Query 001638
Match_columns 1039
No_of_seqs 438 out of 3439
Neff 7.7
Searched_HMMs 29240
Date Tue Mar 26 17:16:18 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001638.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_934-937//hhsearch_pdb/001638hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 1.0 1 1 1227.7 93.7 873 118-1015 56-1022(1034)
2 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 1216.9 83.6 871 118-1014 51-1015(1028)
3 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 1198.2 88.0 883 118-1014 8-990 (995)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 1100.5 61.5 829 95-1018 41-883 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 1068.1 -13.3 814 119-1015 18-843 (885)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 723.5 49.8 543 194-860 184-731 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 696.5 50.1 532 196-861 172-712 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 691.3 46.6 532 196-861 94-634 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 251.0 0.0 260 423-813 4-263 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 205.7 25.6 278 423-811 8-287 (287)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=1227.72 Aligned_cols=873 Identities=27% Similarity=0.412 Sum_probs=734.4
Q ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCC-
Q ss_conf 898899988189989999999999997212998568899981999999998567999999999997641577---7788-
Q 001638 118 GGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIP---TEGW- 193 (1039)
Q Consensus 118 ggv~g~~~~l~t~~~~Gl~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~i~a~isl~~~~~---~~~~- 193 (1039)
..++++++.|+|++..||+++|+++|++.||+|++++++.+++|..++++|.++..++|+++++++++.+.. ..++
T Consensus 56 ~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~ 135 (1034)
T 3ixz_A 56 LSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLT 135 (1034)
T ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999859791219799999999985099989998999889999999847389999999999999998740347776
Q ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCCC
Q ss_conf -98643136789999999999999999999999997310---39945999969969998737754483999758980011
Q 001638 194 -PDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKE---KKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPA 269 (1039)
Q Consensus 194 -~~~~~~~~~i~~~illv~~vta~~~~~~~~~~~~l~~~---~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 269 (1039)
...|++++.+ +++++++++..+.|+.+.++..+. ..+..++|+|||++++|+++||||||||.|++||+|||
T Consensus 136 ~~~~~~~~~~i----~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPA 211 (1034)
T 3ixz_A 136 TDDNLYLALAL----IAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPA 211 (1034)
T ss_pred CCCCHHHHHHH----HEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEECC
T ss_conf 54420564243----01322799999999999999999976248973599999989998889879885899857964358
Q ss_pred CEEEEEECCEEEECCCCCCCCCCCCCCCC---------CCEEECCCEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCC
Q ss_conf 18999507326866677789974224899---------961221517852875899988413114678988730589888
Q 001638 270 DGILISGYSLTIDESSLSGETEPVHINRD---------RPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDE 340 (1039)
Q Consensus 270 Dgiii~g~~l~VDES~LTGEs~pv~k~~~---------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 340 (1039)
||++++|+++.||||+|||||.|+.|..+ .+.+|+||.+.+|.++++|++||.+|++|++..++.+.+.++
T Consensus 212 D~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~ 291 (1034)
T 3ixz_A 212 DIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEK 291 (1034)
T ss_pred CEEEEEECCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEECCEEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCCCC
T ss_conf 76999708805883366788777665577766563234451220406986042499996025437408998620356678
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 80378786799999999999999999999999999843002455542034678999999999988865047514999999
Q 001638 341 TPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLS 420 (1039)
Q Consensus 341 tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aitilvvaiP~~Lplavtl~ 420 (1039)
+|+|+++++++..+..+++++++++|+++... ...+...+..++++++++||||||+++|++
T Consensus 292 tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~ 353 (1034)
T 3ixz_A 292 TPIAIEIEHFVDIIAGLAILFGATFFIVAMCI------------------GYTFLRAMVFFMAIVVAYVPEGLLATVTVC 353 (1034)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------CCHHHHHHHHHHHHHHHEECCCCHHHHHHH
T ss_conf 91899999999999999999999999999996------------------412999999999998820266508999999
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99999996012111256601110366069993476744349439999997374211146996345588898899999999
Q 001638 421 LAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQ 500 (1039)
Q Consensus 421 la~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 500 (1039)
+++++++|.+++++||+++++|+||++++||||||||||+|+|+|.++|..+..+......................+..
T Consensus 354 la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 433 (1034)
T 3ixz_A 354 LSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCR 433 (1034)
T ss_pred HHHHHHHHHHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999987338828647678886158729972897872368379999997795122567666566556767789999999
Q ss_pred HHHHCCCCCEEECCCC----CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCC--CCEE
Q ss_conf 9985159724333899----711048901899999999939994101235607898348999970289997489--9807
Q 001638 501 SIFQNTGSEVVKDKDG----RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPN--NGGF 574 (1039)
Q Consensus 501 ~i~~n~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~--~~~~ 574 (1039)
.+..|+.+....+.+. .....|+|+|.|++.++...+.+....+..+++++.+||+|+||||++++...+ ++++
T Consensus 434 ~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~ 513 (1034)
T 3ixz_A 434 VLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRH 513 (1034)
T ss_pred HHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCE
T ss_conf 98871626653576777665743554925999999999857886888974860699503577726899998337888608
Q ss_pred EEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC---------CCCCCCCC
Q ss_conf 999918478999532331215994013999999999999999947037177899975689987---------67888889
Q 001638 575 RVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHK---------AESIPENN 645 (1039)
Q Consensus 575 ~~~~KGa~e~Il~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~---------~~~~~e~~ 645 (1039)
.+|+|||||.|+++|+++.. +|...|++++.++.+.+.+++|+.+|+|++++|||+++..+. ..+..|+|
T Consensus 514 ~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~ 592 (1034)
T 3ixz_A 514 VLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSG 592 (1034)
T ss_pred EEEEECCHHHHHHHHHHHHC-CCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCCCHHHHHCCCCC
T ss_conf 99996884999997377552-89640199999999999999987147582368678558000432112453443022248
Q ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC------------------------C
Q ss_conf 2762230135999911799999999789979998789999999999991997799------------------------7
Q 001638 646 YTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG------------------------G 701 (1039)
Q Consensus 646 l~llG~i~i~D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~------------------------~ 701 (1039)
++|+|+++++||+||+++++|+.|+++||+++|+|||+..||+++|++|||..++ .
T Consensus 593 l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 672 (1034)
T 3ixz_A 593 LSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARA 672 (1034)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCE
T ss_conf 67988871368870659999999998699699996997799999999869998872478888876176500025445431
Q ss_pred CEEECCCCCCCCHHHHHHHCCCC--EEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHH
Q ss_conf 11317322348988998432651--4999629411999999985208989999939956988762089235306887288
Q 001638 702 LAIEGTDFRSKNPQEMQELIPKL--QVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEV 779 (1039)
Q Consensus 702 ~vi~g~~~~~~~~~~~~~~~~~~--~V~ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~v 779 (1039)
.+++|.++..+.++++.+.+.+. .+|+|++|++|..+|+.+|+. |++|+|+|||.||+|||++||+|||||++|+++
T Consensus 673 ~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~ 751 (1034)
T 3ixz_A 673 CVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDA 751 (1034)
T ss_pred EEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHCCEEEEECCCCCHH
T ss_conf 6771676663899999999873782699966989999999999976-999999879577699999789329807756799
Q ss_pred HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88414888604990389999999689989899999999999999999999999970999557999999997766897857
Q 001638 780 AKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALA 859 (1039)
Q Consensus 780 ak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~vqllwinli~d~l~ala 859 (1039)
+|++||+++.++++.+|+.++++||++|+||+|+++|++++|+..++..+++.++..+.||+++|+||+|+++|++|+++
T Consensus 752 aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~pala 831 (1034)
T 3ixz_A 752 AKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVS 831 (1034)
T ss_pred HHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99854999666883399999999889999999999999999999999999999982146689999999999988888888
Q ss_pred HCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHCC--------CCCCCCC-------CC----
Q ss_conf 056999866547899998-8776417879999998-9999999999977100--------0114689-------98----
Q 001638 860 LATEPPHEGLMQRPPIGR-NVHFITVTMWRNIIGQ-SIYQIIVLGVLTFCGK--------KILKLSG-------PN---- 918 (1039)
Q Consensus 860 La~e~p~~~lm~r~P~~~-~~~li~~~m~~~i~~~-~i~q~~v~~~l~~~~~--------~~~~~~~-------~~---- 918 (1039)
|++|||++++|+|||+++ +++++++.++..++.+ ++++.+..++.+|... .+++... .+
T Consensus 832 l~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1034)
T 3ixz_A 832 LAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDS 911 (1034)
T ss_pred HHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 51688973266479989753445578899999999999999999999999996367762000011122233444431011
Q ss_pred ------------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHC
Q ss_conf ------------3220247899999999999997751465433212-4513499999999999999998--724323013
Q 001638 919 ------------ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFR-GIFSSWVFIAVLVATVGFQVII--VELLGTFAT 983 (1039)
Q Consensus 919 ------------~~~~~~t~~f~~~v~~qifn~~n~r~~~~~~~f~-~~~~n~~f~~~~~~~~~~q~~~--v~~~~~~~~ 983 (1039)
.....+|+.|+++|++|+||.+|||+. +.++|+ ++++|+++++.+++.+++|+++ +++++.+|+
T Consensus 912 ~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~-~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~ 990 (1034)
T 3ixz_A 912 YGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTR-RLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFN 990 (1034)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 121110111000002579899999999999999831268-8765426775368999999999999999998266777756
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 55789688999999998889999988560047
Q 001638 984 TVPLNWKLWLASVVIGAISMPFGVLLKCIPVG 1015 (1039)
Q Consensus 984 ~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~~ 1015 (1039)
+.|++|.+|+++++++++.++++++.|++..+
T Consensus 991 ~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~ 1022 (1034)
T 3ixz_A 991 FMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRC 1022 (1034)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78898999999999999999999999999974
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=1216.94 Aligned_cols=871 Identities=26% Similarity=0.383 Sum_probs=730.2
Q ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CC
Q ss_conf 8988999881899899999999999972129985688999819999999985679999999999976415777-----78
Q 001638 118 GGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPT-----EG 192 (1039)
Q Consensus 118 ggv~g~~~~l~t~~~~Gl~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~i~a~isl~~~~~~-----~~ 192 (1039)
..++++++.|+|+..+||+.+|+++|++.||+|+++.++++|+|..++++|.++++++|++++++|++++... ..
