BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001625
(1042 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W4N3|UBP2_ARATH Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana
GN=UBP2 PE=1 SV=2
Length = 961
Score = 570 bits (1469), Expect = e-161, Method: Compositional matrix adjust.
Identities = 356/750 (47%), Positives = 457/750 (60%), Gaps = 84/750 (11%)
Query: 41 VPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSS 100
V +KE + C H DK ++ +K+ KI SS I+C +C EGV +RG K KG GKK SS
Sbjct: 41 VKAVKETQACVHFDKALNLEKVLDKIKSSRQIKCAECNEGVYGKRGTKAKGSKGKKDFSS 100
Query: 101 ---LVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPC 157
++KAIW+CL CG Y CGGVGLP PQSHV+RH+R TRH LVIQWENP LRWCFPC
Sbjct: 101 SDPKSNNKAIWLCLECGCYVCGGVGLPNGPQSHVLRHSRVTRHRLVIQWENPQLRWCFPC 160
Query: 158 NTLIPVEKTEENGENKDALSEVVKLIKGRS-TEISSVDVEDAWFGSGNVNSEIKSESTVV 216
L+PVEK E+NGE KD LSEVVKLIKGRS ++S D+ED GSG++ S+IK E V
Sbjct: 161 QLLLPVEK-EDNGEKKDVLSEVVKLIKGRSLNNLASSDIEDQCSGSGSITSDIKLEGAVT 219
Query: 217 SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL--NAELTFGPLTIALKK 274
SD++ YVVRGL NLGNTCFFNS+MQNLL++ +L+D+FL N GPL +L+K
Sbjct: 220 --SDIEARDGYVVRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLKENGSGVGGPLASSLRK 277
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
LF ETKPE GL++VINPR+FFG CSKAPQF+GY QHDSHELLRCLLD L +EE A RK+
Sbjct: 278 LFTETKPEAGLKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKK 337
Query: 335 NSPSEGNGISSN--QGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
G+S N + ++ VFGG+ +S V C+ECGHSS VYEPFLDLSLPVP KK+P
Sbjct: 338 ------RGVSDNDEKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSLPVPFKKSP 391
Query: 393 SKKTQPASRAKKTKLPPKKSGRIRAKGTKDTHAVTTQSISNLSISSKSQSLT-------E 445
KK QP SRAKK KLPPK+ + +K +K + + +S L+ S KS ++T
Sbjct: 392 PKKPQPVSRAKKAKLPPKRVPKNVSKVSKVSKVLPGMVLSELNSSGKSMAVTADSDTSCS 451
Query: 446 STAPLSENVVSSSGGSQLLDSVGSPTVATQCGSALQNVPADPLPQHDQVIDIPVEQTVAS 505
S APL V + +P+V T L N A Q+
Sbjct: 452 SLAPLDNGPV-----------LETPSVLT-----LDNNQASE----------SASQSDTG 485
Query: 506 LDDFWLDYIEPQTTGDVLDSTWQKSDVSVIQDSTDFAWLDYI--EPETISDEH----GLT 559
D WLD+I P+T+GD + Q+ + D+ A ++ I P +++ T
Sbjct: 486 FDGSWLDFIGPETSGDETNLDMQEDGI----DNVITAEVNQIVPSPNIVANSSVSSGDQT 541
Query: 560 LENNDVLFVQDSGE-----------------QDEVSDDSLINS--NQIPLLDSKPNLKAD 600
LE N +QD E DE S I++ +Q + P +
Sbjct: 542 LEGNTERLMQDYEEIAKAEANLDEKDVQAMQSDECPATSGISAEFSQASCIGCDPGIGES 601
Query: 601 SSSGDA-GEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQE--EVDFD 657
SSS + E+ELPLVV DS+++ +PY +EIS + + GE EASSS V E DF
Sbjct: 602 SSSVNPWDEEELPLVVADSQILYMPY-KEISCNDKSVEGECEASSSFVTGDHEPQNSDFV 660
Query: 658 GFGDLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFI 717
FG LF+EPET GPV P S E+ G GF + SS+SDP+E+DDSD PVSVE CL HF
Sbjct: 661 DFGGLFDEPETTEGPVFGPPSKAEASGVGF-MAFSSESDPEEIDDSDLPVSVERCLGHFT 719
Query: 718 KPELLTDDNAWDCESCSKTLQRQKLEALKR 747
K E+L+DDNAW+CE+CSK L+ Q+L ++
Sbjct: 720 KHEILSDDNAWNCENCSKNLKLQRLREKRK 749
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 129/183 (70%), Gaps = 9/183 (4%)
Query: 860 DQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVL 919
D ++ SC V +S G A +++ +D G + +E + K++ VKRDATK+VL
Sbjct: 784 DPNDTSC-VKDHSSDGRKAARIHSADESESKGTQDEDED-----SEKVITVKRDATKKVL 837
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVV 979
INKAPP+LTIHLKRFSQD RGRLSKLNGHV F E+I+LR YMD C+ D YRL G+V
Sbjct: 838 INKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLV 897
Query: 980 EHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
EH GTMRGGHYVAYVRGG + K + +S WY+ SD YVR+VSLE+VL EAYILFY
Sbjct: 898 EHSGTMRGGHYVAYVRGGQRVK---ETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFY 954
Query: 1040 EKI 1042
E+I
Sbjct: 955 ERI 957
>sp|Q9FPT5|UBP1_ARATH Ubiquitin carboxyl-terminal hydrolase 1 OS=Arabidopsis thaliana
GN=UBP1 PE=1 SV=2
Length = 1083
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 278/742 (37%), Positives = 384/742 (51%), Gaps = 105/742 (14%)
Query: 29 QQSKPVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKK 88
Q + VE T++ M E++ C H DK +D DK+ I S I+C +C E V +RG +
Sbjct: 11 QSEQSVEVTEEFAVTMTEKRSCVHFDKYVDLDKLLKIIKSYQQIKCGECNERVHVKRGSR 70
Query: 89 GKGKHGKKKGSSLVDSK----AIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVI 144
G ++ S D AIW+CL CG+Y CG VGLPT QSHV+ H R TRH LVI
Sbjct: 71 W-GASNRRDWYSSSDQNCARNAIWLCLECGYYVCGDVGLPTEAQSHVMGHNRLTRHRLVI 129
Query: 145 QWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGN 204
Q +NP LRWCF C +L+P + EENGE KD L EVVKLI+ RS S E + SG+
Sbjct: 130 QCKNPQLRWCFSCQSLLPFD-NEENGEKKDLLLEVVKLIRERSPNTYSASFETEFSCSGS 188
Query: 205 VNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELT 264
+ I++ DG Y VRGL NLGNTCFFNSVMQNLL++ QL+++FL +L+
Sbjct: 189 IYGGIEAR---------DG---YAVRGLVNLGNTCFFNSVMQNLLSLDQLREHFLKEDLS 236
Query: 265 F-GPLTIALKKLFAETKPETG-LRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLD 322
GPL +LK+LFAE+ E RN INPR F +CS+APQF+GYQQHDSHELLRCLLD
Sbjct: 237 VSGPLVSSLKELFAESNSEASVFRNEINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLD 296
Query: 323 GLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
GL EE + RK+ S+ N S+ Q P +D VFGG+I+STV C+ECGH S VYEPF+DL
Sbjct: 297 GLSIEESSLRKKLGVSDSNDSSTYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEPFMDL 356
Query: 383 SLPVPTKKAPSKKTQPASRAK---KTKLPPKKSGRIRAKGTKD----------------- 422
SLPVP+ K P KK Q S+AK K K S + AK D
Sbjct: 357 SLPVPSMKLPPKKQQILSQAKEVLKNGAVSKDSEVVSAKPASDHNSTVPLFPSDHKIQSR 416
Query: 423 -------THAVTTQSISNLSISSKSQSL-----------------TESTAPLSENV---- 454
T V +S+ + S++++ + T T P E+V
Sbjct: 417 PETSDNETDLVLLSDVSDTAPSTEAKGVNQILVGSTETLMHDNDRTGKTVPDKEDVRATQ 476
Query: 455 ----VSSSGGSQLLDSV---GSPTVATQCGSALQNVPAD--PLPQHDQVIDIPVEQTVAS 505
S+SG S ++D G P + SA Q + + QV+ +P + +
Sbjct: 477 SNEETSASGISAVIDEAQVCGCPDLEQSSSSANQGADEELALMVADSQVLYMPYKDHL-- 534
Query: 506 LDDFWLDYIEPQTTGDVLDSTWQKSDVSVIQDSTDF-AWLDYIEPETISDEHGLTLENND 564
F+ DY+ + + S++ D +D DF ++LD EPE L ++
Sbjct: 535 ---FYDDYMVAEAS-----SSFVSGDHEPKKDYFDFSSFLD--EPEIREGPVFRPLSKSE 584
Query: 565 VLFVQDSGEQDEVSDDSLIN------SNQIPLLDSKPNLKADSSSGDAGEDEL---PLV- 614
V ++G + + SDD ++ S+ D + N+ S E E+ P
Sbjct: 585 VY---EAGFKADCSDDKTVSAGKGEASSSFISSDHEQNIDYVDFSSFFDEPEISERPFFR 641
Query: 615 -VQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQEE-VDFDGFGDLFNEPETAIGP 672
+ SEV + + S +G+GEASSS V E+ +D+ F F+EPE + P
Sbjct: 642 PLSKSEVSEAGFKADCSDDKTVSAGKGEASSSFVSSDHEQNIDYVDFSSFFDEPEISERP 701
Query: 673 VPRPSSGTESVGSGFVVGNSSD 694
RP S +E +GF+ + +D
Sbjct: 702 FFRPLSKSEVSEAGFMAVSGND 723
Score = 256 bits (653), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 168/411 (40%), Positives = 227/411 (55%), Gaps = 60/411 (14%)
Query: 637 SGEGEASSSVV-GCRQEEVDFDGFGD-LFNEPETAIGPVPRPSSGTESVGSGFVVGNSSD 694
+G+GE SS + G + +D+ F + +F++ T+ PV P S + +GFV SSD
Sbjct: 728 AGKGETFSSFMSGDNERNIDYVEFTNRIFDDRGTSERPVFGPPSKAKVSEAGFV-AVSSD 786
Query: 695 SDPDEVDDSDSPVSVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEALKRRAK--LA 752
SDP +D+SDSPVSV+ CL F K E+L++DNAW CE+CSK L+ Q+L KRR K L+
Sbjct: 787 SDPAVLDESDSPVSVDRCLAQFTKHEILSEDNAWHCENCSKNLKLQRLRE-KRRTKEGLS 845
Query: 753 SKPLINGGETSNQNDIQGSSLTDVDSLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCA 812
++ + G +S ++ + SSL NQ C
Sbjct: 846 NRWVNENGASSAFDECRDSSL----------------------------------NQSCI 871
Query: 813 EVESGLTNDVNPAVPQREKGKMKINDAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGAT 872
++E+G K I + S + D E T Q + +
Sbjct: 872 DLENGY------------KAAPPITKLPNCKEEESAIDDGFVGEENTKQAPITSVTETPL 919
Query: 873 SSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLK 932
G + SD++ CE+ E ++S+ V VKRDA K+VLINKAPP+LTIHLK
Sbjct: 920 LGGETISSQPASDNE-----CENWEDLA--VDSEEVIVKRDARKKVLINKAPPVLTIHLK 972
Query: 933 RFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVA 992
RFSQDARGR+SKL+GHV+F E I+L YMD C++ D YRL G+VEHLG M GHYV+
Sbjct: 973 RFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVYRLAGLVEHLGAMSRGHYVS 1032
Query: 993 YVRGGPKNKVKA-KKESVGGVWYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
Y+RGG K + + KE +WYHASD VR SLEEVLR EAYILFYE+I
Sbjct: 1033 YIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEVLRSEAYILFYERI 1083
>sp|Q0VA64|UBP16_XENTR Ubiquitin carboxyl-terminal hydrolase 16 OS=Xenopus tropicalis
GN=usp16 PE=2 SV=1
Length = 864
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 193/428 (45%), Gaps = 95/428 (22%)
Query: 33 PVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGK 92
P + + D PV C HL K +D + + + + C++C + K
Sbjct: 10 PAQDSLDAEPV------CKHLRKALDEGSVKKALVNVEWTVCQEC----------QADNK 53
Query: 93 HGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVI---QW 146
LV+ ++W+CL CGH CG + H + H R H LV+ W
Sbjct: 54 EKNNSDDELVEDPSVWLCLKCGHRGCGR----NSASQHALNHYNTPRSEPHCLVLSMDMW 109
Query: 147 ENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVN 206
WC+ C+ +P ++ G+ D L K K +ST+ +++D E V
Sbjct: 110 S----AWCYLCDNEVPYNRSSRLGQLVDYLQRKAK-AKSKSTDSAALDEE--------VK 156
Query: 207 SEIKSESTVV----------------SGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLA 250
+EI +E+ V + S + + V+GL+NLGNTCFFN+VMQNL
Sbjct: 157 AEIVAENEVKIEDQEEKPKGQAKWDKASSTQNNSTEPTVKGLSNLGNTCFFNAVMQNLSQ 216
Query: 251 MSQLQDYF--------------------LNAELTF----GPLTIALKKLFAETKPETGLR 286
