKQMLISLAPPILTLHLKRFQQTGYN-LQKVNKHIKFPEVIDLAPFCSIKCKNVA 745
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRG-GPKNKV-----------KAKKESVGGVW 1013
Y L G+VEH GTMR GHY AYV+ N++ A+ ES G W
Sbjct: 746 EGSSRVLYSLYGIVEHSGTMRSGHYTAYVKTRATTNQLSDLVLHGRIQHNAETESSKGQW 805
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD V+ V + +VL +AY+LFYE++
Sbjct: 806 FHISDTRVQAVPVSKVLNAQAYLLFYERL 834
>gi|335300577|ref|XP_003358945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 1
[Sus scrofa]
Length = 823
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 179/383 (46%), Gaps = 64/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK-----------TDNKVKDKSEEETENPSVWL 72
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 73 CLKCGHQGCGR----DSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCNS 127
Query: 167 EENGENKDALSEVVKLI--KGRSTEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
G+ D + + + K + + ++++E+ S N K E+ ++
Sbjct: 128 NRLGQVVDYVRKQAGITAPKSAAKDNGNIELENKKLEKESKNEQEREKKENKAKENPSMN 187
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 188 SASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 247
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ PR F +C KA +FKGYQQ DS ELLR
Sbjct: 248 INLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPRELFSQVCKKAVRFKGYQQQDSQELLRY 305
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 306 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTST 365
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C EC S V+E FLDLSLPV
Sbjct: 366 IMCDECRTVSLVHESFLDLSLPV 388
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 675 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 733
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 734 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSDLVLHGDIPQDFEMESTKGQW 793
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 794 FHISDTHVQAVPTTKVLNSQAYLLFYERI 822
>gi|335300579|ref|XP_003358946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 2
[Sus scrofa]
Length = 808
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 180/382 (47%), Gaps = 63/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ K K ++ ++W+
Sbjct: 10 CRHIRKGLEQGNLKKALVNVEWNICQDCK-----------TDNKVKDKSEEETENPSVWL 58
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 59 CLKCGHQGCGR----DSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCNS 113
Query: 167 EENGENKDALSEVVKLIKGRSTEIS-SVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
G+ D + + + +S + + ++++E+ S N K E+ ++
Sbjct: 114 NRLGQVVDYVRKQAGITAPKSAKDNGNIELENKKLEKESKNEQEREKKENKAKENPSMNS 173
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 174 ASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 233
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + ++ PR F +C KA +FKGYQQ DS ELLR L
Sbjct: 234 NLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPRELFSQVCKKAVRFKGYQQQDSQELLRYL 291
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ ST+
Sbjct: 292 LDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTSTI 351
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 352 MCDECRTVSLVHESFLDLSLPV 373
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 660 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 718
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 719 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSDLVLHGDIPQDFEMESTKGQW 778
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 779 FHISDTHVQAVPTTKVLNSQAYLLFYERI 807
>gi|348562863|ref|XP_003467228.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cavia
porcellus]
Length = 824
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 178/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ +IW+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KMDNKIKDKSEEETEENPSIWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHA---RQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+T + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMIPRSESHCLVLGLDNWSV-WCYVCDTEVQYCTS 128
Query: 167 EENGENKDALSEVVKLI--KGRSTEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
G+ D + + + K E ++++E+ S N K E+ S +
Sbjct: 129 GRLGQVVDYVRKQASVTTPKPAEKENGNIELENKKLEKESKNEQEREKKENMAKENSAKN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SAPQVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIIKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ P+ F +C KA +F+GYQQ DS ELLR
Sbjct: 249 INLEPPGPLTVAMSQFLNEMQ-ETK-KGIVTPKELFAQVCKKAVRFRGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTST 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C EC S V+E FLDLSLPV
Sbjct: 367 IMCDECRTVSLVHESFLDLSLPV 389
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 676 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFSLRKVNKHIKFPEILDLAPFCTLKCKNVA 734
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK------------VKAKKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 735 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANNHLSNLVLHGDIPQEFEMESTKGQW 794
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 795 FHISDTHVQAVPTTKVLNSQAYLLFYERI 823
>gi|149742213|ref|XP_001499655.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 2
[Equus caballus]
gi|149742215|ref|XP_001499642.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 1
[Equus caballus]
Length = 826
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 179/382 (46%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCTS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEIS-SVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
G+ D + + + +S + + ++++E+ S N K E+ +
Sbjct: 129 NRLGQVVDYVRKQAGITTPKSAKDNGNIELENKKLEKESKNEQEREKKENMAKENPSTNS 188
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 PSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 248
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + ++ PR F +C KA +FKGYQQ DS ELLR L
Sbjct: 249 NLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPRELFSQVCKKAVRFKGYQQQDSQELLRYL 306
Query: 321 LDGLCSEELA------FRKRNSPSEG------NGISSNQG----PVFVDYVFGGQIASTV 364
LDG+ +EE + S +E N + + P FVD +FGG++ ST+
Sbjct: 307 LDGMRAEEHQRVSKGILKAFGSSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTSTI 366
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 367 MCDECRTVSLVHESFLDLSLPV 388
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 736
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + +S G W
Sbjct: 737 EENTKVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMQSTKGQW 796
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE++
Sbjct: 797 FHISDTHVQAVPTTKVLNSQAYLLFYERV 825
>gi|296231977|ref|XP_002761381.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Callithrix
jacchus]
Length = 826
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 183/383 (47%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKSEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYICDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
++ G+ D + + + + E + +++E+ S N K E+ L+
Sbjct: 129 KQLGQVVDYVRKQAGITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPSLN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPSQLTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTST 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 738 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 797
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 HISDTHVQAVPTSKVLNSQAYLLFYERI 825
>gi|327268658|ref|XP_003219113.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 1
[Anolis carolinensis]
Length = 842
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 187/411 (45%), Gaps = 78/411 (18%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + D C+DCR + D + K D +IW+
Sbjct: 24 CKHLRKGLEQGHLKKVLQNVDWGSCQDCR--ISDNGTPE-------KSEDEAEDKPSIWL 74
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV--- 163
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ +
Sbjct: 75 CLKCGHRGCGR----NSQEKHALKHYETPRSEPHCLVLNVDNWSV-WCYLCDNEVQYSTS 129
Query: 164 -----------EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE 212
++T N +NKD V K + + + V+D E+ +
Sbjct: 130 SRLGQLVDYVRKQTCTNVQNKDGAISVSK--DEETKPVENKKVKDHKNEEEKEKKELLLK 187
Query: 213 STVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNL---------LAMSQLQDYFLNAE- 262
+ L+G+ V+GL+NLGNTCFFN+V+QNL L ++ DY + E
Sbjct: 188 ENKIH---LNGHTEVTVKGLSNLGNTCFFNAVLQNLSQTPVLRELLKEVKMADYTITIEP 244
Query: 263 ----------LTFG---PLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
+T PLT+A+ + + ET + + P+ F +C KA +FKGYQ
Sbjct: 245 PEFSITEPVVITLDQPRPLTLAMCDFLTDMQ-ETK-KGTVTPKELFSQVCKKAIRFKGYQ 302
Query: 310 QHDSHELLRCLLDGLCSEELA------FRKRNSPSEGNGISSNQG----------PVFVD 353
Q DS ELLR LLDG+ +EE+ F+ N+ ++ + FVD
Sbjct: 303 QQDSQELLRYLLDGMRTEEVQRICAGIFKALNNSADKENEELKKKIKEYEKRKITQTFVD 362
Query: 354 YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKK 404
+FGG++ ST+ C EC S V+E FLDLSLPV + KKT R KK
Sbjct: 363 RIFGGELTSTIMCEECQTVSLVHESFLDLSLPVLNDQGAKKKT-VEKRVKK 412
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 18/150 (12%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ APPILT+HLKRF Q L K+N H+ F E+I+L P+ C +
Sbjct: 693 VYTNAKKQMLISLAPPILTLHLKRFQQTGYN-LQKVNKHIKFPEVIDLAPFCSIKCKNVA 751
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVR-------------GGPKNKVKAKKESVGGV 1012
Y L G+VEH GTMR GHY AYV+ G A+ ES G
Sbjct: 752 EGSSRVLYSLYGIVEHSGTMRSGHYTAYVKTRATTNQLSDLVLHGRIQHTDAETESSKGQ 811
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W+H SD V+ V + +VL +AY+LFYE++
Sbjct: 812 WFHISDTRVQAVPVSKVLNAQAYLLFYERL 841
>gi|338720701|ref|XP_003364228.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Equus
caballus]
Length = 812
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 179/382 (46%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 10 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 59
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 60 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCTS 114
Query: 167 EENGENKDALSEVVKLIKGRSTEIS-SVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
G+ D + + + +S + + ++++E+ S N K E+ +
Sbjct: 115 NRLGQVVDYVRKQAGITTPKSAKDNGNIELENKKLEKESKNEQEREKKENMAKENPSTNS 174
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 175 PSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 234
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + ++ PR F +C KA +FKGYQQ DS ELLR L
Sbjct: 235 NLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPRELFSQVCKKAVRFKGYQQQDSQELLRYL 292
Query: 321 LDGLCSEELA------FRKRNSPSEG------NGISSNQG----PVFVDYVFGGQIASTV 364
LDG+ +EE + S +E N + + P FVD +FGG++ ST+
Sbjct: 293 LDGMRAEEHQRVSKGILKAFGSSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTSTI 352
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 353 MCDECRTVSLVHESFLDLSLPV 374
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 664 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 722
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + +S G W
Sbjct: 723 EENTKVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMQSTKGQW 782
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE++
Sbjct: 783 FHISDTHVQAVPTTKVLNSQAYLLFYERV 811
>gi|440804538|gb|ELR25415.1| ubiquitin specific peptidase 16, putative [Acanthamoeba castellanii
str. Neff]
Length = 979
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 181/436 (41%), Gaps = 100/436 (22%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
CPH + + + GSS C+ C +G R G K KG KK + +W+
Sbjct: 39 CPHASQASAAHVERILAGSSAAPACQVCAKGT--RVGNK-KGAGHKKAATRSAGKPEVWL 95
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLR-WCFPCNTLIPVEKTEE 168
CL CG +CG ++H + H T HPL + HL WC+ C+ +P+ ++
Sbjct: 96 CLRCGLVSCGRYD-----EAHALGHFEMTHHPLALSLT--HLNAWCYECDQEVPMTASKA 148
Query: 169 N------------GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVV 216
GE ++ S G + + + + SG S ++ES +V
Sbjct: 149 VKECVRAARRALLGETHESNSSSDDDADGYNDDDDEAEGQHKSKHSGAAISAAETESWLV 208
Query: 217 SGSDLD-----------GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
+ +A ++GL NLGNTCFFNS+MQ L L++Y
Sbjct: 209 KDKKRNRGLVEETNPAIDSAGTGLKGLKNLGNTCFFNSIMQCLTHTPALREYLSTGRFPS 268
Query: 259 ---------------------------LNAELTFGPLTIALKKLFAETKPETGLRNVINP 291
L+A + GP+T AL+ A G +NP
Sbjct: 269 ARTDRRRGGSDDDEEEAAELSVVEAIALHAPPSEGPITQALRGFMAAMWAPKGA--CVNP 326
Query: 292 RSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELA--------------------- 330
++ F I SKA QF+ Y+Q D+ ELLR LLDG+ +EE+A
Sbjct: 327 QTLFSAIASKAVQFRSYRQQDAQELLRYLLDGVRTEEIARLAPPPRAGKAEPQQQQARQQ 386
Query: 331 ----FRKRNSPSEGNGISSNQGP-----VFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
R R SP G ++ P F+D +FGG + STV C C S EPFLD
Sbjct: 387 KAAATRPRESPQAAAGPTTTAKPGPPPPTFIDVLFGGVLESTVTCHACHSVSKTREPFLD 446
Query: 382 LSLPVPTKKAPSKKTQ 397
LS+P+P + P K+ Q
Sbjct: 447 LSVPLPAECYPDKRRQ 462
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 78/129 (60%), Gaps = 11/129 (8%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDY 973
ATK++LI++ PPILTIH+KRF Q A G LSK H F ++++ P++ P + Y Y
Sbjct: 849 ATKQLLIHQLPPILTIHVKRFRQTAHGGLSKAGEHAKFPLVLSMAPFVVPQQQEEQQYVY 908
Query: 974 RLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCE 1033
RL G+ H G + GGHY+A V + + WYH SD REVSL EVL E
Sbjct: 909 RLYGLSVHQGGIGGGHYIARVYAHTQRR-----------WYHYSDSSGREVSLNEVLGSE 957
Query: 1034 AYILFYEKI 1042
AY+LFYE++
Sbjct: 958 AYVLFYERV 966
>gi|301771482|ref|XP_002921165.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Ailuropoda melanoleuca]
Length = 824
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 182/381 (47%), Gaps = 61/381 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKRALLNVEWNICQDC----------KTDNKVKDKSEEEAEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----DSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRS-TEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
G+ D + + + +S T+ +V++E+ N + + + ++ + N+
Sbjct: 129 NRLGQVVDYVRKQAGITTPKSATKDGNVELENKKLEKETKNEQEREKKENMTKENPSTNS 188
Query: 226 CYV-VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEIN 248
Query: 266 ----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR LL
Sbjct: 249 LEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLL 306
Query: 322 DGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTVR 365
DG+ +EE + NS + + N+ P FVD +FGG++ ST+
Sbjct: 307 DGMRAEEQQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTSTIM 366
Query: 366 CVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 367 CDECRTVSLVHESFLDLSLPV 387
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 676 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 734
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + +S G W
Sbjct: 735 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARAANSHLSNLVLHGDIPQDFEMQSTKGQW 794
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE++
Sbjct: 795 FHISDTHVQPVPTAKVLNSQAYLLFYERV 823
>gi|281345917|gb|EFB21501.1| hypothetical protein PANDA_010009 [Ailuropoda melanoleuca]
Length = 805
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 182/381 (47%), Gaps = 61/381 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 5 CRHIRKGLEQGNLKRALLNVEWNICQDC----------KTDNKVKDKSEEEAEENPSVWL 54
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 55 CLKCGHQGCGR----DSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCSS 109
Query: 167 EENGENKDALSEVVKLIKGRS-TEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
G+ D + + + +S T+ +V++E+ N + + + ++ + N+
Sbjct: 110 NRLGQVVDYVRKQAGITTPKSATKDGNVELENKKLEKETKNEQEREKKENMTKENPSTNS 169
Query: 226 CYV-VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 170 SQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEIN 229
Query: 266 ----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR LL
Sbjct: 230 LEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLL 287
Query: 322 DGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTVR 365
DG+ +EE + NS + + N+ P FVD +FGG++ ST+
Sbjct: 288 DGMRAEEQQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTSTIM 347
Query: 366 CVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 348 CDECRTVSLVHESFLDLSLPV 368
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 657 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 715
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + +S G W
Sbjct: 716 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARAANSHLSNLVLHGDIPQDFEMQSTKGQW 775
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE++
Sbjct: 776 FHISDTHVQPVPTAKVLNSQAYLLFYERV 804
>gi|403271836|ref|XP_003927810.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Saimiri
boliviensis boliviensis]
Length = 619
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 10 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKSEEETEEKPS-------VWL 59
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 60 CLKCGHQGCGR----NSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYICDNEVQYRSS 114
Query: 167 EENGENKDALSEVVKLIKGRSTEI--SSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E ++++E+ S N K E+ ++
Sbjct: 115 NQLGQVVDYVRKQAGITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPSVN 174
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 175 SPSQLTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 234
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 235 INLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 292
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 293 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTST 352
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 353 IMCDQCRTVSLVHESFLDLSLPV 375
Score = 112 bits (281), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 472 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 530
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N+ + G G W+
Sbjct: 531 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANRHLSNLVLHGDIPQDFEMESKGQWF 590
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 591 HISDTHVQAVPTSKVLNSQAYLLFYERI 618
>gi|348525452|ref|XP_003450236.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Oreochromis niloticus]
Length = 841
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 188/423 (44%), Gaps = 100/423 (23%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG D + G+SD C+DC++ K+ H ++ ++ +W+
Sbjct: 24 CRHIKKGTDQTLLKKLSGNSDWTSCQDCKQ----EENKENINNHLPQEAEEEQET-GLWM 78
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + H ++H R H LV+ +N + WC+ C+ + +T
Sbjct: 79 CLKCGHRGCG----RNSENQHAIKHYETPRSDPHCLVVSLDNFSV-WCYICDDEVHYSRT 133
Query: 167 EENGENKDALSEVVKLIKGRSTEIS------SVDVEDAWFGSGNVNSEIKSESTVVSGSD 220
L+++V +K +++ S V ED + +K + +
Sbjct: 134 -------GHLAQLVTNLKKQTSSDSIKRPQKRVKEEDVLMEAKQKTETLKEDENEDKENK 186
Query: 221 LDGN----------------------ACYV-VRGLANLGNTCFFNSVMQNLLAMSQLQDY 257
+G+ C V V+GL+NLGNTCFFN+V+QNL + +QL
Sbjct: 187 ENGDHQKKNTKKEAVGKSQKKSTTEERCGVSVKGLSNLGNTCFFNAVIQNL-SQTQLLRQ 245
Query: 258 FLN-------------AELTFGP----------LTIALKKLFAETKPETGLRNVINPRSF 294
LN A L P LT+A+ L E + ++V+ PR
Sbjct: 246 TLNKVTEEKSLNIKPGASLDLEPIEVQLDRPGSLTLAMYHLLCEIQESK--KSVVTPREL 303
Query: 295 FGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEEL---------AFRKRNSPSEG----- 340
F +C KA +FKG+QQ DS ELLR LLDG+ +EE ++ ++G
Sbjct: 304 FTQVCRKAARFKGFQQQDSQELLRYLLDGMRAEEHNRISSGIMDTLKQSREGTDGELKTL 363
Query: 341 ------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK 394
NG N FVD VFGG+I ST+ C +C S V E FLDLSLPV + +A K
Sbjct: 364 LKEYEKNGFLKN----FVDQVFGGEITSTIMCQQCRTVSVVTEMFLDLSLPV-SDEAYRK 418
Query: 395 KTQ 397
K Q
Sbjct: 419 KNQ 421
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 913 DATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD----H 968
DA K++LI+ P +LT+HLKRF Q+ + K+N HV F I++L P+ C + H
Sbjct: 701 DALKQILISSPPSVLTLHLKRFQQNGYS-ICKVNRHVTFPFILDLAPFCAVKCKNIPEGH 759
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPK-------NKVKAKKESVGGVWYHASDVYV 1021
+ Y L G+VEH GTMR GHY AYV+ P+ ES G W+H SD V
Sbjct: 760 NQILYGLYGIVEHSGTMRSGHYTAYVKVRPECPQPSSNGLTDGDAESPRGSWFHISDTSV 819
Query: 1022 REVSLEEVLRCEAYILFYEKI 1042
+ VS +V C+AY+LFYE++
Sbjct: 820 QPVSESKVQSCQAYLLFYERL 840
>gi|47221077|emb|CAG12771.1| unnamed protein product [Tetraodon nigroviridis]
Length = 809
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 173/389 (44%), Gaps = 75/389 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG D + G+S+ C+DCR + K+G ++ ++ +W+
Sbjct: 24 CRHIKKGTDQTLLKKLSGNSNWTSCQDCR----NEEKKEGTSTCMQQGCGEEQETPGLWM 79
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H H LVI ++ + WC+ C+ + +T
Sbjct: 80 CLKCGHSGCGR----NSEKQHAIQHYETPHSDPHCLVISLDSWSV-WCYICDEEVQYSRT 134
Query: 167 EENGE-----NKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDL 221
+ K A+ KG +E D D +K T V+ D
Sbjct: 135 GHLAQLVTNLKKQAILYTTNPAKGEDSE----DNPDKNKKKNAKKETMKKSQTYVTPED- 189
Query: 222 DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT----------------- 264
+ V+GL+NLGNTCFFN+V+QNL + +QL LN +
Sbjct: 190 --GSTVSVKGLSNLGNTCFFNAVIQNL-SQTQLLRQNLNVVIKDTSLSIKPDACLNLDPL 246
Query: 265 ------FGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
GPLT+A+ +L E + + V+ P+ F +C KA +FKG+QQ DS ELLR
Sbjct: 247 EVQLDKSGPLTLAMCQLLNEMRDSK--KGVVTPQQLFTQVCKKAARFKGFQQQDSQELLR 304
Query: 319 CLLDGLCSEELA---------------------FRKRNSPSEGNGISSNQGPVFVDYVFG 357
LLD + +EE+ +K E +G+ N VD VFG
Sbjct: 305 YLLDAVRAEEIKRVSLGIREAVKESKKITDEEQLKKSLKEYEKSGLPKN----IVDSVFG 360
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G++ ST+ C +C S V E FLDLSLPV
Sbjct: 361 GELTSTIMCQQCKTVSVVTEMFLDLSLPV 389
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 13/185 (7%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPP 925
CSV E + Q++S L+ C ++ K ++ + + DA K++LI+ PP
Sbjct: 629 CSVHSCLFRFTEVETLTQNNS-LLCVTCTQQQPKKDKGSKNVYT---DALKQMLISSLPP 684
Query: 926 ILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD----YRLVGVVEH 981
+LT+HLKRF Q+ + K+N HV F I++L P+ C + + + Y L G+VEH
Sbjct: 685 VLTLHLKRFQQNGFS-ICKVNRHVQFPLILDLAPFCGVKCKNVADGEPQALYSLYGIVEH 743
Query: 982 LGTMRGGHYVAYVRGGPKNKVKAKK----ESVGGVWYHASDVYVREVSLEEVLRCEAYIL 1037
GTMR GHY AYV+ P+ A E G WYH SD V+ VS +V C+AY+L
Sbjct: 744 SGTMRSGHYTAYVKVRPEGPKLASNGQDVEPPRGSWYHISDTSVQPVSESKVQSCQAYLL 803
Query: 1038 FYEKI 1042
FYE++
Sbjct: 804 FYERM 808
>gi|395518530|ref|XP_003763413.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Sarcophilus
harrisii]
Length = 828
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 186/405 (45%), Gaps = 73/405 (18%)
Query: 32 KPVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKG 91
KPV S DD +++ C H+ KG++ ++K + + C+E D R K
Sbjct: 9 KPVLS-DDAAEILEHL--CRHIRKGVEQS--NLKKSLMNVCQWNVCQECKTDNRTK---- 59
Query: 92 KHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWEN 148
K +G +S +IW+CL CGH CG + + H ++H R H LV+ N
Sbjct: 60 --DKPEGDD-EESPSIWMCLKCGHQGCGR----DSEEQHALKHYTTPRSEPHCLVLSLYN 112
Query: 149 PHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGR-------STEISSVDVEDAWFG 201
+ WC+ C + + G+ D + + + R TEI + +E
Sbjct: 113 WSV-WCYLCEEEVQYSSSSRLGQLVDYIRKQTNVKTPRPALKDQGKTEIENKKLEK---D 168
Query: 202 SGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNL---LAMSQLQ--- 255
S N K E+ S L+ V+GL+NLGNTCFFN+VMQNL L + +L
Sbjct: 169 SKNELEREKKENMTKENSPLNSAIQVTVKGLSNLGNTCFFNAVMQNLSQTLVLRELLKEV 228
Query: 256 ------------DYFLNAELTF-----GPLTIALKKLFAETKPETGLRNVINPRSFFGCI 298
D L L GPLT+A+ + E ET R ++ P+ F +
Sbjct: 229 KMSGTIMKIEPPDLSLTEPLEINLEPPGPLTLAMCQFLNEMH-ETK-RGIVTPKELFSQV 286
Query: 299 CSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQG---------- 348
C KA +FKG QQ DS ELLR LLDG+ +EE+ R + G SS +
Sbjct: 287 CKKAVRFKGSQQQDSQELLRYLLDGMRAEEIQ-RVSTGILKALGNSSEKLDEELKKKIKE 345
Query: 349 -------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P FVD +FGG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 346 HEKKKTIPSFVDRIFGGELTSTIMCEECKTVSLVHESFLDLSLPV 390
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ APPILT+HLKRF Q A L K+N H+ F ++I+L P+ C +
Sbjct: 677 VYTNAKKQMLISLAPPILTLHLKRFQQ-AGLNLCKVNKHIKFPDVIDLAPFCTIKCKNVA 735
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK------------VKAKKESVGGVW 1013
+ Y L G+VEH GTMR GHY AYV+ N + + ES G W
Sbjct: 736 EGNTKVLYSLYGIVEHSGTMRRGHYTAYVKTRTSNSHLYNLVLDGSSPQEFENESTKGQW 795
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 796 FHISDTHVQAVPATKVLNSQAYLLFYERI 824
>gi|226755951|sp|Q4R6X7.2|UBP16_MACFA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
Length = 826
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYICDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E + +++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTST 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 738 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 797
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 HISDTHVQAVPTTKVLNSQAYLLFYERI 825
>gi|449283831|gb|EMC90425.1| Ubiquitin carboxyl-terminal hydrolase 16 [Columba livia]
Length = 816
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 182/389 (46%), Gaps = 77/389 (19%)
Query: 50 CPHLDKGIDSDKIS-VKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIW 108
C H+ KG++ + + + C+DC K K +K +S +IW
Sbjct: 15 CKHIRKGLEQGHLKKALLNVVEWHVCQDC----------KADNKTEEKSEEETDESPSIW 64
Query: 109 VCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEK 165
+CL CGH CG +P+ H ++H R H LV+ +N + WC+ C+ +
Sbjct: 65 LCLKCGHRGCGR----NSPEGHALKHYTTPRSDPHCLVLSLDNWSV-WCYICDNEVFYNT 119
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSES---TVVSGSDLD 222
+ G+ D V K + S+ E+ + V + K+E ++ +
Sbjct: 120 STRLGQTVDY---VRKQVGADSSHTVDKQQENKELENKKVEKDSKNEQEKEVLLKEENSR 176
Query: 223 GNACY--VVRGLANLGNTCFFNSVMQNL----LAMSQLQD--------------YFLNAE 262
+A V+GL+NLGNTCFFN+VMQNL + M L++ F+ +
Sbjct: 177 SSASLEVTVKGLSNLGNTCFFNAVMQNLSQTPVLMELLKEAKMPGTTVKIDSPELFMEPQ 236
Query: 263 LTF----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
L GPLT+A+ + E + ET R V+ P+ F +C KA +FKGYQQ DSHELLR
Sbjct: 237 LIKLDQPGPLTLAMYQFLTEMQ-ETK-RGVVTPKELFAQVCKKAIRFKGYQQQDSHELLR 294
Query: 319 CLLDGLCSEEL---------AFRKRNSPS------------EGNGISSNQGPVFVDYVFG 357
LLDG+ +EE+ A N S + GI S FVD +FG
Sbjct: 295 YLLDGMRAEEIQQISVGILKALTDSNKQSEEELKKKIKEYEKKKGIQS-----FVDRLFG 349
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G++ ST+ C +C S V+E FLDLSLPV
Sbjct: 350 GELTSTIMCEDCRTVSLVHESFLDLSLPV 378
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
+ +A K++LI+ APPILT+HLKRF Q A L K+N H+ F E+I+L P+ C +
Sbjct: 668 IYTNAKKQMLISLAPPILTLHLKRF-QQAGFNLRKVNRHIKFPEVIDLAPFCTTKCKNVP 726
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
+ Y L GVVEH GTMR GHY AY + N + + E V G W
Sbjct: 727 EGNTKVLYSLYGVVEHSGTMRSGHYTAYAKMRSMNSHLSDLVLRGQCPQALETEPVKGQW 786
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ VS +VL +AY+LFYE++
Sbjct: 787 FHISDTHVQAVSASKVLSSQAYLLFYERL 815
>gi|432891546|ref|XP_004075577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Oryzias
latipes]
Length = 830
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 186/410 (45%), Gaps = 78/410 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ D + G SD C+DC+ D ++ + + G IW+
Sbjct: 25 CRHIKTAADQSLLKKLPGISDWTNCQDCKHE-DDTTLQQDSEEEKEPAG--------IWM 75
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHA---RQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + H ++H R + H LVI +N + WC+ C+ + +T
Sbjct: 76 CLTCGHRGCGR----HSENQHAIKHYETPRSSPHCLVISLDNWSV-WCYICDDDVQYSRT 130
Query: 167 ------EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSD 220
N + ++A + K E S +D ++ + SE K S+ +
Sbjct: 131 GYLAQLVTNIKKQNAADPAKRPEKRVKDEASVLDYKENSETANTEESENKENSSTRYKNK 190
Query: 221 ---------------LDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----- 260
++G+ V+GL+NLGNTCFFN+V+QNL + +QL LN
Sbjct: 191 NNMKESAGKTQNCITIEGSTVIPVKGLSNLGNTCFFNAVIQNL-SQTQLLRETLNKVTGE 249
Query: 261 --------AELTFGPLTIALKKLFAETKPETGLRN--------VINPRSFFGCICSKAPQ 304
A L P+ + L++ + T L N V+ PR F +C KA +
Sbjct: 250 KLNLDIKPASLDLEPIVVNLEQPGSLTWAMCHLLNEIQLSKKSVVTPRELFTQVCKKAAR 309
Query: 305 FKGYQQHDSHELLRCLLDGLCSEEL---------AFRKRNSPSEGNGISS-------NQG 348
FKG+QQ DS ELLR LLDG+ +EE A + N+ +G+G+ + N
Sbjct: 310 FKGFQQQDSQELLRYLLDGMRAEEQKRVNTGIMEALKLTNTDKDGDGLKTLAKEYEKNGL 369
Query: 349 PV-FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQ 397
P FVD VFGG++ ST+ C +C S V E FLDLSLPV +A KK Q
Sbjct: 370 PKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPV-VDEAYRKKNQ 418
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 85/143 (59%), Gaps = 12/143 (8%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHD 969
V DA K++L++ P +LT+HLKRF Q+ + K+N +V+F ++L PY C +
Sbjct: 689 VYTDALKQMLVSSPPAVLTLHLKRFQQNGYT-ICKVNRYVHFPLTLDLAPYCAAKCKTNI 747
Query: 970 NYD----YRLVGVVEHLGTMRGGHYVAYVRGGPK------NKVKAKKESVGGVWYHASDV 1019
D Y L GVVEH GTMR GHY AYV+ P N + ++ S+G W+H SD
Sbjct: 748 VKDTGVLYSLYGVVEHSGTMRSGHYTAYVKVRPNHHKTLSNGLSTEEPSIGS-WFHISDT 806
Query: 1020 YVREVSLEEVLRCEAYILFYEKI 1042
V+ VS +V C+AY+LFYE++
Sbjct: 807 NVQPVSESKVQSCQAYLLFYERV 829
>gi|386781790|ref|NP_001247928.1| ubiquitin carboxyl-terminal hydrolase 16 [Macaca mulatta]
gi|402862546|ref|XP_003895616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Papio anubis]
gi|402862548|ref|XP_003895617.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2
[Papio anubis]
gi|380808856|gb|AFE76303.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Macaca mulatta]
gi|380808858|gb|AFE76304.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Macaca mulatta]
gi|383415221|gb|AFH30824.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Macaca mulatta]
gi|384944832|gb|AFI36021.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Macaca mulatta]
Length = 826
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYICDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEI--SSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQAGITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTST 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 738 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 797
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 HISDTHVQAVPTTKVLNSQAYLLFYERI 825
>gi|391343538|ref|XP_003746066.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Metaseiulus occidentalis]
Length = 852
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 193/414 (46%), Gaps = 86/414 (20%)
Query: 51 PHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDS-----K 105
PHL K + +++ D +C+DC + DR + + + K G+ L + +
Sbjct: 36 PHLRKAANGGELA------DMTKCKDCDKEENDR---EKEVEEEKPNGADLPEDIQNTMQ 86
Query: 106 AIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIP 162
AIWVCL C + C TP H RH + R H + + + + WC+ CN I
Sbjct: 87 AIWVCLQCANRGCSRY----TPHRHAERHQNKPRSDSHDVAVNIASWQV-WCYRCNDYIN 141
Query: 163 VEKTE---------ENGENKDALSEVVKLIKGRSTE-ISSVDVEDAWFGS--GNVNSEIK 210
+T+ +N + K S+ VK + T+ ++ D + S G SE K
Sbjct: 142 PAQTKSLAQAIQMLQNLQAKPDKSKSVKAFQQAPTQQANAADGQPNTLASDPGTSASE-K 200
Query: 211 SESTVVSG-------SDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA-- 261
+ V+ G + LD +GL+NLGNTCFFNSVMQNL L D L A
Sbjct: 201 TVPDVIGGVRIRVLETQLDN--LRKPKGLSNLGNTCFFNSVMQNLAQTHLLTDACLAAVK 258
Query: 262 -----------ELTFGP---LTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKG 307
EL G LT+AL + F E G + V +P S F +C K+PQF+G
Sbjct: 259 DDKQWTDMKTLELALGEPGELTLALAEFFKEFL--YGSKEVFSPGSLFHEVCVKSPQFRG 316
Query: 308 YQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGP------------------ 349
YQQ DS ELLR L +G+ +EE + R +++ G+ + P
Sbjct: 317 YQQQDSQELLRHLFEGVFNEE-SKRMKSAILAKFGLKKSVAPESVKPHIKQQIDSYKKQT 375
Query: 350 --VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV--PTKK-APSKKTQP 398
F++ VFGG + +T+ C++C SS +EPF+DLSLP+ P KK P +K P
Sbjct: 376 HHTFLETVFGGLLINTILCLQCRKSSQNFEPFVDLSLPIVAPKKKIVPQRKPDP 429
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 808 NQDCAEVESGL----TNDVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDE 863
N++ +E++SG+ +D + Q+ K K + RS C S E++ D
Sbjct: 555 NENQSEIDSGVGSICPDDEEDELIQKHKDVWKELSLSTLGDRSHC----TSSEALGPADH 610
Query: 864 GSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKA 923
S A ++ +V ++ +C E K + N K +V +A +VL+
Sbjct: 611 SVVSCLAA----FTDLEVLSGKNKFGCDHCTEEHGKPGK-NGKKERVYTNAQMQVLVLIP 665
Query: 924 PPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YRLV 976
P +LT+HLKRF Q RLSK + V+F ++++L PY C + + Y L
Sbjct: 666 PAVLTLHLKRFIQYG-FRLSKNSVQVSFPKVLDLAPYCSKACINLPSMKPGQTKILYSLY 724
Query: 977 GVVEHLGTMRGGHYVAYVRGGPKNKVKAK 1005
G+V+H G + GGHYVAYV+ P K K
Sbjct: 725 GIVKHDGGLHGGHYVAYVKVRPNTKAGEK 753
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WYH SD VR V VL EAY+LFYE++
Sbjct: 820 GRWYHISDSSVRIVPESAVLNAEAYLLFYERL 851
>gi|66821617|ref|XP_644261.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60472043|gb|EAL69996.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1258
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 116/193 (60%), Gaps = 22/193 (11%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL------NAEL-TFGPLTIALKKLFAETKP 281
++GL NLGNTCFFNS+MQNL ++ L+D FL N+++ + GPLT+ + F +
Sbjct: 159 IKGLDNLGNTCFFNSIMQNLTHLNILRDLFLREPGSTNSKIHSSGPLTMEMYYFFNKMYK 218
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
R I+P F I K+P+F+G++Q DSHELLR LLDGL +EE KR
Sbjct: 219 SKQPR--ISPSGLFSEIARKSPRFRGFKQQDSHELLRYLLDGLITEEQNVTKRR------ 270
Query: 342 GISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT--KKAPSKKTQPA 399
+ P ++D VFGGQ+ S + C CG+ S YEPFLDLSLP+P+ +++ S K + +
Sbjct: 271 -----KDPTYIDKVFGGQLISIIVCFRCGYHSKTYEPFLDLSLPIPSGNEQSLSGKQKGS 325
Query: 400 SRAKKTKLPPKKS 412
+ PP++S
Sbjct: 326 FVMPRIATPPQQS 338
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
N+ Y+L G+VEH+G+M GHYVAY+ + WY+ SD VR SL V
Sbjct: 1067 NHKYKLNGIVEHMGSMGSGHYVAYIY-----------DDFNDQWYYISDSVVRSSSLSTV 1115
Query: 1030 LRCEAYILFYEK 1041
E Y+LFY K
Sbjct: 1116 TSNEPYLLFYRK 1127
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMD 962
K +R+A+K+ L++ PP LTI LKRF Q G K + ++F ++L P+ D
Sbjct: 930 KFRRNASKQYLLSSTPPYLTIQLKRFMQTRLG-FQKNSKRIDFPSFLDLTPFTD 982
>gi|395849021|ref|XP_003797135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Otolemur garnettii]
gi|395849023|ref|XP_003797136.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2
[Otolemur garnettii]
Length = 827
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 181/383 (47%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMTLRSEPHCLVLSLDNWSV-WCYLCDCEVQYGSS 128
Query: 167 EENGENKDALSEVVKLI--KGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGN 224
G+ D + + + K + ++++E+ + N + + + ++ + GN
Sbjct: 129 SRLGQVVDYIRKQASVTTPKPVDKDNGNIELENKKSEKESKNEQEREKKENMAKENAPGN 188
Query: 225 AC--YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 STSQISVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKAIPSFVDRIFGGELTST 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C EC S V+E FLDLSLPV
Sbjct: 367 IMCDECRTVSLVHESFLDLSLPV 389
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 738 EENTKVMYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDVPQDFEMESTKGQW 797
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 FHISDTHVQAVPATKVLNSQAYLLFYERI 826
>gi|332229374|ref|XP_003263865.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Nomascus leucogenys]
Length = 826
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 182/383 (47%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYICDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E + +++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQAGITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPVN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTST 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 738 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 797
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 HISDTHVQAVPTTKVLNSQAYLLFYERI 825
>gi|410970128|ref|XP_003991541.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 16 [Felis catus]
Length = 826
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 178/382 (46%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKRALLNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----DSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRST-EISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
G+ D + + + +S + ++++E+ S N K E+ +
Sbjct: 129 NRLGQVVDYVRKQAGITTPKSAAKDGNIELENXKLEKESKNEQEREKKENLAKENPSTNS 188
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 ASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 248
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 249 NLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYL 306
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ ST+
Sbjct: 307 LDGMRAEEQQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTSTI 366
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 367 MCDECRTVSLVHESFLDLSLPV 388
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 736
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + +S G W
Sbjct: 737 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARAANSHLSNLVLHGDIPQDFEMQSTKGQW 796
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE++
Sbjct: 797 FHISDTHVQAVPTTKVLNSQAYLLFYERV 825
>gi|291400943|ref|XP_002716825.1| PREDICTED: ubiquitin specific protease 16 [Oryctolagus cuniculus]
Length = 826
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 179/382 (46%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQSNLKRALVDVEWNICQDC----------KMDNKLKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----DSKEQHALKHYMTPRSEPHCLVLNLDNWSV-WCYICDDEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGR-STEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
G+ D + + + + + S+++E+ + N + + + + +L N+
Sbjct: 129 NRLGQAVDYVRKQSGIPAPKPEKDNGSIELENKKLEKESKNEQEREKKENMPKENLPMNS 188
Query: 226 C--YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 ASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 248
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 249 NLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYL 306
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ ST+
Sbjct: 307 LDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTSTI 366
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 367 MCDECRTVSLVHESFLDLSLPV 388
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 736
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + +S G W
Sbjct: 737 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQGLEMQSTKGQW 796
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 797 FHISDTHVQAVPTTKVLNSQAYLLFYERI 825
>gi|74001074|ref|XP_848330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2
[Canis lupus familiaris]
Length = 826
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 178/382 (46%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKRALLNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----DSQEQHALKHYMTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRST-EISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
G+ D + + + +S + +V++E+ S N K E+ +
Sbjct: 129 NRLGQVVDYVRKQAGITTPKSAAKDGNVELENKKLEKESKNEQEREKKENMTKEIPSTNS 188
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 ASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 248
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 249 NLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYL 306
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ ST+
Sbjct: 307 LDGMRAEEQQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTSTI 366
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 367 MCDECRTVSLVHESFLDLSLPV 388
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 17/150 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT-- 966
+V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 677 RVYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNV 735
Query: 967 --DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGV 1012
++ Y L GVVEH GTMR GHY AY + N + + +S G
Sbjct: 736 AEENTRVLYSLYGVVEHSGTMRSGHYTAYAKARAANSHLSNLVLHGDIPQDFEMQSTKGQ 795
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W+H SD +V+ V +VL +AY+LFYE++
Sbjct: 796 WFHISDTHVQAVPTTKVLNSQAYLLFYERV 825
>gi|395849025|ref|XP_003797137.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 3
[Otolemur garnettii]
Length = 812
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 181/382 (47%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 10 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 59
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 60 CLKCGHQGCGR----NSQEQHALKHYMTLRSEPHCLVLSLDNWSV-WCYLCDCEVQYGSS 114
Query: 167 EENGENKDALSEVVKLIKGR-STEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
G+ D + + + + + ++++E+ + N + + + ++ + GN+
Sbjct: 115 SRLGQVVDYIRKQASVTTPKPDKDNGNIELENKKSEKESKNEQEREKKENMAKENAPGNS 174
Query: 226 C--YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 175 TSQISVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 234
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 235 NLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYL 292
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ ST+
Sbjct: 293 LDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKAIPSFVDRIFGGELTSTI 352
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC S V+E FLDLSLPV
Sbjct: 353 MCDECRTVSLVHESFLDLSLPV 374
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 664 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 722
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 723 EENTKVMYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDVPQDFEMESTKGQW 782
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 783 FHISDTHVQAVPATKVLNSQAYLLFYERI 811
>gi|62896921|dbj|BAD96401.1| ubiquitin specific protease 16 isoform a variant [Homo sapiens]
Length = 823
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 180/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYVCDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEI--SSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ S
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKPMPSFVDRIFGGELTSM 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 676 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 734
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 735 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 794
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 795 HISDTHVQAVPTTKVLNSQAYLLFYERI 822
>gi|62897327|dbj|BAD96604.1| ubiquitin specific protease 16 isoform a variant [Homo sapiens]
Length = 823
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 180/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYVCDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEI--SSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ S
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKEKSMPSFVDRIFGGELTSM 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 676 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 734
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 735 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 794
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 795 HISDTHVQAVPTTKVLNSQAYLLFYERI 822
>gi|5454156|ref|NP_006438.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Homo sapiens]
gi|75992941|ref|NP_001027582.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Homo sapiens]
gi|6686071|sp|Q9Y5T5.1|UBP16_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName: Full=Ubiquitin-processing
protease UBP-M; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|4454565|gb|AAD20949.1| ubiquitin processing protease [Homo sapiens]
gi|7717310|emb|CAB90432.1| human ubiquitin processing protease, EC 3.1.2.15 [Homo sapiens]
gi|119630332|gb|EAX09927.1| ubiquitin specific peptidase 16, isoform CRA_a [Homo sapiens]
gi|119630334|gb|EAX09929.1| ubiquitin specific peptidase 16, isoform CRA_a [Homo sapiens]
Length = 823
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 180/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYVCDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEI--SSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ S
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSM 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 676 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 734
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 735 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 794
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 795 HISDTHVQAVPTTKVLNSQAYLLFYERI 822
>gi|67969597|dbj|BAE01147.1| unnamed protein product [Macaca fascicularis]
Length = 759
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 182/382 (47%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYICDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGR-STEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
+ G+ D + + + + + ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQAGITTPKPEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNS 188
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 PSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 248
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 249 NLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYL 306
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ ST+
Sbjct: 307 LDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTSTI 366
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C +C S V+E FLDLSLPV
Sbjct: 367 MCDQCRTVSLVHESFLDLSLPV 388
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC 965
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKC 732
>gi|38194903|gb|AAR13293.1| USP16 [Homo sapiens]
Length = 408
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 180/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYVCDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEI--SSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ S
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSM 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
>gi|426392739|ref|XP_004062698.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Gorilla gorilla gorilla]
gi|426392741|ref|XP_004062699.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2
[Gorilla gorilla gorilla]
Length = 826
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 180/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYICDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E + +++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQAGITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ S
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSM 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 738 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 797
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 HISDTHVQAVPTTKVLNSQAYLLFYERI 825
>gi|330789588|ref|XP_003282881.1| hypothetical protein DICPUDRAFT_96224 [Dictyostelium purpureum]
gi|325087165|gb|EGC40545.1| hypothetical protein DICPUDRAFT_96224 [Dictyostelium purpureum]
Length = 1173
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 100/168 (59%), Gaps = 20/168 (11%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFG-------PLTIALKKLFAETKP 281
V+GL NLGNTCFFNS+MQNL ++ L+D FL T G PLT+ + F K
Sbjct: 194 VKGLDNLGNTCFFNSIMQNLTHVNILRDIFLKEPGTPGSKIHTSSPLTMEMYYFF--NKM 251
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
I+P F IC K+P+F+G++Q DSHELLR LLDGL SEE +R
Sbjct: 252 YKTKHTHISPTGLFSEICKKSPRFRGFKQQDSHELLRYLLDGLISEEQNTTQRR------ 305
Query: 342 GISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ P ++D +FGGQ+ S + C CG+ S YEPFLDLSLP+P++
Sbjct: 306 -----KDPTYIDKIFGGQLISIITCFHCGYVSKTYEPFLDLSLPIPSQ 348
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 55/179 (30%)
Query: 907 IVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT 966
I K +R+A+K+ L++ PP LTI LKRF Q R K + + F +++L + D
Sbjct: 896 IEKYRRNASKQYLLSSTPPFLTIQLKRFMQ-TRTGFQKNSKRIEFPIVLDLSSFTDQTKN 954
Query: 967 DHD-------------------------------------------NYDYRLVGVVEHLG 983
+ N Y+L G+VEH+G
Sbjct: 955 KKEKEKEEQKEENEEKEKEEQEENVENKENEEEKEEEKEEEIENIHNQKYQLNGIVEHMG 1014
Query: 984 TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
M GGHYVAY+ + W++ SD R SL V+ + Y+LFY+KI
Sbjct: 1015 GMGGGHYVAYIY-----------DDYNEQWFYISDSTFRPSSLSHVVSNDPYLLFYKKI 1062
>gi|50312664|ref|NP_001001992.1| ubiquitin carboxyl-terminal hydrolase 16 isoform b [Homo sapiens]
gi|119630333|gb|EAX09928.1| ubiquitin specific peptidase 16, isoform CRA_b [Homo sapiens]
Length = 822
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 180/382 (47%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYVCDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGR-STEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
+ G+ D + + + + + ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQASITTPKPEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNS 188
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 PCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 248
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 249 NLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRYL 306
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ S +
Sbjct: 307 LDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSMI 366
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C +C S V+E FLDLSLPV
Sbjct: 367 MCDQCRTVSLVHESFLDLSLPV 388
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 675 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 733
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 734 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 793
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 794 HISDTHVQAVPTTKVLNSQAYLLFYERI 821
>gi|21314967|gb|AAH30777.1| Ubiquitin specific peptidase 16 [Homo sapiens]
gi|123997869|gb|ABM86536.1| ubiquitin specific peptidase 16 [synthetic construct]
Length = 822
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 180/382 (47%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYVCDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGR-STEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
+ G+ D + + + + + ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKHASITTPKPEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNS 188
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 PCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 248
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 249 NLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRYL 306
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ S +
Sbjct: 307 LDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSMI 366
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C +C S V+E FLDLSLPV
Sbjct: 367 MCDQCRTVSLVHESFLDLSLPV 388
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 675 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 733
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 734 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 793
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 794 HISDTHVQAVPTTKVLNSQAYLLFYERI 821
>gi|114683766|ref|XP_001159952.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 3 [Pan
troglodytes]
gi|114683768|ref|XP_001160171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 7 [Pan
troglodytes]
gi|397484120|ref|XP_003813229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1 [Pan
paniscus]
gi|397484122|ref|XP_003813230.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2 [Pan
paniscus]
gi|410210956|gb|JAA02697.1| ubiquitin specific peptidase 16 [Pan troglodytes]
gi|410260302|gb|JAA18117.1| ubiquitin specific peptidase 16 [Pan troglodytes]
gi|410304130|gb|JAA30665.1| ubiquitin specific peptidase 16 [Pan troglodytes]
gi|410350395|gb|JAA41801.1| ubiquitin specific peptidase 16 [Pan troglodytes]
Length = 826
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 179/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYICDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEI--SSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQAGITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
V+GL+NLGNTCFFN+VMQNL L+ +++
Sbjct: 189 SPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRQLLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ S
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTSM 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 738 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 797
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 HISDTHVQAVPTTKVLNSQAYLLFYERI 825
>gi|349603148|gb|AEP99068.1| Ubiquitin carboxyl-terminal hydrolase 16-like protein, partial
[Equus caballus]
Length = 702
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 178/389 (45%), Gaps = 76/389 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ W+
Sbjct: 23 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPYSWL 72
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRH---ARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 73 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYLCDDEVQYCTS 127
Query: 167 EENGENKDALSEVVKLIK---GRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDL-- 221
+ L +VV ++ G +T S+ D + + + E K+E ++
Sbjct: 128 -------NRLGQVVCYVRKQAGITTPKSAKDNGNIELENKKLEKESKNEQEREKKENMAK 180
Query: 222 -----DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------- 265
+ + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 181 ENPSTNSPSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSETIVKIEPPDLA 240
Query: 266 ------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS 313
GPLT+A+ + E + ET + ++ PR F +C KA +FKGYQQ DS
Sbjct: 241 LTEPLEINLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPRELFSQVCKKAVRFKGYQQQDS 298
Query: 314 HELLRCLLDGLCSEELA------FRKRNSPSEG------NGISSNQG----PVFVDYVFG 357
ELLR LLDG+ +EE + S +E N + + P FVD +FG
Sbjct: 299 QELLRYLLDGMRAEEHQRVSKGILKAFGSSTEKLDEELKNKVKDYEKKKSVPSFVDRIFG 358
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G++ ST+ C EC S V+E FLDLSLPV
Sbjct: 359 GELTSTIMCDECRTVSLVHESFLDLSLPV 387
>gi|194376846|dbj|BAG57569.1| unnamed protein product [Homo sapiens]
Length = 808
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 180/382 (47%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 10 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 59
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 60 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYVCDNEVQYCSS 114
Query: 167 EENGENKDALSEVVKLIKGR-STEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
+ G+ D + + + + + ++++E+ S N K E+ ++
Sbjct: 115 NQLGQVVDYVRKHASITTPKPEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNS 174
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 175 PCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 234
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 235 NLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRYL 292
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ S +
Sbjct: 293 LDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSMI 352
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C +C S V+E FLDLSLPV
Sbjct: 353 MCDQCRTVSLVHESFLDLSLPV 374
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 661 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 719
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 720 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 779
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 780 HISDTHVQAVPTTKVLNSQAYLLFYERI 807
>gi|403259080|ref|XP_003922063.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Saimiri
boliviensis boliviensis]
Length = 826
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 179/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKSEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H L + +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMTPRSEPHCLFLSLDNWSV-WCYICDNEVQYRSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E + +++E+ S N K E+ ++
Sbjct: 129 NQLGQVADYVRKQAGITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPSVN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQ------------------DYFLNAELT 264
+ V+GL+NLGNTCFFN+VMQNL L+ D L L
Sbjct: 189 SPSQLTVKGLSNLGNTCFFNAVMQNLSQTPVLRELRKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 265 F-----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELL
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLCY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTST 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N+ + G G W+
Sbjct: 738 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANRHLSNLVLHGDIPQDFEMESKGQWF 797
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 HISDTHVQAVPTSKVLNSQAYLLFYERI 825
>gi|123983160|gb|ABM83321.1| ubiquitin specific peptidase 16 [synthetic construct]
Length = 822
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 180/382 (47%), Gaps = 62/382 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYVCDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGR-STEISSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLDG 223
+ G+ D + + + + + ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKHASITTPKPEKDNGNIELENKKLEKESKNEPEREKKENMAKENPPMNS 188
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------------------ 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 PCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEI 248
Query: 266 -----GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR L
Sbjct: 249 NLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRYL 306
Query: 321 LDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIASTV 364
LDG+ +EE + NS + + N+ P FVD +FGG++ S +
Sbjct: 307 LDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSMI 366
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C +C S V+E FLDLSLPV
Sbjct: 367 MCDQCRTVSLVHESFLDLSLPV 388
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 675 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 733
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 734 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 793
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 794 HISDTHVQAVPTTKVLNSQAYLLFYERI 821
>gi|443695988|gb|ELT96769.1| hypothetical protein CAPTEDRAFT_225117 [Capitella teleta]
Length = 909
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 196/474 (41%), Gaps = 125/474 (26%)
Query: 35 ESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPI--RCEDCREGVGDRRGKKGKGK 92
ES+D+GV + CPH+ K ++ + + K +P+ C DCR G G
Sbjct: 35 ESSDEGVTA----RGCPHVSKAVNLNSVR-KALRLNPVIGECTDCRNDSTTTVGATG--- 86
Query: 93 HGKKKGSSLVDSK---AIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQW 146
GS VD +W+CL C H CG + H ++H + R H +V+
Sbjct: 87 -----GSDDVDEAVDVTVWICLQCAHQGCG----RESEHKHALKHCKTPRSSSHAMVLNV 137
Query: 147 ENPHLRWCFPCN--TLIPVEKTEENGENKDALSEVVKLIKGRSTEISS------------ 192
+ + WC+ C+ L P NG+ + + V K + S I S
Sbjct: 138 TH-RMIWCYDCDEQVLSPA-----NGKLHECVEYVCKHMGVTSNSIDSPQPGLKRSGSQK 191
Query: 193 VDVEDAWFGSGNVNSEIKSESTVVSGSDLD--------------GNACYVVRGLANLGNT 238
D E+ S ++ K+ S + DL A VRGL+NLGNT
Sbjct: 192 SDGEEVTTQSSTSATDSKNGSKKETLQDLKQPKAGGSSSVCQSLSQALPKVRGLSNLGNT 251
Query: 239 CFFNSVMQNL-------LAMSQLQ-------------------------------DYFLN 260
CFFN+VMQ++ M +L D F +
Sbjct: 252 CFFNAVMQSMSQTYLLGHVMEELNTKDMKLPGCPKASEDDEDEGQLSSSEEAGSDDEFAD 311
Query: 261 AELTFGPLTIALKKLFAETKP--------ETGLRN-VINPRSFFGCICSKAPQFKGYQQH 311
++ PL I+L + TK G RN ++P S F +C K P+FKG+QQ
Sbjct: 312 CKIQLDPLNISLGDIGVLTKSVLEFYRDMNGGSRNGTLSPSSLFNQVCKKVPRFKGFQQQ 371
Query: 312 DSHELLRCLLDGLCSEEL---------------AFRKRNSPSEGN---GISSNQGP-VFV 352
DSHELLR LLDG+ +E+ ++++ P + + Q F+
Sbjct: 372 DSHELLRHLLDGMKGDEIRRRQEAILKQFDLADTWKRKKVPDDTKLKIKVYGRQAKRTFI 431
Query: 353 DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
D VFGG STV C +C S ++EPFLD+SLP+ +K +Q R KK +
Sbjct: 432 DNVFGGHFISTVLCEDCRTPSQIFEPFLDISLPITEEKTVRPNSQWGGRGKKER 485
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 98/205 (47%), Gaps = 50/205 (24%)
Query: 887 QLVAGN-------CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDAR 939
+L+ GN C +++K K V +A+K++LI + PP+LT+HLKRF Q
Sbjct: 705 ELLTGNNKFGCVVCTRQKNKKSGDKDKTEMVLANASKQLLILQLPPVLTLHLKRFQQMGF 764
Query: 940 GRLSKLNGHVNFSEIINLRPYMDPGCT----DHDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
L K+N HV F ++++ PY C + Y L G+VEH G + GGHY AYV+
Sbjct: 765 S-LRKVNRHVEFPMLLDVAPYCSALCQGIKPNQTRVLYSLYGIVEHSGRLTGGHYTAYVK 823
Query: 996 GGPKNKVKAKKESVG-------------------------------------GVWYHASD 1018
KN+ + +++ + G WY+ SD
Sbjct: 824 VRAKNQQQQQQKFLSDMSSMSIDSMVEAMRSMSSASASLHEDEATEDMKPPPGKWYYISD 883
Query: 1019 VYVREVSLE-EVLRCEAYILFYEKI 1042
V EV+ E +LRC+AY+LFYE+I
Sbjct: 884 SRVNEVTHEANILRCQAYLLFYERI 908
>gi|168035217|ref|XP_001770107.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678633|gb|EDQ65089.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 334
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 100/146 (68%), Gaps = 14/146 (9%)
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLR 958
K+E K+V VKRDATKR LI+KAP +LT+HLKRF+QD+ GRLSKL GH+ F E ++L
Sbjct: 198 KLETDAPKLVSVKRDATKRFLISKAPLVLTVHLKRFAQDSYGRLSKLGGHITFHEQLDL- 256
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGG--VWYHA 1016
P D Y+L+G VEH GTMRGGHYV YV+G ES+ G WY+
Sbjct: 257 ---GPDGVKQDGV-YQLIGTVEHSGTMRGGHYVGYVKG-------ESDESIEGTSTWYYI 305
Query: 1017 SDVYVREVSLEEVLRCEAYILFYEKI 1042
SD +VR+ SLE+VL+ EAY+LFYE++
Sbjct: 306 SDSHVRKTSLEDVLQSEAYLLFYERL 331
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 112/189 (59%), Gaps = 25/189 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-GPLTIALKKLFAETKPETGLRN 287
++GL NLGNTCFFNSVMQNL+ + L+++F + G L ++L+K F E P R+
Sbjct: 1 MKGLMNLGNTCFFNSVMQNLVGVRMLREHFSKETIAQEGVLKLSLRKFFMEMDPNPIERS 60
Query: 288 VIN---PRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGIS 344
++ RS ++A F Q DSHELLRCLLDGL EE + RK + ++ S
Sbjct: 61 DLDIGAERS------TRARSFGNGIQQDSHELLRCLLDGLHMEEESIRKARTGADKEIES 114
Query: 345 SNQGPV---------------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ V V+Y+FGGQ +STV C ECGHSS VYEPFLDLSLP+P+K
Sbjct: 115 ATDSKVKENGSLDKVPKRSETLVEYMFGGQFSSTVTCCECGHSSVVYEPFLDLSLPIPSK 174
Query: 390 KAPSKKTQP 398
++ K ++P
Sbjct: 175 QSLGKISEP 183
>gi|357142018|ref|XP_003572430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Brachypodium
distachyon]
Length = 773
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 94/130 (72%), Gaps = 11/130 (8%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDY 973
AT+ +L+ K PP+LTI LKR + D LSKL GHV+F+EI+++ P+MDP C D DN Y
Sbjct: 649 ATQTILLTKLPPVLTIQLKRSAAD----LSKLVGHVSFNEILHVGPFMDPSCEDKDNSSY 704
Query: 974 RLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
RLVGV+EH+G T+RGGHY+AYVR ++S W A+D +REVSL+EVLRC
Sbjct: 705 RLVGVIEHIGSTLRGGHYIAYVRA------DRNQQSGSSSWVCANDSSIREVSLQEVLRC 758
Query: 1033 EAYILFYEKI 1042
EAYILFYE++
Sbjct: 759 EAYILFYERM 768
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 147/329 (44%), Gaps = 29/329 (8%)
Query: 106 AIWVCLGCG-HYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVE 164
+ +C CG H+ G VG P+ H HA + H + + +++P+ +CF C + +
Sbjct: 118 GMMLCTECGCHFCTGPVGDMLNPRGHAYWHAHEAMHRVALWYDDPYKAYCFDCEEGLTLG 177
Query: 165 KTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGN 224
+ ++KDA + V K + +D W GS +V + V DG
Sbjct: 178 GN--SSQDKDAWAVVAK------------NGKDQW-GSEDVGGHASGVAYVYG----DG- 217
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETG 284
YV+RG+ NLG++C+ N+ +Q LLA+ +L+ L + G LK+LF ET
Sbjct: 218 --YVIRGILNLGSSCYMNASLQCLLALRKLRRMILGLDAWLGFTGHYLKELFVETGSAND 275
Query: 285 LRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGIS 344
++NPR C+ QFKG + D++E L L + L E N G +
Sbjct: 276 ATCLLNPRMLLDCVGGSGQQFKGNEMEDTYEFLVSLRNALDKEVKELNDLNCVQGGAVL- 334
Query: 345 SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT-KKAPSKKTQPASRAK 403
P F + +F Q+ T+ C C ++S DL PV K P ++ +S
Sbjct: 335 ----PEFGESIFRVQMCQTISCKSCPNNSVQQIELYDLQAPVALPSKDPLARSVVSSPKI 390
Query: 404 KTKLPPKKSGRIRAKGTKDTHAVTTQSIS 432
++ + P+ + + T+ + Q+I+
Sbjct: 391 ESHMSPRNICKKLFQETQKSDGEKLQTIA 419
>gi|225735553|ref|NP_001139569.1| ubiquitin carboxyl-terminal hydrolase 16 [Danio rerio]
gi|226749947|sp|A8HAL1.1|UBP16_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
Length = 815
Score = 146 bits (369), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 178/412 (43%), Gaps = 87/412 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG ++ + + C+DC + + + G +S A+W+
Sbjct: 24 CTHIRKGTENSVLKKACLNEHWSSCQDCEQDKPEEKQILEDQTDG--------ESPAVWM 75
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG G H ++H R H LV+ + + WC+ C+ + T
Sbjct: 76 CLKCGHRGCGRSG-----NQHAIKHYETPRSEPHCLVLSLDVWSV-WCYICDDEVQYSST 129
Query: 167 -------------------EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNS 207
+ N K ++ + T+ + S
Sbjct: 130 GQLAQLITNIRKQVLTAPDKRNASKKSWKEDISVMNSAEQTQDEEKGKKGKQKSSSKQED 189
Query: 208 EIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--------- 258
KS + +GS +A VRGL+NLGNTCFFN+V+Q+L L++
Sbjct: 190 SPKSHQSAAAGS----SAVVSVRGLSNLGNTCFFNAVVQSLSQTQYLRELLKQIAEEKSS 245
Query: 259 ------LNAEL--------TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQ 304
L++EL G LT+A+ +L E + ET + V+ P+ F +C KAP+
Sbjct: 246 FSITPALSSELDPLQIQLERPGSLTLAMCQLMNEIQ-ETK-KGVVTPKELFTQVCKKAPR 303
Query: 305 FKGYQQHDSHELLRCLLDGLCSEELAFRKRNS------PSEGNGISSNQGPV-------- 350
FKG+QQ DS ELLR LLDG+ +EE ++ NS S G + Q
Sbjct: 304 FKGFQQQDSQELLRYLLDGMRAEEA--KRVNSGILEALKSSGKNFEAEQTKKIVKEYEKD 361
Query: 351 -----FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQ 397
FVD VFGG ++STV C EC S V E FLDLSLPV +A KK Q
Sbjct: 362 GAPKNFVDRVFGGAMSSTVMCKECKTVSLVTEMFLDLSLPV-ADEAYRKKNQ 412
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 82/146 (56%), Gaps = 14/146 (9%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V RDA K++LI+ P +LT+HLKRF Q A + K+N HV F +I++L P+ CT
Sbjct: 670 VYRDALKQMLISDPPVVLTLHLKRFQQVAYS-VCKVNRHVQFPQILDLAPFCSLNCTGVK 728
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP------KNKVKAKK---ESVGGVWYHA 1016
Y L G+VEH GTMR GHY AYV+ P +N A E+ G W+H
Sbjct: 729 EGETQVLYSLYGIVEHSGTMRSGHYTAYVKSRPSTHNCVQNGTAAASGDAEASKGSWFHI 788
Query: 1017 SDVYVREVSLEEVLRCEAYILFYEKI 1042
SD V V +V +AY+LFYEKI
Sbjct: 789 SDSSVHPVPEAKVQSSQAYLLFYEKI 814
>gi|357142015|ref|XP_003572429.1| PREDICTED: uncharacterized protein LOC100832348 [Brachypodium
distachyon]
Length = 416
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDY 973
AT+ +L+ PP+LTI LKRF G +SKL GHV+F EI+N+ P++ P C D DN Y
Sbjct: 294 ATQTILLTNLPPVLTIQLKRFV----GDISKLRGHVSFKEILNVGPFVHPSCVDKDNASY 349
Query: 974 RLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
RLVGVVEHLG + GGHY+AYVR G ++ S W A+D + EVSL+EVLRC
Sbjct: 350 RLVGVVEHLGPLLNGGHYIAYVRAGCN-----QQSSGSSSWVCANDHTITEVSLQEVLRC 404
Query: 1033 EAYILFYEKI 1042
EAYILFYE++
Sbjct: 405 EAYILFYERM 414
>gi|432908056|ref|XP_004077736.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like [Oryzias
latipes]
Length = 794
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 174/401 (43%), Gaps = 76/401 (18%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H++K +D + + S + C DC + +R G+ V S I V
Sbjct: 38 CQHVNKAVDLGSVKKSVLSGMWLVCSDC---LKERTMIDGEP----------VASHDILV 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL CG C + + H H H + I N WCF CN +
Sbjct: 85 CLKCGFQGCNQSEIQHAVKHHQAFHLES--HCITISL-NTWKAWCFECNEELSTHC---- 137
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSEST-----VVSGSDLDGN 224
NK AL++ + ++ +ST+ ++ G+ +++ ES+ S +
Sbjct: 138 --NKKALAQTLDFLQKQSTKATT--------GASPKIIKLRDESSDYVDPSRGKSPVINT 187
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA-------------ELTFGPLTIA 271
V+G+ NLGNTCFFN+VMQNL L D E+ PLT+
Sbjct: 188 TLAPVKGITNLGNTCFFNAVMQNLSQTHMLIDLIQEVKEKGHKMKICPPVEMNLNPLTVT 247
Query: 272 LKK---------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLD 322
L +F ++ E G + INP+ F +C KAP+FKGYQQ DS ELL LLD
Sbjct: 248 LPSPEPLTAAMFVFLQSMKEAG-KGPINPKILFNQLCQKAPRFKGYQQQDSQELLHYLLD 306
Query: 323 GLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVR 365
+ EE + N+P+E + V FVD +F G++ +T+
Sbjct: 307 SIRVEETKRVKAAILKAFNNPTEKTADEETKRQVKAYGKEGVKLNFVDRIFVGELTNTIM 366
Query: 366 CVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
C EC H STV E F+D+SLP+ ++ SK + P K ++
Sbjct: 367 CEECEHISTVKEAFIDISLPIIEERM-SKPSNPGRIGKASR 406
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
Query: 906 KIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC 965
K+ K+ A K++LI+ PP++ +HLKRF Q A L K+N HV+F I++L P+ C
Sbjct: 642 KVEKIYTSARKQMLISLLPPVIMLHLKRFHQ-AGMNLRKVNRHVDFPLILDLAPFCSASC 700
Query: 966 TD---HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK-------------VKAKKESV 1009
+ + Y L G+VEH G+MRGGHY AYV+ P + + S
Sbjct: 701 KNLAAGERVLYSLYGIVEHSGSMRGGHYAAYVKVRPPQRRTELLHKNLSGQGARDASCSS 760
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
G W + SD V+ V VL +AY+LFYE+
Sbjct: 761 QGQWVYVSDTTVQTVPESRVLNSQAYLLFYEE 792
>gi|405957304|gb|EKC23526.1| Ubiquitin carboxyl-terminal hydrolase 16 [Crassostrea gigas]
Length = 1048
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 188/445 (42%), Gaps = 110/445 (24%)
Query: 25 KSVLQQSKPV-ESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGD 83
K L+++K V +S+DD + V C H++ ++ + +G C C
Sbjct: 46 KHKLRKTKDVSDSSDDALAV----PSCNHINMAVNVAAMRKGLGKQVYGECASCT----- 96
Query: 84 RRGKKGKGKHGKKKGSSLVDSK-AIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR--- 139
+ +G G + +L+D++ +WVCL CG+ C + H ++H R
Sbjct: 97 KTAPEGDSSQGAEAAPALLDTEPTLWVCLQCGNQGCDR----NSRDKHALKHYETPRSSC 152
Query: 140 HPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAW 199
H LVI + + WC+ C+ + +E+++ L E V +I+ +
Sbjct: 153 HCLVINTTSWTV-WCYKCDDEVQLEQSKR-------LQESVDIIRKQ------------- 191
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
+G +E +V + V +GL+NLGNTCFFN+VMQNL ++ +
Sbjct: 192 --AGLPQAEPDFHLQIVC-------SVLVFKGLSNLGNTCFFNAVMQNLTQTPCIESVVV 242
Query: 260 N-------------------------------------AELTF---GPLTIALKKLFAET 279
E+ GPLT + E
Sbjct: 243 ERSKKGRLSSLSCKRDSDLDSSSGSEDSDDEASIDLSPIEIVLPEAGPLTQTMIAFLQEM 302
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
TG + +NP F IC KA +F+G+QQ DSHELLR LLD + +EE+ R+
Sbjct: 303 NNSTGRASTVNPSPLFTQICKKAQRFRGFQQQDSHELLRYLLDNMRTEEIKARQAGILKH 362
Query: 340 GNGISSNQGP--------------------VFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
+ N P FVD +FGG + STV C EC + S ++EPF
Sbjct: 363 FK-LPENVNPKKVDDDTKIKIKEYGRQVKYTFVDSLFGGYLMSTVTCEECKNISQIFEPF 421
Query: 380 LDLSLPVPTKKAPSKKTQPASRAKK 404
LDLSLPV T++ P + Q + KK
Sbjct: 422 LDLSLPV-TEEKPQRPNQMSGGRKK 445
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 79/173 (45%), Gaps = 40/173 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD- 967
KV A K+ LI P +LT+HLKRF Q K+N HV+F +++L P+ C
Sbjct: 876 KVYSSAAKQYLIYTPPAVLTLHLKRFEQVGFSS-RKVNRHVDFPFVLDLAPFCSSLCQGV 934
Query: 968 ---HDNYDYRLVGVVEHLGTMRGGHYVAYVR--------------GGPKNK--------- 1001
Y L GVVEH G + GHY AYV+ G P K
Sbjct: 935 RPGQKKILYALYGVVEHSGRLNAGHYTAYVKVRPNIGIITDFLNAGPPTLKDCTKRYLEV 994
Query: 1002 ------VKAKKESV------GGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
++ ++ES+ G WYH SD V E + V R +AY+LFYE+I
Sbjct: 995 QNSTASLEEQEESIVERLVPPGKWYHISDSRVSETTESTVQRAQAYLLFYERI 1047
>gi|345328777|ref|XP_001506389.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45
[Ornithorhynchus anatinus]
Length = 798
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 169/393 (43%), Gaps = 99/393 (25%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + ++ + + S C +C + +RR G+ V W+
Sbjct: 37 CQHVSQAVNVHHVKRAVAQSVWSVCSEC---LKERRLSDGEP----------VTPSDTWL 83
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG C + H ++H+R R H +VI + WC+ CN +
Sbjct: 84 CLKCGFQGCSQ----NSESQHSLKHSRTARAEPHCIVISLST-WIIWCYECNEELSTHC- 137
Query: 167 EENGENKDALSEVVKLIKGR--STEISSV-----------DVEDAWFGSGNVNSEIKSES 213
NK L+++V ++ TE SS+ + + W G VNS
Sbjct: 138 -----NKKVLAQIVDFLQKHVSKTEASSLSKVIRLREEKCEASEIWKGKYQVNS------ 186
Query: 214 TVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN-----AELTF--- 265
A V+G+ NLGNTCFFN+VMQNL +L + A+L
Sbjct: 187 -----------APLSVKGINNLGNTCFFNAVMQNLAQTHKLNELMYEIKEKGAKLKIFHS 235
Query: 266 ---------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQ 310
GPLT A+ LF + E G + ++P++ F +C KAP+FKG+QQ
Sbjct: 236 SDTESDSLMVTLSSPGPLTSAMF-LFLHSMKEAG-KGPLSPKALFSQLCQKAPRFKGFQQ 293
Query: 311 HDSHELLRCLLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVD 353
DS ELL LLD + +EE + N+P+ + V F+D
Sbjct: 294 QDSQELLHYLLDAMRTEETKRIQAGILKAFNNPTTKTADEETRKKVKAYGREGVKMNFID 353
Query: 354 YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+F G++ STV C EC + ST+ EPFLDLSLP+
Sbjct: 354 RIFVGELTSTVMCEECENISTMKEPFLDLSLPI 386
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 23/198 (11%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNCE----SEESKVEEINSKIVKVKRDATKRVLIN 921
CSV S E + +++L+ NC +E +K K V +A K++LI+
Sbjct: 602 CSVQSCLYQFTSVE-LLMGNNKLLCENCTEKTPAEHAKTYSSEKKPEGVYTNARKQLLIS 660
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD---HDNYDYRLVGV 978
P +L +HLKRF Q A L K+N HV+F +++L P+ C + Y L G+
Sbjct: 661 VVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLVLDLAPFSSVACKNAPGSGKVLYTLYGI 719
Query: 979 VEHLGTMRGGHYVAY--VRGGPK---------NKVKAKKESV---GGVWYHASDVYVREV 1024
VEH G+MRGGHY AY VRG PK V+ KE++ GG W + SD +V+ V
Sbjct: 720 VEHSGSMRGGHYTAYVKVRGPPKASLEHVAGIQNVQGLKEAMGACGGQWVYVSDTHVQMV 779
Query: 1025 SLEEVLRCEAYILFYEKI 1042
L +AY+LFYE++
Sbjct: 780 PESRALSAQAYLLFYERM 797
>gi|281205647|gb|EFA79836.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 1086
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 98/169 (57%), Gaps = 23/169 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIALKKLFAE 278
++GL NLGNTCFFNS+MQNL ++ L+D L N + GPLT+ + F
Sbjct: 136 IKGLQNLGNTCFFNSIMQNLTHINALRDVLLVPPGTSSISNNPVKSNGPLTVEMHHFF-- 193
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS 338
TK I+P S F IC KAP+F G++Q D+HELL LLDGL SEE K
Sbjct: 194 TKMYKLNSPYISPHSLFTEICKKAPRFLGFRQQDAHELLIHLLDGLISEEQEATK----- 248
Query: 339 EGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + P ++D +FGG++ S + C CG+ S +EPFLDLSLP+P
Sbjct: 249 ------NKRDPTYIDKIFGGRLISIITCFHCGYVSKTHEPFLDLSLPLP 291
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 13/137 (9%)
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMD--PGC 965
V ++R+A+K+ L+ PP LTI LKRF Q +R K +++ +++L + D
Sbjct: 809 VIIRRNASKQYLLANTPPYLTIQLKRFMQTSRNGFQKDGKRISYPLVLDLTAFTDQSSAS 868
Query: 966 TDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
T +++ YRL GVVEH+G M GGHYVA++ + G WY+ SD R S
Sbjct: 869 TSRESHRYRLNGVVEHMGGMGGGHYVAHIY-----------DDTTGQWYYVSDSTSRLSS 917
Query: 1026 LEEVLRCEAYILFYEKI 1042
LE+V+ EAY+LFY+K+
Sbjct: 918 LEQVMSNEAYVLFYKKL 934
>gi|427789071|gb|JAA59987.1| Putative ubiquitin-specific protease [Rhipicephalus pulchellus]
Length = 625
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 153/337 (45%), Gaps = 70/337 (20%)
Query: 108 WVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVE 164
W+CL CGH CGG H VRH+ H L + + L WCFPCN +
Sbjct: 74 WLCLQCGHRGCGGTA------KHGVRHSETPHSDSHALALSGQTLQL-WCFPCNNWV--- 123
Query: 165 KTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGN 224
E N + + + K + S + + V+ + + + S V +
Sbjct: 124 --EANPQVTQIVQNLKKKMASSSKKAKAAAVQAEDEEPAAEANCVDAGSGDVKEQRVPCG 181
Query: 225 ACYVVRGLANLGNTCFFNSVMQNL---------LA---MSQLQDYF-------------- 258
V+GL+NLGNTC+FN+V+Q L LA S+LQ F
Sbjct: 182 TWTAVKGLSNLGNTCYFNAVLQGLGQTPLLQPLLARRCASKLQCTFDPGSTVEGSETPEL 241
Query: 259 --LNAELTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHE 315
LN EL GPLT AL E + +PR+ F +C AP F+G+QQHDSHE
Sbjct: 242 GSLNVELPGPGPLTSALALFLQELR-----MGSPHPRALFSKVCQVAPHFRGHQQHDSHE 296
Query: 316 LLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFV--------------------DYV 355
LLR LL+G+ +EE+ R++ + + G+SS P V D +
Sbjct: 297 LLRHLLEGVRTEEVK-RQKQAVLQAFGLSSKVDPNKVEPDTKAKIQAYKKAVARTPLDDI 355
Query: 356 FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
FGG + ST+ C +CG S EPF DLSLP+P +K P
Sbjct: 356 FGGILLSTIVCQQCGKVSRREEPFQDLSLPIPEEKPP 392
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 70/129 (54%), Gaps = 20/129 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDN--- 970
A+ ++ + +AP +LT+HLKRF Q A L K+ HV F ++L P+ C D +
Sbjct: 506 ASLQLQVFEAPRVLTLHLKRFQQGAT--LRKVQKHVPFPVELDLTPFC---CRDAEMKAP 560
Query: 971 YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
Y L GVVEH G M GGHY AYVRG G W+HASD V + + VL
Sbjct: 561 ATYILYGVVEHAGRMTGGHYTAYVRG------------ASGKWFHASDSRVVPATQQNVL 608
Query: 1031 RCEAYILFY 1039
+AY+LFY
Sbjct: 609 ASQAYLLFY 617
>gi|187956830|gb|AAI57839.1| Ubiquitin specific peptidase 45 [Homo sapiens]
gi|223462195|gb|AAI50649.1| Ubiquitin specific peptidase 45 [Homo sapiens]
Length = 814
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 80/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RNLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 303 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 362
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + STV +PF+D+SLP+
Sbjct: 363 MCEECANISTVKDPFIDISLPI 384
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 608 SQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKVEG 664
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 665 VYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNAS 723
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV---------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 724 VGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADSESAGQ 783
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD Y++ V L +AY+LFYE++
Sbjct: 784 WVHVSDTYLQVVPESRALSAQAYLLFYERV 813
>gi|119568858|gb|EAW48473.1| hCG17265, isoform CRA_e [Homo sapiens]
Length = 814
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 80/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RNLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 303 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 362
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + STV +PF+D+SLP+
Sbjct: 363 MCEECANISTVKDPFIDISLPI 384
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 608 SQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKVEG 664
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 665 VYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNAS 723
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV---------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 724 VGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADSESAGQ 783
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD Y++ V L +AY+LFYE++
Sbjct: 784 WVHVSDTYLQVVPESRALSAQAYLLFYERV 813
>gi|114608614|ref|XP_001139854.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 3 [Pan
troglodytes]
gi|114608616|ref|XP_518650.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 4 [Pan
troglodytes]
gi|410222328|gb|JAA08383.1| ubiquitin specific peptidase 45 [Pan troglodytes]
gi|410260416|gb|JAA18174.1| ubiquitin specific peptidase 45 [Pan troglodytes]
gi|410307106|gb|JAA32153.1| ubiquitin specific peptidase 45 [Pan troglodytes]
gi|410348500|gb|JAA40854.1| ubiquitin specific peptidase 45 [Pan troglodytes]
Length = 814
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 80/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RSLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 303 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 362
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + STV +PF+D+SLP+
Sbjct: 363 MCEECANISTVKDPFIDISLPI 384
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 608 SQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKVEG 664
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 665 VYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNAS 723
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV---------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 724 VGDKVLYSLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADSESAGQ 783
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE++
Sbjct: 784 WVHVSDTYVQVVPESRALSAQAYLLFYERV 813
>gi|40788179|emb|CAE47746.2| ubiquitin specific proteinase 45 [Homo sapiens]
Length = 814
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 80/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RNLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 303 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 362
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + STV +PF+D+SLP+
Sbjct: 363 MCEECANISTVKDPFIDISLPI 384
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 606 TLSQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKV 662
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P +L +HLKRF + A L K+N HV+F +++L P+ C +
Sbjct: 663 EGVYTNARKQLLISAVPAVLILHLKRFHK-AGLSLRKVNRHVDFPLMLDLAPFCSATCKN 721
Query: 968 H---DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV-------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 722 ASVGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADNESA 781
Query: 1013 --WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD Y++ V L +AY+LFYE++
Sbjct: 782 GQWVHVSDTYLQVVPESRALSAQAYLLFYERV 813
>gi|122937412|ref|NP_001073950.1| ubiquitin carboxyl-terminal hydrolase 45 [Homo sapiens]
gi|296453002|sp|Q70EL2.3|UBP45_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 45; AltName:
Full=Deubiquitinating enzyme 45; AltName: Full=Ubiquitin
thioesterase 45; AltName:
Full=Ubiquitin-specific-processing protease 45
gi|162317590|gb|AAI56219.1| Ubiquitin specific peptidase 45 [synthetic construct]
gi|225000216|gb|AAI72477.1| Ubiquitin specific peptidase 45 [synthetic construct]
Length = 814
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 80/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RNLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 303 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 362
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + STV +PF+D+SLP+
Sbjct: 363 MCEECANISTVKDPFIDISLPI 384
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 606 TLSQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKV 662
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 663 EGVYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKN 721
Query: 968 H---DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV-------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 722 ASVGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADNESA 781
Query: 1013 --WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD Y++ V L +AY+LFYE++
Sbjct: 782 GQWVHVSDTYLQVVPESRALSAQAYLLFYERV 813
>gi|426354067|ref|XP_004044491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 1
[Gorilla gorilla gorilla]
gi|426354069|ref|XP_004044492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 2
[Gorilla gorilla gorilla]
Length = 814
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 80/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RSLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 303 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 362
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + STV +PF+D+SLP+
Sbjct: 363 MCEECANISTVKDPFIDISLPI 384
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 608 SQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKVEG 664
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 665 VYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNAS 723
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV---------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ AKK++V G+
Sbjct: 724 VGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNAKKKNVPGLKAADSESAGQ 783
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE++
Sbjct: 784 WVHVSDTYVQVVPESRALSAQAYLLFYERV 813
>gi|119568859|gb|EAW48474.1| hCG17265, isoform CRA_f [Homo sapiens]
Length = 437
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 80/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCGK----NSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RNLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 303 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 362
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + STV +PF+D+SLP+
Sbjct: 363 MCEECANISTVKDPFIDISLPI 384
>gi|397507876|ref|XP_003824407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 1 [Pan
paniscus]
gi|397507878|ref|XP_003824408.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 2 [Pan
paniscus]
Length = 814
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 80/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFCDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RSLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 303 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 362
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + STV +PF+D+SLP+
Sbjct: 363 MCEECANISTVKDPFIDISLPI 384
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 608 SQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKVEG 664
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 665 VYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNAS 723
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV---------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 724 VGDKVLYSLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADSESAGQ 783
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE++
Sbjct: 784 WVHVSDTYVQVVPESRALSAQAYLLFYERV 813
>gi|410959728|ref|XP_003986453.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Felis catus]
Length = 814
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 176/386 (45%), Gaps = 86/386 (22%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
CPH++ I + + I + C DC + +RR G+ V S IW+
Sbjct: 38 CPHVNLAISVNHVKKAIAENVWSVCSDC---LRERRFCDGQP----------VLSSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H V+H + R H + I + WC+ C+ EK
Sbjct: 85 CLKCGFQGCGR----NSESHHSVKHYKNQRTESHCITISLST-WIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L++ V ++ ++ + + F E K E+ GN+
Sbjct: 135 STHC-NKKVLAQTVDFLQKHVSK-----TQTSAFSRILKLCEEKYEAGE-KKKGRKGNSV 187
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN-----------------------AEL 263
V+G+ NLGNTCFFN+VMQNL A S + +N EL
Sbjct: 188 TPVKGITNLGNTCFFNAVMQNL-AQSYILSELMNESKENGTKLKIFPSSDSHLDPLMVEL 246
Query: 264 TF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLD 322
+ GPLT AL LF + ET + ++P+ F +C KAP+FKG+QQ DS ELL LLD
Sbjct: 247 SSPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHYLLD 304
Query: 323 GLCSEEL---------AF------------RKRNSPSEGN-GISSNQGPVFVDYVFGGQI 360
+ +EE AF +KR+ S G G+ N F+D +F G++
Sbjct: 305 AVRTEETKRIQAGILKAFNNPTTKTADDDTKKRSKVSYGREGVKMN----FIDRIFIGEL 360
Query: 361 ASTVRCVECGHSSTVYEPFLDLSLPV 386
STV C EC + STV +PF+D+SLP+
Sbjct: 361 TSTVMCEECANISTVKDPFIDISLPI 386
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEE----INSKI 907
S SQ IT E CSV +++ ++ +++L+ NC ++ K ++ K
Sbjct: 606 SLSQSYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTEKKQKYQKETISAEKKA 662
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P L +HLKRF Q A L K+N HV+F I++L P+ C +
Sbjct: 663 EGVYTNARKQLLISAIPANLILHLKRFHQ-AGLNLRKVNRHVDFPLILDLAPFCSATCKN 721
Query: 968 ---HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKN--KVKAKKESVG 1010
D Y L GVVEH G+MRGGHY AYV+ G KN +K
Sbjct: 722 VNVGDKVLYGLYGVVEHSGSMRGGHYTAYVKVRAPSRKLLEHITGKKNVPDLKEPDSESA 781
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 782 DQWVHVSDTYVQVVPESRALSAQAYLLFYERI 813
>gi|332218545|ref|XP_003258416.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 1
[Nomascus leucogenys]
gi|332218547|ref|XP_003258417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 2
[Nomascus leucogenys]
Length = 816
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 171/383 (44%), Gaps = 81/383 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFESSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKWETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-----------------------LNA 261
VRG+ NLGNTCFFN+VMQNL L D L
Sbjct: 185 RSLSVRGITNLGNTCFFNAVMQNLAQTYMLTDLMNDEIKESSTKLKIFPSSDSQLDPLVV 244
Query: 262 ELTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
EL+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL L
Sbjct: 245 ELSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYL 302
Query: 321 LDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAST 363
LD + +EE + N+P+ + V F+D +F G++ ST
Sbjct: 303 LDAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTST 362
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
V C EC + STV +PF+D+SLP+
Sbjct: 363 VMCEECANISTVKDPFIDISLPI 385
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 110/212 (51%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CS+ S E + +++L+ NC + K +E S K+
Sbjct: 608 TLSQSYITTSKE--CSIQSCLYQFTSVE-LLMGNNKLLCENCTKNKQKYQEEASFAEKKV 664
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P +L +HLKRF Q A + K+N HV+F +++L P+ C +
Sbjct: 665 EGVYTNARKQLLISTVPAVLILHLKRFHQ-AGLSVRKVNRHVDFPLVLDLAPFCSATCKN 723
Query: 968 ---HDNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVK---AKKESVGGV-------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 724 VSMGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHTTKKKNVPGLKEADSESA 783
Query: 1013 --WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE++
Sbjct: 784 GQWVHVSDTYVQVVPESRALSAQAYLLFYERV 815
>gi|189530188|ref|XP_692456.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like [Danio
rerio]
Length = 806
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 169/400 (42%), Gaps = 81/400 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + +D + + S C DC + G+ G H I V
Sbjct: 38 CQHVSRAVDLSSVKKAVTGSLWSVCSDCLKERNVLEGETA-GAHD------------ILV 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQ---WENPHLRWCFPCNTLIPVEKT 166
CL CG C + + + H+ H + I W+ WCF C +
Sbjct: 85 CLKCGFQGCNQAEVQHSTKHQQAHHS--DSHCITISLTTWKA----WCFECKEELSTHC- 137
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSEST----VVSGSDLD 222
NK AL++ + ++ +S + +S G+ + +++ E G
Sbjct: 138 -----NKKALAQTLDFLQKQSAKATS--------GTSSKLIKLREEPAEYVDTQRGKSPV 184
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN-------------AELTFGPLT 269
+ V+G+ NLGNTCFFN+VMQNL L D + E G LT
Sbjct: 185 NSTLIPVKGINNLGNTCFFNAVMQNLSQTHMLNDLIQDVKEKGHKMKISPSTETNLGSLT 244
Query: 270 IALKK---------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
+ L LF ++ E+G + ++P+ F +C KAP+FKGYQQ DS ELL L
Sbjct: 245 VTLPSPEPLTSAMFLFLQSMKESG-KGPVSPKILFNQLCQKAPRFKGYQQQDSQELLHYL 303
Query: 321 LDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAST 363
LD + EE + N+P+E + V FVD +F G++ ST
Sbjct: 304 LDSMRVEETKRIKAGILKAFNNPTEKTADEETKRQVKAYGKEGVKLNFVDRIFVGELTST 363
Query: 364 VRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAK 403
+ C EC H STV E F+D+SLP+ ++ SK T PA K
Sbjct: 364 IMCEECEHISTVKEAFIDISLPIIEERI-SKPTNPARLGK 402
Score = 109 bits (273), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEE----INSKIVKVKRDATKRVLIN 921
CSV S E + +++L+ NC + + + K KV A K++LI+
Sbjct: 614 CSVQSCLHQFTSIE-LLMGNNKLLCENCTDRRQRQMKRSGISDKKAEKVYTSARKQMLIS 672
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD---HDNYDYRLVGV 978
PP++T+HLKRF Q A L K+N HV+F +++L P+ C + + Y L G+
Sbjct: 673 ALPPVVTLHLKRFHQ-AGMNLRKVNRHVDFPLLLDLAPFCSATCKNLGSGERVLYSLYGI 731
Query: 979 VEHLGTMRGGHYVAYVR-GGPKNKVKAKKESVG---------GVWYHASDVYVREVSLEE 1028
VEH G+MRGGHY AYV+ P+ K + ++ G G W + SD V+ V
Sbjct: 732 VEHSGSMRGGHYAAYVKVRTPQRKPEQRRNQSGSREACSAPQGQWVYVSDTTVQTVPESR 791
Query: 1029 VLRCEAYILFYEKI 1042
VL +AY+LFYE++
Sbjct: 792 VLNSQAYLLFYEEL 805
>gi|393910647|gb|EFO25948.2| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 718
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 154/349 (44%), Gaps = 71/349 (20%)
Query: 106 AIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR----HPLVIQWENPHLRWCFPCNTLI 161
++W+C+ C + C ++H + H R R HPL E R CF C I
Sbjct: 80 SVWICVTCSYSGCD-------EKNHTLDHFRALRTGTEHPLFFAVEGKQFR-CFSCEKRI 131
Query: 162 PVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--------- 212
V + EE+G K L++ IK + +I+ ++ + G NS + E
Sbjct: 132 DVAE-EESGSIKAFLNDYNSFIKPK-LKINPLESQSMKSGGTKRNSSLTGEIDSKKNENS 189
Query: 213 -STVVSGSDLDGN---ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL------NAE 262
++ S + N V+GLANLGNTCFFNS+ Q LL L Y N E
Sbjct: 190 NEKCLTESKMKNNERKTLLPVKGLANLGNTCFFNSITQCLLHTHTLAVYINLIGREDNIE 249
Query: 263 LTFGPLTIA-------------------LKKLFAETKPETGLRNVINPRSFFGCICSKAP 303
L + I L +FA + I+P S F I KAP
Sbjct: 250 LMQNKVLIGDKLVQVPHVYLSLASFDGPLNNIFANFIRDFKAGLAIHPSSLFSEIARKAP 309
Query: 304 QFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------SPSEGN-------------GIS 344
+F+G+ Q D+HELLR L+DGL +EE+ K + + GN G+
Sbjct: 310 RFRGWAQQDAHELLRYLMDGLRTEEINRYKESISRYIKTARNGNPKLTDGELSLLAKGML 369
Query: 345 SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS 393
G +D VFGG + TV+C +CGH S YE FLDLSLP+P+ A +
Sbjct: 370 KACGRPLIDAVFGGTLLQTVKCSDCGHLSKTYEDFLDLSLPLPSTSAKT 418
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 113/253 (44%), Gaps = 57/253 (22%)
Query: 830 EKGKMKINDAVEMQSRSSCLRDSCSQESITDQDE--GSCSVDGATSSGYSAEKVYQSDSQ 887
E KM +N +E CL+ E++ D+ SC AT+ SA Y+ +
Sbjct: 482 EMNKMNMNTELE-----DCLQLLDDGEAVEDEPRSLASCLRAFATTEILSAPNTYECEKC 536
Query: 888 LVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQ--DARGRL--S 943
V N +++ + + K +A KR LI + PP+LT+HLKRF Q GR+
Sbjct: 537 CVPYN--------KQLRNGMKKRTVEAEKRYLIYEPPPVLTLHLKRFEQTHSVSGRVITR 588
Query: 944 KLNGHVNFSEIINLRPYMDPGCTD--------HDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
K+ G ++F +I+N+ P+ CT Y L GVV H G + GHYVA+++
Sbjct: 589 KVPGQISFPKILNIAPF----CTQIAKRIEKGLKQVCYSLYGVVSHSGDLSSGHYVAFIK 644
Query: 996 G--------------------------GPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
P + +E G WY+ASD+ V VS V
Sbjct: 645 NRYPSSQTEKFFYEAANLSPPDSITSCSPSELKEIIEEPCDGEWYYASDMRVSSVSESRV 704
Query: 1030 LRCEAYILFYEKI 1042
L EAY+LFYE+I
Sbjct: 705 LGAEAYVLFYERI 717
>gi|312070398|ref|XP_003138128.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 758
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 154/349 (44%), Gaps = 71/349 (20%)
Query: 106 AIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR----HPLVIQWENPHLRWCFPCNTLI 161
++W+C+ C + C ++H + H R R HPL E R CF C I
Sbjct: 80 SVWICVTCSYSGCD-------EKNHTLDHFRALRTGTEHPLFFAVEGKQFR-CFSCEKRI 131
Query: 162 PVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--------- 212
V + EE+G K L++ IK + +I+ ++ + G NS + E
Sbjct: 132 DVAE-EESGSIKAFLNDYNSFIKPK-LKINPLESQSMKSGGTKRNSSLTGEIDSKKNENS 189
Query: 213 -STVVSGSDLDGN---ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL------NAE 262
++ S + N V+GLANLGNTCFFNS+ Q LL L Y N E
Sbjct: 190 NEKCLTESKMKNNERKTLLPVKGLANLGNTCFFNSITQCLLHTHTLAVYINLIGREDNIE 249
Query: 263 LTFGPLTIA-------------------LKKLFAETKPETGLRNVINPRSFFGCICSKAP 303
L + I L +FA + I+P S F I KAP
Sbjct: 250 LMQNKVLIGDKLVQVPHVYLSLASFDGPLNNIFANFIRDFKAGLAIHPSSLFSEIARKAP 309
Query: 304 QFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------SPSEGN-------------GIS 344
+F+G+ Q D+HELLR L+DGL +EE+ K + + GN G+
Sbjct: 310 RFRGWAQQDAHELLRYLMDGLRTEEINRYKESISRYIKTARNGNPKLTDGELSLLAKGML 369
Query: 345 SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS 393
G +D VFGG + TV+C +CGH S YE FLDLSLP+P+ A +
Sbjct: 370 KACGRPLIDAVFGGTLLQTVKCSDCGHLSKTYEDFLDLSLPLPSTSAKT 418
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 118/274 (43%), Gaps = 78/274 (28%)
Query: 830 EKGKMKINDAVEMQSRSSCLRDSCSQESITDQDE--GSCSVDGATSSGYSAEKVYQSDSQ 887
E KM +N +E CL+ E++ D+ SC AT+ SA Y+ +
Sbjct: 501 EMNKMNMNTELE-----DCLQLLDDGEAVEDEPRSLASCLRAFATTEILSAPNTYECEKC 555
Query: 888 LVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQ--DARGRL--S 943
V N +++ + + K +A KR LI + PP+LT+HLKRF Q GR+
Sbjct: 556 CVPYN--------KQLRNGMKKRTVEAEKRYLIYEPPPVLTLHLKRFEQTHSVSGRVITR 607
Query: 944 KLNGHVNFSEIINLRPYMDPGCTD--------HDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
K+ G ++F +I+N+ P+ CT Y L GVV H G + GHYVA+++
Sbjct: 608 KVPGQISFPKILNIAPF----CTQIAKRIEKGLKQVCYSLYGVVSHSGDLSSGHYVAFIK 663
Query: 996 G--------------------------GPK-------------NKVKAK--------KES 1008
P +KV+++ +E
Sbjct: 664 NRYPSSQTEKFFYEAANLSPPDSITSCSPSELKELDLVFVSYFHKVRSEIMAAIWIIEEP 723
Query: 1009 VGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ASD+ V VS VL EAY+LFYE+I
Sbjct: 724 CDGEWYYASDMRVSSVSESRVLGAEAYVLFYERI 757
>gi|327261484|ref|XP_003215560.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 45-like [Anolis carolinensis]
Length = 811
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 177/400 (44%), Gaps = 77/400 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + +D + + + + C +C + +RR G+ V IW+
Sbjct: 38 CQHVSQAVDVHNVKRTVAQNLWLVCTEC---LKERRICDGEP----------VMPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG C + H ++H + + H +VI + + WC+ CN +
Sbjct: 85 CLKCGIQGCS----QNSEGQHSLKHFQTAQVEPHCIVINL-STWIVWCYECNEELSTHC- 138
Query: 167 EENGENKDALSEVVKLIK---GRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
NK AL+++V ++ R+ SS V W ++ E + ++ G ++
Sbjct: 139 -----NKKALAQIVDFLQRHVARNESSSSSKV--IW-----LHEENNEANDILKGKGVNS 186
Query: 224 NACYV-VRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------LNAELTFGPLTIAL 272
+ V V+G+ NLGNTCFFN+VMQNL L + N PL + L
Sbjct: 187 SWASVPVKGINNLGNTCFFNAVMQNLAQTHMLNEXMKEKGTKLKIGQNPASQLDPLVVNL 246
Query: 273 KK---------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
LF + E G + ++P+ F +C KAP+FKGYQQ DS E+L LLD
Sbjct: 247 SSPGSLTSAMFLFLHSMKEIG-KGPLSPKVLFNQLCQKAPRFKGYQQQDSQEVLHYLLDA 305
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ EE + N+P+ + V F+D +F G++ ST+ C
Sbjct: 306 MRIEETKRVQAAILKAFNNPTTKTADEETKRKVKAYGREGVKMNFIDRIFVGELTSTIMC 365
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
EC + STV EPF+DLSLP+ ++ K P R K+K
Sbjct: 366 EECENISTVKEPFIDLSLPIIEERI--SKPVPFGRTSKSK 403
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 109/210 (51%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ T E CSV S E + +++L+ NC + K ++ ++ I K
Sbjct: 605 SQSYTTSSKE--CSVQSCLYQFTSVE-LLMGNNKLLCENCTDRKQKYQKKSNTIEKKTEG 661
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC---T 966
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C T
Sbjct: 662 VYTNARKQLLISSVPAVLVLHLKRFHQ-AGVSLRKVNRHVDFPLVLDLAPFCSAFCKNVT 720
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNK----------VKAKKESVG---GV 1012
D Y L G+VEH G+MRGGHY AYV+ P K V+ KES G G
Sbjct: 721 DGGKVLYALYGIVEHSGSMRGGHYAAYVKVRSPSKKLLEHISSNKNVQGLKESGGASIGQ 780
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W SD +V+ V VL +AY+LFYE++
Sbjct: 781 WVFVSDTHVQAVPESRVLNSQAYLLFYERM 810
>gi|402867737|ref|XP_003897993.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 1
[Papio anubis]
gi|402867739|ref|XP_003897994.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 2
[Papio anubis]
Length = 815
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 169/380 (44%), Gaps = 75/380 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ V IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQP----------VLPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + WC+ C+ EK
Sbjct: 85 CLKCGFQGCGK----NSESQHSLKHFKNSRIEPHCIIINLST-WIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G +
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIKKGG-KGRSL 187
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAELT 264
VRG+ NLGNTCFFN+VMQNL L D L EL+
Sbjct: 188 SSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVELS 247
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL LF + ET + ++P F +C KAP+FK +QQ DS ELL LLD
Sbjct: 248 RPGPLTSALF-LFLHSMKETE-KGPLSPSVLFNQLCQKAPRFKDFQQQDSQELLHYLLDA 305
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ +EE + N+P+ + V F+D +F G++ STV C
Sbjct: 306 VRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMC 365
Query: 367 VECGHSSTVYEPFLDLSLPV 386
EC + STV +PF+D+SLP+
Sbjct: 366 EECANISTVKDPFIDISLPI 385
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CSV +++ ++ +++L+ NC + K +E S K+
Sbjct: 607 TLSQTYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKV 663
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 664 EGVYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKN 722
Query: 968 H---DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVK---AKKESVGGV-------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK+SV G+
Sbjct: 723 ASMGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHPTKKKSVPGLKEADSESA 782
Query: 1013 --WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE++
Sbjct: 783 GQWVHVSDTYVQVVPESRALSAQAYLLFYERV 814
>gi|449497841|ref|XP_002196926.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Taeniopygia
guttata]
Length = 817
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 175/403 (43%), Gaps = 82/403 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + +D + + S C +C + +RR G+ G+ IW+
Sbjct: 37 CQHVSQAVDMHHVKRAVAQSVWSICAEC---LKERRVSDGE------PGAP----SDIWL 83
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRH---ARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG C + H ++H AR H +VI + WC+ C+ +
Sbjct: 84 CLKCGSQGCS----KNSEGQHSLKHFQTARTEPHCIVINLST-WIIWCYECDEELSTHC- 137
Query: 167 EENGENKDALSEVVKLIK--GRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGN 224
NK L+++V ++ G E SS + + E S ++ G
Sbjct: 138 -----NKKVLAQIVDFLQKHGARAEPSSSKI-------IRLREENSETSEILKGKTSGNG 185
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAM------------------------SQLQDYFLN 260
A V+G+ NLGNTCFFN+VMQNL SQL +N
Sbjct: 186 ASVPVKGINNLGNTCFFNAVMQNLAQTHVLNELMYEIKEKGTKLKICHTSDSQLDPLVVN 245
Query: 261 AELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
+ GPLT A+ LF + E G + ++P+ F +C KAP+FKG+QQ DS ELL L
Sbjct: 246 LS-SPGPLTSAMF-LFLHSMREAG-KGPLSPKVLFSQLCQKAPRFKGFQQQDSQELLHYL 302
Query: 321 LDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAST 363
LD + EE + N+P+ + V F+D +F G++ ST
Sbjct: 303 LDAIRIEETKRIQTGILKAFNNPTTKTADEETRRKVKAYGREGVKMNFIDRIFVGELTST 362
Query: 364 VRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
V C EC + STV EPF+DLSLP+ ++ K P R K+K
Sbjct: 363 VMCEECENISTVKEPFIDLSLPIIEERVA--KPVPLGRTGKSK 403
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEE----INSKIVK 909
SQ IT E CSV S E + +++L+ +C + K ++ K+
Sbjct: 610 SQSYITSSKE--CSVQSCLYQFTSVE-LLMGNNKLLCESCTERKQKYQKKTNSTEKKMEG 666
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC---T 966
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F I++L P+ C
Sbjct: 667 VYTNARKQLLISSVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLILDLAPFCAASCKNVM 725
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK-----------VKAKKESV---GGV 1012
D Y L G+VEH G+MRGGHY AYV+ +K V KE++ GG
Sbjct: 726 DGARVLYSLYGIVEHSGSMRGGHYAAYVKVRTSSKKLLEHISTTKSVLGLKEAMGASGGQ 785
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W + SD +V+ V VL +AY+LFYE++
Sbjct: 786 WVYVSDTHVQMVPESRVLNAQAYLLFYERL 815
>gi|90082647|dbj|BAE90505.1| unnamed protein product [Macaca fascicularis]
Length = 400
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 173/389 (44%), Gaps = 75/389 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ V IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQP----------VLPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + WC+ C+ EK
Sbjct: 85 CLKCGFQGCGK----NSESQHSLKHFKNSRIEPHCIIINLST-WIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G +
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIKKGG-KGRSL 187
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAELT 264
VRG+ NLGNTCFFN+VMQNL L D L EL+
Sbjct: 188 SSVRGITNLGNTCFFNAVMQNLAQTYTLTDRMNEIKESSTKLKIFPSSDSQLDPLVVELS 247
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL LF + ET + ++P F +C KAP+FK +QQ DS ELL LLD
Sbjct: 248 RPGPLTSALF-LFLHSMKETE-KGPLSPNVLFNQLCQKAPRFKDFQQQDSQELLHYLLDA 305
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ +EE + N+P+ + V F+D +F G++ STV C
Sbjct: 306 VRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMC 365
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
EC + STV +PF+D+SLP+ ++ +K
Sbjct: 366 EECANISTVKDPFIDISLPIIEERVRRRK 394
>gi|109072157|ref|XP_001085248.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 3
[Macaca mulatta]
Length = 815
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 170/380 (44%), Gaps = 75/380 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ V IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQP----------VLPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCGK----NSESQHSLKHFKNSRIEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G +
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIKKGG-KGRSL 187
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAELT 264
VRG+ NLGNTCFFN+VMQNL L D L EL+
Sbjct: 188 SSVRGITNLGNTCFFNAVMQNLAQTYTLTDRMNEIKESSTKLKIFPSSDSQLDPLVVELS 247
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL LF + ET + ++P F +C KAP+FK +QQ DS ELL LLD
Sbjct: 248 RPGPLTSALF-LFLHSMKETE-KGPLSPNVLFNQLCQKAPRFKDFQQQDSQELLHYLLDA 305
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ +EE + N+P+ + V F+D +F G++ STV C
Sbjct: 306 VRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMC 365
Query: 367 VECGHSSTVYEPFLDLSLPV 386
EC + STV +PF+D+SLP+
Sbjct: 366 EECANISTVKDPFIDISLPI 385
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CSV +++ ++ +++L+ NC + K +E S K+
Sbjct: 607 TLSQTYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKV 663
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 664 EGVYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKN 722
Query: 968 H---DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVK---AKKESVGGV-------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK+SV G+
Sbjct: 723 ASMGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHPTKKKSVPGLKEADSESA 782
Query: 1013 --WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE++
Sbjct: 783 GQWVHVSDTYVQVVPESRALSAQAYLLFYERV 814
>gi|355748771|gb|EHH53254.1| hypothetical protein EGM_13859, partial [Macaca fascicularis]
Length = 774
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 170/380 (44%), Gaps = 75/380 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ V IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQP----------VLPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCGK----NSESQHSLKHFKNSRIEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G +
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIKKGG-KGRSL 187
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAELT 264
VRG+ NLGNTCFFN+VMQNL L D L EL+
Sbjct: 188 SSVRGITNLGNTCFFNAVMQNLAQTYTLTDRMNEIKESSTKLKIFPSSDSQLDPLVVELS 247
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL LF + ET + ++P F +C KAP+FK +QQ DS ELL LLD
Sbjct: 248 RPGPLTSALF-LFLHSMKETE-KGPLSPNVLFNQLCQKAPRFKDFQQQDSQELLHYLLDA 305
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ +EE + N+P+ + V F+D +F G++ STV C
Sbjct: 306 VRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMC 365
Query: 367 VECGHSSTVYEPFLDLSLPV 386
EC + STV +PF+D+SLP+
Sbjct: 366 EECANISTVKDPFIDISLPI 385
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ IT E CSV S E + +++L+ NC + K +E S K+
Sbjct: 609 SQTYITTSKE--CSVQSCLYQFTSME-LLMGNNKLLCENCTKNKQKYQEETSFAEKKVEG 665
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 666 VYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNAS 724
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVK---AKKESVGGV 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK+SV G+
Sbjct: 725 MGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHPTKKKSVPGM 774
>gi|348532107|ref|XP_003453548.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like
[Oreochromis niloticus]
Length = 808
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 174/403 (43%), Gaps = 82/403 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + +D + + + SS C +C + +R G+ S+ I V
Sbjct: 38 CQHVSRAVDLNSVKKSVLSSVWSVCSEC---LKERTMIDGEP----------AASQDILV 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHP----LVIQ---WENPHLRWCFPCNTLIP 162
CL CG C G+ HVV+H +Q HP + I W+ WCF C+ +
Sbjct: 85 CLKCGFQGCNQSGI-----QHVVKH-QQAFHPESHCITISLSTWKA----WCFECSEELS 134
Query: 163 VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLD 222
NK AL++ + ++ S + +SV + + E + G
Sbjct: 135 THC------NKKALAQSLDFLQKHSVKATSVSPKII-----KLREEPPDYADPPKGKSSV 183
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQD---------YFLNA----ELTFGPLT 269
+A V+G+ NLGNTCFFN+VMQNL L D Y L E PLT
Sbjct: 184 SSALVPVKGINNLGNTCFFNAVMQNLSQTHMLIDLIQEVKEKGYKLRICPPPETNLSPLT 243
Query: 270 IALKK---------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
+ L F + G + +NP+ F +C KAP FKGYQQ DS ELL L
Sbjct: 244 VVLPSPEPLTAAMFAFLHNMKDPG-KGCVNPKILFNQLCQKAPCFKGYQQQDSQELLHYL 302
Query: 321 LDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAST 363
LD + EE + N+P+E + V FVD +F G++ +T
Sbjct: 303 LDSIRVEETKRVKAGILKAFNNPTEKTADEETKRQVKAYGKEGVKMNFVDRIFVGELTNT 362
Query: 364 VRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
+ C EC H STV E F+D+SLP+ ++ SK + P K T+
Sbjct: 363 IMCEECEHISTVKEAFIDISLPIIEERI-SKPSNPGRLGKGTR 404
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 103/181 (56%), Gaps = 26/181 (14%)
Query: 887 QLVAGN----CES-EESKVEEI------NSKIVKVKRDATKRVLINKAPPILTIHLKRFS 935
+L+ GN CES E +++++ + K+ KV A K++LI+ PP++T+HLKRF
Sbjct: 628 ELLMGNNRLLCESCTERRMKQLRKSSSADKKVEKVYTSARKQMLISSLPPVITLHLKRFH 687
Query: 936 QDARGRLSKLNGHVNFSEIINLRPYMDPGCTD---HDNYDYRLVGVVEHLGTMRGGHYVA 992
Q A L K+N HV+F I++L P+ C + + Y L G+VEH G+MRGGHY A
Sbjct: 688 Q-AGMNLRKVNRHVDFPLILDLAPFCSASCKNLAAGERVLYSLYGIVEHSGSMRGGHYTA 746
Query: 993 YVR-GGPKNKVKAKKESVGGV----------WYHASDVYVREVSLEEVLRCEAYILFYEK 1041
YV+ P+ K + + +++ G W + SD V+ V VL +AY+LFYE+
Sbjct: 747 YVKVRAPQRKTEQQHKNLSGARDTCSSSQGQWVYVSDTTVQMVPESRVLNSQAYLLFYEE 806
Query: 1042 I 1042
I
Sbjct: 807 I 807
>gi|241997576|ref|XP_002433437.1| USP16, putative [Ixodes scapularis]
gi|215490860|gb|EEC00501.1| USP16, putative [Ixodes scapularis]
Length = 635
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 155/374 (41%), Gaps = 92/374 (24%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLI-- 161
IWVCL CGH CG P H V HA +T H L + ++ L WC+ C+ +
Sbjct: 76 IWVCLQCGHRGCG----TKWPGRHAVCHAERTYSDSHALALSSQSMEL-WCYKCDRTVEA 130
Query: 162 ---------PVEKTEENGENKD------------ALSEVVKLIKGRSTEISSVDVEDAWF 200
+ K G K + E + R TE+S V+V
Sbjct: 131 SSQVVQIVGAIRKKLTTGTKKSPQSTSARNSSSSSTEEPRAVENDRPTEVSRVEVAVGTK 190
Query: 201 GSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQ---------NLLAM 251
+ S K E T V+G + V+GL+NLGNTC+FN+VMQ LLA
Sbjct: 191 DEPTLAS--KPELTTVAGKWV------TVKGLSNLGNTCYFNAVMQCLSQTPALDELLAK 242
Query: 252 SQLQDYFLNAELTFGP------------------LTIALKKLFAETKPETGLRNVINPRS 293
D E + P LT AL E + + V P
Sbjct: 243 RCSNDLHCTFEPSIAPAAEGDPGPLEVKLPGPGFLTSALALFLREMR-----QGVPRPGQ 297
Query: 294 FFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGP---- 349
F +C APQF+G+ QHDSHELLR LL+G+ SEE+ R + G+SS P
Sbjct: 298 LFSRLCQAAPQFRGHHQHDSHELLRHLLEGVRSEEVK-RHMQAVLNAFGLSSKVNPRQVG 356
Query: 350 ----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS 393
V +D +FGG + ST+ C +CG S +PF DLSLP+P KAP
Sbjct: 357 TDTKAKVQAYKKAVSRVALDDIFGGLLLSTLICQQCGQVSRREDPFQDLSLPIPEDKAPR 416
Query: 394 KKTQPASRAKKTKL 407
+ K KL
Sbjct: 417 NVHAGHGKRAKGKL 430
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 70/131 (53%), Gaps = 22/131 (16%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMD---PGCTDHDN 970
A+ ++ + + P +LT+HLKRF Q + L K+ HV F ++L PY GC
Sbjct: 518 ASLQLQVLQPPRVLTLHLKRFQQGSS--LRKVQRHVAFPVELDLGPYCSGQAEGCKS--- 572
Query: 971 YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
Y L GVVEH G M GGHYVAYVRG GG W++ASD V +VL
Sbjct: 573 --YTLYGVVEHSGRMTGGHYVAYVRG------------AGGGWFYASDGRVAPAPQRKVL 618
Query: 1031 RCEAYILFYEK 1041
+AY+LFY +
Sbjct: 619 ASQAYLLFYGR 629
>gi|344264591|ref|XP_003404375.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Loxodonta
africana]
Length = 819
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 169/384 (44%), Gaps = 83/384 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + + + + + C +C + +RR G V IW+
Sbjct: 38 CQHVSHAVSVNHVKTAVAENPWSVCSEC---LKERRFHDGHP----------VLPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQ---WENPHLRWCFPCNTLIPV 163
CL CG CG + H ++H + +R H ++I W + WC+ C+ +
Sbjct: 85 CLKCGFQGCGK----NSESQHSLKHFKSSRTEPHCIIISLSTW----IIWCYECDQKLST 136
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSES-TVVSGSDLD 222
NK AL+++V ++ ++ + + F E K E+ ++ G +
Sbjct: 137 HC------NKKALAQIVDFLQKHVSK-----TQTSTFSRSIKLCEEKCETGEIIQGGE-- 183
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LN 260
+ V+G+ NLGNTCFFN+VMQNL L D L
Sbjct: 184 DSRVTSVKGITNLGNTCFFNAVMQNLAQTYILTDLMNEIKENGTKLKIFPSSDSQLAPLM 243
Query: 261 AELTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
EL+ GPLT AL LF + ET R ++P+ F +C KAP+FKG+QQ DS ELL
Sbjct: 244 VELSSPGPLTSALF-LFLHSMKETE-RGPLSPKVLFNQLCHKAPRFKGFQQQDSQELLHY 301
Query: 320 LLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAS 362
LLD + EE + N+P+ + V F+D +F G++ S
Sbjct: 302 LLDAVRIEETKRIQASILKAFNNPTTKTADDETRKKVRAYGKEGVKMNFIDRIFIGELTS 361
Query: 363 TVRCVECGHSSTVYEPFLDLSLPV 386
TV C EC + S + +PF+D+SLP+
Sbjct: 362 TVMCEECANVSMMKDPFIDISLPI 385
Score = 112 bits (281), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 109/210 (51%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ +T E CS+ +++ ++ +++L+ NC ++ K ++ S K
Sbjct: 613 SQSYVTTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTEKKQKYQKETSSAEKKAEG 669
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 670 VYTNARKQLLISAVPAILILHLKRF-QQAGWSLRKVNRHVDFPLMLDLAPFCSATCKNVS 728
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKN--KVKAKKESVGGV 1012
D Y L GVVEH G+M+GGHY AYV+ G KN +K + G
Sbjct: 729 VGDKVLYGLYGVVEHSGSMKGGHYTAYVKVRTPSKILPEHITGKKNVPGLKESESESTGQ 788
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 789 WVHVSDTYVQVVPESRALSAQAYLLFYERI 818
>gi|357142012|ref|XP_003572428.1| PREDICTED: uncharacterized protein LOC100832053 [Brachypodium
distachyon]
Length = 1040
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDY 973
AT+ +L+ K PP+LTI LKR+ D L+K+ GHV+F EI+++ P+MDP C D + Y
Sbjct: 918 ATQTILLTKLPPVLTIQLKRYKDD----LTKMRGHVSFKEILDVGPFMDPSCEDKGDSRY 973
Query: 974 RLVGVVEHLGT-MRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
RLVGV+EHLG + GGHY+AYVR G ++ S W A+D + +VSL+EVLRC
Sbjct: 974 RLVGVIEHLGANLGGGHYIAYVRAGCN-----EQSSGASSWVCANDHNISQVSLQEVLRC 1028
Query: 1033 EAYILFYEKI 1042
EAY+LFYE++
Sbjct: 1029 EAYVLFYERM 1038
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 222 DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKP 281
+GN YV++G+ NLG+TC+ N+ +Q LLA+ +L+ L + G + + LK+LF
Sbjct: 518 NGNG-YVIKGIPNLGSTCYMNASLQCLLALGKLRTMILRPDARLGIIGLHLKQLFDAGTN 576
Query: 282 ETGLRNVINPRSFFGCICSKAP-QFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
++ R +++PR + S + QF G DSH+ L LL L E K+N
Sbjct: 577 DS--RRMLDPRKLLDAMKSSSDMQFMGMGMQDSHDFLTYLLSALDKE---VHKQNEVYSR 631
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL--SLPVPTKKAPSKKTQP 398
G + + P F D +F GQ T+ C C + S + F DL ++ +P+K P++
Sbjct: 632 RGFT--EFPKFGDSIFKGQQCQTLSCKSCPNKSVSHGKFHDLQPAVALPSKDPPARSVTS 689
Query: 399 ASRAKKTKLPPK 410
+ R++ + P K
Sbjct: 690 SLRSENGRSPKK 701
Score = 43.1 bits (100), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 103 DSKAIWVCLGCGHYACGGV-GLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLI 161
++ + +C C Y C G G PQ H HA+Q +H +++ ++ P+ +CF C ++
Sbjct: 315 ENAGMMLCTECSSYFCTGPEGDRENPQGHASWHAKQFQHWVLLWYDEPYKGYCFECRQVL 374
Query: 162 PVEKTEE-----NGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVV 216
+ E G KD V G S ++ + AW G V S S +V
Sbjct: 375 RLSVDENACAMVAGNGKDEWGMVAGNGNGVSGMVAG-NGNGAW---GTVASNRNSVWGMV 430
Query: 217 SGSD------LDGNACYVVRGLANLGN 237
+G+ L GN V+ L GN
Sbjct: 431 TGNGNGVLGMLTGNGNGVLGMLTGNGN 457
>gi|403261075|ref|XP_003922960.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Saimiri
boliviensis boliviensis]
Length = 816
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 168/379 (44%), Gaps = 73/379 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + + + I + C +C + +RR G+ V IW+
Sbjct: 38 CQHVSHAVSVNHVKRAIAENLWSVCSEC---LKERRFCDGQP----------VLPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQ--TRHPLVIQWENPHLRWCFPCNTLIPVEKTE 167
CL CG CG + H ++H + T H +I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCGK----NSESQHSLKHFKSYGTEHHCIIISLSTWIIWCYECD-----EKLS 135
Query: 168 ENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACY 227
+ NK L+++V ++ +++ + + F SE K E+ + G +
Sbjct: 136 THC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLSEEKCETDEIKKEG-KGRSLS 188
Query: 228 VVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAELTF 265
VRGL NLGNTCFFN+VMQNL L D L EL+
Sbjct: 189 SVRGLTNLGNTCFFNAVMQNLAQTYILTDLMNEIKENSTKLKIFPSSDSQLDPLVVELSR 248
Query: 266 -GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL 324
GPLT AL LF + ET + ++P+ F +C KAP+FK +Q DS ELL LLD +
Sbjct: 249 PGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDLRQQDSQELLHYLLDAV 306
Query: 325 CSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRCV 367
+EE + N+P+ + V F+D +F G++ STV C
Sbjct: 307 RTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMCE 366
Query: 368 ECGHSSTVYEPFLDLSLPV 386
EC + S V +PF+D+SLP+
Sbjct: 367 ECANISMVKDPFIDISLPI 385
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 111/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ +T E CSV +++ ++ +++L+ NC + K +E S K+
Sbjct: 610 SQSYVTASKE--CSVQSCLYQ-FTSMELLIGNNKLLCENCTENKQKYQEETSLAEKKVEG 666
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 667 VYTNARKQLLISAIPVVLILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCSATCKNAS 725
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVK---AKKESVGGV---------- 1012
D Y L G+VEH G+MRGGHY AYVR P K+ KK++V G+
Sbjct: 726 MGDKVLYGLYGIVEHSGSMRGGHYTAYVRVRTPSRKLLEHITKKKNVPGLKEADSESAGQ 785
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE++
Sbjct: 786 WVHISDTYVQVVPESRALSAQAYLLFYERV 815
>gi|355747429|gb|EHH51926.1| Ubiquitin carboxyl-terminal hydrolase 16 [Macaca fascicularis]
Length = 775
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 166/343 (48%), Gaps = 49/343 (14%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYICDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEI--SSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQAGITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPE 282
+ V+GL+NLGNTCFFN+VMQ L +N E GPLT+A+ + E + E
Sbjct: 189 SPSQITVKGLSNLGNTCFFNAVMQEPLE--------INLEPP-GPLTLAMSQFLNEMQ-E 238
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR-------N 335
T + ++ P+ F +C KA +FKGYQQ DS ELLR LLDG+ +EE + N
Sbjct: 239 TK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGMRAEEHQRVSKGILKAFGN 297
Query: 336 SPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVEC 369
S + + N+ P FVD +FGG++ ST+ C +C
Sbjct: 298 STEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTSTIMCDQC 340
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 628 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 686
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 687 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 746
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 747 HISDTHVQAVPTTKVLNSQAYLLFYERI 774
>gi|242079885|ref|XP_002444711.1| hypothetical protein SORBIDRAFT_07g026460 [Sorghum bicolor]
gi|241941061|gb|EES14206.1| hypothetical protein SORBIDRAFT_07g026460 [Sorghum bicolor]
Length = 852
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 181/401 (45%), Gaps = 60/401 (14%)
Query: 60 DKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACG 119
D +S+ + S D C+DC G G+ K+ + I VCL CG ++CG
Sbjct: 66 DILSLSLLSDDAGICKDCSR----EEGASGQPKYHR-----------ILVCLECGRHSCG 110
Query: 120 GVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEV 179
+ P H HARQ +H + +++P CF C PV E D L +
Sbjct: 111 DLR-SYLPYGHARDHARQEQHWVAALFDDPQTGLCFKCECERPVYP-----EPDDELGMI 164
Query: 180 VKLIKG--------------RSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
IK +TE+ +++ DAW +E+ S + G
Sbjct: 165 FNEIKADGSGHAFGFNMPCDLATEL--LNLRDAWQWHA---AELISANAQEQG------- 212
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGL 285
Y ++G+ N GNTC+ N+++Q LLA+ +L+ L + G + +AL++LF E
Sbjct: 213 -YAIKGMPNCGNTCYMNAMVQCLLALDKLRARMLGPDPPPGDIGMALRELFVEVSTIDSA 271
Query: 286 RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISS 345
++NP + A +++GY+ HDS+ELL L + L EE +P G
Sbjct: 272 GGLLNPDKLLRIVRLYASKYEGYKMHDSYELLESLRNALQDEENGIE---TPCRERG--- 325
Query: 346 NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKT 405
P VD +F G++ C+ C +ST + F DLSL +P+K+ SK + + T
Sbjct: 326 -GDPTVVDSIFRGELFERRSCLYCQSASTFHGYFWDLSLSLPSKENLSKSLKSQQKKTAT 384
Query: 406 KLPP---KKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSL 443
+L G+I AK + D+H + ++ +++L + S +
Sbjct: 385 ELLSVNMSNLGKINAK-SGDSHLLVSE-LNDLVVDKTSDHM 423
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDY 973
A ++ I K PP+LT+HLKR+ ++ K HV F E++++ +MD D +N Y
Sbjct: 698 AIQKPHIMKLPPVLTLHLKRYIKNG-NEYHKNEAHVMFKEVLDVGRFMDSRSVDKNNTIY 756
Query: 974 RLVGVVEHLG--TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR 1031
RL VVEH G M GHYVAYVR K + + ++ S W+ A D +REV+LEEVL+
Sbjct: 757 RLAAVVEHRGGPFMNVGHYVAYVRAS-KIRNQQQQSSNSSSWFCADDSNIREVTLEEVLK 815
Query: 1032 CEAYILFYEKI 1042
C+ Y+LFYE +
Sbjct: 816 CQPYVLFYEMM 826
>gi|413921623|gb|AFW61555.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 828
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 157/362 (43%), Gaps = 43/362 (11%)
Query: 59 SDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYAC 118
+D + + S D C+DCR RR ++ G G+ + I VCL CG ++C
Sbjct: 68 NDILISSLLSDDAGNCQDCR----GRRREEADGPGGRPM------YRRIMVCLECGRHSC 117
Query: 119 GGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPV-----EKTEENGE-- 171
G P H HA Q +H + +++P +CF C +PV E GE
Sbjct: 118 GD-STSYIPYGHAQDHANQEKHWVAAMFDDPQAGFCFKCEHEVPVYPEPDEMEMITGEIQ 176
Query: 172 ---NKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYV 228
R +++ DAW + ++ S + ++ Y
Sbjct: 177 AGGGGGGGGHAFGFDMSRDLATVLLNLGDAWCAAADLGS-VNAQG-------------YA 222
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNV 288
+RG+ N GNTC+ N+++Q LLA+ +L+ L + G L +ALK+LF E +
Sbjct: 223 IRGMPNRGNTCYMNAMVQCLLALDKLRARMLGPDTPPGHLGMALKELFVEASAAGSAGGM 282
Query: 289 INPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQG 348
+NP + A +++ Y HDS+ELL L L EE + +P G
Sbjct: 283 LNPDKLLRSVRLHAGKYEPYTMHDSYELLESLRSALHDEEEGIQ---APYRERG-----A 334
Query: 349 PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLP 408
P +D VF G++ T C +C +S + F +LSL +P+K+ + +S+ L
Sbjct: 335 PTVIDAVFKGELCDTRSCKDCQSASAFHGEFWELSLSLPSKEDLCENFASSSQRASKNLN 394
Query: 409 PK 410
P+
Sbjct: 395 PQ 396
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDY 973
A +R I K PP+LT+HLKR+ ++ K V++ E +++ +M+ D + Y
Sbjct: 695 AIQRTNITKLPPVLTLHLKRYFKNG-NEYHKNEARVSYKEHLDVGRFMNSSSADKSSTVY 753
Query: 974 RLVGVVEHLG--TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR 1031
RL GVVEH G M GHYVAYVR K ++ S W+ A D VREV+LEEVL
Sbjct: 754 RLAGVVEHRGGPFMNAGHYVAYVRARKIGKQSSRPSS----WFCADDSNVREVALEEVLE 809
Query: 1032 CEAYILFYEKI 1042
+AY+LFYE++
Sbjct: 810 RKAYVLFYERV 820
>gi|170586622|ref|XP_001898078.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158594473|gb|EDP33057.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 778
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 155/348 (44%), Gaps = 69/348 (19%)
Query: 106 AIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR----HPLVIQWENPHLRWCFPCNTLI 161
++W+C+ C + C ++H + H R +R HPL E R CF C I
Sbjct: 121 SMWICVTCSYSGCD-------EKNHTLNHFRASRTGTEHPLFFAVEGKQFR-CFSCEKRI 172
Query: 162 PVEKTEENGENKDALSEVVKLIKGR-------STEISSVDVEDAWFGSGNVNSEIKSEST 214
V + EE G K +++ IK + S + S + + G ++S+ K S
Sbjct: 173 DVAE-EEGGSVKAFINDYNSFIKPKLKTDPSESQLMKSNNTKRNSSIIGKIDSKKKENSN 231
Query: 215 --VVSGSDLDGN---ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL------NAEL 263
++ S + N V+GL NLGNTCFFNS+ Q LL L Y N EL
Sbjct: 232 EKCLTKSKMKNNEKKTLLPVKGLGNLGNTCFFNSITQCLLHTHTLAVYIDLVGKEDNIEL 291
Query: 264 TFGPLTIA-------------------LKKLFAETKPETGLRNVINPRSFFGCICSKAPQ 304
+ I L +FA + ++P S F I KAP+
Sbjct: 292 MQNKVLIGDRQVQVPHVYLSLASFDGPLNNIFANFIRDFKAGLPVHPSSLFSEIARKAPR 351
Query: 305 FKGYQQHDSHELLRCLLDGLCSEELAFRK----------RN-----SPSE----GNGISS 345
F+G+ Q D+HELLR L+DGL +EE+ K RN + SE G+
Sbjct: 352 FRGWAQQDAHELLRYLMDGLRTEEINRYKEAISRYIKLARNGNPKLTDSELSLLAKGMLK 411
Query: 346 NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS 393
G +D VFGG + TV+C +CGH S YE FLDLSLP+P+ A +
Sbjct: 412 ACGRPLIDAVFGGTLLQTVKCSKCGHLSKTYEDFLDLSLPLPSTSAKT 459
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 42/168 (25%)
Query: 913 DATKRVLINKAPPILTIHLKRFSQ--DARGRL--SKLNGHVNFSEIINLRPYMDPGCTD- 967
+A KR LI + PP+LT+HLKRF Q GR+ K+ G ++F +I+N+ P+ CT
Sbjct: 614 EAEKRYLIYEPPPVLTLHLKRFEQTHSVSGRVITRKVPGQISFPKILNIAPF----CTQI 669
Query: 968 -------HDNYDYRLVGVVEHLGTMRGGHYVAYVRG-----------------GPKNKVK 1003
Y L GVV H G + GHYVA+++ P + V
Sbjct: 670 AKRIEKGLKKVCYSLYGVVSHFGDLSSGHYVAFIKNRYPSSQTEKFFYESANLSPPDSVV 729
Query: 1004 AKKES---------VGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
S G WY+ASD+ V VS VL EAY+LFYE+I
Sbjct: 730 TCSASELKEIIEGPCDGEWYYASDMSVSSVSESRVLSTEAYVLFYERI 777
>gi|328874064|gb|EGG22430.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 960
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 21/187 (11%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFGPLTIALKKLFAETKP 281
++GL NLGNTCFFNSV+QNL ++ L+D FL + + +T+ + F +
Sbjct: 144 IKGLQNLGNTCFFNSVLQNLTHVNMLRDAFLEFPGEEKSTIKSTNQMTMEMHHFFLKMYK 203
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
+ ++++P I K+P+F+G +Q DSHELLR LLDGL SEE +
Sbjct: 204 QPS--SIVSPSGLLSEISKKSPRFRGGKQQDSHELLRYLLDGLISEEQS----------- 250
Query: 342 GISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASR 401
++ + P ++D +FGG++ S + C CG+ S YEPFLDLSLP+P + K +P
Sbjct: 251 ASTNKRDPTYIDRIFGGRLISIITCFHCGNVSKTYEPFLDLSLPLPMLAVAADK-RPLPS 309
Query: 402 AKKTKLP 408
+ + LP
Sbjct: 310 IQNSPLP 316
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 13/135 (9%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC--TD 967
++R+A+K+ L++ PP LT+HLKRF Q G L K + H++F ++L P+ DP C T
Sbjct: 735 IRRNASKQYLLSTTPPYLTVHLKRFMQTRNGGLQKNSKHIHFPHYLDLTPFTDPTCPKTS 794
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L GVVEH+G+M GGHYVA++ E WY+ SD R +L
Sbjct: 795 KQSHLYVLNGVVEHMGSMGGGHYVAHIY-----------EDQNDNWYYVSDSSYRNQTLG 843
Query: 1028 EVLRCEAYILFYEKI 1042
+VL+ +AY+LFY+K+
Sbjct: 844 QVLQNQAYVLFYKKV 858
>gi|348563389|ref|XP_003467490.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like [Cavia
porcellus]
Length = 801
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 176/384 (45%), Gaps = 83/384 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + + + I + C +C + +RR G+ V IW+
Sbjct: 37 CQHVSHAVSVNHVKKAIAENLWSVCSEC---LKERRFYDGQP----------VFPSDIWL 83
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + WC+ C+ EK
Sbjct: 84 CLKCGFQGCGR----NSENQHSLKHFKSSRPESHCIIINLST-WIIWCYECD-----EKL 133
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L++VV L++ ++ + + F E K ES+ + N
Sbjct: 134 STHC-NKKVLAQVVDLLQKHVSK-----AQTSTFSRIIKLCEEKRESSEIKKGGKSSNV- 186
Query: 227 YVVRGLANLGNTCFFNSVMQNLLA-------MSQLQDYF---------------LNAELT 264
V+G+ NLGNTCFFN+V+QNL M+++Q+ L+ EL+
Sbjct: 187 PSVKGITNLGNTCFFNAVIQNLAQTYILIELMNEIQEDGTKLKISPSTDSQLDPLSVELS 246
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL LF + ET R ++P+ F +C KAP+FK +QQ DS ELL LLD
Sbjct: 247 SPGPLTSALL-LFLHSMTETE-RGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDA 304
Query: 324 LCSEEL---------AF------------RKRNSPSEGNGISSNQGPVFVDYVFGGQIAS 362
+ +EE AF RK+ G+ N F+D +F G++ S
Sbjct: 305 VRTEEKKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMN----FIDRIFIGELTS 360
Query: 363 TVRCVECGHSSTVYEPFLDLSLPV 386
TV C EC + STV +PF+D+SLP+
Sbjct: 361 TVMCEECANISTVKDPFIDISLPI 384
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---VKRDATKRVLINK 922
CSV ++A ++ +++L+ NC E + K V A K++LI+
Sbjct: 606 CSVQSCLHQ-FTAVELLMGNNRLLCENCTGRERRQRPQAGSAEKKEGVYTTARKQLLISA 664
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD---HDNYDYRLVGVV 979
P IL +HLKRF Q A L K+N HV+F +++L P+ C + D Y L G+V
Sbjct: 665 VPAILILHLKRFHQ-AGMSLRKVNRHVDFPLMLDLAPFCSATCKNVNMGDKVLYDLYGIV 723
Query: 980 EHLGTMRGGHYVAYVRGG-PKNKVKAK---KESV----------GGVWYHASDVYVREVS 1025
EH G+MRGGHY AYV+ P K+ K+S+ GG W H SD YV+ V
Sbjct: 724 EHSGSMRGGHYTAYVKVRLPSRKLLEHITGKKSITGLKELDSESGGQWVHVSDTYVQVVP 783
Query: 1026 LEEVLRCEAYILFYEKI 1042
L +AY+LFYE+I
Sbjct: 784 ESRALCAQAYLLFYERI 800
>gi|345778574|ref|XP_539054.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 1
[Canis lupus familiaris]
Length = 778
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 183/417 (43%), Gaps = 83/417 (19%)
Query: 17 KQAAARAPKSVLQQSKPV----ESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPI 72
K+ + P+ + +P E + D +PV C H+ I + + I +
Sbjct: 4 KEPSKALPEKAKRNKRPAIPRDEDSSDDIPVGFT---CQHISHAISVNHVKKAIAENVWS 60
Query: 73 RCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVV 132
C +C + +RR G+ V +W+CL CG CG + H +
Sbjct: 61 VCSEC---LKERRFCDGQP----------VLPSDVWLCLKCGFQGCGR----NSENHHSL 103
Query: 133 RHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTE 189
RH + R H + I + WC+ C+ EK + NK L++ V ++ ++
Sbjct: 104 RHYKSRRTESHCITISLST-WVIWCYECD-----EKLSTHC-NKKVLAQTVDFLQKHVSK 156
Query: 190 ISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLL 249
+ + F E K E+ G G++ V+G++NLGNTCFFN+VMQNL
Sbjct: 157 -----TQTSAFSRILKLCEEKCETGEKKGRK--GSSVTAVKGISNLGNTCFFNAVMQNLA 209
Query: 250 AMSQLQDYF----------------------LNAELTF-GPLTIALKKLFAETKPETGLR 286
L + L EL+ GPLT AL LF + ET +
Sbjct: 210 QSYILMELMNENKENGTKLKIFPPSDSQLDPLIVELSSPGPLTSALF-LFLHSMKETE-K 267
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELA------FRKRNSPSEG 340
+++P+ F +C KAP+FK +QQ DS ELL LLD + +EE + N+P+
Sbjct: 268 GLLSPKVLFNQLCQKAPRFKSFQQQDSQELLHYLLDAVRTEETKRIQASILKAFNNPTTK 327
Query: 341 NGISSNQGPV-----------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ V F+D +F G++ STV C EC + S+V +PF+D+SLP+
Sbjct: 328 TADEDTRKKVKAYGREGVKMNFIDRIFIGELTSTVMCEECANISSVNDPFIDISLPI 384
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 104/199 (52%), Gaps = 25/199 (12%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVKVKRDATKRVLIN 921
CSV +++ ++ +++L+ NC +++ + + S K + +A K++LI+
Sbjct: 582 CSVQSCLYQ-FTSMELLMGNNKLLCENCTAKKQRHRKATSCAEKKAESIYTNARKQLLIS 640
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD---HDNYDYRLVGV 978
P IL +HLKRF Q A L K+N HV+F I++L P+ C + D Y L GV
Sbjct: 641 AVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLILDLAPFCSATCKNVSVGDKVLYGLYGV 699
Query: 979 VEHLGTMRGGHYVAYVR------------GGPKNKVKAKKESVG---GVWYHASDVYVRE 1023
VEH G+MRGGHY AYV+ G KN V KE G W H SD YV+
Sbjct: 700 VEHSGSMRGGHYTAYVKVRTPSRKLLEHITGEKN-VPGLKEPDGESADQWVHVSDTYVQV 758
Query: 1024 VSLEEVLRCEAYILFYEKI 1042
V L +AY+LFYE+I
Sbjct: 759 VPESRALSAQAYLLFYERI 777
>gi|115477425|ref|NP_001062308.1| Os08g0527900 [Oryza sativa Japonica Group]
gi|42407645|dbj|BAD08759.1| ubiquitin-specific protease-like [Oryza sativa Japonica Group]
gi|42407955|dbj|BAD09093.1| ubiquitin-specific protease-like [Oryza sativa Japonica Group]
gi|113624277|dbj|BAF24222.1| Os08g0527900 [Oryza sativa Japonica Group]
gi|125604096|gb|EAZ43421.1| hypothetical protein OsJ_28026 [Oryza sativa Japonica Group]
Length = 750
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 83/125 (66%), Gaps = 10/125 (8%)
Query: 919 LINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGV 978
LI K PP+LTIHL R+ +D L+K+ GHV+F EI+++ +MDP D DN YRLVG
Sbjct: 633 LIRKLPPVLTIHLMRYLED----LTKVIGHVSFKEILDVGQFMDPSSEDRDNSRYRLVGF 688
Query: 979 VEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYIL 1037
VEHLG +M GHYVAYVR P + W+ ASD + EVSLEEVL+ EAY+L
Sbjct: 689 VEHLGPSMYAGHYVAYVRPSPPQQTNGSSS-----WFRASDTDITEVSLEEVLKREAYLL 743
Query: 1038 FYEKI 1042
FYE+I
Sbjct: 744 FYERI 748
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 38/390 (9%)
Query: 103 DSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIP 162
+ + I CL C C +H HA +H + + ++ PH+ +CF C
Sbjct: 144 EGREISACLDCESRFC---------TTHGKWHASVNKHWVALVYKKPHVAYCFACEECYF 194
Query: 163 VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLD 222
+ +TE G D + ++ + VD NV + S S +
Sbjct: 195 I-RTEHFGVVMDNEDDYFISLREEDEKGMRVD---------NVAGDHASGSVI------- 237
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPE 282
G+AC ++G+ NLGNTC+ NS++Q LL + +L+ L + G L +L+ LF +
Sbjct: 238 GHAC-PIKGIPNLGNTCYLNSLLQCLLVLGRLRAGILGLDAPLGLLGSSLRSLFDDADSV 296
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+++P C+ P+FKG HDS E L L GL EE A + N + G
Sbjct: 297 NNAGGLLDPEKLLACVRMLNPEFKGNGMHDSQEALCILRTGLDKEERAMKLSNMQA---G 353
Query: 343 ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRA 402
S P +D +FGGQ++ T C C S ++ F DLS+P+P +++P+K + +
Sbjct: 354 APSAVAPTVIDSIFGGQLSVTSSCKHCSVRSLSHDVFHDLSVPLP-QESPAKSDELSPWT 412
Query: 403 KKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQ 462
K + P K RI D H + + + + L + + PL + S
Sbjct: 413 KGRRSPRKI--RINLLSAIDKHKSDNEKTQSPASELEDVFLVKRSKPLKVDSTKVEQISH 470
Query: 463 LLDSVG-----SPTVATQCGSALQNVPADP 487
+D+ G V + L +P DP
Sbjct: 471 SMDAGGPLQTRKDKVQGKVVDVLPRIPEDP 500
>gi|194035115|ref|XP_001925615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Sus scrofa]
Length = 817
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 178/386 (46%), Gaps = 87/386 (22%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I+ + + I + C +C + +RR G+ V IW+
Sbjct: 38 CQHVSHAINVNHVKRAITENLWSVCSEC---LKERRFSDGQP----------VLLSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H V+H R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSVKHFNSWRAELHCIIISL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISS------VDVEDAWFGSGNVNSEIKSESTVVSGSD 220
+ NK L+++V ++ ++ + + + + + +G N KS S+V S
Sbjct: 135 STHC-NKKVLAQIVDFLQKHVSKTQTNAFSRIIKLCEEKYETGEKNKGRKS-SSVTS--- 189
Query: 221 LDGNACYVVRGLANLGNTCFFNSVMQNLLA-------MSQLQDY--------FLNAEL-- 263
V+G+ NLGNTCFFN+VMQNL M++++++ L+++L
Sbjct: 190 --------VKGITNLGNTCFFNAVMQNLAQSYILTELMNEIKEHGVKLRIVPSLDSQLDP 241
Query: 264 ------TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
+ GPLT AL LF + ET + ++P+ F +C KAP FK QQ DS ELL
Sbjct: 242 LVVELSSPGPLTSALF-LFLHSMKETE-KGPLSPKILFNQLCQKAPGFKSLQQQDSQELL 299
Query: 318 RCLLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQI 360
LLD + +EE + N+P+ + V F+D +F G++
Sbjct: 300 HYLLDAVRTEETKRIQAGILKAFNNPTTKTADDETRKKVKAYGREGVKMNFIDRIFIGEL 359
Query: 361 ASTVRCVECGHSSTVYEPFLDLSLPV 386
STV C EC + STV +PF+D+SLP+
Sbjct: 360 TSTVMCEECANISTVKDPFIDISLPI 385
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 107/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ IT E CS+ +++ ++ +++L+ +C ++ K ++ S K
Sbjct: 611 SQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCEHCTEKKQKYQKETSSAEKKAEG 667
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 668 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCSATCKNVC 726
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKN--KVKAKKESVGGV 1012
D Y L GVVEH G+MRGGHY AYV+ G KN +K G
Sbjct: 727 VGDKVLYGLYGVVEHSGSMRGGHYTAYVKVRTPSRKLLEHITGKKNIPGLKEPDSESAGQ 786
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 787 WVHVSDTYVQVVPESRALSAQAYLLFYERI 816
>gi|126310357|ref|XP_001367818.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Monodelphis
domestica]
Length = 824
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 153/355 (43%), Gaps = 86/355 (24%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPV 163
IW+CL CG C + H ++H + + H ++I + + WC+ C+ +
Sbjct: 81 IWLCLKCGFQGCS----QNSEDRHSLKHFQTSCTEPHCIIINL-STWIIWCYECDEELST 135
Query: 164 EKTEENGENKDALSEVVKLIKGR--STEISSV-----------DVEDAWFGSGNVNSEIK 210
+ NK AL+++V ++ TE SS + + W G +NS
Sbjct: 136 HR------NKKALAQIVDFLQKHVSKTEASSFSKVIRLCEEKCEAGELWKGKCQINSLPA 189
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDY------------- 257
S V+G+ NLGNTCFFN+VMQNL L +
Sbjct: 190 S-----------------VKGINNLGNTCFFNAVMQNLAQTHMLNELMYEVKEKGTKLKI 232
Query: 258 FLNAELTFGPLTIALKK---------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGY 308
F ++ PL + L LF + E G + ++P+ F +C KAP+FKG+
Sbjct: 233 FHTSDPQLDPLVVNLSSPGTLTSAMFLFLHSMKEPG-KGPLSPKVLFNQLCQKAPRFKGF 291
Query: 309 QQHDSHELLRCLLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------F 351
QQ DS ELL LLD + EE + N+P+ + V F
Sbjct: 292 QQQDSQELLHYLLDAMRIEETKRIQSGILKAFNNPTAKTADEETRKKVKAYGREGVKMNF 351
Query: 352 VDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
+D +F G++ STV C EC + S + EPF+DLSLP+ ++ K P R K K
Sbjct: 352 IDRIFVGELTSTVMCEECENISAMKEPFIDLSLPIIEERV--SKPVPVGRMSKCK 404
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 107/199 (53%), Gaps = 25/199 (12%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNC-ESEESKVEEINSKIVK---VKRDATKRVLIN 921
CS+ S E + +++L+ NC E ++ ++INS K + +A K++LI+
Sbjct: 628 CSIQSCLYQFTSVE-LLMGNNKLLCENCTEKKQMYQKKINSTEKKSEGMYTNARKQLLIS 686
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC---TDHDNYDYRLVGV 978
P IL +HLKRF Q A L K+N HV+F +++L P+ C T + Y L G+
Sbjct: 687 AVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLVLDLAPFCSVTCKNVTRGEKVLYGLYGI 745
Query: 979 VEHLGTMRGGHYVAYVR------------GGPKNKVKAKKESVG---GVWYHASDVYVRE 1023
VEH G+MRGGHY AYV+ G KN V KE+VG G W H SD +V+
Sbjct: 746 VEHSGSMRGGHYTAYVKVRTTSKKSLDHVVGNKN-VHGLKETVGAPPGQWVHVSDTHVQM 804
Query: 1024 VSLEEVLRCEAYILFYEKI 1042
V L +AY+LFYEKI
Sbjct: 805 VPESRALSAQAYLLFYEKI 823
>gi|440900231|gb|ELR51416.1| Ubiquitin carboxyl-terminal hydrolase 45 [Bos grunniens mutus]
Length = 817
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 171/380 (45%), Gaps = 75/380 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + + I + C +C V +RR G+ V IW+
Sbjct: 38 CQHISHAVSVHHVKKAIAENLWSVCLEC---VKERRFCDGQP----------VLPPDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSEGQHSLKHFKSWRAELHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ ++ + + F E K E T G +
Sbjct: 135 STHC-NKKVLAQIVDFLQKHVSK-----TQTSAFSRIIKLCEEKCE-TGEKNKGRKGGSV 187
Query: 227 YVVRGLANLGNTCFFNSVMQNLLA-------MSQLQDYF---------------LNAELT 264
V+G+ NLGNTCFFN+VMQNL M++++++ L EL+
Sbjct: 188 TSVKGITNLGNTCFFNAVMQNLAQSYILTELMNEIKEHGTKLKIVPSSDSQLDPLVVELS 247
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL LF + ET R ++P+ F +C KAP FK +QQ DS ELL LLD
Sbjct: 248 SPGPLTSALF-LFLHSMKETE-RGPLSPKVLFNQLCQKAPAFKSFQQQDSQELLHYLLDA 305
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ +EE + N+P+ + V F+D +F G++ STV C
Sbjct: 306 VRTEETKRIQAGILKAFNNPTTKTADDETRKKVKAYGREGVKMNFIDRIFIGELTSTVMC 365
Query: 367 VECGHSSTVYEPFLDLSLPV 386
EC + STV +PF+D+SLP+
Sbjct: 366 EECSNISTVKDPFIDISLPI 385
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 110/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ IT E CSV +++ ++ +++L+ NC ++ K ++ + K
Sbjct: 611 SQSYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTEKKQKYQKETTSAEKKAEG 667
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHD 969
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 668 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNVS 726
Query: 970 ---NYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVK---AKKESVGGV---------- 1012
Y L GVVEH G+M+GGHY AYV+ P K+ K++V G+
Sbjct: 727 VGGKVLYGLYGVVEHSGSMKGGHYTAYVKVRTPSRKLLEYITGKKNVPGLKEPDSESASQ 786
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 787 WVHVSDTYVQVVPESRALSAQAYLLFYERI 816
>gi|417404474|gb|JAA48989.1| Putative ubiquitin carboxyl-terminal hydrolase 45 [Desmodus
rotundus]
Length = 767
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 171/379 (45%), Gaps = 73/379 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ ++ + + I + C +C + +RR G+ S IW+
Sbjct: 37 CQHVSHAVNVNHVKKAIAENLWSVCSEC---LKERRFYDGQPG----------LSSDIWL 83
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + R H ++I N + WC+ C+ EK
Sbjct: 84 CLKCGFQGCG----KNSESQHSLKHFKSWRAELHCIIISL-NTWIIWCYECD-----EKL 133
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L ++V ++ ++ + + F E K E T G+
Sbjct: 134 STHC-NKKVLVQIVDFLQKHVSK-----TQTSTFSKIIKLCEEKCE-TGEKKKGRKGSCV 186
Query: 227 YVVRGLANLGNTCFFNSVMQNLL-------AMSQLQD------YFLNAELTFGPLTIALK 273
V+G+ NLGNTCFFN+VMQNL MS++++ F +++ PLT+ L
Sbjct: 187 TAVKGITNLGNTCFFNAVMQNLAQSYILTELMSEIKENGTKLKIFPSSDSQLDPLTVELS 246
Query: 274 K---------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL 324
LF + +T + ++P++ F +C KAP+FK +QQ DS ELL LLD +
Sbjct: 247 SPGPLTSALILFLHSMKDTE-KGPLSPKALFSQLCQKAPRFKSFQQQDSQELLHYLLDAV 305
Query: 325 CSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRCV 367
+EE + N+P+ + V F+D +F G++ STV C
Sbjct: 306 RTEETKRIQAGILKAFNNPTTKTADDETRRKVKAYGREGVKMNFIDRIFIGELTSTVMCE 365
Query: 368 ECGHSSTVYEPFLDLSLPV 386
EC + S V +PF+D+SLP+
Sbjct: 366 ECANVSMVKDPFIDISLPI 384
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ +T E CSV +++ ++ +++L+ NC ++ K + I S K
Sbjct: 561 SQSYVTTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTEKKRKCQRITSSAEKKAEG 617
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
+ +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 618 IYTNARKQLLISAVPVILILHLKRFHQ-AGLSLHKVNRHVDFPLMLDLAPFCSATCKNVS 676
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR-----GGPKNKVKAKKESVG---------GV 1012
+ Y L GVVEH G+MRGGHY AYV+ G + KK G G
Sbjct: 677 VGEEVLYGLYGVVEHSGSMRGGHYTAYVKVRTPSGRLWEHITGKKSVPGLKEPDSESPGQ 736
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 737 WVHVSDTYVQVVPESRALSAQAYLLFYERI 766
>gi|417404315|gb|JAA48917.1| Putative ubiquitin carboxyl-terminal hydrolase 45 [Desmodus
rotundus]
Length = 743
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 171/379 (45%), Gaps = 73/379 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ ++ + + I + C +C + +RR G+ S IW+
Sbjct: 13 CQHVSHAVNVNHVKKAIAENLWSVCSEC---LKERRFYDGQPG----------LSSDIWL 59
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + R H ++I N + WC+ C+ EK
Sbjct: 60 CLKCGFQGCG----KNSESQHSLKHFKSWRAELHCIIISL-NTWIIWCYECD-----EKL 109
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L ++V ++ ++ + + F E K E T G+
Sbjct: 110 STHC-NKKVLVQIVDFLQKHVSK-----TQTSTFSKIIKLCEEKCE-TGEKKKGRKGSCV 162
Query: 227 YVVRGLANLGNTCFFNSVMQNLL-------AMSQLQD------YFLNAELTFGPLTIALK 273
V+G+ NLGNTCFFN+VMQNL MS++++ F +++ PLT+ L
Sbjct: 163 TAVKGITNLGNTCFFNAVMQNLAQSYILTELMSEIKENGTKLKIFPSSDSQLDPLTVELS 222
Query: 274 K---------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL 324
LF + +T + ++P++ F +C KAP+FK +QQ DS ELL LLD +
Sbjct: 223 SPGPLTSALILFLHSMKDTE-KGPLSPKALFSQLCQKAPRFKSFQQQDSQELLHYLLDAV 281
Query: 325 CSEEL------AFRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRCV 367
+EE + N+P+ + V F+D +F G++ STV C
Sbjct: 282 RTEETKRIQAGILKAFNNPTTKTADDETRRKVKAYGREGVKMNFIDRIFIGELTSTVMCE 341
Query: 368 ECGHSSTVYEPFLDLSLPV 386
EC + S V +PF+D+SLP+
Sbjct: 342 ECANVSMVKDPFIDISLPI 360
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ +T E CSV +++ ++ +++L+ NC ++ K + I S K
