BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001639
(1039 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1
OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2
Length = 1041
Score = 1501 bits (3885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 796/1052 (75%), Positives = 895/1052 (85%), Gaps = 24/1052 (2%)
Query: 1 MPRRRDDDDDEMDAEEDEYD---EQVMDDEIDEEEEEEDDRSSRKRRRSQFIDDVAEEDD 57
MPR RD+DD E+D + + D E+ D+E +EE S RKR RS FIDD AEED
Sbjct: 1 MPRSRDEDD-ELDGDYEALDLEEEEEEDEEEEEERGRGGGGSRRKRGRSNFIDDYAEEDS 59
Query: 58 EEEEEDYDDDEDYGGGGGAARKPKAKRRSGSEFFDLEA-QVDSDEEEDEEEGEDDFIVDG 116
+EE++D +D GG GAA K K+ S S F D EA QVD ++EE+E+E EDDFIVD
Sbjct: 60 QEEDDDDEDYGSSRGGKGAASK--RKKPSASIFLDREAHQVDDEDEEEEDEAEDDFIVDN 117
Query: 117 GAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSSHTEYDEETTDVEQQALL 176
G +LPDE G R RR LPR++ EDVE LERRIQ R++ H EYDEE T+VEQQALL
Sbjct: 118 GTDLPDERGDRRYERR-FLPRDENDEDVEDLERRIQERFSSRHHEEYDEEATEVEQQALL 176
Query: 177 PSVRDPKLWMVKCAIGREREAAVCLMQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAH 236
PSVRDPKLWMVKCAIGRERE AVCLMQK ID+G++LQIRSV+ALDHLKN+IY+EADKEAH
Sbjct: 177 PSVRDPKLWMVKCAIGREREVAVCLMQKFIDRGADLQIRSVVALDHLKNFIYVEADKEAH 236
Query: 237 VKEACKGLRNIYS-QKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVD 295
VKEA KG+RNIY+ QK++LVPIREMTDVL+VESKAIDLSRDTWVRMKIG YKGDLAKVVD
Sbjct: 237 VKEAIKGMRNIYANQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVD 296
Query: 296 VDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRD 355
VDNVRQRVTVKLIPRIDLQALA+KL+GREV+KKK FVPPPRFMN+DEARELHIRVERRRD
Sbjct: 297 VDNVRQRVTVKLIPRIDLQALASKLDGREVSKKKAFVPPPRFMNIDEARELHIRVERRRD 356
Query: 356 PMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLST 415
MTGDYFENIGGMLFKDGF YK VS+KSI+ QN+ PTFDELEKF P ENGE D LST
Sbjct: 357 HMTGDYFENIGGMLFKDGFHYKQVSLKSITVQNVTPTFDELEKFNKPSENGEGDFGGLST 416
Query: 416 LFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCK 475
LFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV IR E+KGLP LAVN +ELCK
Sbjct: 417 LFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVLIRSEVKGLPDPLAVNERELCK 476
Query: 476 YFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITK 535
YFEPGNHVKVVSGT GATGMV+KV+QHVLIILSDTTKE +RVFAD VVESSEVTTG+TK
Sbjct: 477 YFEPGNHVKVVSGTHEGATGMVVKVDQHVLIILSDTTKEHVRVFADHVVESSEVTTGVTK 536
Query: 536 IGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQD 595
IGDYEL DLVLLDN SFGVIIR+E+EAFQVLKGVPDRPEVALVKLREIKCKLEKK NVQD
Sbjct: 537 IGDYELHDLVLLDNLSFGVIIRLENEAFQVLKGVPDRPEVALVKLREIKCKLEKKINVQD 596
Query: 596 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 655
R KN +AVKD VR++EGP KGKQGPV+HIY+G+LFI+DRHHLEHAGFICAK +SC+VVGG
Sbjct: 597 RYKNVIAVKDDVRVIEGPSKGKQGPVKHIYKGVLFIYDRHHLEHAGFICAKCTSCIVVGG 656
Query: 656 SRANGDRN-GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH-----DALVG 709
SR+ +RN GD+ SR+ + + P +P SPGR+ RG + G GG D+L+G
Sbjct: 657 SRSGANRNGGDSLSRYGNFKAPAPVPSSPGRFQRGRGGGYNNSGGRHGGGRGRGDDSLLG 716
Query: 710 TTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYG 769
TTVK+RLGP+KGYRG VV+VKG SVRVELE MK+VTVDR ISDN V +TP+RDT RY
Sbjct: 717 TTVKIRLGPFKGYRGPVVEVKGNSVRVELE--MKIVTVDRGAISDN-VATTPFRDTSRYS 773
Query: 770 MGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNP 829
MGSETPMHPSRTPLHPYMTPMRD+GATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNP
Sbjct: 774 MGSETPMHPSRTPLHPYMTPMRDSGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNP 833
Query: 830 GSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPST 889
GSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGG+YSDAGTPRD S Y NAPSPYLPST
Sbjct: 834 GSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGSYSDAGTPRDHGSAYANAPSPYLPST 893
Query: 890 PGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILV--RRSGEE 947
P GQPMTP+SASYLPGTPGGQPMTPGT GLD MSPVIG D E WFMPDILV ++GE+
Sbjct: 894 P-GQPMTPSSASYLPGTPGGQPMTPGT-GLDVMSPVIGGDAEA-WFMPDILVDIHKAGED 950
Query: 948 SVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKL 1007
+ VGVIR+V DG+C+V LGSSG GDTI ALP+E+EI+PPRK+D++KI+GG +RG+TGKL
Sbjct: 951 TDVGVIRDV-SDGTCKVSLGSSGEGDTIMALPSELEIIPPRKSDRVKIVGGQYRGSTGKL 1009
Query: 1008 IGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 1039
IG+DG+DGIVK+D +LDVKILD+A+LAK QP
Sbjct: 1010 IGIDGSDGIVKIDDNLDVKILDLALLAKFVQP 1041
>sp|O80770|SPT52_ARATH Putative transcription elongation factor SPT5 homolog 2
OS=Arabidopsis thaliana GN=At2g34210 PE=2 SV=2
Length = 989
Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/947 (65%), Positives = 720/947 (76%), Gaps = 76/947 (8%)
Query: 112 FIVDGGAELPDEDGGRGIHRRPLLPR--EDEQEDVEALERR----IQARYARSSHTEYDE 165
FIV G A+LP+ED HRR R +EDV+ LE+R + +YA+ + E D+
Sbjct: 98 FIVSGEADLPNEDSD---HRRQYYQRGFHPHEEDVDELEKRTLERLSTKYAKDDY-ELDD 153
Query: 166 ETTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCIDKGSELQIRSVIALDHLKN 225
DV+QQALLPSVRDPKLW+VKCAIGRERE AVCLMQK +D+GSE +IRS IALDHL+N
Sbjct: 154 -VNDVDQQALLPSVRDPKLWLVKCAIGREREVAVCLMQKIVDRGSEFKIRSAIALDHLQN 212
Query: 226 YIYIEADKEAHVKEACKGLRNIYS-QKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIG 284
Y+YIEAD EAHVKEA KG+RNIY+ QK++LVPI+EMT VL+VESKAIDLSRD+WVRMK+G
Sbjct: 213 YVYIEADMEAHVKEAIKGMRNIYANQKILLVPIKEMTAVLSVESKAIDLSRDSWVRMKLG 272
Query: 285 NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEAR 344
YKGDLA+VVDVDNVR+RVTVKLIPRIDLQALANKLEG E KKK F PPPRFMN+DEAR
Sbjct: 273 IYKGDLAQVVDVDNVRKRVTVKLIPRIDLQALANKLEGTENVKKKAFAPPPRFMNIDEAR 332
Query: 345 ELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGE 404
ELHIRVE RRDPMTGDYFENIGGMLFKDGFLYK VS KSI+AQN+ PTFDELE+F+ P E
Sbjct: 333 ELHIRVEHRRDPMTGDYFENIGGMLFKDGFLYKKVSTKSIAAQNVTPTFDELERFKRPNE 392
Query: 405 NGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPK 464
NGE D STLFANRKKGHFMKGDAVIVIKGDLKNLKGW+EKVDEENV IR EMK LP
Sbjct: 393 NGEIDFVDESTLFANRKKGHFMKGDAVIVIKGDLKNLKGWIEKVDEENVLIRSEMKDLPN 452
Query: 465 TLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVV 524
+AVN +ELCKYFEPGN VKVVSG G TGM++KV+QH+LIILSDTTKE I VFAD V
Sbjct: 453 PIAVNGRELCKYFEPGNFVKVVSGIHEGGTGMIVKVDQHMLIILSDTTKEHICVFADHVA 512
Query: 525 ESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIK 584
+S+EVT G+TKIGDYEL DLV+L + SFGVI++++SEA Q+LKGVPD EV++VK EIK
Sbjct: 513 KSAEVTKGVTKIGDYELHDLVILSDFSFGVILKLDSEAIQILKGVPDSSEVSIVKASEIK 572
Query: 585 CKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFIC 644
K+ KK NVQDR KN VAVKDVVR++EGP KGKQGPV IY+G+LFIHDRH+LEH GFIC
Sbjct: 573 YKIWKKINVQDRYKNVVAVKDVVRVIEGPSKGKQGPVVQIYKGVLFIHDRHNLEHTGFIC 632
Query: 645 AKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSR---GGPPAGGRNRGGR 701
+ SSCV+ GG + +TP +P SP R+ R G P G G
Sbjct: 633 TRCSSCVLAGG----------------NFKTPALVPPSPRRFQRADMGYNPGAGGRHQGG 676
Query: 702 GGH---DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS---DN 755
G D LVGT VK+RLGP+KGY GR+V+VK + VRVELE+ K+VTV+R IS DN
Sbjct: 677 RGRRGDDHLVGTYVKIRLGPFKGYSGRLVEVKDKLVRVELEA--KIVTVERKAISDMTDN 734
Query: 756 VVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYT 815
VV TP+Y MGS+TPMHPSRTPLHP MTPMR +GATPIHDGMRTPMR RAWNPY
Sbjct: 735 VVA------TPQYNMGSQTPMHPSRTPLHPCMTPMRHSGATPIHDGMRTPMRGRAWNPYM 788
Query: 816 PMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGW-ASTPG-GNYSDAGTPRD 873
PMSPPRDNWEDGNPGSWGTSP YEA TPGS W +STPG +Y DAGTP +
Sbjct: 789 PMSPPRDNWEDGNPGSWGTSP-----------YEAATPGSDWGSSTPGRSSYRDAGTPIN 837
Query: 874 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGP 933
++ NAPS PMTP+S SYLP TPGGQ MTPGT LD MS IG D E
Sbjct: 838 NA----NAPS----------PMTPSSTSYLPTTPGGQAMTPGT-DLDVMSLDIGGDAE-T 881
Query: 934 WFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTD 991
F+P IL V ++GE+ GVIR+VLPDGSC V LG G G+TI A N++ +V P+K +
Sbjct: 882 RFIPGILVNVHKAGEDRNPGVIRDVLPDGSCVVALGHRGEGETIRATQNKVSLVCPKKNE 941
Query: 992 KIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 1038
++KI+GG + G+T K+IG DG DGIVK+D SLD+KIL + ILAKL
Sbjct: 942 RVKILGGKYCGSTAKVIGEDGQDGIVKLDESLDIKILKLTILAKLVH 988
>sp|Q5ZI08|SPT5H_CHICK Transcription elongation factor SPT5 OS=Gallus gallus GN=SUPT5H PE=2
SV=1
Length = 1079
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 351/1014 (34%), Positives = 539/1014 (53%), Gaps = 108/1014 (10%)
Query: 100 DEEEDEEEGEDDFIVDGGAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSS 159
++EE E D+ ++D D G R + L R+ +E+ L +YA+SS
Sbjct: 98 EKEEIEASNIDNVVLD-----EDRSGARRLQN---LWRDQREEE---LGEYYMKKYAKSS 146
Query: 160 --HTEY---DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCID---KGSE 211
T Y DE + D+ QQ LLP V+DP LW VKC IG ER A+ LM+K I +
Sbjct: 147 VGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTP 206
Query: 212 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 267
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 207 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQ--MVPIKEMTDVLKVV 264
Query: 268 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 326
+ +L +WVR+K G YK D+A+V V+ + ++++K+IPRID + ++ ++ A
Sbjct: 265 KEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFA 324
Query: 327 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 385
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 325 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 379
Query: 386 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 445
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 380 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 437
Query: 446 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 505
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 438 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 497
Query: 506 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 565
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 498 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 557
Query: 566 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 624
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 558 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 614
Query: 625 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQS 682
+RG F+H + +E+ G K+ V+ GGS+ R+ ++ + PRI P
Sbjct: 615 FRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKP---RDVTNFTVGSFAPMSPRISSPMH 671
Query: 683 PGRYSRGGPPAGGRNRGGRGGHDA-LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 741
P + G GG GRG D L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 672 PSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHST 731
Query: 742 MKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTP 789
+ ++VDR ++ + TP TP YG GS TPM+ S+TPLH
Sbjct: 732 CQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGSRT 791
Query: 790 MRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR--DNWEDG-------NPGSWGTSPQYQ- 839
TP+HDG RTP + AW+P P +P R +++E G +P +G +P Q
Sbjct: 792 PHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQGYGGTPNPQT 851
Query: 840 PGSP-PS-----RAYEAPTPG----------SGWA-STPGGNYSDAGTPRDSSSTYVNAP 882
