Query 001636
Match_columns 1040
No_of_seqs 243 out of 409
Neff 4.1
Searched_HMMs 29240
Date Tue Mar 26 16:18:57 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001636.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_934-937//hhsearch_pdb/001636hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t7a_A Inositol pyrophosphate 1.0 1 1 940.8 25.8 324 3-339 4-327 (330)
2 2p0a_A Synapsin-3, synapsin II 1.0 1 1 229.9 12.0 224 62-323 85-323 (344)
3 1pk8_A RAT synapsin I; ATP bin 1.0 1 1 229.4 11.7 222 61-322 179-417 (422)
4 1i7n_A Synapsin II; synapse, p 1.0 1 1 226.3 12.1 220 60-319 66-302 (309)
5 2q7d_A Inositol-tetrakisphosph 1.0 1 1 203.7 17.8 274 4-320 16-335 (346)
6 3ln6_A Glutathione biosynthesi 1.0 1 1 171.2 5.7 224 25-295 426-721 (750)
7 3ln7_A Glutathione biosynthesi 1.0 1 1 169.9 4.9 176 92-294 479-726 (757)
8 1z2n_X Inositol 1,3,4-trisphos 1.0 1 1 161.5 16.1 248 1-299 6-305 (324)
9 1uc8_A LYSX, lysine biosynthes 1.0 1 1 149.5 16.9 239 27-297 11-258 (280)
10 3r5x_A D-alanine--D-alanine li 1.0 1 1 141.8 7.1 255 27-316 22-299 (307)
No 1
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=1.00 E-value=1 Score=940.77 Aligned_cols=324 Identities=57% Similarity=1.044 Sum_probs=313.2
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHHH
Q ss_conf 88816999974264225688666865999999851169838998176135348875567767110345689836999999
Q 001636 3 VHKKITIGVCVMEKKVKCGSEVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESY 82 (1040)
Q Consensus 3 ~~~~~~iGVCAMd~Ka~~~~~~~SkPmr~IL~RL~~~g~feviiFgd~vIL~e~Ve~wP~cD~lIsf~s~gfpl~kai~y 82 (1040)
.+++|+||||||++|| +|||||+||+||+++++|++|||||+||||||||+||+|||||||||+||||+|||+|
T Consensus 4 ~~~~~~~gvcam~~k~------~s~pm~~il~rl~~~~~f~~iif~d~~il~~~ve~wp~~d~lisf~s~gfpl~kai~y 77 (330)
T 3t7a_A 4 TERQIVVGICSMAKKS------KSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAY 77 (330)
T ss_dssp --CCEEEEEESCHHHH------TSHHHHHHHHHHTTSTTEEEEECCHHHHHHSCGGGSCCCSEEEECCCTTCCHHHHHHH
T ss_pred CCCCEEEEEEECCCCC------CCHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHH
T ss_conf 9986499997646600------1678999999743469679999479734369733187677887762579857999999
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCC
Q ss_conf 98719942589622567765999999999589999868997256797666532345784899264617877994033367
Q 001636 83 ATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDD 162 (1040)
Q Consensus 83 ~~lr~p~~iNdl~~q~~l~DR~~vlqiL~~~gIp~P~~~~~~r~~p~~~~~~~~e~~d~i~v~G~~~~kPfVeKpv~ged 162 (1040)
+++|+||+|||+.+|.++|||+++||+|+++|||+|+|+++++++..+....+++.+|+++++|++|+||||+||++|+|
T Consensus 78 ~~lr~p~~INd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~~~rd~~~~~~~~~~e~~d~i~~~g~~l~kPfVeKPv~Gsd 157 (330)
T 3t7a_A 78 AKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAED 157 (330)
T ss_dssp HHHHCCEESBCSTHHHHHTBHHHHHHHHHHTTCCCCCEEEECCBTTBGGGSSEEECSSEEEETTEEEESSEEEEESBTTC
T ss_pred HHHHCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEECCCHHHHHCCCCCCCCEEECCCCCCC
T ss_conf 98749966677999998877999999999769999998999578787665311033024542430146873683654456
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEE
Q ss_conf 51278801578891999985508975221377433345643499540478970238999887447876112899898465
Q 001636 163 HSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVM 242 (1040)
Q Consensus 163 Hni~IYyp~~~GgG~~~Lfrkign~sS~~~p~l~~~r~~gsyIyEEFi~~~G~DVKvytVGp~~vhAe~RKSPvvDG~vr 242 (1040)
||||||||++||||+++||||+||+||+|+|++ .+|++++|||||||+++|+||||||||++|+|||+|+||++||+||
T Consensus 158 hni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~-~vr~~~~~i~QEFI~~~G~DIRv~vVG~~vv~Am~R~sp~~~G~~r 236 (330)
T 3t7a_A 158 HNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPES-NVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVE 236 (330)
T ss_dssp CCCEEECCGGGTCCEEEEEEEETTEEEEEESCC-SCCSSSCEEEEECCCCSSEEEEEEEESTTCEEEEEEECTTSSCBCC
T ss_pred CCCEEECCCCCCCCHHHHHHHHCCCCCCCCHHH-HHCCCCCEEEEECCCCCCCEEEEEEECCEEEEEEEEECCCCCCCEE
T ss_conf 751145024468755545455077221137556-4224785899815589992689999999989999985888888278
Q ss_pred ECCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEEEEEECCCEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 26899931124628998899999999993690415756641899089941471201265466999999999999984089
Q 001636 243 RNPDGKEVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAP 322 (1040)
Q Consensus 243 rN~hgke~r~~v~Ls~~Ek~iA~kv~~afgq~VcGfDLLRs~g~s~V~DVNGwSFVK~n~kYYDdcA~ILr~~~l~~~~~ 322 (1040)
||+||||+|+++.||++|+++|++||+||||+||||||||++++|||||||||||||+|.+|||+||.|||.+|+++++|
T Consensus 237 ~N~~gG~~~~~v~Lt~eek~iA~kaa~a~G~~v~GVDlLrs~~~~~V~EVNg~~fvk~~~~yyd~~a~il~~~~~~~~~~ 316 (330)
T 3t7a_A 237 RDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAP 316 (330)
T ss_dssp BCTTSCBCCEECCCCHHHHHHHHHHHHHTTBSEEEEEEEEETTEEEEEEEEESCCCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 74788850224469999999999999996996478999998996289983799502684368999999999999997571
Q ss_pred CCCCCCCCCCCCCCCCC
Q ss_conf 99999999999887899
Q 001636 323 HLSSAIPPILPWKVNEP 339 (1040)
Q Consensus 323 ~~~~~~p~~lp~~~~~~ 339 (1040)
++ ++||+++.+
T Consensus 317 ~~------~~~~~~~~~ 327 (330)
T 3t7a_A 317 QF------HIPWSIPLE 327 (330)
T ss_dssp HH------TCCCCC---
T ss_pred CC------CCCCCCCCC
T ss_conf 35------776037777
No 2
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=229.85 Aligned_cols=224 Identities=14% Similarity=0.120 Sum_probs=173.3
Q ss_pred CCCEEECCCCCCC-----CHHHHHHHHHHCCCCCCCCCCHHHHHHHH----HHHHHHHHHCCC---CCCCEEEEECCCCC
Q ss_conf 7671103456898-----36999999987199425896225677659----999999995899---99868997256797
Q 001636 62 ICDCLIAFYSSGY-----PLEKAESYATLRKPFLVNELEPQHLLHDR----RKVYEQLEKYGI---PVPRYALVNREVPY 129 (1040)
Q Consensus 62 ~cD~lIsf~s~gf-----pl~kai~y~~lr~p~~iNdl~~q~~l~DR----~~vlqiL~~~gI---p~P~~~~~~r~~p~ 129 (1040)
..|++|.+-.+.. ....++++++..+.+++|++.+....+|| ...+++|.+.|+ |+|.+.+...