+++ N E+ GPLT+A+ + E + ET +
Sbjct: 217 TPAVRELLNEAKTLKKPVTVPLPDSSSPTNVEVHLEQQPGPLTLAMWQFLTEMQ-ETK-K 274
Query: 287 NVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEE-----LAFRK--RNSPSE 339
V+ P+ F +C KA +FKGYQQ DS ELLR LLDG+ EE LA K +N+ E
Sbjct: 275 GVVTPKEVFSQVCKKAIRFKGYQQQDSQELLRYLLDGMRGEEIQRVSLAMSKSLQNTLDE 334
Query: 340 -------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
+ P FVD++FGG++ ST+ C EC S V+EPFLDLSLPV
Sbjct: 335 EEIKKIVKDSEKRRTIPNFVDHLFGGELTSTIMCEECHTVSLVHEPFLDLSLPVLDDVIV 394
Query: 393 SKKTQPAS 400
K +Q +S
Sbjct: 395 KKNSQKSS 402
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++L++ PILT+HLKRF Q+ L K+N H+ F E+++L P+ C +
Sbjct: 716 VYTNAKKQMLVSDPSPILTLHLKRFQQNGFN-LRKINRHIKFPEVLDLAPFCTSKCKNIP 774
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG------------GVW 1013
Y L GV+EH G+MR GHY A+V+ N+ + G G W
Sbjct: 775 AGESRLLYSLYGVIEHSGSMRSGHYTAFVKLRRPNQQLCEMVLKGVIPEVSGSEPGQGSW 834
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
YH SD +V+ VSL VL +AY+LFYE++
Sbjct: 835 YHISDSHVQAVSLSRVLSSQAYLLFYERM 863
>sp|Q6PAW2|UBP16_XENLA Ubiquitin carboxyl-terminal hydrolase 16 OS=Xenopus laevis GN=usp16
PE=2 SV=1
Length = 901
Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 190/425 (44%), Gaps = 87/425 (20%)
Query: 33 PVESTDDGVPVMKERKPCPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGK 92
P + D PV C HL K +D + + + + C+DC+ K K
Sbjct: 10 PAQDFLDAEPV------CKHLRKALDDGSVKRALVNVEWTMCQDCQ--------ADNKEK 55
Query: 93 HGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVI---QW 146
+ + S+ + ++W+CL CGH CG + H + H R H LV+ W
Sbjct: 56 NNSEDESA--EDPSVWLCLKCGHRGCGRNSVA----QHALNHYNTPRSEPHCLVLNVDMW 109
Query: 147 ENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLI-KGRSTEISSVDVEDAWFGSGNV 205
WC+ C+ +P +T G+ D L K K ++ +S+ +V+ V
Sbjct: 110 S----AWCYLCDNEVPYNRTSRLGQLVDYLQRKAKAKNKNSNSVVSNEEVKTEIVTENEV 165
Query: 206 NS-EIKSESTVVSGSDLDGNACY------VVRGLANLGNTCFFNSVMQNLL---AMSQLQ 255
+ + E V ++ V+GL+NLGNTCFFN+VMQNL A+S+L
Sbjct: 166 KKIQYQDEKPDVQAKQEKASSTQKISTEPTVKGLSNLGNTCFFNAVMQNLSQTPALSELL 225
Query: 256 DYF---------------------LNAELTFGPLTIALKKLFAETKPETGLRNVINPRSF 294
+ +N E GPLT+A+ + E ET + V+ P+
Sbjct: 226 NEVKTFRKPVTVLLPDSSSPKILEVNLEQQPGPLTLAMWQFLTEMH-ETK-KGVVTPKEL 283
Query: 295 FGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQG------ 348
F +C KA +FKGYQQ DS ELLR LLDG+ EE+ +R + + + S
Sbjct: 284 FSQVCKKAIRFKGYQQQDSQELLRYLLDGMRGEEI---QRVTLAMSKSLQSTLDEEEIKK 340
Query: 349 -----------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV---PTKKAPSK 394
P FVD +FGG++ ST+ C EC S V+EPFLDLSLPV K SK
Sbjct: 341 IVKDYEKRRTIPNFVDCLFGGELTSTIMCEECHTVSLVHEPFLDLSLPVLDDLIVKKNSK 400
Query: 395 KTQPA 399
T PA
Sbjct: 401 STPPA 405
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++L++ PILT+HLKRF Q+ L K+N H+ F E+++L P+ C +
Sbjct: 753 VYTNAKKQMLVSNPSPILTLHLKRFQQNGFN-LRKINRHIKFPEVLDLAPFCTAKCKNVP 811
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG------------GVW 1013
Y L GV+EH G+MR GHY A+V+ N+ K G G W
Sbjct: 812 EGESRLLYSLYGVIEHSGSMRSGHYTAFVKLRHPNQQLCKMLFTGVIPEVSGSEPGQGSW 871
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
YH SD +V+ VSL VL +AY+LFYE++
Sbjct: 872 YHISDSHVQAVSLSRVLSSQAYLLFYERM 900
>sp|Q2KJ09|UBP16_RAT Ubiquitin carboxyl-terminal hydrolase 16 OS=Rattus norvegicus
GN=Usp16 PE=2 SV=2
Length = 826
Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 177/383 (46%), Gaps = 64/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + + C+DC+ K K + ++W+
Sbjct: 24 CRHLRKGLEQGNLKKALVNVEWNICQDCK-----------TDNKVKDKSEEEAEDPSVWL 72
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ I +
Sbjct: 73 CLKCGHQGCGR----DSQEQHALKHYTTPRSEPHYLVLSLDNWSV-WCYKCDEEIKYCSS 127
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
G+ D + + I + E ++ +++E+ S N KSES LD
Sbjct: 128 NRLGQVVDYVRKQAGRITSKPAEKNNGHIELENKKLEKESKNEQEREKSESMAKENIPLD 187
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 188 SASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 247
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 248 VNLEPPGPLTLAMSQFLNEMQENK--KRIVTPKELFSQVCKKATRFKGYQQQDSQELLRY 305
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 306 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEEVKNKVKDYEKKKAIPSFVDRIFGGELTST 365
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 366 IMCDDCRTVSLVHESFLDLSLPV 388
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++L++ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 VYTNAKKQMLVSLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 736
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP-----KNKV-------KAKKESVGGVW 1013
+ Y L GVVEH GTMR GHY AY + N V + ES G W
Sbjct: 737 EESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQW 796
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V + +VL +AY+LFYE+I
Sbjct: 797 FHISDTHVQAVPITKVLNSQAYLLFYERI 825
>sp|Q99LG0|UBP16_MOUSE Ubiquitin carboxyl-terminal hydrolase 16 OS=Mus musculus GN=Usp16
PE=1 SV=1
Length = 825
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 179/383 (46%), Gaps = 64/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C HL KG++ + + + + C+DC+ K K + ++W+
Sbjct: 24 CRHLRKGLEQGNLKKALVNVEWNICQDCK-----------TDNKVKDKPEEEAEDPSVWL 72
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 73 CLKCGHQGCGR----DSQEQHALKHYTTPRSEPHYLVLSLDNWSV-WCYKCDEEVKYCSS 127
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
G+ D + + + + E ++ +++E+ S N + KSE+ +D
Sbjct: 128 NRLGQVVDYVRKQAGVRTSKPAEKNNGHIELENKKLEKESKNEQEKEKSENLAKETIPMD 187
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 188 SASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 247
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + +E + + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 248 VNLEPPGPLTLAMSQFLSEM--QENKKRVVTPKELFSQVCKKATRFKGYQQQDSQELLRY 305
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 306 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEEVKNKVKDYEKKKAIPSFVDRIFGGELTST 365
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C EC S V+E FLDLSLPV
Sbjct: 366 IMCDECRTVSLVHESFLDLSLPV 388
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++L++ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 677 VYTNAKKQMLVSLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 735
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP-----KNKV-------KAKKESVGGVW 1013
+ Y L GVVEH GTMR GHY AY + N V + ES G W
Sbjct: 736 EESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQW 795
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V + +VL +AY+LFYE+I
Sbjct: 796 FHISDTHVQAVPITKVLNSQAYLLFYERI 824
>sp|Q08DA3|UBP16_BOVIN Ubiquitin carboxyl-terminal hydrolase 16 OS=Bos taurus GN=USP16
PE=2 SV=1
Length = 826
Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 84/393 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC K K K ++ ++W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDC----------KTDNKVKDKSEEETEENPSVWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H + R H LV+ +N + WC+ C+
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYMKPRSEPHCLVLSLDNWSV-WCYLCDD------- 121
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKS--------------E 212
E + N + L +VV ++ ++ + ED +GN+ E K E
Sbjct: 122 EVHYCNSNRLGQVVDYVRKQAGNTTPESAED----NGNIELENKKLEKESKNEQEREKKE 177
Query: 213 STVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF------- 265
+ ++ + V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 178 NMARENPSMNSTSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEP 237
Query: 266 ----------------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
GPLT+A+ + E + ET + ++ PR F +C KA +FKGYQ
Sbjct: 238 PDLALTEPLEINLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPRELFSQVCKKAVRFKGYQ 295
Query: 310 QHDSHELLRCLLDGLCSEELA------FRKRNSPSEG------NGISSNQG----PVFVD 353
Q DS ELLR LLDG+ +EE + ++ +E N + + P FVD
Sbjct: 296 QQDSQELLRYLLDGMRAEEHQRVSKGILKAFDNSTEKVDEELKNKVKEYEKKKSVPSFVD 355
Query: 354 YVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
+FGG++ ST+ C EC S V+E FLDLSLPV
Sbjct: 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPV 388
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 84/149 (56%), Gaps = 17/149 (11%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
+ +A K++LI+ APP+LT+H KRF Q A L K+N H+ F EI++L P+ C
Sbjct: 678 IYTNAKKQMLISLAPPVLTLHFKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 736
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKA------------KKESVGGVW 1013
+H Y L GVVEH GTMR GHY AY + N + + ES G W
Sbjct: 737 EEHTRVLYSLYGVVEHSGTMRSGHYTAYAKTRTANTHLSNLVLHGDIPQDFEMESTKGQW 796
Query: 1014 YHASDVYVREVSLEEVLRCEAYILFYEKI 1042
+H SD +V+ V +VL +AY+LFYE+I
Sbjct: 797 FHISDTHVQAVPTTKVLSSQAYLLFYERI 825
>sp|Q4R6X7|UBP16_MACFA Ubiquitin carboxyl-terminal hydrolase 16 OS=Macaca fascicularis
GN=USP16 PE=2 SV=2
Length = 826
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYICDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEISS--VDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E + +++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
+ V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + ++ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQG---------PVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ ST