Sbjct: 537 SQSYVTTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTEKKRKCQRITSSAEKKAEG 593
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
+ +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 594 IYTNARKQLLISAVPVILILHLKRFHQ-AGLSLHKVNRHVDFPLMLDLAPFCSATCKNVS 652
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR-----GGPKNKVKAKKESVG---------GV 1012
+ Y L GVVEH G+MRGGHY AYV+ G + KK G G
Sbjct: 653 VGEEVLYGLYGVVEHSGSMRGGHYTAYVKVRTPSGRLWEHITGKKSVPGLKEPDSESPGQ 712
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 713 WVHVSDTYVQVVPESRALSAQAYLLFYERI 742
>gi|395534662|ref|XP_003769359.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Sarcophilus
harrisii]
Length = 823
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 153/355 (43%), Gaps = 86/355 (24%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV 163
IW+CL CG C + H ++H + +R H ++I + + WC+ C+ +
Sbjct: 81 IWLCLKCGFQGCS----QNSEDQHSLKHFQTSRTEPHCIIINL-STWIIWCYECDEELST 135
Query: 164 EKTEENGENKDALSEVVKLIKGR--STEISSV-----------DVEDAWFGSGNVNSEIK 210
+ NK L+++V ++ TE SS + + W G ++S
Sbjct: 136 HR------NKKVLAQIVDFLQKHVSKTEASSFSKVIRLCEEKCEAGEIWKGKCQISSLPA 189
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDY------------- 257
S V+G+ NLGNTCFFN+VMQNL L +
Sbjct: 190 S-----------------VKGINNLGNTCFFNAVMQNLAQTHMLNELMYEVKEKGTKLKI 232
Query: 258 FLNAELTFGPLTIALKK---------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGY 308
F ++ PL + L LF + E G + ++P+ F +C KAP+FKG+
Sbjct: 233 FHTSDPQLDPLVVNLSSPGTLTSAMFLFLHSMKEPG-KGPLSPKVLFNQLCQKAPRFKGF 291
Query: 309 QQHDSHELLRCLLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------F 351
QQ DS ELL LLD + EE + N+P+ + + F
Sbjct: 292 QQQDSQELLHYLLDAMRIEETKRIQTGILKAFNNPTTKTADEETRKKIKAYGREGVKMNF 351
Query: 352 VDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
+D +F G++ STV C EC + S + EPF+DLSLP+ ++ K P R K K
Sbjct: 352 IDRIFVGELTSTVMCEECENISAMKEPFIDLSLPIIEERV--SKPVPLGRTNKCK 404
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 106/198 (53%), Gaps = 24/198 (12%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNC-ESEESKVEEINSKIVK---VKRDATKRVLIN 921
CS+ S E + +++L+ NC E ++ ++INS K V +A K++LI+
Sbjct: 628 CSIQSCLYQFTSVE-LLMGNNKLLCENCTEKKQMYQKKINSTEKKPEGVYTNARKQLLIS 686
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC---TDHDNYDYRLVGV 978
P IL +HLKRF Q A L K+N HV+F +++L P+ C T + Y L G+
Sbjct: 687 AVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLVLDLAPFCSVTCKNVTSGERVLYGLYGI 745
Query: 979 VEHLGTMRGGHYVAYVR-----------GGPKNKVKAKKESVG---GVWYHASDVYVREV 1024
VEH G+MRGGHY A+V+ G KN + KE+ G G W H SD +V+ V
Sbjct: 746 VEHSGSMRGGHYTAFVKVRTSKKSLDHVVGNKN-IHGLKETTGASTGQWVHVSDTHVQMV 804
Query: 1025 SLEEVLRCEAYILFYEKI 1042
L +AY+LFYE+I
Sbjct: 805 PESRALNAQAYLLFYERI 822
>gi|329664042|ref|NP_001193110.1| ubiquitin carboxyl-terminal hydrolase 45 [Bos taurus]
gi|296484110|tpg|DAA26225.1| TPA: ubiquitin specific protease 16-like [Bos taurus]
Length = 817
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 154/323 (47%), Gaps = 62/323 (19%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV 163
IW+CL CG CG + H ++H + R H ++I + + WC+ C+
Sbjct: 82 IWLCLKCGFQGCG----KNSEGQHSLKHFKSWRAELHCIIINL-STWIIWCYECD----- 131
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
EK + NK L+++V ++ ++ + + F E K E T G
Sbjct: 132 EKLSTHC-NKKVLAQIVDFLQKHVSK-----TQTSAFSRIIKLCEEKCE-TGEKNKGRKG 184
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLA-------MSQLQDYF---------------LNA 261
+ V+G+ NLGNTCFFN+VMQNL M++++++ L
Sbjct: 185 GSVTSVKGITNLGNTCFFNAVMQNLAQSYILTELMNEIKEHGTKLKIVPSSDSQLDPLVV 244
Query: 262 ELTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
EL+ GPLT AL LF + ET R ++P+ F +C KAP FK +QQ DS ELL L
Sbjct: 245 ELSSPGPLTSALF-LFLHSMKETE-RGPLSPKVLFNQLCQKAPAFKSFQQQDSQELLHYL 302
Query: 321 LDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAST 363
LD + +EE + N+P+ + V F+D +F G++ ST
Sbjct: 303 LDAVRTEETKRIQAGILKAFNNPTTKTADDETRKKVKAYGREGVKMNFIDRIFIGELTST 362
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
V C EC + STV +PF+D+SLP+
Sbjct: 363 VMCEECSNISTVKDPFIDISLPI 385
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 109/210 (51%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ IT E CSV +++ ++ +++L+ NC ++ K ++ + K
Sbjct: 611 SQSYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTEKKQKYQKETTSAEKKAEG 667
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHD 969
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 668 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCSATCKNVS 726
Query: 970 ---NYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVK---AKKESVGGV---------- 1012
Y L GVVEH G+M+GGHY AYV+ P K+ K++V G+
Sbjct: 727 VGGKVLYGLYGVVEHSGSMKGGHYTAYVKVRTPSRKLLEYITGKKNVPGLKEPDSESASQ 786
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 787 WVHVSDTYVQVVPESRALSAQAYLLFYERI 816
>gi|157817205|ref|NP_001101388.1| ubiquitin carboxyl-terminal hydrolase 45 [Rattus norvegicus]
gi|149045519|gb|EDL98519.1| ubiquitin specific petidase 45 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 594
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 150/323 (46%), Gaps = 62/323 (19%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPV 163
+W+CL CG CG + H +RH + + H +VI + WC+ CN
Sbjct: 82 VWLCLKCGFQGCGK----NSESQHSLRHFKSSGAESHCVVISLST-WVIWCYECN----- 131
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
EK + NK L+++V ++ + + DA+ + E + + G G
Sbjct: 132 EKLSTHC-NKKVLAQIVDFLQKHVFKTQT----DAFSRIIKLCEEKREAGEIKKGKK--G 184
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNA 261
A V+G+ NLGNTCFFN+V+QNL L + L
Sbjct: 185 CAVPSVKGITNLGNTCFFNAVIQNLAQTYILFELMNEIKEDGTKFKISLSSAPQLEPLVV 244
Query: 262 ELTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
EL+ GPLT AL LF + E + ++P+ F +C KAP+FKG+QQ DS ELL L
Sbjct: 245 ELSSPGPLTSALF-LFLHSMKEAE-KGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHHL 302
Query: 321 LDGLCSEEL------AFRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAST 363
LD + +EE + N+P+ + V F+D +F G++ ST
Sbjct: 303 LDAVRTEETKRIQASILKAFNNPTTKTADEETRKKVKAYGKEGVKMNFIDRIFIGELTST 362
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
V C EC + ST+ +PF+D+SLP+
Sbjct: 363 VMCEECANISTMKDPFIDISLPI 385
Score = 103 bits (256), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 18/150 (12%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 445 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCAATCKNIS 503
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVRGG-PKNKV-------------KAKKESVGGV 1012
+ Y L G+VEH G+MRGGHY AYV+ P K+ K +GG
Sbjct: 504 VGEKVLYGLYGIVEHSGSMRGGHYTAYVKVRVPSRKLSECITGRKTAPGLKEADSELGGH 563
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 564 WVHVSDTYVQVVPESRALSAQAYLLFYERI 593
>gi|449271557|gb|EMC81863.1| Ubiquitin carboxyl-terminal hydrolase 45 [Columba livia]
Length = 747
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 152/346 (43%), Gaps = 71/346 (20%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRH---ARQTRHPLVIQWENPHLRWCFPCNTLIPV 163
IW+CL CG C + H ++H AR H +VI + WC+ C+ +
Sbjct: 12 IWLCLKCGSQGCS----KNSEGQHSLKHFQTARTEPHCIVINLST-WIIWCYECDEELST 66
Query: 164 EKTEENGENKDALSEVVKLIK--GRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDL 221
NK L+++V ++ G E SS + + E S ++ G
Sbjct: 67 HC------NKKVLAQIVDFLQKHGSRAEPSSSKII-------RLREENSEASEILKGKSS 113
Query: 222 DGNACYVVRGLANLGNTCFFNSVMQNLLAM------------------------SQLQDY 257
A V+G+ NLGNTCFFN+VMQNL SQL
Sbjct: 114 ANGATVPVKGINNLGNTCFFNAVMQNLAQTHILNELMCEMKEKGTKLKICHTSDSQLDPL 173
Query: 258 FLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
+N + GPLT A+ LF + E G + ++P+ F +C KAP+FKG+QQ DS ELL
Sbjct: 174 VVNLS-SPGPLTSAMF-LFLHSMREAG-KGPLSPKVLFSQLCQKAPRFKGFQQQDSQELL 230
Query: 318 RCLLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQI 360
LLD + EE + N+P+ + V F+D +F G++
Sbjct: 231 HYLLDAMRIEETKRIQTGILKAFNNPTTKTADEETRRKVKAYGREGVKMNFIDRIFVGEL 290
Query: 361 ASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
STV C EC + V EPF+DLSLP+ ++ K P R K K
Sbjct: 291 TSTVMCEEC--ENVVKEPFIDLSLPIIEERVA--KPVPLGRTGKGK 332
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEE----INSKI 907
+ SQ IT E CSV S E + +++L+ +C + K ++ K+
Sbjct: 538 TLSQSYITSSKE--CSVQSCLYQFTSVE-LLMGNNKLLCESCTERKQKYQKKTISTEKKV 594
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC-- 965
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F I++L P+ C
Sbjct: 595 EGVYTNARKQLLISSVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLILDLAPFCAASCKN 653
Query: 966 -TDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK-----------VKAKKESV---G 1010
TD Y L G+VEH G+MRGGHY AYV+ +K V KE++ G
Sbjct: 654 VTDGARVLYSLYGIVEHSGSMRGGHYAAYVKVRTPSKKLLEHISTTKNVLGLKEAMGAPG 713
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G W + SD +V+ V VL +AY+LFYE++
Sbjct: 714 GQWVYVSDAHVQMVPESRVLNAQAYLLFYERL 745
>gi|426234639|ref|XP_004011300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 1 [Ovis
aries]
Length = 815
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 149/324 (45%), Gaps = 64/324 (19%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV 163
IW+CL CG CG + H ++H + R H ++I + + WC+ C+
Sbjct: 82 IWLCLKCGFQGCG----KNSEGQHSLKHFKSWRAELHCIIINL-STWIIWCYECD----- 131
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
EK + NK L++ V ++ ++ + + F E K E T G
Sbjct: 132 EKLSTHC-NKKVLAQTVDFLQKHVSK-----TQTSAFSRIIKLCEEKCE-TGEKNKGRKG 184
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTF------------ 265
+ V+G+ NLGNTCFFN+VMQNL A S + +N EL
Sbjct: 185 GSVTSVKGITNLGNTCFFNAVMQNL-AQSYILTELMNEIKEHGTELKIVPSSDSQLDPLV 243
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT AL LF + ET R ++P+ F +C KAP FK +QQ DS ELL
Sbjct: 244 VELSSPGPLTSALF-LFLHSMKETE-RGPLSPKVLFNQLCQKAPAFKSFQQQDSQELLHY 301
Query: 320 LLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAS 362
LLD + +EE + N+P+ + V F+D +F G++ S
Sbjct: 302 LLDAVRTEETKRIQAGILKAFNNPTTKTADDETRKKVKAYGREGVKMNFIDRIFIGELTS 361
Query: 363 TVRCVECGHSSTVYEPFLDLSLPV 386
TV C EC + STV +PF+D+SLP+
Sbjct: 362 TVMCEECSNISTVKDPFIDISLPI 385
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 110/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ IT E CSV +++ ++ +++L+ NC ++ K ++ + K
Sbjct: 609 SQSYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTEKKQKYQKETTSAEKKAEG 665
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHD 969
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 666 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNVS 724
Query: 970 ---NYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVKAK---KESVGGV---------- 1012
Y L GVVEH G+MRGGHY AYV+ P K+ K++V G+
Sbjct: 725 VGGKVLYGLYGVVEHSGSMRGGHYTAYVKVRTPSRKLLEHITGKKNVPGLKEADSESASQ 784
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 785 WVHVSDTYVQVVPESRALSAQAYLLFYERI 814
>gi|426234641|ref|XP_004011301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 isoform 2 [Ovis
aries]
Length = 814
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 149/324 (45%), Gaps = 64/324 (19%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV 163
IW+CL CG CG + H ++H + R H ++I + + WC+ C+
Sbjct: 81 IWLCLKCGFQGCG----KNSEGQHSLKHFKSWRAELHCIIINL-STWIIWCYECD----- 130
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
EK + NK L++ V ++ ++ + + F E K E T G
Sbjct: 131 EKLSTHC-NKKVLAQTVDFLQKHVSK-----TQTSAFSRIIKLCEEKCE-TGEKNKGRKG 183
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTF------------ 265
+ V+G+ NLGNTCFFN+VMQNL A S + +N EL
Sbjct: 184 GSVTSVKGITNLGNTCFFNAVMQNL-AQSYILTELMNEIKEHGTELKIVPSSDSQLDPLV 242
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT AL LF + ET R ++P+ F +C KAP FK +QQ DS ELL
Sbjct: 243 VELSSPGPLTSALF-LFLHSMKETE-RGPLSPKVLFNQLCQKAPAFKSFQQQDSQELLHY 300
Query: 320 LLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAS 362
LLD + +EE + N+P+ + V F+D +F G++ S
Sbjct: 301 LLDAVRTEETKRIQAGILKAFNNPTTKTADDETRKKVKAYGREGVKMNFIDRIFIGELTS 360
Query: 363 TVRCVECGHSSTVYEPFLDLSLPV 386
TV C EC + STV +PF+D+SLP+
Sbjct: 361 TVMCEECSNISTVKDPFIDISLPI 384
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 110/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ IT E CSV +++ ++ +++L+ NC ++ K ++ + K
Sbjct: 608 SQSYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTEKKQKYQKETTSAEKKAEG 664
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHD 969
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 665 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNVS 723
Query: 970 ---NYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVKAK---KESVGGV---------- 1012
Y L GVVEH G+MRGGHY AYV+ P K+ K++V G+
Sbjct: 724 VGGKVLYGLYGVVEHSGSMRGGHYTAYVKVRTPSRKLLEHITGKKNVPGLKEADSESASQ 783
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 784 WVHVSDTYVQVVPESRALSAQAYLLFYERI 813
>gi|351706583|gb|EHB09502.1| Ubiquitin carboxyl-terminal hydrolase 45 [Heterocephalus glaber]
Length = 808
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 170/379 (44%), Gaps = 76/379 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + + + I + C +C + +RR G+ V IW+
Sbjct: 37 CQHVSHAVSVNHVKKAITENLWSVCSEC---LKERRFYDGQS----------VLPSDIWL 83
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H +VI + WC+ C+ EK
Sbjct: 84 CLKCGFQGCGK----NSENHHSLKHFKSSRTESHCIVINLST-WIIWCYECD-----EKL 133
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ ++ + + F E K E++ + G+
Sbjct: 134 STHC-NKKVLAQIVDFLQKHVSK-----TQTSTFSRIIKLCEEKRETSEIKRGRKSGSV- 186
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF---------------------LNAELTF 265
V+G+ NLGNTCFFN+V+QNL L + L EL+
Sbjct: 187 PSVKGITNLGNTCFFNAVIQNLAQTYILIELMNEIKEDGTKLNISPADSQLDPLAVELSS 246
Query: 266 -GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL 324
GPLT AL LF + +T R ++P+ F +C KAP+FKG+QQ DS ELL LLD +
Sbjct: 247 PGPLTSALL-LFLHSMKDTE-RGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHYLLDAV 304
Query: 325 CSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRCV 367
+EE + N+P+ + V F+D +F G++ STV C
Sbjct: 305 RTEETKRIQGSILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMCE 364
Query: 368 ECGHSSTVYEPFLDLSLPV 386
EC +S V +PF+D+SLP+
Sbjct: 365 EC--ASVVKDPFIDISLPI 381
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEE----INSKIVK 909
SQ +T E CSV +++ ++ ++L+ NC ++ K ++ K
Sbjct: 602 SQSYVTTSKE--CSVQSCLYQ-FTSMELLMGTNKLLCENCTEKKQKYQKETGSAEKKAEG 658
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 659 VYTNARKQLLISAVPAILILHLKRFHQ-AGVTLRKVNRHVDFPLTLDLAPFCSATCKNVS 717
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVRGG-PKNK-------------VKAKKESVGGV 1012
D Y L G+VEH G+MRGGHY AYV+ P K +K GG
Sbjct: 718 VGDKVLYDLYGIVEHSGSMRGGHYTAYVKVRLPSRKLLEHITGKKSIPGLKEPDRESGGQ 777
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 778 WVHVSDSYVQVVPESRALSAQAYLLFYERI 807
>gi|354483145|ref|XP_003503755.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Cricetulus
griseus]
Length = 768
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 62/323 (19%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPV 163
+W+CL CG CG + H +RH + H VI + + WC+ CN +
Sbjct: 82 VWLCLKCGFQGCG----KNSESQHSLRHFQSLGTDSHFFVISLSSWTI-WCYECNEKLLT 136
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
+ NK L+++V ++ ++ + A+ ++ E + + G G
Sbjct: 137 QC------NKKVLAQIVDFLQKHVSKTQT----GAFSKVIKLSEEKRETGEIKKGRK--G 184
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNA 261
+ V+G+ NLGNTCFFN+V+QNL L + L
Sbjct: 185 SCVPSVKGITNLGNTCFFNAVIQNLAQTHVLFELMNEIKEDGTKLKISLSSAPQLDPLVV 244
Query: 262 ELTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
EL+ GPLT AL LF + E + ++P+ F +C KAP+FKG+QQ DS ELL L
Sbjct: 245 ELSSPGPLTSALF-LFLHSMKEAE-KGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHHL 302
Query: 321 LDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAST 363
LD + +EE + N+P+ + V F+D +F G++ ST
Sbjct: 303 LDAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTST 362
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
V C EC + ST+ +PF+D+SLP+
Sbjct: 363 VMCEECANISTMKDPFIDISLPI 385
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 107/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ +T E CSV +++ ++ +++L+ +C ++ K + S K
Sbjct: 562 SQSYVTTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCEDCTEKKQKCQRETSSAEKKAGG 618
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F I++L P+ C +
Sbjct: 619 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLILDLAPFCAAACKNIN 677
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNK-------------VKAKKESVGGV 1012
+ Y L G+VEH G+MRGGHY AYV+ P K +K +G
Sbjct: 678 VGEKVLYGLYGIVEHSGSMRGGHYTAYVKVRVPSRKLSEYITGRKTVPGLKEPDSDLGSH 737
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 738 WVHISDTYVQVVPESRALSAQAYLLFYERI 767
>gi|291396675|ref|XP_002714940.1| PREDICTED: ubiquitin specific peptidase 45 [Oryctolagus cuniculus]
Length = 814
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 151/325 (46%), Gaps = 66/325 (20%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPV 163
IW+CL CG CG + H ++H + + H +VI + WC+ C+
Sbjct: 82 IWLCLKCGFQGCGK----NSESQHSLKHFKSSGPEPHCIVISLST-WIIWCYECD----- 131
Query: 164 EKTEENGENKDALSEVVKLIKGR--STEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDL 221
EK + NK L+++V ++ T+ S+V SEIK +GS
Sbjct: 132 EKLSTHC-NKKVLAQIVDFLQKHVSKTQTSAVSRLMKLCEEKCETSEIKKGRKSSNGSS- 189
Query: 222 DGNACYVVRGLANLGNTCFFNSVMQNL---LAMSQLQDYFLNAELTF------------- 265
V+G+ NLGNTCFFN+V+QNL +++L + F
Sbjct: 190 -------VKGITNLGNTCFFNAVIQNLSQTYILTELMNEMKENGTKFKIFPSSDSQLDPL 242
Query: 266 -------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL
Sbjct: 243 VVELPSPGPLTSALF-LFLHSMRETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLH 300
Query: 319 CLLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIA 361
LLD + +EE + N+P+ + + V F+D +F G++
Sbjct: 301 YLLDVVRTEETKRIQASILKAFNNPTTKTADDATRKKVKAYGKEGVKMNFIDRIFIGELT 360
Query: 362 STVRCVECGHSSTVYEPFLDLSLPV 386
STV C EC + ST+ +PF+D+SLP+
Sbjct: 361 STVMCEECANISTMKDPFIDISLPI 385
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 114/211 (54%), Gaps = 27/211 (12%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNC-ESEESKVEEINS---KIVK 909
SQ IT E CSV +++ ++ +++L+ NC E ++ +EINS K
Sbjct: 608 SQSYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTEKKQRYPKEINSAEKKAEA 664
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ PPIL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 665 VYTNARKQLLISAVPPILILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNIS 723
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNK----VKAKK----------ESVGG 1011
D Y L G+VEH G+MRGGHY AYV+ P K + KK ESVG
Sbjct: 724 MGDKVLYSLYGIVEHSGSMRGGHYTAYVKVRTPSRKLSEYITGKKTVPDVKEPDSESVGQ 783
Query: 1012 VWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE++
Sbjct: 784 -WIHVSDTYVQVVPESRALNAQAYLLFYERL 813
>gi|115477423|ref|NP_001062307.1| Os08g0527800 [Oryza sativa Japonica Group]
gi|42407644|dbj|BAD08758.1| ubiquitin-specific protease-like [Oryza sativa Japonica Group]
gi|113624276|dbj|BAF24221.1| Os08g0527800 [Oryza sativa Japonica Group]
gi|215693297|dbj|BAG88679.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 390
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 169/383 (44%), Gaps = 87/383 (22%)
Query: 661 DLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPE 720
D+F+EPE + + T++ SSD D +S S++ L + E
Sbjct: 92 DVFSEPEVS------SEAKTDTFSVEVRKSRSSDISCDNAQGINSLASIDKYLELHFEAE 145
Query: 721 LLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQNDIQGSSLTDVDSLC 780
++ W CESCSK +A KP IN G+ SN + S
Sbjct: 146 MVE----WTCESCSK---------------VAQKPGINLGKYSNP----------MMSST 176
Query: 781 NGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQREKGKMKINDAV 840
N D + D + E + +S +++ G+ + ++ V
Sbjct: 177 NEDITVDGDQSELSEKITCRSEQSN--------------------------GRPECHEGV 210
Query: 841 EMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKV 900
+ ++ SC+ ++ QD+ +S S E+ Q A E +++
Sbjct: 211 Q-EAEPSCIPAEKQANLLSGQDQ--------NASILSEERGEQVKLHHGAHQVEENQNEQ 261
Query: 901 EEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY 960
++ N + K+ I+K PP+L IHL R K+ GHV F EI+++ +
Sbjct: 262 KDWN-------KGGIKKHFISKLPPVLVIHLMRSLLGPH----KVIGHVRFKEILDMGLF 310
Query: 961 MDPGCTDHDNYDYRLVGVVEHLGTMR-GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDV 1019
MDP D DN YRLVGVVEH G GH++AYVR P+ + S W+ ASD
Sbjct: 311 MDPSSEDKDNLSYRLVGVVEHRGLGNDAGHFLAYVRASPRQET-----SGSSSWFRASDD 365
Query: 1020 YVREVSLEEVLRCEAYILFYEKI 1042
+REVSLEEVL+CEAY+LFYE++
Sbjct: 366 SIREVSLEEVLKCEAYLLFYERM 388
>gi|149723064|ref|XP_001503931.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Equus
caballus]
Length = 818
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 173/384 (45%), Gaps = 83/384 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H++ + + + I + C +C + +RR G+ V +W+
Sbjct: 38 CQHVNLAVSVNHVKRAIAENLWSVCSEC---LKERRFYDGQP----------VLLTDVWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG ++ H ++H + R H ++I + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----QSSESQHSLKHFKSQRTELHCIIINLSTWTI-WCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGR--STEISSVD-VEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
+ NK L+++V ++ T+ S+ V ++ ++K+ G
Sbjct: 135 STHC-NKKVLAQIVDFLQKHISKTQTSAFSRVIKLCEEKCEIDEKMKAR---------KG 184
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----------------------- 260
++ V+G+ NLGNTCFFN+VMQNL A S + +N
Sbjct: 185 SSGPSVKGITNLGNTCFFNAVMQNL-AQSYILTELMNESKENGTKLKISPSSDSQLDPLV 243
Query: 261 AELTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
EL+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL
Sbjct: 244 VELSSPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKSFQQQDSQELLHY 301
Query: 320 LLDGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIAS 362
LLD + +EE + N+P+ + V F+D +F G++ S
Sbjct: 302 LLDAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGREGVKMNFIDQIFVGELTS 361
Query: 363 TVRCVECGHSSTVYEPFLDLSLPV 386
TV C EC + S V +PF+D+SLP+
Sbjct: 362 TVMCEECANISMVKDPFIDISLPI 385
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 111/213 (52%), Gaps = 26/213 (12%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCE-SEESKVEEINSKIVK- 909
+ SQ IT E CSV +++ ++ +++L+ NC +++ K ++ +S K
Sbjct: 609 TLSQSYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTLTKKQKYQKESSSAEKK 665
Query: 910 ---VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT 966
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C
Sbjct: 666 AEGVYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCK 724
Query: 967 D---HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKN--KVKAKKESV 1009
+ D Y L GVVEH G+MRGGHY AYV+ G +N +K
Sbjct: 725 NVNVGDKVLYGLYGVVEHSGSMRGGHYTAYVKVRTPSRRLLEHITGKRNVPGLKEPDSES 784
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G W H SD YV+ V L +AY+LFYE+I
Sbjct: 785 AGQWVHVSDTYVQVVPESRALSAQAYLLFYERI 817
>gi|296198842|ref|XP_002746903.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45 [Callithrix
jacchus]
Length = 815
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 165/380 (43%), Gaps = 76/380 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ V W+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFCDGQP----------VLPSDTWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + + H ++I + WC+ C+ EK
Sbjct: 85 CLKCGFQGCGK----NSESQHSLKHFKSSGTEPHCIIISLST-WIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ +
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIKKGG--KGRI 186
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAELT 264
VRGL NLGNTCFFN+VMQNL L D L EL+
Sbjct: 187 SSVRGLTNLGNTCFFNAVMQNLAQTYILTDLMNEIKENSTKLKIFPSSDSQLDPLVVELS 246
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LLD
Sbjct: 247 RPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDA 304
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ +EE + N+P+ + + F+D +F G++ STV C
Sbjct: 305 VRTEETKRIQASILKAFNNPTTKTADDETRKKIKAYGKEGVKMNFIDRIFIGELTSTVMC 364
Query: 367 VECGHSSTVYEPFLDLSLPV 386
EC + S V +PF+D+SLP+
Sbjct: 365 EECANISMVKDPFIDISLPI 384
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 111/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ IT E CSV +++ ++ +++L+ NC + K +E S K+
Sbjct: 609 SQSYITASKE--CSVQSCLYQ-FTSMELLIGNNKLLCENCTENKQKYQEETSLAEKKVEG 665
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 666 VYTNARKQLLISAIPVVLILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCSATCKNAS 724
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKVK---AKKESVGGV---------- 1012
D Y L G+VEH G+MRGGHY AYVR P K+ KK++V G+
Sbjct: 725 MGDKVLYGLYGIVEHSGSMRGGHYTAYVRVRTPSRKLTEHITKKKNVPGLKEADSESAGQ 784
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE++
Sbjct: 785 WVHVSDTYVQAVPESRALSAQAYLLFYERV 814
>gi|125562283|gb|EAZ07731.1| hypothetical protein OsI_29986 [Oryza sativa Indica Group]
Length = 794
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 168/383 (43%), Gaps = 87/383 (22%)
Query: 661 DLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPE 720
D+F+EPE + + T++ SSD D +S S++ L + E
Sbjct: 496 DVFSEPEVS------SEAKTDTFSVEVRKSRSSDISCDNAQGINSLASIDKYLELHFEAE 549
Query: 721 LLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQNDIQGSSLTDVDSLC 780
++ W CESCSK +A KP IN G+ SN + S
Sbjct: 550 MVE----WTCESCSK---------------VAQKPGINLGKYSNP----------MMSST 580
Query: 781 NGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQREKGKMKINDAV 840
N D + D + E + +S ++ G+ + ++ V
Sbjct: 581 NEDITVDGDQSELSEKITCRS--------------------------EQSNGRPECHEGV 614
Query: 841 EMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKV 900
+ ++ SC+ ++ QD+ +S S E+ Q A E +++
Sbjct: 615 Q-EAEPSCIPAEKQANLLSGQDQ--------NASILSEERGEQVKLHHGAHQVEENQNEQ 665
Query: 901 EEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY 960
++ N + K+ I+K PP+L IHL R K+ GHV F EI+++ +
Sbjct: 666 KDWN-------KGGIKKHFISKLPPVLVIHLMRSLLGPH----KVIGHVRFKEILDMGLF 714
Query: 961 MDPGCTDHDNYDYRLVGVVEHLGTMR-GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDV 1019
MDP D DN YRLVGVVEH G GH++AYVR P+ + S W+ ASD
Sbjct: 715 MDPSSEDKDNLSYRLVGVVEHCGLGNDAGHFLAYVRASPRQET-----SGSSSWFRASDD 769
Query: 1020 YVREVSLEEVLRCEAYILFYEKI 1042
+REVSLEEVL+CEAY+LFYE++
Sbjct: 770 SIREVSLEEVLKCEAYLLFYERM 792
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 242/560 (43%), Gaps = 62/560 (11%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHA-RQTRHPLVIQWENPHLRWCFPCNTLIPVEK 165
I VCL C C +H HA + H + + +E + +CF C
Sbjct: 93 IMVCLECELRLCA---------NHACIHAMHEEEHSIALYYERLNRVYCFKC-------- 135
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSG--NVNSEIKSESTVVSGSDLDG 223
++A VK G T+ + V E++ S + E + + VSG DG
Sbjct: 136 -------EEAYDIGVKDDDGGMTDNNGVPREESPAKSALRMMMGESLRQRSHVSGL-ADG 187
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPET 283
+A + ++G+ NLGNTC+ NS++Q LL + +L+ L + G L L LF +T
Sbjct: 188 HA-HAIKGILNLGNTCYLNSLVQCLLVLGKLRARMLGPDTPLGTLGTILYDLFDQTYGVN 246
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGI 343
+++ + +F G D+HELL CL L E+ R N P+ +
Sbjct: 247 NTGGLLDMTWLLAYVRKSDSRFIGAFMQDNHELLCCLRKKLDEED---RGTNPPNMQDDA 303
Query: 344 SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAK 403
+ P D +FGGQ++S + C C SS + F DLS+P+P ++ S + P ++
Sbjct: 304 VT---PTVTDSIFGGQLSSHISCKCCSFSSVSHVAFHDLSVPLPPTQSKSIASPPRTKGY 360
Query: 404 KTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQL 463
K++ + + + H + S S + L +++ PL V S+ Q+
Sbjct: 361 KSQQKIHAELEVDKRNPEKIHTIAEDSDSQSPSELEDVVLVKTSEPLK---VDSTKVEQI 417
Query: 464 L---DSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWLDYIEPQTTG 520
D+V P + TQ +Q D LPQ + + D+ VE+ +D D P+ G
Sbjct: 418 FHSKDAVCRP-LQTQ-KDKVQGETVDFLPQ-NMLPDVKVEE----MDLTKTDAHVPEDIG 470
Query: 521 DVL--DSTWQKSDVSVIQDSTDFAWLD--YIEPETISDEHGLTLENNDVLFVQDSGEQDE 576
L ++ W +S V ++ + A LD + EPE S+ T + V+ S D
Sbjct: 471 PPLRKENAWIESGSDVGKNVS--AVLDDVFSEPEVSSEAKTDTFS----VEVRKSRSSD- 523
Query: 577 VSDDSLINSNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPY-NEEISTTAEK 635
+S D+ N + +D L ++ + + V Q + L Y N +S+T E
Sbjct: 524 ISCDNAQGINSLASIDKYLELHFEAEMVEWTCESCSKVAQKPGINLGKYSNPMMSSTNED 583
Query: 636 ISGEGEAS--SSVVGCRQEE 653
I+ +G+ S S + CR E+
Sbjct: 584 ITVDGDQSELSEKITCRSEQ 603
>gi|125604095|gb|EAZ43420.1| hypothetical protein OsJ_28025 [Oryza sativa Japonica Group]
Length = 794
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 168/383 (43%), Gaps = 87/383 (22%)
Query: 661 DLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPE 720
D+F+EPE + + T++ SSD D +S S++ L + E
Sbjct: 496 DVFSEPEVS------SEAKTDTFSVEVRKSRSSDISCDNAQGINSLASIDKYLELHFEAE 549
Query: 721 LLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQNDIQGSSLTDVDSLC 780
++ W CESCSK +A KP IN G+ SN + S
Sbjct: 550 MV----EWTCESCSK---------------VAQKPGINLGKYSNP----------MMSST 580
Query: 781 NGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQREKGKMKINDAV 840
N D + D + E + +S ++ G+ + ++ V
Sbjct: 581 NEDITVDGDQSELSEKITCRS--------------------------EQSNGRPECHEGV 614
Query: 841 EMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKV 900
+ ++ SC+ ++ QD+ +S S E+ Q A E +++
Sbjct: 615 Q-EAEPSCIPAEKQANLLSGQDQ--------NASILSEERGEQVKLHHGAHQVEENQNEQ 665
Query: 901 EEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY 960
++ N + K+ I+K PP+L IHL R K+ GHV F EI+++ +
Sbjct: 666 KDWN-------KGGIKKHFISKLPPVLVIHLMRSLLGPH----KVIGHVRFKEILDMGLF 714
Query: 961 MDPGCTDHDNYDYRLVGVVEHLGTMR-GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDV 1019
MDP D DN YRLVGVVEH G GH++AYVR P+ + S W+ ASD
Sbjct: 715 MDPSSEDKDNLSYRLVGVVEHRGLGNDAGHFLAYVRASPRQET-----SGSSSWFRASDD 769
Query: 1020 YVREVSLEEVLRCEAYILFYEKI 1042
+REVSLEEVL+CEAY+LFYE++
Sbjct: 770 SIREVSLEEVLKCEAYLLFYERM 792
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 242/560 (43%), Gaps = 62/560 (11%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHA-RQTRHPLVIQWENPHLRWCFPCNTLIPVEK 165
I VCL C C +H HA + H + + +E + +CF C
Sbjct: 93 IMVCLECELRLCA---------NHACIHAMHEEEHSIALYYERLNRVYCFKC-------- 135
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSG--NVNSEIKSESTVVSGSDLDG 223
++A VK G T+ + V E++ S + E + + VSG DG
Sbjct: 136 -------EEAYDIGVKDDDGGMTDNNGVPREESPAKSALRMMMGESLRQRSHVSGL-ADG 187
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPET 283
+A + ++G+ NLGNTC+ NS++Q LL + +L+ L + G L L LF +T
Sbjct: 188 HA-HAIKGILNLGNTCYLNSLVQCLLVLGKLRARMLGPDTPLGTLGTILYDLFDQTYGVN 246
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGI 343
+++ + +F G D+HELL CL L E+ R N P+ +
Sbjct: 247 NTGGLLDMTWLLAYVRKSDSRFIGAFMQDNHELLCCLRKKLDEED---RGTNPPNMQDDA 303
Query: 344 SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAK 403
+ P D +FGGQ++S + C C SS + F DLS+P+P ++ S + P ++
Sbjct: 304 VT---PTVTDSIFGGQLSSHISCKCCSFSSVSHVAFHDLSVPLPPTQSKSIASPPRTKGY 360
Query: 404 KTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQL 463
K++ + + + H + S S + L +++ PL V S+ Q+
Sbjct: 361 KSQQKIHAELEVDKRNPEKIHTIAEDSDSQSPSELEDVVLVKTSEPLK---VDSTKVEQI 417
Query: 464 L---DSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWLDYIEPQTTG 520
D+V P + TQ +Q D LPQ + + D+ VE+ +D D P+ G
Sbjct: 418 FHSKDAVCRP-LQTQ-KDKVQGETVDFLPQ-NMLPDVKVEE----MDLTKTDAHVPEDIG 470
Query: 521 DVL--DSTWQKSDVSVIQDSTDFAWLD--YIEPETISDEHGLTLENNDVLFVQDSGEQDE 576
L ++ W +S V ++ + A LD + EPE S+ T + V+ S D
Sbjct: 471 PSLRKENAWIESGSDVGKNVS--AVLDDVFSEPEVSSEAKTDTFS----VEVRKSRSSD- 523
Query: 577 VSDDSLINSNQIPLLDSKPNLKADSSSGDAGEDELPLVVQDSEVILLPY-NEEISTTAEK 635
+S D+ N + +D L ++ + + V Q + L Y N +S+T E
Sbjct: 524 ISCDNAQGINSLASIDKYLELHFEAEMVEWTCESCSKVAQKPGINLGKYSNPMMSSTNED 583
Query: 636 ISGEGEAS--SSVVGCRQEE 653
I+ +G+ S S + CR E+
Sbjct: 584 ITVDGDQSELSEKITCRSEQ 603
>gi|22779926|ref|NP_690038.1| ubiquitin carboxyl-terminal hydrolase 45 [Mus musculus]
gi|81901063|sp|Q8K387.1|UBP45_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 45; AltName:
Full=Deubiquitinating enzyme 45; AltName: Full=Ubiquitin
thioesterase 45; AltName:
Full=Ubiquitin-specific-processing protease 45
gi|20380011|gb|AAH27768.1| Ubiquitin specific petidase 45 [Mus musculus]
gi|148673608|gb|EDL05555.1| ubiquitin specific petidase 45, isoform CRA_c [Mus musculus]
Length = 813
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 168/382 (43%), Gaps = 79/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + + + + S C +C + +RR G+ V +W+
Sbjct: 38 CQHVSYAVSVNHVKKAVAESLWSVCSEC---LKERRFCDGQP----------VLPADVWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H +RH + + H +VI + WC+ CN EK
Sbjct: 85 CLKCGLQGCGK----NSESQHSLRHFKSSGTESHCVVISLST-WVIWCYECN-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ + + + A+ + E + + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHAFKTQT----GAFSRIIKLCEEKREAGEIKKGK----KGC 185
Query: 227 YV--VRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
V V+G+ NLGNTCFFN+V+QNL L + L E
Sbjct: 186 TVPSVKGITNLGNTCFFNAVIQNLAQTYILFELMNEIKEDGTKFKISLSSAPQLEPLVVE 245
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + E + ++P+ F +C KAP+FKG+QQ DS ELL LL
Sbjct: 246 LSSPGPLTSALF-LFLHSMKEAE-KGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHHLL 303
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 304 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 363
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + ST+ +PF+D+SLP+
Sbjct: 364 MCEECANISTMKDPFIDISLPI 385
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ +T E CSV +++ ++ +++L+ +C + K + S K
Sbjct: 607 SQSYVTTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCEDCTEKRRKCHKETSSAEKKAGG 663
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 664 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCAATCKNIS 722
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKNKVKAKKE--SVGGV 1012
+ Y L G+VEH G+MRGGHY AYV+ G K K+ +GG
Sbjct: 723 VGEKVLYGLYGIVEHSGSMRGGHYTAYVKVRVPSRKLSECITGRKTAAGLKEPDGELGGH 782
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 783 WVHVSDTYVQVVPESRALSAQAYLLFYERI 812
>gi|148673607|gb|EDL05554.1| ubiquitin specific petidase 45, isoform CRA_b [Mus musculus]
Length = 766
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 168/382 (43%), Gaps = 79/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + + + + S C +C + +RR G+ V +W+
Sbjct: 39 CQHVSYAVSVNHVKKAVAESLWSVCSEC---LKERRFCDGQP----------VLPADVWL 85
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H +RH + + H +VI + WC+ CN EK
Sbjct: 86 CLKCGLQGCG----KNSESQHSLRHFKSSGTESHCVVISLST-WVIWCYECN-----EKL 135
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ + + + A+ + E + + G C
Sbjct: 136 STHC-NKKVLAQIVDFLQKHAFKTQT----GAFSRIIKLCEEKREAGEIKKGK----KGC 186
Query: 227 YV--VRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
V V+G+ NLGNTCFFN+V+QNL L + L E
Sbjct: 187 TVPSVKGITNLGNTCFFNAVIQNLAQTYILFELMNEIKEDGTKFKISLSSAPQLEPLVVE 246
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + E + ++P+ F +C KAP+FKG+QQ DS ELL LL
Sbjct: 247 LSSPGPLTSALF-LFLHSMKEAE-KGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHHLL 304
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 305 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 364
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + ST+ +PF+D+SLP+
Sbjct: 365 MCEECANISTMKDPFIDISLPI 386
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ +T E CSV +++ ++ +++L+ +C + K + S K
Sbjct: 560 SQSYVTTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCEDCTEKRRKCHKETSSAEKKAGG 616
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 617 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCAATCKNIS 675
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKNKVKAKKE--SVGGV 1012
+ Y L G+VEH G+MRGGHY AYV+ G K K+ +GG
Sbjct: 676 VGEKVLYGLYGIVEHSGSMRGGHYTAYVKVRVPSRKLSECITGRKTAAGLKEPDGELGGH 735
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 736 WVHVSDTYVQVVPESRALSAQAYLLFYERI 765
>gi|26352998|dbj|BAC40129.1| unnamed protein product [Mus musculus]
Length = 765
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 167/380 (43%), Gaps = 75/380 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + + + + S C +C + +RR G+ V +W+
Sbjct: 38 CQHVSYAVSVNHVKKAVAESLWSVCSEC---LKERRFCDGQP----------VLPADVWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H +RH + + H +VI + WC+ CN EK
Sbjct: 85 CLKCGLQGCG----KNSESQHSLRHFKSSGTESHCVVISLST-WVIWCYECN-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ + + + A+ + E + + G G
Sbjct: 135 STHC-NKKVLAQIVDFLQKHAFKTQT----GAFSRIIKLCEEKREAGEIKKGKK--GCTV 187
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAELT 264
V+G+ NLGNTCFFN+V+QNL L + L EL+
Sbjct: 188 PSVKGITNLGNTCFFNAVIQNLAQTYILFELMNEIKEDGTKFKISLSSAPQLEPLVVELS 247
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL LF + E + ++P+ F +C KAP+FKG+QQ DS ELL LLD
Sbjct: 248 SPGPLTSALF-LFLHSMKEAE-KGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHHLLDA 305
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ +EE + N+P+ + V F+D +F G++ STV C
Sbjct: 306 VRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMC 365
Query: 367 VECGHSSTVYEPFLDLSLPV 386
EC + ST+ +PF+D+SLP+
Sbjct: 366 EECANISTMKDPFIDISLPI 385
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ +T E CSV +++ ++ +++L+ +C + K + S K
Sbjct: 559 SQSYVTTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCEDCTEKRRKCHKETSSAEKKAGG 615
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 616 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCAATCKNIS 674
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKNKVKAKKE--SVGGV 1012
+ Y L G+VEH G+MRGGHY AYV+ G K K+ +GG
Sbjct: 675 VGEKVLYGLYGIVEHSGSMRGGHYTAYVKVRVPSRKLSECITGRKTAAGLKEPDGELGGH 734
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 735 WVHVSDTYVQVVPESRALSAQAYLLFYERI 764
>gi|301788668|ref|XP_002929749.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like
[Ailuropoda melanoleuca]
Length = 817
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 166/380 (43%), Gaps = 75/380 (19%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + + + C +C + +RR G+ V IW+
Sbjct: 38 CQHVSHAISVNHVKKAVAENAWSVCSEC---LKERRFCDGRP----------VLPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + R H + I + WC+ C+ + +
Sbjct: 85 CLKCGFQGCGR----NSESHHSLKHYKSWRTESHCITISLST-WVIWCYECDEKLSTQC- 138
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
NK L++ V ++ ++ + + F E K E T G++
Sbjct: 139 -----NKKVLAQTVDFLQKHVSK-----AQTSTFSRILKLCEEKCE-TGEKRKGRKGSSV 187
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAELT 264
V+G++NLGNTCFFN+VMQNL L + L EL+
Sbjct: 188 PSVKGISNLGNTCFFNAVMQNLAQSYVLMELMNENKENGTKLKIFPSPDSQLDPLIVELS 247
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL +F + ET + ++P+ F +C KAP+FK +QQ DS ELL LLD
Sbjct: 248 SPGPLTSALL-VFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKSFQQQDSQELLHYLLDA 305
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ +EE + N+P+ + V F+D +F G++ STV C
Sbjct: 306 VRTEETKRIQASILKAYNNPTTKTADDDTRKKVKAYGREGVKMNFIDRIFIGELTSTVMC 365
Query: 367 VECGHSSTVYEPFLDLSLPV 386
EC + S+V +PF+D+SLP+
Sbjct: 366 EECANISSVNDPFIDISLPI 385
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEE----INSKIVK 909
SQ IT E CS+ +++ ++ +++L+ NC ++ + ++ K
Sbjct: 611 SQSYITTSKE--CSLQSCLYQ-FTSMELLMGNNKLLCENCTEKKQRSQKETGSAEKKAEG 667
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 668 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNVS 726
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK--------------VKAKKESVGGV 1012
D Y L GVVEH G+MRGGHY AYV+ P ++ VK G
Sbjct: 727 VGDKVLYGLYGVVEHSGSMRGGHYTAYVKVRPPSRKLLEYITGKTYVPDVKEPDSESAGQ 786
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD V+ V L +AY+LFYE+I
Sbjct: 787 WVHVSDTCVQVVPESRALSAQAYLLFYERI 816
>gi|444521620|gb|ELV13191.1| Ubiquitin carboxyl-terminal hydrolase 16 [Tupaia chinensis]
Length = 627
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 107/205 (52%), Gaps = 41/205 (20%)
Query: 221 LDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF--------------- 265
++ + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 58 MNSTSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEP 117
Query: 266 --------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELL
Sbjct: 118 LEINLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFAQVCKKAVRFKGYQQQDSQELL 175
Query: 318 RCLLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIA 361
R LLDG+ +EE + NS + + N+ P FVD +FGG++
Sbjct: 176 RYLLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELT 235
Query: 362 STVRCVECGHSSTVYEPFLDLSLPV 386
ST+ C EC S V+E FLDLSLPV
Sbjct: 236 STIMCDECRTVSLVHESFLDLSLPV 260
>gi|42407641|dbj|BAD08755.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 817
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 84/130 (64%), Gaps = 11/130 (8%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDY 973
A K LI+K PP+L I LKR + G + K+ HV+F EI+++ ++ P D DN Y
Sbjct: 696 AIKTSLISKLPPVLVIQLKRNT----GPI-KVRRHVSFKEILDVGLFLHPSSEDKDNSSY 750
Query: 974 RLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
RLVGVVEHLG +M GHYVAYVR P + W+ ASD +REVSLEEVL+C
Sbjct: 751 RLVGVVEHLGHSMYSGHYVAYVRPSPPQQTNGSSS-----WFWASDTDIREVSLEEVLKC 805
Query: 1033 EAYILFYEKI 1042
EAYILFYE++
Sbjct: 806 EAYILFYERM 815
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 145/352 (41%), Gaps = 32/352 (9%)
Query: 107 IWVCLGCG-HYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEK 165
+ VC+ C H+ G + P+ H+ HA HP+ + +E+P+ +CF C + +
Sbjct: 104 MMVCVECDMHFCIGRFAKKSKPRGHIEEHAFDDGHPVALWYEDPYTGYCFECEDPLTI-- 161
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
GE D K +K + E D+ G V+ S
Sbjct: 162 ---GGEEGD------KGMKVKGEEGCRASGSDSGHG------------CVIGASGSGSGH 200
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL--NAELTFGPLTIALKKLFAETKPET 283
+RG+ N GNTC+ N+V+Q LL + +L+ +A G L I L LF T+ +
Sbjct: 201 GCAIRGIPNFGNTCYLNAVLQCLLVLGKLRARMSGPDAPPPSGMLGIILHDLFVATESVS 260
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGI 343
R++++P GC+ +F+G DSHELL CL D L EE R N +
Sbjct: 261 YTRDLLDPVMLLGCVRHYKSEFQGNTMQDSHELLCCLRDSLIEEESKTRPDNMQQDA--- 317
Query: 344 SSNQGPVFVDYVFGGQIASTVRCVECGHSST---VYEPFLDLSLPVPTKKAPSKKTQPAS 400
S P +D +F GQ+ T C C S + F DL + +P + Q +
Sbjct: 318 PSAVVPTVIDSIFRGQLFVTTLCKYCSFESVSQGSQDAFYDLCVALPLQNERCISQQKIA 377
Query: 401 RAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSE 452
+ + + +I A V + ++ + S+ L + PL +
Sbjct: 378 IEQFPTIDKTNTEKIHAISGGSDPQVPASELGDMVMVKTSEPLVVDSNPLDQ 429
>gi|125562277|gb|EAZ07725.1| hypothetical protein OsI_29980 [Oryza sativa Indica Group]
Length = 869
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 152/350 (43%), Gaps = 87/350 (24%)
Query: 702 DSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGE 761
D++S S+E CL + E++ W CE+CS+ R+ + K ++ +
Sbjct: 596 DNNSLASIEECLELHFEAEMVE----WKCENCSEIAHRRSTTSGKDSEQMMAS------- 644
Query: 762 TSNQNDIQGSSLTDVDSL-CNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTN 820
TS + G D + C + +N D SG+ D + + A ++
Sbjct: 645 TSENKIVDGDQTEQSDKIACQSEQSSNLD-----------SGEQDLASDNTANKKNECHE 693
Query: 821 DVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEK 880
V VP SCL + E + +Q G G +S K
Sbjct: 694 GVQEVVP-------------------SCL----AAEELANQLSGQ----GQNASSLDQVK 726
Query: 881 VYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARG 940
+ S Q+ E E+ I ++ INK PP+ IHLKR SQ
Sbjct: 727 LDHSADQVGPNQKEREDRYQRGIQTR------------FINKLPPVFAIHLKR-SQ---- 769
Query: 941 RLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLG-TMRGGHYVAYVR---- 995
K+ GHV+F EI+++ +MDP D DN Y LVGV+EH+G + R GH VAYVR
Sbjct: 770 LTGKVRGHVSFEEILDVGQFMDPSSEDKDNSSYHLVGVIEHIGPSTRSGHMVAYVRPNQE 829
Query: 996 ---GGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
GGP WY ASD +R+VSLEEVL+CEA + FYE+I
Sbjct: 830 QPHGGP------------SPWYCASDTNIRQVSLEEVLKCEASLFFYERI 867
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 141/340 (41%), Gaps = 59/340 (17%)
Query: 98 GSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQW-ENPHLRWCFP 156
G ++ + I VC GC + C P H HA++ H V W NP++ +CF
Sbjct: 206 GCTITGNTHIMVCTGCNKHFCTRAEAMKKPYGHARLHAQKCEHHWVGLWYSNPYMGYCFK 265
Query: 157 CNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVV 216
C E ++ + E V FG + E
Sbjct: 266 C--------------------EFEWILGAPNAERGMV------FGKEAFDQE-------- 291
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLF 276
S L V+RG+ NLGNTC+ N+++Q L + +L+ L ++ G + ALK+LF
Sbjct: 292 --SGLAKRHGCVIRGIPNLGNTCYVNALLQCLFVLEKLRARMLASDAPSGFVGSALKELF 349
Query: 277 AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS 336
E + +NP F + QF G DS+ELL + + L EE K
Sbjct: 350 QEVNSVNNAKRPLNPTKFLDRVRMLNAQFAGSDMEDSYELLCFVQNQLEKEE----KSMI 405
Query: 337 PSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKT 396
P+ + VD +F Q+++T+ C C ++S +E DLS+P+ PS+
Sbjct: 406 PAVSTTV--------VDSIFRVQLSATISCRRCSYNSVSHEVMYDLSVPL-----PSRNI 452
Query: 397 QPASRAK-KTKLPPKKSGRIRAKGTKDTHAVTTQSISNLS 435
SR K KL PK + T+ HA+ S+++
Sbjct: 453 SCMSREKIGIKLFPK----VDMSNTEIVHAIAEGRDSHIT 488
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 100 SLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHAR----QTRHPLVIQWENPHLRWCF 155
S VD +I VC+ C C G G PQ H HA+ +H + + P +CF
Sbjct: 91 SKVDKSSIMVCIDCSLPFCIGDGTMNKPQGHAQEHAQFYAHLEKHCVAALFSKPDTLYCF 150
Query: 156 PCNTLIPVEKTEENGENKDALSEV 179
C + +E ++ E+ + +V
Sbjct: 151 ICERCLNLEMSDMEAESDSSSDQV 174
>gi|125604091|gb|EAZ43416.1| hypothetical protein OsJ_28021 [Oryza sativa Japonica Group]
Length = 784
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 84/130 (64%), Gaps = 11/130 (8%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDY 973
A K LI+K PP+L I LKR + G + K+ HV+F EI+++ ++ P D DN Y
Sbjct: 663 AIKTSLISKLPPVLVIQLKRNT----GPI-KVRRHVSFKEILDVGLFLHPSSEDKDNSSY 717
Query: 974 RLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
RLVGVVEHLG +M GHYVAYVR P + W+ ASD +REVSLEEVL+C
Sbjct: 718 RLVGVVEHLGHSMYSGHYVAYVRPSPPQQTNGSSS-----WFWASDTDIREVSLEEVLKC 772
Query: 1033 EAYILFYEKI 1042
EAYILFYE++
Sbjct: 773 EAYILFYERM 782
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 145/352 (41%), Gaps = 32/352 (9%)
Query: 107 IWVCLGCG-HYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEK 165
+ VC+ C H+ G + P+ H+ HA HP+ + +E+P+ +CF C + +
Sbjct: 104 MMVCVECDMHFCIGRFAKKSKPRGHIEEHAFDDGHPVALWYEDPYTGYCFECEDPLTI-- 161
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
GE D K +K + E D+ G V+ S
Sbjct: 162 ---GGEEGD------KGMKVKGEEGCRASGSDSGHG------------CVIGASGSGSGH 200
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL--NAELTFGPLTIALKKLFAETKPET 283
+RG+ N GNTC+ N+V+Q LL + +L+ +A G L I L LF T+ +
Sbjct: 201 GCAIRGIPNFGNTCYLNAVLQCLLVLGKLRARMSGPDAPPPSGMLGIILHDLFVATESVS 260
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGI 343
R++++P GC+ +F+G DSHELL CL D L EE R N +
Sbjct: 261 YTRDLLDPVMLLGCVRHYKSEFQGNTMQDSHELLCCLRDSLIEEESKTRPDNMQQDA--- 317
Query: 344 SSNQGPVFVDYVFGGQIASTVRCVECGHSST---VYEPFLDLSLPVPTKKAPSKKTQPAS 400
S P +D +F GQ+ T C C S + F DL + +P + Q +
Sbjct: 318 PSAVVPTVIDSIFRGQLFVTTLCKYCSFESVSQGSQDAFYDLCVALPLQNERCISQQKIA 377
Query: 401 RAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSE 452
+ + + +I A V + ++ + S+ L + PL +
Sbjct: 378 IEQFPTIDKTNTEKIHAISGGSDPQVPASELGDMVMVKTSEPLVVDSNPLDQ 429
>gi|42407639|dbj|BAD08753.1| ubiquitin-specific protease-like [Oryza sativa Japonica Group]
gi|125604089|gb|EAZ43414.1| hypothetical protein OsJ_28019 [Oryza sativa Japonica Group]
Length = 869
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 153/350 (43%), Gaps = 87/350 (24%)
Query: 702 DSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGE 761
D++S S+E CL + E++ W CE+CS+ +R+ + K ++ +
Sbjct: 596 DNNSLASIEECLELHFEAEMVE----WKCENCSEIARRRSTTSGKDSEQMMAS------- 644
Query: 762 TSNQNDIQGSSLTDVDSL-CNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTN 820
TS + G D + C + +N D SG+ D + + A ++
Sbjct: 645 TSENKIVDGDQTEQSDKIACQSEQSSNLD-----------SGEQDLASDNTANKKNECHE 693
Query: 821 DVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEK 880
V VP SCL + E + +Q G G +S K
Sbjct: 694 GVQEVVP-------------------SCL----AAEELANQLSGQ----GQNASSLDQVK 726
Query: 881 VYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARG 940
+ S Q+ E E+ I ++ INK PP+ IHLKR SQ
Sbjct: 727 LDHSADQVGPNQKEREDRYQGGIQTR------------FINKLPPVFAIHLKR-SQ---- 769
Query: 941 RLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLG-TMRGGHYVAYVR---- 995
K+ GHV+F EI+++ +MDP D DN Y LVGV+EH+G + R GH VAYVR
Sbjct: 770 LTGKVRGHVSFEEILDVGQFMDPSSEDKDNSSYHLVGVIEHIGPSTRSGHMVAYVRPNQE 829
Query: 996 ---GGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
GGP WY ASD +R+VSLEEVL+CEA + FYE+I
Sbjct: 830 QPHGGP------------SPWYCASDTNIRQVSLEEVLKCEASLFFYERI 867
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 141/340 (41%), Gaps = 59/340 (17%)
Query: 98 GSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQW-ENPHLRWCFP 156
G ++ + I VC GC + C P H HA++ H V W NP++ +CF
Sbjct: 206 GCTITGNTHIMVCTGCNKHFCTRAEAMKKPYGHARLHAQKCEHHWVGLWYSNPYMGYCFK 265
Query: 157 CNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVV 216
C E ++ + E V FG + E
Sbjct: 266 C--------------------EFEWILGAPNAERGMV------FGKEAFDQE-------- 291
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLF 276
S L V+RG+ NLGNTC+ N+++Q L + +L+ L ++ G + ALK+LF
Sbjct: 292 --SGLAKRHGCVIRGIPNLGNTCYVNALLQCLFVLEKLRARMLASDAPSGFVGSALKELF 349
Query: 277 AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS 336
E + +NP F + QF G DS+ELL + + L EE K
Sbjct: 350 QEVNSVNNAQRPLNPTKFLDRVRMLNAQFAGSDMEDSYELLCFVQNQLEKEE----KSMI 405
Query: 337 PSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKT 396
P+ + VD +F Q+++T+ C C ++S +E DLS+P+ PS+
Sbjct: 406 PAVSTTV--------VDSIFRVQLSATISCRRCSYNSVSHEVMYDLSVPL-----PSRNI 452
Query: 397 QPASRAK-KTKLPPKKSGRIRAKGTKDTHAVTTQSISNLS 435
SR K KL PK + T+ HA+ S+++
Sbjct: 453 SCMSREKIGIKLFPK----VDMSNTEIVHAIAEGRDSHIT 488
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 100 SLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHAR----QTRHPLVIQWENPHLRWCF 155
S VD +I VC+ C C G G PQ H HA+ +H + + P +CF
Sbjct: 91 SKVDKSSIMVCIDCSLPFCIGDGTMNKPQGHAQEHAQFYAHLEKHCVAALFSKPDTLYCF 150
Query: 156 PCNTLIPVEKTEENGENKDALSEV 179
C + +E ++ E+ + +V
Sbjct: 151 ICERCLNLEMSDMEAESDSSSDQV 174
>gi|297726595|ref|NP_001175661.1| Os08g0527600 [Oryza sativa Japonica Group]
gi|255678592|dbj|BAH94389.1| Os08g0527600 [Oryza sativa Japonica Group]
Length = 317
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 84/132 (63%), Gaps = 9/132 (6%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNY 971
+ A K L +K PP+L +HLKR + ++S GHV+F E ++++ +M P D DN
Sbjct: 192 KGAIKTCLFSKLPPVLALHLKRNLWPLKLKVS---GHVSFKETLDVKLFMHPSSEDKDNS 248
Query: 972 DYRLVGVVEHLGT-MRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
YRLVGVVEHLG M GH+VAYVR + +W+ ASD +REVSLEEVL
Sbjct: 249 SYRLVGVVEHLGLCMDAGHFVAYVRPSCPQQTNG-----SSLWFCASDADIREVSLEEVL 303
Query: 1031 RCEAYILFYEKI 1042
+CEAY+LFYE+I
Sbjct: 304 KCEAYLLFYERI 315
>gi|414869615|tpg|DAA48172.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 1054
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 176/407 (43%), Gaps = 58/407 (14%)
Query: 15 KQKQAAARAPKSVLQQSKPVESTDDGVPVMK------ERKPCPHLDKGIDSDKISVKIGS 68
++ + + R +LQ +P E+ +PV K +R C H+ +D + + +
Sbjct: 387 EEAEGSPRNKSPLLQDKRPSEA----LPVAKVESTDEKRCKCNHVIDVLDIHGLVGSLTT 442
Query: 69 SDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQ 128
D C DCR + K + + + +C+ C + C GVG P
Sbjct: 443 KDAWICCDCR------------SEDEKLIFKARPEKSDLLICVRCYRHLCCGVGSIAYPF 490
Query: 129 SHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVE-KTEENGENKD--ALSEVVKLIKG 185
H HA + H + + +P R+CF CN +P+ K+ E+G D + ++V+ +
Sbjct: 491 GHSRAHALKKEHWFAVLYSDPERRYCFKCNAEVPMPVKSGEDGNEVDIEVIRDIVRQLPS 550
Query: 186 R------STEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC----------YVV 229
S IS + E G V +E VV+ D C Y +
Sbjct: 551 HPSSVVISPVISQTEPEVINPGEEEV-AESAPSGFVVAVDPADRWPCYESKSSDAQGYAI 609
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVI 289
+G+ NLGNTC+ ++V+Q L + +L++ L + +T L++LF E G V+
Sbjct: 610 KGIPNLGNTCYLSAVLQCLFVLGKLRERMLTLDGPKSLITEVLEELFLEASAAGG---VL 666
Query: 290 NPRSFFGCICSKAPQ-FKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQG 348
NP C+ + P F+ DSH+LL A R + S+ N +
Sbjct: 667 NPIKLLNCLNLRDPSGFQIGTMEDSHDLL-----------TALRAIWNESDKNNNKQSDA 715
Query: 349 PVFVDYVFGGQIASTVRCVECGHSS-TVYEPFLDLSLPVPTKKAPSK 394
P +D +F ++A T+ C +CGHSS V PF DL L P+K P+K
Sbjct: 716 PTMMDSIFRFEMARTLSCKKCGHSSAAVRYPFEDLLLGFPSKGHPTK 762
Score = 106 bits (264), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 98/165 (59%), Gaps = 15/165 (9%)
Query: 886 SQLVAGNCESEESKVEEINSKIVK---VKRDATKRVLINK---APPILTIHLKRFSQDAR 939
++L+ N +++SK ++ + VK K D ++I++ PP+LT+ LKR S
Sbjct: 885 TELLGTNQTADDSKQLMMHPENVKESEQKDDGGDNIMIHRFATLPPVLTLQLKRTSHHIV 944
Query: 940 GRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEH--LGTMRGGHYVAYVRGG 997
G SK++ HV F E +++ +MDP C D + +RL VV H +G+++ GHY+AYVR
Sbjct: 945 G--SKISDHVRFMEYLDVERFMDPSCADKGSTLFRLAAVVVHIGMGSLKSGHYIAYVRA- 1001
Query: 998 PKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
K+ ++E W+ A D +R V++E+VL +AYILFYE++
Sbjct: 1002 --RKLGCQQEEAS--WFCADDSQIRRVTIEQVLNSQAYILFYERM 1042
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 103 DSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIP 162
+ + + +C+GC + C GVG P H HA + +H + + +P +CF CN +P
Sbjct: 187 EKRDLLICVGCYSHLCCGVGSIAYPFGHSRSHALKKKHWFAVLYSDPERGYCFKCNAEVP 246
Query: 163 -VEKTEENGENKDALSEVVKLIKGRSTEISSVD 194
+ K E+G N+ L E+++ I + + SVD
Sbjct: 247 MLRKCGEDG-NEGGL-ELIRDIVSQLPDQPSVD 277
>gi|321468000|gb|EFX78987.1| hypothetical protein DAPPUDRAFT_319910 [Daphnia pulex]
Length = 737
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 125/278 (44%), Gaps = 91/278 (32%)
Query: 216 VSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLA---MSQLQDY--------------- 257
++G D + V+GL+NLGNTCFFNSVMQ L ++QL D
Sbjct: 58 INGKDSVSESLPSVKGLSNLGNTCFFNSVMQVLSQTHWLTQLLDMEVRDGHVVQLKGSDG 117
Query: 258 -------------------------------FLNAE---LTFG---PLTIALKKLFAETK 280
L AE +T G PLT+ L +
Sbjct: 118 NSSCSSSCSAFQELENCSPLVNSSENTSVEELLVAEPISVTLGSGKPLTLTLASFLKDMH 177
Query: 281 -PE----TGLR----NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
P TG R + + P S F +C K+PQF+G+QQ D+HELLR LLDG+ +EE+
Sbjct: 178 CPAITGGTGKRRQSLSTVTPSSLFNQVCKKSPQFRGFQQQDAHELLRHLLDGIRTEEITR 237
Query: 332 RK--------------RNSPSEGNGISSNQGPV--------FVDYVFGGQIASTVRCVEC 369
R+ +N P+E + + + V FVD +FGGQ+ STV C C
Sbjct: 238 RRHAIMSHFNLPLTVVKNQPTEVDPLLKRKLKVYGKESAHTFVDQLFGGQLLSTVICDSC 297
Query: 370 GHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKL 407
HS + EPF+DLSLPV K+P P S +KT +
Sbjct: 298 HHSYQILEPFMDLSLPVSEDKSP-----PTSHKRKTNV 330
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 43/181 (23%)
Query: 904 NSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDP 963
N+KI V A+K++LI P +LT+HLKRF+Q+ L K HV+F +L P+
Sbjct: 557 NTKIPTVYSVASKQLLIFAPPALLTLHLKRFTQNGIA-LRKAQKHVDFPLRFDLAPFCSA 615
Query: 964 GC-------TDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP------------------ 998
D Y L GV+EH G + GHY A+V+ P
Sbjct: 616 AAAGVSSIPADQKEVIYSLYGVIEHSGRLSSGHYTAFVKVRPVTSHPLTQFLQREPMQTE 675
Query: 999 ---------KNKVKAKKESV--------GGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
++ A++ +V G WY+ SD +V VS E+VL+ +A++LFYE+
Sbjct: 676 DLLRLRDQLSERLLAERSTVEDSSEYSSEGTWYYCSDSHVMAVSEEKVLKSQAFLLFYER 735
Query: 1042 I 1042
+
Sbjct: 736 V 736
>gi|125604093|gb|EAZ43418.1| hypothetical protein OsJ_28023 [Oryza sativa Japonica Group]
Length = 835
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 90/145 (62%), Gaps = 9/145 (6%)
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLR 958
+VEE + A K L +K PP+L +HLKR + K++GHV+F E ++++
Sbjct: 697 QVEENQYDRPDRNKGAIKTCLFSKLPPVLALHLKRNLWPLK---LKVSGHVSFKETLDVK 753
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHAS 1017
+M P D DN YRLVGVVEHLG M GH+VAYVR P + S +W+ AS
Sbjct: 754 LFMHPSSEDKDNSSYRLVGVVEHLGLCMDAGHFVAYVR--PSCPQQTNGSS---LWFCAS 808
Query: 1018 DVYVREVSLEEVLRCEAYILFYEKI 1042
D +REVSLEEVL+CEAY+LFYE+I
Sbjct: 809 DADIREVSLEEVLKCEAYLLFYERI 833
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 54/353 (15%)
Query: 104 SKAIWVCLGCGHYAC-GGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIP 162
S + VC CG C GG+ P H+ HA + H + ++ E+P +CF C
Sbjct: 229 SNLMMVCPECGWCFCVGGLAHRAKPLGHIREHAYRRAHWVALRCEDPCEGYCFEC----- 283
Query: 163 VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLD 222
+D+L+ I+ + + +G
Sbjct: 284 ----------EDSLA-----IESQMVADDGAGGGEEGYGC-------------------- 308
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPE 282
VV G+ NLGNTC+ N+++Q LL + +L+ L G L L LF T
Sbjct: 309 -----VVTGMPNLGNTCYLNALLQCLLVLGKLRARILGPGAPSGVLGDLLHDLFVGTNGP 363
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+ R +++P C+ + PQF+G D HELL CL DGL +E RK + G
Sbjct: 364 SYARRLLDPAMLLRCVRFRYPQFRGIAMQDCHELLCCLRDGLDEDE---RKWRAGKMQQG 420
Query: 343 ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASR- 401
S P +D +F GQ++ T+ C C S E F DLS+P+P K P++ R
Sbjct: 421 APSAVAPTVIDSIFAGQLSVTLSCKCCSFKSDSEEVFHDLSMPLPPKGTPARSVASPPRN 480
Query: 402 ---AKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSIS-SKSQSLTESTAPL 450
+ K + I T+ HA++ + + S S+ + +++ PL
Sbjct: 481 GRCISQQKTHMELFPAINKTNTEKIHAISEGGDAQVPASESEHMVMVKTSEPL 533
>gi|125562282|gb|EAZ07730.1| hypothetical protein OsI_29985 [Oryza sativa Indica Group]
Length = 244
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 84/132 (63%), Gaps = 9/132 (6%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNY 971
+ A K L +K PP+L +HLKR + ++S GHV+F E ++++ +M P D DN
Sbjct: 119 KGAIKTCLFSKLPPVLALHLKRNLWPLKLKVS---GHVSFKETLDVKLFMHPSSEDKDNS 175
Query: 972 DYRLVGVVEHLGT-MRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
YRLVGVVEHLG M GH+VAYVR + +W+ ASD +REVSLEEVL
Sbjct: 176 SYRLVGVVEHLGLCMDAGHFVAYVRPSCPQQTNG-----SSLWFCASDADIREVSLEEVL 230
Query: 1031 RCEAYILFYEKI 1042
+CEAY+LFYE+I
Sbjct: 231 KCEAYLLFYERI 242
>gi|218201495|gb|EEC83922.1| hypothetical protein OsI_29989 [Oryza sativa Indica Group]
Length = 732
Score = 122 bits (307), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 160/384 (41%), Gaps = 63/384 (16%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
I+VCLGC C H HA T+H + + + NP++ CF C
Sbjct: 91 IFVCLGCEKPFC---------TVHSSLHAESTKHLVGLVYHNPYVACCFLC--------- 132
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
SE LI G G+ + + + + G+A
Sbjct: 133 ----------SETFVLI-----------------GEGDKRMPVDKAAGGYASESVIGHA- 164
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
+ ++G+ NLGNTC+ NS+MQ LL + +L+ L + G L AL LF +T
Sbjct: 165 HAIKGIPNLGNTCYLNSLMQCLLVLGKLRARMLGPDAPSGTLGTALHDLFEQTYSVNNAT 224
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++ C+C+ PQF G HD+HELL CL L EE R R P+ + +
Sbjct: 225 GLLETSLLLDCVCNLDPQFVGGFMHDNHELLCCLRKNLDEEE---RMRTPPNMQDSSAGA 281
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
P + +FGGQ+ T C C S + F DLS+PVP KK P+K + + +
Sbjct: 282 VPPTVFNSIFGGQLFVTRSCKCCSFCSVSHAVFYDLSVPVPPKKPPAKSVESTPWIEGHR 341
Query: 407 LPPK----KSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQ 462
PK + I + T+ TH + + S+ + K + +++ PL + SQ
Sbjct: 342 SQPKICINQFEAIHKRNTEKTHRIVEDADSDPASELKDMVMVKTSEPLEVDYTEVEQISQ 401
Query: 463 LLDSVGSPTVATQCGSALQNVPAD 486
D V P QNV AD
Sbjct: 402 SKDYVQDP----------QNVLAD 415
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 31/188 (16%)
Query: 858 ITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKR 917
++ QD+ + ++D G +K++ S Q+ C++E+ K + +
Sbjct: 571 LSSQDQNATTLD----EGRGKQKLHHSAHQV--EECQNEQ-----------KDRNKGATQ 613
Query: 918 VLINKAPPILTIHLKR--FSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRL 975
I+K P +LTIHL R D K+ GHV+F EI+++ MDP D DN YRL
Sbjct: 614 TRISKLPLVLTIHLMRSLLGPD------KVMGHVSFKEILDMGLCMDPSSEDKDNSIYRL 667
Query: 976 VGVVEHLGTMR-GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
GV+EH G + GH+VAYVR P+ + W+ ASD +REVSLEEVL+CEA
Sbjct: 668 AGVIEHHGRGKDSGHFVAYVRPSPRQQTNGSSS-----WFCASDTDIREVSLEEVLKCEA 722
Query: 1035 YILFYEKI 1042
Y+LFYE++
Sbjct: 723 YLLFYERM 730
>gi|355727916|gb|AES09353.1| ubiquitin specific peptidase 16 [Mustela putorius furo]
Length = 650
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 104/200 (52%), Gaps = 47/200 (23%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 20 VKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPP 79
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR LLDG+
Sbjct: 80 GPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGMR 137
Query: 326 SEELAFRKRNSP----SEGNGI---------------SSNQGPVFVDYVFGGQIASTVRC 366
+EE ++R S + GN P FVD +FGG++ ST+ C
Sbjct: 138 AEE---QQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRIFGGELTSTIMC 194
Query: 367 VECGHSSTVYEPFLDLSLPV 386
EC S V+E FLDLSLPV
Sbjct: 195 DECRTVSLVHESFLDLSLPV 214
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N HV F EI++L P+ C
Sbjct: 503 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHVKFPEILDLAPFCTLKCKNVA 561
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + + +S G W
Sbjct: 562 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARAANSHLSNLVLHGDIPQDFEMQSTKGQW 621
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE++
Sbjct: 622 FHISDTHVQAVPTTKVLNSQAYLLFYERV 650
>gi|42407958|dbj|BAD09096.1| ubiquitin-specific protease-like [Oryza sativa Japonica Group]
Length = 902
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 160/384 (41%), Gaps = 63/384 (16%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
I+VCLGC C H HA T+H + + + NP++ CF C
Sbjct: 261 IFVCLGCEKPFC---------TVHSSLHAESTKHLVGLVYHNPYVACCFLC--------- 302
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
SE LI G G+ + + + + G+A
Sbjct: 303 ----------SETFVLI-----------------GEGDKRMPVDKAAGGYASESVIGHA- 334
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
+ ++G+ NLGNTC+ NS+MQ LL + +L+ L + G L AL LF +T
Sbjct: 335 HAIKGIPNLGNTCYLNSLMQCLLVLGKLRARMLGPDAPSGTLGTALHDLFEQTYSVNNAT 394
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++ C+C+ PQF G HD+HELL CL L EE R R P+ + +
Sbjct: 395 GLLETSLLLDCVCNLDPQFVGGFMHDNHELLCCLRKNLDEEE---RMRTPPNMQDSSAGA 451
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
P + +FGGQ+ T C C S + F DLS+PVP KK P+K + + +
Sbjct: 452 VPPTVFNSIFGGQLFVTRSCKCCSFCSVSHAVFYDLSVPVPPKKPPAKSVESTPWIEGHR 511
Query: 407 LPPK----KSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQ 462
PK + I + T+ TH + + S+ + K + +++ PL + SQ
Sbjct: 512 SQPKICINQFEAIHKRNTEKTHRIVEDADSDPASELKDMVMVKTSEPLEVDYTEVEQISQ 571
Query: 463 LLDSVGSPTVATQCGSALQNVPAD 486
D V P QNV AD
Sbjct: 572 SKDYVQDP----------QNVLAD 585
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 27/186 (14%)
Query: 858 ITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKR 917
++ QD+ + ++D G +K++ S Q+ C++E+ K + +
Sbjct: 741 LSSQDQNATTLD----EGRGKQKLHHSAHQV--EECQNEQ-----------KDRNKGATQ 783
Query: 918 VLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVG 977
I+K P +LTIHL R K+ GHV+F EI+++ +MDP D DN YRL G
Sbjct: 784 TRISKLPLVLTIHLMRSLLGP----DKVMGHVSFKEILDMGLFMDPSSEDKDNSIYRLAG 839
Query: 978 VVEHLGTMR-GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
V+EH G + GH+VAYVR P+ + W+ ASD +REVSLEEVL+CEAY+
Sbjct: 840 VIEHHGRGKDSGHFVAYVRPSPRQQTNGSSS-----WFCASDTDIREVSLEEVLKCEAYL 894
Query: 1037 LFYEKI 1042
LFYE++
Sbjct: 895 LFYERM 900
>gi|11993461|gb|AAG42749.1|AF302658_1 ubiquitin-specific protease 1, partial [Arabidopsis thaliana]
Length = 154
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 68/83 (81%)
Query: 903 INSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMD 962
++S+ V VKRDA K+VLINKAPP+LTIHLKRFSQDARGR+SKL+GHV+F E I+L YMD
Sbjct: 72 VDSEEVIVKRDARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMD 131
Query: 963 PGCTDHDNYDYRLVGVVEHLGTM 985
C++ D YRL G+VEHLG M
Sbjct: 132 TRCSEEDEPVYRLAGLVEHLGAM 154
>gi|115477429|ref|NP_001062310.1| Os08g0528100 [Oryza sativa Japonica Group]
gi|113624279|dbj|BAF24224.1| Os08g0528100 [Oryza sativa Japonica Group]
Length = 946
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 160/384 (41%), Gaps = 63/384 (16%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
I+VCLGC C H HA T+H + + + NP++ CF C
Sbjct: 287 IFVCLGCEKPFC---------TVHSSLHAESTKHLVGLVYHNPYVACCFLC--------- 328
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
SE LI G G+ + + + + G+A
Sbjct: 329 ----------SETFVLI-----------------GEGDKRMPVDKAAGGYASESVIGHA- 360
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
+ ++G+ NLGNTC+ NS+MQ LL + +L+ L + G L AL LF +T
Sbjct: 361 HAIKGIPNLGNTCYLNSLMQCLLVLGKLRARMLGPDAPSGTLGTALHDLFEQTYSVNNAT 420
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++ C+C+ PQF G HD+HELL CL L EE R R P+ + +
Sbjct: 421 GLLETSLLLDCVCNLDPQFVGGFMHDNHELLCCLRKNLDEEE---RMRTPPNMQDSSAGA 477
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
P + +FGGQ+ T C C S + F DLS+PVP KK P+K + + +
Sbjct: 478 VPPTVFNSIFGGQLFVTRSCKCCSFCSVSHAVFYDLSVPVPPKKPPAKSVESTPWIEGHR 537
Query: 407 LPPK----KSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQ 462
PK + I + T+ TH + + S+ + K + +++ PL + SQ
Sbjct: 538 SQPKICINQFEAIHKRNTEKTHRIVEDADSDPASELKDMVMVKTSEPLEVDYTEVEQISQ 597
Query: 463 LLDSVGSPTVATQCGSALQNVPAD 486
D V P QNV AD
Sbjct: 598 SKDYVQDP----------QNVLAD 611
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 27/186 (14%)
Query: 858 ITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKR 917
++ QD+ + ++D G +K++ S Q+ C++E+ K + +
Sbjct: 785 LSSQDQNATTLD----EGRGKQKLHHSAHQV--EECQNEQ-----------KDRNKGATQ 827
Query: 918 VLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVG 977
I+K P +LTIHL R K+ GHV+F EI+++ +MDP D DN YRL G
Sbjct: 828 TRISKLPLVLTIHLMRSLLGP----DKVMGHVSFKEILDMGLFMDPSSEDKDNSIYRLAG 883
Query: 978 VVEHLGTMR-GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
V+EH G + GH+VAYVR P+ + W+ ASD +REVSLEEVL+CEAY+
Sbjct: 884 VIEHHGRGKDSGHFVAYVRPSPRQQTNGSSS-----WFCASDTDIREVSLEEVLKCEAYL 938
Query: 1037 LFYEKI 1042
LFYE++
Sbjct: 939 LFYERM 944
>gi|222640906|gb|EEE69038.1| hypothetical protein OsJ_28028 [Oryza sativa Japonica Group]
Length = 862
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 160/384 (41%), Gaps = 63/384 (16%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
I+VCLGC C H HA T+H + + + NP++ CF C
Sbjct: 221 IFVCLGCEKPFC---------TVHSSLHAESTKHLVGLVYHNPYVACCFLC--------- 262
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
SE LI G G+ + + + + G+A
Sbjct: 263 ----------SETFVLI-----------------GEGDKRMPVDKAAGGYASESVIGHA- 294
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
+ ++G+ NLGNTC+ NS+MQ LL + +L+ L + G L AL LF +T
Sbjct: 295 HAIKGIPNLGNTCYLNSLMQCLLVLGKLRARMLGPDAPSGTLGTALHDLFEQTYSVNNAT 354
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++ C+C+ PQF G HD+HELL CL L EE R R P+ + +
Sbjct: 355 GLLETSLLLDCVCNLDPQFVGGFMHDNHELLCCLRKNLDEEE---RMRTPPNMQDSSAGA 411
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
P + +FGGQ+ T C C S + F DLS+PVP KK P+K + + +
Sbjct: 412 VPPTVFNSIFGGQLFVTRSCKCCSFCSVSHAVFYDLSVPVPPKKPPAKSVESTPWIEGHR 471
Query: 407 LPPK----KSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQ 462
PK + I + T+ TH + + S+ + K + +++ PL + SQ
Sbjct: 472 SQPKICINQFEAIHKRNTEKTHRIVEDADSDPASELKDMVMVKTSEPLEVDYTEVEQISQ 531
Query: 463 LLDSVGSPTVATQCGSALQNVPAD 486
D V P QNV AD
Sbjct: 532 SKDYVQDP----------QNVLAD 545
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 27/186 (14%)
Query: 858 ITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKR 917
++ QD+ + ++D G +K++ S Q+ C++E+ K + +
Sbjct: 701 LSSQDQNATTLD----EGRGKQKLHHSAHQV--EECQNEQ-----------KDRNKGATQ 743
Query: 918 VLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVG 977
I+K P +LTIHL R K+ GHV+F EI+++ +MDP D DN YRL G
Sbjct: 744 TRISKLPLVLTIHLMRSLLGP----DKVMGHVSFKEILDMGLFMDPSSEDKDNSIYRLAG 799
Query: 978 VVEHLGTMR-GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
V+EH G + GH+VAYVR P+ + W+ ASD +REVSLEEVL+CEAY+
Sbjct: 800 VIEHHGRGKDSGHFVAYVRPSPRQQTNGSSS-----WFCASDTDIREVSLEEVLKCEAYL 854
Query: 1037 LFYEKI 1042
LFYE++
Sbjct: 855 LFYERM 860
>gi|125562278|gb|EAZ07726.1| hypothetical protein OsI_29981 [Oryza sativa Indica Group]
Length = 817
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 166/353 (47%), Gaps = 42/353 (11%)
Query: 698 DEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLI 757
DE +D +S VS+E CL I+ E++ W CE+CSK Q+
Sbjct: 497 DEAEDINSLVSIEECLKLHIESEMIE----WTCENCSKVAQK------------------ 534
Query: 758 NGGETSNQNDIQGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGK--TDCFNQDCAEVE 815
S ++ Q + T+V+ GD +D T L S + +C +
Sbjct: 535 -ASTISGKDGEQMMASTNVNRTVYGDQAEQSDRKTCQRELSSDLIRLSVECSSSSSQPHG 593
Query: 816 SGLTNDVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESI--TDQDEGSCSVDGATS 873
SG+ N PAV + G+ +VE S SSC + E + +D SC + +
Sbjct: 594 SGVQNHDMPAVDIKTSGETSGMSSVEKDS-SSCSIANKKPECLGGAQEDASSCRLTEKQA 652
Query: 874 SGYSAEKVYQSDSQLVAGN---CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIH 930
+ S + S GN ++EE A LI+K PP+L I
Sbjct: 653 NLLSVQCQNISIEDQERGNQVNLGHNAHQLEENQYDQQDRNEGAILTCLISKLPPVLVIQ 712
Query: 931 LKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLG-TMRGGH 989
L R + G L K++GHV+F EI+++ P+MDP D + YRLVGV+E+ G ++ G
Sbjct: 713 LNR----SLGPL-KVSGHVSFKEILDVEPFMDPSSEDKFSSRYRLVGVIENRGLSIDIGQ 767
Query: 990 YVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
VAYVR + ++ S WY A+D ++E+SLEEVL+CEAY+LFYE++
Sbjct: 768 CVAYVRANNQ-----QQGSGSSSWYCATDDDIKEISLEEVLKCEAYLLFYERM 815
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 138/330 (41%), Gaps = 35/330 (10%)
Query: 107 IWVCLGCG-HYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEK 165
+ VC+ C H+ G + P+ H+ HA HP+ + +E+P+ +CF C + +
Sbjct: 107 MMVCVECDMHFCIGRFSKKSKPRGHIEEHAFDDGHPVALWYEDPYTGYCFECEDPLTI-- 164
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
GE D K +K + E D+ G V+ S
Sbjct: 165 ---GGEEGD------KGMKVKGEEGCRASGSDSGHG------------CVIGASGSGSGH 203
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGL 285
V+RG++N GNTC N++++ LL + +L+ G L L+ LF +
Sbjct: 204 GCVIRGISNQGNTCL-NALLRCLLVLGKLRARMFGPNAPLGILGTILRGLFVDANSVRHA 262
Query: 286 RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISS 345
+N C+ G HDSHELL CL + L E+ R P++ G S
Sbjct: 263 PGPLNRALLLACVRRFDSWLIGTSIHDSHELLCCLRNRLNEEDKIIRP---PNKQQGSPS 319
Query: 346 NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS-------KKTQP 398
+ P +D FGG+++ T C C S + F DLS+P+P K APS + +P
Sbjct: 320 SVAPTVIDSTFGGELSVTTSCKRCSFKSYSRDVFYDLSVPLPPKGAPSNSVASPPQNERP 379
Query: 399 ASRAKKTKLPPKKSGRIRAKGTKDTHAVTT 428
S+ K L +I +DT V T
Sbjct: 380 ISQCKICVLSEGGDSQIPPSELEDTVMVKT 409
>gi|125562280|gb|EAZ07728.1| hypothetical protein OsI_29983 [Oryza sativa Indica Group]
Length = 838
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 160/384 (41%), Gaps = 63/384 (16%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
I+VCLGC C H HA T+H + + + NP++ CF C
Sbjct: 221 IFVCLGCEKPFC---------TVHSSLHAESTKHLVGLVYHNPYVACCFLC--------- 262
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
SE LI G G+ + + + + G+A
Sbjct: 263 ----------SETFVLI-----------------GEGDKRMPVDKAAGGYASESVIGHA- 294
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
+ ++G+ NLGNTC+ NS+MQ LL + +L+ L + G L AL LF +T
Sbjct: 295 HAIKGIPNLGNTCYLNSLMQCLLVLGKLRARMLGPDAPSGTLGTALHDLFEQTYSVNNAT 354
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++ C+C+ PQF G HD+HELL CL L EE R R P+ + +
Sbjct: 355 GLLETSLLLDCVCNLDPQFVGGFMHDNHELLCCLRKNLDEEE---RMRTPPNMQDSSAGA 411
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
P + +FGGQ+ T C C S + F DLS+PVP KK P+K + + +
Sbjct: 412 VPPTVFNSIFGGQLFVTRSCKCCSFCSVSHAVFYDLSVPVPPKKPPAKSVESTPWIEGHR 471
Query: 407 LPPK----KSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQ 462
PK + I + T+ TH + + S+ + K + +++ PL + SQ
Sbjct: 472 SQPKICINQFEAIHKRNTEKTHRIVEDADSDPASELKDMVMVKTSEPLEVDYTEVEQISQ 531
Query: 463 LLDSVGSPTVATQCGSALQNVPAD 486
D V P QNV AD
Sbjct: 532 SKDYVQDP----------QNVLAD 545
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 27/186 (14%)
Query: 858 ITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKR 917
++ QD+ + ++D G +K++ S Q+ C++E+ K + +
Sbjct: 677 LSSQDQNATTLD----EGRGKQKLHHSAHQV--EECQNEQ-----------KDRNKGATQ 719
Query: 918 VLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVG 977
I+K P +LTIHL R K+ GHV+F EI+++ +MDP D DN YRL G
Sbjct: 720 TRISKLPLVLTIHLMRSLLGP----DKVMGHVSFKEILDMGLFMDPSSEDKDNSIYRLAG 775
Query: 978 VVEHLGTMR-GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
V+EH G + GH+VAYVR P+ + W+ ASD +REVSLEEVL+CEAY+
Sbjct: 776 VIEHHGRGKDSGHFVAYVRPSPRQQTNGSSS-----WFCASDTDIREVSLEEVLKCEAYL 830
Query: 1037 LFYEKI 1042
LFYE++
Sbjct: 831 LFYERM 836
>gi|115477411|ref|NP_001062301.1| Os08g0527100 [Oryza sativa Japonica Group]
gi|113624270|dbj|BAF24215.1| Os08g0527100 [Oryza sativa Japonica Group]
gi|125604088|gb|EAZ43413.1| hypothetical protein OsJ_28018 [Oryza sativa Japonica Group]
gi|215767414|dbj|BAG99642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 959
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 81/127 (63%), Gaps = 15/127 (11%)
Query: 919 LINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGV 978
+INK PP+L IHLKR + K+ GHVNF EI+++ +MDP D DN Y LVGV
Sbjct: 843 VINKLPPVLAIHLKRSKETG-----KVRGHVNFEEILDVGQFMDPSSEDKDNSSYHLVGV 897
Query: 979 VEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGV--WYHASDVYVREVSLEEVLRCEAY 1035
+EH+G + GH VAYVR +++ GG WY ASD +R+VSLEEVL+CEA
Sbjct: 898 IEHIGPSTSSGHMVAYVRPN-------QEQPDGGTSPWYRASDTDIRQVSLEEVLKCEAS 950
Query: 1036 ILFYEKI 1042
+ FYE+I
Sbjct: 951 LFFYERI 957
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 126/290 (43%), Gaps = 51/290 (17%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQW-ENPHLRWCFPCN-TLIPVE 164
I VC GC + C P H HAR+ H V W +P+ +CF C L
Sbjct: 252 IMVCTGCNKHFCTRAEAKKKPHGHARLHARKFEHHWVGLWYSDPYKGYCFKCEFDLTLSA 311
Query: 165 KTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGN 224
T E G ++ G+ FG ES +V G +
Sbjct: 312 PTVEQG-----------MVFGKE-----------LFGQ---------ESGLVKG-----H 335
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETG 284
C V+RG+ NLGNTC+ N+++Q L + +L+ L + L LK+LF E
Sbjct: 336 GC-VIRGMPNLGNTCYINALLQCLFVLGKLRARMLAPDAPSYILGYELKELFQEVNNVDN 394
Query: 285 LRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGIS 344
+ +NP FF CI +F DSHELL LL+ L EE + SP+
Sbjct: 395 AQLQLNPTKFFACIRVLDARFISSDMQDSHELLCFLLNELDKEEKSMVPPVSPT------ 448
Query: 345 SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK 394
VD +F Q+++T+ C C ++S +E +LS+P+P+++ P K
Sbjct: 449 ------VVDSIFRVQLSATISCSHCSYNSVSHEVMYELSVPLPSERPPPK 492
>gi|125562276|gb|EAZ07724.1| hypothetical protein OsI_29979 [Oryza sativa Indica Group]
Length = 959
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 81/127 (63%), Gaps = 15/127 (11%)
Query: 919 LINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGV 978
+INK PP+L IHLKR + K+ GHVNF EI+++ +MDP D DN Y LVGV
Sbjct: 843 VINKLPPVLAIHLKRSKETG-----KVRGHVNFEEILDVGQFMDPSSEDKDNSSYHLVGV 897
Query: 979 VEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGV--WYHASDVYVREVSLEEVLRCEAY 1035
+EH+G + GH VAYVR +++ GG WY ASD +R+VSLEEVL+CEA
Sbjct: 898 IEHIGPSTSSGHMVAYVRPN-------QEQPDGGTSPWYRASDTDIRQVSLEEVLKCEAS 950
Query: 1036 ILFYEKI 1042
+ FYE+I
Sbjct: 951 LFFYERI 957
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 126/290 (43%), Gaps = 51/290 (17%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQW-ENPHLRWCFPCN-TLIPVE 164
I VC GC + C P H HAR+ H V W +P+ +CF C L
Sbjct: 252 IMVCTGCNKHFCTRAEAKKKPHGHARLHARKFEHHWVGLWYSDPYKGYCFKCEFDLTLSA 311
Query: 165 KTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGN 224
T E G ++ G+ FG ES +V G +
Sbjct: 312 PTVEQG-----------MVFGKE-----------LFGQ---------ESGLVKG-----H 335
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETG 284
C V+RG+ NLGNTC+ N+++Q L + +L+ L + L LK+LF E
Sbjct: 336 GC-VIRGMPNLGNTCYINALLQCLFVLGKLRARMLAPDAPSYILGYELKELFQEVNNVDN 394
Query: 285 LRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGIS 344
+ +NP FF CI +F DSHELL LL+ L EE + SP+
Sbjct: 395 AQLQLNPTKFFACIRVLDARFISSDMQDSHELLCFLLNELDKEEKSMVPPVSPT------ 448
Query: 345 SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK 394
VD +F Q+++T+ C C ++S +E +LS+P+P+++ P K
Sbjct: 449 ------VVDSIFRVQLSATISCSHCSYNSVSHEVMYELSVPLPSERPPPK 492
Score = 39.7 bits (91), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%)
Query: 102 VDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLI 161
V+ +I VC+ C C G G PQ H HA +H + + P +CF C +
Sbjct: 139 VEKSSILVCIDCSLPFCIGDGTMDKPQGHARWHADLEQHCVAALFSKPDTLYCFICERCL 198
Query: 162 PVE 164
+E
Sbjct: 199 NME 201
>gi|42407640|dbj|BAD08754.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 914
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 166/353 (47%), Gaps = 42/353 (11%)
Query: 698 DEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLI 757
DE +D +S VS+E CL I+ E++ W CE+CSK Q+
Sbjct: 594 DEAEDINSLVSIEECLKLHIESEMIE----WTCENCSKVAQK------------------ 631
Query: 758 NGGETSNQNDIQGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGK--TDCFNQDCAEVE 815
S ++ Q + T+V+ GD +D T L S + +C +
Sbjct: 632 -ASTISGKDGEQMMASTNVNRTVYGDQAEQSDRKTCQRELSSDLIRLSVECSSSSSQPHG 690
Query: 816 SGLTNDVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESI--TDQDEGSCSVDGATS 873
SG+ N PAV + G+ +VE S SSC + E + +D SC + +
Sbjct: 691 SGVQNHDMPAVDIKTCGETSGMSSVEKDS-SSCSIANKKPECLGGAQEDASSCRLTEKQA 749
Query: 874 SGYSAEKVYQSDSQLVAGN---CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIH 930
+ S + S GN ++EE A LI+K PP+L I
Sbjct: 750 NLLSVQCQNISIEDQERGNQVNLGHNAHQLEENQYDQQDRNEGAILTCLISKLPPVLVIQ 809
Query: 931 LKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLG-TMRGGH 989
L R + G L K++GHV+F EI+++ P+MDP D + YRLVGV+E+ G ++ G
Sbjct: 810 LNR----SLGPL-KVSGHVSFKEILDVEPFMDPSSEDKFSSRYRLVGVIENRGLSIHIGQ 864
Query: 990 YVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
VAYVR + ++ S WY A+D ++E+SLEEVL+CEAY+LFYE++
Sbjct: 865 CVAYVRANNQ-----QQGSGSSSWYCATDDDIKEISLEEVLKCEAYLLFYERM 912
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 137/329 (41%), Gaps = 47/329 (14%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
+ VC C Y C PQ H+ HA H + + + ++ +CF C + +
Sbjct: 218 MMVCSECKGYFCIEPATKAKPQGHIREHALLQEHWVAVWHNDLYVGYCFECEDSLVIGGE 277
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
E K+ L+ VN+E S + SGS DG+ C
Sbjct: 278 E----GKEGLA---------------------------VNAEAGSHA---SGSS-DGHGC 302
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
V+RG++N GNTC N++++ LL + +L+ G L L+ LF +
Sbjct: 303 -VIRGISNQGNTCL-NALLRCLLVLGKLRARMFGPNAPLGILGTILRGLFVDANSVRHAP 360
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
+N C+ G HDSHELL CL + L E+ R P++ G S+
Sbjct: 361 GPLNRALLLACVRRFDSWLIGTSIHDSHELLCCLRNRLNEEDKIIRP---PNKQQGAPSS 417
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS-------KKTQPA 399
P +D +FG +++ T C C S + F DLS+P+P K APS + +P
Sbjct: 418 VAPTVIDSIFGSELSVTTSCKRCSFKSYSCDVFYDLSVPLPPKGAPSNSVASPPQNERPI 477
Query: 400 SRAKKTKLPPKKSGRIRAKGTKDTHAVTT 428
S+ K L +I A +DT V T
Sbjct: 478 SQCKICVLSEGGDSQIPASELEDTVMVKT 506
>gi|222640904|gb|EEE69036.1| hypothetical protein OsJ_28020 [Oryza sativa Japonica Group]
Length = 921
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 166/353 (47%), Gaps = 42/353 (11%)
Query: 698 DEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLI 757
DE +D +S VS+E CL I+ E++ W CE+CSK Q+
Sbjct: 601 DEAEDINSLVSIEECLKLHIESEMIE----WTCENCSKVAQK------------------ 638
Query: 758 NGGETSNQNDIQGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGK--TDCFNQDCAEVE 815
S ++ Q + T+V+ GD +D T L S + +C +
Sbjct: 639 -ASTISGKDGEQMMASTNVNRTVYGDQAEQSDRKTCQRELSSDLIRLSVECSSSSSQPHG 697
Query: 816 SGLTNDVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESI--TDQDEGSCSVDGATS 873
SG+ N PAV + G+ +VE S SSC + E + +D SC + +
Sbjct: 698 SGVQNHDMPAVDIKTCGETSGMSSVEKDS-SSCSIANKKPECLGGAQEDASSCRLTEKQA 756
Query: 874 SGYSAEKVYQSDSQLVAGN---CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIH 930
+ S + S GN ++EE A LI+K PP+L I
Sbjct: 757 NLLSVQCQNISIEDQERGNQVNLGHNAHQLEENQYDQQDRNEGAILTCLISKLPPVLVIQ 816
Query: 931 LKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLG-TMRGGH 989
L R + G L K++GHV+F EI+++ P+MDP D + YRLVGV+E+ G ++ G
Sbjct: 817 LNR----SLGPL-KVSGHVSFKEILDVEPFMDPSSEDKFSSRYRLVGVIENRGLSIHIGQ 871
Query: 990 YVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
VAYVR + ++ S WY A+D ++E+SLEEVL+CEAY+LFYE++
Sbjct: 872 CVAYVRANNQ-----QQGSGSSSWYCATDDDIKEISLEEVLKCEAYLLFYERM 919
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 137/329 (41%), Gaps = 47/329 (14%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
+ VC C Y C PQ H+ HA H + + + ++ +CF C + +
Sbjct: 225 MMVCSECKGYFCIEPATKAKPQGHIREHALLQEHWVAVWHNDLYVGYCFECEDSLVIGGE 284
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
E K+ L+ VN+E S + SGS DG+ C
Sbjct: 285 E----GKEGLA---------------------------VNAEAGSHA---SGSS-DGHGC 309
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
V+RG++N GNTC N++++ LL + +L+ G L L+ LF +
Sbjct: 310 -VIRGISNQGNTCL-NALLRCLLVLGKLRARMFGPNAPLGILGTILRGLFVDANSVRHAP 367
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
+N C+ G HDSHELL CL + L E+ R P++ G S+
Sbjct: 368 GPLNRALLLACVRRFDSWLIGTSIHDSHELLCCLRNRLNEEDKIIRP---PNKQQGAPSS 424
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS-------KKTQPA 399
P +D +FG +++ T C C S + F DLS+P+P K APS + +P
Sbjct: 425 VAPTVIDSIFGSELSVTTSCKRCSFKSYSCDVFYDLSVPLPPKGAPSNSVASPPQNERPI 484
Query: 400 SRAKKTKLPPKKSGRIRAKGTKDTHAVTT 428
S+ K L +I A +DT V T
Sbjct: 485 SQCKICVLSEGGDSQIPASELEDTVMVKT 513
>gi|42407638|dbj|BAD08752.1| ubiquitin-specific protease-like [Oryza sativa Japonica Group]
Length = 846
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 81/127 (63%), Gaps = 15/127 (11%)
Query: 919 LINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGV 978
+INK PP+L IHLKR + K+ GHVNF EI+++ +MDP D DN Y LVGV
Sbjct: 730 VINKLPPVLAIHLKRSKETG-----KVRGHVNFEEILDVGQFMDPSSEDKDNSSYHLVGV 784
Query: 979 VEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGV--WYHASDVYVREVSLEEVLRCEAY 1035
+EH+G + GH VAYVR +++ GG WY ASD +R+VSLEEVL+CEA
Sbjct: 785 IEHIGPSTSSGHMVAYVRPN-------QEQPDGGTSPWYRASDTDIRQVSLEEVLKCEAS 837
Query: 1036 ILFYEKI 1042
+ FYE+I
Sbjct: 838 LFFYERI 844
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 126/290 (43%), Gaps = 51/290 (17%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQW-ENPHLRWCFPCNT-LIPVE 164
I VC GC + C P H HAR+ H V W +P+ +CF C L
Sbjct: 139 IMVCTGCNKHFCTRAEAKKKPHGHARLHARKFEHHWVGLWYSDPYKGYCFKCEFDLTLSA 198
Query: 165 KTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGN 224
T E G ++ G+ FG ES +V G +
Sbjct: 199 PTVEQG-----------MVFGKE-----------LFGQ---------ESGLVKG-----H 222
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETG 284
C V+RG+ NLGNTC+ N+++Q L + +L+ L + L LK+LF E
Sbjct: 223 GC-VIRGMPNLGNTCYINALLQCLFVLGKLRARMLAPDAPSYILGYELKELFQEVNNVDN 281
Query: 285 LRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGIS 344
+ +NP FF CI +F DSHELL LL+ L EE + SP+
Sbjct: 282 AQLQLNPTKFFACIRVLDARFISSDMQDSHELLCFLLNELDKEEKSMVPPVSPT------ 335
Query: 345 SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK 394
VD +F Q+++T+ C C ++S +E +LS+P+P+++ P K
Sbjct: 336 ------VVDSIFRVQLSATISCSHCSYNSVSHEVMYELSVPLPSERPPPK 379
>gi|281347643|gb|EFB23227.1| hypothetical protein PANDA_020023 [Ailuropoda melanoleuca]
Length = 815
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 164/380 (43%), Gaps = 77/380 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + + + C +C + +RR G+ V IW+
Sbjct: 38 CQHVSHAISVNHVKKAVAENAWSVCSEC---LKERRFCDGRP----------VLPSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + R H + I + WC+ C+ + +
Sbjct: 85 CLKCGFQGCGR----NSESHHSLKHYKSWRTESHCITISLST-WVIWCYECDEKLSTQC- 138
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
NK L++ V ++ ++ + + F E K E T G++
Sbjct: 139 -----NKKVLAQTVDFLQKHVSK-----AQTSTFSRILKLCEEKCE-TGEKRKGRKGSSV 187
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAELT 264
V+G++NLGNTCFFN+VMQNL L + L EL+
Sbjct: 188 PSVKGISNLGNTCFFNAVMQNLAQSYVLMELMNENKENGTKLKIFPSPDSQLDPLIVELS 247
Query: 265 F-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
GPLT AL +F + ET + ++P+ F +C KAP+FK +QQ DS ELL LLD
Sbjct: 248 SPGPLTSALL-VFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKSFQQQDSQELLHYLLDA 305
Query: 324 LCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRC 366
+ +EE + N+P+ + V F+D +F G++ STV C
Sbjct: 306 VRTEETKRIQASILKAYNNPTTKTADDDTRKKVKAYGREGVKMNFIDRIFIGELTSTVMC 365
Query: 367 VECGHSSTVYEPFLDLSLPV 386
EC + V +PF+D+SLP+
Sbjct: 366 EECAN--VVNDPFIDISLPI 383
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEE----INSKIVK 909
SQ IT E CS+ +++ ++ +++L+ NC ++ + ++ K
Sbjct: 609 SQSYITTSKE--CSLQSCLYQ-FTSMELLMGNNKLLCENCTEKKQRSQKETGSAEKKAEG 665
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 666 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNVS 724
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK--------------VKAKKESVGGV 1012
D Y L GVVEH G+MRGGHY AYV+ P ++ VK G
Sbjct: 725 VGDKVLYGLYGVVEHSGSMRGGHYTAYVKVRPPSRKLLEYITGKTYVPDVKEPDSESAGQ 784
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD V+ V L +AY+LFYE+I
Sbjct: 785 WVHVSDTCVQVVPESRALSAQAYLLFYERI 814
>gi|47207575|emb|CAG06354.1| unnamed protein product [Tetraodon nigroviridis]
Length = 676
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 107/217 (49%), Gaps = 41/217 (18%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQD---------YFLN----AELTFGPLTIALKK- 274
V+G+ NLGNTCFFN+VMQNL L D Y L E PLT+ L
Sbjct: 33 VKGINNLGNTCFFNAVMQNLFQTHMLIDLIQEVKEKGYKLRICPPVEANLSPLTVTLPSP 92
Query: 275 --------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCS 326
LF E G + ++P+ F +C KAP+FKGYQQ DS ELL L+D +
Sbjct: 93 EPLTAAMFLFLMNMKEPG-KGPLSPKLLFNQLCQKAPRFKGYQQQDSQELLHYLMDSIRV 151
Query: 327 EELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRCVEC 369
EE + N+P+E + V FVD +F G++ +T+ C EC
Sbjct: 152 EETKRVKAGILKAFNNPTEKTADEDTKRQVKAYGKEGVRMNFVDRIFVGELTNTIMCEEC 211
Query: 370 GHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
GH STV E F+D+SLP+ ++ SK + P K ++
Sbjct: 212 GHISTVKEAFIDISLPIIEERI-SKPSNPGRVGKGSR 247
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 49/225 (21%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNC-ESEESKVEEINS---KIVKVKRDATKRVLIN 921
CS+ S E + +++L+ NC E + + S K+ K+ A K++LI+
Sbjct: 452 CSIQSCLHQFTSVE-LLMGNNKLLCENCTERRHKHLRKSGSAEKKVEKMYTSARKQMLIS 510
Query: 922 KAPPILTIHLKRFSQ------------------------------DARGRLSKLNGHVNF 951
PP++ +HLKRF Q A L K+N HV+F
Sbjct: 511 SLPPVIILHLKRFHQVRDALFSSLLTPNLVFVCVFGEPVSHRCPFKAGMNLRKVNRHVDF 570
Query: 952 SEIINLRPYMDPGCTD---HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK------- 1001
++++ P+ C + + Y L G+VEH G+MRGGHY AYV+ P +
Sbjct: 571 PLVLDMAPFCSAACENLAAGERVLYSLYGIVEHSGSMRGGHYAAYVKVRPPQRRTEQHHR 630
Query: 1002 -VKAKKESVG---GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+ K+ G G W + SD V+ V VL +AY+LFYE+I
Sbjct: 631 NLSGAKDGGGVSQGQWVYVSDTAVQMVPESRVLNSQAYLLFYEEI 675
>gi|242082037|ref|XP_002445787.1| hypothetical protein SORBIDRAFT_07g025785 [Sorghum bicolor]
gi|241942137|gb|EES15282.1| hypothetical protein SORBIDRAFT_07g025785 [Sorghum bicolor]
Length = 844
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 142/315 (45%), Gaps = 43/315 (13%)
Query: 103 DSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIP 162
+ + + +C+ C + C GVG P H HA + +H + + +P +CF CN +P
Sbjct: 180 EKRDLLICVTCYDHLCCGVGSIAYPFGHSRAHALKKKHWFAVLYCDPERGYCFKCNAEVP 239
Query: 163 VEKTEENGENKDALSEVVKLIKGRSTEI----SSVDVEDAWFGSGNV--NSEIKSES--T 214
G+NK E+ ++ S E+ +SV A V ++++ES +
Sbjct: 240 KPVKFGAGDNKVGHQEIRDIV---SPELLAPPASVGQTKAEVNPKKVKMTGKVQAESCPS 296
Query: 215 VVS-------------GSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA 261
VV SD G Y +RG+ N GNTC+ ++V+Q L + +L++ L
Sbjct: 297 VVGVDHANKLPRYESRSSDAQG---YAIRGIPNRGNTCYMSAVLQCLFVLGKLRERMLAL 353
Query: 262 ELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSK-APQFKGYQQHDSHELLRCL 320
+ L LKKLF E + +++NP C+ APQF DSH+LL
Sbjct: 354 DRPKSRLAKVLKKLFLEA---SAAGDLLNPNEVLECVRKDCAPQFGVGAMEDSHDLL--- 407
Query: 321 LDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGH-SSTVYEPF 379
A R+ + E N N P +D +FG +A T+ C +CGH S V PF
Sbjct: 408 --------TALRELWNQGEENDSWQNDAPTVMDSIFGFVMARTLSCKKCGHLSPPVPYPF 459
Query: 380 LDLSLPVPTKKAPSK 394
DLSL P+ P+K
Sbjct: 460 QDLSLGFPSNGHPTK 474
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 9/123 (7%)
Query: 924 PPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLG 983
PP+LT+HLKR D G SK++GHV F E +++ +MDP D + YRL GVVEH+G
Sbjct: 692 PPVLTLHLKRSRHDTVG--SKISGHVRFMEYLDVEQFMDPSFVDEGSTCYRLAGVVEHIG 749
Query: 984 --TMRGGHYVAYVRGGPKNKVKAKKE--SVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
T+R GHY+AYVR ++ ++E S W+ A+D + +V+LE+VL EAYILFY
Sbjct: 750 KDTLRSGHYIAYVRA---RRLGNQQEGSSCSSSWFRANDHCIGQVTLEQVLNSEAYILFY 806
Query: 1040 EKI 1042
E++
Sbjct: 807 ERV 809
>gi|215717055|dbj|BAG95418.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 431
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 126/299 (42%), Gaps = 49/299 (16%)
Query: 104 SKAIWVCLGCGHYAC-GGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIP 162
S + VC CG C GG+ P H+ HA + H + ++ E+P +CF C
Sbjct: 117 SNLMMVCPECGWCFCVGGLAHRAKPLGHIREHAYRRAHWVALRCEDPCEGYCFEC----- 171
Query: 163 VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLD 222
+D+L+ I+ + + +G
Sbjct: 172 ----------EDSLA-----IESQMVADDGAGGGEEGYGC-------------------- 196
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPE 282
VV G+ NLGNTC+ N+++Q LL + +L+ L G L L LF T
Sbjct: 197 -----VVTGMPNLGNTCYLNALLQCLLVLGKLRARILGPGAPSGVLGDLLHDLFVGTNGP 251
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+ R +++P C+ + PQF+G D HELL CL DGL +E RK + G
Sbjct: 252 SYARRLLDPAMLLRCVRFRYPQFRGIAMQDCHELLCCLRDGLDEDE---RKWRAGKMQQG 308
Query: 343 ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASR 401
S P +D +F GQ++ T+ C C S E F DLS+P+P K P++ R
Sbjct: 309 APSAVAPTVIDSIFAGQLSVTLSCKCCSFKSDSEEVFHDLSMPLPPKGTPARSVASPPR 367
>gi|11640586|gb|AAG39290.1|AF113219_1 MSTP039 [Homo sapiens]
Length = 644
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 103/197 (52%), Gaps = 41/197 (20%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 16 VKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPP 75
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR LLDG+
Sbjct: 76 GPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGMR 133
Query: 326 SEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIASTVRCVEC 369
+EE + NS + + N+ P FVD +FGG++ S + C +C
Sbjct: 134 AEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSMIMCDQC 193
Query: 370 GHSSTVYEPFLDLSLPV 386
S V+E FLDLSLPV
Sbjct: 194 RTVSLVHESFLDLSLPV 210
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 497 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 555
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 556 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 615
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 616 HISDTHVQAVPTTKVLNSQAYLLFYERI 643
>gi|410904945|ref|XP_003965952.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like [Takifugu
rubripes]
Length = 780
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 167/403 (41%), Gaps = 86/403 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVD-----S 104
C H+ K +D + + SS + C DC K +++D S
Sbjct: 25 CQHVGKAVDLTSVKKSVLSSVWLVCSDCL------------------KERTMIDTDISTS 66
Query: 105 KAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHP----LVIQ---WENPHLRWCFPC 157
I VCL CG C G+ H V+H Q HP + I W+ WCF C
Sbjct: 67 HDIVVCLKCGFQGCNQSGI-----QHAVKH-HQAFHPESHCITISLSTWKA----WCFEC 116
Query: 158 NTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVS 217
N + NK AL++ + ++ S + +S +V+ ++ +
Sbjct: 117 NEELSTHC------NKKALAQSLDFLQKHSVKAASEQGMQEVLVYMHVDDPQHYDAFLCP 170
Query: 218 GSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTFGPLTIALK 273
G L R L+ G ++ +L+ + + Y L E PLT+ L
Sbjct: 171 GEKLYSVTAAHTRWLSKEGQNLSQTHMLIDLIQEVKEKGYKLRICPPVETNLSPLTVTLP 230
Query: 274 K---------LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL 324
LF E G ++ +NP+ F +C KAP+FKGYQQ DS ELL L+D +
Sbjct: 231 SPEPLTAAMFLFLLNMKEPG-KDPLNPKLLFNQLCQKAPRFKGYQQQDSQELLHYLMDSI 289
Query: 325 CSEELA------FRKRNSPSEGN---------------GISSNQGPVFVDYVFGGQIAST 363
EE + N+P+E G+ N F++ +F G++ +T
Sbjct: 290 RVEETKRVKVGILKAFNNPTEKTADEDIKRQVKAYGKEGVRMN----FIERIFVGELTNT 345
Query: 364 VRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
+ C ECGH STV E F+D+SLP+ ++ SK + P+ K ++
Sbjct: 346 IMCEECGHISTVKEAFIDISLPIIEERI-SKPSNPSRLGKGSR 387
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 20/195 (10%)
Query: 866 CSVDGATSSGYSAEKVYQSDSQLVAGNC----ESEESKVEEINSKIVKVKRDATKRVLIN 921
CS+ S E + +++L+ NC + K + K K+ A K++LI+
Sbjct: 587 CSIQSCLHQFTSVE-LLMGNNKLLCENCTERRQKHLHKSASADKKGEKMYTSARKQMLIS 645
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD---HDNYDYRLVGV 978
PP++ +HLKRF Q A K+N HV+F I+++ P+ C + + Y L G+
Sbjct: 646 SLPPVIILHLKRFHQ-AGMNFRKVNRHVDFPLILDMAPFCSALCKNLAAGERVLYSLYGI 704
Query: 979 VEHLGTMRGGHYVAYVR-GGPKNKVKAKKESVGGV----------WYHASDVYVREVSLE 1027
VEH G+MR GHY AYV+ P+ K + +++ G W + SD V+ V
Sbjct: 705 VEHSGSMRVGHYTAYVKVRPPQRKTEQHHKNLSGAKDGGSVSQGQWVYISDTTVQMVPES 764
Query: 1028 EVLRCEAYILFYEKI 1042
VL +AY+LFYE++
Sbjct: 765 RVLNSQAYLLFYEEL 779
>gi|193785740|dbj|BAG51175.1| unnamed protein product [Homo sapiens]
Length = 644
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 102/198 (51%), Gaps = 43/198 (21%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 16 VKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPP 75
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQ+ DS ELLR LLDG+
Sbjct: 76 GPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQRQDSQELLRYLLDGMR 133
Query: 326 SEELAFRKRNSPSEGNGISSNQ-----------------GPVFVDYVFGGQIASTVRCVE 368
+EE R + G S+ + P FVD +FGG++ S + C +
Sbjct: 134 AEEHQ-RVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSMIMCDQ 192
Query: 369 CGHSSTVYEPFLDLSLPV 386
C S V+E FLDLSLPV
Sbjct: 193 CRTVSLVHESFLDLSLPV 210
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 497 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 555
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 556 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 615
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 616 HISDTHVQAVPTTKVLNSQAYLLFYERI 643
>gi|115477417|ref|NP_001062304.1| Os08g0527400 [Oryza sativa Japonica Group]
gi|113624273|dbj|BAF24218.1| Os08g0527400 [Oryza sativa Japonica Group]
Length = 762
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 145/352 (41%), Gaps = 32/352 (9%)
Query: 107 IWVCLGCG-HYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEK 165
+ VC+ C H+ G + P+ H+ HA HP+ + +E+P+ +CF C + +
Sbjct: 124 MMVCVECDMHFCIGRFAKKSKPRGHIEEHAFDDGHPVALWYEDPYTGYCFECEDPLTI-- 181
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
GE D K +K + E D+ G V+ S
Sbjct: 182 ---GGEEGD------KGMKVKGEEGCRASGSDSGHG------------CVIGASGSGSGH 220
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL--NAELTFGPLTIALKKLFAETKPET 283
+RG+ N GNTC+ N+V+Q LL + +L+ +A G L I L LF T+ +
Sbjct: 221 GCAIRGIPNFGNTCYLNAVLQCLLVLGKLRARMSGPDAPPPSGMLGIILHDLFVATESVS 280
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGI 343
R++++P GC+ +F+G DSHELL CL D L EE R N +
Sbjct: 281 YTRDLLDPVMLLGCVRHYKSEFQGNTMQDSHELLCCLRDSLIEEESKTRPDNMQQDA--- 337
Query: 344 SSNQGPVFVDYVFGGQIASTVRCVECGHSST---VYEPFLDLSLPVPTKKAPSKKTQPAS 400
S P +D +F GQ+ T C C S + F DL + +P + Q +
Sbjct: 338 PSAVVPTVIDSIFRGQLFVTTLCKYCSFESVSQGSQDAFYDLCVALPLQNERCISQQKIA 397
Query: 401 RAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSE 452
+ + + +I A V + ++ + S+ L + PL +
Sbjct: 398 IEQFPTIDKTNTEKIHAISGGSDPQVPASELGDMVMVKTSEPLVVDSNPLDQ 449
>gi|125562285|gb|EAZ07733.1| hypothetical protein OsI_29988 [Oryza sativa Indica Group]
Length = 787
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 174/417 (41%), Gaps = 77/417 (18%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
I VCLGC + C G H HA+ T+H + +++P++ CF C ++
Sbjct: 224 ILVCLGCENPFCSG---------HADVHAKSTKHWNYLIYQSPYIVCCFVCKGIV----- 269
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ G+ E VD A SG+V
Sbjct: 270 ---------------FLGGQDKEEMPVDNATAGDASGSVIEH-----------------A 297
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
+ +RG+ NLGNTC+ NS++Q LLA+ +L+ L E T G L L+ LF +T
Sbjct: 298 HAIRGITNLGNTCYLNSLVQCLLALGRLRARMLRPEDTTGRLGTVLRYLFQDTDSVNNSG 357
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++NP + P+ + HDSHE L L L EE + G S
Sbjct: 358 GLLNPSGLLRRVRMFVPESQVTSMHDSHEALCRLRTNLDEEERLMK--------YGALSV 409
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYE-PFLDLSLPVPTKKAPSKKTQP--ASRAK 403
+ P +D +FGGQ++ T C C SS + F DLS+P+ KK +K+ +P ++ +
Sbjct: 410 EAPTVIDSIFGGQLSVTKTCKCCSLSSVSHGIVFHDLSMPITPKKPLAKRVEPLWITKGR 469
Query: 404 KTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQL 463
+++ R + T+ TH + S + +++ PL + SQ
Sbjct: 470 RSQ---------RKRNTEKTHTIAEDGDSQ-------NVMVKTSEPLGVDSTKVEQISQS 513
Query: 464 LDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWL-DYIEPQTT 519
D+V P + +Q D LPQ + + D VE A+ D + +Y+ P T
Sbjct: 514 KDAVQGPLQIQK--DKVQGKAVDFLPQ-NVLSDAKVEGMDATRADSHIPEYLAPAPT 567
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 18/159 (11%)
Query: 885 DSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSK 944
+++ V CE+ +++N +++ + ++ PP+L IHLKR + K
Sbjct: 644 EAETVELTCENCSKFAQKLNKSVIQTR--------LSLLPPVLVIHLKRSLLQS----DK 691
Query: 945 LNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMR-GGHYVAYVRGGPKNKVK 1003
+ GHV+F EI+++ +MDP D DN YRL GV+EH G + GH+VAYVR + +
Sbjct: 692 VKGHVSFKEILDVGLFMDPSSVDKDNSIYRLAGVIEHHGHGKDSGHFVAYVR-----QSR 746
Query: 1004 AKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
++ + W+ ASD +REV LEEVL+CEAY+LFYE++
Sbjct: 747 PQQTNGSSSWFWASDTDIREVPLEEVLKCEAYLLFYERM 785
>gi|115477427|ref|NP_001062309.1| Os08g0528000 [Oryza sativa Japonica Group]
gi|113624278|dbj|BAF24223.1| Os08g0528000 [Oryza sativa Japonica Group]
gi|125604097|gb|EAZ43422.1| hypothetical protein OsJ_28027 [Oryza sativa Japonica Group]
Length = 787
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 174/417 (41%), Gaps = 77/417 (18%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
I VCLGC + C G H HA+ T+H + +++P++ CF C ++
Sbjct: 224 ILVCLGCENPFCSG---------HADVHAKSTKHWNYLIYQSPYIVCCFVCKGIV----- 269
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ G+ E VD A SG+V
Sbjct: 270 ---------------FLGGQDKEEMPVDNATAGDASGSVIEH-----------------A 297
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
+ +RG+ NLGNTC+ NS++Q LLA+ +L+ L E T G L L+ LF +T
Sbjct: 298 HAIRGITNLGNTCYLNSLVQCLLALGRLRARMLRPEDTTGRLGTVLRYLFQDTDSVNNSG 357
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++NP + P+ + HDSHE L L L EE + G S
Sbjct: 358 GLLNPSGLLRRVRMFVPESQVTSMHDSHEALCRLRTNLDEEERLMK--------YGALSV 409
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYE-PFLDLSLPVPTKKAPSKKTQP--ASRAK 403
+ P +D +FGGQ++ T C C SS + F DLS+P+ KK +K+ +P ++ +
Sbjct: 410 EAPTVIDSIFGGQLSVTKTCKCCSLSSVSHGIVFHDLSMPITPKKPLAKRVEPLWITKGR 469
Query: 404 KTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQL 463
+++ R + T+ TH + S + +++ PL + SQ
Sbjct: 470 RSQ---------RKRNTEKTHTIAEDGDSQ-------NVMVKTSEPLGVDSTKVEQISQS 513
Query: 464 LDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVASLDDFWL-DYIEPQTT 519
D+V P + +Q D LPQ + + D VE A+ D + +Y+ P T
Sbjct: 514 KDAVQGPLQIQK--DKVQGKAVDFLPQ-NVLSDAKVEGMDATRADSHIPEYLAPAPT 567
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 18/159 (11%)
Query: 885 DSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSK 944
+++ V CE+ +++N +++ + ++ PP+L IHLKR + K
Sbjct: 644 EAETVELTCENCSKFAQKLNKSVIQTR--------LSLLPPVLVIHLKRSLLQS----DK 691
Query: 945 LNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMR-GGHYVAYVRGGPKNKVK 1003
+ GHV+F EI+++ +MDP D DN YRL V+EH G + GH+VAYVR + +
Sbjct: 692 VKGHVSFKEILDVGLFMDPSSVDKDNSIYRLASVIEHHGHGKDSGHFVAYVR-----QSR 746
Query: 1004 AKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
++ + W+ ASD +REV LEEVL+CEAY+LFYE++
Sbjct: 747 PQQTNGSSSWFWASDTDIREVPLEEVLKCEAYLLFYERM 785
>gi|324500463|gb|ADY40219.1| Ubiquitin carboxyl-terminal hydrolase 16 [Ascaris suum]
Length = 620
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 97/212 (45%), Gaps = 46/212 (21%)
Query: 222 DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------- 258
D V+GL NLGNTCFFNS++Q LL L Y
Sbjct: 81 DEQGFVAVKGLVNLGNTCFFNSIVQCLLHTHSLSIYVNLVGKQEYVDIPSMKVVIADKTV 140
Query: 259 --LNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHEL 316
+ L P L + FA + + I+P S F I KAP+F+G+ Q D+HEL
Sbjct: 141 QVPHVRLDLEPFKGPLNEHFAYFLRDFRMGRAIHPSSLFSEIAKKAPRFRGWAQQDAHEL 200
Query: 317 LRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPV--------------------FVDYVF 356
LR LLDGL SEEL R + + S+ I N P +D VF
Sbjct: 201 LRYLLDGLRSEELN-RYKEAISDHLRIPRNVNPRSVEPDLVALAKGMLKGCGRPLLDAVF 259
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
GG + TV+C +CGH S +E LDLSLP+P+
Sbjct: 260 GGTLLQTVKCSKCGHLSRTFEEMLDLSLPLPS 291
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 83/165 (50%), Gaps = 36/165 (21%)
Query: 913 DATKRVLINKAPPILTIHLKRFSQ--DARGRLS--KLNGHVNFSEIINLRPYMDPGCTDH 968
+A+KR LI + P +LT+H KRF Q A GR+S K++GH+ F + +L P+
Sbjct: 456 EASKRYLIYEPPAVLTLHFKRFEQTHSASGRVSTRKVSGHIAFPAVFDLAPFCTRIAKRV 515
Query: 969 DNYD----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKK----------ESVG---- 1010
N Y L GVV H G + GGHYVAYVR P++ AKK E+ G
Sbjct: 516 TNGSREVVYSLYGVVSHSGDLSGGHYVAYVRSRPQSPC-AKKFFSQAAHSSLENCGLSNG 574
Query: 1011 -------------GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ASD V V VL EAYILFYE++
Sbjct: 575 TDDSKSTEISQTEGAWYYASDTRVSVVPESRVLAAEAYILFYERV 619
>gi|357630401|gb|EHJ78550.1| hypothetical protein KGM_10559 [Danaus plexippus]
Length = 886
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 197/525 (37%), Gaps = 108/525 (20%)
Query: 29 QQSKPVESTDDGVPVMKE--RKPCPHLDKGIDSDKI--SVKIGSSDPIRCEDCREGVGDR 84
+QS P E+ DD E + CPH+ K +D ++ ++K G + C +C+
Sbjct: 6 RQSDPSENGDDSTESCDETVKSACPHVAKAVDLTRLKKALKTGGFEK-ECSECK------ 58
Query: 85 RGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HP 141
K + S+ + +W+CL CG CG H + H H
Sbjct: 59 -----KSPKTEIADSNYEEDVTLWMCLRCGTQLCGRAR-----NKHALNHFHTPHSDCHA 108
Query: 142 LVIQ---WENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDA 198
L WE +C+ CN I + L E ++ +K +S+ +
Sbjct: 109 LTANTTTWE----IYCYNCNNEI-------TASSAKKLHECIEYLKKQSSNNPKLPPIAL 157
Query: 199 WFGSGNVNSEIKSESTVVSGSDLDGNACYV-----VRGLANLGNTCFFNSVMQNLLAMSQ 253
GS E+ +S +D + VRGL NLGNTCFFNSVMQ L+
Sbjct: 158 PLGSLESKLELPMPLEPISRNDKGKDKAMALNLPRVRGLTNLGNTCFFNSVMQCLVQTPY 217
Query: 254 LQDYFLN--------------------------AELTFGPLTI------ALKKLFAETKP 281
L + E+ P+T L K AET
Sbjct: 218 LLEVLQEMSSPGEKFTLPGGKLKIKGDQSGDEGVEMELPPITGQLAEWGTLTKTLAETLA 277
Query: 282 E--TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEE----------- 328
E G V NPR + +K PQF G QHD+HELLR LL+ + SE+
Sbjct: 278 ELQAGEGGVYNPRRLLSALVTKLPQFGGGDQHDAHELLRHLLEAVRSEDLRRYQSVILSS 337
Query: 329 LAFRKRNSPSEGNGISSNQGPVF----------VDYVFGGQIASTVRCVECGHSSTVYEP 378
L + P++ NG + + + VF G + ST+ C EC S E
Sbjct: 338 LGMNSKVDPAKVNGEVKQKVKFYGQQASDTMLRPEQVFRGFLVSTLECQECYSHSDRAEY 397
Query: 379 FLDLSLPVPT----------KKAPSKKTQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTT 428
FLDLSLPV +K + K +K KK + + +H T+
Sbjct: 398 FLDLSLPVAAFRPQPPAIVRRKTNEENNTNTQEEKPSKHQLKKERYANRRVARKSHKGTS 457
Query: 429 QSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVA 473
+ +S +ES A + +N+ + SVG+ VA
Sbjct: 458 KDKETNGPKEDEKSSSESDADVEDNLEDQPRQTDASTSVGTQAVA 502
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 123/260 (47%), Gaps = 35/260 (13%)
Query: 809 QDCAEV--ESGLTNDVNPAVPQREKG--KMKINDAVEMQSRSSCLRDSCSQESITDQDEG 864
Q C E+ S N + AV Q E K+KI + SS S + D+DE
Sbjct: 635 QGCRELFDNSWEVNTLEEAVFQEEIALDKLKIEPEAKPPPPSSPAASPSSPRYVCDEDE- 693
Query: 865 SCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK-VKRDATKRVLINKA 923
CSV S ++A ++ ++++ C E IN K + V +ATKR L++K
Sbjct: 694 -CSVQSCLSQ-FTALELLTGNNKVGCDTC------TERINGKGGRTVYTNATKRFLVSKP 745
Query: 924 PPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDP-GCTDHDNYDYRLVGVVEHL 982
P +L +HLKRF R K+ HV+F +++L P+ Y L GVVEH
Sbjct: 746 PAVLILHLKRFQLGPRCMFRKMTKHVDFPILLDLAPFCAADKSRRRGRLLYSLYGVVEHS 805
Query: 983 GTMRGGHYVAYV--RGGPK------NKVKAKKESVGGV------------WYHASDVYVR 1022
G M GGHYVAYV R P +V+ + G WY+ SD V
Sbjct: 806 GGMHGGHYVAYVKTRSSPAGRRFLPGRVRDDDSELSGYESGEAPPPPAARWYYVSDSMVS 865
Query: 1023 EVSLEEVLRCEAYILFYEKI 1042
EVS E+VLR +AY+LFYE++
Sbjct: 866 EVSEEKVLRAQAYLLFYERV 885
>gi|402581242|gb|EJW75190.1| hypothetical protein WUBG_13901 [Wuchereria bancrofti]
Length = 299
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 112/245 (45%), Gaps = 51/245 (20%)
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL------NAELTFGPLTIA--------- 271
+ ++GL NLGNTCFFNS+ Q LL L Y N EL + I
Sbjct: 3 FAMQGLGNLGNTCFFNSITQCLLHTHTLAVYIDLVGKEDNIELMQNKVLIGDRQVQVPHV 62
Query: 272 ----------LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L +FA + ++P S F I KAP+F+G+ Q D+HELLR L+
Sbjct: 63 YLSLASFDGPLNNIFANFIRDFKAGLPVHPSSLFSEIARKAPRFRGWAQQDAHELLRYLM 122
Query: 322 DGLCSEELAFRKRNSPSEGNGISSNQGPVF--------------------VDYVFGGQIA 361
DGL +EE+ R + + S ++ N P +D VFGG +
Sbjct: 123 DGLRTEEIN-RYKEAISRYIKVARNGNPKLTDGELSLLAKGMLKACGRPLIDAVFGGTLL 181
Query: 362 STVRCVECGHSSTVYEPFLDLSLPVPTKKAP-----SKKTQPASRAKKTKLPPKKSGRIR 416
TV+C CGH S YE FLDLSLP+P+ A + K ++ +K KK R+
Sbjct: 182 QTVKCSNCGHLSKTYEDFLDLSLPLPSTSAKTLFNGTDKMHKSASMSLSKYQKKKKKRMY 241
Query: 417 AKGTK 421
AKG K
Sbjct: 242 AKGLK 246
>gi|413941617|gb|AFW74266.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 523
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 89/128 (69%), Gaps = 11/128 (8%)
Query: 918 VLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVG 977
+ ++K PP+LTIH+ RF+ + K GHV F E I++ Y+DP TD D+ YRLVG
Sbjct: 402 LCLSKLPPVLTIHVLRFNIN-----DKRVGHVKFEENIDVGEYLDPRSTDKDDARYRLVG 456
Query: 978 VVEHLG-TMRGGHYVAYVRGGPKNKVKAKKE--SVGGVWYHASDVYVREVSLEEVLRCEA 1034
V+EHLG T+ GH+VAYVRG +++ ++KE S W+ A+D+ +R +SL++VL+ EA
Sbjct: 457 VIEHLGRTVTPGHFVAYVRG---SRIVSEKELSSSSSSWFQANDIRIRNISLDDVLKHEA 513
Query: 1035 YILFYEKI 1042
++LFYEKI
Sbjct: 514 FLLFYEKI 521
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 122/315 (38%), Gaps = 59/315 (18%)
Query: 109 VCLGCGHYACGGVGL-PTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTE 167
+C GC C G+ P H HA+ HP+ + + P +CF C
Sbjct: 98 MCSGCSQCFCAGLASNEDGPIGHAQLHAKSACHPVALWIDQPDAAYCFQC---------- 147
Query: 168 ENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACY 227
+LS V + RS N Y
Sbjct: 148 -----AHSLSLKVIALAARSH-----------------------------------NHGY 167
Query: 228 VVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRN 287
VRG+ N C+ N+++Q LLA+ L L GPL +ALK+LF ET+
Sbjct: 168 AVRGMPNFRAKCYVNALVQCLLALDDLWMSMLGPRAPAGPLGVALKELFLETRSGNDAGA 227
Query: 288 VINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQ 347
+N R IC ++ D ELL + +GL EE RK+ P + +
Sbjct: 228 FLNTRRLMESICLLDAGYRTTDHQDCQELLVHVRNGLIDEE---RKKKLPD----VRKDD 280
Query: 348 GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV-PTKKAPSKKTQPASRAKKTK 406
P VD +F G+++ C C +++ E F +LSLP+ P+KK PS+ + ++ +
Sbjct: 281 VPTVVDSIFKGEVSVMWTCSRCLNTAGKDEEFYELSLPLPPSKKHPSRSVPAIKQCRRIQ 340
Query: 407 LPPKKSGRIRAKGTK 421
+K + K
Sbjct: 341 KEEEKKAAVSLTSVK 355
>gi|242079883|ref|XP_002444710.1| hypothetical protein SORBIDRAFT_07g026450 [Sorghum bicolor]
gi|241941060|gb|EES14205.1| hypothetical protein SORBIDRAFT_07g026450 [Sorghum bicolor]
Length = 762
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 146/325 (44%), Gaps = 43/325 (13%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
+ +C+ C + C GVG P H HA + +H + + +P +CF CNT +P+
Sbjct: 184 LLICVTCYDHLCCGVGSIAYPFGHSRAHALKKKHWFAVLYCDPERGYCFKCNTEVPMPVK 243
Query: 167 EENGENKDALSEVVKLIK----------GRSTEISSVDVEDAWFGSGNVNSEIKSESTVV 216
+G ++ L E+ ++ G++ ++ VE +G V +E V
Sbjct: 244 FGDG-DEVGLQEIRNIVSRKLLAAPPSVGQTEAVNPKKVE----MTGKVQAESHPSGFGV 298
Query: 217 S--------GSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL 268
GS + Y +RG+ N GNTC+ ++V+Q L + +L++ L + L
Sbjct: 299 DLADKWPSYGSRSSDSQGYAIRGIPNRGNTCYMSAVLQCLFVLGKLRERMLALDRPKSRL 358
Query: 269 TIALKKLFAETKPETGLRNVINPRSFFGCICSK-APQFKGYQQHDSHELLRCLLDGLCSE 327
LK+LF E + +++NP C+ AP+F+ DSHELL
Sbjct: 359 VKVLKELFLEA---SAAGDLLNPNEVLECVSKDCAPRFRVGAMEDSHELL---------- 405
Query: 328 ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV- 386
+A R + E N + P +D +F ++ T+ C +CG+SS DL L
Sbjct: 406 -MALRDLWNQGEVNDNWQSHAPTAMDSIFRFKMLQTLSCKKCGYSSPTSVDLWDLKLDFP 464
Query: 387 ----PTKKAPSKKTQPASRAKKTKL 407
PTK A S++T + R++K ++
Sbjct: 465 SKWHPTKSAASQQTSESPRSRKREI 489
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 11/138 (7%)
Query: 913 DATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD 972
D K + PP+LT+HL R S K+ HV F E ++++P+MDP D
Sbjct: 616 DTNKILRFTMLPPVLTLHLNRTSHLEGANGIKITRHVRFMEYLDVKPFMDPSFVDKGRTL 675
Query: 973 YRLVGVVEHLG------TMRGGHYVAYVRGGPKNKVKAKKE--SVGGVWYHASDVYVREV 1024
YRL GVV+H+ +++ GHY+AYVR ++ ++E S W+ A D +++V
Sbjct: 676 YRLAGVVQHIDIGNGKRSLKSGHYIAYVRA---RRLGHQQEGSSCSSSWFCADDSDIKQV 732
Query: 1025 SLEEVLRCEAYILFYEKI 1042
+LEEVL CEAYILFYE++
Sbjct: 733 TLEEVLNCEAYILFYERM 750
>gi|42407956|dbj|BAD09094.1| unknown protein [Oryza sativa Japonica Group]
Length = 928
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 163/393 (41%), Gaps = 76/393 (19%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
I VCLGC + C G H HA+ T+H + +++P++ CF C ++
Sbjct: 337 ILVCLGCENPFCSG---------HADVHAKSTKHWNYLIYQSPYIVCCFVCKGIV----- 382
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ G+ E VD A SG+V
Sbjct: 383 ---------------FLGGQDKEEMPVDNATAGDASGSVIEH-----------------A 410
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
+ +RG+ NLGNTC+ NS++Q LLA+ +L+ L E T G L L+ LF +T
Sbjct: 411 HAIRGITNLGNTCYLNSLVQCLLALGRLRARMLRPEDTTGRLGTVLRYLFQDTDSVNNSG 470
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
++NP + P+ + HDSHE L L L EE + G S
Sbjct: 471 GLLNPSGLLRRVRMFVPESQVTSMHDSHEALCRLRTNLDEEERLMKY--------GALSV 522
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYE-PFLDLSLPVPTKKAPSKKTQP--ASRAK 403
+ P +D +FGGQ++ T C C SS + F DLS+P+ KK +K+ +P ++ +
Sbjct: 523 EAPTVIDSIFGGQLSVTKTCKCCSLSSVSHGIVFHDLSMPITPKKPLAKRVEPLWITKGR 582
Query: 404 KTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQL 463
+++ R + T+ TH + S + +++ PL V+ G ++
Sbjct: 583 RSQ---------RKRNTEKTHTIAEDGDSQ-------NVMVKTSEPLGVAVI---GTGKI 623
Query: 464 LDSVGSPTVATQCGSALQNVPADPLPQHDQVID 496
V S C + L N+ + + Q Q D
Sbjct: 624 AKGVESSLYNKYCSNLLVNLNSTKVEQISQSKD 656
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 18/159 (11%)
Query: 885 DSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSK 944
+++ V CE+ +++N +++ + ++ PP+L IHLKR + K
Sbjct: 785 EAETVELTCENCSKFAQKLNKSVIQTR--------LSLLPPVLVIHLKRSLLQS----DK 832
Query: 945 LNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMR-GGHYVAYVRGGPKNKVK 1003
+ GHV+F EI+++ +MDP D DN YRL V+EH G + GH+VAYVR + +
Sbjct: 833 VKGHVSFKEILDVGLFMDPSSVDKDNSIYRLASVIEHHGHGKDSGHFVAYVR-----QSR 887
Query: 1004 AKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
++ + W+ ASD +REV LEEVL+CEAY+LFYE++
Sbjct: 888 PQQTNGSSSWFWASDTDIREVPLEEVLKCEAYLLFYERM 926
>gi|13435422|gb|AAH04577.1| Usp16 protein, partial [Mus musculus]
Length = 382
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++L++ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 234 VYTNAKKQMLVSLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 292
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP-----KNKV-------KAKKESVGGVW 1013
+ Y L GVVEH GTMR GHY AY + N V + ES G W
Sbjct: 293 EESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQW 352
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V + +VL +AY+LFYE+I
Sbjct: 353 FHISDTHVQAVPITKVLNSQAYLLFYERI 381
>gi|326916155|ref|XP_003204376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like [Meleagris
gallopavo]
Length = 684
Score = 112 bits (281), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 112/212 (52%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CSV S E + +++L+ +C + K ++ ++ K+
Sbjct: 475 TLSQSYITSSKE--CSVQSCLYQFTSVE-LLMGNNKLLCESCTERKQKYQKKSNSSEKKM 531
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC-- 965
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F I++L P+ C
Sbjct: 532 EGVYTNARKQLLISSVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLILDLAPFCSASCKN 590
Query: 966 -TDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK-----------VKAKKESVG--- 1010
TD Y L G+VEH G+MRGGHY AYV+ +K V KE++G
Sbjct: 591 VTDGARVLYSLYGIVEHSGSMRGGHYAAYVKVRTPSKKLLEHISSTKNVLGLKEAMGASA 650
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G W + SD +V+ V VL +AY+LFYE++
Sbjct: 651 GQWVYVSDAHVQMVPESRVLNAQAYLLFYERL 682
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 351 FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTK 406
F+D +F G++ STV C EC + STV EPF+DLSLP+ ++ K P R K+K
Sbjct: 219 FIDRIFVGELTSTVMCEECENISTVKEPFIDLSLPIIEERVA--KPVPLGRTNKSK 272
>gi|380025651|ref|XP_003696582.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like [Apis
florea]
Length = 917
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 195/813 (23%), Positives = 309/813 (38%), Gaps = 197/813 (24%)
Query: 50 CPHLDKGIDSDKISV---KIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA 106
CPH+ K ++ +KI K+G S I C C KK K K V + A
Sbjct: 33 CPHIPKAVNFNKIKKCINKMGIS--IECSIC---------KKCKNNLSKTNEKECVMNSA 81
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQ---WENPHLRWCFPCNTL 160
I +CL CGH CG H + H ++ H +V++ W WCF C T
Sbjct: 82 ILICLQCGHQGCG-----REECGHALEHYKKPHSDCHVMVVESLYWS----VWCFQCETK 132
Query: 161 IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSD 220
+ N + L E V+ IK +T I+S ++ ++ K T +
Sbjct: 133 V-------NIGCRKKLQETVEFIKRSTTSITSSQIK--------MSLSQKETRTDTDKLE 177
Query: 221 LDGNACYV--VRGLANLGNTCFFNSVMQNLLAMSQL-----------QDYFL-------- 259
+ N + V GL NLGNTCFFN+V+Q L L Q + L
Sbjct: 178 KEKNLYNLPKVGGLMNLGNTCFFNAVLQCLAQTPFLVKVLDDLRLPGQKFILPGGKHKLS 237
Query: 260 -NAELT-----------FGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKG 307
N+E +G T L K E + G R P K Q
Sbjct: 238 SNSEEIDLPPIEGTLEGWGSFTSILCKTLTEMQNTDG-RQSYRPSELLNSFKKKTMQCMD 296
Query: 308 YQQHDSHELLRCLLDGLCSE-----------ELAFRKRNSPSEG-----------NGISS 345
QHDSHELLR LL+ + +E E+ ++ +P EG G +
Sbjct: 297 GGQHDSHELLRHLLEIVRNEDLRRYQSIILKEVGLNEKTNP-EGVEESLKSRVKFYGNQA 355
Query: 346 NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKK- 404
N + + VF G + ST+ C++C H+S EPFLDLSLPV + K QP +K
Sbjct: 356 NSRLLGAELVFRGVLVSTLECLDCHHTSQNTEPFLDLSLPV-----MADKPQPPVLKRKN 410
Query: 405 --------------TKLPPKKSGRIRAKGTKDTHAVTTQSIS--NLSISSKSQSLTESTA 448
+ +P K + K + Q I + IS+K+ + E+
Sbjct: 411 NGFEDTFDIMGNNISHVPSKHQLKKEKKAARKNRKSKKQEIHQDDNFISNKNNIVEENNG 470
Query: 449 PLSE-----NVVSSSGGSQLLDSVGSPTVATQCGSALQNVPADP----LPQHDQVIDIPV 499
L +V ++ LL VG +++ S L + PA P + ++ + ++P+
Sbjct: 471 ILKSEESDADVEDNAEIEGLLPEVGESGYSSEKQSTLAS-PASPSTDTMKTNETISEVPL 529
Query: 500 EQTVASLDDFWLDYIEPQTTGDVLDSTWQKSDVSVIQDSTDFAWLDYIEPET-------I 552
+ +Y++ T K ++S++Q F P + +
Sbjct: 530 D-----------NYLQLST----------KDNISLVQLLNRFDTNSLPSPNSANACTTNL 568
Query: 553 SDEHGLTLENNDVLFVQDSGEQDEVSDDSLINSNQIPLLDSKPNLKADSSSGDAGEDELP 612
S GL ++ F +SG Q S L + + +D +S D
Sbjct: 569 SQTKGLDTLDSSESFENESGIQTGFS------------LSTSLAMTSDLTSPDVPSINFN 616
Query: 613 LVV---QDSEVILLPYNEEISTTAEKISGEG-EASSSVVGCRQEEVDFDGFG------DL 662
V+ S I+L ++ I T K+S + + SV QEE + + D
Sbjct: 617 SVISKENTSSTIILANDKTIENT--KLSTFSLDLTESVNHIDQEESICNQWKTRRKIEDY 674
Query: 663 FNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELL 722
N+ I + +SG +G +G S P + S++SCL F EL+
Sbjct: 675 SNDISNGINNI---TSGISKIG----IGGSLQQPPTRYLTKEGECSIQSCLNQFTALELM 727
Query: 723 TDDNAWDCESCSKTLQRQKLEALKRRAKLASKP 755
+ N CE+C+ ++ +K+ K+ P
Sbjct: 728 SGSNKVSCEACTANEKK-----IKQNCKMVCTP 755
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 46/217 (21%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINK 922
EG CS+ + ++A ++ +++ C + E K+++ N K+V +TK+ LI++
Sbjct: 709 EGECSIQSCLNQ-FTALELMSGSNKVSCEACTANEKKIKQ-NCKMVCTP--STKQYLISR 764
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-YRLVGVVEH 981
P +L +HLKRF Q R K+ HV+F +++L P C +H Y L GVVEH
Sbjct: 765 VPAVLILHLKRF-QAQRVDFRKVTRHVSFPILLDLAPI----CKNHKKARIYALYGVVEH 819
Query: 982 LGTMRGGHYVAYVRGG-------------PKNKVKAKK---------------------- 1006
GT+ GGHYVAY++ P +K +
Sbjct: 820 SGTIHGGHYVAYIKSRLPLTSDDPRWSFLPSKDIKNTQENSYSSSSESETEEAAASPSST 879
Query: 1007 -ESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
E G WYH SD V EV VL+ +AY+LFYE+I
Sbjct: 880 VEPPPGKWYHVSDSRVTEVDETTVLQRQAYLLFYERI 916
>gi|148673606|gb|EDL05553.1| ubiquitin specific petidase 45, isoform CRA_a [Mus musculus]
Length = 740
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 140/302 (46%), Gaps = 62/302 (20%)
Query: 130 HVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGR 186
H +RH + + H +VI + WC+ CN EK + NK L+++V ++
Sbjct: 28 HSLRHFKSSGTESHCVVISLST-WVIWCYECN-----EKLSTHC-NKKVLAQIVDFLQKH 80
Query: 187 STEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYV--VRGLANLGNTCFFNSV 244
+ + + A+ + E + + G C V V+G+ NLGNTCFFN+V
Sbjct: 81 AFKTQT----GAFSRIIKLCEEKREAGEIKKGK----KGCTVPSVKGITNLGNTCFFNAV 132
Query: 245 MQNLLAMSQLQDYF----------------------LNAELTF-GPLTIALKKLFAETKP 281
+QNL L + L EL+ GPLT AL LF +
Sbjct: 133 IQNLAQTYILFELMNEIKEDGTKFKISLSSAPQLEPLVVELSSPGPLTSALF-LFLHSMK 191
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELA------FRKRN 335
E + ++P+ F +C KAP+FKG+QQ DS ELL LLD + +EE + N
Sbjct: 192 EAE-KGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHHLLDAVRTEETKRIQASILKAFN 250
Query: 336 SPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+P+ + V F+D +F G++ STV C EC + ST+ +PF+D+SL
Sbjct: 251 NPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMCEECANISTMKDPFIDISL 310
Query: 385 PV 386
P+
Sbjct: 311 PI 312
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ +T E CSV +++ ++ +++L+ +C + K + S K
Sbjct: 534 SQSYVTTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCEDCTEKRRKCHKETSSAEKKAGG 590
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 591 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCAATCKNIS 649
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKNKVKAKKE--SVGGV 1012
+ Y L G+VEH G+MRGGHY AYV+ G K K+ +GG
Sbjct: 650 VGEKVLYGLYGIVEHSGSMRGGHYTAYVKVRVPSRKLSECITGRKTAAGLKEPDGELGGH 709
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 710 WVHVSDTYVQVVPESRALSAQAYLLFYERI 739
>gi|157128456|ref|XP_001661436.1| hypothetical protein AaeL_AAEL011146 [Aedes aegypti]
gi|108872578|gb|EAT36803.1| AAEL011146-PA, partial [Aedes aegypti]
Length = 476
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 26/200 (13%)
Query: 862 DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK-VKRDATKRVLI 920
+E CS+ ++ ++A ++ +++ C E IN K K V +ATK+ LI
Sbjct: 283 EENECSIQSCLNA-FTAAELMTGSNKVCCDAC------TERINGKDGKSVNTNATKQFLI 335
Query: 921 NKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------Y 973
+ P +L +HLKRF RG L K+N V F ++++ P+ N Y
Sbjct: 336 SSPPAVLILHLKRFQVGPRGMLRKINKSVTFPFVLDIAPFCGSKVKKLPNVKHGQKKLLY 395
Query: 974 RLVGVVEHLGTMRGGHYVAYVRGGPK-----------NKVKAKKESVGGVWYHASDVYVR 1022
L G+VEH GTM GGHYVAYV+ P+ A G WY+ SD +VR
Sbjct: 396 SLYGIVEHSGTMHGGHYVAYVKVRPQLTRDDPRSQSSTGTTASDGEEEGAWYYVSDSHVR 455
Query: 1023 EVSLEEVLRCEAYILFYEKI 1042
E + ++VL AY+LFYE+I
Sbjct: 456 ETTEDQVLNASAYLLFYERI 475
Score = 46.6 bits (109), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLP 408
VF G + ST++C +C H S+ +E FLDLSLPV T+K QP R K + P
Sbjct: 45 VFRGFLVSTLKCQDCDHVSSRHESFLDLSLPVSTEKP-----QPPIRRKGSPEP 93
>gi|328701431|ref|XP_003241597.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 2
[Acyrthosiphon pisum]
Length = 851
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 221/538 (41%), Gaps = 119/538 (22%)
Query: 47 RKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA 106
+ PC H+ K ++ + ++ K +C +C K S+L +
Sbjct: 40 KHPCTHVKKAVNVNNVN-KCLQKVVSQCSEC-------------------KNSNL---EE 76
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV 163
+++C+ CG + C + + +H+++H R H + + + C C I V
Sbjct: 77 LYICIQCGSFHCSNLEI-----NHILKHQNTPRSDSHSIAVNI-GSLIILCNDCKKEISV 130
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVE------DAWFGSGNVNSEIKSESTVVS 217
+++ ++++ + ++ G++ +++ + ++ DA + S K + V
Sbjct: 131 TSSKKLQVIINSINHMKQVQTGKN-KMNDLPIQGCSTEADAQYDKLISESSPKKCNGVNK 189
Query: 218 GSDLDGNA-----------------CYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN 260
D D + C RGL NLGNTCF+NSV+Q L L+ + L+
Sbjct: 190 SDDDDAPSLKKTFDPSENITNNVERCKRPRGLTNLGNTCFYNSVLQCLAQTPFLRKFLLD 249
Query: 261 AELTFGPLTIAL----------------KKLFAETKPETGLR-NVINPRSFFGCICSKAP 303
+ P+TI L + L+ + T R + P + + K
Sbjct: 250 ISESGEPMTIKLDNEDITVHQEKWSSLTENLYTTLQEITNERESTFTPSALLDSLRKKCK 309
Query: 304 QFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVD---------- 353
F GY QHDSHELLR LLD + ++L R + + G+S P VD
Sbjct: 310 MFIGYSQHDSHELLRHLLDSVRDDDLK-RYKKTIVHHYGLSMKVEPSEVDEKKTAKIKEL 368
Query: 354 ------------YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA-----PSKK- 395
+VF G++ S V+C CG+ S V E FLDLSLP+ K P KK
Sbjct: 369 GKKLQDVLLRPDHVFKGELLSVVQCQTCGYKSEVTESFLDLSLPITVDKTHPLSFPRKKD 428
Query: 396 ----TQPASRAKKTKLPPKKSGRIRAKGTK-------DTHAVTTQS--ISNLSISSKSQS 442
+Q + KK + K GR + K DT AV + N+ I +
Sbjct: 429 NDVFSQSKHQTKKERKLALKQGRRKKHEQKQFNNKMQDTLAVNNDADIEDNMEIETNEIE 488
Query: 443 LTESTAPLSENVVSSSGGSQLLDSVGSPTVA-TQCGSALQNVP-ADPLPQH--DQVID 496
++ EN S G + +V SP+++ T+ + + N P ADP Q DQ++D
Sbjct: 489 MSIWKNENKENPESGYGSEKQPSNVTSPSLSITELTTLMNNTPLADPDRQMDADQILD 546
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 33/189 (17%)
Query: 886 SQLVAGN----CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGR 941
S+++ GN CE + ++ ++ + R +TK++LI+ P IL +HLKRF Q
Sbjct: 663 SEIMTGNNKVSCERCTEQHKKKTNEEKTIYRQSTKQMLISSPPAILILHLKRF-QMCYST 721
Query: 942 LSKLNGHVNFSEIINLRPYMDPGCTD-----HDNYDYRLVGVVEHLGTMRGGHYVAYVRG 996
K+ V+F ++++ PY C + + Y L GVVEH G + GHY++YV+
Sbjct: 722 TRKMTRDVSFQWVLDIAPYCSVKCQNKLSPGQNRILYSLYGVVEHNGFLHSGHYLSYVKV 781
Query: 997 GPKNKVKAKKESV-----------------------GGVWYHASDVYVREVSLEEVLRCE 1033
K + + S G WY SD VR+V+ V C+
Sbjct: 782 RDPVKDDSYRYSFLEGSKTKPPKVIDGNDDPSHLAPSGTWYCVSDSMVRQVTPNVVQNCQ 841
Query: 1034 AYILFYEKI 1042
AY+LFYE+I
Sbjct: 842 AYLLFYERI 850
>gi|119568857|gb|EAW48472.1| hCG17265, isoform CRA_d [Homo sapiens]
Length = 756
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 550 SQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKVEG 606
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 607 VYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNAS 665
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV---------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 666 VGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADSESAGQ 725
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD Y++ V L +AY+LFYE++
Sbjct: 726 WVHVSDTYLQVVPESRALSAQAYLLFYERV 755
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 151/365 (41%), Gaps = 104/365 (28%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RNLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
D + +EE STV +PF+D
Sbjct: 303 DAVRTEETKI-----------------------------------------STVKDPFID 321
Query: 382 LSLPV 386
+SLP+
Sbjct: 322 ISLPI 326
>gi|403331397|gb|EJY64643.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 850
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 15/180 (8%)
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLA-MSQLQDYFLNAELTF---GP--LTIALKKLFAET 279
CY RG+ NLGNTCFFNS +Q L A S + Y + + F GP + + L+ LF E
Sbjct: 309 CY--RGMQNLGNTCFFNSTIQCLNASRSLILTYVIPRDSDFIYQGPESINLQLRNLFFEI 366
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+ + G V NP+ FF IC K +F+G+QQ D+H+LL + D L +E KR+ +
Sbjct: 367 RKQRG---VYNPKDFFALICKKNSRFRGFQQQDAHDLLLNMFDMLQNEHDNELKRSKEEK 423
Query: 340 GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPA 399
GI + V+ VFGG +TV C+EC S EP LD+SL + K ++ P
Sbjct: 424 MRGIQKS----LVEEVFGGYFLNTVLCLECQRVSRTREPALDISLTISFKNQNNQFMNPT 479
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 71/152 (46%), Gaps = 28/152 (18%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
+ K A KR L+ P L I+LKRF+Q A K V F +NL Y+ +
Sbjct: 707 RYKTHALKRYLLIDPPNNLVINLKRFTQSA-FTFYKNCKRVTFPLELNLDNYLIHKVMQN 765
Query: 969 DN------------------YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG 1010
D Y YRL GVV H G M GGHYVAYV K
Sbjct: 766 DQQSFDQYLNAKMNEPWTPQYKYRLYGVVSHAGGMGGGHYVAYVNYEYKE---------D 816
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W++ SD +V V +++VL CEAYILFY++I
Sbjct: 817 NYWFYMSDTFVDRVDVDKVLACEAYILFYKRI 848
>gi|67969921|dbj|BAE01308.1| unnamed protein product [Macaca fascicularis]
Length = 516
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 369 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 427
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 428 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 487
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 488 HISDTHVQAVPTTKVLNSQAYLLFYERI 515
Score = 53.1 bits (126), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 349 PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P FVD +FGG++ ST+ C +C S V+E FLDLSLPV
Sbjct: 42 PSFVDRIFGGELTSTIMCDQCRTVSLVHESFLDLSLPV 79
>gi|30722296|emb|CAD91148.1| hypothetical protein [Homo sapiens]
Length = 567
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 359 TLSQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKV 415
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 416 EGVYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKN 474
Query: 968 H---DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV-------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 475 ASVGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADSESA 534
Query: 1013 --WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD Y++ V L +AY+LFYE++
Sbjct: 535 GQWVHVSDTYLQVVPESRALSAQAYLLFYERV 566
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 19/138 (13%)
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LLD +
Sbjct: 2 GPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLLDAVR 59
Query: 326 SEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRCVE 368
+EE + N+P+ + V F+D +F G++ STV C E
Sbjct: 60 TEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMCEE 119
Query: 369 CGHSSTVYEPFLDLSLPV 386
C + STV +PF+D+SLP+
Sbjct: 120 CANISTVKDPFIDISLPI 137
>gi|328701433|ref|XP_001952782.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 1
[Acyrthosiphon pisum]
gi|328701435|ref|XP_003241598.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 3
[Acyrthosiphon pisum]
Length = 706
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 145/333 (43%), Gaps = 63/333 (18%)
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIAL------------- 272
C RGL NLGNTCF+NSV+Q L L+ + L+ + P+TI L
Sbjct: 70 CKRPRGLTNLGNTCFYNSVLQCLAQTPFLRKFLLDISESGEPMTIKLDNEDITVHQEKWS 129
Query: 273 ---KKLFAETKPETGLR-NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEE 328
+ L+ + T R + P + + K F GY QHDSHELLR LLD + ++
Sbjct: 130 SLTENLYTTLQEITNERESTFTPSALLDSLRKKCKMFIGYSQHDSHELLRHLLDSVRDDD 189
Query: 329 LAFRKRNSPSEGNGISSNQGPVFVD----------------------YVFGGQIASTVRC 366
L R + + G+S P VD +VF G++ S V+C
Sbjct: 190 LK-RYKKTIVHHYGLSMKVEPSEVDEKKTAKIKELGKKLQDVLLRPDHVFKGELLSVVQC 248
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKA-----PSKK-----TQPASRAKKTKLPPKKSGRIR 416
CG+ S V E FLDLSLP+ K P KK +Q + KK + K GR +
Sbjct: 249 QTCGYKSEVTESFLDLSLPITVDKTHPLSFPRKKDNDVFSQSKHQTKKERKLALKQGRRK 308
Query: 417 AKGTK-------DTHAVTTQS--ISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSV 467
K DT AV + N+ I + ++ EN S G + +V
Sbjct: 309 KHEQKQFNNKMQDTLAVNNDADIEDNMEIETNEIEMSIWKNENKENPESGYGSEKQPSNV 368
Query: 468 GSPTVA-TQCGSALQNVP-ADPLPQH--DQVID 496
SP+++ T+ + + N P ADP Q DQ++D
Sbjct: 369 TSPSLSITELTTLMNNTPLADPDRQMDADQILD 401
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 33/189 (17%)
Query: 886 SQLVAGN----CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGR 941
S+++ GN CE + ++ ++ + R +TK++LI+ P IL +HLKRF Q
Sbjct: 518 SEIMTGNNKVSCERCTEQHKKKTNEEKTIYRQSTKQMLISSPPAILILHLKRF-QMCYST 576
Query: 942 LSKLNGHVNFSEIINLRPYMDPGCTD-----HDNYDYRLVGVVEHLGTMRGGHYVAYVRG 996
K+ V+F ++++ PY C + + Y L GVVEH G + GHY++YV+
Sbjct: 577 TRKMTRDVSFQWVLDIAPYCSVKCQNKLSPGQNRILYSLYGVVEHNGFLHSGHYLSYVKV 636
Query: 997 GPKNKVKAKKESV-----------------------GGVWYHASDVYVREVSLEEVLRCE 1033
K + + S G WY SD VR+V+ V C+
Sbjct: 637 RDPVKDDSYRYSFLEGSKTKPPKVIDGNDDPSHLAPSGTWYCVSDSMVRQVTPNVVQNCQ 696
Query: 1034 AYILFYEKI 1042
AY+LFYE+I
Sbjct: 697 AYLLFYERI 705
>gi|194379266|dbj|BAG63599.1| unnamed protein product [Homo sapiens]
Length = 513
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 366 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 424
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 425 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 484
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 485 HISDTHVQAVPTTKVLNSQAYLLFYERI 512
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 349 PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P FVD +FGG++ S + C +C S V+E FLDLSLPV
Sbjct: 42 PSFVDRIFGGELTSMIMCDQCRTVSLVHESFLDLSLPV 79
>gi|119568856|gb|EAW48471.1| hCG17265, isoform CRA_c [Homo sapiens]
Length = 494
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 286 TLSQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKV 342
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 343 EGVYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKN 401
Query: 968 H---DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV-------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 402 ASVGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADSESA 461
Query: 1013 --WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD Y++ V L +AY+LFYE++
Sbjct: 462 GQWVHVSDTYLQVVPESRALSAQAYLLFYERV 493
>gi|431838126|gb|ELK00058.1| Ubiquitin carboxyl-terminal hydrolase 45 [Pteropus alecto]
Length = 714
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 42/198 (21%)
Query: 229 VRGLANLGNTCFFNSVMQNL---LAMSQLQDYF-------------------LNAELTF- 265
V+G+ NLGNTCFFN+VMQNL +++L + L EL+
Sbjct: 118 VKGITNLGNTCFFNAVMQNLAQSYILTELMNEIKENGTKLKIFPSADSQLDPLMVELSSP 177
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LLD +
Sbjct: 178 GPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKSFQQQDSQELLHYLLDAVR 235
Query: 326 SEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVRCVE 368
+EE + N+P+ + V F+D +F G++ STV C E
Sbjct: 236 TEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTVMCEE 295
Query: 369 CGHSSTVYEPFLDLSLPV 386
C + S V +PF+D+SLP+
Sbjct: 296 CANISMVKDPFIDISLPI 313
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 48/209 (22%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK-- 909
+ SQ IT E CSV +++ ++ +++L+ NC ++ K + S K
Sbjct: 535 TLSQSYITTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCENCTEKKHKYQRETSSTEKKT 591
Query: 910 --VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
+A K++LI+ P IL +HLKRF Q+ VN E +
Sbjct: 592 EGAYTNARKQLLISAVPTILILHLKRFHQN-----------VNVGEKV------------ 628
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKN--KVKAKKESVGGVW 1013
Y L G+VEH G+MRGGHY AYV+ G KN +K G W
Sbjct: 629 ----LYGLYGIVEHSGSMRGGHYTAYVKVRTPSRKLLEHITGKKNVPGLKEPDSESAGQW 684
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD YV+ V L +AY+LFYE++
Sbjct: 685 VHVSDTYVQVVPESRALSAQAYLLFYERV 713
>gi|194374643|dbj|BAG62436.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C +
Sbjct: 305 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 363
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
+ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 364 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 423
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 424 HISDTHVQAVPTTKVLNSQAYLLFYERI 451
>gi|340371145|ref|XP_003384106.1| PREDICTED: hypothetical protein LOC100632359 [Amphimedon
queenslandica]
Length = 817
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 107/227 (47%), Gaps = 55/227 (24%)
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT--------------FGPLTIAL 272
+ V GL NLGNTCFFN+V+QNL + + L ++ L+ PL + +
Sbjct: 45 FPVPGLNNLGNTCFFNAVLQNL-SQTHLLRQRMSQHLSVTSYSLSIPSGSDDLAPLEVTV 103
Query: 273 KK-------------LFAETKPETGLRN-VINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
K+ L+ G+ N ++NPR F +C AP+F YQQ DSHELLR
Sbjct: 104 KRNDEGAKTEDFAIDLYRFLVDMNGMSNRILNPRIIFNHVCKSAPRFNSYQQQDSHELLR 163
Query: 319 CLLDGLCSEELAFRKR---------NSPSEGN-------------GISSNQGPVFVDYVF 356
LLD L SEE+ RK P + G+ ++ +++ VF
Sbjct: 164 YLLDALKSEEIQRRKVAILKSYGVCKKPDKVKTLTDDDKKAIKLYGMQASMMDTYLEDVF 223
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA----PSKKTQPA 399
GG++ S++ C C + + E LDLSLP+P+ K P K +P+
Sbjct: 224 GGKLTSSITCHSCQTCTDMQEDILDLSLPIPSDKVLHRFPKSKRKPS 270
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 35/182 (19%)
Query: 894 ESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARG--RLSKLNGHVNF 951
E+ S EE S+ V +ATK++LI+ P +L I LKRF+Q R L K N H++F
Sbjct: 634 ETAISDREENESECDLVFTEATKQLLIDHPPRVLCIQLKRFTQLGRNLSSLQKNNAHIDF 693
Query: 952 SEIINLRPYMDPGCTDHDNYD----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKE 1007
+ ++++ Y CTD+ + D Y L GVV H G+MRGGHY AYVR +++++ ++
Sbjct: 694 TFLLDIASYCTDKCTDYFDSDGRLMYSLYGVVIHGGSMRGGHYTAYVRV--RSEIQLERL 751
Query: 1008 SVGGV---------------------------WYHASDVYVREVSLEEVLRCEAYILFYE 1040
+V V WY+ SD V + S ++V + +AY+LFYE
Sbjct: 752 TVNKVTESETINSDNEHIETRSFDYTSMENSQWYYISDTQVSKASADDVSQSQAYLLFYE 811
Query: 1041 KI 1042
++
Sbjct: 812 RL 813
Score = 40.0 bits (92), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 627 EEISTTAEKISGEG---EASSSVVGCRQEEVDFDGFGDLFNEP---ETAIGPVPRPSSGT 680
E+IS +A+ + ++S++V+ +D G L NEP + +I VP T
Sbjct: 444 EDISNSAQTVDSSATVIDSSATVIDSSATVID-TGSIVLENEPVPLDLSIEIVP-----T 497
Query: 681 ESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQ 740
E G+ VV + P+E D+ S++SCL F PE+L + C C++ +
Sbjct: 498 EPSGATPVVAKQKPAPPEE----DNLFSLQSCLRDFTSPEILKGTEKFCCNVCTEKARST 553
Query: 741 KLEALKRRAKLASKPL 756
K + +++K S PL
Sbjct: 554 KSKGTAKKSKEESSPL 569
>gi|91088981|ref|XP_966828.1| PREDICTED: similar to CG4165 CG4165-PA [Tribolium castaneum]
gi|270011550|gb|EFA07998.1| hypothetical protein TcasGA2_TC005587 [Tribolium castaneum]
Length = 849
Score = 110 bits (274), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 172/427 (40%), Gaps = 100/427 (23%)
Query: 50 CPHLDKGIDSDKIS---VKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA 106
C H+ + +D K+ +K G + CE C K K + +
Sbjct: 29 CRHVRQAVDLQKVKKALIKTGLT--TECEQC----------KKMPKVASEMEPEFEFDNS 76
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV 163
+W+CL CG+ ACG H + H + H + + N + WC+ C+ ++
Sbjct: 77 LWLCLRCGNQACG-----RNKNMHALEHFKTPHSDSHAICVDTTNWSV-WCYDCDEVV-- 128
Query: 164 EKTEENGENKDALSEVV----KLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGS 219
N K L E V KL +G+S + V + S++ G+
Sbjct: 129 -----NATCKKKLLEAVEYLQKLAEGKSNALPKP-------AEHQVMDLVPVTSSMSFGN 176
Query: 220 DLDGNACYVVR--GLANLGNTCFFNSVMQ---------NLLA-------MSQLQDYFLNA 261
+ A V R GL NLGNTCFFNSV+Q NLL QL LN
Sbjct: 177 MFNFTASNVPRPRGLMNLGNTCFFNSVVQCLAQTPYLLNLLQETSEPGQFFQLPGGKLNP 236
Query: 262 E----LTFGPLTIALKKL------FAETKPET--GLRNVINPRSFFGCICSKAPQFKGYQ 309
+ PLT L+K AET E G PR + ++ PQF G
Sbjct: 237 QDSDSPVLEPLTGELEKWRPLMATLAETIVEVNNGRSEAYVPRLLLSKLTARMPQFGGGN 296
Query: 310 QHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVD---------------- 353
QHDSHELLR LL+ + E+L R ++ + G+++ P V+
Sbjct: 297 QHDSHELLRHLLEAVREEDLR-RYQSVILDRLGLNTKTDPSTVEGEKKKIIKFYGQQASD 355
Query: 354 ------YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKL 407
VF G + ST++C EC H+S E FLDLSLP+ K+ P P R K ++
Sbjct: 356 LLLPTEQVFRGVLVSTLQCQECQHTSHRDEFFLDLSLPITEKQLP-----PVLRRKAEEI 410
Query: 408 PPKKSGR 414
K R
Sbjct: 411 EDNKPSR 417
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 31/163 (19%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHD 969
V +ATK++LI P +L +HLKRF Q R R +K+ V F +++L P+ +
Sbjct: 687 VYTNATKQLLIYNPPAVLILHLKRF-QVYRFRSAKVPKFVKFPTLLDLAPFCSKRSQNLP 745
Query: 970 NYD-------YRLVGVVEHLGTMRGGHYVAYVRGGPK-----------------NKVKAK 1005
++ Y L GVVEH G++ GGHYVAYV+ PK K +A
Sbjct: 746 TFEAGQTKVLYSLYGVVEHSGSIHGGHYVAYVKVRPKLEENSYRWQFLPKNQKNEKGQAP 805
Query: 1006 KESVG------GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
K + G G WY+ SD +V E S VL +AY+LFYE+I
Sbjct: 806 KGAQGEPEVPSGKWYYISDSHVSEASETRVLSAQAYLLFYERI 848
>gi|125562284|gb|EAZ07732.1| hypothetical protein OsI_29987 [Oryza sativa Indica Group]
Length = 545
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 6/102 (5%)
Query: 942 LSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLG-TMRGGHYVAYVRGGPKN 1000
L+K+ GHV+F EI+++ +MDP D DN YRLVG VEHLG +M GHYVAYVR P
Sbjct: 447 LTKVIGHVSFKEILDVGQFMDPSSEDRDNSRYRLVGFVEHLGPSMYAGHYVAYVRPSPPQ 506
Query: 1001 KVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+ W+ ASD + EVSLEEVL+ EAY+LFYE+I
Sbjct: 507 QTNGSSS-----WFRASDTDITEVSLEEVLKREAYLLFYERI 543
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 30/255 (11%)
Query: 103 DSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIP 162
+ + I CL C C +H HA +H + + ++ PH+ +CF C
Sbjct: 144 EGREISACLDCESRFC---------TTHGKWHASVNKHWVALVYKKPHVAYCFACEECYF 194
Query: 163 VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLD 222
+ +TE G D + ++ + VD NV + S S +
Sbjct: 195 I-RTEHFGVVMDNEDDYFISLREEDEKGMRVD---------NVAGDHASGSVI------- 237
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPE 282
G+AC ++G+ NLGNTC+ NS++Q LL + +L+ L + G L +L+ LF +
Sbjct: 238 GHAC-PIKGIPNLGNTCYLNSLLQCLLVLGRLRAGILGLDAPLGLLGSSLRSLFDDADSV 296
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+++P C+ P+FKG HDS E L L GL EE A + N + G
Sbjct: 297 NNAGGLLDPEKLLACVRMLNPEFKGNGMHDSQEALCILRTGLDKEERAMKLSNMQA---G 353
Query: 343 ISSNQGPVFVDYVFG 357
S P +D +FG
Sbjct: 354 APSAVAPTVIDSIFG 368
>gi|350424391|ref|XP_003493780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Bombus
impatiens]
Length = 918
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 165/407 (40%), Gaps = 104/407 (25%)
Query: 50 CPHLDKGIDSDKISV---KIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA 106
CPH+ K ++ +KI K+G S + C C KK K K V + A
Sbjct: 33 CPHIPKAVNFNKIKKCVNKVGIS--MECSIC---------KKCKNDSSKLNEKECVTNSA 81
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQ---WENPHLRWCFPCNTL 160
+ +CL CG+ CG H + H ++ H +V++ W WCF C T
Sbjct: 82 VLICLQCGYQGCGREEC-----GHALEHYKKPHSDCHVMVVESLYWS----VWCFQCETK 132
Query: 161 IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSD 220
I N + L E V+ IK ST +S+ + + ++ ++E+ +S D
Sbjct: 133 I-------NIGCRKKLQETVEFIKRSSTVKNSLQTKTSI-------TQYQNETVDISKVD 178
Query: 221 LDGNACYV--VRGLANLGNTCFFNSVMQNLLAMSQL-----------QDYFL-------- 259
+ + V GL NLGNTCFFN+V+Q L L Q + L
Sbjct: 179 KEKGLYNLPKVGGLMNLGNTCFFNAVLQCLAQTPFLVKVLDDLRLPGQKFILPGGKHKFA 238
Query: 260 -NAELT-----------FGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKG 307
N+E +G T L K E + T R P K Q
Sbjct: 239 NNSEEVDLPPIEGILEGWGSFTSILCKTLTEMQ-NTDERQSYRPSELLNSFKKKTTQCMD 297
Query: 308 YQQHDSHELLRCLLDGLCSE-----------ELAFRKRNSPS------------EGNGIS 344
QHDSHELLR LL+ + +E E+ ++ +P GN S
Sbjct: 298 GGQHDSHELLRHLLEIVRNEDLRRYQSIILKEVGLNEKTNPEGVEENLKSRVKFYGNQAS 357
Query: 345 SNQ-GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
S GP + VF G + ST+ C++C HSS EPFLDLSLPV K
Sbjct: 358 SRLLGP---ELVFRGVLVSTLECLDCHHSSQSTEPFLDLSLPVMADK 401
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 103/217 (47%), Gaps = 46/217 (21%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINK 922
EG CS+ + ++A ++ +++ C + E KV N K++ +TK+ LI++
Sbjct: 710 EGECSIQSCLNQ-FTALELMSGSNKVSCEACTARERKVRP-NCKMICTP--STKQYLISR 765
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-YRLVGVVEH 981
P +L +HLKRF Q R K+ HV+F +++L P C +H Y L GVVEH
Sbjct: 766 VPAVLILHLKRF-QAQRVDFRKVTRHVSFPILLDLAPI----CKNHKKARIYALYGVVEH 820
Query: 982 LGTMRGGHYVAYVRGG-------------PKNKVKAKKESVG------------------ 1010
GT+ GGHYVAYV+ P V+ +ES
Sbjct: 821 SGTIHGGHYVAYVKSRLALTSDDPRWSFLPPKDVRDLQESSYSSSSESETEEAAAAPSST 880
Query: 1011 -----GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WYH SD V EV VL+ +AY+LFYE+I
Sbjct: 881 VRPPPGKWYHVSDSRVTEVDETTVLQRQAYLLFYERI 917
>gi|332023099|gb|EGI63360.1| Ubiquitin carboxyl-terminal hydrolase 45 [Acromyrmex echinatior]
Length = 921
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 110/218 (50%), Gaps = 46/218 (21%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINK 922
EG CSV+ + ++A ++ +++V C + E K +E +SK+V +TK+ LI++
Sbjct: 711 EGECSVESCLNQ-FTALELMTGSNKVVCEACTAREKKTQEGSSKMVCT--SSTKQYLISQ 767
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-YRLVGVVEH 981
PPIL +HLKRF Q R K+ HV+F +++L P CTD Y L GVVEH
Sbjct: 768 VPPILILHLKRF-QTQRIGFRKVFKHVSFPILLDLAPV----CTDRKKSRLYALYGVVEH 822
Query: 982 LGTMRGGHYVAYVRGG-------------PKNK--------------------VKAKKES 1008
GT+ GGHYVAYV+ PK+K AK S
Sbjct: 823 SGTVHGGHYVAYVKTRLPLSPDDLRWKFLPKDKDSNSINSNNESNSLDSDEEEASAKGIS 882
Query: 1009 V----GGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+ G WY+ SD V EV VL+ +AY+LFYE+I
Sbjct: 883 IVEPPPGKWYYVSDSRVSEVDENTVLQSQAYLLFYERI 920
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 160/401 (39%), Gaps = 93/401 (23%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPI-RCEDCREGVGDRRGKKGKGKHGKKKGSSLVD-SKAI 107
CPH+ K I+ +K+ + + + +C C++ D + K + D SK +
Sbjct: 32 CPHIAKAINLNKVKKNLKKTGILSKCSMCKKLEMDLKTTK-----------EICDISKPL 80
Query: 108 WVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLR-WCFPCNTLIPV 163
W+CL CG C + H H R+ H +V ++ H + WC+ C
Sbjct: 81 WICLQCGEQGCN-----KEEKQHAFEHYRKPHSDCHCMVT--DSHHWKVWCYQC------ 127
Query: 164 EKTEENGENKDALSEVVKLIKGRST--EISSVDVEDAWFGSGNVNSEIKSESTVVSGSDL 221
+ E + ++ L E V+ IK +IS + + + E ++
Sbjct: 128 -EIEVHPNSRKKLLETVEFIKKYVNIPQISQSKMPVIQCQKETIIDVQEKEHKIL----- 181
Query: 222 DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQL-----------QDYFL----------N 260
N V GLANLGNTCFFN+V+Q L L Q + L
Sbjct: 182 --NNLPKVGGLANLGNTCFFNAVLQCLAQTPYLVKVLDDLRIPGQKFVLPGGKHKPIDAE 239
Query: 261 AELTFGPLTIALKK------LFAETKPE---TGLRNVINPRSFFGCICSKAPQFKGYQQH 311
E+ P+ L++ + ET + T P + + K Q QH
Sbjct: 240 EEVELPPIEGTLERWGSFTSILCETLSKMQNTNGHQTYTPLNLLCKLRKKTTQCVDGGQH 299
Query: 312 DSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVD------------------ 353
DSHE LR LL+ + +E+L R ++ + G+S P V+
Sbjct: 300 DSHEFLRHLLEIVRNEDLR-RYQSIILKEVGLSGKTKPDCVEKSLKSRVKFYGNQASTRL 358
Query: 354 ----YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
VF G + ST+ C++C HSS EPFLDLSLPV K
Sbjct: 359 LGPEVVFRGVLVSTLECLDCHHSSQRTEPFLDLSLPVTADK 399
>gi|218201493|gb|EEC83920.1| hypothetical protein OsI_29978 [Oryza sativa Indica Group]
Length = 615