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~GvpviN~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t~~~~---- 160 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPN---- 160 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEESCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCEEESS----
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCC----
T ss_conf 8878999524432132014999999998789603388899986379307899999999977997799897774276----
Q ss_pred CCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCC-CCCCEEEEE
Q ss_conf 6665323457848992646178779940333675127880157889199998550897522137743334-564349954
Q 001636 130 QELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-REGSYIYEE 208 (1040)
Q Consensus 130 ~~~~~~~e~~d~i~v~G~~~~kPfVeKpv~gedHni~IYyp~~~GgG~~~Lfrkign~sS~~~p~l~~~r-~~gsyIyEE 208 (1040)
..+.+.. ++.|+|.||++|. +|.|+. |.+......+..+ .++ .+..++.||
T Consensus 161 --------~~~~~~~----~g~PvVvK~~~Gs-----------~G~GV~-lve~~~~~~~~~~----~~~~~~~~~~vQe 212 (344)
T 2p0a_A 161 --------HKPMVTA----PHFPVVVKLGHAH-----------AGMGKI-KVENQLDFQDITS----VVAMAKTYATTEA 212 (344)
T ss_dssp --------STTCCCC----SSSSEEEEESSCC-----------TTTTEE-EECSHHHHHHHHH----HHHHHTCCEEEEE
T ss_pred --------HHHHHHC----CCCCEEEEECCCC-----------CEECEE-EECCHHHHHHHHH----HHHCCCCEEEEEE
T ss_conf --------5555332----4998899958897-----------314749-9789999999999----9851497599982
Q ss_pred CCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHH-CCEEEEEEEEEECCC-
Q ss_conf 047897023899988744787611289989846526899931124628998899999999993-690415756641899-
Q 001636 209 FMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAF-RQAVCGFDLLRCEGR- 286 (1040)
Q Consensus 209 Fi~~~G~DVKvytVGp~~vhAe~RKSPvvDG~vrrN~hgke~r~~v~Ls~~Ek~iA~kv~~af-gq~VcGfDLLRs~g~- 286 (1040)
||+ .|.|+||++||++++ |+.|+++ .|.|+.|.+ ++...++.+|++++++|.+++++| |+.+||||||++.+|
T Consensus 213 fI~-~g~DiRv~VVGg~vv-a~~R~~~--~g~wrtN~~-~~~~e~~~l~~e~~~la~~Aa~a~gGldi~GVDll~~~~G~ 287 (344)
T 2p0a_A 213 FID-SKYDIRIQKIGSNYK-AYMRTSI--SGNWKANTG-SAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR 287 (344)
T ss_dssp CCC-EEEEEEEEEETTEEE-EEEEEES--SSCSSTTSS-SEEEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTSC
T ss_pred CCC-CCCCEEEEEECCEEE-EEEEECC--CCCCEECCC-CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
T ss_conf 048-995279999999999-9999648--998752677-53777617998999999999998279978999889738998
Q ss_pred EEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 0899414712012654669999999999999840899
Q 001636 287 SYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPH 323 (1040)
Q Consensus 287 s~V~DVNGwSFVK~n~kYYDdcA~ILr~~~l~~~~~~ 323 (1040)
.||||||+ ||.=+-.....+++.-+-+.+++.+..+
T Consensus 288 ~~VlEVN~-~~~P~~~~~~~~~~~~Ia~~ii~~i~~~ 323 (344)
T 2p0a_A 288 DYIIEVMD-SSMPLIGEHVEEDRQLMADLVVSKMSQL 323 (344)
T ss_dssp EEEEEEEC-TTCCCCGGGHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEECC-CCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999868-9887644244557999999999999976
No 3
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=1.00 E-value=1 Score=229.39 Aligned_cols=222 Identities=15% Similarity=0.147 Sum_probs=170.5
Q ss_pred CCCCEEECCCCCCC-----CHHHHHHHHHHCCCCCCCCCCHHHHHHHH----HHHHHHHHHCCC---CCCCEEEEECCCC
Q ss_conf 77671103456898-----36999999987199425896225677659----999999995899---9986899725679
Q 001636 61 PICDCLIAFYSSGY-----PLEKAESYATLRKPFLVNELEPQHLLHDR----RKVYEQLEKYGI---PVPRYALVNREVP 128 (1040)
Q Consensus 61 P~cD~lIsf~s~gf-----pl~kai~y~~lr~p~~iNdl~~q~~l~DR----~~vlqiL~~~gI---p~P~~~~~~r~~p 128 (1040)
...|++|.+-.+.. ....++++++..+.+++|++.+....+|| ...+++|.+.|+ |+|.+.+...
