BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001628
(1042 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WU70|STXB5_RAT Syntaxin-binding protein 5 OS=Rattus norvegicus GN=Stxbp5 PE=1 SV=1
Length = 1152
Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 34 HYGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLENQG 93
+GFP + A+DP+QKILA T+ G ++L+GR + + + LQFL N+G
Sbjct: 54 RHGFPYQPSALAFDPVQKILAVGTQTGALRLFGR-PGVECYCQHDSGAAVIQLQFLINEG 112
Query: 94 ILLNVTSTNLIEVWDIDKKRLSHVH---VCKEEITSFTIMQHSNYMLLGDTAGKISVLKL 150
L++ + + + +W++ +KR + +H C+E +T + S ++ +G G I ++ +
Sbjct: 113 ALVSALADDTLHLWNLRQKRPAVLHSLKFCRERVTFCHLPFQSKWLYVGTERGNIHIVNV 172
Query: 151 DQ--ESSQIVKMKYIIPLSA-SHGNEVSGDPAVINILPQPTAESKRILIIFRDGLISLWD 207
+ S ++ I LS+ SH V++I P E K +LI F G + LWD
Sbjct: 173 ESFTLSGYVIMWNKAIELSSKSHPG------PVVHISDNPMDEGK-LLIGFESGTVVLWD 225
Query: 208 IRESKSIFSMGGNVLQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIWGVPS 261
++ K+ + Y + + S W G + +S+G + IW V S
Sbjct: 226 LKSKKADYR---------YTYDEAIHSVAWHHE-GKQFICSHSDGTLTIWNVRS 269
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 451 GSQSHSKVKNLFITGHSDGAINFWDVSCPLFLLILSLK 488
G+QS+ ++ ITGH+DG+I FWD S ++ LK
Sbjct: 444 GAQSYPEI---IITGHADGSIKFWDASAITLQVLYKLK 478
>sp|Q5T5C0|STXB5_HUMAN Syntaxin-binding protein 5 OS=Homo sapiens GN=STXBP5 PE=1 SV=1
Length = 1151
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 34 HYGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLENQG 93
+GFP + A+DP+QKILA T+ G ++L+GR + + + LQFL N+G
Sbjct: 53 RHGFPYQPSALAFDPVQKILAVGTQTGALRLFGR-PGVECYCQHDSGAAVIQLQFLINEG 111
Query: 94 ILLNVTSTNLIEVWDIDKKRLSHVH---VCKEEITSFTIMQHSNYMLLGDTAGKISVLKL 150
L++ + + + +W++ +KR + +H C+E +T + S ++ +G G I ++ +
Sbjct: 112 ALVSALADDTLHLWNLRQKRPAILHSLKFCRERVTFCHLPFQSKWLYVGTERGNIHIVNV 171
Query: 151 DQ--ESSQIVKMKYIIPLSA-SHGNEVSGDPAVINILPQPTAESKRILIIFRDGLISLWD 207
+ S ++ I LS+ SH V++I P E K +LI F G + LWD
Sbjct: 172 ESFTLSGYVIMWNKAIELSSKSHPG------PVVHISDNPMDEGK-LLIGFESGTVVLWD 224
Query: 208 IRESKSIFSMGGNVLQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIWGVPS 261
++ K+ + Y + + S W G + +S+G + IW V S
Sbjct: 225 LKSKKADYR---------YTYDEAIHSVAWHHE-GKQFICSHSDGTLTIWNVRS 268
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 451 GSQSHSKVKNLFITGHSDGAINFWDVSCPLFLLILSLK 488
G+QS+ ++ ITGH+DG++ FWD S ++ LK
Sbjct: 443 GAQSYPEI---IITGHADGSVKFWDASAITLQVLYKLK 477
>sp|Q8K400|STXB5_MOUSE Syntaxin-binding protein 5 OS=Mus musculus GN=Stxbp5 PE=1 SV=3
Length = 1152
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 34 HYGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLENQG 93
+GFP + A+DP+QKILA T+ G ++L+GR + + + LQFL N+G
Sbjct: 54 RHGFPYQPSALAFDPVQKILAVGTQTGALRLFGR-PGVECYCQHDSGAAVIQLQFLINEG 112
Query: 94 ILLNVTSTNLIEVWDIDKKRLSHVH---VCKEEITSFTIMQHSNYMLLGDTAGKISVLKL 150
L++ + + + +W++ +KR + +H C+E +T + S ++ +G G I ++ +
Sbjct: 113 ALVSALADDTLHLWNLRQKRPAVLHSLKFCRERVTFCHLPFQSKWLYVGTERGNIHIVNV 172
Query: 151 DQ--ESSQIVKMKYIIPLSA-SHGNEVSGDPAVINILPQPTAESKRILIIFRDGLISLWD 207
+ S ++ I LS+ +H V++I P E K +LI F G + LWD
Sbjct: 173 ESFTLSGYVIMWNKAIELSSKAHPG------PVVHISDNPMDEGK-LLIGFESGTVVLWD 225
Query: 208 IRESKSIFSMGGNVLQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIWGVPS 261
++ K+ + Y + + S W G + +S+G + IW V S
Sbjct: 226 LKSKKADYR---------YTYDEAIHSVAWHHE-GKQFICSHSDGTLTIWNVRS 269
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 451 GSQSHSKVKNLFITGHSDGAINFWDVSCPLFLLILSLK 488
G+QS+ ++ ITGH+DG++ FWD S ++ LK
Sbjct: 444 GAQSYPEI---IITGHADGSVKFWDASAITLQVLYKLK 478
>sp|Q5DQR4|STB5L_MOUSE Syntaxin-binding protein 5-like OS=Mus musculus GN=Stxbp5l PE=1
SV=1
Length = 1185
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 30/260 (11%)
Query: 15 PGGSSDGLKSSDVDPRLVFHY---------GFPSGCNKFAYDPLQKILAAATKDGRIKLY 65
PGG++ GL ++ L Y GFP A+DP+QKILA T+ G I++
Sbjct: 38 PGGTA-GLPREEIQESLTSDYFQICKTVRHGFPYQPTALAFDPVQKILAIGTRTGAIRIL 96
Query: 66 GRHN-NTQALLESSEAVSTKFLQFLENQGILLNVTSTNLIEVWDIDKKRLSHVHVCK--- 121
GR + ES AV LQFL N+G L++ +S + + +W++ +KR + +H K
Sbjct: 97 GRPGVDCYCQHESGAAVLQ--LQFLINEGALVSASSDDTLHLWNLRQKRPAILHSLKFNR 154
Query: 122 EEITSFTIMQHSNYMLLGDTAGKISVLKLDQESSQIVKMKYIIPLSASHGNEVSGDPAVI 181
E IT + S ++ +G G ++ ++ + Y+I + + P +
Sbjct: 155 ERITYCHLPFQSKWLYVGTERGNTHIVNIE----SFILSGYVIMWNKAIELSTKTHPGPV 210
Query: 182 NILPQPTAESKRILIIFRDGLISLWDIRESKSIFSMGGNVLQSVYHETKQVTSACWACPI 241
L + ++LI + +G + WD++ ++ VY++ + + S W
Sbjct: 211 VHLSDSPRDEGKLLIGYENGTVVFWDLKSKRAEL--------RVYYD-EAIHSIDWHHE- 260
Query: 242 GSKVAVGYSNGEILIWGVPS 261
G + +S+G + +W + S
Sbjct: 261 GKQFMCSHSDGSLTLWNLKS 280
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 16/91 (17%)
Query: 451 GSQSHSKVKNLFITGHSDGAINFWDVSCPLFLLILSLKQQS--EKDFSLSG--------- 499
G+Q++ ++ ITGH+DG I FWD S ++ LK EK + G
Sbjct: 455 GAQTYPEI---IITGHADGTIKFWDASAMTLQMLYKLKTSKVFEKQKAGEGKQTCELVEE 511
Query: 500 --IPLTALYYDGTSRVLVSGDQSGMVRIFKL 528
+ +Y+ SR+ S V I+K
Sbjct: 512 DPFAVQMIYWCPESRIFCVSGVSAYVIIYKF 542
>sp|Q9Y2K9|STB5L_HUMAN Syntaxin-binding protein 5-like OS=Homo sapiens GN=STXBP5L PE=2
SV=2
Length = 1186
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 20/231 (8%)