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTST 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 679 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 737
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 738 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 797
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 798 HISDTHVQAVPTTKVLNSQAYLLFYERI 825
>sp|Q9Y5T5|UBP16_HUMAN Ubiquitin carboxyl-terminal hydrolase 16 OS=Homo sapiens GN=USP16
PE=1 SV=1
Length = 823
Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 180/383 (46%), Gaps = 63/383 (16%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG++ + + + + C+DC+ D + K + ++K S +W+
Sbjct: 24 CRHIRKGLEQGNLKKALVNVEWNICQDCK---TDNKVKDKAEEETEEKPS-------VWL 73
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG + + H ++H R H LV+ +N + WC+ C+ + +
Sbjct: 74 CLKCGHQGCGR----NSQEQHALKHYLTPRSEPHCLVLSLDNWSV-WCYVCDNEVQYCSS 128
Query: 167 EENGENKDALSEVVKLIKGRSTEI--SSVDVEDAWFG--SGNVNSEIKSESTVVSGSDLD 222
+ G+ D + + + + E ++++E+ S N K E+ ++
Sbjct: 129 NQLGQVVDYVRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
Query: 223 GNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF----------------- 265
V+GL+NLGNTCFFN+VMQNL L++ +++
Sbjct: 189 SPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLE 248
Query: 266 ------GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRC 319
GPLT+A+ + E + ET + V+ P+ F +C KA +FKGYQQ DS ELLR
Sbjct: 249 INLEPPGPLTLAMSQFLNEMQ-ETK-KGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRY 306
Query: 320 LLDGLCSEELAFRKR-------NSPSEGNGISSNQ---------GPVFVDYVFGGQIAST 363
LLDG+ +EE + NS + + N+ P FVD +FGG++ S
Sbjct: 307 LLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSM 366
Query: 364 VRCVECGHSSTVYEPFLDLSLPV 386
+ C +C S V+E FLDLSLPV
Sbjct: 367 IMCDQCRTVSLVHESFLDLSLPV 389
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCT--- 966
V +A K++LI+ APP+LT+HLKRF Q A L K+N H+ F EI++L P+ C
Sbjct: 676 VYTNAKKQMLISLAPPVLTLHLKRFQQ-AGFNLRKVNKHIKFPEILDLAPFCTLKCKNVA 734
Query: 967 -DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-----------GVWY 1014
++ Y L GVVEH GTMR GHY AY + N + G G W+
Sbjct: 735 EENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWF 794
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
H SD +V+ V +VL +AY+LFYE+I
Sbjct: 795 HISDTHVQAVPTTKVLNSQAYLLFYERI 822
>sp|A8HAL1|UBP16_DANRE Ubiquitin carboxyl-terminal hydrolase 16 OS=Danio rerio GN=usp16
PE=2 SV=1
Length = 815
Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 178/412 (43%), Gaps = 87/412 (21%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ KG ++ + + C+DC + + + G +S A+W+
Sbjct: 24 CTHIRKGTENSVLKKACLNEHWSSCQDCEQDKPEEKQILEDQTDG--------ESPAVWM 75
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CGH CG G H ++H R H LV+ + + WC+ C+ + T
Sbjct: 76 CLKCGHRGCGRSG-----NQHAIKHYETPRSEPHCLVLSLDVWSV-WCYICDDEVQYSST 129
Query: 167 -------------------EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNS 207
+ N K ++ + T+ + S
Sbjct: 130 GQLAQLITNIRKQVLTAPDKRNASKKSWKEDISVMNSAEQTQDEEKGKKGKQKSSSKQED 189
Query: 208 EIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--------- 258
KS + +GS +A VRGL+NLGNTCFFN+V+Q+L L++
Sbjct: 190 SPKSHQSAAAGS----SAVVSVRGLSNLGNTCFFNAVVQSLSQTQYLRELLKQIAEEKSS 245
Query: 259 ------LNAEL--------TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQ 304
L++EL G LT+A+ +L E + ET + V+ P+ F +C KAP+
Sbjct: 246 FSITPALSSELDPLQIQLERPGSLTLAMCQLMNEIQ-ETK-KGVVTPKELFTQVCKKAPR 303
Query: 305 FKGYQQHDSHELLRCLLDGLCSEELAFRKRNS------PSEGNGISSNQGPV-------- 350
FKG+QQ DS ELLR LLDG+ +EE ++ NS S G + Q
Sbjct: 304 FKGFQQQDSQELLRYLLDGMRAEEA--KRVNSGILEALKSSGKNFEAEQTKKIVKEYEKD 361
Query: 351 -----FVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQ 397
FVD VFGG ++STV C EC S V E FLDLSLPV +A KK Q
Sbjct: 362 GAPKNFVDRVFGGAMSSTVMCKECKTVSLVTEMFLDLSLPV-ADEAYRKKNQ 412
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 82/146 (56%), Gaps = 14/146 (9%)
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V RDA K++LI+ P +LT+HLKRF Q A + K+N HV F +I++L P+ CT
Sbjct: 670 VYRDALKQMLISDPPVVLTLHLKRFQQVAYS-VCKVNRHVQFPQILDLAPFCSLNCTGVK 728
Query: 968 --HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGP------KNKVKAKK---ESVGGVWYHA 1016
Y L G+VEH GTMR GHY AYV+ P +N A E+ G W+H
Sbjct: 729 EGETQVLYSLYGIVEHSGTMRSGHYTAYVKSRPSTHNCVQNGTAAASGDAEASKGSWFHI 788
Query: 1017 SDVYVREVSLEEVLRCEAYILFYEKI 1042
SD V V +V +AY+LFYEKI
Sbjct: 789 SDSSVHPVPEAKVQSSQAYLLFYEKI 814
>sp|Q70EL2|UBP45_HUMAN Ubiquitin carboxyl-terminal hydrolase 45 OS=Homo sapiens GN=USP45
PE=1 SV=3
Length = 814
Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 80/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ I + + I + C +C + +RR G+ LV + IW+
Sbjct: 38 CQHVSHAISVNHVKRAIAENLWSVCSEC---LKERRFYDGQ----------LVLTSDIWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTR---HPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H ++H + +R H ++I + + WC+ C+ EK
Sbjct: 85 CLKCGFQGCG----KNSESQHSLKHFKSSRTEPHCIIINL-STWIIWCYECD-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ +++ + + F E K E+ + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHASK-----TQTSAFSRIMKLCEEKCETDEIQ----KGGKC 184
Query: 227 --YVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
VRG+ NLGNTCFFN+VMQNL L D L E
Sbjct: 185 RNLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + ET + ++P+ F +C KAP+FK +QQ DS ELL LL
Sbjct: 245 LSRPGPLTSALF-LFLHSMKETE-KGPLSPKVLFNQLCQKAPRFKDFQQQDSQELLHYLL 302
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 303 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 362
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + STV +PF+D+SLP+
Sbjct: 363 MCEECANISTVKDPFIDISLPI 384
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 25/212 (11%)
Query: 852 SCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINS----KI 907
+ SQ IT E CS+ +++ ++ +++L+ NC + K +E S K+
Sbjct: 606 TLSQSYITTSKE--CSIQSCLYQ-FTSMELLMGNNKLLCENCTKNKQKYQEETSFAEKKV 662
Query: 908 VKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD 967
V +A K++LI+ P +L +HLKRF Q A L K+N HV+F +++L P+ C +
Sbjct: 663 EGVYTNARKQLLISAVPAVLILHLKRFHQ-AGLSLRKVNRHVDFPLMLDLAPFCSATCKN 721
Query: 968 H---DNYDYRLVGVVEHLGTMRGGHYVAYVR-GGPKNKV---KAKKESVGGV-------- 1012
D Y L G+VEH G+MR GHY AYV+ P K+ KK++V G+
Sbjct: 722 ASVGDKVLYGLYGIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPGLKAADNESA 781
Query: 1013 --WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD Y++ V L +AY+LFYE++
Sbjct: 782 GQWVHVSDTYLQVVPESRALSAQAYLLFYERV 813
Score = 33.9 bits (76), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 708 SVESCLVHFIKPELLTDDNAWDCESCSKTLQRQKLEA 744
S++SCL F ELL +N CE+C+K Q+ + E
Sbjct: 619 SIQSCLYQFTSMELLMGNNKLLCENCTKNKQKYQEET 655
>sp|Q8K387|UBP45_MOUSE Ubiquitin carboxyl-terminal hydrolase 45 OS=Mus musculus GN=Usp45
PE=2 SV=1
Length = 813
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 168/382 (43%), Gaps = 79/382 (20%)
Query: 50 CPHLDKGIDSDKISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWV 109
C H+ + + + + S C +C + +RR G+ V +W+
Sbjct: 38 CQHVSYAVSVNHVKKAVAESLWSVCSEC---LKERRFCDGQP----------VLPADVWL 84
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQT---RHPLVIQWENPHLRWCFPCNTLIPVEKT 166
CL CG CG + H +RH + + H +VI + WC+ CN EK
Sbjct: 85 CLKCGLQGCGK----NSESQHSLRHFKSSGTESHCVVISLST-WVIWCYECN-----EKL 134
Query: 167 EENGENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNAC 226
+ NK L+++V ++ + + + A+ + E + + G C
Sbjct: 135 STHC-NKKVLAQIVDFLQKHAFKTQT----GAFSRIIKLCEEKREAGEIKKGK----KGC 185
Query: 227 YV--VRGLANLGNTCFFNSVMQNLLAMSQLQDYF----------------------LNAE 262
V V+G+ NLGNTCFFN+V+QNL L + L E
Sbjct: 186 TVPSVKGITNLGNTCFFNAVIQNLAQTYILFELMNEIKEDGTKFKISLSSAPQLEPLVVE 245
Query: 263 LTF-GPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
L+ GPLT AL LF + E + ++P+ F +C KAP+FKG+QQ DS ELL LL
Sbjct: 246 LSSPGPLTSALF-LFLHSMKEAE-KGPLSPKVLFNQLCQKAPRFKGFQQQDSQELLHHLL 303
Query: 322 DGLCSEELA------FRKRNSPSEGNGISSNQGPV-----------FVDYVFGGQIASTV 364
D + +EE + N+P+ + V F+D +F G++ STV
Sbjct: 304 DAVRTEETKRIQASILKAFNNPTTKTADDETRKKVKAYGKEGVKMNFIDRIFIGELTSTV 363
Query: 365 RCVECGHSSTVYEPFLDLSLPV 386
C EC + ST+ +PF+D+SLP+
Sbjct: 364 MCEECANISTMKDPFIDISLPI 385
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 854 SQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKVEEINSKIVK---- 909
SQ +T E CSV +++ ++ +++L+ +C + K + S K
Sbjct: 607 SQSYVTTSKE--CSVQSCLYQ-FTSMELLMGNNKLLCEDCTEKRRKCHKETSSAEKKAGG 663
Query: 910 VKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTD-- 967
V +A K++LI+ P IL +HLKRF Q A L K+N HV+F ++L P+ C +
Sbjct: 664 VYTNARKQLLISAVPAILILHLKRFHQ-AGLSLRKVNRHVDFPLTLDLAPFCAATCKNIS 722
Query: 968 -HDNYDYRLVGVVEHLGTMRGGHYVAYVR------------GGPKNKVKAKKE--SVGGV 1012
+ Y L G+VEH G+MRGGHY AYV+ G K K+ +GG
Sbjct: 723 VGEKVLYGLYGIVEHSGSMRGGHYTAYVKVRVPSRKLSECITGRKTAAGLKEPDGELGGH 782
Query: 1013 WYHASDVYVREVSLEEVLRCEAYILFYEKI 1042
W H SD YV+ V L +AY+LFYE+I
Sbjct: 783 WVHVSDTYVQVVPESRALSAQAYLLFYERI 812
>sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis
thaliana GN=UBP11 PE=3 SV=2
Length = 892
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL-------NAELTFG---PLTIALKKLFAETK 280
GL NLGNTCF NS +Q L + +YFL NA+ G L IA +L K
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELL--RK 359
