Query 001638
Match_columns 1039
No_of_seqs 556 out of 3439
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 05:44:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001638.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001638hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 7E-236 2E-240 1995.3 69.3 993 4-1018 2-1011(1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 4E-161 9E-166 1381.4 63.5 879 119-1016 8-969 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 7E-153 1E-157 1448.6 102.1 917 86-1014 9-940 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-143 3E-148 1361.3 96.5 864 119-1014 11-1046(1053)
5 TIGR01522 ATPase-IIA2_Ca golgi 100.0 3E-141 8E-146 1333.9 96.9 846 119-1014 8-881 (884)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1E-140 3E-145 1338.9 96.6 874 119-1014 21-984 (997)
7 COG0474 MgtA Cation transport 100.0 5E-138 1E-142 1300.1 85.0 842 122-1002 32-901 (917)
8 PRK15122 magnesium-transportin 100.0 5E-135 1E-139 1271.3 92.5 829 119-1015 31-897 (903)
9 TIGR01116 ATPase-IIA1_Ca sarco 100.0 3E-134 7E-139 1273.2 91.7 836 164-1013 1-916 (917)
10 PRK10517 magnesium-transportin 100.0 2E-133 4E-138 1254.4 90.2 819 119-1014 53-896 (902)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 5E-133 1E-137 1251.8 93.9 819 119-1015 19-862 (867)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 2E-120 4E-125 1125.3 84.7 744 134-973 1-751 (755)
13 TIGR01657 P-ATPase-V P-type AT 100.0 2E-118 4E-123 1143.4 79.1 794 132-989 137-1045(1054)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 5E-122 1E-126 1055.1 36.7 872 118-1014 42-1006(1019)
15 TIGR01652 ATPase-Plipid phosph 100.0 6E-108 1E-112 1050.5 73.3 829 147-1018 1-1049(1057)
16 PLN03190 aminophospholipid tra 100.0 2E-100 3E-105 970.8 78.6 835 146-1018 86-1144(1178)
17 PRK14010 potassium-transportin 100.0 4E-93 8.7E-98 853.3 62.3 575 166-860 28-629 (673)
18 PRK01122 potassium-transportin 100.0 2E-91 4.3E-96 839.4 64.9 581 165-860 28-633 (679)
19 TIGR01497 kdpB K+-transporting 100.0 1.6E-87 3.4E-92 803.7 62.1 546 165-823 27-583 (675)
20 KOG0208 Cation transport ATPas 100.0 1.5E-86 3.3E-91 773.6 54.1 776 131-967 157-1068(1140)
21 KOG0205 Plasma membrane H+-tra 100.0 7.6E-87 1.7E-91 743.1 41.2 635 118-825 21-661 (942)
22 KOG0206 P-type ATPase [General 100.0 3.4E-86 7.4E-91 810.3 30.8 838 143-1018 28-1079(1151)
23 KOG0210 P-type ATPase [Inorgan 100.0 5.8E-83 1.3E-87 714.7 43.1 805 143-1018 75-1043(1051)
24 COG2217 ZntA Cation transport 100.0 6.7E-80 1.4E-84 739.0 54.0 545 158-831 132-682 (713)
25 PRK11033 zntA zinc/cadmium/mer 100.0 1.3E-76 2.8E-81 731.9 61.5 520 197-858 206-727 (741)
26 TIGR01494 ATPase_P-type ATPase 100.0 2E-76 4.4E-81 707.6 55.8 492 206-859 5-498 (499)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 2.3E-74 5E-79 696.2 55.3 524 177-832 6-531 (556)
28 KOG0207 Cation transport ATPas 100.0 2.4E-75 5.2E-80 681.9 41.7 525 194-831 337-868 (951)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 6.4E-73 1.4E-77 681.6 56.0 498 195-832 51-550 (562)
30 TIGR01512 ATPase-IB2_Cd heavy 100.0 7E-73 1.5E-77 679.1 54.2 504 176-831 5-509 (536)
31 PRK10671 copA copper exporting 100.0 1.3E-71 2.7E-76 701.0 59.4 510 195-829 283-793 (834)
32 KOG0209 P-type ATPase [Inorgan 100.0 1.5E-69 3.3E-74 617.4 49.3 816 133-1018 161-1153(1160)
33 COG2216 KdpB High-affinity K+ 100.0 1.4E-59 3E-64 515.3 36.6 540 211-861 80-636 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.9E-33 6.2E-38 302.1 23.2 225 203-443 2-230 (230)
35 PF00689 Cation_ATPase_C: Cati 99.9 8.6E-25 1.9E-29 227.3 14.9 176 837-1012 1-182 (182)
36 PF00702 Hydrolase: haloacid d 99.9 9.2E-23 2E-27 217.2 12.2 97 645-767 115-215 (215)
37 KOG4383 Uncharacterized conser 99.9 7.3E-19 1.6E-23 198.2 37.7 290 580-872 698-1149(1354)
38 PF12515 CaATP_NAI: Ca2+-ATPas 99.6 1.5E-15 3.3E-20 115.2 2.8 46 4-49 1-46 (47)
39 PF13246 Hydrolase_like2: Puta 99.5 1.2E-14 2.5E-19 132.6 7.5 72 519-592 18-91 (91)
40 COG4087 Soluble P-type ATPase 99.5 2.7E-13 5.9E-18 125.7 10.7 126 646-800 19-146 (152)
41 PF00690 Cation_ATPase_N: Cati 99.2 3.9E-11 8.5E-16 103.7 7.5 67 117-183 3-69 (69)
42 smart00831 Cation_ATPase_N Cat 99.1 2.5E-10 5.5E-15 97.1 7.0 62 126-187 2-63 (64)
43 PRK10513 sugar phosphate phosp 99.0 2.4E-09 5.2E-14 118.6 13.8 67 734-801 196-265 (270)
44 COG0561 Cof Predicted hydrolas 99.0 6.1E-09 1.3E-13 115.0 14.5 144 658-802 21-259 (264)
45 PRK11133 serB phosphoserine ph 99.0 2.8E-09 6E-14 120.0 11.8 129 657-801 181-316 (322)
46 TIGR02137 HSK-PSP phosphoserin 98.9 5E-09 1.1E-13 110.6 11.1 128 657-803 68-198 (203)
47 TIGR01487 SPP-like sucrose-pho 98.9 7.6E-09 1.6E-13 110.6 12.5 142 657-799 18-214 (215)
48 PRK15126 thiamin pyrimidine py 98.9 9.9E-09 2.2E-13 113.8 13.4 144 657-801 19-259 (272)
49 PRK01158 phosphoglycolate phos 98.9 1E-08 2.2E-13 110.6 13.0 143 658-801 21-226 (230)
50 PRK10976 putative hydrolase; P 98.9 1.6E-08 3.4E-13 111.8 14.3 67 734-801 190-261 (266)
51 TIGR00338 serB phosphoserine p 98.9 9.9E-09 2.1E-13 109.9 10.4 128 657-799 85-218 (219)
52 PF08282 Hydrolase_3: haloacid 98.8 1.8E-08 3.9E-13 109.5 12.3 144 656-800 14-254 (254)
53 TIGR01482 SPP-subfamily Sucros 98.8 2.7E-08 6E-13 106.9 12.5 144 657-801 15-222 (225)
54 PLN02887 hydrolase family prot 98.8 4.7E-08 1E-12 117.6 14.9 67 734-801 507-576 (580)
55 COG0560 SerB Phosphoserine pho 98.8 3.5E-08 7.5E-13 104.7 11.1 121 656-789 76-200 (212)
56 TIGR02726 phenyl_P_delta pheny 98.7 5E-08 1.1E-12 99.5 9.6 101 664-793 41-143 (169)
57 PRK10530 pyridoxal phosphate ( 98.7 1.6E-07 3.5E-12 104.0 14.2 67 734-801 199-268 (272)
58 TIGR01670 YrbI-phosphatas 3-de 98.7 9.5E-08 2E-12 96.5 10.7 98 665-792 36-136 (154)
59 TIGR00099 Cof-subfamily Cof su 98.6 3.7E-07 8E-12 100.3 12.7 142 657-799 16-255 (256)
60 TIGR01486 HAD-SF-IIB-MPGP mann 98.6 6.4E-07 1.4E-11 98.5 13.5 143 658-801 17-253 (256)
61 PRK09484 3-deoxy-D-manno-octul 98.5 2.9E-07 6.4E-12 95.7 9.7 108 664-801 55-169 (183)
62 PRK03669 mannosyl-3-phosphogly 98.5 7.8E-07 1.7E-11 98.6 12.8 143 658-801 25-265 (271)
63 PRK13582 thrH phosphoserine ph 98.4 1.1E-06 2.4E-11 93.0 11.3 124 657-800 68-195 (205)
64 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 1.3E-06 2.9E-11 91.9 10.2 118 657-785 80-200 (201)
65 PRK00192 mannosyl-3-phosphogly 98.3 5E-06 1.1E-10 92.3 13.3 144 656-801 20-267 (273)
66 PRK08238 hypothetical protein; 98.3 0.00012 2.6E-09 87.0 24.6 99 657-779 72-170 (479)
67 COG1778 Low specificity phosph 98.3 2.7E-06 5.8E-11 82.7 8.2 118 664-811 42-166 (170)
68 KOG1615 Phosphoserine phosphat 98.2 2.8E-06 6E-11 85.2 7.0 104 658-773 89-199 (227)
69 TIGR03333 salvage_mtnX 2-hydro 98.2 9.9E-06 2.1E-10 86.6 11.8 133 656-801 69-209 (214)
70 PLN02954 phosphoserine phospha 98.2 1.3E-05 2.8E-10 86.2 12.7 128 658-799 85-222 (224)
71 TIGR02471 sucr_syn_bact_C sucr 98.2 1.2E-05 2.5E-10 87.4 11.7 67 734-801 159-232 (236)
72 PF12710 HAD: haloacid dehalog 98.1 5.9E-06 1.3E-10 86.3 8.0 92 660-764 92-192 (192)
73 PRK13222 phosphoglycolate phos 98.0 2.9E-05 6.2E-10 83.4 11.4 128 656-802 92-223 (226)
74 TIGR01485 SPP_plant-cyano sucr 98.0 3.7E-05 8E-10 84.2 12.2 146 655-801 19-244 (249)
75 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.7E-05 3.7E-10 83.7 9.2 107 655-773 85-197 (202)
76 COG0546 Gph Predicted phosphat 98.0 3.7E-05 8E-10 82.5 11.6 128 655-801 87-218 (220)
77 TIGR01488 HAD-SF-IB Haloacid D 97.9 1.8E-05 3.8E-10 81.6 7.4 101 658-766 74-177 (177)
78 PRK09552 mtnX 2-hydroxy-3-keto 97.9 4.4E-05 9.5E-10 81.9 10.4 131 657-801 74-213 (219)
79 TIGR01489 DKMTPPase-SF 2,3-dik 97.9 4E-05 8.7E-10 79.7 9.6 115 656-771 71-186 (188)
80 cd01427 HAD_like Haloacid deha 97.9 3.4E-05 7.3E-10 74.9 7.6 113 653-766 20-132 (139)
81 TIGR02461 osmo_MPG_phos mannos 97.9 6.6E-05 1.4E-09 80.8 10.3 44 655-698 13-56 (225)
82 TIGR01454 AHBA_synth_RP 3-amin 97.8 9.2E-05 2E-09 78.4 9.9 125 657-800 75-203 (205)
83 PLN02382 probable sucrose-phos 97.8 0.00022 4.7E-09 83.6 13.0 143 658-801 29-257 (413)
84 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.00033 7.1E-09 75.1 12.5 39 659-697 18-56 (221)
85 PRK10187 trehalose-6-phosphate 97.6 0.00051 1.1E-08 75.9 11.8 137 657-800 36-240 (266)
86 PRK13223 phosphoglycolate phos 97.5 0.00035 7.7E-09 77.5 10.3 126 656-800 100-229 (272)
87 PRK13288 pyrophosphatase PpaX; 97.5 0.00043 9.3E-09 73.8 9.9 124 658-800 83-210 (214)
88 TIGR01449 PGP_bact 2-phosphogl 97.5 0.00049 1.1E-08 73.1 10.1 123 657-798 85-211 (213)
89 PRK12702 mannosyl-3-phosphogly 97.4 0.001 2.2E-08 72.9 11.3 43 656-698 17-59 (302)
90 PRK13226 phosphoglycolate phos 97.4 0.00068 1.5E-08 73.2 9.9 127 657-802 95-226 (229)
91 TIGR01544 HAD-SF-IE haloacid d 97.4 0.0018 3.9E-08 71.0 12.9 138 656-800 120-273 (277)
92 PRK10826 2-deoxyglucose-6-phos 97.3 0.00063 1.4E-08 73.0 8.8 120 657-797 92-216 (222)
93 PRK14502 bifunctional mannosyl 97.3 0.0009 2E-08 81.0 10.7 39 659-697 435-473 (694)
94 PTZ00174 phosphomannomutase; P 97.3 0.0013 2.9E-08 71.8 10.6 53 733-787 187-244 (247)
95 PRK13225 phosphoglycolate phos 97.1 0.0031 6.8E-08 69.9 11.6 122 657-800 142-267 (273)
96 TIGR01484 HAD-SF-IIB HAD-super 97.1 0.0022 4.7E-08 67.8 9.9 116 657-772 17-204 (204)
97 PLN02770 haloacid dehalogenase 97.1 0.0026 5.7E-08 69.6 10.5 120 657-795 108-230 (248)
98 TIGR01545 YfhB_g-proteo haloac 97.1 0.003 6.5E-08 67.2 10.5 107 657-773 94-201 (210)
99 TIGR03351 PhnX-like phosphonat 97.0 0.0029 6.2E-08 67.7 9.8 126 656-799 86-218 (220)
100 TIGR01422 phosphonatase phosph 97.0 0.003 6.5E-08 69.3 9.8 96 657-768 99-195 (253)
101 PLN03243 haloacid dehalogenase 97.0 0.0037 7.9E-08 68.9 10.2 122 657-797 109-231 (260)
102 TIGR01548 HAD-SF-IA-hyp1 haloa 96.9 0.0022 4.7E-08 67.5 7.9 94 655-766 104-197 (197)
103 PRK11590 hypothetical protein; 96.9 0.0052 1.1E-07 65.5 10.8 106 657-773 95-202 (211)
104 PRK13478 phosphonoacetaldehyde 96.9 0.0054 1.2E-07 67.9 10.6 123 657-800 101-254 (267)
105 PRK14501 putative bifunctional 96.8 0.014 3.1E-07 73.9 14.7 170 610-801 480-721 (726)
106 PF05116 S6PP: Sucrose-6F-phos 96.7 0.003 6.4E-08 69.1 7.2 46 733-779 164-212 (247)
107 PRK06698 bifunctional 5'-methy 96.7 0.0075 1.6E-07 72.2 11.0 123 657-801 330-454 (459)
108 TIGR01672 AphA HAD superfamily 96.6 0.0046 1E-07 66.8 7.4 87 658-768 115-205 (237)
109 PRK11587 putative phosphatase; 96.6 0.0095 2E-07 63.8 9.8 115 657-790 83-199 (218)
110 smart00775 LNS2 LNS2 domain. T 96.5 0.012 2.6E-07 59.6 9.1 103 655-769 25-141 (157)
111 PRK06769 hypothetical protein; 96.4 0.014 3.1E-07 60.0 9.2 107 644-770 11-133 (173)
112 COG4030 Uncharacterized protei 96.3 0.018 3.9E-07 59.6 9.0 142 658-801 84-262 (315)
113 TIGR01428 HAD_type_II 2-haloal 96.3 0.011 2.4E-07 62.0 8.1 94 657-769 92-187 (198)
114 TIGR01662 HAD-SF-IIIA HAD-supe 96.3 0.019 4.2E-07 56.0 9.2 92 656-768 24-125 (132)
115 PLN02575 haloacid dehalogenase 96.3 0.018 3.9E-07 66.3 9.9 120 657-796 216-337 (381)
116 PRK11009 aphA acid phosphatase 96.2 0.011 2.3E-07 63.9 7.3 86 658-769 115-206 (237)
117 TIGR02253 CTE7 HAD superfamily 96.2 0.012 2.6E-07 62.9 7.6 93 657-768 94-189 (221)
118 TIGR01509 HAD-SF-IA-v3 haloaci 96.2 0.016 3.4E-07 59.7 8.1 94 657-768 85-178 (183)
119 TIGR01990 bPGM beta-phosphoglu 96.1 0.0083 1.8E-07 62.1 5.9 94 657-769 87-180 (185)
120 PHA02530 pseT polynucleotide k 96.0 0.015 3.4E-07 65.3 7.4 108 654-770 184-292 (300)
121 PLN02940 riboflavin kinase 95.9 0.018 3.8E-07 67.2 8.0 116 657-789 93-211 (382)
122 TIGR02254 YjjG/YfnB HAD superf 95.9 0.021 4.6E-07 61.0 8.0 119 657-798 97-222 (224)
123 PRK08942 D,D-heptose 1,7-bisph 95.9 0.05 1.1E-06 56.4 10.5 126 658-800 30-176 (181)
124 COG4359 Uncharacterized conser 95.9 0.022 4.7E-07 57.4 7.0 100 657-772 73-184 (220)
125 TIGR02009 PGMB-YQAB-SF beta-ph 95.8 0.014 3.1E-07 60.4 6.0 92 657-769 88-181 (185)
126 PRK14988 GMP/IMP nucleotidase; 95.8 0.031 6.7E-07 60.2 8.4 95 657-770 93-189 (224)
127 PLN02580 trehalose-phosphatase 95.8 0.1 2.2E-06 60.2 12.8 63 733-800 300-373 (384)
128 PF13419 HAD_2: Haloacid dehal 95.7 0.02 4.3E-07 58.0 6.3 97 656-769 76-172 (176)
129 TIGR01685 MDP-1 magnesium-depe 95.7 0.043 9.4E-07 56.4 8.5 114 645-771 33-154 (174)
130 PRK09449 dUMP phosphatase; Pro 95.6 0.041 8.9E-07 59.0 8.7 122 657-800 95-222 (224)
131 PLN02779 haloacid dehalogenase 95.3 0.055 1.2E-06 60.5 8.5 116 657-789 144-263 (286)
132 PLN02811 hydrolase 94.9 0.065 1.4E-06 57.4 7.5 96 657-769 78-179 (220)
133 TIGR01549 HAD-SF-IA-v1 haloaci 94.9 0.064 1.4E-06 53.7 6.8 90 658-767 65-154 (154)
134 TIGR02252 DREG-2 REG-2-like, H 94.7 0.077 1.7E-06 55.9 7.1 92 657-768 105-199 (203)
135 TIGR01668 YqeG_hyp_ppase HAD s 94.5 0.093 2E-06 53.9 7.1 85 656-768 42-130 (170)
136 COG3769 Predicted hydrolase (H 94.5 0.23 5.1E-06 51.6 9.6 37 661-697 27-63 (274)
137 TIGR00213 GmhB_yaeD D,D-heptos 94.2 0.18 3.9E-06 52.0 8.6 27 658-684 27-53 (176)
138 PLN02205 alpha,alpha-trehalose 94.1 0.31 6.6E-06 62.4 12.0 50 645-694 604-654 (854)
139 PF06888 Put_Phosphatase: Puta 94.1 0.11 2.4E-06 55.9 6.8 112 657-770 71-195 (234)
140 smart00577 CPDc catalytic doma 94.1 0.066 1.4E-06 53.6 4.9 92 657-771 45-139 (148)
141 COG2179 Predicted hydrolase of 94.1 0.36 7.8E-06 48.4 9.7 110 614-768 20-132 (175)
142 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.9 0.33 7.1E-06 52.9 10.3 94 650-767 17-115 (242)
143 TIGR01533 lipo_e_P4 5'-nucleot 93.9 0.31 6.7E-06 53.6 9.9 87 655-764 116-205 (266)
144 TIGR01656 Histidinol-ppas hist 93.8 0.12 2.6E-06 51.6 6.1 96 657-769 27-140 (147)
145 PF13344 Hydrolase_6: Haloacid 93.7 0.099 2.2E-06 48.7 4.9 89 650-767 7-99 (101)
146 PLN02919 haloacid dehalogenase 93.7 0.17 3.7E-06 66.5 8.8 135 658-809 162-300 (1057)
147 TIGR01675 plant-AP plant acid 93.3 0.32 6.9E-06 52.1 8.5 89 655-760 118-209 (229)
148 PRK05446 imidazole glycerol-ph 93.3 0.22 4.7E-06 57.1 7.7 98 656-770 29-144 (354)
149 TIGR01261 hisB_Nterm histidino 92.8 0.19 4E-06 51.2 5.6 97 657-770 29-143 (161)
150 TIGR01664 DNA-3'-Pase DNA 3'-p 92.4 0.34 7.3E-06 49.6 7.0 92 658-770 43-158 (166)
151 TIGR02247 HAD-1A3-hyp Epoxide 92.3 0.15 3.2E-06 54.1 4.5 97 656-769 93-191 (211)
152 TIGR01691 enolase-ppase 2,3-di 92.2 0.45 9.8E-06 51.0 7.9 97 656-771 94-193 (220)
153 TIGR01681 HAD-SF-IIIC HAD-supe 92.0 0.37 8E-06 47.0 6.4 39 657-695 29-68 (128)
154 PLN03017 trehalose-phosphatase 92.0 2 4.3E-05 49.3 13.1 47 644-691 118-166 (366)
155 TIGR00685 T6PP trehalose-phosp 91.8 0.27 5.9E-06 53.6 5.9 71 726-801 159-240 (244)
156 PRK10563 6-phosphogluconate ph 91.7 0.2 4.3E-06 53.6 4.6 95 657-771 88-183 (221)
157 PF09419 PGP_phosphatase: Mito 91.3 0.75 1.6E-05 46.9 7.9 83 655-764 57-154 (168)
158 TIGR01686 FkbH FkbH-like domai 91.0 0.58 1.3E-05 53.2 7.7 91 657-772 31-128 (320)
159 PRK09456 ?-D-glucose-1-phospha 90.8 0.52 1.1E-05 49.5 6.7 94 657-769 84-180 (199)
160 PLN02423 phosphomannomutase 90.0 2.1 4.6E-05 46.7 10.7 33 656-689 23-55 (245)
161 PLN02645 phosphoglycolate phos 89.9 0.73 1.6E-05 52.2 7.2 48 651-698 38-88 (311)
162 PF08235 LNS2: LNS2 (Lipin/Ned 89.8 1.2 2.6E-05 44.8 7.6 106 651-769 22-141 (157)
163 KOG3120 Predicted haloacid deh 88.6 0.64 1.4E-05 48.6 4.9 121 657-779 84-215 (256)
164 TIGR01993 Pyr-5-nucltdase pyri 88.6 0.89 1.9E-05 47.0 6.2 92 657-769 84-180 (184)
165 PRK10725 fructose-1-P/6-phosph 88.0 0.97 2.1E-05 46.8 6.1 92 659-769 90-181 (188)
166 PLN02177 glycerol-3-phosphate 87.3 7.3 0.00016 46.9 13.6 98 658-774 111-215 (497)
167 KOG3040 Predicted sugar phosph 86.8 3 6.4E-05 43.3 8.3 52 647-698 13-67 (262)
168 PHA02597 30.2 hypothetical pro 86.1 1.8 3.9E-05 45.2 6.9 93 657-769 74-169 (197)
169 COG0637 Predicted phosphatase/ 85.7 1.5 3.2E-05 47.1 6.1 98 656-770 85-182 (221)
170 TIGR01684 viral_ppase viral ph 84.9 1.9 4.2E-05 47.7 6.4 53 658-710 146-199 (301)
171 TIGR01452 PGP_euk phosphoglyco 83.7 11 0.00023 42.0 12.0 46 653-698 14-62 (279)
172 PRK10444 UMP phosphatase; Prov 83.5 2.6 5.7E-05 46.1 6.8 48 650-697 10-60 (248)
173 PF03767 Acid_phosphat_B: HAD 83.3 1.8 3.9E-05 46.7 5.4 90 656-762 114-207 (229)
174 PHA03398 viral phosphatase sup 80.5 3.7 8E-05 45.5 6.5 52 658-709 148-200 (303)
175 COG3700 AphA Acid phosphatase 79.7 3.4 7.4E-05 41.7 5.3 88 658-770 115-208 (237)
176 TIGR01680 Veg_Stor_Prot vegeta 78.9 10 0.00022 41.6 9.2 88 655-760 143-235 (275)
177 PLN02151 trehalose-phosphatase 78.8 22 0.00047 40.9 12.2 47 645-692 106-154 (354)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 78.1 2.7 5.8E-05 46.2 4.6 41 658-698 22-65 (257)
179 TIGR01457 HAD-SF-IIA-hyp2 HAD- 78.0 4.4 9.4E-05 44.3 6.2 47 652-698 12-61 (249)
180 TIGR01689 EcbF-BcbF capsule bi 77.7 5.1 0.00011 38.9 5.9 32 656-687 23-54 (126)
181 PF05822 UMPH-1: Pyrimidine 5' 77.0 9.1 0.0002 41.5 8.1 134 656-800 89-241 (246)
182 TIGR02251 HIF-SF_euk Dullard-l 75.6 2.1 4.6E-05 43.5 2.7 40 657-697 42-81 (162)
183 PRK10748 flavin mononucleotide 74.6 5.8 0.00013 43.0 6.0 91 657-772 113-206 (238)
184 TIGR01493 HAD-SF-IA-v2 Haloaci 70.9 3.4 7.4E-05 42.1 3.0 86 657-766 90-175 (175)
185 COG1877 OtsB Trehalose-6-phosp 67.7 30 0.00066 38.1 9.6 128 646-773 29-228 (266)
186 TIGR01663 PNK-3'Pase polynucle 65.4 17 0.00036 44.2 7.7 40 658-697 198-249 (526)
187 PF06570 DUF1129: Protein of u 64.5 97 0.0021 32.8 12.5 19 992-1010 180-198 (206)
188 TIGR01106 ATPase-IIC_X-K sodiu 63.7 98 0.0021 41.1 14.9 36 242-278 161-196 (997)
189 PF00389 2-Hacid_dh: D-isomer 63.5 77 0.0017 30.7 10.8 79 726-814 42-123 (133)
190 COG0241 HisB Histidinol phosph 63.2 14 0.0003 38.3 5.5 96 658-769 32-144 (181)
191 PF02358 Trehalose_PPase: Treh 63.0 20 0.00043 38.7 7.1 64 726-790 157-233 (235)
192 TIGR02244 HAD-IG-Ncltidse HAD 60.7 31 0.00067 39.6 8.3 102 659-764 186-312 (343)
193 TIGR01657 P-ATPase-V P-type AT 59.5 3.3E+02 0.0072 36.5 18.8 77 201-289 193-273 (1054)
194 COG1011 Predicted hydrolase (H 59.5 30 0.00065 36.7 7.7 122 657-800 99-226 (229)
195 TIGR01647 ATPase-IIIA_H plasma 57.9 1.7E+02 0.0037 37.5 15.3 199 203-428 57-263 (755)
196 PTZ00445 p36-lilke protein; Pr 56.9 23 0.00049 37.5 5.8 64 608-686 29-104 (219)
197 PRK14194 bifunctional 5,10-met 56.1 43 0.00094 37.6 8.3 137 654-790 12-209 (301)
198 TIGR01116 ATPase-IIA1_Ca sarco 51.0 2.7E+02 0.0059 36.6 15.7 80 200-289 35-115 (917)
199 PRK14188 bifunctional 5,10-met 50.7 57 0.0012 36.6 8.2 65 726-790 136-208 (296)
200 PRK14179 bifunctional 5,10-met 49.0 82 0.0018 35.1 9.0 64 727-790 137-208 (284)
201 TIGR01517 ATPase-IIB_Ca plasma 45.8 2.1E+02 0.0046 37.7 13.7 175 241-426 185-359 (941)
202 TIGR01458 HAD-SF-IIA-hyp3 HAD- 44.2 1.2E+02 0.0027 33.1 9.6 122 660-799 123-253 (257)
203 COG0647 NagD Predicted sugar p 43.6 24 0.00052 39.0 3.8 94 650-772 17-115 (269)
204 COG0474 MgtA Cation transport 43.6 8.7E+02 0.019 32.0 18.6 60 206-275 108-167 (917)
205 PF13380 CoA_binding_2: CoA bi 38.5 37 0.00081 32.4 3.8 40 658-697 64-104 (116)
206 TIGR02250 FCP1_euk FCP1-like p 37.5 50 0.0011 33.3 4.8 41 657-698 58-98 (156)
207 PRK14174 bifunctional 5,10-met 37.3 1.1E+02 0.0024 34.3 7.8 135 655-790 10-213 (295)
208 PRK14184 bifunctional 5,10-met 37.1 1.1E+02 0.0025 34.0 7.8 135 655-790 10-211 (286)
209 PRK14170 bifunctional 5,10-met 37.1 1.1E+02 0.0024 34.0 7.7 45 654-698 10-63 (284)
210 PRK14169 bifunctional 5,10-met 37.1 1.3E+02 0.0028 33.5 8.2 136 655-790 10-206 (282)
211 COG2503 Predicted secreted aci 36.9 1.6E+02 0.0035 31.9 8.3 82 658-764 123-210 (274)
212 TIGR01456 CECR5 HAD-superfamil 36.4 1.1E+02 0.0025 34.7 8.0 49 650-698 9-65 (321)
213 PF00122 E1-E2_ATPase: E1-E2 A 36.0 1.8E+02 0.0038 31.0 9.1 63 207-278 2-64 (230)
214 TIGR01460 HAD-SF-IIA Haloacid 35.9 73 0.0016 34.4 6.1 48 651-698 8-59 (236)
215 PRK14182 bifunctional 5,10-met 34.6 1.4E+02 0.0031 33.2 8.0 44 655-698 10-62 (282)
216 PRK14042 pyruvate carboxylase 34.1 2.2E+02 0.0047 35.4 10.2 144 625-770 51-223 (596)
217 COG0078 ArgF Ornithine carbamo 33.8 2.2E+02 0.0048 31.9 9.2 75 674-772 100-180 (310)
218 PRK10517 magnesium-transportin 33.2 8.3E+02 0.018 32.1 16.0 85 199-290 120-208 (902)
219 PLN02591 tryptophan synthase 32.9 2.2E+02 0.0047 31.2 9.1 81 660-761 118-202 (250)
220 TIGR01524 ATPase-IIIB_Mg magne 32.8 6.4E+02 0.014 33.0 14.8 21 256-276 139-159 (867)
221 PRK14167 bifunctional 5,10-met 32.7 1.6E+02 0.0034 33.2 8.0 134 654-789 10-210 (297)
222 COG1916 Uncharacterized homolo 32.7 1.4E+02 0.0031 34.1 7.5 42 657-698 96-137 (388)
223 TIGR00216 ispH_lytB (E)-4-hydr 31.7 1.5E+02 0.0031 33.1 7.5 142 607-778 99-266 (280)
224 PRK14191 bifunctional 5,10-met 31.7 1.7E+02 0.0037 32.7 8.0 135 655-790 10-207 (285)
225 PRK14166 bifunctional 5,10-met 31.6 1.6E+02 0.0035 32.8 7.8 136 655-790 10-207 (282)
226 PRK14189 bifunctional 5,10-met 31.4 4.3E+02 0.0094 29.5 11.2 166 602-790 11-208 (285)
227 PRK14190 bifunctional 5,10-met 31.4 1.6E+02 0.0035 32.8 7.8 45 654-698 11-64 (284)
228 PF06506 PrpR_N: Propionate ca 30.3 1.4E+02 0.0029 30.7 6.7 107 661-812 65-172 (176)
229 PF13242 Hydrolase_like: HAD-h 29.9 70 0.0015 27.6 3.8 44 747-790 21-71 (75)
230 PRK14178 bifunctional 5,10-met 28.5 1.8E+02 0.004 32.3 7.6 65 726-790 130-202 (279)
231 CHL00200 trpA tryptophan synth 28.5 2.3E+02 0.005 31.3 8.4 30 732-762 187-216 (263)
232 PRK15122 magnesium-transportin 28.0 9.7E+02 0.021 31.5 15.3 160 241-425 173-351 (903)
233 PF12689 Acid_PPase: Acid Phos 27.8 93 0.002 31.9 4.8 41 657-697 45-86 (169)
234 TIGR02230 ATPase_gene1 F0F1-AT 27.6 2.2E+02 0.0048 26.5 6.7 31 954-984 38-68 (100)
235 PF03120 DNA_ligase_OB: NAD-de 27.5 33 0.00072 30.7 1.3 20 250-269 47-67 (82)
236 PRK02261 methylaspartate mutas 27.5 85 0.0018 31.0 4.4 83 615-698 25-115 (137)
237 PRK14175 bifunctional 5,10-met 27.4 90 0.0019 34.9 5.0 45 654-698 11-64 (286)
238 PRK14186 bifunctional 5,10-met 27.2 2.5E+02 0.0054 31.6 8.4 45 654-698 10-64 (297)
239 KOG3128 Uncharacterized conser 26.8 2.1E+02 0.0046 31.1 7.3 134 658-799 139-289 (298)
240 PF12811 BaxI_1: Bax inhibitor 26.8 9.1E+02 0.02 26.8 13.9 23 985-1007 208-230 (274)
241 TIGR01459 HAD-SF-IIA-hyp4 HAD- 26.4 53 0.0011 35.6 3.0 96 659-769 140-236 (242)
242 cd05017 SIS_PGI_PMI_1 The memb 26.4 1.1E+02 0.0023 29.2 4.7 38 658-697 55-92 (119)
243 TIGR01522 ATPase-IIA2_Ca golgi 26.2 1.4E+03 0.031 29.9 16.5 20 256-275 125-144 (884)
244 PRK01122 potassium-transportin 26.1 1.4E+03 0.031 28.9 15.6 84 197-289 62-147 (679)
245 PF12710 HAD: haloacid dehalog 25.9 34 0.00074 35.0 1.3 13 450-462 1-13 (192)
246 cd02071 MM_CoA_mut_B12_BD meth 24.8 48 0.001 31.8 2.1 82 616-698 22-105 (122)
247 TIGR01501 MthylAspMutase methy 24.8 1E+02 0.0022 30.4 4.2 82 616-698 24-113 (134)
248 TIGR00559 pdxJ pyridoxine 5'-p 24.6 2E+02 0.0044 31.0 6.7 38 659-697 109-146 (237)
249 TIGR00612 ispG_gcpE 1-hydroxy- 23.9 1.7E+02 0.0037 33.2 6.3 90 665-773 215-315 (346)
250 PRK09140 2-dehydro-3-deoxy-6-p 23.8 8.8E+02 0.019 25.6 11.7 175 608-809 22-205 (206)
251 PF15584 Imm44: Immunity prote 23.8 35 0.00075 30.9 0.7 19 255-273 13-31 (94)
252 cd00860 ThrRS_anticodon ThrRS 23.7 1.4E+02 0.0031 26.2 4.9 47 651-697 6-53 (91)
253 PRK01045 ispH 4-hydroxy-3-meth 23.5 2.6E+02 0.0055 31.5 7.7 143 607-778 99-268 (298)
254 COG0272 Lig NAD-dependent DNA 23.5 1.5E+02 0.0033 36.7 6.3 74 250-334 365-440 (667)
255 COG1609 PurR Transcriptional r 23.5 8.2E+02 0.018 27.8 12.2 141 601-757 26-185 (333)
256 PLN02897 tetrahydrofolate dehy 22.4 3.8E+02 0.0082 30.8 8.7 45 654-698 64-118 (345)
257 COG0309 HypE Hydrogenase matur 21.9 3E+02 0.0066 31.3 7.8 84 651-754 219-306 (339)
258 PF10579 Rapsyn_N: Rapsyn N-te 21.8 2.7E+02 0.0058 24.8 5.7 36 13-48 18-53 (80)
259 PRK14183 bifunctional 5,10-met 21.2 4E+02 0.0087 29.7 8.5 63 727-791 136-208 (281)
260 PRK09536 btuD corrinoid ABC tr 21.2 1.2E+02 0.0025 35.8 4.6 138 659-798 175-326 (402)
261 TIGR00739 yajC preprotein tran 21.1 1.3E+02 0.0028 27.1 3.8 8 253-260 38-45 (84)
262 PRK15424 propionate catabolism 21.0 7.5E+02 0.016 30.4 11.6 70 661-758 95-165 (538)
263 cd05013 SIS_RpiR RpiR-like pro 20.4 2.5E+02 0.0053 26.6 6.2 108 661-773 2-112 (139)
264 PRK11507 ribosome-associated p 20.3 1.1E+02 0.0024 26.5 3.0 26 238-263 38-63 (70)
265 PF01455 HupF_HypC: HupF/HypC 20.2 2.3E+02 0.005 24.4 5.0 32 234-265 16-50 (68)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-236 Score=1995.28 Aligned_cols=993 Identities=58% Similarity=0.936 Sum_probs=945.9
Q ss_pred cccCCccCCCCCCCHHHHHhhHHHhhhhcCccccchhhHHhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCcc
Q 001638 4 YLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAEAERKRKKLQEKLRVALYVQKAALHFIDAGSRPIE 83 (1039)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1039)
++.++|..+.+|++.++++|||.|. .+++++|||||.+++++..+....|+ |.|.+..+++|+.+|+++..++ |
T Consensus 2 ~~~~~~~~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~~~~-e 75 (1034)
T KOG0204|consen 2 LLDKDFVVSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAGSRT-E 75 (1034)
T ss_pred Ccccccccccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhcccccc-c
Confidence 4567888888999999999999766 99999999999999999998777777 8999999999999999987653 4
Q ss_pred cccccccccCCcccCHhHHHhhhccCChhHHHHhCCHHHHHHHhCCCCCCCCCH--HHHHHHHhhcCCCccCCCCCCcHH
Q 001638 84 YKLSQETLLAGYGIEPDELESIVRSHNSKAVESRGGVEGLAREVSVSLPDGVAS--EEVSNRQNVYGFNRYAEKPARSFW 161 (1039)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~gv~~~~~~l~t~~~~GL~~--~~~~~r~~~~G~N~~~~~~~~s~~ 161 (1039)
|+. .+++|+|.++++.+|.+.|+++||++|+|+.|+||+..||+. +|..+|++.||.|.+|++++++||
T Consensus 76 ~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl 146 (1034)
T KOG0204|consen 76 YTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFL 146 (1034)
T ss_pred ccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHH
Confidence 433 688999999999999999999999999999999999999987 679999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEe
Q 001638 162 MFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTR 241 (1039)
Q Consensus 162 ~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR 241 (1039)
+|+||+++|.++++|++||++|+++|+++++++++||||++|++++++|++++|++||+|++||++|++++++.+++|+|
T Consensus 147 ~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR 226 (1034)
T KOG0204|consen 147 RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIR 226 (1034)
T ss_pred HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCC-CCceeecccEEeeCCeEEEEEEe
Q 001638 242 DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINR-DRPFLLSGTKVQDGSGKMLVTSV 320 (1039)
Q Consensus 242 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~-~~~~l~sGt~v~~G~~~~~V~~v 320 (1039)
||++++|++.|||||||+.|+.||+|||||++++|++|.+|||+|||||++++|+. .+|||+|||++.+|+|+|+||+|
T Consensus 227 ~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaV 306 (1034)
T KOG0204|consen 227 GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAV 306 (1034)
T ss_pred CCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999986 89999999999999999999999
Q ss_pred ccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchhhhHHHHHHH
Q 001638 321 GMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQI--KHWSSIDAMKLLNYF 398 (1039)
Q Consensus 321 G~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~--~~w~~~~~~~~~~~~ 398 (1039)
|+||+||++|..+.++.+++||||.+|+++|..|+++++.+|++++++++++|+.+.+..++. ..|.......++++|
T Consensus 307 Gmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f 386 (1034)
T KOG0204|consen 307 GMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFF 386 (1034)
T ss_pred eecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHh
Confidence 999999999999999998999999999999999999999999999999999999988776554 466666788999999
Q ss_pred HHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccc
Q 001638 399 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIK 478 (1039)
Q Consensus 399 ~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 478 (1039)
+++++++|+|+|||||+|||++|||+++|||+|++|||+++||||||++++||+|||||||+|+|+|++.|++++.+..+
T Consensus 387 ~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~ 466 (1034)
T KOG0204|consen 387 IIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVN 466 (1034)
T ss_pred hheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876432
Q ss_pred cCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCC--CccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCC
Q 001638 479 SGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDG--RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFN 556 (1039)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~ 556 (1039)
... .+.+++...+++.++++.|++.++..++.+ ..++.|||||+|||.|+..+|++++..|++.++++++|||
T Consensus 467 ~~~-----~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FN 541 (1034)
T KOG0204|consen 467 SPK-----SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFN 541 (1034)
T ss_pred Ccc-----cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccC
Confidence 211 146889999999999999999999887766 7799999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCC-
Q 001638 557 SVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGN- 635 (1039)
Q Consensus 557 s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~- 635 (1039)
|.||||+++++.++.+.| +|||||+|+||.+|++|++.+|+..+++++.++.+++.|+.||++||||+|+|||++...
T Consensus 542 S~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~ 620 (1034)
T KOG0204|consen 542 SVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGP 620 (1034)
T ss_pred cccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCC
Confidence 999999999998873336 999999999999999999999999999999999999999999999999999999995433
Q ss_pred -----CCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcc
Q 001638 636 -----HKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTD 708 (1039)
Q Consensus 636 -----~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~ 708 (1039)
.++++.++.+++++|++||+||+||||++||+.|++|||+|+|+||||..||++||.+|||+++++ .+++|++
T Consensus 621 ~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~e 700 (1034)
T KOG0204|consen 621 DEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKE 700 (1034)
T ss_pred CCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchh
Confidence 123357789999999999999999999999999999999999999999999999999999999887 9999999
Q ss_pred cccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEe
Q 001638 709 FRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVII 788 (1039)
Q Consensus 709 ~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl 788 (1039)
|++++++|+++++++++|+||++|.||+.+|+.|+++ |++||+||||+||+||||+||||+||||.|||+|||+|||||
T Consensus 701 Fr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi 779 (1034)
T KOG0204|consen 701 FRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIII 779 (1034)
T ss_pred hhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEE
Confidence 9999999999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred ecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCcc
Q 001638 789 MDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEG 868 (1039)
Q Consensus 789 ~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~ 868 (1039)
+||||++|+++++|||++|+||+||+|||||+|+++++++|++++..+.+||+++||||+|+|||+|+|||||||||+++
T Consensus 780 ~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~ 859 (1034)
T KOG0204|consen 780 LDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDE 859 (1034)
T ss_pred EcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--ccchhhHHHHHHHHHHHHHHHHHhcccc
Q 001638 869 LMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGPN--ATLILNTFIFNSFVFCQVFNEINSRDME 946 (1039)
Q Consensus 869 lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~~--~~~~~~T~~f~~~v~~qv~n~~~~r~~~ 946 (1039)
+|+|+|++|++|||++.||+||++|++||+++++++.|.|..+|+.+++. .+..++|++||+|||||+||+||+|+++
T Consensus 860 Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~ 939 (1034)
T KOG0204|consen 860 LMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKID 939 (1034)
T ss_pred HhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchh
Confidence 99999999999999999999999999999999999999999999876654 3678899999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHhhhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 947 KINVFRGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 947 ~~~~f~~~~~n~~f~~~~~~~~~~q~~~v~~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
+.|+|+|+++|++|++++.+|+++|+++++|+|.+|+++||+|.||++|+++|+++|++++++|++|++..|
T Consensus 940 ~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~ 1011 (1034)
T KOG0204|consen 940 ERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLP 1011 (1034)
T ss_pred HHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-161 Score=1381.42 Aligned_cols=879 Identities=32% Similarity=0.508 Sum_probs=760.4
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCccc
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVY 198 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~ 198 (1039)
.|++.+..+.||+.+||+.+|+.+|++.||+|+++....+|+|+.+++||.|+...+|+.+|++|+++. .|-
T Consensus 8 ~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~--------~~~ 79 (972)
T KOG0202|consen 8 SVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA--------DFD 79 (972)
T ss_pred cHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------hcc
Confidence 688899999999999999999999999999999999999999999999999999999999999999987 355
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS 278 (1039)
Q Consensus 199 d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~ 278 (1039)
|+++|.+++++++.+..+++|+.++....|.+. .+..++|+|+|+.+.++++||||||||.|+.||+||||.++++..+
T Consensus 80 e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s 158 (972)
T KOG0202|consen 80 EPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS 158 (972)
T ss_pred cceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee
Confidence 788999999999999999999999999999864 5779999999999999999999999999999999999999999999
Q ss_pred eeEeccCCCCCCCccccC-------------CCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHH
Q 001638 279 LTIDESSLSGETEPVHIN-------------RDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQV 345 (1039)
Q Consensus 279 l~VDES~LTGEs~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~ 345 (1039)
|.||||+|||||.|+.|. .+.|++|+||.|..|.++++|++||.+|++|++...+++.++++||||+
T Consensus 159 l~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk 238 (972)
T KOG0202|consen 159 LRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQK 238 (972)
T ss_pred eeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHH
Confidence 999999999999999995 3467899999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHH
Q 001638 346 KLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHH-QIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFA 424 (1039)
Q Consensus 346 ~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~ 424 (1039)
++|.+.+.+.++..++++.+.++- +.++. .. ...+| +.....+|.+++++.|+|+|||||..+|++||.+
T Consensus 239 ~ld~~G~qLs~~is~i~v~v~~~n-ig~f~----~p~~~g~~----fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG 309 (972)
T KOG0202|consen 239 KLDEFGKQLSKVISFICVGVWLLN-IGHFL----DPVHGGSW----FKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALG 309 (972)
T ss_pred HHHHHHHHHHHHheehhhhHHHhh-hhhhc----cccccccc----hhchhhhhhHHHHHHHHhccCCCcchhhhhHHHh
Confidence 999999999865544443332221 12222 10 01123 3456789999999999999999999999999999
Q ss_pred HHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccc------c---CCcc----c---ccCC
Q 001638 425 MKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIK------S---GDNE----K---LLKP 488 (1039)
Q Consensus 425 ~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~---~~~~----~---~~~~ 488 (1039)
.+||+|++++||++.++||||.+++||+|||||||+|+|++.++|+.+...... . .... . ....
T Consensus 310 ~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~ 389 (972)
T KOG0202|consen 310 TRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDK 389 (972)
T ss_pred HHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccccc
Confidence 999999999999999999999999999999999999999999999876432111 0 0000 0 0001
Q ss_pred CCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCccc---------------ccccccEEEEe
Q 001638 489 SVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTF---------------HREESAIVKVE 553 (1039)
Q Consensus 489 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~---------------~~~~~~il~~~ 553 (1039)
....+.+.-+++..+.|+.+.+..++.+.++..|.|||.||..++.++|+.-.. ....++.+.++
T Consensus 390 ~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~el 469 (972)
T KOG0202|consen 390 AGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAEL 469 (972)
T ss_pred ccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEe
Confidence 112233344445445555555554444667789999999999999999875433 12234567999
Q ss_pred cCCCCCCceEEEEEcCCC-CeEEEEEeCcHHHHHhhhhhhhccCC-ccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEe
Q 001638 554 PFNSVKKRMSVLVSLPNN-GGFRVFCKGASEIILNMCDKIINADG-KAVPISEEQRKNLTNVINGFSSEALRTLCLAFQD 631 (1039)
Q Consensus 554 pF~s~rkrmsvvv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~ 631 (1039)
||+|+||+|+|.+..+.+ .++.+|+|||+|.|+++|++++..+| ...||++..|+.+.+...+|+++|||||++|+++
T Consensus 470 pFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~ 549 (972)
T KOG0202|consen 470 PFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKD 549 (972)
T ss_pred ecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccC
Confidence 999999999999987652 35899999999999999998887776 5589999999999999999999999999999998
Q ss_pred cCC-CC--------CcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC-
Q 001638 632 IKG-NH--------KAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG- 701 (1039)
Q Consensus 632 l~~-~~--------~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~- 701 (1039)
... .+ ......|.||+|+|++||.||||+|++++|+.|+++||+|+|+|||+..||.+||+++||..++.
T Consensus 550 ~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed 629 (972)
T KOG0202|consen 550 SPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED 629 (972)
T ss_pred CcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc
Confidence 764 21 12235689999999999999999999999999999999999999999999999999999998766
Q ss_pred ---ceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcH
Q 001638 702 ---LAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778 (1039)
Q Consensus 702 ---~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~ 778 (1039)
.+++|++|+.++++|+++.+.+..||+|++|++|.++|+.||+. |++|||||||+||+||||.||||||||++||+
T Consensus 630 ~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~GTd 708 (972)
T KOG0202|consen 630 VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISGTD 708 (972)
T ss_pred ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCccH
Confidence 89999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHh
Q 001638 779 VAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGAL 858 (1039)
Q Consensus 779 ~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~al 858 (1039)
+||++||+||.||||++|+.++++||.+|+||++|+.|+++.|+.++.+.|+++.+..+.||+|+|+||+|++||.+||.
T Consensus 709 VaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~ 788 (972)
T KOG0202|consen 709 VAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPAT 788 (972)
T ss_pred hhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH---HHHHHhcc-c---------cccc----CCCC---
Q 001638 859 ALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVL---GVLTFCGK-K---------ILKL----SGPN--- 918 (1039)
Q Consensus 859 ala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~---~~l~~~~~-~---------~~~~----~~~~--- 918 (1039)
+|+.|||++|+|+|||++.++++++...+.+++..++|-.+.. +...+.+. . |..+ .+.+
T Consensus 789 aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~ 868 (972)
T KOG0202|consen 789 ALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAV 868 (972)
T ss_pred hcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhh
Confidence 9999999999999999999999999999988888887754322 11222210 0 0000 0000
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHH--HhhhhhhhcccCCChHHHHHH
Q 001638 919 -ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVII--VELLGTFATTVPLNWKLWLAS 995 (1039)
Q Consensus 919 -~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~--v~~~~~~~~~~~l~~~~w~~~ 995 (1039)
......||.|.+||+...||.+|||+.++.-+..++|.|+||+++++++++.|+++ ++++...|++.||++.+|++.
T Consensus 869 F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~v 948 (972)
T KOG0202|consen 869 FEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLV 948 (972)
T ss_pred hcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHH
Confidence 11123589999999999999999999876555669999999999999999998765 578999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCC
Q 001638 996 VVIGAISMPFGVLLKCIPVGT 1016 (1039)
Q Consensus 996 i~~~~~~~~~~~~~k~i~~~~ 1016 (1039)
+.+.+..+++++++|++.+..
T Consensus 949 l~~s~~V~i~dEilK~~~R~~ 969 (972)
T KOG0202|consen 949 LAISSPVIIVDEILKFIARNY 969 (972)
T ss_pred HHHhhhhhhHHHHHHHHHHhc
Confidence 999999999999999998753
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=6.5e-153 Score=1448.59 Aligned_cols=917 Identities=51% Similarity=0.839 Sum_probs=815.6
Q ss_pred cccccccCCcccCHhHHHhhhcc-CChhHHHHhCCHHHHHHHhCCCCCCCCC--HHHHHHHHhhcCCCccCCCCCCcHHH
Q 001638 86 LSQETLLAGYGIEPDELESIVRS-HNSKAVESRGGVEGLAREVSVSLPDGVA--SEEVSNRQNVYGFNRYAEKPARSFWM 162 (1039)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~~gv~~~~~~l~t~~~~GL~--~~~~~~r~~~~G~N~~~~~~~~s~~~ 162 (1039)
.++....+||.+..++++.+.+. ++.+.|+++||++++++.|++|.+.||+ ++|+++|+++||+|+++.++++++|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~ 88 (941)
T TIGR01517 9 SIRDNFTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQ 88 (941)
T ss_pred chhhccCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHH
Confidence 34555678999999999998866 5678899999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHhhccCC-----CCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceE
Q 001638 163 FVWEALHDLTLIILMICAAVSIGVGIP-----TEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIV 237 (1039)
Q Consensus 163 ~~~~~~~~~~~~il~v~a~ls~~~~~~-----~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v 237 (1039)
+++++|+++++++|++++++|+++++. .++..+.|++++.|+++++++++++++++|+++++++++++..++.++
T Consensus 89 ~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~ 168 (941)
T TIGR01517 89 IVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKI 168 (941)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCce
Confidence 999999999999999999999998743 234456899999999999999999999999999999999876667899
Q ss_pred EEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCC-CceeecccEEeeCCeEEE
Q 001638 238 QVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD-RPFLLSGTKVQDGSGKML 316 (1039)
Q Consensus 238 ~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~-~~~l~sGt~v~~G~~~~~ 316 (1039)
+|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|+++++
T Consensus 169 ~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~i 248 (941)
T TIGR01517 169 AVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRML 248 (941)
T ss_pred EEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEE
Confidence 9999999999999999999999999999999999999998889999999999999999754 468999999999999999
Q ss_pred EEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHH
Q 001638 317 VTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLN 396 (1039)
Q Consensus 317 V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 396 (1039)
|++||.+|++||+++++.+++ +++|+|++++++++.+.++++.+++++|+++++.++......+. ... ......+..
T Consensus 249 V~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ 325 (941)
T TIGR01517 249 VTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDG-RDT-EEDAQTFLD 325 (941)
T ss_pred EEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc-ccc-chhhHHHHH
Confidence 999999999999999988754 67899999999999999998888888887765544332111000 000 011235677
Q ss_pred HHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccc
Q 001638 397 YFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKT 476 (1039)
Q Consensus 397 ~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 476 (1039)
.+..++++++++||||||+++|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|++++..+..++
T Consensus 326 ~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 405 (941)
T TIGR01517 326 HFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFN 405 (941)
T ss_pred HHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEe
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999987654332
Q ss_pred cccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCC
Q 001638 477 IKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFN 556 (1039)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~ 556 (1039)
... .....++...+++..++++|+......+..+..+..|||+|.|+++++.+.|.+....+..+++++.+||+
T Consensus 406 ~~~------~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~ 479 (941)
T TIGR01517 406 VRD------VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFN 479 (941)
T ss_pred cCc------ccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccC
Confidence 110 11112344555666777777665433232344567899999999999998887776667778889999999
Q ss_pred CCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCC
Q 001638 557 SVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNH 636 (1039)
Q Consensus 557 s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~ 636 (1039)
|++|||+++++.++ +++++++|||||.++++|+++++.+|...++++ .++.+.+.+++|+++|+|++++|||+++.++
T Consensus 480 s~~k~msvv~~~~~-~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~ 557 (941)
T TIGR01517 480 SERKFMSVVVKHSG-GKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEE 557 (941)
T ss_pred CCCCeEEEEEEeCC-CcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccc
Confidence 99999999998766 678999999999999999998877888888887 7888999999999999999999999986543
Q ss_pred Cc-CCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHH
Q 001638 637 KA-ESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQ 715 (1039)
Q Consensus 637 ~~-~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~ 715 (1039)
.. .+..|+|++|+|+++++||+|||++++|+.|+++||+|+|+|||+..||.+||++|||.+++..+++|+++++++++
T Consensus 558 ~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~ 637 (941)
T TIGR01517 558 FPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYE 637 (941)
T ss_pred cccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHH
Confidence 22 22347899999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred HHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchH
Q 001638 716 EMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTT 795 (1039)
Q Consensus 716 ~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~ 795 (1039)
+++++++++.||||++|+||.++|+.||++ |++|+|||||+||+|||++||||||||++|+|+||++||++|+||||++
T Consensus 638 el~~~i~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~ 716 (941)
T TIGR01517 638 EMDPILPKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFAS 716 (941)
T ss_pred HHHHHhccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCC
Q 001638 796 IVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPI 875 (1039)
Q Consensus 796 i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~ 875 (1039)
|++++++||++|+||+|+++|++++|+..+++.+++.++++++|++++|+||+|+++|++|+++|++|+|++++|++||+
T Consensus 717 I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~ 796 (941)
T TIGR01517 717 IVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPI 796 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC-----CccchhhHHHHHHHHHHHHHHHHHhcccccccc
Q 001638 876 GRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGP-----NATLILNTFIFNSFVFCQVFNEINSRDMEKINV 950 (1039)
Q Consensus 876 ~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~-----~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~ 950 (1039)
+++++++++.||++++++++||+++.+++++.+..++...+. ......+|++|++|+++|+||.+|+|+....++
T Consensus 797 ~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~ 876 (941)
T TIGR01517 797 GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNV 876 (941)
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccc
Confidence 999999999999999999999998888777766555544331 123467899999999999999999998765588
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 951 FRGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 951 f~~~~~n~~f~~~~~~~~~~q~~~v~~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
|+++++|++|+.++++++++|++++++++.+|++.||++.+|++|++++++.+++.++.|++|.
T Consensus 877 ~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 877 FEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999985
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.5e-143 Score=1361.32 Aligned_cols=864 Identities=25% Similarity=0.403 Sum_probs=736.1
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCccc
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVY 198 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~ 198 (1039)
.++.+++.|+|+...||+++|+++|+++||+|+++.++++|+|..++++|.++++++|++++++|++++ .|+
T Consensus 11 ~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--------~~~ 82 (1053)
T TIGR01523 11 IADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--------DWI 82 (1053)
T ss_pred CHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------hHH
Confidence 678889999999989999999999999999999999999999999999999999999999999999876 689
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS 278 (1039)
Q Consensus 199 d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~ 278 (1039)
+++.|++.+++..+++.+++|+.++..++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||+|+++++
T Consensus 83 ~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~ 161 (1053)
T TIGR01523 83 EGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN 161 (1053)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc
Confidence 999999999999999999999999999999975 4568999999999999999999999999999999999999999999
Q ss_pred eeEeccCCCCCCCccccCC--------------CCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCC------
Q 001638 279 LTIDESSLSGETEPVHINR--------------DRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGE------ 338 (1039)
Q Consensus 279 l~VDES~LTGEs~pv~k~~--------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~------ 338 (1039)
|.||||+|||||.|+.|.. ..+++|+||.|.+|+++++|++||++|+.|||.+++.+...
T Consensus 162 L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~ 241 (1053)
T TIGR01523 162 FDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPE 241 (1053)
T ss_pred eEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccccc
Confidence 9999999999999999963 13679999999999999999999999999999998865321
Q ss_pred -----------------------------CCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh
Q 001638 339 -----------------------------DETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI 389 (1039)
Q Consensus 339 -----------------------------~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~ 389 (1039)
.+||||+++++++.++..+++++++++|++.... +
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------~--- 305 (1053)
T TIGR01523 242 KDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------V--- 305 (1053)
T ss_pred ccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------h---
Confidence 2599999999999998888777776665432100 0
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEE
Q 001638 390 DAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLW 469 (1039)
Q Consensus 390 ~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~ 469 (1039)
....+..+++++++++|||||+.++++++++++||+++|++||+++++|+||++|+||+|||||||+|+|+|+++|
T Consensus 306 ----~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~ 381 (1053)
T TIGR01523 306 ----DKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIW 381 (1053)
T ss_pred ----hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEE
Confidence 1245667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCc-ccccccC-----Cc------------------c---ccc-------------CCCCCHHHHHHHHHHHHhccCCc
Q 001638 470 ICNE-AKTIKSG-----DN------------------E---KLL-------------KPSVSDAVFNIFLQSIFQNTGSE 509 (1039)
Q Consensus 470 ~~~~-~~~~~~~-----~~------------------~---~~~-------------~~~~~~~~~~~l~~~~~~~~~~~ 509 (1039)
..+. .+..... .. . ... .....+.....++.....|+.+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~ 461 (1053)
T TIGR01523 382 IPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIAT 461 (1053)
T ss_pred EcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCe
Confidence 7641 1111100 00 0 000 00000112233444444555554
Q ss_pred eeec-CCCCccccCCchHHHHHHHHHHhCCCcc------cc-------------------cccccEEEEecCCCCCCceE
Q 001638 510 VVKD-KDGRTNILGTPTERAILEFGLILGGDST------FH-------------------REESAIVKVEPFNSVKKRMS 563 (1039)
Q Consensus 510 ~~~~-~~~~~~~~g~p~e~All~~a~~~g~~~~------~~-------------------~~~~~il~~~pF~s~rkrms 563 (1039)
...+ .++.+...|||+|.||+.++.+.|.+.. .. +.++++++.+||||+||||+
T Consensus 462 ~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~ms 541 (1053)
T TIGR01523 462 VFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMA 541 (1053)
T ss_pred eeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEE
Confidence 4322 2334456799999999999998887431 11 23578999999999999999
Q ss_pred EEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCC-ccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCC-----
Q 001638 564 VLVSLPNNGGFRVFCKGASEIILNMCDKIINADG-KAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHK----- 637 (1039)
Q Consensus 564 vvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~----- 637 (1039)
++++.++++.+++|+|||||.|+++|+++...+| +..+++++.++.+.+.+++|+++|+||+++|||+++..+.
T Consensus 542 vv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~ 621 (1053)
T TIGR01523 542 SIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQL 621 (1053)
T ss_pred EEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhh
Confidence 9998764245889999999999999998766555 5679999999999999999999999999999999865321
Q ss_pred -----cCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC----------CCc
Q 001638 638 -----AESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD----------GGL 702 (1039)
Q Consensus 638 -----~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~----------~~~ 702 (1039)
..+..|+|++|+|+++++||+|||++++|+.|+++||+|+|+|||+..||.+||++|||..+ ...