PG P PS + Y TPG S +A +P G+Y + +P+ S + AP
Sbjct: 852 PGYPDPSSPQVTQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQ---SYHQVAP 908
Query: 883 SP------YLPST--PGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGADNE 931
SP + P++ P PM AS P G PMTPG GG + +P G +
Sbjct: 909 SPVGYQNTHSPASYHPTPSPMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQS 967
Query: 932 GP-WFMPDILVR------RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEI 984
W DI V+ S GVIR V G C V L S +I++ +E
Sbjct: 968 SSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEP 1024
Query: 985 VPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 1038
V P K++K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1025 VTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1078
>sp|O55201|SPT5H_MOUSE Transcription elongation factor SPT5 OS=Mus musculus GN=Supt5h PE=1
SV=1
Length = 1082
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 338/1014 (33%), Positives = 528/1014 (52%), Gaps = 106/1014 (10%)
Query: 100 DEEEDEEEGEDDFIVDGGAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSS 159
++EE E D+ ++D D G R + L R+ +E+ L +YA+SS
Sbjct: 99 EKEEIEASNIDNVVLD-----EDRSGARRLQN---LWRDQREEE---LGEYYMKKYAKSS 147
Query: 160 --HTEY---DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCID---KGSE 211
T Y DE + D+ QQ LLP V+DP LW VKC IG ER A+ LM+K I +
Sbjct: 148 VGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTP 207
Query: 212 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 267
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 208 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 265
Query: 268 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 326
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 266 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 325
Query: 327 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 385
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 326 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 380
Query: 386 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 445
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 381 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 438
Query: 446 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 505
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 439 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 498
Query: 506 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 565
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 499 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 558
Query: 566 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 624
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 559 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 615
Query: 625 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 682
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 616 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 675
Query: 683 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 742
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 676 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 734
Query: 743 KVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPM 790
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 735 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTP 794
Query: 791 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-------- 833
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 795 HYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTP 854
Query: 834 ---------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSS 875
+PQY P +P + A Y AP+P + +P P +
Sbjct: 855 GYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAG 914
Query: 876 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NE 931
++P+ Y P TP PM AS P G PMTPG GG + +P G + N
Sbjct: 915 YQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNS 970
Query: 932 GPWFMPDILVR---RSGEESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 985
W DI V+ + +V GVIR V G C V L S +I++ +E +
Sbjct: 971 SDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPI 1027
Query: 986 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 1038
P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 1028 TPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 1081
>sp|O00267|SPT5H_HUMAN Transcription elongation factor SPT5 OS=Homo sapiens GN=SUPT5H PE=1
SV=1
Length = 1087
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 340/1027 (33%), Positives = 528/1027 (51%), Gaps = 129/1027 (12%)
Query: 100 DEEEDEEEGEDDFIVDGGAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSS 159
++EE E D+ ++D D G R + L R+ +E+ L +YA+SS
Sbjct: 101 EKEEIEASNIDNVVLD-----EDRSGARRLQN---LWRDQREEE---LGEYYMKKYAKSS 149
Query: 160 --HTEY---DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCID---KGSE 211
T Y DE + D+ QQ LLP V+DP LW VKC IG ER A+ LM+K I +
Sbjct: 150 VGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTP 209
Query: 212 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 267
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 268 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 326
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 327 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 385
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 386 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 445
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 446 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 505
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 506 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 565
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 566 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 624
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 625 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 684
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 685 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 730
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 731 GQSVRVELESQMKVVTVDRSMISDNVV-----VSTPYRDTPRYGMGSETPMH--PSRTPL 783
+ RVEL S + ++VDR ++ +++ Y TP Y GS+TPM+ SRTP+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMY--GSQTPMYGSGSRTPM 786
Query: 784 HPYMTPMRD-------AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDG 827
+ TP++D TP+HDG RTP + AW+P P +P R D+
Sbjct: 787 YGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTP 846
Query: 828 NPGSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTP 861
+P ++G +PQY P +P + A Y AP+P + +P
Sbjct: 847 SPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSP 906
Query: 862 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GG 918
P + ++P+ Y P TP PM AS P G PMTPG GG
Sbjct: 907 SPQSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGG 962
Query: 919 LDAMSPVIGAD-NEGPWFMPDILVR---RSGEESVV---GVIREVLPDGSCRVVLGSSGN 971
+ +P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 963 YNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEK 1021
Query: 972 GDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMA 1031
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++
Sbjct: 1022 VVSISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLR 1079
Query: 1032 ILAKLAQ 1038
L KL +
Sbjct: 1080 FLGKLLE 1086
>sp|Q5R405|SPT5H_PONAB Transcription elongation factor SPT5 OS=Pongo abelii GN=SUPT5H PE=2
SV=1
Length = 1083
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 331/982 (33%), Positives = 509/982 (51%), Gaps = 118/982 (12%)
Query: 145 EALERRIQARYARSS--HTEY---DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAV 199
E L +YA+SS T Y DE + D+ QQ LLP V+DP LW VKC IG ER A+
Sbjct: 131 EELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAI 190
Query: 200 CLMQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKV 252
LM+K I + LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+
Sbjct: 191 SLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ- 249
Query: 253 MLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID 312
+VPI+EMTDVL V + +L +WVR+K G YK D+A+V V+ + +++K+IPRID
Sbjct: 250 -MVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRID 308
Query: 313 LQALANKLEGRE-VAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF 370
+ ++ ++ AK+K F PP R + ++ R L V GD+ G
Sbjct: 309 YDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYS 363
Query: 371 KDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDA 430
+ GFL+K+ +M ++ + ++PT ELEKF E + ++ + ST ++ +F GD
Sbjct: 364 RKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTEST--GREREHNFQPGDN 421
Query: 431 VIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ 490
V V +G+L NL+G + VD + I P+ + L L ++EL KYF+ G+HVKV++G
Sbjct: 422 VEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRF 481
Query: 491 AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN 550
G TG++++VE++ +I+ SD T +++V D+ SE +G+ G +E +LV LD
Sbjct: 482 EGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQ 541
Query: 551 SFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRI 609
+ GVI+R+E E FQVL +V V+ + + K + + V D +N + VKD+V++
Sbjct: 542 TVGVIVRLERETFQVLNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKV 598
Query: 610 VEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR 669
++GP G++G + H++R F+H + +E+ G K+ V+ GGS+ D
Sbjct: 599 IDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPR-DVTNFTVGG 657
Query: 670 FNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVR 715
F P SP S P AGG+ G + L+G TV++
Sbjct: 658 F--------APMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRIS 709
Query: 716 LGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVV-----VSTPYRDTPRYGM 770
GPYKGY G V D + RVEL S + ++VDR ++ +++ Y TP Y
Sbjct: 710 QGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMY-- 767
Query: 771 GSETPMH--PSRTPLHPYMTPMRD-------AGATPIHDGMRTPMRDRAWNPYTPMSPPR 821
GS+TPM+ SRTP++ TP++D TP+HDG RTP + AW+P P +P R
Sbjct: 768 GSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSR 827
Query: 822 ---------DNWEDGNPGSWG-----------------TSPQYQPGSPPSRA-------- 847
D+ +P ++G +PQY P +P + A
Sbjct: 828 AEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFS 887
Query: 848 -YEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGT 906
Y AP+P + +P P + ++P+ Y P TP PM AS P
Sbjct: 888 PYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSP 943
Query: 907 PGGQPMTPGT---GGLDAMSPVIGAD-NEGPWFMPDILVR---RSGEESVV---GVIREV 956
G PMTPG GG + +P G + N W DI V+ + VV GVIR V
Sbjct: 944 VGYSPMTPGAPSPGGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSV 1003
Query: 957 LPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGI 1016
G C V L S +I++ +E + P K +K+K++ G R ATG L+ +DG DGI
Sbjct: 1004 T-GGMCSVYLKDSEKVVSISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGI 1060
Query: 1017 VKVDVSLDVKILDMAILAKLAQ 1038
V++D +KIL++ L KL +
Sbjct: 1061 VRMDPDEQLKILNLRFLGKLLE 1082