Query: 281 PETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEG 340
+ +N + PR+F + APQF GY QHDS E+L LLDGL E+L KR E
Sbjct: 360 LWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGL-HEDLNKVKRKPYIEA 418
Query: 341 NGI----------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSL 384
+ V VD VF GQ ST+ C +CG S ++PF+ LSL
Sbjct: 419 KDSDGRPDDEVAEEKWKYHKARNDSVIVD-VFQGQYKSTLVCPDCGKISITFDPFMYLSL 477
Query: 385 PVPTKKAPS 393
P+P+ + S
Sbjct: 478 PLPSSRTRS 486
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ D
Sbjct: 760 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYFKNKIDTLVNFHIHDLDLSKYVKN--ED 816
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L + H G + GGHY AY + + K WY+ D V V+
Sbjct: 817 GQSYLYELYAISNHYGGLGGGHYTAYAKLMDETK-----------WYNFDDSRVSAVNES 865
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY+++
Sbjct: 866 EIKTSAAYVLFYQRV 880
>sp|Q9R085|UBP15_RAT Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus
GN=Usp15 PE=1 SV=1
Length = 952
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 439 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 473
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 SSASEDQIVSKAAYVLFYQR 903
>sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15
PE=2 SV=1
Length = 981
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK S + P ++ + K+ K G I
Sbjct: 468 LPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNI 502
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
PE=1 SV=2
Length = 613
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 24/185 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL------TIALKKLFA---ETKP 281
GL NLGNTCF NS++Q L +L+DY L L L AL + FA +T
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGHTSSAHTALMEEFAKLIQTIW 334
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSE 339
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E +A R + SP
Sbjct: 335 TSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPET 394
Query: 340 GNGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
+ + + ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 395 LDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIA 454
Query: 388 TKKAP 392
+ P
Sbjct: 455 KRGYP 459
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 495 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 550
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 551 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVTPMSSSQVRTSDA 599
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 600 YLLFYE 605
>sp|Q2HJE4|UBP15_BOVIN Ubiquitin carboxyl-terminal hydrolase 15 OS=Bos taurus GN=USP15
PE=2 SV=1
Length = 952
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS Q L L +YFLN EL F PL + + K +AE +
Sbjct: 261 GLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 320
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 321 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 380
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 381 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 438
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 439 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 473
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 784 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 841
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 842 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 883
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 884 STASEDQIVSKAAYVLFYQR 903
>sp|Q5U349|UBP2_RAT Ubiquitin carboxyl-terminal hydrolase 2 OS=Rattus norvegicus
GN=Usp2 PE=1 SV=1
Length = 618
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 24/205 (11%)
Query: 211 SESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTFGPL-- 268
S ST ++ + + GL NLGNTCF NS++Q L +L+DY L L L
Sbjct: 261 SRSTSPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLGH 319
Query: 269 ----TIALKKLFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLL 321
AL + FA +T + +V++P F I AP+F GY Q D+ E LR LL
Sbjct: 320 TSSAHTALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLL 379
Query: 322 DGLCSE--ELAFRKRNSPSEGNGISSNQG--PVFVDYV----------FGGQIASTVRCV 367
DGL +E +A R + SP + + + ++ Y+ F GQ+ S++ C
Sbjct: 380 DGLHNEVNRVAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCT 439
Query: 368 ECGHSSTVYEPFLDLSLPVPTKKAP 392
+CG+ STV++PF DLSLP+ + P
Sbjct: 440 DCGYCSTVFDPFWDLSLPIAKRGYP 464
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ + + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 500 KKFSVQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 555
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 556 LYAVSNHSGTTMGGHYTAYCR-----------SPVTGEWHTFNDSSVTPMSSSQVRTSDA 604
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 605 YLLFYE 610
>sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15
PE=1 SV=3
Length = 981
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL F PL + + K +AE +
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQM 349
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 350 WSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 409
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N + N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 410 ADGRPDKVVAEEAWENHLKRNDS-IIVD-IFHGLFKSTLVCPECAKISVTFDPFCYLTLP 467
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 468 LPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNI 502
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEIINLRPYM 961
K + ATK++ + PP+L +HLKRFS +R KL+ V+F SE + + P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPINDLDMSEFL-INPNA 870
Query: 962 DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYV 1021
P C Y L+ V H G M GGHY A+ KNK K WY+ D V
Sbjct: 871 GP-CR------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSSV 912
Query: 1022 REVSLEEVLRCEAYILFYEK 1041
S ++++ AY+LFY++
Sbjct: 913 STASEDQIVSKAAYVLFYQR 932
>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
PE=1 SV=2
Length = 605
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTFGP-LTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L +L G AL + FA +T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 327
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ +V++P F I AP+F GY Q D+ E LR LLDGL +E + R +++P
Sbjct: 328 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 387
Query: 341 NGISSNQG--PVFVDYV----------FGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y+ F GQ+ S++ C +CG+ STV++PF DLSLP+
Sbjct: 388 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 447
Query: 389 KKAP 392
+ P
Sbjct: 448 RGYP 451
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 487 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTTFVNFPLRDLDLREFASEN-TNHAVYN-- 542
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVG-GVWYHASDVYVREVSLEEVLRCE 1033
L V H GT GGHY AY R S G G W+ +D V +S +V +
Sbjct: 543 LYAVSNHSGTTMGGHYTAYCR------------SPGTGEWHTFNDSSVTPMSSSQVRTSD 590
Query: 1034 AYILFYE 1040
AY+LFYE
Sbjct: 591 AYLLFYE 597
>sp|Q99K46|UBP11_MOUSE Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11
PE=2 SV=4
Length = 921
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAETKPET 283
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + L + +A+ +T
Sbjct: 258 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQT 317
Query: 284 --GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGN 341
G I P F + A QF GYQQHDS ELL LLDGL + +K+ N
Sbjct: 318 WSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCN 377
Query: 342 GI---------------SSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
G V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 378 GAGRPDLEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 436
Query: 387 PT 388
P
Sbjct: 437 PV 438
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 21/134 (15%)
Query: 914 ATKRVLINKAPPILTIHLKRFS--QDARGRLSKLNGH----VNFSEIINLRPYMDPGCTD 967
ATK++ + P +L IHLKRFS + +R +L L ++FSE + ++P + +
Sbjct: 770 ATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFV-IKPKNE---SS 825
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
D Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 826 PDLYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNEN 874
Query: 1028 EVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 875 QIESKAAYVLFYQR 888
>sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana
GN=UBP10 PE=2 SV=2
Length = 923
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 90/188 (47%), Gaps = 38/188 (20%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIA----LKKLF 276
GL+NLGNTCF NS +Q L + +YFL N G L IA LKKL+
Sbjct: 305 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 364
Query: 277 AETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNS 336
+ RN + PR+F + APQF GY QHDS ELL LLDGL E+L KR
Sbjct: 365 SSG------RNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNKVKRKP 417
Query: 337 PSE----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFL 380
E N + V VD V GQ ST+ C CG S ++PF+
Sbjct: 418 YIELKDSDSRPDDEVAEELWNYHKARNDSVIVD-VCQGQYKSTLVCPVCGKISITFDPFM 476
Query: 381 DLSLPVPT 388
LS+P+P+
Sbjct: 477 YLSVPLPS 484
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ +
Sbjct: 775 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYLKNKIDTFVNFPVHDLDLSKYVKN--KN 831