Query: 35 YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHN-NTQALLESSEAVSTKFLQFLENQG 93
+GFP A+DP+QKILA T+ G I++ GR + ES AV LQFL N+G
Sbjct: 67 HGFPHQPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQ--LQFLINEG 124
Query: 94 ILLNVTSTNLIEVWDIDKKRLSHVHVCK---EEITSFTIMQHSNYMLLGDTAGKISVLKL 150
L++ +S + + +W++ +KR + +H K E IT + S ++ +G G ++ +
Sbjct: 125 ALVSASSDDTLHLWNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYVGTERGNTHIVNI 184
Query: 151 DQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQPTAESKRILIIFRDGLISLWDIRE 210
+ + Y+I + + P + L + ++LI + +G + WD++
Sbjct: 185 E----SFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWDLKS 240
Query: 211 SKSIFSMGGNVLQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIWGVPS 261
++ VY++ + + S W G + +S+G + +W + S
Sbjct: 241 KRAEL--------RVYYD-EAIHSIDWHHE-GKQFMCSHSDGSLTLWNLKS 281
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 18/105 (17%)
Query: 451 GSQSHSKVKNLFITGHSDGAINFWDVSCPLFLLILSLK-------------QQSEKDFSL 497
G+Q++ ++ ITGH+DG+I FWD S ++ LK +Q+ +
Sbjct: 456 GAQTYPEI---IITGHADGSIKFWDASAITLQMLYKLKTSKVFEKQKVGEGKQTCEIVEE 512
Query: 498 SGIPLTALYYDGTSRVLVSGDQSGMVRIFKLKYEPHAIENSFLSF 542
+ +Y+ SR+ S V I+ K+ H I +S
Sbjct: 513 DPFAIQMIYWCPESRIFCVSGVSAYVIIY--KFSRHEITTEIVSL 555
>sp|Q5SQE2|STB5L_DANRE Syntaxin-binding protein 5-like OS=Danio rerio GN=stxbp5l PE=3 SV=1
Length = 1159
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 28/235 (11%)
Query: 35 YGFPSGCNKFAYDPLQKILAAATKDGRIKLY--------GRHN-NTQALLESSEAVSTKF 85
+GFP A+DP+QKILA ++ G I++Y GR + + ES AV
Sbjct: 60 HGFPYQPTALAFDPVQKILAIGSRSGGIRMYPFLSFPHLGRPGVDCHSQHESGAAVLQ-- 117
Query: 86 LQFLENQGILLNVTSTNLIEVWDIDKKRLSHVHVCK---EEITSFTIMQHSNYMLLGDTA 142
+QFL N+G L+ + + + +W + ++ + +H K E IT + S ++ +G
Sbjct: 118 MQFLINEGALVTACADDTLHLWSLRQRLPAILHSLKFNRERITFCHLPFQSKWLYVGTER 177
Query: 143 GKISVLKLDQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQPTAESKRILIIFRDGL 202
G ++ ++ + Y+I + + P + L + ++LI F G
Sbjct: 178 GNTHIVNIE----SFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGT 233
Query: 203 ISLWDIRESKSIFSMGGNVLQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIW 257
I +WD+R ++ F +Y++ + + S W G + +S+G + +W
Sbjct: 234 IVMWDLRAKRADF--------RIYYD-EAIHSVSWHHE-GRQFMCSHSDGSLSMW 278
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 451 GSQSHSKVKNLFITGHSDGAINFWDVSCPLFLLILSLK 488
GSQ++ ++ ITGH+DG+I FWD + ++ LK
Sbjct: 457 GSQTYPEI---IITGHADGSIKFWDATAITLQMLYKLK 491
>sp|Q3TJ91|L2GL2_MOUSE Lethal(2) giant larvae protein homolog 2 OS=Mus musculus GN=Llgl2
PE=2 SV=2
Length = 1027
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 186/501 (37%), Gaps = 114/501 (22%)
Query: 35 YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGR--------HNNTQALLESSEAVSTKFL 86
+GFP + Y P +ILA T+ G +KLYG H A+L+ +
Sbjct: 29 HGFPHQPSALGYSPSLRILAIGTRSGAVKLYGAPGVEFMGLHKENNAVLQ---------I 79
Query: 87 QFLENQGILLNVTSTNLIEVWDIDKKRLSHVHVCKEEITSFT----------------IM 130
FL Q L+ + N + +W + K V +EE SFT I+
Sbjct: 80 HFLPGQCQLVTLLDDNSLHLWSLKVK--GGVSELQEE-ESFTLRGPPGAAPSATQVTEIL 136
Query: 131 QHSN--YMLLGDTAGKISVLKL-------DQESSQIVKMKYIIPLSASHGNEVSGDPAVI 181
HS+ + LG +G + V++L D+ +++ +P A H ++
Sbjct: 137 PHSSGELLYLGTESGNVFVVQLPGFRTLHDRTICSDEVLQW-LPEEARHRRVFE----MV 191
Query: 182 NILPQPTAESKRILIIFRDGLISLWDIRESKSIFSMGGNVLQSVYHETKQVTSACWACPI 241
L + + +ILI + GL+ +WD++ S+++ S + ++Q+ +A W
Sbjct: 192 EALQEHPRDPNQILIGYSRGLVVIWDLQGSRAL---------SHFLSSQQLENASWQRD- 241
Query: 242 GSKVAVGYSNGEILIWGVPS-ILNLKTEECGTQITPI-CKLNLGYKLDKIPISSLKWVYA 299
G + +S+G W V S N + P CK I+ + W+
Sbjct: 242 GCLIVTCHSDGSHCQWPVSSDTQNPEPLRSSIPYGPFPCKA----------ITKIFWLTT 291
Query: 300 DGKASRLYIMGA---SDFVSMNLLQIVLLNEQTESRTTKLALPLSEPCIDMEIISSSSDP 356
G + + + + +V +QT A + ID ++ S +DP
Sbjct: 292 RQGLPFTIFQGGMPRASYGDRHCISVVHNGQQT-------AFDFTSRVIDFTVL-SEADP 343
Query: 357 NKPKQDSFLLLGKSGHFYAFDDCQIERYLLQYQSRSPPSAPKEVMLKMPFLDS------- 409
D + L+ + D Q + PP +++P+L S
Sbjct: 344 AAAFDDPYALVVLAEEELVVIDLQTPGW--------PP-------VQLPYLASLHCSAIT 388
Query: 410 ---SITAMKLITGNSFILSSADEDYSLLAKSVPPLLDFETKLKDGSQSHSKVKNLFITGH 466
++ + L I + + ++ P +D T L ++L +TGH
Sbjct: 389 CSHHVSNIPLKLWERIIAAGSRQNSHFSTMEWP--IDGGTSLAPPPPQ----RDLLLTGH 442
Query: 467 SDGAINFWDVSCPLFLLILSL 487
DG + FWD S L+ L
Sbjct: 443 EDGTVRFWDASGVCLRLLYKL 463
>sp|Q08470|L2GL_DROPS Protein lethal(2) giant larvae OS=Drosophila pseudoobscura
pseudoobscura GN=l(2)gl PE=1 SV=3
Length = 1166
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 30 RLVFHYGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHN----NTQALLESSEA-VSTK 84
R +GFP + AYDP+ K++A T+ G IK++G+ L+ +S A ++ +
Sbjct: 27 RKTAQHGFPHKPSALAYDPVAKLMAIGTQTGAIKVFGQPGVELYAQHTLVNNSAAELNVQ 86
Query: 85 FLQFLENQGILLNVTSTNLIEVWDIDKKRLSHVHVCK-----EEITSFTIMQHSNYMLLG 139
L+++ G +L++T+ N + +W+ L + ++++S + + + +G
Sbjct: 87 LLEWVYGTGRILSLTAANQLILWEPVGTTLVPIKTLPFDGKLKKVSSLCCSLNKDLLWIG 146
Query: 140 DTAGKISVLKLDQESSQI--------VKMKYIIPLSASHGNEVSGDPAVINILPQPTAES 191
G I +LD +S I V ++ + P +P I + Q
Sbjct: 147 TEGGNI--YQLDLKSFTIREPVIYHDVVLEQVPP-------TYKLNPGAIESIRQLPNSL 197
Query: 192 KRILIIFRDGLISLWDIRES 211
++LI + GL LWD++ S
Sbjct: 198 NKLLIAYNRGLCVLWDMQTS 217
>sp|Q7SZE3|L2GL2_DANRE Lethal(2) giant larvae protein homolog 2 OS=Danio rerio GN=llgl2