>sp|Q9DDT5|SPT5H_DANRE Transcription elongation factor SPT5 OS=Danio rerio GN=supt5h PE=1
SV=1
Length = 1084
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 331/974 (33%), Positives = 505/974 (51%), Gaps = 107/974 (10%)
Query: 145 EALERRIQARYARSSHTEY-----DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAV 199
EAL +YA+SS E+ ++ + D+ QQ LLP V+DP LW VKC IG ER A+
Sbjct: 134 EALGEYYMRKYAKSSGGEHFYGGSEDLSDDITQQQLLPGVKDPNLWTVKCKIGEERATAI 193
Query: 200 CLMQK-----CIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQ 250
LM+K C D + LQI+SV+A +H+K YIY+EA K+ HVK A +G+ N+ ++Q
Sbjct: 194 SLMRKFVAYQCTD--TPLQIKSVVAPEHVKGYIYVEAYKQTHVKAAIEGVGNLRMGFWNQ 251
Query: 251 KVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPR 310
+ +VPI+EMTDVL V + +L +WVR+K G YK D+A+V V+ + +++K+IPR
Sbjct: 252 Q--MVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQNTISLKMIPR 309
Query: 311 IDLQALANKLEGRE-VAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGM 368
IDL + ++ ++ AK+K F PP R + ++ R L V GD+
Sbjct: 310 IDLDRIKARMSMKDWFAKRKKFKRPPQRLFDAEKIRSLGGEVSH-----DGDFMIFEANR 364
Query: 369 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKG 428
+ GFL+K+ +M ++ + ++PT ELEKF E + ++ + +T ++ + G
Sbjct: 365 YSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTETT--GKEREHNLQAG 422
Query: 429 DAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSG 488
D V V +G+L NL+G + VD + I P+ + L L + EL KYF G+HVKV++G
Sbjct: 423 DNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKVIAG 482
Query: 489 TQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLD 548
G TG++++VE++ +I+ SD T +++V D+ SE +G+ G +E +LV LD
Sbjct: 483 RYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQLD 542
Query: 549 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVV 607
+ GVI+R+E E FQVL +V V+ + + + + + V D +N + VKD+V
Sbjct: 543 PQTVGVIVRLERETFQVLNM---HGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVKDIV 599
Query: 608 RIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAY 667
++++GP G++G + HI+RG F+H + +E+ G K+ V+ GGS+ R+ +
Sbjct: 600 KVIDGPHSGREGEIRHIFRGFAFLHCKKLVENGGMFVCKARHLVLAGGSKP---RDVTNF 656
Query: 668 SRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH--------DALVGTTVKVRLGPY 719
+ PRI SP GG P G GG GG + L+G TV++ GPY
Sbjct: 657 TVGGFAPMSPRI-SSPMHPGGGGQPQRGGGGGGGGGMGRGRGRRDNDLIGQTVRISQGPY 715
Query: 720 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPR 767
KGY G V D + RVEL S + ++VDR ++ + + TP TP
Sbjct: 716 KGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGGKERQGRSSTHLRTPMYGSQTPI 775
Query: 768 YGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSP--PRDNWE 825
YG GS TPM+ S+TPLH TP+HDG RTP + AW+P P +P P D +E
Sbjct: 776 YGTGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRPDDEYE 835
Query: 826 DG----------------NPGSWG--------TSPQYQPGSPPSRA---------YEAPT 852
NP + G +PQY P +P + A Y AP+
Sbjct: 836 FAYDDEPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYAAPS 895
Query: 853 PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPM 912
P + +P P ++P+ Y P TP PM AS P G PM
Sbjct: 896 PQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHP-TP--SPMA-YQASPSPSPVGYSPM 951
Query: 913 TPGT---GGLDAMSPVIGADN-EGPWFMPDILVR------RSGEESVVGVIREVLPDGSC 962
TPG GG + +P D W DI+VR G + G+IR V G C
Sbjct: 952 TPGAPSPGGYNPHTPGSNIDQASNDWVTTDIMVRVKDTFLDGGVINQTGIIRSVT-GGMC 1010
Query: 963 RVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS 1022
V L + +I++ +E V P K +K+K++ G R ATG L+ +DG DGIV++++
Sbjct: 1011 SVFLQDTEKVVSISS--EHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMELD 1068
Query: 1023 LDVKILDMAILAKL 1036
+KIL++ L KL
Sbjct: 1069 EQLKILNLRFLGKL 1082
>sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5 OS=Drosophila melanogaster
GN=Spt5 PE=1 SV=1
Length = 1078
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 306/963 (31%), Positives = 476/963 (49%), Gaps = 100/963 (10%)
Query: 129 IHRRPLLPREDEQEDVEALERRIQARYARSSHTEY------DEETTDVEQQALLPSVRDP 182
I RR + ++ED +E ++ +YA S + +E + ++ QQ LLP ++DP
Sbjct: 157 IRRRGTNLWDTQKED--EIEEYLRKKYADESIAKRHFGDGGEEMSDEITQQTLLPGIKDP 214
Query: 183 KLWMVKCAIGREREAAVCLMQKCI---DKGSELQIRSVIALDHLKNYIYIEADKEAHVKE 239
LWMVKC IG E+ A+ LM+K + + LQI+S+IA + +K YIY+EA K+ HVK
Sbjct: 215 NLWMVKCRIGEEKATALLLMRKYLTYLNTDDPLQIKSIIAPEGVKGYIYLEAYKQTHVKT 274
Query: 240 ACKGLRNIY--SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVD 297
+ N+ K +VPI+EMTDVL V + + L WVR+K G YK D+A+V VD
Sbjct: 275 CIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKEQVGLKVKQWVRLKRGLYKDDIAQVDYVD 334
Query: 298 NVRQRVTVKLIPRIDLQALANKL-----EGREVAKKKPFVPPPRFMNVDEARELHIRVER 352
+ +V +KL+PRID + L E + +KK P + + + R + V
Sbjct: 335 LAQNQVHLKLLPRIDYTRMRGALRTTATESDDSKRKKKRRPAAKPFDPEAVRAIGGEVHS 394
Query: 353 RRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIAS 412
GD+ G + GFLYK +M +I + ++PT ELE+F E E ++
Sbjct: 395 -----DGDFLLFEGNRYSRKGFLYKNFTMSAILSDGVKPTLAELERFEESPE--EVNLEI 447
Query: 413 LSTLFANRKKGH-FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSK 471
+ T+ + H F GD V V GDL+NL+ + +D + + P+ + L L +
Sbjct: 448 MGTVKDDPTMAHSFSMGDNVEVCVGDLENLQAKIVAIDGTMITVMPKHQDLKDPLIFKAS 507
Query: 472 ELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTT 531
EL KYF+ G+H +V++G G TG++++VE ++++SD T ++ V D+ S+V T
Sbjct: 508 ELRKYFKTGDHARVLAGRYEGETGLIIRVEPTRVVLVSDLTNHELEVLPRDLQLCSDVAT 567
Query: 532 GITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL----KGVPDRPEVALVKLREIKCKL 587
G+ +G ++ D+V LD+ + GVI+R+E E F VL K + +P AL K +E
Sbjct: 568 GVDCLGQFQWGDMVQLDSQNVGVIVRLERENFHVLGMNGKCIECKP-TALHKRKE----- 621
Query: 588 EKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKS 647
+ + D ++N + +DVV+++EGP G+ G ++H+YR + F+H R + E+ G K+
Sbjct: 622 NRHTVALDADQNQIRRRDVVKVMEGPHAGRSGEIKHLYRSLAFLHCRMYTENGGIFVCKT 681
Query: 648 SSCVVVGGSRANGDRNGDAYSR-FNSLRTPPRI--PQSPGRYSRGGPPAGGRNRGGRGGH 704
+ GGS+ G F S PRI P P A G G R
Sbjct: 682 RHLQLAGGSKTTVSNAGIVGGLGFMS----PRIQSPMHPSGGRGARGGARGGRGGFRVTR 737
Query: 705 D-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVV------ 757
D ++G T+K+ GPYKG G V D + RVEL + + ++VDR+ I+ V
Sbjct: 738 DREILGKTIKISGGPYKGAVGIVKDATESTARVELHTSCQTISVDRNHIAIVGVTGKEGS 797
Query: 758 VSTPYRDTPRY-GMGSETPMHP---SRTPLHPYMTPMRDAGA-------TPIHDGMRTPM 806
VST R R G G++TP + S+TPL TP D TP HDG TP
Sbjct: 798 VSTYGRTPARTPGYGAQTPSYTAAGSKTPLVGSQTPNWDTDTRTPYGTMTPSHDGSMTP- 856
Query: 807 RDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGG 863
R AW+P +P R+N D + SP Y P +P + + TPG+ + S
Sbjct: 857 RHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPGYQMTSQFAPQTPGTLYGSDRSY 916
Query: 864 NYSDAGTPRDSSST---YVNAPSP--YLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGG 918
+ + S Y+N PSP Y P+TPGG P +P Y P TPG
Sbjct: 917 SPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTPGGIPQSP----YNPQTPGAS-------- 964
Query: 919 LDAMSPVIGADNEGPWFMPDILVRRSGEESV-----VGVIREVLPDGSCRVVLGSSGNGD 973
LD+ + G W DI VR + G+IR V +G C V L
Sbjct: 965 LDS--------SMGDWCTTDIEVRIHTHDDTDLVGQTGIIRTV-SNGVCSVFLRQEDR-- 1013
Query: 974 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 1033
+++ + + V P D+ KI+ G R + G+++ DG + +++ ++K+L + L
Sbjct: 1014 SVSIVSEHLAPVLPCNGDEFKIIYGDDRESVGRVLSKDGDVFVCRINE--EIKLLPINFL 1071
Query: 1034 AKL 1036
K+
Sbjct: 1072 CKM 1074
>sp|Q21338|SPT5H_CAEEL Transcription elongation factor SPT5 OS=Caenorhabditis elegans
GN=spt-5 PE=3 SV=3
Length = 1208
Score = 324 bits (831), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 261/819 (31%), Positives = 405/819 (49%), Gaps = 107/819 (13%)
Query: 161 TEYDEETT---DVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCI---DKGSELQI 214
++YD+E + D+ + + LPS +DP LW+VKC +G E+ A+ LM+KC+ QI
Sbjct: 159 SQYDDEDSAMDDISKNSHLPSTKDPNLWIVKCRMGEEKLVAMHLMRKCLAVEHTNEPFQI 218
Query: 215 RSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDLS 274
+SV+ + LK IYIEA K++HV A +G + + +VPI++M DVL V L
Sbjct: 219 KSVVVKEGLKGMIYIEAFKQSHVMSAIEGFSALNQFTITMVPIKDMVDVLRVVKDIPQLK 278
Query: 275 RDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ----ALANKLEGREVAKKKP 330
++VR+K YK DLA V VD + RV +KLIPR+D Q A+ + K++P
Sbjct: 279 LGSYVRLKRTMYKDDLAVVDLVDIAQNRVNLKLIPRVDYQKRRGAMRTDADKNYKLKRRP 338
Query: 331 FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQ 390
P+ + D +E+ + +T F G F+ GFLYK + +I A ++
Sbjct: 339 M---PKLFDQDTIKEVGGEI------VTDGDFLVFEGNHFRRGFLYKYFPINAIQADGVK 389
Query: 391 PTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDE 450
PT ELEKF+ E+ + L T + F+ GD V V G+L NL+G V VD
Sbjct: 390 PTLGELEKFQ---ESSDDLKRELETASLKDTENPFVPGDIVEVKAGELVNLRGKVMTVDG 446
Query: 451 ENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSD 510
V + P+ + L + + +N+ EL KYF+ G+H KV+SG G TG++++V+ I+LSD
Sbjct: 447 TKVVMMPDQEDLKEAITLNAHELRKYFKEGDHAKVISGRYEGHTGLIVRVKDSTAIVLSD 506
Query: 511 TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN-SFGVIIRVESEAFQVLK-- 567
E+++V D+ ++VTTG+ +G ++ DLV LD+ + GVI+R+E E +VL
Sbjct: 507 LGMEELKVRVRDLQLCADVTTGVDSLGQFQYHDLVQLDHTGNVGVIVRLEKEHLEVLNMH 566
Query: 568 GVPDRPEVALVKLREIKCKLEKK-SNVQDRNKNTVAVKDVVRIVEGPCKGKQ-------G 619
GV +R +K + I K + + + V D N++ KD+V+++ GP ++ G
Sbjct: 567 GVVNR-----IKPQAIIAKKDVRFAKVLDSQNNSIEAKDLVKVIGGPNAKERETDEDPVG 621
Query: 620 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN--------GDRNGDAYSRFN 671
V + +RG +F++ R ++ G + K ++ G + N A R +
Sbjct: 622 EVLYAFRGTVFVYSRKVTKNGGVLVCKPKQLILQGAKKTTSTPMVSRMASPNPMASPRHS 681
Query: 672 SLRTPPRIPQ--------------SPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 717
S PR PQ G G G N+ L+G V++ G
Sbjct: 682 SGGMTPRSPQDGMSSRGSSGGQTPRQGGGGGRGGHFGTANQQKVRRDLTLIGKNVRIIKG 741
Query: 718 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS---MISDNVVVS-------------TP 761
P KG+ G V D +VRVEL +Q + ++VDR+ ++ D + + TP
Sbjct: 742 PMKGHFGIVRDATEDTVRVELHTQCRTISVDRARVMVVGDTGITAGSGGGSSFYSSSKTP 801
Query: 762 YRD---TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIH-DGMRTPMRDRAWNPYTPM 817
RD TP Y GS+TPM+ ++TP++ MTP D G TP + +G RTP A+ TP
Sbjct: 802 MRDSGKTPMY--GSKTPMYGAQTPMYGSMTPAYDGGRTPAYGEGGRTP----AYGSKTPA 855
Query: 818 SPPRDNWEDGNPGSWGTSPQYQPGSPPSRAY----EAPTPGSGWASTPGGNYSDAGTPRD 873
+ D + S +P Y S + AY A TP G ST GG G+ +
Sbjct: 856 ------YGDLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYG--STEGGRTPAYGSMDN 907
Query: 874 SSSTYVNAPSPYLPSTPGGQPM---TPN--SASYLPGTP 907
S + + TPG + M TPN S+S P P
Sbjct: 908 SRTPAYDDSG----RTPGYESMPSRTPNYDSSSKTPAYP 942
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 147/343 (42%), Gaps = 86/343 (25%)
Query: 765 TPRYGM--GSETPMHPS----RTPLHPYMTPMR-----DAGATPIHDGM--RTPMRDRAW 811
TP YG G+ TP + S RTP + M R D+G TP ++ M RTP D +
Sbjct: 877 TPAYGSADGARTPAYGSTEGGRTPAYGSMDNSRTPAYDDSGRTPGYESMPSRTPNYDSSS 936
Query: 812 NPYTPMSPPRDNWED----GNPGSWGTSPQYQPGSP------PSR--AYEAPTPGSGWAS 859
TP P ++ N SP Y+P +P P+R A+ + TPG
Sbjct: 937 K--TPAYPESEHSARTPAYNNDYDIPLSPAYEPDAPEAYDNAPARTPAFVSRTPGYDTYE 994