T Consensus 622 ~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~ 701 (1053)
T TIGR01523 622 KNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSM 701 (1053)
T ss_pred hccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccce
Confidence 11246889999999999999999999999999999999999999999999999999999754 357
Q ss_pred eeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHh
Q 001638 703 AIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKE 782 (1039)
Q Consensus 703 vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~ 782 (1039)
+++|.+++.++++++++.+.+..||||++|+||.++|+.+|+. |++|+|||||+||+|||++||||||||++|+++||+
T Consensus 702 vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~ 780 (1053)
T TIGR01523 702 VMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKD 780 (1053)
T ss_pred eeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C--CCchHHHHHHHHHHHhhHHHH
Q 001638 783 NADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACIT---G--SAPLTAVQLLWVNMIMDTLGA 857 (1039)
Q Consensus 783 ~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~---~--~~pl~~~qll~vnli~d~l~a 857 (1039)
+||++|+||||++|++++++||++|+||+|+++|+++.|+..+++.+++.++. | +.||+++|+||+|+++|.+|+
T Consensus 781 aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~pa 860 (1053)
T TIGR01523 781 ASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPA 860 (1053)
T ss_pred hcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888874 2 479999999999999999999
Q ss_pred hHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH---hccc--c--cccC---CC--CccchhhH
Q 001638 858 LALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTF---CGKK--I--LKLS---GP--NATLILNT 925 (1039)
Q Consensus 858 lala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~---~~~~--~--~~~~---~~--~~~~~~~T 925 (1039)
++|++|||++++|+|||+.++++++++.+|+.++.++++++++.+..++ ++.. . ..++ +. ......+|
T Consensus 861 laL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t 940 (1053)
T TIGR01523 861 MGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARS 940 (1053)
T ss_pred HhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHH
Confidence 9999999999999999999999999999999999889887765544332 1100 0 0000 00 11235689
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccc----------------ccchhHHHHHHHHHHHHHHHHH--Hhhhhh-hhcccC
Q 001638 926 FIFNSFVFCQVFNEINSRDMEKINVFR----------------GIFSSWVFIAVLVATVGFQVII--VELLGT-FATTVP 986 (1039)
Q Consensus 926 ~~f~~~v~~qv~n~~~~r~~~~~~~f~----------------~~~~n~~f~~~~~~~~~~q~~~--v~~~~~-~~~~~~ 986 (1039)
+.|.+++++|++|.+|+|+.+ .++|+ +.++|+++++++++++++|+++ +|+++. +|++.|
T Consensus 941 ~~f~~l~~~~~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~ 1019 (1053)
T TIGR01523 941 AAFATMTFCALILAVEVKDFD-NSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKP 1019 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhcCc-hhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCC
Confidence 999999999999999999874 23332 4679999888888888887654 567875 999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 987 LNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 987 l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
+++ +|+++++++++.+++.++.|++..
T Consensus 1020 l~~-~w~~~~~~~~~~~~~~e~~K~~~r 1046 (1053)
T TIGR01523 1020 IGA-EWGLAAAATIAFFFGAEIWKCGKR 1046 (1053)
T ss_pred cch-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997 899999999999999999998864
No 5
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=3.5e-141 Score=1333.87 Aligned_cols=846 Identities=32% Similarity=0.515 Sum_probs=745.7
Q ss_pred CHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCccCCCCCCcHHHHHHHHH-hhHHHHHHHHHHHHHhhccCCCCCCCCc
Q 001638 119 GVEGLAREVSVSLPDGVA-SEEVSNRQNVYGFNRYAEKPARSFWMFVWEAL-HDLTLIILMICAAVSIGVGIPTEGWPDG 196 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~-~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~-~~~~~~il~v~a~ls~~~~~~~~~~~~~ 196 (1039)
.++++++.|++|..+||+ ++|+++|+++||.|+++.++++++|++++++| +++++++|++++++|++++ .
T Consensus 8 ~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--------~ 79 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--------N 79 (884)
T ss_pred CHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc--------c
Confidence 788999999999999999 88999999999999999999999999999999 9999999999999999886 5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEee
Q 001638 197 VYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISG 276 (1039)
Q Consensus 197 ~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g 276 (1039)
|.+++.|++++++++.++.+++|+.++..+++.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|
T Consensus 80 ~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g 158 (884)
T TIGR01522 80 IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEA 158 (884)
T ss_pred hhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEc
Confidence 88899998888888999999999999999998874 45689999999999999999999999999999999999999999
Q ss_pred CceeEeccCCCCCCCccccCCC-------------CceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCch
Q 001638 277 YSLTIDESSLSGETEPVHINRD-------------RPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPL 343 (1039)
Q Consensus 277 ~~l~VDES~LTGEs~pv~k~~~-------------~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tpl 343 (1039)
+++.||||+|||||.|+.|..+ ++++|+||.|.+|+++++|++||.+|++|++.+++++...+++|+
T Consensus 159 ~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~l 238 (884)
T TIGR01522 159 VDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPL 238 (884)
T ss_pred CceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcH
Confidence 8889999999999999999754 258999999999999999999999999999999999888889999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHH
Q 001638 344 QVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAF 423 (1039)
Q Consensus 344 q~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~ 423 (1039)
|+.+++++.++..++++++++++++. ++.+ ..+...+..++++++++||||||+++|+++++
T Consensus 239 q~~l~~l~~~~~~~~~~~~~~~~~~~---~~~~---------------~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~ 300 (884)
T TIGR01522 239 QKSMDLLGKQLSLVSFGVIGVICLVG---WFQG---------------KDWLEMFTISVSLAVAAIPEGLPIIVTVTLAL 300 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHhc---------------CCHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 99999999998877665544433321 2110 12346788899999999999999999999999
Q ss_pred HHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccc-ccc---CCcc------cccCCCCCHH
Q 001638 424 AMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKT-IKS---GDNE------KLLKPSVSDA 493 (1039)
Q Consensus 424 ~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~-~~~---~~~~------~~~~~~~~~~ 493 (1039)
++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+. ... .... .......++.
T Consensus 301 ~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (884)
T TIGR01522 301 GVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVA 380 (884)
T ss_pred HHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHH
Confidence 99999999999999999999999999999999999999999999987654211 000 0000 0000111223
Q ss_pred HHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCe
Q 001638 494 VFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGG 573 (1039)
Q Consensus 494 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~ 573 (1039)
..+++..+ +.|+++.... . .....|||+|.|+++++.+.|.+ ..+..++.++.+||+|+||||+++++...+++
T Consensus 381 ~~~~l~~~-~l~~~~~~~~-~--~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~ 454 (884)
T TIGR01522 381 VSRILEAG-NLCNNAKFRN-E--ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQDRS 454 (884)
T ss_pred HHHHHHHH-hhhCCCeecC-C--CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCe
Confidence 33344333 3344333211 1 12456899999999999887653 34456889999999999999999988654378
Q ss_pred EEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeec
Q 001638 574 FRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVG 653 (1039)
Q Consensus 574 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~ 653 (1039)
+++++|||||.|+.+|++++..+|...+++++.++++.+.+++|+++|+|++++||+++ +.+++|+|+++
T Consensus 455 ~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------~~~l~~lGli~ 524 (884)
T TIGR01522 455 EMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------KGQLTFLGLVG 524 (884)
T ss_pred EEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------CCCeEEEEEEe
Confidence 89999999999999999998878888899999999999999999999999999999875 35799999999
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh
Q 001638 654 IKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
++||+|||++++|+.|+++||+++|+|||+..||.++|+++||......+++|++++.++++++++.+++..||||++|+
T Consensus 525 l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 525 INDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred ccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 99999999999999999999999999999999999999999999877889999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHH
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKF 813 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~ 813 (1039)
||.++|+.+|+. |++|+|||||+||+|||++||||||||.+|+++++++||++++||||++|++++++||++|+||+|+
T Consensus 605 ~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~ 683 (884)
T TIGR01522 605 HKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNF 683 (884)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHH
Q 001638 814 VQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQ 893 (1039)
Q Consensus 814 i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~ 893 (1039)
++|+++.|+..+.+.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|+|||++++++++++.||++++.+
T Consensus 684 i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~ 763 (884)
T TIGR01522 684 ITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVS 763 (884)
T ss_pred HHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHH
Confidence 99999999999999888899889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHHHHHhcccccccccc-ccchhHHHHHHHHHHHHHHH
Q 001638 894 SIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFR-GIFSSWVFIAVLVATVGFQV 972 (1039)
Q Consensus 894 ~i~q~~v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~-~~~~n~~f~~~~~~~~~~q~ 972 (1039)
+++++++.+++++.. +.. + .....++|++|++|++||+||.+|+|+. +.++|+ ++++|++|++++++++++|+
T Consensus 764 g~~~~~~~~~~~~~~--~~~--~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~ 837 (884)
T TIGR01522 764 AIIIVVGTLFVFVRE--MQD--G-VITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIGFFSNRMFNYAVGGSIIGQL 837 (884)
T ss_pred HHHHHHHHHHHHHHH--HcC--C-cchhhHHHHHHHHHHHHHHHHHHHHccC-CccccccCcccCHHHHHHHHHHHHHHH
Confidence 999887765544321 111 1 1223568999999999999999999995 568887 78999999999999999998
Q ss_pred HHH--hhhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 973 IIV--ELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 973 ~~v--~~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
+++ ++++.+|++.||++.+|++|++++++.+++.++.|++..
T Consensus 838 ~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 838 LVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVER 881 (884)
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 776 578999999999999999999999999999999998764
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.4e-140 Score=1338.89 Aligned_cols=874 Identities=26% Similarity=0.393 Sum_probs=736.9
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCC-----CC
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTE-----GW 193 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~-----~~ 193 (1039)
.++++.+.|+|+..+||+++|+++|+++||+|+++.++++++|+.++++|.++++++|++++++++++..... +.
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~ 100 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQ 100 (997)
T ss_pred CHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 6788899999999999999999999999999999999999999999999999999999999999876532211 11
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEE
Q 001638 194 PDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGIL 273 (1039)
Q Consensus 194 ~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 273 (1039)
...|++++.+++.+++..+++.+++++.++..+++.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 101 ~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~-~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~i 179 (997)
T TIGR01106 101 NDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNM-VPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRI 179 (997)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEE
Confidence 24688888766666666666666666666666666653 45689999999999999999999999999999999999999
Q ss_pred EeeCceeEeccCCCCCCCccccCCCC---------ceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchH
Q 001638 274 ISGYSLTIDESSLSGETEPVHINRDR---------PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQ 344 (1039)
Q Consensus 274 l~g~~l~VDES~LTGEs~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq 344 (1039)
++|++|.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|+.|++.+.+.+.+.+++|+|
T Consensus 180 l~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~ 259 (997)
T TIGR01106 180 ISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIA 259 (997)
T ss_pred EEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcHH
Confidence 99998999999999999999997543 479999999999999999999999999999999988788899999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHH
Q 001638 345 VKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFA 424 (1039)
Q Consensus 345 ~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~ 424 (1039)
+++++++..+..+++++++++++++.. .+ ..+...+..++++++++||||||++++++++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------------~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~ 321 (997)
T TIGR01106 260 IEIEHFIHIITGVAVFLGVSFFILSLI---LG---------------YTWLEAVIFLIGIIVANVPEGLLATVTVCLTLT 321 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---hc---------------CCHHHHHHHHHHHHhhcCCccchHHHHHHHHHH
Confidence 999999999988887777666554321 11 122356777899999999999999999999999
Q ss_pred HHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHh
Q 001638 425 MKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQ 504 (1039)
Q Consensus 425 ~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 504 (1039)
+++|+++|++||+++++|+||++|+||||||||||+|+|+|.++|+++..+....................+.+...++.
T Consensus 322 ~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~al 401 (997)
T TIGR01106 322 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGL 401 (997)
T ss_pred HHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987765432111000000000111233344555566
Q ss_pred ccCCceeecCCC----CccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcC--CCCeEEEEE
Q 001638 505 NTGSEVVKDKDG----RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLP--NNGGFRVFC 578 (1039)
Q Consensus 505 ~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~--~~~~~~~~~ 578 (1039)
|+++....+.++ ..+..|||+|.||++++.+.+.+....++.+++++.+||||+||||+++++.. +++.+++|+
T Consensus 402 cn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~ 481 (997)
T TIGR01106 402 CNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVM 481 (997)
T ss_pred cCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEE
Confidence 665544322222 23567999999999999877766667778899999999999999999988643 225688999
Q ss_pred eCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc---------CCCCCCCcEee
Q 001638 579 KGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA---------ESIPENNYTLI 649 (1039)
Q Consensus 579 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~---------~~~~e~~l~~l 649 (1039)
|||||.|+++|++++ .+|+..+++++.++.+.+.+++|+++|+||+++|||+++.++.. .+..|+|++|+
T Consensus 482 KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~fl 560 (997)
T TIGR01106 482 KGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFV 560 (997)
T ss_pred eCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEE
Confidence 999999999999886 57888999999999999999999999999999999998643211 11238899999
Q ss_pred eeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC------------------------Cceee
Q 001638 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG------------------------GLAIE 705 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~------------------------~~vi~ 705 (1039)
|+++++||+|||++++|++|+++||+|+|+|||+..||.++|+++||..++ ..+++
T Consensus 561 Gli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~ 640 (997)
T TIGR01106 561 GLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVH 640 (997)
T ss_pred EEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEE
Confidence 999999999999999999999999999999999999999999999997542 26999
Q ss_pred CcccccCCHHHHHhhcccce--EEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhc
Q 001638 706 GTDFRSKNPQEMQELIPKLQ--VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKEN 783 (1039)
Q Consensus 706 G~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~ 783 (1039)
|.+++.++++++++.++++. ||||++|+||.++|+.+|+. |++|+|+|||+||+|||++||||||||++|+|+||++
T Consensus 641 G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~a 719 (997)
T TIGR01106 641 GSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA 719 (997)
T ss_pred hHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHh
Confidence 99999999999999998764 99999999999999999998 9999999999999999999999999998999999999
Q ss_pred cCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccC
Q 001638 784 ADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATE 863 (1039)
Q Consensus 784 aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e 863 (1039)
||++|+||||++|+++++|||++|+||+|+++|+++.|+..+++.++++++..++||+++|+||+|+++|++|+++|++|
T Consensus 720 ADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e 799 (997)
T TIGR01106 720 ADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYE 799 (997)
T ss_pred hceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCC-CCCcchHHHHHHHH-HHHHHHHHHHHHHHHhcc--------ccccc---------CC---CC---
Q 001638 864 PPHEGLMQRPPIGR-NVHFITVTMWRNII-GQSIYQIIVLGVLTFCGK--------KILKL---------SG---PN--- 918 (1039)
Q Consensus 864 ~p~~~lm~~~P~~~-~~~li~~~~~~~i~-~~~i~q~~v~~~l~~~~~--------~~~~~---------~~---~~--- 918 (1039)
||++++|+|||+.+ .++++++.+|..++ ..+++|+++.++.++... .++.+ ++ ..
T Consensus 800 ~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (997)
T TIGR01106 800 KAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQE 879 (997)
T ss_pred CCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccc
Confidence 99999999999984 78999998876543 345566554443332211 11111 00 00
Q ss_pred --------ccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHH--HhhhhhhhcccCCC
Q 001638 919 --------ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVII--VELLGTFATTVPLN 988 (1039)
Q Consensus 919 --------~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~--v~~~~~~~~~~~l~ 988 (1039)
.....+|++|++++++|+||.+|||+. +.++|+..++|++++.++++.+++++++ +++++.+|++.|++
T Consensus 880 ~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~ 958 (997)
T TIGR01106 880 WTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR-RNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLK 958 (997)
T ss_pred cchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC-cccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCC
Confidence 001468999999999999999999995 6688875589999988888877777554 56789999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 989 WKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 989 ~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
+.+|+++++++++.+++.++.|++..
T Consensus 959 ~~~w~~~~~~~~~~~~~~~~~k~~~r 984 (997)
T TIGR01106 959 PTWWFCAFPYSLLIFVYDEIRKLIIR 984 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998774
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-138 Score=1300.07 Aligned_cols=842 Identities=36% Similarity=0.532 Sum_probs=735.8
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchh
Q 001638 122 GLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGL 201 (1039)
Q Consensus 122 ~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~ 201 (1039)
.+...+.++...||+.+|+.+|++.||+|++++.+.+++|..++.+|.++++++|++++++|+.++....+. .+..
T Consensus 32 ~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~~~ 107 (917)
T COG0474 32 ELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VDAI 107 (917)
T ss_pred hHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----ccee
Confidence 456677888899999999999999999999999999999999999999999999999999999987422110 4555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeE
Q 001638 202 GIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTI 281 (1039)
Q Consensus 202 ~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~V 281 (1039)
.|+..+++..++..+++|+.++..+++.+.. +.+++|+|||++++|+++||||||||.|++||+||||++++++++++|
T Consensus 108 ~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~V 186 (917)
T COG0474 108 VILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEV 186 (917)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCceE
Confidence 6777777888888999999999998888755 679999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCccccC-------------CCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHh
Q 001638 282 DESSLSGETEPVHIN-------------RDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLN 348 (1039)
Q Consensus 282 DES~LTGEs~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~ 348 (1039)
|||+|||||.|+.|. ..++++|+||.|.+|++.++|++||.+|+.|++...+......+||+|++++
T Consensus 187 dEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~ 266 (917)
T COG0474 187 DESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLN 266 (917)
T ss_pred EcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHH
Confidence 999999999999996 4478999999999999999999999999999999999987688999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHh
Q 001638 349 GVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKL 428 (1039)
Q Consensus 349 ~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m 428 (1039)
++...+..++++.++++|++.. +.+ ...+...|..++++++.++|+|||+.++++++.++.+|
T Consensus 267 ~~~~~l~~~~l~~~~~~~~~~~---~~~--------------~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~m 329 (917)
T COG0474 267 KLGKFLLVLALVLGALVFVVGL---FRG--------------GNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRM 329 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---Hhc--------------CccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 9999999988888777776541 110 01145788999999999999999999999999999999
Q ss_pred hccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCC
Q 001638 429 MNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGS 508 (1039)
Q Consensus 429 ~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 508 (1039)
.+++++||+++++|+||++++||||||||||+|+|+|++++..+...+. + ......++... .++..+++|++.
T Consensus 330 ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~---~---~~~~~~~~~~~-~~l~~~~lc~~~ 402 (917)
T COG0474 330 AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDI---D---DKDLKDSPALL-RFLLAAALCNSV 402 (917)
T ss_pred HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccc---c---ccccccchHHH-HHHHHHHhcCcc
Confidence 9999999999999999999999999999999999999999998511100 1 00111122222 334445566665
Q ss_pred ceeecCCCCccccCCchHHHHHHHHHHhCC--CcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHH
Q 001638 509 EVVKDKDGRTNILGTPTERAILEFGLILGG--DSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIIL 586 (1039)
Q Consensus 509 ~~~~~~~~~~~~~g~p~e~All~~a~~~g~--~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il 586 (1039)
....+ + ++..|||+|.||++++.+.|. +....+.++++++.+||||+||||+++++..+ +++.+++|||||.|+
T Consensus 403 ~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~-~~~~~~~KGApe~il 478 (917)
T COG0474 403 TPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDE-GKYILFVKGAPEVIL 478 (917)
T ss_pred ccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCC-CcEEEEEcCChHHHH
Confidence 54433 3 788999999999999999998 77777888899999999999999999999665 669999999999999
Q ss_pred hhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcC--CCCCCCcEeeeeecccCCCCccHHH
Q 001638 587 NMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAE--SIPENNYTLIAVVGIKDPVRPGVRE 664 (1039)
Q Consensus 587 ~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~--~~~e~~l~~lG~v~i~D~lR~~v~~ 664 (1039)
++|++. |...+++++.++.+.+..++|+++|||++++|||.++..+... +..|+|++|+|+++|+||||+|+++
T Consensus 479 ~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~ 554 (917)
T COG0474 479 ERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKE 554 (917)
T ss_pred HHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHH
Confidence 999986 6778899999999999999999999999999999776554321 4689999999999999999999999
Q ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHH
Q 001638 665 AVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQL 742 (1039)
Q Consensus 665 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l 742 (1039)
+|+.|++|||+|||+||||+.||++||++|||..+.. .+++|.+++.++++|+.+.+.++.||||+||+||.++|+.|
T Consensus 555 aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~l 634 (917)
T COG0474 555 AIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEAL 634 (917)
T ss_pred HHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999998774 59999999999999999999999999999999999999999
Q ss_pred hhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 001638 743 RNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNI 822 (1039)
Q Consensus 743 ~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni 822 (1039)
|+. |++|+|||||+||+||||+||||||||++|+|+||++||++++||||.+|+.+++|||++|.||+|+++|.++.|+
T Consensus 635 q~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~ 713 (917)
T COG0474 635 QKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNV 713 (917)
T ss_pred HhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCC-CchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 001638 823 VALVINFVAACITGS-APLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVL 901 (1039)
Q Consensus 823 ~~i~~~~~~~~~~~~-~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~ 901 (1039)
..+++.+++.+++.+ .|++++|+||+|+++|++|+++|+.++|+.+.|++||++++++++++..+..++.+..++.+++
T Consensus 714 ~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~ 793 (917)
T COG0474 714 GEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAIL 793 (917)
T ss_pred HHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHH
Confidence 999999999888877 9999999999999999999999999999999999999999999999988888777777777776
Q ss_pred HHHHHhcccccccCC---CC-ccchhhHHHHHHHHHHHHHHHHHhcccccccccc-ccchhHHHHHHHHHHHHHHHHHH-
Q 001638 902 GVLTFCGKKILKLSG---PN-ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFR-GIFSSWVFIAVLVATVGFQVIIV- 975 (1039)
Q Consensus 902 ~~l~~~~~~~~~~~~---~~-~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~-~~~~n~~f~~~~~~~~~~q~~~v- 975 (1039)
.++.|....+..... .. ......|+.|++++++|.++.+++|.. +.++|. +++.|+.++++++++++++++++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~ 872 (917)
T COG0474 794 FILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWLALLVIIILQLLIIF 872 (917)
T ss_pred HHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 665554433222111 11 145678999999999999999999986 345555 46799999999998888887765
Q ss_pred -hhhh-hhhcccCCChHHHHHHHHHHHHH
Q 001638 976 -ELLG-TFATTVPLNWKLWLASVVIGAIS 1002 (1039)
Q Consensus 976 -~~~~-~~~~~~~l~~~~w~~~i~~~~~~ 1002 (1039)
++.. ..|++.|+++.+|++++......
T Consensus 873 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 901 (917)
T COG0474 873 LPPLNLKIFQPTPLSLFEWLIAIAVALLL 901 (917)
T ss_pred hHHhHhhhccCCCCcHHHHHHHHHHHHHH
Confidence 3445 68899999999999988887444
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=4.6e-135 Score=1271.34 Aligned_cols=829 Identities=23% Similarity=0.348 Sum_probs=702.4
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCC---CCCCC
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPT---EGWPD 195 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~---~~~~~ 195 (1039)
..+.+.+.|+++ .+||+++|+++|+++||+|+++.++++++|..++++|+++++++|++++++|++++... .+...
T Consensus 31 ~~~~v~~~l~~~-~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~ 109 (903)
T PRK15122 31 SLEETLANLNTH-RQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEET 109 (903)
T ss_pred CHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 567778888998 47999999999999999999999999999999999999999999999999999886532 12224
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeC------CeEEEEEcCCcccCcEEEEcCCCcccc
Q 001638 196 GVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRD------GYRKKLSIYDLVVGDIVHLSIGDQVPA 269 (1039)
Q Consensus 196 ~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~------G~~~~I~~~dLvvGDIV~l~~Gd~VPa 269 (1039)
.|.+++.|++.+++..+++.+++|+.++..++|.+.. +..++|+|| |++++|+++||||||+|.|++||+|||
T Consensus 110 ~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPa 188 (903)
T PRK15122 110 DLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPA 188 (903)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEee
Confidence 6899999999899999999999999999999998754 467999999 489999999999999999999999999
Q ss_pred cEEEEeeCceeEeccCCCCCCCccccCC----------------------CCceeecccEEeeCCeEEEEEEeccchhhH
Q 001638 270 DGILISGYSLTIDESSLSGETEPVHINR----------------------DRPFLLSGTKVQDGSGKMLVTSVGMRTEWG 327 (1039)
Q Consensus 270 Dgill~g~~l~VDES~LTGEs~pv~k~~----------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g 327 (1039)
||++++|++|.||||+|||||.|+.|.. .++++|+||.|.+|+++++|++||.+|++|
T Consensus 189 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~g 268 (903)
T PRK15122 189 DVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFG 268 (903)
T ss_pred eEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhh
Confidence 9999999999999999999999999974 136899999999999999999999999999
Q ss_pred HHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHh
Q 001638 328 RLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVV 407 (1039)
Q Consensus 328 ki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvv 407 (1039)
+|.+++.+ ...++|+|++++++++.+..+++.++.+++++.. +. ...+...+..+++++++
T Consensus 269 kI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~---------------~~~~~~~l~~aisl~V~ 329 (903)
T PRK15122 269 SLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT---------------KGDWLEALLFALAVAVG 329 (903)
T ss_pred HHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc---------------cCCHHHHHHHHHHHHHH
Confidence 99999887 6678999999999999888877665554443321 11 01234677889999999
Q ss_pred hhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccC
Q 001638 408 AVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLK 487 (1039)
Q Consensus 408 avP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~ 487 (1039)
+||||||++++++++.++.+|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. .
T Consensus 330 ~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-------~----- 397 (903)
T PRK15122 330 LTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-------K----- 397 (903)
T ss_pred HccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-------C-----
Confidence 9999999999999999999999999999999999999999999999999999999999997642211 0
Q ss_pred CCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEE
Q 001638 488 PSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVS 567 (1039)
Q Consensus 488 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~ 567 (1039)
.++.+ .. .+.|+.. ....|||+|.|+++++.+.+.+ ..+..++.++.+||+|.+|+|+++++
T Consensus 398 ---~~~~l---~~-a~l~s~~---------~~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~ 459 (903)
T PRK15122 398 ---DERVL---QL-AWLNSFH---------QSGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVVVE 459 (903)
T ss_pred ---hHHHH---HH-HHHhCCC---------CCCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEEEE
Confidence 11222 21 2223211 0125899999999999876643 23456788999999999999999998
Q ss_pred cCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc---CCCCCC
Q 001638 568 LPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA---ESIPEN 644 (1039)
Q Consensus 568 ~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~---~~~~e~ 644 (1039)
..+ +++++++|||||.++++|+++.. +|...+++++.++++.+.+++++++|+|++++|||+++.++.. .+..|+
T Consensus 460 ~~~-~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~ 537 (903)
T PRK15122 460 DAQ-GQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADER 537 (903)
T ss_pred cCC-CcEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccccccccccc
Confidence 765 77889999999999999998764 6777899999999999999999999999999999988654311 123578
Q ss_pred CcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccc
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKL 724 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~ 724 (1039)
|++|+|+++++||+|||++++|++|+++||+|+|+||||+.||.+||+++||.. +.+++|.+++.++++|+.+.++++
T Consensus 538 ~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~ 615 (903)
T PRK15122 538 DLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEER 615 (903)
T ss_pred CcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhC
Confidence 999999999999999999999999999999999999999999999999999953 468999999999999999999999
Q ss_pred eEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhH
Q 001638 725 QVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGR 804 (1039)
Q Consensus 725 ~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR 804 (1039)
.||||++|+||.++|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|+.++++||
T Consensus 616 ~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR 693 (903)
T PRK15122 616 TVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGR 693 (903)
T ss_pred CEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchH
Q 001638 805 SVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITV 884 (1039)
Q Consensus 805 ~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~ 884 (1039)
++|+||+|+++|+++.|+..++..+++.++..+.|++|+|+||+|++||+ |+++|++|||++++| |||++++++++++
T Consensus 694 ~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~ 771 (903)
T PRK15122 694 ETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGR 771 (903)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHH
Confidence 99999999999999999999888888777777799999999999999995 999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHH
Q 001638 885 TMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVL 964 (1039)
Q Consensus 885 ~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~ 964 (1039)
.|+..-+..+++.+..+++ .++ .+...........+|..|.+++++|+||.+|+|+.+ .++| +|+..+..+
T Consensus 772 ~~~~~g~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~-~~~~----~~~~~~~~~ 842 (903)
T PRK15122 772 FMLWIGPTSSIFDITTFAL-MWF---VFAANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQK-IPFI----QSTAALPVL 842 (903)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHH---HhccCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCC-CCcC----cchHHHHHH
Confidence 8886333333332222222 111 111110011113457889999999999999999863 2444 455544455
Q ss_pred HHHHHHHHH--HHhh--hhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccC
Q 001638 965 VATVGFQVI--IVEL--LGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVG 1015 (1039)
Q Consensus 965 ~~~~~~q~~--~v~~--~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~ 1015 (1039)
++++++|++ ++++ ++.+|++.|+++.+|+++++++++.+++.++.|.+-.+
T Consensus 843 ~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r 897 (903)
T PRK15122 843 LTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIR 897 (903)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 555555544 3555 78999999999999999999999999999898865444
No 9
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.2e-134 Score=1273.18 Aligned_cols=836 Identities=32% Similarity=0.482 Sum_probs=717.5
Q ss_pred HHHHHhhHHHHHHHHHHHHHhhccCCCCCC--CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEe
Q 001638 164 VWEALHDLTLIILMICAAVSIGVGIPTEGW--PDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTR 241 (1039)
Q Consensus 164 ~~~~~~~~~~~il~v~a~ls~~~~~~~~~~--~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR 241 (1039)
++++|+++++++|++++++|++++...++. ...|++++.|++.+++...++.+++++.++..+++.+. .+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~-~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEY-ESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEE
Confidence 478999999999999999999998765332 24799999999999999999999999999999999874 566899999
Q ss_pred CCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCC------------CceeecccEEe
Q 001638 242 DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD------------RPFLLSGTKVQ 309 (1039)
Q Consensus 242 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~------------~~~l~sGt~v~ 309 (1039)
||++++|+++||||||+|.|++||+|||||++++|++|.||||+|||||.|+.|..+ ++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999643 37899999999
Q ss_pred eCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh
Q 001638 310 DGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI 389 (1039)
Q Consensus 310 ~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~ 389 (1039)
+|+++++|++||.+|+.||+.+++.+.+.++||+|+++++++..+..+.+++++++|+++...+.. ......|.
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~-- 233 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFND----PALGGGWI-- 233 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----ccccchhH--
Confidence 999999999999999999999999988888999999999999999888777776666544322110 00001221
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEE
Q 001638 390 DAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLW 469 (1039)
Q Consensus 390 ~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~ 469 (1039)
..+..++..++++++++||||||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 234 --~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 234 --QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred --HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 234566778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCccc------ccccC---CcccccC-----CCCCHHHHHHHHHHHHhccCCceeecC-CCCccccCCchHHHHHHHHH
Q 001638 470 ICNEAK------TIKSG---DNEKLLK-----PSVSDAVFNIFLQSIFQNTGSEVVKDK-DGRTNILGTPTERAILEFGL 534 (1039)
Q Consensus 470 ~~~~~~------~~~~~---~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~g~p~e~All~~a~ 534 (1039)
..+... +.... +...... ....+...+.+......|+++....++ ++.....|||+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 865321 00000 0000000 001122344455555666665543322 22334579999999999999
Q ss_pred HhCCCccc----------------ccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCc
Q 001638 535 ILGGDSTF----------------HREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGK 598 (1039)
Q Consensus 535 ~~g~~~~~----------------~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~ 598 (1039)
+.|.+... .++.+++++.+||||+||||+++++.+ +++++|+|||||.|+++|++++..+|.
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~--~~~~~~~KGApe~il~~c~~~~~~~g~ 469 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS--TGNKLFVKGAPEGVLERCTHILNGDGR 469 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC--CcEEEEEcCChHHHHHhccceecCCCC
Confidence 98876543 245678999999999999999999864 568899999999999999998887788
Q ss_pred cccCCHHHHHHHHHHHHHHhH-ccCcEEEEEEEecCCCCC--------cCCCCCCCcEeeeeecccCCCCccHHHHHHHH
Q 001638 599 AVPISEEQRKNLTNVINGFSS-EALRTLCLAFQDIKGNHK--------AESIPENNYTLIAVVGIKDPVRPGVREAVETC 669 (1039)
Q Consensus 599 ~~~l~~~~~~~~~~~i~~~a~-~glr~l~~A~k~l~~~~~--------~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l 669 (1039)
..|++++.++++.+.+++|++ +|+||+++|||+++.+.. ..+..|+|++|+|+++++||+||+++++|+.|
T Consensus 470 ~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l 549 (917)
T TIGR01116 470 AVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKC 549 (917)
T ss_pred eeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHH
Confidence 899999999999999999999 999999999999865321 11345889999999999999999999999999
Q ss_pred HHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC----ceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhc
Q 001638 670 LAAGITVRMVTGDNIHTAKAIAKECGILTDGG----LAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNV 745 (1039)
Q Consensus 670 ~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~----~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~ 745 (1039)
+++||+++|+|||+..||.++|+++||..++. .+++|++++.+.++++.+...+..||||++|+||.++|+.+|+.
T Consensus 550 ~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~ 629 (917)
T TIGR01116 550 RTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ 629 (917)
T ss_pred HHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999986543 57899999999999999999999999999999999999999988
Q ss_pred CCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 001638 746 FKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVAL 825 (1039)
Q Consensus 746 ~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i 825 (1039)
|++|+|+|||.||+|||++|||||||| +|++++|++||+++.||||++|+++++|||++|+||+|+++|+++.|+..+
T Consensus 630 -g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~ 707 (917)
T TIGR01116 630 -GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEV 707 (917)
T ss_pred -CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 001638 826 VINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLT 905 (1039)
Q Consensus 826 ~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~ 905 (1039)
++.+++.++..+.||+++|++|+|+++|++|+++|+.|||++++|++||+.++++++++.+|+.++.++++|+++.++.+
T Consensus 708 ~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~ 787 (917)
T TIGR01116 708 VCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGF 787 (917)
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888899999999999999999999999999999999999999999999999999999999999987743333
Q ss_pred Hhccc---ccc--------cC---CC-----CccchhhHHHHHHHHHHHHHHHHHhcccccccccc-ccchhHHHHHHHH
Q 001638 906 FCGKK---ILK--------LS---GP-----NATLILNTFIFNSFVFCQVFNEINSRDMEKINVFR-GIFSSWVFIAVLV 965 (1039)
Q Consensus 906 ~~~~~---~~~--------~~---~~-----~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~-~~~~n~~f~~~~~ 965 (1039)
++... +.. ++ +. ......+|++|++|+++|+||.+|+|+. +.++|+ ++++|++|+++++
T Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~ 866 (917)
T TIGR01116 788 VWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWVNKWLIGAIC 866 (917)
T ss_pred HHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCccCHHHHHHHH
Confidence 22111 111 01 00 0124568999999999999999999996 567776 7889999999999
Q ss_pred HHHHHHHHH--HhhhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhc
Q 001638 966 ATVGFQVII--VELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIP 1013 (1039)
Q Consensus 966 ~~~~~q~~~--v~~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~ 1013 (1039)
+++++|+++ +++++.+|++.|+++.+|+++++++++.++++++.|++.
T Consensus 867 ~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 867 LSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999887 788999999999999999999999999999999999874
No 10
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2e-133 Score=1254.39 Aligned_cols=819 Identities=24% Similarity=0.360 Sum_probs=686.6
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCccc
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVY 198 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~ 198 (1039)
..+.+.+.|+++. +||+++|+++|+++||+|+++.++++++|+.++++|+++++++|++++++|++++ .|+
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~~~ 123 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------DLF 123 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------cHH
Confidence 5777888899986 6999999999999999999999999999999999999999999999999999875 688
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeC------CeEEEEEcCCcccCcEEEEcCCCcccccEE
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRD------GYRKKLSIYDLVVGDIVHLSIGDQVPADGI 272 (1039)
Q Consensus 199 d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~------G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgi 272 (1039)
+++.|++.+++..+++.+++++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+|||||+
T Consensus 124 ~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~ 202 (902)
T PRK10517 124 AAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLR 202 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEE
Confidence 8888888888888899999999999998888754 458999999 789999999999999999999999999999
Q ss_pred EEeeCceeEeccCCCCCCCccccCCCC------------ceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCC
Q 001638 273 LISGYSLTIDESSLSGETEPVHINRDR------------PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDE 340 (1039)
Q Consensus 273 ll~g~~l~VDES~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~ 340 (1039)
+++|++|.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|++|+|.+++.+...++
T Consensus 203 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~ 282 (902)
T PRK10517 203 ILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEP 282 (902)
T ss_pred EEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCC
Confidence 999999999999999999999997543 57999999999999999999999999999999999888899
Q ss_pred CchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHH
Q 001638 341 TPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420 (1039)
Q Consensus 341 tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~ 420 (1039)
+|+|+.++++++++..++++++.+++++.. +.. ..+...+..++++++++||||||++++++
T Consensus 283 t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~~---------------~~~~~~l~~alsv~V~~~Pe~LP~~vt~~ 344 (902)
T PRK10517 283 NAFQQGISRVSWLLIRFMLVMAPVVLLING---YTK---------------GDWWEAALFALSVAVGLTPEMLPMIVTST 344 (902)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---Hhc---------------CCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 999999999999988887776665554421 110 12346778899999999999999999999
Q ss_pred HHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHH
Q 001638 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQ 500 (1039)
Q Consensus 421 la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 500 (1039)
++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..... . .++. +.
T Consensus 345 la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~-------~--------~~~l----l~ 405 (902)
T PRK10517 345 LARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK-------T--------SERV----LH 405 (902)
T ss_pred HHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC-------C--------HHHH----HH
Confidence 999999999999999999999999999999999999999999999986421100 0 1112 22
Q ss_pred HHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeC
Q 001638 501 SIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKG 580 (1039)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KG 580 (1039)
..+.|+... ...|||+|.|+++++...+ .......++.++.+||||++|||+++++..+ +.+++++||
T Consensus 406 ~a~l~~~~~---------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~-~~~~~~~KG 473 (902)
T PRK10517 406 SAWLNSHYQ---------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENT-EHHQLICKG 473 (902)
T ss_pred HHHhcCCcC---------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECC-CeEEEEEeC
Confidence 233333211 1258999999999886533 1223456788999999999999999988665 678899999
Q ss_pred cHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCC-CCCCCcEeeeeecccCCCC
Q 001638 581 ASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAES-IPENNYTLIAVVGIKDPVR 659 (1039)
Q Consensus 581 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~-~~e~~l~~lG~v~i~D~lR 659 (1039)
|||.++++|+++.. +|...+++++.++.+.+.+++++++|+|++++|||+++..+.+.+ ..|+|++|+|+++|+||+|
T Consensus 474 a~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R 552 (902)
T PRK10517 474 ALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPK 552 (902)
T ss_pred chHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcch
Confidence 99999999998754 566789999999999999999999999999999998865432211 2478999999999999999
Q ss_pred ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHH
Q 001638 660 PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILV 739 (1039)
Q Consensus 660 ~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V 739 (1039)
||++++|++|+++||+|+|+||||+.||.+||+++||. ++.+++|.+++.++++|+++.++++.||||++|+||.++|
T Consensus 553 ~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV 630 (902)
T PRK10517 553 ETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIV 630 (902)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHH
Confidence 99999999999999999999999999999999999995 3579999999999999999999999999999999999999
Q ss_pred HHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Q 001638 740 TQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLT 819 (1039)
Q Consensus 740 ~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~ 819 (1039)
+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++||++|+||+|+++|+++
T Consensus 631 ~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls 708 (902)
T PRK10517 631 TLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTAS 708 (902)
T ss_pred HHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 001638 820 VNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQII 899 (1039)
Q Consensus 820 ~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~ 899 (1039)
.|+..++..+++.++..+.||+|+|+||+|+++| +++++|++|||++++|++||+. +...+.+.|+..-+..+++.+.
T Consensus 709 ~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~-~~~~~~~~~~~~g~~~~~~~~~ 786 (902)
T PRK10517 709 SNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRW-NPADLGRFMVFFGPISSIFDIL 786 (902)
T ss_pred hhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888887776668999999999999999 7899999999999999999972 2233444443322222222222
Q ss_pred HHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHH--Hh-
Q 001638 900 VLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVII--VE- 976 (1039)
Q Consensus 900 v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~--v~- 976 (1039)
.++++.+ .++..........+|..|.+++++|++|.+|+|+.+ . ++|+|+..+..++++++++++. ++
T Consensus 787 ~~~~~~~----~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~p~ 857 (902)
T PRK10517 787 TFCLMWW----VFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR-I----PFIQSRAAWPLMIMTLIVMAVGIALPF 857 (902)
T ss_pred HHHHHHH----HccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCC-C----CcccchHHHHHHHHHHHHHHHHHHhhH
Confidence 2221111 111110000012345569999999999999999863 2 3456666666666666665443 45
Q ss_pred -hhhhhhcccCCC--hHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 977 -LLGTFATTVPLN--WKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 977 -~~~~~~~~~~l~--~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
+++.+|++.||+ +..|+++++++++ ++.++.|.+-.
T Consensus 858 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~ 896 (902)
T PRK10517 858 SPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYS 896 (902)
T ss_pred HHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 578899999999 7888888877776 55677776543
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=5.5e-133 Score=1251.84 Aligned_cols=819 Identities=24% Similarity=0.340 Sum_probs=691.7
Q ss_pred CHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCccc
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVY 198 (1039)
Q Consensus 119 gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~ 198 (1039)
.++++.+.|+++. +||+++|+++|+++||+|+++.++++++|++++++|+++++++|+++++++++.+ .|+
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~~~ 89 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------DLE 89 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------hHH
Confidence 6788999999986 6999999999999999999999988999999999999999999999999999875 688
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEe------CCeEEEEEcCCcccCcEEEEcCCCcccccEE
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTR------DGYRKKLSIYDLVVGDIVHLSIGDQVPADGI 272 (1039)
Q Consensus 199 d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR------~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgi 272 (1039)
+++.|++.+++..+++.+++++.++..+++.+.. +..++|+| ||++++|+++||||||+|.|++||+|||||+
T Consensus 90 ~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ 168 (867)
T TIGR01524 90 ATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADAR 168 (867)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEE
Confidence 8999998888999999999999998888887754 46899999 9999999999999999999999999999999
Q ss_pred EEeeCceeEeccCCCCCCCccccCCCC------------ceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCC
Q 001638 273 LISGYSLTIDESSLSGETEPVHINRDR------------PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDE 340 (1039)
Q Consensus 273 ll~g~~l~VDES~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~ 340 (1039)
+++|++|.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|++||+.+++.+ ..++
T Consensus 169 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~~ 247 (867)
T TIGR01524 169 VISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RRGQ 247 (867)
T ss_pred EEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CCCC
Confidence 999999999999999999999997643 579999999999999999999999999999999988 7778
Q ss_pred CchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHH
Q 001638 341 TPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420 (1039)
Q Consensus 341 tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~ 420 (1039)
+|+|++++++++++..++++++.++++++.+ .. ..+...+..++++++++||||||++++++
T Consensus 248 t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~~---------------~~~~~~~~~al~l~v~~iP~~Lp~~vt~~ 309 (867)
T TIGR01524 248 TAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---MK---------------GDWLEAFLFALAVAVGLTPEMLPMIVSSN 309 (867)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHheehHHH---hc---------------CCHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 9999999999999988887777666554321 10 12346788899999999999999999999
Q ss_pred HHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHH
Q 001638 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQ 500 (1039)
Q Consensus 421 la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 500 (1039)
++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++..... . +++. + .
T Consensus 310 la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~-------~--------~~~~---l-~ 370 (867)
T TIGR01524 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE-------T--------SERV---L-K 370 (867)
T ss_pred HHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC-------C--------HHHH---H-H
Confidence 999999999999999999999999999999999999999999999987531110 0 1112 2 2
Q ss_pred HHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeC
Q 001638 501 SIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKG 580 (1039)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KG 580 (1039)
.++.|+... ...+||+|.|+++++.... ....+..++.++.+||||++|||+++++..+ +.+++++||
T Consensus 371 ~a~l~~~~~---------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~-~~~~~~~KG 438 (867)
T TIGR01524 371 MAWLNSYFQ---------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRA-EVTRLICKG 438 (867)
T ss_pred HHHHhCCCC---------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCC-ceEEEEEeC
Confidence 222333211 1246999999999987532 2233457888999999999999999998765 567899999
Q ss_pred cHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcC-CCCCCCcEeeeeecccCCCC
Q 001638 581 ASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAE-SIPENNYTLIAVVGIKDPVR 659 (1039)
Q Consensus 581 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~-~~~e~~l~~lG~v~i~D~lR 659 (1039)
|||.++++|+++.. +|...+++++.++++++.+++|+++|+|++++|||+++.++.+. +..|++++|+|+++++||+|
T Consensus 439 a~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R 517 (867)
T TIGR01524 439 AVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPK 517 (867)
T ss_pred cHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCc
Confidence 99999999998754 56777899999999999999999999999999999886543211 12478999999999999999
Q ss_pred ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHH
Q 001638 660 PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILV 739 (1039)
Q Consensus 660 ~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V 739 (1039)
||++++|++|+++||+|+|+||||..||++||+++||.. +.+++|.+++.++++|+.+.++++.||||++|+||.++|
T Consensus 518 ~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV 595 (867)
T TIGR01524 518 ESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRII 595 (867)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999964 468999999999999999999999999999999999999
Q ss_pred HHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Q 001638 740 TQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLT 819 (1039)
Q Consensus 740 ~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~ 819 (1039)
+.+|++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|+.++++||++|+||+|+++|+++
T Consensus 596 ~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls 673 (867)
T TIGR01524 596 GLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTAS 673 (867)
T ss_pred HHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999 999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 001638 820 VNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQII 899 (1039)
Q Consensus 820 ~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~ 899 (1039)
.|+..++..+++.++..+.||+++|+||+|++|| +|+++|++|||++++|++||+ ++++.+.+.+ +..+++..+
T Consensus 674 ~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~~~----~~~g~~~~~ 747 (867)
T TIGR01524 674 SNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGRFM----LCIGPVSSI 747 (867)
T ss_pred hhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHHHH----HHHHHHHHH
Confidence 9999998888888777779999999999999999 799999999999999987776 6665544443 334444332
Q ss_pred HHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHHHH--hh
Q 001638 900 VLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIV--EL 977 (1039)
Q Consensus 900 v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~v--~~ 977 (1039)
+.+..++.....+...+.......+|..|.+++++|++|.+|+|+.+. ++|+|+..+..+++++++|++++ ++
T Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~ 822 (867)
T TIGR01524 748 FDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPF 822 (867)
T ss_pred HHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhch
Confidence 221111111111111111111234688899999999999999998632 34567888888888877776554 45
Q ss_pred --hhhhhcccCC--ChHHHHHHHHHHHHHHHHHHHHhhhccC
Q 001638 978 --LGTFATTVPL--NWKLWLASVVIGAISMPFGVLLKCIPVG 1015 (1039)
Q Consensus 978 --~~~~~~~~~l--~~~~w~~~i~~~~~~~~~~~~~k~i~~~ 1015 (1039)
++.+|++.|+ ++..|++++.++++ ++.++.|.+-.+
T Consensus 823 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~ 862 (867)
T TIGR01524 823 SPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYIR 862 (867)
T ss_pred hhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 4789999987 66788888877765 567788865444
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.9e-120 Score=1125.33 Aligned_cols=744 Identities=23% Similarity=0.351 Sum_probs=624.1
Q ss_pred CCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHH
Q 001638 134 GVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIV 213 (1039)
Q Consensus 134 GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v 213 (1039)
||+++|+++|+++||+|++++++ +++|..++++|+++++++|+++++++++++ .|++++.|++.+++...+
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~~i 71 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNATI 71 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHHHH
Confidence 89999999999999999999844 567899999999999999999999999886 588888888888888888
Q ss_pred HHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCcc
Q 001638 214 TAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPV 293 (1039)
Q Consensus 214 ~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv 293 (1039)
+.+++++.++..+++.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+
T Consensus 72 ~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV 150 (755)
T TIGR01647 72 GFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPV 150 (755)
T ss_pred HHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccce
Confidence 999999999999888764 4668999999999999999999999999999999999999999998899999999999999
Q ss_pred ccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 294 HINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRF 373 (1039)
Q Consensus 294 ~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~ 373 (1039)
.|..+ +.+|+||.|.+|+++++|++||.+|++|+|.+++.+++.+++|+|+.+++++.++..+.+++++++++++...
T Consensus 151 ~K~~~-~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~- 228 (755)
T TIGR01647 151 TKKTG-DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFG- 228 (755)
T ss_pred EeccC-CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 99865 5699999999999999999999999999999999988888999999999999999888777776666543210
Q ss_pred HHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEec
Q 001638 374 LVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTD 453 (1039)
Q Consensus 374 ~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~D 453 (1039)
. ..++...+..++++++++|||+||+++|++++.++++|+|+|++||+++++|+||++|+||||
T Consensus 229 -~---------------~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~D 292 (755)
T TIGR01647 229 -R---------------GESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSD 292 (755)
T ss_pred -c---------------CCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEec
Confidence 1 012446788899999999999999999999999999999999999999999999999999999
Q ss_pred CcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHH
Q 001638 454 KTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFG 533 (1039)
Q Consensus 454 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a 533 (1039)
||||||+|+|+|.+++..+..+ +++ +.+..+..++. ...+||+|.|+++++
T Consensus 293 KTGTLT~~~~~v~~~~~~~~~~---------------~~~--~~l~~a~~~~~------------~~~~~pi~~Ai~~~~ 343 (755)
T TIGR01647 293 KTGTLTLNKLSIDEILPFFNGF---------------DKD--DVLLYAALASR------------EEDQDAIDTAVLGSA 343 (755)
T ss_pred CCCccccCceEEEEEEecCCCC---------------CHH--HHHHHHHHhCC------------CCCCChHHHHHHHHH
Confidence 9999999999999998643210 111 12222222221 124699999999988
Q ss_pred HHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHH
Q 001638 534 LILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNV 613 (1039)
Q Consensus 534 ~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 613 (1039)
.+.+ ..+..+++++.+||+|.+|+|+++++.+++++.+.++||+||.++++|++. ++.++++++.
T Consensus 344 ~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~ 408 (755)
T TIGR01647 344 KDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEK 408 (755)
T ss_pred HHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHH
Confidence 7543 234567889999999999999999886543667789999999999999742 3456678888
Q ss_pred HHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Q 001638 614 INGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE 693 (1039)
Q Consensus 614 i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~ 693 (1039)
+++++++|+|++++|||+ .|++++|+|+++++||+|||++++|++||++||+|+|+|||++.||++||++
T Consensus 409 ~~~~~~~G~rvl~vA~~~----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~ 478 (755)
T TIGR01647 409 VDELASRGYRALGVARTD----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR 478 (755)
T ss_pred HHHHHhCCCEEEEEEEEc----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 999999999999999983 2478999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC---CCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 694 CGILTD---GGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 694 ~GI~~~---~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+||..+ .+.+.+|.+.+.++++++++.+.++.||||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||
T Consensus 479 lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGI 557 (755)
T TIGR01647 479 LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGI 557 (755)
T ss_pred cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeE
Confidence 999753 2345566677788999999999999999999999999999999999 999999999999999999999999
Q ss_pred eecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 001638 771 AMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNM 850 (1039)
Q Consensus 771 amgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnl 850 (1039)
||| +|+|+||++||+||+||||++|++++++||++|+||+|+++|+++.|+..+++.+++.++.+ .||+|+|+||+|+
T Consensus 558 Am~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l 635 (755)
T TIGR01647 558 AVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAI 635 (755)
T ss_pred Eec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHH
Confidence 999 89999999999999999999999999999999999999999999999998887777766555 4699999999999
Q ss_pred HhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc---ccccCCC-CccchhhHH
Q 001638 851 IMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKK---ILKLSGP-NATLILNTF 926 (1039)
Q Consensus 851 i~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~---~~~~~~~-~~~~~~~T~ 926 (1039)
++|. +++++++|++++. ++| ++..++ .+++.++..+++..+..+.++++... +....+. ......+|+
T Consensus 636 ~~d~-~~~~l~~~~~~~~---~~p---~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 707 (755)
T TIGR01647 636 LNDG-TIMTIAYDNVKPS---KLP---QRWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSL 707 (755)
T ss_pred HHhH-hHhhccCCCCCCC---CCC---CccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHH
Confidence 9996 6999999998752 333 333344 66666777777766654444332211 1111111 122357899
Q ss_pred HHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHH
Q 001638 927 IFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVI 973 (1039)
Q Consensus 927 ~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~ 973 (1039)
.|.++++.|.|+.+++|+.. ..|+. ..|++++..+++.+++..+
T Consensus 708 ~f~~~~~~~~~~~~~~r~~~--~~~~~-~p~~~l~~~~~~~~~~~~~ 751 (755)
T TIGR01647 708 IYLQVSISGQATIFVTRTHG--FFWSE-RPGKLLFIAFVIAQIIATF 751 (755)
T ss_pred HHHHHHHHHHHHHheeccCC--CCccc-CCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999853 23333 3555555555554444443
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2e-118 Score=1143.40 Aligned_cols=794 Identities=22% Similarity=0.322 Sum_probs=636.6
Q ss_pred CCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHH
Q 001638 132 PDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVV 211 (1039)
Q Consensus 132 ~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~ 211 (1039)
..||+.+|+++|++.||.|+++.++ +++|+++++++.+|+++++++++++++.- +.|++++.|++.+++..
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~~~ 207 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSSTSI 207 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHHHH
Confidence 4699999999999999999999854 79999999999999999988886666542 25788888777777766
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEc--CCCcccccEEEEeeCceeEeccCCCCC
Q 001638 212 IVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLS--IGDQVPADGILISGYSLTIDESSLSGE 289 (1039)
Q Consensus 212 ~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~--~Gd~VPaDgill~g~~l~VDES~LTGE 289 (1039)
.++.+++++..++.+++.. .+..++|+|||++++|+++||||||||.|+ +||+|||||++++|+ +.||||+||||
T Consensus 208 ~~~~~~~~k~~~~L~~~~~--~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGE 284 (1054)
T TIGR01657 208 SLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGE 284 (1054)
T ss_pred HHHHHHHHHHHHHHHHhhc--CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCC
Confidence 6666666665555555432 356899999999999999999999999999 999999999999995 69999999999
Q ss_pred CCccccCCC-----------------CceeecccEEee-------CCeEEEEEEeccchhhHHHHHHhccCCCCCCchHH
Q 001638 290 TEPVHINRD-----------------RPFLLSGTKVQD-------GSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQV 345 (1039)
Q Consensus 290 s~pv~k~~~-----------------~~~l~sGt~v~~-------G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~ 345 (1039)
|.|+.|.+. ++++|+||.|.+ |.+.++|++||.+|..|++.+++......++++++
T Consensus 285 S~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~ 364 (1054)
T TIGR01657 285 SVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYK 364 (1054)
T ss_pred ccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHH
Confidence 999999641 347999999985 78999999999999999999999887788899988
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHH
Q 001638 346 KLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAM 425 (1039)
Q Consensus 346 ~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~ 425 (1039)
.+.++...+..+ +++.+++++...+.. ...+...+..++++++++||+|||+++++++++++
T Consensus 365 ~~~~~~~~l~~~----a~i~~i~~~~~~~~~--------------~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~ 426 (1054)
T TIGR01657 365 DSFKFILFLAVL----ALIGFIYTIIELIKD--------------GRPLGKIILRSLDIITIVVPPALPAELSIGINNSL 426 (1054)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHc--------------CCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 877665544333 333333222111110 01345678889999999999999999999999999
Q ss_pred HHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhc
Q 001638 426 KKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQN 505 (1039)
Q Consensus 426 ~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 505 (1039)
+||+|+|++||++.++|++|++|++|||||||||+|+|+|.+++..+...... . .... ........+...++.|
T Consensus 427 ~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~---~--~~~~-~~~~~~~~~~~~~a~C 500 (1054)
T TIGR01657 427 ARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL---K--IVTE-DSSLKPSITHKALATC 500 (1054)
T ss_pred HHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc---c--cccc-ccccCchHHHHHHHhC
Confidence 99999999999999999999999999999999999999999998754321100 0 0000 0001112234455666
Q ss_pred cCCceeecCCCCccccCCchHHHHHHHHHHh-CC--C--ccc----------ccccccEEEEecCCCCCCceEEEEEcCC
Q 001638 506 TGSEVVKDKDGRTNILGTPTERAILEFGLIL-GG--D--STF----------HREESAIVKVEPFNSVKKRMSVLVSLPN 570 (1039)
Q Consensus 506 ~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-g~--~--~~~----------~~~~~~il~~~pF~s~rkrmsvvv~~~~ 570 (1039)
++..... + ...|||+|.|+++++... .. + ... ...++++++.+||+|++|||||+++.++
T Consensus 501 ~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~ 575 (1054)
T TIGR01657 501 HSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTND 575 (1054)
T ss_pred CeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcC
Confidence 6654321 2 567999999999975311 11 0 000 0246889999999999999999999765
Q ss_pred CCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCC------CcCCCCCC
Q 001638 571 NGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNH------KAESIPEN 644 (1039)
Q Consensus 571 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~------~~~~~~e~ 644 (1039)
++++++|+|||||.|+++|++. +.++.+.+.+++|+++|+||+++|||++++.+ .+.+..|+
T Consensus 576 ~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~ 643 (1054)
T TIGR01657 576 ERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVES 643 (1054)
T ss_pred CCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhc
Confidence 4678899999999999999841 12356788899999999999999999987422 12245789
Q ss_pred CcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC------------------------
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG------------------------ 700 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~------------------------ 700 (1039)
||+|+|+++|+||+||+++++|+.|+++||+|+|+||||+.||.+||++|||..++
T Consensus 644 ~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~ 723 (1054)
T TIGR01657 644 NLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVI 723 (1054)
T ss_pred CceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEec
Confidence 99999999999999999999999999999999999999999999999999997533
Q ss_pred -----------------------------CceeeCccccc---CCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCC
Q 001638 701 -----------------------------GLAIEGTDFRS---KNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKE 748 (1039)
Q Consensus 701 -----------------------------~~vi~G~~~~~---~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~ 748 (1039)
..+++|++++. +.++++.+++.++.||||++|+||.++|+.||+. |+
T Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~-g~ 802 (1054)
T TIGR01657 724 DSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL-DY 802 (1054)
T ss_pred CccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-CC
Confidence 14677777755 4567899999999999999999999999999999 99
Q ss_pred EEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 749 VVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVIN 828 (1039)
Q Consensus 749 ~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~ 828 (1039)
+|+|||||+||+||||+|||||||| . +|+ ..+||+++.+|||++|+++|+|||+++.|+++.++|.+.+++...+..
T Consensus 803 ~V~m~GDG~ND~~ALK~AdVGIam~-~-~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~ 879 (1054)
T TIGR01657 803 TVGMCGDGANDCGALKQADVGISLS-E-AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSV 879 (1054)
T ss_pred eEEEEeCChHHHHHHHhcCcceeec-c-ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 3 354 489999999999999999999999999999999999999998875543
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001638 829 FVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCG 908 (1039)
Q Consensus 829 ~~~~~~~~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~ 908 (1039)
++ ++...+||+++|+||+|+++|++++++++.++|.+++|++||. ++++++.++..+++|+++++++.++.++..
T Consensus 880 ~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~---~~l~~~~~~~si~~q~~i~~~~~~~~~~~~ 954 (1054)
T TIGR01657 880 SI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP---SNLFSVYILTSVLIQFVLHILSQVYLVFEL 954 (1054)
T ss_pred HH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---ccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 3334589999999999999999999999999999999999994 689999999999999999988776665543
Q ss_pred cc--ccc------cCCCCccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHHHHH----HHh
Q 001638 909 KK--ILK------LSGPNATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVI----IVE 976 (1039)
Q Consensus 909 ~~--~~~------~~~~~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~----~v~ 976 (1039)
.. |+. .++.......+|++| .++.+|.++.+++++. ..++.+++++|+.|+..++++++++++ +++
T Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1054)
T TIGR01657 955 HAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHP 1032 (1054)
T ss_pred hhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCH
Confidence 22 321 111112234579999 5555666666777775 344455889999888877777666552 246
Q ss_pred hhhhhhcccCCCh
Q 001638 977 LLGTFATTVPLNW 989 (1039)
Q Consensus 977 ~~~~~~~~~~l~~ 989 (1039)
+++.+|+++|++.