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 136/329 (41%), Gaps = 47/329 (14%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
+ VC C Y C PQ H+ HA H + + + ++ +CF C + +
Sbjct: 225 MMVCSECKGYFCIEPATKAKPQGHIREHALLQEHWVAVWHNDLYVGYCFECEDSLVIGGE 284
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
E K+ L+ VN+E S + SGS DG+ C
Sbjct: 285 E----GKEGLA---------------------------VNAEAGSHA---SGSS-DGHGC 309
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
V+RG++N GNTC N++++ LL + +L+ G L L+ LF +
Sbjct: 310 -VIRGISNQGNTCL-NALLRCLLVLGKLRARMFGPNAPLGILGTILRGLFVDANSVRHAP 367
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
+N C+ G HDSHELL CL + L E+ R P++ G S+
Sbjct: 368 GPLNRALLLACVRRFDSWLIGTSIHDSHELLCCLRNRLNEEDKIIRP---PNKQQGSPSS 424
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS-------KKTQPA 399
P +D FGG+++ T C C S + F DLS+P+P K APS + +P
Sbjct: 425 VAPTVIDSTFGGELSVTTSCKRCSFKSYSRDVFYDLSVPLPPKGAPSNSVASPPQNERPI 484
Query: 400 SRAKKTKLPPKKSGRIRAKGTKDTHAVTT 428
S+ K L +I +DT V T
Sbjct: 485 SQCKICVLSEGGDSQIPPSELEDTVMVKT 513
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 68/102 (66%), Gaps = 6/102 (5%)
Query: 942 LSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLG-TMRGGHYVAYVRGGPKN 1000
L ++GHV+F EI+++ P+MDP D + YRLVGV+E+ G ++ G VAYVR
Sbjct: 517 LEVVSGHVSFKEILDVEPFMDPSSEDKFSSRYRLVGVIENRGLSIDIGQCVAYVRAN--- 573
Query: 1001 KVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
++ S WY A+D ++E+SLEEVL+CEAY+LFYE++
Sbjct: 574 --NQQQGSGSSSWYCATDDDIKEISLEEVLKCEAYLLFYERM 613
>gi|215768380|dbj|BAH00609.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 137/329 (41%), Gaps = 47/329 (14%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
+ VC C Y C PQ H+ HA H + + + ++ +CF C + +
Sbjct: 225 MMVCSECKGYFCIEPATKAKPQGHIREHALLQEHWVAVWHNDLYVGYCFECEDSLVIGGE 284
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
E K+ L+ VN+E S + SGS DG+ C
Sbjct: 285 E----GKEGLA---------------------------VNAEAGSHA---SGSS-DGHGC 309
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLR 286
V+RG++N GNTC N++++ LL + +L+ G L L+ LF +
Sbjct: 310 -VIRGISNQGNTCL-NALLRCLLVLGKLRARMFGPNAPLGILGTILRGLFVDANSVRHAP 367
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
+N C+ G HDSHELL CL + L E+ R P++ G S+
Sbjct: 368 GPLNRALLLACVRRFDSWLIGTSIHDSHELLCCLRNRLNEEDKIIRP---PNKQQGAPSS 424
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS-------KKTQPA 399
P +D +FG +++ T C C S + F DLS+P+P K APS + +P
Sbjct: 425 VAPTVIDSIFGSELSVTTSCKRCSFKSYSCDVFYDLSVPLPPKGAPSNSVASPPQNERPI 484
Query: 400 SRAKKTKLPPKKSGRIRAKGTKDTHAVTT 428
S+ K L +I A +DT V T
Sbjct: 485 SQCKICVLSEGGDSQIPASELEDTVMVKT 513
>gi|30268178|emb|CAD89915.1| hypothetical protein [Homo sapiens]
Length = 494
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 286 TLSQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKV 342
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 343 EGVYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKN 401
Query: 968 HD---NYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV-------- 1012
Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 402 ASVGGKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADSESA 461
Query: 1013 --WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD Y++ V L +AY+LFYE++
Sbjct: 462 GQWVHVSDTYLQVVPESRALSAQAYLLFYERV 493
>gi|395752692|ref|XP_002830636.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like, partial
[Pongo abelii]
Length = 152
Score = 108 bits (269), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 18/149 (12%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 5 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 63
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK------------VKAKKESVGGVW 1013
++ Y L GVVEH GTMR GHY AY + N + ES G W
Sbjct: 64 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTTNSHLYNLVLHGDIPQDFEMES-KGQW 122
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 123 FHISDTHVQAVPTTKVLNSQAYLLFYERI 151
>gi|440791317|gb|ELR12560.1| putative ubiquitin carboxylterminal hydrolase 11, putative
[Acanthamoeba castellanii str. Neff]
Length = 1170
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 95/184 (51%), Gaps = 26/184 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELT-FGPLTIA--LKKLFAE--TKP 281
GL NLGNTCF NS +Q L + L +FLN AE+ PL + L K F E
Sbjct: 342 GLHNLGNTCFMNSALQCLSNTTPLLRFFLNNAHLAEINPTNPLGMKGELAKKFGELLVNL 401
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL-----------CSEELA 330
+G + PR F + APQF GYQQHDS ELL +LDG+ +E+L
Sbjct: 402 WSGKYTTVVPREFKSVLSKFAPQFAGYQQHDSQELLSFVLDGIHEDLNRIIQKPYTEKLE 461
Query: 331 FRKRNSPSEGNGISSN-----QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
F ++ +S + V VD+ F GQ+ STV C CGH S ++PF+ LSLP
Sbjct: 462 FENSDNNDAQAQMSWDTHLMRNNSVVVDH-FHGQLKSTVVCQHCGHVSLTFDPFVFLSLP 520
Query: 386 VPTK 389
VP+K
Sbjct: 521 VPSK 524
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPY---MDPGCTDHD 969
A KR+ + K PP+L +HLKRF R K+ V+F ++L PY +DP
Sbjct: 825 AQKRIDVWKCPPVLIVHLKRFQYTHVFR-DKVGTKVDFPVTGLDLSPYVNQLDPAKPP-- 881
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
Y L V H+G++ GHY A+ + PK K W+ SD V +V EE
Sbjct: 882 --IYDLYAVSNHIGSLGSGHYTAFTK-NPKTK----------TWFKMSDSTVVKVEKEEN 928
Query: 1030 LRCEAYILFYEK 1041
+ E+ F+E+
Sbjct: 929 VITES-AAFHEQ 939
>gi|167515636|ref|XP_001742159.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778783|gb|EDQ92397.1| predicted protein [Monosiga brevicollis MX1]
Length = 828
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 88/167 (52%), Gaps = 16/167 (9%)
Query: 891 GNCESEESKVEEINSK-IVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV 949
G C S K SK I V R+A+K++LI P +LT+HLKRF Q RLSK + HV
Sbjct: 662 GTCSSPSMKSTPSPSKPIPPVAREASKQLLIELPPTVLTLHLKRFEQHGT-RLSKSSRHV 720
Query: 950 NFSEIINLRPYMDPGCT------DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVK 1003
+F ++++ P+ C+ Y L VV H G + GGHYVAYVR + K
Sbjct: 721 SFPLVLDIAPFCSTECSMTVYSGKECGVRYELRSVVVHQGRLTGGHYVAYVRTDMEASTK 780
Query: 1004 AKKESVG--------GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+ G WY SD VR+V+ +EVL EAYILFYE++
Sbjct: 781 DTAAAQGPSQTSGSPSSWYCVSDASVRKVAEKEVLAAEAYILFYERL 827
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 23/80 (28%)
Query: 290 NPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGP 349
+P+ F I KAP+F+GYQQ DS ELLR LLD + E+
Sbjct: 159 DPKPLFNAIVMKAPRFRGYQQQDSQELLRHLLDLMDDEDRT------------------- 199
Query: 350 VFVDYVFGGQIASTVRCVEC 369
VFGG++AST+ C C
Sbjct: 200 ----AVFGGKLASTIICHGC 215
>gi|340728779|ref|XP_003402692.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like [Bombus
terrestris]
Length = 918
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 163/407 (40%), Gaps = 104/407 (25%)
Query: 50 CPHLDKGIDSDKISV---KIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA 106
CPH+ K ++ +KI K+G S + C C KK K K V + A
Sbjct: 33 CPHIPKAVNFNKIKKCVNKVGIS--LECSIC---------KKCKNNSSKLNEKECVTNSA 81
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQ---WENPHLRWCFPCNTL 160
+ +CL CG+ CG H + H ++ H +V++ W WCF C T
Sbjct: 82 VLICLQCGYQGCGREEC-----GHALEHYKKPHSDCHVMVVESLYWS----VWCFQCETK 132
Query: 161 IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSD 220
I N + L E V+ IK S SS+ + + ++ + E+ ++ D
Sbjct: 133 I-------NIGCRKKLQETVEFIKRSSIVRSSLQTKASM-------TQYQKETVDINKVD 178
Query: 221 LDGNACYV--VRGLANLGNTCFFNSVMQNLLAMSQL-----------QDYFL-------- 259
+ + V GL NLGNTCFFN+V+Q L L Q + L
Sbjct: 179 KEKGLYNLPKVGGLMNLGNTCFFNAVLQCLAQTPFLVKVLDDLRLPGQKFILPGGKHKFA 238
Query: 260 -NAELT-----------FGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKG 307
N+E +G T L K E + T R P K Q
Sbjct: 239 NNSEEVDLPPIEGILEGWGSFTSILCKTLTEMQ-NTDERQSYRPSELLNSFKKKTTQCMD 297
Query: 308 YQQHDSHELLRCLLDGLCSE-----------ELAFRKRNSPS------------EGNGIS 344
QHDSHELLR LL+ + +E E+ ++ +P GN S
Sbjct: 298 GGQHDSHELLRHLLEIVRNEDLRRYQSIILKEVGLNEKTNPEGVEENLKSRVKFYGNQAS 357
Query: 345 SNQ-GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
S GP + VF G + ST+ C++C HSS EPFLDLSLPV K
Sbjct: 358 SRLLGP---ELVFRGVLVSTLECLDCHHSSQSTEPFLDLSLPVMADK 401
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 103/217 (47%), Gaps = 46/217 (21%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINK 922
EG CS+ + ++A ++ +++ C + E KV+ N K++ +TK+ LI++
Sbjct: 710 EGECSIQSCLNQ-FTALELMSGSNKVSCEACTARERKVKP-NCKMICTP--STKQYLISR 765
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-YRLVGVVEH 981
P +L HLKRF Q R K+ HV+F +++L P C +H Y L GVVEH
Sbjct: 766 VPAVLIFHLKRF-QAQRVDFRKVTRHVSFPILLDLAPI----CKNHKKARIYALYGVVEH 820
Query: 982 LGTMRGGHYVAYVRGG-------------PKNKVKAKKESVG------------------ 1010
GT+ GGHYVAYV+ P VK +ES
Sbjct: 821 SGTIHGGHYVAYVKSRLALTSDDPRWSFLPPKDVKDLQESSYSSSSESETEEAAAAPSST 880
Query: 1011 -----GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WYH SD V EV VL+ +AY+LFYE+I
Sbjct: 881 VRPPPGKWYHVSDSRVTEVDETTVLQRQAYLLFYERI 917
>gi|222616349|gb|EEE52481.1| hypothetical protein OsJ_34660 [Oryza sativa Japonica Group]
Length = 1609
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K++R AT + INKAPP+LTI LKRF K+ HV F E +++ YMD D+
Sbjct: 1455 KIRRVATIKYRINKAPPVLTIQLKRFEFVHDDGSGKIEEHVIFQETLDITKYMDTRYLDN 1514
Query: 969 DNYDYRLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y Y LV V+ H G + GGHY AYVR + + ++ S W+ A+D V EV E
Sbjct: 1515 E-YKYCLVAVIVHGGQKLDGGHYFAYVRAS-RTGGQKRESSDTHSWFLANDEKVEEVLFE 1572
Query: 1028 EVLRCEAYILFYEKI 1042
VL+CEAYILFYE++
Sbjct: 1573 NVLKCEAYILFYERV 1587
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 228 VVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFG-PLTIALKKLFAETKPETGLR 286
VVR + N+GN C+FN+V+Q+LLA+S+L+ L + G L + LKKLF +T
Sbjct: 1211 VVRKMQNIGNRCYFNAVLQSLLALSELRSRMLEQDPPPGRALHLELKKLFVDTINYK--E 1268
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
+ + F +CS+ DS+ L LL+ L +EE EG
Sbjct: 1269 STLETEKLFQLMCSRHEDINQGDMGDSNHALHSLLNDLINEE---------PEGMHF--- 1316
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
P V +F GQ+ +V ++C H S E + LSL +P+ K S K
Sbjct: 1317 --PSTVKSLFNGQVVKSVSSIQCAHHSITTEALV-LSLAIPSNKPVSMK 1362
>gi|108864585|gb|ABA94767.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2446
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K++R AT + INKAPP+LTI LKRF K+ HV F E +++ YMD D+
Sbjct: 2292 KIRRVATIKYRINKAPPVLTIQLKRFEFVHDDGSGKIEEHVIFQETLDITKYMDTRYLDN 2351
Query: 969 DNYDYRLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y Y LV V+ H G + GGHY AYVR + + ++ S W+ A+D V EV E
Sbjct: 2352 E-YKYCLVAVIVHGGQKLDGGHYFAYVRAS-RTGGQKRESSDTHSWFLANDEKVEEVLFE 2409
Query: 1028 EVLRCEAYILFYEKI 1042
VL+CEAYILFYE++
Sbjct: 2410 NVLKCEAYILFYERV 2424
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 228 VVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFG-PLTIALKKLFAETKPETGLR 286
VVR + N+GN C+FN+V+Q+LLA+S+L+ L + G L + LKKLF +T
Sbjct: 2048 VVRKMQNIGNRCYFNAVLQSLLALSELRSRMLEQDPPPGRALHLELKKLFVDTINYK--E 2105
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
+ + F +CS+ DS+ L LL+ L +EE EG S
Sbjct: 2106 STLETEKLFQLMCSRHEDINQGDMGDSNHALHSLLNDLINEE---------PEGMHFPST 2156
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
V +F GQ+ +V ++C H S E L LSL +P+ K S K
Sbjct: 2157 -----VKSLFNGQVVKSVSSIQCAHHSITTEA-LVLSLAIPSNKPVSMK 2199
>gi|198429717|ref|XP_002128614.1| PREDICTED: similar to ubiquitin specific protease 16 [Ciona
intestinalis]
Length = 640
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 99/212 (46%), Gaps = 59/212 (27%)
Query: 231 GLANLGNTCFFNSVMQNL-----------LAMSQLQD---------------YFLNAELT 264
GL NLGNTCFFNSV+Q+L L + Q D Y L+
Sbjct: 60 GLHNLGNTCFFNSVLQSLSQTPVLSTVVKLHIKQTLDKIEQEVSTSSQPTLKYTLDK--- 116
Query: 265 FGPLTIALKKLFAETKPETGLRNV---------INPRSFFGCICSKAPQFKGYQQHDSHE 315
GP+T A F K + + I+P++ F +C+K +F+GYQQ DS E
Sbjct: 117 LGPMTTAFSNFFDGIKVSNTMSTLNKRPTRTKSISPKNLFNQLCNKNAKFRGYQQQDSQE 176
Query: 316 LLRCLLDGLCSEELAFRK---------RNSPSE-----------GNGIS-SNQGPVFVDY 354
CLL+ L EE+ RK NS ++ G G+ + + P FV+
Sbjct: 177 FFHCLLESLKQEEIKQRKGGILHALGLYNSKAKDVSDDELKKVRGYGVQITEKTPTFVES 236
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
VFGG++ S V+C EC + V E F+D+SLPV
Sbjct: 237 VFGGKLISCVQCDECKMVTKVTESFVDISLPV 268
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 17/146 (11%)
Query: 913 DATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD 972
+A+K++LI K P IL +HLKRF Q A L K+N V +++L P+ C + + +
Sbjct: 495 NASKQMLIKKPPVILAVHLKRFQQ-AGFNLRKVNKKVEIPIVLDLSPFSTVDCQVYADSE 553
Query: 973 ----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAK---KESV---------GGVWYHA 1016
Y L +VEH G++ GHY AYV+ P N K KE + GVWYH
Sbjct: 554 SRLTYELYAIVEHSGSLSRGHYTAYVKLKPTNDNLIKFINKEDIMPDKDTEPSKGVWYHT 613
Query: 1017 SDVYVREVSLEEVLRCEAYILFYEKI 1042
SD V + + + L C AY+LFYE+I
Sbjct: 614 SDTNVSKTTQAKALNCNAYMLFYERI 639
>gi|242004018|ref|XP_002422942.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212505846|gb|EEB10204.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1190
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 172/431 (39%), Gaps = 93/431 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSD-PIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSK-AI 107
CPH I + + P+ C C KGK S + + A+
Sbjct: 33 CPHAKNAIHLPGVKKALKPDGFPLTCNGC-----------AKGKTNSNSTSEVENENWAL 81
Query: 108 WVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQ---WENPHLRWCFPCNTLIPVE 164
+CL CGH CG G Q + R + H L + W WC+ C+ IP
Sbjct: 82 LMCLKCGHCGCGS-GSKHAEQHSINR--KSDVHDLALNLTIWT----VWCYKCDVEIPSN 134
Query: 165 KTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLD-- 222
+++ E V K++ S + + VE +VN + S V GSD
Sbjct: 135 ASKKLLE---CYEFVKKILASNSMDSRTPPVERFVEEKPSVNFSL---SRPVKGSDSAVY 188
Query: 223 --GNACYV------------VRGLANLGNTCFFNSVMQNL----LAMSQLQDY------- 257
G YV RGL NLGNTCFFN+V+Q L +S L++
Sbjct: 189 PPGFESYVPQHNSFLDSLPKARGLCNLGNTCFFNAVLQCLSQTPFLLSILEEMKEEGEKF 248
Query: 258 -FLNAELTFG-------PLTIALK------KLFAETKPE--TGLRNVINPRSFFGCICSK 301
E+ FG PL LK ++ A+T E +G V PR + K
Sbjct: 249 KLPGGEINFGEEKETLEPLEGVLKGWGQVTQILADTLFEIQSGKSEVFQPRKLLCQLHLK 308
Query: 302 APQFKGYQQHDSHELLRCLLDGLCSEELAFRKR--------NSPSEGNGIS--------- 344
PQF G+ QHDSHELLR LL+ + +E+L K + SE + I+
Sbjct: 309 CPQFVGFGQHDSHELLRQLLEIVRTEDLQRYKHAILETLNLDKKSERDNITDELRRKVKA 368
Query: 345 ----SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
+N+ + + VF G + ST+ C EC + S E FLDLSLPV K +++
Sbjct: 369 YGKQANELLLRPEQVFRGFLVSTLECQECHNRSDHVESFLDLSLPVMADKPVHIRSKSYD 428
Query: 401 RAKKTKLPPKK 411
PP K
Sbjct: 429 DGGDINSPPSK 439
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 64/162 (39%), Gaps = 42/162 (25%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V + +K++L+ P +L +HLKRF Q R K V F I++L PY C +
Sbjct: 763 VLTNTSKQLLVCSPPAVLILHLKRF-QVLRCTFKKKCREVKFPMILDLAPYCSTKCKNGS 821
Query: 968 -----HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK--------------------- 1001
+ Y L GVVEH+GT GHYVAY++ P K
Sbjct: 822 TIKKNQNEILYSLYGVVEHMGTFHRGHYVAYIKIRPPMKPDDPRWSFLPKGAHGNLAAQI 881
Query: 1002 -------------VKAKKESVGGVWYHASDVYVREVSLEEVL 1030
V K G WY+ SD EV E VL
Sbjct: 882 KNNYLDHSHQNGAVGGKLSPPPGKWYYVSDSCTSEVDEENVL 923
>gi|26331802|dbj|BAC29631.1| unnamed protein product [Mus musculus]
Length = 260
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 109/217 (50%), Gaps = 33/217 (15%)
Query: 851 DSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK- 909
+ SQ +T E CSV +++ ++ +++L+ +C + K + S K
Sbjct: 51 QTLSQSYVTTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCEDCTEKRRKCHKETSSAEKK 107
Query: 910 ---VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT 966
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C
Sbjct: 108 AGGVYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCAATCK 166
Query: 967 D---HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKES--------------- 1008
+ + Y L G+VEH G+MRGGHY AYV K +V ++K S
Sbjct: 167 NISVGEKVLYGLYGIVEHSGSMRGGHYTAYV----KVRVPSRKLSECITGRKTAAGLKEP 222
Query: 1009 ---VGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+GG W H SD YV+ V L +AY+LFYE+I
Sbjct: 223 DGELGGHWVHVSDTYVQVVPESRALSAQAYLLFYERI 259
>gi|395851460|ref|XP_003804059.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
45-like [Otolemur garnettii]
Length = 810
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KIVK 909
SQ +T E CSV +++ ++ +++L+ NC ++ K ++ S K
Sbjct: 604 SQSYVTTSKE--CSVQSCLYQ-FTSMELLIGNNKLLCENCTEKKQKYQKETSSAERKAEG 660
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH- 968
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 661 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKNAN 719
Query: 969 --DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNK----VKAKKESVG---------GV 1012
+ Y L G+VEH G+MRGGHY AYV+ P K + KK G G
Sbjct: 720 VGEKVLYGLYGIVEHTGSMRGGHYTAYVKVRTPSRKLLEHITGKKNVFGLKEPGTESAGH 779
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD V+ V L +AY+LFYE++
Sbjct: 780 WVHVSDASVQVVPESRALGAQAYLLFYERL 809
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 147/338 (43%), Gaps = 65/338 (19%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV 163
IW+CL CG CG ++ H ++H+R +R H +VI + WC+ CN
Sbjct: 82 IWLCLKCGFQGCG----ESSESQHSLKHSRSSRTEPHCIVISLST-WIIWCYECN----- 131
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
EK + NK L+++V ++ ++ + + G EI GS L
Sbjct: 132 EKLSTHC-NKKVLAQIVDFLQKHVSK-TQTNTFSKIMKVGEGKCEIDKIKRGRKGSCLPS 189
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNA 261
V+G+ NLGNTCFFN++MQNL L++ L
Sbjct: 190 -----VKGITNLGNTCFFNAIMQNLAHTYILKELMNEIKENNTKLKIFPPSDSQLDPLVV 244
Query: 262 ELTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS----HEL 316
EL+ GPLT AL LF + ETG + ++P F +C K Q H +E
Sbjct: 245 ELSSPGPLTSAL-FLFLHSM-ETG-KGPLSPTVLFNQLCQKXVHL-CLQYHGKPKAPNEG 300
Query: 317 LRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTVR 365
R +D + + N+P+ + V F+D +F G++ STV
Sbjct: 301 KRGSVDRRIQVSI-LKAFNNPTTKTADDETRKKVKAYGKEGMKMNFIDRIFIGELTSTVM 359
Query: 366 CVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAK 403
C EC + STV +PF+D+SLP+ ++A K P R +
Sbjct: 360 CEECANISTVKDPFIDISLPIIEERA--SKPLPLGRMR 395
>gi|383858952|ref|XP_003704963.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Megachile
rotundata]
Length = 910
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 159/402 (39%), Gaps = 99/402 (24%)
Query: 50 CPHLDKGIDSDKIS---VKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA 106
CPH+ K + +KI +K G S I C C KK K K S
Sbjct: 33 CPHIGKAVSFNKIKKYIIKTGMS--IECATC---------KKNTSNSIKSKEEECAISSG 81
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV 163
I +CL CGH CG H + H + H L ++ + +L WCF C
Sbjct: 82 ILICLQCGHQGCGKEQC-----GHALEHYKTPHSDCHSLAVETVHWNL-WCFEC------ 129
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
+ E N + L E + +K +T ++S + ++++ E+ V + +
Sbjct: 130 -EIEVNIGCRKKLQETIDFVKRAATAMNSPSQNKV------IQNQLQKETVNVDKNQKEQ 182
Query: 224 NACYV--VRGLANLGNTCFFNSVMQNL----LAMSQLQDYFL-----------------N 260
+ V GL NLGNTCFFN+V+Q L + L+D L +
Sbjct: 183 ILYNLPKVGGLMNLGNTCFFNAVLQCLAQTPFLVKVLEDLRLPGQKFVLPGGKHKPANSS 242
Query: 261 AELTFGPL------------TIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGY 308
E+ P+ T L K E + G R P K Q
Sbjct: 243 EEIELPPIEGTLEGWQNCSFTSILCKTLTEMQNSDG-RQAYRPSELLNSFKKKTMQCMDG 301
Query: 309 QQHDSHELLRCLLDGLCSE-----------ELAFRKRNSPS------------EGNGISS 345
QHDSHELLR LL+ + +E E+ ++ +P GN S+
Sbjct: 302 GQHDSHELLRHLLEIVRNEDLRRYQSIILKEVGLNEKTNPEGVEDSLKSRVKFYGNQASA 361
Query: 346 NQ-GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
GP + VF G + STV C++C H+S EPFLDLSLPV
Sbjct: 362 RLLGP---ELVFRGVLVSTVECLDCHHTSQSMEPFLDLSLPV 400
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 46/217 (21%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINK 922
EG C + ++A ++ +++ C + E KV+ + K+V +TK+ LI++
Sbjct: 702 EGECLIQSCLKQ-FAALELMSGSNKVGCEACTAREKKVKG-DCKMVCTP--STKQYLISR 757
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDN-YDYRLVGVVEH 981
P +L +HLKRF Q R K+ HV+F +++L P C +H Y L GVVEH
Sbjct: 758 VPAVLILHLKRF-QAQRIDFRKVTRHVSFPTLLDLSPI----CKNHKKPRIYALYGVVEH 812
Query: 982 LGTMRGGHYVAYVRGG--------------PKNKVKAKK--------------------- 1006
GT+ GGHYVAYV+ PK+ ++
Sbjct: 813 SGTIHGGHYVAYVKSRLPLKPDDPRWSFLPPKDPQDMQENSYSSSSDSKTEETTSTLPTI 872
Query: 1007 -ESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
E G WY+ SD V EV VL+ +AY+LFYE+I
Sbjct: 873 IEPPPGKWYYVSDSRVSEVDETTVLQSQAYLLFYERI 909
>gi|302678483|ref|XP_003028924.1| hypothetical protein SCHCODRAFT_258192 [Schizophyllum commune H4-8]
gi|300102613|gb|EFI94021.1| hypothetical protein SCHCODRAFT_258192 [Schizophyllum commune H4-8]
Length = 1135
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 163/397 (41%), Gaps = 85/397 (21%)
Query: 709 VESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQNDI 768
VE CL F E+L +N C C K + +R K +P G + + +
Sbjct: 761 VEECLRAFTAVEVLDGENMVGCRRCWKIAN-----GVYKRPKTGDEPQ-EGEDADDTDSA 814
Query: 769 QGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQ-----------DCAEV-ES 816
+G+S T D A+T ++ + + + G + D E+ E
Sbjct: 815 EGASPTAPDDAMRDLAETLRSQSSPVFTPLDEDGSMTSISSRAAASAPDSAVDLTEIEEQ 874
Query: 817 GLTNDVN-PAVP-------QREKGKMKINDAVEM------QSRSSCLRDSCSQESITDQ- 861
L++D P+VP + + G+ ++ A +SR S Q +D
Sbjct: 875 PLSHDKPLPSVPTISMTAAEGDNGEKRVAAAGTYPGSPPPESRDSLTIPRRQQRPRSDAD 934
Query: 862 ----DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKR 917
DE S +T SG + + + S VA + + + V R A KR
Sbjct: 935 GASGDESDGSAQSSTYSGDTDDSIQPHPSNAVAKKKKPKPT-----------VLRPAYKR 983
Query: 918 VLINKAPPILTIHLKRFSQDARGR-------LSKLNGHVNFSEIINLRPYMDP------- 963
LI PP+L IHLKRF Q ++ KL +V F E ++L+PY+ P
Sbjct: 984 YLIAAPPPVLVIHLKRFQQISKTSFVSFSSGFKKLEDYVAFPEWLDLKPYLAPTKEECAM 1043
Query: 964 ---GCTDHDNYD----YRLVGVVEHLGTMRGGHYVAYVRGGPK-----------NKVKAK 1005
+H YRL VV H+G+M GGHY+AY P+ KV K
Sbjct: 1044 GKKASAEHARKSEPCMYRLYAVVVHIGSMLGGHYIAYTALPPREDEPMQETEDGKKVPPK 1103
Query: 1006 KESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
++ W + SD +VR ++EEVL+ +AYI YE++
Sbjct: 1104 RQ-----WAYISDTFVRLTTIEEVLKAKAYICMYERV 1135
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 82/218 (37%), Gaps = 67/218 (30%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKK-----LFAETKPETG- 284
GL N GNTCF NSV+Q L+A L D F P++ A+++ L ++ PE
Sbjct: 190 GLINHGNTCFMNSVLQGLIATRLLSDL-----AQFTPISPAVQRHSRIRLLSQRSPELTN 244
Query: 285 ------------------------------------LRNVINPRSFFGCICSKAPQFKGY 308
R ++P+S + K Q+ +
Sbjct: 245 AHSQAGEYEREWVDMMPIGDVFIDTMYKAWDNQKNLKRENMSPKSLLHAVGKKYDQYLDF 304
Query: 309 QQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQ--------GPV---------- 350
Q D+HE LR LLD + EE K P N + P
Sbjct: 305 AQQDAHEFLRILLDAMRMEEFDVIKARQPPPANAHKKRKRRRTELGVTPTTPQEEDDTKL 364
Query: 351 --FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
F D +F G++ S + C +C H S YE F DLSL +
Sbjct: 365 VSFTDMIFAGRLTSVLVCQKCKHVSQTYEDFNDLSLSI 402
>gi|326436501|gb|EGD82071.1| hypothetical protein PTSG_02752 [Salpingoeca sp. ATCC 50818]
Length = 1058
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 80/144 (55%), Gaps = 17/144 (11%)
Query: 905 SKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPG 964
S+ + ++ATKR LI K P +LTI LKRF R RL K + V+F +++L P+
Sbjct: 925 SRAHRTLQEATKRYLIEKPPEVLTIQLKRFESAGR-RLQKTDKFVSFPLVLDLAPFCTSN 983
Query: 965 C-----TDHDNYDYRLVGVVEHLGTMRGGHYVAYV-RGGPKNKVKAKKESVGGVWYHASD 1018
C +D Y L+ VV H G MRGGHY+AYV RGG N W+ SD
Sbjct: 984 CAVTVYSDGAGIRYELMTVVVHQGGMRGGHYIAYVKRGGVDNH----------RWFVCSD 1033
Query: 1019 VYVREVSLEEVLRCEAYILFYEKI 1042
VR VS +EV +AY+LFY+++
Sbjct: 1034 RSVRAVSSKEVFSAQAYLLFYQRL 1057
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 97/225 (43%), Gaps = 59/225 (26%)
Query: 231 GLANLGNTCFFNSVMQNLLAM---SQLQDYFLNAELTF---------------------- 265
GLANLGNTCF N+V+Q L ++ ++ D L +
Sbjct: 22 GLANLGNTCFLNTVLQGLASLRDTTEPLDKLLATDRAIRVIVPTSRAVYKSKEVAMKAIE 81
Query: 266 --------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
P++ AL + + + + ++ PR F I KAPQF+GY+Q D+ ELL
Sbjct: 82 VIVQNDSPSPISHALLHVLRDLQSPKPI--IVQPRGLFNSISQKAPQFRGYRQQDAQELL 139
Query: 318 RCLLDGLCSEELAFRKRN-----------------------SPSEGNGISSNQGPVFVDY 354
R LLD + EEL +R + +E + S FV
Sbjct: 140 RVLLDCVEQEELQRVQRAIFERFEVEHDDKDFPDVLKDVDPALAERLRVYSRSAETFVQR 199
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP-TKKAPSKKTQP 398
+FGG+ ST+ C C S EPFLD++L + T +APS + P
Sbjct: 200 MFGGRFGSTIVCQHCKTVSRTSEPFLDVALSITDTTRAPSTLSLP 244
>gi|347964243|ref|XP_311192.5| AGAP000666-PA [Anopheles gambiae str. PEST]
gi|333467440|gb|EAA06876.5| AGAP000666-PA [Anopheles gambiae str. PEST]
Length = 990
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 177/459 (38%), Gaps = 118/459 (25%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGK--KKGSSLVDSKAI 107
C H+ K ID + I +I S++ C + +++ +G + K + + ++
Sbjct: 36 CTHIQKSIDLNTIRKQIKSNEEWCRRTCSKCADEQQAARGGSYVNEPLKTPNDVNGDTSL 95
Query: 108 WVCLGCGHYACGGVGLPTTPQSHVVRH---ARQTRHPLVIQWENPHLRWCFPCNTLIPVE 164
W CL CG CG H ++H R H L I + WC+ C+ +PV+
Sbjct: 96 WFCLKCGTQLCG-----RNKNQHALQHYATPRSDMHALAINTTTLDV-WCYTCS--VPVD 147
Query: 165 ------------------------KTEENGENKDALSEVVKLIKG--RSTEISSVDVEDA 198
+ + ++A V L+ +ST SS DV DA
Sbjct: 148 PYAKPKLLDIVEFVKREIAKVRAAAAHTDAQIQNATESVRNLVLDALQSTTNSSFDVPDA 207
Query: 199 W-FGSGNVNSEIKSEST--------------VVSGSDLDGNACYVVRGLANLGNTCFFNS 243
F S + E + V + +A VRGL+NLGNTCFFN+
Sbjct: 208 AKFNSSDQTYEQSARGKGPEAAGPAASSSSLVPHATKSLIDALPRVRGLSNLGNTCFFNA 267
Query: 244 VMQNLLAMSQLQDYFLNA--------------------ELTFGP----------LTIALK 273
V+Q L L D + E+ P LT AL
Sbjct: 268 VLQCLARTPYLSDILKQSATEGEKVHIPGGTIKLPDGTEILAPPIDGVLDNWRSLTEALT 327
Query: 274 KLFAETK---PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG------- 323
+L + + PET ++P + SK PQF G QHDSHELLR LL+
Sbjct: 328 ELLTDLQANAPET-----LSPNRLLQELTSKWPQFDGGDQHDSHELLRHLLESVRTDDLR 382
Query: 324 ----LCSEELAFRKRNSPSEGNGISSNQGPVF----------VDYVFGGQIASTVRCVEC 369
L ++L R S +G + + VF G + ST+ C +C
Sbjct: 383 RYQSLILQKLGLESRKSRQNTDGTQRALAKYYNEQISQWVFRPEQVFRGSLVSTLTCQDC 442
Query: 370 GHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLP 408
H+S+ +E FLD+SLPV +K QP R + + P
Sbjct: 443 HHTSSQHEYFLDISLPVCVEKP-----QPPVRRRSSPEP 476
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
Query: 897 ESKVEEINSKI-VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEII 955
E+ E IN K V +ATK+ LI++ P +L +HLKRF R KLN V+F ++
Sbjct: 750 EACTERINGKGGPSVNTNATKQFLISQPPAVLILHLKRFQVGLRSVFKKLNKLVSFPFVL 809
Query: 956 NLRPY----------MDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP 998
++ P+ + PG Y L G+VEH G+M GGHYVAYV+ P
Sbjct: 810 DIAPFCGSKVKRASHIRPG---QKKILYALYGLVEHSGSMHGGHYVAYVKVRP 859
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 1007 ESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
E+ G WY SD YVREV+ E VL+ +AY+LFYE+I
Sbjct: 954 ETPPGKWYCVSDSYVREVTEESVLKVQAYLLFYERI 989
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 147/344 (42%), Gaps = 61/344 (17%)
Query: 90 KGKHGKKKGSSLV----DSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQ 145
K HG+ S + +K W+CL CG CG H +H + +H I
Sbjct: 19 KKSHGESTSSWVCAVCRSNKNPWMCLACGVVLCG-----RYVNGHAKKHYEENQHSASIN 73
Query: 146 WENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNV 205
EN + +C+ C +++ N D +E +K ++ ++ E
Sbjct: 74 CENLAV-YCYVC---------DDHALN-DNKTETIKHVRQFLQAKVNLQYE--------- 113
Query: 206 NSEIKSESTVVSGSDLDG--------NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDY 257
++K+ + V+G +DG N + GL NLGNTCF N+V+Q+L ++Q Y
Sbjct: 114 -KQLKTLTGDVAGDHIDGPPRKKLAANTRANIPGLRNLGNTCFMNAVLQSLSNINQFCGY 172
Query: 258 F-------LNAELTFGPLTIALKKL------FAETKPET------GLRNVINPRSFFGCI 298
F L + T G + + E +T G + I+P S F +
Sbjct: 173 FKDLPAVELRSGKTAGKRIYNTRNMKHDDVSLVEEIRKTLCALWQGDQTAISPDSLFTVM 232
Query: 299 CSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGG 358
P+F+GYQQ D+HE +R LLD L +E +P + +N V +FGG
Sbjct: 233 WKIFPRFRGYQQQDAHEFMRYLLDRLHTELQGSTWPTTPKK----QTNGHATIVSVIFGG 288
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRA 402
+ S V C CG +PFLD+SL +P + P K + S+
Sbjct: 289 LLLSEVTCRPCGSLYKKIDPFLDVSLDIPERFRPRSKNKDGSQV 332
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 19/134 (14%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-SEIINLRPYM-DPGCTDH 968
++ +TK+ + P +L IHLKRF+ R +K++ +V F + ++++P+M P C D
Sbjct: 362 RQPSTKKFWLKAIPNVLCIHLKRFTWSGFLR-TKIDTYVQFPMKGLDIQPFMLGPECQDE 420
Query: 969 D--NYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
+ Y L V+ H G+ G GHY+A+ G WY +D V V
Sbjct: 421 NVSTTVYDLAAVIVHQGSGAGAGHYIAFAVNN-------------GQWYCFNDSTVTPVE 467
Query: 1026 LEEVLRCEAYILFY 1039
+ + RC+AYILFY
Sbjct: 468 EKVITRCKAYILFY 481
>gi|409081365|gb|EKM81724.1| hypothetical protein AGABI1DRAFT_118809 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1253
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 95/197 (48%), Gaps = 46/197 (23%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------------------TFGPLTIAL 272
GL+N+GNTCF NS +Q L+ +L DYFL+ FG L L
Sbjct: 346 GLSNMGNTCFMNSALQCLVHTKELSDYFLSGVFEDELNADNPLGMGGAIAEAFGSL---L 402
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEEL--- 329
+++A++ P T +PR F + APQF GYQQHDS EL+ LLDGL E+L
Sbjct: 403 HRIWADSGPSTS----YSPREFKQVLQKFAPQFSGYQQHDSQELVAFLLDGL-HEDLNRI 457
Query: 330 ----AFRKRNSPSEGN------------GISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
K + GN G V VD +F GQ ST+ C ECG S
Sbjct: 458 LKKPYVEKPDWEGGGNLELVQLAKKSWDGYLLRNDSVIVD-LFQGQYQSTLVCPECGKVS 516
Query: 374 TVYEPFLDLSLPVPTKK 390
++PF+ L+LP+P +K
Sbjct: 517 ITFDPFMYLTLPIPAEK 533
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 37/175 (21%)
Query: 892 NCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+C E +K EE+ + K + ATKR + KAP +L +HLKRFS ++R K+
Sbjct: 874 DCLDEFTKEEELGEDDLWYCPQCKKHQQATKRFDLWKAPDVLVVHLKRFS-NSRTLRDKI 932
Query: 946 NGHVNFS-EIINLRPYM-----------------DPGCTDHDN-YDYRLVGVVEHLGTMR 986
+ ++F + +NL + + T+ D Y L GV EH+G +
Sbjct: 933 DAFIDFPIQDLNLEDMVRERRVAKALQAEGVNIEELNLTNLDEPLIYDLFGVDEHMGGLG 992
Query: 987 GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
GGHY AYV A +E WYH D +VR E+ + +AY+LFY +
Sbjct: 993 GGHYRAYVLN------HANEE-----WYHFDDSFVRPAKAEDAVNADAYLLFYRR 1036
>gi|409040949|gb|EKM50435.1| hypothetical protein PHACADRAFT_129620 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1312
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 90/199 (45%), Gaps = 50/199 (25%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------------------TFGPLTIAL 272
GL N+GNTCF NS +Q L+ +L DYFL FG L L
Sbjct: 410 GLGNMGNTCFMNSAIQCLVHTPELADYFLTGVFEKELNPDNPLGMHGQIAQAFGAL---L 466
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE----- 327
+K++A T T +PR F + APQF GYQQHDS EL+ LLDGL +
Sbjct: 467 RKIWAPTSSATSY----SPREFKAVLSKFAPQFSGYQQHDSQELVAFLLDGLHEDLNRII 522
Query: 328 ----------------ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGH 371
EL R S +G V VD +F GQ ST+ C EC
Sbjct: 523 KKPYVEKPDWEGGGDKELVSLARES---WDGYLKRNDSVIVD-LFQGQYQSTLVCPECEK 578
Query: 372 SSTVYEPFLDLSLPVPTKK 390
S ++PF+ L+LP+P +K
Sbjct: 579 VSITFDPFMYLTLPLPVQK 597
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 31/152 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK + P +L +HLKRFS ++R K++ V+F + ++ R
Sbjct: 965 KKHQQATKSFDLWSVPDVLVVHLKRFS-NSRILRDKIDTFVDFPLSGLDLTSMVGQRKVA 1023
Query: 962 --------DPGCTDHDNYD----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESV 1009
DP D+ D Y L V EHLG + GGHY AY S
Sbjct: 1024 SRLVEKGEDPKELGLDDIDEPLVYDLFAVDEHLGGLGGGHYRAYALN-----------SA 1072
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
W+H D YV E + AY+LFY +
Sbjct: 1073 DQQWHHFDDSYVSPARPEAAVNQNAYLLFYRR 1104
>gi|125535131|gb|EAY81679.1| hypothetical protein OsI_36850 [Oryza sativa Indica Group]
Length = 1307
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 81/139 (58%), Gaps = 11/139 (7%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K++R AT + INKAPP+LTI LKRF K+ HV F E +++ YMD D+
Sbjct: 1153 KIRRVATIKYRINKAPPVLTIQLKRFEFVHDDGSGKIEEHVIFQETLDITKYMDTRYLDN 1212
Query: 969 DNYDYRLVGVVEHLG-TMRGGHYVAYVR----GGPKNKVKAKKESVGGVWYHASDVYVRE 1023
+ Y Y LV V+ H G + GHY AYVR GG K ++ S W+ A+D V E
Sbjct: 1213 E-YKYCLVAVIVHGGQKLDDGHYFAYVRASRTGGQK-----RESSDTHSWFLANDEKVEE 1266
Query: 1024 VSLEEVLRCEAYILFYEKI 1042
V E VL+CEAYILFYE++
Sbjct: 1267 VLFENVLKCEAYILFYERV 1285
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 228 VVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFG-PLTIALKKLFAETKPETGLR 286
VVR + N+GN C+FN+V+Q+LLA+S+L+ L + G L + LKKLF +T
Sbjct: 909 VVRKMQNIGNRCYFNAVLQSLLALSELRSRMLEQDPPPGRALHLELKKLFVDTINYK--E 966
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
+ + F +CS+ DS+ L LL+ L +EE EG
Sbjct: 967 STLETEKLFQLMCSRHEDINQGDMGDSNHALHSLLNDLINEE---------PEGMHF--- 1014
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
P V +F GQ+ +V ++CGH S E L LSL +P+ K S K
Sbjct: 1015 --PSTVKSLFNGQVVKSVSSIQCGHHSITTEA-LVLSLAIPSNKPVSMK 1060
>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
magnipapillata]
Length = 503
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 137/322 (42%), Gaps = 52/322 (16%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQ-TRHPLVIQWENPHLRWCFPCNTLIP 162
+K+ W+CL CG CG H H+ H + I + + +C+ C+ I
Sbjct: 36 NKSPWMCLKCGEVLCGRY-----VNGHAKMHSESCASHNVCI--DASLMVFCYKCDDFI- 87
Query: 163 VEKTEENGEN--KDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSD 220
+ T N + AL + I+ R S+D + + S +K + S +
Sbjct: 88 INDTSTGDINLIRTALQNEIPRIQKRKRR-QSIDQQLS------KESPMKKLNRSPSKEN 140
Query: 221 LDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN---AELTFGPLTIALKKLFA 277
GN V GL NLGNTCF N+++Q+L + YF EL + KK +
Sbjct: 141 KAGNNVRTV-GLRNLGNTCFMNAILQSLSNLKYFSGYFKELPAIELNVKNMDEQTKKYYT 199
Query: 278 ETKP------------------ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
+ + G I+P S F + P+F+GYQQHD+HE + C
Sbjct: 200 RSYQSDDISLVEELRKVLCALWQQGSNTAISPESLFTVVWKVVPRFRGYQQHDAHEFMHC 259
Query: 320 LLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
LLD + +E L ++ +N + +FGGQ+ S V C+ CG S E +
Sbjct: 260 LLDRVHNELLTSKR----------FTNGCDTIISGIFGGQLQSDVTCLTCGTISKKQEAY 309
Query: 380 LDLSLPVPTKKAPSKKTQPASR 401
DLSL +P K P KT P +
Sbjct: 310 RDLSLDIPFK--PKLKTSPGKK 329
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 894 ESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS- 952
ESE E+ N K + +TK+ I + P +L +HLKRF R +K++ V F
Sbjct: 352 ESEWYMCEKCNKK-----QPSTKKFWILRLPNVLCLHLKRFRYSPLAR-TKVDTFVRFPI 405
Query: 953 EIINLRPYMDPGCTDHDN-----YDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKK 1006
+ +N+ P++ + + Y L V H G+ G GHY Y R
Sbjct: 406 KELNMDPFILKTNQKTNRMSIKAHLYDLAACVVHHGSGAGSGHYTTYARHE--------- 456
Query: 1007 ESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
G WY+ +D V + E + C+AYILFY +
Sbjct: 457 ----GSWYNFNDSSVSLTNEESIQHCKAYILFYTR 487
>gi|312372780|gb|EFR20666.1| hypothetical protein AND_19714 [Anopheles darlingi]
Length = 608
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 160/377 (42%), Gaps = 91/377 (24%)
Query: 97 KGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR-HPLVIQWENPHLRWCF 155
K S SK W+CL CG CG H ++H+ R H + + N + +C+
Sbjct: 91 KCSECAISKDNWMCLQCGVVLCGRYD-----NGHALKHSNGNRNHNICMNTANQSV-YCY 144
Query: 156 PCNTLIPVEKTEEN--------------GENKDALSEVVKLIKGRS-------TEISSVD 194
C+ + + T EN G+ D +SE ++ S T +S
Sbjct: 145 KCDEFV-INDTVENALDEIRQELKDGQLGDQMDTISETSSTLEEISSSKSIQETASTSSS 203
Query: 195 VEDAWFGSGNV-------------NSEIKS-------ESTVVSGSDLDGNACYVVR---- 230
+ W ++ NS + + + T+ S S+ + A R
Sbjct: 204 SDSGWEEPSSIVLAAPSTPTPPATNSSLVTVRKLRPRKRTISSDSNNENGATTAKRKSMR 263
Query: 231 ---GLANLGNTCFFNSVMQNLLAMSQLQDYF-----------------LNAELTFGPLTI 270
GL NLGNTCF NSV+Q+L + + YF + + T + +
Sbjct: 264 RVVGLRNLGNTCFMNSVLQSLSNIQEFSCYFNTMPALESKHKQKGYHSRSMKETMDDVFV 323
Query: 271 A--LKK-LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE 327
L+K L ++ G + I+P F I PQF+G++QHD+HE LR +LD L +E
Sbjct: 324 VEELRKVLLNLSQGGDGTKGAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTE 383
Query: 328 --------ELAFRK----RNSPSEGNGISSNQGP---VFVDYVFGGQIASTVRCVECGHS 372
ELA +K + +P +G+S Q V VFGG + S VRC+ CG
Sbjct: 384 LQQVAFPVELASQKSGEAKPNPYNVSGLSHLQAKGRNSIVTNVFGGVLQSEVRCLICGME 443
Query: 373 STVYEPFLDLSLPVPTK 389
S ++PFLDLSL +P K
Sbjct: 444 SKKHDPFLDLSLDIPEK 460
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 14/70 (20%)
Query: 973 YRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR 1031
Y L V+ H G GHY ++ GVW H +D V+EVS V
Sbjct: 532 YDLAAVIVHHGNGSSCGHYTSFAINN-------------GVWMHFNDHTVKEVSSAAVAE 578
Query: 1032 CEAYILFYEK 1041
C+ YILFY K
Sbjct: 579 CKPYILFYIK 588
>gi|393233831|gb|EJD41399.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 544
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 140/357 (39%), Gaps = 52/357 (14%)
Query: 42 PVMKERKPCPHLDKGIDSDKISVKIGSSDPIR-CEDCREGVGDRRGKKGKGKHGKKKGSS 100
P + R CPHL ID+ K S R G G+ K+ + +H S
Sbjct: 4 PTLDTR--CPHLAASIDAILPRFKSAVSWAARVAARPTNGPGEPPAKRRRIQHPSCAKCS 61
Query: 101 LVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTL 160
L + WVCL C AC P H++ H R++ H ++ + + WC C+T+
Sbjct: 62 L-SCASPWVCLQCHASACWSHAGP-----HILAHLRESGHAFAVEAKTGSI-WCSRCDTI 114
Query: 161 IPVEKTEENGENKDALSEVVKL---IKGRSTEISSV----DVEDAWFGSGNVNSEIKSES 213
+ +K E +E + + G+ T + V D +DA G N +
Sbjct: 115 VVSKKLEAEHSLLVLRAEEKRTRFHVDGKKTREAYVPWTPDPKDAEALRGVTNVPCRGR- 173
Query: 214 TVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL------NAELTFGP 267
RGL NLGNTC+ N ++Q L L++Y+L A
Sbjct: 174 ----------------RGLLNLGNTCYLNCILQTFLNNPLLRNYYLADRHNSKACDRAAC 217
Query: 268 LTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE 327
++ L KLFAE + P + + GY QHD+HE L LL+ L
Sbjct: 218 VSCELDKLFAEVYSGAQFAQPLGPTTMLHSTWLLSKDVSGYAQHDAHECLITLLNAL--- 274
Query: 328 ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ G +S V +F GQ+ S VRC C S +P LDLSL
Sbjct: 275 ---------HAHTRGSTSTSCNCVVHTIFAGQLQSEVRCARCSSHSRTLDPMLDLSL 322
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 888 LVAGNCESEESKVEEINSKIVKVKR---DATKRVLINKAPPILTIHLKRFSQ---DARGR 941
L C ++ E ++++ R +ATKR+ I + PP+L + LKRF D
Sbjct: 335 LTLEGCLKRYTRTERLDARDCPDCRHTAEATKRLSIRRLPPVLCVQLKRFEHKGADKGAA 394
Query: 942 LSKLNGHVNFSEIINLRPYMDP----------GCTDH---DNYDYRLVGVVEHLGTMRGG 988
K++ HV F IN+ PY+ P G D YDY L VV H G + G
Sbjct: 395 PQKIDAHVRFPAAINMLPYVSPKTGAKGAPGSGAVDTGPPSMYDYDLFAVVCHEGQIDNG 454
Query: 989 HYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL--RCEAYILFYEK 1041
HY + R + WY D V +L + L AY+L Y K
Sbjct: 455 HYTCFARSQDE-------------WYRYDDDKVTHATLRDALSPHGHAYMLCYVK 496
>gi|149045517|gb|EDL98517.1| ubiquitin specific petidase 45 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149045518|gb|EDL98518.1| ubiquitin specific petidase 45 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 376
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 18/150 (12%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 227 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCAATCKNIS 285
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVRGG-PKNKV-------------KAKKESVGGV 1012
+ Y L G+VEH G+MRGGHY AYV+ P K+ K +GG
Sbjct: 286 VGEKVLYGLYGIVEHSGSMRGGHYTAYVKVRVPSRKLSECITGRKTAPGLKEADSELGGH 345
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 346 WVHVSDTYVQVVPESRALSAQAYLLFYERI 375
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 27/142 (19%)
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
GPLT AL LF + E + ++P+ F +C KAP+FKG+QQ DS ELL LLD +
Sbjct: 32 GPLTSALF-LFLHSMKEAE-KGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHHLLDAVR 89
Query: 326 SEEL---------AF------------RKRNSPSEGNGISSNQGPVFVDYVFGGQIASTV 364
+EE AF RK+ G+ N F+D +F G++ STV
Sbjct: 90 TEETKRIQASILKAFNNPTTKTADEETRKKVKAYGKEGVKMN----FIDRIFIGELTSTV 145
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + ST+ +PF+D+SLP+
Sbjct: 146 MCEECANISTMKDPFIDISLPI 167
>gi|353227325|emb|CCA77835.1| related to ubiquitin carboxyl-terminal hydrolase
EC=3.1.2.15-Coprinopsis cinerea [Piriformospora indica
DSM 11827]
Length = 878
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 77/155 (49%), Gaps = 24/155 (15%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDAR------GRLSKLNGHVNFSEIINLRPYMDPGC 965
R A KR LI PP+L IHLKRF Q R G L K++ + F E ++L+P++ P
Sbjct: 702 RKAYKRYLIAVPPPVLVIHLKRFQQVTRMPVALFGSLKKIDDFIAFPEYLDLKPFIAPRR 761
Query: 966 TD---------------HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA---KKE 1007
D D YRL VV H+G M GGHYVAY P + + +
Sbjct: 762 EDFGLRPSKIKDNKGAYEDQVMYRLSAVVVHIGNMLGGHYVAYTALPPATPIDSASGEAP 821
Query: 1008 SVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
S W SD VR +LEEVL +AY+ FYE++
Sbjct: 822 SNERRWSFQSDQIVRVATLEEVLSAKAYLCFYERV 856
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 102/240 (42%), Gaps = 59/240 (24%)
Query: 201 GSGNVNSEIKSES-TVVSGSDLDGN--ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDY 257
G+ VNS + S T+V S + + + GL NLGN+C+ NS +Q L++ L++
Sbjct: 95 GAKQVNSAAPNISKTIVKKSKPNNSIAGLHFNPGLFNLGNSCYLNSTLQGLMSTRLLENI 154
Query: 258 FLNAELTFGPLTIALKKLFAETKPETG-------LRNV---------------------- 288
E T P + +LF E P LR+V
Sbjct: 155 ---VEFTIPPDFVG--RLFPERSPALRNGRGPQRLRHVDGMEICMTFIRTLEHGWHLRDT 209
Query: 289 --------INPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP--- 337
+N R + K Q+ +QQ D+HE LR LLD + EEL KR P
Sbjct: 210 TPARQRVSMNVRELRNRVGRKYDQYLDFQQQDAHEFLRHLLDCMYMEELDEIKRRQPPPV 269
Query: 338 SEGNGISSNQGPV-----------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G + PV FVD VFGGQ+AS + C C H S YEPF+DLSL +
Sbjct: 270 KRRRGQPAQDPPVQPIPENERLIPFVDQVFGGQLASMLICASCNHVSHTYEPFMDLSLSI 329
>gi|299744855|ref|XP_001831310.2| ubiquitin-specific protease [Coprinopsis cinerea okayama7#130]
gi|298406320|gb|EAU90473.2| ubiquitin-specific protease [Coprinopsis cinerea okayama7#130]
Length = 1315
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 97/196 (49%), Gaps = 44/196 (22%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AEL--------------TFGPLTIAL 272
GL N+GNTCF NS +Q L +L +YFLN AEL FG L L
Sbjct: 417 GLGNMGNTCFMNSALQCLAHTKELTEYFLNGVFKAELNRDNPLGMQGQIAEVFGAL---L 473
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
++++A + P T +PR F + APQF GYQQHDS EL+ LLDGL +
Sbjct: 474 ERIWASSGPSTSY----SPREFKQTLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVI 529
Query: 333 KR---NSPS-EGNG--------ISSNQG------PVFVDYVFGGQIASTVRCVECGHSST 374
K+ P EG G S +G V VD +F GQ ST+ C EC S
Sbjct: 530 KKPYVEKPDWEGGGDAELVKLAAKSWEGYMLRNDSVIVD-LFQGQYQSTLVCPECEKISI 588
Query: 375 VYEPFLDLSLPVPTKK 390
++PF+ L+LP+P +K
Sbjct: 589 TFDPFMYLTLPLPVQK 604
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 31/152 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINL---------- 957
K + ATK+ + KAP IL +HLKRFS + R K++ V+F E ++L
Sbjct: 976 KKHQQATKKFDLWKAPDILVVHLKRFSNN-RILRDKIDTFVDFPVEGLDLGDKVGERAVA 1034
Query: 958 RPYMDPGCTDHD----NYD----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESV 1009
+ G + N D Y L V EH+G + GGHY AY +
Sbjct: 1035 TRLKEQGVELEELKTVNLDEPLVYDLFAVDEHMGGLGGGHYRAYASN-----------HL 1083
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
G WYH D YV++ S EE + AY+LFY +
Sbjct: 1084 TGKWYHFDDGYVKQASAEESVNSNAYLLFYRR 1115
>gi|296216400|ref|XP_002754520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Callithrix
jacchus]
Length = 597
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 27/181 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRN--- 287
GL NLGNTCF NS++Q L +L+DY L+ + ++ L + T LR
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLHR--------LYVRDLHHGSNAHTALREASP 320
Query: 288 --VINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEGNGI 343
V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P + +
Sbjct: 321 NEVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHL 380
Query: 344 SSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA 391
++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+ +
Sbjct: 381 PDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGY 440
Query: 392 P 392
P
Sbjct: 441 P 441
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 16/127 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 477 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 532
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY + S G G W+ +D V +S +V +
Sbjct: 533 LYAVSNHSGTTMGGHYTAY----------SNCRSPGTGEWHTFNDSSVTPMSSSQVRTSD 582
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 583 AYLLFYE 589
>gi|343425268|emb|CBQ68804.1| related to UBP12-ubiquitin C-terminal hydrolase [Sporisorium
reilianum SRZ2]
Length = 1405
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 93/198 (46%), Gaps = 46/198 (23%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTI--ALKKLFAETKP 281
+RGL NLGNTCF NS +Q L +LQ YF++ T PL + A+ F
Sbjct: 512 LRGLNNLGNTCFMNSALQCLSNTYELQQYFVSGAYKEELNTDNPLGMGGAIADAFGNL-- 569
Query: 282 ETGLRNVIN-------PRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCS-------- 326
+ N+ N PR F + APQF GY QHDS ELL LLDGL
Sbjct: 570 ---ISNIWNGQGGSFWPREFKFALSRFAPQFSGYAQHDSQELLAFLLDGLHEDLNRILKK 626
Query: 327 --------------EELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHS 372
+ +AF KR + + + V VD +F GQ ST+ C +CG
Sbjct: 627 PYIEAPDWEGGDERDLVAFAKR----QWDIYKARNDSVIVD-LFQGQYRSTLVCPDCGKV 681
Query: 373 STVYEPFLDLSLPVPTKK 390
S ++PF+ L+LP+P KK
Sbjct: 682 SIKFDPFMYLTLPIPNKK 699
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 64/167 (38%), Gaps = 49/167 (29%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------------------- 951
R ATK+ + KAP IL +HLKRFS R KLN V+F
Sbjct: 1146 RQATKKFDLWKAPDILVVHLKRFSAGRHSR-DKLNMLVDFPLEGLDLTDRVEGTQALRRV 1204
Query: 952 -----------SEII----NLRPYMD-PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
SE + LRP D D Y L V H G + GGHY A+
Sbjct: 1205 QEEAKESGEELSESMLGSGILRPLEDNDDAVAVDRPIYDLYAVDNHFGGLGGGHYTAFA- 1263
Query: 996 GGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR-CEAYILFYEK 1041
K G WY D VR V+ E ++ AY+LFY +
Sbjct: 1264 ----------KSPADGKWYEFDDSSVRPVANPETVKSSSAYLLFYRR 1300
>gi|428179085|gb|EKX47957.1| hypothetical protein GUITHDRAFT_106044 [Guillardia theta CCMP2712]
Length = 353
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------------IALKKLFAE 278
GL+NLGNTCF NSV+Q L+ + L YF+ E + G L +L K
Sbjct: 13 GLSNLGNTCFMNSVLQCLVNTAPLSAYFVADEYS-GELNRSSKSWQLVDDYASLAKDMWR 71
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS 338
T T INP + I A QF GY+QHDS ELLR LLDGL E L KR P
Sbjct: 72 TAGNT--HTSINPSALKMQISRWARQFSGYEQHDSQELLRFLLDGL-QEGLMRPKREPPW 128
Query: 339 -------EGNGISSNQGPVFVDY----------VFGGQIASTVRCVECGHSSTVYEPFLD 381
E I+ ++ +Y +F GQ+ S V C C S Y+PF+D
Sbjct: 129 PYDDKDFEKRAIAEQSRRMWENYLARNNSQITDIFCGQLRSRVTCATCKRESNCYDPFMD 188
Query: 382 LSLPVPTK 389
LSLP+P K
Sbjct: 189 LSLPIPKK 196
>gi|91084663|ref|XP_967750.1| PREDICTED: similar to ubiquitin specific protease 41 [Tribolium
castaneum]
gi|270008628|gb|EFA05076.1| hypothetical protein TcasGA2_TC015173 [Tribolium castaneum]
Length = 764
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 27/187 (14%)
Query: 229 VRGLANLGNTCFFNSVMQNL-----LAMSQLQDYFLN-AELTFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L LQD+++N T + +L K FAE +
Sbjct: 423 LNGLKNIGNTCFMNSVIQCLSNTKTLLEYLLQDHYVNDINTTTSAMKGSLIKAFAEVIKK 482
Query: 283 TGLRN----VINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP- 337
++ V+N S I AP+F GY Q D+ E LR LL+GL + +++ P
Sbjct: 483 LWSQDASDRVVNTSSLKSQIQRFAPRFIGYAQQDAQEFLRYLLEGLHEDVNRVKEKPKPI 542
Query: 338 ----------SEGNGISSNQ-----GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
SE + S N+ VDY F GQ+ ST++C CGH S ++PF DL
Sbjct: 543 ITEIDEKLTDSEKSAESWNRYLRMDNSKIVDY-FVGQLKSTLKCTHCGHCSVTFDPFWDL 601
Query: 383 SLPVPTK 389
SLP+P +
Sbjct: 602 SLPIPQR 608
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K +R TK I K P IL IHLKRFS R R KL+ V+F E +++ Y T
Sbjct: 639 KERRKCTKSFTIQKFPKILVIHLKRFSLAERFR-GKLSVTVDFPLEGLDMSNYAADNITP 697
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L + H GT GHY AY R P K W+ +D V +S +
Sbjct: 698 ---CRYNLYAISNHSGTTYSGHYTAYCR-HPYTK----------AWHEYNDSRVSSISSK 743
Query: 1028 EVLRCEAYILFYEK 1041
++ EAY+LFYE+
Sbjct: 744 AIVSGEAYVLFYEQ 757
>gi|449689020|ref|XP_002163722.2| PREDICTED: uncharacterized protein LOC100214539 [Hydra
magnipapillata]
Length = 703
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 81/138 (58%), Gaps = 16/138 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--MDPGCT 966
KV ATK++LI K P ILT+HLKRF Q GRL K+ + F + +N+ P+ + C
Sbjct: 575 KVFTVATKQLLIQKLPVILTLHLKRFEQIGGGRLRKITKPIKFPKELNMAPFCSIFSDCQ 634
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYV--RGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
D Y L G++EH G + GGHYVAYV +G KN+ WY SD V ++
Sbjct: 635 K-DGVKYFLSGLIEHSGGLNGGHYVAYVKTKGDQKNQ-----------WYCISDSDVSKI 682
Query: 1025 SLEEVLRCEAYILFYEKI 1042
S ++VL +AY+LFYE++
Sbjct: 683 SEDQVLSKQAYLLFYERV 700
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 72/166 (43%), Gaps = 29/166 (17%)
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
T +INP + KAPQF+GYQQHDSHELLR LLD + +EE+ R S E
Sbjct: 3 TSSSKIINPSKLLSEVSKKAPQFRGYQQHDSHELLRYLLDSIRTEEIK-RLETSLKEALS 61
Query: 343 ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRA 402
SSN I T++ + + E F VP K K +P A
Sbjct: 62 PSSN----------TCNINETIKLYLKSAKTHIDELF----GGVPKK----DKKKPNETA 103
Query: 403 KKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLTESTA 448
K K K +++AK T+ N +SQS +ES A
Sbjct: 104 KDDKPLSKHQQKMKAKATR----------KNTRNKKRSQSKSESNA 139
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 147/324 (45%), Gaps = 52/324 (16%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPV 163
+K++W+CL CG +CG + +SH ++ H + + N + +C+ C+ V
Sbjct: 36 NKSLWLCLCCGLVSCGRY-IAGHAKSH--HKEKEPLHSVCLDCHNMAI-FCYICDEF--V 89
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGS---- 219
NG+ ++ I+ R +IS+ E+ + + S+ST S
Sbjct: 90 INDTPNGD--------IEKIRSRLQDISA-SAENQTKENRQLRRRCSSDSTSTENSRKRQ 140
Query: 220 -DLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAE 278
D GL NLGNTCF N+V+Q+L + Y +L ++ KK+
Sbjct: 141 KKTDDKKRLRRSGLRNLGNTCFMNAVLQSLSNIQTFCGYI--QQLPSLEQKMSKKKITTR 198
Query: 279 TKPE------------------TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
+ E G + I+P S F I P+F+GYQQ D+HE +R L
Sbjct: 199 SCTEGNDVFVVEELRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHEFMRYL 258
Query: 321 LDGLCSEEL------AFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSST 374
LD L +E + A + NSP G+ + + V +FGG + S V C+ CG S
Sbjct: 259 LDRLHTELMTLIPYNATVRPNSPYVGSPLGKSS---VVTAIFGGILQSEVNCLICGMESK 315
Query: 375 VYEPFLDLSLPVPTK---KAPSKK 395
++PFLD+SL +P+K K P+ K
Sbjct: 316 KHDPFLDISLDIPSKFTCKTPNPK 339
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 29/163 (17%)
Query: 892 NCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+C S + VEE+ + K ++ +TK+ I + P +L +HLKRF R+ K+
Sbjct: 349 DCLSSFTDVEELEDTELYMCANCKCRQRSTKKFWIRRLPNVLCLHLKRFRWSTYLRV-KV 407
Query: 946 NGHVNFS-EIINLRPYMDPGCTDHDNYD-------YRLVGVVEHLGTMRG-GHYVAYVRG 996
+ H+NF + + +M + N Y L VV H G+ G GHY +Y
Sbjct: 408 DTHINFPLRGLEMNHFMLDNLHETRNSSASGSQSKYDLAAVVVHHGSGAGSGHYTSY--- 464
Query: 997 GPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
A E G WYH +D V + E V +C+AYILFY
Sbjct: 465 -------AVHE---GGWYHFNDSSVTQCDEETVAKCKAYILFY 497
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 34/202 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF-----------------LNAELTFGPLTIALK 273
GL NLGNTCF N+++Q+L + Q YF + + G +++L
Sbjct: 85 GLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVALRSGKTAGRRMYHTRSQGDNSVSLV 144
Query: 274 KLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
+ F +T G + +P S F I P F+GYQQ D+HE +R LLD L EL +
Sbjct: 145 EEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGYQQQDAHEFMRYLLDHL-HRELQY 203
Query: 332 RKRN-----SPSEGNGISSNQG-------PVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
+ SP +G +SS +G P V +FGG + + V C+ CG S ++PF
Sbjct: 204 SRNGASHPVSPQDGVRLSSAEGKCCTNGAPSVVTSIFGGLLQNEVNCLICGTESRKFDPF 263
Query: 380 LDLSLPVPT--KKAPSKKTQPA 399
LDLSL +P+ ++ SK +P+
Sbjct: 264 LDLSLDIPSQFRQKRSKDQEPS 285
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 17/134 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K ++ +TK+ I+ P +L +HLKRF A R +K++ +V F + +++R Y+ +P +
Sbjct: 315 KKRQKSTKKFWIHNLPKVLCLHLKRFHWTAFLR-NKIDTYVEFPLKGLDMRGYLLEPENS 373
Query: 967 DHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
+ Y LV VV H G+ G GHY AY S WYH +D V +
Sbjct: 374 LPGSCLYDLVAVVVHHGSGVGSGHYTAY-------------GSHEACWYHFNDSTVTLTN 420
Query: 1026 LEEVLRCEAYILFY 1039
+ V + +AYILFY
Sbjct: 421 EDTVRKAKAYILFY 434
>gi|388855753|emb|CCF50741.1| related to UBP12-ubiquitin C-terminal hydrolase [Ustilago hordei]
Length = 1422
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 90/193 (46%), Gaps = 36/193 (18%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTI--ALKKLFAE--T 279
+RGL NLGNTCF NS +Q L +LQ YF++ T PL + A+ F T
Sbjct: 536 LRGLNNLGNTCFMNSALQCLSNTYELQQYFVSGAYKQELNTDNPLGMGGAIADAFGNLIT 595
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC-------------- 325
G PR F + APQF GY QHDS ELL LLDGL
Sbjct: 596 NIWNGQGGSFWPREFKFALSRFAPQFSGYAQHDSQELLAFLLDGLHEDLNRILKKPYIEA 655
Query: 326 --------SEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYE 377
+ +AF KR + + + V VD +F GQ ST+ C EC S ++
Sbjct: 656 PDWEGGDEKDLVAFAKR----QWDIYKARNDSVIVD-LFQGQYRSTLVCPECNKISIKFD 710
Query: 378 PFLDLSLPVPTKK 390
PF+ L+LP+P KK
Sbjct: 711 PFMYLTLPIPNKK 723
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 65/167 (38%), Gaps = 49/167 (29%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------------------- 951
R ATK+ + KAP IL +HLKRFS R KLN V+F
Sbjct: 1155 RQATKKFDLWKAPDILVVHLKRFSAGRHSR-DKLNMLVDFPLEGLDLTDRVEGTQALRRV 1213
Query: 952 -----------SEII----NLRPYMD-PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
SE + LRP D D Y L V H G + GGHY A+
Sbjct: 1214 QAEAKESGEELSESMLGSGILRPLEDNDDAVAVDAPIYDLYAVDNHFGGLGGGHYTAFA- 1272
Query: 996 GGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR-CEAYILFYEK 1041
K G WY D+ VR V+ E ++ AY+LFY +
Sbjct: 1273 ----------KSPADGKWYEFDDLSVRPVANAETVKSSSAYLLFYRR 1309
>gi|170049923|ref|XP_001870961.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871584|gb|EDS34967.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 920
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 183/490 (37%), Gaps = 137/490 (27%)
Query: 34 VESTDDGVPVMKERKP-----CPHLDKGIDSDKISVKIGSSDPI--RCEDCREGVGDRRG 86
ES DD + R P C H+ I + + ++ S+ + C C E R
Sbjct: 16 TESNDDA----RVRNPAAGDVCVHVKNSIHTPTVRKRVKSAGGLDQACGKCAESKSAGRA 71
Query: 87 KKGKGKHGKKKGSSLVD----SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR--- 139
G + S L+D ++W+CL CG CG + H + H + R
Sbjct: 72 DPGP----EPLVSDLLDYDEPDPSLWMCLKCGSQLCG-----RSVNQHALEHYKTPRSES 122
Query: 140 HPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGR---STEISSVDVE 196
H L + + WC+ C+ + + + D + + K+ + S E +E
Sbjct: 123 HALCLNTTRFQV-WCYQCDQEVNPKAVPRLADIVDYVRQEAKVAAMKNVTSVEQPPPTIE 181
Query: 197 DAWFGSGNVNSEIKSESTVVSGSDLDGNACYV---------------------------- 228
+ + S + S T+ +G D D A V
Sbjct: 182 NL---EQTIASAVNSIRTLAAGGDGDSTASGVTNSTMVYGPQPKPTSAPNYRDIRLDIGG 238
Query: 229 ----------------------VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----- 261
+RGL+NLGNTCFFN+V+Q L L D +
Sbjct: 239 GTGRKLPAIATSSLSIVDSLPRLRGLSNLGNTCFFNAVVQCLTRTPYLLDVLRESSVQGE 298
Query: 262 --ELTFGPLTIA------LKKLFAETKPETGLRNVI--------------NPRSFFGCIC 299
+L GPL + L + E P V+ +P F +
Sbjct: 299 KFQLPGGPLKLKDGTETELSPISGELNPWGSFTQVLAESLSELQSGGGVFSPSKLFSQLT 358
Query: 300 SKAPQFKGYQQHDSHELLRCLLDGLCSEE-----------LAFRKRNSPS---------- 338
+K PQF G QHDSHELLR LL+ + SE+ L + KR P+
Sbjct: 359 NKWPQFAGMDQHDSHELLRHLLESVRSEDLRRYQLVILLSLGYGKRVDPNTVEDTMKEKI 418
Query: 339 EGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQP 398
+ G +++ + + VF G + ST+ C +C H S +E FLDLSLP+ S+K QP
Sbjct: 419 KFYGTQASERILGPEPVFRGFLVSTLTCQDCYHVSARHESFLDLSLPI-----NSEKPQP 473
Query: 399 ASRAKKTKLP 408
R K + P
Sbjct: 474 PIRRKGSPEP 483
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 21/128 (16%)
Query: 887 QLVAGN----CESEESKVEEINSKIVK-VKRDATKRVLINKAPPILTIHLKRFSQDARGR 941
+L+AGN CE+ E IN K K V +ATK+ LI+ P +L +HLKRF RG
Sbjct: 670 ELMAGNNKVCCEA---CTERINGKEGKSVNTNATKQFLISSPPAVLILHLKRFQVGPRGM 726
Query: 942 LSKLNGHVNFSEIINLRPY----------MDPGCTDHDNYDYRLVGVVEHLGTMRGGHYV 991
K+ V F ++++ P+ + PG Y L G+VEH GTM GGHYV
Sbjct: 727 FRKMTKTVTFPFVLDIAPFCGSRVKKLPTVRPG---QKKLLYSLYGIVEHSGTMHGGHYV 783
Query: 992 AYVRGGPK 999
AYV+ P+
Sbjct: 784 AYVKVRPQ 791
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 998 PKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
PK ++ + G WY+ SD +VRE + + VL +AY+LFYE+I
Sbjct: 875 PKPELLPDVDPPPGKWYYVSDSHVRETTEDSVLNAQAYLLFYERI 919
>gi|443898438|dbj|GAC75773.1| ubiquitin C-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 1407
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 93/198 (46%), Gaps = 46/198 (23%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTI--ALKKLFAETKP 281
+RGL NLGNTCF NS +Q L +LQ YF++ T PL + A+ + F
Sbjct: 533 LRGLNNLGNTCFMNSALQCLSNTYELQQYFVSGAYRDELNTDNPLGMGGAIAEAFGNL-- 590
Query: 282 ETGLRNVIN-------PRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE------- 327
+ N+ N PR F + APQF GY QHDS ELL LLDGL +
Sbjct: 591 ---ISNIWNGQGGSFWPREFKFALSRFAPQFSGYAQHDSQELLAFLLDGLHEDLNRILKK 647
Query: 328 ---------------ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHS 372
+AF KR + + + V VD +F GQ ST+ C EC
Sbjct: 648 PYIEAPDWDGGDEKALVAFAKR----QWDIYKARNDSVIVD-LFQGQYRSTLVCPECSKI 702
Query: 373 STVYEPFLDLSLPVPTKK 390
S ++PF+ L+LP+P KK
Sbjct: 703 SIKFDPFMYLTLPIPNKK 720
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 63/167 (37%), Gaps = 49/167 (29%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------------------- 951
R ATK+ + KAP IL +HLKRFS R KLN V+F
Sbjct: 1150 RQATKKFDLWKAPDILVVHLKRFSAGRHSR-DKLNMLVDFPLEGLDLTDRVEGTQALRRV 1208
Query: 952 -----------SEII----NLRPYMD-PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
SE + LRP D D Y L V H G + GGHY A+
Sbjct: 1209 QEEAKQSGEELSESMLGSGILRPLEDNDDAVAVDKPIYDLYAVDNHFGGLGGGHYTAFA- 1267
Query: 996 GGPKNKVKAKKESVGGVWYHASDVYVREVS-LEEVLRCEAYILFYEK 1041
K G WY D VR V+ E V AY+LFY +
Sbjct: 1268 ----------KSPADGKWYEFDDSSVRPVANPESVKSASAYLLFYRR 1304
>gi|336381122|gb|EGO22274.1| hypothetical protein SERLADRAFT_440291 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1348
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 93/199 (46%), Gaps = 50/199 (25%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----EL--------------TFGPLTIAL 272
GL N+GNTCF NS +Q L + +L DYF++ EL FG L L
Sbjct: 433 GLGNMGNTCFMNSALQCLAHLEELTDYFISGVYQDELNPDNPLGMHGAIAEAFGSL---L 489
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE----- 327
++++A P T +PR F + APQF GYQQHDS EL+ LLDGL +
Sbjct: 490 QRIWATNSPSTSY----SPREFKQQLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVL 545
Query: 328 ----------------ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGH 371
ELA + S G V VD +F GQ ST+ C EC
Sbjct: 546 KKPYVEKPDWEGGGDLELAQLAQKS---WEGYMQRNDSVIVD-LFQGQYQSTLVCPECQK 601
Query: 372 SSTVYEPFLDLSLPVPTKK 390
S ++PF+ L+LP+P +K
Sbjct: 602 VSITFDPFMYLTLPLPVQK 620
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 85/198 (42%), Gaps = 40/198 (20%)
Query: 872 TSSGYSAEKVYQSDSQLVA---GNCESEESKVEEINSKIV------KVKRDATKRVLINK 922
T Y+ K +D +L +C +E +K E++ + K + ATK+ + K
Sbjct: 944 THHEYTDAKQAAADQKLKGISLNDCLAEFTKEEQLGEDDLWYCPQCKKHQQATKKFDLWK 1003
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM-----------DPG 964
AP IL +HLKRFS ++R K++ V+F +I R + G
Sbjct: 1004 APDILVVHLKRFS-NSRALRDKIDTFVDFPIQGLHLEHMIGERKIATKLAESGVDTRELG 1062
Query: 965 CTDHDN-YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVRE 1023
D D Y L V EHLG + GGHY AY N + K WYH D YV
Sbjct: 1063 LDDLDEPLTYDLFAVDEHLGGLGGGHYRAYAL----NHITDK-------WYHFDDSYVTP 1111
Query: 1024 VSLEEVLRCEAYILFYEK 1041
E + AY+LFY +
Sbjct: 1112 ARSTEAVNANAYLLFYRR 1129
>gi|327272916|ref|XP_003221230.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 2
[Anolis carolinensis]
Length = 953
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 104/216 (48%), Gaps = 32/216 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRIR 416
+P KK S + P ++ + K+ K G I+
Sbjct: 439 LPMKKERSLEVYLVRMDPLAKPMQYKVVVPKIGNIQ 474
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVEFPITDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S E+++ AY+LFY++
Sbjct: 884 STASEEQIVSKAAYVLFYQR 903
>gi|327272914|ref|XP_003221229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 1
[Anolis carolinensis]
Length = 981
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 104/216 (48%), Gaps = 32/216 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 289 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 348
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 349 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 408
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 409 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 466
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRIR 416
+P KK S + P ++ + K+ K G I+
Sbjct: 467 LPMKKERSLEVYLVRMDPLAKPMQYKVVVPKIGNIQ 502
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V F SE + + P
Sbjct: 812 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVEFPITDLDMSEFL-INPNA 869
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 870 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 911
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S E+++ AY+LFY++
Sbjct: 912 STASEEQIVSKAAYVLFYQR 931
>gi|390343728|ref|XP_003725951.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Strongylocentrotus purpuratus]
Length = 979
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTFG-PLTI--ALKKLFAETKPE- 282
GL NLGNTCF NS +Q + + L YFL+ EL + PL + + K +A+
Sbjct: 293 GLGNLGNTCFMNSALQCMNNVPPLTRYFLSDEFKKELNYNNPLGMHGEIAKAYADLVQHV 352
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------RN 335
+G + + PR+F + APQF GYQQHDS ELL L DGL + +K R+
Sbjct: 353 WSGQNSYLIPRNFKMQVGRFAPQFSGYQQHDSQELLAFLCDGLHEDLNRIQKKPYVELRD 412
Query: 336 SPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
S + + +++ + VD+ F GQ ST+ C EC S ++PF LSLP+
Sbjct: 413 SDGRSDEVVADEAWSNHLKRNDSIIVDF-FHGQFKSTLVCPECQKVSVTFDPFSFLSLPL 471
Query: 387 PTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
PTKK + + P S+ + K+ K G +
Sbjct: 472 PTKKERTMEVFLIRLDPKSKPLQMKVVVPKHGMV 505
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K ++ATK+ + K P +L IHLKRFS + R KL+ V F NL C +
Sbjct: 792 KKHQEATKKFDLWKLPKVLIIHLKRFSYN-RFLRDKLDTLVTFP-TENLDMSSSVICPNG 849
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
Y Y LV V H G M GGHY AY + WY+ D V + S E+
Sbjct: 850 GPYQYDLVAVSNHYGGMGGGHYTAYAQNACTQN-----------WYYFDDSSVSDASKEQ 898
Query: 1029 VLRCEAYILFY 1039
V+ AY+LFY
Sbjct: 899 VVSKAAYVLFY 909
>gi|321478478|gb|EFX89435.1| hypothetical protein DAPPUDRAFT_310510 [Daphnia pulex]
Length = 936
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 35/190 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE----------LTFG-----PLTIALKKL 275
GL NLGNTC+ N+V+Q L + L++YFL+ + L FG I L++L
Sbjct: 238 GLGNLGNTCYMNAVLQALANTTPLKNYFLDKKFQADINRDNPLGFGGSLAIAFAIILRQL 297
Query: 276 FAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRK 333
+ +G R+ I P + ++A QF GY QHD+ E + LLDGL + + +
Sbjct: 298 W------SGQRDSIEPSHLKSLLANRASQFSGYAQHDAQEFMAFLLDGLHEDLNRVKTKP 351
Query: 334 RNSPSEGNG-----ISSNQGPVF-------VDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
+P E NG ++ V+ +D +F GQ ST+ C C + S ++PFL
Sbjct: 352 LTTPVESNGRPDHIVADEAWQVYKMRNDSVIDDLFQGQFKSTLVCPACQNISVTFDPFLY 411
Query: 382 LSLPVPTKKA 391
L+LP+P K+
Sbjct: 412 LALPLPPSKS 421
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Query: 861 QDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLI 920
Q+ S DG TS ++ Q + S+E E K R+ATK++ +
Sbjct: 739 QENSDPSADGDTSPNQRRLTLHHCLQQFMQSEVLSKE---EAWYCPKCKEHREATKQMSV 795
Query: 921 NKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYRLVGVV 979
+ P ILTI LKRFS K++ V+F E ++L PY+ T+H Y L VV
Sbjct: 796 WRLPEILTIQLKRFSFRNLMWRDKIDQKVHFPVEQLDLSPYLS-SITEHGAV-YDLYAVV 853
Query: 980 EHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
H G + GHY ++ R K++K+ VG W D VR++ E V+ AY+L Y
Sbjct: 854 NHYGGILYGHYTSFARCPAATSDKSQKDVVG--WRCMDDRQVRDICEESVVTSAAYLLLY 911
Query: 1040 EK 1041
++
Sbjct: 912 QR 913
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 145/334 (43%), Gaps = 67/334 (20%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQW-------ENPHLRWCFP 156
+K+ W+CL C CG H +H + + V Q E H C
Sbjct: 35 NKSPWICLTCLMVHCG-----RYVNGHAKKHFEENQVLGVSQRKGEKHEKEKIHHSVCMD 89
Query: 157 CNTL-IPVEKTEENGENKDALSEVVKLIKG-RSTEISSV--------DVEDAWFGSGNVN 206
C++ + + +E N L +V KL + +S E S++ ++D+ G G +
Sbjct: 90 CSSYSVFCYRCDEFVVNDTKLGQVQKLREHLQSLENSALMGERQRKRKLQDSPAGDGKL- 148
Query: 207 SEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------- 258
+K V G+ GL NLGNTCF N+++Q+L + Q YF
Sbjct: 149 --LKDSDGVALGAT----------GLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVAL 196
Query: 259 ---------LNAELTFGPLTIALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKG 307
+ + G +++L + F +T G + +P S F I P F+G
Sbjct: 197 RSGKTAGRRMYHTRSQGDNSVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRG 256
Query: 308 YQQHDSHELLRCLLDGLCSEELAFRKRN-----SPSEGNGISSNQGPV-------FVDYV 355
YQQ D+HE +R LLD L EL + + SP +G +SS G V +
Sbjct: 257 YQQQDAHEFMRYLLDHL-HRELQYSRNGASHPLSPQDGVRLSSTDGKCCTNGTASVVTSI 315
Query: 356 FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 316 FGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 349
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 17/134 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K ++ +TK+ I K P +L +HLKRF A R +K++ +V F + +++R Y+ +P +
Sbjct: 391 KKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLR-NKVDTYVEFPLKGLDMRGYLLEPEKS 449
Query: 967 DHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
+ Y LV VV H G+ G GHY AY S G WYH +D V +
Sbjct: 450 LPGSCLYDLVAVVVHHGSGVGSGHYTAY-------------GSHEGRWYHFNDSTVTLTN 496
Query: 1026 LEEVLRCEAYILFY 1039
+ V + +AYILFY
Sbjct: 497 EDTVRKAKAYILFY 510
>gi|42562472|ref|NP_174562.2| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Arabidopsis
thaliana]
gi|166201360|sp|Q9MAQ3.2|UBP11_ARATH RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 11;
AltName: Full=Deubiquitinating enzyme 11; Short=AtUBP11;
AltName: Full=Ubiquitin thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|332193411|gb|AEE31532.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Arabidopsis
thaliana]
Length = 892
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFG---PLTIALKKLFAETK 280
GL NLGNTCF NS +Q L + +YFL NA+ G L IA +L K
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELL--RK 359
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
+ +N + PR+F + APQF GY QHDS E+L LLDGL E+L KR E
Sbjct: 360 LWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGL-HEDLNKVKRKPYIEA 418
Query: 341 NGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ V VD VF GQ ST+ C +CG S ++PF+ LSL
Sbjct: 419 KDSDGRPDDEVAEEKWKYHKARNDSVIVD-VFQGQYKSTLVCPDCGKISITFDPFMYLSL 477
Query: 385 PVPTKKAPS 393
P+P+ + S
Sbjct: 478 PLPSSRTRS 486
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ D
Sbjct: 760 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYFKNKIDTLVNFHIHDLDLSKYVKN--ED 816
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L + H G + GGHY AY + + K WY+ D V V+
Sbjct: 817 GQSYLYELYAISNHYGGLGGGHYTAYAKLMDETK-----------WYNFDDSRVSAVNES 865
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY+++
Sbjct: 866 EIKTSAAYVLFYQRV 880
>gi|432953305|ref|XP_004085340.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial
[Oryzias latipes]
Length = 786
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L DYFL + T PL + + +++AE +
Sbjct: 34 GLSNLGNTCFMNSAVQCLSNTPPLTDYFLKDKYTDELNEDNPLGMKGEIARVYAELIKQL 93
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + + PR F + APQF GYQQ DSHELL LLDGL E+L R R P
Sbjct: 94 WSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGL-HEDLN-RIRKKPYIQL 151
Query: 338 SEGNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ NG I N + VD +F G ST+ C C S ++PF L+
Sbjct: 152 KDANGRPDKVVAEEAWENHIKRNDS-IIVD-IFHGLFKSTLVCPVCAKVSVTFDPFCYLT 209
Query: 384 LPVPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
LP+P KK + + P ++ + KL K G I
Sbjct: 210 LPLPMKKERTLEVYLVRLDPVAKPTQYKLTVPKVGCI 246
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 560 KQHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDSLVDFPLRDLDMSEFL-INPNA 617
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY AY KNK K WY+ D V
Sbjct: 618 GP-CR------YDLIAVSNHYGGMGGGHYTAYA----KNKDDGK-------WYNFDDSSV 659
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 660 SPASEDQIVSKAAYVLFYQR 679
>gi|384253395|gb|EIE26870.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Coccomyxa
subellipsoidea C-169]
Length = 1926
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 905 SKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPG 964
S + V+R+A K LI++AP +LT+HLKRF QD RGRL+K+ G V F +++ P+ DP
Sbjct: 1692 STKISVQREAVKGYLIHRAPEVLTLHLKRFQQDMRGRLAKIKGRVPFPADLDITPFCDPK 1751
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYV 994
D Y LVGVVE G M GHY AYV
Sbjct: 1752 GKDAAGAQYTLVGVVEQQGGMSSGHYWAYV 1781
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 29/169 (17%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE------LTFGPLTIALKKLFAETKPE 282
V GL NLGNTC++NS +Q L+++ L++++ + L G + AL+++
Sbjct: 72 VYGLINLGNTCYYNSALQALVSVPALRNFYTQPQPQKGRQLEKGSIGAALQEVVQTV--- 128
Query: 283 TGLRNVINPRSFFGCICSK---APQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + + + G S+ P F S LR + + + F++R +E
Sbjct: 129 YGHKEAEHAHTTKGARVSRREGTPLF-------SPSRLRAAVIRIAPQ---FKER---TE 175
Query: 340 GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ ++ F + +F G+++S V C EC H + E F DLSLP+P
Sbjct: 176 DALVPTS----FTEELFRGELSSRVVCKECSHETVTLEEFFDLSLPIPA 220
>gi|6910582|gb|AAF31287.1|AC006424_16 CDS [Arabidopsis thaliana]
Length = 887
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFG---PLTIALKKLFAETK 280
GL NLGNTCF NS +Q L + +YFL NA+ G L IA +L K
Sbjct: 297 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELL--RK 354
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
+ +N + PR+F + APQF GY QHDS E+L LLDGL E+L KR E
Sbjct: 355 LWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGL-HEDLNKVKRKPYIEA 413
Query: 341 NGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ V VD VF GQ ST+ C +CG S ++PF+ LSL
Sbjct: 414 KDSDGRPDDEVAEEKWKYHKARNDSVIVD-VFQGQYKSTLVCPDCGKISITFDPFMYLSL 472
Query: 385 PVPTKKAPS 393
P+P+ + S
Sbjct: 473 PLPSSRTRS 481
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ D
Sbjct: 755 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYFKNKIDTLVNFHIHDLDLSKYVKN--ED 811
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L + H G + GGHY AY + + K WY+ D V V+
Sbjct: 812 GQSYLYELYAISNHYGGLGGGHYTAYAKLMDETK-----------WYNFDDSRVSAVNES 860
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY+++
Sbjct: 861 EIKTSAAYVLFYQRV 875
>gi|428175942|gb|EKX44829.1| hypothetical protein GUITHDRAFT_109254 [Guillardia theta CCMP2712]
Length = 624
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 235 LGNTCFFNSVMQNLLAMSQLQDYFLNAE------LTFG--PLTIALKKLFAETKPETGLR 286
+GNTC+FNSVMQ+L+ L L + L G PL AL F G +
Sbjct: 1 MGNTCYFNSVMQSLIRTRPLLARLLQLDPSSCSPLADGSMPLHEALLD-FLRAAGAAGGK 59
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSN 346
V+ P FG I + P+FKG +QHD+ ELL ++D L +E+ K E G S +
Sbjct: 60 EVMKPGELFGEIVRQCPRFKGCRQHDALELLWTIIDLLRAEQRTMNKSEEAKEEGGASGD 119
Query: 347 ----QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ ++ VFGG+ S++ C C S V EPF+DLSLP+P +
Sbjct: 120 MKGKKKKTLIEDVFGGRSRSSILCRNCKFESVVMEPFVDLSLPLPER 166
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 948 HVNFSEIINLRPYM---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA 1004
H++F+ +++ + P D YRL +VEH G+M GHYVAYVR G
Sbjct: 513 HIDFALSLDMSSFCHQDSPALQQADKPIYRLYAIVEHHGSMTSGHYVAYVRAGRAGGGAE 572
Query: 1005 KKESVGGV-----WYHASDVYVREVSLEEVLRCEAYILFYEK 1041
++E WYH SD V++V+ +V+ C+AYILFY++
Sbjct: 573 EEEEEEEEEGQVPWYHISDASVKQVTEAKVMTCQAYILFYQR 614
>gi|392565514|gb|EIW58691.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1086
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 87/190 (45%), Gaps = 30/190 (15%)
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-------GPLTIALKKLFAE 278
RGL N+GNTCF NS +Q L ++L DYFL EL + G + A L +
Sbjct: 364 RGLGNMGNTCFMNSAIQCLAHNTELVDYFLTGAYQEELNYDNPLGMHGAVAQAFGALMSR 423
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN--- 335
+ PR F + APQF GYQQHDS EL+ LLDGL + K+
Sbjct: 424 IWDPESTMSSYTPREFKQTLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVE 483
Query: 336 ---------------SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
+ + G V VD +F GQ ST+ C EC S ++PF+
Sbjct: 484 KPDWEGGGDKELVELANTSWEGYMKQNDSVVVD-LFQGQYQSTLVCPECSKVSITFDPFM 542
Query: 381 DLSLPVPTKK 390
L+LP+P +K
Sbjct: 543 YLTLPLPVQK 552
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 79/184 (42%), Gaps = 37/184 (20%)
Query: 883 QSDSQLVAGNCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRFSQ 936
Q + +C E +K E++ + + K + ATKR + K P +L +HLKRFS
Sbjct: 886 QKQKGITLQDCLDEFTKEEKLGADDLWYCPSCKKHQQATKRFDLWKLPDVLVVHLKRFS- 944
Query: 937 DARGRLSKLNGHVNF-------SEIINLRPY--------MDPGCTDHDNYD----YRLVG 977
D+R K++ ++F +E++ R D + D Y L G
Sbjct: 945 DSRMLRDKIDTFIDFPIEGLDLTEMVGERLVGSRLREQGADVEALGLEGLDEPLQYDLFG 1004
Query: 978 VVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYIL 1037
V EHLG GGHY AY V G WYH D YV E E + AY+L
Sbjct: 1005 VDEHLGGSGGGHYRAYALN-----------HVTGKWYHFDDSYVTESRPEAAVNENAYLL 1053
Query: 1038 FYEK 1041
FY +
Sbjct: 1054 FYRR 1057
>gi|336368311|gb|EGN96654.1| hypothetical protein SERLA73DRAFT_111301 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1271
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 93/199 (46%), Gaps = 50/199 (25%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----EL--------------TFGPLTIAL 272
GL N+GNTCF NS +Q L + +L DYF++ EL FG L L
Sbjct: 378 GLGNMGNTCFMNSALQCLAHLEELTDYFISGVYQDELNPDNPLGMHGAIAEAFGSL---L 434
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE----- 327
++++A P T +PR F + APQF GYQQHDS EL+ LLDGL +
Sbjct: 435 QRIWATNSPSTSY----SPREFKQQLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVL 490
Query: 328 ----------------ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGH 371
ELA + S G V VD +F GQ ST+ C EC
Sbjct: 491 KKPYVEKPDWEGGGDLELAQLAQKS---WEGYMQRNDSVIVD-LFQGQYQSTLVCPECQK 546
Query: 372 SSTVYEPFLDLSLPVPTKK 390
S ++PF+ L+LP+P +K
Sbjct: 547 VSITFDPFMYLTLPLPVQK 565
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 85/198 (42%), Gaps = 40/198 (20%)
Query: 872 TSSGYSAEKVYQSDSQLVA---GNCESEESKVEEINSKIV------KVKRDATKRVLINK 922
T Y+ K +D +L +C +E +K E++ + K + ATK+ + K
Sbjct: 889 THHEYTDAKQAAADQKLKGISLNDCLAEFTKEEQLGEDDLWYCPQCKKHQQATKKFDLWK 948
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM-----------DPG 964
AP IL +HLKRFS ++R K++ V+F +I R + G
Sbjct: 949 APDILVVHLKRFS-NSRALRDKIDTFVDFPIQGLHLEHMIGERKIATKLAESGVDTRELG 1007
Query: 965 CTDHDN-YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVRE 1023
D D Y L V EHLG + GGHY AY N + K WYH D YV
Sbjct: 1008 LDDLDEPLTYDLFAVDEHLGGLGGGHYRAYAL----NHITDK-------WYHFDDSYVTP 1056
Query: 1024 VSLEEVLRCEAYILFYEK 1041
E + AY+LFY +
Sbjct: 1057 ARSTEAVNANAYLLFYRR 1074
>gi|357128315|ref|XP_003565819.1| PREDICTED: uncharacterized protein LOC100823751 [Brachypodium
distachyon]
Length = 1162
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 88/166 (53%), Gaps = 21/166 (12%)
Query: 228 VVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRN 287
VVRG+ N GN C+FN+V+Q+LLA+ +L+ L + L L+KLF ET G +
Sbjct: 867 VVRGMQNGGNRCYFNAVLQSLLALDKLRARMLGPDAPTRYLGQELQKLFIETTDTNGEGD 926
Query: 288 VINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQ 347
++ + F +CSK+P F+ + DS+ +L LLD L +EE
Sbjct: 927 MLIAQDLFLHMCSKSPDFRPGMKEDSNNMLGSLLDVLHNEE------------------- 967
Query: 348 GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS 393
P V +F GQ+ V C ECGH+S E LDLSL +P+KK S
Sbjct: 968 -PTMVKSLFRGQVIKHVSCKECGHTSVTTED-LDLSLAIPSKKPAS 1011
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPG 964
K+ R AT R I+K P+L I LKRF+ SKL HV+F + +++ +MDPG
Sbjct: 1106 KIYRAATVRYDISKVAPLLIIQLKRFNYVHPDMPSKLGEHVSFQDTLDITKFMDPG 1161
>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
Length = 606
Score = 99.8 bits (247), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L+ G + AL + FA +T
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGSSVHTALMEEFAKLIQTIWT 328
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 329 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNPENL 388
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 389 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 448
Query: 389 KKAP 392
+ P
Sbjct: 449 RGYP 452
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 488 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 543
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 592
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 593 YLLFYE 598
>gi|431908477|gb|ELK12073.1| Ubiquitin carboxyl-terminal hydrolase 2 [Pteropus alecto]
Length = 570
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSNAHTALMEEFAKLIQTMW 327
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R ++SP
Sbjct: 328 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSSPEN 387
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 447
Query: 388 TKKAP 392
+ P
Sbjct: 448 KRGYP 452
Score = 45.4 bits (106), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L V H GT GGHY AY R V G W+ +D V +S +
Sbjct: 506 YNLYAVSNHSGTTMGGHYTAYCR-----------SPVTGEWHTFNDSSVTPMSSSQTRTS 554
Query: 1033 EAYILFYE 1040
+AY+LFYE
Sbjct: 555 DAYLLFYE 562
>gi|5669678|gb|AAD46422.1|AF105715_1 ubiquitous nuclear protein [Gallus gallus]
Length = 950
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 103/213 (48%), Gaps = 30/213 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPS---KKTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEESEMDPLAKPMQYKVVVPKIGNI 471
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K + ATK++ + PP+L +HLKRFS +R KL+ V F IN P +
Sbjct: 782 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVGFP--INDLDMSIPYNPNA 838
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
Y L+ V H G M GGHY A+V KNK K WY+ D V ++
Sbjct: 839 GPCRYNLIAVSNHYGGMGGGHYTAFV----KNKDDGK-------WYYFDDSSVSIACEDQ 887
Query: 1029 VLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 888 IVSKAAYVLFYQR 900
>gi|156363293|ref|XP_001625980.1| predicted protein [Nematostella vectensis]
gi|156212838|gb|EDO33880.1| predicted protein [Nematostella vectensis]
Length = 341
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 48/270 (17%)
Query: 106 AIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEK 165
+I +CL C C + H + H T + + + WC+ C+ IPV
Sbjct: 76 SICICLRCSKQGCDRY----SNGKHGLSHYEDTPSHCITVNLSSLMVWCYSCDIEIPVA- 130
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
N + +D ++ ++K ++ ++ G+G + + + V S++
Sbjct: 131 --PNTDLQDCINLLLKALQSTGRQLQ---------GNGLLPKVVLRD--VTQDSEIMARH 177
Query: 226 CY----VVRGLANLGNTCFFNSVMQNLLAMSQL--------QDYFLN---------AELT 264
+ +V+GL NLGNTCFFN+VMQNL L QD +++ +EL+
Sbjct: 178 YHPQHKLVKGLVNLGNTCFFNAVMQNLCQTELLYLVMKFASQDDYMHTFTAPNKQLSELS 237
Query: 265 F------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
G LT+ALKKL + K +NP+ F IC K+P+F+GYQQ DS ELLR
Sbjct: 238 VKVATPPGSLTMALKKLLIQMKNSDP--GPLNPKHLFSEICKKSPRFRGYQQQDSQELLR 295
Query: 319 CLLDGLCSEELAFRKRNSPSEGNGISSNQG 348
CLLD + +E+L R + + G+++ +G
Sbjct: 296 CLLDSIKTEQLR-RLKIGVLDAFGVNAEEG 324
>gi|449547942|gb|EMD38909.1| hypothetical protein CERSUDRAFT_104201 [Ceriporiopsis subvermispora
B]
Length = 1264
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 91/193 (47%), Gaps = 38/193 (19%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTI----------ALKKL 275
GL N+GNTCF NS +Q L +L DYFL EL F PL + L+++
Sbjct: 415 GLGNMGNTCFMNSALQCLAHTQELTDYFLMGVFEDELNFDNPLGMHGQIAQAFGALLRRI 474
Query: 276 FAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR- 334
+A T +PR F + APQF GYQQHDS EL+ LLDGL + K+
Sbjct: 475 WAPNSSATSY----SPREFKQALQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRILKKP 530
Query: 335 --NSPS-EG--------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYE 377
P EG G V VD +F GQ ST+ C EC S ++
Sbjct: 531 YIEKPDWEGGDDRDLAKLANESWQGYLRRNDSVIVD-LFQGQYQSTLVCPECSKVSITFD 589
Query: 378 PFLDLSLPVPTKK 390
PF+ L+LP+P +K
Sbjct: 590 PFMYLTLPLPVQK 602
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 66/152 (43%), Gaps = 31/152 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATKR + K P +L +HLKRFS ++R K++ V+F +E++ R
Sbjct: 979 KKHQQATKRFDLWKVPDVLVVHLKRFS-NSRALRDKIDTFVDFPIEGLDLTEMVGERLVA 1037
Query: 962 DP-----------GCTDHDN-YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESV 1009
D G + D Y L V EHLG + GGHY AY +
Sbjct: 1038 DRLKAQGVDTQELGMSGTDEPLVYDLYAVDEHLGGLGGGHYRAYALNDTDKQ-------- 1089
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
WYH D YV E + AY+LFY +
Sbjct: 1090 ---WYHFDDSYVTPTRAEAAVNSNAYLLFYRR 1118
>gi|195432581|ref|XP_002064295.1| GK19779 [Drosophila willistoni]
gi|194160380|gb|EDW75281.1| GK19779 [Drosophila willistoni]
Length = 1170
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 111/233 (47%), Gaps = 54/233 (23%)
Query: 218 GSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQL-----------QDYFL------- 259
GS ++ + VRGL NLGNTCFFN+VMQ L L +++ L
Sbjct: 309 GSAVEIDRLPTVRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFVLPGGSFSF 368
Query: 260 ----NAEL--------TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKG 307
N EL ++G LT AL E + G V P F +C+K PQF G
Sbjct: 369 KDKGNIELPMIRGTLSSWGGLTAALANALEELQGRGG---VFTPSKLFDKLCAKCPQFTG 425
Query: 308 YQQHDSHELLRCLLDGLCSEELAFRKR-------------NSPSEGN----GISSNQGPV 350
QHD+HELLR LL+ + +E+L +R NS SE I NQ
Sbjct: 426 GDQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKDQDINSVSEEMRQKCKIYGNQAGD 485
Query: 351 FV---DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK-APSKKTQPA 399
+ + VF G + ST+ C +C + S+ +E FLD+SLPV +K P ++ +P+
Sbjct: 486 RILRPEQVFRGFLVSTLTCQDCFNISSRHEYFLDMSLPVAVEKPQPPQRRKPS 538
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 862 DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLIN 921
++G CSV ++ ++A ++ +++ CES ++ + K V +ATK++LI+
Sbjct: 903 EDGECSVQSCLNN-FTAVELMTGQNKV---GCESCTKRLNGPDPKAKSVNTNATKQLLIS 958
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YR 974
P +L +HLKRF R KL V + ++++ + + N D Y
Sbjct: 959 SPPAVLILHLKRFQLGPRCIFRKLTRAVTYPMLLDVAAFCGSKVKNLPNIDRKQKKLLYA 1018
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPK 999
L GVVEH G M GGHY A+V+ PK
Sbjct: 1019 LYGVVEHSGGMYGGHYTAFVKVRPK 1043
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ SD V+EVS E L+ +AY+LFYE+I
Sbjct: 1138 GKWYYVSDSRVQEVSEETALKAQAYLLFYERI 1169
>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
Length = 612
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 275 GLRNLGNTCFMNSILQCLSNTRELKDYCLQ-RLYMQDLSHTSSTHTALMEEFAKLIQTIW 333
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 334 TSCPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNPEN 393
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
N + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 394 LNHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 453
Query: 388 TKKAP 392
+ P
Sbjct: 454 KRSYP 458
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 494 KKFSIQRFPTILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 549
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 550 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 598
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 599 YLLFYE 604
>gi|71020237|ref|XP_760349.1| hypothetical protein UM04202.1 [Ustilago maydis 521]
gi|46099973|gb|EAK85206.1| hypothetical protein UM04202.1 [Ustilago maydis 521]
Length = 1427
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 91/193 (47%), Gaps = 36/193 (18%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTI--ALKKLFAE--T 279
+RGL NLGNTCF NS +Q L +LQ YF++ T PL + A+ + F T
Sbjct: 536 LRGLNNLGNTCFMNSALQCLSNTYELQQYFVSGAYKEELNTDNPLGMGGAIAEAFGNLIT 595
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC-------------- 325
G PR F + APQF GY QHDS ELL LLDGL
Sbjct: 596 NIWNGQGGSFWPREFKFALSRFAPQFSGYAQHDSQELLAFLLDGLHEDLNRILKKPYIEA 655
Query: 326 --------SEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYE 377
+ +AF KR + + + V VD +F GQ ST+ C +C S ++
Sbjct: 656 PDWEGGDEKDLVAFAKR----QWDIYKARNDSVIVD-LFQGQYRSTLVCPDCSKVSIKFD 710
Query: 378 PFLDLSLPVPTKK 390
PF+ L+LP+P +K
Sbjct: 711 PFMYLTLPIPNRK 723
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 64/167 (38%), Gaps = 49/167 (29%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------------------- 951
R ATK+ + KAP IL +HLKRFS R KLN V+F
Sbjct: 1163 RQATKKFDLWKAPDILVVHLKRFSAGRHSR-DKLNMLVDFPLEGLDLTDRVEGTQALRRV 1221
Query: 952 -----------SEII----NLRPYMD-PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
SE + LRP D D Y L V H G + GGHY A+
Sbjct: 1222 QEEAEKSGEELSESMLGSGILRPLEDNDDAVAVDRPIYDLYAVDNHFGGLGGGHYTAFA- 1280
Query: 996 GGPKNKVKAKKESVGGVWYHASDVYVREVS-LEEVLRCEAYILFYEK 1041
K G WY D VR V+ E+V AY+LFY +
Sbjct: 1281 ----------KSPADGKWYEFDDSSVRPVANPEQVKSSSAYLLFYRR 1317
>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 602
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 24/195 (12%)
Query: 221 LDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKK 274
+D + + GL NLGNTCF NS++Q L +L+DY L L L+ AL +
Sbjct: 255 MDSKSTQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSNAHTALME 313
Query: 275 LFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL--CSEEL 329
FA +T + L +V++P F I AP+F GY Q D+ E LR LLDGL +
Sbjct: 314 EFAKLIQTIWTSSLNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNAVNRV 373
Query: 330 AFRKRNSPSEGNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYE 377
R +++P + + ++ ++ Y+ F GQ+ S++ C +CG+ STV++
Sbjct: 374 TVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFD 433
Query: 378 PFLDLSLPVPTKKAP 392
PF DLSLP+ + P
Sbjct: 434 PFWDLSLPIAKRGYP 448
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 484 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFAS-ETTNHAVYN-- 539
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V + +V +A
Sbjct: 540 LYAVSNHSGTTVGGHYTAYCR-----------SPVTGEWHTFNDSSVTSMFSSQVRTSDA 588
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 589 YLLFYE 594
>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
garnettii]
Length = 606
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGPLT-IALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L+ G AL + FA +T
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGSSAHTALMEEFAKLIQTIWT 328
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R +++P
Sbjct: 329 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAPRPKSNPENL 388
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 389 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 448
Query: 389 KKAP 392
+ P
Sbjct: 449 RGYP 452
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 488 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 543
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCR-----------SPVTGEWHTFNDSSVTPMSSSQVRTSDA 592
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 593 YLLFYE 598
>gi|326430318|gb|EGD75888.1| hypothetical protein PTSG_11617 [Salpingoeca sp. ATCC 50818]
Length = 1046
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----------FGPLTIALKKLFAET 279
GL NLGNTCF NS +Q L L YFL G L +A ++L A+
Sbjct: 335 GLTNLGNTCFMNSALQCLSHTLPLTRYFLEGPYKEDLNPDNPIGCGGRLAMAYRELIAQL 394
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G VI PR F I APQF GYQQHDS EL LLDGL E+L R R+ P
Sbjct: 395 W--QGSARVITPREFKFAIGRFAPQFVGYQQHDSQELTSFLLDGL-HEDLN-RIRDKPYV 450
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ + VD +F GQ+ ST+ C +C S ++PF+ L
Sbjct: 451 EMKEAEGEDAEAAALAWHRHKLRNDSIIVD-LFHGQLKSTLVCPDCNKVSITFDPFMYLQ 509
Query: 384 LPVPTKKAPSKKTQPASRA-KKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQ 441
+P+P + K P + + K PPK+ G ++ T T ++ Q + ++ S S+
Sbjct: 510 VPLPENET---KVFPVTVSFKDPNRPPKRYG-VKLPKTTGTISMMCQELEKMTGVSASK 564
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 17/137 (12%)
Query: 907 IVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPG 964
+ K ++A K++ + K P L IHLKRFS ++ R KL+ V+F E ++L PY +DP
Sbjct: 856 VCKEPKEAEKQMEVWKLPDTLVIHLKRFSYNSWWR-DKLDTLVDFPLEGLDLGPYVLDP- 913
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
HD+ Y L GV H+G + GGHY AY G WY D YV E+
Sbjct: 914 -QQHDSAVYDLYGVSNHMGGLGGGHYTAYCL------------DTNGRWYEFDDSYVGEI 960
Query: 1025 SLEEVLRCEAYILFYEK 1041
+ + ++ +Y LFY++
Sbjct: 961 APKNIVSTSSYFLFYQR 977
>gi|224093937|ref|XP_002186908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Taeniopygia guttata]
Length = 953
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLAKPMQYKVVVPKIGNI 473
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|224093933|ref|XP_002186882.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Taeniopygia guttata]
Length = 981
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 289 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 348
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 349 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 408
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 409 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 466
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 467 LPMKKERTLEVYLVRMDPLAKPMQYKVVVPKIGNI 501
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 812 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 869
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 870 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 911
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 912 STASEDQIVSKAAYVLFYQR 931
>gi|28972259|dbj|BAC65583.1| mKIAA0529 protein [Mus musculus]
gi|148692494|gb|EDL24441.1| ubiquitin specific peptidase 15, isoform CRA_c [Mus musculus]
Length = 955
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 264 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 323
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 324 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 383
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 384 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 441
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 442 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 476
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 787 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 844
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 845 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 886
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 887 STASEDQIVSKAAYVLFYQR 906
>gi|21592289|ref|NP_660185.1| ubiquitin carboxyl-terminal hydrolase 15 [Rattus norvegicus]
gi|81872777|sp|Q9R085.1|UBP15_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase of 109 kDa; AltName:
Full=Ubiquitin thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|6492122|gb|AAF14188.1|AF106657_1 deubiquitinating enzyme Ubp109 [Rattus norvegicus]
Length = 952
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 439 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 473
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 SSASEDQIVSKAAYVLFYQR 903
>gi|170086692|ref|XP_001874569.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649769|gb|EDR14010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 93/194 (47%), Gaps = 40/194 (20%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFG-PLTIA----------LKKL 275
GL N+GNTCF NS +Q L +L DYFL EL G PL + L+++
Sbjct: 408 GLGNMGNTCFMNSALQCLAHTKELSDYFLTGVFQDELNPGNPLGMGGAIAEVFGALLERI 467
Query: 276 FAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEEL--AFRK 333
+A P N +PR F + APQF GYQQHDS EL+ LLDGL E+L +K
Sbjct: 468 WATEGPS----NSYSPREFKTQLQRFAPQFSGYQQHDSQELVAFLLDGL-HEDLNRVLKK 522
Query: 334 -----------------RNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVY 376
R + G V VD +F GQ ST+ C EC S +
Sbjct: 523 PYVEKPDWEGGDHLELVRLAQKSWEGYMLRNDSVIVD-LFQGQYQSTLVCPECQKVSITF 581
Query: 377 EPFLDLSLPVPTKK 390
+PF+ L+LP+P +K
Sbjct: 582 DPFMYLTLPLPVQK 595
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 40/190 (21%)
Query: 877 SAEKVYQSDSQLVAGNCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIH 930
SAEK D + +C E +K E + + K + ATK+ + KAP IL +H
Sbjct: 927 SAEK---RDKGISLQDCLDEFTKEERLGEDDLWYCPRCKKHQQATKKFDLWKAPDILVVH 983
Query: 931 LKRFSQDARGRLSKLNGHVNF-------SEIINLRPYMDPGCTDHDNYD----------- 972
LKRFS ++R K++ ++F SE++ R + D
Sbjct: 984 LKRFS-NSRALRDKIDAFIDFPIEGLDLSEMVGERAVAKKLLAAGNGVDELGLGSLDEPL 1042
Query: 973 -YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR 1031
Y L V EH+G + GGHY AY + G WYH D YV S + +
Sbjct: 1043 VYDLFAVDEHMGGLGGGHYRAYA-----------SNHLTGKWYHFDDSYVSPASAIDAVN 1091
Query: 1032 CEAYILFYEK 1041
AY+LFY +
Sbjct: 1092 ANAYLLFYRR 1101
>gi|410919011|ref|XP_003972978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Takifugu
rubripes]
Length = 1015
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKPE- 282
GL+NLGNTCF NS +Q L + L +YFL + T PL + + + +AE +
Sbjct: 291 GLSNLGNTCFMNSAVQCLSNIPPLTEYFLKDKYTDELNEDNPLGMKGEIARAYAELIKQI 350
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR F + APQF GYQQ DSHELL LLDGL + RK+
Sbjct: 351 WSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYIQLKD 410
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N I N + VD +F G ST+ C C S ++PF L+LP
Sbjct: 411 ANGRPDKVVAEEAWENHIKRNDS-IIVD-IFHGLFKSTLVCPVCSKVSVTFDPFCYLTLP 468
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + KL K G I
Sbjct: 469 LPMKKERTLEVYLVRLDPLAKPTQYKLTVPKVGYI 503
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 817 KQHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDSLVDFPLRDLDMSEFL-INPNA 874
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY AY KNK K WY+ D V
Sbjct: 875 GP-CR------YDLIAVSNHYGGMGGGHYTAYA----KNKDDGK-------WYYFDDSSV 916
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ Y+LFY++
Sbjct: 917 SPASEDQIVSKAGYVLFYQR 936
>gi|164656707|ref|XP_001729481.1| hypothetical protein MGL_3516 [Malassezia globosa CBS 7966]
gi|159103372|gb|EDP42267.1| hypothetical protein MGL_3516 [Malassezia globosa CBS 7966]
Length = 1232
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 90/191 (47%), Gaps = 31/191 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-------GPLTIALKKLFA 277
+RGLANLGNTCF NS +Q L +LQ YFLN EL G L +A +L +
Sbjct: 404 LRGLANLGNTCFMNSALQCLSNTHELQQYFLNGVQMDELNTDNPLGMGGTLAMAYGRLVS 463
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK---- 333
E+ V+ PR F + APQF GY Q DS ELL LLDGL + K
Sbjct: 464 ALWSESASGAVV-PREFKTTLARFAPQFMGYAQQDSQELLAFLLDGLHEDLNRIHKKPYI 522
Query: 334 --------------RNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
R + + + + V VD +F GQ ST+ C C S ++PF
Sbjct: 523 EAPDWIGGSDADMVRFAQQQWDLYKARNDSVIVD-LFQGQYRSTLVCPTCHKVSVKFDPF 581
Query: 380 LDLSLPVPTKK 390
+ L+LP+P +
Sbjct: 582 MYLTLPIPNTR 592
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 44/162 (27%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM--------- 961
R ATK+ + K P IL +HLKRFS RG KL+ + F E ++LR +
Sbjct: 965 RQATKKFDLWKVPDILVVHLKRFSA-GRGTRDKLDNWIEFPLEHLDLRDRVVGTRLWHSL 1023
Query: 962 ------------DPGCTDHDNYD---------YRLVGVVEHLGTMRGGHYVAYVRGGPKN 1000
+ HD +D Y L V H G + GGHY A+
Sbjct: 1024 RMERAPSQMQLKEGLIVSHDTHDDDVLADEPVYDLYAVDNHFGGLGGGHYTAFA------ 1077
Query: 1001 KVKAKKESVGGVWYHASDVYVREVSLEEVLRCE-AYILFYEK 1041
K G WY+ D VR VS ++++ AY+LFY +
Sbjct: 1078 -----KNPADGHWYNFDDSCVRPVSDPDMVKSSAAYLLFYRR 1114
>gi|74228797|dbj|BAE21887.1| unnamed protein product [Mus musculus]
Length = 952
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 439 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|326911484|ref|XP_003202088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 2
[Meleagris gallopavo]
Length = 953
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVFLVRMDPLAKPMQYKVVVPKIGNI 473
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 25/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRF--SQDARGRLSKLNGH----VNFSEIINLRPYMD 962
K + ATK++ + PP+L +HLKRF S+ R +L L G ++ SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSEFL-INPNAG 842
Query: 963 PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR 1022
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 843 P-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSVS 884
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 885 IACEDQIVSKAAYVLFYQR 903
>gi|149066660|gb|EDM16533.1| ubiquitin specific peptidase 15, isoform CRA_b [Rattus norvegicus]
Length = 952
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 439 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|74220030|dbj|BAE40593.1| unnamed protein product [Mus musculus]
Length = 952
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 439 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|53759138|ref|NP_997702.1| ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Gallus gallus]
Length = 953
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVFLVRMDPLAKPMQYKVVVPKIGNI 473
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 25/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRF--SQDARGRLSKLNGH----VNFSEIINLRPYMD 962
K + ATK++ + PP+L +HLKRF S+ R +L L G ++ SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSEFL-INPNAG 842
Query: 963 PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR 1022
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 843 P-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSVS 884
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 885 IACEDQIVSKAAYVLFYQR 903
>gi|149066659|gb|EDM16532.1| ubiquitin specific peptidase 15, isoform CRA_a [Rattus norvegicus]
Length = 981
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 468 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 502
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|21489969|ref|NP_081880.2| ubiquitin carboxyl-terminal hydrolase 15 [Mus musculus]
gi|28558361|sp|Q8R5H1.1|UBP15_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|18653399|gb|AAL77418.1|AF468037_1 deubiquitinating enzyme Usp15 [Mus musculus]
gi|74217049|dbj|BAE26626.1| unnamed protein product [Mus musculus]
gi|148692492|gb|EDL24439.1| ubiquitin specific peptidase 15, isoform CRA_a [Mus musculus]
Length = 981
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 468 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 502
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|29747941|gb|AAH50042.1| Ubiquitin specific peptidase 15 [Mus musculus]
Length = 981
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 468 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 502
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|74149555|dbj|BAE36413.1| unnamed protein product [Mus musculus]
Length = 981
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 468 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 502
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|126339080|ref|XP_001363326.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Monodelphis domestica]
Length = 954
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 785 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 842
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 843 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 884
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 885 STASEDQIVSKAAYVLFYQR 904
>gi|53759136|ref|NP_990171.2| ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Gallus gallus]
Length = 981
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 289 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 348
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 349 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 408
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 409 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 466
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 467 LPMKKERTLEVFLVRMDPLAKPMQYKVVVPKIGNI 501
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 25/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRF--SQDARGRLSKLNGH----VNFSEIINLRPYMD 962
K + ATK++ + PP+L +HLKRF S+ R +L L G ++ SE + + P
Sbjct: 812 KEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSEFL-INPNAG 870
Query: 963 PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR 1022
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 P-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSVS 912
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 913 IACEDQIVSKAAYVLFYQR 931
>gi|326911482|ref|XP_003202087.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 1
[Meleagris gallopavo]
Length = 981
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 289 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 348
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 349 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 408
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 409 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 466
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 467 LPMKKERTLEVFLVRMDPLAKPMQYKVVVPKIGNI 501
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 25/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRF--SQDARGRLSKLNGH----VNFSEIINLRPYMD 962
K + ATK++ + PP+L +HLKRF S+ R +L L G ++ SE + + P
Sbjct: 812 KEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSEFL-INPNAG 870
Query: 963 PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR 1022
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 P-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSVS 912
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 913 IACEDQIVSKAAYVLFYQR 931
>gi|395537795|ref|XP_003770875.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Sarcophilus harrisii]
Length = 954
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 785 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 842
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 843 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDTSV 884
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 885 STGSEDQIVSKAAYVLFYQR 904
>gi|395537793|ref|XP_003770874.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Sarcophilus harrisii]
Length = 983
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 814 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 871
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 872 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDTSV 913
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 914 STGSEDQIVSKAAYVLFYQR 933
>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
Length = 619
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 282 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 340
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 341 TSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPET 400
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 401 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 460
Query: 388 TKKAP 392
+ P
Sbjct: 461 KRGYP 465
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 501 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 556
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 557 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 605
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 606 YLLFYE 611
>gi|126339078|ref|XP_001363243.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Monodelphis domestica]
Length = 983
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 814 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 871
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 872 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 913
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 914 STASEDQIVSKAAYVLFYQR 933
>gi|441644453|ref|XP_003253547.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Nomascus
leucogenys]
Length = 577
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALMEEFAKLIQTIWT 327
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 387
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 447
Query: 389 KKAP 392
+ P
Sbjct: 448 RGYP 451
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVR 995
L V H GT GGHY AY R
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR 563
>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
africana]
Length = 396
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYLRDLSHSSSAHTALMEEFAKLIQTIW 117
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 118 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNPEN 177
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C ECG+ STV++PF DLSLP+
Sbjct: 178 LDRLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWDLSLPIA 237
Query: 388 TKKAP 392
+ P
Sbjct: 238 KRGYP 242
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHD 969
++ K+ I + P IL +HLKRFS+ +R R SKL V+F ++LR + T+H
Sbjct: 273 RKRCIKKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVSFPLRDLDLREFASEN-TNHA 330
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
Y+ L V H GT GGHY AY R G W+ +D V +S +V
Sbjct: 331 VYN--LYAVSNHSGTTMGGHYTAYCRSPGT-----------GEWHTFNDSSVTPMSSSQV 377
Query: 1030 LRCEAYILFYE 1040
+AY+LFYE
Sbjct: 378 RTSDAYLLFYE 388
>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
Length = 613
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 334
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 335 TSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPET 394
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 395 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 454
Query: 388 TKKAP 392
+ P
Sbjct: 455 KRGYP 459
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 495 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 550
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 551 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 599
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 600 YLLFYE 605
>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
Length = 618
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 24/205 (11%)
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL-- 268
S ST ++ + + GL NLGNTCF NS++Q L +L+DY L L L
Sbjct: 261 SRSTSPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGH 319
Query: 269 ----TIALKKLFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
AL + FA +T + +V++P F I AP+F GY Q D+ E LR LL
Sbjct: 320 TSSAHTALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLL 379
Query: 322 DGLCSE--ELAFRKRNSPSEGNGISSNQG--PVFVDYV----------FGGQIASTVRCV 367
DGL +E +A R + SP + + + ++ Y+ F GQ+ S++ C
Sbjct: 380 DGLHNEVNRVAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCT 439
Query: 368 ECGHSSTVYEPFLDLSLPVPTKKAP 392
+CG+ STV++PF DLSLP+ + P
Sbjct: 440 DCGYCSTVFDPFWDLSLPIAKRGYP 464
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 500 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 555
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 556 LYAVSNHSGTTMGGHYTAYCR-----------SPVTGEWHTFNDSSVTPMSSSQVRTSDA 604
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 605 YLLFYE 610
>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
[Monodelphis domestica]
Length = 600
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 263 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYLRDLNSSSHAHTALMEEFAKLIQTIW 321
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 322 TSSANDVVSPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNPEN 381
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C ECG+ STV++PF DLSLP+
Sbjct: 382 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWDLSLPIA 441
Query: 388 TKKAP 392
+ P
Sbjct: 442 KRGYP 446
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I K P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 482 KKFSIQKFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 537
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 538 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRSSDA 586
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 587 YLLFYE 592
>gi|344266305|ref|XP_003405221.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Loxodonta
africana]
Length = 953
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPHTKPMQYKVVVPKIGNI 473
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINL-------RPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F II+L P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFP-IIDLDMSEFLINPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|114051714|ref|NP_001039895.1| ubiquitin carboxyl-terminal hydrolase 15 [Bos taurus]
gi|359065632|ref|XP_003586138.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Bos
taurus]
gi|122135735|sp|Q2HJE4.1|UBP15_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|88682918|gb|AAI05522.1| Ubiquitin specific peptidase 15 [Bos taurus]
gi|296487434|tpg|DAA29547.1| TPA: ubiquitin specific peptidase 15 [Bos taurus]
Length = 952
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 143/339 (42%), Gaps = 61/339 (17%)
Query: 97 KGSSLVD----SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHAR-----QTRHPLVIQWE 147
+GSS D +K+ WVCL C CG H +H T H + E
Sbjct: 144 EGSSTTDVCRSNKSPWVCLTCSSVHCG-----RYVNGHAKKHYEDAQIPMTNHKKTEKQE 198
Query: 148 NPHLRWCFPCNTL-IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNV- 205
C C++ + ++ N L V K+ + ++E++ F S
Sbjct: 199 KVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQ------NLENSAFTSDRHR 252
Query: 206 ------NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF- 258
NS + S+ V+GS NA GL NLGNTCF N+++Q+L + Q YF
Sbjct: 253 KRKLLENSTLNSKLLKVNGS----NAALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFK 308
Query: 259 ------LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICS 300
L T G T ++L + F +T G + +P S F +
Sbjct: 309 ELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWK 368
Query: 301 KAPQFKGYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPV 350
P F+GYQQ D+HE +R LLD L S + ++ +S S N N
Sbjct: 369 IMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGAST 428
Query: 351 FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
V +FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 429 VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 467
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y LV
Sbjct: 520 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLVA 578
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 579 VVVHHGSGVGSGHYTAY----------AAHE---GRWFHFNDSTVTLTDEETVGKAKAYI 625
Query: 1037 LFY 1039
LFY
Sbjct: 626 LFY 628
>gi|311264080|ref|XP_003129987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Sus scrofa]
Length = 606
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSSAHTALMEEFAKLIQTIW 327
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R ++SP
Sbjct: 328 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSSPEG 387
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 447
Query: 388 TKKAP 392
+ P
Sbjct: 448 KRGYP 452
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + + ++ Y
Sbjct: 488 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREF---ASENINHAVYN 543
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCR-----------SPVTGEWHTFNDSSVSPMSSSQVRTSDA 592
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 593 YLLFYE 598
>gi|307202725|gb|EFN82016.1| Ubiquitin carboxyl-terminal hydrolase 45 [Harpegnathos saltator]
Length = 768
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 44/216 (20%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINK 922
EG CSV+ + ++A ++ +++V C + E K +E K+V +TK+ L+++
Sbjct: 560 EGECSVESCLNQ-FTALELMTGSNKVVCEACTARERKGQEGPLKMVCTS--STKQYLVSQ 616
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-YRLVGVVEH 981
PP+L +HLKRF Q R + K+ HV+F +++L P C H Y L GVVEH
Sbjct: 617 VPPVLILHLKRF-QTQRVGVRKVFKHVSFPMLLDLAPV----CKSHKKPRLYALYGVVEH 671
Query: 982 LGTMRGGHYVAYVRGG---PKNKVK----------------------------AKKESV- 1009
G + GGHYVAYV+ P + ++ AK SV
Sbjct: 672 SGNVHGGHYVAYVKTRLPLPPDDLRWHFLSKDKHTDDESSNSSNSESEGEEASAKAASVV 731
Query: 1010 ---GGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ SD V EV VL+ +AY+LFYE+I
Sbjct: 732 KPPSGRWYYVSDSRVSEVDESTVLQSQAYLLFYERI 767
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 91/216 (42%), Gaps = 52/216 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQL-----------QDYFLNA----------ELTFGP 267
V GLANLGNTCFFN+V+Q L L Q + L E+ P
Sbjct: 38 VGGLANLGNTCFFNAVLQCLAQTPYLVKVLDDLRLPGQKFVLPGGKHKLADAEDEVDLPP 97
Query: 268 LTIALKK------LFAETKPE---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
+ L++ + ET + T P + + K Q QHDSHE LR
Sbjct: 98 IEGTLERWGSFTSVLCETLSKMQNTNGHQTYTPANLLCKLKKKTTQCVDGGQHDSHEFLR 157
Query: 319 CLLDGLCSEELAFRKRNSPSE-GNGISSNQGPV---------FVDY-----------VFG 357
LL+ + +E+L + E G +N G V F Y VF
Sbjct: 158 HLLEIVRNEDLRRYQSIILKEVGLNEKTNPGGVEKGLKSRIKFYGYQASTRLLGPEAVFR 217
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPV-PTKKAP 392
G + ST+ C++C HSS EPFLDLSLPV P K P
Sbjct: 218 GVLVSTLECLDCHHSSQRTEPFLDLSLPVTPDKPQP 253
>gi|156393804|ref|XP_001636517.1| predicted protein [Nematostella vectensis]
gi|156223621|gb|EDO44454.1| predicted protein [Nematostella vectensis]
Length = 1018
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 32/217 (14%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTIA--LKKLFAE--T 279
+ GLANLGNTCF NS +Q L L YFL+ E T PL + + K +A+
Sbjct: 290 LTGLANLGNTCFMNSGLQCLSNTMTLTKYFLSKEYVDELNTDNPLGMKGEIAKAYADLLN 349
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------ 333
+ +G + I PR F + APQF GYQQ DSHELL LLDGL E+L K
Sbjct: 350 QIWSGQSSSIAPRQFKMQVGRFAPQFSGYQQQDSHELLAFLLDGL-HEDLNRIKMKPYIE 408
Query: 334 -RNSPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
R++ + + +++ + VD +F G ST+ C EC S ++P LS
Sbjct: 409 LRDADGRPDQVVASEAWHNHRQRNDSIIVD-IFHGLFKSTLVCPECNKISVTFDPLCYLS 467
Query: 384 LPVPTKKAPS-----KKTQPASRAKKTKLPPKKSGRI 415
LP+P KK + K +P + + KL K G +
Sbjct: 468 LPLPVKKERNIECFLIKNEPMEKPVQFKLTVPKMGSV 504
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC-TD 967
K + A+K+ + P +L IHLKRFS + R K++ VNF P C D
Sbjct: 808 KKHQQASKKFDLWCLPEVLVIHLKRFSYTSLWR-DKIDTLVNF-----------PLCGLD 855
Query: 968 HDNYD---------YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
+Y Y L+GV H G M GGHY AY R + WY D
Sbjct: 856 MSDYVIGKDGPPPLYDLIGVSNHYGGMGGGHYTAYCRNHEDDH-----------WYSYDD 904
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V +++ E+++ AY+LFY++
Sbjct: 905 SSVSQINEEQIVSKAAYVLFYKR 927
>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 396
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSNAHTALMEEFAKLIQTIW 117
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL--CSEELAFRKRNSPSE 339
+ L +V++P F I AP+F GY Q D+ E LR LLDGL + R +++P
Sbjct: 118 TSSLNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNAVNRVTVRPKSNPEN 177
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 178 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 237
Query: 388 TKKAP 392
+ P
Sbjct: 238 KRGYP 242
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 278 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASE-TTNHAVYN-- 333
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V + +V +A
Sbjct: 334 LYAVSNHSGTTVGGHYTAYCRS-----------PVTGEWHTFNDSSVTSMFSSQVRTSDA 382
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 383 YLLFYE 388
>gi|403351801|gb|EJY75399.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 923
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 138/323 (42%), Gaps = 52/323 (16%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR-HPLVIQWENPHLRWCFPCN------- 158
+ +CL C CG + H + H + + H LV+Q ++ ++ WC+ C+
Sbjct: 146 VLICLHCLTSGCGRY-----EKKHALAHHEENKDHLLVLQSKSMNV-WCYECDEDLATIL 199
Query: 159 TLIPVEKTEENGENK---DALSEVVKLIKG-----------RSTEISSVDVEDAWFGSGN 204
T +P E + E + L E+ + G + ++D++
Sbjct: 200 TQLPPEDVSDRDELSLFLEQLHELFNRVLGGVNKRNKNNQQNTDNTKAIDIKQEGGTQQQ 259
Query: 205 VNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAM----------SQL 254
V ++K +S + + Y RGL NLGNTCFFNS +Q L A Q
Sbjct: 260 VQEDVK-DSEYTEKDIEEFHLSY--RGLKNLGNTCFFNSTLQCLNASRDFVLLYALPKQH 316
Query: 255 QDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSH 314
Q F NA + + L+ F + + G NP F IC + F+G+QQ D+H
Sbjct: 317 QFPFKNA----NCMNVLLRTFFFDVRNGKG---SFNPSPVFSGICRRNSTFRGFQQQDAH 369
Query: 315 ELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSST 374
+LL LD L E KR + G+ + FV+ VFG ++V C++C S
Sbjct: 370 DLLVNFLDMLVLEHDQLIKRTKQEKMRGLKKS----FVEDVFGSFYLNSVLCLDCMRVSR 425
Query: 375 VYEPFLDLSLPVPTKKAPSKKTQ 397
+P D+S+ + K+ + TQ
Sbjct: 426 TRDPTFDMSVTISFKQQGNSTTQ 448
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 28/147 (19%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDN--- 970
A KR+++ P L I+LKRF+Q A SK + ++F ++NL +M D
Sbjct: 780 ALKRLIMIDPPKNLIINLKRFTQMA-FTFSKNSKRISFPLLLNLDDFMIHQINKQDTDLL 838
Query: 971 ---------------YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYH 1015
Y YRL GVV H G+M GGHYVAY + K W++
Sbjct: 839 DIYQKATLDKDWVPKYQYRLYGVVCHSGSMSGGHYVAYTSYNYQGK---------KYWFY 889
Query: 1016 ASDVYVREVSLEEVLRCEAYILFYEKI 1042
SD +V +V ++ L CEAYILFY+++
Sbjct: 890 MSDSFVEQVDEKQALNCEAYILFYQRV 916
>gi|350584211|ref|XP_003126389.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Sus
scrofa]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|348580469|ref|XP_003476001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Cavia
porcellus]
Length = 947
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 27/134 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CQ------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAY 1035
S ++++ AY
Sbjct: 913 STASEDQIVSKAAY 926
>gi|14149627|ref|NP_006304.1| ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Homo sapiens]
gi|388454557|ref|NP_001253886.1| ubiquitin carboxyl-terminal hydrolase 15 [Macaca mulatta]
gi|5814097|gb|AAD52099.1|AF106069_1 deubiquitinating enzyme [Homo sapiens]
gi|20521071|dbj|BAA25455.2| KIAA0529 protein [Homo sapiens]
gi|119617512|gb|EAW97106.1| ubiquitin specific peptidase 15, isoform CRA_c [Homo sapiens]
gi|168267398|dbj|BAG09755.1| ubiquitin carboxyl-terminal hydrolase 15 [synthetic construct]
gi|380785461|gb|AFE64606.1| ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Macaca mulatta]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|417405393|gb|JAA49408.1| Putative ubiquitin carboxyl-terminal hydrolase 15 [Desmodus
rotundus]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
harrisii]
Length = 599
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 262 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYLRDLNSSSHAHTALMEEFAKLIQTIW 320
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 321 TSSANDVVSPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNPEN 380
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C ECG+ STV++PF DLSLP+
Sbjct: 381 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWDLSLPIA 440
Query: 388 TKKAP 392
+ P
Sbjct: 441 KRGYP 445
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I K P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 481 KKFSIQKFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 536
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 537 LYAVSNHSGTTMGGHYTAYCR-----------SPVTGEWHTFNDSSVTPMSSSQVRSSDA 585
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 586 YLLFYE 591
>gi|296212206|ref|XP_002752723.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Callithrix jacchus]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|291389465|ref|XP_002711347.1| PREDICTED: ubiquitin specific peptidase 15 isoform 1 [Oryctolagus
cuniculus]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVIVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2; AltName:
Full=Ubiquitin-specific-processing protease testis;
Short=UBP-t
gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
Length = 618
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 24/205 (11%)
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL-- 268
S ST ++ + + GL NLGNTCF NS++Q L +L+DY L L L
Sbjct: 261 SRSTSPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGH 319
Query: 269 ----TIALKKLFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
AL + FA +T + +V++P F I AP+F GY Q D+ E LR LL
Sbjct: 320 TSSAHTALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLL 379
Query: 322 DGLCSE--ELAFRKRNSPSEGNGISSNQG--PVFVDYV----------FGGQIASTVRCV 367
DGL +E +A R + SP + + + ++ Y+ F GQ+ S++ C
Sbjct: 380 DGLHNEVNRVAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCT 439
Query: 368 ECGHSSTVYEPFLDLSLPVPTKKAP 392
+CG+ STV++PF DLSLP+ + P
Sbjct: 440 DCGYCSTVFDPFWDLSLPIAKRGYP 464
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 500 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 555
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 556 LYAVSNHSGTTMGGHYTAYCR-----------SPVTGEWHTFNDSSVTPMSSSQVRTSDA 604
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 605 YLLFYE 610
>gi|403269028|ref|XP_003926560.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Saimiri boliviensis boliviensis]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|11077995|gb|AAG28973.1|AF013990_1 ubiquitin C-terminal hydrolase [Homo sapiens]
Length = 902
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 211 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 270
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 271 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 330
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 331 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 388
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 389 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 423
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 734 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 791
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 792 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 833
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 834 STASEDQIVSKAAYVLFYQR 853
>gi|359065629|ref|XP_003586137.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Bos
taurus]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|256084756|ref|XP_002578592.1| ubiquitin-specific peptidase 45 (C19 family) [Schistosoma mansoni]
Length = 749
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 109/242 (45%), Gaps = 55/242 (22%)
Query: 229 VRGLANLGNTCFFNSVMQ---------NLLAMSQLQDYFL-------------NAELTFG 266
V+GL NLGNTC+ N+ +Q NLL + + ++ L + L
Sbjct: 34 VKGLHNLGNTCYLNAALQCLAKSPWLLNLLVVDESRESALTKPNGDSLCTLCVSLPLMKC 93
Query: 267 PLTIALKKLFAETKP------ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
PLT K+L + KP + N I+P F + P+F G++QHDSHEL+R L
Sbjct: 94 PLTTQFKELISVLKPGELSNTKMSSSNTISPGMFRNVFIERCPRFSGFRQHDSHELIRAL 153
Query: 321 LDGLCSEELAFRKRNSPSEGNGISSNQGP---------------------VFVDYVFGGQ 359
LD L EEL+ K+ G + N P VD +FGG
Sbjct: 154 LDCLKQEELSRWKK-----GILLKLNVNPKDVRDDEKESIRSWGKAASIATIVDRLFGGI 208
Query: 360 IASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIRAKG 419
+ ST++C CG +EPFLDLSL V ++ SK+ S +K+ S ++R +
Sbjct: 209 LVSTIQCCCCGTVRPKFEPFLDLSLSV-SETNVSKRNINESVSKQHSKGASSSKQLRKRE 267
Query: 420 TK 421
K
Sbjct: 268 RK 269
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 17/136 (12%)
Query: 874 SGYSAEKVYQSDSQLVAGNCESEESKVEEINSKI--------------VKVKRDATKRVL 919
S Y++ ++ ++L+ C ++S ++E++S + + +D KR L
Sbjct: 481 SKYTSAELLTGSNRLICDVCTKQKS-LDELDSNLDSKSMDKQTPNNNKPDILQDTIKRDL 539
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDP-GCTDHDNYDYRLVGV 978
I K PPILTIHLKRF Q +L K ++F +++ P+ T + YRL GV
Sbjct: 540 IYKPPPILTIHLKRFQQ-VGFQLRKSQKRIHFPIYLDITPFCSVLAVTRSNQIRYRLYGV 598
Query: 979 VEHLGTMRGGHYVAYV 994
+EH G + GHYVAYV
Sbjct: 599 IEHTGHLTSGHYVAYV 614
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W++ SD +V VS VL C+AY+LFYE+I
Sbjct: 719 WFYCSDSHVTRVSQSTVLNCQAYVLFYERI 748
>gi|114644048|ref|XP_001166420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 5 [Pan
troglodytes]
gi|297692323|ref|XP_002823510.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Pongo abelii]
gi|397508880|ref|XP_003824867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Pan
paniscus]
gi|410211580|gb|JAA03009.1| ubiquitin specific peptidase 15 [Pan troglodytes]
gi|410254952|gb|JAA15443.1| ubiquitin specific peptidase 15 [Pan troglodytes]
gi|410300136|gb|JAA28668.1| ubiquitin specific peptidase 15 [Pan troglodytes]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|444721227|gb|ELW61972.1| Ubiquitin carboxyl-terminal hydrolase 15 [Tupaia chinensis]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKIVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 SIASEDQIVSKAAYVLFYQR 903
>gi|348515173|ref|XP_003445114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Oreochromis
niloticus]
Length = 1002
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFL + T PL + + + +AE +
Sbjct: 262 GLSNLGNTCFMNSAVQCLSNTPPLTEYFLKDKYTDELNEDNPLGMKGEIARAYAELIKQL 321
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR F + APQF GYQQ DSHELL LLDGL + RK+
Sbjct: 322 WSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYIQLKD 381
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N I N + VD +F G ST+ C C S ++PF L+LP
Sbjct: 382 ANGRPDKVVAEEAWENHIKRNDS-IIVD-IFHGLFKSTLVCPVCSKVSVTFDPFCYLTLP 439
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + KL K G I
Sbjct: 440 LPMKKERTLEVYLVRLDPLAKPTQYKLTVPKVGYI 474
Score = 40.4 bits (93), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 788 KQHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDSLVDFPLRDLDMSEFL-INPNA 845
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V GG + G KNK K WY+ D V
Sbjct: 846 GP-CR------YDLIAV----SNHYGGMGGGHYTGYAKNKDDGK-------WYNFDDSSV 887
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 888 SPASEDQIVSKAAYVLFYQR 907
>gi|440804466|gb|ELR25343.1| Ubiquitin carboxylterminal hydrolase 15, putative [Acanthamoeba
castellanii str. Neff]
Length = 1164
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL NLGNTCF NS +Q L + L ++FL T G L A L E
Sbjct: 369 GLQNLGNTCFMNSALQCLSNTAPLTNFFLRGTYKDDVNEVNPLGTKGELVEAYTGLLREI 428
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G PRSF + APQF GYQQHDS ELL LLDG+ E+L K+ E
Sbjct: 429 W--SGSARSTPPRSFKYKLERFAPQFSGYQQHDSQELLGFLLDGI-HEDLNRIKQKPYVE 485
Query: 340 G----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
G + V VD F GQ+ ST+ C EC S ++PF+ LS
Sbjct: 486 SKEADGRPDTEVAEETWQGHRARNDSVIVD-RFQGQLKSTLICPECSKVSITFDPFMYLS 544
Query: 384 LPVPTKKAPSKKT-----QPASRAKKTKLPPKKSGRIR 416
LP+P K PA R K L K G I+
Sbjct: 545 LPLPMKMTRRLAVTFISRDPARRPVKYALDVPKHGSIK 582
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHD 969
R ATK+ + K P IL +HLKRFS + KL+ V+F + ++L P+ + P T
Sbjct: 972 RQATKKFDVWKVPRILVVHLKRFSYRNKYWREKLDTFVDFPLDDLDLSPHVLGPVSTPP- 1030
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
Y L V H G++ GGHY AY + +NK WY D V V E V
Sbjct: 1031 --VYELYAVSNHYGSLGGGHYTAYAKNHRENK-----------WYKFDDSSVSSVQAESV 1077
Query: 1030 LRCEAYILFY 1039
AY+LFY
Sbjct: 1078 KTSAAYVLFY 1087
>gi|431892000|gb|ELK02447.1| Ubiquitin carboxyl-terminal hydrolase 15 [Pteropus alecto]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|114644046|ref|XP_509182.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 6 [Pan
troglodytes]
gi|297692321|ref|XP_002823509.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Pongo abelii]
gi|397508878|ref|XP_003824866.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Pan
paniscus]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|395852086|ref|XP_003798573.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Otolemur garnettii]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLAKPMQYKVVVPKIGNI 473
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S E+++ AY+LFY++
Sbjct: 884 STASEEQIVSKAAYVLFYQR 903
>gi|115527977|gb|AAI25124.1| Ubiquitin specific peptidase 15 [Homo sapiens]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|345776465|ref|XP_860477.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 10
[Canis lupus familiaris]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKIVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|355330276|ref|NP_001239007.1| ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Homo sapiens]
gi|28381406|sp|Q9Y4E8.3|UBP15_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15; AltName:
Full=Unph-2; AltName: Full=Unph4
gi|5231133|gb|AAD41086.1|AF153604_1 ubiquitin-specific protease homolog [Homo sapiens]
gi|119617511|gb|EAW97105.1| ubiquitin specific peptidase 15, isoform CRA_b [Homo sapiens]
gi|355786266|gb|EHH66449.1| Ubiquitin carboxyl-terminal hydrolase 15 [Macaca fascicularis]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|350584209|ref|XP_003481694.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Sus
scrofa]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|301768453|ref|XP_002919643.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Ailuropoda melanoleuca]
Length = 952
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKIVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|452824759|gb|EME31760.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Galdieria
sulphuraria]
Length = 1022
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 94/187 (50%), Gaps = 33/187 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----FGPLTIALKKLFAE------T 279
GL NLGNTCF N+ +Q L ++L +YFL+ + PL +K + AE +
Sbjct: 335 GLVNLGNTCFMNAALQCLSNAAKLTEYFLSEKYKSDINKRNPL--GMKGVLAEEYFRLLS 392
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR I APQF GYQQ DS EL+ LLDGL E+L R RN P
Sbjct: 393 HIWSGNESSFAPRQLKFQIALHAPQFTGYQQQDSQELMAFLLDGL-HEDLN-RIRNKPYI 450
Query: 338 ----------SEGNGISSNQ-----GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
E I+ Q + VD +F GQ STV C +CG S ++PF+ L
Sbjct: 451 EVIEGGDRPDDEVASIAWKQHLQRNNSIVVD-LFQGQYKSTVICPDCGKVSVTFDPFMYL 509
Query: 383 SLPVPTK 389
SLPVP+K
Sbjct: 510 SLPVPSK 516
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 907 IVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPG 964
+ K + A+K + + P IL IHLKRFS R +K+ V + +NL PY+ G
Sbjct: 862 VCKDHKQASKHLQLWSTPEILIIHLKRFSYSIWSR-TKVETFVKYPLNGLNLAPYIVGKG 920
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK-------VKAKKESVGGVWYHAS 1017
Y L V H G + GGHY AY K ++ + G WY+
Sbjct: 921 DIGAPQPLYDLYAVCNHFGGLGGGHYTAYSVSPWKVSDDESDPYFESNDGYLNGSWYNFD 980
Query: 1018 DVYVREVS-LEEVLRCEAYILFYEK 1041
D V +++ + + AY+LFY +
Sbjct: 981 DSSVLKMANSSQAVSDSAYVLFYRR 1005
>gi|403269026|ref|XP_003926559.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Saimiri boliviensis boliviensis]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|355564419|gb|EHH20919.1| Ubiquitin carboxyl-terminal hydrolase 15, partial [Macaca mulatta]
Length = 976
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 285 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 344
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 345 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 404
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 405 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 462
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 463 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 497
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 808 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 865
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 866 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 907
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 908 STASEDQIVSKAAYVLFYQR 927
>gi|73968609|ref|XP_849935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Canis lupus familiaris]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKIVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|3386552|gb|AAC28393.1| ubiquitin-specific protease UBP41 [Mus musculus]
Length = 353
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 16 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 74
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 75 TSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPET 134
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 135 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 194
Query: 388 TKKAP 392
+ P
Sbjct: 195 KRGYP 199
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 235 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 290
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 291 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 339
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 340 YLLFYE 345
>gi|410964963|ref|XP_003989022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Felis catus]
Length = 961
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKIVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGH+ + + + K+ G WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHFTEVIIFFIRYCFRKNKDD--GKWYYFDDSSV 892
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 893 STASEDQIVSKAAYVLFYQR 912
>gi|296212204|ref|XP_002752722.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Callithrix jacchus]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|291389467|ref|XP_002711348.1| PREDICTED: ubiquitin specific peptidase 15 isoform 2 [Oryctolagus
cuniculus]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVIVPKIGNI 502
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|281348175|gb|EFB23759.1| hypothetical protein PANDA_008289 [Ailuropoda melanoleuca]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKIVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|395852084|ref|XP_003798572.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Otolemur garnettii]
Length = 981
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLAKPMQYKVVVPKIGNI 502
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S E+++ AY+LFY++
Sbjct: 913 STASEEQIVSKAAYVLFYQR 932
>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
Length = 618
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 24/205 (11%)
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL-- 268
S ST ++ + + GL NLGNTCF NS++Q L +L+DY L L L
Sbjct: 261 SRSTSPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGH 319
Query: 269 ----TIALKKLFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
AL + FA +T + +V++P F I AP+F GY Q D+ E LR LL
Sbjct: 320 TSSAHTALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLL 379
Query: 322 DGLCSE--ELAFRKRNSPSEGNGISSNQG--PVFVDYV----------FGGQIASTVRCV 367
DGL +E +A R + SP + + + ++ Y+ F GQ+ S++ C
Sbjct: 380 DGLHNEVNRVAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCT 439
Query: 368 ECGHSSTVYEPFLDLSLPVPTKKAP 392
+CG+ STV++PF DLSLP+ + P
Sbjct: 440 DCGYCSTVFDPFWDLSLPIAKRGYP 464
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 500 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 555
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 556 LYAVSNHSGTTMGGHYTAYCR-----------SPVTGEWHTFNDSSVTPMSSSQVRTSDA 604
Query: 1035 YILFYE 1040
Y+ FYE
Sbjct: 605 YLFFYE 610
>gi|119617510|gb|EAW97104.1| ubiquitin specific peptidase 15, isoform CRA_a [Homo sapiens]
Length = 984
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 293 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 352
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 353 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 412
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 413 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 470
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 471 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 505
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 816 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 873
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 874 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 915
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 916 STASEDQIVSKAAYVLFYQR 935
>gi|440913379|gb|ELR62836.1| Ubiquitin carboxyl-terminal hydrolase 15 [Bos grunniens mutus]
Length = 983
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS Q L L +YFLN EL F PL + + K +AE +
Sbjct: 292 GLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 351
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 352 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 411
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 412 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 469
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 470 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 504
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 815 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 872
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 873 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 914
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 915 STASEDQIVSKAAYVLFYQR 934
>gi|53987037|gb|AAV27298.1| poly-histidine-tagged Usp2-cc [Ubiquitin protease vector pHUsp2-cc]
Length = 378
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 41 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 99
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 100 TSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPET 159
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 160 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 219
Query: 388 TKKAP 392
+ P
Sbjct: 220 KRGYP 224
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 260 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 315
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 316 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 364
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 365 YLLFYE 370
>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
caballus]
Length = 606
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSNAHTALMEEFAKLIQTIW 327
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNPEN 387
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 447
Query: 388 TKKAP 392
+ P
Sbjct: 448 KRGYP 452
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 488 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 543
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 592
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 593 YLLFYE 598
>gi|403413657|emb|CCM00357.1| predicted protein [Fibroporia radiculosa]
Length = 1285
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------------------TFGPLTIAL 272
GL N+GNTCF NS +Q L +L DYFL FG L L
Sbjct: 378 GLGNMGNTCFMNSALQCLAHTKELMDYFLTGVFEEELNPDNPLGMQGAIAQAFGAL---L 434
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
++++A T +PR F + APQF GYQQHDS EL+ LLDGL +
Sbjct: 435 QRIWATGSSSTSY----SPREFKQALQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVL 490
Query: 333 KR---NSPS-EGNGIS--------SNQG------PVFVDYVFGGQIASTVRCVECGHSST 374
K+ P EG G S QG V VD +F GQ ST+ C EC S
Sbjct: 491 KKPYVEKPDWEGGGDKELVGLANESWQGYMRRNDSVIVD-LFQGQYQSTLVCPECEKVSI 549
Query: 375 VYEPFLDLSLPVPTKK 390
++PF+ L+LP+P +K
Sbjct: 550 TFDPFMYLTLPLPIQK 565
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 31/152 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM------ 961
K + A KR + K P +L +HLKRFS ++R K++ V+F +++ P +
Sbjct: 937 KKHQQAMKRFDLWKVPDVLVVHLKRFS-NSRTLRDKIDTFVDFPINGLDISPMVGERQVA 995
Query: 962 -----------DPGCTDHDN-YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESV 1009
G +D D Y L V EHLG + GGHY AY +K
Sbjct: 996 QRLVEQGVDIAQLGLSDIDEPLIYDLYAVDEHLGGLGGGHYRAYAYNDTTDK-------- 1047
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
WYH D YV V E + AY+LFY++
Sbjct: 1048 ---WYHFDDSYVSPVQPEAAVNANAYLLFYKR 1076
>gi|410964961|ref|XP_003989021.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Felis catus]
Length = 990
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKIVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGH+ + + + K+ G WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHFTEVIIFFIRYCFRKNKDD--GKWYYFDDSSV 921
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 922 STASEDQIVSKAAYVLFYQR 941
>gi|426373275|ref|XP_004053535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Gorilla
gorilla gorilla]
Length = 898
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 207 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 266
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 267 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 326
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 327 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 384
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 385 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 419
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 730 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 787
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 788 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 829
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 830 STASEDQIVSKAAYVLFYQR 849
>gi|410919483|ref|XP_003973214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Takifugu
rubripes]
Length = 1001
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPET 283
GL+NLGNTCF NS +Q L S L +YFLN AE+ PL + + + +A+ +
Sbjct: 321 GLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINRENPLGMRGEIAEAYADLVKQM 380
Query: 284 GLR--NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------RN 335
L + + PRSF + APQF GYQQ DS ELL LLDGL + +K R+
Sbjct: 381 WLSRSSYVAPRSFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRD 440
Query: 336 SPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ + I + + + VD +F G ST+ C EC S ++PF L+LP+
Sbjct: 441 AEGRPDEIVAKEAWTNHRLRNDSIIVD-IFHGLFKSTLVCPECSKVSVTFDPFCYLTLPL 499
Query: 387 PTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
P KK + ++ P SR + ++ K G +
Sbjct: 500 PMKKDRTLEVFLVRSDPQSRPTQYRVVVPKLGTV 533
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V+F +N+ ++ DP +
Sbjct: 853 KKHQQATKKFDLWSLPRILVVHLKRFSYNRCWR-DKLDTVVDFPIRDLNMSEFVCDPKAS 911
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GGHY AY KNK K WY+ D V S
Sbjct: 912 P---YIYDLIAVSNHYGGMGGGHYTAY----GKNKADGK-------WYYFDDSSVSSASE 957
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 958 DQIVTKAAYVLFYQR 972
>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
melanoleuca]
gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
Length = 606
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSNVHTALMEEFAKLIQTIW 327
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNPEN 387
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 447