Query: 860 TPGGNYS-DAGTPRD------SSSTYVNAPSPYLPSTPGG--QPMTPNSASYLPGTPG-G 909
Y DA T + SS TY + P Y+ TPG P TP +Y TPG
Sbjct: 995 NSSPTYEPDAATKVEEDIGDTSSPTYDSPPHSYVVPTPGAMLNPATP--GAYHVDTPGFA 1052
Query: 910 QPMTPGTGG----LDAMSPVIGADN-------------------EGPWFMPDILV----- 941
PMTPG+GG A SP G D+ +G W + ++ V
Sbjct: 1053 APMTPGSGGAYDQYVAPSPFAGYDSNNYNNADGAIEQIPDHFLAQGVWIVQNLCVQIKDH 1112
Query: 942 --RRSGEESVV-----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIK 994
R +G E+++ G + +PD C + + + D +T + P+ D +
Sbjct: 1113 EGRFNGREAIIKDVTDGKVDVYMPDHKCNLEV----DFDQLTPM-------KPQPGDDAR 1161
Query: 995 IMGGPHRGATGKLIGVDGTDGIVKVDVSL-DVKILDMAILAKL 1036
++ G G +G+L+ +DG + +++ + D++++++ + K+
Sbjct: 1162 VIFGQDAGHSGQLVSMDGFEAVIRSQEDMSDMRVINIGLCCKM 1204
>sp|Q4PIC4|SPT5_USTMA Transcription elongation factor SPT5 OS=Ustilago maydis (strain 521
/ FGSC 9021) GN=SPT5 PE=3 SV=1
Length = 1057
Score = 301 bits (772), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 203/644 (31%), Positives = 335/644 (52%), Gaps = 51/644 (7%)
Query: 137 REDEQEDVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWMVKCAIGRERE 196
R++E + EAL ++ RY RS+ + +V Q+ L+PSV DP LW V C GRER+
Sbjct: 260 RQEEDTNAEALAEELRQRYGRSARYAAQSDYAEVPQRLLMPSVEDPSLWGVPCKPGRERD 319
Query: 197 AAVCLMQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK-- 251
+ L++K + + S ++I S D + +Y+EA + V +AC GL Y+++
Sbjct: 320 IVMTLVRKAMAENFTSSPMRIISAFCRDSIPGRVYVEARRADDVVKACNGLAGAYARQTT 379
Query: 252 -VMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPR 310
+ L+PI EM D+L ++ ++ WVR+K G Y GDLA+V+DV + V +K+IPR
Sbjct: 380 SLHLIPISEMADLLKLQKVQNEIQVGGWVRIKRGKYAGDLAQVLDVSENGEEVGLKMIPR 439
Query: 311 IDLQALANKLEGREVAKKK-----------PFVPPPRFMNVDEARELHIR-VERRRDPMT 358
IDL + L + +K+ F PP RF N +E ++ + R +R
Sbjct: 440 IDLNPKDSGLYTDSLGRKRKKGAGSSATTVAFRPPQRFFNPEEVQKAYPRDTPTKRGSQW 499
Query: 359 GDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGEN---------GESD 409
F+N ++DG+L K V + I +N+ PT DE+ KF GE+ G D
Sbjct: 500 --VFQNDS---YRDGYLEKDVRVTGIITENVNPTLDEITKF--AGESSIEDGINKLGAVD 552
Query: 410 IASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAV 468
++ ++ + D V + +G+ + G V+ ++ E + I+ E + L + + V
Sbjct: 553 LSLIADASKKATEALIQPKDQVEIFEGEQAGVYGTVKAINNEVITIQLEHEDLMDQIVEV 612
Query: 469 NSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSE 528
++ + K F+PG+H+KV+SG A TG+V+KVE +V LSD + +++ VF+ D+ +++E
Sbjct: 613 PARSVRKRFKPGDHIKVMSGKHADETGLVVKVEDNVTTFLSDLSMQEVSVFSKDIRQAAE 672
Query: 529 VTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE 588
V +G+ I YEL +LV LD + G+I +E E+F+VL +V VK +I K +
Sbjct: 673 VGSGVNVISGYELHNLVQLDAQTVGIIFNIERESFKVLD---QTGQVVTVKPHQISTKKD 729
Query: 589 -KKSNVQDRNKNTVAVKDVVRIVEGP-CKGKQGPVEHIYRG-ILFIHDRHHLEHAGFICA 645
++ D + N + D+V+ V GP + +QG V HIY+ ++F+H+R + E+ G A
Sbjct: 730 TSRAFALDHDGNEIRAGDMVKEVAGPFSRLRQGQVLHIYQSMVVFLHNREYTENGGVFIA 789
Query: 646 KSSSC--VVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGG 703
++ S + ++G S+ N P + G + G R GGR
Sbjct: 790 RARSLEPLAPKSVSTKTKKDGGDLSKMN-----PALSNLSGGGANDVRVEGVRRFGGRDM 844
Query: 704 HDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTV 747
H G V + GPYK YRGR+ + G R+EL S K +TV
Sbjct: 845 HK---GKNVAIIKGPYKTYRGRITETTGNMARIELTSVSKPITV 885
>sp|O13936|SPT5_SCHPO Transcription elongation factor spt5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spt5 PE=1 SV=1
Length = 990
Score = 290 bits (741), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 255/846 (30%), Positives = 396/846 (46%), Gaps = 112/846 (13%)
Query: 130 HRRPLLPREDEQE-DVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWMVK 188
HR R++ Q D E L + +Y RS D T++V Q+ LLPSV DP +W V+
Sbjct: 189 HRELDRQRQELQSVDAERLAEEYREKYGRSQTVVGD--TSNVPQRLLLPSVNDPNIWAVR 246
Query: 189 CAIGREREAAVCLMQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLR 245
C IG+E++ +M+K +D S L+I S D L YIY+EA K++HV +A G+
Sbjct: 247 CKIGKEKDIVFTIMRKAMDLQYTSSPLEIISAFQRDSLVGYIYVEARKQSHVLDALNGVL 306
Query: 246 NIYSQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTV 305
N+Y+ ++LVPI+EM D+L V+ + ++L +VR++ G Y GDLA+V ++ V
Sbjct: 307 NVYTNNMILVPIKEMPDLLKVQKQVVELLPGAYVRIRRGKYAGDLAQVDNLSENGLTARV 366
Query: 306 KLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENI 365
+++PRID ++ L+ + A + P R N EA + + +R P F N
Sbjct: 367 RIVPRID---YSDGLKRKNSATR----PQARLFNESEAFKSNPSKFSKRGPRLF-LFNN- 417
Query: 366 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH- 424
F+DGFL K + + S+ + + PT DE+ KF N ++ LS+L + K GH
Sbjct: 418 --EEFEDGFLVKDIRISSLITEGVNPTLDEVSKF-----NPNNEDLDLSSLALSVKGGHA 470
Query: 425 -FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHV 483
F GD V V G+ + G VE V +V GL L V S+ L K F G++V
Sbjct: 471 EFQPGDHVEVYVGEQTGVSGVVENV-RGSVITMVSSDGL--RLDVPSRGLRKRFRHGDYV 527
Query: 484 KVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRD 543
KV++G TGMV+++ + + LSDT ++ VF+ D+ E+S + YEL D
Sbjct: 528 KVIAGKYKDDTGMVVRISKDEVTFLSDTLMTELTVFSRDLGEASSAQAVNSA---YELHD 584
Query: 544 LVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVA 602
LV LD N+ I V+ + ++V+ V V +I + + V DRN +
Sbjct: 585 LVQLDVNTVACIFSVDRDTYKVID---QNGGVRTVLASQITMRHSNRRGVATDRNGAEIR 641
Query: 603 VKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 662
+ D V+ V G +GKQG + HIYR +F+H+R E+ G A+S + + A G R
Sbjct: 642 IGDKVKEVGG--EGKQGTILHIYRAFVFLHNRDIAENNGVFSARSRNVATIA---AKGAR 696
Query: 663 NGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGY 722
++ N P + P PP R G D +G TV++R GP KG
Sbjct: 697 ISADLTKMN-----PALSNGPAL-----PPVANLKR--TIGRDKAIGATVRIRRGPMKGL 744
Query: 723 RGRVVDVKGQSVRVELESQMKVVTVDRSMI-----SDNVVVSTPYR-------------- 763
G + D + RVEL + K+VT+ + + + ++ T +
Sbjct: 745 LGVIKDTTDANARVELHTGNKMVTIPKENLLYTTKTGELISYTEFIERSRGIRPGSISTA 804
Query: 764 ---DTPRYGMGSETP--MHPSRTPLHPY--MTPMRDAGA-TPI-HDGMRTPMRDR----- 809
+ P + G+ TP + SRTP TP ++G+ TP + G RTP +
Sbjct: 805 DGPNVPNWAQGARTPAVANGSRTPAWNTGSRTPAWNSGSKTPAWNSGSRTPAWNSGNKTP 864
Query: 810 AWN-----PYTPMSPPRDNWEDGNPG-SWGT---SPQYQPG-----------SPPSRAYE 849
AWN P W GN +W + +P + G +P A +
Sbjct: 865 AWNAGSRTPAWNSGNKTPAWNVGNKTPAWNSGAKTPAWNAGNKTPSWNNGTKTPAWNANQ 924
Query: 850 APTPGSG----WASTPG-GNYSDAGTPRDSSSTYVNAPSP--YLPSTPGGQ-PMTPNSAS 901
P +G W TP G +S+ + +S AP+P + TPGG +S
Sbjct: 925 TPMVANGTNTSWGQTPAYGGFSETNWDTEDNSKPYTAPTPGAWAAPTPGGWDDEEGDSPK 984
Query: 902 YLPGTP 907
Y+P +P
Sbjct: 985 YVPPSP 990
>sp|Q4WP96|SPT5_ASPFU Transcription elongation factor spt5 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=spt5
PE=3 SV=1
Length = 1058
Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 254/851 (29%), Positives = 411/851 (48%), Gaps = 86/851 (10%)
Query: 130 HRRPLLPREDEQE---DVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWM 186
HR+ L R+ E E D E + ++ RY R+ D V ++ LLPSV DP +W
Sbjct: 190 HRQ--LDRQRELEASMDAEKQAQLLKERYGRNRAAATDAVV--VPKRLLLPSVDDPSIWG 245
Query: 187 VKCAIGREREAAVCLMQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHVKEAC 241
V+C G+ERE + ++ ++ GS IR + A + + YIY+EA ++A V EA
Sbjct: 246 VRCKAGKEREVVFAIQKRIEERPPGSRKPIRIISAFERGGAMSGYIYVEARRQADVMEAL 305
Query: 242 KGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVR 300
+ + N+Y + K++LVP+REM D+L V+ K+ +L+ WVR+K G Y+GDLA++ +VD
Sbjct: 306 EDMSNVYPRTKMILVPVREMPDLLRVQ-KSEELNPGGWVRIKRGKYQGDLAQIEEVDTNG 364
Query: 301 QRVTVKLIPRIDLQALANKLEGR---EVAKKKPFV------PPPRFMNVDEARELHIRVE 351
VTV+L+PR+D N+ G ++ +K+P + PP R + EA++ H +
Sbjct: 365 LDVTVRLVPRLDYGL--NEDSGAPVVDIKRKRPGMASGGPRPPQRLFSEAEAKKRHGKYL 422
Query: 352 RRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--D 409
+ G + +G + DGFL K + ++ + +N+ P +E+ F ++G S D
Sbjct: 423 SATSGLGGKSWSYLG-ETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARGSDDGTSNLD 481
Query: 410 IASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKT 465
+ASL+ TL + + ++ GD V V +G+ + L G + V ++ E+ G +
Sbjct: 482 LASLAETLKNSTAEESYLPGDPVEVFRGEQQGLVGRTTSTRGDIVTLQVTEGELAG--QM 539
Query: 466 LAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVV 524
+ K L K F G+HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+
Sbjct: 540 IEAPVKSLRKRFREGDHVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLR 599
Query: 525 ESSEVTTGI-TKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREI 583
S+E TG+ K+G +++ DLV LD ++ +++V+ E+ +VL + V +I
Sbjct: 600 LSAE--TGVDGKLGMFDVHDLVQLDASTVACVVKVDRESLRVLD---QNGSIRTVLPSQI 654
Query: 584 KCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAG 641
K+ + + DRN + + D VR + G + G + HIYR LF+H++ E++G
Sbjct: 655 ANKITPRRDAVATDRNGAEIRIGDTVRELYG--DQRSGVILHIYRSFLFLHNKAQAENSG 712
Query: 642 FICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGR 701
+ ++++ V V S G G ++ N IP + GPP
Sbjct: 713 IVVVRTTNVVTV--SAKGGRSTGPDLTKMNPALMRSGIPGA-----SMGPPKSF------ 759
Query: 702 GGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTP 761
GHD L+G TV+VR GPYKG G V D RVEL S+ K+VT+ + ++ V+
Sbjct: 760 -GHDRLIGKTVQVRKGPYKGLVGIVKDSTDVQARVELHSRNKLVTIPKDVLIVKDPVTGQ 818
Query: 762 YRDTPRYGMGSETPMHPSRTPLHPYM---TPM--RDAGATPIHDG---MRTPM------- 806
D R G G P S P + TPM D+ TP G RTP
Sbjct: 819 TLDMSRKG-GQRVPYGASAAPPSGWSGGRTPMAAADSSRTPAWGGASSARTPAWAGISGS 877
Query: 807 RDRAWN-PYTPMSPPRDNWEDGNPGSWGTSPQYQPGS-------PPSRAYEAPTPGS--- 855
R AW + S P D G+ +P + G+ S ++A GS
Sbjct: 878 RTPAWKMDGSRTSNPYDGSRTAYGGAGSRTPAWNAGARTPYDSGSGSSGFDAFAAGSRTP 937
Query: 856 GWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 915
W G + A + S+ + Y PGG P +Y TPG TPG
Sbjct: 938 AWGGANAGGRTPAWSASSSAGSGNRDSRGYDAPNPGGAYSAPTPGAYTAPTPGASAPTPG 997
Query: 916 TGGLDAMSPVI 926
A +P +
Sbjct: 998 AWADSAPTPGV 1008
>sp|P0CR70|SPT5_CRYNJ Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SPT5 PE=3 SV=1
Length = 1152
Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 254/892 (28%), Positives = 409/892 (45%), Gaps = 118/892 (13%)
Query: 119 ELPDEDGGRGIHRRPLLPR---EDEQEDVEALERRIQARYARSSHTEYDEETTDVEQQAL 175
E P++ G R H+ L R +E+EDV + +R++ R+A ++ Y+ ++ V Q+ L
Sbjct: 140 EAPEDVGARDDHQHRRLNRVFGRNEEEDVHDIVQRLKERHAGAAR--YNGDSDAVPQRLL 197
Query: 176 LPSVRDPKLWMVKCAIGREREAAVCLMQKCIDK---GSELQIRSVIALDHLKNYIYIEAD 232
+P V DP LW V GRE + +K + + + + SV D + I+IEA
Sbjct: 198 MPGVNDPSLWKVVVKSGREHAICASIFRKVFAQQYSANPIDVISVFCRDSIPGMIFIEAR 257
Query: 233 KEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLA 291
+ A V A G+ I+ S+ V LVPI EM +L ++ K ++L+ WVRMK G + GDLA
Sbjct: 258 QSASVSAAVNGIVGIFMSRGVNLVPIEEMAPLLKMKKKDVNLTPGMWVRMKRGKHAGDLA 317
Query: 292 KVVDVDNVRQRVT-VKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRV 350
+VVDVD + V +K IPRIDL + E + K PP R D+ R+++ R
Sbjct: 318 QVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPGGVRPPARLFAYDDVRKIYGRQ 377
Query: 351 ERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGEN-GESD 409
R+ F+N + DGF K V + +++ +++ PT +E+ +F ++ + D
Sbjct: 378 SVRQGAQGSYLFDND---EYVDGFCIKDVKIPAVATEDVNPTLEEISRFTGDDDSTAKFD 434
Query: 410 IASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAV 468