T Consensus 179 ~~~DaviiR~~~~~~~~~~~yr~vlr~lE~~GvpviNs~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t~~~~--- 255 (422)
T 1pk8_A 179 LKPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYPN--- 255 (422)
T ss_dssp ECCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEESCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESS---
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCC---
T ss_conf 57878999513321132024999999998789612388899997479327899999999857997799886673276---
Q ss_pred CCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCC-CCCCEEEE
Q ss_conf 76665323457848992646178779940333675127880157889199998550897522137743334-56434995
Q 001636 129 YQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-REGSYIYE 207 (1040)
Q Consensus 129 ~~~~~~~~e~~d~i~v~G~~~~kPfVeKpv~gedHni~IYyp~~~GgG~~~Lfrkign~sS~~~p~l~~~r-~~gsyIyE 207 (1040)
..+.+.. ++.|+|+||++|. +|.|+. |.+......+..+ .++ .+..++.|
T Consensus 256 ---------~~~~i~~----~g~PvVvKp~~GS-----------~G~GV~-lve~~~~l~~ii~----~~~~~~~~~~vQ 306 (422)
T 1pk8_A 256 ---------HKEMLSS----TTYPVVVKMGHAH-----------SGMGKV-KVDNQHDFQDIAS----VVALTKTYATAE 306 (422)
T ss_dssp ---------GGGCCCC----SSSSEEEEESSCC-----------TTTTEE-EECSHHHHHHHHH----HHHHHTSCEEEE
T ss_pred ---------HHHHHHC----CCCCEEEEECCCC-----------CEECEE-EECCHHHHHHHHH----HHHCCCCEEEEE
T ss_conf ---------5665541----5998899818897-----------314849-9679999999999----984249659998
Q ss_pred ECCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHH-CCEEEEEEEEEECCC
Q ss_conf 4047897023899988744787611289989846526899931124628998899999999993-690415756641899
Q 001636 208 EFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAF-RQAVCGFDLLRCEGR 286 (1040)
Q Consensus 208 EFi~~~G~DVKvytVGp~~vhAe~RKSPvvDG~vrrN~hgke~r~~v~Ls~~Ek~iA~kv~~af-gq~VcGfDLLRs~g~ 286 (1040)
|||+ .|.||||++||++|+ |+.|+++ .|.||.|++ ++...++.++++++++|.+++++| |+.+||||||++.+|
T Consensus 307 EfI~-~g~DIRv~VVGg~vv-a~~Rr~~--~g~WrtNvg-~g~~e~i~lt~e~~elA~kAaka~gGldiaGVDlL~s~dG 381 (422)
T 1pk8_A 307 PFID-AKYDVRVQKIGQNYK-AYMRTSV--SGNWKTNTG-SAMLEQIAMSDRYKLWVDTCSEIFGGLDICAVEALHGKDG 381 (422)
T ss_dssp ECCC-EEEEEEEEEETTEEE-EEEEEES--SSCSSTTSS-CEEEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTS
T ss_pred EECC-CCCEEEEEEECCEEE-EEEEECC--CCCCEECCC-CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
T ss_conf 5128-994289999999999-9999827--997454367-6156651799899999999999817997899988973899
Q ss_pred -EEEEEECC--CEECCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf -08994147--1201265466999999999999984089
Q 001636 287 -SYVCDVNG--WSFVKNSYKYYDDAACVLRKMFLEAKAP 322 (1040)
Q Consensus 287 -s~V~DVNG--wSFVK~n~kYYDdcA~ILr~~~l~~~~~ 322 (1040)
.||||||+ --+.++.. .+.+.-+.++++..+..
T Consensus 382 ~~~VlEVN~s~~P~~~g~~---~~~~~~IA~~ii~~i~~ 417 (422)
T 1pk8_A 382 RDHIIEVVGSSMPLIGDHQ---DEDKQLIVELVVNKMTQ 417 (422)
T ss_dssp CEEEEEEECTTCCCCTTCH---HHHHHHHHHHHHHHHHC
T ss_pred CEEEEEECCCCCCCCCCHH---HHHHHHHHHHHHHHHHH
T ss_conf 8799998789888753145---66799999999999998
No 4
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=1.00 E-value=1 Score=226.27 Aligned_cols=220 Identities=14% Similarity=0.122 Sum_probs=170.8
Q ss_pred CCCCCEEECCCCCCC-----CHHHHHHHHHHCCCCCCCCCCHHHHHHHH----HHHHHHHHHCCC---CCCCEEEEECCC
Q ss_conf 677671103456898-----36999999987199425896225677659----999999995899---998689972567
Q 001636 60 WPICDCLIAFYSSGY-----PLEKAESYATLRKPFLVNELEPQHLLHDR----RKVYEQLEKYGI---PVPRYALVNREV 127 (1040)
Q Consensus 60 wP~cD~lIsf~s~gf-----pl~kai~y~~lr~p~~iNdl~~q~~l~DR----~~vlqiL~~~gI---p~P~~~~~~r~~ 127 (1040)
.+..|++|.+-.+.. ....++++++.++.+++|++.+....+|| ...+++|.+.|+ |+|.+.+...
T Consensus 66 ~~~~D~vi~R~~~~~~~~~~~~r~vl~~le~~GvpviN~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~~~~~-- 143 (309)
T 1i7n_A 66 SFRPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSINSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPN-- 143 (309)
T ss_dssp EECCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEESCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESS--
T ss_pred ECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECC--
T ss_conf 116889999503432234413999999998789603388899997479417899999999967997799897775077--
Q ss_pred CCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCC-CCCCEEE
Q ss_conf 976665323457848992646178779940333675127880157889199998550897522137743334-5643499
Q 001636 128 PYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-REGSYIY 206 (1040)
Q Consensus 128 p~~~~~~~~e~~d~i~v~G~~~~kPfVeKpv~gedHni~IYyp~~~GgG~~~Lfrkign~sS~~~p~l~~~r-~~gsyIy 206 (1040)
..+.+.. ++.|+|.||++|. +|.|+. |.+......+..+ .++ .+..++.
T Consensus 144 ----------~~~~~~~----~g~PvVvK~~~Gs-----------~G~GV~-lv~~~~~~~~~~~----~~~~~~~~~~v 193 (309)
T 1i7n_A 144 ----------HREMLTL----PTFPVVVKIGHAH-----------SGMGKV-KVENHYDFQDIAS----VVALTQTYATA 193 (309)
T ss_dssp ----------GGGGSSC----CCSSEEEEESSCS-----------TTTTEE-EECSHHHHHHHHH----HHHHHTCCEEE
T ss_pred ----------HHHHHHC----CCCCEEEEECCCC-----------CEECEE-EECCHHHHHHHHH----HHHCCCCEEEE
T ss_conf ----------6566432----5998899968997-----------513859-9789999999999----98425974999
Q ss_pred EECCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHHHHH-CCEEEEEEEEEECC
Q ss_conf 54047897023899988744787611289989846526899931124628998899999999993-69041575664189
Q 001636 207 EEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAF-RQAVCGFDLLRCEG 285 (1040)
Q Consensus 207 EEFi~~~G~DVKvytVGp~~vhAe~RKSPvvDG~vrrN~hgke~r~~v~Ls~~Ek~iA~kv~~af-gq~VcGfDLLRs~g 285 (1040)
||||+ .|.|+||++||++++ |+.|+|+ .|.|+.|.+ ++...++.+|++++++|.+++++| |+.+||||||++.+
T Consensus 194 QefI~-~g~DiRv~VvGg~v~-a~~Rr~~--~g~wrtN~~-~~~~e~~~l~~e~~~la~~A~~a~gGldi~GVDll~~~~ 268 (309)
T 1i7n_A 194 EPFID-AKYDIRVQKIGNNYK-AYMRTSI--SGNWKTNTG-SAMLEQIAMSDRYKLWVDACSEMFGGLDICAVKAVHGKD 268 (309)
T ss_dssp EECCC-EEEEEEEEEETTEEE-EEEEESS--CTTTSCSCC-CSSEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETT
T ss_pred EEECC-CCCEEEEEEECCEEE-EEEEECC--CCCCEECCC-CCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf 95318-992289999999999-9999837--998742577-614565089989999999999982899789999898389
Q ss_pred C-EEEEEECC--CEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9-08994147--1201265466999999999999984
Q 001636 286 R-SYVCDVNG--WSFVKNSYKYYDDAACVLRKMFLEA 319 (1040)
Q Consensus 286 ~-s~V~DVNG--wSFVK~n~kYYDdcA~ILr~~~l~~ 319 (1040)
| .||||||+ .-+.++... +.+.-+.++++..