Query: 388 TKKAP 392
+ P
Sbjct: 448 KRGYP 452
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 488 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 543
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 592
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 593 YLLFYE 598
>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
lupus familiaris]
Length = 606
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSNVHTALMEEFAKLIQTIW 327
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNPEN 387
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 447
Query: 388 TKKAP 392
+ P
Sbjct: 448 KRGYP 452
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 488 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 543
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 592
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 593 YLLFYE 598
>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
Length = 605
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 327
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 387
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 447
Query: 389 KKAP 392
+ P
Sbjct: 448 RGYP 451
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSPSQVRTSD 590
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 591 AYLLFYE 597
>gi|335295001|ref|XP_003357373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Sus scrofa]
Length = 396
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSSAHTALMEEFAKLIQTIW 117
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R ++SP
Sbjct: 118 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSSPEG 177
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 178 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 237
Query: 388 TKKAP 392
+ P
Sbjct: 238 KRGYP 242
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + + ++ Y
Sbjct: 278 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREF---ASENINHAVYN 333
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 334 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVSPMSSSQVRTSDA 382
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 383 YLLFYE 388
>gi|291228611|ref|XP_002734273.1| PREDICTED: ubiquitin thioesterase 49-like [Saccoglossus kowalevskii]
Length = 667
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 16/150 (10%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
C+ S+ ++SK + +K +A+K++LI P +L +HLKRF R K+N HV+FS
Sbjct: 502 CDYCNSRRRRVSSKPI-IKTEASKQLLITTLPQVLRLHLKRFRWSGRMHREKINVHVDFS 560
Query: 953 EIINLRPYMDP--GCTDHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESV 1009
+ ++++P+ P GC D Y+Y L VV H G G GHY AY
Sbjct: 561 QRLDMKPFCSPSLGCEPLD-YEYDLAAVVIHHGRGFGSGHYTAYCWNAQ----------- 608
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
GG W H +D + S+E+V C+AYILFY
Sbjct: 609 GGFWVHCNDSRLDLCSIEDVTSCQAYILFY 638
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 267 PLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCS 326
PL L LF +G +++P + I P FKGY Q D+ E L LLD L +
Sbjct: 347 PLCHELHALFRVM--WSGKWAIVSPHAILSSIWRLIPSFKGYSQQDAQEFLCELLDKL-N 403
Query: 327 EELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
E+ F ++ N S + F GQ+ S V C+EC +S YEPF DLSL
Sbjct: 404 SEMHFAVSSTVVSPNPRSMLTPSEIISSSFQGQLVSQVTCLECLINSNTYEPFWDLSLEF 463
Query: 387 PTK 389
P +
Sbjct: 464 PER 466
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL 263
V GL NLGNTC+ NS++Q L + +++D FLN ++
Sbjct: 233 VTGLRNLGNTCYMNSILQVLGHIEKIRDCFLNLDM 267
>gi|338726451|ref|XP_001489901.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Equus
caballus]
Length = 901
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 210 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 269
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 270 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 329
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 330 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 387
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 388 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 422
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 733 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 790
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 791 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 832
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 833 STASEDQIVSKAAYVLFYQR 852
>gi|328788463|ref|XP_001121285.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 45-like [Apis
mellifera]
Length = 854
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 161/405 (39%), Gaps = 99/405 (24%)
Query: 50 CPHLDKGIDSDKISV---KIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKA 106
CPH+ K ++ +KI K+G S I C C KK K K + + A
Sbjct: 33 CPHIPKAVNFNKIKKCINKMGIS--IECSIC---------KKCKNNSSKTNEKECIMNSA 81
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQ---WENPHLRWCFPCNTL 160
I +CL CGH CG H + H ++ H +V++ W WCF C T
Sbjct: 82 ILICLQCGHQGCGREEC-----GHALEHYKKPHSDCHVMVVESLYWS----VWCFQCETK 132
Query: 161 IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSD 220
+ N + L E V+ IK +T I+S +V+ K T +
Sbjct: 133 V-------NIGCRKKLQETVEFIKKSTTSITSSQT------KMSVSQYQKETRTDADKLE 179
Query: 221 LDGNACYV--VRGLANLGNTCFFNSVMQNLLAMSQL-----------QDYFL-------- 259
+ N + V GL NLGNTCFFN+V+Q L L Q + L
Sbjct: 180 KEKNLYNLPKVGGLMNLGNTCFFNAVLQCLAQTPFLVKVLDDLRLPGQKFILPGGKHKFS 239
Query: 260 -NAELT-----------FGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKG 307
N+E +G T L K E + G R P K Q
Sbjct: 240 NNSEEVDLPPIEGTLEGWGSFTSILCKTLTEMQNTDG-RQSYRPSELLNSFKKKTMQCMD 298
Query: 308 YQQHDSHELLRCLLDGLCSE-----------ELAFRKRNSPSEG-----------NGISS 345
QHDSHELLR LL+ + +E E+ ++ +P EG G +
Sbjct: 299 GGQHDSHELLRHLLEIVRNEDLRRYQSIILKEVGLNEKTNP-EGVEESLKSRVKFYGNQA 357
Query: 346 NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
N + + VF G + ST+ C++C H+S EPFLDLSLPV K
Sbjct: 358 NSRLLGAELVFRGVLVSTLECLDCHHTSQNTEPFLDLSLPVMADK 402
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 90/187 (48%), Gaps = 45/187 (24%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
C + E KV++ N K+V +TK+ LI++ P +L +HLKRF Q R K+ HV+F
Sbjct: 675 CTANEKKVKQ-NCKMVCTP--STKQYLISRVPAVLILHLKRF-QAQRVDFRKVTRHVSFP 730
Query: 953 EIINLRPYMDPGCTDHDNYD-YRLVGVVEHLGTMRGGHYVAYVRGG-------------P 998
+++L P C +H Y L GVVEH GT+ GGHYVAY++ P
Sbjct: 731 ILLDLAPI----CKNHKKARIYALYGVVEHSGTIHGGHYVAYIKSRLPLTSDDPRWSFLP 786
Query: 999 KNKVKAKK-----------------------ESVGGVWYHASDVYVREVSLEEVLRCEAY 1035
+K + E G WYH SD V EV VL+ +AY
Sbjct: 787 SKDIKNTQENSYSSSSESETEEAAASPSSTVEPPPGKWYHVSDSRVTEVDETTVLQRQAY 846
Query: 1036 ILFYEKI 1042
+LFYE+I
Sbjct: 847 LLFYERI 853
>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
Length = 605
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 327
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 387
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 447
Query: 389 KKAP 392
+ P
Sbjct: 448 RGYP 451
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 590
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 591 AYLLFYE 597
>gi|417413225|gb|JAA52955.1| Putative ubiquitin carboxyl-terminal hydrolase 15, partial
[Desmodus rotundus]
Length = 951
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 260 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 319
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 320 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 379
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 380 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 437
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 438 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 472
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 783 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 840
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 841 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 882
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 883 STASEDQIVSKAAYVLFYQR 902
>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
Length = 605
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 327
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 387
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 447
Query: 389 KKAP 392
+ P
Sbjct: 448 RGYP 451
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSRQVRTSD 590
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 591 AYLLFYE 597
>gi|37674279|ref|NP_932759.1| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-45 [Mus
musculus]
gi|34874871|gb|AAQ83301.1| deubiquitinating enzyme Usp2-45 [Mus musculus]
gi|148693614|gb|EDL25561.1| ubiquitin specific peptidase 2, isoform CRA_b [Mus musculus]
Length = 396
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 117
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 118 TSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPET 177
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 178 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 237
Query: 388 TKKAP 392
+ P
Sbjct: 238 KRGYP 242
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 278 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 333
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 334 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 382
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 383 YLLFYE 388
>gi|402886701|ref|XP_003906762.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial
[Papio anubis]
Length = 917
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 226 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 285
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 286 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 345
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 346 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 403
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 404 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 438
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 749 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 806
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 807 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 848
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 849 STASEDQIVSKAAYVLFYQR 868
>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
troglodytes]
Length = 605
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 327
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 387
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 447
Query: 389 KKAP 392
+ P
Sbjct: 448 RGYP 451
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 590
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 591 AYLLFYE 597
>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
Length = 411
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 74 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 132
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 133 TSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPET 192
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 193 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 252
Query: 388 TKKAP 392
+ P
Sbjct: 253 KRGYP 257
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 293 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 348
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 349 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 397
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 398 YLLFYE 403
>gi|30584279|gb|AAP36388.1| Homo sapiens ubiquitin specific protease 2 [synthetic construct]
gi|60652721|gb|AAX29055.1| ubiquitin specific protease 2 [synthetic construct]
Length = 606
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 327
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 387
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 447
Query: 389 KKAP 392
+ P
Sbjct: 448 RGYP 451
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 590
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 591 AYLLFYE 597
>gi|27371223|gb|AAH41366.1| USP2 protein [Homo sapiens]
gi|119587890|gb|EAW67486.1| ubiquitin specific peptidase 2, isoform CRA_c [Homo sapiens]
Length = 362
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 84
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 85 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 144
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 145 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 204
Query: 389 KKAP 392
+ P
Sbjct: 205 RGYP 208
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 244 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 299
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 300 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 347
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 348 AYLLFYE 354
>gi|3386550|gb|AAC28392.1| ubiquitin-specific protease UBP41 [Homo sapiens]
Length = 353
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 16 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 75
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 76 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 135
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 136 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 195
Query: 389 KKAP 392
+ P
Sbjct: 196 RGYP 199
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 235 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 290
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R G W+ +D V +S +V +A
Sbjct: 291 LYAVSNHSGTTMGGHYTAYCRSPGT-----------GEWHTFNDSSVTPMSSSQVRTSDA 339
Query: 1035 YILFYE 1040
Y+ FYE
Sbjct: 340 YLHFYE 345
>gi|344313155|ref|NP_001230688.1| ubiquitin carboxyl-terminal hydrolase 2 isoform c [Homo sapiens]
Length = 362
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 84
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 85 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 144
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 145 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 204
Query: 389 KKAP 392
+ P
Sbjct: 205 RGYP 208
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 244 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 299
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 300 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 347
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 348 AYLLFYE 354
>gi|297813507|ref|XP_002874637.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297320474|gb|EFH50896.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 913
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 91/195 (46%), Gaps = 43/195 (22%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIA----LKK 274
+ GL+NLGNTCF NS +Q L + DYFL N G L IA LKK
Sbjct: 299 LAGLSNLGNTCFMNSALQCLAHTPPIVDYFLQDYSDDINRDNPLGMCGELAIAFGDLLKK 358
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
L++ RN + PRSF + APQF GY QHDS ELL LLDGL E+L KR
Sbjct: 359 LWSS-------RNAVAPRSFKTKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNKVKR 410
Query: 335 NSPSE----------------GNGISSNQGPVFVDY-----VFGGQIASTVRCVECGHSS 373
E N + V V+ F GQ ST+ C CG S
Sbjct: 411 KPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVNVCQVFDFFQGQYKSTLVCPVCGKIS 470
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LS+P+P+
Sbjct: 471 ITFDPFMYLSVPLPS 485
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF + ++L Y+ +
Sbjct: 776 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYLKNKIDTFVNFPIQDLDLSKYVKN--KN 832
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L + H G + GGHY AY + NK WYH D +V V+
Sbjct: 833 GQSYLYELYAISNHYGGLGGGHYTAYAKLIDDNK-----------WYHFDDSHVSSVNES 881
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY ++
Sbjct: 882 EIKNSAAYVLFYRRV 896
>gi|426224801|ref|XP_004006557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Ovis
aries]
Length = 952
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQDELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>gi|426224799|ref|XP_004006556.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Ovis
aries]
Length = 981
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQDELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>gi|149066661|gb|EDM16534.1| ubiquitin specific peptidase 15, isoform CRA_c [Rattus norvegicus]
Length = 654
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 107/217 (49%), Gaps = 36/217 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 40 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 99
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + + PR+F + APQF GYQQ D ELL LLDGL E+L R R P
Sbjct: 100 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL-HEDLN-RIRKKPYIQL 157
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
++G N + N + VD +F G ST+ C EC S ++PF L+
Sbjct: 158 KDADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLT 215
Query: 384 LPVPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
LP+P KK S + P ++ + K+ K G I
Sbjct: 216 LPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 252
Score = 43.1 bits (100), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 563 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 620
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGH 989
P C Y L+ V H G M GGH
Sbjct: 621 GP-CR------YNLIAVSNHYGGMGGGH 641
>gi|348678861|gb|EGZ18678.1| hypothetical protein PHYSODRAFT_346365 [Phytophthora sojae]
Length = 1168
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 97/202 (48%), Gaps = 34/202 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFG------------PL----TIAL 272
V GL NLGNTCF NS++Q L+ + L+DYFL + G PL +A+
Sbjct: 531 VVGLRNLGNTCFMNSMLQCLINTAPLRDYFLEKDPETGSPFFTKEINRHNPLGMKGIMAV 590
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELA 330
+ K +G V+ P S I APQF GYQQ DS EL+ LLDGL + +
Sbjct: 591 EFASLLRKIWSGEFTVVAPTSLKSVIGQYAPQFAGYQQQDSQELMNFLLDGLHEDLNRVK 650
Query: 331 FRKRNSPSEGNG-------------ISSNQGPVFVDYVFGGQIASTVRCV--ECGHSSTV 375
+ P E NG + VD F GQ+ S V C +CG+ S
Sbjct: 651 TKPYTKPVERNGREDPEVAQEEWQQFVRRNNSIIVDN-FMGQLRSHVTCSNPDCGNESIT 709
Query: 376 YEPFLDLSLPVPTKKAPSKKTQ 397
++P+++LS+P+P K+ + + Q
Sbjct: 710 FDPYMNLSVPIPNKETVTVQVQ 731
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
Query: 914 ATKRVLINKAPPILTIHLKRF--SQDA----RGRLSKLNGHVNFS-EIINLRPYMDPGCT 966
A K+ + P +L HLKRF +Q++ R ++S L V F E ++L ++ G
Sbjct: 1045 AFKKFDLFSLPKVLIFHLKRFRYAQNSFYMHRDKISTL---VEFPVEGLDLSEFVI-GPQ 1100
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y L V EH+G + GGHY A K V W++ +D + E S
Sbjct: 1101 NGSEPIYDLFAVSEHMGGLGGGHYTA-----------VAKNPVNECWFNFNDSHTSEASA 1149
Query: 1027 EEVLRCEAYILFY 1039
E+ + AY+LFY
Sbjct: 1150 EDAVSSRAYVLFY 1162
>gi|326929002|ref|XP_003210661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Meleagris gallopavo]
Length = 758
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 159/410 (38%), Gaps = 44/410 (10%)
Query: 12 AAAKQKQAAARAPKSVLQQSKPVESTDDG-------VPVMKERKPCPHLDKGIDSDKISV 64
A A+ + RA +S ++ V S G VPV + C HL +G V
Sbjct: 192 AGARPNGSPVRAVRSSTRRPARVASAPLGCSRGSVLVPVTGMCRNCSHLGRGRPEMGKRV 251
Query: 65 KIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLP 124
K+G SDP K K G+ L + CL C + C
Sbjct: 252 KVGRSDPTVLLLALSEHAALGAKVAKSCICHMCGAHL---NRLHSCLYCVFFGC------ 302
Query: 125 TTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIK 184
+ H+ HA+ RH L I + +CF C I + E+ K+ + KL
Sbjct: 303 -FTKKHIHEHAKTKRHNLAIDLLYGGI-YCFMCQDYIYDKDMEQIA--KEEQRKAWKLQA 358
Query: 185 GRSTEISSVDVEDAWFGSGNVNSE-IKSESTVVSGS----DLDGNACYVVRGLANLGNTC 239
T +S G E K E ++ + + N +RGL NLGNTC
Sbjct: 359 FTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTC 418
Query: 240 FFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPETGLRNVINPRS 293
F N ++Q L L+D+FL+ + L + LF E +G R+ P
Sbjct: 419 FMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEF--YSGHRSPHIPYR 476
Query: 294 FFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPV 350
+ + A GY+Q D+HE L LD L C + +K N+P+ N I
Sbjct: 477 LLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCI------- 529
Query: 351 FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
+D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 530 -IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 578
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 623 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 681
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R + K + W+ D
Sbjct: 682 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIR-------QHKDQ-----WFKCDD 729
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 730 AIITKASIKDVLDSEGYLLFYHK 752
>gi|297846262|ref|XP_002891012.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297336854|gb|EFH67271.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 894
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 91/189 (48%), Gaps = 30/189 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFG---PLTIALKKLFAETK 280
GL NLGNTCF NS +Q L + +YFL NAE G L IA +L K
Sbjct: 296 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYSSDINAENPLGMRGELAIAFGELL--RK 353
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
+ +N + PR+F + APQF GY QHDS E+L LLDGL E+L KR E
Sbjct: 354 LWSSGQNAVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGL-HEDLNKVKRKPYIEA 412
Query: 341 NGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ V VD V GQ ST+ C +CG S ++PF+ LSL
Sbjct: 413 KDSDGRPDDEVAEEKWKYHKARNDSVIVD-VCQGQYKSTLVCPDCGKISITFDPFMYLSL 471
Query: 385 PVPTKKAPS 393
P+P+ + S
Sbjct: 472 PLPSSRTRS 480
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ D
Sbjct: 762 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYFKNKIDTLVNFPIHGLDLSKYV--TNKD 818
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L + H G + GGHY AY + +NK WY D V V+
Sbjct: 819 GQSYLYELYAISNHYGGLGGGHYTAYAKLMDENK-----------WYDFDDSRVSAVNEY 867
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY+++
Sbjct: 868 EIKTPAAYVLFYQRV 882
>gi|344243312|gb|EGV99415.1| Ubiquitin carboxyl-terminal hydrolase 15 [Cricetulus griseus]
Length = 870
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 93/188 (49%), Gaps = 27/188 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 207 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 266
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 267 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 326
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 327 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 384
Query: 386 VPTKKAPS 393
+P KK S
Sbjct: 385 LPMKKERS 392
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 702 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 759
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 760 GP-CL------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 801
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 802 STASEDQIVSKAAYVLFYQR 821
>gi|426370762|ref|XP_004052330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Gorilla gorilla
gorilla]
Length = 355
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 84
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 85 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 144
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 145 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 204
Query: 389 KKAP 392
+ P
Sbjct: 205 RGYP 208
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 63/127 (49%), Gaps = 25/127 (19%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 244 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 299
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D +V +
Sbjct: 300 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDS-------SQVRTSD 340
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 341 AYLLFYE 347
>gi|28565285|ref|NP_741994.1| ubiquitin carboxyl-terminal hydrolase 2 isoform b [Homo sapiens]
gi|410045962|ref|XP_003952100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan
troglodytes]
gi|24943173|gb|AAN65363.1|AF440755_1 ubiquitin specific protease 2b [Homo sapiens]
gi|119587888|gb|EAW67484.1| ubiquitin specific peptidase 2, isoform CRA_a [Homo sapiens]
gi|158257942|dbj|BAF84944.1| unnamed protein product [Homo sapiens]
gi|167887742|gb|ACA06096.1| ubiquitin carboxyl-terminal hydrolase 2 variant 2 [Homo sapiens]
Length = 396
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 118
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 119 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 178
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 179 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 238
Query: 389 KKAP 392
+ P
Sbjct: 239 RGYP 242
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 278 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 333
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R G W+ +D V +S +V +A
Sbjct: 334 LYAVSNHSGTTMGGHYTAYCRSPGT-----------GEWHTFNDSSVTPMSSSQVRTSDA 382
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 383 YLLFYE 388
>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
Length = 393
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 56 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 114
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 115 TSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPET 174
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 175 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 234
Query: 388 TKKAP 392
+ P
Sbjct: 235 KRGYP 239
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 275 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 330
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 331 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 379
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 380 YLLFYE 385
>gi|148692493|gb|EDL24440.1| ubiquitin specific peptidase 15, isoform CRA_b [Mus musculus]
Length = 663
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 107/217 (49%), Gaps = 36/217 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 39 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 98
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + + PR+F + APQF GYQQ D ELL LLDGL E+L R R P
Sbjct: 99 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL-HEDLN-RIRKKPYIQL 156
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
++G N + N + VD +F G ST+ C EC S ++PF L+
Sbjct: 157 KDADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLT 214
Query: 384 LPVPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
LP+P KK S + P ++ + K+ K G I
Sbjct: 215 LPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 251
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 562 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 619
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGH 989
P C Y L+ V H G M GGH
Sbjct: 620 GP-CR------YNLIAVSNHYGGMGGGH 640
>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
Length = 607
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 270 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSNAHTALMEEFAKLIQTIW 328
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 329 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTARPKSNPEN 388
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 389 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 448
Query: 388 TKKAP 392
+ P
Sbjct: 449 KRGYP 453
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 489 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 544
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R G W+ +D V +S +V +A
Sbjct: 545 LYAVSNHSGTTMGGHYTAYCRS-----------PATGEWHTFNDSSVTAMSSSQVRTSDA 593
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 594 YLLFYE 599
>gi|340368234|ref|XP_003382657.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Amphimedon
queenslandica]
Length = 884
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKP--------E 282
GL+NLGNTCF NS +Q L L +YF+ E G KK P E
Sbjct: 308 GLSNLGNTCFMNSALQCLGNTKPLVEYFIGKE---GEAEKPYKKHINRNNPLGMGGVIAE 364
Query: 283 T----------GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
T G + + PR F I APQF GY QHDSHELL LLDGL E+L
Sbjct: 365 TYGSLLDEMWNGQNSYLAPRQFKNIIGRHAPQFSGYSQHDSHELLAFLLDGL-HEDLNLV 423
Query: 333 KR------NSPSEGNGISSNQGPVFVDY----------VFGGQIASTVRCVECGHSSTVY 376
K+ + ++G + ++ Y +F GQ+ ST+ C +C S ++
Sbjct: 424 KKKPYVDMDIKTDGRDDNDIARETWLKYLQRNQSVIVRLFQGQLKSTLHCPKCDKESRIF 483
Query: 377 EPFLDLSLPVPT 388
+PF+ LSLP+P
Sbjct: 484 DPFMYLSLPLPV 495
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYD 972
A+K+ + K P IL IHLKRFS + R +K+ V F E ++L Y+ YD
Sbjct: 707 ASKKFDLWKMPEILVIHLKRFSYNRYFR-NKIESKVEFPLENLDLSDYVVNQEEPQPLYD 765
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
L V H G + GGHY AY KNK K WY D +V E S E +
Sbjct: 766 --LFAVSNHFGGLGGGHYTAYA----KNKDNGK-------WYSFDDSHVSEASPESICSS 812
Query: 1033 EAYILFYEK 1041
+Y+LFY++
Sbjct: 813 ASYLLFYQR 821
>gi|357145636|ref|XP_003573712.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Brachypodium distachyon]
Length = 931
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 87/185 (47%), Gaps = 28/185 (15%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFG---PLTIALKKLFAE 278
+ GL NLGNTCF NS +Q L+ L YFL N E G L +A L
Sbjct: 312 LSGLHNLGNTCFMNSAIQALVHTPPLVQYFLKDYSQEINTENPLGLQGELAVAFGDLLQ- 370
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR---- 334
K + R + PR+F + APQF GY QHDS ELL LLDGL + +K+
Sbjct: 371 -KLWSAGRTSVPPRAFKSKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKKPYIE 429
Query: 335 -----NSPSE------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P E N + + VD F GQ ST+ C EC S ++PF+ LS
Sbjct: 430 AKDADGRPEEEFAEECWNNHKARNDSIIVD-KFQGQYKSTLVCPECNKISVTFDPFMYLS 488
Query: 384 LPVPT 388
LP+P+
Sbjct: 489 LPLPS 493
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 24/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K R A K++ + + P IL +HLKRFS +R +KL+ +V F P D + +
Sbjct: 789 KEHRQARKKLDLWRLPEILVVHLKRFSY-SRYMKNKLDTYVTF-------PIHDLDMSKY 840
Query: 969 DNYD-----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVRE 1023
+ Y L V+ H G + GGHY AY + ++ES WYH D +V
Sbjct: 841 AKHTSGPPIYELYAVINHYGGLGGGHYSAYAK-------LVEEES----WYHFDDSHVSS 889
Query: 1024 VSLEEVLRCEAYILFYEKI 1042
++ EE AY+LFY +I
Sbjct: 890 INEEETRTSAAYLLFYRRI 908
>gi|114794332|pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin
Length = 359
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 11 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 70
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 71 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 130
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 131 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 190
Query: 389 KKAP 392
+ P
Sbjct: 191 RGYP 194
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 230 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 285
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R G W+ +D V +S +V +A
Sbjct: 286 LYAVSNHSGTTMGGHYTAYCRSPGT-----------GEWHTFNDSSVTPMSSSQVRTSDA 334
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 335 YLLFYE 340
>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
Length = 605
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLHHSSNAHTALMEEFAKLIQTIW 326
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 327 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPEN 386
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 387 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 446
Query: 388 TKKAP 392
+ P
Sbjct: 447 KRGYP 451
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 590
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 591 AYLLFYE 597
>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 34/195 (17%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYF-----------------LNAELTFGPLTIA 271
V GL NLGNTCF NSV+Q+L + + YF + + T + +
Sbjct: 231 VVGLRNLGNTCFMNSVLQSLSNIQEFSCYFNTMPALEMKHKQKAYHSRSMKETMDDVFVV 290
Query: 272 --LKK-LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE- 327
L+K L ++ G ++ I+P F I PQF+G++QHD+HE LR +LD L +E
Sbjct: 291 EELRKVLLNLSQGGDGSKSAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTEL 350
Query: 328 -ELAF---------RKRNSPSEGNGISSNQGP---VFVDYVFGGQIASTVRCVECGHSST 374
+++F + +P +G+S Q V VFGG + S VRC+ CG S
Sbjct: 351 QQVSFPVELGGPKSGEHKNPYNVSGLSHLQAKGRNSIVTNVFGGVLQSEVRCLICGMESK 410
Query: 375 VYEPFLDLSLPVPTK 389
++PFLDLSL +P K
Sbjct: 411 KHDPFLDLSLDIPEK 425
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 892 NCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+C S ++VEE+ + K K+ +TKR I + P +L +H+KRF + R +K+
Sbjct: 453 DCLSSFTEVEELAETELYYCNSCKCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYR-TKI 511
Query: 946 NGHVNF--------SEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGG 997
+ + F ++N P + + YD V +V H GHY ++
Sbjct: 512 DLRIAFPINALDMSQFVLNNGPETRRSNSSCNIYDLAAV-IVHHGNGSSCGHYTSFAINN 570
Query: 998 PKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
GVW H +D V+EVS V C+ YILFY K
Sbjct: 571 -------------GVWMHFNDHTVKEVSSTAVAECKPYILFYIK 601
>gi|118138325|pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex
Length = 374
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 37 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 96
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 97 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 156
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 157 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 216
Query: 389 KKAP 392
+ P
Sbjct: 217 RGYP 220
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 256 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 311
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 312 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 359
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 360 AYLLFYE 366
>gi|430800750|pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated
Ubiquitin
gi|430800752|pdb|3V6E|A Chain A, Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
Length = 367
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 30 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 89
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 90 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 149
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 150 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 209
Query: 389 KKAP 392
+ P
Sbjct: 210 RGYP 213
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 249 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 304
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 305 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 352
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 353 AYLLFYE 359
>gi|350596285|ref|XP_001925564.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial
[Sus scrofa]
Length = 495
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 102 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 161
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 162 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 221
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 222 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 279
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 280 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 314
>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cricetulus griseus]
gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cricetulus griseus]
gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
[Cricetulus griseus]
Length = 613
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSNAHTALMEEFAKLIQTIW 334
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R + SP
Sbjct: 335 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKPSPEN 394
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 395 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 454
Query: 388 TKKAP 392
+ P
Sbjct: 455 KRGYP 459
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
+ ++ K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+
Sbjct: 488 RARKRCIKKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TN 545
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
H Y+ L V H GT GGHY AY R V G W+ +D V +S
Sbjct: 546 HAVYN--LYAVSNHSGTTMGGHYTAYCR-----------SPVTGEWHTFNDSSVTPMSSS 592
Query: 1028 EVLRCEAYILFYE 1040
+V +AY+LFYE
Sbjct: 593 QVRTSDAYLLFYE 605
>gi|301103855|ref|XP_002901013.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262101351|gb|EEY59403.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 1100
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 94/202 (46%), Gaps = 34/202 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL----------TIALKKLFAE 278
V GL+NLGNTCF NS++Q L+ + L++YFL G L + +K + A
Sbjct: 466 VVGLSNLGNTCFMNSMLQCLINTAPLREYFLKKVPETGTLCFTKEINRDNPLGMKGIMAV 525
Query: 279 ------TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELA 330
K + V+ P I APQF GYQQ DS EL+ LLDGL + +
Sbjct: 526 DFASLLRKMWSNEFKVVTPTKLKSVIGQYAPQFAGYQQQDSQELMNFLLDGLHEDLNRVK 585
Query: 331 FRKRNSPSEGNGIS-------------SNQGPVFVDYVFGGQIASTVRC--VECGHSSTV 375
+ P E NG S V VD F GQ+ S V C +CGH S
Sbjct: 586 AKPYTKPVERNGRSDADVAREEWQQFLRRNDSVIVDN-FMGQLRSHVTCSDADCGHESVT 644
Query: 376 YEPFLDLSLPVPTKKAPSKKTQ 397
++P++ LS+P+P +A + Q
Sbjct: 645 FDPYMSLSVPIPNNEAVGVQVQ 666
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRF--SQDA----RGRLSKLNGHVNFS-EIINLRPYM-DPGC 965
A K+ + P +L HLKRF +Q++ R ++S L V F + ++L ++ P
Sbjct: 977 AFKKFDLFSLPKVLIFHLKRFRYAQNSFYMHRDKISTL---VEFPVQELDLAEFVVGPDS 1033
Query: 966 TDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
YD L V EH+G + GGHY A K V W+ +D + +
Sbjct: 1034 GSARLYD--LYAVSEHMGGLGGGHYTA-----------VAKNPVNRRWFDFNDSHTSATT 1080
Query: 1026 LEEVLRCEAYILFY 1039
++ + +AY+LFY
Sbjct: 1081 AQDAVSAKAYVLFY 1094
>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 462
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 31/194 (15%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE------LTFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y L+ E T + +L K F+ E
Sbjct: 121 LNGLKNIGNTCFMNSVLQCLSNTKPLLEYLLHEEYMTDINFTISAMKGSLIKAFSNVIQE 180
Query: 283 TGLRN----VINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS 338
N +IN +F I AP+F GY Q D+ E LR LL+GL E R P
Sbjct: 181 LWAPNAEDKIINTTNFKSQIQKFAPRFMGYAQQDAQEFLRYLLEGL--HEDVNRVTVKPQ 238
Query: 339 E-----GNGISSNQGPV-------------FVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
+ + +S NQ VD +F GQ+ ST++C CGH S ++PF
Sbjct: 239 QILTDIDDSLSDNQKATEAWKRYLRMDDSKVVD-IFVGQLKSTLQCTVCGHCSVTFDPFW 297
Query: 381 DLSLPVPTKKAPSK 394
DLSLPVP++ K
Sbjct: 298 DLSLPVPSRTGQPK 311
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 64/136 (47%), Gaps = 22/136 (16%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYM---DPG 964
+ +R TK I K P IL +HLKRFS R R KL+ V+F ++L PY G
Sbjct: 337 ETRRKCTKSFSIQKFPKILVLHLKRFSPTERYR-GKLSITVDFPLTNLDLSPYAANKGQG 395
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
CT Y L + H GT GGHY AY K G W+ +D V +
Sbjct: 396 CT------YNLYAISNHSGTAYGGHYTAYC-----------KHPYSGNWHEYNDSRVSSL 438
Query: 1025 SLEEVLRCEAYILFYE 1040
S V+ EAY+LFYE
Sbjct: 439 SSRSVVSGEAYVLFYE 454
>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
Length = 605
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLHHSSNAHTALMEEFAKLIQTIW 326
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 327 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPEN 386
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 387 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 446
Query: 388 TKKAP 392
+ P
Sbjct: 447 KRGYP 451
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 590
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 591 AYLLFYE 597
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 151/340 (44%), Gaps = 59/340 (17%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQW-------ENPHLRWCFP 156
+K+ W+CL C CG H +H +T+ V Q E H C
Sbjct: 35 NKSPWICLTCLMVHCG-----RYVNGHAKKHFEETQAVGVSQRKSDKQDKEKYHHSVCMD 89
Query: 157 CNTL-IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTV 215
C++ + + ++ N L +V K+ + + S++ + G+ + K + ++
Sbjct: 90 CSSYSVFCYRCDDFVVNDTKLGQVQKVRE----HLQSLE---NFALMGDRQRKRKFQESL 142
Query: 216 VSGSDL----DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------------- 258
+ S L DG A GL NLGNTCF N+++Q+L + Q YF
Sbjct: 143 SADSKLMKDNDGIAVGAT-GLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLRSGKT 201
Query: 259 ----LNAELTFGPLTIALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHD 312
+ + G +++L + F +T G + +P S F I P F+GYQQ D
Sbjct: 202 AGRRMYHTRSQGDSSVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGYQQQD 261
Query: 313 SHELLRCLLDGLCSEELAFRKRN-----SPSEGNGISSNQGPV-------FVDYVFGGQI 360
+HE +R LLD L EL + + SP +G +S+ G V +FGG +
Sbjct: 262 AHEFMRYLLDHL-HRELQYGRNGASHAASPQDGVRLSAADGKCCINGTASVVTSIFGGIL 320
Query: 361 ASTVRCVECGHSSTVYEPFLDLSLPVPT--KKAPSKKTQP 398
+ V C+ CG S ++PFLDLSL +P+ ++ SK +P
Sbjct: 321 QNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEP 360
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K ++ +TK+ + K P +L +HLKRF A R +K++ +V F + +++R Y+ +P +
Sbjct: 391 KKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLR-NKIDTYVEFPLKGLDMRGYLLEPENS 449
Query: 967 DHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
++ Y LV VV H G+ G GHY AY S G WYH +D V +
Sbjct: 450 LPESCVYDLVAVVVHHGSGVGSGHYTAY-------------GSHEGCWYHFNDSTVTLTN 496
Query: 1026 LEEVLRCEAYILFY 1039
+ V + +AYILFY
Sbjct: 497 EDAVRKAKAYILFY 510
>gi|47211964|emb|CAF96183.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKPE- 282
GL+NLGNTCF NS +Q L + L +YFL + T PL + + + +AE +
Sbjct: 221 GLSNLGNTCFMNSAVQCLSNIPPLTEYFLKDKYTDELNEDNPLGMKGEIARAYAELIKQI 280
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + + PR F + APQF GYQQ DSHELL LLDGL E+L R R P
Sbjct: 281 WSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGL-HEDLN-RIRKKPYIQL 338
Query: 338 SEGNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ NG I N + VD +F G ST+ C C S ++PF L+
Sbjct: 339 KDANGRPDKVVAEEAWENHIKRNDS-IIVD-IFHGLFKSTLVCPVCFKVSVTFDPFCYLT 396
Query: 384 LPVPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
LP+P KK + + P ++ + KL K G I
Sbjct: 397 LPLPMKKERTLEVYLVRLDPLAKPTQYKLTVPKVGYI 433
>gi|353232905|emb|CCD80260.1| ubiquitin-specific peptidase 45 (C19 family) [Schistosoma mansoni]
Length = 748
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 94/207 (45%), Gaps = 54/207 (26%)
Query: 229 VRGLANLGNTCFFNSVMQ---------NLLAMSQLQDYFL-------------NAELTFG 266
V+GL NLGNTC+ N+ +Q NLL + + ++ L + L
Sbjct: 34 VKGLHNLGNTCYLNAALQCLAKSPWLLNLLVVDESRESALTKPNGDSLCTLCVSLPLMKC 93
Query: 267 PLTIALKKLFAETKP------ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
PLT K+L + KP + N I+P F + P+F G++QHDSHEL+R L
Sbjct: 94 PLTTQFKELISVLKPGELSNTKMSSSNTISPGMFRNVFIERCPRFSGFRQHDSHELIRAL 153
Query: 321 LDGLCSEELAFRKRNSPSEGNGISSNQGP---------------------VFVDYVFGGQ 359
LD L EEL+ K+ G + N P VD +FGG
Sbjct: 154 LDCLKQEELSRWKK-----GILLKLNVNPKDVRDDEKESIRSWGKAASIATIVDRLFGGI 208
Query: 360 IASTVRCVECGHSSTVYEPFLDLSLPV 386
+ ST++C CG +EPFLDLSL V
Sbjct: 209 LVSTIQCCCCGTVRPKFEPFLDLSLSV 235
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 17/136 (12%)
Query: 874 SGYSAEKVYQSDSQLVAGNCESEESKVEEINSKI--------------VKVKRDATKRVL 919
S Y++ ++ ++L+ C ++S ++E++S + + +D KR L
Sbjct: 481 SKYTSAELLTGSNRLICDVCTKQKS-LDELDSNLDSKSMDKQTPNNNKPDILQDTIKRDL 539
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDP-GCTDHDNYDYRLVGV 978
I K PPILTIHLKRF Q +L K ++F +++ P+ T + YRL GV
Sbjct: 540 IYKPPPILTIHLKRFQQ-VGFQLRKSQKRIHFPIYLDITPFCSVLAVTRSNQIRYRLYGV 598
Query: 979 VEHLGTMRGGHYVAYV 994
+EH G + GHYVAYV
Sbjct: 599 IEHTGHLTSGHYVAYV 614
Score = 43.5 bits (101), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W++ SD +V VS VL C+AY+LFYE+I
Sbjct: 718 WFYCSDSHVTRVSQSTVLNCQAYVLFYERI 747
>gi|196001277|ref|XP_002110506.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
gi|190586457|gb|EDV26510.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
Length = 477
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 142/306 (46%), Gaps = 54/306 (17%)
Query: 108 WVCLGCGHYACGGVGLPTTPQSHVVRHARQ-TRHPLVIQWENPHLR-WCFPCNTLIPVEK 165
W+CL CG+ +CG + H +H +H L + +P +C+ C+ I +
Sbjct: 37 WICLSCGNISCGRY-----VKGHAKKHYEDLNQHCLCL---DPAFAVYCYSCDEYI-IND 87
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
+E+N ++ K+ + + ++ DA + N++S +K +V+ + +
Sbjct: 88 SEDN--------KIQKIRDQLQSNLERLNKIDAKRYAKNISS-LKIVPSVLFI--IVSTS 136
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIA--LKKLFAETKPET 283
Y + GL NLGNTC+ N+++Q+L + YF TF LT + K+ A
Sbjct: 137 AYQILGLKNLGNTCYLNAILQSLSNIDPFCRYFK----TFRSLTDSDPRKEKHAHNTRAQ 192
Query: 284 G--------LRNVIN------------PRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
G LR V++ P SF IC P+F+GY Q D+HE +R LLD
Sbjct: 193 GDNVCIVDELRKVLDGLGEISSSSYYSPNSFLTAICKLIPRFRGYHQQDAHEFMRYLLDR 252
Query: 324 LCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
L +E + +P GN SN V +F G + + V C+ C +S + FLDLS
Sbjct: 253 LHTE---LGRMRAPYYGNKQVSN---TIVTTLFRGSLLNEVNCLVCDINSRKTDSFLDLS 306
Query: 384 LPVPTK 389
L +P++
Sbjct: 307 LDIPSE 312
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 89/186 (47%), Gaps = 33/186 (17%)
Query: 856 ESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDAT 915
+SI D D C + SS EK+ DS+L C S K+ +T
Sbjct: 319 KSIGDNDISICKLTDCLSSFTELEKL--EDSELYY--CSS------------CTKKQLST 362
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTDHDNYDYR 974
K++ I P +L +HLKRF + R KL+ +V F I ++++PY+ T + Y
Sbjct: 363 KQLRIKTLPRVLCLHLKRFRWSSCIR-KKLDIYVEFPMIGLDMKPYLTLKQTSNGRSMYD 421
Query: 975 LVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCE 1033
L+ VVEH G+ G GHY AY A K+ WYH +D V E V++C+
Sbjct: 422 LIAVVEHHGSGYGSGHYTAY----------AYKDG----WYHFNDSTVSVAMEEHVIKCK 467
Query: 1034 AYILFY 1039
AYILFY
Sbjct: 468 AYILFY 473
>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
Length = 396
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 117
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 118 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSPES 177
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 178 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 237
Query: 388 TKKAP 392
+ P
Sbjct: 238 KRGYP 242
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 278 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 333
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 334 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 382
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 383 YLLFYE 388
>gi|322801296|gb|EFZ21983.1| hypothetical protein SINV_10772 [Solenopsis invicta]
Length = 886
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 92/194 (47%), Gaps = 26/194 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y LN + T + AL K F++ E
Sbjct: 546 LNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHE 605
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G +V+N + I AP+F GY Q D+ E LR LL+GL + + P
Sbjct: 606 LWEVGGDHVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIH 665
Query: 340 GNGISS----------------NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
G+ S ++ VD VF GQ+ S++RC C H S +PF DLS
Sbjct: 666 GDIPDSYTDMQKAVESWKRYLRSEDSTIVD-VFVGQLRSSLRCTSCDHVSVTLDPFWDLS 724
Query: 384 LPVPTKKAPSKKTQ 397
LP+P + K +Q
Sbjct: 725 LPIPARSGTVKLSQ 738
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMD---PG 964
+++R TK I K P IL IHLKRFS R R KLN V+F ++L + PG
Sbjct: 761 QMRRKCTKSFSIQKFPKILVIHLKRFSPMERFR-GKLNVMVDFPLTGLDLSAFAAPRVPG 819
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
CT Y L GV H GT GHY AY K G W+ +D V V
Sbjct: 820 CT------YNLYGVANHSGTTYSGHYTAYC-----------KHPYSGEWHEYNDSRVSVV 862
Query: 1025 SLEEVLRCEAYILFYEK 1041
S V+ EAY+LFYE+
Sbjct: 863 SSRSVVSSEAYVLFYEQ 879
>gi|256084758|ref|XP_002578593.1| ubiquitin-specific peptidase 16 (C19 family) [Schistosoma mansoni]
Length = 622
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 109/242 (45%), Gaps = 55/242 (22%)
Query: 229 VRGLANLGNTCFFNSVMQ---------NLLAMSQLQDYFL-------------NAELTFG 266
V+GL NLGNTC+ N+ +Q NLL + + ++ L + L
Sbjct: 34 VKGLHNLGNTCYLNAALQCLAKSPWLLNLLVVDESRESALTKPNGDSLCTLCVSLPLMKC 93
Query: 267 PLTIALKKLFAETKP------ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
PLT K+L + KP + N I+P F + P+F G++QHDSHEL+R L
Sbjct: 94 PLTTQFKELISVLKPGELSNTKMSSSNTISPGMFRNVFIERCPRFSGFRQHDSHELIRAL 153
Query: 321 LDGLCSEELAFRKRNSPSEGNGISSNQGP---------------------VFVDYVFGGQ 359
LD L EEL+ K+ G + N P VD +FGG
Sbjct: 154 LDCLKQEELSRWKK-----GILLKLNVNPKDVRDDEKESIRSWGKAASIATIVDRLFGGI 208
Query: 360 IASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIRAKG 419
+ ST++C CG +EPFLDLSL V ++ SK+ S +K+ S ++R +
Sbjct: 209 LVSTIQCCCCGTVRPKFEPFLDLSLSV-SETNVSKRNINESVSKQHSKGASSSKQLRKRE 267
Query: 420 TK 421
K
Sbjct: 268 RK 269
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
Query: 874 SGYSAEKVYQSDSQLVAGNCESEESKVEEINSKI--------------VKVKRDATKRVL 919
S Y++ ++ ++L+ C ++S ++E++S + + +D KR L
Sbjct: 481 SKYTSAELLTGSNRLICDVCTKQKS-LDELDSNLDSKSMDKQTPNNNKPDILQDTIKRDL 539
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY 960
I K PPILTIHLKRF Q +L K ++F +++ P+
Sbjct: 540 IYKPPPILTIHLKRFQQ-VGFQLRKSQKRIHFPIYLDITPF 579
>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
Length = 396
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 117
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 118 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSPES 177
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 178 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 237
Query: 388 TKKAP 392
+ P
Sbjct: 238 KRGYP 242
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 278 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 333
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 334 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 382
Query: 1035 YILFYE 1040
Y+ FYE
Sbjct: 383 YLFFYE 388
>gi|224117792|ref|XP_002317669.1| predicted protein [Populus trichocarpa]
gi|222860734|gb|EEE98281.1| predicted protein [Populus trichocarpa]
Length = 942
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIALKKLFAE 278
+ GL N+GNTCF NS +Q LL QL +YFL N G L +A L
Sbjct: 327 LAGLQNMGNTCFMNSALQCLLHTPQLVEYFLQDYSEEINTQNPLGMHGELALAFGDLL-- 384
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS 338
K + R I PR F G + APQF GY QHDS ELL LLDGL E+L K+
Sbjct: 385 RKLWSSGRTAIAPRVFKGKLALFAPQFSGYNQHDSQELLAFLLDGL-HEDLNRVKQKPYI 443
Query: 339 EGNGIS----------------SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
E S + V VD V GQ ST+ C C S ++PF+ L
Sbjct: 444 EMKDWSGEPDEEVADECWRNHKTRNDSVIVD-VCQGQYKSTLVCPICSKISITFDPFMYL 502
Query: 383 SLPVPT 388
SLP+P+
Sbjct: 503 SLPLPS 508
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R ATK++ + P IL HLKRFS +R +KL+ V+F ++L Y+ D
Sbjct: 804 KEHRQATKKLDLWMLPDILVFHLKRFSY-SRYLKNKLDTFVDFPVHNLDLSKYVKQ--KD 860
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L + H G + GGHY A+ + N+ WY D V V+
Sbjct: 861 GQSYTYELYAISNHYGGLGGGHYTAFAKLIDDNR-----------WYSFDDSRVSPVNEA 909
Query: 1028 EVLRCEAYILFYEKI 1042
++ AY+LFY ++
Sbjct: 910 DIKTSAAYVLFYRRV 924
>gi|195340631|ref|XP_002036916.1| GM12411 [Drosophila sechellia]
gi|194131032|gb|EDW53075.1| GM12411 [Drosophila sechellia]
Length = 1064
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 98/193 (50%), Gaps = 33/193 (17%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-FGPLTIALKKLFAETKPETGLRN 287
VRGL NLGNTCFFN+ ++ + L+ +G LT AL E + G
Sbjct: 299 VRGLTNLGNTCFFNA--------GDIELPMIKGTLSSWGGLTAALANALEELQAGGG--- 347
Query: 288 VINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------------- 334
V PR F +C K PQF G QHD+HELLR LL+ + +E+L +R
Sbjct: 348 VFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKDQDV 407
Query: 335 NSPSEGN----GISSNQGPVFV---DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
NS SE I NQ + + VF G + ST+ C +C + S+ +E FLD+SLPV
Sbjct: 408 NSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPVA 467
Query: 388 TKKA-PSKKTQPA 399
+K P ++ +P+
Sbjct: 468 VEKPQPPQRRKPS 480
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 862 DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLIN 921
++G CSV ++ ++A ++ +++ C+S ++ + K+ V +ATK++L++
Sbjct: 811 EDGECSVQSCLNN-FTAVELMTGQNKV---GCDSCTQRINGSDPKVKSVNTNATKQLLVS 866
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEH 981
P +L +HLKRF R KL V NL P +D Y L GVVEH
Sbjct: 867 SPPAVLILHLKRFQLGPRCIFRKLTRPVK-----NL-PNID---RKQKKLLYALYGVVEH 917
Query: 982 LGTMRGGHYVAYVRGGPK 999
G M GGHY AYV+ PK
Sbjct: 918 SGGMYGGHYTAYVKVRPK 935
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ SD V+EVS + L+ +AY+LFYE+I
Sbjct: 1032 GKWYYVSDSRVQEVSEDTALKAQAYLLFYERI 1063
>gi|76443681|ref|NP_001008861.2| ubiquitin carboxyl-terminal hydrolase 11 [Rattus norvegicus]
gi|60422774|gb|AAH90333.1| Ubiquitin specific peptidase 11 [Rattus norvegicus]
gi|149044387|gb|EDL97708.1| ubiquitin specific protease 11 [Rattus norvegicus]
Length = 921
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 258 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 317
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G I P F + A QF GYQQHDS ELL LLDGL + +K+ N
Sbjct: 318 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCN 377
Query: 342 GI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 378 GAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 436
Query: 387 PT 388
P
Sbjct: 437 PV 438
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P +L IHLKRFS + +R +L L ++FSE + ++P + +
Sbjct: 770 ATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTLVQFPIRDLDFSEFV-IKPKNE---SA 825
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 826 PDLYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 874
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 875 QIESKAAYVLFYQR 888
>gi|354477262|ref|XP_003500841.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Cricetulus griseus]
Length = 1203
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 512 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 571
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 572 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 631
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 632 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 689
Query: 386 VPTKK 390
+P KK
Sbjct: 690 LPMKK 694
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 1035 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 1092
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 1093 GP-CL------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 1134
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 1135 STASEDQIVSKAAYVLFYQR 1154
>gi|164663834|ref|NP_663603.3| ubiquitin carboxyl-terminal hydrolase 11 [Mus musculus]
gi|342187159|sp|Q99K46.4|UBP11_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 11; AltName:
Full=Deubiquitinating enzyme 11; AltName: Full=Ubiquitin
thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|148668416|gb|EDL00740.1| ubiquitin specific peptidase 11, isoform CRA_a [Mus musculus]
Length = 921
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 258 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 317
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G I P F + A QF GYQQHDS ELL LLDGL + +K+ N
Sbjct: 318 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCN 377
Query: 342 GI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 378 GAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 436
Query: 387 PT 388
P
Sbjct: 437 PV 438
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P +L IHLKRFS + +R +L L ++FSE + ++P + +
Sbjct: 770 ATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFV-IKPKNE---SS 825
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 826 PDLYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 874
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 875 QIESKAAYVLFYQR 888
>gi|195392630|ref|XP_002054960.1| GJ19106 [Drosophila virilis]
gi|194149470|gb|EDW65161.1| GJ19106 [Drosophila virilis]
Length = 1175
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 106/229 (46%), Gaps = 60/229 (26%)
Query: 229 VRGLANLGNTCFFNSVMQ------NLLA----MSQLQDYFLNAELTF------------- 265
VRGL NLGNTCFFN+VMQ LLA +++ + F+ TF
Sbjct: 365 VRGLTNLGNTCFFNAVMQCLAQTPFLLAVLKELAEPGEQFVLPGGTFNFKDKGDIELPMI 424
Query: 266 -------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
G LT AL E + G V P F +C+K PQF G QHD+HELLR
Sbjct: 425 KGTLSSWGNLTAALANALEELQSGGG---VFTPSKLFDKLCAKCPQFTGGDQHDAHELLR 481
Query: 319 CLLDGLCSEELAFRKR-------------NSPSE----GNGISSNQGPVFV---DYVFGG 358
LL+ + SE+L +R NS SE I NQ + + VF G
Sbjct: 482 QLLESVRSEDLKRYQRVILQNLGYKDQDINSVSEELRQKCKIYGNQAADRILRPEQVFRG 541
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPV-------PTKKAPSKKTQPAS 400
+ ST+ C +C + S+ +E FLD+SLPV P ++ S + PAS
Sbjct: 542 FLVSTLTCQDCFNVSSRHEYFLDMSLPVAVEKPQPPQRRKTSPENSPAS 590
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
CES ++ + + V +ATK++L++ P +L +HLKRF R KL V++S
Sbjct: 924 CESCTRRINGPDPQAKSVNTNATKQLLVSSPPAVLILHLKRFQLGPRCIFRKLTQQVSYS 983
Query: 953 EIINLRPYMDPGCTDHDNYD-------YRLVGVVEHLGTMRGGHYVAYVRGGPK 999
++++ + + N D Y L GVVEH G + GGHY AYV+ PK
Sbjct: 984 VLLDIAAFCGSKVKNLPNIDRKQKKLLYALYGVVEHSGGLYGGHYTAYVKVRPK 1037
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ SD V+EVS + L+ +AY+LFYE+I
Sbjct: 1143 GKWYYVSDSRVQEVSEKTALKAQAYLLFYERI 1174
>gi|189230348|ref|NP_001121498.1| ubiquitin specific peptidase 15 [Xenopus (Silurana) tropicalis]
gi|183985939|gb|AAI66318.1| LOC100158604 protein [Xenopus (Silurana) tropicalis]
Length = 955
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL PL + + K +AE +
Sbjct: 260 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAELIKQM 319
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 320 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 379
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N I N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 380 ADGRPDKVVAEEAWENHIKRNDS-IIVD-IFHGLFKSTLVCPECSKISVTFDPFCYLTLP 437
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 438 LPMKKERALEVYLVRMDPLAKPMQYKVIVPKIGNI 472
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 29/141 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF--------SEIINLRPY 960
K + ATK++ + PP+L +HLKRFS +R KL+ V+F + +IN P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSTFLIN--PN 840
Query: 961 MDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVY 1020
P C Y L+ V H G M GGHY A+ KNK K WY+ D
Sbjct: 841 AGPCC-------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSS 882
Query: 1021 VREVSLEEVLRCEAYILFYEK 1041
V S E+++ AY+LFY++
Sbjct: 883 VSTASEEQIVSKAAYVLFYQR 903
>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
Length = 383
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 94/182 (51%), Gaps = 21/182 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTFGPLTIALKKLFA---ETKPET 283
GL NLGNTCF NS++Q L L+DY L +L+ A+ + FA + +
Sbjct: 47 GLRNLGNTCFMNSILQCLSNTKDLRDYCLQNSYRRDLSSKKCNTAIMEEFARLLQAIWTS 106
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEGN 341
V++P F I AP+F GY Q D+ E LR LLDGL +E + + R S + +
Sbjct: 107 SANEVVSPSEFKTQIQKYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVTVKPRPSSQDLD 166
Query: 342 GI--SSNQGPVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ S ++ Y+ F GQ+ S++ C ECG+ STV++PF DLSLP+ K
Sbjct: 167 HMPDSEKGKHMWKRYLEREDSRIVELFVGQLKSSLTCTECGYCSTVFDPFWDLSLPIAKK 226
Query: 390 KA 391
A
Sbjct: 227 SA 228
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 66/130 (50%), Gaps = 22/130 (16%)
Query: 915 TKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY---MDPGCTDHDN 970
TK+ I K P IL +HLKRFS+ R R KL+ VNF + ++LR + +P T
Sbjct: 264 TKKFTIQKFPKILVLHLKRFSE-GRIRSGKLSTFVNFPLKDLDLREFSSESNPHAT---- 318
Query: 971 YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
Y L V H GT GGHY AY + P N G WY +D V +S +V
Sbjct: 319 --YNLYAVSNHSGTTMGGHYTAYCK-NPSN----------GEWYTFNDSRVTAMSSNQVR 365
Query: 1031 RCEAYILFYE 1040
+AY+LFYE
Sbjct: 366 SSDAYVLFYE 375
>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
boliviensis boliviensis]
Length = 606
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 201 GSGNVNSEIKSESTVVSGSD-LDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
G G + +S S G D ++ + + GL NLGNTCF NS++Q L +L+DY L
Sbjct: 241 GKGQASGPTRSSS---PGRDSMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCL 297
Query: 260 NAELTFGPLT------IALKKLFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQ 310
L L AL + FA +T + +V++P F I AP+F GY Q
Sbjct: 298 Q-RLYVRDLHHSSNAHTALVEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 356
Query: 311 HDSHELLRCLLDGLCSE--ELAFRKRNSPSEGNGISSNQG--PVFVDYV----------F 356
D+ E LR LLDGL +E +A R +++P + + ++ ++ Y+ F
Sbjct: 357 QDAQEFLRFLLDGLHNEVNRVAPRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLF 416
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
GQ+ S++ C +CG+ STV++PF DLSLP+ + P
Sbjct: 417 VGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYP 452
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 488 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 543
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 591
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 592 AYLLFYE 598
>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
[Cricetulus griseus]
Length = 396
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSNAHTALMEEFAKLIQTIW 117
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R + SP
Sbjct: 118 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKPSPEN 177
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 178 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 237
Query: 388 TKKAP 392
+ P
Sbjct: 238 KRGYP 242
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
+ ++ K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+
Sbjct: 271 RARKRCIKKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TN 328
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
H Y+ L V H GT GGHY AY R V G W+ +D V +S
Sbjct: 329 HAVYN--LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSS 375
Query: 1028 EVLRCEAYILFYE 1040
+V +AY+LFYE
Sbjct: 376 QVRTSDAYLLFYE 388
>gi|392565614|gb|EIW58791.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1313
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----EL-------TFGPLTIALKKLFAET 279
GL N+GNTCF NS +Q L ++L DYFL EL G + A L +
Sbjct: 404 GLGNMGNTCFMNSAIQCLAHNTELVDYFLTGVYQEELNPDNPLGMHGAVAQAFGALMSRI 463
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---- 335
+ PR F + APQF GYQQHDS EL+ LLDGL + K+
Sbjct: 464 WDPESTMSSYTPREFKQTLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEK 523
Query: 336 --------------SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
+ + G V VD +F GQ ST+ C EC S ++PF+
Sbjct: 524 PDWEGGGDKELVELANTSWEGYMKRNDSVVVD-LFQGQYQSTLVCPECSKVSITFDPFMY 582
Query: 382 LSLPVPTKK 390
L+LP+P +K
Sbjct: 583 LTLPLPVQK 591
Score = 53.1 bits (126), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 37/184 (20%)
Query: 883 QSDSQLVAGNCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRFSQ 936
Q + +C E +K E++ + + K + ATKR + K P +L +HLKRFS
Sbjct: 926 QKQKGITLQDCLDEFTKEEKLGADDLWYCPSCKKHQQATKRFDLWKLPDVLVVHLKRFS- 984
Query: 937 DARGRLSKLNGHVNF-------SEIINLRPY--------MDPGCTDHDNYD----YRLVG 977
++R K++ V+F +E++ R D D+ D Y L G
Sbjct: 985 NSRMLRDKIDTFVDFPIEGLDLTEMVGERLVGSRLREQGADVEALGLDDLDEPLQYDLFG 1044
Query: 978 VVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYIL 1037
V EHLG + GGHY AY + G WYH D YV E E + AY+L
Sbjct: 1045 VDEHLGGLGGGHYRAYALN-----------HLTGKWYHFDDSYVTESRPEAAVNGNAYLL 1093
Query: 1038 FYEK 1041
FY +
Sbjct: 1094 FYRR 1097
>gi|13529494|gb|AAH05470.1| Ubiquitin specific peptidase 11 [Mus musculus]
Length = 699
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 36 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 95
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G I P F + A QF GYQQHDS ELL LLDGL + +K+ N
Sbjct: 96 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCN 155
Query: 342 GI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 156 GAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 214
Query: 387 PT 388
P
Sbjct: 215 PV 216
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P +L IHLKRFS + +R +L L ++FSE + ++P + +
Sbjct: 548 ATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFV-IKPKNE---SS 603
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 604 PDLYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYLDDNSVSPVNEN 652
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 653 QIESKAAYVLFYQR 666
>gi|390355680|ref|XP_786312.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Strongylocentrotus purpuratus]
Length = 538
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 130/314 (41%), Gaps = 38/314 (12%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPV 163
++ + CL C + C +G H+ HAR T+H L + + + +C PC +
Sbjct: 53 NQRLHACLTCVFFGCYTMG-------HIQDHARSTKHNLAVDMTHGTV-FCVPCGDYVYD 104
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTV--VSGSDL 221
+ E+ + + + SSV AW +G ++ T VSGS
Sbjct: 105 SEFEQISQEER--------LNCSKFHGSSVQGFSAWEATGYEIELLRRNPTRKKVSGSST 156
Query: 222 DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFGPLTIALKK 274
G +RGL NLGNTCF N ++Q L L+D+FL N L + +
Sbjct: 157 IG-----LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDKHHCENERSRDNCLVCEMTR 211
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
+F E +G+R+V P + + A GY+Q D+HE LD L R
Sbjct: 212 VFQEFY--SGIRSVHIPYRLLHLVWTHARHLAGYEQQDAHEFFIAALDVL------HRHC 263
Query: 335 NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK 394
+ +G + N +D +F G + S V C C ST +PF D+SL + + +
Sbjct: 264 KGHNGASGNNPNHCNCIIDQIFTGGLQSDVTCQACKGISTTVDPFWDISLDLGPSSSSNS 323
Query: 395 KTQPASRAKKTKLP 408
P T LP
Sbjct: 324 APLPVPIIVPTPLP 337
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 902 EINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM 961
+I + + +++TK++ + P + HLKRF +R R K++ ++F +++ PYM
Sbjct: 393 KIKCSVCQNYQESTKQLTMKTLPLVACFHLKRFEHSSRFR-KKISTFISFPHELDMTPYM 451
Query: 962 DP-----GCTDH---------DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKE 1007
G + H DN Y L VV H G++ GHY YVR
Sbjct: 452 STHRRANGLSHHPRSNRTTTSDN-QYSLFAVVNHHGSLEAGHYTCYVRQHQDQ------- 503
Query: 1008 SVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
W+ D + + S+ +VL+ E Y+LFY K
Sbjct: 504 -----WFKCDDALITKASVHDVLQSEGYLLFYHK 532
>gi|42566404|ref|NP_192795.3| ubiquitin carboxyl-terminal hydrolase 10 [Arabidopsis thaliana]
gi|166201359|sp|Q9ZSB5.2|UBP10_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; Short=AtUBP10; AltName:
Full=Ubiquitin thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|332657500|gb|AEE82900.1| ubiquitin carboxyl-terminal hydrolase 10 [Arabidopsis thaliana]
Length = 923
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 90/188 (47%), Gaps = 38/188 (20%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIA----LKKLF 276
GL+NLGNTCF NS +Q L + +YFL N G L IA LKKL+
Sbjct: 305 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 364
Query: 277 AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS 336
+ RN + PR+F + APQF GY QHDS ELL LLDGL E+L KR
Sbjct: 365 SSG------RNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNKVKRKP 417
Query: 337 PSE----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
E N + V VD V GQ ST+ C CG S ++PF+
Sbjct: 418 YIELKDSDSRPDDEVAEELWNYHKARNDSVIVD-VCQGQYKSTLVCPVCGKISITFDPFM 476
Query: 381 DLSLPVPT 388
LS+P+P+
Sbjct: 477 YLSVPLPS 484
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ +
Sbjct: 775 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYLKNKIDTFVNFPVHDLDLSKYVKN--KN 831
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L V H G + GGHY AY + NK WYH D +V V+
Sbjct: 832 GQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNK-----------WYHFDDSHVSSVNES 880
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY ++
Sbjct: 881 EIRNSAAYVLFYRRV 895
>gi|114205510|gb|AAI05614.1| Usp11 protein [Rattus norvegicus]
Length = 728
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 65 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 124
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G I P F + A QF GYQQHDS ELL LLDGL + +K+ N
Sbjct: 125 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCN 184
Query: 342 GI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 185 GAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 243
Query: 387 PT 388
P
Sbjct: 244 PV 245
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P +L IHLKRFS + +R +L L ++FSE + ++P +
Sbjct: 577 ATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTLVQFPIRDLDFSEFV-IKPKNESA--- 632
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 633 PDLYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 681
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 682 QIESKAAYVLFYQR 695
>gi|19114020|ref|NP_593108.1| ubiquitin C-terminal hydrolase Ubp7 [Schizosaccharomyces pombe 972h-]
gi|24638332|sp|Q9P7S5.1|UBP7_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 7;
AltName: Full=Deubiquitinating enzyme 7; AltName:
Full=Ubiquitin thioesterase 7; AltName:
Full=Ubiquitin-specific-processing protease 7
gi|6912025|emb|CAB72233.1| ubiquitin C-terminal hydrolase Ubp7 [Schizosaccharomyces pombe]
Length = 875
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 910 VKRDATKRVLINK-APPILTIHLKRF----SQDARGRLSKLNGHVNFSEIINLRPYMDPG 964
V R+A KR+L++ PP+ IHLKRF S D K++ + F + ++L ++ P
Sbjct: 728 VYRNAYKRMLLDDPLPPVFIIHLKRFFQEISHDGYANPKKISDFIEFEQELDLNEFVMPH 787
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYV-------RGGPKNKVKAKKESVG---GVWY 1014
++ YRL GV+ H GT+ GHYVAYV P K + G W
Sbjct: 788 LRASSSFRYRLFGVIVHSGTLNYGHYVAYVLSHKFLDLSAPSTNSKDFRSEAGIPERRWL 847
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
+ SD VRE S +EV + EAY+LFYE++
Sbjct: 848 YISDNIVRESSWDEVSKVEAYMLFYERV 875
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----------LNAELTFGP---LTIALKKLFA 277
GL NLG TCFFNS +Q L A L D + +LT P L A K
Sbjct: 209 GLKNLGATCFFNSTLQVLCACEALHDVISPFQYSHSSVIVRKLTKSPESSLLSAFIKFLE 268
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN 335
G +V P +FFG PQF Q D+HELLR LLD L SEE + N
Sbjct: 269 TFYKSDGTISVYRPTTFFGEFRRLHPQFSESVQQDAHELLRLLLDDLISEEFRVLRFN 326
>gi|449279659|gb|EMC87193.1| Ubiquitin carboxyl-terminal hydrolase 15 [Columba livia]
Length = 982
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFL EL F PL + + K +AE +
Sbjct: 289 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLTDKYQEELNFDNPLGMRGEIAKSYAELIKQM 348
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 349 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 408
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 409 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 466
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 467 LPMKKERTLEVYLVRMDPLAKPMQYKVVVPKIGNI 501
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 26/140 (18%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRF--SQDARGRLSKLNGH----VNFSEIINLRPYMD 962
K + ATK++ + PP+L +HLKRF S+ R +L L G ++ SE + + P
Sbjct: 812 KEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSEFL-INPNAG 870
Query: 963 PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR 1022
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 P-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSVS 912
Query: 1023 EVSLEEVLRCE-AYILFYEK 1041
++++ +Y+LFY++
Sbjct: 913 TACEDQIVASTFSYVLFYQR 932
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 75/337 (22%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPL---------------VIQWEN 148
+K+ WVCL C CG H +H + PL V +
Sbjct: 35 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQIPLTNHKKSEKQDKVQHTVCMDCS 89
Query: 149 PHLRWCFPCNTLIP-------VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFG 201
+ +C+ C+ + V+K E+ +N E I R + V+
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNL----ENSAFIADRHRKRKLVE------- 138
Query: 202 SGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--- 258
NS + S+ V+GS A GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 ----NSSLNSKLLKVNGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKEL 190
Query: 259 ----LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKA 302
L T G T ++L + F +T G + +P S F +
Sbjct: 191 PAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 250
Query: 303 PQFKGYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFV 352
P F+GYQQ D+HE +R LLD L S ++ ++ S N N V
Sbjct: 251 PNFRGYQQQDAHEFMRYLLDHLHLELQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVV 310
Query: 353 DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + +N Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|348678876|gb|EGZ18693.1| hypothetical protein PHYSODRAFT_503684 [Phytophthora sojae]
Length = 1124
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 98/201 (48%), Gaps = 32/201 (15%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFG------------PL----TIAL 272
V GL NLGNTCF NS++Q L+ + L+DYFL + G PL +A+
Sbjct: 487 VVGLRNLGNTCFMNSMLQCLINTAPLRDYFLEKDPETGSPFFTKEINRHNPLGMKGIMAV 546
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELA 330
+ K +G + P S I APQF GYQQ DS EL+ LLDGL + +
Sbjct: 547 EFASLLRKIWSGEFTAVAPTSLKSVIGQYAPQFAGYQQQDSQELMNFLLDGLHEDLNRVK 606
Query: 331 FRKRNSPSEGNG-----ISSNQGPVFVDY-------VFGGQIASTVRCV--ECGHSSTVY 376
+ P E NG ++ + FV F GQ+ S V C +CG+ S +
Sbjct: 607 TKPYTKPVERNGREDPEVAQEEWQQFVRRNNSIIVDNFMGQLRSHVTCSNPDCGNESITF 666
Query: 377 EPFLDLSLPVPTKKAPSKKTQ 397
+P+++LS+P+P K+ + + Q
Sbjct: 667 DPYMNLSVPIPNKETVTVQVQ 687
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
Query: 914 ATKRVLINKAPPILTIHLKRF--SQDA----RGRLSKLNGHVNFS-EIINLRPYMDPGCT 966
A K+ + P +L HLKRF +Q++ R ++S L V F E ++L ++ G
Sbjct: 1001 AFKKFDLFSLPKVLIFHLKRFRYAQNSFYMHRDKISTL---VEFPIEGLDLSEFV-IGPQ 1056
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y L V EH+G + GGHY A K V W++ +D + E S
Sbjct: 1057 NGSEPIYDLFAVSEHMGGLGGGHYTA-----------VAKNPVNECWFNFNDSHTSEASA 1105
Query: 1027 EEVLRCEAYILFY 1039
E+ + AY+LFY
Sbjct: 1106 EDAVSSRAYVLFY 1118
>gi|195132697|ref|XP_002010779.1| GI21725 [Drosophila mojavensis]
gi|193907567|gb|EDW06434.1| GI21725 [Drosophila mojavensis]
Length = 1124
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 97/212 (45%), Gaps = 53/212 (25%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----------------------NAEL--- 263
VRGL NLGNTCFFN+VMQ L L D + EL
Sbjct: 325 VRGLTNLGNTCFFNAVMQCLAQTPFLLDVLKELAEPGEQFVLPGGTFNFKDKGDVELPMI 384
Query: 264 -----TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
++G LT AL E + G V P F +C+K PQF G QHD+HELLR
Sbjct: 385 RGTLCSWGNLTSALANALEELQSGGG---VFTPSKLFDKLCAKCPQFTGGDQHDAHELLR 441
Query: 319 CLLDGLCSEELAFRKR----NSPSEGNGISS-------------NQGPVFV---DYVFGG 358
LL+ + SE+L +R N + ISS NQ + D VF G
Sbjct: 442 QLLESVRSEDLKRYQRVILQNLGYKDQDISSVSEELRQKCKIYGNQAADRILRPDQVFRG 501
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
+ ST+ C +C + S+ +E FLD+SLPV +K
Sbjct: 502 FLVSTLTCQDCFNISSRHEYFLDISLPVAVEK 533
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 864 GSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKA 923
G CSV + + ++A ++ +++ CES ++ + + V +ATK++L++
Sbjct: 858 GECSV-ASCLNNFTAVELMTGQNKV---GCESCTRRINGSDPQAKTVNTNATKQLLVSSP 913
Query: 924 PPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YRLV 976
P +L +HLKRF R KL V+++ ++++ + + N D Y L
Sbjct: 914 PAVLILHLKRFQLGPRCIFRKLTRPVSYTVLLDIAAFCGSKVKNLPNIDRKQKKLLYALY 973
Query: 977 GVVEHLGTMRGGHYVAYVRGGPK 999
GVVEH G + GGHY AYV+ PK
Sbjct: 974 GVVEHSGGLYGGHYTAYVKVRPK 996
Score = 44.3 bits (103), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ SD V+EVS + L+ +AY+LFYE+I
Sbjct: 1092 GKWYYVSDSRVQEVSEDAALKAQAYLLFYERI 1123
>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
familiaris]
Length = 395
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +T
Sbjct: 58 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLSHSSNVHTALMEEFAKLIQTIW 116
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 117 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNPEN 176
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 177 LDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 236
Query: 388 TKKAP 392
+ P
Sbjct: 237 KRGYP 241
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 277 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 332
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 333 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 381
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 382 YLLFYE 387
>gi|426023756|sp|F6Z5C0.2|UBP15_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
Length = 982
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL PL + + K +AE +
Sbjct: 289 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAELIKQM 348
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 349 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 408
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N I N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 409 ADGRPDKVVAEEAWENHIKRNDS-IIVD-IFHGLFKSTLVCPECSKISVTFDPFCYLTLP 466
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 467 LPMKKERALEVYLVRMDPLAKPMQYKVIVPKIGNI 501
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 29/141 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF--------SEIINLRPY 960
K + ATK++ + PP+L +HLKRFS +R KL+ V+F + +IN P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSTFLIN--PN 869
Query: 961 MDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVY 1020
P C Y L+ V H G M GGHY A+ KNK K WY+ D
Sbjct: 870 AGPCC-------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSS 911
Query: 1021 VREVSLEEVLRCEAYILFYEK 1041
V S E+++ AY+LFY++
Sbjct: 912 VSTASEEQIVSKAAYVLFYQR 932
>gi|18413358|ref|NP_567363.1| ubiquitin carboxyl-terminal hydrolase 9 [Arabidopsis thaliana]
gi|30681496|ref|NP_849356.1| ubiquitin carboxyl-terminal hydrolase 9 [Arabidopsis thaliana]
gi|75249397|sp|Q93Y01.1|UBP9_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 9; AltName:
Full=Deubiquitinating enzyme 9; Short=AtUBP9; AltName:
Full=Ubiquitin thioesterase 9; AltName:
Full=Ubiquitin-specific-processing protease 9
gi|15450767|gb|AAK96655.1| putative protein [Arabidopsis thaliana]
gi|34098847|gb|AAQ56806.1| At4g10590 [Arabidopsis thaliana]
gi|222423042|dbj|BAH19503.1| AT4G10590 [Arabidopsis thaliana]
gi|332657501|gb|AEE82901.1| ubiquitin carboxyl-terminal hydrolase 9 [Arabidopsis thaliana]
gi|332657502|gb|AEE82902.1| ubiquitin carboxyl-terminal hydrolase 9 [Arabidopsis thaliana]
Length = 910
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 91/190 (47%), Gaps = 38/190 (20%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIA----LKK 274
+ GL+NLGNTCF NS +Q L + +YFL N G L IA LKK
Sbjct: 302 LAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKK 361
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
L++ RN + PR+F + APQF GY QHDS ELL LLDGL E+L KR
Sbjct: 362 LWSSG------RNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNKVKR 414
Query: 335 NSPSE----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEP 378
E N + V VD V GQ ST+ C CG S ++P
Sbjct: 415 KPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVD-VCQGQYKSTLVCPACGKISITFDP 473
Query: 379 FLDLSLPVPT 388
F+ LS+P+P+
Sbjct: 474 FMYLSVPLPS 483
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ +
Sbjct: 774 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYLKNKIDTFVNFPVHDLDLSKYVK--NKN 830
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L V H G + GGHY AY + N+ WYH D +V V+
Sbjct: 831 DQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNE-----------WYHFDDSHVSSVNES 879
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY ++
Sbjct: 880 EIKNSAAYVLFYRRV 894
>gi|47229603|emb|CAG06799.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1107
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 107/214 (50%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPET 283
GL+NLGNTCF NS +Q L S L +YFLN AE+ PL + + + +A+ +
Sbjct: 322 GLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINRENPLGMRGEIAEAYADLVKQM 381
Query: 284 GL--RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------RN 335
L + + PR+F + APQF GYQQ DS ELL LLDGL + +K R+
Sbjct: 382 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRD 441
Query: 336 SPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ + I + + + VD +F G ST+ C EC S ++PF L+LP+
Sbjct: 442 AEGRPDEIVAKEAWTNHRLRNDSIIVD-IFHGLFKSTLVCPECSKVSVTFDPFCYLTLPL 500
Query: 387 PTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
P KK + ++ P SR + ++ K G +
Sbjct: 501 PMKKDRTMEVFLVRSDPQSRPTQYRVVVPKLGAV 534
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 17/124 (13%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V+F +N+ ++ +P +
Sbjct: 887 KKHQQATKKFDLWSLPRILVVHLKRFSYNRCWR-DKLDTVVDFPIRDLNMSEFVCNPKAS 945
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GGHY AY KNK G W++ D V S
Sbjct: 946 P---YIYDLIAVSNHYGGMGGGHYTAYC----KNKAD-------GRWHYFDDSSVSSASE 991
Query: 1027 EEVL 1030
++++
Sbjct: 992 DQIV 995
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 132/304 (43%), Gaps = 45/304 (14%)
Query: 108 WVCLGCGHYACGGVGLPTTPQSHV-VRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
W+C+ CG CG H + H T H + + +N + +C+ C+ + +
Sbjct: 12 WICVKCGRIHCG-----RYVNGHAKLHHEEATNHAVCMDCDNLAV-FCYKCDEFVINDTA 65
Query: 167 ----EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLD 222
E+ + ++S ++ +S S D ++ + +IK + +
Sbjct: 66 PGHLEKLRQQLKSISSAQARMRQKSRRRCSTDSQE----NEKATKKIKKDDRLSKPRS-- 119
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-----LNAELTFGPLTIALKK--- 274
GL NLGNTCF N+V+Q+L + Q Y L ++T I +K
Sbjct: 120 -------SGLRNLGNTCFMNAVLQSLSNIQQFCGYIKQLPSLEEKVT-KVKKIQTRKSKT 171
Query: 275 -----LFAETKPET------GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
L E +T G + I+P S F I P+F+GYQQ D+HE +R LLD
Sbjct: 172 PEEDVLLVEELRKTLCALWQGSKGAISPESLFAVIWKVVPRFRGYQQQDAHEFMRYLLDR 231
Query: 324 LCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
L +E L + S+ I V +FGG + + V C+ CG S ++PFLDLS
Sbjct: 232 LHTELLTLLPYPN-SDSPFIGPKGKSTIVTAIFGGLLQNEVTCLVCGVESKKHDPFLDLS 290
Query: 384 LPVP 387
L +P
Sbjct: 291 LDIP 294
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 21/138 (15%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-----D 962
K K+ +TK+ I + P +L +H+KRF + R+ KL V F E +N+ Y+ +
Sbjct: 339 KKKQRSTKKFWIRRLPNVLCLHIKRFRWQSFFRV-KLETFVEFPLEGLNMHKYILDNLHE 397
Query: 963 PGCTDHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
+ + +Y L VV H G+ G GHY +Y R G W+H +D V
Sbjct: 398 TRGSGSGSNEYDLAAVVVHHGSGAGSGHYTSYARHE-------------GQWFHFNDSTV 444
Query: 1022 REVSLEEVLRCEAYILFY 1039
E V +C+AYILFY
Sbjct: 445 TPCEPETVAKCKAYILFY 462
>gi|326529625|dbj|BAK04759.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 884
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 91/192 (47%), Gaps = 46/192 (23%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAEL--TFGPLTIALK 273
GL NLGNTCF NS +Q L ++L DYFL N EL TFG L L+
Sbjct: 249 GLENLGNTCFMNSSIQCLAHTTKLVDYFLGDYDSDINQTNPLGLNGELALTFGEL---LR 305
Query: 274 KLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK 333
L+ T RN + P +F I APQF G+ QHDS ELL LLDGL E+L K
Sbjct: 306 SLW------TNDRNTVAPHNFKAKIACFAPQFSGFNQHDSQELLAFLLDGL-HEDLNQVK 358
Query: 334 RNSPSEG-----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVY 376
E N ++ N V VD GQ ST+ C C +S +
Sbjct: 359 YKPYEEAKDASGRPDEEVADEYWRNHLARNDS-VIVD-TCHGQYKSTLTCPTCSKTSVTF 416
Query: 377 EPFLDLSLPVPT 388
+PF+ LSLPVP+
Sbjct: 417 DPFMYLSLPVPS 428
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + A K++ + + P +L IHLKRFS R +KL V+F ++L Y+ +
Sbjct: 764 KKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTR-NKLETFVDFPISDLDLSSYIATE-NE 821
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
N YRL + H G M GGHY A + +E G W+ D V +S +
Sbjct: 822 QPNKHYRLYAISNHYGNMGGGHYTASI----------CQEGKG--WHKFDDECVTPISED 869
Query: 1028 EVLRCEAYILFYEK 1041
+ AY+LFY +
Sbjct: 870 NIKTAAAYVLFYRR 883
>gi|260836461|ref|XP_002613224.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
gi|229298609|gb|EEN69233.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
Length = 346
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 89/184 (48%), Gaps = 25/184 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------GPLTIALKKLFAETKPET- 283
GL NLGNTCF NS++Q L QL DY +N F + AL K FA +
Sbjct: 7 GLRNLGNTCFMNSILQCLSHTKQLADYCMNENYIFDLKDSNSSMKGALMKAFANLIRQMW 66
Query: 284 -GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS---- 338
G + ++P +F I AP+F GY Q DS E LR LL+GL + + + PS
Sbjct: 67 RGSSDAVSPSAFKAQIQKFAPRFVGYNQQDSQEFLRFLLEGLHDDINKVQVKPKPSYSDD 126
Query: 339 -EGNGISSNQGP--VFVDY----------VFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
E +S + + Y +F GQ+ S ++C C H S ++PF DLSLP
Sbjct: 127 EEIEKLSDERKARHAWNKYLLRDNSQITDLFVGQLKSVLQCTHCQHCSVTFDPFWDLSLP 186
Query: 386 VPTK 389
+P K
Sbjct: 187 IPKK 190
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTD 967
K +R TKR + + P IL +HLKRFS R R KL+ VNF +NL+ + P
Sbjct: 220 KARRKCTKRFFLQRLPKILVLHLKRFS-GMRYR-QKLSTTVNFPLAKLNLQEFTCPESRG 277
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V H GT GGHY AY K G W+ +D V +S
Sbjct: 278 SAPATYDLYAVSNHSGTTFGGHYTAYC-----------KYPTTGDWHCFNDSRVSSISAS 326
Query: 1028 EVLRCEAYILFYE 1040
V+ EAY+LFYE
Sbjct: 327 SVISSEAYVLFYE 339
>gi|353232906|emb|CCD80261.1| ubiquitin-specific peptidase 16 (C19 family) [Schistosoma mansoni]
Length = 622
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 94/207 (45%), Gaps = 54/207 (26%)
Query: 229 VRGLANLGNTCFFNSVMQ---------NLLAMSQLQDYFL-------------NAELTFG 266
V+GL NLGNTC+ N+ +Q NLL + + ++ L + L
Sbjct: 34 VKGLHNLGNTCYLNAALQCLAKSPWLLNLLVVDESRESALTKPNGDSLCTLCVSLPLMKC 93
Query: 267 PLTIALKKLFAETKP------ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
PLT K+L + KP + N I+P F + P+F G++QHDSHEL+R L
Sbjct: 94 PLTTQFKELISVLKPGELSNTKMSSSNTISPGMFRNVFIERCPRFSGFRQHDSHELIRAL 153
Query: 321 LDGLCSEELAFRKRNSPSEGNGISSNQGP---------------------VFVDYVFGGQ 359
LD L EEL+ K+ G + N P VD +FGG
Sbjct: 154 LDCLKQEELSRWKK-----GILLKLNVNPKDVRDDEKESIRSWGKAASIATIVDRLFGGI 208
Query: 360 IASTVRCVECGHSSTVYEPFLDLSLPV 386
+ ST++C CG +EPFLDLSL V
Sbjct: 209 LVSTIQCCCCGTVRPKFEPFLDLSLSV 235
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
Query: 874 SGYSAEKVYQSDSQLVAGNCESEESKVEEINSKI--------------VKVKRDATKRVL 919
S Y++ ++ ++L+ C ++S ++E++S + + +D KR L
Sbjct: 481 SKYTSAELLTGSNRLICDVCTKQKS-LDELDSNLDSKSMDKQTPNNNKPDILQDTIKRDL 539
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY 960
I K PPILTIHLKRF Q +L K ++F +++ P+
Sbjct: 540 IYKPPPILTIHLKRFQQ-VGFQLRKSQKRIHFPIYLDITPF 579
>gi|449531424|ref|XP_004172686.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like, partial [Cucumis sativus]
Length = 588
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 123/255 (48%), Gaps = 53/255 (20%)
Query: 175 ALSEVVKLIKGRSTEISSVDVEDAWFGSGNVN--------SEIKSESTVVSGSDLDGNAC 226
LS+ +K +G+ E+++ + ++ S +N S + S+V SGS + +
Sbjct: 55 GLSDFIKCKEGKKDELANSILGNSSATSLMMNGASGTGSASCFRVNSSVFSGSSREAGSL 114
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAE--LTFGPLT 269
+ GL NLGNTCF NS +Q L+ +L DYFL N E L FG +
Sbjct: 115 GLT-GLQNLGNTCFMNSALQCLVHTPKLVDYFLGDYGREINHDNPLGMNGEIALAFGDM- 172
Query: 270 IALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEEL 329
L+KL+A + + PR+F + APQF G QHDS ELL LLDGL E+L
Sbjct: 173 --LRKLWAPGA------SPVAPRTFKSKLARFAPQFSGCNQHDSQELLAFLLDGL-HEDL 223
Query: 330 AFRKRNSPSE---GNGISSNQ-------------GPVFVDYVFGGQIASTVRCVECGHSS 373
K+ E G+G S N+ + VD V GQ ST+ C C S
Sbjct: 224 NRVKKKPYVEAKDGDGRSDNEVADEYWQNHLARNDSIIVD-VCQGQYKSTLVCPICKKVS 282
Query: 374 TVYEPFLDLSLPVPT 388
T ++PF+ LSLP+P+
Sbjct: 283 TTFDPFMYLSLPLPS 297
>gi|343960669|dbj|BAK61924.1| ubiquitin carboxyl-terminal hydrolase 16 [Pan troglodytes]
Length = 457
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 18/137 (13%)
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR LLDG+
Sbjct: 27 GPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGMR 84
Query: 326 SEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVEC 369
+EE + NS + + N+ P FVD +FGG++ S + C +C
Sbjct: 85 AEEHQRVSKGILKAFGNSTEKLDDELKNKVKDYEKKKSIPSFVDRIFGGELTSMIMCDQC 144
Query: 370 GHSSTVYEPFLDLSLPV 386
S V+E FLDLSLPV
Sbjct: 145 RTVSLVHESFLDLSLPV 161
>gi|332018399|gb|EGI58993.1| Ubiquitin carboxyl-terminal hydrolase 2 [Acromyrmex echinatior]
Length = 749
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 92/194 (47%), Gaps = 26/194 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y LN + T + AL K F++ E
Sbjct: 409 LNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLTDINTTTSSMKGALIKAFSQVTHE 468
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G +V+N + I AP+F GY Q D+ E LR LL+GL + + P
Sbjct: 469 LWEVGGDHVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIH 528
Query: 340 GNGISS----------------NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
G+ S ++ VD VF GQ+ S++RC C H S +PF DLS
Sbjct: 529 GDIPDSYTDMQKAVESWKRYLRSEDSTIVD-VFVGQLRSSLRCTSCDHVSVTLDPFWDLS 587
Query: 384 LPVPTKKAPSKKTQ 397
LP+P + K +Q
Sbjct: 588 LPIPARSGTVKLSQ 601
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMD---PG 964
+++R TK I K P IL IHLKRFS R R KLN V+F ++L + PG
Sbjct: 624 QMRRKCTKSFSIQKFPKILVIHLKRFSPMERFR-GKLNVMVDFPLTGLDLSAFAAPRVPG 682
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
CT Y L GV H GT GHY AY K G W+ +D V V
Sbjct: 683 CT------YNLYGVANHSGTTYSGHYTAYC-----------KHPYSGEWHEYNDSRVSVV 725
Query: 1025 SLEEVLRCEAYILFYEK 1041
S V+ EAY+LFYE+
Sbjct: 726 SSRSVVSSEAYVLFYEQ 742
>gi|115481222|ref|NP_001064204.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|78707833|gb|ABB46808.1| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
gi|113638813|dbj|BAF26118.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|215767234|dbj|BAG99462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612471|gb|EEE50603.1| hypothetical protein OsJ_30790 [Oryza sativa Japonica Group]
Length = 931
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 88/184 (47%), Gaps = 26/184 (14%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFGPLTIALKKLFAET-- 279
+ GL NLGNTCF NS +Q+L+ L +YFL N E G L L F E
Sbjct: 310 LSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLG-LQGELATAFGELLR 368
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR----- 334
K + R I PR F + APQF GY QHDS ELL LLDGL + +K+
Sbjct: 369 KLWSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKKPYIEA 428
Query: 335 ----NSPSE------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
P E N + + VD F GQ ST+ C +C S ++PF+ LSL
Sbjct: 429 KDADGRPDEELAEECWNYHKARNDSIIVD-KFQGQYKSTLVCPDCKKISVTFDPFMYLSL 487
Query: 385 PVPT 388
P+P+
Sbjct: 488 PLPS 491
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 26/138 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNY 971
+ A+K++ + + P IL +HLKRFS +R +KL+ VNF P D + + N+
Sbjct: 790 KQASKKLDLWRLPEILVVHLKRFSY-SRFMKNKLDTFVNF-------PIHDLDMSRYANH 841
Query: 972 D-------YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
Y L V+ H G M GGHY AY + ++ WYH D +V V
Sbjct: 842 SRGDQPPIYELYAVINHYGGMGGGHYSAYAKLVEEDS-----------WYHFDDSHVSSV 890
Query: 1025 SLEEVLRCEAYILFYEKI 1042
E++ AY+LFY ++
Sbjct: 891 GEEDIRTSSAYLLFYRRV 908
>gi|260822380|ref|XP_002606580.1| hypothetical protein BRAFLDRAFT_131969 [Branchiostoma floridae]
gi|229291923|gb|EEN62590.1| hypothetical protein BRAFLDRAFT_131969 [Branchiostoma floridae]
Length = 911
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 87/184 (47%), Gaps = 25/184 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTIA--LKKLFAETKPE- 282
GL+NLGNTCF NS +Q L + L YFL + PL + + K +AE +
Sbjct: 275 GLSNLGNTCFMNSALQCLSNVPVLTRYFLENHYQEELNSDNPLGMKGEIAKTYAELIKQI 334
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + PR+F + APQF GYQQ DSHELL LLDGL + RK+
Sbjct: 335 WSGKYSYTIPRNFKTAVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYVELRD 394
Query: 335 --NSPSE------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P E + VD F G ST+ C EC S ++PF LSLP+
Sbjct: 395 ADGRPDEEVADEAWKNHRLRNDSIIVD-TFHGLFKSTLVCPECSKISITFDPFCYLSLPL 453
Query: 387 PTKK 390
P KK
Sbjct: 454 PIKK 457
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-SEIINLRPYMDPGCTD 967
K + ATK+ + P IL IHLKRFS + R KL+ V F + +++ ++
Sbjct: 745 KKHQQATKKFDLWSLPKILVIHLKRFSYNRYWR-DKLDTMVEFPTRDLDMSEFIINDGHG 803
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ YD L+GV H G M GGHY AY + + WY+ D V S +
Sbjct: 804 YATYD--LIGVSNHYGGMGGGHYTAYGKSREDTQ-----------WYYFDDSSVSPASED 850
Query: 1028 EVLRCEAYILFYE 1040
+ + AY+LFYE
Sbjct: 851 QCVSKAAYVLFYE 863
>gi|16552833|dbj|BAB71388.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 98/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 327
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 387
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ ++ C +CG+ STV++PF DLSLP+
Sbjct: 388 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKGSLTCTDCGYCSTVFDPFWDLSLPIAK 447
Query: 389 KKAP 392
+ P
Sbjct: 448 RGYP 451
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL + LKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLRLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 590
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 591 AYLLFYE 597
>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cavia porcellus]
Length = 611
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 38/192 (19%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGL----- 285
GL NLGNTCF NS++Q L +L+DY L + ++ L + TGL
Sbjct: 274 GLRNLGNTCFMNSILQCLSNTRELRDYCLQR--------LYMRDLSHTSSVHTGLMEEFA 325
Query: 286 -----------RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFR 332
+V++P F I AP+F GY Q D+ E LR LLDGL +E +A R
Sbjct: 326 KLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAVR 385
Query: 333 KRNSPSEGNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFL 380
++S + + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF
Sbjct: 386 PKSSHENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 445
Query: 381 DLSLPVPTKKAP 392
DLSLP+ + P
Sbjct: 446 DLSLPIAKRGYP 457
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL+ VNF ++LR + T+H Y+
Sbjct: 493 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLSTFVNFPLRDLDLREFASEN-TNHAVYN-- 548
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 549 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 597
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 598 YLLFYE 603
>gi|218184165|gb|EEC66592.1| hypothetical protein OsI_32808 [Oryza sativa Indica Group]
Length = 788
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 88/184 (47%), Gaps = 26/184 (14%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFGPLTIALKKLFAET-- 279
+ GL NLGNTCF NS +Q+L+ L +YFL N E G L L F E
Sbjct: 310 LSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLG-LQGELATAFGELLR 368
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR----- 334
K + R I PR F + APQF GY QHDS ELL LLDGL + +K+
Sbjct: 369 KLWSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKKPYIEA 428
Query: 335 ----NSPSE------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
P E N + + VD F GQ ST+ C +C S ++PF+ LSL
Sbjct: 429 KDADGRPDEELAEECWNYHKARNDSIIVDK-FQGQYKSTLVCPDCKKISVTFDPFMYLSL 487
Query: 385 PVPT 388
P+P+
Sbjct: 488 PLPS 491
>gi|393240437|gb|EJD47963.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 1229
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 86/189 (45%), Gaps = 32/189 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----EL-------TFGPLTIALKKLFAET 279
GL NLGNTCF NS +Q + ++ +YFL EL G + A L
Sbjct: 364 GLVNLGNTCFMNSALQCMAHTQEVTEYFLTGVYRDELNPSNPLGMGGAIAEAFGSLLQRL 423
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR----N 335
TG + I PR F + APQF GYQQHD+ ELL LLDGL + K+ N
Sbjct: 424 WETTG--SSIAPRDFKSALQRFAPQFIGYQQHDTQELLAFLLDGLHEDLNRVLKKPYVEN 481
Query: 336 SPSEG--------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
EG G + VD +F GQ ST+ C EC S ++PF+
Sbjct: 482 PDWEGGGEQELIQLARTTWEGYMKRNDSIIVD-LFQGQYKSTLVCPECSKVSITFDPFMY 540
Query: 382 LSLPVPTKK 390
L+LP+P +
Sbjct: 541 LTLPLPVDR 549
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 29/150 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMD----- 962
K + ATK+ + K P IL +HLKRFS ++R K++ V+F E ++L +
Sbjct: 911 KKHQQATKKFELWKMPDILVVHLKRFS-NSRMLRDKIDTFVDFPIEGLDLEARVGERTAL 969
Query: 963 ----------PGCTDHDN-YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGG 1011
PG D D Y L V EH+G + GGHY AY + P++ +
Sbjct: 970 KSLATQGVEVPGDVDLDEPLVYDLYAVDEHMGGLGGGHYRAYAKN-PEDDL--------- 1019
Query: 1012 VWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
WYH D +V +E + AY+LFY +
Sbjct: 1020 -WYHFDDSHVSRCEAKESVNSNAYLLFYRR 1048
>gi|328724652|ref|XP_003248212.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like isoform 1
[Acyrthosiphon pisum]
Length = 1554
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 116/253 (45%), Gaps = 37/253 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTI--ALKKLFAETKPET 283
GL NLGNTCF N+ +Q + L YF+N + PL + + K + + E
Sbjct: 750 GLNNLGNTCFMNAALQCVSNTRLLTQYFINDMHLYELNRSNPLGMKGCIAKRYGDLIHEI 809
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
G I P I AP+F G+QQHDS ELL LLDGL E+L R P
Sbjct: 810 WRGTAKTIAPLKLRWTIGKYAPRFNGFQQHDSQELLAFLLDGL-HEDLN-RVHGKPYSEL 867
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
SEG N I N+ + VD +F GQ+ S V C +CGH S ++PF LS
Sbjct: 868 TDSEGRPDVTVAEEAWENHIVRNKS-IVVD-LFHGQLKSKVTCKKCGHESVRFDPFNYLS 925
Query: 384 LPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLS-ISSKSQS 442
LP+P + Q +P K R+ A D H+V +S+LS IS+ +
Sbjct: 926 LPLPMESYVC--LQVIVIKLDGTVPVKYGLRMNA---DDKHSVVKSKLSSLSGISANNLK 980
Query: 443 LTESTAPLSENVV 455
L E +N++
Sbjct: 981 LAEIIGAQIKNII 993
>gi|328724654|ref|XP_003248213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like isoform 2
[Acyrthosiphon pisum]
Length = 1445
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 116/253 (45%), Gaps = 37/253 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTI--ALKKLFAETKPET 283
GL NLGNTCF N+ +Q + L YF+N + PL + + K + + E
Sbjct: 750 GLNNLGNTCFMNAALQCVSNTRLLTQYFINDMHLYELNRSNPLGMKGCIAKRYGDLIHEI 809
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
G I P I AP+F G+QQHDS ELL LLDGL E+L R P
Sbjct: 810 WRGTAKTIAPLKLRWTIGKYAPRFNGFQQHDSQELLAFLLDGL-HEDLN-RVHGKPYSEL 867
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
SEG N I N+ + VD +F GQ+ S V C +CGH S ++PF LS
Sbjct: 868 TDSEGRPDVTVAEEAWENHIVRNKS-IVVD-LFHGQLKSKVTCKKCGHESVRFDPFNYLS 925
Query: 384 LPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLS-ISSKSQS 442
LP+P + Q +P K R+ A D H+V +S+LS IS+ +
Sbjct: 926 LPLPMESYVC--LQVIVIKLDGTVPVKYGLRMNA---DDKHSVVKSKLSSLSGISANNLK 980
Query: 443 LTESTAPLSENVV 455
L E +N++
Sbjct: 981 LAEIIGAQIKNII 993
>gi|336388948|gb|EGO30092.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Serpula
lacrymans var. lacrymans S7.9]
Length = 1065
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 47/175 (26%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDAR-------GRLSKLNGHVNFSEIINLRPYMD 962
+ R A KR LI+ PP+L +HLKRF Q ++ KL+ +V+F E ++L PY+
Sbjct: 896 IMRPAFKRYLISTPPPVLVVHLKRFQQTSKTPVISFSNGFKKLDDYVSFPEFLDLAPYLA 955
Query: 963 PGCTDH--------------DNYDYRLVGVVEHLGTMRGGHYVAYV-------------- 994
P + + YRL VV H+G M GGHY+AY
Sbjct: 956 PKKDEFFKSRATGRSRGKRPERCMYRLYAVVVHIGNMLGGHYIAYTALPSSTSSDTARSS 1015
Query: 995 -------RGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
P + K +++ W + SD VR SLEEVL+ +AYI YE+I
Sbjct: 1016 SETTGSESEKPLSAAKTRRD-----WAYISDTVVRLASLEEVLKTKAYICMYERI 1065
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 89/230 (38%), Gaps = 76/230 (33%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPE-------- 282
GL N GNTCF NSV+Q L+A L D + T AL + ++ PE
Sbjct: 31 GLINHGNTCFMNSVLQGLIATRYLADLVQFNPMPHSVQTSALTLIASKRSPELTNGHELG 90
Query: 283 --------TGL---------------------RNVINPRSFFGCICSKAPQFKGYQQHDS 313
GL R ++PR + K Q+ ++Q D+
Sbjct: 91 GEWEQPWTAGLPIGDRFVSVMLKAWGLQGKRQRESMSPRDILASLGQKYEQYLDFRQQDA 150
Query: 314 HELLRCLLDGLCSEEL-AFRKRNSPSEGN--GIS-SNQGPV------------------- 350
HE LR LLD + EE+ +KR P + N G S SN P+
Sbjct: 151 HEFLRQLLDAMRMEEVDIIKKRQPPPDKNKKGRSESNIKPLSPPPRSRNVRPTSSPLAQV 210
Query: 351 ----------------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
FVD +FGG++AS + C C H S YE F DLSL
Sbjct: 211 MNGPTEPIPEEERLISFVDMLFGGKLASVLVCQACKHVSHTYEDFNDLSL 260
>gi|4539437|emb|CAB40025.1| putative protein [Arabidopsis thaliana]
gi|7267756|emb|CAB78182.1| putative protein [Arabidopsis thaliana]
Length = 937
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 90/188 (47%), Gaps = 38/188 (20%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIA----LKKLF 276
GL+NLGNTCF NS +Q L + +YFL N G L IA LKKL+
Sbjct: 331 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 390
Query: 277 AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS 336
+ RN + PR+F + APQF GY QHDS ELL LLDGL E+L KR
Sbjct: 391 SSG------RNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNKVKRKP 443
Query: 337 PSE----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
E N + V VD V GQ ST+ C CG S ++PF+
Sbjct: 444 YIELKDSDSRPDDEVAEELWNYHKARNDSVIVD-VCQGQYKSTLVCPACGKISITFDPFM 502
Query: 381 DLSLPVPT 388
LS+P+P+
Sbjct: 503 YLSVPLPS 510
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ +
Sbjct: 801 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYLKNKIDTFVNFPVHDLDLSKYV--KNKN 857
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L V H G + GGHY AY + N+ WYH D +V V+
Sbjct: 858 DQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNE-----------WYHFDDSHVSSVNES 906
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY ++
Sbjct: 907 EIKNSAAYVLFYRRV 921
>gi|353231357|emb|CCD77775.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 563
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL---------TFGPLTIALKKLFAETKP 281
GL NLGNTCF NS++Q L + L +Y L G L + L E
Sbjct: 163 GLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRFLKDINKSSSMNGLLFHSYADLMKEIWD 222
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
+ +P F I AP+F GY Q DS E LR +L+GL E +KR +P + +
Sbjct: 223 PDMANSSTSPSRFKSQIQRFAPRFMGYSQQDSQEFLRYVLEGLHMEVNRVQKRPNPIKPD 282
Query: 342 GISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ + P+FV GQ+ ST+ C EC ST ++PF DLSLP+P K
Sbjct: 283 YEAEDCLPLFV-----GQLMSTLECGECSFKSTTFDPFWDLSLPIPKK 325
>gi|390596584|gb|EIN05985.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1280
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----EL--------------TFGPLTIAL 272
GL NLGNTCF NS +Q L +L +YFLN EL FG L +
Sbjct: 410 GLGNLGNTCFMNSALQCLAHTRELVEYFLNGVYEEELNPDNPLGMGGAIAQAFGALLERM 469
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE----- 327
+ + + I+PR F + APQF GYQQHDS EL+ LLDGL +
Sbjct: 470 WGSPSASSSSSFSSTSISPREFKQALQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRIL 529
Query: 328 --------------ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
EL + S + N V VD +F GQ ST+ C EC S
Sbjct: 530 KKPYVEKPDWEGGGELELVQLAKKSWDGYLQRNDS-VIVD-LFQGQYRSTLVCPECQKVS 587
Query: 374 TVYEPFLDLSLPVPTKK 390
++PF+ L+LP+P KK
Sbjct: 588 ITFDPFMYLTLPLPIKK 604
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 37/175 (21%)
Query: 892 NCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+C +E +K E++ + K + ATK+ + AP IL +HLKRFS ++R K+
Sbjct: 955 DCLNEFTKEEQLGEDDLWYCPQCKKHQQATKKFDLWNAPDILVVHLKRFS-NSRMLRDKI 1013
Query: 946 NGHVNF-------SEIINLRPY--------MDPGCTDHDNYD----YRLVGVVEHLGTMR 986
+ V+F ++ R +D D Y L V EH+G +
Sbjct: 1014 DAFVDFPVNGLSLEGMVQEREVAKHLQAQGVDVASVGLAELDEPLLYDLYAVDEHIGGLG 1073
Query: 987 GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
GGHY AY N+ WYH D +V E + AY+LFY++
Sbjct: 1074 GGHYRAYALNHENNE-----------WYHFDDSFVSPAKAHESVNANAYLLFYKR 1117
>gi|324501191|gb|ADY40532.1| Ubiquitin carboxyl-terminal hydrolase 19 [Ascaris suum]
Length = 1051
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 97/192 (50%), Gaps = 35/192 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF--------LNAE--LTFGPLTIALKKLFAETK 280
GL N+GNTCF N+ +Q L+ +LQ +F +NA L FG L ++FAE
Sbjct: 339 GLRNIGNTCFMNATLQMLVNCKELQIFFTGDYYKKDINATNPLGFGG---RLAEVFAEFM 395
Query: 281 PE--TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS 338
+ +G+ P + KAPQF + QHD+HE L LLDGL E+L R R+ P
Sbjct: 396 KQMWSGMNRAFEPTKVKELVAEKAPQFANFAQHDAHEFLSFLLDGL-HEDLN-RVRSKPY 453
Query: 339 ----EGNGIS----SNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
E NG SN+ VFVD +F GQ+ S ++C C S ++PF+
Sbjct: 454 TTTVEANGRPDIEVSNEAWANHLLRNDSVFVD-LFHGQLKSRLQCPRCDQVSITFDPFVY 512
Query: 382 LSLPVPTKKAPS 393
L++P P +K S
Sbjct: 513 LAVPFPKEKRSS 524
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 33/211 (15%)
Query: 853 CSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGN----------------CESE 896
C ++ +T + + +D S+ ++Q +Q +A N E+E
Sbjct: 833 CGKDYLTVESKVEVDIDAENSA------IHQRAAQTIASNGSSAANPSLYDMLTMFSETE 886
Query: 897 ESKVEE-INSKIVKVKRDATKRVLINKAPPILTIHLKRF----SQDARGRLSKLNGHVNF 951
K EE K +ATKR+ + + PPIL I LKRF S + R SK + V +
Sbjct: 887 RLKPEESWYCNKCKEHVEATKRLQLYRLPPILIIQLKRFVYTTSIMSMHRRSKDDRPVRY 946
Query: 952 S-EIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG 1010
++L ++ + Y L GVV H G+ GHY++ G + K +
Sbjct: 947 PISDLDLSDFLSETAPNGQTTKYDLTGVVCHSGSSYFGHYISM---GRLESLDGKTTEID 1003
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
W + D V ++ V +AY+LFY++
Sbjct: 1004 --WRNFDDSMVSRITPSRVQNDDAYLLFYKQ 1032
>gi|449444827|ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
sativus]
Length = 877
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 109/221 (49%), Gaps = 46/221 (20%)
Query: 201 GSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL- 259
G+G+ S + S+V SGS + + + GL NLGNTCF NS +Q L+ +L DYFL
Sbjct: 250 GTGSA-SCFRVNSSVFSGSSREAGSLGLT-GLQNLGNTCFMNSALQCLVHTPKLVDYFLG 307
Query: 260 --------------NAE--LTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAP 303
N E L FG + L+KL+A + + PR+F + AP
Sbjct: 308 DYGREINHDNPLGMNGEIALAFGDM---LRKLWAPGA------SPVAPRTFKSKLARFAP 358
Query: 304 QFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE---GNGISSNQ------------- 347
QF G QHDS ELL LLDGL E+L K+ E G+G S N+
Sbjct: 359 QFSGCNQHDSQELLAFLLDGL-HEDLNRVKKKPYVEAKDGDGRSDNEVADEYWQNHLARN 417
Query: 348 GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ VD V GQ ST+ C C ST ++PF+ LSLP+P+
Sbjct: 418 DSIIVD-VCQGQYKSTLVCPICKKVSTTFDPFMYLSLPLPS 457
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 23/134 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM----DPGCTDH 968
A+K++ + + P IL IHLKRFS +R +KL +V+F + ++L Y+ CT
Sbjct: 760 ASKKLDLWRLPEILVIHLKRFSY-SRFMKNKLEAYVDFPVDDLDLSMYVAYKNGQSCTR- 817
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
Y L V H G+M GGHY A+V G G WY+ D V + L++
Sbjct: 818 ----YVLYAVSNHYGSMGGGHYTAFVHQG------------GDQWYNFDDSNVYPIGLDK 861
Query: 1029 VLRCEAYILFYEKI 1042
+ C AY+LFY ++
Sbjct: 862 IKSCAAYVLFYRRV 875
>gi|432097481|gb|ELK27673.1| Ubiquitin carboxyl-terminal hydrolase 15, partial [Myotis davidii]
Length = 951
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 260 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 319
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 320 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 379
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C +C S ++PF L+LP
Sbjct: 380 ADGRADKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPKCDKISVTFDPFCYLTLP 437
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 438 LPMKKERTLEVYLVRMDPLTKPMQYKVIVPKIGNI 472
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINL-------RPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F II+L P
Sbjct: 783 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFP-IIDLDMSEFLINPNA 840
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 841 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 882
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 883 STASEDQIVSKAAYVLFYQR 902
>gi|452821245|gb|EME28278.1| ubiquitin carboxyl-terminal hydrolase 16/45 [Galdieria sulphuraria]
Length = 535
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALK-KLFAETKPETGLRNV 288
+GL NLGNTCF N+V+QN+ + L+ YFL +T G + L ++F T +++
Sbjct: 67 KGLKNLGNTCFLNAVLQNIGRLPALRSYFLGQSITSGEHGVTLSLRVFFHTMWLLQDQSI 126
Query: 289 INPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEE-LAFRKRNSPSEGNGISSNQ 347
P + + +F+GY+Q D+HE LR L++ L E + +S S + S++
Sbjct: 127 FRPHKLLDHLGKYSSRFRGYEQQDAHEALRVLMESLMEEATVNMDNSSSDSSSHSDSNHN 186
Query: 348 GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+++ VF G++ S V C +C STV EPFLD+SL + T+
Sbjct: 187 HESWMEKVFLGKLQSCVECEQCHSISTVEEPFLDISLCLETQ 228
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 903 INSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMD 962
++S+ ++ A K L K ++ HLKRF Q K++G ++F NL Y
Sbjct: 401 VSSQQRYIRTKAKKHFLFRKLGQVIIFHLKRFRQ-VGFHFEKVSGKMSFPLEWNLSSYTQ 459
Query: 963 PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRG--GPKNKVKAKKESVGGVWYHASDVY 1020
D DY L G+V H G++ GHY+AY+R P+ WY+ SD +
Sbjct: 460 EQQGDSTENDYYLSGIVVHQGSLEWGHYIAYIRASCSPQEH----------RWYYCSDEH 509
Query: 1021 VREVSLEE-VLRCEAYILFYEK 1041
V V EE + EAYILFY K
Sbjct: 510 VTLVQDEEQIFNSEAYILFYCK 531
>gi|330802246|ref|XP_003289130.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
gi|325080797|gb|EGC34337.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
Length = 810
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 23/138 (16%)
Query: 906 KIVKVKRDATKRVLINKAPPILTIHLKRFS-QDARGRLSKLNGHVNFSEIINLRPYMDPG 964
K+VK A KR+ I+ +PPILT+ +KRFS + G K+N H+ F + +NL PYM
Sbjct: 369 KLVK----AAKRLQIHISPPILTVQIKRFSFLGSYG--GKVNKHIQFEQTLNLSPYMTQA 422
Query: 965 CTDHDNYDYRLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVRE 1023
DH YD L V+ HLG + GHY YV+G G+WY+ D V +
Sbjct: 423 -NDHSIYD--LYAVLVHLGGSTNSGHYYCYVKG------------TNGIWYNMDDSMVSQ 467
Query: 1024 VSLEEVLRCEAYILFYEK 1041
VSL+ VL +AY+LFY K
Sbjct: 468 VSLQTVLGSKAYMLFYSK 485
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE----LTFGPLTI--ALKKLFAETKPETG 284
GL N+GNTCF NSV+Q L L +Y ++ E T I +L++ + TG
Sbjct: 183 GLNNIGNTCFMNSVLQCLTYSPTLANYMISREHSKNCTNKSFCIFCSLEEHIIASHKATG 242
Query: 285 LRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGIS 344
I P+ I AP F+ +Q DSHE +R +++ L L+ + S S + ++
Sbjct: 243 --RSITPKEIAANIRKVAPTFRIGRQEDSHEFIRFVIESLQKVCLSKFPKGSISHRDSMT 300
Query: 345 SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ + +FGG + S V+C C + S ++PF+DL + +
Sbjct: 301 T-----VIGSIFGGYLRSQVKCSVCQYESNTFDPFMDLCVDI 337
>gi|348507904|ref|XP_003441495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Oreochromis niloticus]
Length = 997
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 106/214 (49%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPET 283
GL+NLGNTCF NS +Q L S L +YFL AE+ PL + + + +A+ +
Sbjct: 317 GLSNLGNTCFMNSALQCLSNASPLTEYFLTDQYEAEINRENPLGMRGEIAEAYADLVKQM 376
Query: 284 GLR--NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------RN 335
L + + PR+F + APQF GYQQ DS ELL LLDGL + +K R+
Sbjct: 377 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRD 436
Query: 336 SPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ + I + + + VD +F G ST+ C EC S ++PF L+LP+
Sbjct: 437 AEGRPDEIVAKEAWTNHRLRNDSIIVD-IFHGLFKSTLVCPECSKVSVTFDPFCYLTLPL 495
Query: 387 PTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
P KK + ++ P SR + ++ K G I
Sbjct: 496 PLKKDRTMEVFLVRSDPQSRPTQYRVVVPKLGTI 529
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V+F +N+ ++ DP
Sbjct: 849 KKHQQATKKFDLWSLPRILVVHLKRFSYNRCWR-DKLDTVVDFPIRDLNMSEFVCDPKAG 907
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GGHY AY KNKV K WY+ D V +
Sbjct: 908 P---YIYDLIAVSNHYGGMGGGHYTAY----GKNKVDGK-------WYYFDDSSVSSATE 953
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 954 DQIVTKAAYVLFYQR 968
>gi|157108246|ref|XP_001650143.1| hypothetical protein AaeL_AAEL004980 [Aedes aegypti]
gi|108879378|gb|EAT43603.1| AAEL004980-PA [Aedes aegypti]
Length = 626
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 95/200 (47%), Gaps = 39/200 (19%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYF--------------------LNAELTFGPL 268
V GL NLGNTCF NSV+Q+L + + YF + L +
Sbjct: 228 VVGLRNLGNTCFMNSVLQSLSNIQEFSGYFNTMPSLETGKHKHKAYQSRSMKENLDDVFV 287
Query: 269 TIALKK-LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE 327
L+K L ++ G + I+P F I PQF+G++QHD+HE LR +LD L +E
Sbjct: 288 VEELRKVLLNLSQGGDGSKGAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTE 347
Query: 328 --ELAFR-KRNSPSEGNGISSNQGPV---------------FVDYVFGGQIASTVRCVEC 369
+++F + +SPS + P V VFGG + S VRC+ C
Sbjct: 348 LQQVSFPVEISSPSAQKASETKSNPYNIPALSHLQSKGRNSIVTNVFGGILQSEVRCLIC 407
Query: 370 GHSSTVYEPFLDLSLPVPTK 389
G S ++PFLDLSL +P K
Sbjct: 408 GMESKKHDPFLDLSLDIPEK 427
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF--------SEIINLRPY 960
K K+ +TKR I + P +L +H+KRF + R +K++ ++F ++N P
Sbjct: 475 KCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYR-TKIDLRISFPINALDMSQFVLNNGPE 533
Query: 961 MDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVY 1020
+ + YD V +V H GHY +Y GVW H +D
Sbjct: 534 TRRSNSSCNIYDLAAV-IVHHGNGSSCGHYTSYAINN-------------GVWMHFNDHS 579
Query: 1021 VREVSLEEVLRCEAYILFYEK 1041
V+EVS V C+ YILFY K
Sbjct: 580 VKEVSSSAVAECKPYILFYIK 600
>gi|134106815|ref|XP_777949.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260649|gb|EAL23302.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 659
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 102/218 (46%), Gaps = 47/218 (21%)
Query: 841 EMQSRSSCLR--------DSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGN 892
++SR C R DS S+ +G SV G + G++ E + D++
Sbjct: 291 RVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLA-GFTKEDRLEGDNKYHCER 349
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQD-----ARGRLSKLNG 947
C K K +ATK I++APPILT+HLKRFS + R R K N
Sbjct: 350 C---------------KRKANATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQ 394
Query: 948 HVNFSEIINLRPYM-DPGCTDHDNYDYRLVGVVEHLGT-MRGGHYVAYVRGGPKNKVKAK 1005
+ F + +++ PYM DP YRL GV H GT +R GHY +YVRG
Sbjct: 395 PIKFEQTLDIAPYMVDPASP---GTKYRLFGVTCHRGTELRFGHYTSYVRG--------- 442
Query: 1006 KESVGGVWYHASDVYVREVSLEEVLRCE-AYILFYEKI 1042
G W+HA D V V LE+VL + AY+L Y ++
Sbjct: 443 ---PSGQWFHADDDEVSPVQLEQVLNDKTAYLLSYIRV 477
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 305 FKGYQQHDSHELLRCLLDGLCSEELA----------FRKRNSPSEGNGISSNQGPVFVDY 354
F +Q D+HE R + D L + LA RK + + + +V
Sbjct: 227 FSKNRQEDTHEFFRFVTDALQNTALAKLPKCVLPYNHRKFAHTTSRDTPEKIKHTSWVYR 286
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
++GG++ S V C C + S ++ FLDLSL V
Sbjct: 287 IWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDV 318
>gi|26327595|dbj|BAC27541.1| unnamed protein product [Mus musculus]
Length = 699
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 36 GLTNLGNTCFMNSAQQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 95
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G I P F + A QF GYQQHDS ELL LLDGL + +K+ N
Sbjct: 96 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCN 155
Query: 342 GI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 156 GAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 214
Query: 387 PT 388
P
Sbjct: 215 PV 216
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P +L IHLKRFS + +R +L L ++FSE + ++P + +
Sbjct: 548 ATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFV-IKPKNE---SS 603
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 604 PDLYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 652
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 653 QIESKAAYVLFYQR 666
>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
Length = 606
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 24/213 (11%)
Query: 203 GNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE 262
G + + S S+ ++ + + GL NLGNTCF NS++Q L +L+DY L
Sbjct: 241 GKGQALVSSRSSSPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ-R 299
Query: 263 LTFGPLT------IALKKLFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS 313
L L+ AL + FA +T + +V++P F I AP+F GY Q D+
Sbjct: 300 LYLRDLSHSSRAHTALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDA 359
Query: 314 HELLRCLLDGLCSEE---LAFRKRNSPSEGNGISSNQG-PVFVDYV----------FGGQ 359
E LR LLDGL +E +A K N+ + + +G ++ Y+ F GQ
Sbjct: 360 QEFLRFLLDGLHNEVNRVIARPKSNTENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQ 419
Query: 360 IASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
+ S++ C +CG+ STV++PF DLSLP+ + P
Sbjct: 420 LKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYP 452
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 488 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTAFVNFPLRDLDLREFASEN-TNHAVYN-- 543
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVSPMSSSQVRTSDA 592
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 593 YLLFYE 598
>gi|218187268|gb|EEC69695.1| hypothetical protein OsI_39158 [Oryza sativa Indica Group]
Length = 868
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 99/195 (50%), Gaps = 38/195 (19%)
Query: 216 VSGSDLD--GNACYV---VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTI 270
+ G DLD G++ V + GL NLGNTCF NS +Q L S+L + +FG L
Sbjct: 252 IMGMDLDSSGSSKQVGTGLIGLDNLGNTCFMNSAVQCLAHTSKLGE----LAYSFGDL-- 305
Query: 271 ALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELA 330
L+KL+A R + PR F G + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 306 -LRKLWALD------RTPVAPRQFKGKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN 357
Query: 331 FRKRNSPSE-----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
K SE GN I+ N + VD + GQ ST+ C +C S
Sbjct: 358 RVKCKPYSEAKDSDGRPDEEVADEYWGNHIARNDS-IIVD-ICQGQYKSTLVCPDCRKVS 415
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 416 VTFDPFMYLSLPLPS 430
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A+K++ + + P IL IHLKRFS +R +KL V+F ++L Y+
Sbjct: 726 KEHRQASKKLDLWRLPEILIIHLKRFSY-SRYTKNKLETCVDFPVHDLDLSKYIGSRGQQ 784
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
N+ YRL + H G+M GGHY AYV K WY D +V +S E
Sbjct: 785 ISNH-YRLYAISNHYGSMGGGHYTAYVYHEGKKG-----------WYDFDDRHVGPISEE 832
Query: 1028 EVLRCEAYILFYEKI 1042
+ AY+LFY +I
Sbjct: 833 SIKTSAAYVLFYRRI 847
>gi|432118439|gb|ELK38093.1| Ubiquitin carboxyl-terminal hydrolase 11 [Myotis davidii]
Length = 513
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFL EL F PL + + + +A+ +
Sbjct: 256 GLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLDELNFCNPLGMKGEIAEAYADLVKQA 315
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 316 WSGRHRSIVPNVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVEQCD 375
Query: 335 --NSPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + + Q V VD F G ST+ C +CGH S ++PF LS+P+
Sbjct: 376 AAGRPDQEVAVEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGHVSVTFDPFCYLSVPL 434
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 435 PVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 468
>gi|297613547|ref|NP_001067298.2| Os12g0621000 [Oryza sativa Japonica Group]
gi|255670491|dbj|BAF30317.2| Os12g0621000 [Oryza sativa Japonica Group]
Length = 864
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 99/195 (50%), Gaps = 38/195 (19%)
Query: 216 VSGSDLD--GNACYV---VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTI 270
+ G DLD G++ V + GL NLGNTCF NS +Q L S+L + +FG L
Sbjct: 252 IMGMDLDSSGSSKQVGTGLIGLDNLGNTCFMNSAVQCLAHTSKLGE----LAYSFGDL-- 305
Query: 271 ALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELA 330
L+KL+A R + PR F G + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 306 -LRKLWALD------RTPVAPRQFKGKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN 357
Query: 331 FRKRNSPSE-----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
K SE GN I+ N + VD + GQ ST+ C +C S
Sbjct: 358 RVKCKPYSEAKDSDGRPDEEVADEYWGNHIARNDS-IIVD-ICQGQYKSTLVCPDCRKVS 415
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 416 VTFDPFMYLSLPLPS 430
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A+K++ + + P IL IHLKRFS +R +KL V+F ++L Y+
Sbjct: 722 KEHRQASKKLDLWRLPEILIIHLKRFSY-SRYTKNKLETCVDFPVHDLDLSKYIGSRGQQ 780
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
N+ YRL + H G+M GGHY AYV K WY D +V +S E
Sbjct: 781 ISNH-YRLYAISNHYGSMGGGHYTAYVYHEGKKG-----------WYDFDDRHVGPISEE 828
Query: 1028 EVLRCEAYILFYEKI 1042
+ AY+LFY +I
Sbjct: 829 SIKTSAAYVLFYRRI 843
>gi|66800105|ref|XP_628978.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60462340|gb|EAL60562.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1085
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----------FGPLTIALKKLFA 277
+ GL NLGNTCF NS +Q L L YFL+ + G L +L
Sbjct: 337 ITGLGNLGNTCFMNSALQCLSNTYPLTKYFLSKQYENDINKTNPLGCHGDLATDYAELIT 396
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
E G + + PR F G I APQF GY QHDS ELL LLDGL E+L K+
Sbjct: 397 EIW--EGTYSSVYPRKFKGQIERFAPQFAGYHQHDSQELLAFLLDGL-HEDLNKVKKKPF 453
Query: 338 SEGNGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
EG S V VD+ F Q+ S + C C + S ++PF+
Sbjct: 454 HEGKDYDGRPDDVIAKEQWEMHKSRNNSVIVDW-FQSQLKSKLVCPVCQNISITFDPFMY 512
Query: 382 LSLPVPTK 389
LSLP+P++
Sbjct: 513 LSLPLPSE 520
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 25/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K + ATK+ I +PPIL +HLKRFS R KL+ V F P+ D + +
Sbjct: 860 KEHQRATKKFDIWSSPPILVVHLKRFSY-KRSHRDKLDTLVKF-------PFKDLDLSQY 911
Query: 969 D-NYD-----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR 1022
N D Y L V H G++ GGHY A+ P++ W+ D +
Sbjct: 912 VLNKDQPAPIYDLFAVSNHYGSLGGGHYTAFALNEPED-----------TWFKFDDSHAS 960
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
E ++ + AY+LFY +
Sbjct: 961 EANINSIESDAAYVLFYRR 979
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 28/181 (15%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYF---------LNAELTFGPLTIALKKLFAET 279
+ GL NLGNTCF N+V+Q+L + + YF N + + +++
Sbjct: 223 IVGLKNLGNTCFMNAVLQSLNNIQEFSYYFSQLPSLEMKTNGRKVYHSRSYTRQEMHDVV 282
Query: 280 KPE-------------TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCS 326
E G + I+P F I P+F+GYQQ D+HE LR +LD L +
Sbjct: 283 MAEELRKVLINLNTGGCGSKAAISPECLFLVIWKVVPRFRGYQQQDAHEFLRYMLDRLHT 342
Query: 327 EELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
E ++ P G+ + V VFGG + S VRC+ CG S ++PFLDLSL +
Sbjct: 343 E----LQQLVPDRPEGVKAPAS--IVTAVFGGTLQSEVRCLACGTESKKFDPFLDLSLEL 396
Query: 387 P 387
P
Sbjct: 397 P 397
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTD 967
K K+ +TK+ I + P +L +HLKRF R +K++ ++F + +++ ++ P D
Sbjct: 433 KCKQKSTKQFWIRRLPNVLCLHLKRFRWHNYFR-TKVDTSISFPLLSLDMSGFVLPNVPD 491
Query: 968 -----HDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
+ Y L V+ H G+ G GHY A+ + W+H +D V
Sbjct: 492 TRRSGRGSLLYDLAAVIVHHGSGAGSGHYTAFAINEEQ-------------WFHFNDQTV 538
Query: 1022 REVSLEEVLRCEAYILFY 1039
R V C+ YILFY
Sbjct: 539 RATDSAAVASCKPYILFY 556
>gi|4115922|gb|AAD03433.1| contains similarity to ubiquitin carboxyl-terminal hydrolase family
2 (Pfam:PF00443, score=48.3, E=3.5e-13, N=2) and
(Pfam:PF00442, Score=40.0 E=5.2e-08, N=1) [Arabidopsis
thaliana]
Length = 1028
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 90/188 (47%), Gaps = 38/188 (20%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIA----LKKLF 276
GL+NLGNTCF NS +Q L + +YFL N G L IA LKKL+
Sbjct: 334 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 393
Query: 277 AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS 336
+ RN + PR+F + APQF GY QHDS ELL LLDGL E+L KR
Sbjct: 394 SSG------RNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNKVKRKP 446
Query: 337 PSE----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
E N + V VD V GQ ST+ C CG S ++PF+
Sbjct: 447 YIELKDSDSRPDDEVAEELWNYHKARNDSVIVD-VCQGQYKSTLVCPVCGKISITFDPFM 505
Query: 381 DLSLPVPT 388
LS+P+P+
Sbjct: 506 YLSVPLPS 513
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ +
Sbjct: 804 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYLKNKIDTFVNFPVHDLDLSKYVK--NKN 860
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK--------VKAKKESVGGV------- 1012
+Y Y L V H G + GGHY AY + N V A + SV +
Sbjct: 861 GQSYLYELYAVSNHYGGLGGGHYTAYAKVDLYNIYPLDSCPIVLATRSSVSSLFDHYVSI 920
Query: 1013 ---------WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
WYH D +V V+ E+ AY+LFY ++
Sbjct: 921 FMQLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLFYRRV 959
>gi|222617496|gb|EEE53628.1| hypothetical protein OsJ_36905 [Oryza sativa Japonica Group]
Length = 882
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 99/195 (50%), Gaps = 38/195 (19%)
Query: 216 VSGSDLD--GNACYV---VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTI 270
+ G DLD G++ V + GL NLGNTCF NS +Q L S+L + +FG L
Sbjct: 266 IMGMDLDSSGSSKQVGTGLIGLDNLGNTCFMNSAVQCLAHTSKLGE----LAYSFGDL-- 319
Query: 271 ALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELA 330
L+KL+A R + PR F G + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 320 -LRKLWALD------RTPVAPRQFKGKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN 371
Query: 331 FRKRNSPSE-----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
K SE GN I+ N + VD + GQ ST+ C +C S
Sbjct: 372 RVKCKPYSEAKDSDGRPDEEVADEYWGNHIARNDS-IIVD-ICQGQYKSTLVCPDCRKVS 429
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 430 VTFDPFMYLSLPLPS 444
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A+K++ + + P IL IHLKRFS +R +KL V+F ++L Y+
Sbjct: 740 KEHRQASKKLDLWRLPEILIIHLKRFSY-SRYTKNKLETCVDFPVHDLDLSKYIGSRGQQ 798
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
N+ YRL + H G+M GGHY AYV K WY D +V +S E
Sbjct: 799 ISNH-YRLYAISNHYGSMGGGHYTAYVYHEGKKG-----------WYDFDDRHVGPISEE 846
Query: 1028 EVLRCEAYILFYEKI 1042
+ AY+LFY +I
Sbjct: 847 SIKTSAAYVLFYRRI 861
>gi|166240137|ref|XP_001733062.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|165988448|gb|EDR41009.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1021
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----------FGPLTIALKKLFA 277
+ GL NLGNTCF NS +Q L L YFL+ + G L +L
Sbjct: 273 ITGLGNLGNTCFMNSALQCLSNTYPLTKYFLSKQYENDINKTNPLGCHGDLATDYAELIT 332
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
E G + + PR F G I APQF GY QHDS ELL LLDGL E+L K+
Sbjct: 333 EIW--EGTYSSVYPRKFKGQIERFAPQFAGYHQHDSQELLAFLLDGL-HEDLNKVKKKPF 389
Query: 338 SEGNGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
EG S V VD+ F Q+ S + C C + S ++PF+
Sbjct: 390 HEGKDYDGRPDDVIAKEQWEMHKSRNNSVIVDW-FQSQLKSKLVCPVCQNISITFDPFMY 448
Query: 382 LSLPVPTK 389
LSLP+P++
Sbjct: 449 LSLPLPSE 456
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 25/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K + ATK+ I +PPIL +HLKRFS R KL+ V F P+ D + +
Sbjct: 796 KEHQRATKKFDIWSSPPILVVHLKRFSY-KRSHRDKLDTLVKF-------PFKDLDLSQY 847
Query: 969 D-NYD-----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR 1022
N D Y L V H G++ GGHY A+ P++ W+ D +
Sbjct: 848 VLNKDQPAPIYDLFAVSNHYGSLGGGHYTAFALNEPED-----------TWFKFDDSHAS 896
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
E ++ + AY+LFY +
Sbjct: 897 EANINSIESDAAYVLFYRR 915
>gi|341897552|gb|EGT53487.1| hypothetical protein CAEBREN_19011 [Caenorhabditis brenneri]
Length = 902
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 90/194 (46%), Gaps = 32/194 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL+NLGNTCF S Q L + L+DYF+N E T G L +A+ L
Sbjct: 282 GLSNLGNTCFMASAFQCLSNIPPLRDYFINEEYLQDLNEENPLGTHGNLAVAVGDLMKGM 341
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G INPR F G I AP+F GY Q D+HEL+ +LDGL E+L K+ E
Sbjct: 342 W--SGEYASINPRKFKGIIGQFAPRFNGYSQQDAHELMAYVLDGL-HEDLNRIKKKPYIE 398
Query: 340 GNG-----------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
N + VD GQ+ ST+ C C S ++PF L
Sbjct: 399 DNDEDAKLPEAEYAAKSWQVYKMRNDSIIVD-TLHGQLRSTLICPVCQKISIKFDPFGYL 457
Query: 383 SLPVPTKKAPSKKT 396
SLP+P K+ K+T
Sbjct: 458 SLPLPPKEQIVKQT 471
>gi|389745737|gb|EIM86918.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 1356
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 84/192 (43%), Gaps = 36/192 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-----------NAELTFGPLTIALKKLFAET 279
GL N+GNTCF NS +Q L + +L +YFL N G + + L
Sbjct: 386 GLGNMGNTCFMNSALQCLAHLQELTEYFLYGVFKDELNPDNPLGMHGEIAESFGALLHRI 445
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE------------ 327
+ +PR F + APQF GYQQHDS EL+ LLDGL +
Sbjct: 446 WSPSSASTSYSPREFKSALQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEK 505
Query: 328 ---------ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEP 378
E+ R S G V VD +F GQ ST+ C EC S ++P
Sbjct: 506 PDWEGGGDKEVMALARES---WEGYMKRNDSVIVD-LFQGQYKSTLVCPECEKVSITFDP 561
Query: 379 FLDLSLPVPTKK 390
F+ L+LP+P +K
Sbjct: 562 FMYLTLPLPVQK 573
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 33/154 (21%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLR--- 958
K + ATK+ + + P +L +HLKRFS ++R K+ V+F +E+ R
Sbjct: 969 KKHQQATKKFDLWRVPDVLVVHLKRFS-NSRALRDKIEAFVDFPVNGLDLTEMAEERRVG 1027
Query: 959 -------PYMDPGCTDHDNYD----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKE 1007
DP ++ D Y L V EHLG + GGHY AY +
Sbjct: 1028 KKLAEDGSLADPSALGLEDLDEPLVYDLFAVDEHLGGLGGGHYRAYAQN----------- 1076
Query: 1008 SVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
V G WYH D YV + AY+LFY++
Sbjct: 1077 HVSGDWYHFDDSYVTRAEPHAAVNPNAYLLFYKR 1110
>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cavia porcellus]
Length = 396
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 38/192 (19%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGL----- 285
GL NLGNTCF NS++Q L +L+DY L + ++ L + TGL
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQR--------LYMRDLSHTSSVHTGLMEEFA 110
Query: 286 -----------RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFR 332
+V++P F I AP+F GY Q D+ E LR LLDGL +E +A R
Sbjct: 111 KLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAVR 170
Query: 333 KRNSPSEGNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFL 380
++S + + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF
Sbjct: 171 PKSSHENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 230
Query: 381 DLSLPVPTKKAP 392
DLSLP+ + P
Sbjct: 231 DLSLPIAKRGYP 242
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL+ VNF ++LR + T+H Y+
Sbjct: 278 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLSTFVNFPLRDLDLREFASEN-TNHAVYN-- 333
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 334 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 382
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 383 YLLFYE 388
>gi|292615153|ref|XP_002662557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Danio
rerio]
Length = 958
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPET 283
GL+NLGNTCF NS +Q L L +YFL AE+ PL + + + +A+ +
Sbjct: 269 GLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADLVKQM 328
Query: 284 GLR--NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------RN 335
L + + PR+F + APQF GYQQ DS ELL LLDGL + +K R+
Sbjct: 329 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRD 388
Query: 336 SPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ + I + + + VD +F G ST+ C EC S ++PF L+LP+
Sbjct: 389 AEGRPDEIVAKEAWANHRLRNDSIIVD-IFHGLFKSTLVCPECSKVSVTFDPFCYLTLPL 447
Query: 387 PTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
P KK + +T P RA + ++ K G +
Sbjct: 448 PMKKDRTMEVYLVRTDPQFRAMQFRVVVPKMGAV 481
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V+F +N+ ++ DP
Sbjct: 810 KKHQQATKKFDLWSLPRILVVHLKRFSYNRCWR-DKLDTVVDFPIRDLNMSEFVCDPKA- 867
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
D Y Y L+ V H G M GGHY AY KNK K WY+ D V +
Sbjct: 868 --DPYIYDLIAVSNHYGGMGGGHYTAY----GKNKADGK-------WYYFDDSSVSAATE 914
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 915 DQIVTKAAYVLFYQR 929
>gi|297606766|ref|NP_001058936.2| Os07g0160000 [Oryza sativa Japonica Group]
gi|255677531|dbj|BAF20850.2| Os07g0160000 [Oryza sativa Japonica Group]
Length = 911
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 92/193 (47%), Gaps = 48/193 (24%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAELT--FGPLTIALK 273
GL NLGNTCF NS +Q L S+L DYFL N EL FG L L+
Sbjct: 263 GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGEL---LR 319
Query: 274 KLF-AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
+L+ E KP ++P F I APQF G+ QHDS ELL LLDGL E+L
Sbjct: 320 RLWNTERKP-------VSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGL-HEDLNQV 371
Query: 333 KRNSPSEG-----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTV 375
K E N ++ N V VD + GQ ST+ C C +S
Sbjct: 372 KCKPYEEAKDASGRPDKEVADEYWSNHLARNDS-VIVD-TYHGQYKSTLTCPTCSKTSVT 429
Query: 376 YEPFLDLSLPVPT 388
++PF+ LSLPVP+
Sbjct: 430 FDPFMYLSLPVPS 442
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + A K++ + + P +L IHLKRFS R +KL V+F ++L Y+
Sbjct: 764 KKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTR-NKLETFVDFPISDLDLSSYIIDKSEL 822
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D + YRL + H G M GGHY A + G WY D VR ++ +
Sbjct: 823 SDCH-YRLYAISNHYGNMGGGHYTASIY-----------HEEGKGWYKFDDECVRPITED 870
Query: 1028 EVLRCEAY 1035
+ AY
Sbjct: 871 SIKTPAAY 878
>gi|18858145|ref|NP_572220.1| CG4165, isoform A [Drosophila melanogaster]
gi|24639861|ref|NP_726993.1| CG4165, isoform B [Drosophila melanogaster]
gi|24639863|ref|NP_726994.1| CG4165, isoform C [Drosophila melanogaster]
gi|24639865|ref|NP_726995.1| CG4165, isoform D [Drosophila melanogaster]
gi|7290583|gb|AAF46033.1| CG4165, isoform A [Drosophila melanogaster]
gi|15292003|gb|AAK93270.1| LD34905p [Drosophila melanogaster]
gi|22831738|gb|AAN09140.1| CG4165, isoform B [Drosophila melanogaster]
gi|22831739|gb|AAN09141.1| CG4165, isoform C [Drosophila melanogaster]
gi|22831740|gb|AAN09142.1| CG4165, isoform D [Drosophila melanogaster]
gi|220947308|gb|ACL86197.1| CG4165-PA [synthetic construct]
gi|220956780|gb|ACL90933.1| CG4165-PA [synthetic construct]
Length = 1126
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 103/221 (46%), Gaps = 54/221 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLA----------MSQLQDYFLNAELTF------------- 265
VRGL NLGNTCFFN+VMQ L +S+ + F+ TF
Sbjct: 305 VRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMI 364
Query: 266 -------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
G LT AL E + +V PR F +C K PQF G QHD+HELLR
Sbjct: 365 KGTLSSWGGLTAALANALEELQAGG---SVFTPRKLFDRLCVKCPQFTGGDQHDAHELLR 421
Query: 319 CLLDGLCSEELAFRKR-------------NSPSEGN----GISSNQGPVFV---DYVFGG 358
LL+ + +E+L +R NS SE I NQ + + VF G
Sbjct: 422 QLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRG 481
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA-PSKKTQP 398
+ ST+ C +C + S+ +E FLD+SLPV +K P ++ +P
Sbjct: 482 FLVSTLTCQDCHNVSSRHEYFLDMSLPVAVEKPQPPQRRKP 522
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 862 DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLIN 921
++G CSV ++ ++A ++ +++ C+S ++ + K V +ATK++L++
Sbjct: 854 EDGECSVQSCLNN-FTAVELMTGQNKV---GCDSCTQRINGSDPKAKSVNTNATKQLLVS 909
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YR 974
P +L +HLKRF R KL V++ ++++ + + N D Y
Sbjct: 910 SPPAVLILHLKRFQLGPRCIFRKLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKLLYA 969
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPK 999
L GVVEH G M GGHY AYV+ PK
Sbjct: 970 LYGVVEHSGGMYGGHYTAYVKVRPK 994
Score = 44.3 bits (103), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ SD V+EVS + L+ +AY+LFYE+I
Sbjct: 1094 GKWYYVSDSRVQEVSEDTALKAQAYLLFYERI 1125
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 330 NSSLNSKLLKVNGS----TTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVE 385
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 386 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 445
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S + ++ +S S N N V +F
Sbjct: 446 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIF 505
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 506 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 538
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 591 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 649
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 650 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 696
Query: 1037 LFY 1039
LFY
Sbjct: 697 LFY 699
>gi|224056675|ref|XP_002298967.1| predicted protein [Populus trichocarpa]
gi|222846225|gb|EEE83772.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIALKKLFAE 278
+ GL N+GNTCF NS +Q L+ QL +YFL N G L +A L
Sbjct: 322 LAGLQNMGNTCFMNSALQCLVHTPQLVEYFLQDYSEEINTQNPLGMHGELALAFGDLL-- 379
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS 338
K + R + PR F G + APQF GY QHDS ELL LLDGL E+L K+
Sbjct: 380 RKLWSSGRTAVAPRVFKGKLALFAPQFSGYNQHDSQELLAFLLDGL-HEDLNRVKQKPYI 438
Query: 339 EGNGIS----------------SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
E S + V VD V GQ ST+ C C S ++PF+ L
Sbjct: 439 EMKDWSGEPDEEIADECWRNHKARNDSVIVD-VCQGQYKSTLVCPICSKISVTFDPFMYL 497
Query: 383 SLPVPT 388
SLP+P+
Sbjct: 498 SLPLPS 503
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R ATK++ + P IL HLKRFS +R +KL+ V+F ++L Y+ D
Sbjct: 795 KEHRQATKKLDLWMLPDILVFHLKRFSY-SRYLKNKLDTFVDFPIHNLDLSKYVKK--ND 851
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L + H G + GGHY A+ + +N+ WY D V V+ +
Sbjct: 852 GHSFTYELFAISNHYGGLGGGHYTAFAKLIDENR-----------WYSFDDSRVSPVNED 900
Query: 1028 EVLRCEAYILFYEKI 1042
++ AY+LFY ++
Sbjct: 901 DIKTSAAYVLFYRRV 915
>gi|326668740|ref|XP_002662556.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Danio
rerio]
Length = 1009
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPET 283
GL+NLGNTCF NS +Q L L +YFL AE+ PL + + + +A+ +
Sbjct: 320 GLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADLVKQM 379
Query: 284 GLR--NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------RN 335
L + + PR+F + APQF GYQQ DS ELL LLDGL + +K R+
Sbjct: 380 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRD 439
Query: 336 SPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ + I + + + VD +F G ST+ C EC S ++PF L+LP+
Sbjct: 440 AEGRPDEIVAKEAWANHRLRNDSIIVD-IFHGLFKSTLVCPECSKVSVTFDPFCYLTLPL 498
Query: 387 PTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
P KK + +T P RA + ++ K G +
Sbjct: 499 PMKKDRTMEVYLVRTDPQFRAMQFRVVVPKMGAV 532
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V+F +N+ ++ DP
Sbjct: 861 KKHQQATKKFDLWSLPRILVVHLKRFSYNRCWR-DKLDTVVDFPIRDLNMSEFVCDPKA- 918
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
D Y Y L+ V H G M GGHY AY KNK K WY+ D V +
Sbjct: 919 --DPYIYDLIAVSNHYGGMGGGHYTAY----GKNKADGK-------WYYFDDSSVSAATE 965
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 966 DQIVTKAAYVLFYQR 980
>gi|393222219|gb|EJD07703.1| UCH-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1210
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 91/198 (45%), Gaps = 37/198 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----NAELTF-GPLTI--ALKKLFAETKPET 283
G +N+GNTCF NS +Q L+ +L +YFL EL PL + A+ + F
Sbjct: 343 GFSNMGNTCFMNSALQCLVHTQELVEYFLTRVYQGELNPDNPLGMQGAIAEAFGVVMDRV 402
Query: 284 GL--RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE-------------- 327
L V PR F + APQF GYQQHDS EL+ LLDGL +
Sbjct: 403 WLPQSTVYAPREFKMQLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPD 462
Query: 328 -------ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
EL + S G V VD +F GQ ST+ C EC S ++PF+
Sbjct: 463 WNGGGDKELVALAKES---WEGYKKRNDSVIVD-LFQGQYRSTLVCPECKRVSITFDPFM 518
Query: 381 DLSLPVPTKKAPSKKTQP 398
L+LP+P +K K T P
Sbjct: 519 YLTLPLPVQK---KWTHP 533
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 37/179 (20%)
Query: 888 LVAGNCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRFSQDARGR 941
+ +C E ++ EE+ + + K + ATK+ + P IL +HLKRFS ++R
Sbjct: 864 ITLNDCLDEFTREEELGEEDLWYCSKCKKHQPATKKFDLWTIPDILVVHLKRFS-NSRIL 922
Query: 942 LSKLNGHVNFS-EIINLRPYMDP-----------------GCTDHDN-YDYRLVGVVEHL 982
K++ V+F E ++L + G +D + Y L V EH+
Sbjct: 923 RDKIDAFVDFPVEGLDLEAFSGEREVAKRLAQEGHDVKALGVSDAEEPLLYDLYAVDEHM 982
Query: 983 GTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
G + GGHY AY + +K WYH D +V + + AY+LFY++
Sbjct: 983 GGLGGGHYRAYAKNHETDK-----------WYHFDDTHVSVADPADAVNRSAYLLFYKR 1030
>gi|290996750|ref|XP_002680945.1| ubiquitin specific hydrolase [Naegleria gruberi]
gi|284094567|gb|EFC48201.1| ubiquitin specific hydrolase [Naegleria gruberi]
Length = 966
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 29/188 (15%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----------GPLTIALKKLFA 277
V GL+NLGNTCF NS +Q L L YFL + + G + +A L
Sbjct: 298 VCGLSNLGNTCFMNSGLQCLTHSPVLYRYFLENDYSKEINETNPLGMGGAVALAFGALMK 357
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR--N 335
E +G + +P F I APQF GYQQ DS EL+ +LDGL + +K+
Sbjct: 358 EMW--SGENSYFSPNDFKRVIGKYAPQFAGYQQQDSQELISFILDGLHEDLNRIQKKPAT 415
Query: 336 SPSEGNGISSN-------------QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+P E G + + VD F GQ+ ST+ C +C + S +++PF+ L
Sbjct: 416 NPVEAKGREDSVVAQESWDVHKLRNDSIIVD-KFQGQLKSTLHCPKCDNFSIIFDPFMYL 474
Query: 383 SLPVPTKK 390
SLP+P +K
Sbjct: 475 SLPIPIEK 482
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 913 DATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD 972
+ATK+ I KAP +L +HLKRFS + R K++ +++ I +L C D N
Sbjct: 849 EATKKFDIWKAPDVLVVHLKRFSFSSYSR-DKIDRFIDYP-IQDLDISSFVHCKDL-NLK 905
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L V +H G + GGHY A K + G WY D EV E ++
Sbjct: 906 YDLFAVSDHFGGLGGGHYTA-----------CAKNHIDGKWYKFDDSRSSEVHNPESIKA 954
Query: 1033 EA-YILFY 1039
+ Y+LFY
Sbjct: 955 SSNYVLFY 962
>gi|402223753|gb|EJU03817.1| UCH-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 970
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 86/198 (43%), Gaps = 40/198 (20%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------------------TFGPLTIAL 272
GLANLGNTCF NS +Q L +L +YFL FG L L
Sbjct: 24 GLANLGNTCFMNSAVQCLAHTEELAEYFLTGVFRTEINRTNPLGMGGQIAEAFGALMNRL 83
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEEL--- 329
+ + +PR F + APQF GY QHDS ELL LLDGL E+L
Sbjct: 84 WGPVTASNGSYSSGSSYSPREFKSILAKFAPQFSGYMQHDSQELLAFLLDGL-HEDLNRV 142
Query: 330 ----AFRKRNSPSEG-------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHS 372
K + P +G +G V VD +F GQ ST+ C EC
Sbjct: 143 LTKPYVEKPDWPGKGGPKELIAFAKECWDGYLKRNDSVIVD-LFQGQYKSTLVCPECAKV 201
Query: 373 STVYEPFLDLSLPVPTKK 390
S ++P++ L+LP+P +
Sbjct: 202 SITFDPYMYLTLPLPINR 219
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 90/214 (42%), Gaps = 42/214 (19%)
Query: 855 QESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIV------ 908
++ T DE VD ++ AEK + +C SE ++ E++ +