T Consensus 1033 ~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 1033 LLGKILQIVPLPQ 1045 (1054)
T ss_pred HHHhhheeeeCCH
Confidence 7899999999985
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-122 Score=1055.09 Aligned_cols=872 Identities=28% Similarity=0.415 Sum_probs=731.4
Q ss_pred CCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccC---CC--CC
Q 001638 118 GGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGI---PT--EG 192 (1039)
Q Consensus 118 ~gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~---~~--~~ 192 (1039)
..++++++++.+|..+||+.+++.+++++-|+|.+++|+..+-|..+.+|+.....++++++++++++... ++ +.
T Consensus 42 ~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~ 121 (1019)
T KOG0203|consen 42 LSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDP 121 (1019)
T ss_pred CCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999998865432 11 11
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccc
Q 001638 193 WPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDK---EKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPA 269 (1039)
Q Consensus 193 ~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~---~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 269 (1039)
..+..|-+..+ ..+++++.+-.|.|+.+-.+..+ ..-+..++|+|||..+.+..+||||||+|.++-||+|||
T Consensus 122 ~~~nly~giiL----~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPA 197 (1019)
T KOG0203|consen 122 SDDNLYLGIVL----AAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPA 197 (1019)
T ss_pred CCcceEEEEEE----EEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccc
Confidence 22344444322 23344555555555555444433 244678999999999999999999999999999999999
Q ss_pred cEEEEeeCceeEeccCCCCCCCccccC---------CCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCC
Q 001638 270 DGILISGYSLTIDESSLSGETEPVHIN---------RDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDE 340 (1039)
Q Consensus 270 Dgill~g~~l~VDES~LTGEs~pv~k~---------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~ 340 (1039)
|.+++++.++++|+|+|||||+|...+ +..|+-|.+|.+.+|.++++|.+||.+|..|+|..+...-+..+
T Consensus 198 DiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~ 277 (1019)
T KOG0203|consen 198 DIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGK 277 (1019)
T ss_pred eeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCC
Confidence 999999999999999999999999876 23567899999999999999999999999999999988888899
Q ss_pred CchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHH
Q 001638 341 TPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420 (1039)
Q Consensus 341 tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~ 420 (1039)
+|++...+++..++..+++.+++..|++.++. ...++.++...+.++++.+|+|||..+|..
T Consensus 278 t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~------------------gy~~l~avv~~i~iivAnvPeGL~~tvTv~ 339 (1019)
T KOG0203|consen 278 TPIAKEIEHFIHIITGVAIFLGISFFILALIL------------------GYEWLRAVVFLIGIIVANVPEGLLATVTVC 339 (1019)
T ss_pred CcchhhhhchHHHHHHHHHHHHHHHHHHHHhh------------------cchhHHHhhhhheeEEecCcCCccceehhh
Confidence 99999999999999888877777666543321 123456666788999999999999999999
Q ss_pred HHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHH
Q 001638 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQ 500 (1039)
Q Consensus 421 la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 500 (1039)
++...+||++++.+||++.+.|++|+.++||+|||||||+|+|+|.++|.++...+....++........++.....+..
T Consensus 340 LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r 419 (1019)
T KOG0203|consen 340 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSR 419 (1019)
T ss_pred HHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876543222111111111122344455556
Q ss_pred HHHhccCCceeecCCC----CccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCC--CCeE
Q 001638 501 SIFQNTGSEVVKDKDG----RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPN--NGGF 574 (1039)
Q Consensus 501 ~~~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~--~~~~ 574 (1039)
.++.|+.+.....+.+ +....|++.|.||++|+...-.+....|+.++.+...||||.+|+.-.+.+..+ +.++
T Consensus 420 ~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~ 499 (1019)
T KOG0203|consen 420 IATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRF 499 (1019)
T ss_pred HHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccc
Confidence 6666766655433333 336789999999999999877777888999999999999999999988876553 2467
Q ss_pred EEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCC---------CcCCCCCCC
Q 001638 575 RVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNH---------KAESIPENN 645 (1039)
Q Consensus 575 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~---------~~~~~~e~~ 645 (1039)
.+..|||||.++++|+.+. .+|+..|++++.++.+.+...++...|-|+++||++.++++. +....+..+
T Consensus 500 ~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~n 578 (1019)
T KOG0203|consen 500 LLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDN 578 (1019)
T ss_pred eeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchh
Confidence 7889999999999999875 578899999999999999999999999999999999887543 222456789
Q ss_pred cEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC------------------------CC
Q 001638 646 YTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD------------------------GG 701 (1039)
Q Consensus 646 l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~------------------------~~ 701 (1039)
+.|+|++.+-||+|..+++|+..||.|||+|+|+|||++.||++||++.||..+ ..
T Consensus 579 l~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a 658 (1019)
T KOG0203|consen 579 LRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKA 658 (1019)
T ss_pred ccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccce
Confidence 999999999999999999999999999999999999999999999999998763 24
Q ss_pred ceeeCcccccCCHHHHHhhcccc--eEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHH
Q 001638 702 LAIEGTDFRSKNPQEMQELIPKL--QVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEV 779 (1039)
Q Consensus 702 ~vi~G~~~~~~~~~~~~~~~~~~--~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ 779 (1039)
.|+.|.++.+++++++++++.+. -||||.||+||+.+|+..|+. |.+|++||||+||+||||+||||||||++|+|+
T Consensus 659 ~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv 737 (1019)
T KOG0203|consen 659 AVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 737 (1019)
T ss_pred EEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccccchH
Confidence 68999999999999999999655 399999999999999999999 999999999999999999999999999999999
Q ss_pred HHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhH
Q 001638 780 AKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALA 859 (1039)
Q Consensus 780 ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~ala 859 (1039)
+|++||+||+||||++|+..+++||-+|+|.||.|.|.|+.|+..+...+++.+++.|.|+.++++|.+.+..|..||++
T Consensus 738 sKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiS 817 (1019)
T KOG0203|consen 738 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAIS 817 (1019)
T ss_pred HHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhh
Confidence 99999999999999999999999999999999999999999999999988888888999999999999999999999999
Q ss_pred hccCCCCccccCCCCCC-CCCCcchHHHHHHHHHH-HHHHHHHHHHHHHhcc---ccc-----cc------------CCC
Q 001638 860 LATEPPHEGLMQRPPIG-RNVHFITVTMWRNIIGQ-SIYQIIVLGVLTFCGK---KIL-----KL------------SGP 917 (1039)
Q Consensus 860 la~e~p~~~lm~~~P~~-~~~~li~~~~~~~i~~~-~i~q~~v~~~l~~~~~---~~~-----~~------------~~~ 917 (1039)
||+|+|+.|+|+|+|+. +++.++|+++...-.+| ++.|++..++-+|... .++ ++ ..+
T Consensus 818 LAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~Ds 897 (1019)
T KOG0203|consen 818 LAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDS 897 (1019)
T ss_pred HhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhh
Confidence 99999999999999998 88899998876444443 5667665554443211 111 11 000
Q ss_pred C-----------ccchhhHHHHHHHHHHHHHHHHHhccccccccccccchhHHHHHHHHHHHHH--HHHHHhhhhhhhcc
Q 001638 918 N-----------ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGF--QVIIVELLGTFATT 984 (1039)
Q Consensus 918 ~-----------~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~--q~~~v~~~~~~~~~ 984 (1039)
+ -+...+|..|.++|.+|+++.+.|.+. +-++|..-++||++++.++..+.+ ++.+++.....+++
T Consensus 898 yGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTR-RnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~ 976 (1019)
T KOG0203|consen 898 YGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTR-RNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGM 976 (1019)
T ss_pred ccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcc-hhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhcc
Confidence 0 123457889999999999999998876 567888779999988777765444 44456667789999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 985 VPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 985 ~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1014 (1039)
.|+.|.+|+..+..+++.++.+++.|++-+
T Consensus 977 ~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR 1006 (1019)
T KOG0203|consen 977 YPLKFQWWLVAFPFGILIFVYDEVRKLFIR 1006 (1019)
T ss_pred CCCCcEEEEecccceeeeeeHHHHHhHhhh
Confidence 999999999999999999999999998755
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=5.6e-108 Score=1050.54 Aligned_cols=829 Identities=22% Similarity=0.303 Sum_probs=639.2
Q ss_pred cCCCccCCCCCCcHH----HHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 001638 147 YGFNRYAEKPARSFW----MFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQS 222 (1039)
Q Consensus 147 ~G~N~~~~~~~~s~~----~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~ 222 (1039)
|..|.+...+ +++| ..+|+||+++.+++|++++++++++.+...+ ..+.++++++++.++++.++.++
T Consensus 1 ~~~N~i~tsk-Y~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~-------~~t~~~pL~~v~~~~~~~~~~ed 72 (1057)
T TIGR01652 1 FCSNKISTTK-YTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY-------RGTSIVPLAFVLIVTAIKEAIED 72 (1057)
T ss_pred CCCCcccCcc-CcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC-------ccHhHHhHHHHHHHHHHHHHHHH
Confidence 5678887666 4444 6789999999999999999999998775432 23456788888889999999999
Q ss_pred HHHHHHhcccCCceEEEEeC-CeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc----eeEeccCCCCCCCccccCC
Q 001638 223 LQFKALDKEKKNLIVQVTRD-GYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS----LTIDESSLSGETEPVHINR 297 (1039)
Q Consensus 223 ~~~~~l~~~~~~~~v~ViR~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGEs~pv~k~~ 297 (1039)
.++++.++..++..++|+|+ |++++++++||+|||+|.|++||+|||||+++++++ ++||||+|||||.|+.|..
T Consensus 73 ~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~ 152 (1057)
T TIGR01652 73 IRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQA 152 (1057)
T ss_pred HHHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeec
Confidence 99999999888899999997 899999999999999999999999999999999755 8999999999999998752
Q ss_pred -----------------------------------------------CCceeecccEEee-CCeEEEEEEeccchhhHHH
Q 001638 298 -----------------------------------------------DRPFLLSGTKVQD-GSGKMLVTSVGMRTEWGRL 329 (1039)
Q Consensus 298 -----------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~gki 329 (1039)
.++++++||.+.+ |++.++|++||.+|.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~--- 229 (1057)
T TIGR01652 153 LEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL--- 229 (1057)
T ss_pred chhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh---
Confidence 1257899999999 9999999999999955
Q ss_pred HHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh-------hhHHHHHHHHHHH
Q 001638 330 MVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI-------DAMKLLNYFAIAV 402 (1039)
Q Consensus 330 ~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~-------~~~~~~~~~~~ai 402 (1039)
+.+......++++++++++++...+..+.++++++++++... ... ......|+.. ....++..|..++
T Consensus 230 ~~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~---~~~--~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 304 (1057)
T TIGR01652 230 MRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGI---WND--AHGKDLWYIRLDVSERNAAANGFFSFLTFL 304 (1057)
T ss_pred hhcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh---eec--ccCCCccceecCcccccchhHHHHHHHHHH
Confidence 455566677889999999999888776666555554443211 110 0011134321 1123444667788
Q ss_pred HHHHhhhcCchhHHHHHHHHHHH------HHhhcc----ccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcC
Q 001638 403 TIVVVAVPEGLPLAVTLSLAFAM------KKLMND----KALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICN 472 (1039)
Q Consensus 403 ~ilvvavP~~Lplavtl~la~~~------~~m~~~----~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 472 (1039)
.++..++|++||..++++++.++ .+|.++ +++||+++++|+||++++||+|||||||+|+|+++++++++
T Consensus 305 ~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g 384 (1057)
T TIGR01652 305 ILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAG 384 (1057)
T ss_pred HHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECC
Confidence 89999999999999999999998 788875 49999999999999999999999999999999999999987
Q ss_pred cccccccCC-------ccc-----------c-----------cC----CCCCHHHHHHHHHHHHhccCCceeecCCC---
Q 001638 473 EAKTIKSGD-------NEK-----------L-----------LK----PSVSDAVFNIFLQSIFQNTGSEVVKDKDG--- 516 (1039)
Q Consensus 473 ~~~~~~~~~-------~~~-----------~-----------~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--- 516 (1039)
..|.....+ ... . .. ..-..+....+..+++.|++..+..++++
T Consensus 385 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~ 464 (1057)
T TIGR01652 385 VSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEE 464 (1057)
T ss_pred EEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCc
Confidence 655321100 000 0 00 00001123344556677777655431222
Q ss_pred CccccCCchHHHHHHHHHHhCCCccc--------------ccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcH
Q 001638 517 RTNILGTPTERAILEFGLILGGDSTF--------------HREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGAS 582 (1039)
Q Consensus 517 ~~~~~g~p~e~All~~a~~~g~~~~~--------------~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~ 582 (1039)
..+..|||+|.||+++|...|+.+.. ...++++++++||+|+||||||+++.++ +++.+|+||||
T Consensus 465 ~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~-~~~~l~~KGA~ 543 (1057)
T TIGR01652 465 ITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPD-GRIKLLCKGAD 543 (1057)
T ss_pred eEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCC-CeEEEEEeCcH
Confidence 23567999999999999999876542 2246899999999999999999999877 78999999999
Q ss_pred HHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc-----------------------C
Q 001638 583 EIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA-----------------------E 639 (1039)
Q Consensus 583 e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~-----------------------~ 639 (1039)
|.|+++|+.. +++.++.+.+.+++|+.+|+||+++|||.+++++.. .
T Consensus 544 e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~ 613 (1057)
T TIGR01652 544 TVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVA 613 (1057)
T ss_pred HHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 9999999741 234567888999999999999999999999754210 1
Q ss_pred CCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC------------------
Q 001638 640 SIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG------------------ 701 (1039)
Q Consensus 640 ~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~------------------ 701 (1039)
+..|+|++|+|++|++||+||||+++|+.|++|||+|||+|||+.+||.+||++|||.+++.
T Consensus 614 ~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~ 693 (1057)
T TIGR01652 614 ESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEA 693 (1057)
T ss_pred HHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHH
Confidence 24689999999999999999999999999999999999999999999999999999986532
Q ss_pred -----------------------ceeeCcccccCCHH----HHHhhcccc--eEEEecChhhHHHHHHHHhhcCCCEEEE
Q 001638 702 -----------------------LAIEGTDFRSKNPQ----EMQELIPKL--QVMARSSPTDKYILVTQLRNVFKEVVAV 752 (1039)
Q Consensus 702 -----------------------~vi~G~~~~~~~~~----~~~~~~~~~--~v~ar~sP~~K~~~V~~l~~~~g~~V~~ 752 (1039)
++++|++++.+.++ ++.+++..+ .|+||++|+||.++|+.+|+..|++|+|
T Consensus 694 ~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~ 773 (1057)
T TIGR01652 694 AIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLA 773 (1057)
T ss_pred HHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEE
Confidence 36778877755443 345555554 4999999999999999999866899999
Q ss_pred EcCCccCHHHhhhCCcceeecCCCcH--HHHhccCEEeecCCchHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 753 TGNGTNDAPALHEADIGLAMGIAGTE--VAKENADVIIMDDNFTTIVTVA-RWGRSVYINIQKFVQFQLTVNIVALVINF 829 (1039)
Q Consensus 753 ~GDG~ND~~aL~~AdVGIamgi~gt~--~ak~~aDivl~dd~f~~i~~~i-~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~ 829 (1039)
+|||+||+|||++||||| |+.|+| .|+++||++|.+ |..+.+++ .+||++|+|++++++|++++|++.+++.+
T Consensus 774 iGDG~ND~~mlk~AdVGI--gi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~ 849 (1057)
T TIGR01652 774 IGDGANDVSMIQEADVGV--GISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849 (1057)
T ss_pred EeCCCccHHHHhhcCeee--EecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 557888 499999999985 99999987 88999999999999999999999999999
Q ss_pred HHHHHcCC---CchHHHHHHHHHHHhhHHHHhHhcc--CCCCccccCCCCC----CCCCCcchHHHHHHHHHHHHHHHHH
Q 001638 830 VAACITGS---APLTAVQLLWVNMIMDTLGALALAT--EPPHEGLMQRPPI----GRNVHFITVTMWRNIIGQSIYQIIV 900 (1039)
Q Consensus 830 ~~~~~~~~---~pl~~~qll~vnli~d~l~alala~--e~p~~~lm~~~P~----~~~~~li~~~~~~~i~~~~i~q~~v 900 (1039)
++.+++++ +|++++|++|+|+++|++|++++|. +++++++|.++|+ ++++++++...+..++..++||+++
T Consensus 850 ~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~i 929 (1057)
T TIGR01652 850 WYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLV 929 (1057)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 99887654 5789999999999999999999975 6778889999997 6677788877776677899999988
Q ss_pred HHHHHHhcccccc--cCCCCc-cchhhHHHHHHHHHHHHHHH-HHhccccccccccccchhHHHHHHHHHHHHHHH----
Q 001638 901 LGVLTFCGKKILK--LSGPNA-TLILNTFIFNSFVFCQVFNE-INSRDMEKINVFRGIFSSWVFIAVLVATVGFQV---- 972 (1039)
Q Consensus 901 ~~~l~~~~~~~~~--~~~~~~-~~~~~T~~f~~~v~~qv~n~-~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~---- 972 (1039)
++++.+.....-. .+|... .....+++|.++++...+.. +.++.++ ++.++.+.+++++.+
T Consensus 930 i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt-----------~~~~~~~~~S~~~~~~~~~ 998 (1057)
T TIGR01652 930 IFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWN-----------WISLITIWGSILVWLIFVI 998 (1057)
T ss_pred HHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhH-----------HHHHHHHHHHHHHHHHHHH
Confidence 8776554322111 122211 23345666666665443322 2222221 111111222222222
Q ss_pred HHHhh------hhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 973 IIVEL------LGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 973 ~~v~~------~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
++..+ .+.+. ..--++.+|+.++++.++++++..+.|.+.....|
T Consensus 999 ~~~~~~~~~~~~~~~~-~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P 1049 (1057)
T TIGR01652 999 VYSSIFPSPAFYKAAP-RVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRP 1049 (1057)
T ss_pred HHHhhcccccHHHHHH-HHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 21111 11122 12246889999999999999999999999887777
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.5e-100 Score=970.84 Aligned_cols=835 Identities=20% Similarity=0.268 Sum_probs=626.0
Q ss_pred hcCCCccCCCCCCcHHHH----HHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 001638 146 VYGFNRYAEKPARSFWMF----VWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQ 221 (1039)
Q Consensus 146 ~~G~N~~~~~~~~s~~~~----~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~ 221 (1039)
.|..|.+...+ +++|.| +|+||+.+.++++++++++++++.+...+ ..+.+++++++++++++.++.+
T Consensus 86 ~f~~N~i~TsK-Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~-------~~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 86 EFAGNSIRTAK-YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG-------RGASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred cCCCCeeeccc-cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC-------cchHHHHHHHHHHHHHHHHHHH
Confidence 68899998765 666665 58999999999999999999988775543 2456789999999999999999
Q ss_pred HHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc----eeEeccCCCCCCCccccCC
Q 001638 222 SLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS----LTIDESSLSGETEPVHINR 297 (1039)
Q Consensus 222 ~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGEs~pv~k~~ 297 (1039)
+.++++.++..++..++|+|+|.++++++.||+|||+|.|++||+|||||+++++++ ++||||+|||||.|+.|..
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 999999999999999999999999999999999999999999999999999998543 7999999999999998751
Q ss_pred --------------------------------------------CCceeecccEEeeC-CeEEEEEEeccchhhHHHHHH
Q 001638 298 --------------------------------------------DRPFLLSGTKVQDG-SGKMLVTSVGMRTEWGRLMVT 332 (1039)
Q Consensus 298 --------------------------------------------~~~~l~sGt~v~~G-~~~~~V~~vG~~T~~gki~~~ 332 (1039)
.++++++||.+.+. ++.|+|++||++| |++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 13456777777764 6999999999999 67777
Q ss_pred hccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh--------------h-hHHHHHH
Q 001638 333 LSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI--------------D-AMKLLNY 397 (1039)
Q Consensus 333 ~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~--------------~-~~~~~~~ 397 (1039)
......+.+++++++|++...+..+.+++++++.++... |.........+..|+.. . .......
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV-WLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFT 393 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-hhccccccccccccccccccccccccccccchhhHHHHHH
Confidence 777778899999999999887776666555554443211 11100000001112210 0 0111222
Q ss_pred HHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccc----------cccccchhhhcccceeEEEecCcCccccCceEEEE
Q 001638 398 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDK----------ALVRHLSACETMGSASCICTDKTGTLTTNHMVVTK 467 (1039)
Q Consensus 398 ~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~----------ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~ 467 (1039)
|...+.++-..+|++|++.+.+.....+..|.+|. +.||+.+.+|+||++++||+|||||||+|+|++++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 33445566688999999999999977777777665 78999999999999999999999999999999999
Q ss_pred EEEcCcccccccCC-------------cc-----cccC----------CCCC---HHHHHHHHHHHHhccCCceee--cC
Q 001638 468 LWICNEAKTIKSGD-------------NE-----KLLK----------PSVS---DAVFNIFLQSIFQNTGSEVVK--DK 514 (1039)
Q Consensus 468 ~~~~~~~~~~~~~~-------------~~-----~~~~----------~~~~---~~~~~~l~~~~~~~~~~~~~~--~~ 514 (1039)
+++++..|+..... .. .... .... ......++.+++.||+..+.. +.
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 99987655321000 00 0000 0000 012234556677777765532 11
Q ss_pred -CC----CccccCCchHHHHHHHHHHhCC------------CcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEE
Q 001638 515 -DG----RTNILGTPTERAILEFGLILGG------------DSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVF 577 (1039)
Q Consensus 515 -~~----~~~~~g~p~e~All~~a~~~g~------------~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~ 577 (1039)
++ ..+..+||+|.||+.+|.++|+ +....+.+|++++++||+|+||||||+++.++ +.+.+|
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~-~~~~l~ 632 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPD-KTVKVF 632 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCC-CcEEEE
Confidence 11 1256669999999999999997 44445678999999999999999999999876 789999
Q ss_pred EeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc-------------------
Q 001638 578 CKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA------------------- 638 (1039)
Q Consensus 578 ~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~------------------- 638 (1039)
+|||||.|+++|++.. +++.++.+.+.+++|+++|||||++|||++++++.+
T Consensus 633 ~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~ 703 (1178)
T PLN03190 633 VKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAAL 703 (1178)
T ss_pred EecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHH
Confidence 9999999999998542 234567788999999999999999999999653211
Q ss_pred ----CCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC--------------
Q 001638 639 ----ESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-------------- 700 (1039)
Q Consensus 639 ----~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-------------- 700 (1039)
.+..|+||+++|+++++||+|++++++|+.|++|||+|||+|||+.+||.+||++|||.+++
T Consensus 704 l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~ 783 (1178)
T PLN03190 704 LRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESC 783 (1178)
T ss_pred HHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhH
Confidence 13468999999999999999999999999999999999999999999999999999997542
Q ss_pred -----------------------------------CceeeCcccccCCH----HHHHhhcccce--EEEecChhhHHHHH
Q 001638 701 -----------------------------------GLAIEGTDFRSKNP----QEMQELIPKLQ--VMARSSPTDKYILV 739 (1039)
Q Consensus 701 -----------------------------------~~vi~G~~~~~~~~----~~~~~~~~~~~--v~ar~sP~~K~~~V 739 (1039)
.++++|.++..+.+ +++.+++.++. |+||++|+||.++|
T Consensus 784 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV 863 (1178)
T PLN03190 784 RKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIV 863 (1178)
T ss_pred HHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHH
Confidence 14667777766654 45666666554 79999999999999
Q ss_pred HHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcH--HHHhccCEEeecCCchHHHHHH-HHhHHHHHHHHHHHHH
Q 001638 740 TQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE--VAKENADVIIMDDNFTTIVTVA-RWGRSVYINIQKFVQF 816 (1039)
Q Consensus 740 ~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~--~ak~~aDivl~dd~f~~i~~~i-~~gR~~~~nI~k~i~f 816 (1039)
+.+|+..+++|+|+|||+||+|||++||||| |++|+| .|+.+||+.|.+ |..+.+++ .|||+.|.|+.+.++|
T Consensus 864 ~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y 939 (1178)
T PLN03190 864 ALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILY 939 (1178)
T ss_pred HHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 9999875689999999999999999999999 888999 699999999986 99999985 6899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCc---hHHHHHHHHHHHhhHHHHhHhc-c--CCCCccccCCCCC---CCCCCcchHHHH
Q 001638 817 QLTVNIVALVINFVAACITGSAP---LTAVQLLWVNMIMDTLGALALA-T--EPPHEGLMQRPPI---GRNVHFITVTMW 887 (1039)
Q Consensus 817 ~l~~Ni~~i~~~~~~~~~~~~~p---l~~~qll~vnli~d~l~alala-~--e~p~~~lm~~~P~---~~~~~li~~~~~ 887 (1039)
.+++|++..+++|++++++++++ ++.+-+..+|++++++|.++++ . +-|.+.+++.|-. +++...++...+
T Consensus 940 ~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F 1019 (1178)
T PLN03190 940 NFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLF 1019 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHH
Confidence 99999999999999999987765 4677899999999999999986 2 4455555555543 455667776666
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHH-HHHhccccccccccccchhHHHHHHHHH
Q 001638 888 RNIIGQSIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFN-EINSRDMEKINVFRGIFSSWVFIAVLVA 966 (1039)
Q Consensus 888 ~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n-~~~~r~~~~~~~f~~~~~n~~f~~~~~~ 966 (1039)
..|+..|+||+++++++.++...-...++ ....++.+.+.|+..-+. .+.+++++..++ ..+++.+++
T Consensus 1020 ~~w~~~~i~qs~iiff~~~~~~~~~~~~~----~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~-------~~i~~Si~~ 1088 (1178)
T PLN03190 1020 WLTMIDTLWQSAVVFFVPLFAYWASTIDG----SSIGDLWTLAVVILVNLHLAMDIIRWNWITH-------AAIWGSIVA 1088 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcCc----eeEhHhhhhHHHHHHHHHHHHHHhhhhHHHH-------HHHHHHHHH
Confidence 66777899999988877654211001111 112233333333322111 222333221111 011122222
Q ss_pred HHHHHHHHH--hh---hhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 967 TVGFQVIIV--EL---LGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 967 ~~~~q~~~v--~~---~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
.+++.+++. ++ .+.++.+ --++.+|+..+++.+++++++.++|++.....|
T Consensus 1089 ~~i~~~~~~~~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P 1144 (1178)
T PLN03190 1089 TFICVIVIDAIPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTP 1144 (1178)
T ss_pred HHHHHHHHHhcccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222222221 10 1122221 236889999999999999999999998876666
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4e-93 Score=853.27 Aligned_cols=575 Identities=24% Similarity=0.362 Sum_probs=458.3
Q ss_pred HHHhhHHHHHHHHHHHHHhhccCCCC-----CCCCcccchhHHHHHHHHHHHHHHHHH----HHHHHHHHHHhcccCCce
Q 001638 166 EALHDLTLIILMICAAVSIGVGIPTE-----GWPDGVYDGLGIVLSILLVVIVTAVSD----YKQSLQFKALDKEKKNLI 236 (1039)
Q Consensus 166 ~~~~~~~~~il~v~a~ls~~~~~~~~-----~~~~~~~d~~~i~~~lllv~~v~a~~~----~~~~~~~~~l~~~~~~~~ 236 (1039)
.++++|..++|+++++++++++...+ +| .+++++.|++.+++.++++.+.+ ++.+++.+.|.+...+.+
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~--~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~ 105 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESV--SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMK 105 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 56789999999999999998876422 22 23567778777888888887774 555555666666544435
Q ss_pred EE-EEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCC---CceeecccEEeeCC
Q 001638 237 VQ-VTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRD---RPFLLSGTKVQDGS 312 (1039)
Q Consensus 237 v~-ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~---~~~l~sGt~v~~G~ 312 (1039)
++ |.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|+
T Consensus 106 a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~ 183 (673)
T PRK14010 106 ARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDW 183 (673)
T ss_pred EEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecce
Confidence 65 7799999999999999999999999999999999999976 9999999999999999876 56 99999999999
Q ss_pred eEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhH
Q 001638 313 GKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAM 392 (1039)
Q Consensus 313 ~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~ 392 (1039)
++++|+++|.+|++||+.+++++++.++||+|..+..+...+.. .+++++++... ... + .
T Consensus 184 ~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-----i~l~~~~~~~~--~~~--------~-----~ 243 (673)
T PRK14010 184 LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-----IFLVVILTMYP--LAK--------F-----L 243 (673)
T ss_pred EEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-----HHHHHHHHHHH--HHh--------h-----c
Confidence 99999999999999999999999898999999776655433321 11222211110 000 0 0
Q ss_pred HHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcC
Q 001638 393 KLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICN 472 (1039)
Q Consensus 393 ~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 472 (1039)
.+...+...++++|.+|||+||.+++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|++.+.++...+
T Consensus 244 ~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~ 323 (673)
T PRK14010 244 NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK 323 (673)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC
Confidence 11234567788888899999999999999999999999999999999999999999999999999999887776654211
Q ss_pred cccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEE
Q 001638 473 EAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKV 552 (1039)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~ 552 (1039)
.. +. .+++ .....|+.. ..||+++|+++++.+.+.+.... ..+.
T Consensus 324 ~~----------------~~--~~ll-~~a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~ 367 (673)
T PRK14010 324 SS----------------SF--ERLV-KAAYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEY 367 (673)
T ss_pred Cc----------------cH--HHHH-HHHHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcce
Confidence 10 11 1222 222222221 13899999999998776543221 1235
Q ss_pred ecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEec
Q 001638 553 EPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDI 632 (1039)
Q Consensus 553 ~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l 632 (1039)
+||++++|+|++.++ ++ .+.||++|.++++|+. +|...+. .+.+.+++++++|+|+++++
T Consensus 368 ~pF~~~~k~~gv~~~----g~--~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~---- 427 (673)
T PRK14010 368 IPFTAETRMSGVKFT----TR--EVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL---- 427 (673)
T ss_pred eccccccceeEEEEC----CE--EEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE----
Confidence 899999999998753 22 4569999999999984 2222221 25566778999999999887
Q ss_pred CCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccC
Q 001638 633 KGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSK 712 (1039)
Q Consensus 633 ~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~ 712 (1039)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||++||+++||..
T Consensus 428 -----------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------- 482 (673)
T PRK14010 428 -----------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-------------- 482 (673)
T ss_pred -----------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce--------------
Confidence 3678999999999999999999999999999999999999999999999999975
Q ss_pred CHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCC
Q 001638 713 NPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDN 792 (1039)
Q Consensus 713 ~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~ 792 (1039)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|||+||++||+|++|||
T Consensus 483 -------------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ 547 (673)
T PRK14010 483 -------------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSN 547 (673)
T ss_pred -------------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCC
Confidence 99999999999999999999 999999999999999999999999999 999999999999999999
Q ss_pred chHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------CCCchHHHH-HHHHH-HHhhHHHHh
Q 001638 793 FTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACIT------------GSAPLTAVQ-LLWVN-MIMDTLGAL 858 (1039)
Q Consensus 793 f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~------------~~~pl~~~q-ll~vn-li~d~l~al 858 (1039)
|++|++++++||++|.|++|++.|.++.|+..++..+.+.+.. ..+|-+++- -+.+| +|.-.|..|
T Consensus 548 ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (673)
T PRK14010 548 PTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPI 627 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccchhhccccCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988776555443332 246666653 23344 344444455
Q ss_pred Hh
Q 001638 859 AL 860 (1039)
Q Consensus 859 al 860 (1039)
||
T Consensus 628 ~~ 629 (673)
T PRK14010 628 AM 629 (673)
T ss_pred Hh
Confidence 55
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2e-91 Score=839.41 Aligned_cols=581 Identities=24% Similarity=0.328 Sum_probs=464.2
Q ss_pred HHHHhhHHHHHHHHHHHHHhhccCCCC------CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEE
Q 001638 165 WEALHDLTLIILMICAAVSIGVGIPTE------GWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQ 238 (1039)
Q Consensus 165 ~~~~~~~~~~il~v~a~ls~~~~~~~~------~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ 238 (1039)
..+|+|+++++|++++++++++++... .+..+|..++.+++.+++..+++++.+++.+++.+.|.+...+..++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 468899999999999999999875421 12234444445555555555666678888888888888766556799
Q ss_pred EEeCCe-EEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCC--ceeecccEEeeCCeEE
Q 001638 239 VTRDGY-RKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDR--PFLLSGTKVQDGSGKM 315 (1039)
Q Consensus 239 ViR~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~--~~l~sGt~v~~G~~~~ 315 (1039)
|+|||+ +++|++++|++||+|.+++||+|||||++++|.. .||||+|||||.|+.|..++ +.+|+||.|.+|++++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 8999999999999999999999999999999975 99999999999999998653 3599999999999999
Q ss_pred EEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHH
Q 001638 316 LVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLL 395 (1039)
Q Consensus 316 ~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~ 395 (1039)
+|+++|.+|++||+.+++++++.++||+|..++.+...+..+.+++++..+. +.++.+ ..
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~g---------------~~-- 246 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYSG---------------GA-- 246 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHhC---------------ch--
Confidence 9999999999999999999999999999988887766554332222111111 111100 01
Q ss_pred HHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCccc
Q 001638 396 NYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAK 475 (1039)
Q Consensus 396 ~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~ 475 (1039)
..+..++++++++|||+|+.+++++...++++|+|+|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 247 ~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~- 325 (679)
T PRK01122 247 LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV- 325 (679)
T ss_pred HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-
Confidence 1467789999999999999999999999999999999999999999999999999999999999999999998753221
Q ss_pred ccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHH-hCCCcccccccccEEEEec
Q 001638 476 TIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLI-LGGDSTFHREESAIVKVEP 554 (1039)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g~~~~~~~~~~~il~~~p 554 (1039)
+++ .++..++.++... .||..+|+++++.+ .+.+ ..+..++..+.+|
T Consensus 326 ---------------~~~---~ll~~a~~~s~~s------------~hP~~~AIv~~a~~~~~~~--~~~~~~~~~~~~p 373 (679)
T PRK01122 326 ---------------TEE---ELADAAQLSSLAD------------ETPEGRSIVVLAKQRFNLR--ERDLQSLHATFVP 373 (679)
T ss_pred ---------------CHH---HHHHHHHHhcCCC------------CCchHHHHHHHHHhhcCCC--chhhccccceeEe
Confidence 111 1223333333221 26888999999876 3432 2222356778899
Q ss_pred CCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCC
Q 001638 555 FNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKG 634 (1039)
Q Consensus 555 F~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~ 634 (1039)
|++++|+|++.++ + +.++||++|.+++.|+. +|... .+++.+.+++++++|+|++++|+
T Consensus 374 F~s~~~~~gv~~~----g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~----- 432 (679)
T PRK01122 374 FSAQTRMSGVDLD----G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE----- 432 (679)
T ss_pred ecCcCceEEEEEC----C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE-----
Confidence 9999998887542 3 47899999999999964 22221 24567788899999999999993
Q ss_pred CCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCH
Q 001638 635 NHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNP 714 (1039)
Q Consensus 635 ~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~ 714 (1039)
|++++|+++++||+|||++++|++||++||+++|+||||+.||++||+++||.+
T Consensus 433 ----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------- 486 (679)
T PRK01122 433 ----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------- 486 (679)
T ss_pred ----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------
Confidence 578999999999999999999999999999999999999999999999999975
Q ss_pred HHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCch
Q 001638 715 QEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFT 794 (1039)
Q Consensus 715 ~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~ 794 (1039)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|||+||++||+|++||||+
T Consensus 487 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s 553 (679)
T PRK01122 487 -----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPT 553 (679)
T ss_pred -----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHH
Confidence 99999999999999999999 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHc---------CCCchHHHH-HHHHH-HHhhHHHHhH
Q 001638 795 TIVTVARWGRSVYINIQKFVQFQLTVNIV----ALVINFVAACIT---------GSAPLTAVQ-LLWVN-MIMDTLGALA 859 (1039)
Q Consensus 795 ~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~----~i~~~~~~~~~~---------~~~pl~~~q-ll~vn-li~d~l~ala 859 (1039)
+|+++++|||+..-.--....|++. |-+ +++.+++.+.+- ..+|-+++- -+.+| +|.-.|..||
T Consensus 554 ~Iv~av~~GR~~~~tr~~~~~f~~~-n~~~~~~~i~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (679)
T PRK01122 554 KLIEVVEIGKQLLMTRGALTTFSIA-NDVAKYFAIIPAMFAATYPQLNALNIMHLHSPQSAILSALIFNALIIVALIPLA 632 (679)
T ss_pred HHHHHHHHHHHHHhhhHhhhhhhHH-HHHHHHHHHHHHHHHhhCccccccccccCCChHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999776677888877 444 333333333321 245666553 23344 3444444555
Q ss_pred h
Q 001638 860 L 860 (1039)
Q Consensus 860 l 860 (1039)
|
T Consensus 633 ~ 633 (679)
T PRK01122 633 L 633 (679)
T ss_pred h
Confidence 5
No 19
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.6e-87 Score=803.67 Aligned_cols=546 Identities=24% Similarity=0.350 Sum_probs=451.2
Q ss_pred HHHHhhHHHHHHHHHHHHHhhccCCC--C---CCCCcccch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce
Q 001638 165 WEALHDLTLIILMICAAVSIGVGIPT--E---GWPDGVYDG---LGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLI 236 (1039)
Q Consensus 165 ~~~~~~~~~~il~v~a~ls~~~~~~~--~---~~~~~~~d~---~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~ 236 (1039)
..||+|+.+++|++++++|+++++.. . +...+||++ +.+++.+++..+++++.+++.++++++|.+...+..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 36789999999999999999987631 1 122358875 334555666677778899999999999988766667
Q ss_pred EEEEe-CCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCCc--eeecccEEeeCCe
Q 001638 237 VQVTR-DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRP--FLLSGTKVQDGSG 313 (1039)
Q Consensus 237 v~ViR-~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~--~l~sGt~v~~G~~ 313 (1039)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|+.++. .+++||.|.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 899999999999999999999999999999999996 5999999999999999987653 4999999999999
Q ss_pred EEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHH
Q 001638 314 KMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMK 393 (1039)
Q Consensus 314 ~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~ 393 (1039)
+++|+++|.+|++|++.+++++++.++||+|..++.+...+..+.+++ ++.++. ... |.. .
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~---~~~~~~----~~~--------~~~---~- 246 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLV---TATLWP----FAA--------YGG---N- 246 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH---HHHHHH----HHH--------hcC---h-
Confidence 999999999999999999999988999999988887765544322211 111111 100 110 0
Q ss_pred HHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCc
Q 001638 394 LLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNE 473 (1039)
Q Consensus 394 ~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~ 473 (1039)
...+..++++++++|||+|+...+.....+++||+++|+++|+++++|+||++|+||||||||||+|+|++++++..+.
T Consensus 247 -~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~ 325 (675)
T TIGR01497 247 -AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG 325 (675)
T ss_pred -hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC
Confidence 1135667899999999988888877777899999999999999999999999999999999999999999999875321
Q ss_pred ccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEe
Q 001638 474 AKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVE 553 (1039)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~ 553 (1039)
. +++ .++..++.++.. ..||.++|+++++.+.|.+... ..++..+..
T Consensus 326 ~----------------~~~---~ll~~aa~~~~~------------s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~ 372 (675)
T TIGR01497 326 V----------------DEK---TLADAAQLASLA------------DDTPEGKSIVILAKQLGIREDD--VQSLHATFV 372 (675)
T ss_pred C----------------cHH---HHHHHHHHhcCC------------CCCcHHHHHHHHHHHcCCCccc--cccccceEE
Confidence 1 111 122223333221 1379999999999887654332 233556789
Q ss_pred cCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecC
Q 001638 554 PFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIK 633 (1039)
Q Consensus 554 pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~ 633 (1039)
||++.+|+|++.+. + + +.++||++|.+++.|+. +|...+ +.+.+.+++++++|+|++++|+
T Consensus 373 pf~~~~~~sg~~~~--~-g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~---- 433 (675)
T TIGR01497 373 EFTAQTRMSGINLD--N-G--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE---- 433 (675)
T ss_pred EEcCCCcEEEEEEe--C-C--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE----
Confidence 99999888876543 2 3 46899999999998863 222211 3467778899999999999995
Q ss_pred CCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCC
Q 001638 634 GNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKN 713 (1039)
Q Consensus 634 ~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~ 713 (1039)
+.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++||.+
T Consensus 434 -----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~--------------- 487 (675)
T TIGR01497 434 -----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD--------------- 487 (675)
T ss_pred -----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE---------------
Confidence 358999999999999999999999999999999999999999999999999976
Q ss_pred HHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCc
Q 001638 714 PQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNF 793 (1039)
Q Consensus 714 ~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f 793 (1039)
++||++|+||.++|+.+|++ |+.|+|+|||+||+|||++|||||||| +|+++||++||++++||||
T Consensus 488 ------------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~ 553 (675)
T TIGR01497 488 ------------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDP 553 (675)
T ss_pred ------------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCH
Confidence 99999999999999999999 999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001638 794 TTIVTVARWGRSVYINIQKFVQFQLTVNIV 823 (1039)
Q Consensus 794 ~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~ 823 (1039)
++|+++++|||+++-+......|.+..++.
T Consensus 554 s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 554 TKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 999999999999999999999999987654
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-86 Score=773.56 Aligned_cols=776 Identities=22% Similarity=0.344 Sum_probs=576.0
Q ss_pred CCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHH
Q 001638 131 LPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLV 210 (1039)
Q Consensus 131 ~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv 210 (1039)
..+||+..++..|+..||.|.+..+. ++.+.++.++.-+|+...-.++.++...-. .+|.+..|++.-+.-
T Consensus 157 ~~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv~S 227 (1140)
T KOG0208|consen 157 VSNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISVYS 227 (1140)
T ss_pred ccCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHHHH
Confidence 36899999999999999999998765 789999988888888776655554443321 233334443333333
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcC-CCcccccEEEEeeCceeEeccCCCCC
Q 001638 211 VIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSI-GDQVPADGILISGYSLTIDESSLSGE 289 (1039)
Q Consensus 211 ~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~-Gd~VPaDgill~g~~l~VDES~LTGE 289 (1039)
++.+.+..-+++++.+++.+ ....|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|++ .||||+||||
T Consensus 228 i~~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTGE 304 (1140)
T KOG0208|consen 228 IVLSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTGE 304 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccCC
Confidence 34444444455555555543 2358999999999999999999999999998 899999999999976 7999999999
Q ss_pred CCccccCC------------------CCceeecccEEee------CCeEEEEEEeccchhhHHHHHHhccCCCCCCchHH
Q 001638 290 TEPVHINR------------------DRPFLLSGTKVQD------GSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQV 345 (1039)
Q Consensus 290 s~pv~k~~------------------~~~~l~sGt~v~~------G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~ 345 (1039)
|.|+.|.+ ..+++|.||++.+ |.+.+.|+.||-+|..|++.+++-.++ +++++.
T Consensus 305 SVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk--P~~fkf 382 (1140)
T KOG0208|consen 305 SVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK--PVNFKF 382 (1140)
T ss_pred cccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC--CcccHH
Confidence 99999973 2457999999985 778999999999999999999998743 344444
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHH
Q 001638 346 KLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAM 425 (1039)
Q Consensus 346 ~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~ 425 (1039)
..|.+ .+.....++|++.|+...+.+... ..++-..++.++-++.+.+|.+||.++++...++.
T Consensus 383 yrds~--~fi~~l~~ia~~gfiy~~i~l~~~--------------g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~ 446 (1140)
T KOG0208|consen 383 YRDSF--KFILFLVIIALIGFIYTAIVLNLL--------------GVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQ 446 (1140)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHhHhHHHc--------------CCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHH
Confidence 33433 222233344445554433322211 12234567789999999999999999999999999
Q ss_pred HHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccc------cCCcccc---cCCCCCHHHHH
Q 001638 426 KKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIK------SGDNEKL---LKPSVSDAVFN 496 (1039)
Q Consensus 426 ~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~~ 496 (1039)
+|+.|+|+.+-+++.+...|+++++|||||||||++.+.+..+..-....... ..+.... +...-+.....
T Consensus 447 ~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 526 (1140)
T KOG0208|consen 447 SRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMG 526 (1140)
T ss_pred HHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchH
Confidence 99999999999999999999999999999999999999998887633210000 0000000 00000000123
Q ss_pred HHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHh--------------C------CCc-----cccc----ccc
Q 001638 497 IFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLIL--------------G------GDS-----TFHR----EES 547 (1039)
Q Consensus 497 ~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~--------------g------~~~-----~~~~----~~~ 547 (1039)
.+..+++.||+-.... ....|+|.|.-+.+.-... + ++. .... +++
T Consensus 527 ~~~~a~atCHSL~~v~-----g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~ 601 (1140)
T KOG0208|consen 527 NLVAAMATCHSLTLVD-----GTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEI 601 (1140)
T ss_pred HHHHHHhhhceeEEeC-----CeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcce
Confidence 4556667777543322 1456677665555431100 0 000 0000 157
Q ss_pred cEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEE
Q 001638 548 AIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCL 627 (1039)
Q Consensus 548 ~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~ 627 (1039)
.+++.+||+|+-+||||+++.+++.+..+|+|||||.|.+.|+. + ...+.+++.++.|+.+|+|++|+
T Consensus 602 si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------~------tvP~dy~evl~~Yt~~GfRVIAl 669 (1140)
T KOG0208|consen 602 SIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------E------TVPADYQEVLKEYTHQGFRVIAL 669 (1140)
T ss_pred EEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------c------cCCccHHHHHHHHHhCCeEEEEE
Confidence 79999999999999999999998789999999999999999974 1 22356889999999999999999
Q ss_pred EEEecCCCC------CcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-
Q 001638 628 AFQDIKGNH------KAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG- 700 (1039)
Q Consensus 628 A~k~l~~~~------~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~- 700 (1039)
|+|+++... -..+..|.|++|+|++.|++++|++++.+|++|++|.||++|+||||..||..+||+||+..+.
T Consensus 670 A~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~ 749 (1140)
T KOG0208|consen 670 ASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQV 749 (1140)
T ss_pred ecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCC
Confidence 999998762 2346789999999999999999999999999999999999999999999999999999998631
Q ss_pred ------------------------------------------------------CceeeCcccccC---CHHHHHhhccc
Q 001638 701 ------------------------------------------------------GLAIEGTDFRSK---NPQEMQELIPK 723 (1039)
Q Consensus 701 ------------------------------------------------------~~vi~G~~~~~~---~~~~~~~~~~~ 723 (1039)
..+++|+.|+-+ .++.+++++.+
T Consensus 750 ~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~ 829 (1140)
T KOG0208|consen 750 KVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLK 829 (1140)
T ss_pred eEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhc
Confidence 246667776544 35678888899
Q ss_pred ceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHh
Q 001638 724 LQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWG 803 (1039)
Q Consensus 724 ~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~g 803 (1039)
..||||++|.||.++|+.||+. |..|+|+|||+||+.|||+||+||+.+. ..|.-+|.+.-.-.+.+.++++|++|
T Consensus 830 ~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk~~~I~cVp~vIrEG 905 (1140)
T KOG0208|consen 830 GTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSKTPSISCVPDVIREG 905 (1140)
T ss_pred CeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccCCCchhhHhHHHhhh
Confidence 9999999999999999999999 9999999999999999999999998872 23666788888878999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCc
Q 001638 804 RSVYINIQKFVQFQLTVNIVALVINFVAACIT--GSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHF 881 (1039)
Q Consensus 804 R~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~--~~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~l 881 (1039)
|+..-.--..++|...|.++ +|++.++. -..-++..|.|++.++..+..|++++.-+|.+.+-+.|| +..+
T Consensus 906 RaALVTSf~~FkYMalYs~i----qFisv~~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L 978 (1140)
T KOG0208|consen 906 RAALVTSFACFKYMALYSAI----QFISVVFLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNL 978 (1140)
T ss_pred hhhhhhhHHHHHHHHHHHHH----HHHhhheeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---Cccc
Confidence 99998877777777666554 45544433 457889999999999999999999998888888888777 4468
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhc--ccccccCCC----CccchhhHHHHHHHHHHHHHHHHHhcccccccccc-cc
Q 001638 882 ITVTMWRNIIGQSIYQIIVLGVLTFCG--KKILKLSGP----NATLILNTFIFNSFVFCQVFNEINSRDMEKINVFR-GI 954 (1039)
Q Consensus 882 i~~~~~~~i~~~~i~q~~v~~~l~~~~--~~~~~~~~~----~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~~~~f~-~~ 954 (1039)
+++......++|.++..++.+.+.+.+ ..|+.-+.. +......|.+|..-.|.-+++.+- ..+-+.|+ .+
T Consensus 979 ~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v---~S~g~pfr~pl 1055 (1140)
T KOG0208|consen 979 LSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALV---LSKGSPFRRPL 1055 (1140)
T ss_pred cccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhhee---eccCCcccCch
Confidence 888888888888777666666555543 234432111 122334555665444444555443 33344454 67
Q ss_pred chhHHHHHHHHHH
Q 001638 955 FSSWVFIAVLVAT 967 (1039)
Q Consensus 955 ~~n~~f~~~~~~~ 967 (1039)
|+|+.|...+...
T Consensus 1056 ~~n~~f~~~i~~i 1068 (1140)
T KOG0208|consen 1056 WKNVLFKVFITVI 1068 (1140)
T ss_pred hcCceeeeehhhH
Confidence 8998887554433
No 21
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-87 Score=743.06 Aligned_cols=635 Identities=25% Similarity=0.423 Sum_probs=518.2
Q ss_pred CCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcc
Q 001638 118 GGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGV 197 (1039)
Q Consensus 118 ~gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~ 197 (1039)
+.++.+-+.|..... ||+++|+++|+++||.|++.+++...+.+|+ .-+.+|..+..-.+|++.+++.- ..|.+..|
T Consensus 21 ~p~eeVfeeL~~t~~-GLt~~E~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~Lan-g~~~~~DW 97 (942)
T KOG0205|consen 21 IPIEEVFEELLCTRE-GLTSDEVEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGLAN-GGGRPPDW 97 (942)
T ss_pred CchhhhHHHHhcCCC-CCchHHHHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHHhc-CCCCCcch
Confidence 577888877776644 9999999999999999999988766666654 44567777888888887766532 24456689
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeC
Q 001638 198 YDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGY 277 (1039)
Q Consensus 198 ~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~ 277 (1039)
.|.+.|...+++...++.+++|+.-.....|.+.. ..+.+|+|||+|.++.+++||||||+.++.||+|||||++++|+
T Consensus 98 ~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~L-A~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD 176 (942)
T KOG0205|consen 98 QDFVGICCLLLINSTISFIEENNAGNAAAALMAGL-APKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD 176 (942)
T ss_pred hhhhhhheeeeecceeeeeeccccchHHHHHHhcc-CcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCC
Confidence 99999888888888888888888888777777654 45899999999999999999999999999999999999999999
Q ss_pred ceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHH
Q 001638 278 SLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKI 357 (1039)
Q Consensus 278 ~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i 357 (1039)
-|+||+|.|||||.|+.|++++. +||||.|.+|++.|+|++||.+|..||-..++.. ......+|+-++.+.+++...
T Consensus 177 ~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~s 254 (942)
T KOG0205|consen 177 PLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICS 254 (942)
T ss_pred ccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHH
Confidence 99999999999999999999888 9999999999999999999999999999999887 677788999998888765432
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhh-hcCchhHHHHHHHHHHHHHhhccccccc
Q 001638 358 GLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKLMNDKALVR 436 (1039)
Q Consensus 358 ~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvva-vP~~Lplavtl~la~~~~~m~~~~ilvr 436 (1039)
.. +. .++.+.+.|.... ...+.....+.++++. +|.|||..++.+++.+..+++++|++++
T Consensus 255 i~-~g--~lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItk 316 (942)
T KOG0205|consen 255 IA-LG--MLIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (942)
T ss_pred HH-HH--HHHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHH
Confidence 21 11 1122222222211 1112223334455555 9999999999999999999999999999
Q ss_pred cchhhhcccceeEEEecCcCccccCceEEEE--EEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecC
Q 001638 437 HLSACETMGSASCICTDKTGTLTTNHMVVTK--LWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDK 514 (1039)
Q Consensus 437 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 514 (1039)
+++|+|.|+.++++|+|||||||.|+++|.+ +.+.-. .++.+.+-+ . +|..+. .++
T Consensus 317 rmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~---------------gv~~D~~~L--~-A~rAsr---~en- 374 (942)
T KOG0205|consen 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVK---------------GVDKDDVLL--T-AARASR---KEN- 374 (942)
T ss_pred HHHHHHHhhCceEEeecCcCceeecceecCcCcceeeec---------------CCChHHHHH--H-HHHHhh---hcC-
Confidence 9999999999999999999999999999987 311111 122222211 1 111111 111
Q ss_pred CCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhc
Q 001638 515 DGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIIN 594 (1039)
Q Consensus 515 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~ 594 (1039)
-+..|.|++.... ++.+.+..++.++..|||+..||.+..+.+++ |..+-.+|||||.|++.|..
T Consensus 375 -------~DAID~A~v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~d-G~~~r~sKGAPeqil~l~~~--- 439 (942)
T KOG0205|consen 375 -------QDAIDAAIVGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPD-GNWHRVSKGAPEQILKLCNE--- 439 (942)
T ss_pred -------hhhHHHHHHHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCC-CCEEEecCCChHHHHHHhhc---
Confidence 2568888876533 35778899999999999999999999999988 99999999999999999973
Q ss_pred cCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCC
Q 001638 595 ADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGI 674 (1039)
Q Consensus 595 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi 674 (1039)
+.+.++++.+.+++||++|+|.+++||+..++... +.......|+|+.-+-||+|.+..++|++...-|+
T Consensus 440 --------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~--~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv 509 (942)
T KOG0205|consen 440 --------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK--ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGV 509 (942)
T ss_pred --------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc--cCCCCCcccccccccCCCCccchHHHHHHHHhccc
Confidence 34566789999999999999999999998776432 23456678999999999999999999999999999
Q ss_pred EEEEECCCCHHHHHHHHHHcCCCCC--CCceeeCccc-ccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEE
Q 001638 675 TVRMVTGDNIHTAKAIAKECGILTD--GGLAIEGTDF-RSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVA 751 (1039)
Q Consensus 675 ~v~m~TGD~~~ta~~iA~~~GI~~~--~~~vi~G~~~-~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~ 751 (1039)
+|.|+|||...-++..++++|+-++ ++..+-|.+- .++...++++.+.+..-||.+.|++|+++|+.||++ |+.++
T Consensus 510 ~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~hi~g 588 (942)
T KOG0205|consen 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-KHIVG 588 (942)
T ss_pred eeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-Cceec
Confidence 9999999999999999999998663 1112222221 223335677777888889999999999999999999 99999
Q ss_pred EEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 001638 752 VTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVAL 825 (1039)
Q Consensus 752 ~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i 825 (1039)
|+|||+||+|+||.||+|||+. .+||+|+.+||+|++...++.|+.++..+|.+|.+++.+..|.++..+-.+
T Consensus 589 mtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 589 MTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred ccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999999999999999887665543
No 22
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3.4e-86 Score=810.34 Aligned_cols=838 Identities=23% Similarity=0.311 Sum_probs=626.3
Q ss_pred HHhhcCCCccCCCCCCcHH----HHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHH
Q 001638 143 RQNVYGFNRYAEKPARSFW----MFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSD 218 (1039)
Q Consensus 143 r~~~~G~N~~~~~~~~s~~----~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~ 218 (1039)
++..|-.|++...+ ++++ +.+++||++..++++++.+++++++ +.+. ++ .+.++++++|+.+++++|
T Consensus 28 ~~~~~~~N~i~TtK-Yt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~----~~---~~~~~pl~~vl~~t~iKd 98 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTK-YTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPF----NP---YTTLVPLLFVLGITAIKD 98 (1151)
T ss_pred hhccccCCeeEEEe-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cccc----Cc---cceeeceeeeehHHHHHH
Confidence 44488889988655 4333 3579999999999999999999988 4332 22 244678889999999999
Q ss_pred HHHHHHHHHHhcccCCceEEEEeCCe-EEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc----eeEeccCCCCCCCcc
Q 001638 219 YKQSLQFKALDKEKKNLIVQVTRDGY-RKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS----LTIDESSLSGETEPV 293 (1039)
Q Consensus 219 ~~~~~~~~~l~~~~~~~~v~ViR~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDES~LTGEs~pv 293 (1039)
..++.++++.+++.|+.+++|.|++. ..+..|++|+|||+|.+..+|.+|||.++++++. |+|++++|+||++.+
T Consensus 99 ~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK 178 (1151)
T KOG0206|consen 99 AIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLK 178 (1151)
T ss_pred HHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccc
Confidence 99999999999999999999999644 8999999999999999999999999999999874 899999999999987
Q ss_pred ccC----------------------------------------------CCCceeecccEEeeCC-eEEEEEEeccchhh
Q 001638 294 HIN----------------------------------------------RDRPFLLSGTKVQDGS-GKMLVTSVGMRTEW 326 (1039)
Q Consensus 294 ~k~----------------------------------------------~~~~~l~sGt~v~~G~-~~~~V~~vG~~T~~ 326 (1039)
.|. ..+++++.|+++.+.. +.+.|+.+|++|
T Consensus 179 ~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt-- 256 (1151)
T KOG0206|consen 179 VKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT-- 256 (1151)
T ss_pred eeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc--
Confidence 664 0123578888888754 789999999999
Q ss_pred HHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchh---hhHHHHHHHHHHHH
Q 001638 327 GRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSI---DAMKLLNYFAIAVT 403 (1039)
Q Consensus 327 gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~---~~~~~~~~~~~ai~ 403 (1039)
|++.+...+..+++++++.+|.....+..+.++++++..+...+ ............|+.. ........|..++.
T Consensus 257 -K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~i 333 (1151)
T KOG0206|consen 257 -KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAI--WTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFII 333 (1151)
T ss_pred -hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhhe--eeeecccccCchhhhcCchHHHHHHHHHHHHHh
Confidence 77888878888999999999887655544433333322222111 1111101111223222 11233455667777
Q ss_pred HHHhhhcCchhHHHHHHHHHHHHHhh----------ccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCc
Q 001638 404 IVVVAVPEGLPLAVTLSLAFAMKKLM----------NDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNE 473 (1039)
Q Consensus 404 ilvvavP~~Lplavtl~la~~~~~m~----------~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~ 473 (1039)
++...+|.+|...+.+.-.+.+.-+. ...+.+|+.+..|.||++++|++|||||||+|.|++.++.++|.
T Consensus 334 l~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~ 413 (1151)
T KOG0206|consen 334 LYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGT 413 (1151)
T ss_pred hhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCc
Confidence 88889999999988888777664332 34678999999999999999999999999999999999999987
Q ss_pred ccccccCCcc------c---------------------ccCC-CCCHHHHHHHHHHHHhccCCceeecCC--CCccccCC
Q 001638 474 AKTIKSGDNE------K---------------------LLKP-SVSDAVFNIFLQSIFQNTGSEVVKDKD--GRTNILGT 523 (1039)
Q Consensus 474 ~~~~~~~~~~------~---------------------~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~g~ 523 (1039)
.|.....+.. . .... .........+..++++|++..+..+.+ ...+...|
T Consensus 414 ~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~S 493 (1151)
T KOG0206|consen 414 SYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAES 493 (1151)
T ss_pred ccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCC
Confidence 7643321100 0 0000 012233445667778888876655333 24588899
Q ss_pred chHHHHHHHHHHhCCCcccc------------cccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhh
Q 001638 524 PTERAILEFGLILGGDSTFH------------REESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDK 591 (1039)
Q Consensus 524 p~e~All~~a~~~g~~~~~~------------~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~ 591 (1039)
|+|.|+++.|+.+|..+... .+.|+++++++|+|.||||||+|+.++ |++.+|||||+..|.++++.
T Consensus 494 PDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~-g~i~LycKGADsvI~erL~~ 572 (1151)
T KOG0206|consen 494 PDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPD-GRILLYCKGADSVIFERLSK 572 (1151)
T ss_pred CcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCC-CcEEEEEcCcchhhHhhhhh
Confidence 99999999999999876432 357999999999999999999999998 89999999999999999985
Q ss_pred hhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCc-----------------------CCCCCCCcEe
Q 001638 592 IINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKA-----------------------ESIPENNYTL 648 (1039)
Q Consensus 592 ~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~-----------------------~~~~e~~l~~ 648 (1039)
-.++.+++..+++++||.+||||||+|||++++++.+ .+.+|+||++
T Consensus 573 ----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~L 642 (1151)
T KOG0206|consen 573 ----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLIL 642 (1151)
T ss_pred ----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchh
Confidence 1345667788899999999999999999999876511 1467999999
Q ss_pred eeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC----------------------------
Q 001638 649 IAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG---------------------------- 700 (1039)
Q Consensus 649 lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~---------------------------- 700 (1039)
+|.+++||++++||+++|+.|++||||+||+|||..+||.+||..|++..++
T Consensus 643 LGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 643 LGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLL 722 (1151)
T ss_pred hcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998742
Q ss_pred -------------------CceeeCcccccCCHHH----HHhhc--ccceEEEecChhhHHHHHHHHhhcCCCEEEEEcC
Q 001638 701 -------------------GLAIEGTDFRSKNPQE----MQELI--PKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGN 755 (1039)
Q Consensus 701 -------------------~~vi~G~~~~~~~~~~----~~~~~--~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GD 755 (1039)
.++++|+.+....+++ +.++. ++..++||+||.||..+|+..++..+.+++++||
T Consensus 723 ~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGD 802 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGD 802 (1151)
T ss_pred HhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeC
Confidence 2456666655443332 22332 4557999999999999999998776899999999
Q ss_pred CccCHHHhhhCCcceeecCCCcHH--HHhccCEEeecCCchHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 756 GTNDAPALHEADIGLAMGIAGTEV--AKENADVIIMDDNFTTIVTV-ARWGRSVYINIQKFVQFQLTVNIVALVINFVAA 832 (1039)
Q Consensus 756 G~ND~~aL~~AdVGIamgi~gt~~--ak~~aDivl~dd~f~~i~~~-i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~ 832 (1039)
|.||.+|+++||||| ||+|.|. |..+||+.+.+ |.-+-++ +.|||+.|.|+.+++.|.+++|+...++.|++.