+++++ N GD + V +G+ L G VE V + + I+ E + +T+ V
Sbjct: 435 LSAIADANKNLSTSLLFPGDKIEVYEGEQTGLYGIVEAVSPDVIAIKAEGGEVHGQTVEV 494
Query: 469 NSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSE 528
++ + K F+ G HVKV+ G A+GMV++V+ ++ ++SD +++I+VF+ D+ ++++
Sbjct: 495 PARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTLMSDLGEQEIKVFSKDLRKAAD 554
Query: 529 VTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE 588
T G Y++ D+V+LD+ + GV+ +VE ++L V ++ + +
Sbjct: 555 TTNLTVTKGLYDVHDMVMLDSTTAGVVTKVEGGLLRILD---QNGAAKSVSPEQVSIRRD 611
Query: 589 KK--SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICA 645
K + D N + V D ++ +G +QG V +I+R I F+++R + ++ G A
Sbjct: 612 NKRFAVATDSQGNDMKVGDNMKETDGEM--RQGEVFNIFRSIFVFLYNREYTDNFGVFVA 669
Query: 646 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP-GRYSRGGPPAGGRNRGGRGGH 704
+++S + V A D ++ N P Q P G S P NR
Sbjct: 670 RANSLISVTPKSAVND-----LTKIN----PALNQQLPYGGASLMPAPTANLNR------ 714
Query: 705 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDN--------- 755
+ L+ T V V G KG G + DV+G++ RVEL+ K ++V+ + +
Sbjct: 715 NRLINTLVVVTKGTSKGLIGVIKDVQGENARVELKHNNKTLSVNLASLKRKDQKTGATFP 774
Query: 756 ------VVVSTPYRDTPRYGM------GSETPMHPSRTPLHPYM----TPMRDAGATP-- 797
+ Y P G G T MHPS P + TP G TP
Sbjct: 775 LEMAGIASAAGGYGARPNAGQYDINPYGGATAMHPSMGGQTPALMGGRTPAARFGQTPNP 834
Query: 798 ----IHDGMRTPMRDRAWNPYTP----MSPPRDNWEDGNPGSWGTS----PQY------- 838
+ +G +TP NPY +P N G +WG S P Y
Sbjct: 835 YAAGVQNG-KTP------NPYAAGVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGK 887
Query: 839 ------QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSS-TYVNAP------SPY 885
Q G P+ AY PG TP Y G P S S V AP +PY
Sbjct: 888 TPAYGMQGGKTPN-AYAMAPPGPSGGRTPA--YGAYGRPEASGSRPSVMAPPSAPYSAPY 944
Query: 886 LPSTPGGQ----PMTPNSASYLPGTPGGQPM-----TPGTGGLDAMSPVIGA 928
TP G P P + P TP G P TPG L A +P GA
Sbjct: 945 SAPTPAGNGAPTPAIPGNPYTAP-TPYGAPTPYAAPTPGMPSLSAPTPGPGA 995
>sp|P0CR71|SPT5_CRYNB Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=SPT5 PE=3
SV=1
Length = 1152
Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 255/892 (28%), Positives = 409/892 (45%), Gaps = 118/892 (13%)
Query: 119 ELPDEDGGRGIHRRPLLPR---EDEQEDVEALERRIQARYARSSHTEYDEETTDVEQQAL 175
E P++ G R H+ L R +E+EDV + +R++ R+A ++ Y+ ++ V Q+ L
Sbjct: 140 EAPEDVGARDDHQHRRLNRVFGRNEEEDVHDIVQRLKERHAGAAR--YNGDSDAVPQRLL 197
Query: 176 LPSVRDPKLWMVKCAIGREREAAVCLMQKCIDK---GSELQIRSVIALDHLKNYIYIEAD 232
+P V DP LW V GRE + +K + + + + SV D + I+IEA
Sbjct: 198 MPGVNDPSLWKVVVKSGREHAICASIFRKVFAQQYSANPIDVISVFCRDSIPGMIFIEAR 257
Query: 233 KEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLA 291
+ A V A G+ I+ S+ V LVPI EM +L ++ K ++L+ WVRMK G + GDLA
Sbjct: 258 QSASVSAAVNGIVGIFMSRGVNLVPIEEMAPLLKMKKKDVNLTPGMWVRMKRGKHAGDLA 317
Query: 292 KVVDVDNVRQRVT-VKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRV 350
+VVDVD + V +K IPRIDL + E + K PP R D+ R+++ R
Sbjct: 318 QVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPGGVRPPARLFAYDDVRKIYGRQ 377
Query: 351 ERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGEN-GESD 409
R+ F+N + DGF K V + +++ +++ PT +E+ +F ++ + D
Sbjct: 378 SVRQGAQGSYLFDND---EYVDGFCIKDVKIPAVATEDVNPTLEEISRFTGDDDSTAKFD 434
Query: 410 IASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAV 468
+++++ N GD + V +G+ L G VE V + + I+ E + +T+ V
Sbjct: 435 LSAIADANKNLSTSLLFPGDKIEVYEGEQTGLYGIVEAVSPDVIAIKAEGGEVHGQTVEV 494
Query: 469 NSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSE 528
++ + K F+ G HVKV+ G A+GMV++V+ ++ ++SD +++I+VF+ D+ ++++
Sbjct: 495 PARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTLMSDLGEQEIKVFSKDLRKAAD 554
Query: 529 VTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL--KGVPDRPEVALVKLREIKCK 586
T G Y++ D+V+LD+ + GV+ +VE ++L G V +R +
Sbjct: 555 TTNLTVTKGLYDVHDMVMLDSTTAGVVTKVEGGLLRILDQNGAAKSVSPEQVSIRRDNKR 614
Query: 587 LEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICA 645
++ Q N + V D ++ +G +QG V +I+R I F+++R + ++ G A
Sbjct: 615 FAVATDSQG---NDMKVGDNMKETDGEM--RQGEVFNIFRSIFVFLYNREYTDNFGVFVA 669
Query: 646 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP-GRYSRGGPPAGGRNRGGRGGH 704
+++S + V A D ++ N P Q P G S P NR
Sbjct: 670 RANSLISVTPKSAVND-----LTKIN----PALNQQLPYGGASLMPAPTANLNR------ 714
Query: 705 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDN--------- 755
+ L+ T V V G KG G + DV+G++ RVEL+ K ++V+ + +
Sbjct: 715 NRLINTLVVVTKGTSKGLIGVIKDVQGENARVELKHNNKTLSVNLASLKRKDQKTGATFP 774
Query: 756 ------VVVSTPYRDTPRYGM------GSETPMHPSRTPLHPYM----TPMRDAGATP-- 797
+ Y P G G T MHPS P + TP G TP
Sbjct: 775 LEMAGIASAAGGYGARPNAGQYDINPYGGATAMHPSMGGQTPALMGGRTPAARFGQTPNP 834
Query: 798 ----IHDGMRTPMRDRAWNPYTP----MSPPRDNWEDGNPGSWGTS----PQY------- 838
+ +G +TP NPY +P N G +WG S P Y
Sbjct: 835 YAAGVQNG-KTP------NPYAAGVGGKTPSAANASGGKTPAWGASGGKTPAYGMASGGK 887
Query: 839 ------QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSS-TYVNAP------SPY 885
Q G P+ AY PG TP Y G P S S V AP +PY
Sbjct: 888 TPAYGMQGGKTPN-AYAMAPPGPSGGRTPA--YGAYGRPEASGSRPSVMAPPSAPYSAPY 944
Query: 886 LPSTPGGQ----PMTPNSASYLPGTPGGQPM-----TPGTGGLDAMSPVIGA 928
TP G P P + P TP G P TPG L A +P GA
Sbjct: 945 SAPTPAGNGAPTPAIPGNPYTAP-TPYGAPTPYAAPTPGMPSLSAPTPGPGA 995
>sp|Q6CC84|SPT5_YARLI Transcription elongation factor SPT5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=SPT5 PE=3 SV=1
Length = 980
Score = 269 bits (687), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 294/969 (30%), Positives = 453/969 (46%), Gaps = 133/969 (13%)
Query: 11 EMDAEEDEYDEQVMDDEIDEEEEEEDDRSSRKRRRSQFIDDVAEEDDEEEEEDYDDDEDY 70
E D E DE + + +E+D+ ++ +D + + ++ ++D+E+ +
Sbjct: 17 EEDLESDEEVKTIKSEEVDKTQDNVEDEDDEEEEEEEEEEEEEDDDEEDVRQR------- 69
Query: 71 GGGGGAARKPKAKRRSGSEFFDLEAQVDSDEEEDEEE-----GEDDFIVDGGAELPDEDG 125
+KP+ +RR ++F D+EA+VD DEE+ EE+ GED F+ + A+ PD
Sbjct: 70 -------KKPRRERR--NQFLDVEAEVDEDEEDLEEDEDGLIGEDGFVAEPDADEPDASD 120
Query: 126 GRGIHRRPLLPRED-EQEDVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKL 184
R HR RE +ED E L + +Y RS+ +Y ++ + Q LLPSV +P +
Sbjct: 121 DR-FHREMDRRREAIAEEDAERLADEYREKYGRSTANKYRGDSGVIPQHLLLPSVNEPSI 179
Query: 185 WMVKCAIGREREAAVCLMQKCIDKGSELQ-------IRSVIALDHLKNYIYIEADKEAHV 237
W ++C G+E+E L+++C+ K LQ I SV D YIY+EA + V
Sbjct: 180 WGIRCKPGKEKE----LVRQCLRKKLSLQKSRNPLEIMSVFQRDTFTGYIYMEARNQQAV 235
Query: 238 KEACKGLRNIYSQKVMLVPIREMTDVL-AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDV 296
A KGL N+Y Q ++LVPI+E D+L A +S +L +VR+K G Y GDLA V ++
Sbjct: 236 TVALKGLVNVYPQNMILVPIKEYVDLLRATKSAETELVPGAYVRLKRGKYGGDLAIVENL 295
Query: 297 DNVRQRVTVKLIPRIDLQALANK-LEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRD 355
V +KL+PR+D A ++G+ K+ +PPPR + EA + R ++R
Sbjct: 296 SENGLEVRLKLVPRLDYGRNAEAGIDGKR--KRVARIPPPRLFSEQEASQYDPRNLQKRG 353
Query: 356 PMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLS- 414
P Y G + GFLYK + ++A+N+ P +EL +F + +G D+ASL+
Sbjct: 354 PNAYVY----AGDEYIGGFLYKDFKITLVNAENVAPKLEELTRFNSEETDG-IDLASLAQ 408
Query: 415 TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAVNSKEL 473
+L + F GD V V +G+ ++G V + V + L K + + S+ L
Sbjct: 409 SLRKSAAAVQFQGGDVVEVSEGEQTGVQGTVISTHGDIVTVEATTAPLVGKRIDLPSRSL 468
Query: 474 CKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGI 533
K F G+HV+V+SG TG+++ +E + +LSD K+++ VFA D+ + S++ G
Sbjct: 469 RKKFAIGDHVRVISGNFLDDTGLIVGLEDDSVTLLSDLNKKEVTVFAKDLKKVSDI-GGS 527
Query: 534 TKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSN- 592
++GDYEL D V LD G I++VE ++ +VL V V I KL +
Sbjct: 528 HQVGDYELHDFVQLDALHVGCIVKVERDSLKVLD---QEGTVRSVTPSSITMKLTRNMEG 584
Query: 593 -VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKS--SS 649
D N + + + D VR G +G+QG V HIY+ LF+ R G AK+ +
Sbjct: 585 LATDSNGSEIKIGDTVRETVG--EGRQGAVLHIYKNTLFLSSR----SLGVFVAKAFKVN 638
Query: 650 CVVVGGSR--ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDAL 707
+V G+R +N G ++ N P PG+ + PP + +GG D L
Sbjct: 639 TIVAKGARTQSNSQATGPDLTKMN----PAVYNARPGQMA---PPVMPK----QGGFDRL 687
Query: 708 VGTTVKVRLGP-YKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI---SDNVVVSTPYR 763
G V + G +KG +G V + RVEL + KVV V + + D Y
Sbjct: 688 KGKHVAIGPGSQHKGCKGIVKETTDDIARVELHAPCKVVNVLKHQLRIYDDYKKTYLSYM 747
Query: 764 D----------------------------TPRYGMGSETPMHPS--RTPLHPYMTPMRDA 793
+ TP +G G +TP + +TP TP
Sbjct: 748 EFATPRGMRSGGGRPGGPPGPGGPGSGGQTPSWGGGGKTPSWGAGGKTPSWGSKTPSW-G 806
Query: 794 GATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQP--GSPPSRAYEAP 851
GA G RTP A N +P + P SWG S P G + A+ A
Sbjct: 807 GAKTSSWGSRTP----AANAGGAQTPAWGAMGNKTP-SWGASESRTPAWGGAKTPAWGAA 861
Query: 852 -----TPGSGWASTPGGNYSDAGTPRDSSS---------TYVNAPSP-YLPSTPG---GQ 893
TP G A TP S AGT SSS + +AP+P Y +TPG G
Sbjct: 862 GAGSKTPAFGVARTPSWKSSSAGTYGGSSSRNKGWEDLGSGNSAPTPGYAAATPGEMMGA 921
Query: 894 PMTPNSASY 902
P TP +A +
Sbjct: 922 P-TPGAAHH 929
>sp|Q2UGU3|SPT5_ASPOR Transcription elongation factor spt5 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=spt5 PE=3 SV=1
Length = 1026
Score = 262 bits (670), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 281/971 (28%), Positives = 450/971 (46%), Gaps = 165/971 (16%)
Query: 75 GAARKPKAKRRSG--SEFFDLEAQVDSDEEEDEEEGEDDFIVDGGAELPDEDGGRGI--- 129
GA +PK +RR G + FF+ EA VD DE+E E+E ++ + GG PD+ +
Sbjct: 94 GAVSRPKKRRRKGGVAHFFEEEAGVDEDEDEAEDEEDEMAEL-GGEMHPDDMDALPVGAE 152
Query: 130 ---HRRPLLPREDEQE---DVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPK 183
R L R+ E E D E + ++ RY R+ D V ++ LLPSV DP
Sbjct: 153 TDDRRHRQLDRQRELEASMDAEKQAQLLKERYGRNRAAASDAVV--VPKRLLLPSVEDPS 210
Query: 184 LWMVKCAIGREREAAVCLMQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHVK 238
+W V+C G+ERE + ++ ++ GS ++ + A + + YIY+EA ++A V
Sbjct: 211 IWGVRCKPGKEREVIFAIQKRIEERPMGSRNPMKIISAFERGGAMSGYIYVEARRQADVM 270
Query: 239 EACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVD 297
+A + + N+Y + K++LVP+REM D+L V+ K+ +L WVR+K G Y+ DLA++ +V+
Sbjct: 271 DALQDMSNVYPRTKMILVPVREMPDLLRVQ-KSEELLPGGWVRIKRGKYQNDLAQIEEVE 329
Query: 298 NVRQRVTVKLIPRIDLQALANKLEGREVA---KKKPFV------PPPRFMNVDEARELHI 348
VTV+L+PR+D N+ G +K+P + PP R + EA++ H
Sbjct: 330 TNGLAVTVRLVPRLDYGM--NEDIGAPFMDPKRKRPGMNPAVARPPQRLFSEAEAKKKHG 387
Query: 349 RVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES 408
+ + G + +G + DGFL K + ++ + +N+ P +E+ F E+G +
Sbjct: 388 KYLSATSGLGGKSWSYLG-ETYVDGFLIKDMKVQHLITKNVSPRLEEVTMFARGSEDGTA 446
Query: 409 --DIASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-K 464
D+ASL+ TL + + ++ GD V V +G+ + L G + V ++ L +
Sbjct: 447 NLDLASLAETLKNSTAEDSYLPGDPVEVFRGEQQGLIGRTTSTRGDIVTLQVTEGDLAGQ 506
Query: 465 TLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDV 523
+ K L K F G+HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+
Sbjct: 507 HIDAPVKSLRKRFREGDHVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDL 566
Query: 524 VESSEVTTGI-TKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLRE 582