Sbjct: 566 EDPYTTWDEFEDIVDPTIATSDEAEKT-AGKKGISLYDCLSEFTREEQLGEDDLWYCPQC 624
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRL--SKLNGHVNFS-EIINL-------- 957
K + ATK+ I P IL +HLKRFS GRL KL+ V+F E ++L
Sbjct: 625 KKHQQATKKFEIWSVPDILVVHLKRFSS---GRLLRDKLDMMVDFPLEGLDLEGRVEEKL 681
Query: 958 ---RPYMDPGCTDHDNYD-------YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKE 1007
R G + N D Y L V EHLG + GGHY AY K
Sbjct: 682 EWKRMREAEGKANEKNGDPEEEPITYDLFAVDEHLGGLGGGHYRAYA-----------KN 730
Query: 1008 SVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
G+WYH D +V + + AY+LFY +
Sbjct: 731 YADGLWYHFDDSHVTQADPAAAVNRNAYLLFYRR 764
>gi|218199123|gb|EEC81550.1| hypothetical protein OsI_24972 [Oryza sativa Indica Group]
Length = 885
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 92/193 (47%), Gaps = 48/193 (24%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAELT--FGPLTIALK 273
GL NLGNTCF NS +Q L S+L DYFL N EL FG L L+
Sbjct: 263 GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGEL---LR 319
Query: 274 KLF-AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
+L+ E KP ++P F I APQF G+ QHDS ELL LLDGL E+L
Sbjct: 320 RLWNTERKP-------VSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGL-HEDLNQV 371
Query: 333 KRNSPSEG-----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTV 375
K E N ++ N V VD + GQ ST+ C C +S
Sbjct: 372 KCKPYEEAKDASGRPDKEVADEYWSNHLARNDS-VIVD-TYHGQYKSTLTCPTCSKTSVT 429
Query: 376 YEPFLDLSLPVPT 388
++PF+ LSLPVP+
Sbjct: 430 FDPFMYLSLPVPS 442
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + A K++ + + P +L IHLKRFS R +KL V+F ++L Y+
Sbjct: 764 KKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTR-NKLETFVDFPISDLDLSSYIIDKSEL 822
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D + YRL + H G M GGHY A + G WY D VR ++ +
Sbjct: 823 SDCH-YRLYAISNHYGNMGGGHYTASIY-----------HEEGKGWYKFDDECVRPITED 870
Query: 1028 EVLRCEAYILFYEK 1041
+ AY+LFY +
Sbjct: 871 SIKTPAAYVLFYRR 884
>gi|222636464|gb|EEE66596.1| hypothetical protein OsJ_23160 [Oryza sativa Japonica Group]
Length = 885
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 92/193 (47%), Gaps = 48/193 (24%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAELT--FGPLTIALK 273
GL NLGNTCF NS +Q L S+L DYFL N EL FG L L+
Sbjct: 263 GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGEL---LR 319
Query: 274 KLF-AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
+L+ E KP ++P F I APQF G+ QHDS ELL LLDGL E+L
Sbjct: 320 RLWNTERKP-------VSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGL-HEDLNQV 371
Query: 333 KRNSPSEG-----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTV 375
K E N ++ N V VD + GQ ST+ C C +S
Sbjct: 372 KCKPYEEAKDASGRPDKEVADEYWSNHLARNDS-VIVD-TYHGQYKSTLTCPTCSKTSVT 429
Query: 376 YEPFLDLSLPVPT 388
++PF+ LSLPVP+
Sbjct: 430 FDPFMYLSLPVPS 442
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + A K++ + + P +L IHLKRFS R +KL V+F ++L Y+
Sbjct: 764 KKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTR-NKLETFVDFPISDLDLSSYIIDKSEL 822
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D + YRL + H G M GGHY A + G WY D VR ++ +
Sbjct: 823 SDCH-YRLYAISNHYGNMGGGHYTASIY-----------HEEGKGWYKFDDECVRPITED 870
Query: 1028 EVLRCEAYILFYEK 1041
+ AY+LFY +
Sbjct: 871 SIKTPAAYVLFYRR 884
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 137/322 (42%), Gaps = 45/322 (13%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVI-----QWENPHLRWCFPCN 158
+K+ WVCL C CG H +H + PL + + P C C+
Sbjct: 35 NKSPWVCLTCSSVHCG-----RYVNGHAKKHYEDAQVPLTNHKKSEKQDKPQHTVCMDCS 89
Query: 159 TL-IPVEKTEENGENKDALSEVVKLIKG-RSTEISSVDVEDAWFGSGNVNSEIKSESTVV 216
+ + ++ N L V K+ + ++ E S+ + NS + S+ V
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLKV 149
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------LNAELTFGPLT 269
+GS A GL NLGNTCF N+++Q+L + Q YF L T G T
Sbjct: 150 NGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT 205
Query: 270 ----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
++L + F +T G + +P S F + P F+GYQQ D+HE +
Sbjct: 206 YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFM 265
Query: 318 RCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCV 367
R LLD L S ++ ++ S N N V +FGG + + V C+
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCL 325
Query: 368 ECGHSSTVYEPFLDLSLPVPTK 389
CG S ++PFLDLSL +P++
Sbjct: 326 ICGTESRKFDPFLDLSLDIPSQ 347
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEDTVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|195059388|ref|XP_001995626.1| GH17857 [Drosophila grimshawi]
gi|193896412|gb|EDV95278.1| GH17857 [Drosophila grimshawi]
Length = 1148
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 102/225 (45%), Gaps = 58/225 (25%)
Query: 229 VRGLANLGNTCFFNSVMQNLL-------AMSQLQDYFLNAEL------------------ 263
VRGL NLGNTCFFN+VMQ L + +L + EL
Sbjct: 281 VRGLINLGNTCFFNAVMQCLAQTPFLLAVLKELAEPGEEFELPGGTFSFKGKGDIELPTI 340
Query: 264 -----TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
++G LT AL E + G V P F +C+K PQF G QHD+HELLR
Sbjct: 341 RGTLSSWGNLTAALANALEELQSGGG---VYTPSKLFDKLCAKCPQFTGGDQHDAHELLR 397
Query: 319 CLLDGLCSEELAFRKR-------------NSPSE----GNGISSNQGPVFV---DYVFGG 358
LL+ + +E+L +R NS SE I NQ + + VF G
Sbjct: 398 QLLESVRAEDLKRYQRVILQNLGYKDQDINSVSEELRQKCKIYGNQAADRILRPEQVFRG 457
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAK 403
+ ST+ C +C + S+ +E FLD+SLPV +K QP R K
Sbjct: 458 FLVSTLTCQDCFNVSSRHEYFLDMSLPVAVEKP-----QPPQRRK 497
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
Query: 864 GSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKA 923
G CSV ++ +SA ++ +++ CES ++ + + V +ATK++LI+
Sbjct: 859 GECSVPSCLNN-FSAVELMTGQNKV---GCESCTRRINGTDPQAKSVNTNATKQLLISSP 914
Query: 924 PPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YRLV 976
P +L +HLKRF R KL V ++ ++++ + + N D Y L
Sbjct: 915 PAVLILHLKRFQLGPRCVFRKLTRPVTYTMLLDIAAFCGSKVKNLPNIDRKQKKLLYALY 974
Query: 977 GVVEHLGTMRGGHYVAYVRGGPK 999
GVVEH G + GGHY AYV+ PK
Sbjct: 975 GVVEHSGGLYGGHYTAYVKVRPK 997
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ SD V+EVS E L+ +AY+LFYE+I
Sbjct: 1116 GKWYYVSDSRVQEVSEEAALKAQAYLLFYERI 1147
>gi|325186982|emb|CCA21526.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 1312
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 90/195 (46%), Gaps = 40/195 (20%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------------LNAELTFG---PLTIAL 272
V GL NLGN+CF NS++Q L L YF +NAE G + IA
Sbjct: 625 VVGLQNLGNSCFLNSMLQCLTHAEPLYAYFSAQRAGQLLYELEINAENPLGMHGKIAIAF 684
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
KL ++ VI P I APQF GY Q DS E++ LLDGL E+L R
Sbjct: 685 AKLLSDMYSSNA--RVIAPIDLKYVIGQYAPQFAGYSQQDSQEVMNFLLDGL-HEDLN-R 740
Query: 333 KRNSPS----EGNG-------------ISSNQGPVFVDYVFGGQIASTVRCV--ECGHSS 373
R P EGNG V VD+ F GQ+ S V C +CGH S
Sbjct: 741 VRQKPQTEMIEGNGKNDATIAMEAWQQFKRRNDSVIVDH-FIGQLRSHVTCSNQDCGHKS 799
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LS+P+PT
Sbjct: 800 ITFDPFMSLSVPIPT 814
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 21/128 (16%)
Query: 914 ATKRVLINKAPPILTIHLKRF-----SQDARGRLSKLNGHVNF--SEIINLRPYMDPGCT 966
A K+ + P +L +HLKRF S + K+ V+F S++ +DP
Sbjct: 1118 AFKKFDLYSLPNVLIVHLKRFRYATSSLHLSHQRDKITTMVSFPVSDLDLKDCVIDPS-- 1175
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L V EH G + GGHY A K G W+ +D +V E
Sbjct: 1176 -QKGYRYELFAVSEHSGGLGGGHYTA-----------VAKAFGSGKWFRFNDSFVEETKP 1223
Query: 1027 EEVLRCEA 1034
E+ + A
Sbjct: 1224 EKAITSRA 1231
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSSLNSKLLKVNGS----TTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAETKPET--GLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S + ++ +S S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|22831079|dbj|BAC15941.1| putative ubiquitin C-terminal hydrolase [Oryza sativa Japonica
Group]
Length = 951
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 92/193 (47%), Gaps = 48/193 (24%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAELT--FGPLTIALK 273
GL NLGNTCF NS +Q L S+L DYFL N EL FG L L+
Sbjct: 263 GLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGEL---LR 319
Query: 274 KLF-AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
+L+ E KP ++P F I APQF G+ QHDS ELL LLDGL E+L
Sbjct: 320 RLWNTERKP-------VSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGL-HEDLNQV 371
Query: 333 KRNSPSEG-----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTV 375
K E N ++ N V VD + GQ ST+ C C +S
Sbjct: 372 KCKPYEEAKDASGRPDKEVADEYWSNHLARNDS-VIVD-TYHGQYKSTLTCPTCSKTSVT 429
Query: 376 YEPFLDLSLPVPT 388
++PF+ LSLPVP+
Sbjct: 430 FDPFMYLSLPVPS 442
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + A K++ + + P +L IHLKRFS R +KL V+F ++L Y+
Sbjct: 764 KKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTR-NKLETFVDFPISDLDLSSYIIDKSEL 822
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYV 994
D + YRL + H G M GGHY A +
Sbjct: 823 SDCH-YRLYAISNHYGNMGGGHYTASI 848
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 137/322 (42%), Gaps = 45/322 (13%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVI-----QWENPHLRWCFPCN 158
+K+ WVCL C CG H +H + PL + + P C C+
Sbjct: 35 NKSPWVCLTCSSVHCG-----RYVNGHAKKHYEDAQVPLTNHKKSEKQDKPQHTVCMDCS 89
Query: 159 TL-IPVEKTEENGENKDALSEVVKLIKG-RSTEISSVDVEDAWFGSGNVNSEIKSESTVV 216
+ + ++ N L V K+ + ++ E S+ + NS + S+ V
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNSKLLKV 149
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------LNAELTFGPLT 269
+GS A GL NLGNTCF N+++Q+L + Q YF L T G T
Sbjct: 150 NGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT 205
Query: 270 ----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
++L + F +T G + +P S F + P F+GYQQ D+HE +
Sbjct: 206 YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFM 265
Query: 318 RCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCV 367
R LLD L S ++ ++ S N N V +FGG + + V C+
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCL 325
Query: 368 ECGHSSTVYEPFLDLSLPVPTK 389
CG S ++PFLDLSL +P++
Sbjct: 326 ICGTESRKFDPFLDLSLDIPSQ 347
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------AAHE---GRWFHFNDSTVTLTDEDTVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|60360516|dbj|BAD90502.1| mKIAA4085 protein [Mus musculus]
Length = 512
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 182 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 241
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G I P F + A QF GYQQHDS ELL LLDGL + +K+ N
Sbjct: 242 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCN 301
Query: 342 GI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 302 GAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 360
Query: 387 PT 388
P
Sbjct: 361 PV 362
>gi|395331753|gb|EJF64133.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1301
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 86/189 (45%), Gaps = 30/189 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTI------ALKKLFAET 279
GL N+GNTCF NS +Q L+ +L DYFL EL PL + A +
Sbjct: 408 GLGNMGNTCFMNSALQCLVHTPELVDYFLTGVYQEELNPDNPLGMHSAIAQAFGAMLTRI 467
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR---NS 336
+ PR F + APQF GYQQHDS EL+ LLDGL + K+
Sbjct: 468 WDNESTLSSYTPREFKQTLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEK 527
Query: 337 PS-EG--------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
P EG G V VD +F GQ ST+ C EC S ++PF+
Sbjct: 528 PDWEGGGDKELVELANLSWEGYMKRNDSVVVD-LFQGQYQSTLVCPECNKVSITFDPFMY 586
Query: 382 LSLPVPTKK 390
L+LP+P +K
Sbjct: 587 LTLPLPVQK 595
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 66/152 (43%), Gaps = 31/152 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + ATKR + K P IL +HLKRFS ++R K++ V+F E ++L +
Sbjct: 964 KKHQQATKRFDLWKVPDILVVHLKRFS-NSRMLRDKIDTFVDFPLEGLDLTSMVGERSVG 1022
Query: 968 ---------------HDNYD---YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESV 1009
HD + Y L V EHLG + GGHY AY
Sbjct: 1023 KRLQETGVDVESLGLHDLEEPLVYDLFAVDEHLGGLGGGHYRAYALN-----------HA 1071
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
G WYH D YV E+ + AY+LFY +
Sbjct: 1072 TGKWYHFDDSYVTPARPEQAVNSNAYLLFYRR 1103
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS A GL NLGNTCF N+++Q+L + Q YF
Sbjct: 91 NSSLNSKLLKVNGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 146
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 147 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 206
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 207 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSALSASNKCCINGASTVVTAIF 266
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 267 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 299
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 352 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAA 410
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 411 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEDTVVKAKAYI 457
Query: 1037 LFY 1039
LFY
Sbjct: 458 LFY 460
>gi|4539435|emb|CAB40023.1| putative protein [Arabidopsis thaliana]
gi|7267754|emb|CAB78180.1| putative protein [Arabidopsis thaliana]
Length = 928
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 94/204 (46%), Gaps = 52/204 (25%)
Query: 229 VRGLANLGNTCFFNSVMQNL-----LAMSQLQDYFLNAELTF------------------ 265
+ GL+NLGNTCF NS +Q L + LQDY L+ + +
Sbjct: 294 LAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYMLDTYMFYFLVMVLTCILNIILTLNF 353
Query: 266 -GPLTIA----LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
G L IA LKKL++ RN + PR+F + APQF GY QHDS ELL L
Sbjct: 354 QGELAIAFGDLLKKLWSSG------RNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFL 407
Query: 321 LDGLCSEELAFRKRNSPSE----------------GNGISSNQGPVFVDYVFGGQIASTV 364
LDGL E+L KR E N + V VD V GQ ST+
Sbjct: 408 LDGL-HEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVD-VCQGQYKSTL 465
Query: 365 RCVECGHSSTVYEPFLDLSLPVPT 388
C CG S ++PF+ LS+P+P+
Sbjct: 466 VCPVCGKISITFDPFMYLSVPLPS 489
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ +
Sbjct: 780 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYLKNKIDTFVNFPVHDLDLSKYVKN--KN 836
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L V H G + GGHY AY + NK WYH D +V V+
Sbjct: 837 GQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNK-----------WYHFDDSHVSSVNES 885
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY ++
Sbjct: 886 EIRNSAAYVLFYRRV 900
>gi|339248093|ref|XP_003375680.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
gi|316970940|gb|EFV54793.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
Length = 725
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 126/313 (40%), Gaps = 68/313 (21%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR-HPLVIQWENPHLRWCFPCNTLIPVEK 165
+CLGCG+ C H +RH ++ H L + + CF C + +
Sbjct: 92 FLLCLGCGYQFCTDRSF-----HHALRHFQKAESHCLTLSLTTLEI-LCFRCGKFVDTGQ 145
Query: 166 TEENGENKDALSEVVKLI-KGRSTEISSVDVE---DAWFGSGNVNSEI---KSESTVVSG 218
+ + L EV L+ K + E SS + + F N I K + SG
Sbjct: 146 SSQ-------LIEVRSLVEKCKKAECSSENSSPHLEKHFAVEERNYNITFSKRKMAKNSG 198
Query: 219 SDLDGNACYVVRGLANLGNTCFFNSVMQNLL-----------AMSQLQDYFLNAELTFGP 267
L V GL N GNTC+FN+V+Q L+ MS L+ E +
Sbjct: 199 ISLP------VSGLINFGNTCYFNAVLQVLMRTKSFCLLLAKCMSDENSQLLDPESVWQY 252
Query: 268 LTIALKKLFAETKPETGLR--NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
L A F+ GL ++I A QF+G QQHDSHELLR LD L
Sbjct: 253 LNAA----FSSCPSVYGLEKPHII------------AIQFRGNQQHDSHELLRYFLDELR 296
Query: 326 SEELAFRKRNSPSEGNGISSNQGP------------VFVDYVFGGQIASTVRCVECGHSS 373
EEL K +G VD VFGGQ+ ++RC+ C H S
Sbjct: 297 DEELVCMKDGIKQCCELTEDEEGKEKLKAYMLCCKTTAVDQVFGGQLLQSIRCLTCNHRS 356
Query: 374 TVYEPFLDLSLPV 386
+PFLDLSL +
Sbjct: 357 YKLDPFLDLSLAL 369
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 65/228 (28%)
Query: 867 SVDGATSSGYSAEKVYQSDSQLVAGNC-----ESEESKVEEINSKIVKVKRDATKRVLIN 921
SVD A + + E++ S+ NC + +E+K+ DA K LI
Sbjct: 510 SVD-ACLNNFMIEELLTGSSKFACDNCAEISGDKDETKLS-----------DAKKSSLIF 557
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINL-RPYMDPGCTDHDN-YDYRLVGVV 979
P +LT+HLKRF + + K+ GHV FS +++ R G D+ Y L GV+
Sbjct: 558 SPPAVLTLHLKRFENNGKTN-RKIYGHVVFSTELDMSRFCCRKGRRIFDSRVLYSLYGVI 616
Query: 980 EHLGTMRGGHYVAYVR----------------------------GGPKNKVKAKKESVGG 1011
H G+M GGHY+AYV+ G + K + +K G
Sbjct: 617 CHSGSMYGGHYIAYVKVEDRDDASWKRFLEKVSQVETIIFDPDDVGWQTKQRRRKTPSGS 676
Query: 1012 -----------------VWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
WY +D +V VL+ EAY+LFYE+I
Sbjct: 677 ANHKRSVSDGRRLSRAPTWYMLNDNITSKVPESAVLKAEAYMLFYERI 724
>gi|194763305|ref|XP_001963773.1| GF21081 [Drosophila ananassae]
gi|190618698|gb|EDV34222.1| GF21081 [Drosophila ananassae]
Length = 1169
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 107/222 (48%), Gaps = 54/222 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLL-------AMSQL----QDYFL-----------NAEL--- 263
VRGL NLGNTCFFN+VMQ L M +L +++ L + EL
Sbjct: 339 VRGLTNLGNTCFFNAVMQCLAQTPFLLSVMRELAEPGEEFVLPGGTFNFKDKGDVELPMI 398
Query: 264 -----TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
++G LT AL E + +V P F +C+K PQF G QHD+HELLR
Sbjct: 399 KGTLSSWGGLTAALANALEELQAGG---SVFTPSKLFDKLCAKCPQFTGGDQHDAHELLR 455
Query: 319 CLLDGLCSEELAFRKR----NSPSEGNGISS-------------NQGPVFV---DYVFGG 358
LL+ + +E+L +R N + ISS NQ + D VF G
Sbjct: 456 QLLESVRNEDLKRYQRVILQNLGYKDQEISSVSEEMRQKCKIYGNQAGERILRPDQVFRG 515
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA-PSKKTQPA 399
+ ST+ C +C S+ +E FLD+SLPV +K P ++ +P+
Sbjct: 516 FLVSTLTCQDCHSVSSRHEYFLDMSLPVAVEKPQPPQRRKPS 557
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 862 DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLIN 921
++G CSV ++ ++A ++ +++ C+S ++ + K V +ATK++L++
Sbjct: 902 EDGECSVQSCLNN-FTAVELMTGQNKV---GCDSCTLRINGNDPKAKSVNTNATKQLLVS 957
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YR 974
P +L +HLKRF R KL V++ ++++ + + N D Y
Sbjct: 958 SPPAVLILHLKRFQLGPRCIFRKLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKLLYA 1017
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPK 999
L GVVEH G M GGHY AYV+ PK
Sbjct: 1018 LYGVVEHSGGMYGGHYTAYVKVRPK 1042
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 998 PKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
P + A ++ G WY+ SD V+EVS + L+ +AY+LFYE+I
Sbjct: 1124 PPGEEAAHVQAPPGKWYYVSDSRVQEVSEDSALKAQAYLLFYERI 1168
>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
Length = 450
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 109/233 (46%), Gaps = 32/233 (13%)
Query: 185 GRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYV--VRGLANLGNTCFFN 242
GR S++ + + S + T S + N Y+ + GL NLGNTCF N
Sbjct: 65 GRKNSPSNLPMSPLSPSQAGIGSALPPSGTRCSSQPCERNDGYLQGLTGLRNLGNTCFMN 124
Query: 243 SVMQNLLAMSQLQDYFL----------NAELTFGPLT--IALKKLFAETKPETGLRNVIN 290
S++Q L +L+DY L N+ + ++ L +L + P ++
Sbjct: 125 SILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWTSSPNEN----VS 180
Query: 291 PRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEGNGISSNQG 348
P F I AP+F GY Q D+ E LR LLDGL SE + R R S + + ++
Sbjct: 181 PSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRASTDTLDHLPDDEK 240
Query: 349 P--VFVDY----------VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
++ Y +F GQ+ S++ C ECG+ ST ++PF DLSLP+P K
Sbjct: 241 SRQMWRRYQEREDSRISDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPKK 293
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + TK+ I K P IL +HLKRFS+ AR R SKL VNF + ++LR + C
Sbjct: 325 KARTRCTKKFSIQKFPKILVLHLKRFSE-ARIRTSKLTTFVNFQLKDLDLREFASQSC-- 381
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L V H GT GGHY AY K V W+ +D V +S
Sbjct: 382 -NHAVYNLYAVSNHSGTTMGGHYTAYC-----------KNPVSSEWHSFNDSRVTPMSSS 429
Query: 1028 EVLRCEAYILFYE 1040
V +AY+LFYE
Sbjct: 430 HVRSSDAYLLFYE 442
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS A GL NLGNTCF N+++Q+L + Q YF
Sbjct: 117 NSTLNSKLLKVNGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 172
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 173 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 232
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 233 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSTILQENSALSASNKCCINGASTVVTAIF 292
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 293 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 325
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + D+ Y L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPDSCLYDLAA 436
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 437 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 483
Query: 1037 LFY 1039
LFY
Sbjct: 484 LFY 486
>gi|242034643|ref|XP_002464716.1| hypothetical protein SORBIDRAFT_01g025350 [Sorghum bicolor]
gi|241918570|gb|EER91714.1| hypothetical protein SORBIDRAFT_01g025350 [Sorghum bicolor]
Length = 935
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFG---PLTIALKKLFAE 278
+ GL NLGNTCF NS +Q+L+ L YFL N E G L IA +L
Sbjct: 311 LSGLHNLGNTCFMNSAIQSLVHTPPLVQYFLEDYTCEINTENPLGLQGELAIAFGELL-- 368
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS 338
K + R + PR+F + APQF GY QHDS ELL LLDGL E+L K+
Sbjct: 369 RKLWSSGRTSVAPRAFKSKLSRFAPQFSGYNQHDSQELLAFLLDGL-HEDLNRVKKKPYI 427
Query: 339 EG----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
E N + + VD F GQ ST+ C C S ++PF+ L
Sbjct: 428 EAKDADGRPDDEFAEECWNYHKARNDSIIVDR-FQGQYKSTLVCPVCNKISVTFDPFMYL 486
Query: 383 SLPVPT 388
SLP+P+
Sbjct: 487 SLPLPS 492
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A+K++ + + P IL +HLKRFS +R +KL+ VNF +N+ Y+
Sbjct: 791 KEHRQASKKLDLWRLPEILVVHLKRFSY-SRYMKNKLDTFVNFPIHDLNMSKYVKLTSRG 849
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y L V+ H G + GGHY AY + +N WYH D +V V+ +
Sbjct: 850 DQHPMYELYAVINHYGGLGGGHYSAYAKLVEENN-----------WYHFDDSHVSSVNED 898
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY ++
Sbjct: 899 EIRTSAAYVLFYRRV 913
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 148/378 (39%), Gaps = 71/378 (18%)
Query: 50 CPHLDKG--IDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAI 107
CPHL I D GS C CR +K+
Sbjct: 3 CPHLSASVCIAPDSAKFPHGSPSSWCCSVCR------------------------SNKSP 38
Query: 108 WVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVI-----QWENPHLRWCFPCNTL-I 161
WVCL C CG H +H + PL + + P C C++
Sbjct: 39 WVCLTCSSVHCG-----RYVNGHAKKHYEDAQIPLTNFKKSEKQDKPQHTVCMDCSSYST 93
Query: 162 PVEKTEENGENKDALSEVVKLIKG-RSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSD 220
+ ++ N L V K+ + ++ E S+ + + NS + S+ V+GS
Sbjct: 94 YCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKFSENSSLNSKLLKVNGS- 152
Query: 221 LDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------LNAELTFGPLT---- 269
GL NLGNTCF N+++Q+L + Q YF L T G T
Sbjct: 153 ---TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR 209
Query: 270 ------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
++L + F +T G + +P S F + P F+GYQQ D+HE +R LL
Sbjct: 210 SQGDSSVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLL 269
Query: 322 DGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGH 371
D L S ++ +S + N N V VFGG + + V C+ CG
Sbjct: 270 DHLHLELQGGFNGVSGTAILQENSSLAASNKCCINGASTVVTAVFGGVLQNEVNCLICGT 329
Query: 372 SSTVYEPFLDLSLPVPTK 389
S ++PFLDLSL +P++
Sbjct: 330 ESRKFDPFLDLSLDIPSQ 347
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V + +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------AVHE---GRWFHFNDSTVTLTDEDTVGKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|403414027|emb|CCM00727.1| predicted protein [Fibroporia radiculosa]
Length = 1048
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 81/182 (44%), Gaps = 49/182 (26%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDAR-------GRLSKLNGHVNFSEIINLRPYMD 962
V R KR LI+ PP+L +HLKRF Q ++ G + KL+ + F E+++L P++
Sbjct: 867 VLRRMYKRYLISDPPPVLVVHLKRFQQTSKMYSVSFSGGVKKLDEFIAFPELLDLTPFLA 926
Query: 963 PGCTDH-------DNYD---------YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKK 1006
P D N+ YRL VV H+G M GGHYVAY P + V
Sbjct: 927 PRKEDFGLDKARKSNFKASSAPSRCMYRLYAVVVHIGNMLGGHYVAYTALPPSHPVSKPS 986
Query: 1007 ESVGGV--------------------------WYHASDVYVREVSLEEVLRCEAYILFYE 1040
S + W + SD VR ++EEVL+ +AYI YE
Sbjct: 987 ASNSSIASEPIVSPNALPQTSIPEQALKPARQWAYISDTVVRLTTIEEVLKAKAYICMYE 1046
Query: 1041 KI 1042
+I
Sbjct: 1047 RI 1048
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 86/216 (39%), Gaps = 65/216 (30%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKK-----LFAETKP---- 281
GL N GNTCF NS +Q L+A L + + F + +LK + A+ P
Sbjct: 33 GLINHGNTCFMNSTLQGLMATELLHNL-----VNFRSVPASLKSTLGTSIVAQRSPQLTN 87
Query: 282 ---------------------------------ETGLRNVINPRSFFGCICSKAPQFKGY 308
E+ R ++P+ + K Q+ +
Sbjct: 88 GHGLGGQYEHAKVEDMPLGDTFIDVMRKGWDIQESQRRESMSPKELLFTMGKKYDQYMDF 147
Query: 309 QQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQG---------PV--------- 350
+Q D+HE LR +LD + EE+ K+ P S +G P+
Sbjct: 148 RQQDAHEFLRHMLDAMRMEEMDIIKKRQPPPPVEESRKRGRKKRMLPPAPISGDDEKLAS 207
Query: 351 FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
FVD +FGG++AS + C +C S YE F DLSL +
Sbjct: 208 FVDMLFGGRLASILVCEKCQKVSLTYEDFNDLSLSI 243
>gi|307184834|gb|EFN71134.1| Ubiquitin carboxyl-terminal hydrolase 16 [Camponotus floridanus]
Length = 889
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 81/134 (60%), Gaps = 9/134 (6%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINK 922
EG CSV+ + ++A ++ +++V C + E K +E +SK+V +TK+ LI++
Sbjct: 702 EGECSVESCLNQ-FTALELMTGSNKVVCEACTAREKKSQESSSKMVCT--SSTKQYLISQ 758
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-YRLVGVVEH 981
PP+L +HLKRF Q R K+ HV+F ++NL P CTD+ Y L GVVEH
Sbjct: 759 VPPVLILHLKRF-QTQRVGFRKVLKHVSFPMLLNLAPV----CTDYKKRRLYALYGVVEH 813
Query: 982 LGTMRGGHYVAYVR 995
GT+ GGHYVAYV+
Sbjct: 814 SGTVHGGHYVAYVK 827
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 144/351 (41%), Gaps = 74/351 (21%)
Query: 96 KKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLR 152
KK + SK +W+CL CG C + H + H ++ H +VI + ++
Sbjct: 68 KKTEEIYFSKPLWICLQCGDQNCDK-------EKHAIEHYKKPHSDCHCIVIDIHHWNV- 119
Query: 153 WCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE 212
WCF C + E + + L E ++ IK +T + +EI ++
Sbjct: 120 WCFQC-------EIEIHPNSSKKLLETIEFIKKCAT--MQIPQPKTPVTQCQNQTEIITD 170
Query: 213 STVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNL----LAMSQLQDYFL--------- 259
+ N V GLANLGNTCFFN+V+Q L M L D L
Sbjct: 171 VQEKEKHKILNNLPK-VGGLANLGNTCFFNAVLQCLSQTPYLMKVLDDLRLPGQKFILPG 229
Query: 260 --------NAELTFGPLTIALKK------LFAETKPETGLRNVINPRSFFGCIC---SKA 302
E+ F P+ L++ + ET + N + +C K
Sbjct: 230 GKHKPLDAEEEVEFPPIEGTLERWGSFTSVLCETLSKMQNTNGYQTYTPLNLLCKLRKKT 289
Query: 303 PQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFV---------- 352
Q QHDSHELLR LL+ + +E+L R ++ + G+S P V
Sbjct: 290 TQCVDGGQHDSHELLRHLLEIVRNEDLR-RYQSIILKEVGLSEKTKPDGVEKSLKSRVKF 348
Query: 353 ------------DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA 391
+ VF G + ST++C++C HSS EPFLDLSLPV K+
Sbjct: 349 YGNQASTRLLGPETVFRGVLVSTLQCLDCHHSSQRTEPFLDLSLPVTADKS 399
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 148/393 (37%), Gaps = 101/393 (25%)
Query: 50 CPHLDKG--IDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAI 107
CPHL I D GS P C CR +K+
Sbjct: 3 CPHLSSSVCIAPDSAKFPNGSPSPWCCSVCR------------------------SNKSP 38
Query: 108 WVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPL---------------VIQWENPHLR 152
WVCL C CG H +H + PL V + +
Sbjct: 39 WVCLTCSSVHCGRY-----VNGHAKKHYEDAQIPLTNHKKSERQEKAQHTVCMDCSSYST 93
Query: 153 WCFPCNTLIP-------VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNV 205
+C+ C+ + V+K E+ +N + + + R +E
Sbjct: 94 YCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKL------LE--------- 138
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSSLNSKLLKVNGS----TTAVCATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + +N Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEDTVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|47169480|tpe|CAE48377.1| TPA: ubiquitin specific protease 11 [Rattus norvegicus]
Length = 700
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 89/183 (48%), Gaps = 26/183 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLA-MSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPE 282
GL NLGNTCF NS +Q L+ + QL +YFLN EL F PL + L + +A+ +
Sbjct: 36 GLTNLGNTCFMNSALQQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQ 95
Query: 283 T--GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
T G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 96 TWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELC 155
Query: 341 NGI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
NG V VD F G ST+ C +CG+ S ++PF LS+P
Sbjct: 156 NGAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVP 214
Query: 386 VPT 388
+P
Sbjct: 215 LPV 217
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P +L IHLKRFS + +R +L L ++FSE + ++P + +
Sbjct: 549 ATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTLVQFPIRDLDFSEFV-IKPKNE---SA 604
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D Y Y L+ V H G MR GH + K+S G W++ D V V+
Sbjct: 605 PDLYKYDLIAVSNHYGGMRDGHCTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 653
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 654 QIESKAAYVLFYQR 667
>gi|120538581|gb|AAI29076.1| Usp3 protein [Rattus norvegicus]
Length = 423
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS A GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSSLNSKLLKVNGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAETKPET--GLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSANNKCCINGASTVVTTIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
>gi|392589983|gb|EIW79313.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 1272
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----NAEL-------TFGPLTIALKKLFAET 279
GL N+GNTCF NS +Q L +L DYFL + EL G + A L +
Sbjct: 405 GLGNMGNTCFMNSALQCLAHNKELMDYFLFGVYHQELNPDNPLGMQGAIAEAFGALVDKI 464
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---- 335
+ +PR F + APQF GYQQHDS EL+ LLDGL + K+
Sbjct: 465 WATNSTMSSYSPREFKMALQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEK 524
Query: 336 --------------SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
+ +G V VD +F GQ ST+ C EC S ++PF+
Sbjct: 525 PDWDGGGDVELVQLAQKSWDGYKLRNDSVIVD-LFQGQYQSTLVCPECQKISITFDPFMY 583
Query: 382 LSLPVPTKK 390
L+LP+P K
Sbjct: 584 LTLPLPITK 592
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 37/189 (19%)
Query: 878 AEKVYQSDSQLVAGNCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHL 931
A K + G+C +E +K E++ + K + ATK+ + AP IL +HL
Sbjct: 920 ASKAAAEKKNITLGDCLAEFTKEEQLGEDDLWYCPKCKKHQQATKKFTLWNAPDILVVHL 979
Query: 932 KRFSQDARGRLSKLNGHVNFS-EIINL----------RPYMDPGC--------TDHDNYD 972
KRFS ++R K++ V+F E ++L R + G D D
Sbjct: 980 KRFS-NSRAMRDKIDALVDFPIEALDLTDMVGERKATRRLAESGVDVQTLGLENDDDPLL 1038
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L V EHLG + GGHY AY +K WYH D YV E + E+ +
Sbjct: 1039 YDLFAVDEHLGGLGGGHYRAYAHHYGTDK-----------WYHFDDSYVTESTAEQSVNA 1087
Query: 1033 EAYILFYEK 1041
AY+LFY++
Sbjct: 1088 NAYLLFYQR 1096
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 140/337 (41%), Gaps = 75/337 (22%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLV----------IQWE-----N 148
+K+ WVCL C CG H +H + PL IQ +
Sbjct: 35 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQIPLTNHKKSEKQEKIQHTVCMDCS 89
Query: 149 PHLRWCFPCNTLIP-------VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFG 201
+ +C+ C+ + V+K E+ +N + + + R +E
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAYTADRHRKRKL------LE----- 138
Query: 202 SGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN- 260
NS + S+ V+GS A GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 ----NSSLNSKLLKVNGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKEL 190
Query: 261 --AEL---------TF-----GPLTIALKKLFAET--KPETGLRNVINPRSFFGCICSKA 302
EL T+ G +++L + F +T G + +P S F I
Sbjct: 191 PAVELRNGKTAGRRTYHTRSQGDTSVSLVEEFRKTLCALWQGSQTAFSPESLFYVIWKIM 250
Query: 303 PQFKGYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFV 352
P F+GYQQ D+HE +R LLD L S ++ ++ S + N V
Sbjct: 251 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAVLQENSTLSASSKCCVNGASTVV 310
Query: 353 DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P +D +N Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSDPENCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVGKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|198471754|ref|XP_001355713.2| GA18000 [Drosophila pseudoobscura pseudoobscura]
gi|198146063|gb|EAL32772.2| GA18000 [Drosophila pseudoobscura pseudoobscura]
Length = 1135
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 103/227 (45%), Gaps = 60/227 (26%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQL-----------QDYFL-----------NAEL--- 263
VRGL NLGNTCFFN+VMQ L L +++ L + EL
Sbjct: 289 VRGLTNLGNTCFFNAVMQCLAQTPFLLSVLRELSEPGEEFVLPGGKFDFKDKGSTELPII 348
Query: 264 -----TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
++G LT AL E + G V PR F +C+K PQF G QHD+HELLR
Sbjct: 349 RGTLSSWGSLTSALANALEELQVGGG---VFTPRKLFDKLCAKCPQFTGGDQHDAHELLR 405
Query: 319 CLLDGLCSEELAFRKR--------------NSPSEGN------GISSNQGPVFVDYVFGG 358
LL+ + +E+L +R N E G + + + VF G
Sbjct: 406 QLLESVRNEDLKRYQRVILQNLGYKDQDSQNVSEEMRRKCKIYGKQAGDRILRPEQVFRG 465
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPV-------PTKKAPSKKTQP 398
+ ST+ C +C S+ +E FLD+SLPV P ++ PS ++ P
Sbjct: 466 FLVSTLTCQDCHSVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPESSP 512
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 862 DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLIN 921
++G CSV +S ++A ++ +++ C+S ++ + K V +ATK++L++
Sbjct: 871 EDGECSVQSCLNS-FTAVELMTGQNKV---GCDSCTQRLNGNDPKAKSVNTNATKQLLVS 926
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YR 974
P +L +HLKRF R KL V++ ++++ + + N D Y
Sbjct: 927 SPPAVLILHLKRFQLGPRCIFRKLTRPVSYPNMLDIAAFCGSKVKNLPNIDRKQKKLLYA 986
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPK 999
L GVVEH G M GGHY AYV+ PK
Sbjct: 987 LYGVVEHSGGMYGGHYTAYVKVRPK 1011
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 997 GPKNKVKAKKESVG-----GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
GP K K + E+ G WY+ SD V+EVS + L+ +AY+LFYE+I
Sbjct: 1084 GPGQKDKQEDEAANVQAPPGKWYYVSDSRVQEVSEDTALKAQAYLLFYERI 1134
>gi|148668417|gb|EDL00741.1| ubiquitin specific peptidase 11, isoform CRA_b [Mus musculus]
Length = 434
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 104 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 163
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G I P F + A QF GYQQHDS ELL LLDGL + +K+ N
Sbjct: 164 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCN 223
Query: 342 GI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 224 GAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 282
Query: 387 PT 388
P
Sbjct: 283 PV 284
>gi|356576624|ref|XP_003556430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
[Glycine max]
Length = 933
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 94/195 (48%), Gaps = 48/195 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN-----------------AELTFGPLTIA 271
+ GL NLGNTCF NS +Q L+ L +YFL L FG L
Sbjct: 320 LAGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMCGELALAFGDL--- 376
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+KL++ R I PR+F + APQF GY QHDS ELL LLDGL E+L
Sbjct: 377 LRKLWSSG------RTAIAPRAFKSKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN- 428
Query: 332 RKRNSP------SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R + P S+G N ++ N + VD V GQ ST+ C CG S
Sbjct: 429 RVKQKPYIEMKDSDGRPDEEVASECWKNHMARNDS-LIVD-VCQGQYKSTLVCPVCGKIS 486
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 487 ITFDPFMYLSLPLPS 501
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K R ATK++ + K P IL HLKRFS +R +KL+ VNF I NL D
Sbjct: 797 KEHRQATKKLDLWKLPEILVFHLKRFSY-SRYLKNKLDTFVNFP-IHNLDLTKYVKSKDG 854
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
+Y Y L + H G + GGHY AY + +NK W+H D +V V+ E
Sbjct: 855 PSYVYDLYAISNHYGGLGGGHYTAYCKLIDENK-----------WFHFDDSHVSSVTEAE 903
Query: 1029 VLRCEAYILFYEK 1041
+ AY+LFY++
Sbjct: 904 IKSSAAYVLFYQR 916
>gi|356535264|ref|XP_003536168.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
[Glycine max]
Length = 926
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 94/195 (48%), Gaps = 48/195 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN-----------------AELTFGPLTIA 271
+ GL NLGNTCF NS +Q L+ L +YFL L FG L
Sbjct: 318 LAGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMRGELALAFGDL--- 374
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+KL++ R I PR+F + APQF GY QHDS ELL LLDGL E+L
Sbjct: 375 LRKLWSSG------RTAIAPRAFKSKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN- 426
Query: 332 RKRNSP------SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R + P S+G N ++ N + VD V GQ ST+ C CG S
Sbjct: 427 RVKQKPYIEMKDSDGRPDEEVASECWKNHMARNDS-LIVD-VCQGQYKSTLVCPVCGKIS 484
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 485 ITFDPFMYLSLPLPS 499
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K R ATK++ + K P IL HLKRFS +R +KL+ VNF I NL D
Sbjct: 790 KEHRQATKKLDLWKLPEILVFHLKRFSY-SRYLKNKLDTFVNFP-IHNLDLTKYVKSKDG 847
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
++Y Y L + H G + GGHY AY + NK W H D +V V+ E
Sbjct: 848 ESYVYNLYAISNHYGGLGGGHYTAYCKLIDDNK-----------WCHFDDSHVSPVTEAE 896
Query: 1029 VLRCEAYILFYEK 1041
+ AY+LFY++
Sbjct: 897 IKSSAAYVLFYQR 909
>gi|356535266|ref|XP_003536169.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
[Glycine max]
Length = 931
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 94/195 (48%), Gaps = 48/195 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN-----------------AELTFGPLTIA 271
+ GL NLGNTCF NS +Q L+ L +YFL L FG L
Sbjct: 318 LAGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMRGELALAFGDL--- 374
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+KL++ R I PR+F + APQF GY QHDS ELL LLDGL E+L
Sbjct: 375 LRKLWSSG------RTAIAPRAFKSKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN- 426
Query: 332 RKRNSP------SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R + P S+G N ++ N + VD V GQ ST+ C CG S
Sbjct: 427 RVKQKPYIEMKDSDGRPDEEVASECWKNHMARNDS-LIVD-VCQGQYKSTLVCPVCGKIS 484
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 485 ITFDPFMYLSLPLPS 499
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K R ATK++ + K P IL HLKRFS +R +KL+ VNF I NL D
Sbjct: 795 KEHRQATKKLDLWKLPEILVFHLKRFSY-SRYLKNKLDTFVNFP-IHNLDLTKYVKSKDG 852
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
++Y Y L + H G + GGHY AY + NK W H D +V V+ E
Sbjct: 853 ESYVYNLYAISNHYGGLGGGHYTAYCKLIDDNK-----------WCHFDDSHVSPVTEAE 901
Query: 1029 VLRCEAYILFYEK 1041
+ AY+LFY++
Sbjct: 902 IKSSAAYVLFYQR 914
>gi|330822614|ref|XP_003291744.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
gi|325078064|gb|EGC31737.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
Length = 984
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 214 TVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-------- 265
T + S DG+ + GL NLGNTCF NS +Q L L YF +
Sbjct: 270 TYSTNSRGDGDKRPGITGLGNLGNTCFMNSALQCLSNTYPLTKYFFTNKYEKDINKDNPL 329
Query: 266 ---GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLD 322
G L L ++ G R + PR+F I APQF GY QHDS ELL LLD
Sbjct: 330 GCGGELATEYASLISDIW--EGNRTSVYPRNFKSQIERFAPQFAGYHQHDSQELLAFLLD 387
Query: 323 GLCSEELAFRKR---------NSPSE-------GNGISSNQGPVFVDYVFGGQIASTVRC 366
GL + +K+ P E G ++ N V VD+ F Q+ S + C
Sbjct: 388 GLHEDLNKVKKKPFFEGKDYDERPDEVIANEQWGMHVARNDS-VIVDW-FQAQLKSKLVC 445
Query: 367 VECGHSSTVYEPFLDLSLPVPTK 389
+CG S ++PF+ LSLP+P++
Sbjct: 446 PDCGKISITFDPFMYLSLPLPSE 468
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + A K+ I APPIL +HLKRFS R KL+ V F + ++L Y+
Sbjct: 787 KKHQRAFKKFDIWSAPPILVVHLKRFSYKKHYR-DKLDTLVKFPIKDLDLSKYVLSKNQP 845
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK-VKAKKESVG-GVWYHASDVYVREVS 1025
YD L V H G++ GGHY AY P+ K KA S G G WY D +V E +
Sbjct: 846 PPIYD--LFAVSNHYGSLGGGHYTAYALNEPETKEAKANGNSNGNGKWYKFDDSHVSEAN 903
Query: 1026 LEEVLRCEAYILFYEK 1041
+E V AY+LFY +
Sbjct: 904 VENVESEAAYVLFYRR 919
>gi|26339726|dbj|BAC33526.1| unnamed protein product [Mus musculus]
Length = 366
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 36 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 95
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G I P F + A QF GYQQHDS ELL LLDGL + +K+ N
Sbjct: 96 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCN 155
Query: 342 GI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 156 GAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 214
Query: 387 PT 388
P
Sbjct: 215 PV 216
>gi|268536766|ref|XP_002633518.1| Hypothetical protein CBG05381 [Caenorhabditis briggsae]
Length = 899
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 96/195 (49%), Gaps = 34/195 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----------FGPLTIALKKLFAET 279
GL+NLGNTCF S +Q L + L+DYFLN + T G L +A+ +L
Sbjct: 275 GLSNLGNTCFMASALQCLSNVPPLRDYFLNNKYTEDINDENPLGTRGNLALAVGELMKGM 334
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G + INPR F G I AP+F GY Q D+HEL+ +LDGL E+L R + P
Sbjct: 335 W--SGEYSSINPRKFKGIIGQFAPRFNGYTQQDAHELMAYMLDGL-HEDLN-RVKQKPYI 390
Query: 340 GNGISSNQGP------------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
+ + P + VD + GQ+ ST+ C C S ++PF
Sbjct: 391 QDNDEDQKLPEAEYAAKSWHSYKLRNDSIIVD-LMHGQLRSTLVCPVCDTVSIKFDPFGY 449
Query: 382 LSLPVPTKKAPSKKT 396
+SLP+P K+ ++T
Sbjct: 450 ISLPLPAKEQIVRQT 464
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLR------PYMDPGCTD 967
ATK++ + K P IL +HLKRF R KL V +I +R ++P +
Sbjct: 728 ATKQLDMWKLPEILVLHLKRFQYTKWSR-EKLTWEV----VIPVRGLDLTNKIVNP---N 779
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
H+ Y L+ V H G+M GGHY A K +S Y +D Y
Sbjct: 780 HEKAIYDLIAVSRHYGSMSGGHYTAAAFNDHAQKWYDFNDSSASATYPPTDPYE------ 833
Query: 1028 EVLRCEAYILFYEK 1041
+ YIL Y +
Sbjct: 834 ---SSDPYILVYRR 844
>gi|356576622|ref|XP_003556429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
[Glycine max]
Length = 928
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 94/195 (48%), Gaps = 48/195 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN-----------------AELTFGPLTIA 271
+ GL NLGNTCF NS +Q L+ L +YFL L FG L
Sbjct: 320 LAGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDYSDEINMDNPLGMCGELALAFGDL--- 376
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+KL++ R I PR+F + APQF GY QHDS ELL LLDGL E+L
Sbjct: 377 LRKLWSSG------RTAIAPRAFKSKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN- 428
Query: 332 RKRNSP------SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R + P S+G N ++ N + VD V GQ ST+ C CG S
Sbjct: 429 RVKQKPYIEMKDSDGRPDEEVASECWKNHMARNDS-LIVD-VCQGQYKSTLVCPVCGKIS 486
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 487 ITFDPFMYLSLPLPS 501
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K R ATK++ + K P IL HLKRFS +R +KL+ VNF I NL D
Sbjct: 792 KEHRQATKKLDLWKLPEILVFHLKRFSY-SRYLKNKLDTFVNFP-IHNLDLTKYVKSKDG 849
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
+Y Y L + H G + GGHY AY + +NK W+H D +V V+ E
Sbjct: 850 PSYVYDLYAISNHYGGLGGGHYTAYCKLIDENK-----------WFHFDDSHVSSVTEAE 898
Query: 1029 VLRCEAYILFYEK 1041
+ AY+LFY++
Sbjct: 899 IKSSAAYVLFYQR 911
>gi|336381480|gb|EGO22632.1| hypothetical protein SERLADRAFT_372069 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1030
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 96/217 (44%), Gaps = 38/217 (17%)
Query: 209 IKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF---------- 258
I+SE V SD+ V GL NLGNTC+ NS +Q L A +F
Sbjct: 651 IQSEYPVTYWSDVQ----IVTSGLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNAVN 706
Query: 259 -LNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
LN T G L +A + E + L + + P +F ICS APQF G +QHDS E L
Sbjct: 707 MLNPLGTKGNLALAFSNILYEMA-HSELPH-LTPNAFRRSICSHAPQFSGSEQHDSQEFL 764
Query: 318 RCLLDGLCSE--------------------ELAFRKRNSPSEGNGISSNQGPVFVDYVFG 357
LLDGL + E ++ S E N + VDY F
Sbjct: 765 SFLLDGLHEDLNRVLQKPHYEVTPEREAELEKLPQQIASQQEWNLYRMRNDSLVVDY-FQ 823
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK 394
GQ + + C+ C +ST Y F+ L+LP+P + SK
Sbjct: 824 GQFRNRMECLTCHKTSTTYNTFMYLTLPIPIVRGSSK 860
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 41/158 (25%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLS-KLNGHVNFS----EIIN-----LR 958
K R ATKR+ +++ PPIL IHLKRFS +G + K+ V+F ++ N L
Sbjct: 888 KALRKATKRLSLSRLPPILLIHLKRFS--FKGPFTDKIETVVDFPLRTLDLTNYMPPPLP 945
Query: 959 PYMDPGCTDHDN------------YDYRLVGVVEHLGTMRGGHYVAYV--RGGPKNKVKA 1004
P MD G + N Y Y L GV H GT+ GGHY A++ RGG
Sbjct: 946 PGMDKGNMNGANLSTEDPRMQTPPYKYDLYGVTNHFGTLSGGHYTAFIASRGG------- 998
Query: 1005 KKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W + D V ++V+ AY+L+Y+++
Sbjct: 999 --------WVYCDDSRVTPTDAKQVVGRPAYVLYYKRV 1028
>gi|58258753|ref|XP_566789.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57222926|gb|AAW40970.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 576
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 102/218 (46%), Gaps = 47/218 (21%)
Query: 841 EMQSRSSCLR--------DSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGN 892
++SR C R DS S+ +G SV G + G++ E + D++
Sbjct: 208 RVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLA-GFTKEDRLEGDNKYHCER 266
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQD-----ARGRLSKLNG 947
C K K +ATK I++APPILT+HLKRFS + R R K N
Sbjct: 267 C---------------KRKANATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQ 311
Query: 948 HVNFSEIINLRPYM-DPGCTDHDNYDYRLVGVVEHLGT-MRGGHYVAYVRGGPKNKVKAK 1005
+ F + +++ PYM DP YRL GV H GT +R GHY +YVRG
Sbjct: 312 PIKFEQTLDIAPYMVDPASP---GTKYRLFGVTCHRGTELRFGHYTSYVRG--------- 359
Query: 1006 KESVGGVWYHASDVYVREVSLEEVLRCE-AYILFYEKI 1042
G W+HA D V V LE+VL + AY+L Y ++
Sbjct: 360 ---PSGQWFHADDDEVSPVQLEQVLNDKTAYLLSYIRV 394
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 305 FKGYQQHDSHELLRCLLDGLCSEELA----------FRKRNSPSEGNGISSNQGPVFVDY 354
F +Q D+HE R + D L + LA RK + + + +V
Sbjct: 144 FSKNRQEDTHEFFRFVTDALQNTALAKLPKCVLPYNHRKFAHTTSRDTPEKIKHTSWVYR 203
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
++GG++ S V C C + S ++ FLDLSL V
Sbjct: 204 IWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDV 235
>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
aries]
gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
aries]
Length = 606
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 24/213 (11%)
Query: 203 GNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE 262
G + + S S+ ++ + + GL NLGNTCF NS++Q L +L+DY L
Sbjct: 241 GKGQALVSSRSSSPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ-R 299
Query: 263 LTFGPLT------IALKKLFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS 313
L L+ AL + FA +T + +V++P F I AP+F GY Q D+
Sbjct: 300 LYLRDLSHSSRAHTALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDA 359
Query: 314 HELLRCLLDGLCSE--ELAFRKRNSPSEGNGISSNQG--PVFVDYV----------FGGQ 359
E LR LLDGL +E + R +++ + + ++ ++ Y+ F GQ
Sbjct: 360 QEFLRFLLDGLHNEVNRVTARPKSNTENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQ 419
Query: 360 IASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
+ S++ C +CG+ STV++PF DLSLP+ + P
Sbjct: 420 LKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYP 452
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
+ ++ K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+
Sbjct: 481 RARKRCIKKFSIQRFPKILVLHLKRFSE-SRIRTSKLTAFVNFPLRDLDLREFASEN-TN 538
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
H Y+ L V H GT GGHY AY R V G W+ +D V +S
Sbjct: 539 HAVYN--LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVSPMSSS 585
Query: 1028 EVLRCEAYILFYE 1040
+V +AY+LFYE
Sbjct: 586 QVRTSDAYLLFYE 598
>gi|351711884|gb|EHB14803.1| Ubiquitin carboxyl-terminal hydrolase 4 [Heterocephalus glaber]
Length = 964
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS--- 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLL 419
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 420 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 479 LPLPLKK 485
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDPSAR 861
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY K G WY+ D V S
Sbjct: 862 P---YMYDLIAVSNHYGAMGVGHYTAYA-----------KNRFSGKWYYFDDSNVSLASE 907
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 908 DQIVTKAAYVLFYQR 922
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS A GL NLGNTCF N+++Q+L + Q YF
Sbjct: 95 NSSLNSKLLKVNGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 150
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 151 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 210
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 211 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 270
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 271 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 303
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAA 414
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 415 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEDTVVKAKAYI 461
Query: 1037 LFY 1039
LFY
Sbjct: 462 LFY 464
>gi|449688380|ref|XP_002169084.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial
[Hydra magnipapillata]
Length = 565
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 88/187 (47%), Gaps = 32/187 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPET-- 283
GLAN+GNTCF NS +Q L + L YFL+ PL + K AET E
Sbjct: 18 GLANIGNTCFMNSALQCLSNTTPLTKYFLSNTYKHELNPNNPLGMQGK--IAETYAELLH 75
Query: 284 ---GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------- 333
G PR+F + APQF GYQQ DSHELL LLDGL E+L K
Sbjct: 76 HVWGSNTYFTPRNFKMQVGRFAPQFSGYQQQDSHELLAFLLDGL-HEDLNRVKQKPYIEL 134
Query: 334 ---RNSPSE-------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ P E N N + VD +F G STV+C C S ++PF LS
Sbjct: 135 QDDKGRPDEICAEEAWSNHTLRNSS-IIVD-LFHGLFKSTVKCPVCQKKSMTFDPFCYLS 192
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 193 LPLPIKK 199
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L + + AL FA +
Sbjct: 212 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 271
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ + ++P F I AP+F GY Q D+ E LR LLDGL SE + R R +
Sbjct: 272 SSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRANADTL 331
Query: 341 NGISSNQGP--VFVDY----------VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y +F GQ+ S++ C ECG+ ST ++PF DLSLP+P
Sbjct: 332 DHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPK 391
Query: 389 K 389
K
Sbjct: 392 K 392
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + TK+ I K P IL +HLKRFS+ AR R SKL+ VNF + ++LR + C +
Sbjct: 424 KARTRCTKKFSIQKFPKILVLHLKRFSE-ARIRASKLSTFVNFPLKDLDLREFASQSC-N 481
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
H Y+ L V H GT GGHY AY K + W+ +D V +S
Sbjct: 482 HAVYN--LYAVSNHSGTTMGGHYTAYC-----------KSPISSEWHSFNDSRVTPMSSS 528
Query: 1028 EVLRCEAYILFYE 1040
V +AY+LFYE
Sbjct: 529 HVRSSDAYLLFYE 541
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS A GL NLGNTCF N+++Q+L + Q YF
Sbjct: 95 NSSLNSKLLKVNGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 150
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 151 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 210
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 211 GYQQQDAHEFMRYLLDHLHLELQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVVTAIF 270
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 271 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 303
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + +N Y L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAA 414
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 415 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 461
Query: 1037 LFY 1039
LFY
Sbjct: 462 LFY 464
>gi|336363428|gb|EGN91818.1| hypothetical protein SERLA73DRAFT_66796 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1114
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 96/217 (44%), Gaps = 38/217 (17%)
Query: 209 IKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF---------- 258
I+SE V SD+ V GL NLGNTC+ NS +Q L A +F
Sbjct: 733 IQSEYPVTYWSDVQ----IVTSGLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNAVN 788
Query: 259 -LNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
LN T G L +A + E + L + + P +F ICS APQF G +QHDS E L
Sbjct: 789 MLNPLGTKGNLALAFSNILYEMA-HSELPH-LTPNAFRRSICSHAPQFSGSEQHDSQEFL 846
Query: 318 RCLLDGLCSE--------------------ELAFRKRNSPSEGNGISSNQGPVFVDYVFG 357
LLDGL + E ++ S E N + VDY F
Sbjct: 847 SFLLDGLHEDLNRVLQKPHYEVTPEREAELEKLPQQIASQQEWNLYRMRNDSLVVDY-FQ 905
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK 394
GQ + + C+ C +ST Y F+ L+LP+P + SK
Sbjct: 906 GQFRNRMECLTCHKTSTTYNTFMYLTLPIPIVRGSSK 942
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 41/158 (25%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLS-KLNGHVNFS----EIIN-----LR 958
K R ATKR+ +++ PPIL IHLKRFS +G + K+ V+F ++ N L
Sbjct: 972 KALRKATKRLSLSRLPPILLIHLKRFS--FKGPFTDKIETVVDFPLRTLDLTNYMPPPLP 1029
Query: 959 PYMDPGCTDHDN------------YDYRLVGVVEHLGTMRGGHYVAYV--RGGPKNKVKA 1004
P MD G + N Y Y L GV H GT+ GGHY A++ RGG
Sbjct: 1030 PGMDKGNMNGANLSTEDPRMQTPPYKYDLYGVTNHFGTLSGGHYTAFIASRGG------- 1082
Query: 1005 KKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W + D V ++V+ AY+L+Y+++
Sbjct: 1083 --------WVYCDDSRVTPTDAKQVVGRPAYVLYYKRV 1112
>gi|410898910|ref|XP_003962940.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Takifugu
rubripes]
Length = 1589
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 86/187 (45%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AEL-------TFGPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYFL+ AE+ T G L I L
Sbjct: 748 GLVNLGNTCFMNSVIQSLSNTRELRDYFLDRGFEAEINCSNPLGTGGRLAIGFAVLLRAL 807
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 808 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 863
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E + F+ +F GQ S + C C S ++PFL L
Sbjct: 864 ETVDSDGRLDEVVADEAWQRHKMRNDSFIVDLFQGQFKSKLVCPMCSKVSITFDPFLYLP 923
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 924 VPLPQKQ 930
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNY 971
R+A+K++L+ + P +L I LKRFS + K+N V+F I NL + C +
Sbjct: 1387 REASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFP-IRNLD--LSKFCIGMKDE 1443
Query: 972 D-----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y L V+ H G M GGHY AY R P +K +++ VG W D V V
Sbjct: 1444 MQQPPIYDLYAVINHYGGMIGGHYTAYAR-LPSDK-NSQRSDVG--WRLFDDSTVTMVDE 1499
Query: 1027 EEVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1500 SQVVTRYAYVLFYRR 1514
>gi|198433558|ref|XP_002125579.1| PREDICTED: similar to ubiquitin specific protease 32 [Ciona
intestinalis]
Length = 1588
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 92/184 (50%), Gaps = 31/184 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKPE- 282
GL+NLGNTCF NS +Q + L YFL + F PL + + K + + E
Sbjct: 736 GLSNLGNTCFMNSGLQCISNTRPLTKYFLENKHLFELNRTNPLGMKGHIAKRYCDLTQEL 795
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + P I AP+F G+ QHDS ELL LLDGL E+L R + P
Sbjct: 796 WSGASKTVAPLKLRWTISKYAPRFNGFSQHDSQELLAFLLDGL-HEDLN-RVQTKPYVEL 853
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
S+G N ++ NQ + VD +F GQI S VRC+ C ST ++PF LS
Sbjct: 854 KDSDGRPDEEVAQEAWENHLARNQS-IIVD-LFHGQIRSRVRCLHCNAFSTRFDPFTFLS 911
Query: 384 LPVP 387
LP+P
Sbjct: 912 LPLP 915
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L V H G + GGHY+AY KNKV K WY +D +EVS + +
Sbjct: 1493 YDLYAVSCHSGILGGGHYIAYA----KNKVNNK-------WYCYNDSSCKEVSADNICVE 1541
Query: 1033 EAYILFYEK 1041
AY LFYE+
Sbjct: 1542 TAYTLFYER 1550
>gi|297710131|ref|XP_002831758.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pongo abelii]
Length = 711
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 33/291 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + + E+
Sbjct: 249 CLSCVFFGC-------FTEKHIHKHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 300
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--STVVSGSDLDGNACY 227
K+ ++++L+ ST++S + F + E K + V + Y
Sbjct: 301 A--KETKEKILRLLTSTSTDVSHQQFMTSGFEDKQLTCETKEQEPKLVKPKKKRRKKSVY 358
Query: 228 VV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
V RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 359 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 418
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 419 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 468
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
G +N +D +F G + S V C C ST +P D+SL +P
Sbjct: 469 SGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLP 519
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--------MDP 963
+++TK++ + K P + HLKRF + R K+N ++F +++ P+ M
Sbjct: 577 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKESRMKE 635
Query: 964 G-----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
G C ++N Y L V+ H GT+ GHY +++R +K+ W+ D
Sbjct: 636 GQPPTDCVPNEN-KYSLFAVINHHGTLESGHYTSFIR--------QQKDQ----WFSCDD 682
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 683 AIITKATIEDLLYSEGYLLFYHK 705
>gi|444722556|gb|ELW63246.1| Ubiquitin carboxyl-terminal hydrolase 2 [Tupaia chinensis]
Length = 395
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 96/185 (51%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT------IALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L+ AL + FA +
Sbjct: 58 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYLRDLSHSSSTHTALMEEFAKLIQAIW 116
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R + SP
Sbjct: 117 TSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTARPKPSPEN 176
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + ++ ++ Y+ F GQ+ S++ C +CG STV++PF DLSLP+
Sbjct: 177 LDHLPDDEKGRQMWRRYLEREDSRIGDLFVGQLKSSLTCTDCGFCSTVFDPFWDLSLPIA 236
Query: 388 TKKAP 392
+ P
Sbjct: 237 KRGYP 241
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 277 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 332
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 333 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVSPMSSSQVRTSDA 381
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 382 YLLFYE 387
>gi|302756229|ref|XP_002961538.1| hypothetical protein SELMODRAFT_61965 [Selaginella moellendorffii]
gi|300170197|gb|EFJ36798.1| hypothetical protein SELMODRAFT_61965 [Selaginella moellendorffii]
Length = 567
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIALKKLFAETK 280
GL NLGNTCF NS +Q L +L +YFL N G L +A +L K
Sbjct: 7 GLQNLGNTCFMNSALQCLAHTPELVEYFLQDYDDEINPANPLGMEGELAVAFGELI--RK 64
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
G R V+ PR F + APQF GY QHDS ELL LLDGL E+L K E
Sbjct: 65 LWAG-REVVVPRPFKNKLSRFAPQFSGYNQHDSQELLAFLLDGL-HEDLNRVKSKPYIEV 122
Query: 341 NGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
I + + VD +F GQ ST+ C C S ++PF+ LSL
Sbjct: 123 KDIDGRPDGEVADEYWAIHKARNNSIIVD-LFQGQYKSTLVCPVCAKVSVTFDPFMYLSL 181
Query: 385 PVPTKK 390
P+P K+
Sbjct: 182 PLPEKQ 187
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 19/134 (14%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A+K++ + + P IL +HLKRFS +KL V+F ++L Y+
Sbjct: 452 KEHRQASKKLDLWRLPEILVVHLKRFSYSRYS--NKLETLVDFPVHDLDLSKYVS----- 504
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
H Y L V H G + GGHY AY + +NK WY+ D V +S +
Sbjct: 505 HRTDPYELFAVSNHYGGVGGGHYTAYAKLCNENK-----------WYNFDDSCVNPMSPD 553
Query: 1028 EVLRCEAYILFYEK 1041
+ AY+LFY +
Sbjct: 554 SIKTTAAYVLFYRR 567
>gi|299856909|pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With
Ubiquitin
Length = 348
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 98/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNT F NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 11 GLRNLGNTXFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 70
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 71 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 130
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 131 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 190
Query: 389 KKAP 392
+ P
Sbjct: 191 RGYP 194
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 230 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 285
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R G W+ +D V +S +V +A
Sbjct: 286 LYAVSNHSGTTMGGHYTAYCRSPGT-----------GEWHTFNDSSVTPMSSSQVRTSDA 334
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 335 YLLFYE 340
>gi|302775718|ref|XP_002971276.1| hypothetical protein SELMODRAFT_61966 [Selaginella moellendorffii]
gi|300161258|gb|EFJ27874.1| hypothetical protein SELMODRAFT_61966 [Selaginella moellendorffii]
Length = 567
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIALKKLFAETK 280
GL NLGNTCF NS +Q L +L +YFL N G L +A +L K
Sbjct: 7 GLQNLGNTCFMNSALQCLAHTPELVEYFLQDYDDEINPANPLGMEGELAVAFGELI--RK 64
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
G R V+ PR F + APQF GY QHDS ELL LLDGL E+L K E
Sbjct: 65 LWAG-REVVVPRPFKNKLSRFAPQFSGYNQHDSQELLAFLLDGL-HEDLNRVKSKPYIEV 122
Query: 341 NGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
I + + VD +F GQ ST+ C C S ++PF+ LSL
Sbjct: 123 KDIDGRPDGEVADEYWAIHKARNNSIIVD-LFQGQYKSTLVCPVCAKVSVTFDPFMYLSL 181
Query: 385 PVPTKK 390
P+P K+
Sbjct: 182 PLPEKQ 187
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 19/134 (14%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A+K++ + + P IL +HLKRFS +KL V+F ++L Y+
Sbjct: 452 KEHRQASKKLDLWRLPEILVVHLKRFSYSRYS--NKLETLVDFPVHDLDLSKYVS----- 504
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
H Y L V H G + GGHY AY + +NK WY+ D V +S +
Sbjct: 505 HRTDPYELFAVSNHYGGVGGGHYTAYAKLCNENK-----------WYNFDDSCVNPMSPD 553
Query: 1028 EVLRCEAYILFYEK 1041
+ AY+LFY +
Sbjct: 554 SIKTTAAYVLFYRR 567
>gi|449018932|dbj|BAM82334.1| ubiquitin-specific protease [Cyanidioschyzon merolae strain 10D]
Length = 660
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGC------TD 967
A K + + AP L +H+KRF+Q G ++K++ H++F E ++L + D
Sbjct: 517 ARKWMRLENAPRCLVLHMKRFTQLDVGYVTKIDDHISFPETLSLGELSETEALAPMVAAD 576
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L GVVEH GT+ GHYVAYVR +V + W++ SD ++R +L+
Sbjct: 577 LARVRYELCGVVEHNGTLHFGHYVAYVRA---RRVATSNQQ----WFYCSDRHIRSCTLD 629
Query: 1028 EVLRCEAYILFYEKI 1042
EVL+ +AY+LFY ++
Sbjct: 630 EVLQAQAYLLFYFRV 644
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 88/199 (44%), Gaps = 45/199 (22%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----NAELTF-GPLTIAL------------- 272
GL NLGNTCFFNSV+Q L + LQ YF NA + F G +T+AL
Sbjct: 54 GLENLGNTCFFNSVLQCLARLPSLQSYFQSTKSNAIVRFEGAVTLALRLFLMTLWRHERQ 113
Query: 273 ---KKLFAETKPETGLRNVINP------------------RSFFGCICSKAPQFKGYQQH 311
K++FA++ TG + I R F I K P+FKG+ Q
Sbjct: 114 RAQKRIFADSS--TGTESDIAAGSSAPNHTNDSAALERATRRLFEEIGEKCPRFKGWAQQ 171
Query: 312 DSHELLRCLLDGLCSEE---LAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVE 368
D+HELL LL + EE L K S + + + Q FV +F ++ +
Sbjct: 172 DAHELLLALLWTIDDEEQERLRAGKSMSKTPDSAKTVEQARSFVRDIFECRVEDRLEMPS 231
Query: 369 CGHSSTV-YEPFLDLSLPV 386
G V +E L LSLP+
Sbjct: 232 SGGKPQVRHEECLALSLPI 250
>gi|302687378|ref|XP_003033369.1| hypothetical protein SCHCODRAFT_76094 [Schizophyllum commune H4-8]
gi|300107063|gb|EFI98466.1| hypothetical protein SCHCODRAFT_76094 [Schizophyllum commune H4-8]
Length = 1137
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 91/190 (47%), Gaps = 35/190 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTI--ALKKLFAETKPET 283
GL NLGNTCF NS +Q L +L +YFL+ EL PL + A+ + F +
Sbjct: 277 GLTNLGNTCFMNSALQCLAHQEELTEYFLSGVFKQELNPDNPLGMHGAIAEAFGDLLQHI 336
Query: 284 GLRNV---INPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE------------- 327
R+ +PR F + APQF GYQQHDS EL+ LLDGL +
Sbjct: 337 WARSSASSYSPRDFKMQLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKP 396
Query: 328 --------ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
ELA + S +G V VD +F GQ ST+ C EC S ++PF
Sbjct: 397 DWEGGGDLELAQLAKKS---WDGYMLRNDSVIVD-LFQGQYQSTLVCPECQKVSITFDPF 452
Query: 380 LDLSLPVPTK 389
+ L+LP+P +
Sbjct: 453 MYLTLPLPIQ 462
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 31/152 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY------- 960
K + ATKR + K P IL +HLKRFS ++R K++ V+F E ++L
Sbjct: 810 KKHQQATKRFDLWKTPDILVVHLKRFS-NSRALRDKIDAFVDFPIEGLDLAGMAGERKVA 868
Query: 961 -------MDPGCTDHDNYD----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESV 1009
+D + N + Y L V EH+G + GGHY AY K
Sbjct: 869 NRLKEEGVDASELNLGNAEEPLLYDLFAVDEHMGGLGGGHYRAYALNHETKK-------- 920
Query: 1010 GGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
WYH D +V E ++ + AY+LFY +
Sbjct: 921 ---WYHFDDSFVTEAEAKDSVNSNAYLLFYRR 949
>gi|323455492|gb|EGB11360.1| hypothetical protein AURANDRAFT_11968, partial [Aureococcus
anophagefferens]
Length = 369
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 29/201 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN---AELTFG--PLTIALKKLFAETKPETGL 285
GL NLGNTCF N+ +Q LL ++ L + FL+ A + G P A+ FAE +
Sbjct: 3 GLTNLGNTCFLNAPLQCLLGVAPLVEVFLDGSYAAMVNGASPSKGAIAHAFAELVRDVYA 62
Query: 286 ---RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR-------- 334
+ ++P I APQF+G+ QHD EL R LLDGL +E+L
Sbjct: 63 AEPHSAVSPAKLKRVIGQHAPQFQGHSQHDCQELFRYLLDGL-AEDLKLPPPPPPRPPEP 121
Query: 335 ------NSPSEGNGISSNQGPV------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ P+ + S+ V F GQ+ S+V C C H ST ++P+LD+
Sbjct: 122 GPETEDDEPAADDAGESSWAAYRRNNRSLVTDTFCGQLRSSVECCSCHHVSTCFDPYLDI 181
Query: 383 SLPVPTKKAPSKKTQPASRAK 403
SLP+P A + P R +
Sbjct: 182 SLPIPAAAAGGNEAGPDGRPR 202
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 21/135 (15%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS----EIINLRPYMDPGCTD 967
R K + I+ P IL +H+KRF+ + R KL V F ++ N G
Sbjct: 251 RKCVKWLTIHSWPKILVLHVKRFAYTSVRR-EKLATLVTFPVKGLDLGNFISKERDGAAV 309
Query: 968 HDNYDYRLVGVVEHLGTMR-GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
YD L +HLG GHYVA +VG W+ +D V V+
Sbjct: 310 KPVYD--LFATSDHLGDRETSGHYVANC-------------AVGDAWHQFNDARVSPVTQ 354
Query: 1027 EEVLRCEAYILFYEK 1041
EE+ +Y+LFY +
Sbjct: 355 EELQGAASYVLFYRR 369
>gi|147899880|ref|NP_001082452.1| ubiquitin specific peptidase 4 (proto-oncogene) [Xenopus laevis]
gi|84570095|gb|AAI10726.1| LOC398480 protein [Xenopus laevis]
Length = 975
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 99/218 (45%), Gaps = 38/218 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL+NLGNTCF NS +Q L L YFL E G + +A +L +
Sbjct: 323 GLSNLGNTCFMNSALQCLSNSPPLTRYFLTDEYKKEINRENPLGMKGEIAVAYAELIRQI 382
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G + + PR F + APQF GYQQ DS ELL LLDGL E+L K+ E
Sbjct: 383 --WSGDHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLNRVKKKPYLE 439
Query: 340 -----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
N + N + VD +F G ST+ C EC S ++PF L
Sbjct: 440 LKDANGRPDSIVAAEAWENHLRRNNS-IIVD-IFHGLFKSTLVCPECHKVSVTFDPFCYL 497
Query: 383 SLPVPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+LP+P KK + ++ P + K+ +L K G +
Sbjct: 498 TLPLPMKKDRTMEVFFVRSDPHCKPKQYRLTVPKMGVV 535
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 820 KKHQRATKKFDLWSLPKILVVHLKRFSYNRFWR-DKLDAVVEFPIRDLNMSEFVCDPQAG 878
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y LV V +H G M GGHY AY + K++ WY+ D V S
Sbjct: 879 P---FVYDLVAVSDHYGGMGGGHYTAYAKNQDKDQ-----------WYYFDDSSVSPASE 924
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 925 DQIVTKAAYVLFYQR 939
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 137/322 (42%), Gaps = 45/322 (13%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVI-----QWENPHLRWCFPCN 158
+K+ WVCL C CG H +H + PL+ + E C C+
Sbjct: 35 NKSPWVCLTCSSVLCG-----RYVNGHAKKHYEDAQIPLLNHKRSEKQEKAQHTVCMDCS 89
Query: 159 TL-IPVEKTEENGENKDALSEVVKLIKG-RSTEISSVDVEDAWFGSGNVNSEIKSESTVV 216
+ + ++ N L V K+ + +S E S+ + NS + S+ V
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQSLENSAFTADRHRKRKLLENSSLNSKLLKV 149
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------LNAELTFGPLT 269
+GS A GL NLGNTCF N+++Q+L + Q YF L T G T
Sbjct: 150 NGS----TAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT 205
Query: 270 ----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
++L + F +T G + +P S F + P F+GY+Q D+HE +
Sbjct: 206 YHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYRQQDAHEFM 265
Query: 318 RCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCV 367
R LLD L S ++ ++ S N N V +FGG + + V C+
Sbjct: 266 RYLLDHLHLELQGGFNGVSRSAILQENSTLSANNKCCINGASTVVTTIFGGILQNEVNCL 325
Query: 368 ECGHSSTVYEPFLDLSLPVPTK 389
CG S ++PFLDLSL +P++
Sbjct: 326 ICGTESRKFDPFLDLSLDIPSQ 347
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P L +HLKRF A R +K++ +V F ++++ Y ++P + D+ Y L
Sbjct: 400 IQKLPKALCLHLKRFHWTAYLR-NKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
V H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 459 VFVHHGSGVGSGHYTAY----------AVHE---GRWFHFNDSTVTVTDEETVGKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|348581460|ref|XP_003476495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cavia
porcellus]
Length = 932
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 271 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 328
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS--- 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 329 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLL 387
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 388 PKDANGRPDVVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 446
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 447 LPLPLKK 453
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 771 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDPSAQ 829
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK K WY+ D V S
Sbjct: 830 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKFSGK-------WYYFDDSNVSLASE 875
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 876 DQIVTKAAYVLFYQR 890
>gi|307177521|gb|EFN66632.1| Ubiquitin carboxyl-terminal hydrolase 2 [Camponotus floridanus]
Length = 762
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 92/194 (47%), Gaps = 26/194 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y LN + T + AL K F++ E
Sbjct: 422 LNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHE 481
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G +V+N + I AP+F GY Q D+ E LR LL+GL + + P
Sbjct: 482 LWEVGGDHVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIH 541
Query: 340 GNGISS----------------NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
G+ S ++ + VD VF GQ+ S++ C C H S +PF DLS
Sbjct: 542 GDIPDSYTDMQKAVESWKRYLRSEDSMIVD-VFVGQLRSSLHCTSCDHVSVTLDPFWDLS 600
Query: 384 LPVPTKKAPSKKTQ 397
LP+P + K +Q
Sbjct: 601 LPIPGRSGTVKLSQ 614
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMD---PG 964
+++R TK I K P IL IHLKRFS R R KLN V+F ++L + PG
Sbjct: 637 QMRRKCTKSFSIQKFPKILVIHLKRFSPMERFR-GKLNVMVDFPLTGLDLSAFAAPRVPG 695
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
CT Y L GV H GT GHY AY K G W+ +D V V
Sbjct: 696 CT------YNLYGVANHSGTTYSGHYTAYC-----------KHPYSGEWHEYNDSRVSVV 738
Query: 1025 SLEEVLRCEAYILFYEK 1041
S V+ EAY+LFYE+
Sbjct: 739 SSRSVVSSEAYVLFYEQ 755
>gi|242042990|ref|XP_002459366.1| hypothetical protein SORBIDRAFT_02g003380 [Sorghum bicolor]
gi|241922743|gb|EER95887.1| hypothetical protein SORBIDRAFT_02g003380 [Sorghum bicolor]
Length = 867
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 100/219 (45%), Gaps = 52/219 (23%)
Query: 203 GNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL--- 259
G++NS++ S +GS + GL NLGNTCF NS +Q L +L DYFL
Sbjct: 224 GDMNSDLSYRSFGRAGS-------MGLIGLENLGNTCFMNSSIQCLAHTPKLVDYFLGDY 276
Query: 260 ------------NAELT--FGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQF 305
N EL FG L L+ L+ + KP I P F I APQF
Sbjct: 277 ANNINRTNPLGLNGELALAFGEL---LRSLWTDRKP-------IPPHHFKEKIACFAPQF 326
Query: 306 KGYQQHDSHELLRCLLDGLCSE---------ELAFRKRNSPSE-------GNGISSNQGP 349
G+ QHDS ELL LLDGL + E A P E N ++ N
Sbjct: 327 SGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDASGRPDEEVADEYWSNHLARNDS- 385
Query: 350 VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
V VD GQ ST+ C C +S ++PF+ LSLPVP+
Sbjct: 386 VIVD-TCHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPS 423
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTD 967
K + A K++ + + P +L IHLKRFS R +KL V+F ++L Y+
Sbjct: 746 KKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTR-NKLETFVDFPTTDLDLSSYIADKSKQ 804
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ YRL + H G M GGHY A + G WY D YV +S +
Sbjct: 805 PSSH-YRLYAISNHYGNMGGGHYTASIY-----------HEEGKGWYKFDDDYVTPMSED 852
Query: 1028 EVLRCEAYILFYEK 1041
+ AY+LFY +
Sbjct: 853 SIKTSAAYVLFYRR 866
>gi|414868202|tpg|DAA46759.1| TPA: hypothetical protein ZEAMMB73_550567 [Zea mays]
Length = 525
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFG---PLTIALKKLFAE 278
+ GL NLGNTCF NS +Q+L+ L YFL N E G L IA +L
Sbjct: 311 LSGLHNLGNTCFMNSAIQSLVHTPPLVQYFLEDYTCEINKENPLGLQGELAIAFGELL-- 368
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS 338
K + R I PR+F + APQF GY QHDS ELL LLDGL E+L K
Sbjct: 369 RKLWSSGRTSIAPRAFKSKLSRFAPQFSGYNQHDSQELLAFLLDGL-HEDLNRVKEKPYI 427
Query: 339 EG----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
E N + + VD F GQ ST+ C C S ++PF+ L
Sbjct: 428 EAKDADGRPDDEFAEECWNYHKARNDSIIVD-KFQGQYKSTLVCPVCNKISVTFDPFMYL 486
Query: 383 SLPVPT 388
SLP+P+
Sbjct: 487 SLPLPS 492
>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
Length = 913
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 25/186 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----NAEL--TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y + N+++ T + AL K FA E
Sbjct: 578 LNGLRNIGNTCFMNSVLQCLSNTRPLLEYLVDDKYNSDINTTLSCMKGALIKAFASVIKE 637
Query: 283 ---TGLRN-VINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP- 337
+G R+ V+N + + AP+F GY Q D+ E LR LL+GL + + P
Sbjct: 638 LWRSGDRDCVVNTTALKSQVQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPKPI 697
Query: 338 ----SEGNGISSNQGPVFVDY----------VFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ S+ + Y +F GQ+ ST+RC C H S ++PF DLS
Sbjct: 698 LTEIDDSLSDSAKAAEAWSRYLRTEDSRVGDIFVGQLKSTLRCTHCLHDSVTFDPFWDLS 757
Query: 384 LPVPTK 389
LP+P++
Sbjct: 758 LPIPSR 763
Score = 66.6 bits (161), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHD 969
V+R K ++K P +L +HLKRFS R R KL+ V F + L M P
Sbjct: 795 VRRKCLKWFTVHKFPQVLVLHLKRFSPTERFR-GKLSVVVEFP-LSGLD--MSPFAASPT 850
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
+ Y L V H GT GHY AY K G W+ +D V + ++
Sbjct: 851 HATYNLYAVSNHSGTTYSGHYTAYC-----------KHPYTGDWHEYNDSRVTPIRSRDI 899
Query: 1030 LRCEAYILFYE 1040
+ EAY+LFYE
Sbjct: 900 VSAEAYVLFYE 910
>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
guttata]
Length = 625
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 92/183 (50%), Gaps = 22/183 (12%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKP-- 281
+ GL NLGNTCF NS++Q L +L+DY L + + AL FA+
Sbjct: 286 LTGLRNLGNTCFMNSILQCLSNSKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLL 345
Query: 282 -ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPS 338
+ ++P F I AP+F GY Q D+ E LR LLDGL SE + R R S
Sbjct: 346 WTSSPNESVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRASTD 405
Query: 339 EGNGISSNQGP--VFVDY----------VFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ + ++ ++ Y +F GQ+ S++ C ECG+ ST ++PF DLSLP+
Sbjct: 406 SLDHLPDDEKSRQMWRRYQEREDSRISDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPI 465
Query: 387 PTK 389
P K
Sbjct: 466 PKK 468
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + TK+ I K P IL +HLKRFS+ AR R SKL VNF + ++LR + C
Sbjct: 500 KARTRCTKKFSIQKFPKILVLHLKRFSE-ARIRSSKLTTFVNFPLKDLDLREFASQSC-- 556
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L V H GT GGHY AY K V W+ +D V +S
Sbjct: 557 -NHAVYNLYAVSNHSGTTMGGHYTAYC-----------KSPVSSEWHSFNDSRVTPMSSS 604
Query: 1028 EVLRCEAYILFYE 1040
V +AY+LFYE
Sbjct: 605 HVRSSDAYLLFYE 617
>gi|71681187|gb|AAI00030.1| USP3 protein, partial [Homo sapiens]
Length = 393
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 136/337 (40%), Gaps = 75/337 (22%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPL---------------VIQWEN 148
+K+ WVCL C CG H +H + PL V +
Sbjct: 35 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCS 89
Query: 149 PHLRWCFPCNTLIP-------VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFG 201
+ +C+ C+ + V+K E+ +N + + K R +E
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKL------LE----- 138
Query: 202 SGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 ----NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKEL 190
Query: 259 ----LNAELTFGPLT----------IALKKLFAETKPET--GLRNVINPRSFFGCICSKA 302
L T G T ++L + F +T G + +P S F +
Sbjct: 191 PAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 250
Query: 303 PQFKGYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFV 352
P F+GYQQ D+HE +R LLD L S ++ ++ S N N V
Sbjct: 251 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 310
Query: 353 DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
>gi|145478739|ref|XP_001425392.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392462|emb|CAK57994.1| unnamed protein product [Paramecium tetraurelia]
Length = 572
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 75/137 (54%), Gaps = 17/137 (12%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM----DPGCTDHD 969
A ++ + P + TI LKRF Q + GR K++ V+ E I L Y +P T +
Sbjct: 445 ALRKFFLYDLPQVATIILKRFQQKSAGRFEKVSEQVDIPETIYLEDYTILKGEPSQTVEE 504
Query: 970 ----NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
Y Y+L GVV H GTM GGHY++YV+ KE+ W++ SD +EVS
Sbjct: 505 IKAQKYPYQLYGVVVHQGTMTGGHYISYVK---------HKENNQDHWFYFSDSNFKEVS 555
Query: 1026 LEEVLRCEAYILFYEKI 1042
L++ L +AYILFYE++
Sbjct: 556 LKQALSNQAYILFYERV 572
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 159/389 (40%), Gaps = 64/389 (16%)
Query: 108 WVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPC-NTLIPVEKT 166
W+C+ CG + C + +H +QT HPL I N WC+ C N L +++
Sbjct: 44 WLCIECGFFGCS----RNSDNQCSFKHNQQTNHPLSISI-NSFAIWCYVCDNDLETIQEE 98
Query: 167 EENGENKDALSEVVKLIKG-----------RSTEISSVDVEDAWFGSGNVNSEIKSESTV 215
+N K+ +S+ + +K T V+ ++ EIK ++T
Sbjct: 99 TDNKGQKEKISKFIDNMKNLLFKKIKQNKPTQTIQQFQQVQQQQSQPQTLSQEIKQQAT- 157
Query: 216 VSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-NAELTFGPLTIAL-- 272
L+ V GL NLGNTCFFNSVMQ L A L ++L + + F + +
Sbjct: 158 ---QPLNYTPKQVF-GLRNLGNTCFFNSVMQCLNATESLNSFYLDHKKFNFSSYSQNVDN 213
Query: 273 ------------KKLFAETKPETGL-----------------RNVINPRSFFGCICSKAP 303
K++ + +P++ + +++P F I +
Sbjct: 214 DEDDDWTTVENNKQIKQQVRPKSSKLSINQIYQNFLLNSRKSKGLVDPVDLFKSIQAVQG 273
Query: 304 QFKGYQQHDSHELLRCLLDGLCS-EELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIAS 362
+F+ Q D+ ELLRCLLD L + EE R + ++ NG V+ +FG + +
Sbjct: 274 RFRSMAQQDASELLRCLLDALSTGEENTHIGRINKTKTNGKPKR---TIVENIFGSYLCN 330
Query: 363 TVRCVECGHSSTVYEPFLDLSLPVP------TKKAPSKKTQPASRAKKTKLPPKKSGRIR 416
+ C++CG S ++ LD ++ + ++ + + S K + P I
Sbjct: 331 YLECLDCGFISRTFDFCLDYTVQIRKPKGLINQRFQEEYQEITSEELKDVIVPYLHNSIL 390
Query: 417 AKGTKDTHAVTTQSISNLSISSKSQSLTE 445
+ + V Q NLS+ + TE
Sbjct: 391 VQKNNNPPKVDQQKQYNLSVVDCLDAFTE 419
>gi|27503316|gb|AAH42353.1| LOC398480 protein [Xenopus laevis]
Length = 973
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 99/218 (45%), Gaps = 38/218 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL+NLGNTCF NS +Q L L YFL E G + +A +L +
Sbjct: 321 GLSNLGNTCFMNSALQCLSNSPPLTRYFLTDEYKKEINRENPLGMKGEIAVAYAELIRQI 380
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G + + PR F + APQF GYQQ DS ELL LLDGL E+L K+ E
Sbjct: 381 --WSGDHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLNRVKKKPYLE 437
Query: 340 -----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
N + N + VD +F G ST+ C EC S ++PF L
Sbjct: 438 LKDANGRPDSIVAAEAWENHLRRNNS-IIVD-IFHGLFKSTLVCPECHKVSVTFDPFCYL 495
Query: 383 SLPVPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+LP+P KK + ++ P + K+ +L K G +
Sbjct: 496 TLPLPMKKDRTMEVFFVRSDPHCKPKQYRLTVPKMGVV 533
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 818 KKHQRATKKFDLWSLPKILVVHLKRFSYNRFWR-DKLDAVVEFPIRDLNMSEFVCDPQAG 876
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y LV V +H G M GGHY AY + K++ WY+ D V S
Sbjct: 877 P---FVYDLVAVSDHYGGMGGGHYTAYAKNQDKDQ-----------WYYFDDSSVSPASE 922
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 923 DQIVTKAAYVLFYQR 937
>gi|344258659|gb|EGW14763.1| Ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus griseus]
Length = 471
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 258 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 317
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE-- 339
G I P F + A QF GYQQHDS ELL LLDGL E+L K E
Sbjct: 318 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGL-HEDLNRVKNKEYVELC 376
Query: 340 -GNGI-------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
G G V VD F G ST+ C +CG+ S ++PF LS+P
Sbjct: 377 DGAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVP 435
Query: 386 VP--TKKAPSKKTQPASRAKKTKLPPKKSGRIRAKGTKDT 423
+P +++ P +K P++ GR KD
Sbjct: 436 LPVSSRRVLEVFFVPMDPRRK----PEQVGREYGNTMKDM 471
>gi|350578538|ref|XP_003480384.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Sus
scrofa]
Length = 288
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 109/242 (45%), Gaps = 40/242 (16%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 51 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 106
Query: 259 LNAELTFGPLT----------IALKKLFAETKPET--GLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 107 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 166
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 167 GYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIF 226
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIR 416
GG + + V C+ CG S ++PFLDLSL +P++ R+K + P S R++
Sbjct: 227 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRN-------KRSKNQENGPVCSLRVK 279
Query: 417 AK 418
AK
Sbjct: 280 AK 281
>gi|417405449|gb|JAA49435.1| Putative ubiquitin carboxyl-terminal hydrolase 4 [Desmodus
rotundus]
Length = 963
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 91/190 (47%), Gaps = 33/190 (17%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE- 282
V GL NLGNTCF NS +Q L + L DYFL E PL +K AET E
Sbjct: 301 VCGLGNLGNTCFMNSALQCLSNTAPLTDYFLRDEYEAEINRDNPL--GMKGEIAETYAEL 358
Query: 283 -----TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 359 IKQMWSGRDAYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKP 416
Query: 338 ----SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
+ NG + + + V VD F G ST+ C EC S ++PF
Sbjct: 417 YLELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFC 475
Query: 381 DLSLPVPTKK 390
L+LP+P K+
Sbjct: 476 YLTLPLPLKR 485
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS R KL+ V F +N+ ++ DP
Sbjct: 802 KKHQQATKKFDLWALPKILVVHLKRFSYSRYWR-DKLDTVVEFPIRGLNMSEFVCDPSAR 860
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK+ K WY+ D V S
Sbjct: 861 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKLNRK-------WYYFDDSNVSLASE 906
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 907 DQIVTKAAYVLFYQR 921
>gi|255555787|ref|XP_002518929.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223541916|gb|EEF43462.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 938
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 90/193 (46%), Gaps = 44/193 (22%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAE----------LTFGPLTIA 271
+ GL N+GNTCF NS +Q L+ L DYFL NAE L FG L
Sbjct: 325 LAGLQNMGNTCFMNSALQCLVHTPPLVDYFLKDYSDEINAENPLGMHGELALAFGDL--- 381
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+KL++ R PR F G + APQF GY QHDS ELL LLDGL E+L
Sbjct: 382 LRKLWSSG------RTTFAPRVFKGKLALFAPQFSGYNQHDSQELLAFLLDGL-HEDLNR 434
Query: 332 RKRN----------SPSE------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTV 375
K+ P E + V VD V GQ ST+ C C S
Sbjct: 435 VKQKPYIEMKDWGGRPDEEVADECWRNHKARNDSVIVD-VCQGQYKSTLVCPVCSKISIT 493
Query: 376 YEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 494 FDPFMYLSLPLPS 506
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K R ATK++ + P IL HLKRFS +R +KL+ V+F I NL D
Sbjct: 804 KEHRQATKKLDLWTLPEILVFHLKRFSY-SRYLKNKLDTFVDFP-IHNLDLSKFVKRKDD 861
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
+Y Y L + H G + GGHY A+ + +++ WY+ D V V+ +
Sbjct: 862 RSYVYELYAISNHYGGLGGGHYTAFAKLMDESR-----------WYNFDDSRVSPVNEAD 910
Query: 1029 VLRCEAYILFYEKI 1042
+ AY+LFY ++
Sbjct: 911 IKTSAAYVLFYRRV 924
>gi|308469287|ref|XP_003096882.1| hypothetical protein CRE_24714 [Caenorhabditis remanei]
gi|308241297|gb|EFO85249.1| hypothetical protein CRE_24714 [Caenorhabditis remanei]
Length = 901
Score = 93.2 bits (230), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 100/216 (46%), Gaps = 39/216 (18%)
Query: 210 KSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------ 263
+S ST ++ G AC GL+NLGNTCF S Q L M L+DYFLN
Sbjct: 265 QSSSTGIANRTTPG-AC----GLSNLGNTCFMASAFQCLSNMPPLRDYFLNDSYLSDLNV 319
Query: 264 -----TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
T G L A+ +L +G INPR F G I AP+F GY Q D+HEL+
Sbjct: 320 ENPLGTHGHLAAAVGELMKGMW--SGEFASINPRKFKGIIGQFAPRFNGYSQQDAHELMA 377
Query: 319 CLLDGLCSEELAFRKRNSPSEGNGISSNQGP------------------VFVDYVFGGQI 360
+LDGL E+L R + P + + P + VD GQ+
Sbjct: 378 YVLDGL-HEDLN-RIKKKPYIEDSDEDAKLPEAEYAAKSWEIYKMRNDSIIVD-TLHGQL 434
Query: 361 ASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKT 396
ST+ C C S ++PF LSLP+P K+ K+T
Sbjct: 435 KSTLICPVCEKISIKFDPFGYLSLPLPAKEQIVKQT 470
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD------ 967
ATK++ + K P IL +HLKRF R KL V + P TD
Sbjct: 729 ATKQLDLWKLPEILILHLKRFQYTKWSR-EKLTWEV-------VIPVRGLDLTDKVANPN 780
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVA 992
H+ Y L+ V H G++ GGHY A
Sbjct: 781 HEKAIYDLIAVSRHYGSLSGGHYTA 805
>gi|308808989|ref|XP_003081804.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
gi|116060271|emb|CAL55607.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
Length = 688
Score = 93.2 bits (230), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 111/243 (45%), Gaps = 46/243 (18%)
Query: 163 VEKTEENGENKDALSEVVKLIKGRSTE-----ISSVDVEDAWFGSGNVNSEIKSESTVVS 217
VE+T + + DA E+ + + R + ++ DV +WFG+ +
Sbjct: 74 VEETTTSNKGTDAEDEMPRGMSTRGMDRGDDLYATRDVRMSWFGARRAGA---------- 123
Query: 218 GSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLF- 276
GLANLGNTCF NSV+Q L L + L+ E + + ++
Sbjct: 124 -------------GLANLGNTCFLNSVLQCLTHTPALAHFALSGEHKKYKTSGSFNAMYE 170
Query: 277 -----AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEE 328
A +G I P + + + + F+ +Q D+HEL RCLLD + C E
Sbjct: 171 IGEHVARALNSSG--RTIAPTAVVKNMRALSKTFRKGRQEDAHELARCLLDAMHKKCVEL 228
Query: 329 LAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + + SP+ G +S FV VFGG++ S V C CG +S ++PFLDLSL V
Sbjct: 229 V--KPKISPNSARGETS-----FVWKVFGGKLRSRVNCKTCGRNSETFDPFLDLSLEVGR 281
Query: 389 KKA 391
K+
Sbjct: 282 AKS 284
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM-DPGCTDHDNYD 972
A+K+ +++AP +L + LKRF+ GR KL+ V + ++++ PY+ D +
Sbjct: 321 ASKQFTVDQAPNVLAVQLKRFAYVPFGR-GKLSHFVEYPLVLDVTPYLSDEDRNSKNRAV 379
Query: 973 YRLVGVVEHLGTM-RGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR 1031
Y L GV+ H G+ GHY +V+ + G W D V VS + VL+
Sbjct: 380 YDLYGVLVHAGSSSNSGHYYCFVK------------TATGTWCEMDDESVSSVSEKTVLK 427
Query: 1032 CEAYILFYEK 1041
+AY+LFY +
Sbjct: 428 QQAYLLFYAR 437
>gi|2580459|gb|AAB82339.1| putative [Mus musculus]
Length = 962
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 419
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 420 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 479 LPLPLKK 485
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 802 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDRSAR 860
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY K + G WY+ D
Sbjct: 861 PYV-----------YDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDD 898
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 899 SSVSLASEDQIVTKAAYVLFYQR 921
>gi|348539075|ref|XP_003457015.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Oreochromis niloticus]
Length = 1629
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAEL-------TFGPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF AE+ T G L I+ L
Sbjct: 743 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRAFEAEINCTNPLGTGGRLAISFAVLLRAL 802
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 803 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 858
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E + F+ +F GQ S + C C S ++PFL L
Sbjct: 859 ETVDSDGRLDEVVAEEAWQRHKMRNDSFIVDLFQGQFKSKLVCPTCSKVSITFDPFLYLP 918
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 919 VPLPQKQ 925
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNY 971
R+A+K++L+ + P +L I LKRFS + K+N V+F + NL + C +
Sbjct: 1365 REASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFP-VRNLD--LSKFCIGQKDE 1421
Query: 972 D-----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y L V+ H G M GGHY AY R P +K +++ VG W D V V
Sbjct: 1422 MQQPPIYDLYAVINHYGGMIGGHYTAYAR-LPSDK-NSQRSDVG--WRLFDDSTVTMVDE 1477
Query: 1027 EEVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1478 SQVVTRYAYVLFYRR 1492
>gi|42542785|gb|AAH66180.1| Usp4 protein, partial [Mus musculus]
gi|45219741|gb|AAH66865.1| Usp4 protein, partial [Mus musculus]
Length = 961
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 302 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 359
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 360 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 418
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 419 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 477
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 478 LPLPLKK 484
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLN-------GHVNFSEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ G +N SE + + R
Sbjct: 801 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVGALNMSEFVCDRSAR 859
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY K + G WY+ D
Sbjct: 860 PYV-----------YDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDD 897
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 898 SSVSLASEDQIVTKAAYVLFYQR 920
>gi|2655204|gb|AAC53587.1| ubiquitin-specific protease [Mus musculus]
Length = 962
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 419
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 420 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 479 LPLPLKK 485
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 802 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDRSAR 860
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY K + G WY+ D
Sbjct: 861 PYV-----------YDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDD 898
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 899 SSVSLASEDQIVTKAAYVLFYQR 921
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDH 968
K+ +TK+ I K P +L +HLKRF A R +K++ +V F ++++ Y ++P +
Sbjct: 391 KQKSTKKFWIQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGP 449
Query: 969 DNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+N Y L VV H G+ G GHY AY AK E G W+H +D V +
Sbjct: 450 ENCLYDLAAVVVHHGSGVGSGHYTAY----------AKHE---GRWFHFNDSTVTLADED 496
Query: 1028 EVLRCEAYILFY 1039
V++ +AYILFY
Sbjct: 497 TVVKAKAYILFY 508
>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
rotundata]
Length = 542
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 139/355 (39%), Gaps = 75/355 (21%)
Query: 105 KAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQ-TRHPLVIQWENPHLRWCFPCNTLI-- 161
K+ W+CL CG CG H ++H + T+H + I EN + +C+ C+ +
Sbjct: 36 KSTWLCLYCGAVHCG-----RYVAGHALKHHEENTQHCVCIDCENLAV-FCYTCDEYVVN 89
Query: 162 -----PVEKT-------EENGENKDALSEVVKLIKGRSTEISSVDVE-DAWFGSGNVNSE 208
+EK +E+ EN++ + E S D + DA + + V
Sbjct: 90 DTTTGQIEKIRRVTFRKDEHKENEENWNTSSSTTPSSMRENSDNDNDADALWKAEVVVRN 149
Query: 209 IKSESTVVSGSDLDGNAC----------------YVVRGLANLGNTCFFNSVMQNLLAMS 252
++ + LDG + V GL NLGNTCF N V+Q+ +S
Sbjct: 150 LRPRTARKRLHSLDGTSGDNRPATKRRSSKITKEKKVVGLRNLGNTCFMNVVLQSFNNIS 209
Query: 253 QLQDY------------------------------FLNAELTFGPLTIALKKLFAETKPE 282
+Y F+N L L L+K+
Sbjct: 210 HFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMNDAL----LAEELRKVLLGLNLG 265
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
I+P F I P+F+GYQQ D+HE L +LD L +E L R E G
Sbjct: 266 GSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPRLG-HEPLG 324
Query: 343 ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQ 397
+ Q V VFGG + S V C+ C S +EPF DLSL +P + K Q
Sbjct: 325 LRGKQS--IVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQ 377
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 39/191 (20%)
Query: 859 TDQDEGSCSVDGATSSGYSAEKVYQSDSQL-VAGNCESEESKVEEINSKIVKVKRDATKR 917
T + E CS+ + S + E++ +DS+L NC K+ +TKR
Sbjct: 374 TKEQEEVCSLTYSLSRFFKVEEL--ADSELYFCDNCMG---------------KQRSTKR 416
Query: 918 VLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-SEIINLRPYMDPGCTD-----HDNY 971
I++ P +L +H+KRF R SK++ V+F + +++ + G T +++
Sbjct: 417 FWIHRLPNVLCLHIKRFRWCNSYR-SKVDTQVDFPMKSLDMSAFTVRGMTGTKLGASNSH 475
Query: 972 DYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
Y L V+ H G+ G GHY A+ G W+H +D VR + + V
Sbjct: 476 LYDLAAVIVHHGSGAGTGHYTAFAVHD-------------GQWFHFNDSSVRPATTDAVA 522
Query: 1031 RCEAYILFYEK 1041
+C+ YILFY +
Sbjct: 523 KCKPYILFYVR 533
>gi|164519045|ref|NP_035808.2| ubiquitin carboxyl-terminal hydrolase 4 [Mus musculus]
gi|342187118|sp|P35123.3|UBP4_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein
gi|26354498|dbj|BAC40877.1| unnamed protein product [Mus musculus]
gi|74140411|dbj|BAE42357.1| unnamed protein product [Mus musculus]
gi|74146936|dbj|BAE25450.1| unnamed protein product [Mus musculus]
gi|74199576|dbj|BAE41468.1| unnamed protein product [Mus musculus]
gi|74211684|dbj|BAE29198.1| unnamed protein product [Mus musculus]
gi|148689335|gb|EDL21282.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b [Mus
musculus]
Length = 962
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 419
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 420 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 479 LPLPLKK 485
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 802 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDRSAR 860
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY K + G WY+ D
Sbjct: 861 PYV-----------YDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDD 898
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 899 SSVSLASEDQIVTKAAYVLFYQR 921
>gi|74142121|dbj|BAE41120.1| unnamed protein product [Mus musculus]
Length = 962
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 419
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 420 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 479 LPLPLKK 485
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 802 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDRSAR 860
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY K + G WY+ D
Sbjct: 861 PYV-----------YDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDD 898
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 899 SSVSLASEDQIVTKAAYVLFYQR 921
>gi|224089911|ref|XP_002308863.1| predicted protein [Populus trichocarpa]
gi|222854839|gb|EEE92386.1| predicted protein [Populus trichocarpa]
Length = 951
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 92/188 (48%), Gaps = 42/188 (22%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF---LNAELTF-------GPLTIA----LKKLF 276
GL NLGNTCF NS +Q L+ S+ YF + E+ + G L +A L++L+
Sbjct: 328 GLQNLGNTCFMNSAIQCLVHTSEFAKYFREDYHQEINWQNPLGMVGELALAFGELLRRLW 387
Query: 277 AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS 336
A R I PR F + APQF GY QHDS ELL LLDGL E+L R ++
Sbjct: 388 APG------RTAIAPRQFKMKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN-RVKHK 439
Query: 337 PSE------------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEP 378
P + N I+ N + VD V GQ ST+ C EC S ++P
Sbjct: 440 PYKKSKDADGRPDEEVADEYWANHIARNDS-IIVD-VCQGQYKSTLVCPECHKISVTFDP 497
Query: 379 FLDLSLPV 386
F+ LSLP+
Sbjct: 498 FMYLSLPL 505
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K +R A+K++ + + P +L IHLKRFS +R KL VNF +L Y+ +
Sbjct: 807 KERRQASKKLDLWRLPEVLVIHLKRFSF-SRSMKHKLETFVNFPIHDFDLTKYI-ANKNN 864
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L + H G M GHY A+++ +N+ WY+ D ++ ++ E
Sbjct: 865 TQRQLYELYALTNHYGGMGSGHYTAHIKLLDENR-----------WYNFDDTHISPINEE 913
Query: 1028 EVLRCEAYILFYEKI 1042
+V AY+LFY ++
Sbjct: 914 DVKSAAAYVLFYRRV 928
>gi|354500406|ref|XP_003512291.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus
griseus]
Length = 1060
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 89/183 (48%), Gaps = 27/183 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 258 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 317
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE-- 339
G I P F + A QF GYQQHDS ELL LLDGL E+L K E
Sbjct: 318 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGL-HEDLNRVKNKEYVELC 376
Query: 340 -GNGI-------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
G G V VD F G ST+ C +CG+ S ++PF LS+P
Sbjct: 377 DGAGRPDLVVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVP 435
Query: 386 VPT 388
+P
Sbjct: 436 LPV 438
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P +L IHLKRFS + +R +L L ++FSE + ++P + +
Sbjct: 783 ATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTLVQFPIRDLDFSEFV-IKPKNE---ST 838
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 839 PDMYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 887
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 888 QIESKAAYVLFYQR 901
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 110 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 165
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 166 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 225
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 226 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 285
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 286 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 318
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 371 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 429
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 430 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 476
Query: 1037 LFY 1039
LFY
Sbjct: 477 LFY 479
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 136/337 (40%), Gaps = 75/337 (22%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPL---------------VIQWEN 148
+K+ WVCL C CG H +H + PL V +
Sbjct: 13 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCS 67
Query: 149 PHLRWCFPCNTLIP-------VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFG 201
+ +C+ C+ + V+K E+ +N + + K R +E
Sbjct: 68 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKL------LE----- 116
Query: 202 SGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 117 ----NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKEL 168
Query: 259 ----LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKA 302
L T G T ++L + F +T G + +P S F +
Sbjct: 169 PAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 228
Query: 303 PQFKGYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFV 352
P F+GYQQ D+HE +R LLD L S ++ ++ S N N V
Sbjct: 229 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 288
Query: 353 DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 289 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 325
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 436
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 437 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 483
Query: 1037 LFY 1039
LFY
Sbjct: 484 LFY 486
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 136/337 (40%), Gaps = 75/337 (22%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPL---------------VIQWEN 148
+K+ WVCL C CG H +H + PL V +
Sbjct: 35 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCS 89
Query: 149 PHLRWCFPCNTLIP-------VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFG 201
+ +C+ C+ + V+K E+ +N + + K R +E
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKL------LE----- 138
Query: 202 SGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 ----NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKEL 190
Query: 259 ----LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKA 302
L T G T ++L + F +T G + +P S F +
Sbjct: 191 PAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 250
Query: 303 PQFKGYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFV 352
P F+GYQQ D+HE +R LLD L S ++ ++ S N N V
Sbjct: 251 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 310
Query: 353 DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|170097329|ref|XP_001879884.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645287|gb|EDR09535.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1126
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 80/180 (44%), Gaps = 47/180 (26%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRL-------SKLNGHVNFSEIINLRPYMD 962
+ R A KR LI PP+L +HLKRF Q A+ L KL+ +V F E ++L P++
Sbjct: 947 IMRPAYKRYLIATPPPVLVVHLKRFQQIAKTHLISFSHGFKKLDDYVTFPEYLDLAPFLA 1006
Query: 963 PGCTDH-------DNYD-----------YRLVGVVEHLGTMRGGHYVAYV---------- 994
P D+ D D YRL VV H+G M GGHYV+Y
Sbjct: 1007 PRKEDYGLGKRRKDRIDGKRGKGEERCMYRLYAVVVHIGNMLGGHYVSYTALPSQSPGAD 1066
Query: 995 --RGGPKNKVKAKKESVGGV----------WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
R N ++ S W + SD VR +LEEVL +AYI YE++
Sbjct: 1067 SPRRTESNTMENSATSKSAQSKPGHERERQWAYISDTTVRLTTLEEVLHAKAYICMYERV 1126
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 102/253 (40%), Gaps = 68/253 (26%)
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLAMSQLQD--YFL------------------NAELTF 265
Y+ GL N GNTCF NSV+Q L+A L D +F + +LT
Sbjct: 26 AYLPPGLINHGNTCFMNSVLQGLIATHLLNDLVHFTPIPPSVQRFSSTPLASRRSPQLTN 85
Query: 266 GP--------------------LTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQF 305
G L++ K A+ + + R V++PRS G + K Q+
Sbjct: 86 GHHLSEEWDKPWVNSMPIGDMFLSLMYKSWEAQARRQ---REVLSPRSVLGTLGQKYDQY 142
Query: 306 KGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPV--------------- 350
+ Q D+HE LR +LD + EE K+ P + P
Sbjct: 143 LDFAQQDAHEFLRIILDAMRMEEQDIIKKRQPPPKKRRRTTLTPADSNAPLSPPPPPSPI 202
Query: 351 ---------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV-PTKKAPSKKTQPAS 400
FVD +FGGQ+ S + C +C H S YE F D+SL + P A K+ + +
Sbjct: 203 LNEEDKLISFVDMIFGGQLTSILVCQKCKHISQTYEDFNDISLSIKPEDYAHRKRDRLKN 262
Query: 401 RAKKTKLPPKKSG 413
AK+ P SG
Sbjct: 263 FAKRLTTFPSSSG 275
>gi|4115923|gb|AAD03434.1| contains similarity to ubiquitin carboxyl-terminal hydrolase family
2 (Pfam:PF00443, score=40.0, E=5.2e-08, N=1) and
(Pfam:PF00442, Score=37.9 E=5.3e-10, N=1) [Arabidopsis
thaliana]
Length = 887
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 94/204 (46%), Gaps = 52/204 (25%)
Query: 229 VRGLANLGNTCFFNSVMQNL-----LAMSQLQDY-----------------FLNAELT-- 264
+ GL+NLGNTCF NS +Q L + LQDY +LN T
Sbjct: 324 LAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCVSACYLNLLFTHV 383
Query: 265 FGPLTIA----LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
G L IA LKKL++ RN + PR+F + APQF GY QHDS ELL L
Sbjct: 384 MGELAIAFGDLLKKLWSSG------RNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFL 437
Query: 321 LDGLCSEELAFRKRNSPSE----------------GNGISSNQGPVFVDYVFGGQIASTV 364
LDGL E+L KR E N + V VD V GQ ST+
Sbjct: 438 LDGL-HEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVD-VCQGQYKSTL 495
Query: 365 RCVECGHSSTVYEPFLDLSLPVPT 388
C CG S ++PF+ LS+P+P+
Sbjct: 496 VCPACGKISITFDPFMYLSVPLPS 519
Score = 43.1 bits (100), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ +
Sbjct: 801 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYLKNKIDTFVNFPVHDLDLSKYVK--NKN 857
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
+Y Y L V H G + GGHY AY +
Sbjct: 858 DQSYLYELYAVSNHYGGLGGGHYTAYAK 885
>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
Length = 537
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 33/194 (17%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF 265
NS + S+ V+GS GL NLGNTCF N+++Q+L ++ + F
Sbjct: 187 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLRSLVE----------EF 232
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL- 324
AL + G + +P S F + P F+GYQQ D+HE +R LLD L
Sbjct: 233 RKTLCALWQ---------GSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 283
Query: 325 ---------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTV 375
S ++ +S S N N V +FGG + + V C+ CG S
Sbjct: 284 LELQGGFNGVSRSAMLQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRK 343
Query: 376 YEPFLDLSLPVPTK 389
++PFLDLSL +P++
Sbjct: 344 FDPFLDLSLDIPSQ 357
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 417 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 475
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 476 VVVHHGSGVGSGHYTAY----------AVHE---GRWFHFNDSTVTLTDEETVGKAKAYI 522
Query: 1037 LFY 1039
LFY
Sbjct: 523 LFY 525
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 109 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 164
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 165 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 224
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 225 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 284
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 285 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 317
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 370 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 428
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 429 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 475
Query: 1037 LFY 1039
LFY
Sbjct: 476 LFY 478
>gi|321460368|gb|EFX71411.1| hypothetical protein DAPPUDRAFT_308900 [Daphnia pulex]
Length = 869
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 91/196 (46%), Gaps = 49/196 (25%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPL--TIALKKLFAETKPE- 282
GL NLGNTCF NSV+Q + +Q YFL AEL PL + K FA+
Sbjct: 251 GLNNLGNTCFMNSVLQCMSNTPPIQRYFLEERHWAELNKENPLGNQGEIAKAFADLLKAM 310
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL----------------- 324
+G + PR+F + APQF GYQQHDS ELL LLDGL
Sbjct: 311 WSGQHHSFPPRAFKLQVGRFAPQFSGYQQHDSQELLTFLLDGLHEDLNRILKKPYIELKD 370
Query: 325 ----CSEELA------FRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSST 374
EE+A +RKRN V VD +F G + ST+ C EC S
Sbjct: 371 ADGRSDEEVAREGWENYRKRND------------SVIVD-LFHGLLKSTLVCPECNKVSV 417
Query: 375 VYEPFLDLSLPVPTKK 390
++P LSLP+P KK
Sbjct: 418 TFDPTCYLSLPMPVKK 433
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-SEIINLRPYM-DPGCTDHDNY 971
ATK+ + P +L IHLKRFS R KL+ V F + +N+ PY+ DP D
Sbjct: 712 ATKKFDLWSLPEVLVIHLKRFSY-TRSLRDKLDTLVEFPTRGLNMAPYIIDPNPMDAV-- 768
Query: 972 DYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR 1031
Y L+GV H G + GGHY AY KNK G WY+ D V E S + V
Sbjct: 769 -YDLIGVCNHYGGLGGGHYTAYA----KNK-------DDGSWYYFDDSSVSESSEDSVCS 816
Query: 1032 CEAYILFY 1039
AY+LFY
Sbjct: 817 KAAYVLFY 824
>gi|358333828|dbj|GAA52307.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Clonorchis sinensis]
Length = 883
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 101/213 (47%), Gaps = 40/213 (18%)
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
+G GN ++ + S + G V GL+NLGNTCF NS +Q L + L YFL
Sbjct: 246 YGFGNWLPQLTNGSKQLRG----------VCGLSNLGNTCFMNSAIQCLSNVPDLTRYFL 295
Query: 260 ----------NAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
N T G + A +L + +GL + PR+ I + A QF GY
Sbjct: 296 GNWKVDINKYNPLGTQGRIATAYAELIG--RMWSGLYSYDVPRTLKREIAAIANQFYGYA 353
Query: 310 QHDSHELLRCLLDGLCSE--------ELAFRKR-NSPSE-------GNGISSNQGPVFVD 353
QHDSHELL LLDGL + + ++ + P E GN + N V VD
Sbjct: 354 QHDSHELLMFLLDGLHEDLNKVIDKPYIQYKDAGDRPDEVVATEAWGNHKARNDS-VIVD 412
Query: 354 YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
Y F GQ+ STV C +C S ++PF LSLP+
Sbjct: 413 Y-FHGQLKSTVVCPDCNERSVTFDPFASLSLPL 444
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 15/134 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K ++ ATK+ + P +L I LKRF R R K++ V F + ++L P++ +
Sbjct: 702 KKEKQATKKFDLWSLPKVLIIQLKRFRSTFRSR-DKIDSFVEFPVKGLDLTPWVLRDTKE 760
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
YD L+GV H+G + GGHY AY P WY D R+V
Sbjct: 761 QFIYD--LLGVSNHMGYLGGGHYTAYALNEPTQ-----------TWYLFDDASTRKVDES 807
Query: 1028 EVLRCEAYILFYEK 1041
++ Y+L Y +
Sbjct: 808 HIVSSAGYVLVYRR 821
>gi|351699503|gb|EHB02422.1| Ubiquitin carboxyl-terminal hydrolase 11, partial [Heterocephalus
glaber]
Length = 911
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 91/182 (50%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L ++ QL +YFL+ EL F PL + L + +A+ +T
Sbjct: 256 GLTNLGNTCFMNSTLQCLSSVPQLTEYFLDNRYLEELNFCNPLGMKGELAEAYADLVKQT 315
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
G + P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 316 WSGCHRSVVPNVFKNKVSHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 375
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 376 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 434
Query: 387 PT 388
P
Sbjct: 435 PV 436
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 29/138 (21%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH----- 968
ATK++ + P IL IHLKRFS ++ KL+ V+F P D +D
Sbjct: 760 ATKKLDLWMLPEILIIHLKRFSF-SKFSHEKLDTLVHF-------PIRDLDFSDFVIKPQ 811
Query: 969 -----DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVRE 1023
+ Y Y L+ V H G +R GHY + K+S G W++ D V
Sbjct: 812 NESAPELYKYDLIAVSNHYGGIRDGHYTTFA---------CNKDS--GQWHYFDDSSVSP 860
Query: 1024 VSLEEVLRCEAYILFYEK 1041
V+ ++ AY+LFY++
Sbjct: 861 VNENQIESKAAYVLFYQR 878
>gi|145547132|ref|XP_001459248.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427072|emb|CAK91851.1| unnamed protein product [Paramecium tetraurelia]
Length = 1050
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFA 277
+ GLANLGNTCF NS Q L QL +YF+ + T G L L
Sbjct: 381 IAGLANLGNTCFMNSGTQCLSNTYQLSEYFITNKYFDEINEDNPLGTKGQLVRKYASLIK 440
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
K G +N++ P SF + P FKG+QQHDS EL+ LLDGL E+L R + P
Sbjct: 441 --KLWCGHKNIVIPTSFKKAVGQFQPMFKGFQQHDSSELITFLLDGL-HEDLN-RVKKKP 496
Query: 338 ------------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
S N ++ NQ + VD + GQ ST++C C S ++PF
Sbjct: 497 YVESKDNQGKPDFEVAKESWDNHLARNQS-IIVD-LMHGQYKSTLKCPTCSQISITFDPF 554
Query: 380 LDLSLPVPTKKAPS 393
L L +P KK S
Sbjct: 555 LTCGLSIPNKKQKS 568
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 63/160 (39%), Gaps = 35/160 (21%)
Query: 906 KIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF--------SEIINL 957
K+ K A K + I KA IL LKRF + KL V F I+N
Sbjct: 888 KVCKEHVQAYKSMQIYKASDILIFTLKRFKASSGFFKQKLETFVEFPVRGLDLTDFILNK 947
Query: 958 -RPY-MDPGCTDHDNYD--------------YRLVGVVEHLGTMRGGHYVAYVRGGPKNK 1001
RP + D + + Y L V H G M GGHY A+
Sbjct: 948 NRPLDYEQEVKDQEKIEEEFQEQNEGNKKLIYDLFAVSNHFGGMGGGHYTAF-------- 999
Query: 1002 VKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
K + G WY+ D V EV ++V+ AY+LFY++
Sbjct: 1000 ---GKNHLNGKWYNFDDAQVGEVDEDQVVTKSAYVLFYKR 1036
>gi|223647442|gb|ACN10479.1| Ubiquitin carboxyl-terminal hydrolase 4 [Salmo salar]
Length = 1005
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 106/214 (49%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPET 283
GL+NLGNTCF NS +Q L S L +YFL+ AE+ PL + + + +A+ +
Sbjct: 321 GLSNLGNTCFMNSALQCLSNASPLTEYFLDDQYEAEINRENPLGMRGEIAESYADLVKQM 380
Query: 284 GLR--NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------N 335
L + + PR+F + APQF GYQQ DS ELL L+DGL + +K+ +
Sbjct: 381 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLMDGLHEDLNRVKKKPYLALQD 440
Query: 336 SPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ + I + + + VD +F G ST+ C EC S ++PF L+LP+
Sbjct: 441 AGGRKDEIVAKEAWTNHRLRNDSIIVD-IFHGLFKSTLVCPECAKVSVTFDPFCYLTLPL 499
Query: 387 PTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
P KK + + P SR + ++ K G +
Sbjct: 500 PMKKDRTMEVFLVRIDPQSRPTQYRVVVPKLGSV 533
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V+F +N+ ++ DP
Sbjct: 855 KKHQQATKKFDLWSLPRILVVHLKRFSYNRCWR-DKLDTVVDFPVRDLNMSEFVCDPKAG 913
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GGHY AY KNK K W++ D V S
Sbjct: 914 P---YVYDLIAVSNHYGGMGGGHYTAY----GKNKADGK-------WHYFDDSSVSAASE 959
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 960 DQIVTKAAYVLFYQR 974
>gi|60360166|dbj|BAD90302.1| mKIAA4155 protein [Mus musculus]
Length = 747
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 316 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 373
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 374 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 432
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 433 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 491
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 492 LPLPLKK 498
>gi|322786710|gb|EFZ13080.1| hypothetical protein SINV_10721 [Solenopsis invicta]
Length = 891
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 9/134 (6%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINK 922
EG CSV+ + ++A ++ +++V C + E K +E SK++ +TK+ LI++
Sbjct: 708 EGECSVESCLNQ-FTALELMTGSNKVVCEACTAREKKNQEGTSKMICT--SSTKQYLISQ 764
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-YRLVGVVEH 981
PPIL +HLKRF Q R K+ HV+F +++L P CTDH Y L GVVEH
Sbjct: 765 VPPILILHLKRF-QTQRVGFRKVVKHVSFPILLDLAPV----CTDHKKPRLYALYGVVEH 819
Query: 982 LGTMRGGHYVAYVR 995
GT+ GGHYVAYV+
Sbjct: 820 SGTVHGGHYVAYVK 833
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 140/352 (39%), Gaps = 94/352 (26%)
Query: 105 KAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVI---QWENPHLRWCFPCN 158
K +W+CL CG CG + H V H R+ H +V W WC+ C
Sbjct: 78 KPLWICLQCGEQGCG-----KEQKQHAVEHYRKPHSDCHCMVTDSHHWS----VWCYQC- 127
Query: 159 TLIPVEKTEENGENKDALSEVVKLIK--------GRSTEISSVDVEDAWFGSGNVNSEIK 210
+ E + ++ L E V+ +K + ++ ++ + V+ + K
Sbjct: 128 ------EIEVHANSRKKLLETVEFVKKCVNIPQISQQPKMPAIQCQKEMI----VDVQEK 177
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNL----LAMSQLQDYFL------- 259
+ ++ N V GLANLGNTCFFN+V+Q L + L+D L
Sbjct: 178 EKHKML-------NNLPKVGGLANLGNTCFFNAVLQCLAQTPYLVKVLEDLRLPGKKFVF 230
Query: 260 ----------NAELTFGPLTIALKK------LFAETKPE---TGLRNVINPRSFFGCICS 300
E+ P+ L++ + ET + T P + +
Sbjct: 231 PGGKHKPIDAEEEVELPPIEGTLERWGSFTSILCETLSKMQNTNGHQTYTPLNLLCKLRK 290
Query: 301 KAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFV-------- 352
K Q QHDSHE LR LL+ + +E+L R ++ + G+S P V
Sbjct: 291 KTTQCVDGGQHDSHEFLRHLLEIVRNEDLR-RYQSIILKEVGLSGKTKPECVEKGLKSRV 349
Query: 353 --------------DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
+ VF G + ST+ C++C HSS EPFLDLS+PV K
Sbjct: 350 KFYGNQANMRLLGPEAVFRGVLVSTLECLDCHHSSQRTEPFLDLSVPVTADK 401
>gi|392891842|ref|NP_001254304.1| Protein F07A11.4, isoform a [Caenorhabditis elegans]
gi|3875534|emb|CAA91317.1| Protein F07A11.4, isoform a [Caenorhabditis elegans]
Length = 1095
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 87/187 (46%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----FGPLTIA--LKKLFAETKPE- 282
GL N+GNTCF N+V+Q L+ +L++YFL PL L K FA+ +
Sbjct: 424 GLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMHQM 483
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG- 340
+G + I P + KA QF + QHD+HE L LLDGL E R + P G
Sbjct: 484 WSGHQKAIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGL--HEDVNRVKKKPLTGT 541
Query: 341 -----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
N I N +FVD +F GQ+ S V+C C S ++PF+ L
Sbjct: 542 VESHGRHDLDVSNEAWKNHILRNDS-IFVD-LFHGQLKSHVQCPNCDRVSITFDPFVYLP 599
Query: 384 LPVPTKK 390
+P P K
Sbjct: 600 VPFPKNK 606
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 886 SQLVAGNCESEESKVEE-INSKIVKVKRDATKRVLINKAPPILTIHLKRF------SQDA 938
+Q++ E+E K EE K +ATK++ + + PP+L I LKRF Q +
Sbjct: 911 TQMLDLFSETERLKPEESWYCSTCKENVEATKKLQLYRLPPVLIIQLKRFVYTAFTYQSS 970
Query: 939 RGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGG 997
R SK V + E +++ P++ ++ Y L GVV H G GHY++ R
Sbjct: 971 MARRSKDTRSVEYPLESLDMSPFLAETSPHPNSTMYDLTGVVCHSGNSYFGHYISMGRLA 1030
Query: 998 PKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYE 1040
+ K K E W + D V S + +AY+LFY+
Sbjct: 1031 DFDSSKTKIE-----WRNFDDSTVARQSTSTLQTEDAYLLFYK 1068
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 117 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 172
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 173 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 232
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 233 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 292
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 293 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 325
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 436
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 437 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 483
Query: 1037 LFY 1039
LFY
Sbjct: 484 LFY 486
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P L +HLKRF A R +K++ +V F ++++ Y ++P + D+ Y L
Sbjct: 400 IQKLPKALCLHLKRFHWTAYLR-NKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------AVHE---GRWFHFNDSTVTVTDEETVGKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 117 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 172
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 173 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 232
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 233 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 292
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 293 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 325
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 436
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 437 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 483
Query: 1037 LFY 1039
LFY
Sbjct: 484 LFY 486
>gi|15030172|gb|AAH11341.1| Usp4 protein [Mus musculus]
Length = 915
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 314 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 372
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 373 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 432 LPLPLKK 438
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 755 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDRSAR 813
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY K + G WY+ D
Sbjct: 814 PYV-----------YDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDD 851
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 852 SSVSLASEDQIVTKAAYVLFYQR 874
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|307211269|gb|EFN87455.1| Ubiquitin carboxyl-terminal hydrolase 2 [Harpegnathos saltator]
Length = 342
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 90/193 (46%), Gaps = 24/193 (12%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y LN + T + AL K F++ E
Sbjct: 2 LNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHE 61
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G +V+N S I AP+F GY Q D+ E LR LL+GL + + P
Sbjct: 62 LWEVGGDHVVNTTSLKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIH 121
Query: 340 GN---GISSNQGPV------------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
G+ + Q V V VF GQ+ S++ C C H S +PF DLSL
Sbjct: 122 GDIPDSYTETQKAVESWKRYLRSEDSMVVDVFVGQLRSSLHCTSCDHVSVTLDPFWDLSL 181
Query: 385 PVPTKKAPSKKTQ 397
P+P + K +Q
Sbjct: 182 PIPARSGTVKLSQ 194
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 89/220 (40%), Gaps = 47/220 (21%)
Query: 836 INDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSG----------YSAEKVYQSD 885
+ D Q RSS SC S+T S+ SG ++ E+V D
Sbjct: 149 VVDVFVGQLRSSLHCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGD 208
Query: 886 SQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+ C+ ++R TK I K P IL IHLKRFS R R KL
Sbjct: 209 EKPTCSKCQ---------------MRRKCTKSFSIQKFPKILVIHLKRFSPMERFR-GKL 252
Query: 946 NGHVNFSEI-INLRPYMDP---GCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK 1001
N V+F ++L + P GCT Y L GV H GT GHY AY
Sbjct: 253 NVMVDFPLTGLDLSAFAAPKVPGCT------YNLYGVANHSGTTYSGHYTAYC------- 299
Query: 1002 VKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
K G W+ +D V VS V+ EAY+LFYE+
Sbjct: 300 ----KHPYSGEWHEYNDSRVSVVSARSVVSSEAYVLFYEQ 335
>gi|301614079|ref|XP_002936516.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Xenopus (Silurana) tropicalis]
Length = 933
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL+NLGNTCF NS +Q L L YF+ E G + +A +L +
Sbjct: 278 GLSNLGNTCFMNSALQCLSNTPPLTRYFVTDEYKKEINRENPLGMKGEIAVAYAELIRQI 337
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR----- 334
+G + + PR F + APQF GYQQ DS ELL LLDGL + +K+
Sbjct: 338 W--SGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLEL 395
Query: 335 -----------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ + N + N + VD +F G ST+ C EC S ++PF L+
Sbjct: 396 KDANGRPDSVVAAEAWENHLRRNNS-IIVD-IFHGLFKSTLVCPECSKVSVTFDPFCYLT 453
Query: 384 LPVPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
LP+P KK + ++ P + K+ ++ K G +
Sbjct: 454 LPLPMKKDRTMEVFFVRSDPHCKPKQYRVTVPKMGVV 490
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 778 KKHQRATKKFDLWSLPKILVVHLKRFSYNRFWR-DKLDAVVEFPIRDLNMSDFVCDPQAG 836
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y LV V H G M GGHY AY + K G WY+ D V S
Sbjct: 837 P---YVYDLVAVSNHYGGMGGGHYTAYAKNQDK-----------GQWYYFDDSSVSPASE 882
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 883 DQIVTKAAYVLFYQR 897
>gi|301614077|ref|XP_002936515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Xenopus (Silurana) tropicalis]
Length = 975
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL+NLGNTCF NS +Q L L YF+ E G + +A +L +
Sbjct: 320 GLSNLGNTCFMNSALQCLSNTPPLTRYFVTDEYKKEINRENPLGMKGEIAVAYAELIRQI 379
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR----- 334
+G + + PR F + APQF GYQQ DS ELL LLDGL + +K+
Sbjct: 380 W--SGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLEL 437
Query: 335 -----------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ + N + N + VD +F G ST+ C EC S ++PF L+
Sbjct: 438 KDANGRPDSVVAAEAWENHLRRNNS-IIVD-IFHGLFKSTLVCPECSKVSVTFDPFCYLT 495
Query: 384 LPVPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
LP+P KK + ++ P + K+ ++ K G +
Sbjct: 496 LPLPMKKDRTMEVFFVRSDPHCKPKQYRVTVPKMGVV 532
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 820 KKHQRATKKFDLWSLPKILVVHLKRFSYNRFWR-DKLDAVVEFPIRDLNMSDFVCDPQAG 878
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y LV V H G M GGHY AY + K G WY+ D V S
Sbjct: 879 P---YVYDLVAVSNHYGGMGGGHYTAYAKNQDK-----------GQWYYFDDSSVSPASE 924
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 925 DQIVTKAAYVLFYQR 939
>gi|148689334|gb|EDL21281.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a [Mus
musculus]
Length = 915
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 314 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 372
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 373 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 432 LPLPLKK 438
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 755 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDRSAR 813
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY K + G WY+ D
Sbjct: 814 PYV-----------YDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDD 851
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 852 SSVSLASEDQIVTKAAYVLFYQR 874
>gi|393231605|gb|EJD39196.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Auricularia
delicata TFB-10046 SS5]
Length = 950
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 36/205 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQ----DYFLNAELTFGPL----------TIALKKLF 276
GL NLGN+CFFNSV Q+L+A ++ D N + + P + + F
Sbjct: 28 GLYNLGNSCFFNSVFQSLVATRTIERLVHDPAHNPDASRSPALASHQGDPDRRLPITSTF 87
Query: 277 ------AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELA 330
A + LR ++ R + K Q+ ++Q D+HELLR LLD + SEE
Sbjct: 88 LRAAENAWAAQDKRLRQPLSLRELLMRLGHKYDQYLDFRQQDAHELLRHLLDAISSEESD 147
Query: 331 FRKRNSPSEGNGISSNQGP--------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ +P ++ P F+D VFGG +AS + C +C H S YEPF DL
Sbjct: 148 IIREANPRPKKRRRTSADPDEDAAGPASFIDIVFGGTLASVLVCADCKHVSVNYEPFNDL 207
Query: 383 SLPVPTKKAPSKKTQPASRAKKTKL 407
SL S +T+P K+ K
Sbjct: 208 SL--------SLRTEPGRERKRDKF 224
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 942 LSKLNGHVNFSEIINLRPYMDPGCTD--------HDNYDYRLVGVVEHLGTMRGGHYVAY 993
K++ + F E ++L P++ P D DYRL VV H+G M GGHYVAY
Sbjct: 787 FRKVDEWIEFPETLDLAPFVAPRRADLREGRGAKGGRMDYRLYAVVVHIGNMLGGHYVAY 846
Query: 994 V 994
Sbjct: 847 T 847
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGFLQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDIYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEDTVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 50 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 105
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 106 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 165
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 166 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 225
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 226 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 258
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 311 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 369
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 370 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 416
Query: 1037 LFY 1039
LFY
Sbjct: 417 LFY 419
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 117 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 172
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 173 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 232
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 233 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 292
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 293 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 325
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 436
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 437 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 483
Query: 1037 LFY 1039
LFY
Sbjct: 484 LFY 486
>gi|301770377|ref|XP_002920614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Ailuropoda
melanoleuca]
Length = 1000
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 339 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 396
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 397 QMWSGRDSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 454
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 455 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 513
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 514 TLPLPLKK 521
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 839 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 897
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PYM Y L+ V H G M GHY AY KNKV K WY+ D
Sbjct: 898 PYM-----------YDLIAVSNHYGAMGVGHYTAYA----KNKVNGK-------WYYFDD 935
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 936 SSVSLASEDQIVTKAAYVLFYQR 958
>gi|145546913|ref|XP_001459139.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426962|emb|CAK91742.1| unnamed protein product [Paramecium tetraurelia]
Length = 1025
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 127/287 (44%), Gaps = 50/287 (17%)
Query: 142 LVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFG 201
LVI+++ + WC T +PVE E N L+ + K S + D F
Sbjct: 288 LVIEFQQYNRPWCIRHPT-VPVEGKCEGCCNITVLN-FPCVCKKVSYCTEQCKINDERFH 345
Query: 202 SGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-- 259
+ + S+ V + N+ + GL+NLGNTCF NS Q L L++YF+
Sbjct: 346 LAKCD-RLGSDDEQVKSMNYSDNSIKGIAGLSNLGNTCFMNSGTQCLSNTYPLKEYFISN 404
Query: 260 --------------NAELT--FGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAP 303
N +L FG L LKKL+ G +NV+ P SF + P
Sbjct: 405 KYFEEINEDNPLGTNGQLVRKFGSL---LKKLWC------GDKNVVIPTSFKKAVGQFQP 455
Query: 304 QFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG-----------------NGISSN 346
FKG+QQHDS EL+ LLDGL E+L K+ E N ++ N
Sbjct: 456 MFKGFQQHDSSELITFLLDGL-HEDLNRVKKKPYVESKDYQGRPDVEVAKESWENHLARN 514
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS 393
Q + VD + GQ ST++C C S ++PFL + L +P KK S
Sbjct: 515 QS-IIVD-LMHGQYKSTLKCPTCQQISITFDPFLTVGLGIPNKKQKS 559
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 20/145 (13%)
Query: 906 KIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII--N 956
K+ K A K + I KA IL LKRF KL V F +E I
Sbjct: 875 KVCKEHVQAYKSMQIYKASDILIFTLKRFKASHGFFKQKLETFVEFPVQGLDLTEFILNK 934
Query: 957 LRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHA 1016
+P + + Y L V H G M GGHY AY + G WY
Sbjct: 935 NKPNENQIQEEQKKLIYDLYAVSNHFGGMGGGHYTAYAKNHE-----------NGKWYDF 983
Query: 1017 SDVYVREVSLEEVLRCEAYILFYEK 1041
D E++ ++++ AY+LFY++
Sbjct: 984 DDSQASEINEDQIVSQSAYVLFYKR 1008
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 50 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 105
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 106 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 165
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 166 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 225
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 226 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 258
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 311 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 369
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 370 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 416
Query: 1037 LFY 1039
LFY
Sbjct: 417 LFY 419
>gi|449507201|ref|XP_004162960.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 9-like [Cucumis sativus]
Length = 915
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 104/226 (46%), Gaps = 34/226 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFG---PLTIALKKLFAETK 280
GL NLGNTCF NS +Q L+ L +YFL NAE G L IA +L K
Sbjct: 321 GLQNLGNTCFMNSALQCLVHTPPLVEYFLQDYSEEINAENPLGMHGELAIAFGELL--RK 378
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
+G + I PR F G + APQF GY QHDS ELL LLDGL E+L KR E
Sbjct: 379 LWSG-QTTIAPRVFKGKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNRVKRKPYFET 436
Query: 341 NGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ + VD V GQ ST+ C C S ++PF+ LSL
Sbjct: 437 KDSDGRPDVEVADECWRYHKARNDSLIVD-VCQGQYKSTLVCPVCEKISITFDPFMYLSL 495
Query: 385 PVPTKKAPSKKTQPASRAKKTKLPPKKSGRIRAKG-TKD-THAVTT 428
P+P+ T + LP + ++ G TKD THA+ T
Sbjct: 496 PLPSTVT-RSVTVTVFYGDGSGLPMPYTVTVQRHGCTKDLTHALAT 540
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K R ATK++ + K P I+ HLKRFS +R +KL+ V+F I NL D
Sbjct: 793 KEHRQATKKLDLWKLPEIIVFHLKRFSY-SRYLKNKLDTFVDFP-IHNLDLSKYVKSNDG 850
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
+Y Y L + H G + GGHY AY + + K+ WYH D V V EE
Sbjct: 851 KSYLYNLYAISNHYGGLGGGHYTAYAK-----LIDEKR------WYHFDDSQVSPVGEEE 899
Query: 1029 VLRCEAYILFYEKI 1042
+ AY+LFY+++
Sbjct: 900 IKTSAAYLLFYQRV 913
>gi|414877602|tpg|DAA54733.1| TPA: hypothetical protein ZEAMMB73_341521 [Zea mays]
Length = 888
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 92/194 (47%), Gaps = 46/194 (23%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAELT--FGPLTIA 271
+ GL NLGNTCF NS +Q L S+L DYFL EL FG L
Sbjct: 273 LTGLDNLGNTCFMNSAVQCLAHTSKLVDYFLGDFHKEVNPHNPLGMKGELAYAFGDL--- 329
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+KL+A R + PR F + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 330 LRKLWAID------RTPVAPRQFKARLGRFAPQFSGFNQHDSQELLAFLLDGL-HEDLNR 382
Query: 332 RKRNSPSE-----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSST 374
K SE GN ++ N + VD + GQ ST+ C C S
Sbjct: 383 VKCKPYSEAKDSDGRPDEEVADEYWGNHLARNDS-IIVD-ICQGQYKSTLVCPICKKVSV 440
Query: 375 VYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 441 TFDPFMYLSLPLPS 454
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A+K++ + + P IL IHLKRFS +R +KL V+F ++L Y+ C D
Sbjct: 750 KEHRQASKKLDLWRLPEILIIHLKRFSY-SRYTKNKLETFVDFPIHDLDLSKYIGHRCQD 808
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++YRL H G++ GGHY AYV K WY D +V ++ +
Sbjct: 809 VP-HNYRLYATSNHYGSLGGGHYTAYVYHEGKKG-----------WYDFDDRHVGPITED 856
Query: 1028 EVLRCEAYILFYEKI 1042
+ AY+LFY +I
Sbjct: 857 SIKTSAAYVLFYRRI 871
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|332266327|ref|XP_003282162.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Nomascus
leucogenys]
Length = 711
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + + E+
Sbjct: 249 CLSCVFFGC-------FTEKHIHKHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 300
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--STVVSGSDLDGNACY 227
K+ ++++L+ ST++S + F E K + V + Y
Sbjct: 301 A--KETKEKILRLLTSTSTDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRKKSVY 358
Query: 228 VV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
V RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 359 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 418
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 419 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 468
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
G +N +D +F G + S V C C ST +P D+SL +P
Sbjct: 469 SGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLP 519
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--------MDP 963
+++TK++ + K P + HLKRF + R K+N ++F +++ P+ M
Sbjct: 577 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKDSRMKE 635
Query: 964 G-----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
G C ++N Y L V+ H GT+ GHY +++R +K+ W+ D
Sbjct: 636 GQPPTDCVPNEN-KYSLFAVINHHGTLESGHYTSFIR--------QQKDQ----WFSCDD 682
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 683 AIITKATIEDLLYSEGYLLFYHK 705
>gi|281338350|gb|EFB13934.1| hypothetical protein PANDA_009352 [Ailuropoda melanoleuca]
Length = 962
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 301 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 358
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 359 QMWSGRDSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 416
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 417 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 475
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 476 TLPLPLKK 483
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 801 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 859
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PYM Y L+ V H G M GHY AY KNKV K WY+ D
Sbjct: 860 PYM-----------YDLIAVSNHYGAMGVGHYTAYA----KNKVNGK-------WYYFDD 897
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 898 SSVSLASEDQIVTKAAYVLFYQR 920
>gi|124001149|ref|XP_001276995.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121918981|gb|EAY23747.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 777
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 95/203 (46%), Gaps = 41/203 (20%)
Query: 232 LANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAETK 280
L N+GNTCF NS +Q L+ + L +YF N T G L+IA KL +
Sbjct: 218 LNNMGNTCFMNSTLQCLMHIELLANYFANTPWQKEISTTNPLGTKGELSIAFSKLLEIS- 276
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS-- 338
+ G + P I AP F GY Q D+HE+L +LDG+ E+L R P
Sbjct: 277 -QRGSHSSYTPSEVRKAIIKHAPNFDGYSQQDAHEVLLFILDGI-HEDLN-RITKKPQVD 333
Query: 339 --EGNGISSNQGPV-------------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
EG+G + N+ + VD +F GQ+ S ++C C + ++PF+ LS
Sbjct: 334 VVEGDGTNDNETAIKAWHAYKQRNDSIIVD-LFHGQLRSHLKCPNCQADTVAFDPFVSLS 392
Query: 384 LPVPTKKA--------PSKKTQP 398
+PVP KK P+ TQP
Sbjct: 393 VPVPQKKILSPAFIFCPADPTQP 415
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM----DPGCTDHD 969
A+K++ I +P IL IHLKRF+Q + G L+K V + + +++ + + C
Sbjct: 663 ASKKMDIWTSPEILIIHLKRFAQIS-GFLTKNETEVQYPDELDMSQRIIGPHNGSC---- 717
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
Y+L+ V EH G + GHY A+ VG WY +D V + +
Sbjct: 718 --KYKLIAVSEHHGILGSGHYTAHAM-------------VGNQWYLFNDSSVSKCLRDMA 762
Query: 1030 LRCEAYILFYEKI 1042
AY+LFY KI
Sbjct: 763 HTKAAYVLFYAKI 775
>gi|196005611|ref|XP_002112672.1| hypothetical protein TRIADDRAFT_56945 [Trichoplax adhaerens]
gi|190584713|gb|EDV24782.1| hypothetical protein TRIADDRAFT_56945 [Trichoplax adhaerens]
Length = 930
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 89/194 (45%), Gaps = 33/194 (17%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFA 277
+ GL NLGNTCF NS++Q + L+D+FL +L + G + A L
Sbjct: 370 MTGLNNLGNTCFMNSILQCMSNTRPLRDFFLECDLRNEINYDNPLGSKGAIVAAFAVLIR 429
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
G + +P + +KA QF GY Q D+ E + LLDGL E+L R RN P
Sbjct: 430 TL--WCGKYHSYSPSKLKSLVAAKATQFMGYAQQDAQEFMAYLLDGL-HEDLN-RVRNKP 485
Query: 338 ----SEGNGISSNQ-------------GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
EG G + + VDY FG Q S + C EC ST ++PF+
Sbjct: 486 LTQVVEGAGRPDEEVANEAWMVHRKRNDSLIVDYFFG-QFKSVLICPECDKKSTTFDPFM 544
Query: 381 DLSLPVPTKKAPSK 394
L LP+P K P K
Sbjct: 545 VLPLPIPAVKVPIK 558
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 136/337 (40%), Gaps = 75/337 (22%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPL---------------VIQWEN 148
+K+ WVCL C CG H +H + PL V +
Sbjct: 35 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQTPLTNHKKSEKQDKAQHTVCMDCS 89
Query: 149 PHLRWCFPCNTLIP-------VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFG 201
+ +C+ C+ + V+K E+ +N + + + R +E
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKL------LE----- 138
Query: 202 SGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 ----NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKEL 190
Query: 259 ----LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKA 302
L T G T ++L + F +T G + +P S F +
Sbjct: 191 PAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 250
Query: 303 PQFKGYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFV 352
P F+GYQQ D+HE +R LLD L S ++ ++ S N N V
Sbjct: 251 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSPSNKCCINGASTVV 310
Query: 353 DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + +N Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEDTVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|358054547|dbj|GAA99473.1| hypothetical protein E5Q_06172 [Mixia osmundae IAM 14324]
Length = 1213
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 92/200 (46%), Gaps = 37/200 (18%)
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-----------LNAELTFGPLTIA 271
G+ + GL N+GNTC+ NS +Q L A L +F N T G L A
Sbjct: 782 GDGTVGLTGLKNMGNTCYMNSTIQCLSATIPLARFFKDGSYRRAINRQNPMGTQGVLADA 841
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
+ +L ET N + P SF IC APQF+G QHDS E L LLDGL E+L F
Sbjct: 842 VGELIKVLWTET--YNFVAPVSFRDAICRFAPQFRGTDQHDSQEFLAFLLDGL-HEDLNF 898
Query: 332 -RKRNSPSEGNG---------------------ISSNQGPVFVDYVFGGQIASTVRCVEC 369
K+ P E + V V++ F GQ + ++C+ C
Sbjct: 899 VVKKPRPVEMTPEREAALESLPTQVASEKEWQIYTRRNNSVIVNW-FQGQYRNRLQCLTC 957
Query: 370 GHSSTVYEPFLDLSLPVPTK 389
G +ST Y+ F+ LSLP+P K
Sbjct: 958 GKTSTTYDTFMYLSLPLPNK 977
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLS-KLNGHVNF------ 951
K E N K +R ATKR+ +++ PPIL IH KRFS +G S +L+ V +
Sbjct: 999 KSEAWNCPRCKTRRKATKRLTLSRLPPILLIHFKRFS--FKGPFSERLDTVVRYPLSSLD 1056
Query: 952 -------------SEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
+ + N++P +Y Y L V H G++ GHY A+V+
Sbjct: 1057 LTNYLPPPLPPATANLYNVKPETVGPTASSSSYRYDLYAVSNHFGSLSSGHYTAFVK 1113
>gi|47224895|emb|CAG06465.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 87/185 (47%), Gaps = 30/185 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL---------NAELTFGPLTIALKKLFAE--T 279
GL NLGNTCF NS++Q L L+DY L N T L KL T
Sbjct: 62 GLKNLGNTCFMNSILQCLSNTHSLRDYCLHNAHRRDLNNNSRTNTALMEEFAKLLQTVWT 121
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNS- 336
P + ++P F I AP+F GY Q D+ E LR LLDGL +E + R R S
Sbjct: 122 SPSS---EAVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRGSA 178
Query: 337 ------PSEGNG------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
P E G + VD +F GQ+ S++ C CG STV++PF DLSL
Sbjct: 179 EDLDHLPDEEKGKKMWSKYLEREDSKIVD-LFVGQLKSSLTCSHCGFCSTVFDPFWDLSL 237
Query: 385 PVPTK 389
P+ K
Sbjct: 238 PIAKK 242
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 931 LKRFSQDARGRLSKLNGHVNF-SEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGH 989
LKRFS+ AR R SKL+ V+F + +++R + T N Y L V H GT GGH
Sbjct: 335 LKRFSE-AR-RTSKLSTFVSFPMKDLDMREFSSDSST---NAVYSLYAVSNHSGTTMGGH 389
Query: 990 YVAYVR 995
Y AY R
Sbjct: 390 YTAYCR 395
>gi|405117812|gb|AFR92587.1| ubiquitin C-terminal hydrolase Ubp16 [Cryptococcus neoformans var.
grubii H99]
Length = 624
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 103/218 (47%), Gaps = 47/218 (21%)
Query: 841 EMQSRSSCLR--------DSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGN 892
++SR C R DS S+ +G SV G + G++ E + D++
Sbjct: 255 RVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLA-GFTKEDKLEGDNKYHCER 313
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQD-----ARGRLSKLNG 947
C K K +ATK I++APPILT+HLKRFS + R R K N
Sbjct: 314 C---------------KRKANATKSFKIDQAPPILTLHLKRFSVNYNHYSGRARAEKFNQ 358
Query: 948 HVNFSEIINLRPYM-DPGCTDHDNYDYRLVGVVEHLGT-MRGGHYVAYVRGGPKNKVKAK 1005
+ F + +++ PYM +PG + YRL GV H GT +R GHY +YVRG
Sbjct: 359 PIKFEQTLDIAPYMVNPGSS---GTKYRLFGVTCHRGTELRFGHYTSYVRG--------- 406
Query: 1006 KESVGGVWYHASDVYVREVSLEEVLRCE-AYILFYEKI 1042
G W+HA D V V L +VL + AY+L Y ++
Sbjct: 407 ---PSGQWFHADDDDVSPVQLVQVLNDKTAYLLSYIRV 441
Score = 40.0 bits (92), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Query: 305 FKGYQQHDSHELLRCLLDGLCSEELA-------------FRKRNSPSEGNGISSNQGPVF 351
F +Q D+HE R + D L + LA F + S I +
Sbjct: 191 FSKNRQEDTHEFFRFVTDALQNTALAKLPKSVLHYHQQNFAHKTSRDIPEKIKHTS---W 247
Query: 352 VDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
V ++GG++ S V C C + S ++ FLDLSL V
Sbjct: 248 VYRIWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDV 282
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 111 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 166