T Consensus 803 GANDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~ 878 (1151)
T KOG0206|consen 803 GANDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQ 878 (1151)
T ss_pred CCccchheeeCCcCe--eeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999 6677775 88999999997 7778876 588999999999999999999999999999999
Q ss_pred HHcCC---CchHHHHHHHHHHHhhHHHHhHhcc---CCCCccccCCCCC---CCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 001638 833 CITGS---APLTAVQLLWVNMIMDTLGALALAT---EPPHEGLMQRPPI---GRNVHFITVTMWRNIIGQSIYQIIVLGV 903 (1039)
Q Consensus 833 ~~~~~---~pl~~~qll~vnli~d~l~alala~---e~p~~~lm~~~P~---~~~~~li~~~~~~~i~~~~i~q~~v~~~ 903 (1039)
+++|+ ..+..+++..+|++++++|.++++. |.+.+.+|+.|-. +++..+++...++.++..++||.+++++
T Consensus 879 f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff 958 (1151)
T KOG0206|consen 879 FFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFF 958 (1151)
T ss_pred hcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeee
Confidence 98864 5678899999999999999999983 4444445555432 4455566655555567789999998887
Q ss_pred HHHhccc--ccccCCCCcc-chhhHHHHHHHHHHHHH-HHHHhccccccccccccchhHHH-HHHHHHHHHHHHHHHh--
Q 001638 904 LTFCGKK--ILKLSGPNAT-LILNTFIFNSFVFCQVF-NEINSRDMEKINVFRGIFSSWVF-IAVLVATVGFQVIIVE-- 976 (1039)
Q Consensus 904 l~~~~~~--~~~~~~~~~~-~~~~T~~f~~~v~~qv~-n~~~~r~~~~~~~f~~~~~n~~f-~~~~~~~~~~q~~~v~-- 976 (1039)
+.+.... .+..+|.+.+ ....+.+|++.|+.-.+ -.+....|+ |-|+++ |+.+++-+++.+++-.
T Consensus 959 ~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT--------~i~~i~i~gSi~~~f~f~~iy~~~~ 1030 (1151)
T KOG0206|consen 959 LPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWT--------WINHIVIWGSILLWFVFLFIYSELT 1030 (1151)
T ss_pred eeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehhee--------HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 6554321 2222333221 22233344443331100 111111111 122222 2333333333333211
Q ss_pred --------hhhhhhcccCCChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 977 --------LLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 977 --------~~~~~~~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
+.+ ++...--++.+|+.+++..+++++++++.|.+....+|
T Consensus 1031 ~~~~~~~~~~~-~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~P 1079 (1151)
T KOG0206|consen 1031 PAISTPDPFYG-VAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFP 1079 (1151)
T ss_pred cccCCCccHHH-HHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCC
Confidence 111 12222357889999999999999999999999988777
No 23
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-83 Score=714.71 Aligned_cols=805 Identities=22% Similarity=0.305 Sum_probs=609.4
Q ss_pred HHhhcCCCccCCCCCC--cHHH-HHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 001638 143 RQNVYGFNRYAEKPAR--SFWM-FVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDY 219 (1039)
Q Consensus 143 r~~~~G~N~~~~~~~~--s~~~-~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~ 219 (1039)
++++|-+|.+...+-. +|.. .+++||+.+.+.++++.+..+++..+.. |.. .+.+.++.++.+++.+.+.
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g~l------~ty~~pl~fvl~itl~kea 147 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-GYL------STYWGPLGFVLTITLIKEA 147 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-cch------hhhhHHHHHHHHHHHHHHH
Confidence 5557888887765432 4444 4589999999999998888887765432 222 2234455666667777777
Q ss_pred HHHHHHHHHhcccCCceEEEE-eCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeC----ceeEeccCCCCCCCccc
Q 001638 220 KQSLQFKALDKEKKNLIVQVT-RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGY----SLTIDESSLSGETEPVH 294 (1039)
Q Consensus 220 ~~~~~~~~l~~~~~~~~v~Vi-R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~----~l~VDES~LTGEs~pv~ 294 (1039)
.++.+++.-++..|+...+++ |+|-... ++++|+|||+|.++.+++||||.+++.++ ++.|-+-.|+||++.+-
T Consensus 148 vdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 148 VDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 777777777777777767666 7776555 99999999999999999999999999864 37899999999998653
Q ss_pred cC----------------------------------------------CCCceeecccEEeeCCeEEEEEEeccchhhHH
Q 001638 295 IN----------------------------------------------RDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGR 328 (1039)
Q Consensus 295 k~----------------------------------------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gk 328 (1039)
|- .-++.++++|.|.+|.+.++|++||.+| +
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt---R 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT---R 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---H
Confidence 31 1145799999999999999999999999 5
Q ss_pred HHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhh
Q 001638 329 LMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVA 408 (1039)
Q Consensus 329 i~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvva 408 (1039)
-+.+...++.+-.-++..+|.+.+++....++++++.... . +-...|+ .+++..+.++-..
T Consensus 304 svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~------~-----g~~~~wy--------i~~~RfllLFS~I 364 (1051)
T KOG0210|consen 304 SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM------K-----GFGSDWY--------IYIIRFLLLFSSI 364 (1051)
T ss_pred HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh------h-----cCCCchH--------HHHHHHHHHHhhh
Confidence 5556666677777888999999988776655554432211 1 1124454 3444555556666
Q ss_pred hcCchhHHHHHHHHHHHHHhhcc----ccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCccccccc-----
Q 001638 409 VPEGLPLAVTLSLAFAMKKLMND----KALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKS----- 479 (1039)
Q Consensus 409 vP~~Lplavtl~la~~~~~m~~~----~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~----- 479 (1039)
+|..|-.-+.++...-.+.+.+| |.+||.....|+||++.++.+|||||||+|+|.+++++.+.-.++.+.
T Consensus 365 IPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~ 444 (1051)
T KOG0210|consen 365 IPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVS 444 (1051)
T ss_pred ceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHH
Confidence 89999999999988888888876 678999999999999999999999999999999999998754432110
Q ss_pred ---------CCcc-----cccCCCCCHHHHHHHHHHHHhccCCceeecCCC-CccccCCchHHHHHHHHHHhCCCcccc-
Q 001638 480 ---------GDNE-----KLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDG-RTNILGTPTERAILEFGLILGGDSTFH- 543 (1039)
Q Consensus 480 ---------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~g~~~~~~- 543 (1039)
++.. .......+..+ .-+.++++.||+..++.+++| ..++..||+|.||++|-+..|......
T Consensus 445 ~~i~s~~~~~~~~~~~~~~~~k~~~s~rv-~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd 523 (1051)
T KOG0210|consen 445 QHIQSLYTPGRNKGKGALSRVKKDMSARV-RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRD 523 (1051)
T ss_pred HHHHHhhCCCcccccccchhhcCcccHHH-HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecc
Confidence 0000 00011223333 334566777888777766654 568999999999999998888654332
Q ss_pred ------------cccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHH
Q 001638 544 ------------REESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLT 611 (1039)
Q Consensus 544 ------------~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 611 (1039)
..+|+|++++||+|+.|||+++|+++.++++..|.|||+..+-..-. .-+.++
T Consensus 524 ~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq---------------~NdWle 588 (1051)
T KOG0210|consen 524 RHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ---------------YNDWLE 588 (1051)
T ss_pred cceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc---------------cchhhh
Confidence 23799999999999999999999999779999999999877643321 113567
Q ss_pred HHHHHHhHccCcEEEEEEEecCCCCCcC------------------------CCCCCCcEeeeeecccCCCCccHHHHHH
Q 001638 612 NVINGFSSEALRTLCLAFQDIKGNHKAE------------------------SIPENNYTLIAVVGIKDPVRPGVREAVE 667 (1039)
Q Consensus 612 ~~i~~~a~~glr~l~~A~k~l~~~~~~~------------------------~~~e~~l~~lG~v~i~D~lR~~v~~aI~ 667 (1039)
+...+||.+||||+.+|.|.+++++.+. ..+|+|+.++|+.|.||+++++|+.+++
T Consensus 589 EE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 589 EECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 7788999999999999999998764110 2568999999999999999999999999
Q ss_pred HHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC----------------------------CCceeeCccccc---CCHHH
Q 001638 668 TCLAAGITVRMVTGDNIHTAKAIAKECGILTD----------------------------GGLAIEGTDFRS---KNPQE 716 (1039)
Q Consensus 668 ~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~----------------------------~~~vi~G~~~~~---~~~~~ 716 (1039)
.||+|||+|||+|||..+||..||+..++.+. ..++++|+.+.- .-++|
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~E 748 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDE 748 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHH
Confidence 99999999999999999999999999999863 247888887653 34577
Q ss_pred HHhhccc--ceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHH--HHhccCEEeecCC
Q 001638 717 MQELIPK--LQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEV--AKENADVIIMDDN 792 (1039)
Q Consensus 717 ~~~~~~~--~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~--ak~~aDivl~dd~ 792 (1039)
+.++..+ ..|+|||+|+||+++++.+|++.|..|+++|||.||+.|+++||+|| ||.|.|. |.-+||+.|.+
T Consensus 749 f~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItq-- 824 (1051)
T KOG0210|consen 749 FIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQ-- 824 (1051)
T ss_pred HHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHH--
Confidence 7776654 46999999999999999999988999999999999999999999999 6667764 78889999986
Q ss_pred chHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHH---HHHHHHHhhHHHHhHhccCCC-Cc
Q 001638 793 FTTIVTVA-RWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQ---LLWVNMIMDTLGALALATEPP-HE 867 (1039)
Q Consensus 793 f~~i~~~i-~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~q---ll~vnli~d~l~alala~e~p-~~ 867 (1039)
|+.+-+++ -+||+.|+|-.+.-||.+...++...++.++++.+.+.|..-.| |.-+..+++.+|.++|..+.- ++
T Consensus 825 F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~ 904 (1051)
T KOG0210|consen 825 FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSE 904 (1051)
T ss_pred HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccH
Confidence 99999986 45999999999999999999999999999999888888877776 455788899999999876432 22
Q ss_pred c-ccCCCC------CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhhHHHHHHHHHHHHHH-H
Q 001638 868 G-LMQRPP------IGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGPNATLILNTFIFNSFVFCQVFN-E 939 (1039)
Q Consensus 868 ~-lm~~~P------~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~qv~n-~ 939 (1039)
. .+..|. .+|.-+.-+... |...++||..++.+..+.- +. +.....-++.|.++++-.+.. +
T Consensus 905 ~~a~~yPELYKeL~kgr~lSYKtF~i---wvLISiYQG~vim~g~~~l---~~----~ef~~ivaisFtaLi~tELiMVa 974 (1051)
T KOG0210|consen 905 SLAVLYPELYKELTKGRSLSYKTFFI---WVLISIYQGSVIMYGALLL---FD----TEFIHIVAISFTALILTELIMVA 974 (1051)
T ss_pred HHHhhhHHHHHHHhcCCccchhhhhh---hhhHHHHcccHHHHHHHHH---hh----hhheEeeeeeeHHHHHHHHHHHh
Confidence 2 233332 233333333333 3445899988876643221 11 111223455676666654321 2
Q ss_pred HHhccccccccccccchhHHHHHHHHHHHHHHHHHHhhhhhhhcccC-CChHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Q 001638 940 INSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVP-LNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 940 ~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~v~~~~~~~~~~~-l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
+..++ .+|+.+..-++++.++++.+.|++.+|.... ++|.+.+...++.+++.++.++.|.+..+..|
T Consensus 975 Ltv~t-----------w~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sP 1043 (1051)
T KOG0210|consen 975 LTVRT-----------WHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSP 1043 (1051)
T ss_pred hhhhh-----------hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 22232 2356667777888888888899988877543 56777777778888899999999999998877
No 24
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-80 Score=738.96 Aligned_cols=545 Identities=28% Similarity=0.385 Sum_probs=430.7
Q ss_pred CcHHHHHHHHHhhHH---HHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--c
Q 001638 158 RSFWMFVWEALHDLT---LIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKE--K 232 (1039)
Q Consensus 158 ~s~~~~~~~~~~~~~---~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~--~ 232 (1039)
.+|++-.|+.++... ..+..++++.+++++....-+. .||+..++++.++++. ..+.++-+.+..+.+.+. .
T Consensus 132 ~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-~yf~~aa~ii~l~~~G--~~LE~~a~~ra~~ai~~L~~l 208 (713)
T COG2217 132 WPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-VYFEEAAMLIFLFLLG--RYLEARAKGRARRAIRALLDL 208 (713)
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcc
Confidence 344555566666542 1222233333344443211111 5677766665444432 223333333333333332 3
Q ss_pred CCceEEEEe-CCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeC
Q 001638 233 KNLIVQVTR-DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDG 311 (1039)
Q Consensus 233 ~~~~v~ViR-~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G 311 (1039)
.+..+++++ ||++++|+++||++||+|.++|||+||+||++++|++ .||||++||||.|+.|..++. +++||.+.+|
T Consensus 209 ~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G 286 (713)
T COG2217 209 APKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDG 286 (713)
T ss_pred CCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCc
Confidence 456776666 5669999999999999999999999999999999999 899999999999999998877 9999999999
Q ss_pred CeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhh
Q 001638 312 SGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDA 391 (1039)
Q Consensus 312 ~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~ 391 (1039)
..++.|+++|.+|.+++|.+++++++..++|.|+..|+++.++.+..+++++++|++|.+. . .
T Consensus 287 ~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~---~--------~------ 349 (713)
T COG2217 287 SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLF---G--------G------ 349 (713)
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHh---c--------C------
Confidence 9999999999999999999999999999999999999999999999999999988865321 1 0
Q ss_pred HHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEc
Q 001638 392 MKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWIC 471 (1039)
Q Consensus 392 ~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 471 (1039)
..+..++..++++++++|||+|.+++|+++..++.+.+++|+|+|+.+++|+++++|+++||||||||+|+|+|+++...
T Consensus 350 ~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~ 429 (713)
T COG2217 350 GDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVAL 429 (713)
T ss_pred CcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecC
Confidence 12335788999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEE
Q 001638 472 NEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVK 551 (1039)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~ 551 (1039)
+.. .++.+. .+.+.. ..+.||..+|+++++...+.... +...
T Consensus 430 ~~~----------------e~~~L~---laAalE-------------~~S~HPiA~AIv~~a~~~~~~~~------~~~~ 471 (713)
T COG2217 430 DGD----------------EDELLA---LAAALE-------------QHSEHPLAKAIVKAAAERGLPDV------EDFE 471 (713)
T ss_pred CCC----------------HHHHHH---HHHHHH-------------hcCCChHHHHHHHHHHhcCCCCc------ccee
Confidence 320 122222 222221 23459999999998887762111 1122
Q ss_pred EecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEe
Q 001638 552 VEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQD 631 (1039)
Q Consensus 552 ~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~ 631 (1039)
.+| . .++--+.+ | ..+.-|.+..+.+ .+.. .+. ..+..+.+.++|..++.++
T Consensus 472 ~i~----G--~Gv~~~v~--g--~~v~vG~~~~~~~--------~~~~--~~~-----~~~~~~~~~~~G~t~v~va--- 523 (713)
T COG2217 472 EIP----G--RGVEAEVD--G--ERVLVGNARLLGE--------EGID--LPL-----LSERIEALESEGKTVVFVA--- 523 (713)
T ss_pred eec----c--CcEEEEEC--C--EEEEEcCHHHHhh--------cCCC--ccc-----hhhhHHHHHhcCCeEEEEE---
Confidence 222 1 12211112 2 2344577655432 1111 111 3455677888898888887
Q ss_pred cCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCccccc
Q 001638 632 IKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRS 711 (1039)
Q Consensus 632 l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~ 711 (1039)
.|..++|+++++|++||+++++|++||+.|+++.|+||||..+|++||+++||..
T Consensus 524 ------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------- 578 (713)
T COG2217 524 ------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------- 578 (713)
T ss_pred ------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-------------
Confidence 4558999999999999999999999999999999999999999999999999976
Q ss_pred CCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecC
Q 001638 712 KNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDD 791 (1039)
Q Consensus 712 ~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd 791 (1039)
++|.+.|+||.++|+.||++ |++|+|+|||+||+|||++|||||||| +|+|+|+|+||++|++|
T Consensus 579 --------------v~AellPedK~~~V~~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~ 642 (713)
T COG2217 579 --------------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRD 642 (713)
T ss_pred --------------heccCCcHHHHHHHHHHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecC
Confidence 99999999999999999998 999999999999999999999999999 79999999999999999
Q ss_pred CchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 792 NFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVA 831 (1039)
Q Consensus 792 ~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~ 831 (1039)
++..++.+++.+|+++++|++|+.|.|.||+++++++..+
T Consensus 643 dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 643 DLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988766
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.3e-76 Score=731.94 Aligned_cols=520 Identities=25% Similarity=0.348 Sum_probs=425.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEee
Q 001638 197 VYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISG 276 (1039)
Q Consensus 197 ~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g 276 (1039)
|.++..+++.+++.-.+..+.+++.++..++|.+ ..+..++|+|||++++|++++|+|||+|.+++||+|||||++++|
T Consensus 206 ~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 206 TAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 5555544444444444444444444445555554 346689999999999999999999999999999999999999999
Q ss_pred CceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHH
Q 001638 277 YSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGK 356 (1039)
Q Consensus 277 ~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~ 356 (1039)
+. .||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+|.+++++++.+++|+|+.+|+++.++++
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~ 362 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTP 362 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Confidence 76 899999999999999988765 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccc
Q 001638 357 IGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVR 436 (1039)
Q Consensus 357 i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr 436 (1039)
+++++++++|+++.+.+ + . .+...+..++++++++|||+|.+++|+++..++.+++|+|+++|
T Consensus 363 ~v~~~a~~~~~~~~~~~--~-------~--------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik 425 (741)
T PRK11033 363 AIMLVALLVILVPPLLF--A-------A--------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIK 425 (741)
T ss_pred HHHHHHHHHHHHHHHHc--c-------C--------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEc
Confidence 99999998888753211 0 1 12345778899999999999999999999999999999999999
Q ss_pred cchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCC
Q 001638 437 HLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDG 516 (1039)
Q Consensus 437 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 516 (1039)
+++++|+|+++|+||||||||||+|+|+|++++..+.. +++ +++..+....
T Consensus 426 ~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~--~~l~~aa~~e----------- 476 (741)
T PRK11033 426 GGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI----------------SES--ELLALAAAVE----------- 476 (741)
T ss_pred CcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------CHH--HHHHHHHHHh-----------
Confidence 99999999999999999999999999999998753321 111 1111111111
Q ss_pred CccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEE-EEEc-CCCCeEEEEEeCcHHHHHhhhhhhhc
Q 001638 517 RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSV-LVSL-PNNGGFRVFCKGASEIILNMCDKIIN 594 (1039)
Q Consensus 517 ~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsv-vv~~-~~~~~~~~~~KGa~e~il~~c~~~~~ 594 (1039)
..+.||.++|+++++.+.+.+ +||.++++.+.- -++. -+ |.. +.-|+++.+.+
T Consensus 477 --~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~-g~~--~~ig~~~~~~~------- 531 (741)
T PRK11033 477 --QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVN-GER--VLICAPGKLPP------- 531 (741)
T ss_pred --cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEEC-CEE--EEEecchhhhh-------
Confidence 123599999999998876543 466666666531 1221 11 222 23477765532
Q ss_pred cCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCC
Q 001638 595 ADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGI 674 (1039)
Q Consensus 595 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi 674 (1039)
++ +.+.+.++.+..+|++++++|+ |.+++|+++++|++|||++++|++|+++|+
T Consensus 532 -------~~----~~~~~~~~~~~~~g~~~v~va~---------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi 585 (741)
T PRK11033 532 -------LA----DAFAGQINELESAGKTVVLVLR---------------NDDVLGLIALQDTLRADARQAISELKALGI 585 (741)
T ss_pred -------cc----HHHHHHHHHHHhCCCEEEEEEE---------------CCEEEEEEEEecCCchhHHHHHHHHHHCCC
Confidence 12 2344456788999999999994 568999999999999999999999999999
Q ss_pred EEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEc
Q 001638 675 TVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTG 754 (1039)
Q Consensus 675 ~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~G 754 (1039)
+++|+|||+..+|+++|+++||. .+++.+|+||..+|+.+|+. +.|+|+|
T Consensus 586 ~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~mvG 635 (741)
T PRK11033 586 KGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLAMVG 635 (741)
T ss_pred EEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEEEEE
Confidence 99999999999999999999994 56788999999999999965 5799999
Q ss_pred CCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 755 NGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACI 834 (1039)
Q Consensus 755 DG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~ 834 (1039)
||.||+|||++|||||||| +|+++++++||+++++|++..++.++++||++++||++|+.|.+.+|++++++++++.+
T Consensus 636 DgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~- 713 (741)
T PRK11033 636 DGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGIT- 713 (741)
T ss_pred CCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Confidence 9999999999999999999 89999999999999999999999999999999999999999999999999888765421
Q ss_pred cCCCchHHHHHHHHHHHhhHHHHh
Q 001638 835 TGSAPLTAVQLLWVNMIMDTLGAL 858 (1039)
Q Consensus 835 ~~~~pl~~~qll~vnli~d~l~al 858 (1039)
| +|+..+.+.+.++
T Consensus 714 ----~------~~~a~~~~~~ss~ 727 (741)
T PRK11033 714 ----G------LWLAVLADSGATA 727 (741)
T ss_pred ----H------HHHHHHHHcChHH
Confidence 1 4666666655444
No 26
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2e-76 Score=707.56 Aligned_cols=492 Identities=38% Similarity=0.590 Sum_probs=430.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-cCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEecc
Q 001638 206 SILLVVIVTAVSDYKQSLQFKALDKE-KKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDES 284 (1039)
Q Consensus 206 ~lllv~~v~a~~~~~~~~~~~~l~~~-~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES 284 (1039)
++++..++..+.+++.++..+++.+. .++..++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 34556677778888888888888763 567799999999 999999999999999999999999999999995 589999
Q ss_pred CCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHH-HHHHHHHHHHHH
Q 001638 285 SLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVA-TVIGKIGLVFAV 363 (1039)
Q Consensus 285 ~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a-~~i~~i~l~~a~ 363 (1039)
+|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|+|++.++++ .++..+.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987765 99999999999999999999999999999999887777899999999999 777777777777
Q ss_pred HHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhc
Q 001638 364 LTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACET 443 (1039)
Q Consensus 364 l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~ 443 (1039)
++++++...+. . ...+...+..++++++++|||+||++++++++.+..+|+++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~------------~---~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~ 226 (499)
T TIGR01494 162 AVFLFWAIGLW------------D---PNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEE 226 (499)
T ss_pred HHHHHHHHHHc------------c---cccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhh
Confidence 66665432210 0 00234678889999999999999999999999999999999999999999999
Q ss_pred ccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCC
Q 001638 444 MGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGT 523 (1039)
Q Consensus 444 Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 523 (1039)
||+++++|||||||||+|+|+|.+++..+. .+.++|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~h 262 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGH 262 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCC
Confidence 999999999999999999999999875321 023469
Q ss_pred chHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCC
Q 001638 524 PTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPIS 603 (1039)
Q Consensus 524 p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~ 603 (1039)
|.|.|+++++... .++..||++.+|+|+++++.++ + .++||+++.+++.|.+
T Consensus 263 p~~~ai~~~~~~~------------~~~~~~f~~~~~~~~~~~~~~~-~---~~~~G~~~~i~~~~~~------------ 314 (499)
T TIGR01494 263 PDERALVKSAKWK------------ILNVFEFSSVRKRMSVIVRGPD-G---TYVKGAPEFVLSRVKD------------ 314 (499)
T ss_pred hHHHHHHHHhhhc------------CcceeccCCCCceEEEEEecCC-c---EEEeCCHHHHHHhhHH------------
Confidence 9999999988642 1357899999999999998643 3 4789999999998863
Q ss_pred HHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCC
Q 001638 604 EEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDN 683 (1039)
Q Consensus 604 ~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~ 683 (1039)
+.+.++.++.+|+|++++|++. +++|+++++|++|++++++|+.|+++|++++|+|||+
T Consensus 315 ------~~~~~~~~~~~g~~~~~~a~~~---------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~ 373 (499)
T TIGR01494 315 ------LEEKVKELAQSGLRVLAVASKE---------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDN 373 (499)
T ss_pred ------HHHHHHHHHhCCCEEEEEEECC---------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCC
Confidence 1223446788999999999642 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHh
Q 001638 684 IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPAL 763 (1039)
Q Consensus 684 ~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL 763 (1039)
..+|..+|+++|| +++++|++|.++|+.+|+. |+.|+|+|||.||+|||
T Consensus 374 ~~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al 422 (499)
T TIGR01494 374 VLTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPAL 422 (499)
T ss_pred HHHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHH
Confidence 9999999999996 5789999999999999998 89999999999999999
Q ss_pred hhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHH
Q 001638 764 HEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAV 843 (1039)
Q Consensus 764 ~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~ 843 (1039)
++|||||||| |+++||++|++|++..++.++++||+++++|++++.|.+++|++.+++++++.+
T Consensus 423 ~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~---------- 486 (499)
T TIGR01494 423 KKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV---------- 486 (499)
T ss_pred HhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 9999999997 799999999999999999999999999999999999999999998888776442
Q ss_pred HHHHHHHHhhHHHHhH
Q 001638 844 QLLWVNMIMDTLGALA 859 (1039)
Q Consensus 844 qll~vnli~d~l~ala 859 (1039)
+|+++|+.++++
T Consensus 487 ----~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ----LNLVPPGLAALA 498 (499)
T ss_pred ----HHHHhcchhhhc
Confidence 888888877664
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.3e-74 Score=696.22 Aligned_cols=524 Identities=27% Similarity=0.382 Sum_probs=433.3
Q ss_pred HHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCC-eEEEEEcCCccc
Q 001638 177 MICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDG-YRKKLSIYDLVV 255 (1039)
Q Consensus 177 ~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G-~~~~I~~~dLvv 255 (1039)
.++++++++.+ .|.++..+++.+++..++....+++.++..+++.+ ..+..++|+||| ++++|+.++|+|
T Consensus 6 ~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 6 ALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCC
Confidence 34445555554 46666666666666666666666666666666654 345689999995 999999999999
Q ss_pred CcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhcc
Q 001638 256 GDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSE 335 (1039)
Q Consensus 256 GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~ 335 (1039)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|..++ .+|+||.+.+|+++++|+++|.+|+.|++.+.+.+
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~ 154 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEE 154 (556)
T ss_pred CCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHHH
Confidence 99999999999999999999985 89999999999999998765 49999999999999999999999999999999998
Q ss_pred CCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhH
Q 001638 336 GGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPL 415 (1039)
Q Consensus 336 ~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lpl 415 (1039)
...+++|+|+.+++++.++.++++++++++|++++.. . .+ ..+..++++++++|||+||+
T Consensus 155 ~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~---~--------~~---------~~~~~~~~vlv~~~P~al~l 214 (556)
T TIGR01525 155 AQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---G--------AL---------GALYRALAVLVVACPCALGL 214 (556)
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c--------cc---------hHHHHHHHHHhhccccchhe
Confidence 8889999999999999999999998888888765321 0 00 46778999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHH
Q 001638 416 AVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVF 495 (1039)
Q Consensus 416 avtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (1039)
++|++++.++++|.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+... . -.++.+
T Consensus 215 ~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-----~--------~~~~~l 281 (556)
T TIGR01525 215 ATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-----I--------SEEELL 281 (556)
T ss_pred hhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-----c--------cHHHHH
Confidence 999999999999999999999999999999999999999999999999999987643320 0 011222
Q ss_pred HHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEE
Q 001638 496 NIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFR 575 (1039)
Q Consensus 496 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~ 575 (1039)
.+ +.... ....||++.|+++++.+.+.+... +| +. ...++ .++.
T Consensus 282 ~~---a~~~e-------------~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~~------~~~~~-~gi~ 325 (556)
T TIGR01525 282 AL---AAALE-------------QSSSHPLARAIVRYAKKRGLELPK-----------QE--DV------EEVPG-KGVE 325 (556)
T ss_pred HH---HHHHh-------------ccCCChHHHHHHHHHHhcCCCccc-----------cc--Ce------eEecC-CeEE
Confidence 21 11111 123589999999999887654321 11 00 01123 4566
Q ss_pred EEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeeccc
Q 001638 576 VFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIK 655 (1039)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~ 655 (1039)
.++||+++..+..|+.. ..++.. ....++.++.++.+|+|++.++ .|.+++|.+.++
T Consensus 326 ~~~~g~~~~~lg~~~~~-~~~~~~-------~~~~~~~~~~~~~~g~~~~~v~---------------~~~~~~g~i~~~ 382 (556)
T TIGR01525 326 ATVDGQEEVRIGNPRLL-ELAAEP-------ISASPDLLNEGESQGKTVVFVA---------------VDGELLGVIALR 382 (556)
T ss_pred EEECCeeEEEEecHHHH-hhcCCC-------chhhHHHHHHHhhCCcEEEEEE---------------ECCEEEEEEEec
Confidence 67777767777777643 111111 1122345667889999999998 356899999999
Q ss_pred CCCCccHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 656 DPVRPGVREAVETCLAAG-ITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aG-i~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
|++|||++++++.|+++| +++.|+|||+..++.++++++|+.. +|+++.|++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~ 435 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPED 435 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHH
Confidence 999999999999999999 9999999999999999999999965 899999999
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHH
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFV 814 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i 814 (1039)
|.++++.+++. ++.|+|+|||.||++|+++||||++|| ++++.+++.||+++.+|+++.+..++++||++++||++++
T Consensus 436 K~~~v~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl 513 (556)
T TIGR01525 436 KLAIVKELQEE-GGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNL 513 (556)
T ss_pred HHHHHHHHHHc-CCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 889999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 001638 815 QFQLTVNIVALVINFVAA 832 (1039)
Q Consensus 815 ~f~l~~Ni~~i~~~~~~~ 832 (1039)
.|++++|++++++++.+.
T Consensus 514 ~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 514 AWALGYNLVAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999988776543
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-75 Score=681.86 Aligned_cols=525 Identities=24% Similarity=0.356 Sum_probs=430.5
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------cCCceEEEEeCCe-EEEEEcCCcccCcEEEEcCCCc
Q 001638 194 PDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKE------KKNLIVQVTRDGY-RKKLSIYDLVVGDIVHLSIGDQ 266 (1039)
Q Consensus 194 ~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~------~~~~~v~ViR~G~-~~~I~~~dLvvGDIV~l~~Gd~ 266 (1039)
+..+||...|++.++.+. +|.+.+...+..+. ..+.++.++.+|+ .++|+++.+++||+|.+.||++
T Consensus 337 ~~tfFdt~~MLi~fi~lg------r~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~k 410 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLG------RWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEK 410 (951)
T ss_pred cchhccccHHHHHHHHHH------HHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCc
Confidence 456888877776555433 66665554443321 3466888898886 8999999999999999999999
Q ss_pred ccccEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHH
Q 001638 267 VPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVK 346 (1039)
Q Consensus 267 VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~ 346 (1039)
||+||++++|++ +||||++|||+.||.|..+++ +.+||.+.+|...+.++.+|.+|.+++|.+++++++..++|+|+.
T Consensus 411 iPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~ 488 (951)
T KOG0207|consen 411 IPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQL 488 (951)
T ss_pred cccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHH
Confidence 999999999998 999999999999999998877 999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHH
Q 001638 347 LNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 426 (1039)
Q Consensus 347 l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~ 426 (1039)
+|+++.++++..+++++.+|++|.+.... .......| ...+..+|..+++++++||||+|.||+|++...+..
T Consensus 489 aDkia~yFvP~Vi~lS~~t~~~w~~~g~~---~~~~~~~~----~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatg 561 (951)
T KOG0207|consen 489 ADKIAGYFVPVVIVLSLATFVVWILIGKI---VFKYPRSF----FDAFSHAFQLAISVLVIACPCALGLATPTAVMVATG 561 (951)
T ss_pred HHHhhhcCCchhhHHHHHHHHHHHHHccc---cccCcchh----hHHHHHHHHhhheEEEEECchhhhcCCceEEEEEec
Confidence 99999999999999999999988654321 11111112 245677889999999999999999999999999999
Q ss_pred HhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhcc
Q 001638 427 KLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNT 506 (1039)
Q Consensus 427 ~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 506 (1039)
..+++|+|+|..+++|++.+++++.||||||||+|+++|+++....+. ++.+..-.+..+.-
T Consensus 562 vgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---------------~~~~e~l~~v~a~E--- 623 (951)
T KOG0207|consen 562 VGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---------------ISLKEALALVAAME--- 623 (951)
T ss_pred hhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc---------------ccHHHHHHHHHHHh---
Confidence 999999999999999999999999999999999999999998775542 12221111111111
Q ss_pred CCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHH
Q 001638 507 GSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIIL 586 (1039)
Q Consensus 507 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il 586 (1039)
..+.||..+|+++||+..... ...........|..+.+...+ ...+ .. .+-|.-+.+.
T Consensus 624 ------------s~SeHPig~AIv~yak~~~~~----~~~~~~~~~~~~pg~g~~~~~--~~~~-~~---i~iGN~~~~~ 681 (951)
T KOG0207|consen 624 ------------SGSEHPIGKAIVDYAKEKLVE----PNPEGVLSFEYFPGEGIYVTV--TVDG-NE---VLIGNKEWMS 681 (951)
T ss_pred ------------cCCcCchHHHHHHHHHhcccc----cCccccceeecccCCCcccce--EEee-eE---EeechHHHHH
Confidence 112489999999999977611 111122233334443333122 2222 12 3346555443
Q ss_pred hhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHH
Q 001638 587 NMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAV 666 (1039)
Q Consensus 587 ~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI 666 (1039)
.+|...+ +.+++..++....|..+.+++ -|.+++|+++++|++|||+..+|
T Consensus 682 --------r~~~~~~------~~i~~~~~~~e~~g~tvv~v~---------------vn~~l~gv~~l~D~vr~~a~~av 732 (951)
T KOG0207|consen 682 --------RNGCSIP------DDILDALTESERKGQTVVYVA---------------VNGQLVGVFALEDQVRPDAALAV 732 (951)
T ss_pred --------hcCCCCc------hhHHHhhhhHhhcCceEEEEE---------------ECCEEEEEEEeccccchhHHHHH
Confidence 2332221 236667777788999999888 46789999999999999999999
Q ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcC
Q 001638 667 ETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVF 746 (1039)
Q Consensus 667 ~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~ 746 (1039)
+.||+.|+++.|+||||..+|+++|+++||.. |+|.+.|+||.+.|+.+|++
T Consensus 733 ~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~---------------------------V~aev~P~~K~~~Ik~lq~~- 784 (951)
T KOG0207|consen 733 AELKSMGIKVVMLTGDNDAAARSVAQQVGIDN---------------------------VYAEVLPEQKAEKIKEIQKN- 784 (951)
T ss_pred HHHHhcCceEEEEcCCCHHHHHHHHHhhCcce---------------------------EEeccCchhhHHHHHHHHhc-
Confidence 99999999999999999999999999999876 99999999999999999999
Q ss_pred CCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 747 KEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALV 826 (1039)
Q Consensus 747 g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~ 826 (1039)
+++|+|+|||+||+|||.+|||||||| .|+++|.|+||+||+.+|+..++.++..+|++..|||.|+.|+++||+++++
T Consensus 785 ~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~Ip 863 (951)
T KOG0207|consen 785 GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIP 863 (951)
T ss_pred CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999999999 8899999999999999999999999999999999999999999999999998
Q ss_pred HHHHH
Q 001638 827 INFVA 831 (1039)
Q Consensus 827 ~~~~~ 831 (1039)
++...
T Consensus 864 IAagv 868 (951)
T KOG0207|consen 864 IAAGV 868 (951)
T ss_pred hheec
Confidence 87543
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=6.4e-73 Score=681.63 Aligned_cols=498 Identities=27% Similarity=0.393 Sum_probs=406.4
Q ss_pred CcccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcccCCceEEEEeC-CeEEEEEcCCcccCcEEEEcCCCcccccEE
Q 001638 195 DGVYDGLGIVLSILLVV-IVTAVSDYKQSLQFKALDKEKKNLIVQVTRD-GYRKKLSIYDLVVGDIVHLSIGDQVPADGI 272 (1039)
Q Consensus 195 ~~~~d~~~i~~~lllv~-~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgi 272 (1039)
++||++.+++++++++. ++.....++.++..++|.+ ..+..++|+|+ |++++|++++|+|||+|.+++||+|||||+
T Consensus 51 ~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~ 129 (562)
T TIGR01511 51 HTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGT 129 (562)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceE
Confidence 47889888766555443 3333333444444444544 34567888885 777999999999999999999999999999
Q ss_pred EEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHH
Q 001638 273 LISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVAT 352 (1039)
Q Consensus 273 ll~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~ 352 (1039)
+++|++ .||||+|||||.|+.|..++. +|+||.+.+|+++++|+++|.+|.+|++.+++.+++.+++|+|+.+++++.
T Consensus 130 v~~g~~-~vdes~lTGEs~pv~k~~gd~-V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~ 207 (562)
T TIGR01511 130 VIEGES-EVDESLVTGESLPVPKKVGDP-VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAG 207 (562)
T ss_pred EEECce-EEehHhhcCCCCcEEcCCCCE-EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 999987 899999999999999998766 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccc
Q 001638 353 VIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDK 432 (1039)
Q Consensus 353 ~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ 432 (1039)
++.+++++++++++++|. ..+..++++++++|||+|++++|+++..++.+++++|
T Consensus 208 ~~~~~v~~~a~~~~~~~~-------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~g 262 (562)
T TIGR01511 208 YFVPVVIAIALITFVIWL-------------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNG 262 (562)
T ss_pred HHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCC
Confidence 999988888877776532 2466789999999999999999999999999999999
Q ss_pred cccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceee
Q 001638 433 ALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVK 512 (1039)
Q Consensus 433 ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 512 (1039)
+++|+++++|+|+++|+||||||||||+|+|+|.++...+... .++.+.+ +....
T Consensus 263 Ilik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~---------------~~~~l~~---aa~~e------- 317 (562)
T TIGR01511 263 VLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRD---------------RTELLAL---AAALE------- 317 (562)
T ss_pred eEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCC---------------HHHHHHH---HHHHh-------
Confidence 9999999999999999999999999999999999986543210 1222222 11111
Q ss_pred cCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhh
Q 001638 513 DKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKI 592 (1039)
Q Consensus 513 ~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~ 592 (1039)
..+.||.++|+++++.+.+.+... .+-...+| .+.+... .+ + .-+..|+++.+.+
T Consensus 318 ------~~s~HPia~Ai~~~~~~~~~~~~~----~~~~~~~~----g~Gi~~~--~~--g--~~~~iG~~~~~~~----- 372 (562)
T TIGR01511 318 ------AGSEHPLAKAIVSYAKEKGITLVE----VSDFKAIP----GIGVEGT--VE--G--TKIQLGNEKLLGE----- 372 (562)
T ss_pred ------ccCCChHHHHHHHHHHhcCCCcCC----CCCeEEEC----CceEEEE--EC--C--EEEEEECHHHHHh-----
Confidence 112489999999999877654221 11111111 1222221 12 2 1234566655421
Q ss_pred hccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHC
Q 001638 593 INADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAA 672 (1039)
Q Consensus 593 ~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~a 672 (1039)
+|. .++ .+.++|.+++.++ .|.+++|+++++|++|||++++|++|++.
T Consensus 373 ---~~~--~~~------------~~~~~g~~~~~~~---------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~ 420 (562)
T TIGR01511 373 ---NAI--KID------------GKAEQGSTSVLVA---------------VNGELAGVFALEDQLRPEAKEVIQALKRR 420 (562)
T ss_pred ---CCC--CCC------------hhhhCCCEEEEEE---------------ECCEEEEEEEecccccHHHHHHHHHHHHc
Confidence 111 111 1346788888877 56789999999999999999999999999
Q ss_pred CCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEE
Q 001638 673 GITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAV 752 (1039)
Q Consensus 673 Gi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~ 752 (1039)
|+++.|+|||+..+++++++++||. +++++.|++|.++++.++++ ++.|+|
T Consensus 421 Gi~v~ilSgd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~ 471 (562)
T TIGR01511 421 GIEPVMLTGDNRKTAKAVAKELGIN----------------------------VRAEVLPDDKAALIKELQEK-GRVVAM 471 (562)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCCc----------------------------EEccCChHHHHHHHHHHHHc-CCEEEE
Confidence 9999999999999999999999993 67888999999999999998 899999
Q ss_pred EcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 753 TGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAA 832 (1039)
Q Consensus 753 ~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~ 832 (1039)
+|||.||+||+++||+||+|| .|++.+++.||++++++++..+..++++||+++++|++|+.|++++|++.+++++.+.
T Consensus 472 VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 472 VGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred EeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999 8999999999999999999999999999999999999999999999999888776443
No 30
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=7e-73 Score=679.12 Aligned_cols=504 Identities=26% Similarity=0.369 Sum_probs=416.9
Q ss_pred HHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCccc
Q 001638 176 LMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVV 255 (1039)
Q Consensus 176 l~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvv 255 (1039)
+.++++++++.+ .|+|+..+++.+++..+++.+.+++.++..+++.+ ..+.+++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445666666665 58898777776666666666666666666666665 346789999999999999999999
Q ss_pred CcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhcc
Q 001638 256 GDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSE 335 (1039)
Q Consensus 256 GDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~ 335 (1039)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|..++ .+|+||.+.+|+++++|++||.+|++|++.+++.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 99999999999999999999976 89999999999999998765 49999999999999999999999999999999998
Q ss_pred CCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhH
Q 001638 336 GGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPL 415 (1039)
Q Consensus 336 ~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lpl 415 (1039)
...+++|+|+.+++++.++.++.+++++++++++.. .. .| ...+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------~~--------~~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---LK--------RW--------PFWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--------cc--------HHHHHHHHHHHhhcCcccccc
Confidence 888999999999999999999988888776665421 10 11 125777899999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHH
Q 001638 416 AVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVF 495 (1039)
Q Consensus 416 avtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (1039)
++|++++.++++|.++|+++|+++++|++|++|++|||||||||+|+|+|.+++.. +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999987431 112
Q ss_pred HHHHHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEE
Q 001638 496 NIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFR 575 (1039)
Q Consensus 496 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~ 575 (1039)
. .+.... ....||.+.|+++++.+.+ . ......+|- + ++.....+ ..
T Consensus 274 ~---~a~~~e-------------~~~~hp~~~Ai~~~~~~~~-~-------~~~~~~~~g----~--gi~~~~~g-~~-- 320 (536)
T TIGR01512 274 R---LAAAAE-------------QASSHPLARAIVDYARKRE-N-------VESVEEVPG----E--GVRAVVDG-GE-- 320 (536)
T ss_pred H---HHHHHh-------------ccCCCcHHHHHHHHHHhcC-C-------CcceEEecC----C--eEEEEECC-eE--
Confidence 1 111111 1235899999999987654 1 111122221 1 11111122 22
Q ss_pred EEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeeccc
Q 001638 576 VFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIK 655 (1039)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~ 655 (1039)
+..|+++.+.+. + + ..+..+|.+++.++ .|..++|.+.++
T Consensus 321 -~~ig~~~~~~~~--------~----~------------~~~~~~~~~~~~v~---------------~~~~~~g~i~~~ 360 (536)
T TIGR01512 321 -VRIGNPRSLEAA--------V----G------------ARPESAGKTIVHVA---------------RDGTYLGYILLS 360 (536)
T ss_pred -EEEcCHHHHhhc--------C----C------------cchhhCCCeEEEEE---------------ECCEEEEEEEEe
Confidence 234766543211 1 0 03455677776665 467899999999
Q ss_pred CCCCccHHHHHHHHHHCCC-EEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 656 DPVRPGVREAVETCLAAGI-TVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi-~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
|++|||++++++.|+++|+ ++.|+|||+..+++++++++||.. +|+++.|++
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~ 413 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLPED 413 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCcHH
Confidence 9999999999999999999 999999999999999999999976 788999999
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHH
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFV 814 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i 814 (1039)
|..+++.+++. ++.|+|+|||.||+||+++||+|++||.+|++.++++||+++++|++..+.+++++||++++||++|+
T Consensus 414 K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl 492 (536)
T TIGR01512 414 KLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNV 492 (536)
T ss_pred HHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 89999999999999999999999999977899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001638 815 QFQLTVNIVALVINFVA 831 (1039)
Q Consensus 815 ~f~l~~Ni~~i~~~~~~ 831 (1039)
.|++.+|++++++++++
T Consensus 493 ~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 493 VIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999887764
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.3e-71 Score=701.01 Aligned_cols=510 Identities=25% Similarity=0.353 Sum_probs=415.6
Q ss_pred CcccchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEE
Q 001638 195 DGVYDGLGIVLSILLV-VIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGIL 273 (1039)
Q Consensus 195 ~~~~d~~~i~~~lllv-~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 273 (1039)
+.|||..++++.++++ -++......+..+..++|.+ ..+..++|+|||++++|+.++|+|||+|.+++||+|||||++
T Consensus 283 ~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~-l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v 361 (834)
T PRK10671 283 HLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLD-LTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEI 361 (834)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEE
Confidence 3488876665544332 22333333333333334433 346689999999999999999999999999999999999999
Q ss_pred EeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHH
Q 001638 274 ISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATV 353 (1039)
Q Consensus 274 l~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~ 353 (1039)
++|+. .||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+|.+++++++..++|+|+..++++.+
T Consensus 362 ~~g~~-~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~ 439 (834)
T PRK10671 362 TQGEA-WLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV 439 (834)
T ss_pred EEceE-EEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 99975 899999999999999988765 9999999999999999999999999999999999888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhcccc
Q 001638 354 IGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKA 433 (1039)
Q Consensus 354 i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~i 433 (1039)
+.++.++++++++++|.+ .+ .+ ..+...+..++++++++|||+|++++|+++..++.+++++|+
T Consensus 440 ~v~~v~~~a~~~~~~~~~---~~--------~~-----~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gi 503 (834)
T PRK10671 440 FVPVVVVIALVSAAIWYF---FG--------PA-----PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGV 503 (834)
T ss_pred HHHHHHHHHHHHHHHHHH---hC--------Cc-----hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCe
Confidence 999999888888776532 11 00 123456778999999999999999999999999999999999
Q ss_pred ccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeec
Q 001638 434 LVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKD 513 (1039)
Q Consensus 434 lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 513 (1039)
|+|+++++|+|+++|++|||||||||+|+|+|.+++..+.. ++. +.+..+.+.++.
T Consensus 504 lvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~--~~l~~a~~~e~~------ 559 (834)
T PRK10671 504 LVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV----------------DEA--QALRLAAALEQG------ 559 (834)
T ss_pred EEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC----------------CHH--HHHHHHHHHhCC------
Confidence 99999999999999999999999999999999987643321 111 122222222221
Q ss_pred CCCCccccCCchHHHHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhh
Q 001638 514 KDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKII 593 (1039)
Q Consensus 514 ~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~ 593 (1039)
+.||.++|+++++...... ...+|.....+ ++-...+ |. .+++|+++.+...
T Consensus 560 -------s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~~g~-Gv~~~~~--g~--~~~~G~~~~~~~~----- 611 (834)
T PRK10671 560 -------SSHPLARAILDKAGDMTLP-----------QVNGFRTLRGL-GVSGEAE--GH--ALLLGNQALLNEQ----- 611 (834)
T ss_pred -------CCCHHHHHHHHHHhhCCCC-----------CcccceEecce-EEEEEEC--CE--EEEEeCHHHHHHc-----
Confidence 3589999999987633211 01122222211 2211122 32 3466998866321
Q ss_pred ccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCC
Q 001638 594 NADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAG 673 (1039)
Q Consensus 594 ~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aG 673 (1039)
+ ++ ++.+.+.++.++++|.+++.+++ |..++|++++.|++||++++++++|++.|
T Consensus 612 ---~----~~---~~~~~~~~~~~~~~g~~~v~va~---------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~g 666 (834)
T PRK10671 612 ---Q----VD---TKALEAEITAQASQGATPVLLAV---------------DGKAAALLAIRDPLRSDSVAALQRLHKAG 666 (834)
T ss_pred ---C----CC---hHHHHHHHHHHHhCCCeEEEEEE---------------CCEEEEEEEccCcchhhHHHHHHHHHHCC
Confidence 1 11 12355667788899999999984 45789999999999999999999999999
Q ss_pred CEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEE
Q 001638 674 ITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVT 753 (1039)
Q Consensus 674 i~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~ 753 (1039)
+++.|+|||+..+++++++++||.. +++++.|++|.+.++.++++ ++.|+|+
T Consensus 667 i~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------~~~~~~p~~K~~~i~~l~~~-~~~v~~v 718 (834)
T PRK10671 667 YRLVMLTGDNPTTANAIAKEAGIDE---------------------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMV 718 (834)
T ss_pred CeEEEEcCCCHHHHHHHHHHcCCCE---------------------------EEeCCCHHHHHHHHHHHhhc-CCEEEEE
Confidence 9999999999999999999999975 89999999999999999998 8999999
Q ss_pred cCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001638 754 GNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINF 829 (1039)
Q Consensus 754 GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~ 829 (1039)
|||.||+||+++||+||+|| +|++.++++||+++++|++..|..++++||+++.||++|+.|.+.||++++++++
T Consensus 719 GDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 719 GDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred eCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 8999999999999999999999999999999999999999999999999998775
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-69 Score=617.36 Aligned_cols=816 Identities=21% Similarity=0.276 Sum_probs=556.6
Q ss_pred CCCCHH-HHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCCCCCcccchhHHHHHHHHHH
Q 001638 133 DGVASE-EVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVV 211 (1039)
Q Consensus 133 ~GL~~~-~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~~~~~~~~~~~~d~~~i~~~lllv~ 211 (1039)
.|...+ +++.-.++||.|++..+. ++|..++.|.-..|+..+..+|..+... .+-||.++.. ++.++
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~v-PtF~eLFkE~A~aPfFVFQVFcvgLWCL--------DeyWYySlFt---LfMli 228 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVV-PTFSELFKEHAVAPFFVFQVFCVGLWCL--------DEYWYYSLFT---LFMLI 228 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCC-ccHHHHHHHhccCceeeHhHHhHHHHHh--------HHHHHHHHHH---HHHHH
Confidence 566643 455555679999998765 5799999998888887777777776553 2357765433 33344
Q ss_pred HHHHHHHHHHHHHHHHHhccc-CCceEEEEeCCeEEEEEcCCcccCcEEEEcC---CCcccccEEEEeeCceeEeccCCC
Q 001638 212 IVTAVSDYKQSLQFKALDKEK-KNLIVQVTRDGYRKKLSIYDLVVGDIVHLSI---GDQVPADGILISGYSLTIDESSLS 287 (1039)
Q Consensus 212 ~v~a~~~~~~~~~~~~l~~~~-~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~---Gd~VPaDgill~g~~l~VDES~LT 287 (1039)
.+.+..-+++.+......+.. ++..+.|+|+++|+.+..+||+|||+|.+.. ...||||.+++.|++ .|||++||
T Consensus 229 ~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLt 307 (1160)
T KOG0209|consen 229 AFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLT 307 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhc
Confidence 455555566666666665543 3568999999999999999999999999987 458999999999976 79999999
Q ss_pred CCCCccccC----------------CCCceeecccEEe-------------eCCeEEEEEEeccchhhHHHHHHhccCCC
Q 001638 288 GETEPVHIN----------------RDRPFLLSGTKVQ-------------DGSGKMLVTSVGMRTEWGRLMVTLSEGGE 338 (1039)
Q Consensus 288 GEs~pv~k~----------------~~~~~l~sGt~v~-------------~G~~~~~V~~vG~~T~~gki~~~~~~~~~ 338 (1039)
|||.|.-|. .+..++|.||+++ +|-+.+.|+.||.+|..|++++.+--..+
T Consensus 308 GESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~ae 387 (1160)
T KOG0209|consen 308 GESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAE 387 (1160)
T ss_pred CCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecce
Confidence 999998875 1345799999997 57789999999999999999998876555
Q ss_pred CCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHH
Q 001638 339 DETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVT 418 (1039)
Q Consensus 339 ~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavt 418 (1039)
+-|.-. ...++ +++.+++|.+....|.+....... ...-.+.|.-.+-|+...+|.-||+-++
T Consensus 388 rvTaNn-----~Etf~----FILFLlVFAiaAa~Yvwv~Gskd~--------~RsrYKL~LeC~LIlTSVvPpELPmELS 450 (1160)
T KOG0209|consen 388 RVTANN-----RETFI----FILFLLVFAIAAAGYVWVEGSKDP--------TRSRYKLFLECTLILTSVVPPELPMELS 450 (1160)
T ss_pred eeeecc-----HHHHH----HHHHHHHHHHHhhheEEEecccCc--------chhhhheeeeeeEEEeccCCCCCchhhh
Confidence 444322 22221 112223333322222211111110 0111233445566677789999999999
Q ss_pred HHHHHHHHHhhccccccccchhhhcccceeEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHH
Q 001638 419 LSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIF 498 (1039)
Q Consensus 419 l~la~~~~~m~~~~ilvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 498 (1039)
++.-.+...+.|.++.+..+-.+.-.|++|..|||||||||+..|.|.++--.... .......+..+.+.+..
T Consensus 451 mAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~v- 523 (1160)
T KOG0209|consen 451 MAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVLV- 523 (1160)
T ss_pred HHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHHH-
Confidence 99999999999999999999999999999999999999999999999987432211 11111122233334333
Q ss_pred HHHHHhccCCceeecCCCCccccCCchHHHHHHHHHHh-C-CCccccc----ccccEEEEecCCCCCCceEEEEEcCCC-
Q 001638 499 LQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLIL-G-GDSTFHR----EESAIVKVEPFNSVKKRMSVLVSLPNN- 571 (1039)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-g-~~~~~~~----~~~~il~~~pF~s~rkrmsvvv~~~~~- 571 (1039)
++.||+-....+ ...|||.|+|.+++.... . .+....+ ...+|.+.+.|+|.-|||+++....+.
T Consensus 524 ---lAscHsLv~le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g 595 (1160)
T KOG0209|consen 524 ---LASCHSLVLLED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPG 595 (1160)
T ss_pred ---HHHHHHHHHhcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCC
Confidence 333443222111 278999999999865211 1 1111111 247789999999999999999876531
Q ss_pred --CeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCC------CCcCCCCC
Q 001638 572 --GGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGN------HKAESIPE 643 (1039)
Q Consensus 572 --~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~------~~~~~~~e 643 (1039)
-++.+.+|||||.|-.+-+. ..+.+.+...+++++|.||||++||++..- +.+.+..|
T Consensus 596 ~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vE 661 (1160)
T KOG0209|consen 596 SSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVE 661 (1160)
T ss_pred CceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhh
Confidence 36889999999999876553 235677888999999999999999999732 13446789
Q ss_pred CCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-----------------------
Q 001638 644 NNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG----------------------- 700 (1039)
Q Consensus 644 ~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~----------------------- 700 (1039)
+||+|.|.+.|.-|+|+|++++|+.+++.+.+|+|+||||+.||.++|+++||....
T Consensus 662 sdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t 741 (1160)
T KOG0209|consen 662 SDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGT 741 (1160)
T ss_pred hcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCc
Confidence 999999999999999999999999999999999999999999999999999997521
Q ss_pred ------------------CceeeCcccccCCH-HHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHH
Q 001638 701 ------------------GLAIEGTDFRSKNP-QEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAP 761 (1039)
Q Consensus 701 ------------------~~vi~G~~~~~~~~-~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~ 761 (1039)
+++++|..+..+.. +.+.++++.+.||||+.|.||..++..|++. |++++|+|||+||+.
T Consensus 742 ~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDVG 820 (1160)
T KOG0209|consen 742 IVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDVG 820 (1160)
T ss_pred eeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcchh
Confidence 34666666665543 4678889999999999999999999999999 999999999999999
Q ss_pred HhhhCCcceeecCCCcHHHHh-----------------------------------------------------------
Q 001638 762 ALHEADIGLAMGIAGTEVAKE----------------------------------------------------------- 782 (1039)
Q Consensus 762 aL~~AdVGIamgi~gt~~ak~----------------------------------------------------------- 782 (1039)
|||+||||||.= ++++..+.
T Consensus 821 ALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~ 899 (1160)
T KOG0209|consen 821 ALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDK 899 (1160)
T ss_pred hhhhcccceehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcc
Confidence 999999999975 33331100
Q ss_pred ------------ccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 001638 783 ------------NADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNM 850 (1039)
Q Consensus 783 ------------~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnl 850 (1039)
+|.+.----+.++|-++|+.||+..-+.-|.... |.-|.... ....+.+..-..-+...|...--+
T Consensus 900 ~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKI-LALN~Lis-AYslSvlyldGVKfgD~QaTisGl 977 (1160)
T KOG0209|consen 900 GDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKI-LALNCLIS-AYSLSVLYLDGVKFGDTQATISGL 977 (1160)
T ss_pred cCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHH-HHHHHHhhhcCceecchhHhHHHH
Confidence 0111111125778889999999998875444332 22232211 112223333445666677655444
Q ss_pred HhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhccccc------ccCCCCccchhh
Q 001638 851 IMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKIL------KLSGPNATLILN 924 (1039)
Q Consensus 851 i~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~------~~~~~~~~~~~~ 924 (1039)
++ ...-+.+....|-+.+-++.|. .+++|.-....+++|-..++..++++.-.....- .++....+...+
T Consensus 978 Ll-a~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllN 1053 (1160)
T KOG0209|consen 978 LL-AACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLN 1053 (1160)
T ss_pred HH-HHHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhh
Confidence 43 2345666678888888887774 4577766666666665555554444322111100 001111233455
Q ss_pred HHHHHHHHHHHHHH-HHHhccccccccccccchhHHHHHHHHHHHHHHHHHH-h---hhhhhhcccCCChHHH----HHH
Q 001638 925 TFIFNSFVFCQVFN-EINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIV-E---LLGTFATTVPLNWKLW----LAS 995 (1039)
Q Consensus 925 T~~f~~~v~~qv~n-~~~~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~v-~---~~~~~~~~~~l~~~~w----~~~ 995 (1039)
|.+|..-...|+.. ++|.+ ..++-+.+..|+.+++.+++...+-+.++ . =+...|..++++-.+- .+.