PE=1 SV=1
Length = 1020
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 44/250 (17%)
Query: 35 YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLENQGI 94
+GFP + + P ++LA T+ G IKLYG L A T+ + FL NQ
Sbjct: 29 HGFPHQPSALGFSPSLELLAIGTRSGAIKLYGAPGVEFMGLHDENAAVTQ-VHFLPNQVE 87
Query: 95 LLNVTSTNLIEVWDIDKKRLSHVHVCK-EEITSFT----------------IMQHSN--Y 135
L+ + N + +W + +H +C+ EI FT ++ HS+
Sbjct: 88 LVTLLEDNSLHMWTLR----AHNSMCELLEIGRFTLSGPPGAIPSVTRVTAVLAHSSGEL 143
Query: 136 MLLGDTAGKISVL------KLDQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQPTA 189
+LLG G + V+ +L++ + + ++ +P + + L +
Sbjct: 144 LLLGTEGGHVFVVEVPGFRELEENNISVEDVQNRVPEDYVGRRNLES----VETLHENPL 199
Query: 190 ESKRILIIFRDGLISLWDIRESKSIFSMGGNVLQSVYHETKQVTSACWACPIGSKVAVGY 249
+++LI + GL+ LWD+ + + G T+Q+ S W G + +
Sbjct: 200 NPRQVLIGYSRGLMVLWDLDRQRPVQHFLG---------TQQLESVWW-MEDGESILSSH 249
Query: 250 SNGEILIWGV 259
S+G W V
Sbjct: 250 SDGSYCQWTV 259
>sp|P08111|L2GL_DROME Lethal(2) giant larvae protein OS=Drosophila melanogaster GN=l(2)gl
PE=1 SV=2
Length = 1161
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 30 RLVFHYGFPSGCNKFAYDPLQKILAAATKDGRIK--------LYGRHNNTQALLESSEAV 81
R +GFP + AYDP+ K++A T+ G +K LYG+H L S+ +
Sbjct: 27 RKTAQHGFPHKPSALAYDPVLKLMAIGTQTGALKVFGQPGVELYGQHT---LLNNSASEL 83
Query: 82 STKFLQFLENQGILLNVTSTNLIEVWDIDKKRLSHVHVCK-----EEITSFTIMQHSNYM 136
+ + L+++ G +L++T+ N + +W+ L + ++++S + +
Sbjct: 84 NVQLLEWVYGTGRILSLTAANQLILWEPVGATLLPIKTLPFDGKLKKVSSLCCSLSKDLL 143
Query: 137 LLGDTAGKISVLKLDQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQPTAESKRILI 196
+G G I L L + + + + + L A+ +I P + SK +L+
Sbjct: 144 WIGTEGGNIYQLDLHTFTIKEPVIYHDVVLEQVPPAYKLNPGAIESIRQLPNSPSK-LLV 202
Query: 197 IFRDGLISLWDIRESKSI 214
+ GL LWD ES S+
Sbjct: 203 AYNRGLCVLWDF-ESASV 219
Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 456 SKVKNLFITGHSDGAINFWDVSCPLFLLILSLKQQ----SEKDF 495
+K+ + +TGH DG++ FWD + L I + K SE DF
Sbjct: 432 TKLYEILLTGHEDGSVKFWDCTGVLLKPIYNFKTSSIFGSESDF 475
>sp|Q8K4K5|L2GL1_RAT Lethal(2) giant larvae protein homolog 1 OS=Rattus norvegicus
GN=Llgl1 PE=1 SV=1
Length = 1036
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 48/258 (18%)
Query: 31 LVFH----YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFL 86
FH +GFP+ + A+DP +I+A T+ G +K+YG L A T+ +
Sbjct: 23 FTFHKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAPGVEFTGLHRDAATVTQ-M 81
Query: 87 QFLENQGILLNVTSTNLIEVWDIDKKR-LSHVHVCKEEITSFTIMQHSNYMLLGDTAG-- 143
FL QG LL + + + +W+I ++ +H+ EE SF ++ AG
Sbjct: 82 HFLPGQGRLLTLLDDSSLHLWEIIQRNGCAHL----EEGLSFHPPSRPSFGNASFPAGLT 137
Query: 144 KISV--------LKLDQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQ--------- 186
+++V + L ES I + + L+ G +S D V+ +P
Sbjct: 138 RVTVVLLAAGDTVVLGTESGSIFFLD-VATLALLEGQTLSPD-EVLRSVPDDYRCGKALG 195
Query: 187 PT-------AESKRILIIFRDGLISLWDIRESKSIFSMGGNVLQSVYHETKQVTSACWAC 239
P + +ILI + GL+ +W S ++ V+ +Q+ S CW
Sbjct: 196 PVESLQGHLQDPSKILIGYSRGLLVIW---------SQATQSVEHVFLGNQQLESLCWGR 246
Query: 240 PIGSKVAVGYSNGEILIW 257
GS + +S+G IW
Sbjct: 247 -GGSNIISSHSDGSYAIW 263
>sp|Q8MKF0|L2GL1_BOVIN Lethal(2) giant larvae protein homolog 1 OS=Bos taurus GN=LLGL1
PE=2 SV=1
Length = 1036
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 48/258 (18%)
Query: 31 LVFH----YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFL 86
FH +GFP+ + A+DP +I+A T+ G +K+YG L A T+ +
Sbjct: 23 FAFHKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAPGVEFTGLHRDAATVTQ-M 81
Query: 87 QFLENQGILLNVTSTNLIEVWDIDKKR-LSHVHVCKEEITSFTIMQHSNYMLLGDTAG-- 143
FL QG LL + + + +W+I ++ +H+ EE SF ++ AG
Sbjct: 82 HFLPGQGRLLTLLDDSSLHLWEIIQRNGCAHL----EEGLSFHPPSRPSFDNASFPAGLT 137
Query: 144 KISV--------LKLDQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQ--------- 186
+++V + L ES I + + L+ G +S D V+ +P
Sbjct: 138 RVTVVLLAAGDTVVLGTESGSIFFLD-VATLALLEGQTLSPD-EVLRSVPDDYRCGKALG 195
Query: 187 PT-------AESKRILIIFRDGLISLWDIRESKSIFSMGGNVLQSVYHETKQVTSACWAC 239
P + +ILI + GL+ +W S ++ V+ +Q+ S CW
Sbjct: 196 PVESLQGHLQDPSKILIGYSRGLLVIW---------SQATQSVEHVFLGNQQLESLCWG- 245
Query: 240 PIGSKVAVGYSNGEILIW 257
GS + +S+G IW
Sbjct: 246 RGGSNIISSHSDGSYAIW 263
>sp|Q80Y17|L2GL1_MOUSE Lethal(2) giant larvae protein homolog 1 OS=Mus musculus GN=Llgl1
PE=1 SV=1
Length = 1036
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 62/265 (23%)
Query: 31 LVFH----YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFL 86
FH +GFP+ + A+DP +I+A T+ G +K+YG L A T+ +
Sbjct: 23 FAFHKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAPGVEFTGLHRDAATVTQ-M 81
Query: 87 QFLENQGILLNVTSTNLIEVWDIDKKRLSHVHVCK--EEITSFTIMQHSNY--------- 135
FL QG LL + + + +W+I H + C EE SF ++
Sbjct: 82 HFLPGQGRLLTLLDDSSLHLWEI-----IHHNGCAHLEEGLSFHPPSRPSFDNASFPASL 136
Query: 136 -------MLLGDTAGKISVLKLDQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQ-- 186
++ G+TA L ES I + + L+ G +S D V+ +P
Sbjct: 137 TRVTVVLLVAGNTAA------LGTESGSIFFLD-VATLALLEGQTLSPD-VVLRSVPDDY 188
Query: 187 -------PT-------AESKRILIIFRDGLISLWDIRESKSIFSMGGNVLQSVYHETKQV 232
P + +ILI + GL+ +W S + +V+ +Q+
Sbjct: 189 RCGKALGPVESLQGHLQDPSKILIGYSRGLLVIW---------SQATQSVDNVFLGNQQL 239