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 167 LRNGKTAGRRTYHTRSQGENNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 226
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 227 GYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIF 286
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 287 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 319
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + +N Y L
Sbjct: 372 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAA 430
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + VL+ +AYI
Sbjct: 431 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEDTVLKAKAYI 477
Query: 1037 LFY 1039
LFY
Sbjct: 478 LFY 480
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 95 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 150
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 151 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 210
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 211 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 270
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 271 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 303
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 414
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 415 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 461
Query: 1037 LFY 1039
LFY
Sbjct: 462 LFY 464
>gi|202070754|ref|NP_001128484.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Rattus
norvegicus]
gi|302595968|sp|B2GUZ1.1|UBP4_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|149018536|gb|EDL77177.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_a [Rattus norvegicus]
gi|183985839|gb|AAI66460.1| Usp4 protein [Rattus norvegicus]
Length = 961
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L L +YFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 419
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 420 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 479 LPLPLKK 485
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ C
Sbjct: 801 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFV---CDR 856
Query: 968 HDN-YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY K + G WY+ D V S
Sbjct: 857 AARPYVYDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDDSSVSLASE 905
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 906 DQIVTKAAYVLFYQR 920
>gi|321249377|ref|XP_003191439.1| hypothetical protein CGB_A4490C [Cryptococcus gattii WM276]
gi|317457906|gb|ADV19652.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 643
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 102/218 (46%), Gaps = 47/218 (21%)
Query: 841 EMQSRSSCLR--------DSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGN 892
++SR C R DS S+ +G SV G + G++ E + D++
Sbjct: 275 RVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLA-GFTKEDKLEGDNKYHCEK 333
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQD-----ARGRLSKLNG 947
C K K +ATK +++APP+LT+HLKRFS + R R K N
Sbjct: 334 C---------------KCKANATKSFKVDQAPPVLTLHLKRFSVNYNPYSGRARAEKFNQ 378
Query: 948 HVNFSEIINLRPYM-DPGCTDHDNYDYRLVGVVEHLGT-MRGGHYVAYVRGGPKNKVKAK 1005
+ F + +++ PYM DP YRL GV H GT +R GHY +YVR
Sbjct: 379 PIKFEQNLDMAPYMVDPKSPGS---KYRLFGVTCHRGTELRFGHYTSYVR---------- 425
Query: 1006 KESVGGVWYHASDVYVREVSLEEVLRCE-AYILFYEKI 1042
S G W+HA D V V LE+VL + AY+L Y ++
Sbjct: 426 --SPSGQWFHADDDDVSPVQLEQVLNDKTAYLLSYIRV 461
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 305 FKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTV 364
F +Q D+HE R + D L + LA +++P + S +V V+GG++ S V
Sbjct: 227 FSKNRQEDTHEFFRFVTDALQNTALAKLPKDTPEKIKHTS------WVYRVWGGRVRSRV 280
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C C + S ++ FLDLSL V
Sbjct: 281 VCSRCNNPSDTFDSFLDLSLDV 302
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 95 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 150
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 151 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 210
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 211 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 270
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 271 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 303
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 414
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 415 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 461
Query: 1037 LFY 1039
LFY
Sbjct: 462 LFY 464
>gi|326926481|ref|XP_003209428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Meleagris
gallopavo]
Length = 444
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 136/328 (41%), Gaps = 57/328 (17%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHAR-----QTRHPLVIQWENPHLRWCFPCN 158
+K+ WVCL C CG H +H T H + E C C+
Sbjct: 10 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDCS 64
Query: 159 TL-IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNV-------NSEIK 210
+ + ++ N L V K+ + ++E++ F S NS +
Sbjct: 65 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQ------NLENSAFTSDRHRKRKLLENSSLN 118
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------LNAEL 263
S+ V+GS GL NLGNTCF N+++Q+L + Q YF L
Sbjct: 119 SKLLKVNGS----TTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGK 174
Query: 264 TFGPLT----------IALKKLFAETKPET--GLRNVINPRSFFGCICSKAPQFKGYQQH 311
T G T ++L + F +T G + +P S F + P F+GYQQ
Sbjct: 175 TAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQ 234
Query: 312 DSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIA 361
D+HE +R LLD L S + ++ +S + + N V +FGG +
Sbjct: 235 DAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLTASSKCCINGASTVVTAIFGGILQ 294
Query: 362 STVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ V C+ CG S ++PFLDLSL +P++
Sbjct: 295 NEVNCLICGTESRKFDPFLDLSLDIPSQ 322
>gi|114688817|ref|XP_521085.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 2 [Pan
troglodytes]
Length = 711
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 33/291 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + + E+
Sbjct: 249 CLSCVFFGC-------FTEKHIHKHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 300
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYV- 228
K+ ++++L+ ST++S + F E K + + V
Sbjct: 301 A--KETKEKILRLLTSTSTDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRKKSVY 358
Query: 229 ---VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
+RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 359 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 418
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 419 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 468
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
G +N +D +F G + S V C C ST +P D+SL +P
Sbjct: 469 SGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLP 519
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--------MDP 963
+++TK++ + K P + HLKRF + R K+N ++F +++ P+ M
Sbjct: 577 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKESRMKE 635
Query: 964 G-----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
G C ++N Y L V+ H GT+ GHY +++R +K+ W+ D
Sbjct: 636 GQPPTDCVPNEN-KYSLFAVINHHGTLESGHYTSFIR--------QQKDQ----WFSCDD 682
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 683 AIITKATIEDLLYSEGYLLFYHK 705
>gi|426396116|ref|XP_004064301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Gorilla
gorilla gorilla]
Length = 648
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + + E+
Sbjct: 186 CLSCVFFGC-------FTEKHIHKHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 237
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--STVVSGSDLDGNACY 227
K+ ++++L+ ST++S + F E K + V + Y
Sbjct: 238 A--KETKEKILRLLTSTSTDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRKKSVY 295
Query: 228 VV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
V RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 296 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 355
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 356 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 405
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
G +N +D +F G + S V C C ST +P D+SL +P
Sbjct: 406 SGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLP 456
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--------MDP 963
+++TK++ + K P + HLKRF + R K+N ++F +++ P+ M
Sbjct: 514 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKESRMKE 572
Query: 964 G-----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
G C ++N Y L V+ H GT+ GHY +++R +K+ W+ D
Sbjct: 573 GQPPTDCVPNEN-KYSLFAVINHHGTLESGHYTSFIR--------QQKDQ----WFSCDD 619
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 620 AIITKATIEDLLYSEGYLLFYHK 642
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 204 NVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----- 258
+V S ++S ++GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 111 SVTSSLRSRLLKINGS----TTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPA 166
Query: 259 --LNAELTFGPLT----------IALKKLFAETKPET--GLRNVINPRSFFGCICSKAPQ 304
L T G T ++L + F +T G + +P S F + P
Sbjct: 167 VELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN 226
Query: 305 FKGYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDY 354
F+GYQQ D+HE +R LLD L S + ++ + S N N V
Sbjct: 227 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSGLSASNKCCINGASTVVTA 286
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 287 IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 321
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 374 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 432
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 433 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 479
Query: 1037 LFY 1039
LFY
Sbjct: 480 LFY 482
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 135/328 (41%), Gaps = 57/328 (17%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHAR-----QTRHPLVIQWENPHLRWCFPCN 158
+K+ WVCL C CG H +H T H + E C C+
Sbjct: 5 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDCS 59
Query: 159 TL-IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNV-------NSEIK 210
+ + ++ N L V K+ + ++E++ F S NS +
Sbjct: 60 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQ------NLENSAFTSDRHRKRKLLENSSLN 113
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------LNAEL 263
S+ V+GS GL NLGNTCF N+++Q+L + Q YF L
Sbjct: 114 SKLLKVNGS----TTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGK 169
Query: 264 TFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQH 311
T G T ++L + F +T G + +P S F + P F+GYQQ
Sbjct: 170 TAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQ 229
Query: 312 DSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIA 361
D+HE +R LLD L S + ++ + S N N V +FGG +
Sbjct: 230 DAHEFMRYLLDHLHLELQGGFNGVSRSVILQENATLSASNKCCINGASTVVTAIFGGILQ 289
Query: 362 STVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ V C+ CG S ++PFLDLSL +P++
Sbjct: 290 NEVNCLICGTESRKFDPFLDLSLDIPSQ 317
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 370 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 428
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 429 VVVHHGSGVGSGHYTAY----------AAHE---GRWFHFNDSTVTLTDEETVVKAKAYI 475
Query: 1037 LFY 1039
LFY
Sbjct: 476 LFY 478
>gi|358341643|dbj|GAA49264.1| ubiquitin carboxyl-terminal hydrolase 2 [Clonorchis sinensis]
Length = 655
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF--------LNAELTF-GPLTIALKKLFAETKP 281
GL NLGNTCF NS++Q L L +Y LN T G L A L E
Sbjct: 320 GLNNLGNTCFMNSIIQCLSNTHPLLEYCISERYVNDLNKSSTMRGNLFTAYASLMNELWD 379
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
+ +P F I AP+F GY Q DS E LR +L+GL +E KR P +
Sbjct: 380 PEMFESSTSPMQFKTQIQRFAPRFVGYSQQDSQEFLRYVLEGLHNEVNRVTKRPHPVTPD 439
Query: 342 GISSNQ------------------GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ ++ VD +F GQ+ ST+ C ECG ST ++PF DLS
Sbjct: 440 YAAEDKLADRDKADLYWKRYLSMDNSAIVD-LFVGQLMSTLECAECGFKSTTFDPFWDLS 498
Query: 384 LPVPTK 389
LP+P K
Sbjct: 499 LPIPKK 504
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
KV+R TK + K P IL +HLKRFS + R R SK++ V++ +NL + P C
Sbjct: 534 KVRRRCTKHFSLQKFPRILVLHLKRFSGE-RFR-SKMSVLVDYPLNDLNLSEFASPSCQQ 591
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V H G++ GHY A R +N WY +D VR S +
Sbjct: 592 RYA-RYNLYAVSNHSGSVYAGHYTAICRHHYRNS-----------WYDYNDSRVRPTSTQ 639
Query: 1028 EVLRCEAYILFYEKI 1042
V+ E Y+LFYE I
Sbjct: 640 SVVSAEGYVLFYELI 654
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 95 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 150
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 151 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 210
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 211 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 270
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 271 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 303
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 414
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY+AY A E G W+H +D V E V++ +AYI
Sbjct: 415 VVVHHGSGVGSGHYIAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 461
Query: 1037 LFY 1039
LFY
Sbjct: 462 LFY 464
>gi|431913420|gb|ELK15095.1| Ubiquitin carboxyl-terminal hydrolase 4 [Pteropus alecto]
Length = 964
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 88/188 (46%), Gaps = 29/188 (15%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE- 282
V GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 301 VCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAEL 358
Query: 283 -----TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK---- 333
+G + PR F + APQF GYQQ DS ELL LLDGL + +K
Sbjct: 359 IKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Query: 334 --RNSPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+++ + + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDASGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 66/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS R KL+ V F SE + + R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYSRYWR-DKLDTVVEFPVRGLNMSEFVCDLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 54 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 109
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 110 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 169
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 170 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 229
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 230 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 262
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 315 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGLESCLYDLAA 373
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 374 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 420
Query: 1037 LFY 1039
LFY
Sbjct: 421 LFY 423
>gi|41152235|ref|NP_958443.1| ubiquitin carboxyl-terminal hydrolase 51 [Homo sapiens]
gi|52000873|sp|Q70EK9.1|UBP51_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 51; AltName:
Full=Deubiquitinating enzyme 51; AltName: Full=Ubiquitin
thioesterase 51; AltName:
Full=Ubiquitin-specific-processing protease 51
gi|40788183|emb|CAE47750.2| ubiquitin specific proteinase 51 [Homo sapiens]
gi|47174857|tpe|CAE48396.2| TPA: ubiquitin specific protease-51 [Homo sapiens]
gi|225000462|gb|AAI72281.1| Ubiquitin specific peptidase 51 [synthetic construct]
Length = 711
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + + E+
Sbjct: 249 CLSCVFFGC-------FTEKHIHKHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 300
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--STVVSGSDLDGNACY 227
K+ ++++L+ ST++S + F E K + V + Y
Sbjct: 301 A--KETKEKILRLLTSTSTDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRKKSVY 358
Query: 228 VV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
V RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 359 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 418
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 419 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 468
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
G +N +D +F G + S V C C ST +P D+SL +P
Sbjct: 469 SGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLP 519
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--------MDP 963
+++TK++ + K P + HLKRF + R K+N ++F +++ P+ M
Sbjct: 577 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKESRMKE 635
Query: 964 G-----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
G C ++N Y L V+ H GT+ GHY +++R +K+ W+ D
Sbjct: 636 GQPPTDCVPNEN-KYSLFAVINHHGTLESGHYTSFIR--------QQKDQ----WFSCDD 682
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 683 AIITKATIEDLLYSEGYLLFYHK 705
>gi|397465305|ref|XP_003804442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pan paniscus]
Length = 687
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 33/291 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + + E+
Sbjct: 225 CLSCVFFGC-------FTEKHIHKHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 276
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYV- 228
K+ ++++L+ ST++S + F E K + + V
Sbjct: 277 A--KETKEKILRLLTSTSTDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRKKSVY 334
Query: 229 ---VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
+RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 335 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 394
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 395 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 444
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
G +N +D +F G + S V C C ST +P D+SL +P
Sbjct: 445 SGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLP 495
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--------MDP 963
+++TK++ + K P + HLKRF + R K+N ++F +++ P+ M
Sbjct: 553 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKESRMKE 611
Query: 964 G-----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
G C ++N Y L V+ H GT+ GHY +++R +K+ W+ D
Sbjct: 612 GQPPTDCVPNEN-KYSLFAVINHHGTLESGHYTSFIR--------QQKDQ----WFSCDD 658
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 659 AIITKATIEDLLYSEGYLLFYHK 681
>gi|47208151|emb|CAF93184.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1677
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYFL+ T G L I L
Sbjct: 725 GLVNLGNTCFMNSVIQSLSNTRELRDYFLDRAFEGEINCSNPLGTGGRLAIGFAVLLRAL 784
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 785 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 840
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E + F+ +F GQ S + C C S ++PFL L
Sbjct: 841 ETVDSDGRLDEVVADEAWQRHKMRNDSFIVDLFQGQFKSKLVCPMCSKVSITFDPFLYLP 900
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 901 VPLPQKQ 907
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 71/179 (39%), Gaps = 52/179 (29%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY-MDPGCTDHDN 970
R+A+K++L+ + P +L I LKRFS + K+N V+F I L P+ + G D N
Sbjct: 1383 REASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFP-IRQLVPWPLLDGRFDFRN 1441
Query: 971 YD----------------YRLVGVVEHLGTMRGGHYVAY--------------------- 993
D Y L V+ H G M GGHY AY
Sbjct: 1442 LDLSRFCIGMKDEMQQPVYDLYAVINHYGGMIGGHYTAYARLPSDKNSQRSDVGQCAPPA 1501
Query: 994 -----------VRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
+RGGP++ + G W D V V +V+ AY+LFY +
Sbjct: 1502 PAPSPPPPAVLLRGGPRSPAVPRFFPAG--WRLFDDSTVTMVEESQVVTRYAYVLFYRR 1558
>gi|195476851|ref|XP_002100011.1| GE16403 [Drosophila yakuba]
gi|194187535|gb|EDX01119.1| GE16403 [Drosophila yakuba]
Length = 1157
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 103/228 (45%), Gaps = 60/228 (26%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQL-----------QDYFL-----------NAEL--- 263
VRGL NLGNTCFFN+VMQ L L +++ L + EL
Sbjct: 329 VRGLTNLGNTCFFNAVMQCLAQTPFLLSVLRELAEPGEEFVLPGGTFNIKDKGDIELPMI 388
Query: 264 -----TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
++G LT AL E + V P F +C K PQF G QHD+HELLR
Sbjct: 389 KGTLSSWGGLTAALANALEELQAGGC---VFTPSKLFDRLCMKCPQFTGGDQHDAHELLR 445
Query: 319 CLLDGLCSEELAFRKR-------------NSPSEGN----GISSNQGPVFV---DYVFGG 358
LL+ + +E+L +R NS SE I NQ + + VF G
Sbjct: 446 QLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRG 505
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPV-------PTKKAPSKKTQPA 399
+ ST+ C +C S+ +E FLD+SLPV P ++ PS + PA
Sbjct: 506 FLVSTLTCQDCHSVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSPA 553
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 862 DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLIN 921
++G CSV ++ ++A ++ +++ C+S ++ + K V +ATK++L++
Sbjct: 889 EDGECSVQSCLNN-FTAVELMTGQNKV---GCDSCTQRINGSDPKAKSVNTNATKQLLVS 944
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YR 974
P +L +HLKRF R KL V++ ++++ + + N D Y
Sbjct: 945 SPPAVLILHLKRFQLGPRCVFRKLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKLLYA 1004
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPK 999
L GVVEH G M GGHY AYV+ PK
Sbjct: 1005 LYGVVEHSGGMYGGHYTAYVKVRPK 1029
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ SD V+EVS + L+ +AY+LFYE+I
Sbjct: 1125 GKWYYVSDSRVQEVSEDTALKAQAYLLFYERI 1156
>gi|395856541|ref|XP_003800686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Otolemur
garnettii]
Length = 936
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
>gi|392891844|ref|NP_001254305.1| Protein F07A11.4, isoform b [Caenorhabditis elegans]
gi|387912084|emb|CCH63799.1| Protein F07A11.4, isoform b [Caenorhabditis elegans]
Length = 948
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 87/187 (46%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----FGPLTIA--LKKLFAETKPE- 282
GL N+GNTCF N+V+Q L+ +L++YFL PL L K FA+ +
Sbjct: 237 GLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMHQM 296
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG- 340
+G + I P + KA QF + QHD+HE L LLDGL E R + P G
Sbjct: 297 WSGHQKAIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGL--HEDVNRVKKKPLTGT 354
Query: 341 -----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
N I N +FVD +F GQ+ S V+C C S ++PF+ L
Sbjct: 355 VESHGRHDLDVSNEAWKNHILRNDS-IFVD-LFHGQLKSHVQCPNCDRVSITFDPFVYLP 412
Query: 384 LPVPTKK 390
+P P K
Sbjct: 413 VPFPKNK 419
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 886 SQLVAGNCESEESKVEE-INSKIVKVKRDATKRVLINKAPPILTIHLKRF------SQDA 938
+Q++ E+E K EE K +ATK++ + + PP+L I LKRF Q +
Sbjct: 764 TQMLDLFSETERLKPEESWYCSTCKENVEATKKLQLYRLPPVLIIQLKRFVYTAFTYQSS 823
Query: 939 RGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGG 997
R SK V + E +++ P++ ++ Y L GVV H G GHY++ R
Sbjct: 824 MARRSKDTRSVEYPLESLDMSPFLAETSPHPNSTMYDLTGVVCHSGNSYFGHYISMGRLA 883
Query: 998 PKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYE 1040
+ K K E W + D V S + +AY+LFY+
Sbjct: 884 DFDSSKTKIE-----WRNFDDSTVARQSTSTLQTEDAYLLFYK 921
>gi|297742456|emb|CBI34605.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 91/192 (47%), Gaps = 42/192 (21%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAELTFGPLTIALK 273
+ GL NLGNTCF NS +Q L+ + +YFL N EL F L+
Sbjct: 324 LAGLQNLGNTCFMNSAIQCLVHTPPIFEYFLQDYTEEINKQNPLGMNGELAFA-FGELLR 382
Query: 274 KLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK 333
KL++ R + PR+F G + APQF GY QHDS ELL LLDGL E+L R
Sbjct: 383 KLWSSG------RTPVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN-RV 434
Query: 334 RNSP----SEGNG-------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVY 376
+ P + NG + + VD V GQ ST+ C C S +
Sbjct: 435 KQKPYIETKDSNGRPDEEVADECWRNHKARNDSLIVD-VCQGQYKSTLVCPVCSKISITF 493
Query: 377 EPFLDLSLPVPT 388
+PF+ LSLP+P+
Sbjct: 494 DPFMYLSLPLPS 505
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R ATK++ + + P IL HLKRFS +R +KL+ VNF ++L Y+
Sbjct: 804 KEHRQATKKLDLWRLPDILVFHLKRFSY-SRYLKNKLDTLVNFPIHSLDLSQYVKCKDAS 862
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L + H G + GGHY AY + +N+ WYH D +V V
Sbjct: 863 SQSHVYELYAISNHYGGLGGGHYSAYAKLIDENR-----------WYHFDDSHVSPVGES 911
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY+++
Sbjct: 912 EIKTSAAYVLFYQRV 926
>gi|326669890|ref|XP_002663119.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Danio rerio]
Length = 990
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKP 281
V GL NLGNTCF NS +Q L L +YFL EL F PL + + + +A+
Sbjct: 241 VCGLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELNFSNPLGMKGEIAEAYADVIK 300
Query: 282 E--TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+ +G + PR F + A QF GYQQHDS ELL LLDGL E+L K+ E
Sbjct: 301 QMWSGRHYSVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLLDGL-HEDLNRVKKKEYIE 359
Query: 340 -----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
N + N V VD F G ST+ C EC S ++PF L
Sbjct: 360 LRDADGRPDQEVAEEAWRNHLRRNDS-VIVD-TFHGLFKSTLVCPECNKVSVTFDPFCYL 417
Query: 383 SLPVPTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
S+P+P K + P ++ + +L K+GR+
Sbjct: 418 SVPLPVSKERVMEVFYVSLDPTAKPTQYRLIVPKAGRV 455
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 27/137 (19%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM--------DPG 964
ATK++ + P +L IHLKRFS R KL+ V F ++ ++ +P
Sbjct: 829 ATKKLDLWSLPEVLIIHLKRFSYTKYSR-EKLDTIVEFPLRDLDFSGFLLKKTVNSTEPP 887
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
C Y L+ V H G +R GHY +Y R G WY+ D V
Sbjct: 888 CP------YDLISVSNHYGGLRDGHYTSYARNKD-----------NGQWYYFDDSKVTYA 930
Query: 1025 SLEEVLRCEAYILFYEK 1041
E+++ AY+LFY++
Sbjct: 931 REEQIVTSAAYLLFYQR 947
>gi|390345682|ref|XP_003726385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32
[Strongylocentrotus purpuratus]
Length = 1718
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 93/190 (48%), Gaps = 31/190 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKP 281
V GL+NLGNTCF NS +Q + L+ YF + PL + L K + +
Sbjct: 778 VTGLSNLGNTCFMNSAVQCISNTQPLRLYFQTKSYLYELNPTNPLGMKGHLAKRYGDLCN 837
Query: 282 E--TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+ +G I P I AP+F G+QQHDS ELL LLDGL E+L R P
Sbjct: 838 DLWSGTARSIAPLKLRWTIAKYAPRFSGFQQHDSQELLAFLLDGL-HEDLN-RVHEKPYV 895
Query: 338 ----SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
S+G N + N+ V VD +F GQ+ S VRC CGH S ++PF
Sbjct: 896 ELKDSDGRPDEEVATEAWENHLIRNKS-VIVD-LFQGQLKSQVRCKTCGHISVRFDPFTF 953
Query: 382 LSLPVPTKKA 391
LSLP+P + +
Sbjct: 954 LSLPLPMESS 963
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 957 LRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHA 1016
L P P D Y L GVV H G + GGHYV+Y V K+ WY
Sbjct: 1610 LHPQTKPEEDVDDGQMYDLYGVVSHTGILGGGHYVSY-------SVNPNKK-----WYCY 1657
Query: 1017 SDVYVREVSLEEVLRCEAYILFYE 1040
+D V+EV EE+ AY+LFYE
Sbjct: 1658 NDSSVKEVK-EEIDMDNAYMLFYE 1680
>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
Length = 587
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 38/238 (15%)
Query: 175 ALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLAN 234
AL ++ K ++ R++ S+ V G V ++ KS S VV G + GL N
Sbjct: 5 ALPDLHKELRPRTSMPGSLLVSTF---VGLVLNKTKS-SKVVQG----------LTGLRN 50
Query: 235 LGNTCFFNSVMQNLLAMSQLQDYFL---------NAELTFGPLTIALKKLFAETKPETGL 285
LGNTCF NS++Q L +L+DY L N PL KL + +
Sbjct: 51 LGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTPLMSEFAKLI-QLLWTSSP 109
Query: 286 RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEGNGI 343
+ ++P F I AP+F GY Q D+ E LR LLDGL E + R R + + +
Sbjct: 110 NDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANADTLDHL 169
Query: 344 SSNQGP--VFVDY----------VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
++ ++ Y +F GQ+ S++ C ECG+ ST ++PF DLSLP+P K
Sbjct: 170 PDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPKK 227
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + TK+ I K P IL +HLKRFS +AR R SKL VNF + ++LR + C
Sbjct: 259 KARTRCTKKFSIQKFPKILVLHLKRFS-EARIRASKLTTFVNFPLKDLDLREFASQSC-- 315
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L V H GT GGHY AY KE W+ +D V +S
Sbjct: 316 -NHAVYNLYAVANHSGTTMGGHYTAYC-----------KEPHLQEWHSFNDSRVTPMSSS 363
Query: 1028 EVLRCEAYILFYE 1040
V +AY+LFYE
Sbjct: 364 HVRSSDAYLLFYE 376
>gi|260820838|ref|XP_002605741.1| hypothetical protein BRAFLDRAFT_121867 [Branchiostoma floridae]
gi|229291076|gb|EEN61751.1| hypothetical protein BRAFLDRAFT_121867 [Branchiostoma floridae]
Length = 1785
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 144/326 (44%), Gaps = 61/326 (18%)
Query: 109 VCLGCGHYACGGVGLP--TTPQ---SHVVRHARQTRHPLVIQWENPHLR--------WCF 155
V LG H+ GG+ P TTP+ ++V +R T L+ Q+ LR W F
Sbjct: 763 VQLGGFHFGPGGITGPMNTTPRRYLAYVAAFSRMTTLKLMYQYLCNRLRIREDDMRLWNF 822
Query: 156 PCNTLIPVEKTEENG---ENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE 212
K E N E +D E++ + + I + + +W + + K+
Sbjct: 823 ---------KEESNAYLLEEEDHTLEMLGIDDNQQILIEVRNKDMSWPEEMSSLANQKNR 873
Query: 213 STVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----EL-TFGP 267
+ G GL+NLGNTCF NS +Q + L +YF++ EL T P
Sbjct: 874 MEKKQAAAEKG-----ATGLSNLGNTCFMNSGLQCISNTHALTEYFISGRHLYELNTINP 928
Query: 268 LTIA--LKKLFAETKPE--TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDG 323
L + + + + + + +G I P I AP+F G+QQHDS ELL LLDG
Sbjct: 929 LGMKGHIARRYGDLVQDLWSGTSKTIAPLKMRWTIAKYAPRFNGFQQHDSQELLAFLLDG 988
Query: 324 LCSEELAFRKRNSP------SEG------------NGISSNQGPVFVDYVFGGQIASTVR 365
L E+L R P S+G N + N+ + VD +F GQ+ S VR
Sbjct: 989 L-HEDLN-RVHEKPYVELKDSDGRADEEVAKEAWDNHLMRNRS-IVVD-LFHGQLKSQVR 1044
Query: 366 CVECGHSSTVYEPFLDLSLPVPTKKA 391
C+ C H + ++PF +SLP+P A
Sbjct: 1045 CLHCTHVNVRFDPFNFMSLPLPMDNA 1070
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 964 GCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVRE 1023
G D + Y L + H G + GGHYV+Y + + G WY +D +E
Sbjct: 1683 GALDTAHIRYDLFAISCHTGILGGGHYVSYAK------------NPNGKWYCYNDSSCKE 1730
Query: 1024 VSLEEVLRCEAYILFYEK 1041
V +++ AY+LFYE+
Sbjct: 1731 VHPDQIDTDSAYMLFYER 1748
>gi|194888745|ref|XP_001976964.1| GG18759 [Drosophila erecta]
gi|190648613|gb|EDV45891.1| GG18759 [Drosophila erecta]
Length = 1127
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 102/228 (44%), Gaps = 60/228 (26%)
Query: 229 VRGLANLGNTCFFNSVMQNL----LAMSQLQDY------FLNAELTF------------- 265
VRGL NLGNTCFFN+VMQ L +S L++ F+ TF
Sbjct: 315 VRGLTNLGNTCFFNAVMQCLAQTPFLLSVLRELAEPGEEFVLPGGTFNIKDKGDIELPMI 374
Query: 266 -------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
G LT AL E + V P F +C K PQF G QHD+HELLR
Sbjct: 375 KGTLSSWGGLTAALANALEELQAGGC---VFTPSKLFDRLCIKCPQFTGGDQHDAHELLR 431
Query: 319 CLLDGLCSEELAFRKR-------------NSPSEGN----GISSNQGPVFV---DYVFGG 358
LL+ + +E+L +R NS SE I NQ + + VF G
Sbjct: 432 QLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRG 491
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPV-------PTKKAPSKKTQPA 399
+ ST+ C +C S+ +E FLD+SLPV P ++ PS + PA
Sbjct: 492 FLVSTLTCQDCHSVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELNPA 539
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 862 DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLIN 921
++G CSV ++ ++A ++ +++ CES ++ + K V +ATK++L++
Sbjct: 864 EDGECSVQSCLNN-FTAVELMTGQNKV---GCESCTQRINGSDPKAKSVNTNATKQLLVS 919
Query: 922 KAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YR 974
P +L +HLKRF R KL V++ ++++ + + N D Y
Sbjct: 920 SPPAVLILHLKRFQLGPRCIFRKLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKLLYA 979
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPK 999
L GVVEH G M GGHY AYV+ PK
Sbjct: 980 LYGVVEHSGGMYGGHYTAYVKVRPK 1004
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 1011 GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY+ SD V+EVS + L+ +AY+LFYE+I
Sbjct: 1095 GKWYYVSDSRVQEVSEDTALKAQAYLLFYERI 1126
>gi|357111554|ref|XP_003557577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Brachypodium distachyon]
Length = 882
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIALKKLFAETK 280
GL NLGNTCF NS +Q L ++L DYFL N G L +A +L
Sbjct: 248 GLENLGNTCFMNSSIQCLAHTTKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRSLW 307
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE---------ELAF 331
T R + P F I APQF G+ QHDS ELL LLDGL + E A
Sbjct: 308 --TNDRKQVAPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNHVKCKPYEEAK 365
Query: 332 RKRNSPSE-------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
P E N ++ N V VD GQ ST+ C C +S ++PF+ LSL
Sbjct: 366 DASGRPDEEVADEYWSNHLARNDS-VIVD-TCHGQYKSTLTCPTCSKTSVTFDPFMYLSL 423
Query: 385 PVPT 388
PVP+
Sbjct: 424 PVPS 427
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + A K++ + + P +L IHLKRFS R +KL V+F ++L PY+ +
Sbjct: 762 KKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTR-NKLETSVDFPISDLDLSPYI-AAKHE 819
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
N Y L + H G M GGHY A + G WY D V + +
Sbjct: 820 QPNSHYHLYAISNHYGNMGGGHYTASIY------------QEGKGWYKFDDECVTPIRED 867
Query: 1028 EVLRCEAYILFYEK 1041
+ AY+LFY +
Sbjct: 868 SIKTPAAYVLFYRR 881
>gi|157824037|ref|NP_001099563.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Rattus
norvegicus]
gi|149018537|gb|EDL77178.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_b [Rattus norvegicus]
Length = 914
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L L +YFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 314 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 372
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 373 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 431
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 432 LPLPLKK 438
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ C
Sbjct: 754 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFV---CDR 809
Query: 968 HDN-YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY K + G WY+ D V S
Sbjct: 810 AARPYVYDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDDSSVSLASE 858
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 859 DQIVTKAAYVLFYQR 873
>gi|242084278|ref|XP_002442564.1| hypothetical protein SORBIDRAFT_08g022020 [Sorghum bicolor]
gi|241943257|gb|EES16402.1| hypothetical protein SORBIDRAFT_08g022020 [Sorghum bicolor]
Length = 890
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 102/221 (46%), Gaps = 54/221 (24%)
Query: 201 GSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL- 259
G+ N++ + S S+ GS L GL NLGNTCF NS +Q L S+L DYFL
Sbjct: 255 GTMNMDVDSSSGSSKQVGSGL--------TGLDNLGNTCFMNSAVQCLAHTSKLVDYFLG 306
Query: 260 --------------NAELT--FGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAP 303
EL FG L L+KL+A R + PR F + AP
Sbjct: 307 DFHKEINPHNPLGMKGELACAFGDL---LRKLWAID------RTPVAPRQFKSRLGRFAP 357
Query: 304 QFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE-----------------GNGISSN 346
QF G+ QHDS ELL LLDGL E+L K SE GN ++ N
Sbjct: 358 QFSGFNQHDSQELLAFLLDGL-HEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHLARN 416
Query: 347 QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ VD + GQ ST+ C C S ++PF+ LSLP+P
Sbjct: 417 DS-IIVD-ICQGQYKSTLVCPICKKVSVTFDPFMYLSLPLP 455
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + A+K++ + + P IL IHLKR S +R KL V+F ++L Y+ C D
Sbjct: 752 KEHQQASKKLDLWRLPEILIIHLKRCSY-SRYTKYKLETFVDFPIHDLDLSKYIGHRCQD 810
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++YRL + H G++ GGHY AYV K WY D +V ++ +
Sbjct: 811 VP-HNYRLYAISNHYGSLGGGHYTAYVYHEGKKG-----------WYDFDDRHVGPITED 858
Query: 1028 EVLRCEAYILFYEKI 1042
+ AY+LFY +I
Sbjct: 859 SIKTSAAYVLFYRRI 873
>gi|432865793|ref|XP_004070616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Oryzias
latipes]
Length = 1552
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAEL-------TFGPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF AE+ T G L I L
Sbjct: 744 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRAFEAEINCSNPLGTGGRLAIGFAVLLRAL 803
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 804 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 859
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E + F+ +F GQ S + C C S ++PFL L
Sbjct: 860 ETVDSDGRLDEVVAEEAWQRHKMRNDSFIVDLFQGQFKSKLVCPMCSKVSITFDPFLYLP 919
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 920 VPLPQKQ 926
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH-DN 970
R+A+K++L+ + P +L I LKRFS + K+N V+F + NL + C D+
Sbjct: 1350 REASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFP-VRNLD--LSKFCIGQKDD 1406
Query: 971 YD----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y L V+ H G M GGHY AY R P +K +++ VG W D V V
Sbjct: 1407 MQQPPIYDLYAVINHYGGMIGGHYTAYAR-LPSDK-NSQRSDVG--WRLFDDSTVTMVEE 1462
Query: 1027 EEVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1463 SQVVTRYAYVLFYRR 1477
>gi|335776008|gb|AEH58762.1| ubiquitin carboxyl-terminal hydrolase 3-like protein [Equus
caballus]
Length = 413
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 87 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 142
Query: 259 LNAELTFGPLT----------IALKKLFAETKPET--GLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 143 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 202
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 203 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSPSNKCCINGASTVVTAIF 262
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 263 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 295
>gi|426249549|ref|XP_004018512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Ovis
aries]
Length = 963
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRGLNMSEFVCDPSAR 861
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK+ K WY+ D V
Sbjct: 862 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDDSNVSLACE 907
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 908 DQIVTKAAYVLFYQR 922
>gi|426396114|ref|XP_004064300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Gorilla
gorilla gorilla]
Length = 469
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 34/309 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + + E+
Sbjct: 7 CLSCVFFGC-------FTEKHIHKHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 58
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--STVVSGSDLDGNACY 227
K+ ++++L+ ST++S + F E K + V + Y
Sbjct: 59 A--KETKEKILRLLTSTSTDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRKKSVY 116
Query: 228 VV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
V RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 117 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 176
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 177 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 226
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKT 396
G +N +D +F G + S V C C ST +P D+SL +P A
Sbjct: 227 SGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQ 286
Query: 397 QPASRAKKT 405
P RA T
Sbjct: 287 NP-ERADST 294
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--------MDP 963
+++TK++ + K P + HLKRF + R K+N ++F +++ P+ M
Sbjct: 335 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKESRMKE 393
Query: 964 G-----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
G C ++N Y L V+ H GT+ GHY +++R W+ D
Sbjct: 394 GQPPTDCVPNEN-KYSLFAVINHHGTLESGHYTSFIRQQKDQ------------WFSCDD 440
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 441 AIITKATIEDLLYSEGYLLFYHK 463
>gi|417402329|gb|JAA48015.1| Putative ubiquitin carboxyl-terminal hydrolase 22 [Desmodus
rotundus]
Length = 525
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 135/330 (40%), Gaps = 42/330 (12%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G L K + CL C + C + H+ HA+ R
Sbjct: 49 GTAEARKRKAKSCICHVCGVHL---KRLHSCLHCVFFGC-------FTKKHIHEHAKSKR 98
Query: 140 HPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAW 199
H L I+ + +CF C I +KD + + K + R+ ++ V + +
Sbjct: 99 HNLAIELMYGGI-YCFLCQDYI---------YDKD-MEMIAKEERQRAGKMQGVGEKFST 147
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
+ E+ + + N +RGL NLGNTCF N ++Q L L+D+FL
Sbjct: 148 WEPSKRELELLKHNP--KRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFL 205
Query: 260 N------AELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS 313
+ + L + LF E +G R+ P + + A GY+Q D+
Sbjct: 206 SDRHRCEMQSPSSCLVCEMSSLFQEFY--SGHRSPHIPYKLLHLVWTHARHLAGYEQQDA 263
Query: 314 HELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECG 370
HE L LD L C + +K N+P+ N I +D +F G + S V C C
Sbjct: 264 HEFLIAALDVLHRHCKGDDNGKKANNPNHCNCI--------IDQIFTGGLQSDVTCQVCH 315
Query: 371 HSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
ST +PF D+SL +P P P S
Sbjct: 316 GVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F ++++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLVLDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + ++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPADSLSNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+E+VL E Y+LFY K
Sbjct: 497 AIITKASIEDVLDSEGYLLFYHK 519
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 33/194 (17%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF 265
NS + S+ V+GS GL NLGNTCF N+++Q+L ++ + F
Sbjct: 139 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLRSLVE----------EF 184
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL- 324
AL + G + +P S F + P F+GYQQ D+HE +R LLD L
Sbjct: 185 RKTLCALWQ---------GSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 235
Query: 325 ---------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTV 375
S +++++ S N N V +FGG + + V C+ CG S
Sbjct: 236 LELQGGFNGVSRSAILQEKSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRK 295
Query: 376 YEPFLDLSLPVPTK 389
++PFLDLSL +P++
Sbjct: 296 FDPFLDLSLDIPSQ 309
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P L +HLKRF A R +K++ +V F ++++ Y ++P + D+ Y L
Sbjct: 362 IQKLPKALCLHLKRFHWTAYLR-NKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAA 420
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 421 VVVHHGSGVGSGHYTAY----------AVHE---GRWFHFNDSTVTVTDEETVGKAKAYI 467
Query: 1037 LFY 1039
LFY
Sbjct: 468 LFY 470
>gi|355728062|gb|AES09403.1| ubiquitin specific peptidase 4 [Mustela putorius furo]
Length = 684
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 24 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 81
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 82 QMWSGRDSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 139
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 140 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 198
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 199 TLPLPLKK 206
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 524 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 582
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 583 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 620
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 621 SNVSLASEDQIVTKAAYVLFYQR 643
>gi|348553563|ref|XP_003462596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 2
[Cavia porcellus]
Length = 929
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 90/182 (49%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFL+ EL F PL + L + +A+ +T
Sbjct: 261 GLTNLGNTCFMNSALQCLSNVPQLTEYFLDNRYLEELNFRNPLGMRGELAEAYADLVKQT 320
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 321 WSGCHRSIVPNVFKNKVGRFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 380
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 381 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 439
Query: 387 PT 388
P
Sbjct: 440 PV 441
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P IL IHLKRFS + + +L L ++FSE + ++P + +
Sbjct: 778 ATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTLVHFPIRDLDFSEFV-IKPQNE---SA 833
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 834 PELYKYDLIAVSNHYGGIRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 882
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 883 QIESKAAYVLFYQR 896
>gi|395517831|ref|XP_003763075.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Sarcophilus harrisii]
Length = 461
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 90/187 (48%), Gaps = 27/187 (14%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET-- 279
V GL NLGNTCF NS +Q L + L +YFL+ EL F PL + + + +A+
Sbjct: 253 VCGLTNLGNTCFMNSALQCLSNVPPLTEYFLHNHYLKELNFCNPLGMKGEIAEAYADLVK 312
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+ +G + PR F + A QF GYQQHDS ELL LLDGL E+L K+ E
Sbjct: 313 QAWSGHHRAVVPRMFKTKVGHFASQFLGYQQHDSQELLSFLLDGL-HEDLNRVKKKEYVE 371
Query: 340 ----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
V VD +F G ST+ C ECG S ++PF LS
Sbjct: 372 LRDAAGRPDQEVADEAWRNHKRRNDSVIVD-IFHGLFKSTLVCPECGKVSVTFDPFCYLS 430
Query: 384 LPVPTKK 390
+P+P K
Sbjct: 431 VPLPVSK 437
>gi|344275820|ref|XP_003409709.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Loxodonta africana]
Length = 961
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 800 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 858
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 859 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 896
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 897 SSVSLASEDQIVTKAAYVLFYQR 919
>gi|440893726|gb|ELR46396.1| Ubiquitin carboxyl-terminal hydrolase 4 [Bos grunniens mutus]
Length = 963
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRGLNMSEFVCDPSAR 861
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK+ K WY+ D V
Sbjct: 862 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDDSNVSLACE 907
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 908 DQIVTKAAYVLFYQR 922
>gi|410951165|ref|XP_003982270.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Felis
catus]
Length = 964
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 37/215 (17%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 68 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 123
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 124 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 183
Query: 307 GYQQHDSHELLRCLLDGL------------CSEELAFRKRNSPSEGNGISSNQGPVFVDY 354
GYQQ D+HE +R LLD L CS L ++ ++ S N N V
Sbjct: 184 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSCSPIL--QENSTLSASNKCCINGASTVVTA 241
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 242 IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 276
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + +N Y L
Sbjct: 329 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAA 387
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 388 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTEEDTVVKAKAYI 434
Query: 1037 LFY 1039
LFY
Sbjct: 435 LFY 437
>gi|224145371|ref|XP_002336224.1| predicted protein [Populus trichocarpa]
gi|222832697|gb|EEE71174.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 93/188 (49%), Gaps = 42/188 (22%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF---LNAELTF-------GPLTIA----LKKLF 276
GL NLGNTCF NS +Q L+ S+ +YF + E+ + G L +A L++L+
Sbjct: 121 GLQNLGNTCFMNSAIQCLVHTSEFAEYFREDYHQEINWKNPLGMVGELALAFGELLRRLW 180
Query: 277 AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS 336
A R I PR F + APQF GY QHDS ELL LLDGL E+L R ++
Sbjct: 181 APG------RTAIAPRQFKMKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN-RVKHK 232
Query: 337 PSE------------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEP 378
P + + I+ N + VD V GQ ST+ C EC S ++P
Sbjct: 233 PYKKSKDADGRPDEEVADEYWASHIARNDS-IIVD-VCQGQYKSTLVCPECNKISVTFDP 290
Query: 379 FLDLSLPV 386
F+ LSLP+
Sbjct: 291 FMYLSLPL 298
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K +R A+K++ + + P +L IHLKRFS +R KL VNF P D T++
Sbjct: 605 KERRQASKKLDLWRLPEVLVIHLKRFSY-SRSMKHKLETFVNF-------PIRDFDLTNY 656
Query: 969 -------DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
Y L + H G M GHY A+++ +N+ WY+ D ++
Sbjct: 657 IANKNNTQRQLYELYALTNHYGGMGSGHYTAHIKLLDENR-----------WYNFDDAHI 705
Query: 1022 REVSLEEVLRCEAYILFYEKI 1042
++ E+V AY+LFY ++
Sbjct: 706 SPINEEDVKSAAAYVLFYRRV 726
>gi|154152175|ref|NP_001093789.1| ubiquitin carboxyl-terminal hydrolase 4 [Bos taurus]
gi|158513811|sp|A6QR55.1|UBP4_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|151554732|gb|AAI50121.1| USP4 protein [Bos taurus]
gi|296474786|tpg|DAA16901.1| TPA: ubiquitin specific protease 4 [Bos taurus]
Length = 963
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRGLNMSEFVCDPSAR 861
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK+ K WY+ D V
Sbjct: 862 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDDSNVSLACE 907
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 908 DQIVTKAAYVLFYQR 922
>gi|449455503|ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
gi|449515075|ref|XP_004164575.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
Length = 552
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 138/317 (43%), Gaps = 36/317 (11%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHAR-QTRHPLVIQWENPHLRWCFPCNTLIPVEK 165
+++CL C +C +H + H + + H L + E L +C+ C+ +
Sbjct: 66 LYICLICASISCS---------NHTLLHYQSENGHDLAVDVERAEL-YCYACSDQVYDPD 115
Query: 166 TEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNA 225
+ +K + V + K +S I + GS ++ ++K+ ++S D +
Sbjct: 116 FDRTVMSKHIV--VPEKSKSQSESIGERSSKRRRLGSVDL-LDLKNLKPLISVKDQRSKS 172
Query: 226 CYVV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN--------AELTFGPLTIALKKL 275
CY + RGL NLGNTCF NSV+Q L L +YFLN ++ G L +
Sbjct: 173 CYPLGLRGLNNLGNTCFMNSVLQVFLHTPPLSNYFLNDQHNRETCSKRPIGQLCLPCDID 232
Query: 276 FAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN 335
+ +G +P F + Y+Q D+HE +LD + E RK
Sbjct: 233 CIFSAVFSGDHMPYSPAQFLYSWWQHSANLACYEQQDAHEFFISVLDRIHERE---RKSR 289
Query: 336 SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPS-- 393
S + NG F GQ+ S V C+ CG +ST Y+P +D+SL + T+ S
Sbjct: 290 SQDKENG----DCKCIAHRAFSGQLRSDVTCMTCGFTSTTYDPCVDISLDLDTQDFSSRN 345
Query: 394 ---KKTQPASRAKKTKL 407
K T+PA + K+ L
Sbjct: 346 IAGKLTKPADFSSKSTL 362
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 44/172 (25%)
Query: 884 SDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLS 943
SD +L NC+ KR++ K++ I + P +L +H+KRF R S
Sbjct: 377 SDQKLFCQNCQE---------------KRNSVKQMSIRRLPLVLCLHIKRFEHSFIRRTS 421
Query: 944 -KLNGHVNFSEIINLRPYMDPG-----------CTDHDNYD----YRLVGVVEHLGTMRG 987
K++ ++ F +++ PY+ ++ D D + + VV H GT+
Sbjct: 422 RKIDRYLQFPFSLDMIPYLSSSIIRNRFGNRIFASEGDELDASSKFEIFAVVSHSGTLES 481
Query: 988 GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
GHYV Y+R + WY D ++ EV E V + Y++FY
Sbjct: 482 GHYVTYLR-------------LRNRWYKCDDAWITEVDEEMVRNSQCYMMFY 520
>gi|296225191|ref|XP_002758385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Callithrix jacchus]
Length = 963
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRINPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNGISSN-------------QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDSVVAKEAWENHKLRNDSVIVD-TFHGLFKSTLVCPECFKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNQSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 511
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 146/339 (43%), Gaps = 58/339 (17%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENP-------HLRWCFP 156
+K+ W+CL C CG H +H +T+ V Q +N H C
Sbjct: 35 NKSPWICLTCLVVHCGRY-----VNGHAKKHFEETQAVGVSQRKNDKQEKEKYHHCVCMD 89
Query: 157 CNTL-IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTV 215
C++ + + ++ N L +V K + + + + D + K + ++
Sbjct: 90 CSSYSVFCYRCDDFVVNDTKLGQVQKAREHLQSLETITSMSDR-------QRKRKLQESL 142
Query: 216 VSGSDL--DGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--------------- 258
S L + C GL NLGNTCF N+++Q+L + Q YF
Sbjct: 143 APDSKLVKERWDCSRCTGLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLRSGKTAG 202
Query: 259 --LNAELTFGPLTIALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSH 314
+ + G +++L + F +T G + +P S F I P F+GYQQ D+H
Sbjct: 203 RRMYHTRSQGESSVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGYQQQDAH 262
Query: 315 ELLRCLLDGLCSEELAFRKRN------SPSEGNGISSNQGPV-------FVDYVFGGQIA 361
E +R LLD L EL RN SP +G +++ G V +FGG +
Sbjct: 263 EFMRYLLDHL-HRELQ-NSRNGASHTASPQDGVRLTAADGKCCINGTASVVTSIFGGILQ 320
Query: 362 STVRCVECGHSSTVYEPFLDLSLPVPT--KKAPSKKTQP 398
+ V C+ CG S ++PFLDLSL +P+ ++ SK +P
Sbjct: 321 NEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEP 359
Score = 46.2 bits (108), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 24/134 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCT 966
K ++ +TK+ + K P +L +HLKRF A R +K++ +V F + +++R Y ++P +
Sbjct: 390 KKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLR-NKIDTYVEFPLKGLDMRGYLLEPENS 448
Query: 967 DHDNYDYRLVGVVE-HLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
++ Y LV V + G H WYH +D V S
Sbjct: 449 LPESCVYDLVAVASPSMDLAYGSH--------------------EDRWYHFNDSTVTLTS 488
Query: 1026 LEEVLRCEAYILFY 1039
+ V + +AYILFY
Sbjct: 489 EDAVRKAKAYILFY 502
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 95 NSSLNSKLLKVNGS----TTAVCATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 150
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 151 LRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 210
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 211 GYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIF 270
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 271 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 303
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + +N Y L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAA 414
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 415 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEDTVVKAKAYI 461
Query: 1037 LFY 1039
LFY
Sbjct: 462 LFY 464
>gi|353238811|emb|CCA70745.1| related to UBP12-ubiquitin C-terminal hydrolase [Piriformospora
indica DSM 11827]
Length = 1142
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 89/185 (48%), Gaps = 30/185 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELT-FGPLTI--ALKKLFAET--KP 281
GL NLGNTCF NS +Q L +L +YFL EL PL + A+ ++F K
Sbjct: 401 GLNNLGNTCFMNSALQCLAHTPELTEYFLTGVYRTELNPTNPLGMKGAIAEVFGGVLDKL 460
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEEL--AFRK------ 333
+ + PR F + APQF GY QHD+ E L LLDGL E+L +K
Sbjct: 461 WHPISYAVAPREFKQQLQRFAPQFSGYAQHDTQEFLAFLLDGL-HEDLNRVLKKPYVENP 519
Query: 334 -----------RNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+++ + G V VD +F GQ ST+ C EC S ++PF+ L
Sbjct: 520 DWNGGGEKELVKHAATAWEGYKKRNDSVIVD-LFQGQYKSTLVCPECEKVSITFDPFMYL 578
Query: 383 SLPVP 387
+LP+P
Sbjct: 579 TLPLP 583
>gi|345787398|ref|XP_533829.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Canis
lupus familiaris]
Length = 964
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 91/188 (48%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL AE+ PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|344275822|ref|XP_003409710.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Loxodonta africana]
Length = 914
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 314 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 371
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 431 TLPLPLKK 438
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 753 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 811
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 812 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 849
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 850 SSVSLASEDQIVTKAAYVLFYQR 872
>gi|145482423|ref|XP_001427234.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394314|emb|CAK59836.1| unnamed protein product [Paramecium tetraurelia]
Length = 1041
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFA 277
V GL NLGNTCF NS Q L QL +YF+ + T G L L
Sbjct: 372 VAGLGNLGNTCFMNSGTQCLSNTYQLSEYFITNKYFDEINEDNPLGTNGQLVRKYASLIK 431
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
K G +N++ P SF + P FKG+QQHDS EL+ LLDGL E+L R + P
Sbjct: 432 --KLWCGDKNIVIPTSFKKAVGQFQPMFKGFQQHDSSELITFLLDGL-HEDLN-RVKKKP 487
Query: 338 ------------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
S N ++ NQ + VD + GQ ST++C C S ++PF
Sbjct: 488 YVESKDNQGKPDFEVAKESWQNHLARNQS-IIVD-LMHGQYKSTLKCPTCSQISITFDPF 545
Query: 380 LDLSLPVPTKKAPS 393
L L +P+KK S
Sbjct: 546 LTCGLSIPSKKLKS 559
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 62/160 (38%), Gaps = 35/160 (21%)
Query: 906 KIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF--------SEIINL 957
KI K A K + I KA IL LKRF + KL V+F I+N
Sbjct: 879 KICKEHVQAFKSMQIYKASDILIFTLKRFKASSGFFKQKLETFVDFPVKGLDLTEFILNK 938
Query: 958 RPYMD----------------PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK 1001
+D DH Y L V H G M GGHY A+
Sbjct: 939 NRPLDYDKETQQKEMIEEEFPEKRDDHKKLIYDLFAVSNHFGGMGGGHYTAF-------- 990
Query: 1002 VKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
K + G WY+ D V EV ++++ AY+LFY++
Sbjct: 991 ---GKNHLNGKWYNFDDAQVNEVDEDQIITKSAYVLFYKR 1027
>gi|426249551|ref|XP_004018513.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Ovis
aries]
Length = 916
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 314 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 371
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 431 TLPLPLKK 438
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 756 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRGLNMSEFVCDPSAR 814
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK+ K WY+ D V
Sbjct: 815 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDDSNVSLACE 860
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 861 DQIVTKAAYVLFYQR 875
>gi|395854375|ref|XP_003799671.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Otolemur
garnettii]
Length = 915
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 112/239 (46%), Gaps = 30/239 (12%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----A 261
++++ + + VS D D + GL NLGNTCF NS +Q L + QL +YFLN
Sbjct: 237 SAQLHAMNNNVSEEDEDFKGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLE 296
Query: 262 ELTF-GPLTIA--LKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHEL 316
EL F PL + + + +A+ + +G I P F + A QF GYQQHDS EL
Sbjct: 297 ELNFRNPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQEL 356
Query: 317 LRCLLDGLCSEELAFRKRN---------SPSEGNGISSNQG------PVFVDYVFGGQIA 361
L LLDGL + +K+ P + + Q V VD F G
Sbjct: 357 LSFLLDGLHEDLNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFK 415
Query: 362 STVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
ST+ C +CG+ S ++PF LS+P+P + P + ++ +L K G+I
Sbjct: 416 STLVCPDCGNVSVTFDPFCYLSVPLPVSHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 474
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P IL IHLKRFS + +R +L L ++FSE + L+P +
Sbjct: 763 ATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVQFPIRDLDFSEFV-LKPQNESAP-- 819
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 820 -ELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 867
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 868 QIESKAAYVLFYQR 881
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ ++GS A GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSSLNSKLLKINGST---AAALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVE 195
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 196 LRNGKTAGRRTYHTRSQGDNGVSLVEEFRKTLCALWQGSQAAFSPESLFYVVWKIMPNFR 255
Query: 307 GYQQHDSHELLRCLLDGLCSE-----------ELAFRKRNSPSEGNGISSNQGPVFVDYV 355
GYQQ D+HE +R LLD L E + ++ + S G N V +
Sbjct: 256 GYQQQDAHEFMRYLLDHLHRELQGGFNGVSRSSVLLQENSGLSAGGRCCINGASTVVTAI 315
Query: 356 FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 316 FGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 349
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ ++ +P + +N Y L
Sbjct: 402 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCFLLEPENSRPENCLYDLAA 460
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E VLR +AYI
Sbjct: 461 VVVHHGSGVGSGHYTAY----------AAHE---GRWFHFNDSTVTLTDEETVLRAKAYI 507
Query: 1037 LFY 1039
LFY
Sbjct: 508 LFY 510
>gi|345787400|ref|XP_003432923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Canis
lupus familiaris]
Length = 917
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 91/188 (48%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL AE+ PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 314 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 371
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 431 TLPLPLKK 438
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 756 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 814
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 815 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 852
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 853 SNVSLASEDQIVTKAAYVLFYQR 875
>gi|428166280|gb|EKX35258.1| hypothetical protein GUITHDRAFT_79938, partial [Guillardia theta
CCMP2712]
Length = 347
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDN 970
K ATKR +++AP +L +HLKRF G KL+ HV F + + L PYM G +
Sbjct: 229 KTRATKRFSVHRAPLVLQLHLKRFETSWSGNSCKLSKHVMFEQTLQLDPYMSEG--EKAG 286
Query: 971 YDYRLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
Y L GVV H G +M+ GHY A+V+ GVWY D VR+VS V
Sbjct: 287 SRYNLYGVVVHSGHSMKSGHYYAFVKNS------------NGVWYEMDDDSVRQVSYSAV 334
Query: 1030 LRCEAYILFY 1039
R +AY+LFY
Sbjct: 335 ARQQAYMLFY 344
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT----------FGPLTIALKKLFAETK 280
GL N+GNTCF N+V+Q L L + E + F L + + ++
Sbjct: 38 GLLNVGNTCFCNAVLQCLTYTPPLANLCKAQEHSKRITRDGQGKFDALKEVERHIITSSR 97
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF-RKRNSPSE 339
G V+ P + + + +Q D+HE R L++ + +LA R SP
Sbjct: 98 CTQG---VLKPSNIVNSFRKIGARLRLGRQEDAHEFTRLLMEAMHLADLAACRFTESP-- 152
Query: 340 GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA 391
S V +FGG + S VRC C ++S Y+ FLDLSL + KKA
Sbjct: 153 ---YSRAAQTGLVHGIFGGHLRSQVRCETCRYNSNTYDAFLDLSLEI--KKA 199
>gi|348553561|ref|XP_003462595.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 1
[Cavia porcellus]
Length = 956
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 90/182 (49%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFL+ EL F PL + L + +A+ +T
Sbjct: 301 GLTNLGNTCFMNSALQCLSNVPQLTEYFLDNRYLEELNFRNPLGMRGELAEAYADLVKQT 360
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 361 WSGCHRSIVPNVFKNKVGRFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 420
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 421 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 479
Query: 387 PT 388
P
Sbjct: 480 PV 481
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P IL IHLKRFS + + +L L ++FSE + ++P + +
Sbjct: 805 ATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTLVHFPIRDLDFSEFV-IKPQNE---SA 860
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 861 PELYKYDLIAVSNHYGGIRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 909
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 910 QIESKAAYVLFYQR 923
>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 2-like, partial [Anolis carolinensis]
Length = 666
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 89/189 (47%), Gaps = 37/189 (19%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-------------FGPLTIALKKLFA 277
GL NLGNTCF NS++Q L +L+DY L + ++ L+
Sbjct: 328 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYVRDLNNNSRMQMNLMAEFAKLIQALWT 387
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
+ E+ ++P F I AP+F GY Q D+ E LR LLDGL SE R P
Sbjct: 388 SSPNES-----VSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRILVR--P 440
Query: 338 SEGNGISSNQGP-------VFVDYV----------FGGQIASTVRCVECGHSSTVYEPFL 380
G+ S + P +++ Y+ F GQ+ S++ C CGH ST ++PF
Sbjct: 441 KGGSSDSLDHLPDEEKGRQMWMRYLAREDSRIGDLFVGQLKSSLTCSVCGHCSTAFDPFW 500
Query: 381 DLSLPVPTK 389
DLSLP+ K
Sbjct: 501 DLSLPIAKK 509
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + TK+ I + P IL +HLKRFS+ AR R SKL VNF + ++LR + C
Sbjct: 541 KARTKCTKKFSIQRFPKILVLHLKRFSE-ARIRSSKLTTFVNFPLKDLDLREFASQSC-- 597
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L V H GT GGHY AY K V G W+ +D V +S
Sbjct: 598 -NHAVYNLYAVSNHSGTTMGGHYTAYC-----------KNPVSGEWHAFNDSRVTPLSAS 645
Query: 1028 EVLRCEAYILFYE 1040
V +AY+LFYE
Sbjct: 646 HVRSSDAYLLFYE 658
>gi|301093923|ref|XP_002997806.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
gi|262109892|gb|EEY67944.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
Length = 770
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 31/158 (19%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY----MDPGC 965
V RDA+ ++ ++ P +L +H+KR AR R K+ H++F + +++ PY + G
Sbjct: 592 VLRDASMQLFVSALPRVLVVHIKRL---ARSR--KITQHISFRDKLDMTPYVSETLRQGG 646
Query: 966 TDHDNYD--YRLVGVVEHLGTMRGGHYVAYVRGGPKN------KVKAKKESVGG------ 1011
+ N+ Y L+ VV H+G R GHYVAYV + + +++ S G
Sbjct: 647 GEAKNHSLCYELIAVVVHMGNKRSGHYVAYVSRSRRREALLLARARSRLASEEGATVPDV 706
Query: 1012 --------VWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
WY+ SD V+ VS E+VL+CEAY+L Y++
Sbjct: 707 TTPRSAERTWYYVSDTVVKRVSFEQVLQCEAYMLLYQR 744
>gi|197099624|ref|NP_001125307.1| ubiquitin carboxyl-terminal hydrolase 4 [Pongo abelii]
gi|75055118|sp|Q5RCD3.1|UBP4_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|55727639|emb|CAH90574.1| hypothetical protein [Pongo abelii]
Length = 963
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDVVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 803 KKHQQATKKSDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|403291354|ref|XP_003936760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Saimiri
boliviensis boliviensis]
Length = 941
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 281 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRINPL--GMKGEIAEAYAELIK 338
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 339 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 396
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 397 ELKDANGRPDSVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECFKVSVTFDPFCYL 455
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 456 TLPLPLKK 463
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 781 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNQSAR 839
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 840 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 877
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 878 SNVSLASEDQIVTKAAYVLFYQR 900
>gi|395516301|ref|XP_003762329.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Sarcophilus
harrisii]
Length = 1379
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF AE+ + G L I L
Sbjct: 553 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFEAEINYSNPLGTGGRLAIGFAVLLRAL 612
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 613 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 668
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E + F+ +F GQ S + C C S ++PFL L
Sbjct: 669 ETVDSDGRPDEVVAQEAWQRHKMRNDSFIVDLFHGQYKSKLVCPVCSKVSITFDPFLYLP 728
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 729 VPLPQKQ 735
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++++ + P +L I LKRFS + K+N V F ++L + D
Sbjct: 1145 KQHREASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVEFPLRNLDLSKFCIGQKDD 1204
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY AY R P +K +++ VG W D V V
Sbjct: 1205 RQLPTYDLYAVINHYGGMIGGHYTAYAR-LPSDK-NSQRSDVG--WRLFDDSTVTTVDES 1260
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1261 QVVTRYAYVLFYRR 1274
>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
Length = 357
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 22/181 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L + + AL FA +
Sbjct: 20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 79
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ + ++P F I AP+F GY Q D+ E LR LLDGL E + R R +
Sbjct: 80 SSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANADTL 139
Query: 341 NGISSNQGP--VFVDY----------VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y +F GQ+ S++ C ECG+ ST ++PF DLSLP+P
Sbjct: 140 DHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPK 199
Query: 389 K 389
K
Sbjct: 200 K 200
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + TK+ I K P IL +HLKRFS+ AR R SKL VNF + ++LR + C
Sbjct: 232 KARTRCTKKFSIQKFPKILVLHLKRFSE-ARIRASKLTTFVNFPLKDLDLREFASQSC-- 288
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L V H GT GGHY AY K + W+ +D V +S
Sbjct: 289 -NHAVYNLYAVSNHSGTTMGGHYTAYC-----------KSPISSEWHSFNDSRVTPMSSS 336
Query: 1028 EVLRCEAYILFYE 1040
V +AY+LFYE
Sbjct: 337 HVRSSDAYLLFYE 349
>gi|332215938|ref|XP_003257098.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Nomascus leucogenys]
Length = 963
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------ 333
+G + PR F + APQF GYQQ DS ELL LLDGL + +K
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLEL 420
Query: 334 RNSPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+++ + + + + V VD F G ST+ C EC S ++PF L+L
Sbjct: 421 KDASGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLTL 479
Query: 385 PVPTKK 390
P+P KK
Sbjct: 480 PLPLKK 485
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|312379362|gb|EFR25660.1| hypothetical protein AND_08805 [Anopheles darlingi]
Length = 1136
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 107/235 (45%), Gaps = 58/235 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNL--------------------------LAMSQLQDYFLN-- 260
VRGLANL NTCFFN+V+Q L L ++ D L+
Sbjct: 275 VRGLANLRNTCFFNAVLQCLARTPYLLPILQQSAVEGERVTIPGGVLRLADGTDTILSPI 334
Query: 261 -AEL-TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLR 318
EL T+ LT AL L AE +G V+ P+ + SK PQF G QHDSHELLR
Sbjct: 335 EGELDTWRSLTDALASLLAEMT--SGADGVLTPKRLLHELTSKWPQFDGGDQHDSHELLR 392
Query: 319 CLLDGLCSEELAFRK---------------------RNSPSEGNGISSNQGPVFVDYVFG 357
LL+ + +++L + R + + G +Q + VF
Sbjct: 393 HLLESVRTDDLRRYQVLILQSLGLDKRKNQQNVDETRKAMVKFYGEQISQWVFRPEQVFR 452
Query: 358 GQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKS 412
G + ST+ C +C ++S+ +E FLD+SLPV +K QP R K + P +S
Sbjct: 453 GSLVSTLTCQDCHNTSSRHEYFLDISLPVCVEKP-----QPPVRRKSSPEPQSQS 502
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 15/124 (12%)
Query: 887 QLVAGNCESE-ESKVEEINSKIVK-VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSK 944
+L+ GN + ++ E IN K K VK +ATK+ LI+ P +L +HLKRF RG K
Sbjct: 780 ELMTGNNKVTCDACTERINGKGGKDVKTNATKQYLISVPPAVLILHLKRFQAGLRGMSRK 839
Query: 945 LNGHVNFSEIINLRPY----------MDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYV 994
L V F ++++ P+ + PG Y L G+VEH G+M GGHYVAYV
Sbjct: 840 LTKPVAFPFVLDIAPFCGSKVKRAAHIRPG---QKKILYALYGIVEHSGSMHGGHYVAYV 896
Query: 995 RGGP 998
+ P
Sbjct: 897 KVRP 900
>gi|55727816|emb|CAH90661.1| hypothetical protein [Pongo abelii]
Length = 931
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 278 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 337
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 338 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 397
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 398 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 456
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 457 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 490
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P D +
Sbjct: 779 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQND---S 833
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 834 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 882
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 883 NQIESKAAYVLFYQR 897
>gi|410951167|ref|XP_003982271.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Felis
catus]
Length = 917
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 314 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 371
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 431 TLPLPLKK 438
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 756 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 814
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 815 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 852
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 853 SNVSLASEDQIVTKAAYVLFYQR 875
>gi|359473972|ref|XP_002279130.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Vitis
vinifera]
Length = 1013
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 91/192 (47%), Gaps = 42/192 (21%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAELTFGPLTIALK 273
+ GL NLGNTCF NS +Q L+ + +YFL N EL F L+
Sbjct: 393 LAGLQNLGNTCFMNSAIQCLVHTPPIFEYFLQDYTEEINKQNPLGMNGELAFA-FGELLR 451
Query: 274 KLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK 333
KL++ R + PR+F G + APQF GY QHDS ELL LLDGL E+L R
Sbjct: 452 KLWSSG------RTPVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN-RV 503
Query: 334 RNSP----SEGNG-------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVY 376
+ P + NG + + VD V GQ ST+ C C S +
Sbjct: 504 KQKPYIETKDSNGRPDEEVADECWRNHKARNDSLIVD-VCQGQYKSTLVCPVCSKISITF 562
Query: 377 EPFLDLSLPVPT 388
+PF+ LSLP+P+
Sbjct: 563 DPFMYLSLPLPS 574
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R ATK++ + + P IL HLKRFS +R +KL+ VNF ++L Y+
Sbjct: 873 KEHRQATKKLDLWRLPDILVFHLKRFSY-SRYLKNKLDTLVNFPIHSLDLSQYVKCKDAS 931
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L + H G + GGHY AY + +N+ WYH D +V V
Sbjct: 932 SQSHVYELYAISNHYGGLGGGHYSAYAKLIDENR-----------WYHFDDSHVSPVGES 980
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY+++
Sbjct: 981 EIKTSAAYVLFYQRV 995
>gi|55728896|emb|CAH91186.1| hypothetical protein [Pongo abelii]
Length = 920
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 267 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 326
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 327 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 386
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 387 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 445
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 446 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 479
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P D +
Sbjct: 768 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQND---S 822
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 823 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 871
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 872 NQIESKAAYVLFYQR 886
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 121 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 176
Query: 259 LNAELTFGPLT----------IALKKLFAETKPET--GLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 177 LRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 236
Query: 307 GYQQHDSHELLRCLLDGLCSE----------ELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L E ++ ++ S N N V +F
Sbjct: 237 GYQQQDAHEFMRYLLDHLHLELQGGFNGVPRSSILQENSTLSANNKCCINGASTVVTAIF 296
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 297 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 329
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P ++ Y L
Sbjct: 382 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAA 440
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 441 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTVTDEETVGKAKAYI 487
Query: 1037 LFY 1039
LFY
Sbjct: 488 LFY 490
>gi|395546304|ref|XP_003775029.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Sarcophilus harrisii]
Length = 935
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + L +YFL+ EL F PL + + + +A+ +
Sbjct: 218 GLTNLGNTCFMNSALQCLSNVPPLTEYFLHNHYLKELNFCNPLGMKGEIAEAYADLVKQA 277
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
+G + PR F + A QF GYQQHDS ELL LLDGL E+L K+ E
Sbjct: 278 WSGHHRSVVPRMFKTKVGHFASQFLGYQQHDSQELLSFLLDGL-HEDLNRVKKKEYVELR 336
Query: 342 GIS----------------SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ V VD F G ST+ C ECG S ++PF LS+P
Sbjct: 337 DAAGRPDQEVADEAWRNHKRRNDSVIVD-TFHGLFKSTLVCPECGKVSVTFDPFCYLSVP 395
Query: 386 VPTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
+P K + P + ++ +L K+G++
Sbjct: 396 LPVSKERGMEVFFVSMDPRRKPEQHRLVVPKAGKV 430
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 25/136 (18%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSE-IINLRPYMDPGC 965
ATK++ + P L IHLKRFS R KL+ V +FSE II R DP
Sbjct: 780 ATKKLDLGALPEALIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFIIKPRTEADPTP 838
Query: 966 TDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
+D L+ V H G +R GHY + R K+S G W++ D V VS
Sbjct: 839 CKYD-----LIAVSNHYGGLRDGHYTTFARN---------KDS--GQWHYFDDSSVSPVS 882
Query: 1026 LEEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 883 ESQIESKAAYVLFYQR 898
>gi|380798193|gb|AFE70972.1| ubiquitin carboxyl-terminal hydrolase 11, partial [Macaca mulatta]
Length = 904
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 251 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 310
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 311 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 370
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 371 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 429
Query: 387 P 387
P
Sbjct: 430 P 430
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 752 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 806
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 807 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 855
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 856 NQIESKAAYVLFYQR 870
>gi|297285790|ref|XP_002802844.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Macaca
mulatta]
Length = 935
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 275 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 332
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 333 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 390
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 391 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 449
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 450 TLPLPLKK 457
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 775 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNPSAR 833
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 834 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 871
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 872 SNVSLASEDQIVTKAAYVLFYQR 894
>gi|291225440|ref|XP_002732713.1| PREDICTED: ubiquitin specific protease 8-like [Saccoglossus
kowalevskii]
Length = 1150
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 37/194 (19%)
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--------LNAELTFG-------P 267
GN + GL NLGNTCF NS++Q+L + L YF +N E G
Sbjct: 802 GNQGRALTGLKNLGNTCFMNSIIQSLANSTPLATYFIEGSYKYHINRENKLGRGGKVAEE 861
Query: 268 LTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE 327
+ + ++ +G I+PR F + PQF GY+Q DS E L LLDGL +
Sbjct: 862 FAVVINAIW------SGHYRSISPRDFKLTVSKFVPQFAGYEQQDSQEFLLFLLDGLHED 915
Query: 328 --ELAFRKRNSPSEGNGISSNQGP-------------VFVDYVFGGQIASTVRCVECGHS 372
+ RK + ++ +Q + V+ +F GQ ST++C+ C
Sbjct: 916 LNRVKHRKYIEEKDNTHLTDDQAAQLAWNNHKRLNESIMVE-LFQGQFKSTLQCLFCQKK 974
Query: 373 STVYEPFLDLSLPV 386
S Y+ F+ LSLP+
Sbjct: 975 SVTYDAFMYLSLPL 988
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 63/139 (45%), Gaps = 24/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
KV R+A KR+ I K P IL IHLKRFS + R KL V+F P + + H
Sbjct: 1021 KVHREANKRIEIWKLPHILLIHLKRFSYEGVWR-HKLQTDVDF-------PINNLDMSSH 1072
Query: 969 -----DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVRE 1023
Y L V H GTM GGHY A+ KN ++ K WY D V E
Sbjct: 1073 VIGPKKRSSYNLYAVSNHYGTMDGGHYTAFC----KNAIRQK-------WYKFDDTEVYE 1121
Query: 1024 VSLEEVLRCEAYILFYEKI 1042
+ V AYILFY I
Sbjct: 1122 MPTRNVKSSAAYILFYTSI 1140
>gi|23503563|dbj|BAC20463.1| deubiquitinating enzyme [Homo sapiens]
Length = 921
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 268 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 327
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 328 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 387
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 388 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 446
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 447 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 480
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 769 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 823
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 824 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 872
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 873 NQIESKAAYVLFYQR 887
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 33/194 (17%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF 265
NS + S+ V+GS GL NLGNTCF N+++Q+L ++ + F
Sbjct: 381 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLRSLVE----------EF 426
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL- 324
AL + G + +P S F + P F+GYQQ D+HE +R LLD L
Sbjct: 427 RKTLCALWQ---------GSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 477
Query: 325 ---------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTV 375
S ++ ++ S N N V +FGG + + V C+ CG S
Sbjct: 478 LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRK 537
Query: 376 YEPFLDLSLPVPTK 389
++PFLDLSL +P++
Sbjct: 538 FDPFLDLSLDIPSQ 551
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 604 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 662
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 663 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 709
Query: 1037 LFY 1039
LFY
Sbjct: 710 LFY 712
>gi|449543789|gb|EMD34764.1| hypothetical protein CERSUDRAFT_116959 [Ceriporiopsis subvermispora
B]
Length = 1096
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 81/195 (41%), Gaps = 62/195 (31%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDAR-------GRLSKLNGHVNFSEIINLRPYMD 962
V R KR LI PPIL +HLKRF Q ++ G KL+ V F E ++L P++
Sbjct: 902 VLRRTYKRYLIAVPPPILVVHLKRFHQVSKSHSVTLTGGFKKLDEFVAFPEYLDLTPFLA 961
Query: 963 P-----------GCTDHDNYD---------YRLVGVVEHLGTMRGGHYVAYVR------- 995
P G +H YRL VV H+G M GGHYVAY
Sbjct: 962 PRKEDYGLGHAKGKAEHGKEQKEREPEPCMYRLYAVVVHIGNMLGGHYVAYTALPPSSPS 1021
Query: 996 -------------------GGPKNKVKAKKESVGGV---------WYHASDVYVREVSLE 1027
PK V+ KES G W + SD VR +++
Sbjct: 1022 SAVPNPETVGKEGSPSAYPASPKLSVQQSKESTEGAQKPAKRQRQWAYISDTVVRLTTID 1081
Query: 1028 EVLRCEAYILFYEKI 1042
EVL+ +AYI YE+I
Sbjct: 1082 EVLKAKAYICMYERI 1096
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 90/250 (36%), Gaps = 94/250 (37%)
Query: 226 CYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKK-----LFAETK 280
++ GL N GNTCF NS +Q L+A L + +TF P+ L+K + A
Sbjct: 27 AHLPPGLINHGNTCFMNSTLQGLMATELLHNL-----ITFEPVPPNLQKSTGSSIIARRS 81
Query: 281 PET----GL---------------------------------RNVINPRSFFGCICSKAP 303
P+ GL R ++P+ I K
Sbjct: 82 PQLTNGHGLGGQYERARVEGMPLGDIFIQTMQKAWSMQDSRQRGSMSPKDILMAIGRKYD 141
Query: 304 QFKGYQQHDSHELLRCLLDGLCSEELAF------------RKRNSPSEGNGISSNQGP-- 349
Q+ ++Q D+HE LR +LD + EEL RKR+ P +S P
Sbjct: 142 QYLDFRQQDAHEFLRHMLDAMRMEELDIIKQRLPPPPKEKRKRSRPKASPATASTPEPQD 201
Query: 350 ---------------------------------VFVDYVFGGQIASTVRCVECGHSSTVY 376
FVD +FGG++AS + C +C S Y
Sbjct: 202 PSARASTSSPALPQQPDGLSSPSIAPSDDEKLESFVDMLFGGRLASILVCEKCKKVSLTY 261
Query: 377 EPFLDLSLPV 386
E F DLSL +
Sbjct: 262 EDFNDLSLSI 271
>gi|119579693|gb|EAW59289.1| ubiquitin specific peptidase 11, isoform CRA_b [Homo sapiens]
gi|168277940|dbj|BAG10948.1| ubiquitin carboxyl-terminal hydrolase 11 [synthetic construct]
Length = 920
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 267 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 326
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 327 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 386
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 387 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 445
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 446 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 479
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 768 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 822
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 823 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 871
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 872 NQIESKAAYVLFYQR 886
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 29/188 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN---AEL---------TF-----GPLTIALK 273
GL NLGNTCF N+++Q+L + Q YF EL T+ G + ++L
Sbjct: 107 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNVSLV 166
Query: 274 KLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL------- 324
+ F +T G + +P S F + P F+GYQQ D+HE +R LLD L
Sbjct: 167 EEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGE 226
Query: 325 ---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
S + + S S N N V VFGG + + V C+ CG S ++PFLD
Sbjct: 227 FDGSSHSVLSQANCSRSASNKCCINGASTVVTSVFGGVLQNEVNCLICGTESRKFDPFLD 286
Query: 382 LSLPVPTK 389
LSL +P++
Sbjct: 287 LSLDIPSQ 294
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V+F ++++ + ++P ++ Y L
Sbjct: 347 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLAA 405
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY + G W+H +D V E V + +AYI
Sbjct: 406 VVVHHGSGVGSGHYTAYA-------------THKGRWFHFNDSTVTLTEEETVAKAKAYI 452
Query: 1037 LFY 1039
LFY
Sbjct: 453 LFY 455
>gi|355746701|gb|EHH51315.1| hypothetical protein EGM_10667, partial [Macaca fascicularis]
Length = 889
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 229 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 286
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 287 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 344
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 345 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 403
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 404 TLPLPLKK 411
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 729 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNPSAR 787
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 788 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 825
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 826 SNVSLASEDQIVTKAAYVLFYQR 848
>gi|348502347|ref|XP_003438729.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Oreochromis niloticus]
Length = 506
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 149/359 (41%), Gaps = 48/359 (13%)
Query: 50 CPHLDK-GIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIW 108
CPH++ +D+ K ++++ + G + R +K K G+ L +
Sbjct: 6 CPHVNGFKVDNWKQNLRVIYQCFVW-----SGSAETRKRKAKSCICHMCGAHL---NRLH 57
Query: 109 VCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEE 168
CL C +AC + H+ HA+ RH L I + +CF C I ++ E+
Sbjct: 58 SCLYCVFFACFA-------KKHIHEHAKSKRHNLAIDLLYGGI-YCFMCQDYIYDKEMEQ 109
Query: 169 NGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYV 228
+ + + ++ I + + E I S T+
Sbjct: 110 IAKEEQRKAWKMQGIGEKYSTWEPTKRELELLRHNPKRRRITSNCTIG------------ 157
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AEL-TFGPLTIALKKLFAETKPET 283
+RGL NLGNTCF N ++Q L L+D+FL+ E+ + L + +LF E +
Sbjct: 158 LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSNSCLVCEMSQLFQEF--YS 215
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C ++ +K N+P+
Sbjct: 216 GHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNG-KKANNPNHC 274
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPA 399
N I +D +F G + S V C C ST +PF D+SL +P P P
Sbjct: 275 NCI--------IDQIFTGGLQSDVTCQACHGVSTTIDPFWDISLDLPGSSTPFWPLSPG 325
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 32/146 (21%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 371 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 429
Query: 962 ------DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYH 1015
DP ++DN Y L VV H GT+ GHY ++R W+
Sbjct: 430 QYQQTVDP--FNNDN-KYSLFAVVNHQGTLESGHYTTFIRQHKDQ------------WFK 474
Query: 1016 ASDVYVREVSLEEVLRCEAYILFYEK 1041
D + + S+++VL E Y+LFY K
Sbjct: 475 CDDAIITKASIKDVLDSEGYLLFYHK 500
>gi|342187290|ref|NP_001230117.1| ubiquitin specific peptidase 4 (proto-oncogene) [Sus scrofa]
Length = 963
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKISVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|326679111|ref|XP_689922.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Danio rerio]
Length = 1526
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 86/187 (45%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAEL-------TFGPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF +E+ T G L I L
Sbjct: 680 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRGFESEINCNNPLGTGGRLAIGFAVLLRAL 739
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-S 338
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P +
Sbjct: 740 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 795
Query: 339 EGNGISSNQGPV---------------FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E Q V F+ +F GQ S + C C S ++PFL L
Sbjct: 796 ETVDSDGRQDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPMCSKVSITFDPFLYLP 855
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 856 VPLPQKQ 862
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDN- 970
R+A+K++L+ + P +L I LKRFS + K+N V+F + NL + C H
Sbjct: 1275 REASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFP-VRNLD--LSKFCIGHKGD 1331
Query: 971 ----YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y L V+ H G M GGHY AY R P +K ++ VG W D V V
Sbjct: 1332 IQQPPIYDLYAVINHYGGMIGGHYTAYAR-LPSDK-NSQLSDVG--WRLFDDSTVTTVEE 1387
Query: 1027 EEVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1388 SQVVTRYAYVLFYRR 1402
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSPTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y+ +P + +N Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY A+ A E G W+H +D V E VL+ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAF----------ATHE---GRWFHFNDSTVTLTDEETVLKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|432092405|gb|ELK25020.1| Ubiquitin carboxyl-terminal hydrolase 4 [Myotis davidii]
Length = 901
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 240 GLGNLGNTCFMNSALQCLSNTAPLTDYFLRDEYEAEINRDNPL--GMKGEIAEAYAELIK 297
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 298 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 355
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 356 ELQDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 414
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 415 TLPLPLKK 422
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS R KL+ V F +N+ ++ DP
Sbjct: 740 KRHQQATKKFDLWSLPKILVVHLKRFSYSRYWR-DKLDTVVEFPVRGLNMSEFVCDPSAR 798
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY A+ KNK+ K WY+ D V S
Sbjct: 799 P---YVYDLIAVSNHYGAMGVGHYTAHA----KNKLNGK-------WYYFDDSNVSLASE 844
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 845 DQIVTKAAYVLFYQR 859
>gi|296235360|ref|XP_002807922.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Callithrix jacchus]
Length = 927
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 274 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 333
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 334 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 393
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 394 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 452
Query: 387 P 387
P
Sbjct: 453 P 453
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 775 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNE---S 829
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 830 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 878
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 879 NQIESKAAYVLFYQR 893
>gi|193785704|dbj|BAG51139.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 54 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 109
Query: 259 LNAELTFGPLT----------IALKKLFAETKPET--GLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 110 LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 169
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 170 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 229
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 230 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 262
>gi|194221320|ref|XP_001498012.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Equus
caballus]
Length = 963
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 802 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRGLNMSEFVCDLSAR 860
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 861 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 898
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S E+++ AY+LFY++
Sbjct: 899 SNVSLASEEQIVTKAAYVLFYQR 921
>gi|39795322|gb|AAH63668.1| USP11 protein, partial [Homo sapiens]
Length = 923
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 270 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 329
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 330 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 389
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 390 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 448
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 449 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 482
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 771 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 825
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 826 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 874
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 875 NQIESKAAYVLFYQR 889
>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
Length = 465
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 201 GSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN 260
G G + + S VV G + GL NLGNTCF NS++Q L +L+DY L
Sbjct: 108 GYGGTHGPDPTSSKVVQG----------LTGLGNLGNTCFMNSILQCLSNTKELRDYCLQ 157
Query: 261 AELTF-----GPLTIALKKLFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHD 312
+ + AL FA + + + ++P F I AP+F GY Q D
Sbjct: 158 NQYLRDLNNNSRMRTALMSEFAKLIQLLWTSSPNHSVSPSEFKTQIQRYAPRFVGYNQQD 217
Query: 313 SHELLRCLLDGLCSE--ELAFRKRNSPSEGNGISSNQGP--VFVDY----------VFGG 358
+ E LR LLDGL E + R R + + + ++ ++ Y +F
Sbjct: 218 AQEFLRFLLDGLHGEVNRVLVRPRANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVA 277
Query: 359 QIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
Q+ S++ C ECG+ ST ++PF DLSLP+P K
Sbjct: 278 QLKSSLTCSECGYCSTAFDPFWDLSLPIPKK 308
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + TK+ I K P IL +HLKRFS+ AR R SKL VNF + ++LR + C
Sbjct: 340 KARTRCTKKFSIQKFPKILVLHLKRFSE-ARIRASKLTTFVNFPLKDLDLREFASQSC-- 396
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L V H G GGHY AY K + W+ +D V +S
Sbjct: 397 -NHAVYNLYAVSNHSGATMGGHYTAYC-----------KSPISSEWHSFNDSRVTPMSSS 444
Query: 1028 EVLRCEAYILFYE 1040
V +AY+LFY+
Sbjct: 445 HVPTSDAYLLFYD 457
>gi|114586836|ref|XP_001163445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 8 [Pan
troglodytes]
gi|397495141|ref|XP_003818419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Pan
paniscus]
gi|410227908|gb|JAA11173.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259864|gb|JAA17898.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289716|gb|JAA23458.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353791|gb|JAA43499.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 962
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 802 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 860
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 861 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 898
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 899 SNVSLASEDQIVTKAAYVLFYQR 921
>gi|332215940|ref|XP_003257099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Nomascus leucogenys]
Length = 916
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------ 333
+G + PR F + APQF GYQQ DS ELL LLDGL + +K
Sbjct: 314 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLEL 373
Query: 334 RNSPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+++ + + + + V VD F G ST+ C EC S ++PF L+L
Sbjct: 374 KDASGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLTL 432
Query: 385 PVPTKK 390
P+P KK
Sbjct: 433 PLPLKK 438
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 756 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 814
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 815 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 852
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 853 SNVSLASEDQIVTKAAYVLFYQR 875
>gi|62898145|dbj|BAD97012.1| ubiquitin specific protease, proto-oncogene isoform a variant [Homo
sapiens]
Length = 963
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|449459070|ref|XP_004147269.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Cucumis
sativus]
Length = 940
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 98/201 (48%), Gaps = 41/201 (20%)
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF---LNAELTF-------G 266
SG G++C + GL NLGNTCF NS +Q L+ + YF + E+ + G
Sbjct: 311 SGVSTRGSSCGLT-GLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHQEINWQNPLGMVG 369
Query: 267 PLTIA----LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLD 322
L +A L+KL+A R + PR F + APQF GY QHDS ELL LLD
Sbjct: 370 ELAMAFGDLLRKLWAPG------RTSVAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLD 423
Query: 323 GLCSEEL-------AFRKRNS---PSE-------GNGISSNQGPVFVDYVFGGQIASTVR 365
GL E+L + R++ P E N I+ N + VD V GQ ST+
Sbjct: 424 GL-HEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDS-IIVD-VCQGQYKSTLV 480
Query: 366 CVECGHSSTVYEPFLDLSLPV 386
C C S ++PF+ LSLP+
Sbjct: 481 CPVCNKVSVTFDPFMYLSLPL 501
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K +R A+K++ + + P +L IHLKRFS +R KL VNF P D T++
Sbjct: 800 KERRQASKKLDLWRLPEVLVIHLKRFSY-SRSMKHKLETFVNF-------PIHDFDLTNY 851
Query: 969 -------DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
Y L + H G+M GHY A+++ +N+ WY D ++
Sbjct: 852 VANKNNSQRQLYELYALTNHYGSMGSGHYTAHIKLIDENR-----------WYSFDDSHI 900
Query: 1022 REVSLEEVLRCEAYILFYEKI 1042
++ EEV AY+LFY ++
Sbjct: 901 SLINEEEVKSAAAYVLFYRRV 921
>gi|395516315|ref|XP_003762336.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 4 [Sarcophilus harrisii]
Length = 989
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 323 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKNEYEAEINRDNPL--GMKGEIAEAYAELIK 380
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 381 QMWSGRNTQVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 438
Query: 338 --SEGNGISS-------------NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG V VD F G ST+ C EC S ++PF L
Sbjct: 439 ELKDANGRPDLVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECSKISVTFDPFCYL 497
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 498 TLPLPLKK 505
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +++ ++ DP
Sbjct: 828 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRDLHMSEFVCDPAAG 886
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK+ K WY+ D V S
Sbjct: 887 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDDSNVSLASE 932
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 933 DQIVTKAAYVLFYQR 947
>gi|395326677|gb|EJF59084.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1201
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 91/193 (47%), Gaps = 36/193 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF-----------LNAELTFGPLTIALKKLFAET 279
GL NLGNTC+ NS +Q L A +F +N T G L +A + +
Sbjct: 845 GLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMVNPMGTKGVLALAFANILRDM 904
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEEL--AFRKRNSP 337
G ++P +F ICS APQF G +QHDS E L LLDGL E+L +KRN
Sbjct: 905 --WQGEGGTLSPVTFRRSICSHAPQFSGSEQHDSQEFLSFLLDGL-HEDLNRILQKRNIE 961
Query: 338 SE----------GNGISSNQ---------GPVFVDYVFGGQIASTVRCVECGHSSTVYEP 378
S I+S Q + VD+ F GQ + + C+ C +ST Y
Sbjct: 962 STPEREAELEKLPTQIASEQEWQIYRMRDDSLIVDF-FQGQYRNRMECLTCHKTSTTYNT 1020
Query: 379 FLDLSLPVPTKKA 391
F+ L+LP+PT +A
Sbjct: 1021 FMYLTLPIPTGRA 1033
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 39/154 (25%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLS-KLNGHVNFS-EIINLRPYM----- 961
K R ATK++ +++ PP+L IHLKRFS A+G + K+ V F + ++L YM
Sbjct: 1063 KALRKATKQLSLSRLPPVLLIHLKRFS--AKGPFTDKIETFVEFPLKGLDLTNYMPPPLP 1120
Query: 962 ------------DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYV--RGGPKNKVKAKKE 1007
DP C Y Y L V H GT+ GHY A++ RGG
Sbjct: 1121 PGAIGVPPLSPDDPRC-QLPPYRYDLYAVTNHFGTLSTGHYTAFIASRGG---------- 1169
Query: 1008 SVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
W + D V ++V+ AYILFY++
Sbjct: 1170 -----WLYCDDSRVTPADAKDVVGKPAYILFYKR 1198
>gi|40795665|ref|NP_003354.2| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Homo sapiens]
gi|116242839|sp|Q13107.3|UBP4_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein homolog
gi|2656141|gb|AAC27355.1| UnpEL [Homo sapiens]
gi|115527981|gb|AAI25131.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
gi|119585375|gb|EAW64971.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|119585376|gb|EAW64972.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|158257022|dbj|BAF84484.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|90075590|dbj|BAE87475.1| unnamed protein product [Macaca fascicularis]
Length = 812
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 267 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 326
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 327 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 386
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 387 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 445
Query: 387 P 387
P
Sbjct: 446 P 446
>gi|449456269|ref|XP_004145872.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Cucumis
sativus]
Length = 915
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 103/226 (45%), Gaps = 34/226 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFG---PLTIALKKLFAETK 280
GL NLGNTCF NS +Q L+ L +YFL NAE G L I +L K
Sbjct: 321 GLQNLGNTCFMNSALQCLVHTPPLVEYFLQDYSEEINAENPLGMHGELAIVFGELL--RK 378
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
+G + I PR F G + APQF GY QHDS ELL LLDGL E+L KR E
Sbjct: 379 LWSG-QTTIAPRVFKGKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNRVKRKPYFET 436
Query: 341 NGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ + VD V GQ ST+ C C S ++PF+ LSL
Sbjct: 437 KDSDGRPDVEVADECWRYHKARNDSLIVD-VCQGQYKSTLVCPVCEKISITFDPFMYLSL 495
Query: 385 PVPTKKAPSKKTQPASRAKKTKLPPKKSGRIRAKG-TKD-THAVTT 428
P+P+ T + LP + ++ G TKD THA+ T
Sbjct: 496 PLPSTVT-RSVTVTVFYGDGSGLPMPYTVTVQRHGCTKDLTHALAT 540
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K R ATK++ + K P I+ HLKRFS +R +KL+ V+F I NL D
Sbjct: 793 KEHRQATKKLDLWKLPEIIVFHLKRFSY-SRYLKNKLDTFVDFP-IHNLDLSKYVKSNDG 850
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
+Y Y L + H G + GGHY AY + + K+ WYH D V V EE
Sbjct: 851 KSYLYNLYAISNHYGGLGGGHYTAYAK-----LIDEKR------WYHFDDSQVSPVGEEE 899
Query: 1029 VLRCEAYILFYEKI 1042
+ AY+LFY+++
Sbjct: 900 IKTSAAYLLFYQRV 913
>gi|118404614|ref|NP_001072879.1| ubiquitin specific peptidase 19 [Xenopus (Silurana) tropicalis]
gi|116487747|gb|AAI25669.1| hypothetical protein MGC145127 [Xenopus (Silurana) tropicalis]
Length = 1435
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF + T G L ++ L
Sbjct: 627 GLVNLGNTCFMNSVIQSLSNTRELRDYFQDRSFESEINCNNPLGTGGRLAVSFAVLLRAL 686
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 687 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPY- 741
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P FV +F GQ S + C C S ++PFL L
Sbjct: 742 TETVDSDGRPDEEVADEAWLRHKMRNDSFVVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 801
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 802 PVPLPQKQ 809
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDN 970
R+A+K++++ + P IL I LKRFS K+N V+F ++L + DH
Sbjct: 1233 REASKQLMLWRLPNILIIQLKRFSFRTFIWRDKINDMVDFPVRNLDLSTFCIGQKEDHQR 1292
Query: 971 YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
Y L V+ H G M GGHY AY R N+ +++ VG W D V V +V+
Sbjct: 1293 PIYDLYAVINHYGGMIGGHYTAYARL--PNEKNSQRSDVG--WRLFDDSTVTTVDESQVV 1348
Query: 1031 RCEAYILFYEK 1041
AY+LFY +
Sbjct: 1349 TRYAYVLFYRR 1359
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 90/194 (46%), Gaps = 26/194 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y LN + T + AL K F++ E
Sbjct: 715 LNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHE 774
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE------------ 327
G V+N + I AP+F GY Q D+ E LR LL+GL +
Sbjct: 775 LWEVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 834
Query: 328 ----ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E+ + + ++ + VD VF GQ+ S++ C C H S +PF DLS
Sbjct: 835 TDIPEMYTDSQKAVESWKRYLRSEDSMIVD-VFVGQLRSSLHCTSCDHVSVTLDPFWDLS 893
Query: 384 LPVPTKKAPSKKTQ 397
LP+P + K +Q
Sbjct: 894 LPIPARSGTVKLSQ 907
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMD---PG 964
+++R TK I K P IL IHLKRFS R R SKLN V+F ++L + PG
Sbjct: 930 QMRRKCTKSFSIQKFPKILVIHLKRFSPMERFR-SKLNVMVDFPLTGLDLSAFAAPRVPG 988
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
CT Y L GV H GT GHY AY K W+ +D V V
Sbjct: 989 CT------YNLYGVANHSGTTHSGHYTAYC-----------KHPYSAEWHEYNDSRVSAV 1031
Query: 1025 SLEEVLRCEAYILFYEK 1041
V+ EAY+LFYE+
Sbjct: 1032 PARSVVSNEAYVLFYEQ 1048
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 90/194 (46%), Gaps = 26/194 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y LN + T + AL K F++ E
Sbjct: 647 LNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHE 706
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE------------ 327
G V+N + I AP+F GY Q D+ E LR LL+GL +
Sbjct: 707 LWEVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 766
Query: 328 ----ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E+ + + ++ + VD VF GQ+ S++ C C H S +PF DLS
Sbjct: 767 TDIPEMYTDSQKAVESWKRYLRSEDSMIVD-VFVGQLRSSLHCTSCDHVSVTLDPFWDLS 825
Query: 384 LPVPTKKAPSKKTQ 397
LP+P + K +Q
Sbjct: 826 LPIPARSGTVKLSQ 839
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMD---PG 964
+++R TK I K P IL IHLKRFS R R SKLN V+F ++L + PG
Sbjct: 862 QMRRKCTKSFSIQKFPKILVIHLKRFSPMERFR-SKLNVMVDFPLTGLDLSAFAAPRVPG 920
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
CT Y L GV H GT GHY AY K W+ +D V V
Sbjct: 921 CT------YNLYGVANHSGTTHSGHYTAYC-----------KHPYSAEWHEYNDSRVSAV 963
Query: 1025 SLEEVLRCEAYILFYEK 1041
V+ EAY+LFYE+
Sbjct: 964 PARSVVSNEAYVLFYEQ 980
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 92/200 (46%), Gaps = 31/200 (15%)
Query: 220 DLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-----------------LNAE 262
D +G GL NLGNTCF N+++Q+L + YF +
Sbjct: 153 DSEGALVQCATGLRNLGNTCFMNAILQSLSNIQVFSCYFKELPSVALRSGKTAGRRMYHT 212
Query: 263 LTFGPLTIALKKLFAETKPET--GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
+ G +++L + F +T G + +P + F I P F+GYQQ D+HE LR L
Sbjct: 213 RSQGDSSVSLVEEFRKTLCSLWQGSQTAFSPDALFYVIWKIMPSFRGYQQQDAHEFLRYL 272
Query: 321 LDGLCSEELAFRKRNSPS------EGNGISS-----NQGPVFVDYVFGGQIASTVRCVEC 369
LD L E+ K SPS E N S N V VFGG + + V C+ C
Sbjct: 273 LDHL-HREMQGNKNGSPSPPVTSDEPNHASESKCFINGTSTIVTSVFGGVLQNEVYCLIC 331
Query: 370 GHSSTVYEPFLDLSLPVPTK 389
G S ++PFLDLSL +P +
Sbjct: 332 GTESRKFDPFLDLSLDIPNQ 351
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 17/134 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYM-DPGCT 966
K ++ +TK+ I K P +L +HLKRF A R +K++ +V F ++++ Y+ +P +
Sbjct: 393 KKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLR-NKVDTYVEFPMCGLDMKSYLLEPENS 451
Query: 967 DHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
+ Y L VV H G+ G GHY AY R G WYH +D V VS
Sbjct: 452 LPERCLYDLAAVVVHHGSGIGSGHYTAYGRHE-------------GQWYHFNDSTVTLVS 498
Query: 1026 LEEVLRCEAYILFY 1039
E VL+ +AYILFY
Sbjct: 499 EEAVLKAKAYILFY 512
>gi|403297385|ref|XP_003939546.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Saimiri
boliviensis boliviensis]
Length = 923
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 270 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 329
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 330 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 389
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 390 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 448
Query: 387 P 387
P
Sbjct: 449 P 449
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 771 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNE---S 825
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 826 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 874
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 875 NQIESKAAYVLFYQR 889
>gi|363738688|ref|XP_003642052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Gallus
gallus]
Length = 1367
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF +E+ + G L I L
Sbjct: 594 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLLRAL 653
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 654 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 709
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E + F+ +F GQ S + C C S ++PFL L
Sbjct: 710 ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLP 769
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 770 VPLPQKQ 776
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++++ + P +L I LKRFS + K+N V+F ++L + +
Sbjct: 1198 KQHREASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGRKGE 1257
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY AY R N +++ VG W D V V
Sbjct: 1258 QQLPMYDLYAVINHYGGMIGGHYTAYARL--PNDKNSQRSDVG--WRLFDDSTVTTVDES 1313
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1314 QVVTRYAYVLFYRR 1327
>gi|338714892|ref|XP_003363165.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Equus caballus]
Length = 916
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 314 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 371
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 431 TLPLPLKK 438
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 755 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRGLNMSEFVCDLSAR 813
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 814 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 851
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S E+++ AY+LFY++
Sbjct: 852 SNVSLASEEQIVTKAAYVLFYQR 874
>gi|334333006|ref|XP_001370855.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Monodelphis domestica]
Length = 880
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 124/305 (40%), Gaps = 34/305 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E+
Sbjct: 416 CLYCVFFGC-------FTKKHIHEHAKTKRHNLAIDLLYGGI-YCFMCQDYIYDKDMEQI 467
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSE-IKSESTVVSGS----DLDGN 224
K+ + KL T +S G E K E ++ + + N
Sbjct: 468 A--KEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTN 525
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAE 278
+RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E
Sbjct: 526 CTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQE 585
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRN 335
+G R+ P + + A GY+Q D+HE L LD L C + +K N
Sbjct: 586 F--YSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 643
Query: 336 SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
+P+ N I +D +F G + S V C C ST +PF D+SL +P P
Sbjct: 644 NPNHCNCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWP 695
Query: 396 TQPAS 400
P S
Sbjct: 696 LSPGS 700
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 745 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 803
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R + K + W+ D
Sbjct: 804 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIR-------QHKDQ-----WFKCDD 851
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 852 AIITKASIKDVLDSEGYLLFYHK 874
>gi|355559641|gb|EHH16369.1| hypothetical protein EGK_11640 [Macaca mulatta]
gi|380788769|gb|AFE66260.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|383409701|gb|AFH28064.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|384942170|gb|AFI34690.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
Length = 963
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNPSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|343961659|dbj|BAK62419.1| ubiquitin carboxyl-terminal hydrolase 4 [Pan troglodytes]
Length = 907
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 248 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 305
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 306 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 363
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 364 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 422
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 423 TLPLPLKK 430
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 747 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 805
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 806 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 843
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 844 SNVSLASEDQIVTKAAYVLFYQR 866
>gi|115529049|gb|AAI25132.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
Length = 963
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLGCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|114586840|ref|XP_001163407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 7 [Pan
troglodytes]
gi|397495143|ref|XP_003818420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Pan
paniscus]
gi|410227906|gb|JAA11172.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259862|gb|JAA17897.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289714|gb|JAA23457.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353789|gb|JAA43498.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 915
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 314 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 371
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 431 TLPLPLKK 438
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 755 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 813
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 814 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 851
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 852 SNVSLASEDQIVTKAAYVLFYQR 874
>gi|40795667|ref|NP_955475.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Homo sapiens]
gi|2656143|gb|AAC27356.1| UnpES [Homo sapiens]
gi|119585373|gb|EAW64969.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
gi|119585377|gb|EAW64973.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
Length = 916
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 314 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 371
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 431 TLPLPLKK 438
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 756 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 814
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 815 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 852
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 853 SNVSLASEDQIVTKAAYVLFYQR 875
>gi|402860133|ref|XP_003894489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Papio anubis]
Length = 921
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 261 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 318
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 319 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 376
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 377 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 435
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 436 TLPLPLKK 443
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 761 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNPSAR 819
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 820 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 857
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 858 SNVSLASEDQIVTKAAYVLFYQR 880
>gi|354476435|ref|XP_003500430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cricetulus
griseus]
Length = 967
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 307 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 364
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 365 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 423
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + +G + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 424 PKDASGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 482
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 483 LPLPLKK 489
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 806 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRGLNMSEFVCDRSAR 864
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 865 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 902
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 903 SNVSLASEDQIVTKAAYVLFYQR 925
>gi|241705172|ref|XP_002413236.1| ubiquitin specific protease, putative [Ixodes scapularis]
gi|215507050|gb|EEC16544.1| ubiquitin specific protease, putative [Ixodes scapularis]
Length = 643
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL NLGNTCF NSV+Q L + +DYFL G L +A L
Sbjct: 8 GLDNLGNTCFMNSVLQCLANTREFRDYFLGGVFQGEINTENPLGMRGELAVAFAVLLRWL 67
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G + P I KAPQF G+ QHD+ E + LLDGL E+L R N P
Sbjct: 68 --WSGAQRSYAPSRLKSLISVKAPQFTGFAQHDAQEFMAFLLDGL-HEDLN-RIHNKPYV 123
Query: 340 GNGISSNQ-----------------GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+N+ + VD +F GQ STV C EC S ++PFL L
Sbjct: 124 ESVDSANRPDEVVAEESWSRYKLRNDSIVVD-LFQGQYKSTVICPECQKVSINFDPFLYL 182
Query: 383 SLPVPTKK 390
S+P+P K+
Sbjct: 183 SVPLPKKQ 190
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGC- 965
K R ATK + + + PP+L I LKRFS K++ V+F +++ PY P C
Sbjct: 468 KEHRQATKELSLWRLPPVLIIQLKRFSFTRSIFRDKIDKMVDFPINGLDVSPYYCGPACE 527
Query: 966 TDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
+ Y L V+ H G M GGHY A+ G + + VG W D V VS
Sbjct: 528 SGGPQPVYDLFAVINHHGGMLGGHYTAF--GRCTDATDTRLSEVG--WRLFDDSRVNAVS 583
Query: 1026 LEEVLRCEAYILFYEK 1041
V AY+LFY +
Sbjct: 584 DARVATSAAYMLFYRR 599
>gi|383409703|gb|AFH28065.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
gi|384942172|gb|AFI34691.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
Length = 916
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 314 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 371
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 372 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 431 TLPLPLKK 438
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 756 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNPSAR 814
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 815 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 852
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 853 SNVSLASEDQIVTKAAYVLFYQR 875
>gi|410036953|ref|XP_003950154.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Pan
troglodytes]
Length = 907
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 248 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 305
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 306 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 363
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 364 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 422
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 423 TLPLPLKK 430
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 747 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 805
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 806 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 843
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 844 SNVSLASEDQIVTKAAYVLFYQR 866
>gi|405962262|gb|EKC27956.1| Ubiquitin carboxyl-terminal hydrolase 2 [Crassostrea gigas]
Length = 368
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 88/185 (47%), Gaps = 27/185 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------GPLTIALKKLFAETK 280
GL NLGNTCF NSV+Q L L +YFL + TF G L A L
Sbjct: 65 GLRNLGNTCFMNSVLQCLSNTKPLLEYFLRDDFTFDKNTTTSSMKGQLVTAYANLMKSMW 124
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS-- 338
E + ++P SF I AP+F GY Q D+ E LR LL+GL + + P
Sbjct: 125 NERS-DSQVSPNSFKTQIQRFAPRFMGYAQQDAQEFLRYLLEGLHEDVNKVTSKPKPVTI 183
Query: 339 EGNGISSNQGP------VFVDY-------VFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ S++Q V++ Y +F GQ+ S +R +C H S ++PF DLS+P
Sbjct: 184 QDEDFSNDQDKAKEYWRVYLTYDNSHIVEIFVGQLKSELR-FDCDHRSVTFDPFWDLSVP 242
Query: 386 VPTKK 390
+P +
Sbjct: 243 IPKMR 247
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L GV H G + GHY A K G W +D V S +
Sbjct: 304 YNLYGVSNHSGGVHSGHYTANC-----------KHPYSGEWNVFNDTRVSPTSASRAVSS 352
Query: 1033 EAYILFYEKI 1042
EAY+LFYE++
Sbjct: 353 EAYLLFYERV 362
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 137/322 (42%), Gaps = 45/322 (13%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVI-----QWENPHLRWCFPCN 158
+K+ WVCL C CG H +H + PL + + P C C+
Sbjct: 18 NKSPWVCLTCSSVHCG-----RYVNGHAKKHYEDAQVPLANHKKSEKQDKPQHTVCMDCS 72
Query: 159 TL-IPVEKTEENGENKDALSEVVKLIKG-RSTEISSVDVEDAWFGSGNVNSEIKSESTVV 216
+ + ++ N L V K+ + ++ E S+ + NS + ++ V
Sbjct: 73 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHRKRKLLENSSLNTKLLKV 132
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------LNAELTFGPLT 269
+GS A GL NLGNTCF N+++Q+L + Q YF L T G T
Sbjct: 133 NGSTTGICA----TGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT 188
Query: 270 ----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
++L + F +T G + +P S F + P F+GYQQ D+HE +
Sbjct: 189 YHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFM 248
Query: 318 RCLLDGLCSE---------ELAFRKRNSPSEG-NGISSNQGPVFVDYVFGGQIASTVRCV 367
R LLD L E A + NS G N N V +FGG + + V C+
Sbjct: 249 RYLLDHLHLELQGGFNGVSRSAILQENSALSGSNKCCINGASTVVTAIFGGILQNEVNCL 308
Query: 368 ECGHSSTVYEPFLDLSLPVPTK 389
CG S ++PFLDLSL +P++
Sbjct: 309 ICGTESRKFDPFLDLSLDIPSQ 330
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 383 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 441
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V + V++ +AYI
Sbjct: 442 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEDTVVKAKAYI 488
Query: 1037 LFY 1039
LFY
Sbjct: 489 LFY 491
>gi|24234683|ref|NP_004642.2| ubiquitin carboxyl-terminal hydrolase 11 [Homo sapiens]
gi|251757432|sp|P51784.3|UBP11_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 11; AltName:
Full=Deubiquitinating enzyme 11; AltName: Full=Ubiquitin
thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|187954551|gb|AAI40850.1| Ubiquitin specific peptidase 11 [Homo sapiens]
Length = 963
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 310 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 369
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 370 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 429
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 430 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 488
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 489 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 522
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 811 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 865
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 866 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 914
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 915 NQIESKAAYVLFYQR 929
>gi|449276706|gb|EMC85138.1| Ubiquitin carboxyl-terminal hydrolase 19 [Columba livia]
Length = 1425
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF +E+ + G L I L
Sbjct: 585 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLLRAL 644
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 645 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 700
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E + F+ +F GQ S + C C S ++PFL L
Sbjct: 701 ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLP 760
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 761 VPLPQKQ 767
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++++ + P +L I LKRFS + K+N V+F ++L + +
Sbjct: 1189 KQHREASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGRKGE 1248
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY AY R N +++ VG W D V V
Sbjct: 1249 QQLPMYDLYAVINHYGGMIGGHYTAYARL--PNDKNSQRSDVG--WRLFDDSTVTTVDES 1304
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1305 QVVTRYAYVLFYRR 1318
>gi|255548704|ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223545352|gb|EEF46857.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 551
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 29/218 (13%)
Query: 208 EIKSESTVVSGSDLDGNACYVV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----- 260
++K +V D +CY + RGL NLG+TCF NSV+Q LL ++YFL+
Sbjct: 155 DLKKSKQLVLMRDRREKSCYPLGLRGLNNLGSTCFMNSVLQALLHAPPFRNYFLSDRHDR 214
Query: 261 ---AELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
+ + L +A + +G R +P F + Y+Q D+HE
Sbjct: 215 DTCRKRSLDRLCLACNIDVIISALYSGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFF 274
Query: 318 RCLLDGLCSEELAFRKRNSPSEGNGISSNQG----PVFVDYVFGGQIASTVRCVECGHSS 373
LLDG+ SEGNG + N+ VF G++ S V C+ CG +S
Sbjct: 275 IALLDGI-----------HESEGNGRTPNKDNGDCQCIAHRVFSGRLRSDVTCMTCGFTS 323
Query: 374 TVYEPFLDLSLPVPTKKA----PSKKTQPASRAKKTKL 407
T Y+P +D+SL + T + P+K +P A K L
Sbjct: 324 TTYDPCVDISLDMDTSMSSTDVPNKSVRPNENAGKCTL 361
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 45/196 (22%)
Query: 860 DQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVL 919
+++ G C++ EK+ SD +L NCE KRD+ K++
Sbjct: 353 NENAGKCTLSACLDLFTRPEKL-GSDQKLYCQNCEE---------------KRDSFKQMS 396
Query: 920 INKAPPILTIHLKRFSQDARGRLS-KLNGHVNFSEIINLRPYMDPGCT-----------D 967
I + P +L++H+KRF +LS K++ H+ F +++ Y+ D
Sbjct: 397 IKRLPLVLSLHIKRFEHSPVRKLSRKIDWHLQFPFSLDMTSYLSSSILRKRFGNRIFAFD 456
Query: 968 HDNYD----YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVRE 1023
D D + + V+ H G + GHYV Y+R + WY D ++ E
Sbjct: 457 SDEADTSAEFEIFAVITHSGMLESGHYVTYLR-------------LRNQWYKCDDAWITE 503
Query: 1024 VSLEEVLRCEAYILFY 1039
V V + Y++FY
Sbjct: 504 VDETIVRASQCYMIFY 519
>gi|109130539|ref|XP_001093504.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 4
[Macaca mulatta]
Length = 963
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 310 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 369
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 370 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 429
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 430 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 488
Query: 387 P 387
P
Sbjct: 489 P 489
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 811 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 865
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 866 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 914
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 915 NQIESKAAYVLFYQR 929
>gi|402909992|ref|XP_003917678.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Papio anubis]
Length = 963
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 310 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 369
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 370 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 429
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 430 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 488
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 489 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 522
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 811 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 865
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 866 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 914
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 915 NQIESKAAYVLFYQR 929
>gi|440795181|gb|ELR16317.1| ubiquitin carboxylterminal hydrolase 22, putative [Acanthamoeba
castellanii str. Neff]
Length = 535
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 151/380 (39%), Gaps = 70/380 (18%)
Query: 42 PVMKERKPCPHLDKGIDSDKISVKIGS----SDPIRCEDCRE-GVGDRRGKKGKGKHGKK 96
PVM+ C H G + V +G S P RC C G+G R
Sbjct: 47 PVMQYLCICRHHILG--PSPVPVMVGGVQALSVPARCFGCAAPGMGRR------------ 92
Query: 97 KGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFP 156
+ CL C C G H+ H + H L + + L +C
Sbjct: 93 ----------LHACLHCVFVGCADGG-------HLAAHLAEHNHTLAVDVSHGQL-YCGA 134
Query: 157 CNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVE-DAWFGSGN-VNSEIKSEST 214
C + E + + +K + E S V+ + W S + +N +
Sbjct: 135 CKDYVYDRDFELQAAKEQS---TFSAVKQKLAEPSVKQVKYNVWAPSTDDINQLSNNSKR 191
Query: 215 VVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN---------AELTF 265
S+L G +RGL N+GNTCF N ++Q+LL L++YFL+ A
Sbjct: 192 CTVPSNLLG-----LRGLYNMGNTCFMNCILQSLLHNPLLRNYFLSDLHNRSGCSANRDD 246
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
L L LFAE TG P F + A GY Q D+HE L L+GL
Sbjct: 247 ICLACELDYLFAEVYSGTGAPYA--PYHFLYSMWRHADNLAGYDQQDAHEFLISTLNGL- 303
Query: 326 SEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ S G+ +S + V +F G++ S + C+ CG++ST +PF D+SL
Sbjct: 304 ---------HKHSGGSTAASCR--CIVHQIFSGRLRSDLTCLRCGYTSTAIDPFFDISLD 352
Query: 386 VPTKKAPSKKTQPASRAKKT 405
+P ++ ++ + + ++T
Sbjct: 353 LPKARSAPRQAAGSLQQQQT 372
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 30/145 (20%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRL---SKLNGHVNFSEIINLRPYM------- 961
+D+TK++ + P +L HLKRF Q+ SK++ H+ + ++++ PY
Sbjct: 379 QDSTKQLSMQSLPLVLCFHLKRFKQEGLASTASSSKIDTHIRYPFVLDMSPYASSTIVSQ 438
Query: 962 ----DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHAS 1017
+P D Y+ L VV+H G + GH+V +VR + W+
Sbjct: 439 RLGREPPSAPPDLYE--LFAVVDHKGKIDNGHFVCFVRHESR-------------WFKCD 483
Query: 1018 DVYVREVSLEEVLRCE-AYILFYEK 1041
D + ++ R + +Y+LFY +
Sbjct: 484 DATITPTQPHQIARSKGSYLLFYMR 508
>gi|332243835|ref|XP_003271077.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Nomascus
leucogenys]
Length = 963
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 310 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 369
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 370 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 429
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 430 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 488
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 489 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 522
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 811 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 865
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 866 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 914
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 915 NQIESKAAYVLFYQR 929
>gi|297709837|ref|XP_002831614.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pongo abelii]
Length = 934
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 310 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 369
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 370 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 429
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 430 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 488
Query: 387 P 387
P
Sbjct: 489 P 489
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 30/139 (21%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P D +
Sbjct: 781 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQND---S 835
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAY--VRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
+ + Y Y L+ V H G MR GHY + +G G W++ D V V
Sbjct: 836 NPELYKYDLIAVSNHYGGMRDGHYTTFACFKG-------------SGQWHYFDDNSVTAV 882
Query: 1025 SLE--EVLRCEAYILFYEK 1041
+ EVL+ AY+LFY++
Sbjct: 883 NENQIEVLKA-AYVLFYQR 900
>gi|348581896|ref|XP_003476713.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Cavia porcellus]
Length = 1296
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 516 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 575
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 576 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 631
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+E + F+ +F GQ S + C C S ++PFL L
Sbjct: 632 ETVDSDGRPDEVVAAEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLP 691
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 692 VPLPQKQ 698
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K+ R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1100 KLHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1158
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1159 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1214
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1215 QVVTRYAYVLFYRR 1228
>gi|345328594|ref|XP_001505377.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Ornithorhynchus
anatinus]
Length = 974
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 95/186 (51%), Gaps = 29/186 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPE- 282
GL NLGNTCF NS +Q L ++ L +YFLN AE+ PL + + + FA+ +
Sbjct: 310 GLGNLGNTCFMNSALQCLSNIAPLTEYFLNDKYEAEINRDNPLGMKGEIAEAFAQLIKQM 369
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 370 WSGRNAQVVPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYLEL 427
Query: 338 SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ NG + + + V VD F G ST+ C +C S ++PF L+L
Sbjct: 428 QDANGRPDLVVAKEAWDNHRLRNDSVIVD-TFHGLFKSTLVCPQCSKISVTFDPFCYLTL 486
Query: 385 PVPTKK 390
P+P KK
Sbjct: 487 PLPLKK 492
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 64/140 (45%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK+ + P IL +HLKRFS + R KL+ V+F SE I
Sbjct: 815 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTQVDFPIRNLCMSEFI-----C 868
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
DP Y Y L+ V H G M GHY AY K + G WY+ D V
Sbjct: 869 DPAAGP---YIYDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDDSNV 914
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 915 SLASEDQIVTKAAYVLFYQR 934
>gi|410988427|ref|XP_004000487.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Felis catus]
Length = 951
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL DYFL EL F PL + + + +A+ +
Sbjct: 298 GLTNLGNTCFMNSALQCLSNVPQLTDYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQA 357
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 358 WSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 417
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 418 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 476
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 477 PVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 510
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 799 ATKKLDLWMLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNE---S 853
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 854 APELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVTE 902
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 903 NQIESKAAYVLFYQR 917
>gi|326928027|ref|XP_003210186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Meleagris
gallopavo]
Length = 1426
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF +E+ + G L I L
Sbjct: 586 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLLRAL 645
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 646 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 701
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E + F+ +F GQ S + C C S ++PFL L
Sbjct: 702 ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLP 761
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 762 VPLPQKQ 768
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++++ + P +L I LKRFS + K+N V+F ++L + +
Sbjct: 1190 KQHREASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGRKGE 1249
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY AY R P +K +++ VG W D V V
Sbjct: 1250 QQLPMYDLYAVINHYGGMIGGHYTAYAR-LPSDK-NSQRSDVG--WRLFDDSTVTTVDES 1305
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1306 QVVTRYAYVLFYRR 1319
>gi|330822504|ref|XP_003291691.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
gi|325078127|gb|EGC31796.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
Length = 536
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 914 ATKRVLINKAPPILTIHLKRFS-QDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD 972
A K + I +PPILT+ +KRFS D+ G K N H+ F + ++L PYM DH YD
Sbjct: 305 AEKSLQIEISPPILTVQIKRFSFLDSYG--GKDNKHIQFGQTLDLSPYMTQT-NDHSIYD 361
Query: 973 YRLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR 1031
L V+ HLG + GHY YV+G GVWY D V +VSL+ VLR
Sbjct: 362 --LYAVLVHLGDSTNSGHYYCYVKG------------TNGVWYKMDDSMVSQVSLKSVLR 407
Query: 1032 CEAYILFYEK 1041
+AY+LFY K
Sbjct: 408 SKAYMLFYSK 417
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE----LTFGPLTI--ALKKLFAETKPETG 284
GL N+GNTCF NS++Q L S L +Y ++ E T I +L+ + ETG
Sbjct: 115 GLYNIGNTCFMNSIIQCLTYSSTLANYMISREHSKNCTNKSFCIFCSLEDHIIISHRETG 174
Query: 285 LRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGIS 344
I P I AP F+ +Q DSHE ++D L L+ + + S + ++
Sbjct: 175 --KSITPIVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCLSKFPKGTISPRDSMT 232
Query: 345 SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQ 397
+ G +FGG + S ++C C + S ++ F+DLS+ + + +K Q
Sbjct: 233 TIIGS-----IFGGYLRSQLKCSVCQYESNKFDEFMDLSIDINQADSLTKGLQ 280
>gi|405970379|gb|EKC35288.1| Ubiquitin carboxyl-terminal hydrolase 19 [Crassostrea gigas]
Length = 1310
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPL----------TIALK 273
+ GL NLGNTCF NSV+Q L ++ +DYFL + T PL + L+
Sbjct: 392 MTGLDNLGNTCFMNSVLQALSNTTEFRDYFLESRFQNDINTDNPLGMGGKLAVSYAVLLR 451
Query: 274 KLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK 333
L++ G P + KA QF G+ QHD+ E + LDGL + +K
Sbjct: 452 TLWS------GKHYSYAPSKLKSLVGQKASQFNGFAQHDAQEFMAFFLDGLHEDLNRIKK 505
Query: 334 RNS--------------PSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
+ E + + F+ +F GQ S + C CG S ++PF
Sbjct: 506 KPYTETVDSDGRSDEVVADEAWEMYKKRNDSFIVDLFQGQYKSKLTCPVCGKISITFDPF 565
Query: 380 LDLSLPVPTKK 390
L LSLP+P KK
Sbjct: 566 LYLSLPLPKKK 576
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+ATK++ I + P L I LKRFS K++ V F ++L PY G D
Sbjct: 1057 KEHREATKQMSIWRLPHTLIIQLKRFSFRNFIWRDKIDKMVEFPVRGLDLSPYTKIGA-D 1115
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L VV H G + GGHY ++VR P + K E W D V +S E
Sbjct: 1116 KSPPVYDLYAVVNHYGGILGGHYTSFVR-TPDARDPTKNEL---DWRLCDDSRVNNISGE 1171
Query: 1028 E-VLRCEAYILFYEK 1041
V+ AY+LFY K
Sbjct: 1172 RNVVSRGAYLLFYRK 1186
>gi|334333719|ref|XP_001367829.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Monodelphis domestica]
Length = 1468
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF AE+ + G L I L
Sbjct: 674 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFEAEINYSNPLGTGGRLAIGFAVLLRAL 733
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 734 --WKGTHHAFQPSKLKAIVASKANQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 789
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 790 -ETVDSDGRPDEVVAQEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKLSITFDPFLYL 848
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 849 PVPLPQKQ 856
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++++ + P + I LKRFS + K+N V F ++L + D
Sbjct: 1266 KQHREASKQLMLWRLPNVFIIQLKRFSFRSFIWRDKINDMVEFPVRNLDLSKFCIGQKDD 1325
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY AY R P +K +++ VG W D V V
Sbjct: 1326 RQLPTYDLYAVINHYGGMIGGHYTAYAR-LPSDK-NSQRSDVG--WRLFDDSTVTIVDES 1381
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1382 QVVTRYAYVLFYRR 1395
>gi|410895865|ref|XP_003961420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Takifugu
rubripes]
Length = 506
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 146/358 (40%), Gaps = 48/358 (13%)
Query: 50 CPHLDK-GIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIW 108
CPH++ +D+ K ++++ + G + R +K K G+ L +
Sbjct: 6 CPHVNSFKVDNWKQNLRVIYQCFVW-----SGSAETRKRKAKSCICHMCGAHL---NRLH 57
Query: 109 VCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEE 168
CL C +AC + H+ HA+ RH L I + +CF C I + E+
Sbjct: 58 SCLHCVFFACFA-------KKHIHEHAKSKRHNLAIDLLYGGI-YCFMCQDYIYDKDMEQ 109
Query: 169 NGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYV 228
+++ + ++ I + + E I S T+
Sbjct: 110 IAKDEQRKAWKMQGIGEKYSTWEPTKRELELLRHNPKRRRITSNCTIG------------ 157
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPET 283
+RGL NLGNTCF N ++Q L L+D+FL+ L + +LF E +
Sbjct: 158 LRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCQMQSDSCLVCEMSQLFQEF--YS 215
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C ++ +K N+P+
Sbjct: 216 GHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNG-KKANNPNHC 274
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQP 398
N I +D +F G + S V C C ST +PF D+SL +P P P
Sbjct: 275 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSP 324
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 32/146 (21%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 371 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 429
Query: 962 ------DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYH 1015
DP ++DN Y L VV H GT+ GHY ++R W+
Sbjct: 430 QCQQIVDP--FNNDN-KYSLFAVVNHQGTLESGHYTTFIRQHKDQ------------WFK 474
Query: 1016 ASDVYVREVSLEEVLRCEAYILFYEK 1041
D + + S+++VL E Y+LFY K
Sbjct: 475 CDDAIITKASIKDVLDSEGYLLFYHK 500
>gi|268531894|ref|XP_002631075.1| Hypothetical protein CBG02847 [Caenorhabditis briggsae]
Length = 1130
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 201 GSGNVNSEIKSESTVVSGSDLDGNACYV---VRGLANLGNTCFFNSVMQNLLAMSQLQDY 257
S V S K + V D + C V GL N+GNTCF N+++Q L+ +L+++
Sbjct: 383 ASAAVMSSYKPTAKVSPYEDDRDSVCIVDQGYTGLRNIGNTCFMNAILQMLVNNVELREF 442
Query: 258 FLNAELTF-----GPLTIA--LKKLFAETKPET--GLRNVINPRSFFGCICSKAPQFKGY 308
FL PL L + FA+ + G I P + KA QF +
Sbjct: 443 FLRDHYKMEINESNPLGSEGRLARAFADFMVQMWNGRHKAIEPVHIKNIVSEKASQFANF 502
Query: 309 QQHDSHELLRCLLDGLCSEELAFRKRNSPSEG------------------NGISSNQGPV 350
QHD+HE L LLDGL E R + P G N I N +
Sbjct: 503 AQHDAHEFLSFLLDGL--HEDVNRVKKKPLTGTVESHGRHDLDVSNEAWRNHILRNDS-I 559
Query: 351 FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
FVD +F GQ+ S V+C C S ++PF+ L +P P K