T Consensus 51 ~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~ 130 (1028)
T 2zxe_A 51 LSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEP 130 (1028)
T ss_dssp SCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999968694679899999999986699979999999899999999970899999999999999987511345666
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCC
Q ss_conf 898643136789999999999999999999999----9973103994599996996999873775448399975898001
Q 001638 193 WPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQF----KALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVP 268 (1039)
Q Consensus 193 ~~~~~~~~~~i~~~illv~~vta~~~~~~~~~~----~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VP 268 (1039)
+...|++++ +++++++++++.++.|+++. +++.+ ..+..++|+|||++++|+++||||||||.|++||+||
T Consensus 131 ~~~~~~~~~----~i~~vv~i~~~~~~~qe~ka~~~~~~L~~-l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IP 205 (1028)
T 2zxe_A 131 ANDNLYLGV----VLSTVVIVTGCFSYYQEAKSSRIMDSFKN-MVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIP 205 (1028)
T ss_dssp CCHHHHHHH----HHHHHHHHHHHHHHHHTCCCCCHHHHHHT-TSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCC
T ss_pred CCCHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEE
T ss_conf 520079998----98988889999999999999999999885-2787269998999999988897867779989979841
Q ss_pred CCEEEEEECCEEEECCCCCCCCCCCCCCCCC---------CEEECCCEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCC
Q ss_conf 1189995073268666777899742248999---------6122151785287589998841311467898873058988
Q 001638 269 ADGILISGYSLTIDESSLSGETEPVHINRDR---------PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGED 339 (1039)
Q Consensus 269 aDgiii~g~~l~VDES~LTGEs~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 339 (1039)
|||++++|++|.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|++|++++++.+++.+
T Consensus 206 aD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 285 (1028)
T 2zxe_A 206 ADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVG 285 (1028)
T ss_dssp SEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCC
T ss_pred CEEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEECCEEEEEEEEECCCCHHHHHHHHCCCCCCC
T ss_conf 22899960858998675678876344346778888445335487374697016999999845143988999860378878
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 88037878679999999999999999999999999984300245554203467899999999998886504751499999
Q 001638 340 ETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTL 419 (1039)
Q Consensus 340 ~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aitilvvaiP~~Lplavtl 419 (1039)
++|+|+.+++++.++..+++++++++|++.. +.+ . .+...+.+++++++++|||+||+++++
T Consensus 286 ~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~-------~--------~~~~~~~~~i~llv~~iP~~Lp~~vti 347 (1028)
T 2zxe_A 286 RTPIAIEIEHFIHIITGVAVFLGVSFFILSL---ILG-------Y--------SWLEAVIFLIGIIVANVPEGLLATVTV 347 (1028)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTT-------C--------CHHHHHHHHHHHHHHHSCTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCC-------C--------CHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 8928999999999999999999999999999---736-------7--------699999999999999747417999999
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999601211125660111036606999347674434943999999737421114699634558889889999999
Q 001638 420 SLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFL 499 (1039)
Q Consensus 420 ~la~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 499 (1039)
++++++.+|.+++++||+++++|+||++++||||||||||+|+|+|.+++..+..+.....+..........+...+.+.
T Consensus 348 ~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 427 (1028)
T 2zxe_A 348 CLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALS 427 (1028)
T ss_dssp HHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHH
T ss_pred HHHHHHHHHHHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999855891644456766414762995168888887738999999898465136777765544466778999999
Q ss_pred HHHHHCCCCCEEECCCC----CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECC--CCCE
Q ss_conf 99985159724333899----71104890189999999993999410123560789834899997028999748--9980
Q 001638 500 QSIFQNTGSEVVKDKDG----RTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLP--NNGG 573 (1039)
Q Consensus 500 ~~i~~n~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~--~~~~ 573 (1039)
..+++|+++....+... ..+..|+|+|.|+++++...+.+....+..+++++.+||+|+||||+++++.+ ++++
T Consensus 428 ~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~ 507 (1028)
T 2zxe_A 428 RIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESR 507 (1028)
T ss_dssp HHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCC
T ss_pred HHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCC
T ss_conf 99986578765047777766453007894099999999995898889887482678704476666479999405788871
Q ss_pred EEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC---------CCCCCCC
Q ss_conf 7999918478999532331215994013999999999999999947037177899975689987---------6788888
Q 001638 574 FRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHK---------AESIPEN 644 (1039)
Q Consensus 574 ~~~~~KGa~e~Il~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~---------~~~~~e~ 644 (1039)
+.+|+|||||.|+++|+++. .+|...+++++.++.+.+.+++|+++|+|++++|||+++.++. .....|.
T Consensus 508 ~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~ 586 (1028)
T 2zxe_A 508 YLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTT 586 (1028)
T ss_dssp EEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCS
T ss_pred EEEEEECCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHC
T ss_conf 79999388289998745653-38972128889999999999999855997999998746822134201246245555543
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC------------------------
Q ss_conf 92762230135999911799999999789979998789999999999991997799------------------------
Q 001638 645 NYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDG------------------------ 700 (1039)
Q Consensus 645 ~l~llG~i~i~D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~------------------------ 700 (1039)
|++|+|+++++||+||+++++|+.|+++||+++|+|||+..||.++|++|||..++
T Consensus 587 ~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 666 (1028)
T 2zxe_A 587 DLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAK 666 (1028)
T ss_dssp SEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCC
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCC
T ss_conf 80998651157899844899999999869979998899779999999986988788336777776418632221555662
Q ss_pred CCEEECCCCCCCCHHHHHHHCCCCE--EEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCH
Q ss_conf 7113173223489889984326514--99962941199999998520898999993995698876208923530688728
Q 001638 701 GLAIEGTDFRSKNPQEMQELIPKLQ--VMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTE 778 (1039)
Q Consensus 701 ~~vi~g~~~~~~~~~~~~~~~~~~~--V~ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~ 778 (1039)
..+++|.++..+.++++++.+.+.. +|+|++|+||..+|+.+|+. |++|+|+|||.||+|||++||||||||++|++
T Consensus 667 ~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd 745 (1028)
T 2zxe_A 667 ACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGISGSD 745 (1028)
T ss_dssp EEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEESSSCCH
T ss_pred EEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHCCCEEEECCCCCH
T ss_conf 69988088564799999999862796799985888999999999968-99899985885339999868911996776588
Q ss_pred HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 88841488860499038999999968998989999999999999999999999997099955799999999776689785
Q 001638 779 VAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGAL 858 (1039)
Q Consensus 779 vak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~vqllwinli~d~l~al 858 (1039)
+||++||+++++++|.+|+.++++||++|+||+|++.|++++|+..+...+++.++..+.|++++|++|+|+++|.+|++
T Consensus 746 ~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~ 825 (1028)
T 2zxe_A 746 VSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAI 825 (1028)
T ss_dssp HHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHH
T ss_pred HHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 89985489955798779999999999999999999999999999999999999997666445799999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHH-HHHHHHHHHHHHHHHH-----CC---C-------CCCCCCC----
Q ss_conf 705699986654789999887-764178799999-9899999999999771-----00---0-------1146899----
Q 001638 859 ALATEPPHEGLMQRPPIGRNV-HFITVTMWRNII-GQSIYQIIVLGVLTFC-----GK---K-------ILKLSGP---- 917 (1039)
Q Consensus 859 aLa~e~p~~~lm~r~P~~~~~-~li~~~m~~~i~-~~~i~q~~v~~~l~~~-----~~---~-------~~~~~~~---- 917 (1039)
+|++|||++++|+|||+.+++ +++++.++..++ ..++++.++.++.++. +. . ++.....
T Consensus 826 al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 905 (1028)
T 2zxe_A 826 SLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVED 905 (1028)
T ss_dssp HGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEEC
T ss_pred HHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCCCCCCCC
T ss_conf 86028661456515999952134527999999999999999999999999987406766201310220010356542113
Q ss_pred -CC-----------CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--HHHHHHHC
Q ss_conf -83-----------22024789999999999999775146543321245134999999999999999987--24323013
Q 001638 918 -NA-----------TLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIV--ELLGTFAT 983 (1039)
Q Consensus 918 -~~-----------~~~~~t~~f~~~v~~qifn~~n~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~v--~~~~~~~~ 983 (1039)
.. ....+|++|+++|++|+||.+|||+. +.++|+..++|+++++++++.+++|++++ ++++.+|+
T Consensus 906 ~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~ 984 (1028)
T 2zxe_A 906 SFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTR-RNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALR 984 (1028)
T ss_dssp TTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS-SSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 4553222344445666788999999999999999987468-751101577688999999999999999998656776421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 5578968899999999888999998856004
Q 001638 984 TVPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 984 ~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~ 1014 (1039)
+.|++|.+|+++++++++.++++++.|++..
T Consensus 985 ~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r 1015 (1028)
T 2zxe_A 985 MYPLKPSWWFCAFPYSLIIFLYDEMRRFIIR 1015 (1028)
T ss_dssp CCCCCGGGGGTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8889999999999999999999999999987
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=1198.17 Aligned_cols=883 Identities=29% Similarity=0.429 Sum_probs=735.7
Q ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCC
Q ss_conf 898899988189989999999999997212998568899981999999998567999999999997641577778--898
Q 001638 118 GGVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEG--WPD 195 (1039)
Q Consensus 118 ggv~g~~~~l~t~~~~Gl~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~i~a~isl~~~~~~~~--~~~ 195 (1039)
..++++++.|+|+..+||+.+|+++|++.||.|+++.++++++|..++++|+++.+++|++++++|+++++...+ ...