Query: 233 TSACWACPIGSKVAVGYSNGEILIW 257
S CW GS + +S+G IW
Sbjct: 240 ESLCWGR-DGSSIISSHSDGSYAIW 263
>sp|Q6P1M3|L2GL2_HUMAN Lethal(2) giant larvae protein homolog 2 OS=Homo sapiens GN=LLGL2
PE=1 SV=2
Length = 1020
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 35 YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHN-NTQALLESSEAVSTKFLQFLENQG 93
+GFP + Y P +ILA T+ G IKLYG L + + AV+ + L Q
Sbjct: 29 HGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHQENNAVTQ--IHLLPGQC 86
Query: 94 ILLNVTSTNLIEVWDIDKKRLSHVHVCKEEITSFT----------------IMQHSN--Y 135
L+ + N + +W + K + +E SFT ++ HS+
Sbjct: 87 QLVTLLDDNSLHLWSLKVKGGASE---LQEDESFTLRGPPGAAPSATQITVVLPHSSCEL 143
Query: 136 MLLGDTAGKISVLKL-------DQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQPT 188
+ LG +G + V++L D+ S ++ +P A H ++ L +
Sbjct: 144 LYLGTESGNVFVVQLPAFRALEDRTISSDAVLQR-LPEEARHRRVFE----MVEALQEHP 198
Query: 189 AESKRILIIFRDGLISLWDIRESKSIF 215
+ +ILI + GL+ +WD++ S+ ++
Sbjct: 199 RDPNQILIGYSRGLVVIWDLQGSRVLY 225
>sp|Q5RCX2|L2GL2_PONAB Lethal(2) giant larvae protein homolog 2 OS=Pongo abelii GN=LLGL2
PE=2 SV=1
Length = 1019
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 36/207 (17%)
Query: 35 YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHN-NTQALLESSEAVSTKFLQFLENQG 93
+GFP + Y P +ILA T+ G IKLYG L + AV+ + L Q
Sbjct: 29 HGFPHQPSALGYSPSLRILAIGTRSGAIKLYGAPGVEFMGLHRENNAVTQ--IHLLPGQC 86
Query: 94 ILLNVTSTNLIEVWDIDKKRLSHVHVCKEEITSFT----------------IMQHSN--Y 135
L+ + N + +W + K + +E SFT ++ HS+
Sbjct: 87 QLVTLLDDNSLHLWSLKVKGGASE---LQEDESFTLRGPPGAAPSATQITVVLPHSSCEL 143
Query: 136 MLLGDTAGKISVLKL-------DQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQPT 188
+ LG +G + V++L D+ S ++ +P A H ++ L +
Sbjct: 144 LYLGTESGNVFVVQLPAFRALEDRTISSDAVLQR-LPEEARHRRVFE----MVEALQEHP 198
Query: 189 AESKRILIIFRDGLISLWDIRESKSIF 215
+ +ILI + GL+ +WD++ S+ ++
Sbjct: 199 RDPNQILIGYSRGLVVIWDLQGSRVLY 225
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3
SV=1
Length = 1221
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 5 TLVEKASMKKPGGSSDGLKSSDVDPRLVFHYGFPSGCNKFAYDPLQKILAAATKDGRIKL 64
T V+ P D L +D+ RL G G N ++ P Q + +A+ D ++KL
Sbjct: 172 TTVKPYRENDPMRLQDELFGTDISVRLSLE-GHDRGVNWASFHPTQPYIVSASDDHQVKL 230
Query: 65 Y-----------GRHNNTQALLESSEAVSTKFLQFLENQGILLNVTSTNLIEVWDIDKKR 113
+ G +NN L F Q ++++ + I VWDI KK
Sbjct: 231 WRMNDPIVDTFRGHYNNVSCAL------------FHPRQDLIISNSEDKTIRVWDIIKK- 277
Query: 114 LSHVHVCKEEITSF-TIMQHSNYMLL--GDTAGKISVLKLDQESSQIVK 159
S VH+ + + F T+ H N L G +G I V KL++E V+
Sbjct: 278 -STVHMIRRDHDRFWTLASHPNQNLFAAGHDSGMI-VFKLERERPLFVQ 324
>sp|Q15334|L2GL1_HUMAN Lethal(2) giant larvae protein homolog 1 OS=Homo sapiens GN=LLGL1
PE=1 SV=3
Length = 1064
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 51/256 (19%)
Query: 35 YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLENQGI 94
+GFP+ + A+DP +I+A T+ G +K+YG L A T+ + FL QG
Sbjct: 31 HGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAPGVEFTGLHRDAATVTQ-MHFLTGQGR 89
Query: 95 LLNVTSTNLIEVWDIDKKRLSHVHVCK--EEITSFTIMQHSNY-------------MLLG 139
LL++ + + +W+I H + C EE SF + + ++L
Sbjct: 90 LLSLLDDSSLHLWEI-----VHHNGCAHLEEALSFQLPSRPGFDGASAPLSLTRVTVVLL 144
Query: 140 DTAGKISVLKLDQESSQIVKMKYI----------------IPLSASHGNEVSGDPAVINI 183
A I+ L + S + + + +P G + ++
Sbjct: 145 VAASDIAALGTEGSSVFFLDVTTLTLLEGQTLAPGEVLRSVPDDYRCGKALGPVESLQGH 204
Query: 184 LPQPTAESKRILIIFRDGLISLWDIRESKSIFSMGGNVLQSVYHETKQVTSACWACPIGS 243
L PT +ILI + GL+ +W+ + ++ +Q+ S CW S
Sbjct: 205 LRDPT----KILIGYSRGLLVIWN---------QASQCVDHIFLGNQQLESLCWG-RDSS 250
Query: 244 KVAVGYSNGEILIWGV 259
V +S+G +W V
Sbjct: 251 TVVSSHSDGSYAVWSV 266
>sp|P38163|SRO77_YEAST Lethal(2) giant larvae protein homolog SRO77 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SRO77 PE=1
SV=2
Length = 1010
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 19 SDGLKSSDVDPRLVFHYGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESS 78
S+G+ S D + + YG +D Q +LA AT G I +YG+ + +
Sbjct: 24 SNGINSKFFDTKKICTYGINGRITVTTFDYTQSLLAVATTAGEIHVYGQ-KQIEVVFTLK 82
Query: 79 EAVSTKFLQFLENQGI-LLNVTSTNLIEVWDIDKKRLSHVHVCKEEITSFTIMQHSNYML 137
K ++F+ +GI L+ V + I V + K++ C IT ++ML
Sbjct: 83 NRPQIKHMRFI--KGIYLIAVDEKSNIIVLSVHSKQILTTVFCPNSITCIETDPSLDWML 140
Query: 138 LGDTAGKISVLKLDQESSQIVKMK 161
+G +G S+L D + +Q+ K+K
Sbjct: 141 IGLESG--SILIYDVDRNQMSKLK 162
Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 115/267 (43%), Gaps = 38/267 (14%)
Query: 457 KVKNLFITGHSDGAINFWDVSCPLFLLILSLKQQSEKDFS-LSGIPLTALYYDGTSRVLV 515
+ ++ +TGHS+G++ WD S + + K + + + + + + + L
Sbjct: 471 ETRSALLTGHSNGSVRIWDASHSEVTDNAVFEVNTAKVLNRATNLAIKNISFASETLELA 530
Query: 516 SGDQSGMVRIFK-----------------LKYEPHAIENS-FLSFTGSKKGNSHI----I 553
+ G V +FK LK+ ++++S + S +G +++ I
Sbjct: 531 VSSEVGDVILFKFETNKFYGQLPKSDALQLKFSRFSLDDSKTILVDVSDRGPTNVKQGFI 590
Query: 554 HSVKVMKINGSIISLNMNRNSQHLAVGSDQGYVYLLDTEGPTVLYQKH---IASDISSGI 610
S + G++ ++ MN N +AVG +G + +LD GP +++ ++ I+ SS +
Sbjct: 591 PSTVIHAKKGAVSAI-MNSNIGFVAVGFIEGTLIILDRRGPAIIFNENIRVISKAGSSYV 649
Query: 611 VSLQFETCSLQ----GFEKNFLVIATKDSSVL---VLDSDNGN--MLSTNLIHPKKPSRA 661
++ F C ++ GF ++ T ++ +L + NG + T+ +
Sbjct: 650 STVHF--CVMEYGDDGFSSILMLCGTDIGELMTFKILPATNGRFEVKFTDATKTNNQGKI 707