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L V H G + GGHY AY + NK WYH D +V V+
Sbjct: 832 GQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNK-----------WYHFDDSHVSSVNES 880
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY ++
Sbjct: 881 EIRNSAAYVLFYRRV 895
>sp|Q9P7S5|UBP7_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 7
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp7 PE=1 SV=1
Length = 875
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 910 VKRDATKRVLINK-APPILTIHLKRF----SQDARGRLSKLNGHVNFSEIINLRPYMDPG 964
V R+A KR+L++ PP+ IHLKRF S D K++ + F + ++L ++ P
Sbjct: 728 VYRNAYKRMLLDDPLPPVFIIHLKRFFQEISHDGYANPKKISDFIEFEQELDLNEFVMPH 787
Query: 965 CTDHDNYDYRLVGVVEHLGTMRGGHYVAYV-------RGGPKNKVKAKKESVG---GVWY 1014
++ YRL GV+ H GT+ GHYVAYV P K + G W
Sbjct: 788 LRASSSFRYRLFGVIVHSGTLNYGHYVAYVLSHKFLDLSAPSTNSKDFRSEAGIPERRWL 847
Query: 1015 HASDVYVREVSLEEVLRCEAYILFYEKI 1042
+ SD VRE S +EV + EAY+LFYE++
Sbjct: 848 YISDNIVRESSWDEVSKVEAYMLFYERV 875
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----------LNAELTFGP---LTIALKKLFA 277
GL NLG TCFFNS +Q L A L D + +LT P L A K
Sbjct: 209 GLKNLGATCFFNSTLQVLCACEALHDVISPFQYSHSSVIVRKLTKSPESSLLSAFIKFLE 268
Query: 278 ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN 335
G +V P +FFG PQF Q D+HELLR LLD L SEE + N
Sbjct: 269 TFYKSDGTISVYRPTTFFGEFRRLHPQFSESVQQDAHELLRLLLDDLISEEFRVLRFN 326
Score = 38.5 bits (88), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 301 KAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQI 360
K+PQF Q S ++LR L L S+++ K + + SS+ + + +F G++
Sbjct: 485 KSPQF----QRRSLDILR--LGELSSDDMMLDK----ATMDEFSSS---LVIKSIFTGRL 531
Query: 361 ASTVRCVECGHSSTVYEPFLDLSLPV--PTKKAPSK-KTQPASRAKKTKLPPKKSGRIRA 417
S V C C + EP DLS+P+ P+ + + + A R++ ++ P K S +I
Sbjct: 532 TSVVMCQSCNEITNTPEPIQDLSIPIHYPSSRVSRRHRFHRALRSRFSRSPKKSSVKIVV 591
Query: 418 KGTKD 422
D
Sbjct: 592 DNAND 596
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 91/190 (47%), Gaps = 38/190 (20%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL----------NAELTFGPLTIA----LKK 274
+ GL+NLGNTCF NS +Q L + +YFL N G L IA LKK
Sbjct: 302 LAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKK 361
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
L++ RN + PR+F + APQF GY QHDS ELL LLDGL E+L KR
Sbjct: 362 LWSSG------RNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLNKVKR 414
Query: 335 NSPSE----------------GNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEP 378
E N + V VD V GQ ST+ C CG S ++P
Sbjct: 415 KPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVD-VCQGQYKSTLVCPACGKISITFDP 473
Query: 379 FLDLSLPVPT 388
F+ LS+P+P+
Sbjct: 474 FMYLSVPLPS 483
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + K P IL HLKRF+ +R +K++ VNF ++L Y+ +
Sbjct: 774 KEHRQANKKLDLWKLPDILVFHLKRFTY-SRYLKNKIDTFVNFPVHDLDLSKYVK--NKN 830
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
+Y Y L V H G + GGHY AY + N+ WYH D +V V+
Sbjct: 831 DQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNE-----------WYHFDDSHVSSVNES 879
Query: 1028 EVLRCEAYILFYEKI 1042
E+ AY+LFY ++
Sbjct: 880 EIKNSAAYVLFYRRV 894
>sp|F6Z5C0|UBP15_XENTR Ubiquitin carboxyl-terminal hydrolase 15 OS=Xenopus tropicalis
GN=usp15 PE=2 SV=2
Length = 982
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNA----ELTF-GPLTI--ALKKLFAETKPE- 282
GL+NLGNTCF NS +Q L L +YFLN EL PL + + K +AE +
Sbjct: 289 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAELIKQM 348
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR------- 334
+G + + PR+F + APQF GYQQ D ELL LLDGL + RK+
Sbjct: 349 WSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKD 408
Query: 335 ---------NSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLP 385
+ N I N + VD +F G ST+ C EC S ++PF L+LP
Sbjct: 409 ADGRPDKVVAEEAWENHIKRNDS-IIVD-IFHGLFKSTLVCPECSKISVTFDPFCYLTLP 466
Query: 386 VPTKKAPSK-----KTQPASRAKKTKLPPKKSGRI 415
+P KK + + P ++ + K+ K G I
Sbjct: 467 LPMKKERALEVYLVRMDPLAKPMQYKVIVPKIGNI 501
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 29/141 (20%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF--------SEIINLRPY 960
K + ATK++ + PP+L +HLKRFS +R KL+ V+F + +IN P
Sbjct: 813 KEHQQATKKLDLWSLPPVLVVHLKRFSY-SRYMRDKLDTLVDFPISDLDMSTFLIN--PN 869
Query: 961 MDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVY 1020
P C Y L+ V H G M GGHY A+ KNK K WY+ D
Sbjct: 870 AGPCC-------YNLIAVSNHYGGMGGGHYTAFA----KNKDDGK-------WYYFDDSS 911
Query: 1021 VREVSLEEVLRCEAYILFYEK 1041
V S E+++ AY+LFY++
Sbjct: 912 VSTASEEQIVSKAAYVLFYQR 932
>sp|Q2KHV7|UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2 OS=Bos taurus GN=USP2 PE=2
SV=1
Length = 606
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 24/213 (11%)
Query: 203 GNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE 262
G + + S S+ ++ + + GL NLGNTCF NS++Q L +L+DY L
Sbjct: 241 GKGQALVSSRSSSPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ-R 299
Query: 263 LTFGPLT------IALKKLFA---ETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDS 313
L L+ AL + FA +T + +V++P F I AP+F GY Q D+
Sbjct: 300 LYLRDLSHSSRAHTALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDA 359
Query: 314 HELLRCLLDGLCSEE---LAFRKRNSPSEGNGISSNQG-PVFVDYV----------FGGQ 359
E LR LLDGL +E +A K N+ + + +G ++ Y+ F GQ
Sbjct: 360 QEFLRFLLDGLHNEVNRVIARPKSNTENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQ 419
Query: 360 IASTVRCVECGHSSTVYEPFLDLSLPVPTKKAP 392
+ S++ C +CG+ STV++PF DLSLP+ + P
Sbjct: 420 LKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYP 452
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 916 KRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHDNYDYR 974
K+ I + P IL +HLKRFS+ +R R SKL VNF ++LR + T+H Y+
Sbjct: 488 KKFSIQRFPKILVLHLKRFSE-SRIRTSKLTAFVNFPLRDLDLREFASEN-TNHAVYN-- 543
Query: 975 LVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEA 1034
L V H GT GGHY AY R V G W+ +D V +S +V +A
Sbjct: 544 LYAVSNHSGTTMGGHYTAYCRS-----------PVTGEWHTFNDSSVSPMSSSQVRTSDA 592
Query: 1035 YILFYE 1040
Y+LFYE
Sbjct: 593 YLLFYE 598
>sp|P35123|UBP4_MOUSE Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4
PE=1 SV=3
Length = 962
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L +YFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 419
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 420 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 479 LPLPLKK 485
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII---NLR 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + + R
Sbjct: 802 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFVCDRSAR 860
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY K + G WY+ D
Sbjct: 861 PYV-----------YDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDD 898
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 899 SSVSLASEDQIVTKAAYVLFYQR 921
>sp|Q9Y6I4|UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3
PE=1 SV=2
Length = 520
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 136/337 (40%), Gaps = 75/337 (22%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPL---------------VIQWEN 148
+K+ WVCL C CG H +H + PL V +
Sbjct: 35 NKSPWVCLTCSSVHCGRY-----VNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCS 89
Query: 149 PHLRWCFPCNTLIP-------VEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAWFG 201
+ +C+ C+ + V+K E+ +N + + K R +E
Sbjct: 90 SYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKL------LE----- 138
Query: 202 SGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF--- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 ----NSTLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKEL 190
Query: 259 ----LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKA 302
L T G T ++L + F +T G + +P S F +
Sbjct: 191 PAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIM 250
Query: 303 PQFKGYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFV 352
P F+GYQQ D+HE +R LLD L S ++ ++ S N N V
Sbjct: 251 PNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVV 310
Query: 353 DYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
+FGG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P +L +HLKRF A R +K++ +V F ++++ Y ++P + ++ Y L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLR-NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V++ +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------ATHE---GRWFHFNDSTVTLTDEETVVKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>sp|Q91W36|UBP3_MOUSE Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus GN=Usp3
PE=2 SV=1
Length = 520
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 206 NSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYF------- 258
NS + S+ V+GS GL NLGNTCF N+++Q+L + Q YF
Sbjct: 139 NSSLNSKLLKVNGS----TTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVE 194
Query: 259 LNAELTFGPLT----------IALKKLFAET--KPETGLRNVINPRSFFGCICSKAPQFK 306
L T G T ++L + F +T G + +P S F + P F+
Sbjct: 195 LRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFR 254
Query: 307 GYQQHDSHELLRCLLDGL----------CSEELAFRKRNSPSEGNGISSNQGPVFVDYVF 356
GYQQ D+HE +R LLD L S ++ ++ S N N V +F
Sbjct: 255 GYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIF 314
Query: 357 GGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
GG + + V C+ CG S ++PFLDLSL +P++