T Consensus 8 ~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~ 87 (995)
T 3ar4_A 8 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETIT 87 (995)
T ss_dssp SCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGS
T ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 89999999858996669899999999975688732898898699999999988999999999999999886025665403
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCE--EEEEECCCCCCCCEEEECCCCCCCCCEEE
Q ss_conf 6431367899999999999999999999999973103994599996996--99987377544839997589800111899
Q 001638 196 GVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGY--RKKLSIYDLVVGDIVHLSIGDQVPADGIL 273 (1039)
Q Consensus 196 ~~~~~~~i~~~illv~~vta~~~~~~~~~~~~l~~~~~~~~v~V~R~G~--~~~I~~~dLvvGDIV~l~~Gd~VPaDgii 273 (1039)
.|++++.+++.+++...++.+.+++.++..+++.+ ..+..++|+|||+ .++|+++||+|||||.|++||+|||||++
T Consensus 88 ~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~-~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~l 166 (995)
T 3ar4_A 88 AFVEPFVILLILIANAIVGVWQERNAENAIEALKE-YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRI 166 (995)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGG-GSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEE
T ss_conf 47876886678899999999999999999999871-08973899937986479978999877878998897843544899
Q ss_pred EEE--CCEEEECCCCCCCCCCCCCCCCC------------CEEECCCEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCC
Q ss_conf 950--73268666777899742248999------------6122151785287589998841311467898873058988
Q 001638 274 ISG--YSLTIDESSLSGETEPVHINRDR------------PFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGED 339 (1039)
Q Consensus 274 i~g--~~l~VDES~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 339 (1039)
+++ .+|.||||+|||||.|+.|..+. +++|+||.+.+|.++++|++||.+|++|++++++.+++.+
T Consensus 167 l~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 246 (995)
T 3ar4_A 167 LSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQD 246 (995)
T ss_dssp EEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCCCC
T ss_pred EEEEECEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCEEECCEEEEEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf 98850439998252468876334004566776667555454676187898445899999767221989999973257878
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 880378786799999999999999999999999999843002-4555420346789999999999888650475149999
Q 001638 340 ETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHH-QIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVT 418 (1039)
Q Consensus 340 ~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aitilvvaiP~~Lplavt 418 (1039)
++|+|+++++++.++.++.+.+++++++++...+ ... ....| ...+...|..++++++++|||+||+++|
T Consensus 247 ~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~~~~~~~~ai~l~v~aiP~~Lp~~vt 317 (995)
T 3ar4_A 247 KTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF-----NDPVHGGSW----IRGAIYYFKIAVALAVAAIPEGLPAVIT 317 (995)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG-----GSCSSSSCH----HHHHHHHHHHHHHHHHHHSCTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCCCHH----HHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 9938999999999999999999999999999874-----143346407----9999999999999999866760489999
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCC---------CCCC---CCCCCC
Q ss_conf 9999999996012111256601110366069993476744349439999997374211---------1469---963455
Q 001638 419 LSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKT---------IKSG---DNEKLL 486 (1039)
Q Consensus 419 l~la~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~---------~~~~---~~~~~~ 486 (1039)
+++++++.+|++++++||+++++|+||++++||||||||||+|+|+|.+++..+..+. .+.. +.....
T Consensus 318 ~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 397 (995)
T 3ar4_A 318 TCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVL 397 (995)
T ss_dssp HHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEE
T ss_pred HHHHHHHHHHCCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCC
T ss_conf 99999999844178486134155550383399765888766585699999834755676554302540477768863101
Q ss_pred -----CCCCCHHHHHHHHHHHHHCCCCCEEEC-CCCCCCCCCCCHHHHHHHHHHHHCC-CC--C-------------CCC
Q ss_conf -----888988999999999985159724333-8997110489018999999999399-94--1-------------012
Q 001638 487 -----KPSVSDAVFNIFLQSIFQNTGSEVVKD-KDGRTNILGTPTERAILEFGLILGG-DS--T-------------FHR 544 (1039)
Q Consensus 487 -----~~~~~~~~~~~l~~~i~~n~~~~~~~~-~~~~~~~~g~p~e~All~~a~~~g~-~~--~-------------~~~ 544 (1039)
......+....+....+.|+++.+..+ .++..+..|+|+|.|++.++.+.|. +. . ..+
T Consensus 398 ~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~ 477 (995)
T 3ar4_A 398 KNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIR 477 (995)
T ss_dssp ETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 36643444455899999999987488805656889832554796479999999983996410001342010121015566
Q ss_pred CCCCEEEEECCCCCCCCEEEEEECCCCC-----EEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH--
Q ss_conf 3560789834899997028999748998-----079999184789995323312159940139999999999999999--
Q 001638 545 EESAIVKVEPFNSVKKRMSVLVSLPNNG-----GFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGF-- 617 (1039)
Q Consensus 545 ~~~~il~~~pF~s~~krmsviv~~~~~~-----~~~~~~KGa~e~Il~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~-- 617 (1039)
..+++++.+||+|+|||||++++.++ + ++.+|+|||+|.|+++|+++..+ +...|++++.++.+.+.+++|
T Consensus 478 ~~~~~~~~~pF~s~rk~msvi~~~~~-g~~~~~~~~~~~KGa~e~il~~c~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 555 (995)
T 3ar4_A 478 QLMKKEFTLEFSRDRKSMSVYCSPAK-SSRAAVGNKMFVKGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKILSVIKEWGT 555 (995)
T ss_dssp HHEEEEEEEEEETTTTEEEEEEEESS-CCSCSCCCEEEEEECHHHHHHTEEEEEET-TEEEECCHHHHHHHHHHHHHHHH
T ss_pred HHCCEEEEEECCCCCCEEEEEEECCC-CCCCCCCEEEEECCCHHHHHHHCCHHHCC-CCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 41745777404888875699983489-87666444999758879999854054428-97324999999999999998776
Q ss_pred HHCCCCEEEEEEEECCCCCCC--------CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHH
Q ss_conf 470371778999756899876--------788888927622301359999117999999997899799987899999999
Q 001638 618 SSEALRTLCLAFQDIKGNHKA--------ESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKA 689 (1039)
Q Consensus 618 a~~glr~l~lAyk~i~~~~~~--------~~~~e~~l~llG~i~i~D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~a 689 (1039)
+.+|+|++++|||+++..+.. ....|+|++|+|+++++||+||+++++|+.|+++||+++|+|||+..||++
T Consensus 556 a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ 635 (995)
T 3ar4_A 556 GRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIA 635 (995)
T ss_dssp STTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHH
T ss_pred HHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 30561488999983476511122234024455306948999985258896669999999998699899989997899999
Q ss_pred HHHHCCCCCCC----CCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
Q ss_conf 99991997799----71131732234898899843265149996294119999999852089899999399569887620
Q 001638 690 IAKECGILTDG----GLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHE 765 (1039)
Q Consensus 690 iA~~~GI~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~ 765 (1039)
+|++|||.... +.+++|.++..+.++++.+.+.+..+|+|++|+||..+|+.+|++ |++|+|+|||.||+|||++
T Consensus 636 ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~alk~ 714 (995)
T 3ar4_A 636 ICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKK 714 (995)
T ss_dssp HHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHHHH
T ss_pred HHHHCCCCCCCCCCCCEEEECHHHHHCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHH
T ss_conf 999839677887535348983664628999999987537389970899999999999977-9979998388144999987
Q ss_pred CCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 89235306887288884148886049903899999996899898999999999999999999999999709995579999
Q 001638 766 ADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQL 845 (1039)
Q Consensus 766 AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~vql 845 (1039)
||+||||| +|+++|+++||+++++|+|.+|+.++++||++|+||+|+++|++++|+..++..+++.++..+.|++++|+
T Consensus 715 Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qi 793 (995)
T 3ar4_A 715 AEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQL 793 (995)
T ss_dssp STEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHH
T ss_pred CCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 89679967-88999997388997778778999999998999999999999999999999999999999847625789999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH--HHHC--CC-----CCCC--
Q ss_conf 99997766897857056999866547899998877641787999999899999999999--7710--00-----1146--
Q 001638 846 LWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVL--TFCG--KK-----ILKL-- 914 (1039)
Q Consensus 846 lwinli~d~l~alaLa~e~p~~~lm~r~P~~~~~~li~~~m~~~i~~~~i~q~~v~~~l--~~~~--~~-----~~~~-- 914 (1039)
||+|+++|++|+++|++|||++++|+|||+.++++++++.++..++.+++|+.++.+.. ++.. .. +...
T Consensus 794 l~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (995)
T 3ar4_A 794 LWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTH 873 (995)
T ss_dssp HHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGG
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC
T ss_conf 99999998877776306777756873799997645448999999999999999999999999998515665433000001
Q ss_pred ----CC--CC---------CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--HHH
Q ss_conf ----89--98---------32202478999999999999977514654332124513499999999999999998--724
Q 001638 915 ----SG--PN---------ATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVII--VEL 977 (1039)
Q Consensus 915 ----~~--~~---------~~~~~~t~~f~~~v~~qifn~~n~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~--v~~ 977 (1039)
++ .. .....+|++|+++|++|+||.+|||+.+...++.++++|+++++++++.+++|+++ +++
T Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~ 953 (995)
T 3ar4_A 874 FMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDP 953 (995)
T ss_dssp CSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 12234443333433221001013565999999999999999860255431005775479999999999999999998887
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 3230135578968899999999888999998856004
Q 001638 978 LGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPV 1014 (1039)
Q Consensus 978 ~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~ 1014 (1039)
++.+|++.|+++.+|+++++++++.++++++.|++..