T Consensus 269 g~~~V~EVN~~~~P~~~~~~~---~~~~~ia~~ii~~ 302 (309)
T 1i7n_A 269 GKDYIFEVMDCSMPLIGEHQV---EDRQLITDLVISK 302 (309)
T ss_dssp SCEEEEEEECTTCCCCSSCHH---HHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCHHH---HHHHHHHHHHHHH
T ss_conf 988999987898898542224---4689999999999
No 5
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=1.00 E-value=1 Score=203.71 Aligned_cols=274 Identities=18% Similarity=0.238 Sum_probs=190.6
Q ss_pred CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCEEECCCCCCCC--------
Q ss_conf 881699997426422568866686599999985116983899817613534887556776711034568983--------
Q 001636 4 HKKITIGVCVMEKKVKCGSEVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYP-------- 75 (1040)
Q Consensus 4 ~~~~~iGVCAMd~Ka~~~~~~~SkPmr~IL~RL~~~g~feviiFgd~vIL~e~Ve~wP~cD~lIsf~s~gfp-------- 75 (1040)
.+..+||.|--.||. ++--.+.++..+.+.| ++++.+.-. .+......+|++|+..+..++
T Consensus 16 ~~~~~vG~~l~~kk~------~~~~~~~l~~al~~~G-~~~~~iD~~----~~~~~~~~~Dvvi~~l~~~~~ea~~~d~~ 84 (346)
T 2q7d_A 16 LKGKRVGYWLSEKKI------KKLNFQAFAELCRKRG-MEVVQLNLS----RPIEEQGPLDVIIHKLTDVILEADQNDSQ 84 (346)
T ss_dssp GTTCEEEEECCHHHH------HHHTHHHHHHHHHTTT-CEEEECCTT----SCSGGGCCCSEEEECCHHHHHHHHTTCHH
T ss_pred CCCEEEEEEECCCCC------HHHHHHHHHHHHHHCC-CEEEECCCC----CCHHHCCCCCEEEECCCCCCCCCCCCCHH
T ss_conf 675599999876662------0554999999998679-489991456----41544589788996775533223467436
Q ss_pred ---HHHHHHHHH--HCCCCCCCCCCHHHHHHHHHHHHHHHHHC-------CCCCCCEEEEECCCCCCCCCCCCCCCCEEE
Q ss_conf ---699999998--71994258962256776599999999958-------999986899725679766653234578489
Q 001636 76 ---LEKAESYAT--LRKPFLVNELEPQHLLHDRRKVYEQLEKY-------GIPVPRYALVNREVPYQELDYFIEEEDFVE 143 (1040)
Q Consensus 76 ---l~kai~y~~--lr~p~~iNdl~~q~~l~DR~~vlqiL~~~-------gIp~P~~~~~~r~~p~~~~~~~~e~~d~i~ 143 (1040)
...+++.+. ..+.+++|.......++||+..+++|.+. |||+|+++++....+. +..+.+.
T Consensus 85 ~~~~~~~l~~~~~~~~gv~vinp~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t~~~~~~~~~-------~~~~~~~ 157 (346)
T 2q7d_A 85 SLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFMELTSLCGD-------DTMRLLE 157 (346)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCEEEECSCCCT-------THHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHH-------HHHHHHH
T ss_conf 779999999999877990881889999986249999999984013245788799988998079878-------9999999
Q ss_pred ECCEECCCCEEEEECCCC---CCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE
Q ss_conf 926461787799403336---75127880157889199998550897522137743334564349954047897023899
Q 001636 144 VHGNRFWKPFVEKPVHGD---DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVY 220 (1040)
Q Consensus 144 v~G~~~~kPfVeKpv~ge---dHni~IYyp~~~GgG~~~Lfrkign~sS~~~p~l~~~r~~gsyIyEEFi~~~G~DVKvy 220 (1040)
..+ ++.|+|.||+.|+ -|++.+-+.. .. +. . .+..+++||||+.+|.|+|||
T Consensus 158 ~~~--lg~P~VvKP~~g~Gs~s~~v~~v~~~----------------~~-l~----~--~~~~~lvQefI~~~G~dirv~ 212 (346)
T 2q7d_A 158 KNG--LTFPFICKTRVAHGTNSHEMAIVFNQ----------------EG-LN----A--IQPPCVVQNFINHNAVLYKVF 212 (346)
T ss_dssp HTT--CCSSEEEECSBCSSTTCCEEEEECSG----------------GG-TT----C----CCEEEEECCCCTTEEEEEE
T ss_pred HCC--CCCCEEEEECCCCCCEEEEEEEECCH----------------HH-HH----H--CCCCEEEEEEECCCCEEEEEE
T ss_conf 628--88998998567786406546885388----------------99-97----5--479779998557998278999
Q ss_pred EECCCEEEEEECCCCCCC-C-------EEEE-CCC-CCCEEE---------EEEC--CHHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 988744787611289989-8-------4652-689-993112---------4628--99889999999999369041575
Q 001636 221 TVGPEYAHAEARKSPVVD-G-------VVMR-NPD-GKEVRY---------PVLL--TPNEKQMAREVCIAFRQAVCGFD 279 (1040)
Q Consensus 221 tVGp~~vhAe~RKSPvvD-G-------~vrr-N~h-gke~r~---------~v~L--s~~Ek~iA~kv~~afgq~VcGfD 279 (1040)
+||+.+++++.|..|... | .|.+ +.+ ++..++ ...+ +++.+++|.++++++|++++|||
T Consensus 213 VvG~~v~~~~r~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~el~~lA~~a~~alGl~~~gvD 292 (346)
T 2q7d_A 213 VVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGID 292 (346)
T ss_dssp EETTEEEEEEEECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred EECCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 99999999997247776757555663113100003577543233344445435479839999999999998299667168
Q ss_pred EEEEC--CCEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 66418--990899414712012654669999999999999840
Q 001636 280 LLRCE--GRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAK 320 (1040)
Q Consensus 280 LLRs~--g~s~V~DVNGwSFVK~n~kYYDdcA~ILr~~~l~~~ 320 (1040)
++++. |++||+|||.|-=-++-.+|...++.+|.+..-+.-
T Consensus 293 ii~~~~~g~~~VlEVN~~PG~~g~~~~~~~i~~~l~~~~~~~~ 335 (346)
T 2q7d_A 293 IIINNQTGQHAVIDINAFPGYEGVSEFFTDLLNHIATVLQGQS 335 (346)
T ss_dssp EEECTTTCCEEEEEEEESCCCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 8864589977999984785423412299999999999862369
No 6
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=1.00 E-value=1 Score=171.19 Aligned_cols=224 Identities=17% Similarity=0.179 Sum_probs=152.6
Q ss_pred CCHHHHHHHHHHHCCCCEEEEEECCC-EEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 68659999998511698389981761-35348875567767110345689836999999987199425896225677659
Q 001636 25 FSAPMGQILDRLQAFGEFEVIHFGDK-VILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDR 103 (1040)
Q Consensus 25 ~SkPmr~IL~RL~~~g~feviiFgd~-vIL~e~Ve~wP~cD~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR 103 (1040)
...-.+.|+.-+.+.| +++++.+.. -.+...... ..++. |- ......+...+..+.+||
T Consensus 426 ~e~S~~~l~~aA~~~G-i~v~vidp~~~l~~l~~~~--~~~~~--~~---------------g~itg~~~~~a~~~~~DK 485 (750)
T 3ln6_A 426 MELSTQLLLFDVIQKG-VNFEVLDEQDQFLKLWHNS--HIEYV--KN---------------GNMTSKDNYIVPLAMANK 485 (750)
T ss_dssp SCHHHHHHHHHHHHHT-CEEEESCSSSCEEEEEETT--EEEEE--ET---------------TTBCTTSCTHHHHHTTTS
T ss_pred CCCCHHHHHHHHHHCC-CCEEEECCCCHHHHHCCCC--CCEEE--EC---------------CCEECCCHHHHHHHHHCH
T ss_conf 5856899999998678-8789979970676620477--74799--61---------------870587999999997099
Q ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 99999999589999868997256797666532345784899264617877994033367512788015788919999855
Q 001636 104 RKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRK 183 (1040)
Q Consensus 104 ~~vlqiL~~~gIp~P~~~~~~r~~p~~~~~~~~e~~d~i~v~G~~~~kPfVeKpv~gedHni~IYyp~~~GgG~~~Lfrk 183 (1040)
..+.++|.++|||+|++..+... . +..+.+ ...++.|+|+||..|. +|.|+. +++.