Sbjct: 315 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 347
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
Query: 920 INKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPY-MDPGCTDHDNYDYRLVG 977
I K P L +HLKRF A R +K++ +V F ++++ Y ++P + D+ Y L
Sbjct: 400 IQKLPKALCLHLKRFHWTAYLR-NKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAA 458
Query: 978 VVEHLGTMRG-GHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRCEAYI 1036
VV H G+ G GHY AY A E G W+H +D V E V + +AYI
Sbjct: 459 VVVHHGSGVGSGHYTAY----------AVHE---GRWFHFNDSTVTVTDEETVGKAKAYI 505
Query: 1037 LFY 1039
LFY
Sbjct: 506 LFY 508
>sp|B2GUZ1|UBP4_RAT Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus
GN=Usp4 PE=1 SV=1
Length = 961
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L L +YFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN---S 336
+G + PR F + APQF GYQQ DS ELL +LDGL E+L K+
Sbjct: 361 QMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGL-HEDLNRVKKKPYLE 419
Query: 337 PSEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
P + NG + + + V VD F G ST+ C EC S ++PF L+
Sbjct: 420 PKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYLT 478
Query: 384 LPVPTKK 390
LP+P KK
Sbjct: 479 LPLPLKK 485
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ C
Sbjct: 801 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRALNMSEFV---CDR 856
Query: 968 HDN-YDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY K + G WY+ D V S
Sbjct: 857 AARPYVYDLIAVSNHYGAMGVGHYTAYA-----------KNRLNGKWYYFDDSSVSLASE 905
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 906 DQIVTKAAYVLFYQR 920
>sp|Q70EK9|UBP51_HUMAN Ubiquitin carboxyl-terminal hydrolase 51 OS=Homo sapiens GN=USP51
PE=2 SV=1
Length = 711
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ +HA +H L + + + +CF C + + E+
Sbjct: 249 CLSCVFFGC-------FTEKHIHKHAETKQHHLAVDLYHG-VIYCFMCKDYVYDKDIEQI 300
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSE--STVVSGSDLDGNACY 227
K+ ++++L+ ST++S + F E K + V + Y
Sbjct: 301 A--KETKEKILRLLTSTSTDVSHQQFMTSGFEDKQSTCETKEQEPKLVKPKKKRRKKSVY 358
Query: 228 VV--RGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAE---LTFGP---LTIALKKLFAET 279
V RGL NLGNTCF N ++Q L + L+D+FL+ + + P L + LF
Sbjct: 359 TVGLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAM 418
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
+G R P I A GY+Q D+HE L +LD L R+S +
Sbjct: 419 Y--SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVL--------HRHSKDD 468
Query: 340 GNGISSNQ---GPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVP 387
G +N +D +F G + S V C C ST +P D+SL +P
Sbjct: 469 SGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLP 519
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY--------MDP 963
+++TK++ + K P + HLKRF + R K+N ++F +++ P+ M
Sbjct: 577 QESTKQLTMKKLPIVACFHLKRFEHVGKQR-RKINTFISFPLELDMTPFLASTKESRMKE 635
Query: 964 G-----CTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
G C ++N Y L V+ H GT+ GHY +++R +K+ W+ D
Sbjct: 636 GQPPTDCVPNEN-KYSLFAVINHHGTLESGHYTSFIR--------QQKDQ----WFSCDD 682
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + ++E++L E Y+LFY K
Sbjct: 683 AIITKATIEDLLYSEGYLLFYHK 705
>sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2
SV=1
Length = 963
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYM-DPGCT 966
K + ATK+ + P IL +HLKRFS + R KL+ V F +N+ ++ DP
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPVRGLNMSEFVCDPSAR 861
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
Y Y L+ V H G M GHY AY KNK+ K WY+ D V
Sbjct: 862 P---YVYDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDDSNVSLACE 907
Query: 1027 EEVLRCEAYILFYEK 1041
++++ AY+LFY++
Sbjct: 908 DQIVTKAAYVLFYQR 922
>sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4
PE=2 SV=1
Length = 963
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDVVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 803 KKHQQATKKSDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 22/181 (12%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFA---ETKPE 282
GL NLGNTCF NS++Q L +L+DY L + + AL FA +
Sbjct: 20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 79
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSE--ELAFRKRNSPSEG 340
+ + ++P F I AP+F GY Q D+ E LR LLDGL E + R R +
Sbjct: 80 SSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANADTL 139
Query: 341 NGISSNQGP--VFVDY----------VFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPT 388
+ + ++ ++ Y +F GQ+ S++ C ECG+ ST ++PF DLSLP+P
Sbjct: 140 DHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPK 199
Query: 389 K 389
K
Sbjct: 200 K 200
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K + TK+ I K P IL +HLKRFS+ AR R SKL VNF + ++LR + C
Sbjct: 232 KARTRCTKKFSIQKFPKILVLHLKRFSE-ARIRASKLTTFVNFPLKDLDLREFASQSC-- 288
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
++ Y L V H GT GGHY AY K + W+ +D V +S
Sbjct: 289 -NHAVYNLYAVSNHSGTTMGGHYTAYC-----------KSPISSEWHSFNDSRVTPMSSS 336
Query: 1028 EVLRCEAYILFYE 1040
V +AY+LFYE
Sbjct: 337 HVRSSDAYLLFYE 349
>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4
PE=1 SV=3
Length = 963
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIALKKLFAETKPE--- 282
GL NLGNTCF NS +Q L + L DYFL E PL +K AE E
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL--GMKGEIAEAYAELIK 360
Query: 283 ---TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP-- 337
+G + PR F + APQF GYQQ DS ELL LLDGL E+L R + P
Sbjct: 361 QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL-HEDLN-RVKKKPYL 418
Query: 338 --SEGNG----ISSNQG---------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ NG + + + V VD F G ST+ C EC S ++PF L
Sbjct: 419 ELKDANGRPDAVVAKEAWENHRLRNDSVIVD-TFHGLFKSTLVCPECAKVSVTFDPFCYL 477
Query: 383 SLPVPTKK 390
+LP+P KK
Sbjct: 478 TLPLPLKK 485
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNF-------SEII-NL--R 958
K + ATK+ + P IL +HLKRFS + R KL+ V F SE + NL R
Sbjct: 803 KKHQQATKKFDLWSLPKILVVHLKRFSYNRYWR-DKLDTVVEFPIRGLNMSEFVCNLSAR 861
Query: 959 PYMDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
PY+ Y L+ V H G M GHY AY KNK+ K WY+ D
Sbjct: 862 PYV-----------YDLIAVSNHYGAMGVGHYTAYA----KNKLNGK-------WYYFDD 899
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
V S ++++ AY+LFY++
Sbjct: 900 SNVSLASEDQIVTKAAYVLFYQR 922
>sp|P51784|UBP11_HUMAN Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11
PE=1 SV=3
Length = 963
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLN----AELTF-GPLTIA--LKKLFAET--KP 281
GL NLGNTCF NS +Q L + QL +YFLN EL F PL + + + +A+ +
Sbjct: 310 GLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQA 369
Query: 282 ETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRN------ 335
+G I P F + A QF GYQQHDS ELL LLDGL + +K+
Sbjct: 370 WSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCD 429
Query: 336 ---SPSEGNGISSNQG------PVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPV 386
P + + Q V VD F G ST+ C +CG+ S ++PF LS+P+
Sbjct: 430 AAGRPDQEVAQEAWQNHKRRNDSVIVD-TFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPL 488
Query: 387 PTKKAPSKKT-----QPASRAKKTKLPPKKSGRI 415
P + P + ++ +L K G+I
Sbjct: 489 PISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKI 522
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 914 ATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHV-------NFSEIINLRPYMDPGCT 966
ATK++ + P IL IHLKRFS R KL+ V +FSE + ++P + +
Sbjct: 811 ATKKLDLWMLPEILIIHLKRFSYTKFSR-EKLDTLVEFPIRDLDFSEFV-IQPQNE---S 865
Query: 967 DHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSL 1026
+ + Y Y L+ V H G MR GHY + K+S G W++ D V V+
Sbjct: 866 NPELYKYDLIAVSNHYGGMRDGHYTTFA---------CNKDS--GQWHYFDDNSVSPVNE 914
Query: 1027 EEVLRCEAYILFYEK 1041
++ AY+LFY++
Sbjct: 915 NQIESKAAYVLFYQR 929
>sp|Q6DCJ1|UB22B_XENLA Ubiquitin carboxyl-terminal hydrolase 22-B OS=Xenopus laevis
GN=usp22-b PE=2 SV=2
Length = 523
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 136/336 (40%), Gaps = 35/336 (10%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G+ L + CL C ++ C + H+ HA+ R
Sbjct: 32 GTPETRKRKAKSCVCHMCGAHL---NRLHSCLYCVYFGC-------FTKKHIHEHAKNKR 81
Query: 140 HPLVIQWENPHLRWCFPCNTLIP---VEKTEENGENKDALSEVVKLIKGRSTEISSVDVE 196
H L I + +CF C I +E+ + + K +V + + V
Sbjct: 82 HNLAIDLLYGGI-YCFMCQDYIYDKDMEQVAKEEQRKAWKLQVFSPALVSPYQYTMTGVG 140
Query: 197 DAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQD 256
+ + E++ + N +RGL NLGNTCF N ++Q L L+D
Sbjct: 141 EKYSTWEPTKRELELLQHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRD 200
Query: 257 YFLN----AELTFGP---LTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
+FL+ E+ P L + LF E +G R+ P + + A GY+
Sbjct: 201 FFLSDRHKCEMQ-SPNSCLVCEMSTLFQEF--YSGHRSPHIPYRLLHLVWTHARHLAGYE 257
Query: 310 QHDSHELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRC 366
Q D+HE L LD L C + +K N+P+ N I +D +F G + S V C
Sbjct: 258 QQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCI--------IDQIFTGGLQSDVTC 309
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRA 402
C ST +PF D+SL +P P P S A
Sbjct: 310 QVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDA 345
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 388 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMMPFMASSKESRMNG 446
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + H++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 447 QYQQPSDSLHNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 494
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++V+ E Y+LFY K
Sbjct: 495 AIITKASIKDVIDSEGYLLFYHK 517
>sp|O94966|UBP19_HUMAN Ubiquitin carboxyl-terminal hydrolase 19 OS=Homo sapiens GN=USP19
PE=1 SV=2
Length = 1318
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 498 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 557
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G + P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 558 W--KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 613
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 614 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 672
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 673 PVPLPQKQ 680
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1085 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1143
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1144 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1199
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1200 QVVTRYAYVLFYRR 1213
>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus
GN=Usp19 PE=1 SV=1
Length = 1357
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 537 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 596
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 597 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 652
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 653 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 711
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 712 PVPLPQKQ 719
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1124 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1182
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R P ++ +++ VG W D V V
Sbjct: 1183 EQLPSYDLYAVINHYGGMIGGHYTACAR-LPSDR-SSQRSDVG--WRLFDDSTVTTVDES 1238
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1239 QVVTRYAYVLFYRR 1252
>sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus musculus GN=Usp19
PE=2 SV=1
Length = 1360
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYF----LNAELTF-------GPLTIALKKLFAET 279
GL NLGNTCF NSV+Q+L +L+D+F AE+ + G L I L
Sbjct: 540 GLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLLRAL 599
Query: 280 KPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSE 339
G P + SKA QF GY QHD+ E + LLDGL E+L R +N P
Sbjct: 600 W--KGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGL-HEDLN-RIQNKPYT 655
Query: 340 GNGISSNQGP-----------------VFVDYVFGGQIASTVRCVECGHSSTVYEPFLDL 382
+ S+ P F+ +F GQ S + C C S ++PFL L
Sbjct: 656 -ETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 714
Query: 383 SLPVPTKK 390
+P+P K+
Sbjct: 715 PVPLPQKQ 722
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R+A+K++L+ + P +L + LKRFS + K+N V F ++L + G +
Sbjct: 1127 KQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCI-GQKE 1185
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y L V+ H G M GGHY A R N +++ VG W D V V
Sbjct: 1186 EQLPSYDLYAVINHYGGMIGGHYTACARL--PNDRSSQRSDVG--WRLFDDSTVTTVDES 1241
Query: 1028 EVLRCEAYILFYEK 1041
+V+ AY+LFY +
Sbjct: 1242 QVVTRYAYVLFYRR 1255
>sp|Q6GNI6|UB22A_XENLA Ubiquitin carboxyl-terminal hydrolase 22-A OS=Xenopus laevis
GN=usp22-a PE=2 SV=1
Length = 523
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 135/336 (40%), Gaps = 35/336 (10%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G+ L + CL C + C + H+ HA+ R
Sbjct: 32 GTPETRKRKAKSCICHMCGAHL---NRLHSCLYCVFFGC-------FTKKHIHEHAKNKR 81
Query: 140 HPLVIQWENPHLRWCFPCNTLIP---VEKTEENGENKDALSEVVKLIKGRSTEISSVDVE 196
H L I + +CF C I +E+ + + K +V + + V
Sbjct: 82 HNLAIDLLYGGI-YCFMCQDYIYDKDMEQVAKEEQRKAWKLQVFSPALVSPYQYTMTGVG 140
Query: 197 DAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQD 256
+ + E++ + N +RGL NLGNTCF N ++Q L L+D
Sbjct: 141 EKYSTWEPTKRELELLQHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRD 200
Query: 257 YFLN----AELTFGP---LTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQ 309
+FL+ E+ P L + LF E +G R+ P + + A GY+
Sbjct: 201 FFLSDRHKCEMQ-SPNSCLVCEMSTLFQEF--YSGHRSPHIPYRLLHLVWTHARHLAGYE 257
Query: 310 QHDSHELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRC 366
Q D+HE L LD L C + +K N+P+ N I +D +F G + S V C
Sbjct: 258 QQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCI--------IDQIFTGGLQSDVTC 309
Query: 367 VECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRA 402
C ST +PF D+SL +P P P S A
Sbjct: 310 QVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDA 345
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 388 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 446
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + H++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 447 QYQQPSDSLHNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 494
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 495 AIITKASIKDVLDSEGYLLFYHK 517
>sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana
GN=UBP8 PE=1 SV=2
Length = 871
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 48/194 (24%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFL-----------------NAELTFGPLTIA 271
+ GL NLGNTCF NS +Q L +L D+FL L FG L
Sbjct: 278 LTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDL--- 334
Query: 272 LKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAF 331
L+ L+A + + PR+F + APQF G+ QHDS ELL LLDGL E+L
Sbjct: 335 LRSLWAPGA------STVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGL-HEDLN- 386
Query: 332 RKRNSP----SEGNG--------------ISSNQGPVFVDYVFGGQIASTVRCVECGHSS 373
R +N P +G+G ++ N + VD V GQ ST+ C C S
Sbjct: 387 RVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDS-IIVD-VCQGQYKSTLVCPICKKVS 444
Query: 374 TVYEPFLDLSLPVP 387
+++PF+ LSLP+P
Sbjct: 445 VMFDPFMYLSLPLP 458
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 909 KVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTD 967
K R A K++ + + P IL IHLKRFS +R +KL +V+F + ++L Y+
Sbjct: 749 KEHRQAIKKLDLWRLPEILVIHLKRFSY-SRFMKNKLEAYVDFPLDNLDLSSYISYK-NG 806
Query: 968 HDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLE 1027
Y Y L + H G+M GGHY AYV G G WY D +V ++S E
Sbjct: 807 QTTYRYMLYAISNHYGSMGGGHYTAYVHHG------------GDRWYDFDDSHVHQISQE 854
Query: 1028 EVLRCEAYILFYEKI 1042
++ AY+LFY+++
Sbjct: 855 KIKTSAAYVLFYKRL 869
>sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana
GN=UBP5 PE=1 SV=2
Length = 924
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 93/190 (48%), Gaps = 42/190 (22%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYF---LNAELTF-------GPLTIA----LKK 274
+ GL NLGNTCF NS +Q L+ + YF + E+ + G L +A L+K
Sbjct: 316 LTGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGELALAFGDLLRK 375
Query: 275 LFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKR 334
L+A R I PR F + APQF GY QHDS ELL LLDGL E+L R +
Sbjct: 376 LWAPG------RTPIAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGL-HEDLN-RVK 427
Query: 335 NSP------SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVY 376
+ P ++G N I+ N + VD V GQ ST+ C C S +
Sbjct: 428 HKPYINSRDADGRPDEEVADEFWKNHIARNDS-IIVD-VCQGQYKSTLVCPICNKVSVTF 485
Query: 377 EPFLDLSLPV 386
+PF+ LSLP+
Sbjct: 486 DPFMYLSLPL 495
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 911 KRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS-EIINLRPYMDPGCTDHD 969
+R A+K++ + + P +L IHLKRFS +R KL VNF ++L Y+
Sbjct: 797 RRQASKKLDLWRLPEVLVIHLKRFSY-SRSMKHKLETFVNFPIHDLDLTKYVANKNLSQP 855
Query: 970 NYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEV 1029
Y L + H G M GHY A+++ ++ WY+ D ++ ++ ++V
Sbjct: 856 QL-YELYALTNHYGGMGSGHYTAHIKLLDDSR-----------WYNFDDSHISHINEDDV 903
Query: 1030 LRCEAYILFYEK 1041
AY+LFY +
Sbjct: 904 KSGAAYVLFYRR 915
>sp|A6H8I0|UBP22_DANRE Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio rerio GN=usp22
PE=2 SV=1
Length = 506
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 135/329 (41%), Gaps = 42/329 (12%)
Query: 80 GVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTR 139
G + R +K K G+ L + CL C + C + H+ HA+ R
Sbjct: 32 GSAETRKRKAKSCICHMCGAHL---NRLHSCLHCVFFGCFS-------KKHIHEHAKNKR 81
Query: 140 HPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVVKLIKGRSTEISSVDVEDAW 199
H L I + +CF C I + E+ + + + ++ I + + E
Sbjct: 82 HNLAIDLLYGGI-YCFVCQDYIYDKDMEQIAKEEQRKAWKLQGIGEKYSMWEPTKRELEL 140
Query: 200 FGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCFFNSVMQNLLAMSQLQDYFL 259
+I + T+ +RGL NLGNTCF N ++Q L L+D+FL
Sbjct: 141 LRHNPKRRKITANCTIG------------LRGLINLGNTCFMNCIVQALTHTPLLRDFFL 188
Query: 260 N----AEL-TFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICSKAPQFKGYQQHDSH 314
+ E+ + L + +LF E +G R+ P + + A GY+Q D+H
Sbjct: 189 SDRHKCEMQSNSCLVCEMSQLFQEF--YSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAH 246
Query: 315 ELLRCLLDGL---CSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQIASTVRCVECGH 371
E L LD L C ++ +K N+P+ N I +D +F G + S V C C
Sbjct: 247 EFLIAALDVLHRHCKDDNG-KKANNPNHCNCI--------IDQIFTGGLQSDVTCQVCHG 297
Query: 372 SSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
ST +PF D+SL +P P P S
Sbjct: 298 VSTTIDPFWDISLDLPGSSTPFWPLSPGS 326