Sbjct: 560 FVD-LFHGQLKSHVQCPNCDRVSITFDPFVYLPVPFPKNK 598
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 886 SQLVAGNCESEESKVEE-INSKIVKVKRDATKRVLINKAPPILTIHLKRF------SQDA 938
+Q+++ E+E K EE K +ATKR+ + + PP+L I LKRF Q +
Sbjct: 943 TQMLSLFSETERLKPEESWYCSTCKEHVEATKRLQLYRLPPVLIIQLKRFVYTAFTHQTS 1002
Query: 939 RGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGG 997
R SK + V + E +++ P++ H++ Y L GVV H G+ GHY++ R
Sbjct: 1003 VHRRSKDDRTVEYPLESLDMSPFLSETSPSHNSTMYDLTGVVCHSGSSYFGHYISLGRLA 1062
Query: 998 PKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYE 1040
+ K K E W D V V V EAY+LFY+
Sbjct: 1063 DFDSSKTKIE-----WRKFDDSMVDRVPSGHVQTNEAYLLFYK 1100
>gi|432857080|ref|XP_004068528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Oryzias
latipes]
Length = 998
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 25/184 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPET 283
GL+NLGNTCF NS +Q L L +YFL+ AE+ PL + + + +A+ +
Sbjct: 322 GLSNLGNTCFMNSALQCLSNAPPLTEYFLDDQYEAEINRENPLGMRGEIAEAYADLVKQM 381
Query: 284 GLR--NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK------RN 335
L + + PR+F + APQF GYQQ DS ELL LLDGL + +K R+
Sbjct: 382 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRD 441
Query: 336 SPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ + I + + V VD +F G ST+ C C S ++PF L+LP+
Sbjct: 442 AEGREDEIVAKEAWKNHRLRNDSVIVD-IFHGLFKSTLVCPVCSKVSVTFDPFCYLTLPL 500
Query: 387 PTKK 390
P KK
Sbjct: 501 PMKK 504
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V+F +N+ ++ DP +
Sbjct: 850 KKHQQATKKFDLWSLPRILVVHLKRFSYNRCWR-DKLDTVVDFPIRDLNMSEFVCDPKAS 908
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GGHY AY KNK+ K WY+ D V +
Sbjct: 909 P---YIYDLIAVSNHYGGMGGGHYTAYA----KNKLDGK-------WYYFDDSSVSSATD 954
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 955 DQIVTKAAYVLFYQR 969
>gi|348581892|ref|XP_003476711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Cavia porcellus]
Length = 1321
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 541 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 600
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 601 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 656
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+E + F+ +F GQ S + C C S ++PFL L
Sbjct: 657 ETVDSDGRPDEVVAAEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLP 716
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 717 VPLPQKQ 723
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K+ R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1125 KLHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1183
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1184 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1239
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1240 QVVTRYAYVLFYRR 1253
>gi|355704756|gb|EHH30681.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca mulatta]
Length = 929
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 276 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 335
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 336 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 395
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 396 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 454
Query: 387 P 387
P
Sbjct: 455 P 455
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 777 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 831
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 832 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 880
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 881 NQIESKAAYVLFYQR 895
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 54 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 109
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 110 LRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 169
Query: 307 GYQQHDSHELLRCLLDGLCSE----------ELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L E ++ ++ S N N V +F
Sbjct: 170 GYQQQDAHEFMRYLLDHLHLELQGGFNGVPRSSILQENSTLSANNKCCINGASTVVTAIF 229
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 230 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 262
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P ++ Y L
Sbjct: 315 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAA 373
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 374 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTVTDEETVGKAKAYI 420
Query: 1037 LFY 1039
LFY
Sbjct: 421 LFY 423
>gi|348581894|ref|XP_003476712.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Cavia porcellus]
Length = 1357
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 540 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 599
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 600 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 655
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+E + F+ +F GQ S + C C S ++PFL L
Sbjct: 656 ETVDSDGRPDEVVAAEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLP 715
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 716 VPLPQKQ 722
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K+ R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1124 KLHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1182
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1183 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1238
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1239 QVVTRYAYVLFYRR 1252
>gi|344252839|gb|EGW08943.1| Ubiquitin carboxyl-terminal hydrolase 4 [Cricetulus griseus]
Length = 940
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 280 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 337
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 338 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 396
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + +G + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 397 PKDASGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 455
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 456 LPLPLKK 462
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 779 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRGLNMSEFVCDRSAR 837
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 838 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 875
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 876 SNVSLASEDQIVTKAAYVLFYQR 898
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 29/188 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN---AEL---------TF-----GPLTIALK 273
GL NLGNTCF N+++Q+L + Q YF EL T+ G + ++L
Sbjct: 162 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNVSLV 221
Query: 274 KLFAETKPET--GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL------- 324
+ F +T G + +P S F + P F+GYQQ D+HE +R LLD L
Sbjct: 222 EEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGE 281
Query: 325 ---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
S + + S S N N V VFGG + + V C+ CG S ++PFLD
Sbjct: 282 FDGSSHSVLSQANCSRSVSNKCCINGASTVVTSVFGGVLQNEVNCLICGTESRKFDPFLD 341
Query: 382 LSLPVPTK 389
LSL +P++
Sbjct: 342 LSLDIPSQ 349
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V+F ++++ + ++P ++ Y L
Sbjct: 402 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLEA 460
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 461 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTEEETVAKAKAYI 507
Query: 1037 LFY 1039
LFY
Sbjct: 508 LFY 510
>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 756
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL---------TFGPLTIALKKLFAETKP 281
GL NLGNTCF NS++Q L + L +Y L G L + L E
Sbjct: 163 GLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRFLKDINKSSSMNGLLFHSYADLMKEIWD 222
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+ +P F I AP+F GY Q DS E LR +L+GL E +KR +P
Sbjct: 223 PDMANSSTSPSRFKSQIQRFAPRFMGYSQQDSQEFLRYVLEGLHMEVNRVQKRPNPIKPD 282
Query: 338 SEGNGISSNQGPVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
E + + Y+ F GQ+ ST+ C EC ST ++PF DLSLP+P
Sbjct: 283 YEAEDYNEKANLYWRRYLSMDNSEIVDLFVGQLMSTLECGECSFKSTTFDPFWDLSLPIP 342
Query: 388 TK 389
K
Sbjct: 343 KK 344
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K +R K I K P IL +HLKRFS + R R SK++ V++ ++L + CT
Sbjct: 374 KTRRRCAKSFSIQKFPQILVLHLKRFSGE-RFR-SKMSVMVDYPLRNLDLIGFATSSCT- 430
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y+L V H G++ GHY A + G W+ +D +V +S
Sbjct: 431 QKSAQYKLYAVSNHSGSVYTGHYTA-----------SCLNPYTGDWHSFNDSHVHAISEN 479
Query: 1028 EVLRCEAYI 1036
V+ E Y+
Sbjct: 480 SVVSAEGYV 488
>gi|57524946|ref|NP_001006134.1| ubiquitin carboxyl-terminal hydrolase 4 [Gallus gallus]
gi|53131277|emb|CAG31805.1| hypothetical protein RCJMB04_11i7 [Gallus gallus]
Length = 964
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 29/186 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L DYFL AE+ PL + + + +AE +
Sbjct: 328 GLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIAEAYAELIKQI 387
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G ++ + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 388 WSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYLEL 445
Query: 338 SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ NG + + + + VD +F G ST+ C +C S ++PF L+L
Sbjct: 446 KDANGRPDSVVAKEAWENHRLRNDSIIVD-IFHGLFKSTLVCPKCSKVSVTFDPFCYLTL 504
Query: 385 PVPTKK 390
P+P K+
Sbjct: 505 PLPLKR 510
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS R KL+ V F +N+ ++ DP
Sbjct: 823 KKHQQATKKFDLWSLPKILVVHLKRFSYSRYWR-DKLDTVVEFPIRGLNMSEFVCDP--- 878
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+Y Y L+ V H G M GHY AY KNKV G WY+ D V S
Sbjct: 879 RGGSYVYDLIAVSNHYGAMGVGHYTAYA----KNKV-------NGEWYYFDDSSVSLASE 927
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 928 DQIVTKAAYVLFYQR 942
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 29/188 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN---AEL---------TF-----GPLTIALK 273
GL NLGNTCF N+++Q+L + Q YF EL T+ G + ++L
Sbjct: 162 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNVSLV 221
Query: 274 KLFAETKPET--GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL------- 324
+ F +T G + +P S F + P F+GYQQ D+HE +R LLD L
Sbjct: 222 EEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGE 281
Query: 325 ---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
S + + S S N N V VFGG + + V C+ CG S ++PFLD
Sbjct: 282 FDGSSHSVLSQANCSRSACNKCCINGASTVVTSVFGGVLQNEVNCLICGTESRKFDPFLD 341
Query: 382 LSLPVPTK 389
LSL +P++
Sbjct: 342 LSLDIPSQ 349
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V+F ++++ + ++P ++ Y L
Sbjct: 402 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLAA 460
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY + G W+H +D V E V + +AYI
Sbjct: 461 VVVHHGSGVGSGHYTAYA-------------THKGRWFHFNDSTVTLTEEETVAKAKAYI 507
Query: 1037 LFY 1039
LFY
Sbjct: 508 LFY 510
>gi|449475954|ref|XP_002188777.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Taeniopygia guttata]
Length = 476
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 124/305 (40%), Gaps = 34/305 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E+
Sbjct: 12 CLYCVFFGC-------FTKKHIHEHAKTKRHNLAIDLLYGGI-YCFMCQDYIYDKDMEQI 63
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSE-IKSESTVVSGS----DLDGN 224
K+ + KL T +S G E K E ++ + + N
Sbjct: 64 A--KEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTN 121
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAE 278
+RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E
Sbjct: 122 CTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQE 181
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRN 335
+G R+ P + + A GY+Q D+HE L LD L C + +K N
Sbjct: 182 FY--SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 239
Query: 336 SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
+P+ N I +D +F G + S V C C ST +PF D+SL +P P
Sbjct: 240 NPNHCNCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWP 291
Query: 396 TQPAS 400
P S
Sbjct: 292 LSPGS 296
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 341 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 399
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 400 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 447
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 448 AIITKASIKDVLDSEGYLLFYHK 470
>gi|351711877|gb|EHB14796.1| Ubiquitin carboxyl-terminal hydrolase 19 [Heterocephalus glaber]
Length = 1394
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 546 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 605
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 606 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 661
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+E + F+ +F GQ S + C C S ++PFL L
Sbjct: 662 ETVDSDGRPDEVVAAEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLP 721
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 722 VPLPQKQ 728
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1130 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1188
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1189 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1244
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1245 QVVTRYAYVLFYRR 1258
>gi|297690455|ref|XP_002822651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pongo abelii]
Length = 566
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALMEEFAKLIQTIWT 327
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 SSPSDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENF 387
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 447
Query: 389 KKAP 392
+ P
Sbjct: 448 RGYP 451
>gi|148745324|gb|AAI42474.1| USP11 protein [Bos taurus]
Length = 910
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 108/234 (46%), Gaps = 32/234 (13%)
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF- 265
+ ST+ D G + GL NLGNTCF NS +Q L + QL +YFL EL F
Sbjct: 239 TRSTLEEEEDFQGQPG--ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFC 296
Query: 266 GPLTIA--LKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
PL + + + +A+ + +G I P+ F + A QF GYQQHDS ELL LL
Sbjct: 297 NPLGMKGEIAQAYADLVKQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLL 356
Query: 322 DGLCSEELAFRKRN---------SPSEGNGISSNQG------PVFVDYVFGGQIASTVRC 366
DGL + +K+ P + + Q V VD F G ST+ C
Sbjct: 357 DGLHEDLNRIKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVC 415
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
+CG+ S ++PF LS+P+P + P + ++ +L K G+I
Sbjct: 416 PDCGNVSVTFDPFCYLSVPLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 469
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P D +
Sbjct: 758 ATKKLDLWMLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQND---S 812
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 813 SRELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDSSVSPVTE 861
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 862 NQIESKAAYVLFYQR 876
>gi|427778559|gb|JAA54731.1| Putative ubiquitin specific peptidase 2 [Rhipicephalus pulchellus]
Length = 494
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF------GPLTIALKKLFAETK 280
GL NLGNTCF NS++Q L L +Y L +E+ G L A L
Sbjct: 61 GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDGYVSEINTSTSSMKGALFEAFATLMKSIW 120
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPS 338
+ I+P++F I AP+F GY Q DS E L LL GL + + R R+ +
Sbjct: 121 RSSNGEYAISPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINRITTRPRHLTT 180
Query: 339 E-GNGISSNQGPV-----FVDY-------VFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
E + +S +Q ++ Y F GQ+ ST++C CGH S ++PF DLSLP
Sbjct: 181 EIDDNLSESQKAAEAWKRYLRYDDSKIVDCFVGQLKSTLKCSVCGHKSVTFDPFWDLSLP 240
Query: 386 VPTKKAPSKKTQPASRAKKTKL------PPKKSGRIRAKGTK 421
+P P Q S K ++ P + R K TK
Sbjct: 241 IPKGSDPVTLQQCLSLFTKEEVLDGDEKPTCSHCKTRQKCTK 282
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTD 967
K ++ TK I++ P IL +HLKRFS R R +KLN V F ++L PYM ++
Sbjct: 370 KTRQKCTKSFTIHRCPKILVLHLKRFSPSERFR-AKLNTRVEFPLTNLDLCPYM----SN 424
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V H G+ GHY A PK+ G W+ +D V EVS
Sbjct: 425 SHYVMYNLYAVSNHSGSTYSGHYTATCLH-PKS----------GEWHECNDTKVSEVSAS 473
Query: 1028 EVLRCEAYILFYE 1040
V+ EAY+LFYE
Sbjct: 474 RVVSSEAYVLFYE 486
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 356 FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKL------PP 409
F GQ+ ST++C CGH S ++PF DLSLP+P P Q S K ++ P
Sbjct: 306 FVGQLKSTLKCSVCGHKSVTFDPFWDLSLPIPKGSDPVTLQQCLSLFTKEEVLDGDEKPT 365
Query: 410 KKSGRIRAKGTK 421
+ R K TK
Sbjct: 366 CSHCKTRQKCTK 377
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLFASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------AAHE---GRWFHFNDSTVTVTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 136/328 (41%), Gaps = 57/328 (17%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHAR-----QTRHPLVIQWENPHLRWCFPCN 158
+K+ WVCL C CG H +H T H + E C C+
Sbjct: 35 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDCS 89
Query: 159 TL-IPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNV-------NSEIK 210
+ + ++ N L V K+ + ++E++ F S NS +
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQ------NLENSAFTSDRHRKRKLLENSSLN 143
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF-------LNAEL 263
S+ V+GS GL NLGNTCF N+++Q+L + Q YF L
Sbjct: 144 SKLLKVNGS----TTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGK 199
Query: 264 TFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQH 311
T G T ++L + F +T G + +P S F + P F+GYQQ
Sbjct: 200 TAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQ 259
Query: 312 DSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIA 361
D+HE +R LLD L S + ++ +S + + N V +FGG +
Sbjct: 260 DAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLTASSKCCINGASTVVTAIFGGILQ 319
Query: 362 STVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ V C+ CG S ++PFLDLSL +P++
Sbjct: 320 NEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------AAHE---GRWFHFNDSTVTLTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>gi|355757316|gb|EHH60841.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca fascicularis]
Length = 933
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 280 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 339
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 340 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 399
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 400 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 458
Query: 387 P 387
P
Sbjct: 459 P 459
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 781 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 835
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 836 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 884
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 885 NQIESKAAYVLFYQR 899
>gi|327266242|ref|XP_003217915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Anolis
carolinensis]
Length = 1414
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF +E+ + G L I L
Sbjct: 571 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAVLLRAL 630
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 631 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 686
Query: 338 --------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E + F+ +F GQ S + C C S ++PFL L
Sbjct: 687 ETVDSDGRPDEVVAEEAWHRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLP 746
Query: 384 LPVPTKK 390
+P+P K+
Sbjct: 747 VPLPQKQ 753
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++++ + P +L I LKRFS + K+N V+F ++L + +
Sbjct: 1181 KQHREASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGQKDE 1240
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY AY R P +K +++ VG W D V V
Sbjct: 1241 QQLPMYDLYAVINHYGGMIGGHYTAYAR-LPSDK-NSQRSDVG--WRLFDDSTVTTVDES 1296
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1297 QVVTRYAYVLFYRR 1310
>gi|145340853|ref|XP_001415532.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575755|gb|ABO93824.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 688
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----------GPLTIALKKLFAET 279
GL+NLGNTCF NS +Q L S L DYFL+ + G L L
Sbjct: 34 GLSNLGNTCFMNSALQCLSHSSLLTDYFLSDKYEVDINTDNPIGMGGELAKEYANLIGAL 93
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+ L + PR F + APQF GY Q D+ ELL LLDGL E+L R +N P
Sbjct: 94 WRDGAL--TVTPRKFKSSLARFAPQFSGYMQQDAQELLAFLLDGL-HEDLN-RVKNKPYA 149
Query: 338 ----SEGN-----------GISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+EG ++ VD F GQ S + C C + S ++PF+ L
Sbjct: 150 TERDAEGRSDEDVANESWEAHTARNNSCIVD-TFQGQYRSKLVCPSCSNKSVKFDPFMYL 208
Query: 383 SLPVPTKK 390
S+PVP+ +
Sbjct: 209 SIPVPSAR 216
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYD 972
A K++ + + PPIL +HLKRFS +R K++ ++F +++ PY+ P +
Sbjct: 527 AMKKLDLWRMPPILVMHLKRFSY-SRTWRDKIDTLIDFPLNTLDMTPYVLPNASSGPAPI 585
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL-R 1031
Y L VV H G M GGHY AY R + G W+ D V + L
Sbjct: 586 YDLYAVVNHFGGMGGGHYTAYTRHAEE-----------GTWHLYDDSRCTAVDVGAALNN 634
Query: 1032 CEAYILFYEK 1041
AY+LFY++
Sbjct: 635 SAAYVLFYKR 644
>gi|62897009|dbj|BAD96445.1| ubiquitin specific protease, proto-oncogene isoform b variant [Homo
sapiens]
Length = 916
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 313
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 314 QMWSGRDAHAAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 371
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG +++ + V VD F G ST+ C EC S ++PF L
Sbjct: 372 ELKDANGRPDAVAAEEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 431 TLPLPLKK 438
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 756 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 814
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 815 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 852
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 853 SNVSLASEDQIVTKAAYVLFYQR 875
>gi|297827733|ref|XP_002881749.1| ubiquitin-specific protease 5 [Arabidopsis lyrata subsp. lyrata]
gi|297327588|gb|EFH58008.1| ubiquitin-specific protease 5 [Arabidopsis lyrata subsp. lyrata]
Length = 924
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 99/218 (45%), Gaps = 40/218 (18%)
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF- 258
F +G+V +ST S + + GL NLGNTCF NS +Q L+ + YF
Sbjct: 287 FRTGSVEVSQSFDSTYSSTGVTTRGSTAGLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQ 346
Query: 259 --LNAELTF-------GPLTIA----LKKLFAETKPETGLRNVINPRSFFGCICSKAPQF 305
+ E+ + G L +A L+KL+A R I PR F + APQF
Sbjct: 347 EDYHQEINWQNPLGMVGELALAFGDLLRKLWAPG------RTPIAPRPFKAKLARFAPQF 400
Query: 306 KGYQQHDSHELLRCLLDGLCSEELAFRKRN----------SPSE-------GNGISSNQG 348
GY QHDS ELL LLDGL E+L K P E N I+ N
Sbjct: 401 SGYNQHDSQELLAFLLDGL-HEDLNRVKHKPYINSRDADGRPDEEVADEFWANHIARNDS 459
Query: 349 PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+ VD V GQ ST+ C C S ++PF+ LSLP+
Sbjct: 460 -IIVD-VCQGQYKSTLVCPICNKVSVTFDPFMYLSLPL 495
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHD 969
+R A+K++ + + P +L IHLKRFS +R KL VNF ++L Y+
Sbjct: 797 RRQASKKLDLWRLPEVLVIHLKRFSY-SRSMKHKLETFVNFPVHDLDLTKYVANKNLSQP 855
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
Y L + H G M GHY A+++ N+ WY+ D ++ ++ ++V
Sbjct: 856 QL-YELYALTNHYGGMGSGHYTAHIKLLDDNR-----------WYNFDDSHISHINEDDV 903
Query: 1030 LRCEAYILFYEK 1041
AY+LFY +
Sbjct: 904 KSGAAYVLFYRR 915
>gi|426340532|ref|XP_004034183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Gorilla gorilla gorilla]
Length = 633
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
>gi|449016365|dbj|BAM79767.1| ubiquitin-specific protease UBP15 [Cyanidioschyzon merolae strain
10D]
Length = 814
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL+NLGNTCF NS +Q L + L ++FL+ E T G L L +
Sbjct: 230 GLSNLGNTCFMNSAIQCLASTVPLAEFFLSGEYRKDLNRSNPLGTGGVLAEEFAALVRQL 289
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---- 335
+ + + PR F + APQF GY QHD+ E + LLDGL + R++
Sbjct: 290 WSTS--QGTVAPRRFKYQVSRYAPQFSGYGQHDAQEWITFLLDGLHEDLNRVRRKPYIPL 347
Query: 336 ------SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
P E + + +F GQ S V+C EC S ++PF+ LSLP+P +
Sbjct: 348 DPDQDVPPDEAWRYHKARNDSVIVDLFHGQYRSRVQCPECDKISVTHDPFMYLSLPLPGR 407
Query: 390 K 390
+
Sbjct: 408 R 408
Score = 46.2 bits (108), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 24/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K + A K++ + +AP IL IHLKRF + R KL+ V F + NL +D
Sbjct: 675 KKHQRAWKQLSLYRAPSILIIHLKRFQYTSWFR-DKLDVLVEFP-LRNLE--LDFAG--- 727
Query: 969 DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR------ 1022
+ Y L V H+G + GHY A ++ W++ D YV
Sbjct: 728 NRVVYDLYAVSHHMGGLGSGHYTASCYRASCSR-----------WFYFDDAYVSALPEDP 776
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
E + ++ AYILFY++
Sbjct: 777 EEVAKRIVSPSAYILFYQR 795
>gi|238477375|sp|Q6DCJ1.2|UB22B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-B; AltName:
Full=Deubiquitinating enzyme 22-B; AltName:
Full=Ubiquitin thioesterase 22-B; AltName:
Full=Ubiquitin-specific-processing protease 22-B
Length = 523
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 136/336 (40%), Gaps = 35/336 (10%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G+ L + CL C ++ C + H+ HA+ R
Sbjct: 32 GTPETRKRKAKSCVCHMCGAHL---NRLHSCLYCVYFGC-------FTKKHIHEHAKNKR 81
Query: 140 HPLVIQWENPHLRWCFPCNTLIP---VEKTEENGENKDALSEVVKLIKGRSTEISSVDVE 196
H L I + +CF C I +E+ + + K +V + + V
Sbjct: 82 HNLAIDLLYGGI-YCFMCQDYIYDKDMEQVAKEEQRKAWKLQVFSPALVSPYQYTMTGVG 140
Query: 197 DAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQD 256
+ + E++ + N +RGL NLGNTCF N ++Q L L+D
Sbjct: 141 EKYSTWEPTKRELELLQHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRD 200
Query: 257 YFLN----AELTFGP---LTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
+FL+ E+ P L + LF E +G R+ P + + A GY+
Sbjct: 201 FFLSDRHKCEMQ-SPNSCLVCEMSTLFQEF--YSGHRSPHIPYRLLHLVWTHARHLAGYE 257
Query: 310 QHDSHELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRC 366
Q D+HE L LD L C + +K N+P+ N I +D +F G + S V C
Sbjct: 258 QQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCI--------IDQIFTGGLQSDVTC 309
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRA 402
C ST +PF D+SL +P P P S A
Sbjct: 310 QVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDA 345
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 388 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMMPFMASSKESRMNG 446
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + H++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 447 QYQQPSDSLHNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 494
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++V+ E Y+LFY K
Sbjct: 495 AIITKASIKDVIDSEGYLLFYHK 517
>gi|327283669|ref|XP_003226563.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Anolis carolinensis]
Length = 525
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 134/335 (40%), Gaps = 37/335 (11%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G+ L + CL C + C + H+ HA+ R
Sbjct: 34 GSAEARKRKAKSCICHMCGAHL---NRLHSCLYCVFFGC-------FTKKHIHEHAKAKR 83
Query: 140 HPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAW 199
H L I + +CF C I + E+ K+ + KL T +S
Sbjct: 84 HNLAIDLLYGGI-YCFMCQDYIYDKDMEQIA--KEEQRKAWKLQAFTPTMVSHYQCTMTG 140
Query: 200 FGSGNVNSE-IKSESTVVSGS----DLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQL 254
G E K E ++ + + N +RGL NLGNTCF N ++Q L L
Sbjct: 141 IGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLL 200
Query: 255 QDYFLN------AELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGY 308
+D+FL+ + L + LF E +G R+ P + + A GY
Sbjct: 201 RDFFLSDRHKCEMQSPSSCLVCEMSTLFQEF--YSGHRSPHIPYRLLHLVWTHARHLAGY 258
Query: 309 QQHDSHELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVR 365
+Q D+HE L LD L C + +K N+P+ N I +D +F G + S V
Sbjct: 259 EQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCI--------IDQIFTGGLQSDVT 310
Query: 366 CVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
C C ST +PF D+SL +P P P S
Sbjct: 311 CQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPADSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 497 AIITKASIKDVLDSEGYLLFYHK 519
>gi|147904969|ref|NP_001090240.1| ubiquitin carboxyl-terminal hydrolase 22-B [Xenopus laevis]
gi|50418363|gb|AAH78033.1| Usp27x protein [Xenopus laevis]
Length = 572
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 126/306 (41%), Gaps = 32/306 (10%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIP---VEKT 166
CL C ++ C + H+ HA+ RH L I + +CF C I +E+
Sbjct: 108 CLYCVYFGC-------FTKKHIHEHAKNKRHNLAIDLLYGGI-YCFMCQDYIYDKDMEQV 159
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ + K +V + + V + + E++ + N
Sbjct: 160 AKEEQRKAWKLQVFSPALVSPYQYTMTGVGEKYSTWEPTKRELELLQHNPKRRKITTNCT 219
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTFGP---LTIALKKLFAET 279
+RGL NLGNTCF N ++Q L L+D+FL+ E+ P L + LF E
Sbjct: 220 IGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQ-SPNSCLVCEMSTLFQEF 278
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNS 336
+G R+ P + + A GY+Q D+HE L LD L C + +K N+
Sbjct: 279 Y--SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANN 336
Query: 337 PSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKT 396
P+ N I +D +F G + S V C C ST +PF D+SL +P P
Sbjct: 337 PNHCNCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPL 388
Query: 397 QPASRA 402
P S A
Sbjct: 389 SPGSDA 394
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 437 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMMPFMASSKESRMNG 495
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + H++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 496 QYQQPSDSLHNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 543
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++V+ E Y+LFY K
Sbjct: 544 AIITKASIKDVIDSEGYLLFYHK 566
>gi|355727922|gb|AES09355.1| ubiquitin specific peptidase 19 [Mustela putorius furo]
Length = 1009
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 264 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 323
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 324 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 379
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 380 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLSL 438
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 439 PVPLPQKQ 446
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 851 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 909
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 910 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 965
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 966 QVVTRYAYVLFYRR 979
>gi|397476700|ref|XP_003809730.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pan paniscus]
Length = 973
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 310 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 369
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 370 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 429
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 430 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 488
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 489 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 522
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 804 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 858
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 859 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 907
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 908 NQIESKAAYVLFYQR 922
>gi|326927732|ref|XP_003210044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Meleagris
gallopavo]
Length = 917
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 29/186 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L DYFL AE+ PL + + + +AE +
Sbjct: 281 GLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIAEAYAELIKQI 340
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G ++ + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 341 WSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYLEL 398
Query: 338 SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ NG + + + + VD +F G ST+ C +C S ++PF L+L
Sbjct: 399 KDANGRPDSVVAKEAWENHRLRNDSIIVD-IFHGLFKSTLVCPKCSKVSVTFDPFCYLTL 457
Query: 385 PVPTKK 390
P+P K+
Sbjct: 458 PLPLKR 463
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS R KL+ V F +N+ ++ DP +
Sbjct: 776 KKHQQATKKFDLWSLPKILVVHLKRFSYSRYWR-DKLDTVVEFPIRGLNMSEFVCDPRGS 834
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+Y Y L+ V H G M GHY AY KNKV K WY+ D V S
Sbjct: 835 ---SYVYDLIAVSNHYGAMGVGHYTAYA----KNKVNGK-------WYYFDDSSVSLASE 880
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 881 DQIVTKAAYVLFYQR 895
>gi|1276912|gb|AAC50450.1| UHX1 protein [Homo sapiens]
gi|119579692|gb|EAW59288.1| ubiquitin specific peptidase 11, isoform CRA_a [Homo sapiens]
gi|194378128|dbj|BAG57814.1| unnamed protein product [Homo sapiens]
gi|1588732|prf||2209322A UHX1 gene
Length = 690
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 88/183 (48%), Gaps = 29/183 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + QL +YFLN EL F PL +K AE +
Sbjct: 37 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPL--GMKGEIAEAYADLVK 94
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---- 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 95 QAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVEL 154
Query: 336 -----SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
P + + Q V VD F G ST+ C +CG+ S ++PF LS+
Sbjct: 155 CDAAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 213
Query: 385 PVP 387
P+P
Sbjct: 214 PLP 216
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 538 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 592
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 593 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 641
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 642 NQIESKAAYVLFYQR 656
>gi|193786257|dbj|BAG51540.1| unnamed protein product [Homo sapiens]
Length = 689
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 88/183 (48%), Gaps = 29/183 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + QL +YFLN EL F PL +K AE +
Sbjct: 37 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPL--GMKGEIAEAYADLVK 94
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---- 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 95 QAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVEL 154
Query: 336 -----SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
P + + Q V VD F G ST+ C +CG+ S ++PF LS+
Sbjct: 155 CDAAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 213
Query: 385 PVP 387
P+P
Sbjct: 214 PLP 216
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 537 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 591
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 592 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 640
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 641 NQIESKAAYVLFYQR 655
>gi|126335813|ref|XP_001367947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Monodelphis domestica]
Length = 965
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 91/188 (48%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL AE+ PL +K AE E
Sbjct: 300 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDKYEAEINRDNPL--GMKGEIAEAYAELIK 357
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 358 QMWSGRNTQVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 415
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 416 ELKDANGRPDLVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECSKISVTFDPFCYL 474
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 475 TLPLPLKK 482
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P +L +HLKRFS + R KL+ V F +++ ++ DP
Sbjct: 804 KKHQQATKKFDLWSLPKVLVVHLKRFSYNRYWR-DKLDTVVEFPIRDLHMSEFVCDPAAG 862
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK+ K WY+ D V S
Sbjct: 863 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDDSNVSLASE 908
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 909 DQIVTKAAYVLFYQR 923
>gi|219119288|ref|XP_002180407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407880|gb|EEC47815.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 348
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 91/193 (47%), Gaps = 37/193 (19%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIA----LK 273
V GL NLGNTCF NS +Q L A L DYFL + T G L A +K
Sbjct: 2 VVGLRNLGNTCFLNSSLQCLSATIPLTDYFLGYDYRSEINQHNVLGTGGKLATAYAELMK 61
Query: 274 KLFAETKPETGLR----NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEEL 329
+L+ + P +G V+ P F + S APQF G QHD+ ELL LLDG+ E+L
Sbjct: 62 ELWLQAAPVSGYTKISARVVKPTRFKSSLESFAPQFLGTSQHDAQELLSFLLDGI-HEDL 120
Query: 330 ----------------AFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
+R++ + VD +F GQ+ +T+ C+ C H +
Sbjct: 121 NRIPKKPYIEDRDCDGTHDERDAIEAWKNYLRRDKSLVVD-IFQGQLRNTLTCLTCRHVN 179
Query: 374 TVYEPFLDLSLPV 386
+EPF+ LSLP+
Sbjct: 180 VRFEPFMYLSLPL 192
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 41/174 (23%)
Query: 880 KVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDAR 939
++Y ++ +LV N + + + RDATK+ + P IL +HLKRF +
Sbjct: 204 RLYLAEERLVREN---------QWYCSVCQTHRDATKKTDLWIVPAILIVHLKRFKFNEY 254
Query: 940 GRL-SKLNGHVNF--------SEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHY 990
G+L SK N + + S ++ R +P Y L V H+G + GGHY
Sbjct: 255 GQLGSKNNACIRYPVGDSWDLSGVVCSRGSEEPL--------YDLYAVSNHVGDLGGGHY 306
Query: 991 VAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR---CEAYILFYEK 1041
AY N+ WY +D R++ + L+ AY+LFY +
Sbjct: 307 TAY----SLNRFDDH-------WYEFNDTTCRKID-DRTLQGNSSSAYLLFYNR 348
>gi|118097855|ref|XP_414805.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A [Gallus
gallus]
Length = 490
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 124/305 (40%), Gaps = 34/305 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E+
Sbjct: 26 CLYCVFFGC-------FTKKHIHEHAKTKRHNLAIDLLYGGI-YCFMCQDYIYDKDMEQI 77
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSE-IKSESTVVSGS----DLDGN 224
K+ + KL T +S G E K E ++ + + N
Sbjct: 78 A--KEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTN 135
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAE 278
+RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E
Sbjct: 136 CTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQE 195
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRN 335
+G R+ P + + A GY+Q D+HE L LD L C + +K N
Sbjct: 196 F--YSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 253
Query: 336 SPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
+P+ N I +D +F G + S V C C ST +PF D+SL +P P
Sbjct: 254 NPNHCNCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWP 305
Query: 396 TQPAS 400
P S
Sbjct: 306 LSPGS 310
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 355 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 413
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 414 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 461
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 462 AIITKASIKDVLDSEGYLLFYHK 484
>gi|440300667|gb|ELP93114.1| ubiquitin carboxyl-terminal hydrolase, putative [Entamoeba invadens
IP1]
Length = 934
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 88/186 (47%), Gaps = 28/186 (15%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFA 277
V GL NLGNTCF NS +Q LL L ++F A T G L A K L
Sbjct: 313 VCGLRNLGNTCFMNSALQCLLHTMPLNEFFNTANWSDDINTDNPLGTGGKLVNAWKVLLD 372
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR--- 334
+ G +V++PR F I APQF GYQQ DS ELL L+DG+ + +K+
Sbjct: 373 KY---WGGYSVLSPREFKSAIGEFAPQFSGYQQQDSQELLSFLVDGIHEDLNKVKKKPYV 429
Query: 335 ---NSPSEGNGISSNQ--------GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ EG+ + + + + +F GQ S V C C H + ++P++ +S
Sbjct: 430 EIPDYNGEGDEVWAQEEWKRYKMRNDSIITTLFAGQFKSNVVCDVCKHVNLRFDPYVFIS 489
Query: 384 LPVPTK 389
L +P K
Sbjct: 490 LQLPNK 495
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 56/138 (40%), Gaps = 27/138 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K + K++ I IL IHLKRF K++ V+F P D T +
Sbjct: 796 KTHQTCKKKMDIWSTNEILVIHLKRFGSVGGSVRDKISTLVDF-------PIYDLDLTQY 848
Query: 969 -DNYD------YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
YD Y L V H G++ GGHYVA R VG WY +D
Sbjct: 849 VKKYDPKTPPIYNLYAVSNHSGSLGGGHYVASAR-------------VGKDWYDFNDSST 895
Query: 1022 REVSLEEVLRCEAYILFY 1039
++ ++ AY+L+Y
Sbjct: 896 SKIGEASIVSKSAYVLYY 913
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 92/194 (47%), Gaps = 26/194 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y LN + T + AL K F++ E
Sbjct: 483 LNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLTDINTTTSSMKGALIKAFSQVIQE 542
Query: 283 TGLR---NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+V+N S I AP+F GY Q D+ E LR LL+GL + + P
Sbjct: 543 LWENDGDHVVNTSSLKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 602
Query: 338 -----SEGNGISS---------NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
S + + + ++ VD VF GQ+ S++RC C H S +PF DLS
Sbjct: 603 TDIPDSYSDSMKAAESWKRYLRSEDSTIVD-VFVGQLRSSLRCTVCDHVSVTLDPFWDLS 661
Query: 384 LPVPTKKAPSKKTQ 397
LP+P++ + Q
Sbjct: 662 LPIPSRSGTVRLNQ 675
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 67/139 (48%), Gaps = 26/139 (18%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGHVNFSEI-INLRPYMDP-- 963
+++R TK I K P IL IHLKRFS + RG+LS L V+F + L + P
Sbjct: 698 QMRRKCTKSFAIQKFPKILVIHLKRFSPMERFRGKLSVL---VDFPLTGLELSAFAAPRV 754
Query: 964 -GCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR 1022
GCT Y L GV H GT GHY AY K G W+ +D V
Sbjct: 755 QGCT------YNLYGVANHSGTTHSGHYTAYC-----------KHPYSGEWHEYNDSRVT 797
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
VS V+ EAY+LFYE+
Sbjct: 798 PVSARSVVSSEAYVLFYEQ 816
>gi|224088124|ref|XP_002308332.1| predicted protein [Populus trichocarpa]
gi|222854308|gb|EEE91855.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 91/188 (48%), Gaps = 34/188 (18%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIALKKLFAE 278
+RGL NLGNTCF NS +Q L +L DYFL N T G L +A L +
Sbjct: 31 LRGLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYGKEINQENLLGTKGELALAFGDLLS- 89
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP- 337
K T + P F + APQF GY QHDS E L LLDGL E+L R ++ P
Sbjct: 90 -KLWTPRDTPVAPAIFKRKLADFAPQFSGYNQHDSQEFLSFLLDGL-HEDLN-RVKSKPY 146
Query: 338 -----SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
+EG N ++ N + VD + GQ ST+ C C S ++PF+
Sbjct: 147 IAIKDAEGRLDEVVAEEYWRNHLARNDS-IIVD-LCQGQYQSTLVCPACNKKSVTFDPFM 204
Query: 381 DLSLPVPT 388
LSLP+P+
Sbjct: 205 YLSLPLPS 212
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + + P IL +HLKRFS R +KL +V+F + +L Y +
Sbjct: 508 KKPRQARKKLDLWRLPEILVVHLKRFSYSRYIR-NKLETYVDFPIDDFDLSTYTSKKDSQ 566
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
N+ Y L + H G M GHY A++ G + WY D V VS +
Sbjct: 567 FSNH-YVLYAISNHHGGMGCGHYDAFIDLGYRK------------WYEFDDSRVSPVSED 613
Query: 1028 EVLRCEAYILFYEKI 1042
++ AY+LFY ++
Sbjct: 614 DIKTSAAYVLFYRRV 628
>gi|334350493|ref|XP_001371319.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Monodelphis domestica]
Length = 993
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 87/187 (46%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL+ EL F PL +K AE +
Sbjct: 354 GLTNLGNTCFMNSALQCLSNVPPLTEYFLHNHYLKELNFCNPL--GMKGEIAEAYADLVK 411
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G + PR F + A QF GYQQHDS ELL LLDGL E+L K+ E
Sbjct: 412 QAWSGHHRSVVPRMFKTKVGHFASQFLGYQQHDSQELLSFLLDGL-HEDLNRVKKKEYVE 470
Query: 340 GNGISS----------------NQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+ V VD F G ST+ C ECG S ++PF LS
Sbjct: 471 LRDAAGRPDQEVADEAWRNHKRRNDSVIVD-TFHGLFKSTLVCPECGKVSVTFDPFCYLS 529
Query: 384 LPVPTKK 390
+P+P K
Sbjct: 530 VPLPVSK 536
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 25/136 (18%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSE-IINLRPYMDPGC 965
ATK++ + P L IHLKRFS R KL+ V +FSE +I R DP
Sbjct: 838 ATKKLDLWALPEALIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFLIKPRSEADPAP 896
Query: 966 TDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
+D L+ V H G +R GHY + R K+S G W++ D V VS
Sbjct: 897 CKYD-----LIAVSNHYGGLRDGHYTTFAR---------NKDS--GQWHYFDDSSVSPVS 940
Query: 1026 LEEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 941 ESQIESKAAYVLFYQR 956
>gi|359078367|ref|XP_002697125.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Bos taurus]
Length = 1469
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 686 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 745
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 746 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 801
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 802 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 860
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 861 PVPLPQKQ 868
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1273 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCI-GQKE 1331
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1332 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1387
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1388 QVVTRYAYVLFYRR 1401
>gi|167534029|ref|XP_001748693.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772934|gb|EDQ86580.1| predicted protein [Monosiga brevicollis MX1]
Length = 1086
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 36/186 (19%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----------GPLTIA----LKKL 275
GL NLGNTCF NS +Q L + L+ +FL+ G L A L+KL
Sbjct: 421 GLRNLGNTCFMNSALQCLSHCADLRQFFLSGRWQQDLNKNNPIGCDGHLAEAYAELLEKL 480
Query: 276 FAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR- 334
++ T+ + ++P I APQF GYQQHDS EL LLDGL + +K+
Sbjct: 481 WSATQAD------VSPWHLKDTISKFAPQFSGYQQHDSQELTAFLLDGLHEDLNRIQKKP 534
Query: 335 ---NSPSEGNGISSNQ----------GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
+EG +++ + + VD +F GQI ST+ C EC S ++P +
Sbjct: 535 FVEAKEAEGEDVTAAREAWTRHLLRNDSIIVD-LFQGQIKSTLNCPECNKISVTFDPMMY 593
Query: 382 LSLPVP 387
LS+P+P
Sbjct: 594 LSVPIP 599
>gi|411147407|ref|NP_001258643.1| ubiquitin specific peptidase 19 [Sus scrofa]
Length = 1341
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 558 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 617
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 618 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 673
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 674 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 732
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 733 PVPLPQKQ 740
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1145 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1203
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1204 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1259
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1260 QVVTRYAYVLFYRR 1273
>gi|358418211|ref|XP_592460.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Bos taurus]
Length = 1467
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 684 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 743
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 744 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 799
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 800 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 858
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 859 PVPLPQKQ 866
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1271 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCI-GQKE 1329
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1330 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1385
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1386 QVVTRYAYVLFYRR 1399
>gi|313234636|emb|CBY10591.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 27/164 (16%)
Query: 892 NCESEESKVEE------INSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+C S+ +K E+ IN K +++++K++ I++ P + +HLKRF Q A G SK+
Sbjct: 327 DCLSKFTKKEQLGNASKINCKKCGKRQESSKQLTISRLPVVACLHLKRFEQTATGSRSKV 386
Query: 946 NGHVNFSEIINLRPYM--------DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGG 997
V+F + +++ P+M P D +Y Y L VV H+G ++ GHY +++R
Sbjct: 387 ATPVSFPKTLDMGPFMSSARNTSLSPEFCDSAHYKYELFAVVNHMGNLQSGHYTSFIRQT 446
Query: 998 PKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
W+ D + + S+E+VL EAY+LFY K
Sbjct: 447 SS-------------WFRCDDSLITKASIEQVLNSEAYLLFYHK 477
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 221 LDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN--------AELTFGPLTIAL 272
+DG + +RGL N GNTCF N V+Q L L+DYFL +E++ +
Sbjct: 150 VDGRSTLGLRGLVNQGNTCFMNVVIQALTHSPVLRDYFLMEKHPRCSPSEIS-SCIVCEF 208
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
++F E N + P + + GY+Q D+HE L +LD +
Sbjct: 209 SQIFQEFFSNEN-SNPMTPYRLLLLVWRNSEYLAGYEQQDAHEFLIAVLDMI-------H 260
Query: 333 KRNSPS-EGNGI--SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+R P EG I + + +D VF G + S V C +CG+ S +P D+SL +P
Sbjct: 261 ERLQPRIEGGSIDLTGHAERSIIDQVFTGYMQSNVVCNQCGNISQTIDPLRDISLDIPQV 320
Query: 390 KAP------SKKTQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSL 443
+ SK T+ +K+ KK G+ R + +K ++ L + Q+
Sbjct: 321 PSASLMDCLSKFTKKEQLGNASKINCKKCGK-RQESSKQLTISRLPVVACLHLKRFEQTA 379
Query: 444 TESTAPLSENV 454
T S + ++ V
Sbjct: 380 TGSRSKVATPV 390
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 26/194 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y LN + + + AL K F++ E
Sbjct: 637 LNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIHE 696
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE------------ 327
G V+N + I AP+F GY Q D+ E LR LL+GL +
Sbjct: 697 LWEVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 756
Query: 328 ----ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E+ + + ++ + VD VF GQ+ S++ C C H S +PF DLS
Sbjct: 757 TDIPEMYTDSQKAVESWKRYLRSEDSMIVD-VFVGQLRSSLHCTSCDHVSVTLDPFWDLS 815
Query: 384 LPVPTKKAPSKKTQ 397
LP+P + K +Q
Sbjct: 816 LPIPARSGTVKLSQ 829
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMD---PG 964
+++R TK I K P IL IHLKRFS R R SKLN V+F ++L + PG
Sbjct: 852 QMRRKCTKSFSIQKFPKILVIHLKRFSPMERFR-SKLNVMVDFPLTGLDLSAFAAPRVPG 910
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
CT Y L GV H GT GHY AY K G W+ +D V V
Sbjct: 911 CT------YNLYGVANHSGTTHSGHYTAYC-----------KHPYSGEWHEYNDSRVSVV 953
Query: 1025 SLEEVLRCEAYILFYEK 1041
V+ EAY+LFYE+
Sbjct: 954 PARSVVSNEAYVLFYEQ 970
>gi|410056407|ref|XP_003954471.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11, partial [Pan troglodytes]
Length = 787
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 310 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 369
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 370 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 429
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 430 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 488
Query: 387 P 387
P
Sbjct: 489 P 489
>gi|55846814|gb|AAV67411.1| ubiquitin-specific protease 11 [Macaca fascicularis]
Length = 679
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 34 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 93
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 94 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 153
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 154 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 212
Query: 387 P 387
P
Sbjct: 213 P 213
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 535 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 589
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 590 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 638
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 639 NQIESKAAYVLFYQR 653
>gi|126335815|ref|XP_001367983.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Monodelphis domestica]
Length = 920
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 91/188 (48%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL AE+ PL +K AE E
Sbjct: 255 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDKYEAEINRDNPL--GMKGEIAEAYAELIK 312
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 313 QMWSGRNTQVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 370
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 371 ELKDANGRPDLVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECSKISVTFDPFCYL 429
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 430 TLPLPLKK 437
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P +L +HLKRFS + R KL+ V F +++ ++ DP
Sbjct: 759 KKHQQATKKFDLWSLPKVLVVHLKRFSYNRYWR-DKLDTVVEFPIRDLHMSEFVCDPAAG 817
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK+ K WY+ D V S
Sbjct: 818 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDDSNVSLASE 863
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 864 DQIVTKAAYVLFYQR 878
>gi|341889009|gb|EGT44944.1| hypothetical protein CAEBREN_17498 [Caenorhabditis brenneri]
Length = 1056
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKPE- 282
GL N+GNTCF N+++Q L+ +L+++FL PL L + FA+ +
Sbjct: 456 GLRNIGNTCFMNAILQMLVNNVELREFFLREHYQSEINESNPLGSEGRLARAFADFMQQM 515
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG- 340
+G I P + KA QF + QHD+HE L LLDGL E R + P G
Sbjct: 516 WSGRHKAIEPIQIKNIVAEKASQFANFAQHDAHEFLSFLLDGL--HEDVNRVKKKPLTGT 573
Query: 341 -----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
N I N +FVD +F GQ+ S V+C C S ++PF+ L
Sbjct: 574 VESHGRHDLDVSNEAWRNHILRNDS-IFVD-LFHGQLKSHVQCPNCDRVSITFDPFVYLP 631
Query: 384 LPVPTKK 390
+P P +K
Sbjct: 632 VPFPKRK 638
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 953 EIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGV 1012
E +++ P++ +H++ Y L GVV H G+ GHYV+ R + K K E
Sbjct: 949 ESLDMSPFLSDTSPNHNSTIYDLTGVVCHNGSSYFGHYVSMGRLADFDSSKTKIE----- 1003
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYE 1040
W D V S + +AY+LFY+
Sbjct: 1004 WRQFDDSMVTRQSTGNLQTDDAYLLFYK 1031
>gi|122692453|ref|NP_001073777.1| ubiquitin carboxyl-terminal hydrolase 11 [Bos taurus]
gi|119936039|gb|ABM06061.1| ubiquitin specific protease 11 [Bos taurus]
gi|296470784|tpg|DAA12899.1| TPA: ubiquitin specific peptidase 11 [Bos taurus]
Length = 756
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 108/234 (46%), Gaps = 32/234 (13%)
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF- 265
+ ST+ D G + GL NLGNTCF NS +Q L + QL +YFL EL F
Sbjct: 85 TRSTLEEEEDFQGQPG--ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFC 142
Query: 266 GPLTIA--LKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
PL + + + +A+ + +G I P+ F + A QF GYQQHDS ELL LL
Sbjct: 143 NPLGMKGEIAQAYADLVKQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLL 202
Query: 322 DGLCSEELAFRKRN---------SPSEGNGISSNQG------PVFVDYVFGGQIASTVRC 366
DGL + +K+ P + + Q V VD F G ST+ C
Sbjct: 203 DGLHEDLNRIKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVC 261
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
+CG+ S ++PF LS+P+P + P + ++ +L K G+I
Sbjct: 262 PDCGNVSVTFDPFCYLSVPLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 315
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P D +
Sbjct: 604 ATKKLDLWMLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQND---S 658
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 659 SRELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDSSVSPVTE 707
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 708 NQIESKAAYVLFYQR 722
>gi|312596873|ref|NP_001186090.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Homo sapiens]
Length = 1384
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 601 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 660
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 661 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 716
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 717 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 775
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 776 PVPLPQKQ 783
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1188 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1246
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1247 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1302
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1303 QVVTRYAYVLFYRR 1316
>gi|194390786|dbj|BAG62152.1| unnamed protein product [Homo sapiens]
Length = 1372
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 589 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 648
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 649 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 704
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 705 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 763
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 764 PVPLPQKQ 771
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1176 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1234
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1235 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1290
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1291 QVVTRYAYVLFYRR 1304
>gi|296474940|tpg|DAA17055.1| TPA: ubiquitin specific peptidase 19 [Bos taurus]
Length = 1238
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 455 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 514
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 515 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 570
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 571 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 629
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 630 PVPLPQKQ 637
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1042 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCI-GQKE 1100
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1101 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1156
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1157 QVVTRYAYVLFYRR 1170
>gi|148689349|gb|EDL21296.1| ubiquitin specific peptidase 19, isoform CRA_d [Mus musculus]
Length = 1338
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 555 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 614
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 615 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 670
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 671 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 729
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 730 PVPLPQKQ 737
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1142 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1200
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1201 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1256
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1257 QVVTRYAYVLFYRR 1270
>gi|403291358|ref|XP_003936762.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Saimiri
boliviensis boliviensis]
Length = 1482
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 699 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 758
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 759 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 814
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 815 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 873
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 874 PVPLPQKQ 881
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1286 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1344
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1345 EQLSSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1400
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1401 QVVTRYAYVLFYRR 1414
>gi|148745123|gb|AAI42728.1| USP19 protein [Homo sapiens]
Length = 1449
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 666 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 725
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 726 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 781
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 782 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 840
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 841 PVPLPQKQ 848
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1253 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1311
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1312 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1367
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1368 QVVTRYAYVLFYRR 1381
>gi|158300513|ref|XP_320409.4| AGAP012119-PA [Anopheles gambiae str. PEST]
gi|157013195|gb|EAA00215.4| AGAP012119-PA [Anopheles gambiae str. PEST]
Length = 527
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 116/290 (40%), Gaps = 43/290 (14%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
++ CL C ++AC G +H+ H + T+H + ++ L +C+ C I K
Sbjct: 61 LYCCLHCIYFACKG--------AHITEHYKHTKHFMALELCYGML-YCYQCRDFIYHSKC 111
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ E L E S+D +W EI+ +
Sbjct: 112 QTIAERHLWL------------EARSLDKSLSWRPWSPSRLEIELLLKNPKRRHVTALTS 159
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL------NAELTFGPLTIALKKLFAETK 280
+RGL NLG+TCF N ++Q L+ L+DYFL A+ L + +LF E
Sbjct: 160 IGLRGLLNLGSTCFMNCIVQALIHTPLLRDYFLAELHECTAKTAAKCLVCEVSRLFQEFY 219
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
+G R ++ I + A GY+Q D+HE LD L R+ +
Sbjct: 220 --SGARGPLSLHRLLHLIWNHARHLAGYEQQDAHEFFIATLDVL--------HRHCKTGS 269
Query: 341 NGISSNQGP------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
N + P +D +F G + S V C C ST +PF D+SL
Sbjct: 270 NYLQQQAEPNQTQCNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISL 319
>gi|148744351|gb|AAI42661.1| USP19 protein [Homo sapiens]
Length = 1447
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 664 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 723
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 724 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 779
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 780 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 838
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 839 PVPLPQKQ 846
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1251 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1309
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1310 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1365
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1366 QVVTRYAYVLFYRR 1379
>gi|402591058|gb|EJW84988.1| ubiquitin carboxyl-terminal hydrolase, partial [Wuchereria
bancrofti]
Length = 963
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 31/190 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTIA--LKKLFAETKPET 283
GL N+GNTCF NS +Q L+ +LQ YF PL L ++FAE +
Sbjct: 266 GLRNIGNTCFMNSTLQMLVNCKELQVYFSGGYYKRDINVMNPLGFGGRLAEVFAEFMKQM 325
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G+ P + KA QF + QHD+HE L +LDGL E+L R R P+ N
Sbjct: 326 WNGMNRAYEPTKIKELVAEKATQFANFAQHDAHEFLSFVLDGL-HEDLN-RVRVKPT-TN 382
Query: 342 GISSNQGP------------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
I + P +FVD +F GQ+ S ++C +C S ++PF L+
Sbjct: 383 TIEAEGRPDIEVSREAWRNHLLRNDSIFVD-LFHGQLKSRLQCPKCNQISITFDPFAYLA 441
Query: 384 LPVPTKKAPS 393
+P P +K S
Sbjct: 442 VPFPKEKRSS 451
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 888 LVAGNCESEESKVEE-INSKIVKVKRDATKRVLINKAPPILTIHLKRF----SQDARGRL 942
++A E+E K EE K +ATK++++ + PPIL I LKRF S R
Sbjct: 793 MLAMFSETERLKPEESWYCSKCKEHVEATKQLVLYRLPPILIIQLKRFIYTTSLMTVHRR 852
Query: 943 SKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK 1001
SK + V + + ++L ++ Y L GVV H G+ GHY++ G
Sbjct: 853 SKDDRPVRYPLDNLDLAQFLSDTAPSRQETKYDLTGVVCHSGSSYFGHYISL---GRLLS 909
Query: 1002 VKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
+ K + W + D V L V +AY+LFY++
Sbjct: 910 IDGKTTEID--WRNFDDSIVTRAQLSRVQNDDAYLLFYKQ 947
>gi|119936054|gb|ABM06064.1| ubiquitin specific protease 11 [Bos taurus]
Length = 802
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 108/234 (46%), Gaps = 32/234 (13%)
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF- 265
+ ST+ D G + GL NLGNTCF NS +Q L + QL +YFL EL F
Sbjct: 126 TRSTLEEEEDFQGQPG--ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFC 183
Query: 266 GPLTIA--LKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
PL + + + +A+ + +G I P+ F + A QF GYQQHDS ELL LL
Sbjct: 184 NPLGMKGEIAQAYADLVKQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLL 243
Query: 322 DGLCSEELAFRKRN---------SPSEGNGISSNQG------PVFVDYVFGGQIASTVRC 366
DGL + +K+ P + + Q V VD F G ST+ C
Sbjct: 244 DGLHEDLNRIKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVC 302
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
+CG+ S ++PF LS+P+P + P + ++ +L K G+I
Sbjct: 303 PDCGNVSVTFDPFCYLSVPLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 356
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P D +
Sbjct: 650 ATKKLDLWMLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQND---S 704
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 705 SRELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDSSVSPVTE 753
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 754 NQIESKAAYVLFYQR 768
>gi|301770391|ref|XP_002920596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Ailuropoda melanoleuca]
Length = 1222
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 439 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 498
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 499 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 554
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 555 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 613
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 614 PVPLPQKQ 621
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1026 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1084
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1085 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1140
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1141 QVVTRYAYVLFYRR 1154
>gi|281338356|gb|EFB13940.1| hypothetical protein PANDA_009359 [Ailuropoda melanoleuca]
Length = 1359
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 539 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 598
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 599 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 654
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 655 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 713
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 714 PVPLPQKQ 721
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1126 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1184
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1185 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1240
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1241 QVVTRYAYVLFYRR 1254
>gi|242039019|ref|XP_002466904.1| hypothetical protein SORBIDRAFT_01g016396 [Sorghum bicolor]
gi|241920758|gb|EER93902.1| hypothetical protein SORBIDRAFT_01g016396 [Sorghum bicolor]
Length = 267
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 121/296 (40%), Gaps = 44/296 (14%)
Query: 80 GVGDRR--GKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQ 137
G G R+ KK K + KG + + +AIWVCL CG CG G PQ H+ H R
Sbjct: 14 GGGQRKQTAKKKKSRATVTKGQA--NDQAIWVCLHCGRMFCG--GRDKVPQGHIRPHYRD 69
Query: 138 TRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVED 197
H E+P +CF C + + + KL++ + S E
Sbjct: 70 NGHLWAASPEDPTSIYCFKCKKEVSISFLD------------FKLMETKPVTSKSAAAE- 116
Query: 198 AWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDY 257
E V++ A +V+GL N GNTC+FN+V+Q+LLA+S ++
Sbjct: 117 --------------EGLVIT------KARNIVKGLKNYGNTCYFNAVIQSLLALSSMRAI 156
Query: 258 FLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELL 317
L +++ G L + L++LF T+ + +N QF + SH+
Sbjct: 157 ILRSDVQAGHLAMQLRELFLMTEASSRTAAELNIGRLLHAFLDINSQFADKKMQCSHDCF 216
Query: 318 RCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
L EE+ KR + S +++F G STV C HSS
Sbjct: 217 VSFRWSLHWEEVEEWKRAKDA-----SIEDHITIPNFIFIGTQCSTVTGKVCKHSS 267
>gi|171686156|ref|XP_001908019.1| hypothetical protein [Podospora anserina S mat+]
gi|170943039|emb|CAP68692.1| unnamed protein product [Podospora anserina S mat+]
Length = 1516
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 48/206 (23%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE------------------LTFGPLTIAL 272
GL NLGNTC+ NS +Q L A+ +L YFL E L++G L L
Sbjct: 442 GLQNLGNTCYMNSALQCLRAVEELTKYFLTHEAKKEINTDNPLAHGGDVALSYGRL---L 498
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEEL--A 330
++++ + P N + PR F I AP F GY Q DS E L LLDGL E+L
Sbjct: 499 EEIYKDPTP-----NSVAPRQFKSVIGRYAPAFSGYGQQDSQEFLGWLLDGL-QEDLNRI 552
Query: 331 FRKR------------NSPS-------EGNGISSNQGPVFVDYVFGGQIASTVRCVECGH 371
RK N+P+ + I+ + + +F G ST+ C EC
Sbjct: 553 LRKPYIEKPDSTDEMINNPAAIREMALQVWDITKRRDDSVISDLFTGLYKSTLVCPECNK 612
Query: 372 SSTVYEPFLDLSLPVPTKKAPSKKTQ 397
S ++PF +L+LP+P + S++ +
Sbjct: 613 ISITFDPFTNLTLPLPMANSWSREIR 638
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 17/136 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRP-YMDPGCT 966
K R A+K+ + K P IL +HLKRFS R KL+ V+F E ++L +D
Sbjct: 1129 KEHRRASKKFDLWKTPDILVVHLKRFSSVGY-RREKLDILVDFPVEGLDLTSRVIDKEDG 1187
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS- 1025
+ YD L+ V +H G + GGHY A KAK + G WY +D V + S
Sbjct: 1188 KQEIYD--LIAVDDHWGGLGGGHYTA----------KAKNFN-DGSWYEYNDTGVSKCSD 1234
Query: 1026 LEEVLRCEAYILFYEK 1041
++V+ AY+LFY +
Sbjct: 1235 PQKVVSAAAYLLFYRR 1250
>gi|426257123|ref|XP_004022184.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 2 [Ovis
aries]
Length = 802
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFL EL F PL + + + +A+ +
Sbjct: 144 GLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLVKQA 203
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P+ F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 204 WSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 263
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 264 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 322
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 323 PVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 356
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P D
Sbjct: 650 ATKKLDLWMLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNDSA-- 705
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 706 -RELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDSSVSPVTE 753
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 754 NQIESKAAYVLFYQR 768
>gi|402860147|ref|XP_003894496.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Papio anubis]
Length = 1372
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 589 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 648
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 649 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 704
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 705 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 763
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 764 PVPLPQKQ 771
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1176 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1234
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1235 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1290
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1291 QVVTRYAYVLFYRR 1304
>gi|402860145|ref|XP_003894495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Papio anubis]
Length = 1384
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 601 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 660
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 661 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 716
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 717 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 775
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 776 PVPLPQKQ 783
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1188 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1246
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1247 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1302
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1303 QVVTRYAYVLFYRR 1316
>gi|410951153|ref|XP_003982264.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Felis catus]
Length = 1222
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 439 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 498
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 499 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 554
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 555 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 613
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 614 PVPLPQKQ 621
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1026 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1084
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1085 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1140
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1141 QVVTRYAYVLFYRR 1154
>gi|312596875|ref|NP_001186091.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 3 [Homo sapiens]
Length = 1372
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 589 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 648
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 649 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 704
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 705 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 763
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 764 PVPLPQKQ 771
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1176 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1234
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1235 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1290
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1291 QVVTRYAYVLFYRR 1304
>gi|338714694|ref|XP_001498305.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 19 isoform 1 [Equus caballus]
Length = 1404
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 621 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 680
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 681 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 736
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 737 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 795
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 796 PVPLPQKQ 803
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1208 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1266
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1267 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1322
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1323 QVVTRYAYVLFYRR 1336
>gi|426340514|ref|XP_004034174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Gorilla gorilla gorilla]
Length = 1384
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 601 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 660
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 661 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 716
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 717 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 775
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 776 PVPLPQKQ 783
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1188 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1246
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1247 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1302
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1303 QVVTRYAYVLFYRR 1316
>gi|395733810|ref|XP_002813806.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pongo abelii]
Length = 1411
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 591 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 650
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 651 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 706
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 707 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 765
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 766 PVPLPQKQ 773
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1178 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1236
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1237 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1292
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1293 QVVTRYAYVLFYRR 1306
>gi|426340516|ref|XP_004034175.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Gorilla gorilla gorilla]
Length = 1372
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 589 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 648
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 649 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 704
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 705 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 763
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 764 PVPLPQKQ 771
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1176 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1234
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1235 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1290
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1291 QVVTRYAYVLFYRR 1304
>gi|402860151|ref|XP_003894498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 4
[Papio anubis]
Length = 1318
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 557
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 558 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 613
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 614 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 672
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 673 PVPLPQKQ 680
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1085 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1143
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1144 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1199
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1200 QVVTRYAYVLFYRR 1213
>gi|402860149|ref|XP_003894497.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Papio anubis]
Length = 1419
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|390475153|ref|XP_003734910.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 19 [Callithrix jacchus]
Length = 1489
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 706 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 765
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 766 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 821
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 822 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 880
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 881 PVPLPQKQ 888
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1293 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1351
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1352 EQLPNYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1407
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1408 QVVTRYAYVLFYRR 1421
>gi|332215896|ref|XP_003257078.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Nomascus leucogenys]
Length = 1372
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 589 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 648
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 649 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 704
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 705 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 763
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 764 PVPLPQKQ 771
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1176 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1234
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1235 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1290
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1291 QVVTRYAYVLFYRR 1304
>gi|119585361|gb|EAW64957.1| ubiquitin specific peptidase 19, isoform CRA_b [Homo sapiens]
Length = 1283
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 500 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 559
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 560 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 615
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 616 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 674
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 675 PVPLPQKQ 682
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1087 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1145
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1146 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1201
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1202 QVVTRYAYVLFYRR 1215
>gi|49022846|dbj|BAC65678.4| mKIAA0891 protein [Mus musculus]
Length = 1362
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 579 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 638
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 639 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 694
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 695 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 753
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 754 PVPLPQKQ 761
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1166 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1224
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1225 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1280
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1281 QVVTRYAYVLFYRR 1294
>gi|328872047|gb|EGG20417.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 1393
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 88/185 (47%), Gaps = 27/185 (14%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIA--------LKKLFAETK 280
+ GL NLGNTCF NS +Q L L Y LN E L + L K +A
Sbjct: 654 IAGLDNLGNTCFMNSSLQCLSNAIPLTRYLLN-EKHLEDLNVDNPLGCNGDLAKEYANLI 712
Query: 281 PET--GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL------CSEELAFR 332
+ G + PR+F I APQF GYQQHDS ELL LLDGL ++ F
Sbjct: 713 KQIWKGDMTSVGPRNFKTAIERFAPQFMGYQQHDSQELLAFLLDGLHEDMNQVKKKPFFE 772
Query: 333 KRNSPSEGNGISSNQ---------GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
++ + I +N+ + VD+ F Q+ S + C EC + S ++PF+ LS
Sbjct: 773 GKDYDGRADEIIANEQWEMHRARNKSIIVDW-FQAQLKSKLICPECENISITFDPFMYLS 831
Query: 384 LPVPT 388
LP+P
Sbjct: 832 LPLPV 836
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 60/139 (43%), Gaps = 25/139 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
KV + ATK+ I APPIL IHLKRFS R KL+ V F P D + H
Sbjct: 1127 KVHQQATKKFDIWSAPPILVIHLKRFSYKKAWR-EKLDTLVRF-------PIKDLDLSSH 1178
Query: 969 ------DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVR 1022
Y L V H G+M GGHY AY +N+ W D + +
Sbjct: 1179 VLSPSDSPPVYDLFAVSNHYGSMGGGHYTAYALNELENQ-----------WVKFDDSHTQ 1227
Query: 1023 EVSLEEVLRCEAYILFYEK 1041
V V+ AY+LFY +
Sbjct: 1228 NVDASNVITDAAYVLFYRR 1246
>gi|270265851|ref|NP_663382.2| ubiquitin carboxyl-terminal hydrolase 19 isoform 5 [Mus musculus]
Length = 1299
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 516 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 575
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 576 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 631
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 632 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 690
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 691 PVPLPQKQ 698
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1103 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1161
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1162 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1217
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1218 QVVTRYAYVLFYRR 1231
>gi|312596871|ref|NP_001186089.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 1 [Homo sapiens]
Length = 1419
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|170582208|ref|XP_001896026.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158596854|gb|EDP35126.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 968
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 31/190 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTIA--LKKLFAETKPET 283
GL N+GNTCF NS +Q L+ +LQ YF PL L ++FAE +
Sbjct: 271 GLRNIGNTCFMNSTLQMLVNCKELQVYFSGGYYKRDINIMNPLGFGGRLAEVFAEFMKQM 330
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G+ P + KA QF + QHD+HE L +LDGL E+L R R P+ N
Sbjct: 331 WNGMNRAYEPTKIKELVAEKATQFANFAQHDAHEFLSFVLDGL-HEDLN-RVRVKPT-TN 387
Query: 342 GISSNQGP------------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
I + P +FVD +F GQ+ S ++C +C S ++PF L+
Sbjct: 388 TIEAEGRPDIEVSREAWHNHLLRNDSIFVD-LFHGQLKSRLQCPKCNQISITFDPFAYLA 446
Query: 384 LPVPTKKAPS 393
+P P +K S
Sbjct: 447 VPFPKEKRSS 456
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 888 LVAGNCESEESKVEE-INSKIVKVKRDATKRVLINKAPPILTIHLKRF----SQDARGRL 942
++A E+E K EE K +ATK++++ + PPIL I LKRF S R
Sbjct: 798 MLAMFSETERLKPEESWYCSKCKEHVEATKQLVLYRLPPILIIQLKRFIYTTSLMTVHRR 857
Query: 943 SKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK 1001
SK + V + + ++L ++ Y L GVV H G+ GHY++ R
Sbjct: 858 SKDDRPVRYPLDNLDLAQFLSDTAPSGQETKYDLTGVVCHSGSSYFGHYISLGR-----L 912
Query: 1002 VKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
+ +++ W + D V L V +AY+LFY++
Sbjct: 913 LSIDGKTIEIDWRNFDDSIVTRAQLSRVQNDDAYLLFYKQ 952
>gi|426340518|ref|XP_004034176.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Gorilla gorilla gorilla]
Length = 1419
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|355746704|gb|EHH51318.1| hypothetical protein EGM_10672 [Macaca fascicularis]
Length = 1419
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|387541264|gb|AFJ71259.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 4 [Macaca mulatta]
Length = 1318
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 557
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 558 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 613
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 614 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 672
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 673 PVPLPQKQ 680
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1085 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1143
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1144 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1199
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1200 QVVTRYAYVLFYRR 1213
>gi|332817139|ref|XP_003309900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pan
troglodytes]
Length = 1372
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 589 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 648
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 649 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 704
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 705 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 763
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 764 PVPLPQKQ 771
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1176 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1234
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1235 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1290
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1291 QVVTRYAYVLFYRR 1304
>gi|148689348|gb|EDL21295.1| ubiquitin specific peptidase 19, isoform CRA_c [Mus musculus]
Length = 1399
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 579 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 638
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 639 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 694
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 695 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 753
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 754 PVPLPQKQ 761
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1166 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1224
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1225 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1280
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1281 QVVTRYAYVLFYRR 1294
>gi|355559647|gb|EHH16375.1| hypothetical protein EGK_11647 [Macaca mulatta]
Length = 1419
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|332215900|ref|XP_003257080.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 4
[Nomascus leucogenys]
Length = 1318
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 557
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 558 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 613
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 614 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 672
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 673 PVPLPQKQ 680
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1085 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1143
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1144 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1199
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1200 QVVTRYAYVLFYRR 1213
>gi|270265848|ref|NP_001161845.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 4 [Mus musculus]
Length = 1322
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 539 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 598
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 599 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 654
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 655 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 713
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 714 PVPLPQKQ 721
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1126 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1184
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1185 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1240
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1241 QVVTRYAYVLFYRR 1254
>gi|270265843|ref|NP_001161843.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Mus musculus]
gi|148689346|gb|EDL21293.1| ubiquitin specific peptidase 19, isoform CRA_a [Mus musculus]
Length = 1324
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 541 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 600
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 601 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 656
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 657 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 715
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 716 PVPLPQKQ 723
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1128 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1186
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1187 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1242
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1243 QVVTRYAYVLFYRR 1256
>gi|332215894|ref|XP_003257077.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Nomascus leucogenys]
Length = 1384
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 601 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 660
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 661 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 716
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 717 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 775
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 776 PVPLPQKQ 783
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1188 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1246
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1247 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1302
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1303 QVVTRYAYVLFYRR 1316
>gi|270265845|ref|NP_001161844.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 3 [Mus musculus]
gi|74144320|dbj|BAE36025.1| unnamed protein product [Mus musculus]
Length = 1323
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 540 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 599
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 600 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 655
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 656 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 714
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 715 PVPLPQKQ 722
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1127 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1185
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1186 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1241
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1242 QVVTRYAYVLFYRR 1255
>gi|332215898|ref|XP_003257079.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Nomascus leucogenys]
Length = 1419
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|194378288|dbj|BAG57894.1| unnamed protein product [Homo sapiens]
Length = 1419
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|74179058|dbj|BAE42739.1| unnamed protein product [Mus musculus]
Length = 1322
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 539 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 598
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 599 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 654
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 655 -ETVDSDGRPDEVVTEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 713
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 714 PVPLPQKQ 721
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1126 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1184
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1185 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1240
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1241 QVVTRYAYVLFYRR 1254
>gi|410263404|gb|JAA19668.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296340|gb|JAA26770.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1382
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 26/194 (13%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL------TFGPLTIALKKLFAETKPE 282
+ GL N+GNTCF NSV+Q L L +Y LN + + + AL K F++ E
Sbjct: 639 LNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIHE 698
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE------------ 327
G V+N + I AP+F GY Q D+ E LR LL+GL +
Sbjct: 699 LWEVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIH 758
Query: 328 ----ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
E+ + + ++ + VD VF GQ+ S++ C C H S +PF DLS
Sbjct: 759 TDIPEMYTDSQKAVESWKRYLRSEDSMIVD-VFVGQLRSSLHCTSCDHVSVTLDPFWDLS 817
Query: 384 LPVPTKKAPSKKTQ 397
LP+P + K +Q
Sbjct: 818 LPIPARSGTVKLSQ 831
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMD---PG 964
+++R TK I K P IL IHLKRFS R R SKLN V+F ++L + PG
Sbjct: 854 QMRRKCTKSFSIQKFPKILVIHLKRFSPMERFR-SKLNVMVDFPLTGLDLSAFAAPRVPG 912
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREV 1024
CT Y L GV H GT GHY AY K G W+ +D V V
Sbjct: 913 CT------YNLYGVANHSGTTHSGHYTAYC-----------KHPYSGEWHEYNDSRVSVV 955
Query: 1025 SLEEVLRCEAYILFYEK 1041
V+ EAY+LFYE+
Sbjct: 956 PARSVVSNEAYVLFYEQ 972
>gi|332817137|ref|XP_003309899.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pan
troglodytes]
gi|410263400|gb|JAA19666.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296336|gb|JAA26768.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1384
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 601 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 660
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 661 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 716
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 717 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 775
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 776 PVPLPQKQ 783
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1188 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1246
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1247 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1302
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1303 QVVTRYAYVLFYRR 1316
>gi|410351351|gb|JAA42279.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1386
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 603 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 662
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 663 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 718
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 719 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 777
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 778 PVPLPQKQ 785
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1190 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1248
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1249 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1304
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1305 QVVTRYAYVLFYRR 1318
>gi|410225092|gb|JAA09765.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410351349|gb|JAA42278.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1382
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|397495156|ref|XP_003818426.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1 [Pan
paniscus]
Length = 1419
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|410225088|gb|JAA09763.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410351345|gb|JAA42276.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1384
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 601 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 660
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 661 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 716
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 717 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 775
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 776 PVPLPQKQ 783
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1188 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1246
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1247 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1302
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1303 QVVTRYAYVLFYRR 1316
>gi|226480822|emb|CAX73508.1| Ubiquitin carboxyl-terminal hydrolase 2 [Schistosoma japonicum]
Length = 496
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 207 SEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNL-----LAMSQLQDYFLNA 261
S I + ++ + GS L + +V GL NLGNTCF NS++Q L L L+D +L
Sbjct: 138 SPIHTTASSLVGSHLSYHRGGLV-GLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRYLKD 196
Query: 262 ELTFGPLTIALKKLFAETKPETGLRNVIN----PRSFFGCICSKAPQFKGYQQHDSHELL 317
+ L + +A+ E ++ N P F I AP+F GY Q DS E L
Sbjct: 197 INKSSSMNGMLFRSYADLMKEIWDPDMANSSTSPSRFKSQIQRFAPRFMGYSQQDSQEFL 256
Query: 318 RCLLDGLCSEELAFRKRNSPSEGNGISSNQGP------------------VFVDYVFGGQ 359
R +L+GL E +KR P++ + + ++ P VD +F GQ
Sbjct: 257 RYVLEGLHMEVNRVQKRPIPTKPDYEAEDRLPDNEKANLYWRRYLSMDNSEIVD-LFVGQ 315
Query: 360 IASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ ST+ C +C ST ++PF DLSLP+P K
Sbjct: 316 LMSTLECADCSFKSTTFDPFWDLSLPIPKK 345
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K +R TK I K P IL +HLKRFS + R R SK++ V++ ++L + CT
Sbjct: 375 KTRRRCTKSFSIQKFPQILVLHLKRFSGE-RFR-SKMSVMVDYPLRNLDLIEFATSSCT- 431
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y+L V H G++ GHY A + G W+ +D +V +S
Sbjct: 432 QKSAQYKLYAVSNHSGSVYTGHYTA-----------SCLNPYTGDWHSFNDSHVHLISEN 480
Query: 1028 EVLRCEAYILFY 1039
+ E Y+LFY
Sbjct: 481 SAISSEGYVLFY 492
>gi|328717614|ref|XP_001948897.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Acyrthosiphon pisum]
Length = 530
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 36/221 (16%)
Query: 853 CSQESITDQ---DEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK 909
C Q ++ Q + CSV S ++A +V D+++ C + K + I
Sbjct: 314 CPQATLQFQPNYKDNECSVLTCLSQ-FTASEVLSDDNKISCKRCTEQPKKKANVEKTIY- 371
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
+T ++LI+ P IL +HLKRF Q K+ +V+F I+++ PY C D
Sbjct: 372 --FQSTIQMLISSPPAILILHLKRF-QMCNSITRKITTNVSFQWILDIAPYCSVKCQDKL 428
Query: 968 ---HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESV--------------- 1009
+ Y L GVVEH G + GHY++YV+ K + + S
Sbjct: 429 SPGQNRILYSLYGVVEHNGFLHSGHYLSYVKVRDSVKDDSYRYSFLEGSKTKPPKVIDGN 488
Query: 1010 --------GGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY SD VR+V+ V C+AY+LFYE+I
Sbjct: 489 DDPSHLAPSGTWYCVSDSMVRQVTPTVVQSCQAYLLFYERI 529
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 305 FKGYQQHDSHELLRCLLDGLCSEELAFRKRN-----------SPSE----GNGISSNQGP 349
F GY QHDSHE+LR LLD + ++L KR PSE I G
Sbjct: 2 FIGYGQHDSHEVLRHLLDSVRDDDLKRYKRTIIHHYSLSMKVEPSEVDEKNTAIIKELGK 61
Query: 350 VFVDYV-------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA 391
DYV F G++ S ++C CG+ S V E FLDLSLP+ K
Sbjct: 62 KLQDYVVLHPDHVFKGELLSVIQCQNCGYKSEVTESFLDLSLPITVDKT 110
>gi|4240271|dbj|BAA74914.1| KIAA0891 protein [Homo sapiens]
Length = 1371
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 551 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 610
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 611 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 666
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 667 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 725
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 726 PVPLPQKQ 733
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1138 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1196
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1197 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1252
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1253 QVVTRYAYVLFYRR 1266
>gi|431917785|gb|ELK17027.1| Ubiquitin carboxyl-terminal hydrolase 11 [Pteropus alecto]
Length = 881
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFL EL F PL + + + +A+ +
Sbjct: 256 GLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQA 315
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P+ F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 316 WSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 375
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 376 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 434
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 435 PVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 468
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + K P L IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 729 ATKKLDLWKLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNE---S 783
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 784 APELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVTE 832
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 833 NQIESKAAYVLFYQR 847
>gi|426257121|ref|XP_004022183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 1 [Ovis
aries]
Length = 756
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFL EL F PL + + + +A+ +
Sbjct: 103 GLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLVKQA 162
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P+ F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 163 WSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 222
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 223 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 281
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 282 PVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 315
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P D
Sbjct: 604 ATKKLDLWMLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNDSA-- 659
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 660 -RELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDSSVSPVTE 707
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 708 NQIESKAAYVLFYQR 722
>gi|57529246|ref|NP_006668.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 4 [Homo sapiens]
gi|152031724|sp|O94966.2|UBP19_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; AltName: Full=Ubiquitin
thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19; AltName:
Full=Zinc finger MYND domain-containing protein 9
gi|148921559|gb|AAI46753.1| Ubiquitin specific peptidase 19 [Homo sapiens]
gi|168269530|dbj|BAG09892.1| ubiquitin carboxyl-terminal hydrolase 19 [synthetic construct]
Length = 1318
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 557
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 558 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 613
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 614 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 672
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 673 PVPLPQKQ 680
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1085 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1143
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1144 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1199
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1200 QVVTRYAYVLFYRR 1213
>gi|410263406|gb|JAA19669.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296342|gb|JAA26771.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1386
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 603 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 662
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 663 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 718
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 719 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 777
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 778 PVPLPQKQ 785
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1190 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1248
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1249 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1304
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1305 QVVTRYAYVLFYRR 1318
>gi|324504579|gb|ADY41976.1| Ubiquitin carboxyl-terminal hydrolase 4 [Ascaris suum]
Length = 847
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA--------ELTFGPLTIALKKLFAETK 280
V GL NLGNTCF NS +Q L + +L +YFLN E G + L + +A+
Sbjct: 253 VCGLENLGNTCFMNSALQCLSNVRELTEYFLNGCYKHDINEENVLG-MHGQLARAYADLM 311
Query: 281 PE--TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL------CSEELAFR 332
+ G + PR + QF GY QHDS ELL LLDGL +++
Sbjct: 312 EQLWNGSNRSMAPRKLKAVLGQYVQQFSGYSQHDSQELLSFLLDGLHEDLNRVKKKVYLE 371
Query: 333 KRNSPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
++S + + + + V VDY+ GQ+ STV C +C S ++PF LS
Sbjct: 372 AKDSGGRPDSVVAAEAWQMYKMGNDSVIVDYL-HGQLKSTVVCPQCKFVSVKFDPFCFLS 430
Query: 384 LPVPTKKAPSK 394
LP+P K+ K
Sbjct: 431 LPLPPKERIHK 441
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTD 967
K + ATK++ + K PP+L IHLKRF R K++ V F ++L +
Sbjct: 706 KEHQHATKKLDLWKLPPVLIIHLKRF-HFTRWSREKIDIPVEFPLTGLDLTSRVVDEKFG 764
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL- 1026
YD L+ V H G + GGHY A+ R G WY +D V +
Sbjct: 765 KAVYD--LIAVSNHAGGLGGGHYWAWARNGDD-------------WYDFNDASVSAMPQP 809
Query: 1027 -EEVLRCEAYILFYEK 1041
+ ++ EAY+LFY K
Sbjct: 810 NDPIVSKEAYVLFYRK 825
>gi|395856539|ref|XP_003800685.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Otolemur
garnettii]
Length = 1504
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 721 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 780
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 781 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 836
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 837 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 895
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 896 PVPLPQKQ 903
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1308 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1366
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1367 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1422
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1423 QVVTRYAYVLFYRR 1436
>gi|149018525|gb|EDL77166.1| rCG25629, isoform CRA_a [Rattus norvegicus]
Length = 1322
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 539 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 598
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 599 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 654
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 655 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 713
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 714 PVPLPQKQ 721
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1126 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1184
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R P ++ +++ VG W D V V
Sbjct: 1185 EQLPSYDLYAVINHYGGMIGGHYTACAR-LPSDR-SSQRSDVG--WRLFDDSTVTTVDES 1240
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1241 QVVTRYAYVLFYRR 1254
>gi|297285805|ref|XP_002802845.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like, partial
[Macaca mulatta]
Length = 1394
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 688 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 747
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 748 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 803
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 804 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 862
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 863 PVPLPQKQ 870
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1198 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1256
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1257 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1312
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1313 QVVTRYAYVLFYRR 1326
>gi|426340520|ref|XP_004034177.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 4
[Gorilla gorilla gorilla]
Length = 1318
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 557
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 558 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 613
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 614 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 672
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 673 PVPLPQKQ 680
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1085 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1143
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1144 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1199
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1200 QVVTRYAYVLFYRR 1213
>gi|431913411|gb|ELK15086.1| Ubiquitin carboxyl-terminal hydrolase 19 [Pteropus alecto]
Length = 1394
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 542 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 601
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 602 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 657
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 658 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 716
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 717 PVPLPQKQ 724
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1130 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1188
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1189 EQLPSYDLYAVISHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1244
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1245 QVVTRYAYVLFYRR 1258
>gi|397495158|ref|XP_003818427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Pan
paniscus]
Length = 1318
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 557
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 558 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 613
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 614 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 672
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 673 PVPLPQKQ 680
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1085 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1143
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1144 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1199
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1200 QVVTRYAYVLFYRR 1213
>gi|119585359|gb|EAW64955.1| ubiquitin specific peptidase 19, isoform CRA_a [Homo sapiens]
gi|119585360|gb|EAW64956.1| ubiquitin specific peptidase 19, isoform CRA_a [Homo sapiens]
Length = 1318
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 557
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 558 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 613
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 614 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 672
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 673 PVPLPQKQ 680
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1085 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1143
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1144 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1199
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1200 QVVTRYAYVLFYRR 1213
>gi|332817143|ref|XP_001160324.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Pan
troglodytes]
Length = 1318
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 557
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 558 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 613
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 614 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 672
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 673 PVPLPQKQ 680
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1085 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1143
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1144 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1199
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1200 QVVTRYAYVLFYRR 1213
>gi|291393657|ref|XP_002713460.1| PREDICTED: ubiquitin thioesterase 19 isoform 1 [Oryctolagus
cuniculus]
Length = 1322
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 539 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 598
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 599 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 654
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 655 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 713
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 714 PVPLPQKQ 721
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1126 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1184
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1185 EQLPNYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1240
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1241 QVVTRYAYVLFYRR 1254
>gi|38148678|gb|AAH60613.1| Ubiquitin specific peptidase 19 [Mus musculus]
Length = 1360
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 540 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 599
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 600 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 655
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 656 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 714
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 715 PVPLPQKQ 722
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1127 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1185
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1186 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1241
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1242 QVVTRYAYVLFYRR 1255
>gi|393906038|gb|EJD74155.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 1029
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 31/190 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTIA--LKKLFAETKPET 283
GL N+GNTCF NS +Q L+ +LQ YF PL L ++FAE +
Sbjct: 330 GLRNIGNTCFMNSSLQMLVNCKELQIYFSGGYYKKDINVMNPLGFGGRLAEVFAEFMKQM 389
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G+ P + KA QF + QHD+HE L +LDGL E+L R R P+ N
Sbjct: 390 WNGMNRAYEPTKIKELVAEKATQFANFAQHDAHEFLSFVLDGL-HEDLN-RVRVKPT-TN 446
Query: 342 GISSNQGP------------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
I + P +FVD +F GQ+ S ++C +C S ++PF L+
Sbjct: 447 TIEAEGRPDIEVSREAWHNHLLRNDSIFVD-LFHGQLKSRLQCPKCNQISITFDPFAYLA 505
Query: 384 LPVPTKKAPS 393
+P P +K S
Sbjct: 506 VPFPKEKRSS 515
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 888 LVAGNCESEESKVEE-INSKIVKVKRDATKRVLINKAPPILTIHLKRF----SQDARGRL 942
++A E+E K EE K +ATK++++ + PPIL I LKRF S R
Sbjct: 859 MLAMFSETERLKPEESWYCSRCKEHVEATKQLILYRLPPILIIQLKRFIYTTSLMTIHRR 918
Query: 943 SKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK 1001
SK + V + + ++L ++ Y L GVV H G+ GHY++ R
Sbjct: 919 SKDDRPVRYPLDNLDLAQFLSDTAPSGQETKYDLTGVVCHSGSSYFGHYISLARLL---S 975
Query: 1002 VKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
+ K + W + D V V +AY+LFY++
Sbjct: 976 IDGKTTEID--WRNFDDSIVTRAQHSRVQNDDAYLLFYKQ 1013
>gi|426249944|ref|XP_004018706.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Ovis aries]
Length = 1269
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 488 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 547
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 548 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 603
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 604 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 662
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 663 PVPLPQKQ 670
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1081 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCI-GQKE 1139
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVA 992
Y L V+ H G M GGHY A
Sbjct: 1140 EQLPSYDLYAVINHYGGMIGGHYTA 1164
>gi|48040522|ref|NP_001001516.1| ubiquitin carboxyl-terminal hydrolase 19 [Rattus norvegicus]
gi|81863791|sp|Q6J1Y9.1|UBP19_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; AltName: Full=Ubiquitin
thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|47525210|gb|AAT35219.1| ubiquitin specific protease 19 [Rattus norvegicus]
Length = 1357
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 537 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 596
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 597 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 652
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 653 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 711
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 712 PVPLPQKQ 719
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1124 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1182
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R P ++ +++ VG W D V V
Sbjct: 1183 EQLPSYDLYAVINHYGGMIGGHYTACAR-LPSDR-SSQRSDVG--WRLFDDSTVTTVDES 1238
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1239 QVVTRYAYVLFYRR 1252
>gi|354500243|ref|XP_003512210.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Cricetulus griseus]
Length = 1300
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 517 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 576
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 577 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 632
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 633 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 691
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 692 PVPLPQKQ 699
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1104 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1162
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1163 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1218
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1219 QVVTRYAYVLFYRR 1232
>gi|149018526|gb|EDL77167.1| rCG25629, isoform CRA_b [Rattus norvegicus]
Length = 1359
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 539 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 598
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 599 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 654
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 655 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 713
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 714 PVPLPQKQ 721
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1126 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1184
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R P ++ +++ VG W D V V
Sbjct: 1185 EQLPSYDLYAVINHYGGMIGGHYTACAR-LPSDR-SSQRSDVG--WRLFDDSTVTTVDES 1240
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1241 QVVTRYAYVLFYRR 1254
>gi|52078392|gb|AAH82241.1| USP19 protein, partial [Homo sapiens]
Length = 1179
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 396 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 455
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 456 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 511
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 512 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 570
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 571 PVPLPQKQ 578
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 983 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1041
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1042 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1097
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1098 QVVTRYAYVLFYRR 1111
>gi|124506253|ref|XP_001351724.1| ubiquitin carboxyl-terminal hydrolase 2, putative [Plasmodium
falciparum 3D7]
gi|23504653|emb|CAD51531.1| ubiquitin carboxyl-terminal hydrolase 2, putative [Plasmodium
falciparum 3D7]
Length = 1332
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIA--------LKKLFAETKP 281
RGL NLGNTCF NS +Q L + + +YFLN + + + L K + ET
Sbjct: 312 RGLINLGNTCFLNSSLQCLSKILKFSNYFLNGSF-WNHINYSNPVGQHGRLAKAYYETLT 370
Query: 282 ETGLRNVIN----PRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
E N + P+ I K +F GYQQHDS ELL LLDGL + RK+
Sbjct: 371 EMWKINKRDCPYAPKVLKEAISEKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIRKKPYY 430
Query: 338 SEG-----------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
E N + VD +F GQ S ++C +C S ++PF+
Sbjct: 431 EEKLQGGVDKLDVDVAEASWNRHKEINNSIIVD-LFQGQYRSRLQCPKCKKVSITFDPFM 489
Query: 381 DLSLPVPTKK 390
LS+P+P KK
Sbjct: 490 YLSIPLPPKK 499
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 90/194 (46%), Gaps = 30/194 (15%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIV---KVKRDATKRVL 919
E S+D T + E+ Y D+ L SEE ++E N+ K+ A K++
Sbjct: 1124 EEELSLDIKTLTFVDLEEKYGIDTCLKLF---SEEEHLDENNTWYCSNCKLHVQAYKKLD 1180
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNF----SEIINLRPYMDPGCTDH-----DN 970
+ + P IL +HLKRF+ R +K++ +V + E +N+ PY+ H
Sbjct: 1181 LFRMPIILILHLKRFNNTNRWLRTKIDSYVYYPHKDKEYLNMAPYILQDGLKHMTKLNPK 1240
Query: 971 YD--YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
Y Y L+GV H G++ GGHY AYV+ + WY+ +D V + E
Sbjct: 1241 YAPLYELIGVNCHTGSLCGGHYFAYVK-------------LNDQWYNFNDSCVSTIDEAE 1287
Query: 1029 VLRCEAYILFYEKI 1042
V AY+LFY+ I
Sbjct: 1288 VNTKNAYLLFYQLI 1301
>gi|354500245|ref|XP_003512211.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Cricetulus griseus]
Length = 1323
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 540 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 599
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 600 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 655
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 656 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 714
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 715 PVPLPQKQ 722
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1127 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1185
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1186 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1241
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1242 QVVTRYAYVLFYRR 1255
>gi|270265841|ref|NP_082080.3| ubiquitin carboxyl-terminal hydrolase 19 isoform 1 [Mus musculus]
gi|123791392|sp|Q3UJD6.1|UBP19_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; AltName: Full=Ubiquitin
thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|74138825|dbj|BAE27219.1| unnamed protein product [Mus musculus]
Length = 1360
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 540 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 599
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 600 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 655
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 656 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 714
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 715 PVPLPQKQ 722
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1127 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1185
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1186 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1241
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1242 QVVTRYAYVLFYRR 1255
>gi|291393659|ref|XP_002713461.1| PREDICTED: ubiquitin thioesterase 19 isoform 2 [Oryctolagus
cuniculus]
Length = 1360
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 540 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 599
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 600 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 655
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 656 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 714
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 715 PVPLPQKQ 722
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1127 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1185
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1186 EQLPNYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1241
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1242 QVVTRYAYVLFYRR 1255
>gi|196009203|ref|XP_002114467.1| hypothetical protein TRIADDRAFT_58322 [Trichoplax adhaerens]
gi|190583486|gb|EDV23557.1| hypothetical protein TRIADDRAFT_58322 [Trichoplax adhaerens]
Length = 1517
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 91/186 (48%), Gaps = 31/186 (16%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-NAEL----TFGPLTIA--LKKLFAETKP 281
V GL+N+GNTCF NS +Q + L YF+ A L PL + + K + E
Sbjct: 701 VTGLSNMGNTCFMNSALQCVSNTQALTKYFVKQAHLHEINRVNPLGMKGIIAKRYGELIQ 760
Query: 282 E--TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
E +G P IC AP+F G+QQ DS ELL LLDGL E+L R + P
Sbjct: 761 ELWSGNTRSFVPLKMRLTICKYAPRFNGFQQQDSQELLSFLLDGL-HEDLN-RVHDKPYV 818
Query: 338 ----SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
S+G N I N+ + VD +F GQ+ S V C C H+S ++PF
Sbjct: 819 ELKDSDGRSDEEVALEAWENHIKRNKS-IVVD-LFHGQLRSAVACKTCDHASVTFDPFTF 876
Query: 382 LSLPVP 387
LSLP+P
Sbjct: 877 LSLPLP 882
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L + H G + GGHYV++ + P NK WY +D +E + E V
Sbjct: 1423 YNLYAIASHSGILGGGHYVSFAK-NPNNK-----------WYIFNDSSCKETTPERVSEE 1470
Query: 1033 EAYILFYEK 1041
Y+LFYE+
Sbjct: 1471 SPYLLFYER 1479
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 885 DSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSK 944
D L A E E + E K R ATK++ I K PPIL +H+KRF Q GR K
Sbjct: 1208 DKCLRAFTSEEELGEDESWYCSKCKQHRVATKKLEIWKLPPILIVHMKRF-QFVAGRWIK 1266
Query: 945 LNGHVNFSEIINLRPY 960
+V F ++N+ PY
Sbjct: 1267 SQKNVKFP-LMNMDPY 1281
>gi|449501186|ref|XP_004161301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
sativus]
Length = 949
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 106/214 (49%), Gaps = 38/214 (17%)
Query: 205 VNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL---NA 261
V + +++G+ + + GL NLGNTCF NS +Q L+ +L DYFL
Sbjct: 324 VKFHLTESDRMIAGNSFGVASSMGLTGLQNLGNTCFMNSALQCLVHTPKLVDYFLGNFQK 383
Query: 262 ELTF-------GPLTIA----LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQ 310
E+ + G L +A L+KL+A G ++V PR F + + APQF GY Q
Sbjct: 384 EINYDNPLGMKGELALAFGDLLRKLWA-----PGSKSV-PPRMFKLKLANFAPQFSGYNQ 437
Query: 311 HDSHELLRCLLDGL--------C-----SEELAFRKRNSPSE---GNGISSNQGPVFVDY 354
HDS E L LLDGL C ++++ R+ +E N ++ N + VD
Sbjct: 438 HDSQEFLSFLLDGLHEDLNRVKCKPYFEAKDVEGRRDEEVAEEYWQNHLARNDS-IIVD- 495
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ GQ ST+ C C S ++PF+ LSLP+P+
Sbjct: 496 LCQGQYRSTLVCPACNKLSVTFDPFMYLSLPLPS 529
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + A K++ + + P IL IHLKRFS +R +KL V+F + ++L Y+
Sbjct: 827 KKPQQARKKLDLWRLPEILVIHLKRFSY-SRFFKNKLETFVDFPIDDLDLSNYI-AYQNS 884
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
H + Y L V H G M GHY AYV G G WY D V VS +
Sbjct: 885 HLSNRYMLYAVSNHYGGMGAGHYTAYVLHG-------------GKWYDFDDDRVIPVSED 931
Query: 1028 EVLRCEAYILFYEKI 1042
V AY+LFY++I
Sbjct: 932 VVKSSAAYVLFYKRI 946
>gi|332817141|ref|XP_003309901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pan
troglodytes]
Length = 1419
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 599 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 658
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 659 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 714
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 715 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 773
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 774 PVPLPQKQ 781
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1186 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1244
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1245 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1300
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1301 QVVTRYAYVLFYRR 1314
>gi|440893719|gb|ELR46389.1| Ubiquitin carboxyl-terminal hydrolase 19 [Bos grunniens mutus]
Length = 1419
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 595 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 654
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 655 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 710
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 711 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 769
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 770 PVPLPQKQ 777
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1182 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCI-GQKE 1240
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVK----AKKESVGGVWYHASDVYVRE 1023
Y L V+ H G M GGHY A R P N + + + +VG W D V
Sbjct: 1241 EQLPSYDLYAVINHYGGMIGGHYTASAR--PPNHRRPCSHSPRFAVG--WRLFDDSTVTT 1296
Query: 1024 VSLEEVLRCEAYILFYEK 1041
V +V+ AY+LFY +
Sbjct: 1297 VDESQVVTRYAYVLFYRR 1314
>gi|410225090|gb|JAA09764.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410351347|gb|JAA42277.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1421
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 601 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 660
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 661 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 716
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 717 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 775
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 776 PVPLPQKQ 783
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1188 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1246
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1247 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1302
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1303 QVVTRYAYVLFYRR 1316
>gi|148689347|gb|EDL21294.1| ubiquitin specific peptidase 19, isoform CRA_b [Mus musculus]
Length = 1361
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 541 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 600
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 601 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 656
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 657 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 715
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 716 PVPLPQKQ 723
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1128 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1186
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1187 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1242
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1243 QVVTRYAYVLFYRR 1256
>gi|296235613|ref|XP_002762974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
[Callithrix jacchus]
Length = 603
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 125/309 (40%), Gaps = 34/309 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ RHA +H L + + + +CF C + + E+
Sbjct: 249 CLSCVFFGC-------FTEKHIHRHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 300
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYV- 228
K+ ++++ + ST++S + E K + + V
Sbjct: 301 A--KETKEKILRFLTSTSTDVSHQQFMTSGIEDKQAICETKEQEPKLVKPKKKRRKKSVY 358
Query: 229 ---VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
+RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 359 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 418
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 419 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 468
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKT 396
G +N +D +F G + S V C C ST +P D+SL +P A
Sbjct: 469 SGGQETNNPNCCNCIIDQIFTGGLQSDVTCQTCHSVSTTIDPCWDISLDLPGSCATFDSQ 528
Query: 397 QPASRAKKT 405
P RA T
Sbjct: 529 NP-ERADST 536
>gi|50304791|ref|XP_452351.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641484|emb|CAH01202.1| KLLA0C03476p [Kluyveromyces lactis]
Length = 1252
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 91/211 (43%), Gaps = 45/211 (21%)
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL------------------NAELTF 265
NA + GL+NLGNTC+ NS +Q LL + +L +YFL + F
Sbjct: 333 NAPSGIMGLSNLGNTCYMNSALQCLLHIPELNEYFLYKGYEREININNPLGHKGDVAHAF 392
Query: 266 GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL- 324
G L L LFA P G PR+F I F GY Q DS E L LLDGL
Sbjct: 393 GHL---LYSLFA---PSYGQSTFYAPRNFKNTIGHYNSLFAGYGQQDSQEFLAFLLDGLH 446
Query: 325 -----CSEELAFRKRNSPSEGNGISSNQGPVFV----DYV-----------FGGQIASTV 364
E+ K P++G ++Q + DY+ F G ST+
Sbjct: 447 EDLNRVIEKPYVNKPEFPNDGQIDDTDQIVLLAANMWDYIKKRNDSVIMDLFVGLYKSTL 506
Query: 365 RCVECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
C C H S ++P+ DL+LP+P + S K
Sbjct: 507 VCPNCNHVSITFDPYNDLTLPLPIENYWSTK 537
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K A+K++ + P IL IHLKRF ++ R K++ V F E +++ PY+ +
Sbjct: 929 KQHTQASKQIELWNTPDILLIHLKRF-ENQRSFSDKIDATVKFPIEGLDMSPYLSYK-KE 986
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+N Y L+ V H G + GGHY AY R + G WY+ D V EVS E
Sbjct: 987 GENDVYDLIAVDNHYGGLGGGHYTAYCRNF-----------IDGKWYYFDDSRVNEVSPE 1035
Query: 1028 EVLRCEAYILFYEK 1041
+ AY+LFY +
Sbjct: 1036 NSIAGSAYLLFYRR 1049
>gi|410263402|gb|JAA19667.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296338|gb|JAA26769.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1421
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 601 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 660
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 661 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 716
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 717 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 775
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 776 PVPLPQKQ 783
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1188 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1246
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1247 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1302
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1303 QVVTRYAYVLFYRR 1316
>gi|348560267|ref|XP_003465935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cavia
porcellus]
Length = 525
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 122/301 (40%), Gaps = 41/301 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 76 CLYCVFFGC-------FTKKHIHEHAKAKRHNLAIDLTYGGI-YCFLCQDYIYDKDMEII 127
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ I + + E +I S T+ +
Sbjct: 128 AKEEQQKASKMQGIGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 175
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFL----NAELTFGP---LTIALKKLFAETKPE 282
RGL NLGNTCF N ++Q L L+D+FL + E+ P L + LF E
Sbjct: 176 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHHCEMQ-SPSSCLVCEMSSLFQEFY-- 232
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSE 339
+G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNH 292
Query: 340 GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPA 399
N I +D +F G + S V C C ST +PF D+SL +P P P
Sbjct: 293 CNCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPG 344
Query: 400 S 400
S
Sbjct: 345 S 345
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 497 AIITKASIKDVLDSEGYLLFYHK 519
>gi|118082513|ref|XP_416154.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Gallus gallus]
Length = 714
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 26/158 (16%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
C+ +K + +SK V + +A K++++ + P +L +HLKRF R K+ HVNF
Sbjct: 540 CDQCNTKRRKFSSKPV-ILTEAQKQLMVCRLPQVLRLHLKRFRWSGRNHREKIGVHVNFD 598
Query: 953 EIINLRPY--------MDPGCTDHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVK 1003
+I+N+ PY + P C + Y L VV H G G GHY AY
Sbjct: 599 QILNMEPYCCRESLKSLLPDC-----FIYDLSAVVMHHGKGFGSGHYTAYCYN------- 646
Query: 1004 AKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
S GG W H +D + ++EEV + +AYILFY +
Sbjct: 647 ----SEGGFWVHCNDSKLNMCTMEEVCKAQAYILFYSQ 680
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+G +++P + + P F+GY Q D+ E L LLD + +EL P+
Sbjct: 396 SGKWALVSPFAMLHSVWRLIPAFRGYAQQDAQEFLCELLDKV-QQELETTGTRYPAL--- 451
Query: 343 ISSNQGPVF------VDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
I + Q + V+ +F GQ+ S V C+ C + S EPF DLSL P +
Sbjct: 452 IPAAQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIEPFWDLSLEFPER 504
>gi|449548362|gb|EMD39329.1| hypothetical protein CERSUDRAFT_64183 [Ceriporiopsis subvermispora B]
Length = 1166
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 87/193 (45%), Gaps = 30/193 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-----NAELTFGPLTI--ALKKLFAETKPET 283
GL NLGNTC+ NS +Q L A +F NA PL AL FA E
Sbjct: 809 GLKNLGNTCYMNSTIQCLSATVPFTRFFTEGRWKNAVNMVNPLGTKGALAHAFASILREM 868
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
G + P +F +C+ APQF G +QHDS E L LLDGL + + + P+
Sbjct: 869 WQGENQCLTPVTFRRSVCTYAPQFSGSEQHDSQEFLTSLLDGLHEDLNRVLHKPHTEPTP 928
Query: 340 GNGISSNQGPV------------------FVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
+ PV VD+ F GQ + + C+ C +ST Y F+
Sbjct: 929 EQEAELERLPVQIASEREWQIYRMRNDSLVVDF-FQGQFRNRLECLTCHKTSTTYNAFMY 987
Query: 382 LSLPVPTKKAPSK 394
L+LP+P+ ++ SK
Sbjct: 988 LTLPIPSTRSGSK 1000
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 73/154 (47%), Gaps = 39/154 (25%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLS-KLNGHVNFS-EIINLRPYM----- 961
K R ATKR+ +++ PP+L IHLKRFS A+G + K+ V+F ++L YM
Sbjct: 1028 KTLRKATKRLSLSRLPPVLLIHLKRFS--AKGPFTDKVETVVDFPLRGLDLTNYMPPPLP 1085
Query: 962 ------------DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYV--RGGPKNKVKAKKE 1007
DP C Y Y L V H GT+ GGHY A++ RGG
Sbjct: 1086 PGVGGGPSISRDDPRC-QMPPYRYDLYAVTNHFGTLSGGHYTAFISSRGG---------- 1134
Query: 1008 SVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
W + D V + ++V+ AYILFY++
Sbjct: 1135 -----WLYCDDSRVSQADAKDVVGRPAYILFYKR 1163
>gi|148230765|ref|NP_001085912.1| ubiquitin carboxyl-terminal hydrolase 22-A [Xenopus laevis]
gi|82184225|sp|Q6GNI6.1|UB22A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-A; AltName:
Full=Deubiquitinating enzyme 22-A; AltName:
Full=Ubiquitin thioesterase 22-A; AltName:
Full=Ubiquitin-specific-processing protease 22-A
gi|49115779|gb|AAH73524.1| MGC82781 protein [Xenopus laevis]
Length = 523
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 135/336 (40%), Gaps = 35/336 (10%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G+ L + CL C + C + H+ HA+ R
Sbjct: 32 GTPETRKRKAKSCICHMCGAHL---NRLHSCLYCVFFGC-------FTKKHIHEHAKNKR 81
Query: 140 HPLVIQWENPHLRWCFPCNTLIP---VEKTEENGENKDALSEVVKLIKGRSTEISSVDVE 196
H L I + +CF C I +E+ + + K +V + + V
Sbjct: 82 HNLAIDLLYGGI-YCFMCQDYIYDKDMEQVAKEEQRKAWKLQVFSPALVSPYQYTMTGVG 140
Query: 197 DAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQD 256
+ + E++ + N +RGL NLGNTCF N ++Q L L+D
Sbjct: 141 EKYSTWEPTKRELELLQHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRD 200
Query: 257 YFLN----AELTFGP---LTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
+FL+ E+ P L + LF E +G R+ P + + A GY+
Sbjct: 201 FFLSDRHKCEMQ-SPNSCLVCEMSTLFQEF--YSGHRSPHIPYRLLHLVWTHARHLAGYE 257
Query: 310 QHDSHELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRC 366
Q D+HE L LD L C + +K N+P+ N I +D +F G + S V C
Sbjct: 258 QQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCI--------IDQIFTGGLQSDVTC 309
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRA 402
C ST +PF D+SL +P P P S A
Sbjct: 310 QVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDA 345
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 388 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 446
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + H++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 447 QYQQPSDSLHNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 494
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 495 AIITKASIKDVLDSEGYLLFYHK 517
>gi|297812317|ref|XP_002874042.1| ubiquitin carboxyl-terminal hydrolase 8 [Arabidopsis lyrata subsp.