Query: 662 LFMQILNGQDGLARGANLSNVAGMNKG 688
L + G + A +S + G++KG
Sbjct: 708 LGINSFAKDTGYSCSATISKMQGLSKG 734
>sp|Q9P783|RRB1_SCHPO Ribosome assembly protein rrb1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rrb1 PE=1 SV=1
Length = 480
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 16/136 (11%)
Query: 200 DGLISLWDIRESKSIFSMGGNVLQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIWGV 259
DG +WD+R + ++ N H V W + + +A G NG +W V
Sbjct: 313 DGTFRIWDVRNKQKTSALTVNA-----HPGVDVNVLSWNTRVPNLLATGADNG---VWSV 364
Query: 260 PSILNLKTEECGTQITPICKLNLGYKLDKIPISSLKWVYADGKASRLYIMGASDFVSMNL 319
+ +LK+ + TP+ +K + PI S++W + S + ++GA + +S+
Sbjct: 365 WDLRSLKS--SSSVATPVAS----FKWHRAPIYSIEW--HPNEDSVIGVVGADNQISLWD 416
Query: 320 LQIVLLNEQTESRTTK 335
L + L E+ +SR +
Sbjct: 417 LSVELDEEEQDSRAAE 432
>sp|Q54QU5|WDR89_DICDI WD repeat-containing protein 89 homolog OS=Dictyostelium discoideum
GN=wdr89 PE=4 SV=1
Length = 359
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 32/209 (15%)
Query: 52 ILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLENQGILLNVTSTNLIEVWDIDK 111
+LAAA + IK+Y R NNT + S + +F+EN LL+ +S +++WD
Sbjct: 39 LLAAAGSNYLIKIYDRSNNTILNVLSGHKDAINETKFIENTNTLLSCSSDKTVKIWDTKT 98
Query: 112 KRLSHVHVCKEEITSFTIMQHSNYMLLGDTAGKISVLKLDQESSQIVKMKYIIPLSASHG 171
+ S + EI F+I + + + +G G + VL + K I SH
Sbjct: 99 GQCSQTINQQGEI--FSIDLNGDILAMG--VGSMVVLY------NLSTKKMIRKFDCSHT 148
Query: 172 NEVSGDPAVINILPQPTAESKRILIIFRDGLISLWDIRES-------------KSIFSMG 218
+V+ + P ++K ++ DGLI ++D+ ++ SI ++G
Sbjct: 149 EDVT------RVRFHPIDKNK-LVSCSVDGLICMYDLEQADDDDAIVHVINAEDSIGNIG 201
Query: 219 --GNVLQSVYHETKQVTSACWACPIGSKV 245
G+ Q +Y + A W G K+
Sbjct: 202 FFGSAYQYLYTLSHTERLATWDLTTGLKI 230
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 91/242 (37%), Gaps = 44/242 (18%)
Query: 36 GFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLENQGIL 95
G S + P +LA+ D ++L+ + +FL F N L
Sbjct: 1072 GHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTL 1131
Query: 96 LNVTSTNLIEVWDIDKKRLSHVHVCKEEITSFTIMQHSNYM----------LLGDTAGKI 145
N +S ++ +WDI K+ C +T+ H+N++ L +G
Sbjct: 1132 ANGSSDQIVRLWDISSKK------CL-----YTLQGHTNWVNAVAFSPDGATLASGSGDQ 1180
Query: 146 SVLKLDQESSQIVKMKYIIPLSASHGNEVSGDPAVINILPQPTAESKRILIIFRDGLISL 205
+V D SS K YI+ S N V +P + + ++ R L
Sbjct: 1181 TVRLWDISSS---KCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVR-----------L 1226
Query: 206 WDIRESKSIFSMGGNVLQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIWGVPSILNL 265
W+I SK + + G+ T V S + P GS +A G S+ + +W + S L
Sbjct: 1227 WEINSSKCLCTFQGH--------TSWVNSVVFN-PDGSMLASGSSDKTVRLWDISSSKCL 1277
Query: 266 KT 267
T
Sbjct: 1278 HT 1279
>sp|A6ZZZ8|CAF4_YEAS7 CCR4-associated factor 4 OS=Saccharomyces cerevisiae (strain
YJM789) GN=CAF4 PE=3 SV=2
Length = 645
Score = 38.5 bits (88), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Query: 453 QSHSKVKNLFITGHSDGAINFWD--VSCPLFLLILSLKQQSEK-------DFSLSGIPLT 503
Q K N+ ITG D + WD +S L+L LK+++E+ +F L +T
Sbjct: 371 QIDKKNYNMLITGSKDATLKLWDLNLSRELYLDHSPLKEKTEEIVTPCIHNFELHKDEIT 430
Query: 504 ALYYDGTSRVLVSGDQSGMVRIFKLKYEPHAIENSFLSFTGS----KKGNSHIIHSVKVM 559
AL +D S LVSG + + + L I+ L FT + K + + ++
Sbjct: 431 ALSFD--SEALVSGSRDKKIFHWDLT-TGKCIQQLDLIFTPTHSDIKMPARSLNNGTCLL 487
Query: 560 KINGSIISLNMNRNSQHLAVGSDQGYVYLLDTE--GPTVLYQKHIASDISSGIVSLQFET 617
+I NS LA G+ G V L D P L + H + GI SL+F++
Sbjct: 488 GTEAPMIGALQCYNSA-LATGTKDGLVRLWDLRVGKPVRLLEGH-----TDGITSLKFDS 541
Query: 618 CSLQGFEKNFLVIATKDSSVLVLD 641
EK LV + D+SV + D
Sbjct: 542 ------EK--LVTGSMDNSVRIWD 557
>sp|A0CH87|LIS12_PARTE Lissencephaly-1 homolog 2 OS=Paramecium tetraurelia
GN=GSPATT00007594001 PE=3 SV=1
Length = 403
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 36 GFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNT--QALLESSEAVSTKFLQFLENQG 93
G S N A+DP K + +A+ D IKL+ N+T + L+ +VST +QF ++
Sbjct: 145 GHTSNVNCLAFDPTGKYICSASSDLSIKLWELKNHTCVKTLIGHEHSVST--VQFSDHGD 202
Query: 94 ILLNVTSTNLIEVWDI 109
+L+ + I++W++
Sbjct: 203 FILSASRDKSIKLWEV 218
>sp|B1ANS9|WDR64_HUMAN WD repeat-containing protein 64 OS=Homo sapiens GN=WDR64 PE=2 SV=1
Length = 1081
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 461 LFITGHSDGAINFWDVSCPLFLLILSLKQQSEKDFSLSGIPLTALYYDGTSRVLVSGDQS 520
+ +T H DG + W + L +L + S I LT+LY D +R+L++G+
Sbjct: 784 ILVTAHEDGHLRLWTLEGRLLKDMLPFTKHS-------AISLTSLYTDSCTRILLAGNVE 836
Query: 521 GMV 523
G V
Sbjct: 837 GHV 839
>sp|P36130|CAF4_YEAST CCR4-associated factor 4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CAF4 PE=1 SV=3
Length = 643
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Query: 453 QSHSKVKNLFITGHSDGAINFWD--VSCPLFLLILSLKQQSEK-------DFSLSGIPLT 503
Q K N+ ITG D + WD +S ++L LK+++E+ +F L +T
Sbjct: 369 QIDKKNYNMLITGSKDATLKLWDLNLSREIYLDHSPLKEKTEEIVTPCIHNFELHKDEIT 428
Query: 504 ALYYDGTSRVLVSGDQSGMVRIFKLKYEPHAIENSFLSFTGS----KKGNSHIIHSVKVM 559
AL +D S LVSG + + + L I+ L FT + K + + ++
Sbjct: 429 ALSFD--SEALVSGSRDKKIFHWDLT-TGKCIQQLDLIFTPTHSDIKMPARSLNNGACLL 485
Query: 560 KINGSIISLNMNRNSQHLAVGSDQGYVYLLDTE--GPTVLYQKHIASDISSGIVSLQFET 617
+I NS LA G+ G V L D P L + H + GI SL+F++
Sbjct: 486 GTEAPMIGALQCYNSA-LATGTKDGIVRLWDLRVGKPVRLLEGH-----TDGITSLKFDS 539