T Consensus 954 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r 990 (995)
T 3ar4_A 954 LPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIAR 990 (995)
T ss_dssp HHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7776115789999999999999999999999999941
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=1100.45 Aligned_cols=829 Identities=21% Similarity=0.319 Sum_probs=667.5
Q ss_pred CCCCHHHHHHHHCCCCHHHH---H---HHCCHHH-HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 55597689866313995689---9---7089889-998818998999999999999721299856889998199999999
Q 001638 95 YGIEPDELESIVRSHNSKAV---E---SRGGVEG-LAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEA 167 (1039)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~l---~---~~ggv~g-~~~~l~t~~~~Gl~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~ 167 (1039)
.+.+.++|.+..+.++.+.. + ..+++++ ++..|+++...||+.+|+++|++.||+|+++.++ +++|..++++
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~-~~~~~~~l~~ 119 (920)
T 1mhs_A 41 EDEDIDALIEDLESHDGHDAEEEEEEATPGGGRVVPEDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEK-ENHFLKFLGF 119 (920)
T ss_dssp CHHHHHHHHHHHSSCCCCCCSSSCCCSHHHHHSCCSSTTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCC-CSSHHHHTHH
T ss_pred HHCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHH
T ss_conf 013899998887520356643204554037620368998589957999999999999963998158888-8899999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEE
Q ss_conf 85679999999999976415777788986431367899999999999999999999999973103994599996996999
Q 001638 168 LHDLTLIILMICAAVSIGVGIPTEGWPDGVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKK 247 (1039)
Q Consensus 168 ~~~~~~~il~i~a~isl~~~~~~~~~~~~~~~~~~i~~~illv~~vta~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~ 247 (1039)
|+++..++|.++++++++++ .|.+++.+++.+++..+++.+.+++.++..+++.+ ..+..++|+|||++++
T Consensus 120 f~~~~~~ll~~aai~s~~~g--------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~-l~~~~a~V~RdG~~~~ 190 (920)
T 1mhs_A 120 FVGPIQFVMEGAAVLAAGLE--------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKK-TLALKAVVLRDGTLKE 190 (920)
T ss_dssp HHHHHHHHHHHHHHHCTTCS--------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-CCCSSCEEECSSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCEEEE
T ss_conf 98799999999999999997--------68999999999999999999999999999998633-5998799998998999
Q ss_pred EECCCCCCCCEEEECCCCCCCCCEEEEEECC-EEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEEEEEECCCHHH
Q ss_conf 8737754483999758980011189995073-268666777899742248999612215178528758999884131146
Q 001638 248 LSIYDLVVGDIVHLSIGDQVPADGILISGYS-LTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEW 326 (1039)
Q Consensus 248 I~~~dLvvGDIV~l~~Gd~VPaDgiii~g~~-l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~ 326 (1039)
|++++|||||+|.|++||+|||||++++|++ +.||||+|||||.|+.|..++ .+|+||.+.+|.++++|++||.+|++
T Consensus 191 I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~ 269 (920)
T 1mhs_A 191 IEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFV 269 (920)
T ss_dssp CCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCST
T ss_pred EEHHHCCCCCEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEECCCC-EEECCCEEECCEEEEEEEEECCCCHH
T ss_conf 89899588978996779733665699945722320222247888646934798-63037669513599999995776788
Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78988730589888803787867999999999999999999999999998430024555420346789999999999888
Q 001638 327 GRLMVTLSEGGEDETPLQVKLNGVATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVV 406 (1039)
Q Consensus 327 g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aitilv 406 (1039)
|++.+++.+++.+++|+|+.+++++.++..+.+++++++|+.+ + + ....+...|..++++++
T Consensus 270 g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~---~------------~---~~~~~~~~l~~av~llV 331 (920)
T 1mhs_A 270 GRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSS---F------------Y---RSNPIVQILEFTLAITI 331 (920)
T ss_dssp TTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT---T------------T---TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H------------H---CCCCHHHHHHHHHHHHH
T ss_conf 8998877642467764999999999999999999999999998---8------------4---68869999999999998
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 65047514999999999999960121112566011103660699934767443494399999973742111469963455
Q 001638 407 VAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLL 486 (1039)
Q Consensus 407 vaiP~~Lplavtl~la~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 486 (1039)
++|||+||+++|++++.++.+|.++|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. +
T Consensus 332 ~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~------~----- 400 (920)
T 1mhs_A 332 IGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV------D----- 400 (920)
T ss_dssp HHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC------C-----
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCC------C-----
T ss_conf 76760377778999999999998688387057135554367689977888755553169998506998------9-----
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEE
Q ss_conf 88898899999999998515972433389971104890189999999993999410123560789834899997028999
Q 001638 487 KPSVSDAVFNIFLQSIFQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLV 566 (1039)
Q Consensus 487 ~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv 566 (1039)
+++ ++ ...+.|+... . ..+||+|.|+++++.+.+. .......+++++.+||+|.+|+|++++
T Consensus 401 ----~~~---ll-~~a~l~~~~~----~-----~~~~P~e~Al~~~~~~~~~-~~~~~~~~~~~~~~pF~s~~k~ms~iv 462 (920)
T 1mhs_A 401 ----PED---LM-LTACLAASRK----K-----KGIDAIDKAFLKSLKYYPR-AKSVLSKYKVLQFHPFDPVSKKVVAVV 462 (920)
T ss_dssp ----CTH---HH-HHHHHSCCCS----S-----CSCCSHHHHHHHHHHHSSS-CCGGGSCCCEEEEEEEETTTTEEEEEE
T ss_pred ----HHH---HH-HHHHHHCCCC----C-----CCCCHHHHHHHHHHHHCCC-CHHHCCCCCEEEEEECCCCCCEEEEEE
T ss_conf ----899---99-9999854776----6-----6898589999999996463-101013553357861167788599999
Q ss_pred ECCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 74899807999918478999532331215994013999999999999999947037177899975689987678888892
Q 001638 567 SLPNNGGFRVFCKGASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNY 646 (1039)
Q Consensus 567 ~~~~~~~~~~~~KGa~e~Il~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l 646 (1039)
+.++ ++...++|||||.++++|+. ..+++++.++.+.+.+++|+.+|+|++++||+. .|.++
T Consensus 463 ~~~~-g~~~~~~KGape~il~~c~~-------~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~----------~e~~l 524 (920)
T 1mhs_A 463 ESPQ-GERITCVKGAPLFVLKTVEE-------DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR----------GEGSW 524 (920)
T ss_dssp CCSS-SSCEEEEEECHHHHHHHCCC-------SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS----------SSCSC
T ss_pred EECC-CCEEEEEECCHHHHHHHCCC-------CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEC----------CCCCC
T ss_conf 9679-91899990879999986135-------678987889989999999986799799999832----------66530
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC----CCCCEEECCCCCCCCHHHHHHHCC
Q ss_conf 7622301359999117999999997899799987899999999999919977----997113173223489889984326
Q 001638 647 TLIAVVGIKDPVRPGVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILT----DGGLAIEGTDFRSKNPQEMQELIP 722 (1039)
Q Consensus 647 ~llG~i~i~D~lr~~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~----~~~~vi~g~~~~~~~~~~~~~~~~ 722 (1039)
+|+|+++++||+||+++++|+.|+++||+++|+||||..||++||+++||.. ....+++|. ..++++++.+.+.
T Consensus 525 ~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~ 602 (920)
T 1mhs_A 525 EILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVE 602 (920)
T ss_dssp CCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTT
T ss_pred EEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCC--CCCCHHHHHHHHH
T ss_conf 78899997343210179999998625744999838978999999998499965467541242276--5589899998775
Q ss_pred CCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHH
Q ss_conf 51499962941199999998520898999993995698876208923530688728888414888604990389999999
Q 001638 723 KLQVMARSSPTDKYILVTQLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARW 802 (1039)
Q Consensus 723 ~~~V~ar~sP~~K~~lV~~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~ 802 (1039)
+..||+|++|+||..+|+.+|++ |++|+|+|||.||+|||++|||||||| +|+++||++||+++++|+|++|+.++++
T Consensus 603 ~~~V~arv~P~~K~~iV~~Lq~~-g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~ 680 (920)
T 1mhs_A 603 AADGFAEVFPQHKYNVVEILQQR-GYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKT 680 (920)
T ss_dssp TTSCEESCCSTHHHHHHHHHHTT-TCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHH
T ss_pred HCEEEEEECHHHHHHHHHHHHHC-CCEEEEECCCCCCHHHHHHCCCCCCCC-CCCHHHHHHCCEEECCCCHHHHHHHHHH
T ss_conf 18199983799999999999967-996999828810099998578674056-4339999846807767977789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68998989999999999999999999999997099955799999999776689785705699986654789999887764
Q 001638 803 GRSVYINIQKFVQFQLTVNIVALVINFVAACITGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFI 882 (1039)
Q Consensus 803 gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~~~~~pl~~vqllwinli~d~l~alaLa~e~p~~~lm~r~P~~~~~~li 882 (1039)
||++|+||+|+++|+++.|+....+.++...+.+. |+++.|++|+|+++|. |+++|++|+++.+ ++|+.++.+-
T Consensus 681 gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~-~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~~- 754 (920)
T 1mhs_A 681 SRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNR-SLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLPK- 754 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC-CCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHH-HHHHHCCCCCCCC---CCCCCCHHHH-
T ss_conf 99999999998788979999999999999999961-6879999999999877-7665135676434---5887840898-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 17879999998999999999997710001146899--8322024789999999999999775146543321245134999
Q 001638 883 TVTMWRNIIGQSIYQIIVLGVLTFCGKKILKLSGP--NATLILNTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVF 960 (1039)
Q Consensus 883 ~~~m~~~i~~~~i~q~~v~~~l~~~~~~~~~~~~~--~~~~~~~t~~f~~~v~~qifn~~n~r~~~~~~~f~~~~~n~~f 960 (1039)
+|..++.++++..+..++.++.... .+..+. ......+|+.|++++++|+||.+++|+.+. +|++. .|+++
T Consensus 755 ---~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~--~~~~~-~~~~~ 827 (920)
T 1mhs_A 755 ---LWGMSVLLGVVLAVGTWITVTTMYA-QGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGP--FWSSI-PSWQL 827 (920)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHHHHHTT-TTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSS--CSCCS-CTHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHCCC-HHHHH
T ss_conf ---9999999999999999999999998-35456533206678999999999999999998503605--40375-59999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9999999999999872432301355789688999999998889999988560047766
Q 001638 961 IAVLVATVGFQVIIVELLGTFATTVPLNWKLWLASVVIGAISMPFGVLLKCIPVGTCT 1018 (1039)
Q Consensus 961 ~~~~~~~~~~q~~~v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~~~~~ 1018 (1039)