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + + P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 371 QESTKQLTMKRLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 429
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY ++R W+ D
Sbjct: 430 QYQQPVDSLNNDNKYSLFAVVNHQGTLESGHYTTFIRQHKDQ------------WFKCDD 477
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 478 AIITKASIKDVLDSEGYLLFYHK 500
>sp|P0C8Z3|UBP22_BOVIN Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22
PE=2 SV=1
Length = 514
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 122/302 (40%), Gaps = 39/302 (12%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I+ + +CF C I + E
Sbjct: 65 CLHCVFFGC-------FTKKHIHEHAKSKRHNLAIELMYGGI-YCFLCQDYIYDKDIEII 116
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 117 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 164
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 165 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 222
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 223 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 282
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 283 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 334
Query: 401 RA 402
+
Sbjct: 335 ES 336
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 379 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 437
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 438 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 485
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+ +VL E Y+LFY K
Sbjct: 486 AIITKASIADVLDSEGYLLFYHK 508
>sp|Q9UPT9|UBP22_HUMAN Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22
PE=1 SV=2
Length = 525
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 76 CLYCVFFGC-------FTKKHIHEHAKAKRHNLAIDLMYGGI-YCFLCQDYIYDKDMEII 127
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 128 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 175
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 176 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 233
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 234 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 293
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 294 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 497 AIITKASIKDVLDSEGYLLFYHK 519
>sp|Q5DU02|UBP22_MOUSE Ubiquitin carboxyl-terminal hydrolase 22 OS=Mus musculus GN=Usp22
PE=2 SV=2
Length = 525
Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 110 CLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEEN 169
CL C + C + H+ HA+ RH L I + +CF C I + E
Sbjct: 76 CLYCVFFGC-------FTKKHIHDHAKSKRHNLAIDLMYGGI-YCFLCQDYIYDKDIEII 127
Query: 170 GENKDALSEVVKLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVV 229
+ + + ++ + + + E +I S T+ +
Sbjct: 128 AKEEQRKAWKMQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIG------------L 175
Query: 230 RGLANLGNTCFFNSVMQNLLAMSQLQDYFLN------AELTFGPLTIALKKLFAETKPET 283
RGL NLGNTCF N ++Q L L+D+FL+ + L + LF E +
Sbjct: 176 RGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFY--S 233
Query: 284 GLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGL---CSEELAFRKRNSPSEG 340
G R+ P + + A GY+Q D+HE L LD L C + +K N+P+
Sbjct: 234 GHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHC 293
Query: 341 NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPAS 400
N I +D +F G + S V C C ST +PF D+SL +P P P S
Sbjct: 294 NCI--------IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGS 345
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYM---------- 961
+++TK++ + K P + HLKRF A+ R K+ +V+F +++ P+M
Sbjct: 390 QESTKQLTMKKLPIVACFHLKRFEHSAKLR-RKITTYVSFPLELDMTPFMASSKESRMNG 448
Query: 962 ---DPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASD 1018
P + +++ Y L VV H GT+ GHY +++R W+ D
Sbjct: 449 QYQQPLDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQ------------WFKCDD 496
Query: 1019 VYVREVSLEEVLRCEAYILFYEK 1041
+ + S+++VL E Y+LFY K
Sbjct: 497 AIITKASIKDVLDSEGYLLFYHK 519
>sp|D2HBJ8|UBP44_AILME Ubiquitin carboxyl-terminal hydrolase 44 OS=Ailuropoda melanoleuca
GN=USP44 PE=3 SV=1
Length = 711
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 75/156 (48%), Gaps = 26/156 (16%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
C+ SK +SK V V +A K+++I P +L +HLKRF R K+ HV F
Sbjct: 536 CDHCNSKRRRFSSKSV-VLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFE 594
Query: 953 EIINLRPY--------MDPGCTDHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVK 1003
EI+N+ PY + P C + Y L VV H G G GHY AY
Sbjct: 595 EILNMEPYCCRESLKSLRPEC-----FIYDLSAVVMHHGKGFGSGHYTAYCYN------- 642
Query: 1004 AKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
S GG W H +D + +++EV + +AYILFY
Sbjct: 643 ----SEGGFWVHCNDSKLSMCTMDEVCKAQAYILFY 674
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+G +++P + + P F+GY Q D+ E L LLD + EL P+
Sbjct: 393 SGKWALVSPFAMLHSVWRLIPAFRGYAQQDAQEFLCELLDKI-QHELETTGTRLPA---L 448
Query: 343 ISSNQGPVF------VDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTK 389
I ++Q + V+ +F GQ+ S V C+ C + S EPF DLSL P +
Sbjct: 449 IPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIEPFWDLSLEFPER 501
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLI 161
+++IW CL C H ACG + H ++H +++ HP+ ++ N +C+ C+ +
Sbjct: 35 TESIWACLSCSHVACGRY-----IEEHALKHFQESSHPVALE-VNEMYVFCYLCDDYV 86
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL 263
V GL NLGNTC+ NSV+Q L + + FL +L
Sbjct: 271 VTGLRNLGNTCYMNSVLQVLSHLLIFRQCFLKLDL 305
>sp|Q9H0E7|UBP44_HUMAN Ubiquitin carboxyl-terminal hydrolase 44 OS=Homo sapiens GN=USP44
PE=1 SV=2
Length = 712
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 75/156 (48%), Gaps = 26/156 (16%)
Query: 893 CESEESKVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFS 952
C+ SK +SK V V +A K+++I P +L +HLKRF R K+ HV F
Sbjct: 537 CDQCNSKRRRFSSKPV-VLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFE 595
Query: 953 EIINLRPY--------MDPGCTDHDNYDYRLVGVVEHLGTMRG-GHYVAYVRGGPKNKVK 1003
EI+N+ PY + P C + Y L VV H G G GHY AY
Sbjct: 596 EILNMEPYCCRETLKSLRPEC-----FIYDLSAVVMHHGKGFGSGHYTAYCYN------- 643
Query: 1004 AKKESVGGVWYHASDVYVREVSLEEVLRCEAYILFY 1039
S GG W H +D + +++EV + +AYILFY
Sbjct: 644 ----SEGGFWVHCNDSKLSMCTMDEVCKAQAYILFY 675
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 283 TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNG 342
+G +++P + + P F+GY Q D+ E L LLD + EL + P+
Sbjct: 394 SGKWALVSPFAMLHSVWRLIPAFRGYAQQDAQEFLCELLDKI-QRELETTGTSLPA---L 449
Query: 343 ISSNQGPVF------VDYVFGGQIASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKK 395
I ++Q + V+ +F GQ+ S V C+ C + S EPF DLSL P + S K
Sbjct: 450 IPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIEPFWDLSLEFPERYQCSGK 508
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 104 SKAIWVCLGCGHYACGGVGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLI 161
+++IW CL C H ACG + H ++H +++ HP+ ++ N +C+ C+ +
Sbjct: 35 TESIWACLSCSHVACGRY-----IEEHALKHFQESSHPVALE-VNEMYVFCYLCDDYV 86
Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 229 VRGLANLGNTCFFNSVMQNLLAMSQLQDYFLNAEL 263
V GL NLGNTC+ NSV+Q L + + FL +L
Sbjct: 272 VTGLRNLGNTCYMNSVLQVLSHLLIFRQCFLKLDL 306
>sp|P35125|UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6
PE=1 SV=2
Length = 1406
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 31/184 (16%)
Query: 231 GLANLGNTCFFNSVMQNLLAMSQLQDYFLNAELTF-----GPLTIA--LKKLFAETKPE- 282
GL+NLGNTCF NS +Q + L YF++ + P+ + + K + + E
Sbjct: 533 GLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQEL 592
Query: 283 -TGLRNVINPRSFFGCICSKAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSP---- 337
+G + + P I AP+F G+QQ DS ELL LLDGL E+L R P
Sbjct: 593 WSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGL-HEDLN-RVHEKPYVEL 650
Query: 338 --SEG------------NGISSNQGPVFVDYVFGGQIASTVRCVECGHSSTVYEPFLDLS 383
S+G N + N+ + VD +F GQ+ S V+C CGH S ++PF LS
Sbjct: 651 KDSDGRPDWEVAAEAWDNHLRRNRS-IIVD-LFHGQLRSQVKCKTCGHISVRFDPFNFLS 708
Query: 384 LPVP 387
LP+P
Sbjct: 709 LPLP 712
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 973 YRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVYVREVSLEEVLRC 1032
Y L + H G + GGHY+ Y + P K WY +D E+ +E+
Sbjct: 1312 YNLYAISCHSGILSGGHYITYAK-NPNCK-----------WYCYNDSSCEELHPDEIDTD 1359
Query: 1033 EAYILFYEK 1041
AYILFYE+
Sbjct: 1360 SAYILFYEQ 1368
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 839 AVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEES 898
AV+ + LR SQE + D+ E SV+ + + AE + DS L A E E
Sbjct: 994 AVDWHPTALHLRYQTSQERVVDKHE---SVEQSRRA--QAEPI-NLDSCLRAFTSEEELG 1047
Query: 899 KVEEINSKIVKVKRDATKRVLINKAPPILTIHLKRF 934
+ E K ATK++ + + PP L IHLKRF
Sbjct: 1048 ESEMYYCSKCKTHCLATKKLDLWRLPPFLIIHLKRF 1083
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 401,234,303
Number of Sequences: 539616
Number of extensions: 18147888
Number of successful extensions: 50005
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 268
Number of HSP's that attempted gapping in prelim test: 44635
Number of HSP's gapped (non-prelim): 2065
length of query: 1042
length of database: 191,569,459
effective HSP length: 128
effective length of query: 914
effective length of database: 122,498,611
effective search space: 111963730454
effective search space used: 111963730454
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)