Query: 618 CSLQGFEKNFLVIATKDSSVLVLD 641
EK LV + D+SV + D
Sbjct: 540 ------EK--LVTGSMDNSVRIWD 555
>sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii
GN=SNRNP40 PE=2 SV=1
Length = 357
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 46/263 (17%)
Query: 15 PGGSSDGLKSSDVDPRLVFHYGFPSGCNKFAYDPLQKILAAATK-----DGRIKLYGRHN 69
P GS+ L S+ D RL+ + C +A L+ A + DG + +
Sbjct: 76 PNGST--LASAGFD-RLILLWNVYGDCGNYAT--LKGYSGAVMELHYNTDGSMLFSASTD 130
Query: 70 NTQALLESSEAVSTKFLQ---------FLENQGILLNVTSTN--LIEVWDIDKKRLSHVH 118
T A+ +S K L+ + +G L T ++ +++WDI KK
Sbjct: 131 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF 190
Query: 119 VCKEEITSFTIMQHSNYMLLGDTAGKISVLKLDQESSQIVKMKYIIPLSASHGNEVSGDP 178
++ + T S+ ++ G I V L Q K+ Y + H + V+G
Sbjct: 191 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-----KLTYTM---RGHADSVTG-- 240
Query: 179 AVINILPQPTAESKRILIIFRDGLISLWDIR----ESKSIFSMGGNVLQSVYHETKQVTS 234
+++ ++E +L D + +WD+R + + + GNV ++ K +
Sbjct: 241 --LSL----SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV----HNFEKNLLR 290
Query: 235 ACWACPIGSKVAVGYSNGEILIW 257
W+ P GSK+A G ++ + +W
Sbjct: 291 CSWS-PDGSKIAAGSADRSVCVW 312
>sp|A0DB19|LIS11_PARTE Lissencephaly-1 homolog 1 OS=Paramecium tetraurelia
GN=GSPATT00015130001 PE=3 SV=1
Length = 403
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 36 GFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNT--QALLESSEAVSTKFLQFLENQG 93
G S N A+DP K + +A+ D IK++ N+T + L+ +VST +QF ++
Sbjct: 145 GHTSNVNCLAFDPTGKYICSASSDLSIKIWELKNHTCVKTLIGHEHSVST--VQFSDHGD 202
Query: 94 ILLNVTSTNLIEVWDI 109
+L+ + I++W++
Sbjct: 203 FILSASRDKNIKLWEV 218
>sp|Q9D565|WDR64_MOUSE WD repeat-containing protein 64 OS=Mus musculus GN=Wdr64 PE=2 SV=2
Length = 1086
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 461 LFITGHSDGAINFWDVSCPLFLLILSLKQQSEKDFSLSGIPLTALYYDGTSRVLVSGDQS 520
L ++ H DG + W + L +L + S I LT+LY D RVL++G+
Sbjct: 782 LLVSAHEDGHLRLWTLEGKLIKDMLPFTKHS-------AISLTSLYTDSCCRVLLAGNVE 834
Query: 521 GMV 523
G V
Sbjct: 835 GHV 837
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 46/267 (17%)
Query: 15 PGGSSDGLKSSDVDPRLVFHYGFPSGCNKFAYDPLQKILAAATK-----DGRIKLYGRHN 69
P GS+ L S+ D RL+ + C+ +A L+ A + DG + +
Sbjct: 77 PNGST--LASAGFD-RLILLWNVYGDCDNYA--TLKGHSGAVMELHYNTDGSMLFSASTD 131
Query: 70 NTQALLESSEAVSTKFLQ---------FLENQGILLNVTSTN--LIEVWDIDKKRLSHVH 118
T A+ +S K L+ + +G L T ++ +++WDI KK
Sbjct: 132 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF 191
Query: 119 VCKEEITSFTIMQHSNYMLLGDTAGKISVLKLDQESSQIVKMKYIIPLSASHGNEVSGDP 178
++ + T S+ ++ G I V L Q K+ Y + H + V+G
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-----KLTYTM---RGHADSVTG-- 241
Query: 179 AVINILPQPTAESKRILIIFRDGLISLWDIR----ESKSIFSMGGNVLQSVYHETKQVTS 234
+++ ++E +L D + +WD+R + + + GNV ++ K +
Sbjct: 242 --LSL----SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNV----HNFEKNLLR 291
Query: 235 ACWACPIGSKVAVGYSNGEILIWGVPS 261
W+ P GSK+A G ++ + +W S
Sbjct: 292 CSWS-PDGSKIAAGSADRFVYVWDTTS 317
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 46/267 (17%)
Query: 15 PGGSSDGLKSSDVDPRLVFHYGFPSGCNKFAYDPLQKILAAATK-----DGRIKLYGRHN 69
P GS+ L S+ D RL+ + C+ +A L+ A + DG + +
Sbjct: 77 PNGST--LASAGFD-RLILLWNVYGDCDNYA--TLKGHSGAVMELHYNTDGSMLFSASTD 131
Query: 70 NTQALLESSEAVSTKFLQ---------FLENQGILLNVTSTN--LIEVWDIDKKRLSHVH 118
T A+ +S K L+ + +G L T ++ +++WDI KK
Sbjct: 132 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF 191
Query: 119 VCKEEITSFTIMQHSNYMLLGDTAGKISVLKLDQESSQIVKMKYIIPLSASHGNEVSGDP 178
++ + T S+ ++ G I V L Q K+ Y + H + V+G
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-----KLTYTM---RGHADSVTG-- 241
Query: 179 AVINILPQPTAESKRILIIFRDGLISLWDIR----ESKSIFSMGGNVLQSVYHETKQVTS 234
+++ ++E +L D + +WD+R + + + GNV ++ K +
Sbjct: 242 --LSL----SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV----HNFEKNLLR 291
Query: 235 ACWACPIGSKVAVGYSNGEILIWGVPS 261
W+ P GSK+A G ++ + +W S
Sbjct: 292 CSWS-PDGSKIAAGSADRFVYVWDTTS 317
>sp|O60161|UTP4_SCHPO U3 small nucleolar RNA-associated protein 4 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=utp4 PE=3 SV=1
Length = 710
Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 563 GSIISLNMNRNSQHLAVGSDQGYVYLLD-TEGPTVLYQKHIASDISSGIVSLQFETCSLQ 621
G+I S+ + ++ LAVG D G L D + GP V+ K + +S I+SL F+T
Sbjct: 111 GAIWSIAICDETKTLAVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDFQT---- 166
Query: 622 GFEKNFLVIATKDSSVLVLD--SDNGNMLSTNLI-HPKKPSRALFMQILNGQDGLARGAN 678
K+ LV D + V D + N ++S + +K AL + + +DG A+
Sbjct: 167 ---KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSAD 223
Query: 679 LSNVAGMNKG 688
S G
Sbjct: 224 SSGAVKFWNG 233
>sp|O74184|WAT1_SCHPO WD repeat-containing protein wat1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=wat1 PE=1 SV=1
Length = 314
Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 29 PRLVFHYGFPSGCNKFAYDPLQKILAAATKDGRIKLYG-RHNNTQALLESSEAVSTKFLQ 87
P + F G + A+ K LA +++DG +K++ R + Q + V+ +
Sbjct: 75 PLMTFE-GHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLLIH 133
Query: 88 FLENQGILLNVTSTNLIEVWDIDKKRLSHVHVCKEEI--TSFTIMQHSNYMLLGDTAGKI 145
NQG LL+ + + WD+ + +H + +E++ +S T+ + ++ G+ G