++++++..++++.+.++ + +|.+.|++|.+|+.+++++++.+++..+.|++-.+.+-
T Consensus 828 ~~~~~~~~~~~~~~~~~-~-~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~ 883 (920)
T 1mhs_A 828 SGAIFLVDILATCFTIW-G-WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSVG 883 (920)
T ss_dssp HHHHHHHHHHHHHHHSS-S-STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCCCT
T ss_pred HHHHHHHHHHHHHHHHH-H-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999976-5-63167889999999999999999999999999860487
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=1068.10 Aligned_cols=814 Identities=21% Similarity=0.323 Sum_probs=628.4
Q ss_pred CHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 98899988189989999999999997212998568899981999999998567999999999997641577778898643
Q 001638 119 GVEGLAREVSVSLPDGVASEEVSNRQNVYGFNRYAEKPARSFWMFVWEALHDLTLIILMICAAVSIGVGIPTEGWPDGVY 198 (1039)
Q Consensus 119 gv~g~~~~l~t~~~~Gl~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~i~a~isl~~~~~~~~~~~~~~ 198 (1039)
.++++.+.|+++ .+||+.+|+++|++.||+|+++.++ +++|..++++|.++..++|+++++++++++... +.+..|+
T Consensus 18 ~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~-~~~~~~~ 94 (885)
T 3b8c_A 18 PIEEVFQQLKCS-REGLTTQEGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD-GRPPDWQ 94 (885)
T ss_dssp STTCCTTTSSSC-SSCSTHHHHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-TSCSCCT
T ss_pred CHHHHHHHHCCC-CCCCCHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHH
T ss_conf 999999983899-9998999999999851997158878-879999999999999999999999999997045-6630188
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEECC
Q ss_conf 13678999999999999999999999999731039945999969969998737754483999758980011189995073
Q 001638 199 DGLGIVLSILLVVIVTAVSDYKQSLQFKALDKEKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPADGILISGYS 278 (1039)
Q Consensus 199 ~~~~i~~~illv~~vta~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgiii~g~~ 278 (1039)
|++.|++.+++...+..+.+++.++..+++.+ ..+..++|+|||++++|+++||+|||+|.|++||+|||||++++|++
T Consensus 95 ~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~-~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~ 173 (885)
T 3b8c_A 95 DFVGIICLLVINSTISFIEENNAGNAAAALMA-GLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP 173 (885)
T ss_dssp THHHHHHHTTTTTTTTTTTTTTTTTHHHHTTT-SCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEECCC
T ss_conf 99999999999999999999999999999733-49986999999989998989979897899889999930359997675
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH-H
Q ss_conf 268666777899742248999612215178528758999884131146789887305898888037878679999999-9
Q 001638 279 LTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATVIGK-I 357 (1039)
Q Consensus 279 l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~-~ 357 (1039)
|.||||+|||||.|+.|..++ .+|+||.+.+|.++++|++||.+|++|++.+++.+ ..+++|+|+.+++++.++.. +
T Consensus 174 l~VdES~LTGES~Pv~K~~g~-~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~ 251 (885)
T 3b8c_A 174 LKVDQSALTGESLPVTKHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSI 251 (885)
T ss_dssp BCCCCCSTTCCSSCCCBSSCC-CCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEECCCC-CCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHH
T ss_conf 400344468888645834898-30267599511799999975730199999999864-6446849999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999984300245554203467899999999998886504751499999999999996012111256
Q 001638 358 GLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRH 437 (1039)
Q Consensus 358 ~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aitilvvaiP~~Lplavtl~la~~~~~l~~~~ilvr~ 437 (1039)
.+.+++++++++. + . ...| ...+..++++++++|||+||+++++++++++.+|.++|+++|+
T Consensus 252 ~~~~~~~~~~~~~---~----~---~~~~--------~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~ 313 (885)
T 3b8c_A 252 AIGMVIEIIVMYP---I----Q---RRKY--------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 313 (885)
T ss_dssp HHHHHHHSTTTTT---T----T---CSCS--------TTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSS
T ss_pred HHHHHHHHHHHHH---H----C---CCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
T ss_conf 9999999999999---8----0---6869--------9999999999999703689999999999999999719869689
Q ss_pred CHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCC
Q ss_conf 60111036606999347674434943999999737421114699634558889889999999999851597243338997
Q 001638 438 LSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVVKDKDGR 517 (1039)
Q Consensus 438 ~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~ 517 (1039)
++++|+||++++||||||||||+|+|+|.+.++. .+ . ...+++ +++..+ +.|+..
T Consensus 314 ~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~----~-------~~~~~~--~ll~~a-a~~~~~--------- 368 (885)
T 3b8c_A 314 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF----C-------KGVEKD--QVLLFA-AMASRV--------- 368 (885)
T ss_dssp GGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS----C-------SSTTHH--HHHHHH-HHHCCS---------
T ss_pred CHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEE--CC----C-------CCCCHH--HHHHHH-HHHHCC---------
T ss_conf 5188897679989987998761685279987775--15----8-------999999--999999-997278---------
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCC
Q ss_conf 11048901899999999939994101235607898348999970289997489980799991847899953233121599
Q 001638 518 TNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDKIINADG 597 (1039)
Q Consensus 518 ~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~~~~~~~~~KGa~e~Il~~C~~~~~~~g 597 (1039)
..+||+|.|+++++.+ ....+..+++++.+||+|.+|||+++++..+ ++.+.++|||||.++++|+.
T Consensus 369 --~~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~-g~~~~~~KGa~e~il~~c~~------ 435 (885)
T 3b8c_A 369 --ENQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGS-GNWHRVSKGAPEQILELAKA------ 435 (885)
T ss_dssp --SSCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSS-SCBCBCCCCSGGGTSSSSCC------
T ss_pred --CCCCCHHHHHHHHHHC----HHHHHHCCCEEECCCCCCCCCEEEEEEEECC-CCEEEEEECCHHHHHHHCCC------
T ss_conf --8999158999998646----3657624832201357852256899998048-96899994889999976458------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEE
Q ss_conf 40139999999999999999470371778999756899876788888927622301359999117999999997899799
Q 001638 598 KAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLAAGITVR 677 (1039)
Q Consensus 598 ~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l~llG~i~i~D~lr~~v~~aI~~l~~aGI~v~ 677 (1039)
+++.++.+.+.+++++.+|+|++++||++++..+ .+..|++++|+|+++++||+||+++++|+.|+++||+++
T Consensus 436 -----~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~--~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~ 508 (885)
T 3b8c_A 436 -----SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT--KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVK 508 (885)
T ss_dssp -----CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS--SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCE
T ss_pred -----CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC--CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEE
T ss_conf -----6445799999999998579869999994466433--111356757999999606661208999999997699689
Q ss_pred EECCCCHHHHHHHHHHCCCCCC--CCCEEECCCCCC-CCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 9878999999999999199779--971131732234-8988998432651499962941199999998520898999993
Q 001638 678 MVTGDNIHTAKAIAKECGILTD--GGLAIEGTDFRS-KNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVAVTG 754 (1039)
Q Consensus 678 miTGD~~~ta~aiA~~~GI~~~--~~~vi~g~~~~~-~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~l~~~~g~vVa~iG 754 (1039)
|+||||..||+++|+++||..+ ...+++|.+++. +.++++++.+.+..||+|++|+||..+|+.+|++ |++|+|+|
T Consensus 509 MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g~~Vam~G 587 (885)
T 3b8c_A 509 MITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGMTG 587 (885)
T ss_dssp EEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-TCCCCBCC
T ss_pred EECCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHC-CCEEEEEC
T ss_conf 99399869999999980976466775144555312224635799998638689887899999999999977-99699975
Q ss_pred CCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99569887620892353068872888841488860499038999999968998989999999999999999999999997
Q 001638 755 NGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVAACI 834 (1039)
Q Consensus 755 DG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~~~~ 834 (1039)
||.||+|||++||+||||| +|+++||++||+++++|+|++|+.++++||++|+||+|++.|++++|+..++..+ ....
T Consensus 588 DGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~-~~~~ 665 (885)
T 3b8c_A 588 DGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM-LIAL 665 (885)
T ss_dssp CSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTH-HHHS
T ss_pred CCCHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_conf 9812299998699759957-7129999843401335766689999999999999999999999999999999999-9997
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC--C-
Q ss_conf 0999557999999997766897857056999866547899998877641787999999899999999999771000--1-
Q 001638 835 TGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMQRPPIGRNVHFITVTMWRNIIGQSIYQIIVLGVLTFCGKK--I- 911 (1039)
Q Consensus 835 ~~~~pl~~vqllwinli~d~l~alaLa~e~p~~~lm~r~P~~~~~~li~~~m~~~i~~~~i~q~~v~~~l~~~~~~--~- 911 (1039)
..+.|++++|++|+|+++|..+ +++++|++.+. ++| +...+ +.++...+..++++.+..+.+++.+.. +
T Consensus 666 ~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 737 (885)
T 3b8c_A 666 IWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFF 737 (885)
T ss_dssp SCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHH-HHHCCCCCCCC---CCC---CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 0386758899999999987778-74046546754---587---30358-9999999999999999999999999973765
Q ss_pred ---CCCCCCC-CCCHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf ---1468998-32202-478999999999999977514654332124513499999999999999998724323013557
Q 001638 912 ---LKLSGPN-ATLIL-NTFIFNSFVFCQVFNEINSRDMEKINVFRGIFSSWVFIAVLVATVGFQVIIVELLGTFATTVP 986 (1039)
Q Consensus 912 ---~~~~~~~-~~~~~-~t~~f~~~v~~qifn~~n~r~~~~~~~f~~~~~n~~f~~~~~~~~~~q~~~v~~~~~~~~~~~ 986 (1039)
++.+... ..... .++.|.+++++|+ +.|++|+.. ..+|+.. .|++++.+++..++.|++.++....++++.|
T Consensus 738 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (885)
T 3b8c_A 738 SDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRS-WSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAKIRG 814 (885)
T ss_dssp TCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT-TTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSCCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHCCCC-CCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 223575411022999999999999999999-999764588-8701186-4999999999999999999860221031377
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89688999999998889999988560047
Q 001638 987 LNWKLWLASVVIGAISMPFGVLLKCIPVG 1015 (1039)
Q Consensus 987 l~~~~w~~~~~~~~~~~~~~~~~k~i~~~ 1015 (1039)
++|.+|+++++++++.+++..+.|++...