T Consensus 1054 t~vyiisl~~QvsTFAVNY~---G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l 1130 (1160)
T KOG0209|consen 1054 TTVYIISLAQQVSTFAVNYQ---GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVL 1130 (1160)
T ss_pred hHHHHHHHHHHHHHhhhhcc---CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHH
Confidence 55555444455542 34443 33455578888877766665544333332 2 2566777777763322 223
Q ss_pred HHHHHHHHHHHHHHhhhccCCcc
Q 001638 996 VVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 996 i~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
++--+++++++.+.|++-...+|
T Consensus 1131 ~lD~v~c~~~er~~~f~f~~~k~ 1153 (1160)
T KOG0209|consen 1131 VLDFVLCYLVERVLKFFFGDHKP 1153 (1160)
T ss_pred HHHHHHHHHHHHHHHHHccCCCc
Confidence 33445678888888876555555
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-59 Score=515.27 Aligned_cols=540 Identities=28% Similarity=0.391 Sum_probs=407.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceEEEEeC-CeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCC
Q 001638 211 VIVTAVSDYKQSLQFKALDKEKKNLIVQVTRD-GYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGE 289 (1039)
Q Consensus 211 ~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGE 289 (1039)
-+.+++.|.+-+.|...|.+.+.....+++++ |..+.|++.+|..||+|.++.||.||+||.+++|.. +||||.+|||
T Consensus 80 NfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGE 158 (681)
T COG2216 80 NFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGE 158 (681)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCC
Confidence 34445566666667777776666667777776 899999999999999999999999999999999987 9999999999
Q ss_pred CCccccCCCCce--eecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHH
Q 001638 290 TEPVHINRDRPF--LLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFL 367 (1039)
Q Consensus 290 s~pv~k~~~~~~--l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~i 367 (1039)
|.||-|..++.+ +-.||.|.+.+.+.++++.-.+|.+-|+..+++.++.++||-+--++-+-. ++.+..+..+
T Consensus 159 SaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~-----~LTliFL~~~ 233 (681)
T COG2216 159 SAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLS-----GLTLIFLLAV 233 (681)
T ss_pred CcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHH-----HHHHHHHHHH
Confidence 999999876432 899999999999999999999999999999999999999997765553322 2211111111
Q ss_pred HHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccchhhhcccce
Q 001638 368 VLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSA 447 (1039)
Q Consensus 368 v~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~~a~E~Lg~v 447 (1039)
+ ..|....+... .. -.+..-++++|..+|-...-.++-.=..+|.|+.+.|++.++..|+|..|.+
T Consensus 234 ~--Tl~p~a~y~~g--------~~----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDv 299 (681)
T COG2216 234 A--TLYPFAIYSGG--------GA----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDV 299 (681)
T ss_pred H--hhhhHHHHcCC--------CC----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCc
Confidence 1 11111111110 00 1133456788888998877777666677899999999999999999999999
Q ss_pred eEEEecCcCccccCceEEEEEEEcCcccccccCCcccccCCCCCHHHHHHHHHHHHhccCCceeecCCCCccccCCchHH
Q 001638 448 SCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTER 527 (1039)
Q Consensus 448 ~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~p~e~ 527 (1039)
|++..|||||+|.|+-.-.+++..+.. +++ -+..+....+-. + ..|.-+
T Consensus 300 dtliLDKTGTIT~GnR~A~~f~p~~gv----------------~~~---~la~aa~lsSl~----D--------eTpEGr 348 (681)
T COG2216 300 DTLLLDKTGTITLGNRQASEFIPVPGV----------------SEE---ELADAAQLASLA----D--------ETPEGR 348 (681)
T ss_pred cEEEecccCceeecchhhhheecCCCC----------------CHH---HHHHHHHHhhhc----c--------CCCCcc
Confidence 999999999999988777666654432 111 122222222211 1 146667
Q ss_pred HHHHHHHHhCCCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhhhccCCccccCCHHHH
Q 001638 528 AILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQR 607 (1039)
Q Consensus 528 All~~a~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~ 607 (1039)
.+++.|++++.+........ .....||+.+.|++++-. ++ + +-.-|||.+.+....+. .+|. . .
T Consensus 349 SIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~-~--~~irKGA~dai~~~v~~---~~g~-~------p 412 (681)
T COG2216 349 SIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PG-G--REIRKGAVDAIRRYVRE---RGGH-I------P 412 (681)
T ss_pred cHHHHHHHhccCCCcccccc-cceeeecceecccccccC--CC-C--ceeecccHHHHHHHHHh---cCCC-C------C
Confidence 89999999886544332221 346789999988777643 22 2 56789999999876542 2221 1 2
Q ss_pred HHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHH
Q 001638 608 KNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTA 687 (1039)
Q Consensus 608 ~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta 687 (1039)
+.+....++-++.|=..++++ .|-.++|++.++|-++||.+|-+.+||+.||+.+|+||||+.||
T Consensus 413 ~~l~~~~~~vs~~GGTPL~V~---------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TA 477 (681)
T COG2216 413 EDLDAAVDEVSRLGGTPLVVV---------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 477 (681)
T ss_pred HHHHHHHHHHHhcCCCceEEE---------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHH
Confidence 456777888899999999988 56789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCC
Q 001638 688 KAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 688 ~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
.+||++.|+++ ..|.++|+||.++++.-|.. |+.|+|||||+||+|||.+||
T Consensus 478 a~IA~EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAd 529 (681)
T COG2216 478 AAIAAEAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQAD 529 (681)
T ss_pred HHHHHHhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcc
Confidence 99999999987 88999999999999999999 999999999999999999999
Q ss_pred cceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHH--------Hc
Q 001638 768 IGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTV----NIVALVINFVAAC--------IT 835 (1039)
Q Consensus 768 VGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l~~----Ni~~i~~~~~~~~--------~~ 835 (1039)
||+||. +||.+|||++.+|=+|.|...+.++++.|++..-.=-....|.+.- -++.++..|.... ..
T Consensus 530 Vg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~ 608 (681)
T COG2216 530 VGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMH 608 (681)
T ss_pred hhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecc
Confidence 999999 9999999999999999999999999999998764322333333332 2233333333322 11
Q ss_pred CCCchHHHH-HHHHH-HHhhHHHHhHhc
Q 001638 836 GSAPLTAVQ-LLWVN-MIMDTLGALALA 861 (1039)
Q Consensus 836 ~~~pl~~~q-ll~vn-li~d~l~alala 861 (1039)
..+|-+++- -+.+| +|.-.|..|||-
T Consensus 609 L~sP~SAilSAlIfNAlIIv~LIPLAlk 636 (681)
T COG2216 609 LHSPQSAILSALIFNALIIVALIPLALK 636 (681)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 357777764 23444 344444555553
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=2.9e-33 Score=302.11 Aligned_cols=225 Identities=36% Similarity=0.570 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEe
Q 001638 203 IVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTID 282 (1039)
Q Consensus 203 i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VD 282 (1039)
+++.+++..++..+.+++.++..+++.+...+..++|+|||++++++++||+|||+|.|++||++||||++++...+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 34455666677778888888888888776555559999999999999999999999999999999999999994456999
Q ss_pred ccCCCCCCCccccCC----CCceeecccEEeeCCeEEEEEEeccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHH
Q 001638 283 ESSLSGETEPVHINR----DRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIG 358 (1039)
Q Consensus 283 ES~LTGEs~pv~k~~----~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~ 358 (1039)
||.+|||+.|+.|.. .++++|+||.+.+|++.++|++||.+|..|++.+...+...+++++++.+++++.++.++.
T Consensus 82 ~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 999999999999981 4677999999999999999999999999999999998888888999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhccccccccc
Q 001638 359 LVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHL 438 (1039)
Q Consensus 359 l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m~~~~ilvr~~ 438 (1039)
+++++++++++... . ....+...+..++++++++||++||+++++++.+++++|.++|+++|++
T Consensus 162 ~~~~~~~~~~~~~~--------~--------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~ 225 (230)
T PF00122_consen 162 LAIAILVFIIWFFN--------D--------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNL 225 (230)
T ss_dssp HHHHHHHHHHCHTG--------S--------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESST
T ss_pred cccchhhhccceec--------c--------cccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCc
Confidence 77776655433211 0 1123346778889999999999999999999999999999999999999
Q ss_pred hhhhc
Q 001638 439 SACET 443 (1039)
Q Consensus 439 ~a~E~ 443 (1039)
+++|+
T Consensus 226 ~a~E~ 230 (230)
T PF00122_consen 226 SALEA 230 (230)
T ss_dssp THHHH
T ss_pred ccccC
Confidence 99995
No 35
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.92 E-value=8.6e-25 Score=227.26 Aligned_cols=176 Identities=31% Similarity=0.498 Sum_probs=142.1
Q ss_pred CCchHHHHHHHHHHHhhHHHHhHhccCCCCccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 001638 837 SAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSG 916 (1039)
Q Consensus 837 ~~pl~~~qll~vnli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~ 916 (1039)
|.|++++|+||+|+++|++|+++++.|||++++|+|||++++++++++.+|+.++.++++++++.+..++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999888877776655444321
Q ss_pred C---CccchhhHHHHHHHHHHHHHHHHHhccccc-cccccccchhHHHHHHHHHHHHHHHHHHh--hhhhhhcccCCChH
Q 001638 917 P---NATLILNTFIFNSFVFCQVFNEINSRDMEK-INVFRGIFSSWVFIAVLVATVGFQVIIVE--LLGTFATTVPLNWK 990 (1039)
Q Consensus 917 ~---~~~~~~~T~~f~~~v~~qv~n~~~~r~~~~-~~~f~~~~~n~~f~~~~~~~~~~q~~~v~--~~~~~~~~~~l~~~ 990 (1039)
. ......+|+.|++++++|++|.+++|+.++ ...|+++++|+.+++++++++++|+++++ +++.+|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 1 012358999999999999999999999642 22335888999999999999999988765 48999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 001638 991 LWLASVVIGAISMPFGVLLKCI 1012 (1039)
Q Consensus 991 ~w~~~i~~~~~~~~~~~~~k~i 1012 (1039)
+|+++++++++.++++++.|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999975
No 36
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.88 E-value=9.2e-23 Score=217.18 Aligned_cols=97 Identities=43% Similarity=0.689 Sum_probs=91.2
Q ss_pred CcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccc
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKL 724 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~ 724 (1039)
+..++|.+.+.|++||+++++++.|+++|++++|+|||+..++.++|+++||.. .
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------~ 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------S 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------E
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------c
Confidence 789999999999999999999999999999999999999999999999999943 2
Q ss_pred eEEEec--ChhhH--HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCC
Q 001638 725 QVMARS--SPTDK--YILVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 725 ~v~ar~--sP~~K--~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
.|++++ +|++| .++++.|+.. ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 399999 99999 9999999966 568999999999999999997
No 37
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.87 E-value=7.3e-19 Score=198.25 Aligned_cols=290 Identities=13% Similarity=0.191 Sum_probs=220.7
Q ss_pred CcHHHHHhhhhhhhccCCccccCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCC---------------CC-------
Q 001638 580 GASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGN---------------HK------- 637 (1039)
Q Consensus 580 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~---------------~~------- 637 (1039)
|-...+...|+++||+. ...|++...|++.++...+-...| .|+++|||+..-. ++
T Consensus 698 g~ad~~~eACTdfWdGa-di~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDGA-DIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCCc-eeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 55678899999999854 578999999999999998887777 5899999975211 00
Q ss_pred --------------------cC-----------CCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHH
Q 001638 638 --------------------AE-----------SIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHT 686 (1039)
Q Consensus 638 --------------------~~-----------~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~t 686 (1039)
++ ...-.+.+|.|++....+.|++....|+.|.++-|+.+.+|-+++..
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 01135778999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCceeeCcccc---------------------------------------------------cCCH-
Q 001638 687 AKAIAKECGILTDGGLAIEGTDFR---------------------------------------------------SKNP- 714 (1039)
Q Consensus 687 a~~iA~~~GI~~~~~~vi~G~~~~---------------------------------------------------~~~~- 714 (1039)
.+-.|.++||...++..++-.+-. .++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 999999999987543222211100 0000
Q ss_pred ------------------------HHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHH--HhhhCCc
Q 001638 715 ------------------------QEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAP--ALHEADI 768 (1039)
Q Consensus 715 ------------------------~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~--aL~~AdV 768 (1039)
++++++..-+..|..++|+.-.++++.+|++ |++++++|...|-.. .+-+|||
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 2233333334589999999999999999999 999999999998544 5688999
Q ss_pred ceeecC------------CCcHH--HH----------------hccCEEeecCCchHHHHHHHHhHHHHHHHHHHHHHHH
Q 001638 769 GLAMGI------------AGTEV--AK----------------ENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQL 818 (1039)
Q Consensus 769 GIamgi------------~gt~~--ak----------------~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k~i~f~l 818 (1039)
+||+.. -++.. |. -+.|+.+-+...-+|.++|+.+|.....+|+.+.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 999731 01111 11 1245555555667888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHhhHHHHhH-hccCCCCccccCC
Q 001638 819 TVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALA-LATEPPHEGLMQR 872 (1039)
Q Consensus 819 ~~Ni~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~ala-la~e~p~~~lm~~ 872 (1039)
...+...++.|++.++..+..++..|++|...+--++..+. |-+.+|...+|-+
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEe
Confidence 99999999999999999999999999999998865554444 4455666655544
No 38
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=99.56 E-value=1.5e-15 Score=115.23 Aligned_cols=46 Identities=65% Similarity=0.998 Sum_probs=43.7
Q ss_pred cccCCccCCCCCCCHHHHHhhHHHhhhhcCccccchhhHHhhhHHH
Q 001638 4 YLKKNFDVDPKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRAE 49 (1039)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (1039)
|+.++|++++||+|+|+++|||+|+++|+||+|||||++||+|+++
T Consensus 1 yl~~~Fdi~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFDIPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccCCCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 5789999999999999999999999999999999999999998874
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.54 E-value=1.2e-14 Score=132.61 Aligned_cols=72 Identities=44% Similarity=0.721 Sum_probs=64.0
Q ss_pred cccCCchHHHHHHHHHHhC--CCcccccccccEEEEecCCCCCCceEEEEEcCCCCeEEEEEeCcHHHHHhhhhhh
Q 001638 519 NILGTPTERAILEFGLILG--GDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKI 592 (1039)
Q Consensus 519 ~~~g~p~e~All~~a~~~g--~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~ 592 (1039)
...|+|+|.||+.|+..+| .+....+..+++++++||||+||||+++++ .+ +.+.+|+|||||.||++|+++
T Consensus 18 ~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~-~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 18 EIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-ND-GKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred cccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CC-CEEEEEcCCChHHHHHhcCCC
Confidence 4899999999999999994 567788899999999999999999999998 33 457779999999999999863
No 40
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.47 E-value=2.7e-13 Score=125.71 Aligned_cols=126 Identities=24% Similarity=0.355 Sum_probs=107.3
Q ss_pred cEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccce
Q 001638 646 YTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQ 725 (1039)
Q Consensus 646 l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 725 (1039)
....+.++---.+=++++++|++|++. ++|.+.|||...+....|+-.||..+ +
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------r 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------R 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-------------------------e
Confidence 345666777777889999999999999 99999999999999999999999763 3
Q ss_pred EEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceee-cC-CCcHHHHhccCEEeecCCchHHHHHH
Q 001638 726 VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAM-GI-AGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 726 v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIam-gi-~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
||+...|+.|.++++.|++. ++.|.|+|||.||.+||++||+||.. +. ...+-+.++||+++-+ ...++++.
T Consensus 73 v~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl~ 146 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDLL 146 (152)
T ss_pred eecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHHh
Confidence 99999999999999999988 89999999999999999999999875 31 3344577999999975 55555543
No 41
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.20 E-value=3.9e-11 Score=103.65 Aligned_cols=67 Identities=30% Similarity=0.523 Sum_probs=64.1
Q ss_pred hCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHH
Q 001638 117 RGGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVS 183 (1039)
Q Consensus 117 ~~gv~~~~~~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls 183 (1039)
..+++++++.|+|+...||+.+|+++|+++||+|+++.++++++|+.++++|.++++++|++++++|
T Consensus 3 ~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 3 QLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 3578999999999999999999999999999999999999999999999999999999999999986
No 42
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.08 E-value=2.5e-10 Score=97.10 Aligned_cols=62 Identities=29% Similarity=0.402 Sum_probs=58.3
Q ss_pred HhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhcc
Q 001638 126 EVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVG 187 (1039)
Q Consensus 126 ~l~t~~~~GL~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls~~~~ 187 (1039)
.|+++...||+.+|+++|+++||.|+++.++++++|..++++|.++++++|++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46788888999999999999999999999988999999999999999999999999999765
No 43
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.02 E-value=2.4e-09 Score=118.61 Aligned_cols=67 Identities=24% Similarity=0.264 Sum_probs=57.2
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
.|..-++.+.+.+| +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++-.++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 56666666655544 45888899999999999999999999 999999999999998888888888875
No 44
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.97 E-value=6.1e-09 Score=114.97 Aligned_cols=144 Identities=25% Similarity=0.347 Sum_probs=106.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceeeC-ccc----------------------
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIEG-TDF---------------------- 709 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~G-~~~---------------------- 709 (1039)
+.+.++++++++++.|+++.++||++...++.+.+++|+... +..+... +.+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999751 1000000 000
Q ss_pred -------------------------------------c----------cCCH---HHHH----hhcc-cceEEEecCh--
Q 001638 710 -------------------------------------R----------SKNP---QEMQ----ELIP-KLQVMARSSP-- 732 (1039)
Q Consensus 710 -------------------------------------~----------~~~~---~~~~----~~~~-~~~v~ar~sP-- 732 (1039)
. .... ++.. +... ....+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0 0000 1111 1111 1223333333
Q ss_pred -------hhHHHHHHHHhhcCCC---EEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHH
Q 001638 733 -------TDKYILVTQLRNVFKE---VVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 733 -------~~K~~~V~~l~~~~g~---~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~ 802 (1039)
.+|...++.+.+..|- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.+|..++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 3799888888775453 4888899999999999999999999 9999999999988888899999998864
No 45
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.97 E-value=2.8e-09 Score=119.99 Aligned_cols=129 Identities=22% Similarity=0.317 Sum_probs=100.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--c-eeeCcccccCCHHHHHhhcccceEEE-ecCh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--L-AIEGTDFRSKNPQEMQELIPKLQVMA-RSSP 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~-vi~G~~~~~~~~~~~~~~~~~~~v~a-r~sP 732 (1039)
++.||+.+.++.|+++|+++.++||.....+..+.+++|+..-.. . +.+|.--. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg--------------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG--------------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe--------------EecCccCCc
Confidence 579999999999999999999999999888999999999854110 0 00110000 0000 0234
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 733 TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
+.|.+.++.+.++.| +.+.++|||.||.+|++.|++|||| ++.+..++.||+++...++..+..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 678988888876544 5688889999999999999999999 789999999999999889998887653
No 46
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.93 E-value=5e-09 Score=110.57 Aligned_cols=128 Identities=15% Similarity=0.094 Sum_probs=94.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeC-cccccCCHHHHHhhcccceEEEecChh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEG-TDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G-~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
+++|++++.|+.+++.| ++.++||-....+..+++++|+..--. ..+++ ..+ ... .. ..+.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~------------tG~-~~--~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV------------VGY-QL--RQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee------------ECe-ee--cCcc
Confidence 57999999999999986 999999999999999999999964211 11111 000 000 11 3577
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHh
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWG 803 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~g 803 (1039)
+|...++.+++. |..+.++|||.||.||++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 899999999877 767888999999999999999999996 6666555554333334677777776543
No 47
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.92 E-value=7.6e-09 Score=110.59 Aligned_cols=142 Identities=25% Similarity=0.337 Sum_probs=100.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceeeCcc-c--ccCC---------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIEGTD-F--RSKN--------------- 713 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~G~~-~--~~~~--------------- 713 (1039)
.+.|++.++|++|++.|+++.++||++...++.+++.+++..+ +..+....+ . ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998642 222222110 0 0000
Q ss_pred --------------------HHHHHhhccc--ceE-----EEe--cChhhHHHHHHHHhhcCC---CEEEEEcCCccCHH
Q 001638 714 --------------------PQEMQELIPK--LQV-----MAR--SSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAP 761 (1039)
Q Consensus 714 --------------------~~~~~~~~~~--~~v-----~ar--~sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~ 761 (1039)
.+++.+.+.+ ..+ +.. ....+|...++.+.+.+| +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0111111111 111 111 223588888888876544 35889999999999
Q ss_pred HhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHH
Q 001638 762 ALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 762 aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
|++.|++|+||+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987666666554
No 48
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.91 E-value=9.9e-09 Score=113.84 Aligned_cols=144 Identities=14% Similarity=0.146 Sum_probs=100.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCcee--eCcccc--cCC--------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAI--EGTDFR--SKN-------------- 713 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi--~G~~~~--~~~-------------- 713 (1039)
.+.+.++++|++++++|+++.+.||++...++.+.+++|+... +..+. .|..+. .++
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999998631 11111 010000 000
Q ss_pred -----------------------------------------------------HHHHH-------hhcc-cceE------
Q 001638 714 -----------------------------------------------------PQEMQ-------ELIP-KLQV------ 726 (1039)
Q Consensus 714 -----------------------------------------------------~~~~~-------~~~~-~~~v------ 726 (1039)
++++. +.+. ...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00000 0000 0111
Q ss_pred EEecCh--hhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCE--EeecCCchHHHHH
Q 001638 727 MARSSP--TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADV--IIMDDNFTTIVTV 799 (1039)
Q Consensus 727 ~ar~sP--~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDi--vl~dd~f~~i~~~ 799 (1039)
+...+| -.|..-++.+.+.+| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||. +..+++-.++..+
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 011222 257777777766544 45888899999999999999999999 999999999996 6667788888887
Q ss_pred HH
Q 001638 800 AR 801 (1039)
Q Consensus 800 i~ 801 (1039)
++
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 75
No 49
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.90 E-value=1e-08 Score=110.62 Aligned_cols=143 Identities=24% Similarity=0.291 Sum_probs=102.4
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceee---Cccccc--C---------------
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIE---GTDFRS--K--------------- 712 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~---G~~~~~--~--------------- 712 (1039)
+.|.+.++|+++++.|+++.++||++...+..+++++|+..+ +..+.. +..+.. +
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 788999999999999999999999999999999999998642 122221 111000 0
Q ss_pred ------------------------CHHHHHhhcc----cceE-----EEecChh--hHHHHHHHHhhcCC---CEEEEEc
Q 001638 713 ------------------------NPQEMQELIP----KLQV-----MARSSPT--DKYILVTQLRNVFK---EVVAVTG 754 (1039)
Q Consensus 713 ------------------------~~~~~~~~~~----~~~v-----~ar~sP~--~K~~~V~~l~~~~g---~~V~~~G 754 (1039)
..+++.+.+. ...+ +....|. .|..-++.+.+++| +.++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 0011111111 1111 1122232 47777777766544 4588889
Q ss_pred CCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 755 NGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 755 DG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
|+.||.+|++.|++|+||| ++.+.+|+.||++..+++=.++..+++
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999 999999999999998888888888775
No 50
>PRK10976 putative hydrolase; Provisional
Probab=98.89 E-value=1.6e-08 Score=111.80 Aligned_cols=67 Identities=21% Similarity=0.197 Sum_probs=55.5
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccC--EEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENAD--VIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aD--ivl~dd~f~~i~~~i~ 801 (1039)
+|..-++.+.+.+| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|+.+++=.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 46666666655444 45888899999999999999999999 99999999988 6777777888888775
No 51
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.85 E-value=9.9e-09 Score=109.93 Aligned_cols=128 Identities=21% Similarity=0.264 Sum_probs=95.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCcee--eCcccccCCHHHHHhhcccceEEEe-cChh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAI--EGTDFRSKNPQEMQELIPKLQVMAR-SSPT 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi--~G~~~~~~~~~~~~~~~~~~~v~ar-~sP~ 733 (1039)
+++|++++.++.|+++|+++.++||.....+..+.+.+|+..-....+ .+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 579999999999999999999999999999999999999965111000 000000 000111 1233
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
.|..+++.+.+..+ +.+.++||+.||.++++.|+++++++ +.+..+++||++|.+++|..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47777776655423 34778899999999999999999885 678899999999999999888754
No 52
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.84 E-value=1.8e-08 Score=109.49 Aligned_cols=144 Identities=27% Similarity=0.333 Sum_probs=102.2
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCce-e-eCccc-------------------
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLA-I-EGTDF------------------- 709 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~v-i-~G~~~------------------- 709 (1039)
..+.|++.+++++++++|+++.+.||++...+..+..++++..+ +..+ . .|+.+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 44779999999999999999999999999999999999998731 1111 0 00000
Q ss_pred --------------ccCC--------------------------------------H-------HHHHhhcccceEEEec
Q 001638 710 --------------RSKN--------------------------------------P-------QEMQELIPKLQVMARS 730 (1039)
Q Consensus 710 --------------~~~~--------------------------------------~-------~~~~~~~~~~~v~ar~ 730 (1039)
.... . +++.+..+....+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 0000 0 1122222221122222
Q ss_pred ---------ChhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHH
Q 001638 731 ---------SPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 731 ---------sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~ 798 (1039)
...+|...++.+.+.+| +.++++||+.||.+||+.|+.|+||| ++++..|+.||++..+.+=.++.+
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 23589998888876544 56788899999999999999999999 999999999999998776688776
Q ss_pred HH
Q 001638 799 VA 800 (1039)
Q Consensus 799 ~i 800 (1039)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 54
No 53
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.82 E-value=2.7e-08 Score=106.90 Aligned_cols=144 Identities=24% Similarity=0.302 Sum_probs=100.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceeeCcc----c-ccCCH------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIEGTD----F-RSKNP------------ 714 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~G~~----~-~~~~~------------ 714 (1039)
.+.+.+++++++++++|+++.++||++...+..+++++|+... +..+..... + ..+.+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778999999999999999999999999999999999996431 111211110 0 00000
Q ss_pred ------------------------HHHHhhccc----ceE-----EEecCh--hhHHHHHHHHhhcCC---CEEEEEcCC
Q 001638 715 ------------------------QEMQELIPK----LQV-----MARSSP--TDKYILVTQLRNVFK---EVVAVTGNG 756 (1039)
Q Consensus 715 ------------------------~~~~~~~~~----~~v-----~ar~sP--~~K~~~V~~l~~~~g---~~V~~~GDG 756 (1039)
++..+...+ ..+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 111111111 001 111222 378888888776544 468899999
Q ss_pred ccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchH----HHHHHH
Q 001638 757 TNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTT----IVTVAR 801 (1039)
Q Consensus 757 ~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~----i~~~i~ 801 (1039)
.||.+|++.|++|+||| ++.+.+|+.||+|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999988777777 555553
No 54
>PLN02887 hydrolase family protein
Probab=98.80 E-value=4.7e-08 Score=117.61 Aligned_cols=67 Identities=28% Similarity=0.343 Sum_probs=55.0
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
+|..-++.+.+.+| +.|+++|||.||.+||+.|+.||||| ||.+.+|+.||+|..+++=.+|..+++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 34444444444433 35788899999999999999999999 999999999999998888889988875
No 55
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.77 E-value=3.5e-08 Score=104.71 Aligned_cols=121 Identities=24% Similarity=0.242 Sum_probs=89.6
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEE-ecChhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMA-RSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~a-r~sP~~ 734 (1039)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-...++-.+ ..++. .+.. .+..+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~ltG----------~v~g~~~~~~~ 144 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKLTG----------RVVGPICDGEG 144 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEEec----------eeeeeecCcch
Confidence 67899999999999999999999999999999999999999863222221111 00000 1333 345578
Q ss_pred HHHHHHHHhhcCCC---EEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEee
Q 001638 735 KYILVTQLRNVFKE---VVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIM 789 (1039)
Q Consensus 735 K~~~V~~l~~~~g~---~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~ 789 (1039)
|...++.+.+..|. .+.++|||.||.|||+.|+.+++.+ +.+..+..|+..+.
T Consensus 145 K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 145 KAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred HHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 99988777664343 4777799999999999999999885 55555666665554
No 56
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.71 E-value=5e-08 Score=99.53 Aligned_cols=101 Identities=16% Similarity=0.159 Sum_probs=80.4
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEec--ChhhHHHHHHH
Q 001638 664 EAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARS--SPTDKYILVTQ 741 (1039)
Q Consensus 664 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~--sP~~K~~~V~~ 741 (1039)
.+|+.|+++|+++.++|+.+...+..+.+.+|+.. .|... .|+.-..+++.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~kpkp~~~~~~~~~ 93 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGIKKKTEPYAQMLEE 93 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecCCCCHHHHHHHHHH
Confidence 58999999999999999999999999999999964 33222 23333333333
Q ss_pred HhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCc
Q 001638 742 LRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNF 793 (1039)
Q Consensus 742 l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f 793 (1039)
++-. .+.++++||+.||.+|++.|++++||+ ++.+..|+.|++|..+++=
T Consensus 94 l~~~-~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~ 143 (169)
T TIGR02726 94 MNIS-DAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGG 143 (169)
T ss_pred cCcC-HHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCC
Confidence 3322 356899999999999999999999999 9999999999999865443
No 57
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.70 E-value=1.6e-07 Score=104.03 Aligned_cols=67 Identities=28% Similarity=0.353 Sum_probs=56.2
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
+|...++.+.++.| +.++++||+.||.+|++.|++|+||| ++.+..|+.||++..+++-.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 46666665554434 45888899999999999999999999 899999999999999888888988875
No 58
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.68 E-value=9.5e-08 Score=96.50 Aligned_cols=98 Identities=20% Similarity=0.320 Sum_probs=80.4
Q ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhh
Q 001638 665 AVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRN 744 (1039)
Q Consensus 665 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~ 744 (1039)
+++.|+++|+++.++||++...+..+.+++|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 9999999999999999999999999999999864 22221 345555555543
Q ss_pred cCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCC
Q 001638 745 VFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDN 792 (1039)
Q Consensus 745 ~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~ 792 (1039)
+.| +.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 322 56899999999999999999999999 888899999999997554
No 59
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.59 E-value=3.7e-07 Score=100.35 Aligned_cols=142 Identities=27% Similarity=0.363 Sum_probs=98.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceee--Ccccc--cC---------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIE--GTDFR--SK--------------- 712 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~--G~~~~--~~--------------- 712 (1039)
++.+++.++|++++++|+++.++||++...+..+.+++|+..+ +..+.. |+.+. .+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999998631 111110 00000 00
Q ss_pred ------------------------------------------------------CH---HHHHhhcc------cceE---
Q 001638 713 ------------------------------------------------------NP---QEMQELIP------KLQV--- 726 (1039)
Q Consensus 713 ------------------------------------------------------~~---~~~~~~~~------~~~v--- 726 (1039)
.+ +++.+.+. .+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 00 01111111 1111
Q ss_pred ---EEecCh--hhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHH
Q 001638 727 ---MARSSP--TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 727 ---~ar~sP--~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~ 798 (1039)
+-...| ..|..-++.+.+..| +.++++||+.||.+|++.|+.|+||| ++.+.+|+.||+++.+++-.++..
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhh
Confidence 111222 257777777766533 46888999999999999999999999 999999999999998877777665
Q ss_pred H
Q 001638 799 V 799 (1039)
Q Consensus 799 ~ 799 (1039)
+
T Consensus 255 ~ 255 (256)
T TIGR00099 255 A 255 (256)
T ss_pred h
Confidence 4
No 60
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.55 E-value=6.4e-07 Score=98.46 Aligned_cols=143 Identities=17% Similarity=0.154 Sum_probs=95.8
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC-----CCCceeeCcc--------c--ccCCHHHHHhh--
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT-----DGGLAIEGTD--------F--RSKNPQEMQEL-- 720 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~-----~~~~vi~G~~--------~--~~~~~~~~~~~-- 720 (1039)
..+.++++|++|+++|++++++||+....+..+.+++|+.. ++..+..... + ..+..+.+.++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999853 2223332111 0 00111100000
Q ss_pred ---------------------------------------------------------cc--cceEE-----EecC--hhh
Q 001638 721 ---------------------------------------------------------IP--KLQVM-----ARSS--PTD 734 (1039)
Q Consensus 721 ---------------------------------------------------------~~--~~~v~-----ar~s--P~~ 734 (1039)
+. .+.+. -... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00 00000 0011 135
Q ss_pred HHHHHHHHhhcCC-----CEEEEEcCCccCHHHhhhCCcceeecCCCc---HHHHhc--c-CEEeecCCchHHHHHHH
Q 001638 735 KYILVTQLRNVFK-----EVVAVTGNGTNDAPALHEADIGLAMGIAGT---EVAKEN--A-DVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 735 K~~~V~~l~~~~g-----~~V~~~GDG~ND~~aL~~AdVGIamgi~gt---~~ak~~--a-Divl~dd~f~~i~~~i~ 801 (1039)
|...++.+.+.+| +.++++||+.||.+||+.|+.|+||| ++. +..|+. | ++|..+++-.++..+++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 6666666655433 45889999999999999999999999 887 467876 4 58877888888888775
No 61
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.54 E-value=2.9e-07 Score=95.72 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=85.5
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHh
Q 001638 664 EAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLR 743 (1039)
Q Consensus 664 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~ 743 (1039)
.+++.|+++|+++.++||.+...+..+++++|+.. +|. ..++|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 69999999999999999999999999999999864 332 2345666666654
Q ss_pred hcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecC----CchHHHHHHH
Q 001638 744 NVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDD----NFTTIVTVAR 801 (1039)
Q Consensus 744 ~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd----~f~~i~~~i~ 801 (1039)
+..| +.++|+||+.||.+|++.|+++++++ ++.+..+..||+++-.. .+..+.+.+.
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence 4434 46899999999999999999999998 88888899999999532 2445555443
No 62
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.51 E-value=7.8e-07 Score=98.64 Aligned_cols=143 Identities=11% Similarity=0.073 Sum_probs=94.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC------CCCceeeCcc--------c-c-cCCHHHHHhhc
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT------DGGLAIEGTD--------F-R-SKNPQEMQELI 721 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~------~~~~vi~G~~--------~-~-~~~~~~~~~~~ 721 (1039)
+-+.++++|++|+++|+++++.||+....+..+++++|+.. ++..+..... . . .++.+.+.+++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45779999999999999999999999999999999999852 2233332111 0 0 01111100000
Q ss_pred --------------------------------------cc--ceEEE----------------------------ecCh-
Q 001638 722 --------------------------------------PK--LQVMA----------------------------RSSP- 732 (1039)
Q Consensus 722 --------------------------------------~~--~~v~a----------------------------r~sP- 732 (1039)
.. ..+.. ...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 00 00111 1122
Q ss_pred -hhHHHHHHHHhhcCC------CEEEEEcCCccCHHHhhhCCcceeecCCCc-HH-----HHhccCEEeecCCchHHHHH
Q 001638 733 -TDKYILVTQLRNVFK------EVVAVTGNGTNDAPALHEADIGLAMGIAGT-EV-----AKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 733 -~~K~~~V~~l~~~~g------~~V~~~GDG~ND~~aL~~AdVGIamgi~gt-~~-----ak~~aDivl~dd~f~~i~~~ 799 (1039)
.+|..-++.+.+++| +.|+++|||.||.+||+.|++|+||| ++. +. .+..+|++.....-.++..+
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 356666666654323 46888899999999999999999999 444 32 34578998888777888887
Q ss_pred HH
Q 001638 800 AR 801 (1039)
Q Consensus 800 i~ 801 (1039)
++
T Consensus 264 l~ 265 (271)
T PRK03669 264 LD 265 (271)
T ss_pred HH
Confidence 75
No 63
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.44 E-value=1.1e-06 Score=93.03 Aligned_cols=124 Identities=19% Similarity=0.234 Sum_probs=90.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcccccCCHHHHHhhcccceEEE--ecCh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTDFRSKNPQEMQELIPKLQVMA--RSSP 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~~~~~~~~~~~~~~~~~~v~a--r~sP 732 (1039)
++.||+++.++.|+++ +++.++|+.....+..+.+++|+..--. ....+... +.. -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM----------------ITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe----------------EECcccccc
Confidence 3589999999999999 9999999999999999999999863111 11110000 000 1246
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHH
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
..|...++.++.. ++.+.|+|||.||.+|.+.|++|+..+ .+.+.....++..+. +++..+...+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHH
Confidence 7888888988877 788999999999999999999999887 444444455666332 2466666554
No 64
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.38 E-value=1.3e-06 Score=91.89 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
+++|++.+.++.|+++|+++.++|+-....+..+++.+|+..--...+...+-.... +. .+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~--------p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQ--------PD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEe--------cc--eeeEEccccHH
Confidence 579999999999999999999999999999999999999754111111110000000 11 11123466787
Q ss_pred HHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccC
Q 001638 737 ILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENAD 785 (1039)
Q Consensus 737 ~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aD 785 (1039)
..++.+.+..| +.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 77777654423 45888999999999999999999997 44444555555
No 65
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.32 E-value=5e-06 Score=92.33 Aligned_cols=144 Identities=17% Similarity=0.157 Sum_probs=96.2
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC-----CCceeeCcc----------------cc--cC
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD-----GGLAIEGTD----------------FR--SK 712 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~-----~~~vi~G~~----------------~~--~~ 712 (1039)
..+.++++++|+.|++.|++++++||+....+..+++++|+..+ +..+..... +. .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 35678899999999999999999999999999999999998642 223322110 00 00
Q ss_pred CHHHHHh-------------------------------------h----cccceEE-E----------------------
Q 001638 713 NPQEMQE-------------------------------------L----IPKLQVM-A---------------------- 728 (1039)
Q Consensus 713 ~~~~~~~-------------------------------------~----~~~~~v~-a---------------------- 728 (1039)
+.+.+.+ . +... ++ .
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~ 178 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEP-FLWNGSEAAKERFEEALKRLGLKVTR 178 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCc-eeecCchHHHHHHHHHHHHcCCEEEE
Confidence 1100000 0 0000 11 0
Q ss_pred -----ecC-hhhHHHHHHHHhhcC---C-CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHH----hcc-CEEe--ecC
Q 001638 729 -----RSS-PTDKYILVTQLRNVF---K-EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAK----ENA-DVII--MDD 791 (1039)
Q Consensus 729 -----r~s-P~~K~~~V~~l~~~~---g-~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak----~~a-Divl--~dd 791 (1039)
... +..|...++.+.+.. . +.|+++||+.||.+|++.|++|+||+ ||.+.+| ..| +.+. ...
T Consensus 179 ~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~ 257 (273)
T PRK00192 179 GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAP 257 (273)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCC
Confidence 011 115666666665432 3 77999999999999999999999999 9999999 666 6776 344
Q ss_pred CchHHHHHHH
Q 001638 792 NFTTIVTVAR 801 (1039)
Q Consensus 792 ~f~~i~~~i~ 801 (1039)
+=.++..+++
T Consensus 258 ~~~Gv~~~l~ 267 (273)
T PRK00192 258 GPEGWAEAIN 267 (273)
T ss_pred CcHHHHHHHH
Confidence 5667777764
No 66
>PRK08238 hypothetical protein; Validated
Probab=98.29 E-value=0.00012 Score=87.02 Aligned_cols=99 Identities=19% Similarity=0.233 Sum_probs=75.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
|++|++.+.+++++++|+++.++|+-+...++.+++.+|+.+ .++.+++. .++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~~------------------~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDGT------------------TNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCCc------------------cccCCchHH
Confidence 578999999999999999999999999999999999999832 33333221 135677777
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEV 779 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ 779 (1039)
+.++..... ++ +.++||+.||.|+++.|+-.++++ .+...
T Consensus 131 ~~l~~~l~~-~~-~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 131 AALVEAFGE-RG-FDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred HHHHHHhCc-cC-eeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 655533222 22 567799999999999999999998 44443
No 67
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.27 E-value=2.7e-06 Score=82.70 Aligned_cols=118 Identities=19% Similarity=0.293 Sum_probs=95.2
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHh
Q 001638 664 EAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLR 743 (1039)
Q Consensus 664 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~ 743 (1039)
-.|+.+.++||++-++||++...++.=|+++||.. ++-. -.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~qG--~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQG--ISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eeec--hHhHHHHHHHHH
Confidence 47999999999999999999999999999999975 4433 457888887776
Q ss_pred hcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCC----chHHHHHHHHhHHHHHHHH
Q 001638 744 NVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDN----FTTIVTVARWGRSVYINIQ 811 (1039)
Q Consensus 744 ~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~----f~~i~~~i~~gR~~~~nI~ 811 (1039)
++.+ +.|+++||..||.|+|+..+.++|.. ++.+..++.||+|+.... +..+.++|..++.-++-..
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 6533 56899999999999999999999998 888999999999987543 4455556665655555433
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.20 E-value=2.8e-06 Score=85.18 Aligned_cols=104 Identities=23% Similarity=0.365 Sum_probs=76.6
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--cee----eCcccccCCHHHHHhhcccceEEEecC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAI----EGTDFRSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi----~G~~~~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
+-||+++.+..|++.|.+|.++||--..-+..+|.++||...+. ..+ +|+-.. . ++ --.-+.
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-f--d~---------~~ptsd 156 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-F--DT---------NEPTSD 156 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-c--cc---------CCcccc
Confidence 57999999999999999999999999999999999999976321 000 011000 0 00 001123
Q ss_pred hhhHHHHHHHHhhcC-CCEEEEEcCCccCHHHhhhCCcceeec
Q 001638 732 PTDKYILVTQLRNVF-KEVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~-g~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
...|.+.++.+++.. -..++|+|||.||.+|+..||-=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 457999999988753 358999999999999999988777655
No 69
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.20 E-value=9.9e-06 Score=86.55 Aligned_cols=133 Identities=15% Similarity=0.113 Sum_probs=88.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCC---CCceeeCcccccCCHHHHHhhcccceEE---Ee
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTD---GGLAIEGTDFRSKNPQEMQELIPKLQVM---AR 729 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~---~~~vi~G~~~~~~~~~~~~~~~~~~~v~---ar 729 (1039)
-+++||+++.++.|++.|+++.++||.....+..+.+.++.... +....+|..+.... +.-..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~--------p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW--------PHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC--------CCCCccccccC
Confidence 46899999999999999999999999999999999988754321 11223333222110 000000 01
Q ss_pred cChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHh--ccCEEeecCCchHHHHHHH
Q 001638 730 SSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKE--NADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 730 ~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~--~aDivl~dd~f~~i~~~i~ 801 (1039)
| ...|..+++.++.. .+.+.|+|||.||.+|++.||+++|-+ .-.+-.++ .+.+.+ ++|..+...++
T Consensus 141 c-g~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 C-GCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred C-CCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1 35799999998876 677889999999999999999988754 21121121 122222 46888777664
No 70
>PLN02954 phosphoserine phosphatase
Probab=98.20 E-value=1.3e-05 Score=86.16 Aligned_cols=128 Identities=21% Similarity=0.292 Sum_probs=84.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEe------cC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR------SS 731 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar------~s 731 (1039)
++|++++.++.|+++|+++.++||.....+..+++.+|+.... ++. ..+.. . .+-.+.+. +.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~-~~~~~-~--------~~g~~~g~~~~~~~~~ 152 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFA-NQILF-G--------DSGEYAGFDENEPTSR 152 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEE-eEEEE-c--------CCCcEECccCCCcccC
Confidence 6899999999999999999999999999999999999996311 110 00000 0 00000000 11
Q ss_pred hhhHHHHHHHHhhcCC-CEEEEEcCCccCHHHhhh--CCcceeecCCC-cHHHHhccCEEeecCCchHHHHH
Q 001638 732 PTDKYILVTQLRNVFK-EVVAVTGNGTNDAPALHE--ADIGLAMGIAG-TEVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g-~~V~~~GDG~ND~~aL~~--AdVGIamgi~g-t~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
...|...++.+.+..| +.+.++||+.||..|.+. ++++++.|... .+.....+|+++. ++..+...
T Consensus 153 ~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred CccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 2357777777765423 468889999999999877 56666665221 2334556899985 46666543
No 71
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.17 E-value=1.2e-05 Score=87.39 Aligned_cols=67 Identities=16% Similarity=0.188 Sum_probs=55.8
Q ss_pred hHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccC----EEeecCCchHHHHHHH
Q 001638 734 DKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENAD----VIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aD----ivl~dd~f~~i~~~i~ 801 (1039)
.|...++.+.+++| ..++++||+.||.+|++.|+.|++|+ ++.+..|+.|| ++...++=.++.++++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 67787887766544 24778899999999999999999999 99999999999 7766666677888775
No 72
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.12 E-value=5.9e-06 Score=86.26 Aligned_cols=92 Identities=25% Similarity=0.278 Sum_probs=69.8
Q ss_pred ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh-h--HH
Q 001638 660 PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT-D--KY 736 (1039)
Q Consensus 660 ~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~-~--K~ 736 (1039)
|++.+.++.++++|++++++||+....++.+|+.+|+.... ++....+..- +....++.++. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~----------~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNG----------GGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTT----------CCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecc----------cceeeeeECCCCCCcHH
Confidence 78889999999999999999999999999999999997522 1111111000 12245566655 4 99
Q ss_pred HHHHHH------hhcCCCEEEEEcCCccCHHHhh
Q 001638 737 ILVTQL------RNVFKEVVAVTGNGTNDAPALH 764 (1039)
Q Consensus 737 ~~V~~l------~~~~g~~V~~~GDG~ND~~aL~ 764 (1039)
..++.+ +.. ...+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 333 678999999999999986
No 73
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.04 E-value=2.9e-05 Score=83.42 Aligned_cols=128 Identities=23% Similarity=0.363 Sum_probs=88.7
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++.||+.+.++.|++.|+++.++||........+.+..|+...-..++.+.+... ..-.|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN----------------KKPDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC----------------CCcChHHH
Confidence 35789999999999999999999999999999999999998653333333222110 01122222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc-ceee--cCC-CcHHHHhccCEEeecCCchHHHHHHHH
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADI-GLAM--GIA-GTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV-GIam--gi~-gt~~ak~~aDivl~dd~f~~i~~~i~~ 802 (1039)
..+++.++.. .+.+.++||+.||..+.+.|++ +|.+ |.. ..+.....+|+++ +++..+...+.+
T Consensus 156 ~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 156 LLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 3344444443 4568899999999999999998 4443 321 2344556788888 468888887654
No 74
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.03 E-value=3.7e-05 Score=84.18 Aligned_cols=146 Identities=15% Similarity=0.171 Sum_probs=96.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-------CceeeCc-ccccC--------------
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-------GLAIEGT-DFRSK-------------- 712 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-------~~vi~G~-~~~~~-------------- 712 (1039)
..+..|...++++++++.|+.++.+||+....++.+.+++++..+. ..+..+. .....
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567799999999999999999999999999999999999986542 1122111 00000
Q ss_pred ----------------------------CHHH----H---Hhhcc----cceE-EE-----ecCh--hhHHHHHHHHhhc
Q 001638 713 ----------------------------NPQE----M---QELIP----KLQV-MA-----RSSP--TDKYILVTQLRNV 745 (1039)
Q Consensus 713 ----------------------------~~~~----~---~~~~~----~~~v-~a-----r~sP--~~K~~~V~~l~~~ 745 (1039)
..+. + .+.+. ++.+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 1 11111 1111 11 1223 4788888888765
Q ss_pred CC---CEEEEEcCCccCHHHhhh-CCcceeecCCCcHHHHhccC-------EEeecCCchHHHHHHH
Q 001638 746 FK---EVVAVTGNGTNDAPALHE-ADIGLAMGIAGTEVAKENAD-------VIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 746 ~g---~~V~~~GDG~ND~~aL~~-AdVGIamgi~gt~~ak~~aD-------ivl~dd~f~~i~~~i~ 801 (1039)
+| +.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++-....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 44 568888999999999998 67999999 99998886543 4433334566666654
No 75
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.02 E-value=1.7e-05 Score=83.72 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=77.0
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcccccCCHHHHHhhcccceEE-EecC
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTDFRSKNPQEMQELIPKLQVM-ARSS 731 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~~~~~~~~~~~~~~~~~~v~-ar~s 731 (1039)
..+++|++.+.++.+++.|+++.++||.....+..+++.+|+..--+ ........ .+ .+ +. -.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~--~~--------g~--~~~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGI--YT--------GN--IDGNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCE--Ee--------CC--ccCCCCC
Confidence 34689999999999999999999999999999999999999964100 11100000 00 00 00 1234
Q ss_pred hhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeec
Q 001638 732 PTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
++.|...++.+.+..+ +.+.++||+.+|.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6788888877654323 25788899999999999999999876
No 76
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.01 E-value=3.7e-05 Score=82.51 Aligned_cols=128 Identities=23% Similarity=0.357 Sum_probs=97.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+...-..++.+.+... ..-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~----------------~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP----------------PKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC----------------CCcCHHH
Confidence 346789999999999999999999999999999999999999875444444333221 1124555
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCC---cceeecCC-CcHHHHhccCEEeecCCchHHHHHHH
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEAD---IGLAMGIA-GTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~Ad---VGIamgi~-gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
...+.+.+.-. .+.++||||..+|..|-++|+ ||+..|.+ +.+.....+|+++.+ +..+...+.
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l~ 218 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALLA 218 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHHh
Confidence 55666666544 457999999999999999998 78888853 456677789999964 777766543
No 77
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.94 E-value=1.8e-05 Score=81.57 Aligned_cols=101 Identities=23% Similarity=0.219 Sum_probs=69.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYI 737 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 737 (1039)
++|++.+.++.+++.|+++.++||.....++.+++.+|+..--...+...+-.... .+...-..+.+..|..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~--------g~~~~~~~~~~~~K~~ 145 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLT--------GPIEGQVNPEGECKGK 145 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEe--------CccCCcccCCcchHHH
Confidence 58999999999999999999999999999999999999864111111000000000 0000001245678999
Q ss_pred HHHHHhhcCC---CEEEEEcCCccCHHHhhhC
Q 001638 738 LVTQLRNVFK---EVVAVTGNGTNDAPALHEA 766 (1039)
Q Consensus 738 ~V~~l~~~~g---~~V~~~GDG~ND~~aL~~A 766 (1039)
.++.+++..| +.+.++|||.||.+|++.|
T Consensus 146 ~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 146 VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 9988765422 4588889999999999875
No 78
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.93 E-value=4.4e-05 Score=81.87 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC----CceeeCcccccCCHHHHHhhcccceEE---Ee
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG----GLAIEGTDFRSKNPQEMQELIPKLQVM---AR 729 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~----~~vi~G~~~~~~~~~~~~~~~~~~~v~---ar 729 (1039)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +.... ....+|....... +..... .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~k--------p~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITW--------PHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEec--------cCCcccccccc
Confidence 57999999999999999999999999999999999988 64311 1112222211000 000000 00
Q ss_pred cChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHh--ccCEEeecCCchHHHHHHH
Q 001638 730 SSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKE--NADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 730 ~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~--~aDivl~dd~f~~i~~~i~ 801 (1039)
+ ...|...++.++.. +..+.++|||.||.+|.+.||+.++-+ .-.+.+++ .+.+.+ ++|..+...++
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 1 13488888888776 566889999999999999999977632 11122222 233333 45777776653
No 79
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.92 E-value=4e-05 Score=79.66 Aligned_cols=115 Identities=13% Similarity=0.077 Sum_probs=77.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEe-cChhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR-SSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar-~sP~~ 734 (1039)
-+++|++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..+++.+...+- ...+.-...++.++.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN-DGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC-CCcEEEecCCCCccCcCCCCCC
Confidence 368999999999999999999999999999999999999986532233332221110 0000000011111111 11235
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
|..+++.++++..+.+.++|||.||.+|.++||+-+|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 8889999876424568888999999999999988765
No 80
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.87 E-value=3.4e-05 Score=74.88 Aligned_cols=113 Identities=19% Similarity=0.149 Sum_probs=75.1
Q ss_pred cccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh
Q 001638 653 GIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 653 ~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP 732 (1039)
.-..++++++.+.++.|+++|++++++||.....+....+.+|+......++......................+.+-.|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 45568899999999999999999999999999999999999998543222222111110000000000111123334555
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhC
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEA 766 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~A 766 (1039)
+.+..+.+.+... .+.+.++||+.+|.+|++.+
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~ 132 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAA 132 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHc
Confidence 5666666666554 56788999999999999984
No 81
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.86 E-value=6.6e-05 Score=80.78 Aligned_cols=44 Identities=18% Similarity=0.173 Sum_probs=39.3
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT 698 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~ 698 (1039)
.+..-++++++|++|+++|++++++||+....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34556789999999999999999999999999999999999853
No 82
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.79 E-value=9.2e-05 Score=78.42 Aligned_cols=125 Identities=18% Similarity=0.230 Sum_probs=84.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.+...+..+-+..|+...-..++...+.. ..+-.|+-=.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVP----------------RPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCC----------------CCCCChHHHH
Confidence 678999999999999999999999999999999999999864222222222110 0111222223
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce---eecC-CCcHHHHhccCEEeecCCchHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL---AMGI-AGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI---amgi-~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
.+++.++-. .+.++|+||+.+|..+-++|++.. .-|. +..+..++.+|+++. ++..+..++
T Consensus 139 ~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred HHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 333333323 466899999999999999999753 3341 223346778999884 466666554
No 83
>PLN02382 probable sucrose-phosphatase
Probab=97.75 E-value=0.00022 Score=83.63 Aligned_cols=143 Identities=17% Similarity=0.131 Sum_probs=92.4
Q ss_pred CCccHHHHH-HHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-------CceeeCccccc------------------
Q 001638 658 VRPGVREAV-ETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-------GLAIEGTDFRS------------------ 711 (1039)
Q Consensus 658 lR~~v~~aI-~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-------~~vi~G~~~~~------------------ 711 (1039)
+.+...+++ +++++.|+.+++.||+....++.+.++.++..+. ..+..+.....
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 343445555 8899999999999999999999999999987652 11111111100
Q ss_pred -----C--------------------CH-------HHHHhhcc----cceE------EEecCh--hhHHHHHHHHhhcC-
Q 001638 712 -----K--------------------NP-------QEMQELIP----KLQV------MARSSP--TDKYILVTQLRNVF- 746 (1039)
Q Consensus 712 -----~--------------------~~-------~~~~~~~~----~~~v------~ar~sP--~~K~~~V~~l~~~~- 746 (1039)
. .+ +++.+.+. .+.+ +-...| ..|...++.|.+++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 00 01111111 1111 112333 35888888887764
Q ss_pred --C---CEEEEEcCCccCHHHhhhCC-cceeecCCCcHHHHhcc--------CEEeec-CCchHHHHHHH
Q 001638 747 --K---EVVAVTGNGTNDAPALHEAD-IGLAMGIAGTEVAKENA--------DVIIMD-DNFTTIVTVAR 801 (1039)
Q Consensus 747 --g---~~V~~~GDG~ND~~aL~~Ad-VGIamgi~gt~~ak~~a--------Divl~d-d~f~~i~~~i~ 801 (1039)
| +.++++||+.||.+||+.|+ .||+|| ++.+..|+.+ +++..+ .+-.+|..+++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 46788899999999999999 699999 9999888743 555443 34556666654
No 84
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.70 E-value=0.00033 Score=75.14 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=36.2
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
-+.++++++.++++|+++.++||++...++.+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999986
No 85
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.57 E-value=0.00051 Score=75.88 Aligned_cols=137 Identities=13% Similarity=0.194 Sum_probs=86.5
Q ss_pred CCCccHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCC--CCCC-cee--eCcc-cccCCH---------------
Q 001638 657 PVRPGVREAVETCLA-AGITVRMVTGDNIHTAKAIAKECGIL--TDGG-LAI--EGTD-FRSKNP--------------- 714 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~-aGi~v~m~TGD~~~ta~~iA~~~GI~--~~~~-~vi--~G~~-~~~~~~--------------- 714 (1039)
.+-++++++++.|++ .|++++++||++...+..+.+.+++. ..++ .+. .|.. ...+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445899999999998 79999999999999999988877642 1111 111 0100 000110
Q ss_pred -------------------------HHHHh-------hcccceE-----EEecCh--hhHHHHHHHHhhcCC---CEEEE
Q 001638 715 -------------------------QEMQE-------LIPKLQV-----MARSSP--TDKYILVTQLRNVFK---EVVAV 752 (1039)
Q Consensus 715 -------------------------~~~~~-------~~~~~~v-----~ar~sP--~~K~~~V~~l~~~~g---~~V~~ 752 (1039)
+.+.+ ..+...+ +....| .+|...++.+.+..| ..+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 11111 1111111 112223 478888887766544 46888
Q ss_pred EcCCccCHHHhhhC----CcceeecCCCcHHHHhccCEEeecCCchHHHHHH
Q 001638 753 TGNGTNDAPALHEA----DIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 753 ~GDG~ND~~aL~~A----dVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
+||+.||.+|++.+ +.||+|| ++. ..|++.|.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 89999999999999 9999999 654 457887764 55555444
No 86
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.55 E-value=0.00035 Score=77.48 Aligned_cols=126 Identities=17% Similarity=0.266 Sum_probs=82.0
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++.|++.++++.|+++|+++.++|+.+...+..+.+..|+....+.++.+.+... ..-.|+-=
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~----------------~Kp~p~~~ 163 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ----------------KKPDPAAL 163 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC----------------CCCCcHHH
Confidence 46799999999999999999999999999999999999998543222333222100 01111111
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc---ceeecCC-CcHHHHhccCEEeecCCchHHHHHH
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADI---GLAMGIA-GTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV---GIamgi~-gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
..+.+.+.-. .+.+.++||+.||..+.+.|++ ++..|-. ..+..+..+|+++. ++..+..++
T Consensus 164 ~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 164 LFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 2223333222 3568899999999999999997 3333322 22234567999884 476665543
No 87
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.50 E-value=0.00043 Score=73.82 Aligned_cols=124 Identities=20% Similarity=0.213 Sum_probs=84.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYI 737 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 737 (1039)
+.||+.+.++.|+++|+++.++|+.....+..+-+..|+...-..++.+.+... ....|+--..
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~Kp~p~~~~~ 146 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH----------------AKPDPEPVLK 146 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC----------------CCCCcHHHHH
Confidence 689999999999999999999999999999999999999753233333222110 1122333333
Q ss_pred HHHHHhhcCCCEEEEEcCCccCHHHhhhCCc---ceeecCCCcH-HHHhccCEEeecCCchHHHHHH
Q 001638 738 LVTQLRNVFKEVVAVTGNGTNDAPALHEADI---GLAMGIAGTE-VAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 738 ~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV---GIamgi~gt~-~ak~~aDivl~dd~f~~i~~~i 800 (1039)
+.+.+.-. ...++++||+.+|..+-++|++ |+.-|....+ .....+|+++. ++..+..++
T Consensus 147 ~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 147 ALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 44444333 3568899999999999999997 4444422222 34456888875 577777654
No 88
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.49 E-value=0.00049 Score=73.13 Aligned_cols=123 Identities=17% Similarity=0.235 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.+...+..+.+..|+...-..++.+.+... .+-.|+-=.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~p~~~~ 148 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------------RKPHPDPLL 148 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC----------------CCCChHHHH
Confidence 4799999999999999999999999999999999999998653333333222110 011122112
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee-e--cCCC-cHHHHhccCEEeecCCchHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA-M--GIAG-TEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa-m--gi~g-t~~ak~~aDivl~dd~f~~i~~ 798 (1039)
...+.+.-. .+.++++||+.+|..+.++|++-.. + |-.. .+.....+|+++. ++..+..
T Consensus 149 ~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 149 LAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred HHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 223333222 3568899999999999999997543 2 3111 1233456888875 3665543
No 89
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.41 E-value=0.001 Score=72.94 Aligned_cols=43 Identities=7% Similarity=0.008 Sum_probs=39.1
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT 698 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~ 698 (1039)
+..-+.++++|++|+++||.|++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999864
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.40 E-value=0.00068 Score=73.23 Aligned_cols=127 Identities=17% Similarity=0.185 Sum_probs=86.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...-..++.+.+.. ...-.|+-=.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC----------------CCCCCHHHHH
Confidence 468999999999999999999999999999888889899865333333333211 0112333333
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce---eecCC-Cc-HHHHhccCEEeecCCchHHHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL---AMGIA-GT-EVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI---amgi~-gt-~~ak~~aDivl~dd~f~~i~~~i~~ 802 (1039)
.+++.+.-. .+.+.|+||+.||..+-+.|++.. .-|.. .. +.....+|+++. ++..+.+.+.|
T Consensus 159 ~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~~ 226 (229)
T PRK13226 159 VAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPATW 226 (229)
T ss_pred HHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhcC
Confidence 444444433 466899999999999999998753 23321 11 223456899885 47777766554
No 91
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.38 E-value=0.0018 Score=71.01 Aligned_cols=138 Identities=12% Similarity=0.167 Sum_probs=83.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCc-ccccCCHHHHHhhcccceEEEecChhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGT-DFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~-~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
-++|||+.+.++.|+++|+++.++||-....+..+.+++|+..+...++.-. .+.. +..+.- .+.-.+ ....
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~--dGvltG-~~~P~i----~~~~ 192 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDE--DGVLKG-FKGPLI----HTFN 192 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECC--CCeEeC-CCCCcc----cccc
Confidence 4579999999999999999999999999999999999999864332221100 0000 000000 000001 1134
Q ss_pred HHHHHHH-HhhcC-----CCEEEEEcCCccCHHHhhhC---CcceeecC-CC-----cHHHHhccCEEeecCCchHHHHH
Q 001638 735 KYILVTQ-LRNVF-----KEVVAVTGNGTNDAPALHEA---DIGLAMGI-AG-----TEVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 735 K~~~V~~-l~~~~-----g~~V~~~GDG~ND~~aL~~A---dVGIamgi-~g-----t~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
|.+.+.. ..+.+ ...+.++|||.||++|..-. .--+..|- +. .+.-+++-||||.+|.=-.++..