T Consensus 486 ~~tk~lL~~~GIPvP~~~~~~~~--~-------ea~~~~---~~~~g~PvVVKP~~G~-----------~G~GV~-iv~~ 541 (750)
T 3ln6_A 486 VVTKKILDEKHFPTPFGDEFTDR--K-------EALNYF---SQIQDKPIVVKPKSTN-----------FGLGIS-IFKT 541 (750)
T ss_dssp HHHHHHHHHTTCCCCCCCCEETT--T-------THHHHH---HHSSSSCEEEEETTCC-----------SSSSCE-EESS
T ss_pred HHHHHHHHHCCCCCCCEEEECCH--H-------HHHHHH---HHHCCCCEEEEECCCC-----------CCCCEE-EEEC
T ss_conf 99999999779699998998999--9-------999999---9864995899848999-----------977779-9707
Q ss_pred HCCCCCCCCCCCC-CCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCC------------------------
Q ss_conf 0897522137743-334564349954047897023899988744787611289989------------------------
Q 001636 184 VGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVD------------------------ 238 (1040)
Q Consensus 184 ign~sS~~~p~l~-~~r~~gsyIyEEFi~~~G~DVKvytVGp~~vhAe~RKSPvvD------------------------ 238 (1040)
+.+....... +. ..+.+..+|+||||+ |.|++|++||+++++|+.|.++.+-
T Consensus 542 ~~s~eel~~a-~~~~~~~~~~vlVEefI~--G~E~~v~Vvgg~vvaa~~r~p~~v~GdG~~tI~eLI~~~n~dp~rg~~~ 618 (750)
T 3ln6_A 542 SANLASYEKA-IDIAFTEDSAILVEEYIE--GTEYRFFVLEGDCIAVLLRVAANVVGDGIHTISQLVKLKNQNPLRGYDH 618 (750)
T ss_dssp CCCHHHHHHH-HHHHHHHCSEEEEEECCC--SEEEEEEEETTEEEEEEEEECCEEECCTTCCHHHHHHHHTTCTTEESSS
T ss_pred CCCHHHHHHH-HHHHHHHCCCEEEEECCC--CCEEEEEEECCEEEEEEEEECCEEECCCCCCHHHHHHHHCCCCCCCCCC
T ss_conf 8999999999-999875277399995467--9789999999999899998666576588657999998624684335455
Q ss_pred ------------------------------CE-----EEECCCCCCEEEEE--ECCHHHHHHHHHHHHHHCCEEEEEEEE
Q ss_conf ------------------------------84-----65268999311246--289988999999999936904157566
Q 001636 239 ------------------------------GV-----VMRNPDGKEVRYPV--LLTPNEKQMAREVCIAFRQAVCGFDLL 281 (1040)
Q Consensus 239 ------------------------------G~-----vrrN~hgke~r~~v--~Ls~~Ek~iA~kv~~afgq~VcGfDLL 281 (1040)
|+ ++.|.+.|+....+ .++|+.+++|.++++++|+.+||+||+
T Consensus 619 ~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L~~~~Nls~Gg~~~d~td~i~p~~~~~a~~aa~~igl~~~GvDli 698 (750)
T 3ln6_A 619 RSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIELRRNSNISTGGDSIDVTNTMDPTYKQLAAEMAEAMGAWVCGVDLI 698 (750)
T ss_dssp CCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEESCSSCCTTTTCEEEECTTTSCHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 57632245337899999972898133389998899752230168973064534479999999999999849986999998
Q ss_pred EEC---------CCEEEEEECCC
Q ss_conf 418---------99089941471
Q 001636 282 RCE---------GRSYVCDVNGW 295 (1040)
Q Consensus 282 Rs~---------g~s~V~DVNGw 295 (1040)
..+ ++..|||||+=
T Consensus 699 ~~di~~~~~~~~~~~~iiEvN~~ 721 (750)
T 3ln6_A 699 IPNATQAYSKDKKNATCIELNFN 721 (750)
T ss_dssp ESCSSSCCCTTTTCCEEEEEESS
T ss_pred ECCCCCCCCCCCCCEEEEEECCC
T ss_conf 44764434345798289997588
No 7
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=1.00 E-value=1 Score=169.89 Aligned_cols=176 Identities=20% Similarity=0.226 Sum_probs=131.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECC
Q ss_conf 89622567765999999999589999868997256797666532345784899264617877994033367512788015
Q 001636 92 NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPS 171 (1040)
Q Consensus 92 Ndl~~q~~l~DR~~vlqiL~~~gIp~P~~~~~~r~~p~~~~~~~~e~~d~i~v~G~~~~kPfVeKpv~gedHni~IYyp~ 171 (1040)
+...+..+.+||....++|.++|||+|++..+.... +..+.+ ...++.|+|+||..|.