S+E TG+ K+G +++ DLV LD + I++V+ E+ +VL + + +
Sbjct: 567 RLSAE--TGVDGKLGMFDVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTILPTQ 621
Query: 583 IKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHA 640
+ K+ + + DRN + D VR V G + + G + HI+R LF+H++ E++
Sbjct: 622 VTNKITPRRDAVATDRNGAEIRHGDTVREVYG--EQRNGVILHIHRSFLFLHNKAQAENS 679
Query: 641 GFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGG 700
G ++++ V V S G G ++ N P SRGGP +G
Sbjct: 680 GITVVRTTNVVTV--SAKGGRSTGPDLTKMN-----------PALMSRGGP-SGMMGPPK 725
Query: 701 RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVST 760
G D ++G TV VR GP+KG G V D RVEL S+ K+V++ + ++ VV
Sbjct: 726 SFGRDRMIGKTVMVRKGPFKGLVGIVKDAGDVQARVELHSKNKLVSIPKELL----VVKD 781
Query: 761 PYR-DTPRYGMGSETPMHPSRTPLHPYM---TPMR--DAGATPIHDGM---RTPM----- 806
P T G G P PS P + TPM D+ TP G RTP
Sbjct: 782 PVTGQTIEMGRGRGGPRVPSAAPPSGWQGGRTPMAAADSSRTPAWGGASSARTPAWAGMG 841
Query: 807 --RDRAW--------NPYTPMSPPRDNWEDGNPGSWGTSPQYQP---------------- 840
R AW NPY DG+ ++G P
Sbjct: 842 GSRTPAWKNDGSRTSNPY-----------DGSRTAYGGFGSRTPAWNAGARTPYGGSGSG 890
Query: 841 ----------------------------------GSPPSRAYEAPTPGSGWASTPGGNYS 866
GS SR Y+APTPG +++ G Y+
Sbjct: 891 QSDFDAFAAGSRTPAWNANSGSRTPAWSGATASNGSKDSRGYDAPTPGGAYSAPTPGAYA 950
Query: 867 DAGTPRDSSST----YVNAPSP--YLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLD 920
A TP S+ T +AP+P + TPGG P+ Y TP P D
Sbjct: 951 SAPTPGVSAPTPGAWADSAPTPGAFNAPTPGG----PSKKPYDAPTPAAWDSRP----YD 1002
Query: 921 AMSPVIGADNE 931
A +P +G D +
Sbjct: 1003 APTPAMGGDGD 1013
>sp|Q5BCN2|SPT5_EMENI Transcription elongation factor spt5 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=spt5 PE=3 SV=1
Length = 1016
Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 270/902 (29%), Positives = 417/902 (46%), Gaps = 144/902 (15%)
Query: 79 KPKAKRRSG----SEFFDLEAQVDSDEEEDEE---------EGEDDFIVDGGAELPDEDG 125
KP+ KRR G S F D EA VD +E+E E+ E D ++ GAE D
Sbjct: 91 KPR-KRRKGHGGLSAFIDYEAGVDEEEDEVEDEEEEEGYGLEQHPDDVLPAGAETDDRQ- 148
Query: 126 GRGIHRRPLLPREDEQE---DVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDP 182
HRR L RE E D E + ++ RY R+ D V ++ LLPSV DP
Sbjct: 149 ----HRR--LDRERELAATLDAEKQAQLLKERYGRNRAAATD--AVIVPKRLLLPSVDDP 200
Query: 183 KLWMVKCAIGREREAAVCLMQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHV 237
+W V+C G+ERE + ++ D+ GS I+ + A + + YIY+EA ++A V
Sbjct: 201 SIWGVRCKAGKEREVVFSIQKRIEDRPPGSRNPIKIISAFERGGAMSGYIYVEARRQADV 260
Query: 238 KEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDV 296
+A + + N+Y + K++LVP++EM D+L V+ K+ +L+ WVR+K G Y DLA++ +V
Sbjct: 261 MDALQDMSNVYPRTKMILVPVKEMPDLLRVQ-KSEELNPGGWVRIKRGKYMNDLAQIEEV 319
Query: 297 DNVRQRVTVKLIPRIDLQALANKLEGREVA---KKKPFV------PPPRFMNVDEARELH 347
+ VTV+L+PR+D N+ G + +K+P PP R + EA++ H
Sbjct: 320 ETNGLAVTVRLVPRLDYGM--NEDSGAPIMDPKRKRPGANPAVARPPQRLFSEAEAKKKH 377
Query: 348 IRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGE 407
+ + + N G + DGFL K + ++ + +N+ P +E+ F ENG
Sbjct: 378 SKYLTATAGLGAKSW-NYLGETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARDSENGT 436
Query: 408 S--DIASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHI---RPEMKG 461
S D+ASL+ TL + + ++ GD V V KG+ + L G + V I E+ G
Sbjct: 437 SNLDLASLAETLKNSTAEESYLPGDPVEVFKGEQQGLVGRTSSTRGDIVTILVTEGELAG 496
Query: 462 LPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFA 520
+T+ K L K F G+HVKV+ G++ GMV++V + +LSD + ++I VF+
Sbjct: 497 --QTIEAPVKTLRKRFREGDHVKVIGGSRYQDELGMVVQVRDDTVTLLSDMSMQEITVFS 554
Query: 521 DDVVESSEVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVK 579
D+ S+E TG+ K+G +++ DLV LD + I++V+ E+ +VL + +
Sbjct: 555 KDLRLSAE--TGVDGKLGMFDVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTIL 609
Query: 580 LREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHL 637
++ K+ + + DRN + D VR V G + + G + HI+R LFIH++
Sbjct: 610 PSQVTNKITPRRDAVATDRNGAEIRHGDTVREVYG--EQRSGVILHIHRSFLFIHNKAQA 667
Query: 638 EHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAG--G 695
E+AG + ++++ V V S G G S+ N R G P G
Sbjct: 668 ENAGIVVVRTTNVVTV--SAKGGRPTGPDLSKMNPA------------LMRNGAPGGMMA 713
Query: 696 RNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDN 755
G D L+G TV V+ GP+KG G V D RVEL S+ K+VT+ + ++
Sbjct: 714 PPPSKTFGRDRLLGKTVLVKKGPFKGLLGIVKDTTDVQARVELHSKNKLVTIPKELL--- 770
Query: 756 VVVSTPY----------RDTPRY----------GMGSETPMHP---SRTPLHPYMTPMRD 792
VV P R PR G TPM SRTP R
Sbjct: 771 -VVKDPVTGQTIDIGRGRGGPRVPQNSAAPSSGWQGGRTPMAAADSSRTPAWGAAMSSRT 829
Query: 793 AGATPIHDGMRTPM---------------RDRAWN-----PYTPMSPPRDNWED------ 826
+ G RTP R AWN PY D
Sbjct: 830 PAWSGAGLGSRTPAWKADGSRTAYGGAGSRTPAWNAGARTPYGGGFGSGSGNSDFDAFAA 889
Query: 827 -GNPGSWGT-----SPQYQPGSPPS-----RAYEAPTPGSGWASTPGGNYSDAGTPRDSS 875
+WG +P + + + +AY+APTPG+ +++ G Y A TP S+
Sbjct: 890 GSRTPAWGAASGSRTPAWSASANTTSRNDNKAYDAPTPGATYSAPTPGAYGGAPTPGLSA 949
Query: 876 ST 877
T
Sbjct: 950 PT 951
>sp|Q7S3C4|SPT5_NEUCR Transcription elongation factor spt-5 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=spt-5 PE=3 SV=2
Length = 1052
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 278/951 (29%), Positives = 430/951 (45%), Gaps = 158/951 (16%)
Query: 88 SEFFDLEAQVDSDEEEDEEEGE----DDFIVDGGAELPDE--DGGR-----GIHRRPLLP 136
+ FFD+EA+VD ++E ++E G+ +DFI + PD+ D GR
Sbjct: 135 AAFFDIEAEVDDEDEGEDEVGDGEEIEDFIDNA---HPDDIADSGRLNDDRRHRELDRRR 191
Query: 137 REDEQEDVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWMVKCAIGRERE 196
+ D E ++ RY + + + V ++ LLPSV DP +W V+C G+ERE
Sbjct: 192 EMEASLDAEKQAEILRERYGKRAPARGYGDMAIVPRRLLLPSVEDPSIWAVRCKEGKERE 251
Query: 197 AAVCLMQKCIDK-GSELQIRSVIALDH------LKNYIYIEADKEAHVKEACKGLRNIYS 249
+M++ ++ G++ ++ A + +K YIY+EA ++ + A G+ N+Y
Sbjct: 252 VIFSIMRRIEERMGTKNEVPITAAFERGGINSVMKGYIYVEAQRQNDILVALDGILNVYP 311
Query: 250 QKVM-LVPIREMTDVLAVESKAIDLSRDTWVRMKI-GNYKGDLAKVVDVDNVRQRVTVKL 307
+ M LV I++M D+L V K +L WVR+K + GDLA+V+DV V+
Sbjct: 312 RSNMHLVEIKDMPDLLRV-IKTPNLEPGAWVRLKKPAKHAGDLAQVIDVTENGLEARVRF 370
Query: 308 IPRIDLQALAN---KLEG-REVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFE 363
IPR+D + + +G R+ PP R + EAR+ H R + +P T +
Sbjct: 371 IPRLDYGVRDDPVFQADGKRKRPGVPGPRPPQRLFSEAEARKRHPRY-LQGNPQTNSW-- 427
Query: 364 NIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDI---ASLSTLFANR 420
N G F++GF K + ++ + +N+ PT +E+ KF + E+G ++ A +TL +
Sbjct: 428 NYNGDDFENGFQVKDIKIQQLEVKNVNPTLEEVTKFASGAEDGTENLDLKALAATLKDSA 487
Query: 421 KKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEP 479
K ++ GD + V +G+ + + G V + V ++ L +T+ V +K L K F
Sbjct: 488 KSVAYVPGDIIEVYEGEQQGVIGKATNVQGDIVTLQVTEGDLAGRTIDVPNKGLRKRFRI 547
Query: 480 GNHVKVVSGTQA-GATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGD 538
G+HVKV+ G++ GMV+K+ + +L+D T +I VF+ D+ E+S++ G +G
Sbjct: 548 GDHVKVIGGSRFRDEVGMVVKIVDDRVTLLTDQTNTEITVFSKDLREASDI-GGQGSLGQ 606
Query: 539 YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDR 596
Y L DLV LD + G I++V+ E+ VL D + V+ +I KL K+ + DR
Sbjct: 607 YSLLDLVQLDATTVGCIVKVDRESVVVLDQNGDTKQ---VQPSQITNKLPKRKFAVAADR 663
Query: 597 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS 656
N + + + DVVR G + +QG + HI+R +F+H E+AG +++S V
Sbjct: 664 NGSEIRLDDVVREYGG--QQRQGKIIHIHRSYIFLHTTTTNENAGVFVTRANSVTTVA-- 719
Query: 657 RANGDRN----GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTV 712
A G RN G S N P + ++P + P G D + TV
Sbjct: 720 -AKGGRNTATAGPDLSAMN-----PALKRNPTASGKQMPAP------RTFGPDRAINQTV 767
Query: 713 KVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS--DNVV------------- 757
+R G YKG G V D RVEL S+ K++T+ ++ +S D V
Sbjct: 768 VIRRGGYKGLLGIVKDTTDTHARVELHSRGKIITIPKADLSFKDKVTGKTIDINQRGGSR 827
Query: 758 --------------VSTPYRD-----TPRYGMG-SETPMHP-----SRTP--------LH 784
TP TP +G S TP SRTP ++
Sbjct: 828 GGFGGGGRGGGEFGSRTPMASGGSDRTPAWGSSRSRTPAWNRDAGGSRTPAWNDGSRTVN 887
Query: 785 PY---MTPMRDAGA-------TPI-HDGMRTPMRDR-AWNPYTP-MSPPRDNWEDGNPG- 830
PY TP A A TP H G RTP D TP S D+W PG
Sbjct: 888 PYDGSRTPYGGATAYGGIGSRTPAWHSGSRTPAPDSFGHGSKTPAWSAGSDSWGSKTPGY 947
Query: 831 ------------SWGTSPQYQPGSPPSRAYEAPTPGSGW-ASTPGGNYSDAGTPRDSSST 877
+WG +P G S AY+APTPG G A TPG
Sbjct: 948 GASAPTPGASGDAWGYTPGASGGGNSSSAYDAPTPGGGLSAPTPG--------------A 993
Query: 878 YVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 928
+NAP+P G P A+ TPG G+GG +P GA
Sbjct: 994 ALNAPTP-------GAYSAPTPAAVSAPTPGAWQGGWGSGGDAVSAPTPGA 1037
>sp|Q5ALX3|SPT5_CANAL Transcription elongation factor SPT5 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=SPT5 PE=3 SV=1
Length = 956
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 215/717 (29%), Positives = 362/717 (50%), Gaps = 69/717 (9%)
Query: 81 KAKRRSGSEFFDLEAQVDSDEEEDEEEG------EDDFIVDGGA------ELPDEDGGRG 128
+ +RR ++FFD+EA+VD +EE++E+E ++FI D A ++P +D
Sbjct: 99 RKRRRGANQFFDIEAEVDDEEEDEEDEDEEAELMREEFITDDHAPVETVEKMPQDDR--- 155
Query: 129 IHRRPLLPRED-EQEDVEALERRIQARYARSSHTEYDEETT---DVEQQALLPSVRDPKL 184
+HR+ R+ E +D E L ++ RY R +H+ Y ET V Q+ L+PS+ DP +
Sbjct: 156 LHRQYDNRRQQAEDQDAEQLAETLKQRY-RKTHSVYRGETAASGTVSQKLLMPSINDPSI 214
Query: 185 WMVKCAIGREREAAVCLMQK---CIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEAC 241
+ ++C GRE+E L +K +G+ L I +V D YIYIEA + + +A
Sbjct: 215 YAIRCTPGREKELVRKLYEKKRTLERQGNPLDILTVFQRDAFTGYIYIEAKRPDAIDKAL 274
Query: 242 KGLRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVR 300
G+ N++ + +LVP++E D+L V+S +++ +VR+K G Y+GDLA V ++
Sbjct: 275 VGMVNVFVRDKLLVPVKEYPDLLKQVKSSDVEIRPGIYVRIKRGIYRGDLAIVDNLSENG 334
Query: 301 QRVTVKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELH-IRVERRRDPMTG 359
V +++PR+D +V K K P P + +AR +++ R P +
Sbjct: 335 LDVRCQVVPRLDYGQNDEIGPDGKVIKSK-IKPLPALFSEQKARMYDPYKLQMGRVPNSF 393
Query: 360 DYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPG-ENGESDIASLSTLFA 418
Y G + DG+LYK ++ I +++ PT +EL++F+ E+G + A +TL
Sbjct: 394 IY----RGNEYYDGYLYKDFKLQFIQTKDVNPTLEELDRFQNQNDEDGLNLQAIAATLKG 449
Query: 419 N-----RKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKT----LAVN 469
N + F GD V + +G+ G V + + I+ G P+ L V
Sbjct: 450 NNAGEGKSSTAFQPGDKVEIRRGEQAKTIGIVVETALNEITIKVTDSGDPRFVDQRLTVP 509
Query: 470 SKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEV 529
+ +L K F G+HV++V G TG+V+K++ ++I+SD TKED+RVFA+ +V++++
Sbjct: 510 ANDLRKIFYEGDHVRIVEGKHFDETGLVIKIDGDSVVIVSDQTKEDVRVFANYLVKATDA 569
Query: 530 TTGITKIGD-YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLRE--IKCK 586
++ + Y+++DLV L + GVII+ E F VL + L+ +R+ I K
Sbjct: 570 SSNFDLLNSKYDIKDLVELSGLTVGVIIKAEKNIFDVLT-----TDGRLISVRQSGIASK 624
Query: 587 LEKKSNVQ---DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFI 643
L++ Q DRN T+ V D V+ + G K ++G + HIY+ LFI +E+ G
Sbjct: 625 LKQSRREQVATDRNGTTIRVGDTVKELLGE-KSREGAILHIYKNALFIKSNEIVENLGIF 683
Query: 644 CAKSSSCVVVGG--SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGR 701
A + V S + D S +LR P + AG + R
Sbjct: 684 VANRMNVTTVATKDSTVSKSLGPDLTSMNPNLRLPNPV-----------AVAGLKTR--V 730