T Consensus 193 K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~ 272 (277)
T TIGR01544 193 KNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANS 272 (277)
T ss_pred cHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHH
Confidence 5554432 22211 25678889999999996543 11222231 11 12356788999999987777665
Q ss_pred H
Q 001638 800 A 800 (1039)
Q Consensus 800 i 800 (1039)
|
T Consensus 273 i 273 (277)
T TIGR01544 273 I 273 (277)
T ss_pred H
Confidence 4
No 92
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.34 E-value=0.00063 Score=73.01 Aligned_cols=120 Identities=17% Similarity=0.229 Sum_probs=79.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.++++.|++.|+++.++|+........+.++.||..--..++.+.+.. ..+-.|+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~--- 152 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP----------------YSKPHPE--- 152 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC----------------CCCCCHH---
Confidence 578999999999999999999999999999999999999876444444333211 0111222
Q ss_pred HHHHHHhhc--CCCEEEEEcCCccCHHHhhhCCcceee---cCCCcHHHHhccCEEeecCCchHHH
Q 001638 737 ILVTQLRNV--FKEVVAVTGNGTNDAPALHEADIGLAM---GIAGTEVAKENADVIIMDDNFTTIV 797 (1039)
Q Consensus 737 ~~V~~l~~~--~g~~V~~~GDG~ND~~aL~~AdVGIam---gi~gt~~ak~~aDivl~dd~f~~i~ 797 (1039)
-+...+++. ..+.++++||..||..+-++|++.... +..+.+.-...+|+++. +|..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 222223322 025688999999999999999975433 21122222335787774 365554
No 93
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.34 E-value=0.0009 Score=81.01 Aligned_cols=39 Identities=10% Similarity=0.120 Sum_probs=36.1
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
-+.++++|++++++|+.+++.||+....+..+++++|+.
T Consensus 435 ~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 435 YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 356899999999999999999999999999999999974
No 94
>PTZ00174 phosphomannomutase; Provisional
Probab=97.28 E-value=0.0013 Score=71.81 Aligned_cols=53 Identities=21% Similarity=0.259 Sum_probs=42.1
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcC----CccCHHHhhhC-CcceeecCCCcHHHHhccCEE
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGN----GTNDAPALHEA-DIGLAMGIAGTEVAKENADVI 787 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GD----G~ND~~aL~~A-dVGIamgi~gt~~ak~~aDiv 787 (1039)
-+|..-++.|.+. .+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 3677777777766 567888899 99999999976 5778778 8888888776654
No 95
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.13 E-value=0.0031 Score=69.88 Aligned_cols=122 Identities=14% Similarity=0.180 Sum_probs=81.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.+...+..+-+.+|+...-..++.+.+.. ..|+-=.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-------------------~k~~~~~ 202 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-------------------SKRRALS 202 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-------------------CCHHHHH
Confidence 468999999999999999999999999999999999999965333333332210 0121111
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce---eecCCCc-HHHHhccCEEeecCCchHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL---AMGIAGT-EVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI---amgi~gt-~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
.+++.+.-. .+.++|+||+.+|..+-++|++-. .-|.... +.....+|+++. ++..+..++
T Consensus 203 ~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 203 QLVAREGWQ-PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 222222222 356889999999999999999743 2331211 123456899884 577777654
No 96
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.12 E-value=0.0022 Score=67.82 Aligned_cols=116 Identities=22% Similarity=0.344 Sum_probs=76.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCC--CCCCC-ceee-Cccc-cc--------------------
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGI--LTDGG-LAIE-GTDF-RS-------------------- 711 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI--~~~~~-~vi~-G~~~-~~-------------------- 711 (1039)
++.+++.+++++|++.|+++.++||+....+..+.++++. ...++ .+.. +... ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 4779999999999999999999999999999999988542 11211 1111 1000 00
Q ss_pred -C-------------------------CH---HHH----Hhhc---ccceEEE------ecCh--hhHHHHHHHHhhcCC
Q 001638 712 -K-------------------------NP---QEM----QELI---PKLQVMA------RSSP--TDKYILVTQLRNVFK 747 (1039)
Q Consensus 712 -~-------------------------~~---~~~----~~~~---~~~~v~a------r~sP--~~K~~~V~~l~~~~g 747 (1039)
. .+ .++ .... ....+.. ...| .+|...++.+.++.+
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 00 000 0000 1122221 1223 589998888876644
Q ss_pred ---CEEEEEcCCccCHHHhhhCCcceee
Q 001638 748 ---EVVAVTGNGTNDAPALHEADIGLAM 772 (1039)
Q Consensus 748 ---~~V~~~GDG~ND~~aL~~AdVGIam 772 (1039)
+.++++||+.||.+|++.|++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 4588999999999999999999998
No 97
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.09 E-value=0.0026 Score=69.57 Aligned_cols=120 Identities=15% Similarity=0.114 Sum_probs=83.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+...-..++.+.+... ..-.|+-=.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~----------------~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH----------------AKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC----------------CCCChHHHH
Confidence 4689999999999999999999999999999999999999765455555554321 122333333
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc---eeecCCCcHHHHhccCEEeecCCchH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG---LAMGIAGTEVAKENADVIIMDDNFTT 795 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG---Iamgi~gt~~ak~~aDivl~dd~f~~ 795 (1039)
...+.+.-. .+.+.|+||..+|..+-++|++- +.-|....+.....+|+++.+ +..
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~--~~e 230 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD--YED 230 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc--chh
Confidence 344444433 45688999999999999999974 322311122234568888864 444
No 98
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.09 E-value=0.003 Score=67.25 Aligned_cols=107 Identities=13% Similarity=0.088 Sum_probs=74.9
Q ss_pred CCCccHHHHHH-HHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVE-TCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~-~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++|++.+.++ .++++|++++++|+-....++.+|+..|+..... ++ |.+++.... .. ..-..|.-++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~-~~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GW-VLPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ce-EcCccCCChHH
Confidence 36999999995 7898999999999999999999999966643222 22 222221100 00 01124667889
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeec
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
...++..-....+...+=||+.||.|||+.||..++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88777553211234446699999999999999999886
No 99
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.03 E-value=0.0029 Score=67.74 Aligned_cols=126 Identities=22% Similarity=0.289 Sum_probs=82.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC--CCCCceeeCcccccCCHHHHHhhcccceEEEecChh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL--TDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~--~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
.++.||+.+.++.|++.|+++.++|+-....+..+.+.+|+. ..-..++.+.+... .+-.|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~----------------~KP~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA----------------GRPAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC----------------CCCCHH
Confidence 368999999999999999999999999999999999999987 43334444433210 111222
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeec-CCCc----HHHHhccCEEeecCCchHHHHH
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMG-IAGT----EVAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamg-i~gt----~~ak~~aDivl~dd~f~~i~~~ 799 (1039)
-=....+.+.-...+.++|+||+.+|..+-+.|++..+++ ..|. +.....+|+++. ++..+..+
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 2122222222110256899999999999999999986322 1222 122345787774 46665543
No 100
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.99 E-value=0.003 Score=69.27 Aligned_cols=96 Identities=19% Similarity=0.176 Sum_probs=66.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-CceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++.||+.+.++.|+++|+++.++|+.....+..+-+.+|+.... +.++.+.+... .+-.|+-=
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~----------------~KP~p~~~ 162 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPA----------------GRPAPWMA 162 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCC----------------CCCCHHHH
Confidence 36799999999999999999999999999999999999987532 33444333210 11122222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADI 768 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV 768 (1039)
....+.+.-...+.++|+||..+|..+-+.|++
T Consensus 163 ~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 163 LKNAIELGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred HHHHHHcCCCCchheEEECCcHHHHHHHHHCCC
Confidence 223333321002458899999999999999996
No 101
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.97 E-value=0.0037 Score=68.86 Aligned_cols=122 Identities=16% Similarity=0.188 Sum_probs=82.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.....+..+-+.+|+...-..++.+.+... ..-.|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~----------------~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR----------------GKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC----------------CCCCHHHHH
Confidence 4689999999999999999999999999999999999999765555665554321 111222222
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce-eecCCCcHHHHhccCEEeecCCchHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL-AMGIAGTEVAKENADVIIMDDNFTTIV 797 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI-amgi~gt~~ak~~aDivl~dd~f~~i~ 797 (1039)
..++.+.-. .+.++|+||..+|..+-+.|++-. ++...+.......+|+++.+ +..+.
T Consensus 173 ~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 173 YAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 333333333 356888999999999999999732 22112222233357887653 55543
No 102
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.94 E-value=0.0022 Score=67.51 Aligned_cols=94 Identities=16% Similarity=0.074 Sum_probs=68.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
.+++.++++++++.|++.|+++.++||.....+..+-+.+|+...-..++.+.+. ..+-.|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-----------------~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDC-----------------PPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCC-----------------CCCcCHHH
Confidence 3456778899999999999999999999999999999999997643344443331 11334544
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhC
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEA 766 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~A 766 (1039)
-....+.+.-. .+.++|+||+.+|..+-++|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 44555555444 45688999999999887654
No 103
>PRK11590 hypothetical protein; Provisional
Probab=96.94 E-value=0.0052 Score=65.47 Aligned_cols=106 Identities=13% Similarity=0.105 Sum_probs=74.8
Q ss_pred CCCccHHHHH-HHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAV-ETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI-~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
+++|++.+.+ +.+++.|+++.++|+-....++.+++.+|+.... .++ |.+++.. ......-..|.-+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~~--------~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQRR--------YGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEEE--------EccEECCccCCChHH
Confidence 3589999999 6788999999999999999999999999963211 122 2222110 000001123667899
Q ss_pred HHHHHHH-hhcCCCEEEEEcCCccCHHHhhhCCcceeec
Q 001638 736 YILVTQL-RNVFKEVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 736 ~~~V~~l-~~~~g~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
...++.. ... .....+=||+.||.|||+.|+-+++++
T Consensus 165 ~~~l~~~~~~~-~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTP-LRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCC-cceEEEecCCcccHHHHHhCCCCEEEC
Confidence 8877765 322 344446699999999999999999886
No 104
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.87 E-value=0.0054 Score=67.86 Aligned_cols=123 Identities=13% Similarity=0.142 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-CceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+..-. +.++.+.+.. ...|. .
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~------------------~~KP~-p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVP------------------AGRPY-P 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCC------------------CCCCC-h
Confidence 46799999999999999999999999999988888887765421 2333332211 11221 1
Q ss_pred HHHHHHHhhcC---CCEEEEEcCCccCHHHhhhCCc---ceeecCCC------------------------cHHHHhccC
Q 001638 736 YILVTQLRNVF---KEVVAVTGNGTNDAPALHEADI---GLAMGIAG------------------------TEVAKENAD 785 (1039)
Q Consensus 736 ~~~V~~l~~~~---g~~V~~~GDG~ND~~aL~~AdV---GIamgi~g------------------------t~~ak~~aD 785 (1039)
.-+.+.+++.. .+.++|+||+.+|..+-+.|++ |+.-|... .+.....+|
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~ 241 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAH 241 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCC
Confidence 22333333331 2468999999999999999996 55555210 123345688
Q ss_pred EEeecCCchHHHHHH
Q 001638 786 VIIMDDNFTTIVTVA 800 (1039)
Q Consensus 786 ivl~dd~f~~i~~~i 800 (1039)
+++. ++..+...+
T Consensus 242 ~vi~--~~~~l~~~l 254 (267)
T PRK13478 242 YVID--TIADLPAVI 254 (267)
T ss_pred eehh--hHHHHHHHH
Confidence 8885 477776655
No 105
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.78 E-value=0.014 Score=73.87 Aligned_cols=170 Identities=19% Similarity=0.262 Sum_probs=101.3
Q ss_pred HHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecc--cCCCCccHHHHHHHHHH-CCCEEEEECCCCHHH
Q 001638 610 LTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGI--KDPVRPGVREAVETCLA-AGITVRMVTGDNIHT 686 (1039)
Q Consensus 610 ~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i--~D~lR~~v~~aI~~l~~-aGi~v~m~TGD~~~t 686 (1039)
++.....|.+...|.+++- -|.|++....- ...+.+++.+++++|.+ .|+.|+++||+....
T Consensus 480 ~~~~~~~y~~~~~rLi~~D---------------~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~ 544 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLD---------------YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDT 544 (726)
T ss_pred HHHHHHHHHhccceEEEEe---------------cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHH
Confidence 3445555655556666654 34455543211 12367899999999999 699999999999999
Q ss_pred HHHHHHHcCC--CCCCCcee--eCcccccC---C--------------------------------------H-------
Q 001638 687 AKAIAKECGI--LTDGGLAI--EGTDFRSK---N--------------------------------------P------- 714 (1039)
Q Consensus 687 a~~iA~~~GI--~~~~~~vi--~G~~~~~~---~--------------------------------------~------- 714 (1039)
.+......++ ..+++..+ .|.+.... . +
T Consensus 545 l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a 624 (726)
T PRK14501 545 LERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARA 624 (726)
T ss_pred HHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHH
Confidence 9887665553 11211111 11111000 0 0
Q ss_pred HHHH----hhccc--ceEE-------EecChhhHHHHHHHHhhcC-CCEEEEEcCCccCHHHhhhC---CcceeecCCCc
Q 001638 715 QEMQ----ELIPK--LQVM-------ARSSPTDKYILVTQLRNVF-KEVVAVTGNGTNDAPALHEA---DIGLAMGIAGT 777 (1039)
Q Consensus 715 ~~~~----~~~~~--~~v~-------ar~sP~~K~~~V~~l~~~~-g~~V~~~GDG~ND~~aL~~A---dVGIamgi~gt 777 (1039)
+++. +.+.. +.+. .+..--+|...++.+.+.. ...|+++||+.||.+|++.+ ..+++|| ++
T Consensus 625 ~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~- 702 (726)
T PRK14501 625 NELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG- 702 (726)
T ss_pred HHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC-
Confidence 0111 11111 1111 1122247888888877642 25799999999999999986 5889998 53
Q ss_pred HHHHhccCEEeecCCchHHHHHHH
Q 001638 778 EVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 778 ~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
+.+|++.|.+ -..+..+++
T Consensus 703 ---~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 703 ---ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred ---CCcceEeCCC--HHHHHHHHH
Confidence 5678898875 355555543
No 106
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.75 E-value=0.003 Score=69.07 Aligned_cols=46 Identities=26% Similarity=0.331 Sum_probs=36.0
Q ss_pred hhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcceeecCCCcHH
Q 001638 733 TDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGLAMGIAGTEV 779 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ 779 (1039)
..|...|+.|+++.+ +.|.+.||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 478898988877643 34566799999999999999999999 77776
No 107
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.72 E-value=0.0075 Score=72.17 Aligned_cols=123 Identities=12% Similarity=0.118 Sum_probs=83.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcH---
Confidence 578999999999999999999999999999999999999976434444444321 112232
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc-eeecC-CCcHHHHhccCEEeecCCchHHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG-LAMGI-AGTEVAKENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG-Iamgi-~gt~~ak~~aDivl~dd~f~~i~~~i~ 801 (1039)
-+...+++...+.+.++||+.+|..+-+.|++- |.+.- .+.+.....+|+++. ++..+..++.
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 122223322135689999999999999999973 33320 222222345888875 4777766553
No 108
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.62 E-value=0.0046 Score=66.77 Aligned_cols=87 Identities=20% Similarity=0.199 Sum_probs=63.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCC----CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGD----NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD----~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
+.+++++.++.++++|+++.++|+. ...+++.+.+.+|+......++.|++... ..|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~------------------~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ------------------YQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC------------------CCC-
Confidence 3455999999999999999999998 77899999999999753333443333210 112
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADI 768 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV 768 (1039)
+|. ..+++. + .+.|+||..||..+-++|++
T Consensus 176 ~~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 176 TKT---QWIQDK-N-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred CHH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCC
Confidence 233 234444 4 47899999999999999986
No 109
>PRK11587 putative phosphatase; Provisional
Probab=96.61 E-value=0.0095 Score=63.76 Aligned_cols=115 Identities=15% Similarity=0.179 Sum_probs=73.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+.. ...++.+.+.. ...-.|+-=.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~~----------------~~KP~p~~~~ 145 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERVK----------------RGKPEPDAYL 145 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHhc----------------CCCCCcHHHH
Confidence 468999999999999999999999998877777767778743 22333332211 0111222222
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc-eeecCCCc-HHHHhccCEEeec
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG-LAMGIAGT-EVAKENADVIIMD 790 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG-Iamgi~gt-~~ak~~aDivl~d 790 (1039)
...+.+.-. .+.++|+||..+|..+-+.|++- |++. .+. ......+|+++.+
T Consensus 146 ~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 146 LGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 333333333 46789999999999999999973 4443 222 2233457777653
No 110
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.50 E-value=0.012 Score=59.59 Aligned_cols=103 Identities=20% Similarity=0.293 Sum_probs=68.2
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHH---HHHHHc---C--CCCCCCceee-CcccccCCHHHHHhhcccce
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHTAK---AIAKEC---G--ILTDGGLAIE-GTDFRSKNPQEMQELIPKLQ 725 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~---~iA~~~---G--I~~~~~~vi~-G~~~~~~~~~~~~~~~~~~~ 725 (1039)
+|.+.|++++++++++++|+++.++||++...+. ....++ | +.. +..+.. |..+..... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~~----------e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALHR----------E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhhc----------c
Confidence 5788999999999999999999999999998884 555552 3 321 122222 211111000 1
Q ss_pred EEEecChh-hHHHHHHHHhhcC----CCEEEEEcCCccCHHHhhhCCcc
Q 001638 726 VMARSSPT-DKYILVTQLRNVF----KEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 726 v~ar~sP~-~K~~~V~~l~~~~----g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
+.. ..|+ .|...++.+++.+ ...++..|++.+|+.+-++++|-
T Consensus 94 ~i~-~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 VIS-KKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccc-CCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 222 2343 4888888877632 46788889999999999877554
No 111
>PRK06769 hypothetical protein; Validated
Probab=96.39 E-value=0.014 Score=60.03 Aligned_cols=107 Identities=14% Similarity=0.010 Sum_probs=63.6
Q ss_pred CCcEeeeeecccC----CCCccHHHHHHHHHHCCCEEEEECCCCHH--------HHHHHHHHcCCCCCCCceee----Cc
Q 001638 644 NNYTLIAVVGIKD----PVRPGVREAVETCLAAGITVRMVTGDNIH--------TAKAIAKECGILTDGGLAIE----GT 707 (1039)
Q Consensus 644 ~~l~~lG~v~i~D----~lR~~v~~aI~~l~~aGi~v~m~TGD~~~--------ta~~iA~~~GI~~~~~~vi~----G~ 707 (1039)
.|.|+.|-..+.+ ++-||++++++.|++.|+++.++|+.... .+....+..|+.. .... ++
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~---~~~~~~~~~~ 87 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD---IYLCPHKHGD 87 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE---EEECcCCCCC
Confidence 4555555544443 26899999999999999999999987641 2233344556533 1100 00
Q ss_pred ccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 708 DFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+.. ..+-.|+-=...++.+.-. .+.+.|+||..+|..+-++|++-.
T Consensus 88 ~~~----------------~~KP~p~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~ 133 (173)
T PRK06769 88 GCE----------------CRKPSTGMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATT 133 (173)
T ss_pred CCC----------------CCCCCHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeE
Confidence 000 0111222223333333322 356899999999999999999743
No 112
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.32 E-value=0.018 Score=59.61 Aligned_cols=142 Identities=22% Similarity=0.284 Sum_probs=92.6
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCccccc--CCHHHHHhhcccc-----------
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRS--KNPQEMQELIPKL----------- 724 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~--~~~~~~~~~~~~~----------- 724 (1039)
+-||+.++++.+++. ....++|-.-.+-++++|..+|+...+ .--+--++++ ..+++..+++..+
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~-~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGE-LHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccc-cccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 579999999999876 566777778889999999999996421 1111111111 1111111211111
Q ss_pred -----eEEEecChhh---------------HHHHHHHHhhcC--CCEEEEEcCCccCHHHhhhCC-c-ceeecCCCcHHH
Q 001638 725 -----QVMARSSPTD---------------KYILVTQLRNVF--KEVVAVTGNGTNDAPALHEAD-I-GLAMGIAGTEVA 780 (1039)
Q Consensus 725 -----~v~ar~sP~~---------------K~~~V~~l~~~~--g~~V~~~GDG~ND~~aL~~Ad-V-GIamgi~gt~~a 780 (1039)
.+|.|..|.+ |.++++.+-+.. ....+++||++.|..||+.+. - |+|+.-||.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 1455555554 444444443321 234688999999999999885 2 477777899999
Q ss_pred HhccCEEeecCCchHHHHHHH
Q 001638 781 KENADVIIMDDNFTTIVTVAR 801 (1039)
Q Consensus 781 k~~aDivl~dd~f~~i~~~i~ 801 (1039)
...||+.+...+..+...+|.
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 999999999888887777764
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.32 E-value=0.011 Score=62.02 Aligned_cols=94 Identities=13% Similarity=0.170 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh--
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD-- 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~-- 734 (1039)
++.||+.++++.|+++|+++.++|+-+...+..+.+.+|+...-+.++...+.. ...|..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------------------~~KP~~~~ 153 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVR------------------AYKPAPQV 153 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcC------------------CCCCCHHH
Confidence 468999999999999999999999999999999999999864333333332211 122321
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
=..+.+.+.-. .+.++++||+.+|..+-++|++-
T Consensus 154 ~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 154 YQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCc
Confidence 12223333322 35688999999999999988764
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.32 E-value=0.019 Score=56.03 Aligned_cols=92 Identities=20% Similarity=0.170 Sum_probs=62.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCC--------HHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEE
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDN--------IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVM 727 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~--------~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ 727 (1039)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+... .....+ . .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~-~------------------~ 83 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VLYACP-H------------------C 83 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EEEECC-C------------------C
Confidence 3678999999999999999999999998 7788889999988531 011111 0 0
Q ss_pred EecChhhHHHHHHHHh-hcCCCEEEEEcC-CccCHHHhhhCCc
Q 001638 728 ARSSPTDKYILVTQLR-NVFKEVVAVTGN-GTNDAPALHEADI 768 (1039)
Q Consensus 728 ar~sP~~K~~~V~~l~-~~~g~~V~~~GD-G~ND~~aL~~AdV 768 (1039)
.+-.|+-=..+.+.++ -. .+.++|+|| ..+|..+-+.|++
T Consensus 84 ~KP~~~~~~~~~~~~~~~~-~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 84 RKPKPGMFLEALKRFNEID-PEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCChHHHHHHHHHcCCCC-hhheEEEcCCCcccHHHHHHCCC
Confidence 0111222123333332 22 367899999 5999999998875
No 115
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.28 E-value=0.018 Score=66.28 Aligned_cols=120 Identities=18% Similarity=0.213 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+++|+++.++|+.+...+..+-+..||..--+.++.+.+... ..-.|+-=.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~----------------~KP~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR----------------GKPDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC----------------CCCCHHHHH
Confidence 3679999999999999999999999999999999999999764444555444211 111222223
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee-ecCCCcHHH-HhccCEEeecCCchHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA-MGIAGTEVA-KENADVIIMDDNFTTI 796 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa-mgi~gt~~a-k~~aDivl~dd~f~~i 796 (1039)
...+.+.-. .+.++|+||..+|+.|-+.|++-.. +. .+.+.. ...+|+++.+ +..+
T Consensus 280 ~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 280 YAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC--HHHH
Confidence 333444333 4678899999999999999997322 22 222222 2358888743 5544
No 116
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.23 E-value=0.011 Score=63.93 Aligned_cols=86 Identities=19% Similarity=0.239 Sum_probs=62.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCC----HHHHHHHHHHcCCC--CCCCceeeCcccccCCHHHHHhhcccceEEEecC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDN----IHTAKAIAKECGIL--TDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~----~~ta~~iA~~~GI~--~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
+.|++++.++.+++.|+++.++||+. ..+++.+.+..|+. .....++.|.+. .
T Consensus 115 p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---------------------~ 173 (237)
T PRK11009 115 PKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---------------------G 173 (237)
T ss_pred chHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------C
Confidence 67889999999999999999999964 67999999999993 322222222210 1
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
..+|.. .+++. + +++++||..+|..+-++|++-
T Consensus 174 K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 174 QYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 134544 34444 4 478899999999999999873
No 117
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.20 E-value=0.012 Score=62.92 Aligned_cols=93 Identities=16% Similarity=0.165 Sum_probs=66.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh--hh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP--TD 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP--~~ 734 (1039)
++.||+.++++.|+++|+++.++|+-+...+....+.+|+...-+.++.+.+.. +..| +-
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------------------~~KP~~~~ 155 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEG------------------VEKPHPKI 155 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCC------------------CCCCCHHH
Confidence 478999999999999999999999999888888889999865333333333321 1223 21
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCc-cCHHHhhhCCc
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGT-NDAPALHEADI 768 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~-ND~~aL~~AdV 768 (1039)
=....+.+.-. .+.+.++||.. +|..+-++|++
T Consensus 156 ~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~ 189 (221)
T TIGR02253 156 FYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGM 189 (221)
T ss_pred HHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCC
Confidence 12222333222 35688999998 99999999987
No 118
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.16 E-value=0.016 Score=59.74 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=63.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.|++.+.++.|+++|+++.++|+-.... ..+..++|+...-..++.+.+.. ...-+|+-=.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 578999999999999999999999988877 66666688865333344333211 0111222223
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADI 768 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV 768 (1039)
.+.+.+.-. ...+.++||...|..+-+++++
T Consensus 148 ~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 148 LALKKLGLK-PEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHcCCC-cceEEEEcCCHHHHHHHHHcCC
Confidence 333333333 4678899999999999888876
No 119
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.14 E-value=0.0083 Score=62.07 Aligned_cols=94 Identities=11% Similarity=0.174 Sum_probs=60.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.++++.|+++|+++.++|+... +..+.+.+|+...-..++++.+.. ..+-.|+-=.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIK----------------KGKPDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcC----------------CCCCChHHHH
Confidence 5689999999999999999999997532 456778888865333444333321 0111222112
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
...+.+.-. .+.+.|+||+.+|..+-+.|++-
T Consensus 149 ~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 149 AAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCE
Confidence 222222222 24588899999999999999874
No 120
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.95 E-value=0.015 Score=65.34 Aligned_cols=108 Identities=13% Similarity=-0.023 Sum_probs=75.2
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC-CCCceeeCcccccCCHHHHHhhcccceEEEecCh
Q 001638 654 IKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT-DGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~-~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP 732 (1039)
..+++.|++.++++.|++.|+++.++||.....+..+.+.+|+.. .-.. +.|.+. ....+... --.+-.|
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~-i~~~~~-------~~~~~~~~-~~~kp~p 254 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD-LIGRPP-------DMHFQREQ-GDKRPDD 254 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh-hhCCcc-------hhhhcccC-CCCCCcH
Confidence 568999999999999999999999999999999999999999864 2111 112110 00000000 0013446
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+-+...++.+.....+.++|+||..+|+.+-+.|++-.
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 66666666553311367999999999999999998754
No 121
>PLN02940 riboflavin kinase
Probab=95.94 E-value=0.018 Score=67.15 Aligned_cols=116 Identities=14% Similarity=0.126 Sum_probs=73.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH-HcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAK-ECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~-~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++.||+.+.++.|++.|+++.++|+.....+...-+ ..|+...-+.++.+.+.. ...-.|+-=
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~----------------~~KP~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE----------------KGKPSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC----------------CCCCCHHHH
Confidence 367999999999999999999999999888877665 678765434444443321 011122222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce-eecC-CCcHHHHhccCEEee
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL-AMGI-AGTEVAKENADVIIM 789 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI-amgi-~gt~~ak~~aDivl~ 789 (1039)
...++.+.-. .+.+.|+||+.+|..+-+.|++.. .+.- ...+.....+|.++.
T Consensus 157 ~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 157 LEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN 211 (382)
T ss_pred HHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC
Confidence 2333333323 456888999999999999999753 2221 122223345666654
No 122
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.93 E-value=0.021 Score=60.97 Aligned_cols=119 Identities=14% Similarity=0.103 Sum_probs=76.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh--
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD-- 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~-- 734 (1039)
++.||+.+.++.|++. +++.++|+-....+..+.+++|+..--+.++.+.+.. ...|..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------------------~~KP~~~~ 157 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAG------------------IQKPDKEI 157 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccC------------------CCCCCHHH
Confidence 4689999999999999 9999999999999999999999965333333332211 112321
Q ss_pred HHHHHHHH-hhcCCCEEEEEcCCc-cCHHHhhhCCc---ceeecCCCcHHHHhccCEEeecCCchHHHH
Q 001638 735 KYILVTQL-RNVFKEVVAVTGNGT-NDAPALHEADI---GLAMGIAGTEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 735 K~~~V~~l-~~~~g~~V~~~GDG~-ND~~aL~~AdV---GIamgi~gt~~ak~~aDivl~dd~f~~i~~ 798 (1039)
=...++.+ .-. .+.++++||+. +|..+-+.+++ ++..| ...+.....+|+++. ++..+..
T Consensus 158 ~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~-~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPD-MHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCC-CCCCCCCCCCceEEC--CHHHHHh
Confidence 12333333 222 35688999998 89999999996 33323 122122235677764 4665554
No 123
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.92 E-value=0.05 Score=56.37 Aligned_cols=126 Identities=15% Similarity=0.093 Sum_probs=69.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCH---------------HHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcc
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNI---------------HTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIP 722 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~ 722 (1039)
+.||+.++++.|++.|+++.++|..+. .....+-+..|+.-+ .++.......
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~~----------- 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHPE----------- 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCCC-----------
Confidence 589999999999999999999998763 112223344555211 1111000000
Q ss_pred cceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecC-CCc--H-HHHhcc--CEEeecCCchHH
Q 001638 723 KLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGI-AGT--E-VAKENA--DVIIMDDNFTTI 796 (1039)
Q Consensus 723 ~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi-~gt--~-~ak~~a--Divl~dd~f~~i 796 (1039)
...-..+-.|+--....+.+.-. .+.++|+||+.+|..+-+.|++. +++. .|. + .....+ |+++. ++..+
T Consensus 97 ~~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~ii~--~l~el 172 (181)
T PRK08942 97 DGCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWVLD--SLADL 172 (181)
T ss_pred CCCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCceeec--CHHHH
Confidence 00000112233333344444333 46788999999999999999973 2221 222 1 122335 77774 47666
Q ss_pred HHHH
Q 001638 797 VTVA 800 (1039)
Q Consensus 797 ~~~i 800 (1039)
..++
T Consensus 173 ~~~l 176 (181)
T PRK08942 173 PQAL 176 (181)
T ss_pred HHHH
Confidence 6654
No 124
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.90 E-value=0.022 Score=57.35 Aligned_cols=100 Identities=20% Similarity=0.202 Sum_probs=72.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcC----CCCC----CC--ceeeCcccccCCHHHHHhhcccceE
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECG----ILTD----GG--LAIEGTDFRSKNPQEMQELIPKLQV 726 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G----I~~~----~~--~vi~G~~~~~~~~~~~~~~~~~~~v 726 (1039)
.++|+.++.++.+++.+++++++|+-...-...+-...+ |... ++ .-.+|.-.- +
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i---------------~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSI---------------K 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceee---------------e
Confidence 369999999999999999999999988888888777666 3210 00 011111110 1
Q ss_pred EEecC--hhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceee
Q 001638 727 MARSS--PTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAM 772 (1039)
Q Consensus 727 ~ar~s--P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIam 772 (1039)
....+ --+|...|+.+++. .+.+.++|||+.|..|-+.+|+=+|-
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cCCccccCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhhH
Confidence 11111 24899999999998 78899999999999999999988753
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.84 E-value=0.014 Score=60.36 Aligned_cols=92 Identities=15% Similarity=0.207 Sum_probs=61.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH-
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK- 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K- 735 (1039)
++.||+.+.++.|+++|+++.++|+. ..+..+-+.+|+..--..++.+.+.. +..|...
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~------------------~~kp~~~~ 147 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVK------------------EGKPHPET 147 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCC------------------CCCCChHH
Confidence 57999999999999999999999987 66777888889864322333222211 1223211
Q ss_pred -HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 736 -YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 736 -~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
....+.+.-. .+.+.++||+.+|..+-+.|++.
T Consensus 148 ~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 148 FLLAAELLGVS-PNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCe
Confidence 1222222222 35578899999999999999874
No 126
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.77 E-value=0.031 Score=60.16 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=66.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh--hh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP--TD 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP--~~ 734 (1039)
++.||+.+.++.|+++|+++.++|+-+...+...-+..|+..--..++.+.++. +..| +-
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~------------------~~KP~p~~ 154 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFG------------------YPKEDQRL 154 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCC------------------CCCCCHHH
Confidence 568999999999999999999999999888888888888865333333332221 1122 11
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
=....+.+.-. .+.++++||..+|..+-+.|++..
T Consensus 155 ~~~~~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 155 WQAVAEHTGLK-AERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCeE
Confidence 11222223222 356889999999999999999863
No 127
>PLN02580 trehalose-phosphatase
Probab=95.76 E-value=0.1 Score=60.19 Aligned_cols=63 Identities=16% Similarity=0.142 Sum_probs=46.4
Q ss_pred hhHHHHHHHHhhcCC-----C-EEEEEcCCccCHHHhhh-----CCcceeecCCCcHHHHhccCEEeecCCchHHHHHH
Q 001638 733 TDKYILVTQLRNVFK-----E-VVAVTGNGTNDAPALHE-----ADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g-----~-~V~~~GDG~ND~~aL~~-----AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i 800 (1039)
-+|...|+.+.+..| . .++++||+.||..||+. +++||+|| +|... ..|++.|.+ -..+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHH
Confidence 389988888876644 1 25899999999999996 68999999 65542 257888764 55555554
No 128
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.69 E-value=0.02 Score=58.03 Aligned_cols=97 Identities=24% Similarity=0.277 Sum_probs=68.6
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++.|++.+.++.|++.|++++++|+..........+.+|+...-+.++...+.... .-.|+-=
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~----------------Kp~~~~~ 139 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR----------------KPDPDAY 139 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS----------------TTSHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh----------------hhHHHHH
Confidence 346899999999999999999999999999999999999987433344333332211 0112222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
..+++.+.-. .+.+.++||+..|..+-++|++-
T Consensus 140 ~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 140 RRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCe
Confidence 2333334333 46688999999999999988764
No 129
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.65 E-value=0.043 Score=56.40 Aligned_cols=114 Identities=15% Similarity=0.133 Sum_probs=73.0
Q ss_pred CcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhccc
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGD-NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPK 723 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD-~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~ 723 (1039)
+.......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+...+... .+...+..
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~------------~~~~~Fd~ 100 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV------------PMHSLFDD 100 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc------------cHHHhcee
Confidence 33455566666788999999999999999999999976 899999999999986211000 00000100
Q ss_pred ceEEEecChhhH--HHHHHHHhhcC-----CCEEEEEcCCccCHHHhhhCCccee
Q 001638 724 LQVMARSSPTDK--YILVTQLRNVF-----KEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 724 ~~v~ar~sP~~K--~~~V~~l~~~~-----g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
+ +.+...+..| ..+.+.+.+.. .+.++|+||...|+.+-++|++-..
T Consensus 101 i-v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 101 R-IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred e-eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 0 1111111112 23344443321 3568999999999999999987553
No 130
>PRK09449 dUMP phosphatase; Provisional
Probab=95.62 E-value=0.041 Score=58.96 Aligned_cols=122 Identities=13% Similarity=0.129 Sum_probs=76.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.+.++.|+ +|+++.++|......+...-+.+|+...-+.++.+.+.. ...|. ..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~------------------~~KP~-p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVG------------------VAKPD-VA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccC------------------CCCCC-HH
Confidence 36899999999999 689999999999988888888889865323333322211 11232 11
Q ss_pred HHHHHHhhcC---CCEEEEEcCCc-cCHHHhhhCCcc-eeecCCCcH-HHHhccCEEeecCCchHHHHHH
Q 001638 737 ILVTQLRNVF---KEVVAVTGNGT-NDAPALHEADIG-LAMGIAGTE-VAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 737 ~~V~~l~~~~---g~~V~~~GDG~-ND~~aL~~AdVG-Iamgi~gt~-~ak~~aDivl~dd~f~~i~~~i 800 (1039)
-+...+++.. .+.+.++||+. +|..+-+.|++- |.....+.+ .....+|+++. ++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 2222333220 24689999998 799999999974 333211211 11124788774 477766554
No 131
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.28 E-value=0.055 Score=60.51 Aligned_cols=116 Identities=19% Similarity=0.195 Sum_probs=71.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCC--ceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGG--LAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~--~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
++.||+.+.++.|++.|+++.++|+-+......+-+..+...-.. .++.+.+.. ...-.|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 478999999999999999999999998888877766553221100 111222210 01112222
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCc--HHHHhccCEEee
Q 001638 735 KYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGT--EVAKENADVIIM 789 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt--~~ak~~aDivl~ 789 (1039)
=..+.+.+.-. .+.++|+||+.+|..+-++|++....-..|. ......+|+++.
T Consensus 208 ~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 208 YNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 22333333333 3568899999999999999997554322322 111235788874
No 132
>PLN02811 hydrolase
Probab=94.93 E-value=0.065 Score=57.39 Aligned_cols=96 Identities=15% Similarity=0.208 Sum_probs=58.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHH-HHHHcCCCCCCCceeeCc--ccccCCHHHHHhhcccceEEEecChh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKA-IAKECGILTDGGLAIEGT--DFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~-iA~~~GI~~~~~~vi~G~--~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
++.||+.+.++.|+++|+++.++||-....... ..+..|+......++.+. +.. ...-.|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhcc----------------CCCCCcH
Confidence 468999999999999999999999987654432 222234432222233332 110 0011222
Q ss_pred hHHHHHHHHh---hcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 734 DKYILVTQLR---NVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 734 ~K~~~V~~l~---~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
-=...++.+. -. .+.+.|+||+..|+.+-+.|++-
T Consensus 142 ~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 142 IFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred HHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCe
Confidence 2223333332 11 35689999999999999999974
No 133
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.87 E-value=0.064 Score=53.74 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=57.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYI 737 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 737 (1039)
..||+.+.++.|++.|+++.++|+-....+....+.. +......++...+ +...-.|+-=..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~~Kp~~~~~~~ 126 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FGAKPEPEIFLA 126 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CCCCcCHHHHHH
Confidence 4589999999999999999999999999988887775 4322112211111 111112222122
Q ss_pred HHHHHhhcCCCEEEEEcCCccCHHHhhhCC
Q 001638 738 LVTQLRNVFKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 738 ~V~~l~~~~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
+.+.+.-. . .++++||..+|..+-++|+
T Consensus 127 ~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 127 ALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 22223222 3 6899999999999887764
No 134
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.66 E-value=0.077 Score=55.90 Aligned_cols=92 Identities=14% Similarity=0.202 Sum_probs=59.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++-||+.++++.|+++|+++.++|+-... .....+.+|+...-+.++...+.. ...|. ..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~------------------~~KP~-~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG------------------AEKPD-PK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC------------------CCCCC-HH
Confidence 46899999999999999999999986654 467778888854322222222211 01222 11
Q ss_pred HHHHHHhhc--CCCEEEEEcCCc-cCHHHhhhCCc
Q 001638 737 ILVTQLRNV--FKEVVAVTGNGT-NDAPALHEADI 768 (1039)
Q Consensus 737 ~~V~~l~~~--~g~~V~~~GDG~-ND~~aL~~AdV 768 (1039)
-+...+++. ..+.++++||+. +|..+-++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 222223332 035689999997 89998888865
No 135
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.52 E-value=0.093 Score=53.88 Aligned_cols=85 Identities=24% Similarity=0.274 Sum_probs=60.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDN-IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD 734 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~-~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 734 (1039)
..+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ......|..
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p 94 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPG 94 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCCh
Confidence 3578999999999999999999999988 677888888888742 111122321
Q ss_pred HHHHHHHHhhc--CCCEEEEEcCCc-cCHHHhhhCCc
Q 001638 735 KYILVTQLRNV--FKEVVAVTGNGT-NDAPALHEADI 768 (1039)
Q Consensus 735 K~~~V~~l~~~--~g~~V~~~GDG~-ND~~aL~~AdV 768 (1039)
. .+...+++. ..+.++|+||.. .|..+-+.|++
T Consensus 95 ~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 95 C-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred H-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 1 222223322 035589999998 79999999987
No 136
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.48 E-value=0.23 Score=51.58 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=33.9
Q ss_pred cHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Q 001638 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 661 ~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678899999999999999999999999999999987
No 137
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.23 E-value=0.18 Score=52.00 Aligned_cols=27 Identities=22% Similarity=0.246 Sum_probs=24.5
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNI 684 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~ 684 (1039)
+.||+.++++.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999999999998663
No 138
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=94.13 E-value=0.31 Score=62.39 Aligned_cols=50 Identities=16% Similarity=0.135 Sum_probs=37.3
Q ss_pred CcEeeeeecccCCCCccHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHc
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETC-LAAGITVRMVTGDNIHTAKAIAKEC 694 (1039)
Q Consensus 645 ~l~~lG~v~i~D~lR~~v~~aI~~l-~~aGi~v~m~TGD~~~ta~~iA~~~ 694 (1039)
|.|++-.....-.+-|++.+++++| ++.|+.|.++||+...+....-..+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4455433322335668999999996 7889999999999999998877543
No 139
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.12 E-value=0.11 Score=55.95 Aligned_cols=112 Identities=16% Similarity=0.193 Sum_probs=73.6
Q ss_pred CCCccHHHHHHHH--HHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcc-cceEEEecCh-
Q 001638 657 PVRPGVREAVETC--LAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIP-KLQVMARSSP- 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l--~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~-~~~v~ar~sP- 732 (1039)
|+.|+.+++++.| ++.|+.+.++|--|..--..|-+.-|+...-..+.+.+..-+-.. ...+-+ ...-+.+|.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G--~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG--RLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc--eEEEeCccCCCCCcCCCc
Confidence 6789999999999 568999999999999999999999998754333333322111000 000000 0012335554
Q ss_pred hhHHHHHHHHhhc---CC---CEEEEEcCCccCHHHh---hhCCcce
Q 001638 733 TDKYILVTQLRNV---FK---EVVAVTGNGTNDAPAL---HEADIGL 770 (1039)
Q Consensus 733 ~~K~~~V~~l~~~---~g---~~V~~~GDG~ND~~aL---~~AdVGI 770 (1039)
.-|..+++.+++. .| ..|.++|||.||-... +.+|+-.
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 4799999888654 13 6899999999997643 3455544
No 140
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.12 E-value=0.066 Score=53.62 Aligned_cols=92 Identities=14% Similarity=0.006 Sum_probs=64.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-CceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ..++.+.+... ..|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~------------------~KP~-- 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF------------------VKGK-- 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc------------------cCCe--
Confidence 57999999999999 57999999999999999999999885321 33344333211 1121
Q ss_pred HHHHHHHhhc--CCCEEEEEcCCccCHHHhhhCCccee
Q 001638 736 YILVTQLRNV--FKEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 736 ~~~V~~l~~~--~g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
+.+.++.. ..+.+.++||..+|..+-++|.|-|.
T Consensus 104 --~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 --YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred --EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 33333322 14678899999999998888866553
No 141
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.09 E-value=0.36 Score=48.36 Aligned_cols=110 Identities=17% Similarity=0.251 Sum_probs=77.8
Q ss_pred HHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Q 001638 614 INGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE 693 (1039)
Q Consensus 614 i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~ 693 (1039)
.+.+..+|++++.+- ++ -|+++.= ....-|++++-++.++.+|+++.++|.-++..+...+..
T Consensus 20 ~~~L~~~Gikgvi~D---lD------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 20 PDILKAHGIKGVILD---LD------------NTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred HHHHHHcCCcEEEEe---cc------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence 456788999998764 22 2333221 234678999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhc--CCCEEEEEcCCc-cCHHHhhhCCc
Q 001638 694 CGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNV--FKEVVAVTGNGT-NDAPALHEADI 768 (1039)
Q Consensus 694 ~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~--~g~~V~~~GDG~-ND~~aL~~AdV 768 (1039)
+|+.- ++--..|-.+ .+-+++++. ..+.|+|+||.. .|+-+=+.|++
T Consensus 83 l~v~f---------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 83 LGVPF---------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred cCCce---------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 99975 3333345443 455555554 146799999984 47766555543
No 142
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.92 E-value=0.33 Score=52.86 Aligned_cols=94 Identities=16% Similarity=0.189 Sum_probs=60.1
Q ss_pred eeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHH--HHHHHcCCCC-CCCceeeCcccccCCHHHHHhhcccceE
Q 001638 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAK--AIAKECGILT-DGGLAIEGTDFRSKNPQEMQELIPKLQV 726 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~--~iA~~~GI~~-~~~~vi~G~~~~~~~~~~~~~~~~~~~v 726 (1039)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+.. ....+++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~----------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEI----------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHH-----------------
Confidence 344445678999999999999999999999986654444 5668889864 22222221110
Q ss_pred EEecChhhHHHHHHHHhhc--CCCEEEEEcCCccCHHHhhhCC
Q 001638 727 MARSSPTDKYILVTQLRNV--FKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 727 ~ar~sP~~K~~~V~~l~~~--~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
...-+.+.+++. .+..+.++||+.+|...+..++
T Consensus 80 -------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 011122222221 1456899999999998886443
No 143
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.89 E-value=0.31 Score=53.63 Aligned_cols=87 Identities=11% Similarity=0.134 Sum_probs=60.0
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHH---HHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecC
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIH---TAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
..++-||+.+.++.+++.|+++.++|+.... .+...-+..|+...... .++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d----------------------~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE----------------------HLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc----------------------eEEeCCC
Confidence 3457899999999999999999999998743 34455667888541100 1333322
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhh
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPALH 764 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~ 764 (1039)
...|..-.+.+.+. -++++++||-.+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 33455555566555 578999999999986543
No 144
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.84 E-value=0.12 Score=51.63 Aligned_cols=96 Identities=24% Similarity=0.291 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCH---------------HHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhc
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNI---------------HTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELI 721 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~ 721 (1039)
++.||+.++++.|+++|+++.++|..+. ..+..+.+.+|+... .. ..+......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~-~~~~~~~~~--------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GV-LFCPHHPAD--------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EE-EECCCCCCC---------
Confidence 4689999999999999999999998762 455667778887521 00 000000000
Q ss_pred ccceEEEecChhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcc
Q 001638 722 PKLQVMARSSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 722 ~~~~v~ar~sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
.... ..| +.++.+...+..| +.+.|+||...|..+-+.|++-
T Consensus 96 ---~~~~-~KP--~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 96 ---NCSC-RKP--KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ---CCCC-CCC--CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 0000 123 2223333222213 5689999999999999988764
No 145
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.71 E-value=0.099 Score=48.72 Aligned_cols=89 Identities=22% Similarity=0.235 Sum_probs=55.4
Q ss_pred eeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHH---HHcCCCCCCCceeeCcccccCCHHHHHhhcccceE
Q 001638 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIA---KECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQV 726 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v 726 (1039)
|++...+.+=||+.++++.|+++|++++++|.....+...++ +.+|+..+.+. +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-----------------------i 63 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-----------------------I 63 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-----------------------E
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-----------------------E
Confidence 556667888999999999999999999999998755544444 66888653222 2
Q ss_pred EEecChhhHHHHHHHHhh-cCCCEEEEEcCCccCHHHhhhCC
Q 001638 727 MARSSPTDKYILVTQLRN-VFKEVVAVTGNGTNDAPALHEAD 767 (1039)
Q Consensus 727 ~ar~sP~~K~~~V~~l~~-~~g~~V~~~GDG~ND~~aL~~Ad 767 (1039)
+. |. ....+.|++ ..+..|.++|.. .....++.++
T Consensus 64 ~t---s~--~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 64 IT---SG--MAAAEYLKEHKGGKKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp EE---HH--HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTT
T ss_pred EC---hH--HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcC
Confidence 22 11 123344444 336788888865 5555666554
No 146
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=93.71 E-value=0.17 Score=66.52 Aligned_cols=135 Identities=13% Similarity=0.153 Sum_probs=85.0
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC-CCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL-TDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~-~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
+-||+.+.++.|+++|+++.++|+-....+..+-+..|+. ..-+.++.+.+... ..-.|+-=.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~----------------~KP~Pe~~~ 225 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN----------------LKPAPDIFL 225 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc----------------CCCCHHHHH
Confidence 5799999999999999999999999999999998999985 22233444433211 111222222
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc---ceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHH
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEADI---GLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYIN 809 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV---GIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~n 809 (1039)
...+.+.-. .+.+.++||..+|+.+-+.|++ ++.-+....+.....+|+++.+-.--++..++..|-..+.|
T Consensus 226 ~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~ 300 (1057)
T PLN02919 226 AAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATPN 300 (1057)
T ss_pred HHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCCC
Confidence 333333333 4568889999999999999986 33223222233455788888653222344455444444443
No 147
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.27 E-value=0.32 Score=52.11 Aligned_cols=89 Identities=15% Similarity=0.099 Sum_probs=58.2
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecC
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIHT---AKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~t---a~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
+-|.-|++.++++.+++.|++|+++||+.... +..--++.|+..-..+++-+.+-.. ...
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~-----------------~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSN-----------------KTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCC-----------------chH
Confidence 35788999999999999999999999999765 3333345677642233332211000 001
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCH
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDA 760 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~ 760 (1039)
-+-|...-+.+.+..-++++.+||-.+|.
T Consensus 181 ~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 11266666666655247899999999987
No 148
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.26 E-value=0.22 Score=57.09 Aligned_cols=98 Identities=23% Similarity=0.172 Sum_probs=60.2
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCC---------------CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGD---------------NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQEL 720 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD---------------~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~ 720 (1039)
-++.|++.++++.|+++|+++.++|+- ....+..+.+..|+.. ....+.. ... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~-~~~--sd------ 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICP-HFP--ED------ 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeC-CcC--cc------
Confidence 357999999999999999999999983 2344666777777742 1111110 000 00
Q ss_pred cccceEEEecChhhHHHHHHHHhhcC---CCEEEEEcCCccCHHHhhhCCcce
Q 001638 721 IPKLQVMARSSPTDKYILVTQLRNVF---KEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 721 ~~~~~v~ar~sP~~K~~~V~~l~~~~---g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+ ..+| .| |..++..+.++. ...+.|+||+.+|..+-+.|++-.
T Consensus 99 --~--~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 --N--CSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred --c--CCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 0 0011 22 233343332221 367899999999999999998753
No 149
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.76 E-value=0.19 Score=51.17 Aligned_cols=97 Identities=20% Similarity=0.135 Sum_probs=59.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCC---------------CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhc
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGD---------------NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELI 721 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD---------------~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~ 721 (1039)
++-||+.++++.|+++|+++.++|.- ....+..+.+.+|+.- ..++-+..+.. +
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f--d~ii~~~~~~~--~------- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF--DDVLICPHFPD--D------- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce--eEEEECCCCCC--C-------
Confidence 45789999999999999999999984 2456677778888841 11111100000 0
Q ss_pred ccceEEEecChhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcce
Q 001638 722 PKLQVMARSSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 722 ~~~~v~ar~sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
.+.. ..| |..++..+.+..+ +.+.|+||+.+|..+-+.|++-.
T Consensus 98 ---~~~~-~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 98 ---NCDC-RKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred ---CCCC-CCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 0001 122 2233333322212 45889999999999999998754
No 150
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=92.40 E-value=0.34 Score=49.56 Aligned_cols=92 Identities=11% Similarity=0.083 Sum_probs=57.0
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHH------------HHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccce
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIH------------TAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQ 725 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~------------ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 725 (1039)
+-||+.++++.|+++|+++.++|.-+.. .+..+.+.+|+.. ..++.+.+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~---------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAG---------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCC----------------
Confidence 4599999999999999999999975542 4566778888843 122222110
Q ss_pred EEEecChhh--HHHHHHHHh--hcCCCEEEEEcCCc--------cCHHHhhhCCcce
Q 001638 726 VMARSSPTD--KYILVTQLR--NVFKEVVAVTGNGT--------NDAPALHEADIGL 770 (1039)
Q Consensus 726 v~ar~sP~~--K~~~V~~l~--~~~g~~V~~~GDG~--------ND~~aL~~AdVGI 770 (1039)
..| .|.. =..+.+.+. -. .+.+.|+||.. +|..+-++|++-.
T Consensus 105 -~~~-KP~p~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 -LYR-KPMTGMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred -CCC-CCccHHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 001 2211 112222222 11 25689999986 6999888887654
No 151
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.31 E-value=0.15 Score=54.10 Aligned_cols=97 Identities=14% Similarity=0.123 Sum_probs=55.5
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHH--HHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHT--AKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT 733 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~t--a~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~ 733 (1039)
-++.|++.+.++.|+++|+++.++|...... ........|+...-+.++...+.. ...-.|+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~----------------~~KP~p~ 156 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEG----------------LRKPDPR 156 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecC----------------CCCCCHH
Confidence 3578999999999999999999999875433 222222334432111111111100 0011122
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
-=....+.+.-. .+.++|+||...|..+-++|++-
T Consensus 157 ~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 157 IYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCE
Confidence 212222333322 35577889999999999999874
No 152
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.18 E-value=0.45 Score=50.97 Aligned_cols=97 Identities=13% Similarity=0.167 Sum_probs=62.9
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcC---CCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECG---ILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G---I~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP 732 (1039)
-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +..- +...+. ..+...-.|
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-----------------f~~~fd-~~~g~KP~p 155 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-----------------FSGYFD-TTVGLKTEA 155 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-----------------cceEEE-eCcccCCCH
Confidence 4689999999999999999999999998887777665542 2110 000111 001111222
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
+-=..+.+.+.-. .+.++++||...|+.+-++|++-..
T Consensus 156 ~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 156 QSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 2223333444333 3568999999999999999998543
No 153
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.01 E-value=0.37 Score=46.95 Aligned_cols=39 Identities=15% Similarity=0.196 Sum_probs=35.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHcC
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGD-NIHTAKAIAKECG 695 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD-~~~ta~~iA~~~G 695 (1039)
++.||+.+.++.|+++|+++.++|+. ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7887877777776
No 154
>PLN03017 trehalose-phosphatase
Probab=91.98 E-value=2 Score=49.31 Aligned_cols=47 Identities=21% Similarity=0.209 Sum_probs=37.9
Q ss_pred CCcEeeeeecccC--CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
Q 001638 644 NNYTLIAVVGIKD--PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIA 691 (1039)
Q Consensus 644 ~~l~~lG~v~i~D--~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA 691 (1039)
-|.||+-++.-.| .+-++..++|++|. .|+.|.++||+.......+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 3567766665333 47799999999999 78999999999999999874
No 155
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.80 E-value=0.27 Score=53.58 Aligned_cols=71 Identities=15% Similarity=0.100 Sum_probs=51.9
Q ss_pred EEEecChhhHHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhC--------CcceeecCCCcHHHHhccCEEeecCCch
Q 001638 726 VMARSSPTDKYILVTQLRNVFK---EVVAVTGNGTNDAPALHEA--------DIGLAMGIAGTEVAKENADVIIMDDNFT 794 (1039)
Q Consensus 726 v~ar~sP~~K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~A--------dVGIamgi~gt~~ak~~aDivl~dd~f~ 794 (1039)
+-.+..+.+|...++.+.+..+ ..++++||+.||.+|++.+ ..|++|+ .| ..+..|++++. +..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHH
Confidence 3445567789998888766534 4689999999999999999 4788885 33 24567899886 466
Q ss_pred HHHHHHH
Q 001638 795 TIVTVAR 801 (1039)
Q Consensus 795 ~i~~~i~ 801 (1039)
.+...++
T Consensus 234 ~v~~~L~ 240 (244)
T TIGR00685 234 QVLEFLG 240 (244)
T ss_pred HHHHHHH
Confidence 6665553
No 156
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=91.71 E-value=0.2 Score=53.59 Aligned_cols=95 Identities=12% Similarity=0.132 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCC-CceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG-GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~-~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++.||+.++++.| ++++.++|+.....+...-+.+|+...- ..++++.+... .+-.|+-=
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~----------------~KP~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR----------------WKPDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC----------------CCCChHHH
Confidence 3568999999998 4999999999988888888888886532 13333332110 01122222
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCccee
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLA 771 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIa 771 (1039)
....+.+.-. .+.++|+||..+|..+-++|++...
T Consensus 149 ~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 149 FHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2223333222 3568899999999999999997664
No 157
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.34 E-value=0.75 Score=46.92 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=62.2
Q ss_pred cCCCCccHHHHHHHHHHCCC--EEEEECCC-------CHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccce
Q 001638 655 KDPVRPGVREAVETCLAAGI--TVRMVTGD-------NIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQ 725 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi--~v~m~TGD-------~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 725 (1039)
++.+-|+..+.+++|++.+. +|.++|-- +...|+++++.+||.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 57788999999999999987 49999987 4899999999999852
Q ss_pred E-EEecChhhHHHHHHHHhhc----CCCEEEEEcCCc-cCHHHhh
Q 001638 726 V-MARSSPTDKYILVTQLRNV----FKEVVAVTGNGT-NDAPALH 764 (1039)
Q Consensus 726 v-~ar~sP~~K~~~V~~l~~~----~g~~V~~~GDG~-ND~~aL~ 764 (1039)
+ +....|.-..++.+.++.+ ..+.++|+||-. -|.-+=.
T Consensus 110 l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN 154 (168)
T PF09419_consen 110 LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGN 154 (168)
T ss_pred EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhh
Confidence 2 2234686666777777643 145699999973 3554433
No 158
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=90.98 E-value=0.58 Score=53.25 Aligned_cols=91 Identities=9% Similarity=0.061 Sum_probs=68.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH----cCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE----CGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~----~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP 732 (1039)
++.+++.++++.|+++|+++.++|.-+...|..+-+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4578999999999999999999999999999999888 7775311 1112223
Q ss_pred hhHHHHHHHHhhcC---CCEEEEEcCCccCHHHhhhCCcceee
Q 001638 733 TDKYILVTQLRNVF---KEVVAVTGNGTNDAPALHEADIGLAM 772 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~---g~~V~~~GDG~ND~~aL~~AdVGIam 772 (1039)
..|...++.+.+.. ...++|+||...|..+.+.+...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 44555555543332 36788999999999999998887644
No 159
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=90.85 E-value=0.52 Score=49.51 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=56.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh--
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE-CGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT-- 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~-- 733 (1039)
++.||+.++++.|+++|+++.++|.-+.......-.. .|+...-+.++...+.. ...|.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~------------------~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLG------------------MRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccC------------------CCCCCHH
Confidence 4689999999999999999999999876654433222 23322111122111110 11221
Q ss_pred hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 734 DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 734 ~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
-=....+.+.-. .+.+.++||...|..+-++|++-
T Consensus 146 ~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~ 180 (199)
T PRK09456 146 IYQHVLQAEGFS-AADAVFFDDNADNIEAANALGIT 180 (199)
T ss_pred HHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCE
Confidence 112223333322 35688999999999999988874
No 160
>PLN02423 phosphomannomutase
Probab=89.96 E-value=2.1 Score=46.67 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=28.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKA 689 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~ 689 (1039)
.++.+...++|++|++. ++++++||+.......
T Consensus 23 ~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~ 55 (245)
T PLN02423 23 KEATPEMLEFMKELRKV-VTVGVVGGSDLSKISE 55 (245)
T ss_pred CcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHH
Confidence 35788999999999987 9999999998776644
No 161
>PLN02645 phosphoglycolate phosphatase
Probab=89.89 E-value=0.73 Score=52.19 Aligned_cols=48 Identities=19% Similarity=0.265 Sum_probs=38.2
Q ss_pred eecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHH---HHcCCCC
Q 001638 651 VVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIA---KECGILT 698 (1039)
Q Consensus 651 ~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~GI~~ 698 (1039)
++.-.+.+=|++.++++.|++.|++++++|+....+...++ +++|+..
T Consensus 38 tl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 38 VIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 33334556699999999999999999999999977766666 5678754
No 162
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=89.76 E-value=1.2 Score=44.83 Aligned_cols=106 Identities=21% Similarity=0.265 Sum_probs=70.9
Q ss_pred eecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHH---HHc-----CCCCCCCceeeCcc--cccCCHHHHHhh
Q 001638 651 VVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIA---KEC-----GILTDGGLAIEGTD--FRSKNPQEMQEL 720 (1039)
Q Consensus 651 ~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~-----GI~~~~~~vi~G~~--~~~~~~~~~~~~ 720 (1039)
++|- |-.++++.+.++.+++.|+++..+|+++.--+...- .+. ++. .+.++.-++ +..+..