T Consensus 815 l~~~~~~~~~~~~~~~~~~~e~~k~~~~~ 843 (885)
T 3b8c_A 815 IGWGWAGVIWLYSIVTYFPLDVFKFAIRY 843 (885)
T ss_dssp CTTTTHHHHHHHTGGGTHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 60999999999999999999999999997
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=723.45 Aligned_cols=543 Identities=26% Similarity=0.366 Sum_probs=441.2
Q ss_pred CCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-CCEEEEEECCCCCCCCEEEECCCCCCCCCE
Q ss_conf 986431367899999999-999999999999999973103994599996-996999873775448399975898001118
Q 001638 194 PDGVYDGLGIVLSILLVV-IVTAVSDYKQSLQFKALDKEKKNLIVQVTR-DGYRKKLSIYDLVVGDIVHLSIGDQVPADG 271 (1039)
Q Consensus 194 ~~~~~~~~~i~~~illv~-~vta~~~~~~~~~~~~l~~~~~~~~v~V~R-~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDg 271 (1039)
...|+|++++++.++++. .++.....+.++..+++.+ ..+..++|+| ||++++|++++|+|||+|.+++||+|||||
T Consensus 184 ~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~-l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg 262 (736)
T 3rfu_A 184 VAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLK-LVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDG 262 (736)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTC-CCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCE
T ss_conf 43089999999999999999999999999999999883-39988999952998999877668989889987997515637
Q ss_pred EEEEECCEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 99950732686667778997422489996122151785287589998841311467898873058988880378786799
Q 001638 272 ILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVA 351 (1039)
Q Consensus 272 iii~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a 351 (1039)
++++|++ .||||+|||||.|+.|..++. +++||.+.+|.++++|+++|.+|.++++.+++.+++.+++|+|+..++++
T Consensus 263 ~vl~G~~-~VDES~LTGES~Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a 340 (736)
T 3rfu_A 263 EVQEGRS-FVDESMVTGEPIPVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVS 340 (736)
T ss_dssp EECSSCE-EEECSSSTTCSSCEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHH
T ss_pred EEEECCE-EEEECCCCCCCCCEEECCCCC-CCCCEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 9997866-765123578614278316886-77864861450999999841225999999999974326897999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999984300245554203467899999999998886504751499999999999996012
Q 001638 352 TVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMND 431 (1039)
Q Consensus 352 ~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aitilvvaiP~~Lplavtl~la~~~~~l~~~ 431 (1039)
.++.++.+.+++++|++|... + .... +...+..++++++++|||+|++++|+++..++.++.++
T Consensus 341 ~~~v~~vl~ia~~~~~~w~~~---~-----~~~~--------~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~ 404 (736)
T 3rfu_A 341 GWFVPAVILVAVLSFIVWALL---G-----PQPA--------LSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQS 404 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---C-----SSSS--------TTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHH---C-----CCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999999996---7-----8732--------99999998774877324278888999999999997515
Q ss_pred CCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf 11125660111036606999347674434943999999737421114699634558889889999999999851597243
Q 001638 432 KALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSEVV 511 (1039)
Q Consensus 432 ~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~ 511 (1039)
|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. .++.+. .+....
T Consensus 405 gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------~~~~l~---~aa~le------ 459 (736)
T 3rfu_A 405 GVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV----------------EDNALA---LAAALE------ 459 (736)
T ss_dssp TEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC----------------HHHHHH---HHHHHH------
T ss_pred CEEECHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCC----------------HHHHHH---HHHHHH------
T ss_conf 1332337899986279999981898875895279999834887----------------789999---999986------
Q ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHH
Q ss_conf 33899711048901899999999939994101235607898348999970289997489980799991847899953233
Q 001638 512 KDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMCDK 591 (1039)
Q Consensus 512 ~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~~~~~~~~~KGa~e~Il~~C~~ 591 (1039)
..+.||.+.|+++++...+.... ...+|++..++. +....++ . .+.+|+++.+...+..
T Consensus 460 -------~~s~hPla~Aiv~~a~~~~~~~~---------~~~~f~~~~g~g-v~~~~~g-~---~~~~G~~~~~~~~~~~ 518 (736)
T 3rfu_A 460 -------HQSEHPLANAIVHAAKEKGLSLG---------SVEAFEAPTGKG-VVGQVDG-H---HVAIGNARLMQEHGGD 518 (736)
T ss_dssp -------HSSCCHHHHHHHHHHHTTCCCCC---------CCSCCCCCTTTE-EEECSSS-S---CEEEESHHHHHHHCCC
T ss_pred -------HCCCCHHHHHHHHHHHHCCCCCC---------CCCCCCCCCCCE-EEEEECC-E---EEEECCHHHHHHCCCC
T ss_conf -------22899289999999996599866---------754320248865-8999999-8---9997389999873997
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 12159940139999999999999999470371778999756899876788888927622301359999117999999997
Q 001638 592 IINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETCLA 671 (1039)
Q Consensus 592 ~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l~llG~i~i~D~lr~~v~~aI~~l~~ 671 (1039)
...+.+..++++.+|+|++++|+ |.+++|+++++|++||+++++|+.|++
T Consensus 519 ---------------~~~~~~~~~~~~~~G~~vl~va~---------------d~~~~G~i~i~D~i~~~~~~aI~~L~~ 568 (736)
T 3rfu_A 519 ---------------NAPLFEKADELRGKGASVMFMAV---------------DGKTVALLVVEDPIKSSTPETILELQQ 568 (736)
T ss_dssp ---------------CHHHHHHHHHHHHTTCEEEEEEE---------------TTEEEEEEEEECCBCSSHHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHHHHCCCEEEEEEE---------------CCEEEEEEEEECCCHHHHHHHHHHHHH
T ss_conf ---------------16789999999856986999987---------------998999998503220309999999998
Q ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 89979998789999999999991997799711317322348988998432651499962941199999998520898999
Q 001638 672 AGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEVVA 751 (1039)
Q Consensus 672 aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~l~~~~g~vVa 751 (1039)
+|++++|+|||+..+|+++|+++||.. ++++++|+||..+|+.+|+. |+.|+
T Consensus 569 ~Gi~v~mlTGd~~~~a~~ia~~lgi~~---------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~ 620 (736)
T 3rfu_A 569 SGIEIVMLTGDSKRTAEAVAGTLGIKK---------------------------VVAEIMPEDKSRIVSELKDK-GLIVA 620 (736)
T ss_dssp HTCEEEEECSSCHHHHHHHHHHHTCCC---------------------------EECSCCHHHHHHHHHHHHHH-SCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCE---------------------------EEEECCHHHHHHHHHHHHHC-CCEEE
T ss_conf 799499987989899999999859987---------------------------99706999999999999966-99899
Q ss_pred EECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99399569887620892353068872888841488860499038999999968998989999999999999999999999
Q 001638 752 VTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINFVA 831 (1039)
Q Consensus 752 ~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~~~ 831 (1039)
|+|||.||+|||++||+||||| +|+++++++||++++++++.+|+.++++||++++||++|+.|++.||+++++++.-.
T Consensus 621 ~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAag~ 699 (736)
T 3rfu_A 621 MAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAAGV 699 (736)
T ss_dssp EEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9989857699998699779947-865999976999992698789999999999999999999999999999999999987
Q ss_pred -HHHCC--CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -99709--995579999999977668978570
Q 001638 832 -ACITG--SAPLTAVQLLWVNMIMDTLGALAL 860 (1039)
Q Consensus 832 -~~~~~--~~pl~~vqllwinli~d~l~alaL 860 (1039)
..+.| -+|.-+.-....+-+.-.+.++-|
T Consensus 700 l~p~~G~~l~P~~aa~~m~~Ssv~Vv~nslrl 731 (736)
T 3rfu_A 700 LYPLTGLLLSPMIAAAAMALSSVSVIINALRL 731 (736)
T ss_dssp STTTSSCCCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87750431329999999974399999998986
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=696.50 Aligned_cols=532 Identities=25% Similarity=0.338 Sum_probs=429.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCCC
Q ss_conf 64313678999999999999999999999999731------039945999969969998737754483999758980011
Q 001638 196 GVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDK------EKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPA 269 (1039)
Q Consensus 196 ~~~~~~~i~~~illv~~vta~~~~~~~~~~~~l~~------~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 269 (1039)
.||+..++++.++++. +|.+.++.++..+ ...+..++|+|||++++|+++||+|||+|.+++||+|||
T Consensus 172 ~~~~~~~~i~~~~~ig------~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPa 245 (723)
T 3j09_A 172 SFYETSVLLLAFLLLG------RTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPV 245 (723)
T ss_dssp CCCTTHHHHHHHHHHH------HHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCS
T ss_pred HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEE
T ss_conf 3999999999999999------9999999999999998887269975699989989998989979998999889998856
Q ss_pred CEEEEEECCEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 18999507326866677789974224899961221517852875899988413114678988730589888803787867
Q 001638 270 DGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNG 349 (1039)
Q Consensus 270 Dgiii~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~ 349 (1039)
||++++|++ .||||+|||||.|+.|..++. +++||.+.+|.++++|+++|.+|.++++.+++.+++.+++|+|+..++
T Consensus 246 Dg~vl~G~~-~VdeS~LTGES~pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~ 323 (723)
T 3j09_A 246 DGVVVEGES-YVDESMISGEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADK 323 (723)
T ss_dssp EEEEEECCE-EEECHHHHCCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHH
T ss_pred EEEEEECCE-EEECCCCCCCCCCEEECCCCE-ECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 799997776-886000138876466368982-304169706729999998467439999999999753469838999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999843002455542034678999999999988865047514999999999999960
Q 001638 350 VATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLM 429 (1039)
Q Consensus 350 ~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aitilvvaiP~~Lplavtl~la~~~~~l~ 429 (1039)
++.++.++.+.++++++++|... ....+...+..++++++++|||+|++++|+++..++.++.