T Consensus 479 ~s~~aa~~~~DK~~tk~lL~~~GIPvP~~~~~~~~~---------ea~~~~---~~~~g~PvVVKP~~g~---------- 536 (757)
T 3ln7_A 479 DSYISPLIMENKVVTKKVLQKAGFNVPQSVEFTSLE---------KAVASY---ALFENRAVVIKPKSTN---------- 536 (757)
T ss_dssp SBSHHHHHHHHSHHHHHHHHHHTCCCCCEEEESCHH---------HHHHGG---GGSSSSCEEEEESSCS----------
T ss_pred CHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCHH---------HHHHHH---HHHCCCCEEEEECCCC----------
T ss_conf 889999996099999999997796999979979999---------999999---9861998899838999----------
Q ss_pred CCCCHHHHHHH-HHCCCCCCCCCCCC-CCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCC------------
Q ss_conf 78891999985-50897522137743-33456434995404789702389998874478761128998------------
Q 001636 172 SAGGGMKELFR-KVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVV------------ 237 (1040)
Q Consensus 172 ~~GgG~~~Lfr-kign~sS~~~p~l~-~~r~~gsyIyEEFi~~~G~DVKvytVGp~~vhAe~RKSPvv------------ 237 (1040)
.|.|+. ++. ++.+....-. -+. ..+.+..+++||||+ |.|++|+++|+++++|+.|.+|-|
T Consensus 537 -~G~GV~-iv~~~v~~~eel~~-al~~a~~~~~~vlVEefI~--G~Ei~v~Vlggkvvaai~R~p~~VvGDG~~ti~eLi 611 (757)
T 3ln7_A 537 -YGLGIT-IFQQGVQNREDFAK-ALEIAFREDKEVMVEDYLV--GTEYRFFVLGDETLAVLLRVPANVVGDSVHSVAELV 611 (757)
T ss_dssp -TTTTCE-ECSSCCCCHHHHHH-HHHHHHHHCSSEEEEECCC--SEEEEEEEETTEEEEEEEECCSEEEGGGCCCHHHHH
T ss_pred -CCCCEE-EECCCCCCHHHHHH-HHHHHHHCCCCEEEEECCC--CCEEEEEEECCEEEEEEEEECCCCCCCCCCCHHHHH
T ss_conf -978869-85378999999999-9999871599499997689--968999999999999999865212588865699999
Q ss_pred ------------------------------------------CCE-----EEECCCCCCEEEEE--ECCHHHHHHHHHHH
Q ss_conf ------------------------------------------984-----65268999311246--28998899999999
Q 001636 238 ------------------------------------------DGV-----VMRNPDGKEVRYPV--LLTPNEKQMAREVC 268 (1040)
Q Consensus 238 ------------------------------------------DG~-----vrrN~hgke~r~~v--~Ls~~Ek~iA~kv~ 268 (1040)
.|+ ++.|.|.|+....+ .++|+.+++|.+++
T Consensus 612 ~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~Ge~v~L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa 691 (757)
T 3ln7_A 612 AMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKDQLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGIT 691 (757)
T ss_dssp HHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSSCEEECCSSCCGGGTCCEEECTTTSCHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHHH
T ss_conf 76156601256666764334545899999997399834469999999864255311696226254667999999999999
Q ss_pred HHHCCEEEEEEEEEEC---------CCEEEEEECC
Q ss_conf 9936904157566418---------9908994147
Q 001636 269 IAFRQAVCGFDLLRCE---------GRSYVCDVNG 294 (1040)
Q Consensus 269 ~afgq~VcGfDLLRs~---------g~s~V~DVNG 294 (1040)
+++|+.|||+|++..+ ++..|+|||+
T Consensus 692 ~~lGl~~~GvDli~~di~~p~~~~~~~~~iiEvN~ 726 (757)
T 3ln7_A 692 KAMGAAVCGVDLIIPDLKQPATPNLTSWGVIEANF 726 (757)
T ss_dssp HHHTCSEEEEEEEESCSSSCCCSSTTTCEEEEEES
T ss_pred HHHCCCEEEEEEEECCCCCCCCCCCCCEEEEEECC
T ss_conf 98499889999996576543334679828999708
No 8
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=1.00 E-value=1 Score=161.46 Aligned_cols=248 Identities=18% Similarity=0.232 Sum_probs=166.1
Q ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE--EEECCCEEECCCCCCCC-CCCEEECCCCCCCCH-
Q ss_conf 98888169999742642256886668659999998511698389--98176135348875567-767110345689836-
Q 001636 1 MEVHKKITIGVCVMEKKVKCGSEVFSAPMGQILDRLQAFGEFEV--IHFGDKVILEDPIEKWP-ICDCLIAFYSSGYPL- 76 (1040)
Q Consensus 1 ~~~~~~~~iGVCAMd~Ka~~~~~~~SkPmr~IL~RL~~~g~fev--iiFgd~vIL~e~Ve~wP-~cD~lIsf~s~gfpl- 76 (1040)
|...+..+|||+.-+++. |- .+...+.+.| +++ +++.-.. |...+- .+|+++...+..+..
T Consensus 6 ~~~~~~m~i~il~~~~~~-------s~---~l~~al~~~G-~~v~~~~~d~~~----~~~~~~~~~d~v~~~~~~~~~~~ 70 (324)
T 1z2n_X 6 MTTKQTVSLFIWLPESKQ-------KT---LFISTKNHTQ-FELNNIIFDVTL----STELPDKEPNAIITKRTHPVGKM 70 (324)
T ss_dssp ----CEEEEEEECCHHHH-------HH---HBSSCCSEEE-EEETTEEEEEEE----ESSCCSSCCSEEEECCSCSSSHH
T ss_pred CCCCCCEEEEEEECHHHH-------HH---HHHHHHHHCC-CEEEEEEECCCC----CCCCCCCCCEEEEEECCCHHHHH
T ss_conf 663776799999752655-------53---4898877569-489999965898----71214897519999454418999
Q ss_pred HHHHHHHHH--CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEE
Q ss_conf 999999987--199425896225677659999999995899998689972567976665323457848992646178779
Q 001636 77 EKAESYATL--RKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFV 154 (1040)
Q Consensus 77 ~kai~y~~l--r~p~~iNdl~~q~~l~DR~~vlqiL~~~gIp~P~~~~~~r~~p~~~~~~~~e~~d~i~v~G~~~~kPfV 154 (1040)
...++.+.. .+..++|+.....++.||...+++|.++|||+|++..++... +..+.+.-.| +..|+|
T Consensus 71 ~~~l~~~~~~~~g~~~~~~~~~~~~~~dK~~~~~~l~~~gi~~P~~~~~~~~~---------~~~~~~~~~~--~~~P~v 139 (324)
T 1z2n_X 71 ADEMRKYEKDHPKVLFLESSAIHDMMSSREEINALLIKNNIPIPNSFSVKSKE---------EVIQLLQSKQ--LILPFI 139 (324)
T ss_dssp HHHHHHHHHHCTTSEEETCHHHHHHHTBHHHHHHHHHHTTCCCSCEEEESSHH---------HHHHHHHTTC--SCSSEE
T ss_pred HHHHHHHHHHCCCCEEECCHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCHH---------HHHHHHHHCC--CCCCEE
T ss_conf 99999999858997685879999987389999999997798999979967778---------8999999749--999889
Q ss_pred EEECCCCC----CCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEE
Q ss_conf 94033367----51278801578891999985508975221377433345643499540478970238999887447876
Q 001636 155 EKPVHGDD----HSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAE 230 (1040)
Q Consensus 155 eKpv~ged----Hni~IYyp~~~GgG~~~Lfrkign~sS~~~p~l~~~r~~gsyIyEEFi~~~G~DVKvytVGp~~vhAe 230 (1040)
+||..|.+ +++.+..... ++. ..+..+|+||||+..|.|++|+++|+++.++.