T Consensus 22 ~~G~-d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~~l~~al~r------ 92 (157)
T PF08235_consen 22 ILGK-DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPDSLFSALHR------ 92 (157)
T ss_pred ccCc-hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCcchhhhhhc------
Confidence 3443 789999999999999999999999999976654432 222 332 222222211 100110
Q ss_pred cccceEEEecChhhHHHHHHHHhhc----CCCEEEEEcCCccCHHHhhhCCcc
Q 001638 721 IPKLQVMARSSPTDKYILVTQLRNV----FKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 721 ~~~~~v~ar~sP~~K~~~V~~l~~~----~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
.+..+-.-+.|...++.++.. ....++..|...+|+.+-++++|-
T Consensus 93 ----Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ----EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ----cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 145555567898889888865 246788889999999999877654
No 163
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=88.63 E-value=0.64 Score=48.57 Aligned_cols=121 Identities=18% Similarity=0.225 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHHCCC-EEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcc--cceEEEecCh-
Q 001638 657 PVRPGVREAVETCLAAGI-TVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIP--KLQVMARSSP- 732 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi-~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~--~~~v~ar~sP- 732 (1039)
|.-|+..++|+.+++.|- .++++|--|.--...+-+..||..--..+.+.+..-+.+.. + .+.+ .-.-+.+|-|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~-L-~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGR-L-LVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCc-E-EeecCCCCCccCcCchh
Confidence 678999999999999996 99999999998888888888875411011111100000000 0 0000 0012233322
Q ss_pred hhHHHHHHHHhhcC------CCEEEEEcCCccCH-HHhhhCCcceeecCCCcHH
Q 001638 733 TDKYILVTQLRNVF------KEVVAVTGNGTNDA-PALHEADIGLAMGIAGTEV 779 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~------g~~V~~~GDG~ND~-~aL~~AdVGIamgi~gt~~ 779 (1039)
.-|..++..++... -+.+..+|||.||. |+++...--+||--.|-+.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 24666666654320 13788999999995 5666666666776555554
No 164
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=88.58 E-value=0.89 Score=47.00 Aligned_cols=92 Identities=10% Similarity=-0.030 Sum_probs=62.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEe---cChh
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR---SSPT 733 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar---~sP~ 733 (1039)
++.+++.++++.|+ .++.++|.-+...+..+.+.+|+...-+.++.+.+.. .+ ..|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~-----------------~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTAN-----------------PDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeeccc-----------------CccCCCCCC
Confidence 36789999999998 4789999999999999999999865323333332211 11 1332
Q ss_pred --hHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 734 --DKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 734 --~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
-=...++.+... .+.++|+||...|..+-++|++-
T Consensus 144 p~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 144 PQAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCE
Confidence 222333334333 45688999999999998888764
No 165
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=88.03 E-value=0.97 Score=46.76 Aligned_cols=92 Identities=14% Similarity=0.100 Sum_probs=60.8
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHH
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYIL 738 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 738 (1039)
-|+ .+.++.+++. ++..++|+.....+..+-+..|+...-+.++...+... .+-.|+-=...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH----------------HKPAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC----------------CCCChHHHHHH
Confidence 454 5889999875 89999999999999999999998653334444333210 11122222223
Q ss_pred HHHHhhcCCCEEEEEcCCccCHHHhhhCCcc
Q 001638 739 VTQLRNVFKEVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 739 V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
.+.+.-. ...+.++||..+|+.+-++|++-
T Consensus 152 ~~~~~~~-~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQ-PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCC-HHHeEEEeccHhhHHHHHHCCCE
Confidence 3333322 24577889999999999999874
No 166
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=87.33 E-value=7.3 Score=46.94 Aligned_cols=98 Identities=13% Similarity=0.024 Sum_probs=62.1
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCCCCceeeCcccccCCHHHHHhhcccceEEEe------c
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE-CGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMAR------S 730 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar------~ 730 (1039)
+++++.+. ++++|.+ +++|+-...-++.+|++ +|++. + -|.+++... +-..-++ |
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----V-IgTeLev~~---------~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADK----V-LGTELEVSK---------SGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----E-EecccEECc---------CCEEeeeecCCCCC
Confidence 56665554 4567754 99999999999999988 89874 1 111111000 0001111 3
Q ss_pred ChhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecC
Q 001638 731 SPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGI 774 (1039)
Q Consensus 731 sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi 774 (1039)
.-++|.+-++......-.. .+-||+.||.|||+.||-+.+++.
T Consensus 173 ~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEEeCC
Confidence 4466887776433210123 456999999999999999999984
No 167
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=86.77 E-value=3 Score=43.34 Aligned_cols=52 Identities=21% Similarity=0.335 Sum_probs=44.0
Q ss_pred EeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH---cCCCC
Q 001638 647 TLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKE---CGILT 698 (1039)
Q Consensus 647 ~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~---~GI~~ 698 (1039)
.+-|.+.++|..-|++.||++.|+.++.+|+.+|.-..+.-+.+.++ ||+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 45699999999999999999999999999999998877776666654 67653
No 168
>PHA02597 30.2 hypothetical protein; Provisional
Probab=86.09 E-value=1.8 Score=45.21 Aligned_cols=93 Identities=12% Similarity=0.062 Sum_probs=55.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+..-.. ..+ ...+.++... .|.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~-----------------~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFP-----------------GAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCC-----------------Ccc-cEEEEeccCc-ccH
Confidence 36899999999999985 566667655444444555666642100 000 0002222222 133
Q ss_pred HHHHHHhhcCC-CEEEEEcCCccCHHHhhhC--Ccc
Q 001638 737 ILVTQLRNVFK-EVVAVTGNGTNDAPALHEA--DIG 769 (1039)
Q Consensus 737 ~~V~~l~~~~g-~~V~~~GDG~ND~~aL~~A--dVG 769 (1039)
.++....++.| +.++++||..+|..+-++| ++-
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 44443333324 4578999999999999999 884
No 169
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=85.69 E-value=1.5 Score=47.05 Aligned_cols=98 Identities=18% Similarity=0.221 Sum_probs=74.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
.++.||+.+.++.|++.|+.+.+.|+-....+..+.+..|+...-..++++.+... ..-.|+-=
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~----------------~KP~Pd~y 148 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR----------------GKPAPDIY 148 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------------CCCCCHHH
Confidence 46799999999999999999999999999999999999999876555555554321 12334444
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCcce
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGL 770 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGI 770 (1039)
+.-.+.|.-. ...+.++.|..|.+.|-++|+.-+
T Consensus 149 L~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 149 LLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEE
Confidence 4445554333 456778899999999999998643
No 170
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=84.91 E-value=1.9 Score=47.70 Aligned_cols=53 Identities=9% Similarity=0.106 Sum_probs=45.4
Q ss_pred CC-ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccc
Q 001638 658 VR-PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFR 710 (1039)
Q Consensus 658 lR-~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~ 710 (1039)
+| |++.+++++|+++|+++.++|+-....+...-+++|+...-+.++.+.+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~ 199 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA 199 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc
Confidence 67 999999999999999999999999999999999999986545566555543
No 171
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=83.71 E-value=11 Score=42.04 Aligned_cols=46 Identities=20% Similarity=0.226 Sum_probs=34.5
Q ss_pred cccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHH---HHHHHcCCCC
Q 001638 653 GIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAK---AIAKECGILT 698 (1039)
Q Consensus 653 ~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~---~iA~~~GI~~ 698 (1039)
.-.+.+=|++.+++++|++.|++++++|+....+.. .--+++|+..
T Consensus 14 ~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 14 WLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred EcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 335667789999999999999999999996543332 3335678754
No 172
>PRK10444 UMP phosphatase; Provisional
Probab=83.45 E-value=2.6 Score=46.07 Aligned_cols=48 Identities=21% Similarity=0.322 Sum_probs=40.8
Q ss_pred eeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc---CCC
Q 001638 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKEC---GIL 697 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~---GI~ 697 (1039)
|++.-.+.+-|++.++++.|+++|++++++|+....+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 455556778899999999999999999999999998888887774 664
No 173
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=83.26 E-value=1.8 Score=46.71 Aligned_cols=90 Identities=18% Similarity=0.175 Sum_probs=58.7
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHH---HHHHHHHHcCCCCCCCceeeCccc-ccCCHHHHHhhcccceEEEecC
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIH---TAKAIAKECGILTDGGLAIEGTDF-RSKNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~GI~~~~~~vi~G~~~-~~~~~~~~~~~~~~~~v~ar~s 731 (1039)
+|.=|++.+.++.+++.|++|..+||++.. .+..=-++.|+.....+++.+..- .. ...
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~-----------------~~~ 176 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK-----------------KSA 176 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS--------------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc-----------------ccc
Confidence 355688999999999999999999998744 333334566765433443333221 00 001
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCHHH
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPA 762 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~a 762 (1039)
.+.|...-+.+++..-++++.+||..+|...
T Consensus 177 ~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 177 VEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ---SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 2347777777777623789999999999865
No 174
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=80.51 E-value=3.7 Score=45.55 Aligned_cols=52 Identities=17% Similarity=0.105 Sum_probs=43.0
Q ss_pred CC-ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCccc
Q 001638 658 VR-PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDF 709 (1039)
Q Consensus 658 lR-~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~ 709 (1039)
+| |++.+++++|+++|+++.++|+.+...+..+.+.+|+...-..++.+.+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i 200 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRK 200 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCc
Confidence 46 89999999999999999999988888889999999997644445544443
No 175
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=79.73 E-value=3.4 Score=41.72 Aligned_cols=88 Identities=22% Similarity=0.329 Sum_probs=61.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCH----HHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecCh-
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNI----HTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSP- 732 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~----~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP- 732 (1039)
+++=+++.|..-++.|=.+..+||+.. .+++.+|+...|...... .|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv-----------------------~f~Gdk~k 171 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPV-----------------------IFAGDKPK 171 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcce-----------------------eeccCCCC
Confidence 455678889999999999999999975 456677888888654433 3443333
Q ss_pred hhHHHHHHHHhhcCCCEEEEEcCCccCHHHhhhCCc-ce
Q 001638 733 TDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADI-GL 770 (1039)
Q Consensus 733 ~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdV-GI 770 (1039)
..+..-...+|++ +-.+-. ||+-||..|-++|++ ||
T Consensus 172 ~~qy~Kt~~i~~~-~~~IhY-GDSD~Di~AAkeaG~RgI 208 (237)
T COG3700 172 PGQYTKTQWIQDK-NIRIHY-GDSDNDITAAKEAGARGI 208 (237)
T ss_pred cccccccHHHHhc-CceEEe-cCCchhhhHHHhcCccce
Confidence 1233445567776 555544 999999999999976 44
No 176
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=78.94 E-value=10 Score=41.64 Aligned_cols=88 Identities=18% Similarity=0.212 Sum_probs=54.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEECCCCHH----HHHHHHHHcCCCCCCCceeeCcc-cccCCHHHHHhhcccceEEEe
Q 001638 655 KDPVRPGVREAVETCLAAGITVRMVTGDNIH----TAKAIAKECGILTDGGLAIEGTD-FRSKNPQEMQELIPKLQVMAR 729 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~----ta~~iA~~~GI~~~~~~vi~G~~-~~~~~~~~~~~~~~~~~v~ar 729 (1039)
+.|.=|++.+..+.+++.|++|.++||+... |.+.+ ++.|+.....+++-+.. -+ ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~-----------------~~ 204 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNS-----------------AE 204 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCc-----------------cc
Confidence 4677889999999999999999999999864 33333 34677543333332211 00 00
Q ss_pred cChhhHHHHHHHHhhcCCCEEEEEcCCccCH
Q 001638 730 SSPTDKYILVTQLRNVFKEVVAVTGNGTNDA 760 (1039)
Q Consensus 730 ~sP~~K~~~V~~l~~~~g~~V~~~GDG~ND~ 760 (1039)
...+.|...-+.+.+..-++++.+||-.+|.
T Consensus 205 ~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 205 NAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred hhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 0112343433444444247899999999997
No 177
>PLN02151 trehalose-phosphatase
Probab=78.79 E-value=22 Score=40.86 Aligned_cols=47 Identities=19% Similarity=0.226 Sum_probs=34.9
Q ss_pred CcEeeeeecccCC--CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Q 001638 645 NYTLIAVVGIKDP--VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAK 692 (1039)
Q Consensus 645 ~l~~lG~v~i~D~--lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~ 692 (1039)
|.|++-++---|. +-++.+++++.|. .+..|.++||+.......+..
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 4555544433333 5688999999999 567999999999999888764
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=78.11 E-value=2.7 Score=46.23 Aligned_cols=41 Identities=27% Similarity=0.317 Sum_probs=33.6
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHHcCCCC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHT---AKAIAKECGILT 698 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~t---a~~iA~~~GI~~ 698 (1039)
+=|++.++|++|+++|++++++||.+..+ .....+++|+..
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 78899999999999999999999977665 444556678754
No 179
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=77.96 E-value=4.4 Score=44.33 Aligned_cols=47 Identities=13% Similarity=0.039 Sum_probs=39.2
Q ss_pred ecccCCCCccHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCCC
Q 001638 652 VGIKDPVRPGVREAVETCLAAGITVRMVTG---DNIHTAKAIAKECGILT 698 (1039)
Q Consensus 652 v~i~D~lR~~v~~aI~~l~~aGi~v~m~TG---D~~~ta~~iA~~~GI~~ 698 (1039)
+.-.+.+=|++.++|++|++.|++++++|| +.........+++|+..
T Consensus 12 l~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 12 MYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred eEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 334456667999999999999999999996 77888888888899865
No 180
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=77.68 E-value=5.1 Score=38.90 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=29.1
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHH
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTA 687 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta 687 (1039)
+++.+++.++++.+++.|+.++++||++....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 77899999999999999999999999987654
No 181
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=77.02 E-value=9.1 Score=41.46 Aligned_cols=134 Identities=16% Similarity=0.197 Sum_probs=70.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCc-ccccCCHHHHHhhcccceEEEe--cCh
Q 001638 656 DPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGT-DFRSKNPQEMQELIPKLQVMAR--SSP 732 (1039)
Q Consensus 656 D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~-~~~~~~~~~~~~~~~~~~v~ar--~sP 732 (1039)
-.+|+++.+.++.|++.+|.+.++|+-=-.....+-++-|...++-.+++-. .|+. + ..+.-|-. ..+
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~---~------g~l~gF~~~lIH~ 159 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDE---D------GVLVGFKGPLIHT 159 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-T---T------SBEEEE-SS---T
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECC---c------ceEeecCCCceEE
Confidence 3479999999999999999999999888888888777778776553333211 1110 0 00000000 011
Q ss_pred hhHHH-------HHHHHhhcCCCEEEEEcCCccCHHHhhhC---CcceeecC-C-C----cHHHHhccCEEeecCCchHH
Q 001638 733 TDKYI-------LVTQLRNVFKEVVAVTGNGTNDAPALHEA---DIGLAMGI-A-G----TEVAKENADVIIMDDNFTTI 796 (1039)
Q Consensus 733 ~~K~~-------~V~~l~~~~g~~V~~~GDG~ND~~aL~~A---dVGIamgi-~-g----t~~ak~~aDivl~dd~f~~i 796 (1039)
-.|-. .-+.++.+ ..|...||..-|+.|-.-. +.-+.+|- + . .+.-+++=||||.+|.=-.+
T Consensus 160 ~NKn~~~l~~~~~~~~~~~R--~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v 237 (246)
T PF05822_consen 160 FNKNESALEDSPYFKQLKKR--TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDV 237 (246)
T ss_dssp T-HHHHHHTTHHHHHCTTT----EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HH
T ss_pred eeCCcccccCchHHHHhccC--CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchH
Confidence 12222 12233433 4577779999999997655 32232331 1 1 12356778999999876566
Q ss_pred HHHH
Q 001638 797 VTVA 800 (1039)
Q Consensus 797 ~~~i 800 (1039)
+..|
T Consensus 238 ~~~i 241 (246)
T PF05822_consen 238 PNAI 241 (246)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 182
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=75.58 E-value=2.1 Score=43.54 Aligned_cols=40 Identities=18% Similarity=0.015 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
..||++.+.++.|.+. +.+.+.|......|..+...++..
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 4699999999999988 999999999999999999998864
No 183
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=74.56 E-value=5.8 Score=42.96 Aligned_cols=91 Identities=12% Similarity=0.120 Sum_probs=54.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh--
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD-- 734 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~-- 734 (1039)
++-||+.++++.|++. +++.++|.-+.. .+..|+...-+.++...+.. +..|.-
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~------------------~~KP~p~~ 168 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHG------------------RSKPFSDM 168 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCC------------------cCCCcHHH
Confidence 3568999999999975 899999986654 15567654222222222211 112221
Q ss_pred HHHHHHHHhhcCCCEEEEEcCC-ccCHHHhhhCCcceee
Q 001638 735 KYILVTQLRNVFKEVVAVTGNG-TNDAPALHEADIGLAM 772 (1039)
Q Consensus 735 K~~~V~~l~~~~g~~V~~~GDG-~ND~~aL~~AdVGIam 772 (1039)
=....+.+.-. .+.++|+||. ..|+.+-++|++-...
T Consensus 169 ~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 169 YHLAAEKLNVP-IGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHcCCC-hhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 11122222222 3568999999 5999999999875443
No 184
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=70.93 E-value=3.4 Score=42.13 Aligned_cols=86 Identities=13% Similarity=0.100 Sum_probs=54.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++.||+.++++ ++.++|.-+......+.+.+|+...-..++++++.. ...-.|+-=.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~----------------~~KP~p~~f~ 146 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVR----------------AYKPDPVVYE 146 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcC----------------CCCCCHHHHH
Confidence 47899999998 377999999998898999999865322233333211 0111222113
Q ss_pred HHHHHHhhcCCCEEEEEcCCccCHHHhhhC
Q 001638 737 ILVTQLRNVFKEVVAVTGNGTNDAPALHEA 766 (1039)
Q Consensus 737 ~~V~~l~~~~g~~V~~~GDG~ND~~aL~~A 766 (1039)
...+.+.-. .+.++|+||+..|..+-+++
T Consensus 147 ~~~~~~~~~-p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 147 LVFDTVGLP-PDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHCCC-HHHeEeEecChhhHHHHhcC
Confidence 334444333 35688999999998776543
No 185
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=67.69 E-value=30 Score=38.12 Aligned_cols=128 Identities=13% Similarity=0.156 Sum_probs=80.9
Q ss_pred cEeeeeecccCCCCccHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHcCC--CCCCCcee---eCcccccCCHH----
Q 001638 646 YTLIAVVGIKDPVRPGVREAVETCLAA-GITVRMVTGDNIHTAKAIAKECGI--LTDGGLAI---EGTDFRSKNPQ---- 715 (1039)
Q Consensus 646 l~~lG~v~i~D~lR~~v~~aI~~l~~a-Gi~v~m~TGD~~~ta~~iA~~~GI--~~~~~~vi---~G~~~~~~~~~---- 715 (1039)
++-+..--...++-++..+.++.|... ..-|+++||+..........--|| ..+++..+ .|.......++
T Consensus 29 l~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~ 108 (266)
T COG1877 29 LTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLR 108 (266)
T ss_pred ccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhh
Confidence 333444456677888999999999988 457999999999998887764333 22222222 33332221110
Q ss_pred -------HHHh------------------------------------------------hcccceEEEecChhhHHHHHH
Q 001638 716 -------EMQE------------------------------------------------LIPKLQVMARSSPTDKYILVT 740 (1039)
Q Consensus 716 -------~~~~------------------------------------------------~~~~~~v~ar~sP~~K~~~V~ 740 (1039)
+++. ...+..|-.|.+-..|...++
T Consensus 109 ~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~ 188 (266)
T COG1877 109 WLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIK 188 (266)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHH
Confidence 0000 011223566666667999998
Q ss_pred HHhhcCC---CEEEEEcCCccCHHHhhhCC----cceeec
Q 001638 741 QLRNVFK---EVVAVTGNGTNDAPALHEAD----IGLAMG 773 (1039)
Q Consensus 741 ~l~~~~g---~~V~~~GDG~ND~~aL~~Ad----VGIamg 773 (1039)
...+..+ ..+.+.||..-|-.|++..+ ++|-+|
T Consensus 189 ~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 189 YIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred HHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 6655423 34888899999999999887 455566
No 186
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=65.42 E-value=17 Score=44.18 Aligned_cols=40 Identities=20% Similarity=0.307 Sum_probs=33.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHHcCCC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNI------------HTAKAIAKECGIL 697 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~------------~ta~~iA~~~GI~ 697 (1039)
+-|++.++++.|+++|++++++|.=.. ..+.++.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997544 3467778888874
No 187
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=64.45 E-value=97 Score=32.77 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 001638 992 WLASVVIGAISMPFGVLLK 1010 (1039)
Q Consensus 992 w~~~i~~~~~~~~~~~~~k 1010 (1039)
+++.+++|++.+++.+.+|
T Consensus 180 ~~~~iiig~i~~~~~~~lk 198 (206)
T PF06570_consen 180 PWVYIIIGVIAFALRFYLK 198 (206)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445677777776665443
No 188
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=63.75 E-value=98 Score=41.07 Aligned_cols=36 Identities=19% Similarity=0.128 Sum_probs=20.1
Q ss_pred CCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc
Q 001638 242 DGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS 278 (1039)
Q Consensus 242 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~ 278 (1039)
-|....+...|.+|.|.+.++..+ +=+|=-.+.|++
T Consensus 161 ~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~LTGES 196 (997)
T TIGR01106 161 VGDLVEVKGGDRIPADLRIISAQG-CKVDNSSLTGES 196 (997)
T ss_pred CCCEEEECCCCEEeeeEEEEEccC-cEEEccccCCCC
Confidence 466666666666666666665432 334444445554
No 189
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=63.48 E-value=77 Score=30.70 Aligned_cols=79 Identities=20% Similarity=0.212 Sum_probs=43.9
Q ss_pred EEEecChhhHHHHHHHHhhcCCCEEEEEcCCcc--CHHHhhhCCcceeecC-CCcHHHHhccCEEeecCCchHHHHHHHH
Q 001638 726 VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTN--DAPALHEADIGLAMGI-AGTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 726 v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~N--D~~aL~~AdVGIamgi-~gt~~ak~~aDivl~dd~f~~i~~~i~~ 802 (1039)
++++..+.=...+++.+.+. +.+...|-|.| |.+++++-+|-++-.. ..++...|.+ +.+--..-+.
T Consensus 42 ii~~~~~~~~~~~l~~~~~L--k~I~~~~~G~d~id~~~a~~~gI~V~n~~g~~~~aVAE~a--------~~T~e~~~~~ 111 (133)
T PF00389_consen 42 IIVGSGTPLTAEVLEAAPNL--KLISTAGAGVDNIDLEAAKERGIPVTNVPGYNAEAVAEHA--------GYTDEARERM 111 (133)
T ss_dssp EEESTTSTBSHHHHHHHTT---SEEEESSSSCTTB-HHHHHHTTSEEEE-TTTTHHHHHHHH--------TGBHHHHHHH
T ss_pred EEEcCCCCcCHHHHhcccee--EEEEEcccccCcccHHHHhhCeEEEEEeCCcCCcchhccc--------hhHHHHHHHH
Confidence 44555442224555666443 67888899998 7888999888887542 1222232333 3333334455
Q ss_pred hHHHHHHHHHHH
Q 001638 803 GRSVYINIQKFV 814 (1039)
Q Consensus 803 gR~~~~nI~k~i 814 (1039)
++.+.+|+..++
T Consensus 112 ~~~~~~ni~~~l 123 (133)
T PF00389_consen 112 AEIAAENIERFL 123 (133)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566666666554
No 190
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=63.20 E-value=14 Score=38.26 Aligned_cols=96 Identities=24% Similarity=0.295 Sum_probs=56.0
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHH---HHHhh---cccceEEEecC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQ---EMQEL---IPKLQVMARSS 731 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~---~~~~~---~~~~~v~ar~s 731 (1039)
+.|++.+++..++++|++++|+|- +-||-.. ..++.+|....+. .+.+. +.. ..+|.-.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg---yf~~~~f~~~~~~m~~~l~~~gv~id~-i~~Cph~ 96 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG---YFTEADFDKLHNKMLKILASQGVKIDG-ILYCPHH 96 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc---CccHHHHHHHHHHHHHHHHHcCCccce-EEECCCC
Confidence 478999999999999999999995 2333221 1122222222111 11110 111 1333333
Q ss_pred hhh--------HHHHHHHHhhcCC---CEEEEEcCCccCHHHhhhCCcc
Q 001638 732 PTD--------KYILVTQLRNVFK---EVVAVTGNGTNDAPALHEADIG 769 (1039)
Q Consensus 732 P~~--------K~~~V~~l~~~~g---~~V~~~GDG~ND~~aL~~AdVG 769 (1039)
|++ ...+.+.+++. + ....+|||-..|..+-..|+++
T Consensus 97 p~~~c~cRKP~~gm~~~~~~~~-~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 97 PEDNCDCRKPKPGMLLSALKEY-NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCcccCCChHHHHHHHHHh-CCCccceEEecCcHHHHHHHHHCCCC
Confidence 332 33444555554 4 5788999999999988888776
No 191
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=63.05 E-value=20 Score=38.70 Aligned_cols=64 Identities=20% Similarity=0.254 Sum_probs=32.2
Q ss_pred EEEecChhhHHHHHHHHhhcCC------CEEEEEcCCccCHHHhhhC------CcceeecCCCc-HHHHhccCEEeec
Q 001638 726 VMARSSPTDKYILVTQLRNVFK------EVVAVTGNGTNDAPALHEA------DIGLAMGIAGT-EVAKENADVIIMD 790 (1039)
Q Consensus 726 v~ar~sP~~K~~~V~~l~~~~g------~~V~~~GDG~ND~~aL~~A------dVGIamgi~gt-~~ak~~aDivl~d 790 (1039)
|-.|..-..|...|+.+.+..+ ..++++||...|-.|++.. +++|.+| .+. ..-..+|++-|.|
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 4445555569999998876644 3689999999999998763 5677777 433 2234556666654
No 192
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=60.65 E-value=31 Score=39.56 Aligned_cols=102 Identities=15% Similarity=0.079 Sum_probs=63.3
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-C-------CCCCCCceeeCcc----------cccCCHHH----
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKEC-G-------ILTDGGLAIEGTD----------FRSKNPQE---- 716 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~-G-------I~~~~~~vi~G~~----------~~~~~~~~---- 716 (1039)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ | +..--+.++.+.. |+....+.
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 579999999999999999999999999999999996 6 4433334444332 22111100
Q ss_pred HHhh--cccceEEEecChhhHHHHHHHHhhcCCCEEEEEcCCc-cCHHHhh
Q 001638 717 MQEL--IPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGT-NDAPALH 764 (1039)
Q Consensus 717 ~~~~--~~~~~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GDG~-ND~~aL~ 764 (1039)
.... +.+-.|++.=+-. .+.+.+.-. ++.|+++||.. .|.-.-+
T Consensus 266 ~~~~~~l~~g~vY~gGn~~---~~~~~l~~~-~~~vlYvGD~i~~Di~~~k 312 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSLK---QFHELLKWR-GKEVLYFGDHIYGDLLRSK 312 (343)
T ss_pred CCccccccCCCeEeCCCHH---HHHHHHCCC-CCcEEEECCcchHHHHhhH
Confidence 0000 1222355443332 333444445 78899999974 4766554
No 193
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=59.48 E-value=3.3e+02 Score=36.47 Aligned_cols=77 Identities=18% Similarity=0.218 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEe---e
Q 001638 201 LGIVLSILLVVIVTAVSDYKQSLQ-FKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILIS---G 276 (1039)
Q Consensus 201 ~~i~~~lllv~~v~a~~~~~~~~~-~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~---g 276 (1039)
+...+.++++++++....++++++ .+++. +... ......| ++-|....+...|.+|-|.++++ |
T Consensus 193 ~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~----~~~~----~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g 260 (1054)
T TIGR01657 193 YYYSLCIVFMSSTSISLSVYQIRKQMQRLR----DMVH----KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEE 260 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----Hhhc----CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCC
Confidence 344455555566666666555554 33222 2111 1222222 34588999999999999999997 5
Q ss_pred CceeEeccCCCCC
Q 001638 277 YSLTIDESSLSGE 289 (1039)
Q Consensus 277 ~~l~VDES~LTGE 289 (1039)
..+-+|=-.+.|+
T Consensus 261 ~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 261 KTMPCDSVLLSGS 273 (1054)
T ss_pred CEecceEEEEeCc
Confidence 5555666566663
No 194
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=59.45 E-value=30 Score=36.68 Aligned_cols=122 Identities=16% Similarity=0.174 Sum_probs=71.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHH
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKY 736 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 736 (1039)
++-|++.++++.+++. +++.++|--....+....+++|+...-+.++.-.+ .....|.. .
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~------------------~g~~KP~~-~ 158 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISED------------------VGVAKPDP-E 158 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecc------------------cccCCCCc-H
Confidence 4678899999999999 99999999888888999999997653332222211 11223322 2
Q ss_pred HHHHHHhhcC--CCEEEEEcCC-ccCHHHhhhCCc-ceeecCCCcH--HHHhccCEEeecCCchHHHHHH
Q 001638 737 ILVTQLRNVF--KEVVAVTGNG-TNDAPALHEADI-GLAMGIAGTE--VAKENADVIIMDDNFTTIVTVA 800 (1039)
Q Consensus 737 ~~V~~l~~~~--g~~V~~~GDG-~ND~~aL~~AdV-GIamgi~gt~--~ak~~aDivl~dd~f~~i~~~i 800 (1039)
-.-..+++.. .+.++++||. .||...-++++. ++-+...+.. ......|..+.+ +..+..++
T Consensus 159 ~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~--l~~l~~~~ 226 (229)
T COG1011 159 IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISS--LAELLDLL 226 (229)
T ss_pred HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcC--HHHHHHHH
Confidence 2333333330 3579999996 567455555654 2223312211 111456666653 55555544
No 195
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=57.91 E-value=1.7e+02 Score=37.51 Aligned_cols=199 Identities=15% Similarity=0.150 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeC-ceeE
Q 001638 203 IVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGY-SLTI 281 (1039)
Q Consensus 203 i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~-~l~V 281 (1039)
-.+.+++++++++..+|.++++.++..+...+.... ...+ ++-|....+...|.+|-|.++++.. .+-+
T Consensus 57 ~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~------~~~V----~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 126 (755)
T TIGR01647 57 DFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAP------KARV----LRDGKWQEIPASELVPGDVVRLKIGDIVPA 126 (755)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCC------eEEE----EECCEEEEEEhhhCcCCCEEEECCCCEEec
Confidence 345566677788888999988877776666543221 1122 2347888999999999999999744 3445
Q ss_pred eccCCCCCCCccccC----CCCce-eecccEEeeCCeEEEEEEeccchhhHH--HHHHhccCCCCCCchHHHHhHHHHHH
Q 001638 282 DESSLSGETEPVHIN----RDRPF-LLSGTKVQDGSGKMLVTSVGMRTEWGR--LMVTLSEGGEDETPLQVKLNGVATVI 354 (1039)
Q Consensus 282 DES~LTGEs~pv~k~----~~~~~-l~sGt~v~~G~~~~~V~~vG~~T~~gk--i~~~~~~~~~~~tplq~~l~~~a~~i 354 (1039)
|=-.+.|+..-+.-+ +..|+ -..|..+..|+...-=...+.-+..|. ....+.+.-.+..+-...+++....+
T Consensus 127 Dg~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i 206 (755)
T TIGR01647 127 DCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKI 206 (755)
T ss_pred eEEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHH
Confidence 555555553322211 22332 245777777775543333343333332 11222221112111222355555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHh
Q 001638 355 GKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKL 428 (1039)
Q Consensus 355 ~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~~~m 428 (1039)
..+...++ +++..+.+.. | .......+..++...+...-.+.|.+++++...++..-
T Consensus 207 ~~~~~~~~---~~~~~i~~~~----------~----~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g 263 (755)
T TIGR01647 207 GLFLIVLI---GVLVLIELVV----------L----FFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVG 263 (755)
T ss_pred HHHHHHHH---HHHHHHHHHH----------H----HHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHH
Confidence 54433222 2221111111 0 00011223445666666677788888888888877643
No 196
>PTZ00445 p36-lilke protein; Provisional
Probab=56.89 E-value=23 Score=37.49 Aligned_cols=64 Identities=16% Similarity=0.234 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeee--eecccCC----------CCccHHHHHHHHHHCCCE
Q 001638 608 KNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIA--VVGIKDP----------VRPGVREAVETCLAAGIT 675 (1039)
Q Consensus 608 ~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG--~v~i~D~----------lR~~v~~aI~~l~~aGi~ 675 (1039)
+......+.+.+.|.|++++- -|.|+++ .=|--+| ++|+.+.-+++|+++||+
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D---------------~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~ 93 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASD---------------FDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIK 93 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEec---------------chhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCe
Confidence 445667777889999998864 2344444 1112333 799999999999999999
Q ss_pred EEEECCCCHHH
Q 001638 676 VRMVTGDNIHT 686 (1039)
Q Consensus 676 v~m~TGD~~~t 686 (1039)
|.++|=-...+
T Consensus 94 v~VVTfSd~~~ 104 (219)
T PTZ00445 94 ISVVTFSDKEL 104 (219)
T ss_pred EEEEEccchhh
Confidence 99999765554
No 197
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.15 E-value=43 Score=37.58 Aligned_cols=137 Identities=19% Similarity=0.215 Sum_probs=76.6
Q ss_pred ccCCCCccHHHHHHHHHHCCCE---EEEECCCCHHHH------HHHHHHcCCCCCC------------------------
Q 001638 654 IKDPVRPGVREAVETCLAAGIT---VRMVTGDNIHTA------KAIAKECGILTDG------------------------ 700 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~aGi~---v~m~TGD~~~ta------~~iA~~~GI~~~~------------------------ 700 (1039)
+.++++.+.++.++.+++.|++ ..+.-||++... ..-|+++||....
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 4466788888999999888876 355667776554 3367778886410
Q ss_pred --CceeeCcccccCCHHHHHhh------------------cccceEEEecChhhHHHHHHHHhh-cCCCEEEEEcCC-cc
Q 001638 701 --GLAIEGTDFRSKNPQEMQEL------------------IPKLQVMARSSPTDKYILVTQLRN-VFKEVVAVTGNG-TN 758 (1039)
Q Consensus 701 --~~vi~G~~~~~~~~~~~~~~------------------~~~~~v~ar~sP~~K~~~V~~l~~-~~g~~V~~~GDG-~N 758 (1039)
++.+.-+--..+++.++.+. ...-.-|.-|||.-=.++++...- ..|..|+++|-| .-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 11111111112222222221 111123556777766666666532 137899999997 55
Q ss_pred CHH---HhhhCCcceeecCCCc---HHHHhccCEEeec
Q 001638 759 DAP---ALHEADIGLAMGIAGT---EVAKENADVIIMD 790 (1039)
Q Consensus 759 D~~---aL~~AdVGIamgi~gt---~~ak~~aDivl~d 790 (1039)
-.| +|.+++.-+.+=-+.+ ..+-..||+++.-
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 555 4666666554431222 2234568999874
No 198
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=51.02 E-value=2.7e+02 Score=36.64 Aligned_cols=80 Identities=20% Similarity=0.135 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc-
Q 001638 200 GLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS- 278 (1039)
Q Consensus 200 ~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~- 278 (1039)
.+.-.+.++++++++++..+.++++.++..+...+... ...+| ++-|....+..-|.+|-|.++++...
T Consensus 35 ~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~------~~~~V----iRdg~~~~I~~~~Lv~GDiv~l~~Gd~ 104 (917)
T TIGR01116 35 AFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYES------EHAKV----LRDGRWSVIKAKDLVPGDIVELAVGDK 104 (917)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC------CceEE----EECCEEEEEEHHHCCCCCEEEECCCCE
Confidence 34455667777888888888888877766655554211 12222 23488899999999999999998543
Q ss_pred eeEeccCCCCC
Q 001638 279 LTIDESSLSGE 289 (1039)
Q Consensus 279 l~VDES~LTGE 289 (1039)
+-.|=-.+.|+
T Consensus 105 IPaD~~ll~~~ 115 (917)
T TIGR01116 105 VPADIRVLSLK 115 (917)
T ss_pred eeccEEEEEec
Confidence 33344444443
No 199
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.73 E-value=57 Score=36.61 Aligned_cols=65 Identities=14% Similarity=0.235 Sum_probs=37.9
Q ss_pred EEEecChhhHHHHHHHHhh-cCCCEEEEEc-CCccCHH---HhhhCCcceeecCCC---cHHHHhccCEEeec
Q 001638 726 VMARSSPTDKYILVTQLRN-VFKEVVAVTG-NGTNDAP---ALHEADIGLAMGIAG---TEVAKENADVIIMD 790 (1039)
Q Consensus 726 v~ar~sP~~K~~~V~~l~~-~~g~~V~~~G-DG~ND~~---aL~~AdVGIamgi~g---t~~ak~~aDivl~d 790 (1039)
.|.-|||.-=.++++...- ..|..|+++| -+.-=.| +|.+++..+.+--+- .+.+-..||+++.-
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 3556777666666655431 1278999999 4554555 466666665543111 22344568998863
No 200
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.01 E-value=82 Score=35.12 Aligned_cols=64 Identities=14% Similarity=0.220 Sum_probs=38.6
Q ss_pred EEecChhhHHHHHHHHhhc-CCCEEEEEcC-CccCHH---HhhhCCcceeecCCCcH---HHHhccCEEeec
Q 001638 727 MARSSPTDKYILVTQLRNV-FKEVVAVTGN-GTNDAP---ALHEADIGLAMGIAGTE---VAKENADVIIMD 790 (1039)
Q Consensus 727 ~ar~sP~~K~~~V~~l~~~-~g~~V~~~GD-G~ND~~---aL~~AdVGIamgi~gt~---~ak~~aDivl~d 790 (1039)
|.-|||.-=.++++...-. .|..|+++|- |.--.| +|.+++.-+.+=.+-++ ..-..||+++.-
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 5667777666666654321 2789999999 666666 45555554444212222 234669999863
No 201
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=45.82 E-value=2.1e+02 Score=37.73 Aligned_cols=175 Identities=16% Similarity=0.061 Sum_probs=81.3
Q ss_pred eCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEe
Q 001638 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSV 320 (1039)
Q Consensus 241 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~v 320 (1039)
.-|....+...|.+|.|.+.++ |+..=+|=-.+.|++.-++-. .|+...+.. +..+.+|+-..-=..++.=+..
T Consensus 185 v~GDiV~l~~Gd~IPaD~~li~-g~~l~VdES~LTGES~pv~K~--~~~~n~v~~---GT~v~~G~~~~iV~~tG~~T~~ 258 (941)
T TIGR01517 185 VVGDIVSLSTGDVVPADGVFIS-GLSLEIDESSITGESDPIKKG--APKDSFLLS---GTVVNEGSGRMLVTAVGVNSFG 258 (941)
T ss_pred CCCCEEEECCCCEecccEEEEE-cCcEEEEecccCCCCCccccc--CCCCceEEe---CCeEEeeEEEEEEEEeCCCcHH
Confidence 4688999999999999999995 444556666667766433322 233322222 2345666533221111222222
Q ss_pred ccchhhHHHHHHhccCCCCCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchhhhHHHHHHHHH
Q 001638 321 GMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAI 400 (1039)
Q Consensus 321 G~~T~~gki~~~~~~~~~~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 400 (1039)
|.=. +.+....+...-+..+.+..+.+......+++++.++.++.+......+....... +.......+..++..
T Consensus 259 gki~---~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~al~l 333 (941)
T TIGR01517 259 GKLM---MELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEE--DAQTFLDHFIIAVTI 333 (941)
T ss_pred HHHH---HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccch--hhHHHHHHHHHHHHH
Confidence 2111 11111111122222233333344433333333333222222222111100000000 000012345566777
Q ss_pred HHHHHHhhhcCchhHHHHHHHHHHHH
Q 001638 401 AVTIVVVAVPEGLPLAVTLSLAFAMK 426 (1039)
Q Consensus 401 ai~ilvvavP~~Lplavtl~la~~~~ 426 (1039)
.++.+..++|...++++..+.....+
T Consensus 334 lv~~iP~~Lp~~vti~l~~~~~~mak 359 (941)
T TIGR01517 334 VVVAVPEGLPLAVTIALAYSMKKMMK 359 (941)
T ss_pred HHhhCCCchHHHHHHHHHHHHHHHHh
Confidence 77888888999999999888765554
No 202
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=44.17 E-value=1.2e+02 Score=33.09 Aligned_cols=122 Identities=11% Similarity=0.082 Sum_probs=65.0
Q ss_pred ccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhc-ccceEEEecChhhHHHH
Q 001638 660 PGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELI-PKLQVMARSSPTDKYIL 738 (1039)
Q Consensus 660 ~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~-~~~~v~ar~sP~~K~~~ 738 (1039)
++..++++.|++.|++..+.|+.............|+.. -+. .+.... .+..++..-+|+-=...
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------~~~-----~i~~~~~~~~~~~gKP~p~~~~~~ 188 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------FVT-----ALEYATDTKATVVGKPSKTFFLEA 188 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------HHH-----HHHHHhCCCceeecCCCHHHHHHH
Confidence 678899999999999999998865543322221122110 000 000000 01113333344322333
Q ss_pred HHHHhhcCCCEEEEEcCCc-cCHHHhhhCCcc-eeecCCCc---H---HHHhccCEEeecCCchHHHHH
Q 001638 739 VTQLRNVFKEVVAVTGNGT-NDAPALHEADIG-LAMGIAGT---E---VAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 739 V~~l~~~~g~~V~~~GDG~-ND~~aL~~AdVG-Iamgi~gt---~---~ak~~aDivl~dd~f~~i~~~ 799 (1039)
.+.+.-. .+.++|+||.. +|..+-+.+++- +.+. .|. + .....+|+++. ++..+...
T Consensus 189 ~~~~~~~-~~~~~~vGD~~~~Di~~a~~~G~~~i~v~-~G~~~~~~~~~~~~~pd~~~~--sl~el~~~ 253 (257)
T TIGR01458 189 LRATGCE-PEEAVMIGDDCRDDVGGAQDCGMRGIQVR-TGKYRPSDEEKINVPPDLTCD--SLPHAVDL 253 (257)
T ss_pred HHHhCCC-hhhEEEECCCcHHHHHHHHHcCCeEEEEC-CCCCChHHhcccCCCCCEEEC--CHHHHHHH
Confidence 3444333 46789999996 899999988863 3333 332 1 12234677774 46666543
No 203
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=43.61 E-value=24 Score=39.00 Aligned_cols=94 Identities=20% Similarity=0.188 Sum_probs=62.6
Q ss_pred eeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc----CCCCCCCceeeCcccccCCHHHHHhhcccce
Q 001638 650 AVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKEC----GILTDGGLAIEGTDFRSKNPQEMQELIPKLQ 725 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~----GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 725 (1039)
|++.--..+=||+.++|+.|+++|++++.+|.....+....++++ |+....+.
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~----------------------- 73 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDD----------------------- 73 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHH-----------------------
Confidence 677778889999999999999999999999998877777555443 33222111
Q ss_pred EEEecChhhHHHHHHHHhhc-CCCEEEEEcCCccCHHHhhhCCcceee
Q 001638 726 VMARSSPTDKYILVTQLRNV-FKEVVAVTGNGTNDAPALHEADIGLAM 772 (1039)
Q Consensus 726 v~ar~sP~~K~~~V~~l~~~-~g~~V~~~GDG~ND~~aL~~AdVGIam 772 (1039)
++. +. ......++++ .+..|.++|. ..+...|+.+++-+.-
T Consensus 74 i~T---S~--~at~~~l~~~~~~~kv~viG~-~~l~~~l~~~G~~~~~ 115 (269)
T COG0647 74 IVT---SG--DATADYLAKQKPGKKVYVIGE-EGLKEELEGAGFELVD 115 (269)
T ss_pred eec---HH--HHHHHHHHhhCCCCEEEEECC-cchHHHHHhCCcEEec
Confidence 211 11 1122334443 1368999995 4667788888877644
No 204
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=43.59 E-value=8.7e+02 Score=32.01 Aligned_cols=60 Identities=25% Similarity=0.339 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEe
Q 001638 206 SILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILIS 275 (1039)
Q Consensus 206 ~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~ 275 (1039)
.++.+++++++..+.|+.+..+..+..++.. ...+.=++-|..+.+...|.||-|.+.++
T Consensus 108 ~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~----------~~~~~V~R~g~~~~i~a~eLVpGDiV~l~ 167 (917)
T COG0474 108 VILLVVVINALLGFVQEYRAEKALEALKKMS----------SPKAKVLRDGKFVEIPASELVPGDIVLLE 167 (917)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------cCceEEEeCCcEEEecHHHCCCCcEEEEC
Confidence 4444555555555555555555444443322 11111222555555566666666665555
No 205
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=38.51 E-value=37 Score=32.37 Aligned_cols=40 Identities=28% Similarity=0.331 Sum_probs=30.9
Q ss_pred CCccHHHHHHHHHHCCCE-EEEECCCCHHHHHHHHHHcCCC
Q 001638 658 VRPGVREAVETCLAAGIT-VRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~-v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
+.+.+.+.+++|.+.|++ +|+.+|...+.+...|++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 355789999999999997 9999999999999999999884
No 206
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=37.55 E-value=50 Score=33.31 Aligned_cols=41 Identities=22% Similarity=0.104 Sum_probs=37.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT 698 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~ 698 (1039)
.+||++.+.++.|++. +++.++|.-....|..+.+.++...
T Consensus 58 ~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 58 KLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 4799999999999955 9999999999999999999998753
No 207
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.30 E-value=1.1e+02 Score=34.28 Aligned_cols=135 Identities=14% Similarity=0.198 Sum_probs=73.4
Q ss_pred cCCCCccHHHHHHHHHHC-CCE---EEEECCCCHHHH------HHHHHHcCCCCCC------------------------
Q 001638 655 KDPVRPGVREAVETCLAA-GIT---VRMVTGDNIHTA------KAIAKECGILTDG------------------------ 700 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~a-Gi~---v~m~TGD~~~ta------~~iA~~~GI~~~~------------------------ 700 (1039)
.++++.+.++-++.+++. |++ +.+..||++... ...|+++||....
T Consensus 10 A~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (295)
T PRK14174 10 SLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPD 89 (295)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 455678888888888776 665 466678776554 3467778886410
Q ss_pred --CceeeCcccccCCHHHHHh------------------hcccc--eEEEecChhhHHHHHHHHhh-cCCCEEEEEcCCc
Q 001638 701 --GLAIEGTDFRSKNPQEMQE------------------LIPKL--QVMARSSPTDKYILVTQLRN-VFKEVVAVTGNGT 757 (1039)
Q Consensus 701 --~~vi~G~~~~~~~~~~~~~------------------~~~~~--~v~ar~sP~~K~~~V~~l~~-~~g~~V~~~GDG~ 757 (1039)
++.+.-+-...+++..+.+ +...- .-|.-|||.-=.++++...- ..|..|+++|.+.
T Consensus 90 V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~ 169 (295)
T PRK14174 90 VHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN 169 (295)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 1111111111222222222 21111 23455788766666665532 1378999999985
Q ss_pred cC-HH---Hhh------hCCcceeecCCCcH--HHHhccCEEeec
Q 001638 758 ND-AP---ALH------EADIGLAMGIAGTE--VAKENADVIIMD 790 (1039)
Q Consensus 758 ND-~~---aL~------~AdVGIamgi~gt~--~ak~~aDivl~d 790 (1039)
.= -| ||. .|.|-++.- ...+ ..-..||+++.-
T Consensus 170 iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 170 IVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAA 213 (295)
T ss_pred cchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 52 22 443 355666543 2222 245679999874
No 208
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.15 E-value=1.1e+02 Score=34.05 Aligned_cols=135 Identities=16% Similarity=0.223 Sum_probs=72.7
Q ss_pred cCCCCccHHHHHHHHHHC-CCE---EEEECCCCHHHH------HHHHHHcCCCCCC------------------------
Q 001638 655 KDPVRPGVREAVETCLAA-GIT---VRMVTGDNIHTA------KAIAKECGILTDG------------------------ 700 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~a-Gi~---v~m~TGD~~~ta------~~iA~~~GI~~~~------------------------ 700 (1039)
...+|.+.++.++.+++. |++ ..++.||++... ..-|+++||....
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 89 (286)
T PRK14184 10 AATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPD 89 (286)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCc
Confidence 345677888888888776 765 355578776643 4467778886410
Q ss_pred --CceeeCcccccCCHHHHHh------------------hcccceEEEecChhhHHHHHHHHhhc-CCCEEEEEcCCccC
Q 001638 701 --GLAIEGTDFRSKNPQEMQE------------------LIPKLQVMARSSPTDKYILVTQLRNV-FKEVVAVTGNGTND 759 (1039)
Q Consensus 701 --~~vi~G~~~~~~~~~~~~~------------------~~~~~~v~ar~sP~~K~~~V~~l~~~-~g~~V~~~GDG~ND 759 (1039)
++.+.-+--..+++.++.+ +...-.-|.-|||.-=.++++..+-. .|..|.++|.+..=
T Consensus 90 V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iV 169 (286)
T PRK14184 90 IDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIV 169 (286)
T ss_pred CceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 1111111111222222222 22111235567887666666665421 27889999988541
Q ss_pred ----HHHhhh------CCcceeecCCCcH--HHHhccCEEeec
Q 001638 760 ----APALHE------ADIGLAMGIAGTE--VAKENADVIIMD 790 (1039)
Q Consensus 760 ----~~aL~~------AdVGIamgi~gt~--~ak~~aDivl~d 790 (1039)
+-+|.. |.|-++.. ...+ ..-..||+++.-
T Consensus 170 G~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 170 GKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFVA 211 (286)
T ss_pred hHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 224543 55655543 2222 244678988864
No 209
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.14 E-value=1.1e+02 Score=34.03 Aligned_cols=45 Identities=18% Similarity=0.333 Sum_probs=33.4
Q ss_pred ccCCCCccHHHHHHHHHHCCCE---EEEECCCCHHHH------HHHHHHcCCCC
Q 001638 654 IKDPVRPGVREAVETCLAAGIT---VRMVTGDNIHTA------KAIAKECGILT 698 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~aGi~---v~m~TGD~~~ta------~~iA~~~GI~~ 698 (1039)
+...++.+.++.++.+++.|++ +.+..||++... ...|+++||..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788889999999888876 566778887655 34678889865
No 210
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.09 E-value=1.3e+02 Score=33.54 Aligned_cols=136 Identities=13% Similarity=0.180 Sum_probs=73.9
Q ss_pred cCCCCccHHHHHHHHHHCCCE---EEEECCCCHHHH------HHHHHHcCCCCCC-------------------------
Q 001638 655 KDPVRPGVREAVETCLAAGIT---VRMVTGDNIHTA------KAIAKECGILTDG------------------------- 700 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~---v~m~TGD~~~ta------~~iA~~~GI~~~~------------------------- 700 (1039)
..+++.+.++.++.+++.|++ ..+.-||++... ..-|+++||....
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 89 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 345778888999999887876 456678776654 3467888886510
Q ss_pred -CceeeCcccccCCHHHHHhhc------------------ccceEEEecChhhHHHHHHHHhh-cCCCEEEEEcCCccC-
Q 001638 701 -GLAIEGTDFRSKNPQEMQELI------------------PKLQVMARSSPTDKYILVTQLRN-VFKEVVAVTGNGTND- 759 (1039)
Q Consensus 701 -~~vi~G~~~~~~~~~~~~~~~------------------~~~~v~ar~sP~~K~~~V~~l~~-~~g~~V~~~GDG~ND- 759 (1039)
++.+.-+-...+++.++.+.+ ..-.-|.-|||.-=.++++...- ..|..|.++|.+..=
T Consensus 90 ~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVG 169 (282)
T PRK14169 90 DAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVG 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccch
Confidence 111111111122222222222 11123456777766666666542 127889999988541
Q ss_pred ---HHHhhhCCcceeecCCCcH---HHHhccCEEeec
Q 001638 760 ---APALHEADIGLAMGIAGTE---VAKENADVIIMD 790 (1039)
Q Consensus 760 ---~~aL~~AdVGIamgi~gt~---~ak~~aDivl~d 790 (1039)
+.+|...+.-+.+--+-|. ..-..||+++.-
T Consensus 170 kPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 170 RPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 2245444444433322332 234568888764
No 211
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=36.86 E-value=1.6e+02 Score=31.87 Aligned_cols=82 Identities=13% Similarity=0.115 Sum_probs=53.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHH----HHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEE--ecC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHT----AKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMA--RSS 731 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~t----a~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~a--r~s 731 (1039)
+=||+.|.++...+.|.+|..+|-+..+. +..=-++.|+.... ...-++- ..+
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~---------------------~~~~llkk~~k~ 181 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL---------------------ESHLLLKKDKKS 181 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc---------------------ccceEEeeCCCc
Confidence 46899999999999999999999987766 33344556775411 0001111 223
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCHHHhh
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPALH 764 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~aL~ 764 (1039)
.+...+.|+. - -.+|+.+||..+|-....
T Consensus 182 Ke~R~~~v~k---~-~~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 182 KEVRRQAVEK---D-YKIVMLVGDNLDDFGDNA 210 (274)
T ss_pred HHHHHHHHhh---c-cceeeEecCchhhhcchh
Confidence 3444444443 3 478999999999875443
No 212
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=36.44 E-value=1.1e+02 Score=34.66 Aligned_cols=49 Identities=16% Similarity=0.107 Sum_probs=39.2
Q ss_pred eeecccCCCCccHHHHHHHHHHC----CCEEEEECCCC---HH-HHHHHHHHcCCCC
Q 001638 650 AVVGIKDPVRPGVREAVETCLAA----GITVRMVTGDN---IH-TAKAIAKECGILT 698 (1039)
Q Consensus 650 G~v~i~D~lR~~v~~aI~~l~~a----Gi~v~m~TGD~---~~-ta~~iA~~~GI~~ 698 (1039)
|++.-.+++-|++.++++.|++. |+++..+|-.. .. .+..+.+++|+.-
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 56666788899999999999999 99999999654 33 3566678888854
No 213
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=36.02 E-value=1.8e+02 Score=30.95 Aligned_cols=63 Identities=21% Similarity=0.276 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCc
Q 001638 207 ILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS 278 (1039)
Q Consensus 207 lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~ 278 (1039)
++++++++.+.++.++++.++..+..++.... +...+ +.-|....+...|.+|-|.+.+....
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g~ 64 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----KKVTV----IRDGRWQKIPSSELVPGDIIILKAGD 64 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----EEEEE----EETTEEEEEEGGGT-TTSEEEEETTE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----ccEEE----EeccccccchHhhccceeeeeccccc
Confidence 56667777777877777777666555442221 11222 33379999999999999999997543
No 214
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=35.87 E-value=73 Score=34.40 Aligned_cols=48 Identities=21% Similarity=0.198 Sum_probs=34.5
Q ss_pred eecccCCCCccHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHH-cCCCC
Q 001638 651 VVGIKDPVRPGVREAVETCLAAGITVRMVT---GDNIHTAKAIAKE-CGILT 698 (1039)
Q Consensus 651 ~v~i~D~lR~~v~~aI~~l~~aGi~v~m~T---GD~~~ta~~iA~~-~GI~~ 698 (1039)
++.-.+.+=|++.++++.++++|++++++| |.........-.+ .|+..
T Consensus 8 vL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~ 59 (236)
T TIGR01460 8 VLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDV 59 (236)
T ss_pred ccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 333345667799999999999999999998 6665555443344 67743
No 215
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.58 E-value=1.4e+02 Score=33.24 Aligned_cols=44 Identities=25% Similarity=0.339 Sum_probs=31.6
Q ss_pred cCCCCccHHHHHHHHHHCCCE---EEEECCCCHHHH------HHHHHHcCCCC
Q 001638 655 KDPVRPGVREAVETCLAAGIT---VRMVTGDNIHTA------KAIAKECGILT 698 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~---v~m~TGD~~~ta------~~iA~~~GI~~ 698 (1039)
.++++.+.++.++.+++.|++ ..+.-||++... ...|+++||..
T Consensus 10 A~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14182 10 AAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 355678888888888888876 456668776654 44677888864
No 216
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=34.11 E-value=2.2e+02 Score=35.38 Aligned_cols=144 Identities=15% Similarity=0.198 Sum_probs=92.1
Q ss_pred EEEEEEecCCCCCcC------CCCCCCcEeee----eecccCCCCccHHHHHHHHHHCCCEE-EEECC----CCHHHHHH
Q 001638 625 LCLAFQDIKGNHKAE------SIPENNYTLIA----VVGIKDPVRPGVREAVETCLAAGITV-RMVTG----DNIHTAKA 689 (1039)
Q Consensus 625 l~~A~k~l~~~~~~~------~~~e~~l~~lG----~v~i~D~lR~~v~~aI~~l~~aGi~v-~m~TG----D~~~ta~~ 689 (1039)
+-.+||.+.+++.+. ..+...+..+- ++|...-++.=+...++...+.|+.+ ++++. ||...+..
T Consensus 51 fd~~~rfl~edpwerl~~~r~~~pnt~lqmL~Rg~N~vGy~~~~d~vv~~~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~ 130 (596)
T PRK14042 51 FDACLRFLKEDPWSRLRQLRQALPNTQLSMLLRGQNLLGYRNYADDVVRAFVKLAVNNGVDVFRVFDALNDARNLKVAID 130 (596)
T ss_pred cceeecccCCCHHHHHHHHHHhCCCCceEEEeccccccccccCChHHHHHHHHHHHHcCCCEEEEcccCcchHHHHHHHH
Confidence 444677766654221 23445666666 88888888888999999999999984 55554 45777888
Q ss_pred HHHHcCCCCCCCceeeCcccccCCHHHHHhhcc-------cc----eEEEecChhhHHHHHHHHhhcCCCEEEEEcC---
Q 001638 690 IAKECGILTDGGLAIEGTDFRSKNPQEMQELIP-------KL----QVMARSSPTDKYILVTQLRNVFKEVVAVTGN--- 755 (1039)
Q Consensus 690 iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~-------~~----~v~ar~sP~~K~~~V~~l~~~~g~~V~~~GD--- 755 (1039)
.++++|......++.++.. ..+.+.+.++.. +. .-..-++|.+=.++|+.+++..+-.+.+=+.
T Consensus 131 ~~k~~G~~~~~~i~yt~sp--~~t~e~~~~~ak~l~~~Gad~I~IkDtaG~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~ 208 (596)
T PRK14042 131 AIKSHKKHAQGAICYTTSP--VHTLDNFLELGKKLAEMGCDSIAIKDMAGLLTPTVTVELYAGLKQATGLPVHLHSHSTS 208 (596)
T ss_pred HHHHcCCEEEEEEEecCCC--CCCHHHHHHHHHHHHHcCCCEEEeCCcccCCCHHHHHHHHHHHHhhcCCEEEEEeCCCC
Confidence 8999999887777787755 233333333221 11 1234578999999999999875533433221
Q ss_pred CccCHHHhhhCCcce
Q 001638 756 GTNDAPALHEADIGL 770 (1039)
Q Consensus 756 G~ND~~aL~~AdVGI 770 (1039)
|.--+.++.+++-|+
T Consensus 209 Gla~an~laAieaGa 223 (596)
T PRK14042 209 GLASICHYEAVLAGC 223 (596)
T ss_pred CcHHHHHHHHHHhCC
Confidence 112234555555554
No 217
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=33.77 E-value=2.2e+02 Score=31.91 Aligned_cols=75 Identities=24% Similarity=0.347 Sum_probs=48.2
Q ss_pred CEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHHhhcC----CCE
Q 001638 674 ITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVF----KEV 749 (1039)
Q Consensus 674 i~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l~~~~----g~~ 749 (1039)
+..+|+-+....+....|+..++. |++|-.= ...|-|-+.=+..+++++ |.+
T Consensus 100 ~D~I~~R~~~~~~ve~lA~~s~VP-----ViNgLtD-------------------~~HP~Q~LADl~Ti~E~~g~l~g~k 155 (310)
T COG0078 100 VDAIMIRGFSHETLEELAKYSGVP-----VINGLTD-------------------EFHPCQALADLMTIKEHFGSLKGLK 155 (310)
T ss_pred hheEEEecccHHHHHHHHHhCCCc-----eEccccc-------------------ccCcHHHHHHHHHHHHhcCcccCcE
Confidence 677899999999999999999885 3333211 124555544444455543 579
Q ss_pred EEEEcCCccCHH--HhhhCCcceee
Q 001638 750 VAVTGNGTNDAP--ALHEADIGLAM 772 (1039)
Q Consensus 750 V~~~GDG~ND~~--aL~~AdVGIam 772 (1039)
++++|||.|=+. ++..|=.|+-+
T Consensus 156 ~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 156 LAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred EEEEcCcchHHHHHHHHHHHhCCeE
Confidence 999999955444 44444445443
No 218
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=33.20 E-value=8.3e+02 Score=32.14 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=51.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCccc---CcEEEEcCCCcccccEEEEe
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVV---GDIVHLSIGDQVPADGILIS 275 (1039)
Q Consensus 199 d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvv---GDIV~l~~Gd~VPaDgill~ 275 (1039)
..+.-.+.++++++++++.++.++++.++..+..++.... ...|- ++-.. |....+...|.+|-|.++++
T Consensus 120 ~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~------~a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~ 192 (902)
T PRK10517 120 EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSN------TATVL-RVINDKGENGWLEIPIDQLVPGDIIKLA 192 (902)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC------eEEEE-ECCccCCCCeEEEEEHHhCCCCCEEEEC
Confidence 3344455666677788888888887777666555543221 11221 11111 56788889999999998887
Q ss_pred eC-ceeEeccCCCCCC
Q 001638 276 GY-SLTIDESSLSGET 290 (1039)
Q Consensus 276 g~-~l~VDES~LTGEs 290 (1039)
.. .+-+|=-.+.|+.