T Consensus 324 ~~~~~~~~vl~~a~~~~~~~~~~-----------------~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a 386 (723)
T 3j09_A 324 VVAYFIPTVLLVAISAFIYWYFI-----------------AHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGA 386 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCSS-----------------TTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999985-----------------6886999999999999750267899999999999999999
Q ss_pred CCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 12111256601110366069993476744349439999997374211146996345588898899999999998515972
Q 001638 430 NDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSE 509 (1039)
Q Consensus 430 ~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~ 509 (1039)
++|+++|+++++|++|++++||||||||||+|+|+|.+++..+.. .++.+. .+....
T Consensus 387 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~~l~---~aa~~e---- 443 (723)
T 3j09_A 387 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLR---LAAIAE---- 443 (723)
T ss_dssp TTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC----------------HHHHHH---HHHHHH----
T ss_pred HCCEEEECHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCC----------------HHHHHH---HHHHHH----
T ss_conf 889389482899876249899984777552696279999807999----------------899999---999985----
Q ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHH
Q ss_conf 43338997110489018999999999399941012356078983489999702899974899807999918478999532
Q 001638 510 VVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMC 589 (1039)
Q Consensus 510 ~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~~~~~~~~~KGa~e~Il~~C 589 (1039)
..+.||++.|+++++...+....... +|.+...+ ++.. ..+.+|+++.+.+.
T Consensus 444 ---------~~s~hP~~~Ai~~~a~~~~~~~~~~~---------~~~~~~g~-g~~~--------~~~~~g~~~~~~~~- 495 (723)
T 3j09_A 444 ---------RRSEHPIAEAIVKKALEHGIELGEPE---------KVEVIAGE-GVVA--------DGILVGNKRLMEDF- 495 (723)
T ss_dssp ---------TTCCSHHHHHHHHHHHHTTCCCCSCC---------CCEEETTT-EEEE--------TTEEEECHHHHHHT-
T ss_pred ---------CCCCCCHHHHHHHHHHHCCCCCCCCC---------CEEEECCC-CEEE--------EEEEECCHHHHHHC-
T ss_conf ---------04999542899999985499857864---------45996698-1699--------99997789999754-
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 33121599401399999999999999994703717789997568998767888889276223013599991179999999
Q 001638 590 DKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETC 669 (1039)
Q Consensus 590 ~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l~llG~i~i~D~lr~~v~~aI~~l 669 (1039)
+. +.. +.+.+.++.++.+|+|++++|+ |++++|+++++|++||+++++|+.|
T Consensus 496 -------~~--~~~----~~~~~~~~~~~~~g~~~~~va~---------------~~~~~G~i~i~D~~~~~~~~~i~~l 547 (723)
T 3j09_A 496 -------GV--AVS----NEVELALEKLEREAKTAVIVAR---------------NGRVEGIIAVSDTLKESAKPAVQEL 547 (723)
T ss_dssp -------TC--CCC----HHHHHHHHHHHTTTCEEEEEEE---------------TTEEEEEEEEECCSCTTHHHHHHHH
T ss_pred -------CC--CCC----HHHHHHHHHHHHCCCEEEEEEE---------------CCEEEEEEEECCCCCHHHHHHHHHH
T ss_conf -------99--860----8999999999855982899978---------------9999999960687525699999999
Q ss_pred HHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCE
Q ss_conf 97899799987899999999999919977997113173223489889984326514999629411999999985208989
Q 001638 670 LAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEV 749 (1039)
Q Consensus 670 ~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~l~~~~g~v 749 (1039)
+++|++++|+|||+..+|+++|+++||.. ++++++|+||...|+.+|+. +.
T Consensus 548 ~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~~K~~~v~~l~~~--~~ 598 (723)
T 3j09_A 548 KRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVKKLQAK--EV 598 (723)
T ss_dssp HHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHHHHTTT--CC
T ss_pred HHCCCEEEEECCCCHHHHHHHHHHCCCCE---------------------------EECCCCHHHHHHHHHHHHCC--CE
T ss_conf 97799799999989899999999859938---------------------------99268999999999998349--93
Q ss_pred EEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99993995698876208923530688728888414888604990389999999689989899999999999999999999
Q 001638 750 VAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINF 829 (1039)
Q Consensus 750 Va~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~ 829 (1039)
|+|+|||.||+|||++||+||||| +|++.++++||++++++++.+++.++++||++++||++|+.|++++|++++++++
T Consensus 599 v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 677 (723)
T 3j09_A 599 VAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAA 677 (723)
T ss_dssp EEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999989823099995499879967-8759999869999967998899999999999999999999999999999999999
Q ss_pred HHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999970---99955799999999776689785705
Q 001638 830 VAACIT---GSAPLTAVQLLWVNMIMDTLGALALA 861 (1039)
Q Consensus 830 ~~~~~~---~~~pl~~vqllwinli~d~l~alaLa 861 (1039)
.+.... .-.|..+.-....+.+.-.+.++-|.
T Consensus 678 ~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~ 712 (723)
T 3j09_A 678 GLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLR 712 (723)
T ss_dssp HTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCC
T ss_pred HHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHC
T ss_conf 75654015514889999998154899999778752
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=691.34 Aligned_cols=532 Identities=25% Similarity=0.333 Sum_probs=429.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCCC
Q ss_conf 64313678999999999999999999999999731------039945999969969998737754483999758980011
Q 001638 196 GVYDGLGIVLSILLVVIVTAVSDYKQSLQFKALDK------EKKNLIVQVTRDGYRKKLSIYDLVVGDIVHLSIGDQVPA 269 (1039)
Q Consensus 196 ~~~~~~~i~~~illv~~vta~~~~~~~~~~~~l~~------~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 269 (1039)
.||+..++++.++++. ++.+.++.++..+ ...+..++|+|||++++|+++||+|||+|.+++||+|||
T Consensus 94 ~~~~~~~~i~~~~~ig------~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPa 167 (645)
T 3j08_A 94 SFYETSVLLLAFLLLG------RTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPV 167 (645)
T ss_dssp SCCCSHHHHHHHHHHH------HHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCS
T ss_pred HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEE
T ss_conf 5999999999999999------9999999999999999986179997999999979998899979899999889998866
Q ss_pred CEEEEEECCEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 18999507326866677789974224899961221517852875899988413114678988730589888803787867
Q 001638 270 DGILISGYSLTIDESSLSGETEPVHINRDRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNG 349 (1039)
Q Consensus 270 Dgiii~g~~l~VDES~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~ 349 (1039)
||++++|++ .||||+|||||.|+.|..++. +++||.+.+|.++++|+++|.+|.+|++.+++.+++.+++|+|+..++
T Consensus 168 Dg~vl~G~~-~VdeS~LTGES~Pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~ 245 (645)
T 3j08_A 168 DGVVVEGES-YVDESMISGEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADK 245 (645)
T ss_dssp EEEEEECCE-EEECHHHHCCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHH
T ss_pred EEEEEECCE-EEECCCCCCCCCCEECCCCCE-EECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 899998868-998022469987656089997-416679825729999997277459999999999731469858999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999843002455542034678999999999988865047514999999999999960
Q 001638 350 VATVIGKIGLVFAVLTFLVLALRFLVEKAQHHQIKHWSSIDAMKLLNYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLM 429 (1039)
Q Consensus 350 ~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aitilvvaiP~~Lplavtl~la~~~~~l~ 429 (1039)
++.++.++.+.++++++++|... ....| ...+..++++++++|||+||+++|+++..++.++.
T Consensus 246 ~~~~~~~~vl~~a~~~~~~~~~~---------~~~~~--------~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a 308 (645)
T 3j08_A 246 VVAYFIPTVLLVAISAFIYWYFI---------AHAPL--------LFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGA 308 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCC---------CSCSC--------CCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---------CCCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999995---------69869--------99999999999987366899999999999999999
Q ss_pred CCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 12111256601110366069993476744349439999997374211146996345588898899999999998515972
Q 001638 430 NDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSIFQNTGSE 509 (1039)
Q Consensus 430 ~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~ 509 (1039)
++|+++|+++++|++|++++||||||||||+|+|+|.+++..+.. .++.+. .+....
T Consensus 309 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~----------------~~~~l~---~aa~~e---- 365 (645)
T 3j08_A 309 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLR---LAAIAE---- 365 (645)
T ss_dssp TTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC----------------HHHHHH---HHHHHH----
T ss_pred HCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCC----------------HHHHHH---HHHHHH----
T ss_conf 779376681699986279999986866655897079999817999----------------799999---999975----
Q ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHH
Q ss_conf 43338997110489018999999999399941012356078983489999702899974899807999918478999532
Q 001638 510 VVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGASEIILNMC 589 (1039)
Q Consensus 510 ~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~~~~~~~~~KGa~e~Il~~C 589 (1039)
..+.||++.|+++++...|....... +|.+...+ ++.. ..+.+|+++.+.+.
T Consensus 366 ---------~~s~hPla~Aiv~~a~~~g~~~~~~~---------~~~~~~g~-g~~~--------~~v~~g~~~~~~~~- 417 (645)
T 3j08_A 366 ---------RRSEHPIAEAIVKKALEHGIELGEPE---------KVEVIAGE-GVVA--------DGILVGNKRLMEDF- 417 (645)
T ss_dssp ---------TTCCSHHHHHHHHHHHHTTCCCCSCC---------CCEEETTT-EEEE--------TTEEEECHHHHHHT-
T ss_pred ---------HCCCCHHHHHHHHHHHHCCCCCCCCC---------CEEEECCC-CEEE--------EEEEECCHHHHHHC-
T ss_conf ---------15887467999999996599867865---------35996588-4699--------99998879999754-
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 33121599401399999999999999994703717789997568998767888889276223013599991179999999
Q 001638 590 DKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGVREAVETC 669 (1039)
Q Consensus 590 ~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l~llG~i~i~D~lr~~v~~aI~~l 669 (1039)
+. +.. +.+.+..++++.+|+|++++++ |++++|+++++|++||+++++|+.|
T Consensus 418 -------~~--~~~----~~~~~~~~~~~~~g~~~l~va~---------------~~~~~G~i~~~D~l~~~~~~~i~~L 469 (645)
T 3j08_A 418 -------GV--AVS----NEVELALEKLEREAKTAVIVAR---------------NGRVEGIIAVSDTLKESAKPAVQEL 469 (645)
T ss_dssp -------TC--CCC----HHHHHHHHHHHTTTCCCEEEEE---------------TTEEEEEEEEECCCTTTHHHHHHHH
T ss_pred -------CC--CCC----HHHHHHHHHHHHCCCEEEEEEE---------------CCEEEEEEEECCCCHHHHHHHHHHH
T ss_conf -------98--751----8899999999855983899988---------------9999999993487656799999999
Q ss_pred HHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCE
Q ss_conf 97899799987899999999999919977997113173223489889984326514999629411999999985208989
Q 001638 670 LAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQLRNVFKEV 749 (1039)
Q Consensus 670 ~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~l~~~~g~v 749 (1039)
+++|++++|+|||+..+|+++|+++|+.. ++++++|++|...++.+++. +.