T Consensus 140 vKP~~g~g~~~s~gv~~v~~~~-----------------~l~------~~~~~~lvqe~i~~~g~~~~v~v~g~~~~~~~ 196 (324)
T 1z2n_X 140 VKPENAQGTFNAHQMKIVLEQE-----------------GID------DIHFPCLCQHYINHNNKIVKVFCIGNTLKWQT 196 (324)
T ss_dssp EEESBCSSSSGGGEEEEECSGG-----------------GGT------TCCSSEEEEECCCCTTCEEEEEEETTEEEEEE
T ss_pred EEECCCCCCCCCEEEEEEECHH-----------------HHH------HCCCCEEEEECCCCCCCEEEEEEECCEEEEEE
T ss_conf 9668887886432049973898-----------------986------32897899975178996899999999999999
Q ss_pred ECCCCC-C-----------------------------------CCEEEECCCCCCEEEEEECC-HHHHHHHHHHHHHHCC
Q ss_conf 112899-8-----------------------------------98465268999311246289-9889999999999369
Q 001636 231 ARKSPV-V-----------------------------------DGVVMRNPDGKEVRYPVLLT-PNEKQMAREVCIAFRQ 273 (1040)
Q Consensus 231 ~RKSPv-v-----------------------------------DG~vrrN~hgke~r~~v~Ls-~~Ek~iA~kv~~afgq 273 (1040)
|+++. + .+.++.|.+. +...+..++ ++.+++|.++++++|.
T Consensus 197 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~a~~~~~~lg~ 274 (324)
T 1z2n_X 197 -RTSLPNVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILE-DPILLNLTSEAEMRDLAYKVRCALGV 274 (324)
T ss_dssp -ECCCCCCCCSSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCS-CTTTTTSCCHHHHHHHHHHHHHHHTC
T ss_pred -ECCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCC-CCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf -1386644578866503215300233305555534334331134540003366-87555679979999999999998499
Q ss_pred EEEEEEEEEE-C-CCEEEEEEC---CCEECC
Q ss_conf 0415756641-8-990899414---712012
Q 001636 274 AVCGFDLLRC-E-GRSYVCDVN---GWSFVK 299 (1040)
Q Consensus 274 ~VcGfDLLRs-~-g~s~V~DVN---GwSFVK 299 (1040)
..||||++.. . |.+||+||| ||.-.-
T Consensus 275 ~~~~vD~~~~~~~g~~~vlEvN~~Pg~~~~~ 305 (324)
T 1z2n_X 275 QLCGIDFIKENEQGNPLVVDVNVFPSYGGKV 305 (324)
T ss_dssp SEEEEEEECGGGCSSCEEEEEEESCCTTSCB
T ss_pred CEEEEEEEEECCCCCEEEEEECCCCCCCCCC
T ss_conf 6771689977588988999974898767888
No 9
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=1.00 E-value=1 Score=149.54 Aligned_cols=239 Identities=21% Similarity=0.206 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCC-EEEC--CCCCCCCCCC-EEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 659999998511698389981761-3534--8875567767-11034568983699999998719942589622567765
Q 001636 27 APMGQILDRLQAFGEFEVIHFGDK-VILE--DPIEKWPICD-CLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHD 102 (1040)
Q Consensus 27 kPmr~IL~RL~~~g~feviiFgd~-vIL~--e~Ve~wP~cD-~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~D 102 (1040)
...+.+...+.+.| ++++++... .... .....|+.+| ++++.+++ +....+.+.++..+..++|+.....+.+|
T Consensus 11 ~~~~~~~~a~~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~~~~~~~~d 88 (280)
T 1uc8_A 11 PDERMLFERAEALG-LPYKKVYVPALPMVLGERPKELEGVTVALERCVSQ-SRGLAAARYLTALGIPVVNRPEVIEACGD 88 (280)
T ss_dssp HHHHHHHHHHHHHT-CCEEEEEGGGCCEETTBCCGGGTTCCEEEECCSSH-HHHHHHHHHHHHTTCCEESCHHHHHHHHB
T ss_pred HHHHHHHHHHHHCC-CCEEEEEHHHCEEECCCCCCCCCCCCEEEECCCCC-HHHHHHHHHHHHCCCCEECCHHHHHHHCC
T ss_conf 89999999999769-94799701460333267876367899999878650-23699999999879946089999988478
Q ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCEECCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 99999999958999986899725679766653234578489926461787799403336751278801578891999985
Q 001636 103 RRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFR 182 (1040)
Q Consensus 103 R~~vlqiL~~~gIp~P~~~~~~r~~p~~~~~~~~e~~d~i~v~G~~~~kPfVeKpv~gedHni~IYyp~~~GgG~~~Lfr 182 (1040)
|....++|.++|||+|++..+.... +....+. .++.|+|.||..|. .|.|+. +.+
T Consensus 89 K~~~~~~l~~~gi~~p~~~~~~~~~---------~~~~~~~----~~~~p~vvKp~~g~-----------~~~gv~-~v~ 143 (280)
T 1uc8_A 89 KWATSVALAKAGLPQPKTALATDRE---------EALRLME----AFGYPVVLKPVIGS-----------WGRLLA-XXX 143 (280)
T ss_dssp HHHHHHHHHHTTCCCCCEEEESSHH---------HHHHHHH----HHCSSEEEECSBCC-----------BCSHHH-HHH
T ss_pred HHHHHHHHHHCCCCCCCEEEECCHH---------HHHHHHH----HHCCCEEEEECCCC-----------CCCCCE-ECC
T ss_conf 9999999998696999958528999---------9999999----74998899978999-----------856634-303
Q ss_pred HHCCCCCCCCCCCCCCC--CCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCEEEEEECCHHH
Q ss_conf 50897522137743334--5643499540478970238999887447876112899898465268999311246289988
Q 001636 183 KVGNRSSEFHPDVRRVR--REGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNE 260 (1040)
Q Consensus 183 kign~sS~~~p~l~~~r--~~gsyIyEEFi~~~G~DVKvytVGp~~vhAe~RKSPvvDG~vrrN~hgke~r~~v~Ls~~E 260 (1040)
....-...+.. +.... .+..+|+||||+..+.+++++++|+++.++..|++ +.++.|.+.++...|..|+++-
T Consensus 144 ~~~el~~~~~~-~~~~~~~~~~~~lvqe~i~~~~~e~~v~v~~~~~~~~~~~~~----~~~~~~~~~g~~~~p~~l~~~~ 218 (280)
T 1uc8_A 144 XXXXXXXXXXX-KEVLGGFQHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRS----AHWITNTARGGQAENCPLTEEV 218 (280)
T ss_dssp HHHC-------------CTTTTCEEEEECCCCSSCCEEEEEETTEEEEEEEC------------------CEECCCCHHH
T ss_pred CCCCCCHHHHH-HHHHCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEEEEEEC----CCCCCCCCCCCCCCCCCCCHHH
T ss_conf 22221002566-766403678839998323799902999999999999999936----8833553478601578989999
Q ss_pred HHHHHHHHHHHCCEEEEEEEEEECCCEEEEEEC---CCEE
Q ss_conf 999999999936904157566418990899414---7120
Q 001636 261 KQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVN---GWSF 297 (1040)
Q Consensus 261 k~iA~kv~~afgq~VcGfDLLRs~g~s~V~DVN---GwSF 297 (1040)
+++|.++++++|..++|+|++...+++||+||| ||+.