T Consensus 193 ~Gd~IPaDg~li~g~~ 208 (902)
T PRK10517 193 AGDMIPADLRILQARD 208 (902)
T ss_pred CCCEEeeeEEEEEcCc
Confidence 44 3444544555554
No 219
>PLN02591 tryptophan synthase
Probab=32.91 E-value=2.2e+02 Score=31.23 Aligned_cols=81 Identities=20% Similarity=0.240 Sum_probs=43.2
Q ss_pred ccHHHHHHHHHHCCCE-EEEECCCC-HHHHHHHHHHc-CCCCC-CCceeeCcccccCCHHHHHhhcccceEEEecChhhH
Q 001638 660 PGVREAVETCLAAGIT-VRMVTGDN-IHTAKAIAKEC-GILTD-GGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDK 735 (1039)
Q Consensus 660 ~~v~~aI~~l~~aGi~-v~m~TGD~-~~ta~~iA~~~-GI~~~-~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 735 (1039)
++..+..+.|++.|+. |.++|-.. .+..+.||+.. |..-- ...-++|.. ...|.+-
T Consensus 118 ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~Vs~~GvTG~~--------------------~~~~~~~ 177 (250)
T PLN02591 118 EETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYLVSSTGVTGAR--------------------ASVSGRV 177 (250)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEEeeCCCCcCCC--------------------cCCchhH
Confidence 6667777777777776 44444444 34566666654 22110 000011110 0125555
Q ss_pred HHHHHHHhhcCCCEEEEEcCCccCHH
Q 001638 736 YILVTQLRNVFKEVVAVTGNGTNDAP 761 (1039)
Q Consensus 736 ~~~V~~l~~~~g~~V~~~GDG~ND~~ 761 (1039)
...++.+++. ...-.++|-|+++..
T Consensus 178 ~~~i~~vk~~-~~~Pv~vGFGI~~~e 202 (250)
T PLN02591 178 ESLLQELKEV-TDKPVAVGFGISKPE 202 (250)
T ss_pred HHHHHHHHhc-CCCceEEeCCCCCHH
Confidence 6677888876 455556699998443
No 220
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=32.83 E-value=6.4e+02 Score=33.04 Aligned_cols=21 Identities=29% Similarity=0.460 Sum_probs=13.8
Q ss_pred CcEEEEcCCCcccccEEEEee
Q 001638 256 GDIVHLSIGDQVPADGILISG 276 (1039)
Q Consensus 256 GDIV~l~~Gd~VPaDgill~g 276 (1039)
|....+...|.+|-|.++++.
T Consensus 139 g~~~~I~~~eLv~GDiV~l~~ 159 (867)
T TIGR01524 139 GSMDEVPIDALVPGDLIELAA 159 (867)
T ss_pred CeEEEEEhhcCCCCCEEEECC
Confidence 556666667777777766653
No 221
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.74 E-value=1.6e+02 Score=33.17 Aligned_cols=134 Identities=19% Similarity=0.224 Sum_probs=74.4
Q ss_pred ccCCCCccHHHHHHHHHHCCCE---EEEECCCCHHHH------HHHHHHcCCCCCC------------------------
Q 001638 654 IKDPVRPGVREAVETCLAAGIT---VRMVTGDNIHTA------KAIAKECGILTDG------------------------ 700 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~aGi~---v~m~TGD~~~ta------~~iA~~~GI~~~~------------------------ 700 (1039)
+.+.+|.+.++-++.+++.|++ ..+.-||++... ..-|+++||....
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADED 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456788888889999888875 455668776554 4467788886520
Q ss_pred --CceeeCcccccCCHHHHHhhc------------------ccceEEEecChhhHHHHHHHHhh-cCCCEEEEEcCCccC
Q 001638 701 --GLAIEGTDFRSKNPQEMQELI------------------PKLQVMARSSPTDKYILVTQLRN-VFKEVVAVTGNGTND 759 (1039)
Q Consensus 701 --~~vi~G~~~~~~~~~~~~~~~------------------~~~~v~ar~sP~~K~~~V~~l~~-~~g~~V~~~GDG~ND 759 (1039)
++.+.-+--..+++.++.+.+ ..-.-|.-|||.-=.++++..+- ..|..|+++|-+..=
T Consensus 90 V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 169 (297)
T PRK14167 90 VHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIV 169 (297)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 111111111122222222221 11123455778776666666542 137889999998542
Q ss_pred ----HHHhhh------CCcceeecCCCcH---HHHhccCEEee
Q 001638 760 ----APALHE------ADIGLAMGIAGTE---VAKENADVIIM 789 (1039)
Q Consensus 760 ----~~aL~~------AdVGIamgi~gt~---~ak~~aDivl~ 789 (1039)
+-+|.+ |-|-++- +.|. ..-..|||++.
T Consensus 170 GkPla~lL~~~~~~~~aTVtvch--s~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 170 GKPMANLLIQKADGGNATVTVCH--SRTDDLAAKTRRADIVVA 210 (297)
T ss_pred HHHHHHHHhcCccCCCCEEEEeC--CCCCCHHHHHhhCCEEEE
Confidence 224443 4455543 3332 23467999987
No 222
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=32.66 E-value=1.4e+02 Score=34.12 Aligned_cols=42 Identities=14% Similarity=0.112 Sum_probs=35.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Q 001638 657 PVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT 698 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~ 698 (1039)
+|=.|.++||+..++.|..|.++--|=..|-+..-.++++..
T Consensus 96 ~PGsEmk~AIe~A~e~ga~V~lIDRdI~vTl~R~~~~~~~~E 137 (388)
T COG1916 96 KPGSEMKAAIEAARELGAPVALIDRDIGVTLRRAWAKMPFWE 137 (388)
T ss_pred CChHHHHHHHHHHHHcCCCEEEecccHHHHHHHHHHhCCHHH
Confidence 356778999999999999999999998888888777666543
No 223
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=31.74 E-value=1.5e+02 Score=33.14 Aligned_cols=142 Identities=14% Similarity=0.148 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHhHccCcEEEEEEEecCCCC------C----------cCCCCCCCcEeeeeecccCCCCccHHHHHHHHH
Q 001638 607 RKNLTNVINGFSSEALRTLCLAFQDIKGNH------K----------AESIPENNYTLIAVVGIKDPVRPGVREAVETCL 670 (1039)
Q Consensus 607 ~~~~~~~i~~~a~~glr~l~~A~k~l~~~~------~----------~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~ 670 (1039)
-.++++.+.+++.+|+.++.+..+.=++-. . +.+.+. ...-++++.=-=..+.+..+.++.|+
T Consensus 99 V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~-~~~~v~vvsQTT~~~~~~~~i~~~l~ 177 (280)
T TIGR00216 99 VTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFK-VEDLLGVVSQTTLSQEDTKEIVAELK 177 (280)
T ss_pred cHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCC-CCCcEEEEEcCCCcHHHHHHHHHHHH
Confidence 357888899999999999999865432210 0 000000 01224555544455666677777777
Q ss_pred HCC----C----EEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHHH
Q 001638 671 AAG----I----TVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQL 742 (1039)
Q Consensus 671 ~aG----i----~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~l 742 (1039)
+.. + .++..|-+.+..++.+|+++.+.- |.+.-+...-.++.+..
T Consensus 178 ~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~mi---------------------------VVGg~nSsNT~rL~ei~ 230 (280)
T TIGR00216 178 ARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLMI---------------------------VIGGKNSSNTTRLYEIA 230 (280)
T ss_pred HhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEEE---------------------------EECCCCCchHHHHHHHH
Confidence 655 1 256677777777777777765432 44444444455666667
Q ss_pred hhcCCCEEEEEcCC-ccCHHHhhhCC-cceeecCCCcH
Q 001638 743 RNVFKEVVAVTGNG-TNDAPALHEAD-IGLAMGIAGTE 778 (1039)
Q Consensus 743 ~~~~g~~V~~~GDG-~ND~~aL~~Ad-VGIamgi~gt~ 778 (1039)
++. |..+..+.+- --|...|+.++ |||.-| ..|+
T Consensus 231 ~~~-~~~t~~Ie~~~el~~~~l~~~~~VGiTAG-ASTP 266 (280)
T TIGR00216 231 EEH-GPPSYLIETAEELPEEWLKGVKVVGITAG-ASTP 266 (280)
T ss_pred HHh-CCCEEEECChHHCCHHHhCCCCEEEEEec-CCCC
Confidence 766 6556665443 22445677554 699888 4443
No 224
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.71 E-value=1.7e+02 Score=32.71 Aligned_cols=135 Identities=14% Similarity=0.216 Sum_probs=71.1
Q ss_pred cCCCCccHHHHHHHHHHC-CCE---EEEECCCCHHHH------HHHHHHcCCCCCC------------------------
Q 001638 655 KDPVRPGVREAVETCLAA-GIT---VRMVTGDNIHTA------KAIAKECGILTDG------------------------ 700 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~a-Gi~---v~m~TGD~~~ta------~~iA~~~GI~~~~------------------------ 700 (1039)
.+.++.+.++-++.+++. |++ ..+.-||++... ...|+++||....
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (285)
T PRK14191 10 SYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQN 89 (285)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 345677888888888755 665 455567776554 3467778886410
Q ss_pred --CceeeCcccccCCHHHHHh------------------hcccceEEEecChhhHHHHHHHHhhc-CCCEEEEEcCCcc-
Q 001638 701 --GLAIEGTDFRSKNPQEMQE------------------LIPKLQVMARSSPTDKYILVTQLRNV-FKEVVAVTGNGTN- 758 (1039)
Q Consensus 701 --~~vi~G~~~~~~~~~~~~~------------------~~~~~~v~ar~sP~~K~~~V~~l~~~-~g~~V~~~GDG~N- 758 (1039)
++.+.-+--..++++++.+ +...-.-|.-|||.-=.++++..+-. .|..|+++|.|..
T Consensus 90 V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~V 169 (285)
T PRK14191 90 IDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIV 169 (285)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchh
Confidence 1111111111222222222 22111234557787766777665422 2789999999832
Q ss_pred CHH---Hhhh--CCcceeecCCCcHH--HHhccCEEeec
Q 001638 759 DAP---ALHE--ADIGLAMGIAGTEV--AKENADVIIMD 790 (1039)
Q Consensus 759 D~~---aL~~--AdVGIamgi~gt~~--ak~~aDivl~d 790 (1039)
--| +|.. |.|-++-. ...+. .-..||+++.-
T Consensus 170 G~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 170 GKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCVG 207 (285)
T ss_pred HHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEEe
Confidence 222 4433 44444432 22222 34668888764
No 225
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.56 E-value=1.6e+02 Score=32.81 Aligned_cols=136 Identities=17% Similarity=0.170 Sum_probs=73.8
Q ss_pred cCCCCccHHHHHHHHHHCCCE---EEEECCCCHHHH------HHHHHHcCCCCC--------------------------
Q 001638 655 KDPVRPGVREAVETCLAAGIT---VRMVTGDNIHTA------KAIAKECGILTD-------------------------- 699 (1039)
Q Consensus 655 ~D~lR~~v~~aI~~l~~aGi~---v~m~TGD~~~ta------~~iA~~~GI~~~-------------------------- 699 (1039)
.+.++.+.++.++.+++.|++ ..+.-||++... ...|+++||...
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V 89 (282)
T PRK14166 10 SAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 345677888888888888876 356667776554 446788888641
Q ss_pred CCceeeCcccccCCHHHHHhh------------------ccc-ceEEEecChhhHHHHHHHHhh-cCCCEEEEEcCCccC
Q 001638 700 GGLAIEGTDFRSKNPQEMQEL------------------IPK-LQVMARSSPTDKYILVTQLRN-VFKEVVAVTGNGTND 759 (1039)
Q Consensus 700 ~~~vi~G~~~~~~~~~~~~~~------------------~~~-~~v~ar~sP~~K~~~V~~l~~-~~g~~V~~~GDG~ND 759 (1039)
+++.+.-+--..++++++.+. ... -.-|.-|||.-=.++++...- ..|..|+++|-+..=
T Consensus 90 ~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iV 169 (282)
T PRK14166 90 HGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIV 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 011111111112222222222 111 123455677666666665532 137889999998552
Q ss_pred ----HHHhhhCCcceeecCCCcH---HHHhccCEEeec
Q 001638 760 ----APALHEADIGLAMGIAGTE---VAKENADVIIMD 790 (1039)
Q Consensus 760 ----~~aL~~AdVGIamgi~gt~---~ak~~aDivl~d 790 (1039)
+.+|...|--+.+--+.|. ..-..||+++.-
T Consensus 170 GkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 170 GRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 2255555544443323332 234568888764
No 226
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.45 E-value=4.3e+02 Score=29.53 Aligned_cols=166 Identities=14% Similarity=0.132 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCc--cHHHHHHHHHHCCCEEEEE
Q 001638 602 ISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP--GVREAVETCLAAGITVRMV 679 (1039)
Q Consensus 602 l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~--~v~~aI~~l~~aGi~v~m~ 679 (1039)
+.++.++++.+.++.+..+|.+. .+| ++-..|.+-. =++..++.|++.||++.++
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p-~La----------------------ii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~ 67 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQP-GLA----------------------VILVGDNPASQVYVRNKVKACEDNGFHSLKD 67 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eEE----------------------EEEeCCCchHHHHHHHHHHHHHHcCCEEEEE
Confidence 45667788888888887777543 333 2222333222 2466788999999987665
Q ss_pred CCC---CHHHHHHHHHHcCCCCC-CCceeeCcccccCCHHHHH------------------hhcccceEEEecChhhHHH
Q 001638 680 TGD---NIHTAKAIAKECGILTD-GGLAIEGTDFRSKNPQEMQ------------------ELIPKLQVMARSSPTDKYI 737 (1039)
Q Consensus 680 TGD---~~~ta~~iA~~~GI~~~-~~~vi~G~~~~~~~~~~~~------------------~~~~~~~v~ar~sP~~K~~ 737 (1039)
-=+ .++.....=+++.=+.+ +++.+.-+--..++++++. .+...-..|.-|||.-=.+
T Consensus 68 ~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~ 147 (285)
T PRK14189 68 RYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMK 147 (285)
T ss_pred ECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHH
Confidence 433 23333344444433221 1222222222233333322 2222223456677776666
Q ss_pred HHHHHhhc-CCCEEEEEcCCcc-CH---HHhhhCCcceeecCCCcH---HHHhccCEEeec
Q 001638 738 LVTQLRNV-FKEVVAVTGNGTN-DA---PALHEADIGLAMGIAGTE---VAKENADVIIMD 790 (1039)
Q Consensus 738 ~V~~l~~~-~g~~V~~~GDG~N-D~---~aL~~AdVGIamgi~gt~---~ak~~aDivl~d 790 (1039)
+++..+-. .|..|.++|-|.. -- .+|...+.-+.+-.+.|. ..-..||+++.-
T Consensus 148 lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 148 MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 66655311 2788999999865 22 255555544433322332 244678998864
No 227
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.40 E-value=1.6e+02 Score=32.83 Aligned_cols=45 Identities=24% Similarity=0.392 Sum_probs=31.2
Q ss_pred ccCCCCccHHHHHHHHHHCCCE---EEEECCCCHHHH------HHHHHHcCCCC
Q 001638 654 IKDPVRPGVREAVETCLAAGIT---VRMVTGDNIHTA------KAIAKECGILT 698 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~aGi~---v~m~TGD~~~ta------~~iA~~~GI~~ 698 (1039)
+.+.+|.+.++.++.+++.|++ ..+.-||++... ...|+++||..
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456778888888888887875 344467776543 45677888864
No 228
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=30.31 E-value=1.4e+02 Score=30.73 Aligned_cols=107 Identities=12% Similarity=0.115 Sum_probs=64.2
Q ss_pred cHHHHHHHHHHCCCEEEEECCCCHHH-HHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHH
Q 001638 661 GVREAVETCLAAGITVRMVTGDNIHT-AKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILV 739 (1039)
Q Consensus 661 ~v~~aI~~l~~aGi~v~m~TGD~~~t-a~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V 739 (1039)
|.-++++.+++.|-++.+++=++... ...++.-+|+. +..+.=.++++=...+
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~--------------------------i~~~~~~~~~e~~~~i 118 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD--------------------------IKIYPYDSEEEIEAAI 118 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E--------------------------EEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc--------------------------eEEEEECCHHHHHHHH
Confidence 34455555555555666655554443 45555555542 3355666788888899
Q ss_pred HHHhhcCCCEEEEEcCCccCHHHhhhCCcceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHHHHH
Q 001638 740 TQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQK 812 (1039)
Q Consensus 740 ~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~nI~k 812 (1039)
+.+++. |- -+.+|++.- ...-+ +..-..++...+..+|..++.+++++++..++
T Consensus 119 ~~~~~~-G~-~viVGg~~~-~~~A~----------------~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 119 KQAKAE-GV-DVIVGGGVV-CRLAR----------------KLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHT-T---EEEESHHH-HHHHH----------------HTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-CC-cEEECCHHH-HHHHH----------------HcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 999888 74 445577631 11112 22234667777899999999999999987764
No 229
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=29.87 E-value=70 Score=27.59 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=29.7
Q ss_pred CCEEEEEcCC-ccCHHHhhhCCc---ceeecCCCcHHH---HhccCEEeec
Q 001638 747 KEVVAVTGNG-TNDAPALHEADI---GLAMGIAGTEVA---KENADVIIMD 790 (1039)
Q Consensus 747 g~~V~~~GDG-~ND~~aL~~AdV---GIamgi~gt~~a---k~~aDivl~d 790 (1039)
...+.|+||. ..|..+=+++++ ++.-|....+.. ...+|+|+-+
T Consensus 21 ~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 21 PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 3568999999 999999999986 333342222332 2578998753
No 230
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.50 E-value=1.8e+02 Score=32.34 Aligned_cols=65 Identities=20% Similarity=0.288 Sum_probs=37.6
Q ss_pred EEEecChhhHHHHHHHHhh-cCCCEEEEEcCC-ccCHH---HhhhCCcceeecCCCcH---HHHhccCEEeec
Q 001638 726 VMARSSPTDKYILVTQLRN-VFKEVVAVTGNG-TNDAP---ALHEADIGLAMGIAGTE---VAKENADVIIMD 790 (1039)
Q Consensus 726 v~ar~sP~~K~~~V~~l~~-~~g~~V~~~GDG-~ND~~---aL~~AdVGIamgi~gt~---~ak~~aDivl~d 790 (1039)
-|.-|||.-=.++++...- ..|..|.++|.+ .-=-| +|...+--+..--+.+. ..-..||+++.-
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 3556777776666666532 137899999998 33444 55444433333222332 234568888864
No 231
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=28.49 E-value=2.3e+02 Score=31.26 Aligned_cols=30 Identities=10% Similarity=0.205 Sum_probs=18.1
Q ss_pred hhhHHHHHHHHhhcCCCEEEEEcCCccCHHH
Q 001638 732 PTDKYILVTQLRNVFKEVVAVTGNGTNDAPA 762 (1039)
Q Consensus 732 P~~K~~~V~~l~~~~g~~V~~~GDG~ND~~a 762 (1039)
+++-.++++.+++..+. -.++|=|+|+...
T Consensus 187 ~~~~~~~i~~ir~~t~~-Pi~vGFGI~~~e~ 216 (263)
T CHL00200 187 DKKLKKLIETIKKMTNK-PIILGFGISTSEQ 216 (263)
T ss_pred cHHHHHHHHHHHHhcCC-CEEEECCcCCHHH
Confidence 34445677777766333 3445888885543
No 232
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=28.05 E-value=9.7e+02 Score=31.52 Aligned_cols=160 Identities=15% Similarity=0.097 Sum_probs=83.7
Q ss_pred eCCeEEEEEcCCcccCcEEEEcCCCcccccEEEEeeCceeEeccCC------------CCCCCc-cccC---CCCceeec
Q 001638 241 RDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYSLTIDESSL------------SGETEP-VHIN---RDRPFLLS 304 (1039)
Q Consensus 241 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDES~L------------TGEs~p-v~k~---~~~~~l~s 304 (1039)
.-|....+...|.+|-|.+.++. +.+=+|=-.+.|++.-|+-... .|+..+ ..+. -.+..+.+
T Consensus 173 v~GDiV~l~~Gd~IPaDg~li~g-~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~ 251 (903)
T PRK15122 173 VPGDIVHLSAGDMIPADVRLIES-RDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVS 251 (903)
T ss_pred CCCCEEEECCCCEEeeeEEEEEc-CceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEe
Confidence 35888999999999999998874 3355666667777654444321 122111 1111 12345777
Q ss_pred ccEEeeCCeEEEEEEeccchhhHHHHHHhccCCC---CCCchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001638 305 GTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGE---DETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHH 381 (1039)
Q Consensus 305 Gt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~---~~tplq~~l~~~a~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~ 381 (1039)
|+-..-=..++.=+..|.=. +.+..-..... +-.++.+.+..++..+..+.++++.+... .+.
T Consensus 252 G~~~~~V~atG~~T~~gkI~---~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~----~~~------- 317 (903)
T PRK15122 252 GTATAVVVATGSRTYFGSLA---KSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKG----DWL------- 317 (903)
T ss_pred eeEEEEEEEeccccHhhHHH---HHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC----CHH-------
Confidence 76443222222223333211 11111111111 11346667777777776665555443221 110
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHhhhcCchhHHHHHHHHHHH
Q 001638 382 QIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAM 425 (1039)
Q Consensus 382 ~~~~w~~~~~~~~~~~~~~ai~ilvvavP~~Lplavtl~la~~~ 425 (1039)
..+...+..+++.+..+.|..+++++..+.....
T Consensus 318 ----------~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~ma 351 (903)
T PRK15122 318 ----------EALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMA 351 (903)
T ss_pred ----------HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 1122345567777777788888888887764433
No 233
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=27.75 E-value=93 Score=31.90 Aligned_cols=41 Identities=20% Similarity=0.249 Sum_probs=31.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEC-CCCHHHHHHHHHHcCCC
Q 001638 657 PVRPGVREAVETCLAAGITVRMVT-GDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 657 ~lR~~v~~aI~~l~~aGi~v~m~T-GD~~~ta~~iA~~~GI~ 697 (1039)
.+-|++++.++.|++.|+++.+.| -+.+..|+.+-+.++|.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 367999999999999999999999 58899999999999997
No 234
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.61 E-value=2.2e+02 Score=26.51 Aligned_cols=31 Identities=10% Similarity=0.221 Sum_probs=18.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 001638 954 IFSSWVFIAVLVATVGFQVIIVELLGTFATT 984 (1039)
Q Consensus 954 ~~~n~~f~~~~~~~~~~q~~~v~~~~~~~~~ 984 (1039)
++++.-.+..++.+++..+++-.++|.+++-
T Consensus 38 ~~~~l~~~g~IG~~~v~pil~G~~lG~WLD~ 68 (100)
T TIGR02230 38 IWEGLGMFGLIGWSVAIPTLLGVAVGIWLDR 68 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555666666666666665666666554
No 235
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=27.53 E-value=33 Score=30.66 Aligned_cols=20 Identities=35% Similarity=0.650 Sum_probs=15.5
Q ss_pred cCCcccCcEEEE-cCCCcccc
Q 001638 250 IYDLVVGDIVHL-SIGDQVPA 269 (1039)
Q Consensus 250 ~~dLvvGDIV~l-~~Gd~VPa 269 (1039)
-.+|.+||.|.+ +.||.||-
T Consensus 47 ~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 47 ELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HTT-BBT-EEEEEEETTTEEE
T ss_pred HcCCCCCCEEEEEECCCccce
Confidence 468999999988 58999996
No 236
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=27.48 E-value=85 Score=30.96 Aligned_cols=83 Identities=17% Similarity=0.227 Sum_probs=54.5
Q ss_pred HHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCC-E-EEEECCCC------HHH
Q 001638 615 NGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGI-T-VRMVTGDN------IHT 686 (1039)
Q Consensus 615 ~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi-~-v~m~TGD~------~~t 686 (1039)
.-+...|++|+.+....-.++ -.....+.+-.++|+-.+.-...+.+++.++.|++.|. . .+++-|-- +..
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e~-i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~ 103 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQEE-FIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEE 103 (137)
T ss_pred HHHHHCCCEEEECCCCCCHHH-HHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHH
Confidence 345678999998773221110 00112245667888888888999999999999999966 2 34555543 455
Q ss_pred HHHHHHHcCCCC
Q 001638 687 AKAIAKECGILT 698 (1039)
Q Consensus 687 a~~iA~~~GI~~ 698 (1039)
...-++++|+..
T Consensus 104 ~~~~l~~~G~~~ 115 (137)
T PRK02261 104 VEKKFKEMGFDR 115 (137)
T ss_pred HHHHHHHcCCCE
Confidence 566788888754
No 237
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.41 E-value=90 Score=34.87 Aligned_cols=45 Identities=24% Similarity=0.442 Sum_probs=32.5
Q ss_pred ccCCCCccHHHHHHHHHHCCCEE---EEECCCCHHHH------HHHHHHcCCCC
Q 001638 654 IKDPVRPGVREAVETCLAAGITV---RMVTGDNIHTA------KAIAKECGILT 698 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~aGi~v---~m~TGD~~~ta------~~iA~~~GI~~ 698 (1039)
+.+.++.+.++.++.+++.|++. .++-||++... ..-|+++||..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 34567888889999998888763 55578876654 34677888865
No 238
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.22 E-value=2.5e+02 Score=31.59 Aligned_cols=45 Identities=18% Similarity=0.341 Sum_probs=30.4
Q ss_pred ccCCCCccHHHHHHHHHHC-CCE---EEEECCCCHHHH------HHHHHHcCCCC
Q 001638 654 IKDPVRPGVREAVETCLAA-GIT---VRMVTGDNIHTA------KAIAKECGILT 698 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~a-Gi~---v~m~TGD~~~ta------~~iA~~~GI~~ 698 (1039)
+.+.+|++.++.++.+++. |++ +.+.-||++... ..-|+++||..
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~ 64 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIAS 64 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 3456778888888888766 665 355667776554 34677788865
No 239
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.84 E-value=2.1e+02 Score=31.15 Aligned_cols=134 Identities=14% Similarity=0.149 Sum_probs=72.5
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceee-Cccccc-----CCHHHHHhhcccceEEEecC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIE-GTDFRS-----KNPQEMQELIPKLQVMARSS 731 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~-G~~~~~-----~~~~~~~~~~~~~~v~ar~s 731 (1039)
+|+|+.+..+.|++.+|.+.++|.---.....+-++.+-..++..+++ =.+|+. -..+.+.. .|.+-+
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lih------tfnkn~ 212 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIH------TFNKNS 212 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHH------HHccch
Confidence 589999999999999999999997776666666555544433221111 111110 00111111 222222
Q ss_pred hhhHHHHHHHHhh-cCCCEEEEEcCCccCHHHhhhC-------CcceeecCCCcH---HHHhccCEEeecCCchHHHHH
Q 001638 732 PTDKYILVTQLRN-VFKEVVAVTGNGTNDAPALHEA-------DIGLAMGIAGTE---VAKENADVIIMDDNFTTIVTV 799 (1039)
Q Consensus 732 P~~K~~~V~~l~~-~~g~~V~~~GDG~ND~~aL~~A-------dVGIamgi~gt~---~ak~~aDivl~dd~f~~i~~~ 799 (1039)
..-|. .-..+.. ..+..|...||..-|+.|-..+ .+|.-.+ .+-+ --++.-||+|.+|....++.-
T Consensus 213 ~v~~~-~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l~d-~vee~~~~ymd~ydIvL~~D~tldv~~s 289 (298)
T KOG3128|consen 213 SVLQN-ESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIGYLND-SVEEALEKYMDSYDIVLVHDETLDVANS 289 (298)
T ss_pred HHHHh-hhHHHhhccCCceEEEeccccccchhhcCCcccccceeeecccc-hHHHHHHHHHhhcceEEecCcccchhHH
Confidence 11110 0011111 1145677789999998864322 2343222 2222 245678999999987766653
No 240
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=26.80 E-value=9.1e+02 Score=26.84 Aligned_cols=23 Identities=30% Similarity=0.325 Sum_probs=12.8
Q ss_pred cCCChHHHHHHHHHHHHHHHHHH
Q 001638 985 VPLNWKLWLASVVIGAISMPFGV 1007 (1039)
Q Consensus 985 ~~l~~~~w~~~i~~~~~~~~~~~ 1007 (1039)
.|+.+..=+++++++..++++|+
T Consensus 208 gplgI~~slv~v~iAa~sLllDF 230 (274)
T PF12811_consen 208 GPLGIGFSLVVVGIAALSLLLDF 230 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHhhH
Confidence 44444444555566666666654
No 241
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=26.38 E-value=53 Score=35.55 Aligned_cols=96 Identities=13% Similarity=0.046 Sum_probs=50.3
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHH
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYIL 738 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 738 (1039)
-+++.++++.|++.|++. ++|......+.......|.-. -+ ..+...-.+...+..-+|+-=...
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~---------~~-----~~i~~~g~~~~~~gKP~~~~~~~~ 204 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY---------YA-----ELIKQLGGKVIYSGKPYPAIFHKA 204 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH---------HH-----HHHHHhCCcEecCCCCCHHHHHHH
Confidence 478999999999999997 777765544432222222110 00 000000111111222233222233
Q ss_pred HHHHhhcCCCEEEEEcCC-ccCHHHhhhCCcc
Q 001638 739 VTQLRNVFKEVVAVTGNG-TNDAPALHEADIG 769 (1039)
Q Consensus 739 V~~l~~~~g~~V~~~GDG-~ND~~aL~~AdVG 769 (1039)
.+.+.....+.++|+||. .+|..+=+.|++-
T Consensus 205 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 205 LKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 333322112469999999 5999998888764
No 242
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=26.35 E-value=1.1e+02 Score=29.16 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=29.6
Q ss_pred CCccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Q 001638 658 VRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 658 lR~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
--+++.++++.+++.|++++.+|++.. -...|.+-|+.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~~ 92 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGVP 92 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCCc
Confidence 357899999999999999999999874 33456655543
No 243
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=26.22 E-value=1.4e+03 Score=29.90 Aligned_cols=20 Identities=30% Similarity=0.502 Sum_probs=9.5
Q ss_pred CcEEEEcCCCcccccEEEEe
Q 001638 256 GDIVHLSIGDQVPADGILIS 275 (1039)
Q Consensus 256 GDIV~l~~Gd~VPaDgill~ 275 (1039)
|....+...|.+|-|.++++
T Consensus 125 g~~~~I~~~eLv~GDiv~l~ 144 (884)
T TIGR01522 125 GKLEHVLASTLVPGDLVCLS 144 (884)
T ss_pred CEEEEEEHHHCccCCEEEec
Confidence 44444444455555554443
No 244
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=26.14 E-value=1.4e+03 Score=28.94 Aligned_cols=84 Identities=13% Similarity=0.053 Sum_probs=49.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeCCeEEEEEcCCcccCc-EEEEcCCCcccccEEEEe
Q 001638 197 VYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGD-IVHLSIGDQVPADGILIS 275 (1039)
Q Consensus 197 ~~d~~~i~~~lllv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGD-IV~l~~Gd~VPaDgill~ 275 (1039)
|.+++.+.+.+++.+++..+.+.+++.+.++..+..++..- .....+ +.-|. ...+...|.+|-|.++++
T Consensus 62 ~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~-----~~~a~v----ir~g~~~~~V~~~eL~~GDiV~v~ 132 (679)
T PRK01122 62 AGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKK-----DTFARK----LREPGAAEEVPATELRKGDIVLVE 132 (679)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----CCeEEE----EECCCEEEEEEHHHcCCCCEEEEc
Confidence 34566667777777777777776776555544444433211 111111 23355 678889999999999887
Q ss_pred eC-ceeEeccCCCCC
Q 001638 276 GY-SLTIDESSLSGE 289 (1039)
Q Consensus 276 g~-~l~VDES~LTGE 289 (1039)
.. .+-+|=-.+.|+
T Consensus 133 ~Gd~IPaDG~vieG~ 147 (679)
T PRK01122 133 AGEIIPADGEVIEGV 147 (679)
T ss_pred CCCEEEEEEEEEEcc
Confidence 44 344554455554
No 245
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=25.87 E-value=34 Score=35.03 Aligned_cols=13 Identities=38% Similarity=0.465 Sum_probs=12.2
Q ss_pred EEecCcCccccCc
Q 001638 450 ICTDKTGTLTTNH 462 (1039)
Q Consensus 450 Ic~DKTGTLT~n~ 462 (1039)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999998
No 246
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=24.84 E-value=48 Score=31.82 Aligned_cols=82 Identities=11% Similarity=0.118 Sum_probs=53.2
Q ss_pred HHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCC-E-EEEECCCCHHHHHHHHHH
Q 001638 616 GFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGI-T-VRMVTGDNIHTAKAIAKE 693 (1039)
Q Consensus 616 ~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi-~-v~m~TGD~~~ta~~iA~~ 693 (1039)
-+...|++|+.+.-. .+.++-.....+.+-.++++-+......+.+++.++.|+++|. + .+++-|..+..-.+-.++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~ 100 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKE 100 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH
Confidence 356778888766521 1110000112245666788888888889999999999999977 4 456666655544566778
Q ss_pred cCCCC
Q 001638 694 CGILT 698 (1039)
Q Consensus 694 ~GI~~ 698 (1039)
.|+..
T Consensus 101 ~G~d~ 105 (122)
T cd02071 101 MGVAE 105 (122)
T ss_pred CCCCE
Confidence 99865
No 247
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=24.78 E-value=1e+02 Score=30.40 Aligned_cols=82 Identities=16% Similarity=0.166 Sum_probs=49.8
Q ss_pred HHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeecccCCCCccHHHHHHHHHHCCC--EEEEECCCC---H---HHH
Q 001638 616 GFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGI--TVRMVTGDN---I---HTA 687 (1039)
Q Consensus 616 ~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~i~D~lR~~v~~aI~~l~~aGi--~v~m~TGD~---~---~ta 687 (1039)
-+...|++|+-+....-.++ --+...+.+-.++|+-++-=.--+..++.++.|+++|. .++++-|-. . ...
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~-~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~ 102 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEE-FIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDV 102 (134)
T ss_pred HHHHCCCEEEECCCCCCHHH-HHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHH
Confidence 34567888876663221110 00012244666777777776777788999999999997 355666632 1 122
Q ss_pred HHHHHHcCCCC
Q 001638 688 KAIAKECGILT 698 (1039)
Q Consensus 688 ~~iA~~~GI~~ 698 (1039)
+.-++++|+..
T Consensus 103 ~~~l~~~Gv~~ 113 (134)
T TIGR01501 103 EKRFKEMGFDR 113 (134)
T ss_pred HHHHHHcCCCE
Confidence 44578899765
No 248
>TIGR00559 pdxJ pyridoxine 5'-phosphate synthase. PdxJ is required in the biosynthesis of pyridoxine (vitamin B6), a precursor to the enzyme cofactor pyridoxal phosphate. ECOCYC describes the predicted reaction equation as 1-amino-propan-2-one-3-phosphate + deoxyxylulose-5-phosphate = pyridoxine-5'-phosphate. The product of that reaction is oxidized by PdxH to pyridoxal 5'-phosphate.
Probab=24.57 E-value=2e+02 Score=31.05 Aligned_cols=38 Identities=29% Similarity=0.248 Sum_probs=32.7
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~ 697 (1039)
++..++.|++|+++||+|-++ =|+.......|+++|-.
T Consensus 109 ~~~l~~~i~~l~~~gI~VSLF-iDP~~~qi~~A~~~GAd 146 (237)
T TIGR00559 109 KDKLCELVKRFHAAGIEVSLF-IDADKDQISAAAEVGAD 146 (237)
T ss_pred HHHHHHHHHHHHHCCCEEEEE-eCCCHHHHHHHHHhCcC
Confidence 456789999999999999998 67778888899999975
No 249
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=23.90 E-value=1.7e+02 Score=33.20 Aligned_cols=90 Identities=28% Similarity=0.319 Sum_probs=58.4
Q ss_pred HHHHHHHCCCE--EE-EECCCCHH---HHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHH
Q 001638 665 AVETCLAAGIT--VR-MVTGDNIH---TAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYIL 738 (1039)
Q Consensus 665 aI~~l~~aGi~--v~-m~TGD~~~---ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 738 (1039)
.|-.|-..||- ++ =+|+|+.+ .+..|-+.||+-..+..+++=+ -++|+. -|-..+
T Consensus 215 gig~LL~~GIGDTIRVSLT~dP~~EV~va~~IL~slglr~~g~~iiSCP------------------tCGR~~-~dl~~~ 275 (346)
T TIGR00612 215 GIGILLARGIGDTIRVSLTDDPTHEVPVAFEILQSLGLRARGVEIVACP------------------SCGRTG-FDVEKV 275 (346)
T ss_pred HHHHHHhhCCCCeEEEECCCCcHHHHHHHHHHHHHcCCCcCCCeEEECC------------------CCCCcC-CCHHHH
Confidence 46777788873 33 37899865 4567888899976544444322 234443 222333
Q ss_pred HHHH----hhc-CCCEEEEEcCCccCHHHhhhCCcceeec
Q 001638 739 VTQL----RNV-FKEVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 739 V~~l----~~~-~g~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
++.+ +.. .+-.||+.|==+|-..--+.||+|||-|
T Consensus 276 ~~~ve~~l~~~~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 276 VRRVQEALFHLKTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred HHHHHHHHhcCCCCCEEEEECceecCCchhhccCeeeecC
Confidence 3332 221 1357999999999999999999999976
No 250
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=23.78 E-value=8.8e+02 Score=25.61 Aligned_cols=175 Identities=15% Similarity=0.183 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCc--EeeeeecccCCCCccHHHHHHHHHHCCCEEEEECCCCHH
Q 001638 608 KNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNY--TLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIH 685 (1039)
Q Consensus 608 ~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l--~~lG~v~i~D~lR~~v~~aI~~l~~aGi~v~m~TGD~~~ 685 (1039)
+...+..+.+..-|.|++=+.++.-...+.-....+.-. ..+|.=.+-++ +-++.+.++|-+..+..+++..
T Consensus 22 ~~~~~~~~a~~~gGi~~iEvt~~~~~~~~~i~~l~~~~~~~~~iGaGTV~~~------~~~~~a~~aGA~fivsp~~~~~ 95 (206)
T PRK09140 22 DEALAHVGALIEAGFRAIEIPLNSPDPFDSIAALVKALGDRALIGAGTVLSP------EQVDRLADAGGRLIVTPNTDPE 95 (206)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHHHHHcCCCcEEeEEecCCH------HHHHHHHHcCCCEEECCCCCHH
Q ss_pred HHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhh--HHHHHHHHhhcCC--CEEEEEcCCcc--C
Q 001638 686 TAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTD--KYILVTQLRNVFK--EVVAVTGNGTN--D 759 (1039)
Q Consensus 686 ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~--K~~~V~~l~~~~g--~~V~~~GDG~N--D 759 (1039)
.+++ +++.|+ .++.| -.+++|+.+....-.=+-..-|.+ ....++.+++.+. -.+..+| |+| +
T Consensus 96 v~~~-~~~~~~-----~~~~G----~~t~~E~~~A~~~Gad~vk~Fpa~~~G~~~l~~l~~~~~~~ipvvaiG-GI~~~n 164 (206)
T PRK09140 96 VIRR-AVALGM-----VVMPG----VATPTEAFAALRAGAQALKLFPASQLGPAGIKALRAVLPPDVPVFAVG-GVTPEN 164 (206)
T ss_pred HHHH-HHHCCC-----cEEcc----cCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHhhcCCCCeEEEEC-CCCHHH
Q ss_pred HHHhhhCCc-ceeecCCCcHHHHhccCEEeecCCchHHHHHHHHhHHHHHH
Q 001638 760 APALHEADI-GLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYIN 809 (1039)
Q Consensus 760 ~~aL~~AdV-GIamgi~gt~~ak~~aDivl~dd~f~~i~~~i~~gR~~~~n 809 (1039)
++.+.+|++ |++++ +.+.=.+++...+....+.-+...++
T Consensus 165 ~~~~~~aGa~~vav~----------s~l~~~~~~~~~i~~~a~~~~~~~~~ 205 (206)
T PRK09140 165 LAPYLAAGAAGFGLG----------SALYRPGQSAEEVAERARAFVAAYRE 205 (206)
T ss_pred HHHHHHCCCeEEEEe----------hHhcccccChHHHHHHHHHHHHHHhh
No 251
>PF15584 Imm44: Immunity protein 44
Probab=23.78 E-value=35 Score=30.90 Aligned_cols=19 Identities=26% Similarity=0.485 Sum_probs=15.2
Q ss_pred cCcEEEEcCCCcccccEEE
Q 001638 255 VGDIVHLSIGDQVPADGIL 273 (1039)
Q Consensus 255 vGDIV~l~~Gd~VPaDgil 273 (1039)
+.+-..++.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 3455678899999999986
No 252
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=23.71 E-value=1.4e+02 Score=26.25 Aligned_cols=47 Identities=19% Similarity=0.187 Sum_probs=38.2
Q ss_pred eecccCCCCccHHHHHHHHHHCCCEEEE-ECCCCHHHHHHHHHHcCCC
Q 001638 651 VVGIKDPVRPGVREAVETCLAAGITVRM-VTGDNIHTAKAIAKECGIL 697 (1039)
Q Consensus 651 ~v~i~D~lR~~v~~aI~~l~~aGi~v~m-~TGD~~~ta~~iA~~~GI~ 697 (1039)
++.+.+..++.+.+..+.|+++|++|.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445567788899999999999999988 5777777777888889975
No 253
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=23.52 E-value=2.6e+02 Score=31.53 Aligned_cols=143 Identities=10% Similarity=0.108 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHhHccCcEEEEEEEecCCCC-----C-----------cCCCCC-CCcEeeeeecccCCCCccHHHHHHHH
Q 001638 607 RKNLTNVINGFSSEALRTLCLAFQDIKGNH-----K-----------AESIPE-NNYTLIAVVGIKDPVRPGVREAVETC 669 (1039)
Q Consensus 607 ~~~~~~~i~~~a~~glr~l~~A~k~l~~~~-----~-----------~~~~~e-~~l~~lG~v~i~D~lR~~v~~aI~~l 669 (1039)
-.++++.+..++.+||.++.+..+.=++-. . +.+.+. .+..=++++.=-=..+.+..+.++.+
T Consensus 99 V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l 178 (298)
T PRK01045 99 VTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEIIAAL 178 (298)
T ss_pred chHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHH
Confidence 357888899999999999999854322110 0 000000 11122344443333445555555555
Q ss_pred HHCCCE--------EEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHHHH
Q 001638 670 LAAGIT--------VRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQ 741 (1039)
Q Consensus 670 ~~aGi~--------v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V~~ 741 (1039)
++..-. ++..|-+.+..++.+|+++...- |.+.-+...-.++.+.
T Consensus 179 ~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~mi---------------------------VVGg~~SsNT~kL~~i 231 (298)
T PRK01045 179 KERFPEIQGPPKDDICYATQNRQEAVKELAPQADLVI---------------------------VVGSKNSSNSNRLREV 231 (298)
T ss_pred HHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEEE---------------------------EECCCCCccHHHHHHH
Confidence 554322 24455666666666666554321 4444444444566666
Q ss_pred HhhcCCCEEEEEcCC-ccCHHHhhhC-CcceeecCCCcH
Q 001638 742 LRNVFKEVVAVTGNG-TNDAPALHEA-DIGLAMGIAGTE 778 (1039)
Q Consensus 742 l~~~~g~~V~~~GDG-~ND~~aL~~A-dVGIamgi~gt~ 778 (1039)
.++. +..+..+.+- --|...|+.. .|||.-| ..|+
T Consensus 232 ~~~~-~~~t~~Ie~~~el~~~~l~~~~~VGitaG-ASTP 268 (298)
T PRK01045 232 AEEA-GAPAYLIDDASEIDPEWFKGVKTVGVTAG-ASAP 268 (298)
T ss_pred HHHH-CCCEEEECChHHCcHHHhcCCCEEEEEec-CCCC
Confidence 6666 6555565442 2244456644 5899888 4443
No 254
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=23.52 E-value=1.5e+02 Score=36.72 Aligned_cols=74 Identities=19% Similarity=0.328 Sum_probs=47.3
Q ss_pred cCCcccCcEEEE-cCCCcccc-cEEEEeeCceeEeccCCCCCCCccccCCCCceeecccEEeeCCeEEEEEEeccchhhH
Q 001638 250 IYDLVVGDIVHL-SIGDQVPA-DGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWG 327 (1039)
Q Consensus 250 ~~dLvvGDIV~l-~~Gd~VPa-Dgill~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g 327 (1039)
-.||.+||-|.+ ++||+||- ++++ ...=+|+..|..--..- =..||.+......+..-+++..+.-+
T Consensus 365 rkdIrIGDtV~V~kAGdVIP~V~~Vv---------~e~R~~~~~~~~~P~~C--P~C~s~l~r~~~e~~~rC~n~~~C~a 433 (667)
T COG0272 365 RKDIRIGDTVVVRKAGDVIPQVVGVV---------LEKRPGNEKPIPFPTHC--PVCGSELVREEGEVVIRCTNGLNCPA 433 (667)
T ss_pred hcCCCCCCEEEEEecCCCCcceeeee---------cccCCCCCCCCCCCCCC--CCCCCeeEeccCceeEecCCCCCChH
Confidence 489999999998 58999996 3333 33334555554321112 25688888877777788888555455
Q ss_pred HHHHHhc
Q 001638 328 RLMVTLS 334 (1039)
Q Consensus 328 ki~~~~~ 334 (1039)
+....+.
T Consensus 434 q~~e~l~ 440 (667)
T COG0272 434 QLKERLI 440 (667)
T ss_pred HHhhhee
Confidence 5555544
No 255
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=23.45 E-value=8.2e+02 Score=27.78 Aligned_cols=141 Identities=18% Similarity=0.249 Sum_probs=72.7
Q ss_pred cCCHHHHHHHHHHHHHHhHccCcEEEEEEEecCCCCCcCCCCCCCcEeeeeec--ccCCCCccHHHHH-HHHHHCCCEEE
Q 001638 601 PISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVG--IKDPVRPGVREAV-ETCLAAGITVR 677 (1039)
Q Consensus 601 ~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~l~~~~~~~~~~e~~l~~lG~v~--i~D~lR~~v~~aI-~~l~~aGi~v~ 677 (1039)
.++++.|+++.+.++++. |+.=..|. . ...+.-..+|++. +.+|.-.+....| +.|++.|+.+.
T Consensus 26 ~Vs~eTr~kV~~a~~elg---Y~pN~~Ar-~---------L~~~~s~~Ig~i~p~~~~~~~~~i~~gi~~~~~~~gy~~~ 92 (333)
T COG1609 26 YVSEETREKVLAAIKELG---YRPNAVAR-S---------LRTGRTKTIGLVVPDITNPFFAEILKGIEEAAREAGYSLL 92 (333)
T ss_pred CCCHHHHHHHHHHHHHHC---CCCCHHHH-H---------HHhCCCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEE
Confidence 478899999998887763 22111110 0 0011223445442 3344444554444 46788999988
Q ss_pred EECCCC-HHHHH---HHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChh------------hHHHHHHH
Q 001638 678 MVTGDN-IHTAK---AIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPT------------DKYILVTQ 741 (1039)
Q Consensus 678 m~TGD~-~~ta~---~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~------------~K~~~V~~ 741 (1039)
+...++ .+.-. ..-.+-+. +++++.+........+.+.+.-..+.++.|..+. .-...++.
T Consensus 93 l~~~~~~~~~e~~~~~~l~~~~v---dGiIi~~~~~~~~~~~~l~~~~~P~V~i~~~~~~~~~~~V~~Dn~~~~~~a~~~ 169 (333)
T COG1609 93 LANTDDDPEKEREYLETLLQKRV---DGLILLGERPNDSLLELLAAAGIPVVVIDRSPPGLGVPSVGIDNFAGAYLATEH 169 (333)
T ss_pred EECCCCCHHHHHHHHHHHHHcCC---CEEEEecCCCCHHHHHHHHhcCCCEEEEeCCCccCCCCEEEEChHHHHHHHHHH
Confidence 888886 33222 22222222 4566666332222223333332333344444331 23457888
Q ss_pred HhhcCCCEEEEEcCCc
Q 001638 742 LRNVFKEVVAVTGNGT 757 (1039)
Q Consensus 742 l~~~~g~~V~~~GDG~ 757 (1039)
|.+.+.+.++++|.+.
T Consensus 170 L~~~G~~~i~~i~~~~ 185 (333)
T COG1609 170 LIELGHRRIAFIGGPL 185 (333)
T ss_pred HHHCCCceEEEEeCCC
Confidence 8887335588887764
No 256
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=22.41 E-value=3.8e+02 Score=30.81 Aligned_cols=45 Identities=20% Similarity=0.321 Sum_probs=32.2
Q ss_pred ccCCCCccHHHHHHHHHHC-CCE---EEEECCCCHHHH------HHHHHHcCCCC
Q 001638 654 IKDPVRPGVREAVETCLAA-GIT---VRMVTGDNIHTA------KAIAKECGILT 698 (1039)
Q Consensus 654 i~D~lR~~v~~aI~~l~~a-Gi~---v~m~TGD~~~ta------~~iA~~~GI~~ 698 (1039)
+.+.++.+.++.++.+++. |++ +.++-||++... ..-|+++||..
T Consensus 64 vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~ 118 (345)
T PLN02897 64 IAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKS 118 (345)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEE
Confidence 5567788888889888877 665 446677776554 34677888864
No 257
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=21.95 E-value=3e+02 Score=31.34 Aligned_cols=84 Identities=17% Similarity=0.248 Sum_probs=59.9
Q ss_pred eecccCCCCccHHHHHHHHHHC-CCEEEEECCCC--HHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEE
Q 001638 651 VVGIKDPVRPGVREAVETCLAA-GITVRMVTGDN--IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVM 727 (1039)
Q Consensus 651 ~v~i~D~lR~~v~~aI~~l~~a-Gi~v~m~TGD~--~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ 727 (1039)
+.+|+||-|-|...++.+..++ |+.+.+--..= .+.++.+++.+||+. .. ....=.+.
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDP-l~------------------~anEG~lv 279 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDP-LE------------------LANEGKLV 279 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCH-HH------------------hhcCceEE
Confidence 7789999999999998877654 66665544332 577899999999975 11 12222366
Q ss_pred EecChhhHHHHHHHHhhcCC-CEEEEEc
Q 001638 728 ARSSPTDKYILVTQLRNVFK-EVVAVTG 754 (1039)
Q Consensus 728 ar~sP~~K~~~V~~l~~~~g-~~V~~~G 754 (1039)
+-+.|++-.+.++.|++. + ...+.+|
T Consensus 280 ~~V~~~~a~~~l~~L~~~-~~~~A~iIG 306 (339)
T COG0309 280 IAVPPEHAEEVLEALRSH-GLKDAAIIG 306 (339)
T ss_pred EEECHHHHHHHHHHHHhc-CCccceeEE
Confidence 778888888889999988 6 4455555
No 258
>PF10579 Rapsyn_N: Rapsyn N-terminal myristoylation and linker region; InterPro: IPR019568 Neuromuscular junction formation relies upon the clustering of acetylcholine receptors and other proteins in the muscle membrane. Rapsyn is a peripheral membrane protein that is selectively concentrated at the neuromuscular junction and is essential for the formation of synaptic acetylcholine receptor aggregates. Acetylcholine receptors fail to aggregate beneath nerve terminals in mice where rapsyn has been knocked out. The N-terminal six amino acids of rapsyn are its myristoylation site, and myristoylation is necessary for the targeting of the protein to the membrane []. ; GO: 0008270 zinc ion binding, 0033130 acetylcholine receptor binding, 0007268 synaptic transmission, 0005856 cytoskeleton, 0030054 cell junction, 0045211 postsynaptic membrane
Probab=21.75 E-value=2.7e+02 Score=24.85 Aligned_cols=36 Identities=25% Similarity=0.561 Sum_probs=25.8
Q ss_pred CCCCCHHHHHhhHHHhhhhcCccccchhhHHhhhHH
Q 001638 13 PKRPSEEALMRWRSAVRVVKNPRRRFRMVADLAKRA 48 (1039)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (1039)
.+|-..+++++|++|..-..++.-||+-..-|....
T Consensus 18 ~~~~~~~Al~~W~~aL~k~~~~~~rf~~lG~l~qA~ 53 (80)
T PF10579_consen 18 HQNETQQALQKWRKALEKITDREDRFRVLGYLIQAH 53 (80)
T ss_pred ccchHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Confidence 346678899999999876667777888555554433
No 259
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.22 E-value=4e+02 Score=29.71 Aligned_cols=63 Identities=21% Similarity=0.276 Sum_probs=35.3
Q ss_pred EEecChhhHHHHHHHHhh-cCCCEEEEEcCCcc-CHH---Hhhh--CCcceeecCCCcH-H--HHhccCEEeecC
Q 001638 727 MARSSPTDKYILVTQLRN-VFKEVVAVTGNGTN-DAP---ALHE--ADIGLAMGIAGTE-V--AKENADVIIMDD 791 (1039)
Q Consensus 727 ~ar~sP~~K~~~V~~l~~-~~g~~V~~~GDG~N-D~~---aL~~--AdVGIamgi~gt~-~--ak~~aDivl~dd 791 (1039)
|.-|||.-=.++++..+- ..|..|.++|.|.. --| +|.. |.|-++- +-|. . .-..||+++.--
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~h--s~T~~l~~~~~~ADIvV~Av 208 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICH--IFTKDLKAHTKKADIVIVGV 208 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC--CCCcCHHHHHhhCCEEEEec
Confidence 455677665566555432 12788999999833 222 4543 4454443 2332 2 345689988643
No 260
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=21.22 E-value=1.2e+02 Score=35.85 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=79.0
Q ss_pred CccHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHH
Q 001638 659 RPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYIL 738 (1039)
Q Consensus 659 R~~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 738 (1039)
|.+..+.++++.+.|..++|+|-| ...+..+|.++.+..++..+..|..-+-+.++.+.+........ ...|......
T Consensus 175 ~~~l~~lL~~l~~~g~TIIivsHd-l~~~~~~adrii~l~~G~iv~~G~~~ev~~~~~l~~~~~~~~~v-~~~~~~~~~~ 252 (402)
T PRK09536 175 QVRTLELVRRLVDDGKTAVAAIHD-LDLAARYCDELVLLADGRVRAAGPPADVLTADTLRAAFDARTAV-GTDPATGAPT 252 (402)
T ss_pred HHHHHHHHHHHHhcCCEEEEEECC-HHHHHHhCCEEEEEECCEEEEecCHHHHhCcHHHHHHhCCceEE-EecCCCCceE
Confidence 567788888888778877777765 66677778888777766666666533333334454544321110 0111110000
Q ss_pred ------HHHHhhcCCCEEEEEcCCccCHH---HhhhCCcceeecCCC-----cHHHHhccCEEeecCCchHHHH
Q 001638 739 ------VTQLRNVFKEVVAVTGNGTNDAP---ALHEADIGLAMGIAG-----TEVAKENADVIIMDDNFTTIVT 798 (1039)
Q Consensus 739 ------V~~l~~~~g~~V~~~GDG~ND~~---aL~~AdVGIamgi~g-----t~~ak~~aDivl~dd~f~~i~~ 798 (1039)
+.......+..+-++|.|.+-.+ .|.+.+++++.|+-. .+.|+.-+--++...-|+.|-.
T Consensus 253 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~L~~~g~~v~~g~l~~~d~d~~~a~~l~~~~~~~~pf~~i~~ 326 (402)
T PRK09536 253 VTPLPDPDRTEAAADTRVHVVGGGQPAARAVSRLVAAGASVSVGPVPEGDTAAETAARVGCEAVTVPPFKPIED 326 (402)
T ss_pred EeecccccccccCCCceEEEECCCCcHHHHHHHHHHCCCeEEEecCcCcchhHHHHHHcCCCEEeeCCCCCCCH
Confidence 00111111355777788777555 678899999988522 2346665555666667887754
No 261
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=21.08 E-value=1.3e+02 Score=27.07 Aligned_cols=8 Identities=50% Similarity=0.472 Sum_probs=3.0
Q ss_pred cccCcEEE
Q 001638 253 LVVGDIVH 260 (1039)
Q Consensus 253 LvvGDIV~ 260 (1039)
|+|||-|.
T Consensus 38 L~~Gd~Vv 45 (84)
T TIGR00739 38 LKKGDKVL 45 (84)
T ss_pred CCCCCEEE
Confidence 33333333
No 262
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=21.05 E-value=7.5e+02 Score=30.40 Aligned_cols=70 Identities=17% Similarity=0.130 Sum_probs=51.9
Q ss_pred cHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhcccceEEEecChhhHHHHH
Q 001638 661 GVREAVETCLAAGITVRMVTGDN-IHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILV 739 (1039)
Q Consensus 661 ~v~~aI~~l~~aGi~v~m~TGD~-~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~V 739 (1039)
|+-.++..+++.+-++.+++=.+ ...++.++.-+|+.- ..+.-.++++=...|
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i--------------------------~~~~~~~~~e~~~~v 148 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI--------------------------EQRSYVTEEDARGQI 148 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce--------------------------EEEEecCHHHHHHHH
Confidence 56778888888888888887766 345566777777643 377788999999999
Q ss_pred HHHhhcCCCEEEEEcCCcc
Q 001638 740 TQLRNVFKEVVAVTGNGTN 758 (1039)
Q Consensus 740 ~~l~~~~g~~V~~~GDG~N 758 (1039)
+.+++. |..| ++||++-
T Consensus 149 ~~lk~~-G~~~-vvG~~~~ 165 (538)
T PRK15424 149 NELKAN-GIEA-VVGAGLI 165 (538)
T ss_pred HHHHHC-CCCE-EEcCchH
Confidence 999998 7654 5598743
No 263
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.36 E-value=2.5e+02 Score=26.64 Aligned_cols=108 Identities=15% Similarity=0.095 Sum_probs=58.1
Q ss_pred cHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCCCCceeeCcccccCCHHHHHhhc-ccceEEEec--ChhhHHH
Q 001638 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELI-PKLQVMARS--SPTDKYI 737 (1039)
Q Consensus 661 ~v~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~GI~~~~~~vi~G~~~~~~~~~~~~~~~-~~~~v~ar~--sP~~K~~ 737 (1039)
+..++++.+.+++.-...-+|.....|...+..+.........+.+.+... ......- ..+.++.-. .+.+-.+
T Consensus 2 ~i~~~~~~i~~~~~i~i~g~g~s~~~a~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~iS~~g~~~~~~~ 78 (139)
T cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQL---MSAANLTPGDVVIAISFSGETKETVE 78 (139)
T ss_pred HHHHHHHHHHhCCEEEEEEcCchHHHHHHHHHHHHHcCCceEEecCHHHHH---HHHHcCCCCCEEEEEeCCCCCHHHHH
Confidence 356788888999876777778778888877777654332222222211110 0011111 222232222 2344566
Q ss_pred HHHHHhhcCCCEEEEEcCCccCHHHhhhCCcceeec
Q 001638 738 LVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMG 773 (1039)
Q Consensus 738 ~V~~l~~~~g~~V~~~GDG~ND~~aL~~AdVGIamg 773 (1039)
+++.++++..+++++|++.. .+.-+.+|.-+-..
T Consensus 79 ~~~~a~~~g~~iv~iT~~~~--~~l~~~~d~~i~~~ 112 (139)
T cd05013 79 AAEIAKERGAKVIAITDSAN--SPLAKLADIVLLVS 112 (139)
T ss_pred HHHHHHHcCCeEEEEcCCCC--ChhHHhcCEEEEcC
Confidence 77888887345666666543 34445677776554
No 264
>PRK11507 ribosome-associated protein; Provisional
Probab=20.29 E-value=1.1e+02 Score=26.52 Aligned_cols=26 Identities=27% Similarity=0.298 Sum_probs=21.6
Q ss_pred EEEeCCeEEEEEcCCcccCcEEEEcC
Q 001638 238 QVTRDGYRKKLSIYDLVVGDIVHLSI 263 (1039)
Q Consensus 238 ~ViR~G~~~~I~~~dLvvGDIV~l~~ 263 (1039)
.|..||+...-.-..|.+||+|.+.-
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 45568998888889999999999854
No 265
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=20.19 E-value=2.3e+02 Score=24.38 Aligned_cols=32 Identities=31% Similarity=0.401 Sum_probs=24.4
Q ss_pred CceEEEEeCCeEEEEEc---CCcccCcEEEEcCCC
Q 001638 234 NLIVQVTRDGYRKKLSI---YDLVVGDIVHLSIGD 265 (1039)
Q Consensus 234 ~~~v~ViR~G~~~~I~~---~dLvvGDIV~l~~Gd 265 (1039)
...+.|-.+|..++|+. .++.|||-|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 44677888999999975 468899999999984
Done!