T Consensus 470 ~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~~K~~~v~~l~~~--~~ 520 (645)
T 3j08_A 470 KRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVKKLQAK--EV 520 (645)
T ss_dssp HHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHHHHTTT--CC
T ss_pred HHCCCEEEEEECCCHHHHHHHHHHCCCCE---------------------------EEEECCHHHHHHHHHHHHHC--CE
T ss_conf 97799799990888799999999839978---------------------------99837877689999998609--95
Q ss_pred EEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99993995698876208923530688728888414888604990389999999689989899999999999999999999
Q 001638 750 VAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKFVQFQLTVNIVALVINF 829 (1039)
Q Consensus 750 Va~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~k~i~f~l~~Ni~~i~~~~ 829 (1039)
|+|+|||.||+|||++||+||||| +|++.++++||++++++++.+++.++++||++++||++|+.|++++|++++++++
T Consensus 521 v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~ 599 (645)
T 3j08_A 521 VAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAA 599 (645)
T ss_dssp EEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999969776899997599889948-8759999869999936998899999999999999999999999999999999999
Q ss_pred HHHHH-C--CCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99997-0--99955799999999776689785705
Q 001638 830 VAACI-T--GSAPLTAVQLLWVNMIMDTLGALALA 861 (1039)
Q Consensus 830 ~~~~~-~--~~~pl~~vqllwinli~d~l~alaLa 861 (1039)
.+... . .-.|.-+.-....+.+.-.+.++-|.
T Consensus 600 ~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~ 634 (645)
T 3j08_A 600 GLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLR 634 (645)
T ss_dssp TTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSCC
T ss_pred HHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHC
T ss_conf 86765103533899999987151689887568761
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=250.99 Aligned_cols=260 Identities=23% Similarity=0.333 Sum_probs=194.9
Q ss_pred HHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999601211125660111036606999347674434943999999737421114699634558889889999999999
Q 001638 423 FAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSI 502 (1039)
Q Consensus 423 ~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 502 (1039)
.++.++.++|+++|++.++|.|+++++||||||||||+|+|.|.+++ .. +..+... .++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~------------------~~~l~~~-~~~ 62 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD------------------SLSLAYA-ASV 62 (263)
Q ss_pred HHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCH
Q ss_conf 85159724333899711048901899999999939994101235607898348999970289997489980799991847
Q 001638 503 FQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGFRVFCKGAS 582 (1039)
Q Consensus 503 ~~n~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~~~~~~~~~KGa~ 582 (1039)
. ..+.+|...|+..++...|...... ..|. ...+ .+....+.+..
T Consensus 63 e---------------~~s~hp~a~ai~~~~~~~g~~~~~~---------~~~~----------~~~G-~g~~~~~~~~~ 107 (263)
T 2yj3_A 63 E---------------ALSSHPIAKAIVKYAKEQGVKILEV---------KDFK----------EISG-IGVRGKISDKI 107 (263)
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
Q ss_conf 89995323312159940139999999999999999470371778999756899876788888927622301359999117
Q 001638 583 EIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRPGV 662 (1039)
Q Consensus 583 e~Il~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l~llG~i~i~D~lr~~v 662 (1039)
.. -|. . .++.+ +.++ .+..+.|.+.+.|+++|++
T Consensus 108 ~~-----------~G~------~-------------~~~~~-~~~~---------------~~~~~~~~~~~~~~~~~g~ 141 (263)
T 2yj3_A 108 IE-----------VKK------A-------------ENNND-IAVY---------------INGEPIASFNISDVPRPNL 141 (263)
Q ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Q ss_conf 99999999789979998789999999999991997799711317322348988998432651499962941199999998
Q 001638 663 REAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVTQL 742 (1039)
Q Consensus 663 ~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~l 742 (1039)
.++++.|++.|+++.|+|||+..++..+++++|+.. +|+...|++|...++.+
T Consensus 142 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 142 KDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPEDKVRIIEKL 194 (263)
Q ss_pred HHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 52089899999399569887620892353068872888841488860499038999999968998989999
Q 001638 743 RNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQKF 813 (1039)
Q Consensus 743 ~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~k~ 813 (1039)
+.. ++.|+|+|||.||++|++.|++|+++| .+++.+++.+|++++++++..+..+++.+|.++.+|++|
T Consensus 195 ~~~-~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 195 KQN-GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=205.71 Aligned_cols=278 Identities=28% Similarity=0.396 Sum_probs=212.8
Q ss_pred HHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999601211125660111036606999347674434943999999737421114699634558889889999999999
Q 001638 423 FAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVTKLWICNEAKTIKSGDNEKLLKPSVSDAVFNIFLQSI 502 (1039)
Q Consensus 423 ~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 502 (1039)
-+.+++.++|+++|+++++|+|+++++||||||||||.+.+.+.+++..+.. .+..+.+ ..++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~~----------------~~~~l~~-~~~~ 70 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLRL-AAIA 70 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSSC----------------HHHHHHH-HHHH
T ss_pred HHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCC----------------HHHHHHH-HHHH
T ss_conf 1578998799799680899885369999996899882897799999817999----------------9999999-9997
Q ss_pred HHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEE--EEEEEC
Q ss_conf 851597243338997110489018999999999399941012356078983489999702899974899807--999918
Q 001638 503 FQNTGSEVVKDKDGRTNILGTPTERAILEFGLILGGDSTFHREESAIVKVEPFNSVKKRMSVLVSLPNNGGF--RVFCKG 580 (1039)
Q Consensus 503 ~~n~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~krmsviv~~~~~~~~--~~~~KG 580 (1039)
. ..+.+|.+.|+..++...|....... . ...+ .+ .+. ..+.+|
T Consensus 71 --e-------------~~s~hp~~~a~~~~~~~~g~~~~~~~-~---~~~~---------------~G-~~~~~~~~~~g 115 (287)
T 3a1c_A 71 --E-------------RRSEHPIAEAIVKKALEHGIELGEPE-K---VEVI---------------AG-EGVVADGILVG 115 (287)
T ss_dssp --T-------------TTCCSHHHHHHHHHHHHTTCCCCCCS-C---EEEE---------------TT-TEEEETTEEEE
T ss_pred --H-------------HCCCCHHHHHHHHHHHHCCCCCCCCC-C---CEEE---------------CC-CCEEEEEEEEC
T ss_conf --5-------------21799799999999986599855554-4---1462---------------48-87288999988
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 47899953233121599401399999999999999994703717789997568998767888889276223013599991
Q 001638 581 ASEIILNMCDKIINADGKAVPISEEQRKNLTNVINGFSSEALRTLCLAFQDIKGNHKAESIPENNYTLIAVVGIKDPVRP 660 (1039)
Q Consensus 581 a~e~Il~~C~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~lAyk~i~~~~~~~~~~e~~l~llG~i~i~D~lr~ 660 (1039)
.++.+... +. ++++ .+.+..+.+..+|.+++++++ +..+.+.+...++++|
T Consensus 116 ~~~~~~~~--------~~--~~~~----~~~~~~~~~~~~g~~~i~~~~---------------d~~~~~~~~~~~~~~~ 166 (287)
T 3a1c_A 116 NKRLMEDF--------GV--AVSN----EVELALEKLEREAKTAVIVAR---------------NGRVEGIIAVSDTLKE 166 (287)
T ss_dssp CHHHHHHT--------TC--CCCH----HHHHHHHHHHHTTCEEEEEEE---------------TTEEEEEEEEECCBCT
T ss_pred CHHHHHHC--------CC--CCCH----HHHHHHHHHHHCCCEEEEEEE---------------CCEEEEEEEECCCCCH
T ss_conf 99999865--------99--7507----789999998747975999999---------------9989999995453614
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHH
Q ss_conf 17999999997899799987899999999999919977997113173223489889984326514999629411999999
Q 001638 661 GVREAVETCLAAGITVRMVTGDNIHTAKAIAKECGILTDGGLAIEGTDFRSKNPQEMQELIPKLQVMARSSPTDKYILVT 740 (1039)
Q Consensus 661 ~v~~aI~~l~~aGI~v~miTGD~~~ta~aiA~~~GI~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~ 740 (1039)
++.++++.|+++|+++.++||++...+..+.+.+|+.. .|....|..|...++
T Consensus 167 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~f~~i~~~~K~~~~~ 219 (287)
T 3a1c_A 167 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVK 219 (287)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCE---------------------------EEEECCHHHHHHHHH
T ss_conf 18999999997798599990989899999999809813---------------------------110058177999999
Q ss_pred HHHHCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 98520898999993995698876208923530688728888414888604990389999999689989899
Q 001638 741 QLRNVFKEVVAVTGNGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVTVARWGRSVYINIQ 811 (1039)
Q Consensus 741 ~l~~~~g~vVa~iGDG~NDa~aL~~AdVGIamgi~gt~vak~~aDivl~~~~f~~i~~~i~~gR~~~~nI~ 811 (1039)
.++.. +.++|+||+.||.+|.+.|+++++++ ++.+..++.+|+++.++++..+..++..+|.++.+|+
T Consensus 220 ~l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 220 KLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHTTT--CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHCC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 98258--83999979777899999789529967-8877889629999947998999999999999998509
Done!