Query: 702 GGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVV 758
GG D L+ V V G YKG +G+V + R+EL ++ K + V ++ + NV+V
Sbjct: 731 GGRDKLLYKDVAVTSGSYKGLKGKVTEADDLYARIELHTKSKKIKVLKNNL--NVIV 785
>sp|P27692|SPT5_YEAST Transcription elongation factor SPT5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPT5 PE=1 SV=1
Length = 1063
Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 209/711 (29%), Positives = 351/711 (49%), Gaps = 73/711 (10%)
Query: 81 KAKRRSGSEFFDLEAQVDSDEEEDEEEGEDDFIVDG----GAELPDEDGGRGIHRRPLLP 136
K +R+ + F D+EA+V DE+EDE+E + + + +G G + DE G R L
Sbjct: 171 KRRRQERNRFLDIEAEVSDDEDEDEDEEDSELVREGFITHGDDEDDEASAPGARRDDRLH 230
Query: 137 REDEQ-------EDVEALERRIQARYARSSHTEYDEETTD--VEQQALLPSVRDPKLWMV 187
R+ +Q ED + L + ++ RY RSS +Y D V Q+ LLPSV +W V
Sbjct: 231 RQLDQDLNKTSEEDAQRLAKELRERYGRSSSKQYRAAAQDGYVPQRFLLPSVDTATIWGV 290
Query: 188 KCAIGREREAAVCLMQK--CIDKG---SELQIRSVIALDHLKNYIYIEADKEAHVKEACK 242
+C G+E+E L++K +D+ +L+I S+ D+ IYIEA K++ +++ C
Sbjct: 291 RCRPGKEKELIRKLLKKKFNLDRAMGKKKLKILSIFQRDNYTGRIYIEAPKQSVIEKFCN 350
Query: 243 GLRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQ 301
G+ +IY + +L+P++E+ +L +S + L ++VR+K G YKGDLA V +
Sbjct: 351 GVPDIYISQKLLIPVQELPLLLKPNKSDDVALEEGSYVRIKRGIYKGDLAMVDQISENNL 410
Query: 302 RVTVKLIPRIDLQAL--ANKLEGREVAKKKPFV--PPPRFMN------VDEARELHIRVE 351
V +K++PR+D + + +++ F PP+ N +D+A L+ R +
Sbjct: 411 EVMLKIVPRLDYGKFDEIDPTTQQRKSRRPTFAHRAPPQLFNPTMALRLDQA-NLYKRDD 469
Query: 352 RRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIA 411
R DY DG+LYK+ ++ + +NIQPT +EL +F + + G D+
Sbjct: 470 RHFTYKNEDYI---------DGYLYKSFRIQHVETKNIQPTVEELARFGS--KEGAVDLT 518
Query: 412 SLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVN 469
S+S A K F GD + V+ G+ + KG V + ++ I+ + G L
Sbjct: 519 SVSQSIKKAQAAKVTFQPGDRIEVLNGEQRGSKGIVTRTTKDIATIK--LNGFTTPLEFP 576
Query: 470 SKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEV 529
L K FEPG+HV V++G G G+VL VEQ + +S T ++ + A+++ +S +
Sbjct: 577 ISTLRKIFEPGDHVTVINGEHQGDAGLVLMVEQGQVTFMSTQTSREVTITANNLSKSIDT 636
Query: 530 TTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVK----LREIKC 585
T + +Y L D+V L + II+ + F+V + + +V+ + L +I
Sbjct: 637 TATSS---EYALHDIVELSAKNVACIIQAGHDIFKV---IDETGKVSTITKGSILSKINT 690
Query: 586 KLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICA 645
+ S+V D N N + + D IVE ++G V +I +F+ + +E+AG
Sbjct: 691 ARARVSSV-DANGNEIKIGDT--IVEKVGSRREGQVLYIQTQQIFVVSKKIVENAGVFVV 747
Query: 646 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNR---GGRG 702
S+ V S+ N N S+ N P S+ GPP+ + RG
Sbjct: 748 NPSNVEAV-ASKDNMLSNKMDLSKMN-----------PEIISKMGPPSSKTFQQPIQSRG 795
Query: 703 GHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS 753
G + +G TV++R YKG G V DV G VEL S+ K +T+D+ ++
Sbjct: 796 GREVALGKTVRIRSAGYKGQLGIVKDVNGDKATVELHSKNKHITIDKHKLT 846
>sp|Q4I5I4|SPT5_GIBZE Transcription elongation factor SPT5 OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SPT5
PE=3 SV=1
Length = 1042
Score = 233 bits (595), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 228/845 (26%), Positives = 382/845 (45%), Gaps = 99/845 (11%)
Query: 139 DEQEDVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWMVKCAIGREREAA 198
D D E ++ RY + + + V ++ LLPSV DP +W V+C G+ERE
Sbjct: 171 DSSMDAEKQAEILRQRYGNRRSGKGFRDVSVVPKRLLLPSVDDPSIWAVRCKEGKEREVV 230
Query: 199 VCLMQKCIDK-GSELQIRSVIALDH------LKNYIYIEADKEAHVKEACKGLRNIYSQ- 250
+M++ ++ G++ ++ A + +K ++Y+EA ++ + + + N+Y
Sbjct: 231 FSIMKRIEERAGTKDELAITAAFERGGIESVMKGFVYVEARRQTDILKGLDSMMNVYPHS 290
Query: 251 KVMLVPIREMTDVLAVESKAIDLSRDTWVRM-KIGNYKGDLAKVVDVDNVRQRVTVKLIP 309
K++LV I++M ++ + SK L WVR+ + + GDLA+V+DV V+ IP
Sbjct: 291 KMILVDIKDMPELFRI-SKTPTLEPGAWVRLRRPPKHNGDLAQVIDVTENGLEARVRFIP 349
Query: 310 RIDLQALANKLEGREVAKKKPF----VPPPRFMNVDEARELHIRVERRRDPMTGDYFENI 365
R+D + L + +K+PF PP R + EAR+ + R + +P TG + N
Sbjct: 350 RLDYGMRDDALSA-DGKRKRPFGNGPKPPQRLFSEIEARKRNPRAI-QGNPSTGTWTYN- 406
Query: 366 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDI---ASLSTLFANRKK 422
F++GF + V ++ ++ ++ P+ +E+ +F + E+G ++ A +L +
Sbjct: 407 -NEEFENGFQVRDVKIQQLTVTDVNPSLEEVTRFASGAEDGTENLDLKALAHSLKDSNAL 465
Query: 423 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGN 481
++ GD V V G+ K + G +V + V I E + + + + V + L K F G+
Sbjct: 466 ATYLPGDVVEVYTGEQKGVVGKAMRVHSDVVSITVTEGELVGQEIDVPIRALRKRFNVGD 525
Query: 482 HVKVVSGTQA-GATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYE 540
HVKV+ G++ GMV+ + + IL+D T +I VF+ D+ E+S++ G +G Y
Sbjct: 526 HVKVIGGSKFRDEVGMVVNIRDDKVTILTDQTNTEITVFSKDLREASDI-GGQGSLGQYS 584
Query: 541 LRDLVLLDNNSFGVIIRVESEAFQVLK--GVPDRPEVALVKLREIKCKLEKKSN--VQDR 596
L DLV LD + G +++V+ E+ L G P + V +I K+ K+ DR
Sbjct: 585 LHDLVQLDPTTVGCVVKVDRESLVALDQFGTPRQ-----VMPSQISNKIPKRKTAVAVDR 639
Query: 597 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSS--SCVVVG 654
+ + + ++DVV+ G + +QG + HI+R +F+H + EHAG K++ + V
Sbjct: 640 HGSEIRLEDVVKEYTG--QQRQGKIIHIHRSYIFLHSNDNKEHAGVFVTKANMVNTVAAK 697
Query: 655 GSRAN-GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVK 713
G R N G + N P G ++ PP G D + TV
Sbjct: 698 GGRVNTAAATGPDLTAMN----PALKLHKNGSENKPVPPPRSF------GKDKAIEQTVV 747
Query: 714 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRD--------- 764
++ G YKG G V D RVEL ++ K +TV + ++ ++ D
Sbjct: 748 IKKGAYKGLLGIVKDTTDTHARVELHTKSKTITVPKDCLAFKNRMTGATIDIASRGGRGG 807
Query: 765 -------------TPRYGMGSETPM---HPSRTPLHPYMTPMRDAGATPIH-----DGMR 803
P + GS TPM + R P TP +G TP G R
Sbjct: 808 YGGGAGRGGGGDRVPGWQSGSRTPMAGGNSDRVPAWGSRTPAA-SGRTPAWKAQDMSGAR 866
Query: 804 TPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS---T 860
TP AW + P D GS G +P +Q G P PG + + T
Sbjct: 867 TP----AWADGSRTVNPYDGSRTAY-GSGGRTPAWQAGG------RTPAPGDAFGAGSRT 915
Query: 861 PGGNYSDAGTPRDSSSTY-VNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGL 919
P D+ + + V AP+ P GG P SY TPGG P G +
Sbjct: 916 PAYGGGDSWGSGSKTPAWGVTAPT---PGASGGDAWGP--GSYDAPTPGGALGAPTPGAM 970
Query: 920 DAMSP 924
+A +P
Sbjct: 971 NAPTP 975
>sp|Q6FRZ5|SPT5_CANGA Transcription elongation factor SPT5 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SPT5 PE=3 SV=1
Length = 1010
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 216/785 (27%), Positives = 381/785 (48%), Gaps = 87/785 (11%)
Query: 21 EQVMDDEIDEEEEEEDDRSSRKRRRSQFIDDVAEEDDEEEEEDYDDDEDYGG-------- 72
E +++ ++++ E+D+ S K S + A++D + + + ++++D G
Sbjct: 49 ENSLENSLEKDNAEKDNAESEKGSPS-VTETAADDDSSKTDGNGEENQDAEGLAEDYDEE 107
Query: 73 -----GGGAARKPKAKRRSG--SEFFDLEAQVDSDEEEDEEEGEDDFIVDG----GAELP 121
+P AKRR + F D+EA+V DEE++E+E + + + +G G +
Sbjct: 108 DFDEDEDDEDEEPAAKRRQQERNRFLDIEAEVSEDEEDEEDEEDSELVREGFITHGEDED 167
Query: 122 DEDGGRGIHRRPLLPREDEQ-------EDVEALERRIQARYARSSHTEYDEETTD--VEQ 172
DE+G G R L R+ +Q ED + L + ++ RY RSS +Y D V Q
Sbjct: 168 DEEGVAGNRRGDRLHRQLDQDLNKSSEEDAQRLAKELRERYGRSSSKQYRAAAQDGYVPQ 227
Query: 173 QALLPSVRDPKLWMVKCAIGREREAAVCLMQK--CIDKG---SELQIRSVIALDHLKNYI 227
+ LLPSV +W V+C G+E+E L++K +D+ +L+I S+ D+ I
Sbjct: 228 RFLLPSVDTATIWGVRCRPGKEKELVRKLLKKKFNLDRAMGKRKLKILSIFQRDNYTGRI 287
Query: 228 YIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRDTWVRMKIGNY 286
YIEA K++ +++ C G+ +IY + +L+P++E+ +L +S + L ++VR+K G Y
Sbjct: 288 YIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPSKSDDVALEEGSYVRVKRGIY 347
Query: 287 KGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAKKKPFV--PPPRFMN--- 339
KGDLA V + V +K++PR+D + + + +++ F P P+ N
Sbjct: 348 KGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPVTQQRKSRRPTFAHRPAPQLFNPTM 407
Query: 340 ---VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 396
+D+A L+ R +R DY DG+LYK+ ++ + +NIQPT +EL
Sbjct: 408 ALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSFRIQHVETKNIQPTVEEL 457
Query: 397 EKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVH 454
+F + + G D+ ++S A K F GD V ++ G+ + +G V K
Sbjct: 458 ARFGS--KEGAVDLTAISQSIKKAQAAKVSFQPGDRVEILNGEQRGSRGIVAKSTTTIAT 515
Query: 455 IR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTK 513
+ PE P V++ L K FEPG+HV V++G G G+VL ++Q + +S+ T+
Sbjct: 516 VNLPEFPLKPLEFPVSA--LRKIFEPGDHVMVINGEHQGDAGLVLTIKQGQVTFMSNQTR 573
Query: 514 EDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRP 573
E++ + A+++ +S + T + +Y L D+V L + II+ + F+V + +
Sbjct: 574 EEVTITANNLSKSIDSTPTSS---EYSLHDIVELSAKNVACIIQAGHDIFKV---IDETG 627
Query: 574 EVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILF 630
+V+ + I K+ + D + N + + D IVE ++G V +I +F
Sbjct: 628 KVSTITKGSILSKINTSRSRLTTVDSSGNEIKIGD--SIVEKIGARREGQVLYIQSQQIF 685
Query: 631 IHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGG 690
+ + +E+AG + + S+ N N S+ N P S+ G
Sbjct: 686 VVSKKIVENAGVFVVNPVNVEAI-ASKDNMLNNKLDLSKMN-----------PDIISKMG 733
Query: 691 PPAGGRNRGG--RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVD 748
PP R G + +G TV+VR YKG G V DV G VEL S+ K +T+D
Sbjct: 734 PPKSSMPSAAPVRTGREVALGKTVRVRSAGYKGQLGIVKDVNGDKATVELHSKNKHITID 793
Query: 749 RSMIS 753
+ ++
Sbjct: 794 KRKLT 798
>sp|Q6CWW9|SPT5_KLULA Transcription elongation factor SPT5 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SPT5 PE=3 SV=1
Length = 1036
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 230/867 (26%), Positives = 383/867 (44%), Gaps = 97/867 (11%)
Query: 112 FIVDGGAELPDEDGGRGIHRRPLLPREDEQ-------EDVEALERRIQARYARSSHTEYD 164
FI G E ++ GGR R L RE +Q ED+ + + RY R S +Y
Sbjct: 167 FITRGDEEDEEDRGGRVDDR---LHRELDQNLQKTADEDMHKIAEDFKKRYGRDSSKDYR 223
Query: 165 EETTD--VEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQK--CIDKG---SELQIRSV 217
+T V Q+ +LPSV +W V+C G+E+E L+ K +DK +L+I S+
Sbjct: 224 VQTQGGYVPQRFMLPSVDTAIIWSVRCRPGKEKELVRKLLNKKFNLDKSMGSKKLKILSI 283
Query: 218 IALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRD 276
D+ IYIEA K++ +++ G+ ++YS + +L+P++E+ +L +S + L
Sbjct: 284 FQRDNYTGRIYIEAPKQSVIEKFVNGVPDVYSNQKLLIPVQELPLLLKPTKSDEVRLDVG 343
Query: 277 TWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE---GREVAKKKPFV- 332
++VR+K G YK DLA + + +K++PR+D ++++ + AK+ F
Sbjct: 344 SYVRIKRGIYKNDLAVIDQISQNNLEALLKIVPRLDY-GKNDEIDPDTNQRKAKRATFAS 402
Query: 333 -PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQP 391
PPP+ N A L +RD Y + + DG+L+K+ ++ + +NIQP
Sbjct: 403 RPPPQLFNPTMALRLDQANLFKRDDRHFTYRKED----YVDGYLFKSFKIQYLDTKNIQP 458
Query: 392 TFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVD 449
T +EL +F + + G+ D+A+++ A K F GD V V+ G+ + +G V +
Sbjct: 459 TVEELSRFGS--KEGDVDLAAIAQTMKKAQASKAMFQPGDRVEVLTGEQRGSRGVVTRSS 516
Query: 450 EENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIIL 508
++ + ++ + G K+L L K FE G+HV V++G G G+VL V+ + +
Sbjct: 517 KDVISVK--LSGFSDKSLEFPIASLRKIFELGDHVTVIAGEHEGNAGLVLLVQNGQVTFV 574
Query: 509 SDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKG 568
SD T+E++ + A+++ +S + T + +Y L D+V L + +I+ + F++
Sbjct: 575 SDQTRENLTISANNLSKSMDSTPTSS---EYALHDIVELSAKNVACVIQAGHDIFKI--- 628
Query: 569 VPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIY 625