T Consensus 219 ~~~~~~~~~~lg~g~~~vD~~~~~~g~~~iEiN~r~g~~~ 258 (280)
T 1uc8_A 219 ARLSVKAAEAVGGGVVAVDLFESERGLLVNEVNHTMEFKN 258 (280)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEEETTEEEEEEEETTCCCTT
T ss_pred HHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCCCCC
T ss_conf 9999999997399768999998089759999718987511
No 10
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=1.00 E-value=1 Score=141.81 Aligned_cols=255 Identities=13% Similarity=0.152 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCEEECCCCCCCCHH-HHHHHHHHCCCCCC-CCCCHHHHHHHHH
Q ss_conf 659999998511698389981761353488755677671103456898369-99999987199425-8962256776599
Q 001636 27 APMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLE-KAESYATLRKPFLV-NELEPQHLLHDRR 104 (1040)
Q Consensus 27 kPmr~IL~RL~~~g~feviiFgd~vIL~e~Ve~wP~cD~lIsf~s~gfpl~-kai~y~~lr~p~~i-Ndl~~q~~l~DR~ 104 (1040)
.--+.|+.-|.+.| ++++.++-.-. ...++....+|++++....++..+ .+...++..+..++ ++..+..+.+||.
T Consensus 22 ~s~~~v~~al~~~g-~~v~~i~~~~~-~~~~~~~~~~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~ 99 (307)
T 3r5x_A 22 MTGNEMIANLDKNK-YEIVPITLNEK-MDLIEKAKDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKN 99 (307)
T ss_dssp HHHHHHHHHSCTTT-EEEEEEECSSG-GGHHHHTTTCSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHCC-CEEEEECCCCC-HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHCCHH
T ss_conf 99999999998779-98999914685-01787605789999907889983789999999869985694899999971999
Q ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCC-EEEECCEECCCCEEEEECCCC-CCCEEEEECCCCCCHHHHHHH
Q ss_conf 999999958999986899725679766653234578-489926461787799403336-751278801578891999985
Q 001636 105 KVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEED-FVEVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFR 182 (1040)
Q Consensus 105 ~vlqiL~~~gIp~P~~~~~~r~~p~~~~~~~~e~~d-~i~v~G~~~~kPfVeKpv~ge-dHni~IYyp~~~GgG~~~Lfr 182 (1040)
...++|.++|||+|++..+.... +... .+. .++.|+|+||..|. -.+|.+. .+.. -....++
T Consensus 100 ~~~~~l~~~Gip~p~~~~~~~~~---------~~~~~~~~----~~~~P~vvKP~~~~~s~Gv~~v--~~~~-el~~~~~ 163 (307)
T 3r5x_A 100 ISKKILRYEGIETPDWIELTKME---------DLNFDELD----KLGFPLVVKPNSGGSSVGVKIV--YDKD-ELISMLE 163 (307)
T ss_dssp HHHHHHHHTTCCCCCEEEEESSS---------CCCHHHHH----HHCSSEEEEECC----CCCEEE--CSHH-HHHHHHH
T ss_pred HHHHHHHHCCCCCCCEEEEECHH---------HHHHHHHH----HCCCCEEEEECCCCCCCCEEEE--CCHH-HHHHHHH
T ss_conf 99999998798999979995735---------66577897----5699889970999988898981--8999-9999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCC--EEEECC-CCCCEEEEEECCHH
Q ss_conf 508975221377433345643499540478970238999887447876112899898--465268-99931124628998
Q 001636 183 KVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG--VVMRNP-DGKEVRYPVLLTPN 259 (1040)
Q Consensus 183 kign~sS~~~p~l~~~r~~gsyIyEEFi~~~G~DVKvytVGp~~vhAe~RKSPvvDG--~vrrN~-hgke~r~~v~Ls~~ 259 (1040)
. ..+.+..+|+||||+ |.++.|.++|+++.++..+... .+ .++.+. ++|...+|..++++
T Consensus 164 ~-------------~~~~~~~~lvee~i~--G~e~~v~v~~g~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~p~~l~~~ 226 (307)
T 3r5x_A 164 T-------------VFEWDSEVVIEKYIK--GEEITCSIFDGKQLPIISIRHA--AEFFDYNAKYDDASTIEEVIELPAE 226 (307)
T ss_dssp H-------------HHHHCSEEEEEECCC--SEEEEEEEETTEECCCEEEEEE--EEEETTEEEEEEEEEEEEECCCCHH
T ss_pred H-------------HHHCCCCEEEECCCC--CEEEEEEEECCEEEEEEEEECC--CCCCCHHHCCCCCCCEEECCCCCHH
T ss_conf 9-------------984399899987818--7799999999998667999718--8635766537899986856899999
Q ss_pred H----HHHHHHHHHHHCCE-EEEEEEEEECCCEEEEEECCC------EEC-----CCCHHHHHHHHHHHHHHH
Q ss_conf 8----99999999993690-415756641899089941471------201-----265466999999999999
Q 001636 260 E----KQMAREVCIAFRQA-VCGFDLLRCEGRSYVCDVNGW------SFV-----KNSYKYYDDAACVLRKMF 316 (1040)
Q Consensus 260 E----k~iA~kv~~afgq~-VcGfDLLRs~g~s~V~DVNGw------SFV-----K~n~kYYDdcA~ILr~~~ 316 (1040)
+ +++|.++++++|.. ++++|++..+|++||+|||.. |.+ .....|-+-++.||..-.
T Consensus 227 ~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~g~~~vlEiN~rpg~~~~s~~~~~~~~~G~~~~~li~~ll~~a~ 299 (307)
T 3r5x_A 227 LKERVNKASLACYKALKCSVYARVDMMVKDGIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLLDMIIETSL 299 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCCSEEEEEEEEETTEEEEEEEESSCCCSTTSHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 9999999999999995998648889999999289999729999885579999999829999999999999999
Done!