lyrata]
gi|297319879|gb|EFH50301.1| ubiquitin carboxyl-terminal hydrolase 8 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 48/194 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-----------------NAELTFGPLTIA 271
+ GL NLGNTCF NS +Q L +L D+FL L FG L
Sbjct: 298 LTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDL--- 354
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+ L+A + + PR+F + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 355 LRSLWAPGS------STVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN- 406
Query: 332 RKRNSP----SEGNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R RN P +G+G ++ N + VD + GQ ST+ C C S
Sbjct: 407 RVRNKPYVEAKDGDGRPDAEVADEYWRNHVARNDS-IIVD-LCQGQYKSTLVCPICKKVS 464
Query: 374 TVYEPFLDLSLPVP 387
+++PF+ LSLP+P
Sbjct: 465 VMFDPFMYLSLPLP 478
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + + P IL IHLKRFS +R +KL +V+F + ++L Y+
Sbjct: 769 KEHRQAIKKLDLWRLPEILVIHLKRFSY-SRFMKNKLEAYVDFPLDDLDLSSYISYK-NG 826
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y Y L + H G+M GGHY AYV G G WY D +V +S E
Sbjct: 827 QTTYRYMLYAISNHYGSMGGGHYTAYVHHG------------GDRWYDFDDSHVHPISQE 874
Query: 1028 EVLRCEAYILFYEKI 1042
++ AY+LFY+++
Sbjct: 875 KIKTSAAYVLFYKRL 889
>gi|195078736|ref|XP_001997241.1| GH17697 [Drosophila grimshawi]
gi|193906143|gb|EDW05010.1| GH17697 [Drosophila grimshawi]
Length = 1065
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 85/187 (45%), Gaps = 33/187 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF--------LNAEL---TFGPLTIALKKLFAET 279
GL NLGNTCF N+ +Q L L YF LNA T G L + +L E
Sbjct: 38 GLHNLGNTCFMNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYSELLKEV 97
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
T + P C+ APQF G QHDS ELL LLD L E+L SE
Sbjct: 98 W--TATTRSVAPLKLRFCVNKHAPQFSGGGQHDSQELLEWLLDAL-HEDLNRVMEKPYSE 154
Query: 340 ---GNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
NG + NQ + +D +F GQ+ S V C+ CGH S ++PF L
Sbjct: 155 LKDSNGRPDKIVAAEAWSQHHARNQS-IIID-LFYGQLKSKVSCLSCGHESVRFDPFSLL 212
Query: 383 SLPVPTK 389
SLP+P +
Sbjct: 213 SLPLPVE 219
Score = 46.6 bits (109), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query: 969 DNYD--YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
D +D Y+L VV H G + GGHY++Y + G WY +D RE+S
Sbjct: 962 DEFDPRYKLYAVVSHSGMLNGGHYISYA------------ANTTGSWYCYNDSSCREISQ 1009
Query: 1027 E-EVLRCEAYILFYEK 1041
+ + AY+LFYE+
Sbjct: 1010 KPNIDPSAAYLLFYER 1025
>gi|170046356|ref|XP_001850734.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869155|gb|EDS32538.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 638
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 48/208 (23%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYF--------------------LNAELTFGPL 268
V GL NLGNTCF NSV+Q+L + + YF + L +
Sbjct: 245 VVGLRNLGNTCFMNSVLQSLSNIQEFSCYFNAMPSLETGKHKQKAYHSRSMKENLDDVFV 304
Query: 269 TIALKK-LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE 327
L+K L ++ G + I+P F I PQF+G++QHD+HE LR +LD L +E
Sbjct: 305 VEELRKVLLNLSQGGDGSKGAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTE 364
Query: 328 --ELAF------------------------RKRNSPSEGNGISSNQGPVFVDYVFGGQIA 361
+++F N P+ + + + + V VFGG +
Sbjct: 365 LQQVSFPVDGSGSGLAGGGGGGHKPGEGKPNPYNVPALSHLHTKGRNSI-VTNVFGGILQ 423
Query: 362 STVRCVECGHSSTVYEPFLDLSLPVPTK 389
S VRC+ CG S ++PFLDLSL +P K
Sbjct: 424 SEVRCLICGMESKKHDPFLDLSLDIPEK 451
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 29/164 (17%)
Query: 892 NCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+C S ++VEE+ + K K+ +TKR I + P +L +H+KRF + R +K+
Sbjct: 476 DCLSSFTEVEELAETELYYCNSCKCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYR-TKI 534
Query: 946 NGHVNF--------SEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGG 997
+ ++F ++N P + + YD V +V H GHY ++
Sbjct: 535 DLRISFPINALDMSQFVLNNGPETRRSNSSCNVYDLAAV-IVHHGNGSSCGHYTSFAINN 593
Query: 998 PKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
GVW H +D V+EVS V C+ YILFY K
Sbjct: 594 -------------GVWMHFNDHTVKEVSSAAVADCKPYILFYIK 624
>gi|224059196|ref|XP_002299762.1| predicted protein [Populus trichocarpa]
gi|222847020|gb|EEE84567.1| predicted protein [Populus trichocarpa]
Length = 624
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 106/221 (47%), Gaps = 48/221 (21%)
Query: 203 GNVNSEI-KSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-- 259
GN ++ I +S S+ G + + + GL NLGNTCF NS +Q L +L DYFL
Sbjct: 1 GNTSTSIFRSNSSAFFGRSGEAGSLGLT-GLQNLGNTCFMNSAIQCLAHTPKLVDYFLGD 59
Query: 260 -------------NAE--LTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQ 304
N E L FG L L++L+A + PR+F + APQ
Sbjct: 60 YGREVNHKNPLGMNGEIALAFGDL---LRRLWAPGA------TPVAPRTFKSKLARFAPQ 110
Query: 305 FKGYQQHDSHELLRCLLDGLCSEEL----------AFRKRNSPSE-------GNGISSNQ 347
F G+ QHDS ELL LLDGL E+L A + + P E N ++ N
Sbjct: 111 FSGFNQHDSQELLAFLLDGL-HEDLNRVKSKPYVEAKDEESRPDEEVADEYWQNHVARND 169
Query: 348 GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
V VD V GQ ST+ C +C S ++PF+ LSLP+P+
Sbjct: 170 S-VIVD-VCQGQYKSTLVCPDCRKVSVTFDPFMYLSLPLPS 208
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 853 CSQESITDQDEGSC--SVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIV-- 908
C E +T Q + S S+ SG+ A++ +S S NC K E + + +
Sbjct: 442 CWPEKLTKQYDTSLLSSLPEIFKSGFFAKRPQESVSLY---NCLEAFLKEEPLGPEDMWY 498
Query: 909 ----KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPG 964
K R A+K++ + + P IL IHLKRFS + +KL +V+F P D
Sbjct: 499 CPSCKQHRQASKKLDLWRLPEILVIHLKRFSYTHSAK-NKLETYVDF-------PVDDLD 550
Query: 965 CTDHDNYD-------YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHAS 1017
+ H +Y Y L + H G+M GGHY A++ G G WY
Sbjct: 551 LSTHLSYKNGQLSHRYMLYAISNHYGSMGGGHYTAFIHYG------------GDQWYDFD 598
Query: 1018 DVYVREVSLEEVLRCEAYILFYEKI 1042
D +V +S E++ AY+LFY ++
Sbjct: 599 DSHVSPISQEKIKTSAAYVLFYRRV 623
>gi|255549649|ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 889
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 92/195 (47%), Gaps = 48/195 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN-----------------AELTFGPLTIA 271
+ GL NLGNTCF NS +Q L +L DYFL L FG L
Sbjct: 288 LTGLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYGREINHDNPLGMDGEIALAFGDL--- 344
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+KL+A + PR+F + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 345 LRKLWAPGATP------VAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN- 396
Query: 332 RKRNSP------SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R ++ P EG N ++ N + VD + GQ ST+ C C S
Sbjct: 397 RVKSKPYVEAKDGEGRLDEEVADEYWQNHVARNDS-IIVD-ICQGQYKSTLVCPICKKVS 454
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 455 VTFDPFMYLSLPLPS 469
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 19/137 (13%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDP--GC 965
K R A+K++ + + P IL IHLKRFS R +KL +V+F + ++L Y+ G
Sbjct: 766 KKHRQASKKLDLWRLPEILVIHLKRFSY-TRFMKNKLEAYVDFPVDDLDLSAYISYKNGQ 824
Query: 966 TDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
H Y L + H G+M GGHY A+V G G WY D V +S
Sbjct: 825 LSHR---YMLYAISNHYGSMGGGHYTAFVHHG------------AGRWYDFDDSLVHPIS 869
Query: 1026 LEEVLRCEAYILFYEKI 1042
+++ AY+LFY ++
Sbjct: 870 QDKIKTSAAYVLFYRRV 886
>gi|354500241|ref|XP_003512209.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Cricetulus griseus]
Length = 1361
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 541 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 600
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 601 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 656
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 657 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 715
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 716 PVPLPQKQ 723
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1128 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1186
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1187 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1242
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1243 QVVTRYAYVLFYRR 1256
>gi|355727895|gb|AES09346.1| ubiquitin specific peptidase 11 [Mustela putorius furo]
Length = 747
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFL EL F PL + + + +A+ +
Sbjct: 207 GLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQA 266
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 267 WSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 326
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 327 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 385
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 386 PVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 419
>gi|326911682|ref|XP_003202185.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like [Meleagris
gallopavo]
Length = 714
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 26/158 (16%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
C+ +K + +SK V + +A K++++ + P +L +HLKRF R K+ HVNF
Sbjct: 540 CDQCNTKRRKFSSKPV-ILTEAQKQLMVCRLPQVLRLHLKRFRWSGRNHREKIGVHVNFD 598
Query: 953 EIINLRPY--------MDPGCTDHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVK 1003
+I+N+ PY + P C + Y L VV H G G GHY AY
Sbjct: 599 QILNMEPYCCRESLKSLLPDC-----FIYDLSAVVMHHGKGFGSGHYTAYCYN------- 646
Query: 1004 AKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
S GG W H +D + ++EEV + +AYILFY +
Sbjct: 647 ----SEGGFWVHCNDSKLNMCTMEEVCKAQAYILFYSQ 680
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+G +++P + + P F+GY Q D+ E L LLD + +EL P+
Sbjct: 396 SGKWALVSPFAMLHSVWRLIPAFRGYAQQDAQEFLCELLDKV-QQELETTGTRYPAL--- 451
Query: 343 ISSNQGPVF------VDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
I + Q + V+ +F GQ+ S V C+ C + S EPF DLSL P +
Sbjct: 452 IPAAQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIEPFWDLSLEFPER 504
>gi|308081762|ref|NP_001183969.1| ubiquitin carboxyl-terminal hydrolase 11 [Canis lupus familiaris]
Length = 770
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + QL +YFL EL F PL +K AE +
Sbjct: 103 GLTNLGNTCFMNSALQCLSNVPQLTEYFLKNHYLEELNFCNPL--GMKGEIAEAYADLVK 160
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---- 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 161 QAWSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVEL 220
Query: 336 -----SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
P + + Q V VD F G ST+ C +CG+ S ++PF LS+
Sbjct: 221 CDAAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 279
Query: 385 PVPTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P+P + P + ++ +L K G+I
Sbjct: 280 PLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 315
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P +
Sbjct: 618 ATKKLDLWMLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNESAP- 674
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 675 --ELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVTE 721
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 722 NQIESKAAYVLFYQR 736
>gi|403331641|gb|EJY64779.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1514
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 88/191 (46%), Gaps = 30/191 (15%)
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIA--------LKKLFAE 278
Y GL NLGNTC+ NS +Q L +YF+ + + I L FA+
Sbjct: 628 YRTVGLYNLGNTCYMNSALQCLANTKFFYEYFIQEKRYMKQMNIKNKLGHQGELASNFAQ 687
Query: 279 TKPETGLR--NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS 336
+ L V+ P+ F G I + + QF GY Q DS E L LLDGL EEL R
Sbjct: 688 LMQKMYLEGGRVVIPKEFKGAIATISEQFAGYDQQDSQEFLFFLLDGL-HEELNLR-LEK 745
Query: 337 PSEGNGISSNQGPV----------------FVDYVFGGQIASTVRCVECGHSSTVYEPF- 379
P N S ++ V F+ ++F GQ+ ST+ C +C ST ++ F
Sbjct: 746 PYAENPNSDDRKIVELGLEQWSNTLRRDWSFIFFLFYGQLKSTLNCQKCNKISTTFDIFT 805
Query: 380 -LDLSLPVPTK 389
+ LSLP P+K
Sbjct: 806 NIPLSLPEPSK 816
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 28/168 (16%)
Query: 885 DSQLVAGNCESEESKVEEINSK------IVKVKRDATKRVLINKAPPILTIHLKRFSQDA 938
+ Q+ +C + +VEEI+ K K + K++ I + PPIL + LKRF +
Sbjct: 1209 EDQVNLEDCLRKFHEVEEISEKDNIYCSTCKEPQSHLKKLEIFRPPPILIVQLKRFKFNN 1268
Query: 939 RGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-------YRLVGVVEHLGTMRGGHYV 991
+ R +KLN V F + NL + TD D + Y L ++ H G + GHY+
Sbjct: 1269 QSR-NKLNTLVEFP-LYNLD--VSTFVTDVDFLNNSDIEQKYDLYAMINHYGNLSFGHYI 1324
Query: 992 AYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
+ V+ G WY D + E++ + AYILFY
Sbjct: 1325 SIVKNFQ-----------DGKWYKYDDSARIPIPEEQIQKDFAYILFY 1361
>gi|257050978|sp|Q9C585.2|UBP8_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; Short=AtUBP8; AltName:
Full=Ubiquitin thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
Length = 871
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 48/194 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-----------------NAELTFGPLTIA 271
+ GL NLGNTCF NS +Q L +L D+FL L FG L
Sbjct: 278 LTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDL--- 334
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+ L+A + + PR+F + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 335 LRSLWAPGA------STVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN- 386
Query: 332 RKRNSP----SEGNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R +N P +G+G ++ N + VD V GQ ST+ C C S
Sbjct: 387 RVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDS-IIVD-VCQGQYKSTLVCPICKKVS 444
Query: 374 TVYEPFLDLSLPVP 387
+++PF+ LSLP+P
Sbjct: 445 VMFDPFMYLSLPLP 458
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + + P IL IHLKRFS +R +KL +V+F + ++L Y+
Sbjct: 749 KEHRQAIKKLDLWRLPEILVIHLKRFSY-SRFMKNKLEAYVDFPLDNLDLSSYISYK-NG 806
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y Y L + H G+M GGHY AYV G G WY D +V ++S E
Sbjct: 807 QTTYRYMLYAISNHYGSMGGGHYTAYVHHG------------GDRWYDFDDSHVHQISQE 854
Query: 1028 EVLRCEAYILFYEKI 1042
++ AY+LFY+++
Sbjct: 855 KIKTSAAYVLFYKRL 869
>gi|344275832|ref|XP_003409715.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Loxodonta
africana]
Length = 1321
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 538 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 597
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 598 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 653
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 654 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCTKVSITFDPFLYL 712
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 713 PVPLPQKQ 720
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1125 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1183
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1184 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1239
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1240 QVVTRYAYVLFYRR 1253
>gi|357152240|ref|XP_003576054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like
[Brachypodium distachyon]
Length = 930
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 89/184 (48%), Gaps = 34/184 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF---LNAELTF-------GPLTIALKKLFAETK 280
GL NLGNTCF NS +Q L+ + YF + E+ + G L +A +L K
Sbjct: 333 GLLNLGNTCFMNSAVQCLVHTPEFARYFREDYHCEINWNNPLGMVGELALAFGELL--RK 390
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP--- 337
+ R ++PR F + APQF GY QHDS ELL LLDGL E+L R ++ P
Sbjct: 391 LWSPSRTPVSPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGL-HEDLN-RVKHRPYLK 448
Query: 338 ---------------SEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
N I+ N + VD V GQ ST+ C CG S ++PF+ L
Sbjct: 449 SNDADGRSDEEVADEYWANHIARNDS-IIVD-VCQGQYKSTLVCPICGKVSVTFDPFMYL 506
Query: 383 SLPV 386
SLP+
Sbjct: 507 SLPL 510
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDH 968
K +R A+K++ + + P +L IHLKRFS +R KL VNF P D T++
Sbjct: 785 KEQRQASKKLDLWRLPEVLVIHLKRFSF-SRSTKHKLETFVNF-------PIHDLDLTNY 836
Query: 969 -------DNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
Y L V H G+M GHY A ++ +N+ WY+ D +V
Sbjct: 837 IANKKISQRQIYELYAVSNHYGSMASGHYTANIKLLDENR-----------WYNFDDSHV 885
Query: 1022 REVSLEEVLRCEAYILFYEKI 1042
++ E+V AY+LFY ++
Sbjct: 886 SAINEEDVKSGAAYVLFYRRV 906
>gi|426238935|ref|XP_004013392.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Ovis aries]
Length = 606
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 122/302 (40%), Gaps = 39/302 (12%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I+ + +CF C I + E
Sbjct: 157 CLHCVFFGC-------FTKKHIHEHAKSKRHNLAIELMYGGI-YCFLCQDYIYDKDIEII 208
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 209 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 256
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 257 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 314
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 315 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 374
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 375 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 426
Query: 401 RA 402
+
Sbjct: 427 ES 428
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 471 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 529
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R + K + W+ D
Sbjct: 530 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIR-------QHKDQ-----WFKCDD 577
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+ +VL E Y+LFY K
Sbjct: 578 AIITKASIADVLDSEGYLLFYHK 600
>gi|242005524|ref|XP_002423614.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212506774|gb|EEB10876.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 477
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 125/298 (41%), Gaps = 57/298 (19%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPV 163
S + VCL C + C G H+ HA+ H L + + H+ +CF C I
Sbjct: 53 SPRLHVCLSCIFFGCYDTG-------HIQDHAKNESHLLALDVNHGHI-FCFECGDYIYS 104
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLD- 222
S V+KL + + W S + S +S ++ DL
Sbjct: 105 -------------SIVLKL---------TATINQNWLKSLEMPSIYRSWEPSMAERDLMI 142
Query: 223 ---------GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTFGP-- 267
N +RGL NLGNTCF N ++Q L+ L++YFL +L P
Sbjct: 143 KNPKRKRILENTTIGLRGLINLGNTCFMNCIVQALMHTPLLRNYFLADHHVCQLADQPGN 202
Query: 268 -LTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCS 326
L L +L+ E +G +N + I ++A GY+Q D+HE LD L
Sbjct: 203 CLVCELSRLYQEF--YSGKKNPLTLHKLLHLIWNQARHLAGYEQQDAHEFFIATLDVLHR 260
Query: 327 EELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
A +K ++P++ + I +D +F G + S V C C + ST +PF D+SL
Sbjct: 261 HCEATQKSSNPAKCSCI--------IDQIFTGGLQSDVVCQSCNNVSTTIDPFWDISL 310
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 37/204 (18%)
Query: 842 MQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVE 901
+QS C SC+ S T S+D S G S + LV +C ++ E
Sbjct: 286 LQSDVVC--QSCNNVSTTIDPFWDISLDLGQSVGLSGSE----PKSLV--DCLERFTRAE 337
Query: 902 EINSKIVKVK-------RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI 954
+ S K+K +++TK++ + K P + + HLKRF R K++ ++F E
Sbjct: 338 HLGST-AKIKCNNCKNYQESTKQLTMKKLPVVASFHLKRFEHSTRLH-KKISTFISFPEH 395
Query: 955 INLRPYMDPGCTDHDN--------YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKK 1006
+++ P+M N Y Y L V+ H+G++ GHY A+VR +
Sbjct: 396 LDMTPFMSHQRNLGGNGNLNNPSAYMYSLFAVINHVGSLDAGHYTAFVRQQKNH------ 449
Query: 1007 ESVGGVWYHASDVYVREVSLEEVL 1030
W+ D + +L +VL
Sbjct: 450 ------WFKCDDHLITRANLNDVL 467
>gi|156380826|ref|XP_001631968.1| predicted protein [Nematostella vectensis]
gi|156219017|gb|EDO39905.1| predicted protein [Nematostella vectensis]
Length = 1526
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 92/185 (49%), Gaps = 33/185 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT----IALKKLFAETKPE---- 282
GL+NLGNTCF NS +Q L+ +Q F A+ + L + +K A +
Sbjct: 657 GLSNLGNTCFMNSALQ-CLSNTQPLTQFFTAKCHYYELNRTNPLGMKGHIARRYGDLVED 715
Query: 283 --TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP--- 337
+G + P I AP+F G+QQHD+ E L LLDGL E+L R + P
Sbjct: 716 LWSGSSRSLAPLKLRWTIGRYAPRFNGFQQHDAQEFLSFLLDGL-HEDLN-RVHDKPYVE 773
Query: 338 ---SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
S+G N I NQ + VD +F GQ+ S VRCVECG+ S ++PF L
Sbjct: 774 LKDSDGRLDEIVAQEAWDNHIKRNQS-IIVD-LFQGQLKSQVRCVECGYVSARFDPFTFL 831
Query: 383 SLPVP 387
SLP+P
Sbjct: 832 SLPLP 836
>gi|113675400|ref|NP_001038713.1| ubiquitin carboxyl-terminal hydrolase 22 [Danio rerio]
gi|94573470|gb|AAI16509.1| Ubiquitin specific peptidase 22 [Danio rerio]
Length = 417
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 135/329 (41%), Gaps = 41/329 (12%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G+ L + CL C + C + H+ HA+ R
Sbjct: 32 GSAETRKRKAKSCICHMCGAHL---NRLHSCLHCVFFGC-------FSKKHIHEHAKNKR 81
Query: 140 HPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAW 199
H L I + + +CF C I + E+ + + + ++ I + + E
Sbjct: 82 HNLAIDLLHGGI-YCFVCQDYIYDKDMEQIAKEEQRKAWKLQGIGEKYSMWEPTKRELEL 140
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
+I + T+ +RGL NLGNTCF N ++Q L L+D+FL
Sbjct: 141 LRHNPKRRKITANCTIG------------LRGLINLGNTCFMNCIVQALTHTPLLRDFFL 188
Query: 260 N----AEL-TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSH 314
+ E+ + L + +LF E +G R+ P + + A GY+Q D+H
Sbjct: 189 SDRHKCEMQSNSCLVCEMSQLFQEF--YSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAH 246
Query: 315 ELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGH 371
E L LD L C + +K N+P+ N I +D +F G + S V C C
Sbjct: 247 EFLIAALDVLHRHCKGDDNGKKANNPNHCNCI--------IDQIFTGGLQSDVTCQVCHG 298
Query: 372 SSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
ST +PF D+SL +P P P S
Sbjct: 299 VSTTIDPFWDISLDLPGSSTPFWPLSPGS 327
>gi|156546432|ref|XP_001607172.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Nasonia
vitripennis]
Length = 917
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 47/218 (21%)
Query: 863 EGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINK 922
+G CSV + ++ ++ ++++ C E+K ++ K+V D+TK+ LI++
Sbjct: 708 DGECSVQ-VYLNQFTERELMSGNNKVGCTACTERENKGKKEGVKMVCT--DSTKQYLISR 764
Query: 923 APPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD-YRLVGVVEH 981
P +L +HLKRF Q + K+ HV+F +++L P D+ Y L GVVEH
Sbjct: 765 VPAVLILHLKRF-QVQKFSFRKVGKHVSFPMLLDLAPV----SKDYTKRRIYALYGVVEH 819
Query: 982 LGTMRGGHYVAYVR-------GGPK------------------------------NKVKA 1004
GT+ GGHY+AYV+ P+ NK
Sbjct: 820 SGTLYGGHYIAYVKSRAPLKPNDPRWSFLPTRDSFENKESSSESNSELESDETSENKT-P 878
Query: 1005 KKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+ E G WY+ SD V EV + VL EAY+LFYE+I
Sbjct: 879 QVEPPPGRWYYVSDSRVHEVDEKTVLGSEAYLLFYERI 916
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 140/339 (41%), Gaps = 74/339 (21%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPV 163
+W+CL CGH ACG +SH + H R H +V+ + + WC+ C+ +
Sbjct: 82 LWICLQCGHVACG-----RDKKSHAIEHHETPRNGVHCVVMDTQRWSV-WCYKCDDTV-- 133
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
+ ++K L E+ L+K + + + + N S + +E +
Sbjct: 134 --NNSSPKHKRKLDEITDLLKKWANKPAPTQPKPHITMCQNETSTMDNEKKKIL------ 185
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLL-------AMSQLQDYFLNAELTFGPLTIA----- 271
N V GL NLGNTCFFN+V+Q L + LQ+ L G L +A
Sbjct: 186 NNLPKVGGLVNLGNTCFFNAVLQCLAQTPYLIKVLDDLQEPGQKFVLPGGKLKVADEEEI 245
Query: 272 ------------------LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS 313
L+K ++ + G V P + K QHDS
Sbjct: 246 ELPPIEGVLEESGNFTPVLRKTLSDMQNSDG--QVYKPAELLNSLRKKTMACTDGGQHDS 303
Query: 314 HELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVD-------------------- 353
HELLR LL+ + +E++ R + E G+S P VD
Sbjct: 304 HELLRHLLELVRNEDVR-RYQKVILEEVGLSGKTKPQCVDENLKSRVKFYGNQANAKLLG 362
Query: 354 --YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
VF G++ ST+ C+EC HSS EPFLDLSLP+ +K
Sbjct: 363 PERVFRGELVSTLNCLECHHSSIRTEPFLDLSLPILIEK 401
>gi|444725487|gb|ELW66051.1| Ubiquitin carboxyl-terminal hydrolase 49 [Tupaia chinensis]
Length = 459
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 65/305 (21%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPV 163
++++W CL C H ACG + H ++H T HPL ++ + ++ +C+ C +
Sbjct: 32 TESVWACLKCSHVACG-----RYIEDHALKHFEDTGHPLAMEVRDLYV-FCYLCKDYVLN 85
Query: 164 EKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDG 223
+ E + +KL+ RS+ ++ + + V G
Sbjct: 86 DNPEGD----------LKLL--RSSLLAP-----------------RRQPAVAPG----- 111
Query: 224 NACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-FGPLTIAL--------KK 274
V GL NLGNTC+ NS++Q L + + ++ FLN + + G L++ L K
Sbjct: 112 -----VTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSKTGHLSLELIQNKEPSSKH 166
Query: 275 LFAETKPETGLR-------NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE 327
+ + T R +++P + + S P F+GY Q D+ E L LL + E
Sbjct: 167 ISLCHELHTLFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLHKVQQE 226
Query: 328 ---ELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
E A R+ P ++ V V+ +F GQ+ S V CV C + S EPF DLSL
Sbjct: 227 LESEGAARRILIPFSQRKLTKQVLKV-VNTIFHGQLLSQVTCVSCNYKSNTIEPFWDLSL 285
Query: 385 PVPTK 389
P +
Sbjct: 286 EFPER 290
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
C+ SK + N K + V +A K+++I + P +L +HLKRF R K+ HV F
Sbjct: 328 CDQCNSKRRKSNPKPL-VLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVVFD 386
Query: 953 EIINLRPYM---DPGCTDHDNYDYRLVGVVEHLGTMRG-GHYVAY---VRGGPKNKVKAK 1005
+++ + PY D + + Y L VV H G G GHY AY GGP K
Sbjct: 387 QVLTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGPVIKRPVP 446
Query: 1006 KESVGGVWY 1014
+ V G W+
Sbjct: 447 EPFVVG-WH 454
>gi|391340120|ref|XP_003744393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Metaseiulus
occidentalis]
Length = 465
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 27/144 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------D 962
+++TK++ K P +++ HLKRF + ++ K++ + F + ++L PYM D
Sbjct: 327 QESTKQLTFKKLPLVVSFHLKRF-EHSKLLHKKVSTPIAFPQQLDLSPYMAKPEEQEEAD 385
Query: 963 PGCTDHDN-----YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHAS 1017
P T HD + Y L GVV H GT++ GHY AY+R P W+
Sbjct: 386 PTSTSHDPSFSRPHTYSLFGVVIHQGTLQTGHYTAYIRQSPNG------------WFKCD 433
Query: 1018 DVYVREVSLEEVLRCEAYILFYEK 1041
D ++ ++EEVL CEAY+LFY K
Sbjct: 434 DCEIKTATIEEVLNCEAYLLFYHK 457
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAETKPE 282
+RGL NLGNTCF N ++Q L L++YFL+ + + P L + +F E
Sbjct: 128 LRGLYNLGNTCFMNCIIQCLTHTPFLREYFLSQQHKCIRSSPADCLVCEMCSIFQEFYSG 187
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+V P + + A GY+Q D+HE L+ + + + G
Sbjct: 188 KIFPHV--PTRLLYLVWTHAQHLAGYEQQDAHEFFMATLNLV----------HKHASGTD 235
Query: 343 ISSNQGP-VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKA-PSKKTQPAS 400
I + G +D +F G + S V C C ST EPF D+SL + + A S+K +
Sbjct: 236 IPYSGGCNCIIDVIFTGSLQSDVVCQSCHGVSTTIEPFWDISLDLGQQTAGDSRKPRSLD 295
Query: 401 RAKKT 405
R K T
Sbjct: 296 RKKLT 300
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT----------FGPLTIALKKLFAETK 280
GL NLGNTCF NS++Q L L +Y L T G L A L
Sbjct: 2 GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIW 61
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPS 338
+ I+P++F I AP+F GY Q DS E L LL GL + + R R+ +
Sbjct: 62 RSSNGEYAISPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINRITSRPRHVTT 121
Query: 339 E-GNGISSNQ--GPVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
E + +S +Q + Y+ F GQ+ ST++C CGH S ++PF DLSLP
Sbjct: 122 EIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVGQLKSTLKCSVCGHKSVTFDPFWDLSLP 181
Query: 386 VP 387
+P
Sbjct: 182 IP 183
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 874 SGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKR 933
S ++ E+V D + NC K ++ TK I++ P IL +HLKR
Sbjct: 196 SLFTKEEVLDGDEKPTCSNC---------------KTRQRCTKSFTIHRCPKILVLHLKR 240
Query: 934 FSQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVA 992
FS R R +KLN V F ++L PYM ++ Y L V H G+ GHY A
Sbjct: 241 FSPGERFR-AKLNTRVEFPLTNLDLCPYM----SNSHYVMYNLYAVSNHSGSTYSGHYTA 295
Query: 993 YVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYE 1040
PK+ G W+ +D V EVS V EAY+LFYE
Sbjct: 296 TCLH-PKS----------GEWHECNDTKVTEVSSSRVASSEAYVLFYE 332
>gi|312077696|ref|XP_003141417.1| hypothetical protein LOAG_05832 [Loa loa]
Length = 967
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 31/190 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----TFGPLTIA--LKKLFAETKPET 283
GL N+GNTCF NS +Q L+ +LQ YF PL L ++FAE +
Sbjct: 268 GLRNIGNTCFMNSSLQMLVNCKELQIYFSGGYYKKDINVMNPLGFGGRLAEVFAEFMKQM 327
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G+ P + KA QF + QHD+HE L +LDGL E+L R R P+ N
Sbjct: 328 WNGMNRAYEPTKIKELVAEKATQFANFAQHDAHEFLSFVLDGL-HEDLN-RVRVKPTT-N 384
Query: 342 GISSNQGP------------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
I + P +FVD +F GQ+ S ++C +C S ++PF L+
Sbjct: 385 TIEAEGRPDIEVSREAWHNHLLRNDSIFVD-LFHGQLKSRLQCPKCNQISITFDPFAYLA 443
Query: 384 LPVPTKKAPS 393
+P P +K S
Sbjct: 444 VPFPKEKRSS 453
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 888 LVAGNCESEESKVEE-INSKIVKVKRDATKRVLINKAPPILTIHLKRF----SQDARGRL 942
++A E+E K EE K +ATK++++ + PPIL I LKRF S R
Sbjct: 797 MLAMFSETERLKPEESWYCSRCKEHVEATKQLILYRLPPILIIQLKRFIYTTSLMTIHRR 856
Query: 943 SKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNK 1001
SK + V + + ++L ++ Y L GVV H G+ GHY++ R
Sbjct: 857 SKDDRPVRYPLDNLDLAQFLSDTAPSGQETKYDLTGVVCHSGSSYFGHYISLARLL---S 913
Query: 1002 VKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
+ K + W + D V V +AY+LFY++
Sbjct: 914 IDGKTTEID--WRNFDDSIVTRAQHSRVQNDDAYLLFYKQ 951
>gi|405121660|gb|AFR96428.1| ubiquitin carboxyl-terminal hydrolase 12 [Cryptococcus neoformans
var. grubii H99]
Length = 1418
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 112/261 (42%), Gaps = 52/261 (19%)
Query: 178 EVVKLIKGRSTEISSVDVED------------------AWF-GSGNVNSEIKSESTVV-S 217
E K+ +G ST + +VDV + A+F GSG SE S + V +
Sbjct: 375 EFGKIPEGSSTPVWNVDVNNDKQAIEKSDKPAPLFSKPAFFSGSGKAASESASSTDAVQT 434
Query: 218 GSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----FGPLTI-- 270
S + GL NLGNTCF NS +Q L +L YFL+ T PL +
Sbjct: 435 RSQTRERKGKGLVGLQNLGNTCFMNSAVQCLSNTKELSQYFLSGVYTDELNRDNPLGMQG 494
Query: 271 ALKKLFAET-----KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC 325
+ + F + P + + + +PR APQF GY QHD+ E + LLDGL
Sbjct: 495 QIAEAFGQVVENLWAPSSSMHSSYSPRQLKWTTSRFAPQFAGYGQHDTQEFIAFLLDGLH 554
Query: 326 SEELAFRKRN-------SPSEGN------------GISSNQGPVFVDYVFGGQIASTVRC 366
+ K+ P GN G V VD +F GQ+ ST+ C
Sbjct: 555 EDLNRILKKPYIEKPDWKPGGGNKELAELGKECWDGYKKRNDSVIVD-LFQGQLKSTLVC 613
Query: 367 VECGHSSTVYEPFLDLSLPVP 387
EC S ++PF+ L++P+P
Sbjct: 614 PECHKESITFDPFMYLTVPLP 634
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 37/175 (21%)
Query: 892 NCESEESKVEEINS------KIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+C E SK E + + K + ATK++ I KAP IL I +KRF +R KL
Sbjct: 1069 DCLDEFSKEETLGQDDLWYCPVCKKHQAATKKLEIYKAPDILVICIKRFGS-SRRMGDKL 1127
Query: 946 NGHVNF-------SEIINLRPYMDPGCTDHDNYD------------YRLVGVVEHLGTMR 986
+ V+F + I R + + ++ + Y L V H G M
Sbjct: 1128 DNLVHFPIDGLDLEDRIGERQVVKTLKLNGEDVEAYGIEDDGEPLLYDLYAVDNHFGGMG 1187
Query: 987 GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
GGHY A+ R N+ WY+ D V + + V AY+LFY +
Sbjct: 1188 GGHYTAFCRNQVDNQ-----------WYNYDDSRVSKADVSSVQSRAAYLLFYRR 1231
>gi|344254380|gb|EGW10484.1| Ubiquitin carboxyl-terminal hydrolase 19 [Cricetulus griseus]
Length = 1357
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 574 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 633
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 634 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 689
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 690 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 748
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 749 PVPLPQKQ 756
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1161 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1219
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1220 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1275
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1276 QVVTRYAYVLFYRR 1289
>gi|301787135|ref|XP_002928982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Ailuropoda melanoleuca]
Length = 523
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I+ + +CF C I + E
Sbjct: 74 CLHCVFFGC-------FTKKHIHEHAKSKRHRLAIELMYGGI-YCFLCQDYIYDKDMEII 125
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 126 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 173
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 174 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 231
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 232 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 291
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 292 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 343
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPG------- 964
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 388 QESTKQLTMKKVPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 446
Query: 965 ----CTDHDNYD--YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
TD N D Y L VV H GT+ GHY +++R W+ D
Sbjct: 447 QYQQLTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 494
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+E+VL E Y+LFY K
Sbjct: 495 AIITKASIEDVLDSEGYLLFYHK 517
>gi|18405549|ref|NP_565944.1| ubiquitin carboxyl-terminal hydrolase 5 [Arabidopsis thaliana]
gi|62901125|sp|O22207.2|UBP5_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 5; AltName:
Full=Deubiquitinating enzyme 5; Short=AtUBP5; AltName:
Full=Ubiquitin thioesterase 5; AltName:
Full=Ubiquitin-specific-processing protease 5
gi|6648604|gb|AAF21246.1|AF048705_1 ubiquitin-specific protease [Arabidopsis thaliana]
gi|20196935|gb|AAB86453.2| ubiquitin-specific protease 5 (UBP5), putative [Arabidopsis
thaliana]
gi|20466470|gb|AAM20552.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|23198184|gb|AAN15619.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|330254806|gb|AEC09900.1| ubiquitin carboxyl-terminal hydrolase 5 [Arabidopsis thaliana]
Length = 924
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 93/190 (48%), Gaps = 42/190 (22%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYF---LNAELTF-------GPLTIA----LKK 274
+ GL NLGNTCF NS +Q L+ + YF + E+ + G L +A L+K
Sbjct: 316 LTGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGELALAFGDLLRK 375
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
L+A R I PR F + APQF GY QHDS ELL LLDGL E+L R +
Sbjct: 376 LWAPG------RTPIAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN-RVK 427
Query: 335 NSP------SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVY 376
+ P ++G N I+ N + VD V GQ ST+ C C S +
Sbjct: 428 HKPYINSRDADGRPDEEVADEFWKNHIARNDS-IIVD-VCQGQYKSTLVCPICNKVSVTF 485
Query: 377 EPFLDLSLPV 386
+PF+ LSLP+
Sbjct: 486 DPFMYLSLPL 495
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHD 969
+R A+K++ + + P +L IHLKRFS +R KL VNF ++L Y+
Sbjct: 797 RRQASKKLDLWRLPEVLVIHLKRFSY-SRSMKHKLETFVNFPIHDLDLTKYVANKNLSQP 855
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
Y L + H G M GHY A+++ ++ WY+ D ++ ++ ++V
Sbjct: 856 QL-YELYALTNHYGGMGSGHYTAHIKLLDDSR-----------WYNFDDSHISHINEDDV 903
Query: 1030 LRCEAYILFYEK 1041
AY+LFY +
Sbjct: 904 KSGAAYVLFYRR 915
>gi|281211003|gb|EFA85169.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 1138
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 82/185 (44%), Gaps = 29/185 (15%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----------FGPLTIALKKLFA 277
V GL NLGNTCF NS +Q L L Y LN + G L I KL
Sbjct: 453 VTGLDNLGNTCFMNSSLQCLSNTVPLTRYLLNDKHNQDLNRDNPLGCHGDLAIEYAKLIK 512
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR--- 334
+ G PR I APQF+GY QHDS ELL LLDGL + +K+
Sbjct: 513 QL--WRGDITSTGPRELKSQIERFAPQFQGYHQHDSQELLAFLLDGLHEDLNKVKKKPFI 570
Query: 335 ------NSPSE------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
N P E + + V VD+ F Q+ S + C CG S ++PF+ L
Sbjct: 571 EGKDYDNRPDEVIAKEQWDMHKARNDSVIVDW-FQSQLKSRLVCPVCGKISITFDPFMYL 629
Query: 383 SLPVP 387
SLP+P
Sbjct: 630 SLPLP 634
>gi|229558006|sp|A6H8I0.1|UBP22_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|148921505|gb|AAI46619.1| Usp22 protein [Danio rerio]
Length = 506
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 135/329 (41%), Gaps = 42/329 (12%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G+ L + CL C + C + H+ HA+ R
Sbjct: 32 GSAETRKRKAKSCICHMCGAHL---NRLHSCLHCVFFGCFS-------KKHIHEHAKNKR 81
Query: 140 HPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAW 199
H L I + +CF C I + E+ + + + ++ I + + E
Sbjct: 82 HNLAIDLLYGGI-YCFVCQDYIYDKDMEQIAKEEQRKAWKLQGIGEKYSMWEPTKRELEL 140
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
+I + T+ +RGL NLGNTCF N ++Q L L+D+FL
Sbjct: 141 LRHNPKRRKITANCTIG------------LRGLINLGNTCFMNCIVQALTHTPLLRDFFL 188
Query: 260 N----AEL-TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSH 314
+ E+ + L + +LF E +G R+ P + + A GY+Q D+H
Sbjct: 189 SDRHKCEMQSNSCLVCEMSQLFQEF--YSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAH 246
Query: 315 ELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGH 371
E L LD L C ++ +K N+P+ N I +D +F G + S V C C
Sbjct: 247 EFLIAALDVLHRHCKDDNG-KKANNPNHCNCI--------IDQIFTGGLQSDVTCQVCHG 297
Query: 372 SSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
ST +PF D+SL +P P P S
Sbjct: 298 VSTTIDPFWDISLDLPGSSTPFWPLSPGS 326
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + + P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 371 QESTKQLTMKRLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 429
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY ++R W+ D
Sbjct: 430 QYQQPVDSLNNDNKYSLFAVVNHQGTLESGHYTTFIRQHKDQ------------WFKCDD 477
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 478 AIITKASIKDVLDSEGYLLFYHK 500
>gi|348532251|ref|XP_003453620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Oreochromis
niloticus]
Length = 1585
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 93/184 (50%), Gaps = 31/184 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q + L DYFL+ + + P+ + + K + + E
Sbjct: 736 GLSNLGNTCFMNSSIQCVSNTKPLTDYFLSGKHLYELNRTNPIGMRGHMAKCYGDLVMEL 795
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + + P I AP+F G+QQ DS ELL LLDGL E+L R P
Sbjct: 796 WSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGL-HEDLN-RVHEKPYVEL 853
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
S+G N + N+ + VD +F GQ+ S V+C CGH S ++PF LS
Sbjct: 854 KDSDGRPDWEVASEAWENHLRRNRS-IVVD-LFHGQLKSQVKCKTCGHISARFDPFNFLS 911
Query: 384 LPVP 387
LP+P
Sbjct: 912 LPLP 915
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 839 AVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEES 898
AV+ + LR SQE I ++ CSV+ + + AE + DS L A E E
Sbjct: 1188 AVDWDPTALHLRYQTSQERIVEE---HCSVEQSRRA--QAEPI-SLDSCLKAFTSEEELG 1241
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF 951
+ E K R ATK++ + + PPIL +HLKRF Q GR K V F
Sbjct: 1242 EDELYYCSKCKTHRLATKKLDLWRLPPILIVHLKRF-QFVNGRWIKSQKIVKF 1293
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L + H G + GGHYV Y + + G WY +D +EV EE+
Sbjct: 1491 YNLYAISCHSGILGGGHYVTYAK------------NPNGKWYCYNDSSCKEVHSEEIDTD 1538
Query: 1033 EAYILFYEK 1041
AYILFYE+
Sbjct: 1539 SAYILFYEQ 1547
>gi|13374862|emb|CAC34496.1| ubiquitin-specific protease-like protein [Arabidopsis thaliana]
Length = 901
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 48/194 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-----------------NAELTFGPLTIA 271
+ GL NLGNTCF NS +Q L +L D+FL L FG L
Sbjct: 308 LTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDL--- 364
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+ L+A + + PR+F + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 365 LRSLWAPGA------STVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN- 416
Query: 332 RKRNSP----SEGNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R +N P +G+G ++ N + VD V GQ ST+ C C S
Sbjct: 417 RVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDS-IIVD-VCQGQYKSTLVCPICKKVS 474
Query: 374 TVYEPFLDLSLPVP 387
+++PF+ LSLP+P
Sbjct: 475 VMFDPFMYLSLPLP 488
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + + P IL IHLKRFS +R +KL +V+F + ++L Y+
Sbjct: 779 KEHRQAIKKLDLWRLPEILVIHLKRFSY-SRFMKNKLEAYVDFPLDNLDLSSYISYK-NG 836
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y Y L + H G+M GGHY AYV G G WY D +V ++S E
Sbjct: 837 QTTYRYMLYAISNHYGSMGGGHYTAYVHHG------------GDRWYDFDDSHVHQISQE 884
Query: 1028 EVLRCEAYILFYEKI 1042
++ AY+LFY+++
Sbjct: 885 KIKTSAAYVLFYKRL 899
>gi|255578843|ref|XP_002530276.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223530208|gb|EEF32116.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 942
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 89/189 (47%), Gaps = 40/189 (21%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYF---LNAELTF-------GPLTIA----LKK 274
+ GL NLGNTCF NS +Q L+ + YF + E+ + G L IA L+K
Sbjct: 320 LTGLQNLGNTCFMNSAIQCLVHTPEFVKYFREDYHQEINWQNPLGMVGELAIAFGELLRK 379
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
L+A R + PR F + APQF GY QHDS ELL LLDGL E+L K
Sbjct: 380 LWAPG------RAPVPPRQFKAKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNRVKH 432
Query: 335 N----------SPSE-------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYE 377
P E N I+ N + VD V GQ ST+ C C S ++
Sbjct: 433 KPYIKSKDADGRPDEEVADEYWANHIARNDS-IIVD-VCQGQYKSTLVCPVCNKVSVTFD 490
Query: 378 PFLDLSLPV 386
PF+ LSLP+
Sbjct: 491 PFMYLSLPL 499
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K +R A+K++ + + P +L IHLKRFS +R KL VNF ++L Y+ +
Sbjct: 800 KERRQASKKLDLWRLPEVLVIHLKRFSY-SRSMKHKLETFVNFPIHDLDLTSYVANKNSI 858
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L + H G M GHY A ++ +N+ WY+ D ++ ++ E
Sbjct: 859 RRQL-YELYALTNHYGGMGSGHYTARIKLLDENR-----------WYNFDDSHISLINEE 906
Query: 1028 EVLRCEAYILFYEKI 1042
+V AY+LFY ++
Sbjct: 907 DVKSAAAYVLFYRRV 921
>gi|443921116|gb|ELU40883.1| ubiquitin carboxyl-terminal hydrolase [Rhizoctonia solani AG-1 IA]
Length = 1005
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 93/212 (43%), Gaps = 47/212 (22%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELT-FGPL----------TIALKKL 275
GL NLGNTCF NS +Q LL + +L+ YFL AEL PL I +K++
Sbjct: 328 GLQNLGNTCFMNSGLQCLLHIPELERYFLQGHHLAELNPHNPLGMEGQMAEAFNILVKQI 387
Query: 276 F---AETKPETGL-----RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC-- 325
+ A+ P T L + P G +C AP F GYQ+ DS EL+ +LDGL
Sbjct: 388 YPAGAKPGPTTTLDPSNDYSSYVPLHLKGVVCRWAPAFSGYQECDSQELIGTMLDGLHED 447
Query: 326 ---------------------SEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTV 364
S R + +G + + D +F G ST+
Sbjct: 448 LNRILKKPYVEKPEWPEHDRESSRAELEARIAQETWDGHARRNDSIITD-LFQGMYKSTL 506
Query: 365 RCVECGHSSTVYEPFLDLSLPVPTKKAPSKKT 396
C +CG S ++PFL LSLP+P + K T
Sbjct: 507 TCPDCGKISVTFDPFLTLSLPLPASVSAWKHT 538
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 883 QSDSQ-LVAGNCESEESKVEEINSK------IVKVKRDATKRVLINKAPPILTIHLKRFS 935
QS+ Q + +C E +KVE++ K R ATK++ + P IL + LKRF+
Sbjct: 763 QSNKQEITLSDCLDELTKVEQLGVNDSWYCSRCKQHRQATKQLQLRSLPTILVLQLKRFA 822
Query: 936 QDARGRLSKLNGHVNFS-EIINLRPYM-DPGCTDHDNYDYRLVGVVEHL-GTMRGGHYVA 992
+ SK++ V F + ++L + D GCT Y L V EH M GHY
Sbjct: 823 -----KRSKIDRLVTFPLDGLDLSDRVEDEGCT------YDLFAVDEHKSNVMSSGHYTT 871
Query: 993 YVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
+AK + G WYH D V + E + AY+LFY +
Sbjct: 872 ----------RAKNQ-CDGAWYHYQDSLVTPTTPEAAINPGAYLLFYRR 909
>gi|240256325|ref|NP_568411.4| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|240256327|ref|NP_851052.4| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|332005587|gb|AED92970.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|332005588|gb|AED92971.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
Length = 913
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 48/194 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-----------------NAELTFGPLTIA 271
+ GL NLGNTCF NS +Q L +L D+FL L FG L
Sbjct: 320 LTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDL--- 376
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+ L+A + + PR+F + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 377 LRSLWAPGA------STVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN- 428
Query: 332 RKRNSP----SEGNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R +N P +G+G ++ N + VD V GQ ST+ C C S
Sbjct: 429 RVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDS-IIVD-VCQGQYKSTLVCPICKKVS 486
Query: 374 TVYEPFLDLSLPVP 387
+++PF+ LSLP+P
Sbjct: 487 VMFDPFMYLSLPLP 500
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + + P IL IHLKRFS +R +KL +V+F + ++L Y+
Sbjct: 791 KEHRQAIKKLDLWRLPEILVIHLKRFSY-SRFMKNKLEAYVDFPLDNLDLSSYISYK-NG 848
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y Y L + H G+M GGHY AYV G G WY D +V ++S E
Sbjct: 849 QTTYRYMLYAISNHYGSMGGGHYTAYVHHG------------GDRWYDFDDSHVHQISQE 896
Query: 1028 EVLRCEAYILFYEKI 1042
++ AY+LFY+++
Sbjct: 897 KIKTSAAYVLFYKRL 911
>gi|300176336|emb|CBK23647.2| unnamed protein product [Blastocystis hominis]
Length = 439
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 88/187 (47%), Gaps = 42/187 (22%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----------------NAELT--FGPLTI 270
+ GL NLGNTC+ NS +Q L + L+DYFL N EL FG L
Sbjct: 167 LTGLENLGNTCYMNSSLQCLTHTNLLRDYFLSGDYASDINPESSDGMNGELANAFGVLMS 226
Query: 271 ALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELA 330
A+ ++ +T+ VI PR F +C PQF+GY QHD+ ELL +LDGL SE+L
Sbjct: 227 AMWEM--QTR-------VIAPRRFKNELCMFQPQFQGYTQHDAQELLSVVLDGL-SEDLN 276
Query: 331 FRKRNSPSEGNGISSNQGPVFVDY--------------VFGGQIASTVRCVECGHSSTVY 376
+ E +G ++ + Y +F GQ S +C C +SS +
Sbjct: 277 LTYKKPYVELDGDYCSESELARRYWVLHCSREQSIITALFCGQFKSLAQCTACNYSSAKF 336
Query: 377 EPFLDLS 383
+PF S
Sbjct: 337 DPFTPFS 343
>gi|195020247|ref|XP_001985155.1| GH14664 [Drosophila grimshawi]
gi|193898637|gb|EDV97503.1| GH14664 [Drosophila grimshawi]
Length = 1764
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 85/187 (45%), Gaps = 33/187 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF--------LNAEL---TFGPLTIALKKLFAET 279
GL NLGNTCF N+ +Q L L YF LNA T G L + +L E
Sbjct: 738 GLHNLGNTCFMNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYSELLKEV 797
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
T + P C+ APQF G QHDS ELL LLD L E+L SE
Sbjct: 798 W--TATTRSVAPLKLRFCVNKHAPQFSGGGQHDSQELLEWLLDAL-HEDLNRVMEKPYSE 854
Query: 340 ---GNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
NG + NQ + +D +F GQ+ S V C+ CGH S ++PF L
Sbjct: 855 LKDSNGRPDKIVAAEAWSQHHARNQS-IIID-LFYGQLKSKVSCLSCGHESVRFDPFSLL 912
Query: 383 SLPVPTK 389
SLP+P +
Sbjct: 913 SLPLPVE 919
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query: 969 DNYD--YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
D +D Y+L VV H G + GGHY++Y + G WY +D RE+S
Sbjct: 1661 DEFDPRYKLYAVVSHSGMLNGGHYISYA------------ANTTGSWYCYNDSSCREISQ 1708
Query: 1027 E-EVLRCEAYILFYEK 1041
+ + AY+LFYE+
Sbjct: 1709 KPNIDPSAAYLLFYER 1724
>gi|410988678|ref|XP_004000607.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 51-like [Felis catus]
Length = 667
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + + E+
Sbjct: 205 CLSCVFFGC-------FTEKHIHKHAETKQHNLAVDLYHG-VIYCFMCKDYVYDKDIEQI 256
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE---STVVSGSDLDGNAC 226
K+ +++KL+ ST++S + + E K + + C
Sbjct: 257 A--KETKEKILKLLTSISTDVSQQQCMTSGVEEKHSTCESKEQEPKLVKPKKKRRKKSVC 314
Query: 227 YV-VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
V +RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 315 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCVMTSPSLCLVCEMSSLFHAM 374
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 375 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 424
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
G +N +D +F G + S V C C ST +P D+SL +P
Sbjct: 425 SVGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLP 475
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPG------- 964
+++TK++ + K P + HLKRF + R K+N ++F +++ P++
Sbjct: 533 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKDSRMKE 591
Query: 965 ------CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
CT ++N Y L V+ H GT+ GHY +++R W+ D
Sbjct: 592 DQPPTDCTPNEN-KYSLFAVINHHGTLESGHYTSFIRQQKDQ------------WFSCDD 638
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 639 AIITKATIEDLLYSEGYLLFYHK 661
>gi|350595653|ref|XP_003484153.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Sus scrofa]
Length = 951
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFL EL F PL + + + +A+ +
Sbjct: 298 GLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQA 357
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 358 WSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 417
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 418 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 476
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 477 PVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 510
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 799 ATKKLDLWMLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNE---S 853
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 854 APELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVTE 902
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 903 NQIESKAAYVLFYQR 917
>gi|403357049|gb|EJY78138.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 490
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 21/176 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-----NAELTFGPLTIALKKLFAETKPETGL 285
GL N+GNTCF NS++Q + A L DYFL + + L A L + K G
Sbjct: 160 GLRNIGNTCFLNSILQCIFASPYLNDYFLGQYQKGSGVGKARLADAYHSLIKQVK--QGH 217
Query: 286 RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG--- 342
I+P + APQF GY Q D+ E LR LLDGL E RK+ + E +
Sbjct: 218 ETTISPTDLKYAVSKVAPQFSGYGQQDAQEFLRFLLDGLHEELNRVRKKPAYKEMDFDKL 277
Query: 343 ISSNQGPVFVDY-----------VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ Q + Y +F GQ+ + + C CG+ S ++ F DLS+ +P
Sbjct: 278 PADQQSEKWWQYNKERDDSIITDLFTGQLMNKIECQSCGYCSNAFDNFQDLSVSIP 333
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 32/154 (20%)
Query: 900 VEEINSKIVKVKR--DATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINL 957
+E K K K+ + K + + + P I+ IHLKRF ++ R K+N + + I+L
Sbjct: 358 METCGYKCSKCKKVDNFKKEMTLYRFPKIMVIHLKRFY-NSSMRREKVNTTITIPQKIDL 416
Query: 958 RPYMDPGCTDHDNYD------YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG- 1010
Y H N++ Y+L G+ H GT+ GGHY+ E+
Sbjct: 417 SSY-----APHSNHESKKKAKYQLYGISHHSGTLYGGHYIG--------------EAFNF 457
Query: 1011 --GVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
G WY +D +V+ S ++ AY+LFY ++
Sbjct: 458 DDGKWYQCNDSWVKACS-PDLESASAYVLFYVQL 490
>gi|356550050|ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
max]
Length = 872
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 53/253 (20%)
Query: 175 ALSEVVKLIKGRSTEIS------SVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYV 228
LS+ ++ +G+ E++ S+ + D + G+ NS+ + +++ S
Sbjct: 220 GLSDSIRCREGKKDEMANFSGSASLKMNDTYDGA---NSDCMNSNSLTFSSGPGEAGSLG 276
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAE--LTFGPLTIA 271
+ GL NLGNTCF NS +Q L +L DYFL N E L FG L
Sbjct: 277 LTGLQNLGNTCFMNSSLQCLAHTPKLVDYFLEDYIREINHDNPLGMNGEIALAFGDL--- 333
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL------- 324
L+KL+A + + PR+F + APQF G+ QHDS ELL LLDGL
Sbjct: 334 LRKLWAPGA------SPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRV 387
Query: 325 -CSEELAFRK-RNSPSE-------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTV 375
C + + + P E N ++ N V VD V GQ ST+ C C S
Sbjct: 388 KCKPYIEVKDGDDRPDEEVADEYWHNHLARNDS-VIVD-VCQGQYKSTLVCPVCRKVSVT 445
Query: 376 YEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 446 FDPFMYLSLPLPS 458
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 16/134 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A+K++ + + P IL IHLKRF Q +R +KL +V+F + ++L Y+ G +
Sbjct: 748 KEHRQASKKLDLWRLPEILVIHLKRF-QYSRYLKNKLETYVDFPVDNLDLSAYITHG--N 804
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++Y+Y L V H G+M GGHY A+V G G WY D +V + E
Sbjct: 805 GESYNYTLYAVSNHYGSMGGGHYTAFVHRG------------GDQWYDFDDSHVYPIIKE 852
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY +
Sbjct: 853 KIKSSAAYVLFYRR 866
>gi|28436934|gb|AAH46824.1| Usp19 protein, partial [Mus musculus]
Length = 929
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 146 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 205
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 206 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 261
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 262 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 320
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 321 PVPLPQKQ 328
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 733 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 791
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 792 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 847
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 848 QVVTRYAYVLFYRR 861
>gi|384498157|gb|EIE88648.1| hypothetical protein RO3G_13359 [Rhizopus delemar RA 99-880]
Length = 523
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 81/193 (41%), Gaps = 37/193 (19%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL NLGNTC+ NS++Q L YF++ T G LT L
Sbjct: 171 GLKNLGNTCYMNSIIQCLSGTLPFARYFISGVFRQHVNRTNKLGTGGILTEKFADLLRAI 230
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC-------------- 325
E N ++P SF I AP+F G QHDS E L LLDG+
Sbjct: 231 WNEN--YNFVSPMSFREAIIRFAPRFSGTDQHDSQEFLTFLLDGIHEDVNLASHNHSGHL 288
Query: 326 -----SEELAFRK----RNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVY 376
EEL F K + S S + V +F GQ S + C C H+ST Y
Sbjct: 289 PTMTKQEELEFEKLPDWQASAMAWERYLSRNTSIVVS-LFQGQYRSRLTCSSCKHTSTTY 347
Query: 377 EPFLDLSLPVPTK 389
PF+ LSLP+P K
Sbjct: 348 TPFMSLSLPIPAK 360
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCT--- 966
KR ATK+++I++ P +L IHLKRFS D + +KL+ V + + ++L Y+
Sbjct: 397 KRKATKQLMISRLPDVLLIHLKRFSADGLFK-NKLDVMVKYPIKGLDLYNYVSRFIPPRP 455
Query: 967 ---------DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHAS 1017
D Y L V H G++ GGHY AYV+ G +N +W++
Sbjct: 456 PSSSTSLAQDRTLSTYDLYAVSNHYGSLSGGHYTAYVKDGHRN-----------IWHYFD 504
Query: 1018 D 1018
D
Sbjct: 505 D 505
>gi|431914524|gb|ELK15774.1| Ubiquitin carboxyl-terminal hydrolase 22 [Pteropus alecto]
Length = 525
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I+ + +CF C I + E
Sbjct: 76 CLHCVFFGC-------FTKKHIHEHAKSKRHNLAIELMYGGI-YCFLCQDYIYDKDMEII 127
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 128 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 175
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 176 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 233
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 234 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 293
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 294 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPADSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+E+VL E Y+LFY K
Sbjct: 497 AIITKASIEDVLDSEGYLLFYHK 519
>gi|340374559|ref|XP_003385805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Amphimedon
queenslandica]
Length = 588
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKP--------- 281
GL+NLGNTCF NSV+Q L L +YF+ E G KK P
Sbjct: 10 GLSNLGNTCFLNSVLQCLSNTEPLVEYFIGKE---GKAEKPYKKHINRNNPLGLGGVIAE 66
Query: 282 ---------ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR 332
TG + + PR I AP+ QQHDSH+LL LL+ L + +
Sbjct: 67 SFGALLNDMWTGQNSYLIPRRLRNVIARHAPELFDSQQHDSHKLLDFLLNKLHEDLNLIK 126
Query: 333 KR-----NSPSEG---NGISSNQGPVFVD-------YVFGGQIASTVRCVECGHSSTVYE 377
KR N +EG N I+ ++ +F GQ+ ST+ C +C S ++
Sbjct: 127 KRPCIEMNIKTEGRDDNDIARESWLCYLQCNQSVIVRLFQGQLKSTLHCPKCEKESRTFD 186
Query: 378 PFLDLSLPVPTK-----KAPSKKTQPASRAKKTKLPPKKSGRI 415
PF+ LSLP+P + K ++ P + KK L K G I
Sbjct: 187 PFMYLSLPIPVQNTRDIKVFLIRSDPLAIMKKYCLSVPKDGNI 229
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 85/180 (47%), Gaps = 26/180 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL---------NAELTFGPLTIALKKLFAETKP 281
GL NLGNTCF NS++Q L L+DY L N L KL +T
Sbjct: 63 GLRNLGNTCFMNSILQCLSNTHDLRDYCLRNTHRTDLNNNCRAKAALMDEFAKL-TQTIW 121
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE-ELAFRKRNSPSE- 339
+ I+P F I AP+F GY Q D+ E LR LLDGL +E K +P E
Sbjct: 122 TSASNEAISPSDFKMQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVKSRAPVED 181
Query: 340 -------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
N ++ VD +F GQ+ S++ C ECG STV++PF DLSLP+
Sbjct: 182 LDHLSEDEKGKRMWNKYLESEDSKVVD-LFVGQLKSSLTCSECGFCSTVFDPFWDLSLPI 240
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K +R TK+ I K P IL +HLKRFS+ R R SKL+ VNF + ++LR +
Sbjct: 274 KTRRKCTKKFTIQKFPKILVLHLKRFSE-CRVRTSKLSTFVNFPLKELDLREFASDNSV- 331
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
N Y L V H GT GGHY AY R G WY +D V +S
Sbjct: 332 --NAVYNLYAVSNHTGTSLGGHYTAYCRS-----------PCTGEWYTYNDSRVSPMSSS 378
Query: 1028 EVLRCEAYILFYE 1040
+V +AY+LFYE
Sbjct: 379 QVCSSDAYVLFYE 391
>gi|56693219|ref|NP_001008574.1| ubiquitin carboxyl-terminal hydrolase 2 [Danio rerio]
gi|56269271|gb|AAH86963.1| Zgc:92134 [Danio rerio]
Length = 391
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL---------NAELTFGPLTIALKKLFAETKP 281
GL NLGNTCF NS++Q L L+DY L N T L KL +T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNRTHTALMEEFAKLI-QTMW 117
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNS--- 336
+ ++P F I AP+F GY Q D+ E LR LLDGL +E + R R +
Sbjct: 118 TSSSSEAVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRGNTED 177
Query: 337 ----PSEGNG------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P E G + VD +F GQ+ S++ C ECG+ STV++PF DLSLP+
Sbjct: 178 FDHLPDEEKGKKMWSKYLEREDSKIVD-LFVGQLKSSLTCSECGYCSTVFDPFWDLSLPI 236
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-SEIINLRPYMDPGCTD 967
K +R TK+ + K P IL +HLKRFS+ AR R SKL+ VNF + ++LR + +
Sbjct: 270 KARRRCTKKFTVQKFPKILVLHLKRFSE-ARIRTSKLSTFVNFPMKDLDLREFASDRSSS 328
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V H GT GGHY AY P+N G WY +D V +S
Sbjct: 329 A---VYNLYAVSNHSGTTMGGHYTAYC-CNPEN----------GEWYTYNDSRVTPMSAS 374
Query: 1028 EVLRCEAYILFYEK 1041
+V +AY+LFYE+
Sbjct: 375 QVRSSDAYVLFYER 388
>gi|38197496|gb|AAH00350.4| USP11 protein, partial [Homo sapiens]
Length = 921
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 268 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 327
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 328 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 387
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 388 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 446
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 769 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 823
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 824 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 872
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 873 NQIESKAAYVLFYQR 887
>gi|410928885|ref|XP_003977830.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Takifugu
rubripes]
Length = 1556
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 91/184 (49%), Gaps = 31/184 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKPE- 282
GL+NLGNTCF NS +Q + L DYFL+ + P+ + + K + + E
Sbjct: 734 GLSNLGNTCFMNSSIQCVSNTKALTDYFLSGRHLYELNRTNPIGMRGHMAKCYGDLVMEL 793
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + + P I AP+F G+QQ DS ELL LLDGL E+L R P
Sbjct: 794 WSGTQKSVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGL-HEDLN-RVHEKPYVEL 851
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
S G N + N+ + VD +F GQ+ S V+C CGH S ++PF LS
Sbjct: 852 KDSNGRPDWEVASEAWENHLRRNRS-IVVD-LFHGQLKSQVKCKTCGHISARFDPFNFLS 909
Query: 384 LPVP 387
LP+P
Sbjct: 910 LPLP 913
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L + H G M GGHYV Y + PK K WY +D +EV EE+
Sbjct: 1462 YNLYAISCHSGIMGGGHYVTYAKN-PKKK-----------WYCYNDSSCKEVHSEEIDTD 1509
Query: 1033 EAYILFYEK 1041
AYILFYE+
Sbjct: 1510 SAYILFYEQ 1518
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 839 AVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEES 898
AV+ + LR SQE I ++ CSV+ + + AE + DS L A E E
Sbjct: 1193 AVDWDPTALHLRYQTSQERIVEE---HCSVEQSRRA--QAEPI-SLDSCLKAFTSEEELG 1246
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF 951
+ E K R ATK++ + + PPIL +HLKRF Q GR K V F
Sbjct: 1247 EDELYYCSKCKTHRLATKKLDLWRLPPILIVHLKRF-QFVNGRWIKSQKIVKF 1298
>gi|338729116|ref|XP_001917109.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Equus caballus]
Length = 960
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFL EL F PL + + + +A+ +
Sbjct: 301 GLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQA 360
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 361 WSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 420
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 421 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 479
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 480 PVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKI 513
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 808 ATKKLDLWMLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNE---S 862
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V V+
Sbjct: 863 APELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDSSVSPVTE 911
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 912 NQIESKAAYVLFYQR 926
>gi|195128351|ref|XP_002008627.1| GI11709 [Drosophila mojavensis]
gi|193920236|gb|EDW19103.1| GI11709 [Drosophila mojavensis]
Length = 710
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 116/299 (38%), Gaps = 44/299 (14%)
Query: 107 IWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKT 166
++ CL C ++ C G +H+ H R +H + ++ + L +C+ C I ++
Sbjct: 269 LYACLHCIYFGCRG--------AHITSHLRAKKHNIALELSHGTL-YCYACRDFIYDARS 319
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
E I R E + W E + N
Sbjct: 320 REYA------------IINRKLEAKDLQKSLGWIPWIPTPKETNLLLANARRRLVRPNQT 367
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGP-----LTIALKKLFAETKP 281
+RGL NLG TCF N ++Q L+ L DYF++ G L + +LF E
Sbjct: 368 IGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGKSSHKCLVCEVSRLFQEF-- 425
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFR-----KRNS 336
+G R ++ I + A GY+Q D+HE LD L + + K NS
Sbjct: 426 YSGSRTPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKSEHESKSNS 485
Query: 337 PSEGNGISSN-----------QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
S G SS+ Q +D +F G + S V C C ST ++PF D+SL
Sbjct: 486 SSATGGNSSSSANATATHSYGQCNCIIDQIFTGMLQSDVVCQACKGVSTTFDPFWDISL 544
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 902 EINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM 961
+I K +++TK+ + P +++ HLKRF A K++ + F ++ P+M
Sbjct: 578 KIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALID-RKISSFIQFPVEFDMTPFM 636
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
+ ++ + L VV H+GT+ GHY AYVR +K++ W D +
Sbjct: 637 SEKNNAYGDFRFSLYAVVNHVGTIDTGHYTAYVRH--------QKDT----WVKCDDHVI 684
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
SL++VL E Y+LFY K
Sbjct: 685 TMASLKQVLDSEGYLLFYHK 704
>gi|417413803|gb|JAA53213.1| Putative ubiquitin carboxyl-terminal hydrolase 19, partial
[Desmodus rotundus]
Length = 1377
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F E+ + G L I L
Sbjct: 594 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEINYNNPLGTGGRLAIGFAVLLRAL 653
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 654 --WKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 709
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 710 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 768
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 769 PVPLPQKQ 776
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1181 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1239
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R P ++ +++ VG W D V V
Sbjct: 1240 EQLPSYDLYAVINHYGGMIGGHYTACAR-LPSDR-SSQRSDVG--WRLFDDSTVTTVDES 1295
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1296 QVVTRYAYVLFYRR 1309
>gi|58269838|ref|XP_572075.1| ubiquitin carboxyl-terminal hydrolase 12 [Cryptococcus neoformans
var. neoformans JEC21]
gi|57228311|gb|AAW44768.1| ubiquitin carboxyl-terminal hydrolase 12, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 1490
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTI--ALKKLFAET---- 279
GL NLGNTCF NS +Q L +L YFL+ T PL + + + F +
Sbjct: 517 GLQNLGNTCFMNSAVQCLSNTKELSQYFLSGVYTEELNRDNPLGMQGQIAEAFGQVVENL 576
Query: 280 -KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN--- 335
P + + + +PR APQF GY QHD+ E + LLDGL + K+
Sbjct: 577 WAPTSSMHSSYSPRQLKWTTSRFAPQFAGYGQHDTQEFIAFLLDGLHEDLNRILKKPYIE 636
Query: 336 ----SPSEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
P G +G V VD +F GQ+ ST+ C EC S ++PF
Sbjct: 637 KPDWKPGGGDKELAELGKECWDGYKKRNDSVIVD-LFQGQLKSTLVCPECHKESITFDPF 695
Query: 380 LDLSLPVP 387
+ L++P+P
Sbjct: 696 MYLTVPLP 703
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 37/175 (21%)
Query: 892 NCESEESKVEEINS------KIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+C E SK E + + K + ATK++ I KAP IL I +KRF +R KL
Sbjct: 1138 DCLDEFSKEETLGQDDLWYCPVCKKHQAATKKLEIYKAPDILVICIKRFGS-SRRMGDKL 1196
Query: 946 NGHVNF----------------SEIINLRPYMDPGCTDHDNYD---YRLVGVVEHLGTMR 986
+ V+F ++ + L G D+ + Y L V H G M
Sbjct: 1197 DNLVHFPIDGLDLEDRIGERQVAKTLKLNGEDVEGYGIEDDGEPLLYDLYAVDNHFGGMG 1256
Query: 987 GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
GGHY A+ R N+ WY+ D V + + V AY+LFY +
Sbjct: 1257 GGHYTAFCRNQVDNQ-----------WYNYDDSRVSKADVSSVQSRAAYLLFYRR 1300
>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
Length = 538
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 86/175 (49%), Gaps = 23/175 (13%)
Query: 227 YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN-------------AELTFGPLTIALK 273
Y RGL NLGNTCF N+V+Q L + ++Y LN A+ LT +
Sbjct: 218 YRPRGLRNLGNTCFMNAVLQALACIKDFREYILNLPSLEDYVEDEKIAQNGNCFLTDEYQ 277
Query: 274 KLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRK 333
KL A R+ +P F S P+F+G++QHDSHE LR LLD + +E RK
Sbjct: 278 KLLASMSAR-NFRDPTSPNEFREAFVSACPRFRGFRQHDSHEFLRYLLDQMHTE---MRK 333
Query: 334 -RNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
RN P + ++ + F G + S+V C C + S + F+DLSL VP
Sbjct: 334 CRNLPEMPDDKTTP-----ISKSFEGTLQSSVICQTCRNVSNKMDDFMDLSLDVP 383
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 30/140 (21%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYM-----D 962
K K+ +K++ I K P +L +H+KRF +D G++ L + F +++ ++ +
Sbjct: 417 KSKQTCSKQMFIKKLPEVLCLHIKRF-RDNGGKIDTL---IEFPLTGLSVDDFLTEDSDE 472
Query: 963 PGCTDHDNYDYRLVGVVEHLGT-MRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L ++ H+G GHY+A+ R G K WY D V
Sbjct: 473 PPCV------YELHSIIVHIGYGCSSGHYIAFGRRGAK-------------WYQFDDTVV 513
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
+ + + + AY+L Y K
Sbjct: 514 KAMETSNITKQRAYVLMYTK 533
>gi|403307110|ref|XP_003944051.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Saimiri
boliviensis boliviensis]
Length = 674
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 121/291 (41%), Gaps = 33/291 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ RHA +H L + + + +CF C + + E+
Sbjct: 212 CLSCVFFGC-------FTEKHIHRHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 263
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--STVVSGSDLDGNACY 227
K+ ++++ + ST++S + E K + V + Y
Sbjct: 264 A--KETKEKILRFLTSTSTDVSHQQFMTSGIEDKQSICETKEQEPKLVKPKKKRRKKSVY 321
Query: 228 VV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
V RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 322 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 381
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 382 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 431
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
G +N +D +F G + S V C C ST +P D+SL +P
Sbjct: 432 SGGQETNNPNCCNCIIDQIFTGGLQSDVTCQTCHSVSTTIDPCWDISLDLP 482
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--------MDP 963
+++TK++ + K P + HLKRF + R K+N ++F +++ P+ M
Sbjct: 540 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKESRMKE 598
Query: 964 G-----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
G C ++N Y L V+ H GT+ GHY +++R +K+ W+ D
Sbjct: 599 GQPPTDCVPNEN-KYSLFAVINHHGTLESGHYTSFIR--------QQKDQ----WFSCDD 645
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 646 AIITKATIEDLLYSEGYLLFYHK 668
>gi|395856749|ref|XP_003800781.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22 [Otolemur garnettii]
Length = 725
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 121/302 (40%), Gaps = 43/302 (14%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTE-- 167
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 276 CLYCVFFGC-------FTKKHIHEHAKSKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 327
Query: 168 ENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACY 227
E + A ++G + S+ + E++ + N
Sbjct: 328 AKEEQRKAWK-----LQGVGEKFSTWE---------PTKRELELLKHNPKRRKITANCTI 373
Query: 228 VVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKP 281
+RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E
Sbjct: 374 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEF-- 431
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPS 338
+G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 432 YSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPN 491
Query: 339 EGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQP 398
N I +D +F G + S V C C ST +PF D+SL +P P P
Sbjct: 492 HCNCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSP 543
Query: 399 AS 400
S
Sbjct: 544 GS 545
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 590 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 648
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + + Y L VV H GT+ GHY +++R + K + W+ D
Sbjct: 649 QYQQPVDSLSSDNKYSLFAVVNHQGTLESGHYTSFIR-------QHKDQ-----WFKCDD 696
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 697 AIITKASIKDVLDSEGYLLFYHK 719
>gi|134113753|ref|XP_774461.1| hypothetical protein CNBG1070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257099|gb|EAL19814.1| hypothetical protein CNBG1070 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1487
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTI--ALKKLFAET---- 279
GL NLGNTCF NS +Q L +L YFL+ T PL + + + F +
Sbjct: 517 GLQNLGNTCFMNSAVQCLSNTKELSQYFLSGVYTEELNRDNPLGMQGQIAEAFGQVVENL 576
Query: 280 -KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN--- 335
P + + + +PR APQF GY QHD+ E + LLDGL + K+
Sbjct: 577 WAPTSSMHSSYSPRQLKWTTSRFAPQFAGYGQHDTQEFIAFLLDGLHEDLNRILKKPYIE 636
Query: 336 ----SPSEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
P G +G V VD +F GQ+ ST+ C EC S ++PF
Sbjct: 637 KPDWKPGGGDKELAELGKECWDGYKKRNDSVIVD-LFQGQLKSTLVCPECHKESITFDPF 695
Query: 380 LDLSLPVP 387
+ L++P+P
Sbjct: 696 MYLTVPLP 703
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 37/175 (21%)
Query: 892 NCESEESKVEEINS------KIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKL 945
+C E SK E + + K + ATK++ I KAP IL I +KRF +R KL
Sbjct: 1138 DCLDEFSKEETLGQDDLWYCPVCKKHQAATKKLEIYKAPDILVICIKRFGS-SRRMGDKL 1196
Query: 946 NGHVNF----------------SEIINLRPYMDPGCTDHDNYD---YRLVGVVEHLGTMR 986
+ V+F ++ + L G D+ + Y L V H G M
Sbjct: 1197 DNLVHFPIDGLDLEDRIGERQVAKTLKLNGEDVEGYGIEDDGEPLLYDLYAVDNHFGGMG 1256
Query: 987 GGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEK 1041
GGHY A+ R N+ WY+ D V + + V AY+LFY +
Sbjct: 1257 GGHYTAFCRNQVDNQ-----------WYNYDDSRVSKADVSSVQSRAAYLLFYRR 1300
>gi|327283671|ref|XP_003226564.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Anolis carolinensis]
Length = 510
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 131/330 (39%), Gaps = 42/330 (12%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G+ L + CL C + C + H+ HA+ R
Sbjct: 34 GSAEARKRKAKSCICHMCGAHL---NRLHSCLYCVFFGC-------FTKKHIHEHAKAKR 83
Query: 140 HPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAW 199
H L I + +CF C I + E+ + + + ++ I + + E
Sbjct: 84 HNLAIDLLYGGI-YCFMCQDYIYDKDMEQIAKEEQRKAWKLQGIGEKYSTWEPTKRELEL 142
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
+I + T+ +RGL NLGNTCF N ++Q L L+D+FL
Sbjct: 143 LRHNPKRRKITTNCTIG------------LRGLINLGNTCFMNCIVQALTHTPLLRDFFL 190
Query: 260 N------AELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS 313
+ + L + LF E +G R+ P + + A GY+Q D+
Sbjct: 191 SDRHKCEMQSPSSCLVCEMSTLFQEF--YSGHRSPHIPYRLLHLVWTHARHLAGYEQQDA 248
Query: 314 HELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECG 370
HE L LD L C + +K N+P+ N I +D +F G + S V C C
Sbjct: 249 HEFLIAALDVLHRHCKGDDNGKKANNPNHCNCI--------IDQIFTGGLQSDVTCQVCH 300
Query: 371 HSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
ST +PF D+SL +P P P S
Sbjct: 301 GVSTTIDPFWDISLDLPGSSTPFWPLSPGS 330
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 375 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 433
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 434 QYQQPADSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 481
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 482 AIITKASIKDVLDSEGYLLFYHK 504
>gi|444510630|gb|ELV09652.1| Laminin subunit beta-2 [Tupaia chinensis]
Length = 3008
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 2157 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 2216
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 2217 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 2272
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 2273 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 2331
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 2332 PVPLPQKQ 2339
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 2744 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 2802
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R P ++ +++ VG W D V V
Sbjct: 2803 EQLPSYDLYAVINHYGGMIGGHYTACAR-LPSDR-SSQRSDVG--WRLFDDSTVTTVDES 2858
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 2859 QVVTRYAYVLFYRR 2872
>gi|2459395|gb|AAB72237.1| ubiquitin protease [Homo sapiens]
Length = 963
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 88/188 (46%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + P F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPSMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>gi|345787444|ref|XP_533832.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Canis lupus familiaris]
Length = 1222
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F E+ + G L I L
Sbjct: 439 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEINYNNPLGTGGRLAIGFAVLLRAL 498
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 499 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 554
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 555 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 613
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 614 PVPLPQKQ 621
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1026 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1084
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1085 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1140
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1141 QVVTRYAYVLFYRR 1154
>gi|262118284|ref|NP_001160039.1| ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
gi|229558005|sp|P0C8Z3.1|UBP22_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|296476572|tpg|DAA18687.1| TPA: ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
Length = 514
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 122/302 (40%), Gaps = 39/302 (12%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I+ + +CF C I + E
Sbjct: 65 CLHCVFFGC-------FTKKHIHEHAKSKRHNLAIELMYGGI-YCFLCQDYIYDKDIEII 116
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 117 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 164
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 165 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 222
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 223 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 282
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 283 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 334
Query: 401 RA 402
+
Sbjct: 335 ES 336
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 379 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 437
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 438 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 485
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+ +VL E Y+LFY K
Sbjct: 486 AIITKASIADVLDSEGYLLFYHK 508
>gi|403357200|gb|EJY78221.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 473
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 30/204 (14%)
Query: 208 EIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA------ 261
+I+S+ V + N ++V GL N+GNTC+ NS++Q L A L DYFLN
Sbjct: 105 QIQSQQVV----KISNNRQFIVLGLKNIGNTCYMNSILQCLFASLPLSDYFLNGVFRKDY 160
Query: 262 ELTFGPLTIA--LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
E P+ I L + T + V P+ I K+ QF+ Q D+ E LRC
Sbjct: 161 ENQVRPINIGRDFFYLLNAIQNATQGQGVAVPQDLKLSISKKSSQFRSSGQQDAQEFLRC 220
Query: 320 LLDGLCSEEL-------AFRKRN-------SPSEG--NGISSNQGPVFVDYVFGGQIAST 363
LD L +EEL +++ N SEG S + + D +F GQ+
Sbjct: 221 FLDQL-NEELNRVTIKPPYKEENFDNLSVQEQSEGWWRYYKSRESSIIQD-IFEGQLHIR 278
Query: 364 VRCVECGHSSTVYEPFLDLSLPVP 387
+C CG+ S ++ F+D+S+PVP
Sbjct: 279 TKCQLCGYESHKFDNFMDISVPVP 302
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 18/130 (13%)
Query: 917 RVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRP---YMDPGCTDHDNYDY 973
++ I++ P IL +HLKRF + + KLN ++ +II++ P Y + + N Y
Sbjct: 348 QMTISRFPKILVLHLKRFQYNMSWK-QKLNTKIDIPKIIDMSPFAPYSNEAYSSRKNV-Y 405
Query: 974 RLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCE 1033
+ G+ H G++ GHY A ++ + G W++ +D V +++ E
Sbjct: 406 SIFGICHHFGSLSSGHYTAEIK------------TPNGRWFNCNDSIVEQIATPNFDASE 453
Query: 1034 -AYILFYEKI 1042
AY+LFY+ I
Sbjct: 454 SAYLLFYQLI 463
>gi|126339681|ref|XP_001370825.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like [Monodelphis
domestica]
Length = 716
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 26/156 (16%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
C+ +K + +SK V + +A K++++ + P +L +HLKRF R K+ HV F
Sbjct: 540 CDQCNTKRRKFSSKPV-ILTEAQKQLMVCRLPQVLRLHLKRFRWSGRNHREKIGVHVGFD 598
Query: 953 EIINLRPY--------MDPGCTDHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVK 1003
EI+N+ PY + P C + Y L VV H G G GHY AY
Sbjct: 599 EILNMEPYCYRESLKSLRPDC-----FIYDLSAVVMHHGKGFGSGHYTAYCYN------- 646
Query: 1004 AKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
S GG W H +D + +LEEV + +AYILFY
Sbjct: 647 ----SEGGFWVHCNDSKLNMCTLEEVCKAQAYILFY 678
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+G +++P + + P F+GY Q D+ E L LLD + EL P+
Sbjct: 396 SGKWALVSPFAMLHSVWRLIPAFRGYAQQDAQEFLCELLDKV-QHELETTGTRYPAL--- 451
Query: 343 ISSNQGPVF------VDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
I S+Q + V+ +F GQ+ S V C+ C + S EPF DLSL P +
Sbjct: 452 IPSSQKKLIKQVLNVVNTIFHGQLLSQVTCLACDNKSNTIEPFWDLSLEFPER 504
>gi|149758441|ref|XP_001487991.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Equus
caballus]
Length = 727
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 129/309 (41%), Gaps = 34/309 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + E+
Sbjct: 266 CLSCVFFGC-------FTEKHIHKHAETKQHNLAVDLYHG-VVYCFMCKDYVYDRDIEQI 317
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--STVVSGSDLDGNACY 227
K+ +++KL+ ST++S + E+K + V + Y
Sbjct: 318 A--KETKGKILKLLISISTDVSQQQCMTSGVEEKQTICELKEQEPKLVKPKKKRRKKSVY 375
Query: 228 VV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
V RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 376 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 435
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 436 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 485
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKT 396
G +N +D +F G + S V C C ST +P D+SL +P A + +
Sbjct: 486 SVGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSYA-TFGS 544
Query: 397 QPASRAKKT 405
Q RA T
Sbjct: 545 QSPERADST 553
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 26/142 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPG------- 964
+++TK++ + K P + HLKRF + R K+N ++F +++ P++
Sbjct: 594 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKDSRMEG 652
Query: 965 -----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDV 1019
C ++N Y L V+ H GT+ GHY +++R +K+ W+ D
Sbjct: 653 QLPTDCAPNEN-KYSLFAVINHHGTLESGHYTSFIR--------QQKDQ----WFSCDDA 699
Query: 1020 YVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 700 VITKATIEDLLYSEGYLLFYHK 721
>gi|320165140|gb|EFW42039.1| NY-REN-60 antigen [Capsaspora owczarzaki ATCC 30864]
Length = 2127
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKP 281
+ GL NLGNTCF NS +Q + L YFLN T+ P+ + + K +A
Sbjct: 1235 LTGLHNLGNTCFLNSALQCVNNTQPLTQYFLNGLHTYEFNVNNPIGMKGEVAKQYAALVQ 1294
Query: 282 ET--GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE----------EL 329
+ G ++P I P+F +QQHD+ E L LLDGL + EL
Sbjct: 1295 QVWAGTSTSVSPAKLRSTIAKYEPRFSSFQQHDAQEFLAFLLDGLHEDLNRVLSKPYVEL 1354
Query: 330 AFRKRNSPSE-------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ +P E N N+ + VD +F GQ+ S VRC C H S ++PF L
Sbjct: 1355 KDCEDGTPDEIVAAQWWDNHFKRNRS-IIVD-LFHGQLKSQVRCQTCNHISVSFDPFTFL 1412
Query: 383 SLPVPTK 389
SLP+P +
Sbjct: 1413 SLPLPVE 1419
Score = 43.1 bits (100), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L V H+G + GGHY+A + G WY +D + + E +
Sbjct: 2033 YDLYAVSNHMGALGGGHYIANAKHS------------NGKWYTFNDSICKPAAQESIHSP 2080
Query: 1033 EAYILFYEK 1041
AY+LFY++
Sbjct: 2081 AAYVLFYQR 2089
>gi|440907885|gb|ELR57973.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Bos grunniens
mutus]
Length = 468
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 122/302 (40%), Gaps = 39/302 (12%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I+ + +CF C I + E
Sbjct: 19 CLHCVFFGC-------FTKKHIHEHAKSKRHNLAIELMYGGI-YCFLCQDYIYDKDIEII 70
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 71 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 118
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 119 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 176
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 177 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 236
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 237 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 288
Query: 401 RA 402
+
Sbjct: 289 ES 290
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 333 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 391
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 392 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 439
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+ +VL E Y+LFY K
Sbjct: 440 AIITKASIADVLDSEGYLLFYHK 462
>gi|291220896|ref|XP_002730462.1| PREDICTED: ubiquitin specific peptidase 15-like [Saccoglossus
kowalevskii]
Length = 1624
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 92/184 (50%), Gaps = 31/184 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKPE- 282
GL+NLGNTCF NS +Q + L YF + + PL + + K + + +
Sbjct: 743 GLSNLGNTCFMNSALQCISNTKPLTKYFNDNMHQYEFNKTNPLGMKGHIAKRYGDLVQDL 802
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G I P I AP+F G+QQHDS ELL LLDGL E+L R +N P
Sbjct: 803 WSGTSKSIAPLKLRWTIGKYAPRFNGFQQHDSQELLAFLLDGL-HEDLN-RVQNKPYVEL 860
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
S+G N + N+ V VD +F GQ+ S V C ECG+ S ++PF LS
Sbjct: 861 KDSDGRPDEEVADEAWENHMLRNRS-VIVD-LFHGQLRSLVCCKECGNESVRFDPFTYLS 918
Query: 384 LPVP 387
LP+P
Sbjct: 919 LPLP 922
>gi|303284199|ref|XP_003061390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456720|gb|EEH54020.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 308
Score = 87.8 bits (216), Expect = 3e-14, Method: Composition-based stats.
Identities = 60/172 (34%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVIN 290
GLANLGNTCF N+VMQ L L + L E + + + G R+ I
Sbjct: 12 GLANLGNTCFMNAVMQCLTHTPPLAQFCLAGEHRNA--LYEMGEHVSRALGREGRRHTIA 69
Query: 291 PRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPV 350
P +F + + + F+ +Q D+HE RCLLD + + R P EG+ S
Sbjct: 70 PATFVKNLRALSKTFRKGRQEDAHEFARCLLDAM-HKRCVDAARPKPKEGSARSETS--- 125
Query: 351 FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRA 402
FV VFGG++ S V C CG S ++ F+DLSL V A S+ Q A ++
Sbjct: 126 FVWQVFGGRLRSRVACKTCGKMSDTFDSFMDLSLDV----ARSRSVQSALKS 173
Score = 54.7 bits (130), Expect = 3e-04, Method: Composition-based stats.
Identities = 63/204 (30%), Positives = 82/204 (40%), Gaps = 36/204 (17%)
Query: 842 MQSRSSCLRDSCSQESITDQDEGSCSVDGATS-SGYSAEKVYQSDSQLVAGN---CESEE 897
++SR +C +C + S T S+D A S S SA K Y + L N CE
Sbjct: 135 LRSRVAC--KTCGKMSDTFDSFMDLSLDVARSRSVQSALKSYTAVEVLDGANKYKCEMGP 192
Query: 898 SKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINL 957
K ATK+ I+ AP +LTI AR KLN V + +++
Sbjct: 193 GKPHMTR---------ATKQFTIDAAPKVLTIQ-------ARFTRRKLNQFVEYPTRLDV 236
Query: 958 RPYM-DPGCTDHDNYDYRLVGVVEHLG-TMRGGHYVAYVRGGPKNKVKAKKESVGGVWYH 1015
M D Y L GV+ H G +M GHY YV+G G WY
Sbjct: 237 SEAMSDASPRARGRERYSLFGVLVHSGGSMHSGHYYCYVKGST------------GHWYE 284
Query: 1016 ASDVYVREVSLEEVLRCEAYILFY 1039
D V VS + L AY+LFY
Sbjct: 285 MDDEGVSPVSEKTALSQRAYLLFY 308
>gi|17541074|ref|NP_501035.1| Protein H34C03.2 [Caenorhabditis elegans]
gi|351050439|emb|CCD65007.1| Protein H34C03.2 [Caenorhabditis elegans]
Length = 900
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 91/195 (46%), Gaps = 34/195 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-----------NAELTFGPLTIALKKLFAET 279
GL+NLGNTCF S Q L M L++YFL N T G L +A+ +L
Sbjct: 276 GLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGELMKGM 335
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G INPR F I AP+F GY Q D+HEL+ +LDGL E+L R + P
Sbjct: 336 --WSGDYASINPRKFKSIIGQFAPRFNGYSQQDAHELMAYVLDGL-HEDLN-RIKKKPYI 391
Query: 340 GNGISSNQGP------------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
+ + P + VD GQ+ ST+ C C S ++PF
Sbjct: 392 EDSDEDAKLPEAEYAAKSWEVYKMRNDSIIVD-TLHGQLKSTLICPVCEKISIKFDPFGY 450
Query: 382 LSLPVPTKKAPSKKT 396
LSLP+P K+ K+T
Sbjct: 451 LSLPLPPKEQIVKQT 465
Score = 43.9 bits (102), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD------ 967
ATK++ + K P IL +HLKRF R KL V + P TD
Sbjct: 730 ATKQLALWKLPEILILHLKRFQYTKWSR-EKLTWEV-------VIPVRGLDLTDKVANPN 781
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVA 992
H+ Y L+ V H G++ GGHY A
Sbjct: 782 HEKAIYDLIAVSRHYGSLSGGHYTA 806
>gi|47224929|emb|CAG06499.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1669
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 91/184 (49%), Gaps = 31/184 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q + L DYFL+ + P+ + + K + + E
Sbjct: 767 GLSNLGNTCFMNSSIQCVSNTKPLTDYFLSGRHLYELNRTNPIGMRGHMAKCYGDLVMEL 826
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + + P I AP+F G+QQ DS ELL LLDGL E+L R P
Sbjct: 827 WSGTQKSVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGL-HEDLN-RVHEKPYVEL 884
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
S G N + N+ + VD +F GQ+ S V+C CGH S ++PF LS
Sbjct: 885 KDSNGRPDWEVASEAWENHLRRNRS-IVVD-LFHGQLKSQVKCKTCGHISARFDPFNFLS 942
Query: 384 LPVP 387
LP+P
Sbjct: 943 LPLP 946
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L + H G M GGHYV Y + PK K WY +D +EV EE+
Sbjct: 1575 YNLYAISCHSGIMGGGHYVTYAKN-PKKK-----------WYCYNDSSCKEVQSEEIDAD 1622
Query: 1033 EAYILFYEK 1041
AYILFYE+
Sbjct: 1623 SAYILFYEQ 1631
Score = 44.7 bits (104), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 839 AVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEES 898
AV+ + LR SQE I ++ CSV+ + + AE + DS L A E E
Sbjct: 1255 AVDWDPTALHLRYQTSQERIVEEH---CSVEQSRRA--QAEPI-SLDSCLKAFTSEEELG 1308
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF 951
+ E K R ATK++ + + PPIL +HLKRF Q GR K V F
Sbjct: 1309 EDELYYCSKCKTHRLATKKLDLWRLPPILIVHLKRF-QLVNGRWIKSQKIVKF 1360
>gi|195999732|ref|XP_002109734.1| hypothetical protein TRIADDRAFT_52906 [Trichoplax adhaerens]
gi|190587858|gb|EDV27900.1| hypothetical protein TRIADDRAFT_52906 [Trichoplax adhaerens]
Length = 488
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 30/288 (10%)
Query: 105 KAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVE 164
K ++ C+ C C SH+ HA+ +H L I L +C C I
Sbjct: 54 KRLYACVQCVFVGC-------YDHSHIQHHAKVAKHQLAIDTLRGTL-FCTECGKHI--- 102
Query: 165 KTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGN 224
+ + EN + KG ++ + W S E++ S + L
Sbjct: 103 -YDPDVENIHCQRMQLPSCKGHLKQVYKYNY---WRPSA---KEVQLLSRNNTRYKLSLK 155
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGP------LTIALKKLFAE 278
+ ++GLANLGNTCF NS++Q L+ L+DYFL+ + + L +F +
Sbjct: 156 SKIGLKGLANLGNTCFMNSIVQALVHTPILRDYFLSDKHQCSHDNNNTCIACELASIFQK 215
Query: 279 TKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS 338
L ++ P I + A GY Q D+HE L +L+ L KR S
Sbjct: 216 FYSVGSLPHI--PNKLLYLIWTNARHMAGYVQQDAHEFLIAILNAL----HGHFKRELSS 269
Query: 339 EGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
N I N V +F G + S V C +CG++ST +PF D+S+ +
Sbjct: 270 SFNEIIDNNCRCIVHQIFAGNMQSDVTCQKCGNTSTTIDPFFDISMDI 317
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 30/125 (24%)
Query: 933 RFSQDAR-GRLSKLNGHVNFSEIINLRPYM--------DPGCTDHDN-------YDYRLV 976
RF + GR K+ +V FS+I++++PY+ + G D+ N Y L
Sbjct: 372 RFEHSKKFGR--KITTYVAFSDILDMKPYVSKLRINNGESGHADNQNAKSCSSSVRYCLF 429
Query: 977 GVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
V+ H GT+ GHY YVR P N+ W+ D +R+ + ++VL E Y+
Sbjct: 430 AVINHSGTLDSGHYTCYVRQ-PYNQ-----------WFECDDAKIRKATTKDVLSSEGYL 477
Query: 1037 LFYEK 1041
LFY +
Sbjct: 478 LFYHR 482
>gi|359319450|ref|XP_851968.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Canis lupus
familiaris]
Length = 474
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I+ + +CF C I + E
Sbjct: 25 CLHCVFFGC-------FTKKHIHEHAKSKRHNLAIELMYGGI-YCFLCQDYIYDKDIEII 76
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 77 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 124
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 125 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 182
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 183 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 242
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 243 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 294
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 339 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 397
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 398 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 445
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+E+VL E Y+LFY K
Sbjct: 446 AIITKASIEDVLDSEGYLLFYHK 468
>gi|198433676|ref|XP_002129026.1| PREDICTED: similar to ubiquitin specific protease 41 [Ciona
intestinalis]
Length = 543
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 21/180 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT-----FGPLTIALKKLFAETKPETGL 285
GL N+GNTCF NS++Q L + L++Y ++ P+ L + F E
Sbjct: 202 GLRNIGNTCFMNSILQCLSNTTILREYCMDETYKGEINRNSPMKGDLMRAFVEVLVRLWK 261
Query: 286 RNVIN--PRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL----------CSEELAFRK 333
N I+ P +F I +P+F GY+Q D E LR LL+GL E L
Sbjct: 262 PNGISHSPNNFKSKIQKFSPRFMGYEQQDCQEFLRFLLEGLHEDINRVRIKSKEPLRELS 321
Query: 334 RNSPSEGNGIS----SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
SP E + + + F+ +F GQ+ S++ C EC H+S Y+PF DLSLP+ K
Sbjct: 322 HLSPQEKARATWSWYTTKDDSFIFDLFVGQLESSLECQECRHTSLTYDPFWDLSLPISKK 381
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTD 967
KV+R TK++ I+K P +L +HLKRF++ +R R KLN V F +NLR +
Sbjct: 415 KVRRTMTKKLSIHKFPKVLVLHLKRFNEGSRYR-QKLNNLVKFPVTSLNLRNFASKTREG 473
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y L V H G+ GGHY AY S W +D V +S
Sbjct: 474 NLPPTYDLYAVSNHCGSCYGGHYTAYCYN-----------SSSHAWLEYNDSSVNPISDG 522
Query: 1028 EVLRCEAYILFY 1039
+V EAY+LFY
Sbjct: 523 DVCTKEAYVLFY 534
>gi|413923519|gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 591
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 87/167 (52%), Gaps = 22/167 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT--FGPLTI---------ALKKLFAET 279
GL+N+GNTCF N+ +Q + L FL T P + ALK+ E+
Sbjct: 45 GLSNMGNTCFLNATLQCITHTVPL---FLKLRSTDHSTPCSYNKDGFCSFCALKEHVDES 101
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G +VI P F + + F QQ D+HE LRCLLD L L + S+
Sbjct: 102 IQRSG--SVIAPAKFRDNLRKLSSDFWPGQQEDAHEFLRCLLDNLHKCTL-----DPMSK 154
Query: 340 GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G G S ++ + V+ +FGGQ+ S + C ECGHSS +EPFLDLSL +
Sbjct: 155 GKGSSFDEESI-VNEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEI 200
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 41/175 (23%)
Query: 871 ATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIH 930
A S E++ S+++L +C ++ SK K++ +++AP ++ H
Sbjct: 209 ALQSFTKVEQIGDSENKLTCESCNAQVSK---------------NKQLTLHRAPDVIAFH 253
Query: 931 LKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYD------YRLVGVVEHLGT 984
LKRF+ + K++ HV + ++L+P+ H N D Y L GVVEH G
Sbjct: 254 LKRFTT-LDNSVEKIDKHVVYPLEVDLKPF-------HSNPDTVGGLKYDLYGVVEHSGL 305
Query: 985 MRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
GHY +R P WY +D V + L EAYILFY
Sbjct: 306 PNYGHYTCTIRSSP------------STWYFMNDSKVDSCTDSSALNQEAYILFY 348
>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
niloticus]
Length = 1082
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF--------LNAELTFG-------PLTIALKKL 275
GL NLGNTC+ NS++Q L L +YF +N G + +K L
Sbjct: 751 GLRNLGNTCYMNSILQCLCNTPALAEYFNNNCYLEDINRHNILGHKGEVAEEFGVIMKAL 810
Query: 276 FAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRK 333
+A GL I+PR F I QF GY Q DS ELL L+DGL + + RK
Sbjct: 811 WA------GLYKCISPRDFKITIGKINEQFAGYDQQDSQELLLFLMDGLHEDLNKADNRK 864
Query: 334 RNSPSEGNGISSNQGP------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
R E + + G + +F GQ STV+C+ C S +E F+
Sbjct: 865 RYKEEENDHLDDQTGADLAWSKHKLLNESIIVALFQGQFKSTVQCLTCHRKSRTFETFMY 924
Query: 382 LSLPV 386
LSLP+
Sbjct: 925 LSLPL 929
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 29/203 (14%)
Query: 841 EMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAE---KVYQSDSQLVAGNCESEE 897
+ +S CL +C ++S T + S+ A++S S + +++ + +L N
Sbjct: 902 QFKSTVQCL--TCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNN----- 954
Query: 898 SKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIIN 956
++ + K RD+TK++ I K PPIL +HLKRFS + R + KL V+F + ++
Sbjct: 955 ----KVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWK-QKLQTSVDFPLDNLD 1009
Query: 957 LRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHA 1016
L Y+ Y+ L GV H G + GGHY AY + K + WY
Sbjct: 1010 LAQYVIGPKQSLKRYN--LYGVSNHYGGLDGGHYTAYCKNAAKQR-----------WYKF 1056
Query: 1017 SDVYVREVSLEEVLRCEAYILFY 1039
D V ++S V AYILFY
Sbjct: 1057 DDHEVSDISTSSVKSSAAYILFY 1079
>gi|301620627|ref|XP_002939670.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Xenopus
(Silurana) tropicalis]
Length = 1059
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 213 STVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLTIAL 272
S + S + + G A + GL NLGNTC+ NS++Q L L +YF N F I
Sbjct: 701 SKIRSLNPVFGGAGPALTGLRNLGNTCYMNSILQCLCNTPHLIEYFNN---NFYQAHINR 757
Query: 273 KKLFA---ETKPE---------TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCL 320
L E E TG I+P+ F I QF GY DS ELL L
Sbjct: 758 SNLLGHKGEVAEEFGCIMRALWTGQYKYISPKDFKITIGKINEQFAGYTHQDSQELLLFL 817
Query: 321 LDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDY------------VFGGQIASTVR 365
+DGL +++ RKR + +S +Q Y +F GQ STV+
Sbjct: 818 MDGLHEDLNKKADNRKRQKEENNDHLSDSQAADSAWYKHKQLNESIIVALFQGQFKSTVQ 877
Query: 366 CVECGHSSTVYEPFLDLSLPVPT 388
C+ C S +E F+ LSLP+P+
Sbjct: 878 CLTCQKKSRTFEAFMYLSLPLPS 900
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 16/132 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K +R ATK++ I K PPIL +HLKRFS + R R KL +V+F E ++L Y+
Sbjct: 931 KTQRVATKKIEIWKLPPILLVHLKRFSFEGRWR-QKLQSYVDFPLESLDLSQYV---IGP 986
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y L GV H G + GGHY AY + K + W+ D V E+S+
Sbjct: 987 KNVKTYNLFGVSNHYGGLDGGHYTAYCKNALKQR-----------WFKFDDHDVSEISVS 1035
Query: 1028 EVLRCEAYILFY 1039
V AY+LFY
Sbjct: 1036 SVKTSAAYMLFY 1047
>gi|417412856|gb|JAA52787.1| Putative ubiquitin carboxyl-terminal hydrolase 11, partial
[Desmodus rotundus]
Length = 833
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 87/183 (47%), Gaps = 27/183 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFL EL F PL + + + +A+ +
Sbjct: 178 GLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQA 237
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE-- 339
+G I P F + A QF GYQQHDS ELL LLDGL E+L K+ E
Sbjct: 238 WSGHHRSIVPNVFKTKVGHFASQFLGYQQHDSQELLSFLLDGL-HEDLNRVKKKEYVELC 296
Query: 340 --------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
V VD F G ST+ C +CG+ S ++PF LS+P
Sbjct: 297 DAAGRPDHEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVP 355
Query: 386 VPT 388
+P
Sbjct: 356 LPV 358
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P L IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 679 ATKKLDLWTLPETLIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IKPQNE---S 733
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ Y Y L+ V H G +R GHY + K+S G W++ D V VS
Sbjct: 734 APELYKYDLIAVSNHYGGLRDGHYTTFA---------CNKDS--GQWHYFDDSSVSPVSE 782
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 783 NQIESKAAYVLFYQR 797
>gi|308799161|ref|XP_003074361.1| putative queuine tRNA-ribosyltransferase (ISS) [Ostreococcus tauri]
gi|116000532|emb|CAL50212.1| putative queuine tRNA-ribosyltransferase (ISS) [Ostreococcus tauri]
Length = 2214
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL-----------TFGPLTIALKKLFAET 279
GL+NLGNTCF NS +Q L S L DYFL+ + G L L
Sbjct: 683 GLSNLGNTCFMNSALQCLSHSSLLTDYFLSDKYEGDINTDNPIGMGGELAKEYANLIGAL 742
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+ L + PR F + APQF GY Q D+ ELL LLDGL E+L KR E
Sbjct: 743 WRDGAL--TVTPRKFKHSLARFAPQFSGYMQQDAQELLAFLLDGL-HEDLNRVKRKPYVE 799
Query: 340 ---GNGIS-------------SNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
+G + + VD F GQ ST+ C C + S ++PF+ LS
Sbjct: 800 ERDADGRTDEDVAHESWEAHLARNDSCIVD-TFQGQYRSTLVCPSCSNKSVKFDPFMYLS 858
Query: 384 LPVPT 388
+PVP+
Sbjct: 859 IPVPS 863
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYD 972
A K++ + + PPIL +HLKRFS +R K++ V+F +++ PY+ +
Sbjct: 1179 ALKKLDLWRMPPILVMHLKRFSY-SRIYRDKIDTLVHFPLNDLDMSPYVLANTSSGPAPV 1237
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L VV H G M GGHY AY R + G W+ D V L
Sbjct: 1238 YDLYAVVNHFGGMGGGHYTAYTRHAEE-----------GTWHLYDDSRCTPVESTAALNN 1286
Query: 1033 E-AYILFYEK 1041
+ AY++FY++
Sbjct: 1287 KAAYVVFYKR 1296
>gi|224066024|ref|XP_002192515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Taeniopygia
guttata]
Length = 904
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 95/186 (51%), Gaps = 29/186 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELT-FGPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L DYFL AE+ PL + + + +A+ +
Sbjct: 268 GLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYADLIKQM 327
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G ++ + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 328 WSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYLEL 385
Query: 338 SEGNGISSNQ-------------GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ NG ++ + VD +F G ST+ C +C S ++PF L+L
Sbjct: 386 KDANGRPDSEVAKEAWENHRLRNDSIIVD-IFHGLFKSTLVCPKCSKVSVTFDPFCYLTL 444
Query: 385 PVPTKK 390
P+P ++
Sbjct: 445 PLPLRR 450
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS R KL+ V F +N+ ++ DP
Sbjct: 763 KKHQQATKKFDLWSLPRILVVHLKRFSYSRYWR-DKLDTVVEFPIRGLNMSEFVCDPRA- 820
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+Y Y L+ V H G M GHY AY KNKV K WY+ D V S
Sbjct: 821 --GSYVYDLIAVSNHYGAMGVGHYTAYA----KNKVNNK-------WYYFDDSSVSVASE 867
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFYE+
Sbjct: 868 DQIVTKAAYVLFYER 882
>gi|395748703|ref|XP_002827183.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pongo abelii]
Length = 746
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 297 CLYCVFFGC-------FTKKHIHEHAKSKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 348
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 349 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 396
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 397 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEF--YS 454
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 455 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 514
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 515 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 566
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 611 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 669
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R + K + W+ D
Sbjct: 670 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIR-------QHKDQ-----WFKCDD 717
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 718 AIITKASIKDVLDSEGYLLFYHK 740
>gi|345320897|ref|XP_003430360.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 19-like [Ornithorhynchus anatinus]
Length = 1385
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 84/188 (44%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+DYF E+ + G L I L
Sbjct: 545 GLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFEMEINYSNPLGTGGRLAIGFAGLLRTL 604
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + KA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 605 --WKGTHHAFQPSKLKAIVAGKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 660
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P FV +F GQ S + C C S ++PFL L
Sbjct: 661 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFVVDLFQGQYKSKLVCPVCTKVSITFDPFLYL 719
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 720 PVPLPQKQ 727
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++++ + P +L I LKRFS + K+N V F ++L + D
Sbjct: 1149 KQHREASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVEFPVRNLDLSKFCIGQKDD 1208
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
H Y L V+ H G M GGHY AY R P +K +++ VG W D V V
Sbjct: 1209 HQLPTYDLYAVINHYGGMIGGHYTAYAR-LPSDK-NSQRSDVG--WRLFDDSTVTTVDES 1264
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1265 QVVTRYAYVLFYRR 1278
>gi|345305249|ref|XP_001511206.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Ornithorhynchus anatinus]
Length = 540
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E+
Sbjct: 91 CLYCVFFGC-------FTKKHIHEHAKTKRHNLAIDLLYGGI-YCFMCQDYIYDKDLEQI 142
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ I + + E +I + T+ +
Sbjct: 143 AKEEQRKAWKLQGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIG------------L 190
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 191 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFY--S 248
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 249 GHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 308
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 309 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 360
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 405 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 463
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 464 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 511
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 512 AIITKASIKDVLDSEGYLLFYHK 534
>gi|348521258|ref|XP_003448143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like [Oreochromis
niloticus]
Length = 689
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 41/256 (16%)
Query: 813 EVESGLTNDVNPAVPQREKGKMKINDAV-------EMQSRSSCLRDSCSQESITDQDEGS 865
E+ES + + VPQ +K +K +V ++ S+ +CL +C S T +
Sbjct: 438 ELESTGKHTTSAGVPQTQKRLIKQVLSVVNTIFHGQLLSQVTCL--ACDHRSNTVEPFWD 495
Query: 866 CSVD------------GATSSGYSAEKVYQ-SDSQLVAGN---CESEESKVEEINSKIVK 909
S++ A +S + E + + ++++ + GN C+ S +SK V
Sbjct: 496 LSLEFPERYHSNSRESAAQASCHLTEMLAKFTETEALEGNIYACDQCNSARRRTSSKPV- 554
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---DPGCT 966
+ +A K+++++K P +L +HLKRF R K+ HV+F +++N+ PY G
Sbjct: 555 ILTEAQKQLMVHKLPQVLRLHLKRFRWSGRNHREKIGVHVSFDQLLNMEPYCCRDAAGSP 614
Query: 967 DHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVS 1025
++ Y L VV H G G GHY AY + GG W H +D + S
Sbjct: 615 RPKHFLYELSAVVMHHGKGFGSGHYTAYC-----------YNTEGGFWVHCNDSKLNVCS 663
Query: 1026 LEEVLRCEAYILFYEK 1041
++EV R +AYILFY +
Sbjct: 664 VDEVCRAQAYILFYTQ 679
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+G +++P + + P F+GY Q D+ E L LLD + EL +++ S G
Sbjct: 394 SGKWALVSPFAMLHSVWQLIPAFRGYAQQDAQEFLCELLDKV-QHELESTGKHTTSAGVP 452
Query: 343 ISSN----QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+ Q V+ +F GQ+ S V C+ C H S EPF DLSL P +
Sbjct: 453 QTQKRLIKQVLSVVNTIFHGQLLSQVTCLACDHRSNTVEPFWDLSLEFPER 503
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLI 161
+++IW CLGC H ACG + H ++H +Q HPL ++ ++ +C+ C+ +
Sbjct: 32 TESIWGCLGCAHVACGRY-----IEEHALQHFQQQGHPLAMEVNELYV-FCYLCDDYV 83
>gi|117558705|gb|AAI26899.1| USP22 protein [Homo sapiens]
Length = 513
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 64 CLYCVFFGC-------LTKKHIHEHAKAKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 115
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 116 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 163
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 164 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 221
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 222 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 281
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 282 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 333
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 378 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 436
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 437 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 484
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 485 AIITKASIKDVLDSEGYLLFYHK 507
>gi|441677858|ref|XP_003281169.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Nomascus
leucogenys]
Length = 649
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 200 CLYCVFFGC-------FTKKHIHEHAKSKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEMI 251
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 252 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 299
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 300 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 357
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 358 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 417
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 418 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 469
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 514 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 572
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVR 995
P + +++ Y L VV H GT+ GHY +++R
Sbjct: 573 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIR 609
>gi|397466402|ref|XP_003804951.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pan paniscus]
Length = 513
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 64 CLYCVFFGC-------FTKKHIHEHAKAKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 115
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 116 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 163
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 164 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 221
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 222 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 281
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 282 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 333
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 378 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 436
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 437 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 484
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 485 AIITKASIKDVLDSEGYLLFYHK 507
>gi|348517076|ref|XP_003446061.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Oreochromis niloticus]
Length = 1009
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTIA--LKKLFAETKP 281
V GL NLGNTCF NS +Q L L +YFL EL F PL + + + +A+
Sbjct: 242 VCGLTNLGNTCFMNSALQCLSNTPPLTEYFLQNSYVDELNFTNPLGMKGEIAEAYADVIK 301
Query: 282 E--TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLC--------SEELAF 331
+ +G + PR F + A QF GYQQHDS ELL LLDGL E +
Sbjct: 302 QMWSGRHYSVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYIEL 361
Query: 332 RKRNSPSEG--------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
R + + N + N V VD F G ST+ C EC S ++PF LS
Sbjct: 362 RDADGRQDQEVAEEAWRNHLRRNDS-VIVD-TFHGLFKSTLVCPECHKVSVTFDPFCYLS 419
Query: 384 LPVPTKK 390
+P+P K
Sbjct: 420 VPLPVSK 426
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 907 IVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM--DP 963
+ K + ATK++ + P +L IHLKRFS R KL+ V F ++ ++
Sbjct: 832 VCKKHQLATKKLDLWSLPEVLIIHLKRFSYTKFTR-EKLDSIVEFPLRDLDFSGFLLRKT 890
Query: 964 GCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVRE 1023
++ Y L+ V H G +R GHY Y KNK G WY+ D V
Sbjct: 891 LSSEEPPSRYDLIAVSNHYGGLRDGHYTTYA----KNKD-------NGQWYYFDDSKVTY 939
Query: 1024 VSLEEVLRCEAYILFYEK 1041
+ ++++ AY+LFY++
Sbjct: 940 ATEDQIVTSAAYVLFYQR 957
>gi|344298090|ref|XP_003420727.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Loxodonta
africana]
Length = 592
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 143 CLYCVFFGC-------FTKKHIHEHAKSKRHNLAIDLTYGGI-YCFLCQDYIYDKDMEII 194
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 195 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 242
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 243 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSSLFQEFY--S 300
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 301 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 360
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 361 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 412
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 457 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 515
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R + K + W+ D
Sbjct: 516 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIR-------QHKDQ-----WFKCDD 563
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 564 AIITKASIKDVLDSEGYLLFYHK 586
>gi|432895001|ref|XP_004076037.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Oryzias
latipes]
Length = 1581
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 92/184 (50%), Gaps = 31/184 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q + L DYF++ + P+ + + K + + E
Sbjct: 735 GLSNLGNTCFMNSSIQCVSNTKPLTDYFISGRHLYELNRTNPIGMRGHMAKCYGDLVMEL 794
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + + P I AP+F G+QQ DS ELL LLDGL E+L R P
Sbjct: 795 WSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGL-HEDLN-RVHEKPYVEL 852
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
S+G N + N+ + VD +F GQ+ S V+C CGH S ++PF LS
Sbjct: 853 KDSDGRPDWEVASEAWENHLRRNRS-IIVD-LFHGQLKSQVKCKTCGHISARFDPFNFLS 910
Query: 384 LPVP 387
LP+P
Sbjct: 911 LPLP 914
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L + H G M GGHYV Y + P K WY +D +EV EE+
Sbjct: 1487 YNLYAISCHSGIMGGGHYVTYAKN-PNRK-----------WYCYNDSSCKEVHSEEIDTD 1534
Query: 1033 EAYILFYEK 1041
AYILFYE+
Sbjct: 1535 SAYILFYEQ 1543
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 839 AVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEES 898
AV+ + LR SQE I ++ CSV+ + + AE + DS L A E E
Sbjct: 1192 AVDWDPTALHLRYQTSQERIVEEH---CSVEQSRRA--QAEPI-SLDSCLKAFTSEEELG 1245
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF 951
+ E K R ATK++ + + PPIL +HLKRF Q GR K V F
Sbjct: 1246 EDELYYCSKCKTHRLATKKLDLWRLPPILIVHLKRF-QFVNGRWIKSQKIVKF 1297
>gi|84569929|gb|AAI10500.1| USP22 protein [Homo sapiens]
Length = 512
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 63 CLYCVFFGC-------FTKKHIHEHAKAKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 114
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 115 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 162
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 163 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 220
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 221 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 280
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 281 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 332
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 377 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 435
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 436 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 483
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 484 AIITKASIKDVLDSEGYLLFYHK 506
>gi|405960113|gb|EKC26060.1| Ubiquitin carboxyl-terminal hydrolase 15 [Crassostrea gigas]
Length = 923
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 86/184 (46%), Gaps = 25/184 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAET--KP 281
GL+NLGNTCF NS +Q + + +L +Y L PL + + + + E
Sbjct: 255 GLSNLGNTCFMNSAIQCMSNVPKLTNYLLGDRWKEEINEDNPLGMGGEIARSYTELIKTM 314
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + PR F + APQF GYQQ DS ELL LLDGL + +K+
Sbjct: 315 WSGKYSYTVPRYFKVQVGKFAPQFSGYQQQDSQELLAFLLDGLHEDLNRIKKKPYVEIQD 374
Query: 335 -NSPSE-------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
N+ S+ V VD F G + STV C EC S ++PF LSLP+
Sbjct: 375 SNNRSDQEVAKESWENYEKRNDSVIVD-TFHGLLKSTVNCPECTKVSVTFDPFCYLSLPM 433
Query: 387 PTKK 390
P KK
Sbjct: 434 PIKK 437
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-SEIINLRPYM-DPGCTDHDNY 971
ATK+ + P +L +HLKRFS + R K++ V F + +NL+ Y+ +P H
Sbjct: 781 ATKKFDLWSLPDVLIVHLKRFSYNRFYR-DKIDALVEFPARGLNLKKYIINP---HHGPV 836
Query: 972 DYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLR 1031
Y L+ V H G + GGHY AY KNK G WY+ D V S ++V+
Sbjct: 837 TYDLIAVSNHYGGLGGGHYTAYA----KNK-------DDGEWYYFDDSSVTSSSEDDVVS 885
Query: 1032 CEAYILFYEK 1041
AY+L Y+K
Sbjct: 886 KAAYVLVYQK 895
>gi|449437492|ref|XP_004136526.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like [Cucumis sativus]
Length = 602
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 38/190 (20%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL---NAELTF-------GPLTIA----LKK 274
+ GL NLGNTCF NS +Q L+ +L DYFL E+ + G L +A L+K
Sbjct: 3 LTGLQNLGNTCFMNSALQCLVHTPKLVDYFLGNFQKEINYDNPLGMKGELALAFGDLLRK 62
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL--------C- 325
L+A G ++V PR F + + APQF GY QHDS E L LLDGL C
Sbjct: 63 LWA-----PGSKSV-PPRMFKLKLANFAPQFSGYNQHDSQEFLSFLLDGLHEDLNRVKCK 116
Query: 326 ----SEELAFRKRNSPSE---GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEP 378
++++ R+ +E N ++ N + VD + GQ ST+ C C S ++P
Sbjct: 117 PYFEAKDVEGRRDEEVAEEYWQNHLARNDS-IIVD-LCQGQYRSTLVCPACNKLSVTFDP 174
Query: 379 FLDLSLPVPT 388
F+ LSLP+P+
Sbjct: 175 FMYLSLPLPS 184
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF--SEIINLRPYMDPGCT 966
K + A K++ + + P IL IHLKRFS +R +KL V+F ++IN Y+ +
Sbjct: 482 KKPQQARKKLDLWRLPEILVIHLKRFSY-SRFFKNKLETFVDFPIDDVIN-GLYVSQLKS 539
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y + +E +G GHY AYV G G WY D V VS
Sbjct: 540 MQIFYLFXTKFPLEGMG---AGHYTAYVLHG-------------GKWYDFDDDRVIPVSE 583
Query: 1027 EEVLRCEAYILFYEKI 1042
+ V AY+LFY++I
Sbjct: 584 DVVKSSAAYVLFYKRI 599
>gi|426349090|ref|XP_004042152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Gorilla
gorilla gorilla]
Length = 525
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 76 CLYCVFFGC-------FTKKHIHEHAKAKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 127
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 128 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 175
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 176 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 233
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 234 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 293
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 294 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 497 AIITKASIKDVLDSEGYLLFYHK 519
>gi|410051732|ref|XP_003953155.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22 [Pan troglodytes]
Length = 513
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 64 CLYCVFFGC-------FTKKHIHEHAKAKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 115
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 116 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 163
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 164 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 221
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 222 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 281
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 282 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 333
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 378 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 436
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 437 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 484
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 485 AIITKASIKDVLDSEGYLLFYHK 507
>gi|410212034|gb|JAA03236.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410262710|gb|JAA19321.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410299182|gb|JAA28191.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410356232|gb|JAA44523.1| ubiquitin specific peptidase 22 [Pan troglodytes]
Length = 525
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 76 CLYCVFFGC-------FTKKHIHEHAKAKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 127
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 128 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 175
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 176 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 233
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 234 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 293
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 294 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 497 AIITKASIKDVLDSEGYLLFYHK 519
>gi|405967141|gb|EKC32341.1| Ubiquitin carboxyl-terminal hydrolase 32 [Crassostrea gigas]
Length = 1526
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 88/186 (47%), Gaps = 35/186 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF N+ +Q + L YF+ F PL +K A+ E
Sbjct: 765 GLNNLGNTCFMNAAVQCVSNTWPLTQYFIGGLHLFELNRSNPL--GMKGHIAQRYGELVK 822
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G I P I AP+F G+QQHDS ELL LLDGL E+L R P
Sbjct: 823 DLWSGTSKTIAPLKLRWTIGKYAPRFNGFQQHDSQELLSFLLDGL-HEDLN-RVHVKPYV 880
Query: 338 ----SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLD 381
S+G N + NQ + VD +F GQ+ S VRC ECG S ++PF
Sbjct: 881 ELKDSDGREDEIVAEEAWENHLRRNQS-IIVD-LFHGQLKSQVRCKECGLLSVRFDPFNY 938
Query: 382 LSLPVP 387
LSLP+P
Sbjct: 939 LSLPLP 944
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L + H G + GGHYV Y + P K WY +D +E S+E++
Sbjct: 1433 YDLSSMSCHTGILGGGHYVCYAKN-PNQK-----------WYCYNDSSCKECSVEQMDCN 1480
Query: 1033 EAYILFYEK 1041
AYILFYE+
Sbjct: 1481 SAYILFYER 1489
>gi|388581444|gb|EIM21752.1| cysteine proteinase, partial [Wallemia sebi CBS 633.66]
Length = 454
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
+ + N +K++ + S G+ + GL NLGNTC+ NS +Q L A +F
Sbjct: 110 YPTQNTQEAVKNQQHLFKASYWHGDVTGLT-GLKNLGNTCYMNSTLQCLSATIPFARFFT 168
Query: 260 -----------NAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGY 308
N G L + ++ E I+P +F IC+ A QF G
Sbjct: 169 SGVWRRFVNHNNKMGMQGRLAESFSQILTHMWREQ--YTFISPMTFRKNICTFANQFIGT 226
Query: 309 QQHDSHELLRCLLDGLCSEELAFRKRNSPSE---GNGISSNQGP---------------- 349
QHD+ E L LLDGL E+L + P+E + + S P
Sbjct: 227 DQHDAQEFLSFLLDGL-HEDLMVGEGQKPTEDTNNDALESLPTPLGSEREWKRYKQMNDS 285
Query: 350 VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKK 390
V VDY F GQ + + C+ C +ST Y F+ LSLPVPTKK
Sbjct: 286 VIVDY-FQGQFRNRMECMSCHKTSTTYNSFMYLSLPVPTKK 325
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLS-KLNGHVNFS-EIINLRPYM----- 961
KV R + KR+ I + PPIL I LKRFS + G S K+ V + + NL PY
Sbjct: 357 KVARKSIKRLSIARLPPILLIQLKRFSFN--GPFSDKIETLVTYPLKNFNLTPYTPHMAN 414
Query: 962 --------DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVA 992
D H + Y L GV H G+++ GHY A
Sbjct: 415 QYYGITNKDDPTLQHPPFIYELYGVTNHYGSLQSGHYTA 453
>gi|150010639|ref|NP_056091.1| ubiquitin carboxyl-terminal hydrolase 22 [Homo sapiens]
gi|78103328|sp|Q9UPT9.2|UBP22_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|307684440|dbj|BAJ20260.1| ubiquitin specific peptidase 22 [synthetic construct]
Length = 525
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 76 CLYCVFFGC-------FTKKHIHEHAKAKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 127
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 128 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 175
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 176 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 233
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 234 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 293
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 294 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 497 AIITKASIKDVLDSEGYLLFYHK 519
>gi|148234990|ref|NP_001080551.1| ubiquitin specific peptidase 8 [Xenopus laevis]
gi|27697056|gb|AAH43910.1| Usp8-prov protein [Xenopus laevis]
Length = 1063
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 213 STVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELT---- 264
S + S + + G A + GL NLGNTC+ NS++Q L L +YF A++
Sbjct: 706 SKIRSLNPVFGGAGPALTGLRNLGNTCYMNSILQCLCNTPHLAEYFNKNCYQADINRSNL 765
Query: 265 ----------FGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSH 314
FG + AL TG I+P+ F I QF GY DS
Sbjct: 766 LGHKGEVAEEFGCIMKAL---------WTGQYKCISPKDFKITIGKINEQFAGYSHQDSQ 816
Query: 315 ELLRCLLDGLCSE--ELAFRKRNSPSEGNGISSNQGPVFVDY------------VFGGQI 360
ELL L+DGL + + RKR + +S +Q Y +F GQ
Sbjct: 817 ELLLFLMDGLHEDLNKADNRKRQKEENNDHLSDSQAADSAWYKHKQLNESIIVSLFQGQF 876
Query: 361 ASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKL 407
STV+C+ C S +E F+ LSLP+P+ S K + AK+ KL
Sbjct: 877 KSTVQCLTCQKKSRTFEAFMYLSLPLPSTSKCSLKDCIKAFAKEEKL 923
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 16/132 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K +R ATK++ I K PPIL +HLKRFS + R R KL +V+F E ++L PY+
Sbjct: 935 KTQRVATKKIEIWKLPPILLVHLKRFSFEGRWR-QKLQAYVDFPLESLDLSPYV---IGP 990
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+ Y L GV H G + GGHY AY + K + W+ D V ++S+
Sbjct: 991 KSSKKYNLFGVSNHYGGLDGGHYTAYCKNALKQR-----------WFKFDDHDVSDISVS 1039
Query: 1028 EVLRCEAYILFY 1039
V AY+LFY
Sbjct: 1040 SVKTSAAYMLFY 1051
>gi|194751941|ref|XP_001958282.1| GF23599 [Drosophila ananassae]
gi|190625564|gb|EDV41088.1| GF23599 [Drosophila ananassae]
Length = 1748
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 85/185 (45%), Gaps = 29/185 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF--------LNAEL---TFGPLTIALKKLFAET 279
GL NLGNTCF N+ +Q L L YF LNA T G L + +L E
Sbjct: 741 GLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFELNATNKLGTRGQLAMRYAELLKEV 800
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL------CSEELAFRK 333
T + P C+ APQF G QHDS ELL LLD L +E+
Sbjct: 801 W--TATTRSVAPLKLRFCVNKHAPQFAGGGQHDSQELLEWLLDALHEDLNRVTEKPYSEL 858
Query: 334 RNSPSEGNGISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
++S + I + + + +D +F GQ+ S V C+ CGH S ++PF LSL
Sbjct: 859 KDSNGRPDKIVAAEAWSQHHARNQSIIID-LFYGQLKSKVSCLGCGHESVRFDPFSLLSL 917
Query: 385 PVPTK 389
P+P +
Sbjct: 918 PLPVE 922
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 969 DNYD--YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
D +D YRL VV H G + GGHY++Y + G WY +D RE+S
Sbjct: 1644 DEFDPKYRLYAVVSHSGMLNGGHYISYA------------SNASGSWYCYNDSSCREISQ 1691
Query: 1027 EEVLR-CEAYILFYEK 1041
+ ++ AY+LFYE+
Sbjct: 1692 KPMIDPSAAYLLFYER 1707
>gi|417405916|gb|JAA49648.1| Putative ubiquitin carboxyl-terminal hydrolase 8 [Desmodus
rotundus]
Length = 1116
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 93/212 (43%), Gaps = 41/212 (19%)
Query: 210 KSESTVVSGSDLD------GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----- 258
K+E T +S S + G + + GL NLGNTC+ NS++Q L L DYF
Sbjct: 749 KAEITRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCY 808
Query: 259 ---LNAELTFG-------PLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGY 308
+N G I +K L+ TG I+P+ F I QF GY
Sbjct: 809 QDDINRSNLLGHKGEVAEEFGIIMKALW------TGQYRYISPKDFKTTIGKINDQFAGY 862
Query: 309 QQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEGNGISSNQGPVF------------VDY 354
Q DS ELL L+DGL + + RKR+ + + + + +
Sbjct: 863 SQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVA 922
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+F GQ STV+C+ C S +E F+ LSLP+
Sbjct: 923 LFQGQFKSTVQCLTCHKRSRTFEAFMYLSLPL 954
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
+ +RD+ K++ I K PP+L +HLKRFS D R + KL V+F E ++L Y+ +
Sbjct: 987 RARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWK-QKLQTSVDFPLENLDLSQYVIGPKNN 1045
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y+ L V H G + GGHY AY + + + W+ D V ++S+
Sbjct: 1046 LKKYN--LFSVSNHYGGLDGGHYTAYCKNAARQR-----------WFKFDDHEVSDISVS 1092
Query: 1028 EVLRCEAYILFY 1039
V AYILFY
Sbjct: 1093 SVKSSAAYILFY 1104
>gi|395538233|ref|XP_003771089.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Sarcophilus
harrisii]
Length = 717
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 26/156 (16%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
C+ +K + +SK V + +A K++++ + P +L +HLKRF R K+ HV F
Sbjct: 540 CDQCNTKRRKFSSKPV-ILTEAQKQLMVCRLPQVLRLHLKRFRWSGRNHREKIGVHVGFD 598
Query: 953 EIINLRPY--------MDPGCTDHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVK 1003
EI+N+ PY + P C + Y L VV H G G GHY AY
Sbjct: 599 EILNMEPYCYRESLKSLRPEC-----FIYDLSAVVMHHGKGFGSGHYTAYCYN------- 646
Query: 1004 AKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
S GG W H +D + +LEEV + +AYILFY
Sbjct: 647 ----SEGGFWVHCNDSKLNMCTLEEVCKAQAYILFY 678
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+G +++P + + P F+GY Q D+ E L LLD + EL P+
Sbjct: 396 SGKWALVSPFAMLHSVWRLIPAFRGYAQQDAQEFLCELLDKV-QHELETTGTRYPAL--- 451
Query: 343 ISSNQGPVF------VDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
I S+Q + V+ +F GQ+ S V C+ C + S EPF DLSL P +
Sbjct: 452 IPSSQKKLIKQVLNVVNTIFHGQLLSQVTCLACDNKSNTVEPFWDLSLEFPER 504
>gi|327412316|ref|NP_001192175.1| ubiquitin specific peptidase 22 [Xenopus (Silurana) tropicalis]
Length = 572
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 125/306 (40%), Gaps = 36/306 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E+
Sbjct: 108 CLYCVFFGC-------FTKKHIHEHAKNKRHNLAIDLLYGGI-YCFMCQDYIYDKDMEQV 159
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSE-IKSESTVVSGS----DLDGN 224
K+ + KL +S G E K E ++ + + N
Sbjct: 160 A--KEEQRKAWKLQAFSPALVSPYQYAMTGVGEKYSTWEPTKRELELLQHNPKRRKITTN 217
Query: 225 ACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTFGP---LTIALKKLFA 277
+RGL NLGNTCF N ++Q L L+D+FL+ E+ P L + LF
Sbjct: 218 CTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQ-SPNSCLVCEMSTLFQ 276
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKR 334
E +G R+ P + + A GY+Q D+HE L LD L C + +K
Sbjct: 277 EF--YSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKA 334
Query: 335 NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSK 394
N+P+ N I +D +F G + S V C C ST +PF D+SL +P P
Sbjct: 335 NNPNHCNCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFW 386
Query: 395 KTQPAS 400
P S
Sbjct: 387 PLSPGS 392
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 437 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPWELDMTPFMASSKESRMNG 495
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + H++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 496 QYQQPSDSLHNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 543
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 544 AIITKASIKDVLDSEGYLLFYHK 566
>gi|226487496|emb|CAX74618.1| ubiquitin thiolesterase [Schistosoma japonicum]
Length = 933
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 87/186 (46%), Gaps = 33/186 (17%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-------GPLTIALKKLFA 277
V GL NLGNTCF NS +Q + + L YFL+ +EL G + IA L
Sbjct: 275 VCGLNNLGNTCFMNSALQCMSNVPALTSYFLSGKWKSELNIRNPLGSQGRIAIAYADLIK 334
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
+ +G R PR F I A QF GY QHD+HELL LLDGL E+L R + P
Sbjct: 335 QLW--SGTRAYAVPREFKIEIARIARQFSGYAQHDTHELLVFLLDGL-HEDLN-RIHSKP 390
Query: 338 ------SEG-----------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
S+G S + VD +F GQ+ STV C C S ++PF
Sbjct: 391 YIEVKDSDGRPDIEVANEAWQYYKSRNDSIIVD-LFHGQLKSTVICPTCQRKSVTFDPFA 449
Query: 381 DLSLPV 386
L LP+
Sbjct: 450 SLILPI 455
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 881 VYQSDSQLVAGNCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRF 934
V + + L +C + VE++ S+ + K ++ ATK+ + K P +L + LKRF
Sbjct: 710 VTRLNQTLQLSDCFERFTDVEQLGSRDLWYCNRCKAEKPATKKFDLWKLPDVLVVQLKRF 769
Query: 935 SQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAY 993
R K++ + F +NL + D + + Y LV V H+G + GGHY A+
Sbjct: 770 RSHLRFH-DKIDTLLEFPLTGLNLTSRVLEKKPD-EKFIYDLVAVSNHMGYLGGGHYTAF 827
Query: 994 VRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
N +WY D RE +++ AY+L Y
Sbjct: 828 ALNAQTN-----------LWYFFDDSSTRECDPSKIVTSSAYVLVY 862
>gi|226487492|emb|CAX74616.1| ubiquitin thiolesterase [Schistosoma japonicum]
gi|226487494|emb|CAX74617.1| ubiquitin thiolesterase [Schistosoma japonicum]
Length = 919
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 87/186 (46%), Gaps = 33/186 (17%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-------GPLTIALKKLFA 277
V GL NLGNTCF NS +Q + + L YFL+ +EL G + IA L
Sbjct: 261 VCGLNNLGNTCFMNSALQCMSNVPALTSYFLSGKWKSELNIRNPLGSQGRIAIAYADLIK 320
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP 337
+ +G R PR F I A QF GY QHD+HELL LLDGL E+L R + P
Sbjct: 321 QLW--SGTRAYAVPREFKIEIARIARQFSGYAQHDTHELLVFLLDGL-HEDLN-RIHSKP 376
Query: 338 ------SEG-----------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
S+G S + VD +F GQ+ STV C C S ++PF
Sbjct: 377 YIEVKDSDGRPDIEVANEAWQYYKSRNDSIIVD-LFHGQLKSTVICPTCQRKSVTFDPFA 435
Query: 381 DLSLPV 386
L LP+
Sbjct: 436 SLILPI 441
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 881 VYQSDSQLVAGNCESEESKVEEINSKIV------KVKRDATKRVLINKAPPILTIHLKRF 934
V + + L +C + VE++ S+ + K ++ ATK+ + K P +L + LKRF
Sbjct: 696 VTRLNQTLQLSDCFERFTDVEQLGSRDLWYCNRCKAEKPATKKFDLWKLPDVLVVQLKRF 755
Query: 935 SQDARGRLSKLNGHVNFSEI-INLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAY 993
R K++ + F +NL + D + + Y LV V H+G + GGHY A+
Sbjct: 756 RSHLRFH-DKIDTLLEFPLTGLNLTSRVLEKKPD-EKFIYDLVAVSNHMGYLGGGHYTAF 813
Query: 994 VRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
N +WY D RE +++ AY+L Y
Sbjct: 814 ALNAQTN-----------LWYFFDDSSTRECDPSKIVTSSAYVLVY 848
>gi|344234824|gb|EGV66692.1| hypothetical protein CANTEDRAFT_117870 [Candida tenuis ATCC 10573]
Length = 1163
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 90/199 (45%), Gaps = 43/199 (21%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL------------------NAELTFGPLTIAL 272
GL NLGNTC+ NS +Q L+ + ++ YF N +FG L L
Sbjct: 308 GLINLGNTCYMNSALQCLVHVPEINYYFFFDLFMKELNKTNPLGYNGNMAQSFGSL---L 364
Query: 273 KKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE----- 327
KLF++ N ++PR F I + F+GYQQ DS E L LLD L +
Sbjct: 365 HKLFSDQSVNGTSLNALSPREFKYTIGHYSSMFQGYQQQDSQEFLSWLLDSLHEDLNRIH 424
Query: 328 --------ELAFRKRNSPSEGN---GISSNQ-----GPVFVDYVFGGQIASTVRCVECGH 371
EL ++P IS +Q V VD +F G S + C +CG
Sbjct: 425 DKPYLEKPELKDEDIDNPEAIKRLADISWDQYKKRNDSVIVD-LFSGLYQSVLVCPDCGK 483
Query: 372 SSTVYEPFLDLSLPVPTKK 390
+S Y+PF DL+LP+P +K
Sbjct: 484 TSITYDPFNDLTLPLPIEK 502
>gi|342319397|gb|EGU11346.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 1438
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----NAEL-------TFGPLTIALKKLFAET 279
GL NLGNTCF NS +Q + +LQ+YFL ++EL G + A +L
Sbjct: 479 GLQNLGNTCFMNSAIQCMSNTKELQEYFLSGVYHSELNRENPLGMRGQVAEAFGQLIERL 538
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPS- 338
TG + + PR F + APQF GY Q DS ELL LLDG + E R + P+
Sbjct: 539 WNGTG--SSVAPREFKQALARFAPQFSGYGQQDSQELLAFLLDG--THEDLNRIKKKPAT 594
Query: 339 -----EGNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPF 379
EG G S V VD +F GQ STV C +C S ++PF
Sbjct: 595 EAPDWEGGGDKEMVELAKTCWEQYRSRNDSVIVD-LFQGQYRSTVVCPDCDKVSITFDPF 653
Query: 380 LDLSLPVPTKK 390
+ ++ +P K
Sbjct: 654 MYVTTNLPVTK 664
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 861 QDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIV------KVKRDA 914
QD ++ G A+KV + +C +E +K E + + K + A
Sbjct: 1070 QDIVDPAITARQQQGKGAKKV------ITLSDCLTEFTKEERLGEDDMWYCSRCKEFKQA 1123
Query: 915 TKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEI--INLRPYMD---------- 962
TK+V + K P +L LKRFS R K++ V+F + +++ ++
Sbjct: 1124 TKKVELWKVPDVLVFALKRFSS-GRWSREKIDDLVDFPVLDGLDMEQFVQGDKVEQRLAQ 1182
Query: 963 -----PGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHAS 1017
P ++ D+ Y L V H G + GGHY A+ + P+N G WY
Sbjct: 1183 QMPDAPAISEPDSLVYDLYAVSNHFGGLGGGHYTAFAK-NPEN----------GKWYDFD 1231
Query: 1018 DVYVREVSLEEVLRCEAYILFYEK 1041
D V E++ E V AY+LFY +
Sbjct: 1232 DSRVTEINPERVKSSAAYLLFYRR 1255
>gi|390481017|ref|XP_003736056.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22-like [Callithrix jacchus]
Length = 697
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 121/302 (40%), Gaps = 43/302 (14%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTE-- 167
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 248 CLYCVFFGC-------FTKKHIHEHAKSKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 299
Query: 168 ENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACY 227
E + A ++G + S+ + E++ + N
Sbjct: 300 AKEEQRKAWK-----MQGAGEKFSTWE---------PTKRELELLKHNPKRRKITSNCTI 345
Query: 228 VVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKP 281
+RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E
Sbjct: 346 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY- 404
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPS 338
+G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 405 -SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPN 463
Query: 339 EGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQP 398
N I +D +F G + S V C C ST +PF D+SL +P P P
Sbjct: 464 HCNCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSP 515
Query: 399 AS 400
S
Sbjct: 516 GS 517
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 562 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 620
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R + K + W+ D
Sbjct: 621 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIR-------QHKDQ-----WFKCDD 668
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 669 AIITKASIKDVLDSEGYLLFYHK 691
>gi|291414911|ref|XP_002723699.1| PREDICTED: ubiquitin thiolesterase 22 [Oryctolagus cuniculus]
Length = 529
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 76 CLYCVFFGC-------FTKKHIHEHAKSKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEVI 127
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 128 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 175
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 176 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEF--YS 233
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 234 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 293
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 294 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGCSTPFWPLSPGS 345
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 26/132 (19%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVL 1030
+ + S+++VL
Sbjct: 497 AIITKASIKDVL 508
>gi|195426425|ref|XP_002061335.1| GK20778 [Drosophila willistoni]
gi|194157420|gb|EDW72321.1| GK20778 [Drosophila willistoni]
Length = 917
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDN 970
R K + P +L IHLKRF D SK++ HV F E ++ PY+D C
Sbjct: 393 RTGIKYSRVLNLPEVLCIHLKRFRHDL-SYSSKISSHVYFPLEGFDMHPYVDKNCQSQ-V 450
Query: 971 YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVL 1030
Y Y L V+ H GT+ GGHY Y R S+ G WY D +V EV E V
Sbjct: 451 YSYNLSSVICHHGTVGGGHYTCYARN-----------SLNGRWYEFDDQFVTEVLPEVVQ 499
Query: 1031 RCEAYILFYEK 1041
C+AY+LFY+K
Sbjct: 500 NCQAYVLFYQK 510
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 22/115 (19%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPLT-------------IALKKLFA 277
GL NL NTC+ NS +Q L ++ + YF+N G L + L K +
Sbjct: 77 GLQNLANTCYMNSALQALSNLNPMTHYFINC----GDLVEHIADQSSSRCKPVGLAKNYQ 132
Query: 278 ETKPETGL-----RNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE 327
+ L + I PR I S P F+GYQQHD+ E LRC +D L E
Sbjct: 133 RLMQDIWLNIDDPKEFIAPRGILYGIRSVHPMFRGYQQHDTQEFLRCFMDQLHEE 187
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 355 VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
VF G++ S+V+C+ C ST E F DLSLP+PT+
Sbjct: 286 VFDGKLLSSVQCLTCDRISTREETFQDLSLPIPTR 320
>gi|356543638|ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
max]
Length = 874
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 95/195 (48%), Gaps = 48/195 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL---------------NAE--LTFGPLTIA 271
+ GL NLGNTCF NS +Q L +L DYFL N E L FG L
Sbjct: 278 LTGLQNLGNTCFMNSSLQCLAHTPKLVDYFLEDYIREINHDNPLGMNGEIALAFGDL--- 334
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+KL+A + ++PR F + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 335 LRKLWAPGA------SPVSPRIFKSKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN- 386
Query: 332 RKRNSP----SEGNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R + P +G+G ++ N V VD V GQ ST+ C C S
Sbjct: 387 RVKCKPYIEVKDGDGRRDEEVADEYWHNHLARNDS-VIVD-VCQGQYKSTLVCPVCRKVS 444
Query: 374 TVYEPFLDLSLPVPT 388
++PF+ LSLP+P+
Sbjct: 445 VTFDPFMYLSLPLPS 459
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 16/134 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A+K++ + + P IL IHLKRF Q +R +KL +V+F + ++L Y+ G +
Sbjct: 750 KEHRQASKKLDLWRLPEILVIHLKRF-QYSRYLKNKLETYVDFPVDNLDLSAYITYG--N 806
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++Y Y L V H G+M GGHY A+V G G WY D +V +S E
Sbjct: 807 DESYHYTLYAVSNHYGSMGGGHYTAFVHRG------------GDQWYDFDDSHVNPISKE 854
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY +
Sbjct: 855 KIKSSAAYVLFYRR 868
>gi|410980119|ref|XP_003996426.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Felis catus]
Length = 470
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 21 CLHCVFFGC-------FTKKHIHEHAKSKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 72
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 73 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 120
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 121 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 178
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 179 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 238
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 239 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 290
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 335 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 393
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 394 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 441
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+E+VL E Y+LFY K
Sbjct: 442 AIITKASIEDVLDSEGYLLFYHK 464
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,758,153,666
Number of Sequences: 23463169
Number of extensions: 748507793
Number of successful extensions: 1845674
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2469
Number of HSP's successfully gapped in prelim test: 6339
Number of HSP's that attempted gapping in prelim test: 1786814
Number of HSP's gapped (non-prelim): 34295
length of query: 1042
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 889
effective length of database: 8,769,330,510
effective search space: 7795934823390
effective search space used: 7795934823390
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 82 (36.2 bits)