Sbjct: 134 --PNQGELLSCDQSGRVRAWDLGENSCTHELIPEEDVPMSSITVGSDGSMLIAGNNKGNC 191
Query: 146 SVLKL 150
V ++
Sbjct: 192 YVWRM 196
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 41 CNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVS-TKFLQFLENQGILLNVT 99
C KF+ P +++ + ++D IK++ N Q + S++V F+ F + + +
Sbjct: 149 CAKFS--PDGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNPSGTCIASAG 205
Query: 100 STNLIEVWDID-KKRLSHVHVCKEEITSFTIMQHSNYMLLGDTAGKISVLKL 150
S ++VWD+ K L H V + + NY++ + G + +L L
Sbjct: 206 SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 257
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 15/200 (7%)
Query: 36 GFPSGCNKFAYDPLQKILAAATKDGRIKLYGR--HNNTQALLESSEAVSTKFLQFLENQG 93
G A+DP K LA+ + D ++KL+ + + L VS+ + FL +
Sbjct: 162 GHTDSVQDVAFDPSGKFLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSS--VAFLPSGD 219
Query: 94 ILLNVTSTNLIEVWDIDKKRLSHVHVCKEE-ITSFTIMQHSNYMLLGDTAGKISVLKLDQ 152
L++ + I++W++ + + E I S N + I + ++
Sbjct: 220 FLVSASRDKTIKMWEVSTGYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVES 279
Query: 153 ESSQIV--KMKYIIPLSASHGNEVSGDPAVINILPQPTAESKRILIIFRDGLISLWDIRE 210
Q+V ++++ A + P +N LP S ++ RD I WD+
Sbjct: 280 RECQVVLRGHEHVVECIA-----WASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNI 334
Query: 211 SKSIFSMGGN---VLQSVYH 227
+F + G+ V Q V+H
Sbjct: 335 GICLFVLIGHDNWVRQLVFH 354
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 41 CNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVS-TKFLQFLENQGILLNVT 99
C KF+ P +++ + ++D IK++ N Q + S++V F+ F + + +
Sbjct: 149 CAKFS--PDGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNPSGTCIASAG 205
Query: 100 STNLIEVWDID-KKRLSHVHVCKEEITSFTIMQHSNYMLLGDTAGKISVLKL 150
S ++VWD+ K L H V + + NY++ + G + +L L
Sbjct: 206 SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDL 257
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 32 VFHY-GFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLE 90
VF Y G A+ P K LA+A+ D +KL+ +S + +QF
Sbjct: 140 VFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHP 199
Query: 91 NQGILLNVTSTNLIEVWDIDK 111
N+ +L + ++ +++WD++K
Sbjct: 200 NEYLLASGSADRTVKLWDLEK 220
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 46/267 (17%)
Query: 15 PGGSSDGLKSSDVDPRLVFHYGFPSGCNKFAYDPLQKILAAATK-----DGRIKLYGRHN 69
P GS+ L S+ D RL+ + C+ +A L+ A + DG + +
Sbjct: 76 PNGST--LASAGFD-RLILLWNVYGDCDNYA--TLKGHSGAVMELHYNTDGSMLFSASTD 130
Query: 70 NTQALLESSEAVSTKFLQ---------FLENQGILLNVTSTN--LIEVWDIDKKRLSHVH 118
T A+ +S K L+ + +G L T ++ +++WDI KK
Sbjct: 131 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF 190
Query: 119 VCKEEITSFTIMQHSNYMLLGDTAGKISVLKLDQESSQIVKMKYIIPLSASHGNEVSGDP 178
++ + T S+ ++ G I V L Q K+ Y + H + V+G
Sbjct: 191 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-----KLTYTM---RGHADSVTG-- 240
Query: 179 AVINILPQPTAESKRILIIFRDGLISLWDIR----ESKSIFSMGGNVLQSVYHETKQVTS 234
+++ ++E +L D + +WD+R + + + GNV ++ K +
Sbjct: 241 --LSL----SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV----HNFEKNLLR 290
Query: 235 ACWACPIGSKVAVGYSNGEILIWGVPS 261
W+ P GSK+A G ++ + +W S
Sbjct: 291 CSWS-PDGSKIAAGSADRFVYVWDTTS 316
>sp|Q75002|POL_HV1ET Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M
subtype C (isolate ETH2220) GN=gag-pol PE=3 SV=3
Length = 1439
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 280 LNLGYKLDKIPISSLKWVYADGKASRLYIMGASDFVSMNLLQ-IVLLNEQTESRTTKLAL 338
+ L Y+L+K PI+ ++ Y DG A+R +G + +V+ Q IV L E T +T A+
Sbjct: 1014 VKLWYQLEKEPIAGVETFYVDGAANRETKIGKAGYVTDRGRQKIVSLTETTNQKTELQAI 1073
Query: 339 PLS 341
L+
Sbjct: 1074 QLA 1076
>sp|O12158|POL_HV192 Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M
subtype C (isolate 92BR025) GN=gag-pol PE=1 SV=2
Length = 1431
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 280 LNLGYKLDKIPISSLKWVYADGKASRLYIMGASDFVSMNLLQ-IVLLNEQTESRTTKLAL 338
+ L Y+L+K PI+ + Y DG A+R MG + +V+ Q IV + E T +T A+
Sbjct: 1006 VKLWYQLEKEPIAGAETFYVDGAANREIKMGKAGYVTDRGRQKIVSITETTNQKTELQAI 1065
Query: 339 PLS 341
L+
Sbjct: 1066 QLA 1068
>sp|Q6ZMW3|EMAL6_HUMAN Echinoderm microtubule-associated protein-like 6 OS=Homo sapiens
GN=EML6 PE=2 SV=2
Length = 1958
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 454 SHSKVKNLFITGHSDGAINFW-DVSCPLFLLILSLKQQSEKDFSLSGIPLTALYYDGTSR 512
S+ ++++L +G + G I W D+ LL+ ++K P+ A+Y +
Sbjct: 870 SYGRMEDLVFSGAATGDIFIWKDI-----LLLKTVKAHDG--------PVFAMY--ALDK 914
Query: 513 VLVSGDQSGMVRIFKLKYE----PHAIENSFLSFTGSKKGNSHIIHSVKVMKINGSIISL 568
V+G + G+V ++ +E +AI+ S LS S KG +++ N SI ++
Sbjct: 915 GFVTGGKDGIVELWDDMFERCLKTYAIKRSALST--SSKG--------LLLEDNPSIRAI 964
Query: 569 NMNRNSQHLAVGSDQGYVYLLDTEGP-TVLYQKHIASDI 606
+ H+ VG+ G + +D GP T+L Q H+ ++
Sbjct: 965 TLGHG--HILVGTKNGEILEIDKSGPMTLLVQGHMEGEV 1001
>sp|Q80X44|ZBT24_MOUSE Zinc finger and BTB domain-containing protein 24 OS=Mus musculus
GN=Zbtb24 PE=1 SV=1
Length = 710
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 72 QALLESSEAVSTKFLQFLENQGILLNVTSTNLIEVWDIDKKRLSHVHVCKEEITSFTIMQ 131
Q L+ S++ + +Q L G + + T + V + K+ L H+H +E+ TS
Sbjct: 601 QGLILSAQQEQAEHIQSLSVIGGQMESSQTEPVHVITLSKETLEHLHAHQEQTTS----- 655
Query: 132 HSNYMLLGDTAGKISVLKLDQESSQIVKMKYIIPLSASHGNEVSGDP 178