+ D +VA V I K+ K D N + + DVVR E ++G V ++
Sbjct: 629 IDDSGKVATVTKGSILAKINVARAKVAAVDGNGREIKIGDVVR--EKIGSRREGQVLYVQ 686
Query: 626 RGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGR 685
+FI + E+AG + V S+ N + S+ N P
Sbjct: 687 NQHIFIRSKTITENAGVFVVNPMNVEAV-ASKENLMSSALDLSKIN-----------PNI 734
Query: 686 YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVV 745
S+ GPP + + G D + TV++R YKG G V DV G +EL S+ K +
Sbjct: 735 ASKMGPPQTTQ-QTRLVGRDVALNKTVRIRSAGYKGQLGIVKDVNGDKATIELHSKNKHI 793
Query: 746 TVDR---SMISDNVVVSTPYRD-TPRYGMGSETPMHPS--RTPLHPYMTPMRDAGATPIH 799
T+D+ + S Y + R G T + PS P H M GA +
Sbjct: 794 TIDKRKLTYFSHEGGEGITYDELVSRRGRTPHTRLGPSYVSAPRH-----MAAGGAVATN 848
Query: 800 D-----GMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY-------------QPG 841
G TP WN + P ++G SWG + + G
Sbjct: 849 TPQQLPGGMTP----GWNAFDGGKTPAVG-QNGGTSSWGGASTWGGQGPGGASAWGGAAG 903
Query: 842 SPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSAS 901
+ + + T G AST G S G ++S A S + GG + S
Sbjct: 904 NTSTWGGQGATSTWGGASTWGNKSSYGGASSWAASGESGAASAW----GGGNKSSYGGTS 959
Query: 902 YLPGTPGGQPMTPGTGGLDAMSPVIGA 928
G GG G+G S G
Sbjct: 960 TWGGNQGGVSAWGGSGNKSQRSKNTGG 986
>sp|Q759T6|SPT5_ASHGO Transcription elongation factor SPT5 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=SPT5 PE=3 SV=2
Length = 958
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 202/708 (28%), Positives = 344/708 (48%), Gaps = 71/708 (10%)
Query: 81 KAKRRSGSEFFDLEAQVDSDEEEDEEEGEDDFIVDG----GAELPDEDGGRG-----IHR 131
K +RR + F D+EA+V DEE+DE++ + + + +G G E +ED +G +HR
Sbjct: 76 KKQRRERNRFLDIEAEVSDDEEDDEDDEDSELVREGFITHGDEDEEEDDAQGSKDDRLHR 135
Query: 132 R-PLLPREDEQEDVEALERRIQARYARSSHTEYDEETTD--VEQQALLPSVRDPKLWMVK 188
+ ++ +ED + L + ++ RY RSS +Y D V Q+ +LPSV +W V+
Sbjct: 136 QLDQDLQKSSEEDAQKLAKELRERYGRSSSKQYRAAAQDGYVPQRFMLPSVDTATVWGVR 195
Query: 189 CAIGREREAAVCLMQKCIDK-----GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKG 243
C G+E++ L++K + +L+I S+ D IYIEA K++ +++ C G
Sbjct: 196 CRPGKEKDLVKKLLKKKFNLDKSMGSKKLKILSIFQRDSFSGRIYIEAPKQSVIEKFCNG 255
Query: 244 LRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQR 302
+ +IY + +L+P++E+ +L +S + L ++VR+K G YKGDLA V + +
Sbjct: 256 VPDIYVNQKLLIPVQELPLLLKPSKSDDVRLEPGSYVRIKRGIYKGDLAVVEQLSDNNLE 315
Query: 303 VTVKLIPRIDL--QALANKLEGREVAKKKPFV--PPPRFMN------VDEARELHIRVER 352
+K++PR+D + ++ AKK F PPP+ N +D+A L+ R E+
Sbjct: 316 CMLKVVPRLDYGKNDEVDPDTQQKKAKKVSFAQRPPPQLFNPTMALRMDQA-NLYKRDEK 374
Query: 353 RRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIAS 412
DY DG+L K ++ + NI PT +EL +F + ++G D+ +
Sbjct: 375 HFTYRNEDYI---------DGYLIKVFKIQYLKTANIHPTVEELARFGS--KDGAVDLTT 423
Query: 413 LSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAVN 469
+S A K F GD V ++ G+ + KG+V + + + + + G K L
Sbjct: 424 ISQTIKKAQASKAMFQPGDRVEILNGEQRGSKGYVTRTSTDIISV--SLTGFNAKPLGFP 481
Query: 470 SKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEV 529
L K FEPG+HV V+SG G G+VL V+ + +SD T+E++ + A+++ +S +
Sbjct: 482 VSSLRKIFEPGDHVSVMSGDHQGDAGLVLIVKNGQVTFVSDQTRENLTISANNLTKSMDS 541
Query: 530 TTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVK----LREIKC 585
T + DY L D+V L + +I+ + F+VL D +V+ V L++I
Sbjct: 542 TPTSS---DYALHDIVELSAKNVACVIQAGHDIFKVLD---DSGKVSTVTKGSILKKINT 595
Query: 586 KLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICA 645
+ + V D N + + D V VE ++G V ++ +FI + +E+AG
Sbjct: 596 TRSRIAAV-DGNGKEIKIGDTV--VEKVGARREGQVLYVQSHQIFIVSKKIVENAGVFVV 652
Query: 646 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHD 705
+ V R S+ + + P I G S+ P G D
Sbjct: 653 NPMNVEAV------ASRENLIASKLDLTKMNPEIAAKMGPPSQTAQPVS-------VGRD 699
Query: 706 ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS 753
+ TV++R YKG G V DV G VEL S+ K +TVD+ ++
Sbjct: 700 VALNKTVRIRSAGYKGQLGIVKDVNGDMATVELHSKNKHITVDKRKLT 747
>sp|Q6BZG0|SPT5_DEBHA Transcription elongation factor SPT5 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=SPT5 PE=3 SV=2
Length = 967
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 222/878 (25%), Positives = 352/878 (40%), Gaps = 183/878 (20%)
Query: 115 DGGAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSSHTEYDEETT---DVE 171
D E D+ R RR +E E +D E L ++ RY R +HT Y +TT V
Sbjct: 180 DSAGEHQDDRLHRQFDRRR---QEAEDQDAEVLAETLKQRY-RKTHTVYRGDTTASGTVS 235
Query: 172 QQALLPSVRDPKLWMVKCAIGREREAAVCLMQK--CIDKGSELQIRSVIALDHLKNYIYI 229
Q+ L+PS+ DP ++ ++C GRE++ L +K + + + L+I +V D K YIYI
Sbjct: 236 QKLLMPSINDPAIYAIRCTPGREKDLVRKLYEKKRTLARSNPLEILTVFQRDSFKGYIYI 295
Query: 230 EADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKAIDLSRDTWVRMKIGNYKG 288
EA K ++ A G+ NIY+++ +LVP+RE D+L V+S +++ +VR+ G YK
Sbjct: 296 EAKKPEAIERALTGMVNIYAKQRLLVPVREYPDLLKQVKSSDVEIVPGIYVRITRGKYKN 355
Query: 289 DLAKVVDVDNVRQRVTVKLIPRIDLQALAN-KLEGREVAKKKPFVPPPRFMNVDEARELH 347
DLA V ++ V KL+PR+D + +G+ + K P PR + EAR
Sbjct: 356 DLAIVDNLSENGLDVRCKLVPRLDYGKNDDFDKDGKRIRSKTK--PIPRLFSEQEARMYD 413
Query: 348 IR-VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRT--PGE 404
++ R P Y G + +GFL+K ++ I +++ P +EL++F+T P E
Sbjct: 414 GEYLQSGRGPRAFIYR----GEEYNEGFLFKDFKLQFIQTKDVHPKLEELDRFQTGDPEE 469
Query: 405 NGESDIASLSTLFANR-------KKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP 457
+G D+A+++ N+ + F GD V + +G+ G V + I
Sbjct: 470 DG-LDLAAIAASLKNKNNSEGAGRSSAFQPGDKVEIRRGEQAKTIGKVLSTSLNEITILV 528
Query: 458 EMKGLPKT----LAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTK 513
G PK L V + +L K F G+HV+V+ G + TG+V+K+
Sbjct: 529 TDSGDPKFVNQRLTVPANDLRKLFSAGDHVRVIEGKHSDETGLVIKI------------- 575
Query: 514 EDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNS---------------------- 551
DN+S
Sbjct: 576 ----------------------------------DNDSVILLSDQTKQDVRVFANYLIKA 601
Query: 552 --------------------------FGVIIRVESEAFQVLKGVPDRPEVALVKLREIKC 585
GVI++ E +F+VL + V I
Sbjct: 602 TDASSNTDVTGGKYDLNDLVQLNVSTVGVIVKAEKSSFEVL---TSEGRLMSVNPAGIAS 658
Query: 586 KLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAG- 641
KLE ++ DRN +TV + D V+ V G K ++G + HIY+ LFI LE+ G
Sbjct: 659 KLELSRREQIATDRNGSTVKIGDTVKEVLGDKK-REGAILHIYKNSLFIKSNEILENLGV 717
Query: 642 FICAKSSSCVVVGGSRANGDRNGDAYSRFN-SLRTPPRIPQSPGRYSRGGPPAGGRNRGG 700
F+ + + G +R N +L+ P I AG + R
Sbjct: 718 FVTNCMNVSTITTKDSIVSKSLGPDLNRMNPNLKLPNPIAN-----------AGLKTR-- 764
Query: 701 RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNV---- 756
GG D L+ V V G YKG G+V + R+EL ++ K + V ++ +S V
Sbjct: 765 VGGRDKLIYKDVLVNSGNYKGLMGKVTEADEVYARIELHTKSKKIKVTKNSLSVLVRGEA 824
Query: 757 --------VVSTPYRDTPRYGMGSETPMHPSRTPLH--PYMTPMRDAGATPIHDGMRTPM 806
S P P G + P++TP + GATP G T
Sbjct: 825 IPYLRFIGASSGPGNSNPSGNFGGASFNQPAKTPAFSSGGKSSWGSGGATPSVGGGAT-- 882
Query: 807 RDRAWNPYTPMSPPRDNWEDGNPGSW--GTSPQYQPGSPPSRAYEAPTPGSGWASTPGGN 864
AW G SW G +P Y G+ + A S W + G
Sbjct: 883 ---AWGS------------GGAQSSWGGGKTPAYNSGNASTWGGNAG-GASAWGNNNGNA 926
Query: 865 YSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASY 902
+ ++ S+ S + S GG+ N +++
Sbjct: 927 STWGSNSKNGGSSTWGGNSTWGNSNKGGKSSWGNGSAW 964
>sp|Q9Y9W3|NUSG_AERPE Putative transcription antitermination protein NusG OS=Aeropyrum
pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC
100138 / K1) GN=APE_2176.1 PE=3 SV=2
Length = 151
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 181 DPKLWMVKCAIGREREAAVCLMQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEA 240
D + + + G E A + ++ G L IRS+I +K Y+ +EA V +A
Sbjct: 6 DARFYAILVTSGAEVNVATIIAERARALG--LDIRSIIVPPRIKGYVILEAHDPGDVYDA 63
Query: 241 CKGLRNIYSQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVR 300
+GLR++ ++ +++ E+ ++ E + L V + G +KG A+V+DV+ +
Sbjct: 64 TRGLRHVKRRRPLILKFEEVMKLVKPEVEIPALKPGQVVEIVAGAFKGMKARVIDVNQSK 123
Query: 301 QRVTVKLI 308
+VTV L+
Sbjct: 124 GQVTVSLL 131
>sp|Q57818|NUSG_METJA Putative transcription antitermination protein NusG
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0372
PE=1 SV=1
Length = 147
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 184 LWMVKCAIGREREAAVCLMQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKG 243
++ V+ +G+E+ A + + + +L + S++A + LK Y+ +EA+ + V+E KG
Sbjct: 2 IFAVRTMVGQEKNIAGLMASRA--EKEQLDVYSILASESLKGYVLVEAETKGDVEELIKG 59
Query: 244 LRNIYSQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRV 303
+ + + I E+ +L + ++ + V + G +KG+ AKV+ VD ++ V
Sbjct: 60 MPRVRGIVPGTIAIEEIEPLLTPKKIIENIEKGDVVEIIAGPFKGERAKVIRVDKHKEEV 119
Query: 304 TVKL 307
T++L
Sbjct: 120 TLEL 123
>sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A
PE=1 SV=2
Length = 1970
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 814 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 873
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 874 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 928
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 929 DN 930
D+
Sbjct: 1964 DD 1965
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
Query: 765 TPRYGMGSET--PMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRD 822
+P+Y S T P P +P P +P +P++ TP + Y+P SP
Sbjct: 1871 SPKYSPTSPTYSPTTPKYSPTSPTYSP-----TSPVY----TPTSPK----YSPTSP--- 1914
Query: 823 NWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDS 874
+ +P TSP Y P SP Y +PG S S A +P DS
Sbjct: 1915 TYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDS 1966
>sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II subunit RPB1 OS=Mus musculus GN=Polr2a
PE=1 SV=3
Length = 1970
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 814 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 873
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPASP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 874 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 928
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 929 DN 930
D+
Sbjct: 1964 DD 1965
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
Query: 765 TPRYGMGSET--PMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRD 822
+P+Y S T P P +P P +P +P++ TP + Y+P SP
Sbjct: 1871 SPKYSPTSPTYSPTTPKYSPTSPTYSP-----TSPVY----TPTSPK----YSPTSP--- 1914
Query: 823 NWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDS 874
+ +P TSP Y P SP Y +PG S S A +P DS
Sbjct: 1915 TYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDS 1966
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 446,369,084
Number of Sequences: 539616
Number of extensions: 23151860
Number of successful extensions: 191576
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 2065
Number of HSP's that attempted gapping in prelim test: 107406
Number of HSP's gapped (non-prelim): 36341
length of query: 1039
length of database: 191,569,459
effective HSP length: 128
effective length of query: 911
effective length of database: 122,498,611
effective search space: 111596234621
effective search space used: 111596234621
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)