+ DT + + + + +++ + +PL S G V+G P
Sbjct: 656 ---SVPAADTGARATPVPSTRPGAELTQAPLAVPLDPSPGATVAGWP 699
>sp|P04587|POL_HV1B5 Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M
subtype B (isolate BH5) GN=gag-pol PE=1 SV=3
Length = 1447
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 280 LNLGYKLDKIPISSLKWVYADGKASRLYIMGASDFVSMNLLQIVLLNEQTESRTTKLA-- 337
+ L Y+L+K PI + Y DG ASR +G + +V+ Q V+ T ++ T+L
Sbjct: 1022 VKLWYQLEKEPIVGAETFYVDGAASRETKLGKAGYVTNRGRQKVVTLTHTTNQKTELQAI 1081
Query: 338 -LPLSEPCIDMEIISSS 353
L L + +++ I++ S
Sbjct: 1082 HLALQDSGLEVNIVTDS 1098
>sp|Q12038|SRO7_YEAST Lethal(2) giant larvae protein homolog SRO7 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SRO7 PE=1
SV=1
Length = 1033
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 35 YGFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLENQGI 94
YG S A+D Q +LA AT G + +YG+ + +++ + + K ++F+ +GI
Sbjct: 74 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQ-QVEVVIKLEDRSAIKEMRFV--KGI 130
Query: 95 -LLNVTSTNLIEVWDIDKKRLSHVHVCKEEITSFTIMQHSNYMLLGDTAGKISVLKLDQE 153
L+ + + + + V + +++ +ITS ++ML+G G + V +D++
Sbjct: 131 YLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD 190
>sp|Q5SQM0|EMAL6_MOUSE Echinoderm microtubule-associated protein-like 6 OS=Mus musculus
GN=Eml6 PE=2 SV=1
Length = 1958
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 454 SHSKVKNLFITGHSDGAINFW-DVSCPLFLLILSLKQQSEKDFSLSGIPLTALYYDGTSR 512
S+ ++++L +G + G I W DV LL+ ++K P+ A+Y +
Sbjct: 870 SYGRMEDLVFSGAATGDIFIWKDV-----LLLKTVKAHDG--------PVFAMY--ALDK 914
Query: 513 VLVSGDQSGMVRIFKLKYE----PHAIENSFLSFTGSKKGNSHIIHSVKVMKINGSIISL 568
V+G + G+V ++ +E +AI+ + LS S KG +++ N SI ++
Sbjct: 915 GFVTGGKDGIVELWDDMFERCLKTYAIKRTALS--TSSKG--------LLLEDNPSIRAI 964
Query: 569 NMNRNSQHLAVGSDQGYVYLLDTEGP-TVLYQKHIASDI 606
+ H+ VG+ G + +D GP T+L Q H+ ++
Sbjct: 965 TLGHG--HILVGTKNGEILEIDKSGPMTLLVQGHMEGEV 1001
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 36 GFPSGCNKFAYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQ---FLENQ 92
G G N ++ P ++ + + D ++KL+ R + T+A + T + F +Q
Sbjct: 207 GHTRGVNWASFHPTLPLIVSGSDDRQVKLW-RMSATKAWEVDTCRGHTNNVDSVIFHPHQ 265
Query: 93 GILLNVTSTNLIEVWDIDKKRLSHVHVCKEEITSF-TIMQHSNYMLLGDTAGK-ISVLKL 150
++++V + VWD+DK+ + V K E F I H + L G I V KL
Sbjct: 266 NLIISVGEDKTLRVWDLDKR--TPVKQFKRENDRFWLIAAHPHINLFGAAHDSGIMVFKL 323
Query: 151 DQE 153
D+E
Sbjct: 324 DRE 326
>sp|P03367|POL_HV1BR Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M
subtype B (isolate BRU/LAI) GN=gag-pol PE=1 SV=3
Length = 1447
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 280 LNLGYKLDKIPISSLKWVYADGKASRLYIMGASDFVSMNLLQ-IVLLNEQTESRT--TKL 336
+ L Y+L+K PI + Y DG ASR +G + +V+ Q +V L + T +T +
Sbjct: 1022 VKLWYQLEKEPIVGAETFYVDGAASRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAI 1081
Query: 337 ALPLSEPCIDMEIISSS 353
L L + +++ I++ S
Sbjct: 1082 HLALQDSGLEVNIVTDS 1098
>sp|Q9UTN4|PFS2_SCHPO Polyadenylation factor subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pfs2 PE=4 SV=1
Length = 509
Score = 35.0 bits (79), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 45 AYDPLQKILAAATKDGRIKLYGRHNNTQALLESSEAVSTKFLQFLENQGILLNVTSTNLI 104
A+ P A+ DG +K++ H +T+ L + K + + ++G+L + + NL+
Sbjct: 171 AFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLV 230
Query: 105 EVWD 108
+ WD
Sbjct: 231 KFWD 234
>sp|Q54D08|LST8_DICDI Protein LST8 homolog OS=Dictyostelium discoideum GN=lst8 PE=1 SV=1
Length = 304
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Query: 464 TGHSDGAINFWDVSCPLFLLILSLKQQSEKDFSLSGIPLTALYYDGTSRVLVSGDQSGMV 523
TG DG + WD+ P ++D+ S P+ + L+SGDQ+G +
Sbjct: 93 TGSEDGTVKIWDLKAP----------GCQRDYECSA-PVNTVVLHPNQAELISGDQNGSI 141
Query: 524 RIFKL 528
R++ L
Sbjct: 142 RVWDL 146
>sp|Q55BM1|Y0444_DICDI Probable inactive protein kinase DDB_G0270444 OS=Dictyostelium
discoideum GN=DDB_G0270444 PE=1 SV=1
Length = 1360
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 461 LFITGHSDGAINFWDVSCPLFLLILSLKQQSEKDFSLSGI------PLTALYYDGTSRVL 514
+ ++G DG I W V L + + Q +++GI +TAL +D T+ ++
Sbjct: 127 MLLSGGMDGTIRLWQVETGSLLAVYN---QDISKVTMNGIIDTTSAGITALTFDPTNLLV 183
Query: 515 VSGDQSGMVRIFKLK 529
+SG G+VR L+
Sbjct: 184 ISGTSDGIVRKHSLR 198
>sp|P20053|PRP4_YEAST U4/U6 small nuclear ribonucleoprotein PRP4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PRP4 PE=1
SV=1
Length = 465
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 200 DGLISLWDIRESKSIFSMGGNVLQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIWGV 259
D L LWDIR + ++ G+ +K + + W+ P G +VA G +G I +W +
Sbjct: 328 DSLSMLWDIRSGSKVMTLAGH--------SKPIYTVAWS-PNGYQVATGGGDGIINVWDI 378
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 369,894,007
Number of Sequences: 539616
Number of extensions: 15400177
Number of successful extensions: 44541
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 44147
Number of HSP's gapped (non-prelim): 518
length of query: 1042
length of database: 191,569,459
effective HSP length: 128
effective length of query: 914
effective length of database: 122,498,611
effective search space: 111963730454
effective search space used: 111963730454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)