Query 001641
Match_columns 1039
No_of_seqs 381 out of 2011
Neff 6.9
Searched_HMMs 29240
Date Tue Mar 26 16:41:00 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001641.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_938-942//hhsearch_pdb/001641hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y65_A Kinesin, kinesin heavy 1.0 1 1 743.7 22.6 349 5-391 8-359 (365)
2 3b6u_A Kinesin-like protein KI 1.0 1 1 738.9 23.1 345 5-384 18-371 (372)
3 3bfn_A Kinesin-like protein KI 1.0 1 1 731.3 22.3 349 3-397 16-374 (388)
4 2owm_A Nckin3-434, related to 1.0 1 1 730.2 26.4 347 6-381 36-429 (443)
5 2vvg_A Kinesin-2; motor protei 1.0 1 1 728.6 23.7 332 7-379 3-348 (350)
6 1goj_A Kinesin, kinesin heavy 1.0 1 1 726.5 24.7 339 4-381 2-345 (355)
7 3cob_A Kinesin heavy chain-lik 1.0 1 1 725.2 25.8 348 7-397 4-356 (369)
8 1x88_A Kinesin-like protein KI 1.0 1 1 722.5 18.7 336 5-375 5-359 (359)
9 1t5c_A CENP-E protein, centrom 1.0 1 1 718.6 26.4 338 6-379 2-341 (349)
10 2wbe_C Bipolar kinesin KRP-130 1.0 1 1 716.7 20.3 334 6-376 21-371 (373)
No 1
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=743.66 Aligned_cols=349 Identities=38% Similarity=0.632 Sum_probs=317.3
Q ss_pred CCCCCEEEEEEECCCCCCHHCCCCCEEEEEECC--CCCEEECCEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 999963899971899960100499517998379--860354761477025768999877311122423369876338885
Q 001641 5 SENCSVKVAVHVRPLIGDERAQGCKECVAVTHG--NPQVQIGTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNA 82 (1039)
Q Consensus 5 ~~~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~--~~~v~~~~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~~l~G~N~ 82 (1039)
+..++|+|+|||||+++.|...++..++.+.++ ...+.++.+.|+||+||+++++ |++||+.++.|+|+++|+|||+
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~~~~f~FD~Vf~~~~~-Q~~Vy~~~~~plv~~~l~G~n~ 86 (365)
T 2y65_A 8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNAS-QEKVYNEAAKSIVTDVLAGYNG 86 (365)
T ss_dssp CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEETTEEEECSEEECTTCC-HHHHHHHHTHHHHHHHHTTCCE
T ss_pred CCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEECCEEEECCEEECCCCC-HHHHHHHHHHHHHHHHHCCCCE
T ss_conf 899995999994969946731599259994799877679989989867469647899-8999998630377998679824
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 47753357887542026688898765553588999999999501365179996033222237854027854465434468
Q 001641 83 TVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANG 162 (1039)
Q Consensus 83 tIlaYGqTgSGKTyTm~G~~~~~~~~GIipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~~~~~~ 162 (1039)
||||||||||||||||+|+.+++..+|||||++++||..+.......+|.|+|||+|||||+|+|||++..
T Consensus 87 tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--------- 157 (365)
T 2y65_A 87 TIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSK--------- 157 (365)
T ss_dssp EEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTC---------
T ss_pred EEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC---------
T ss_conf 89834589999964886688875557737799999999998336895399999999998772126225876---------
Q ss_pred CCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCC
Q ss_conf 89864458999914674799948964974899199999999998224376303578888999844799999986431355
Q 001641 163 HAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHS 242 (1039)
Q Consensus 163 ~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~t~~N~~SSRSH~Ifti~i~q~~~~~~ 242 (1039)
..+.+++++.++++|.|++++.|.|++|++.+|..|..+|++++|.||..|||||+||+|+|.+....
T Consensus 158 ----------~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-- 225 (365)
T 2y65_A 158 ----------VNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLE-- 225 (365)
T ss_dssp ----------CSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETT--
T ss_pred ----------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECC--
T ss_conf ----------77237887999878427889965879999999999986466523568887887639999999997058--
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 79999999989996458832555445897433456998751023343324237899999995110047899753589980
Q 001641 243 VSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSK 322 (1039)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~g~r~kEg~~IN~SL~aLg~vI~aL~~~~~~~~~~~vPyRdSk 322 (1039)
......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|+++++ .||||||||
T Consensus 226 ------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~----~hvPyRdSk 289 (365)
T 2y65_A 226 ------------NQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNK----THIPYRDSK 289 (365)
T ss_dssp ------------TCCEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCC----SCCCGGGCH
T ss_pred ------------CCCEEEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCCCCCCH
T ss_conf ------------8878689999997999882012189522478998888889999989999852788----878663578
Q ss_pred HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH-HHHHHHHHHH
Q ss_conf 13332102799950678853399888989899999999995032376532444425899-9999999999
Q 001641 323 LTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDM-QKLRQQLKYL 391 (1039)
Q Consensus 323 LTrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~fa~rar~IKNkPvvN~d~~~~ei-~~Lr~ei~~L 391 (1039)
||+||||+|||||+|+|||||||++.+++||++||+||+||++|+|+|++|.++...++ .+++.++..+
T Consensus 290 LT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~ 359 (365)
T 2y65_A 290 LTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKN 359 (365)
T ss_dssp HHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHHHHC--------
T ss_pred HHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHH
T ss_conf 8898776138996379999846752788999999999999721567541178899999999999999999
No 2
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=738.87 Aligned_cols=345 Identities=44% Similarity=0.676 Sum_probs=313.8
Q ss_pred CCCCCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEEC---------CEEEEECEEECCCCCCCCCCCCCCCHHHHHH
Q ss_conf 9999638999718999601004995179983798603547---------6147702576899987731112242336987
Q 001641 5 SENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIG---------THSFTFDHVYGNGGSPSSAMFGECVAPLVDG 75 (1039)
Q Consensus 5 ~~~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~~~~v~~~---------~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~ 75 (1039)
...++|+|+|||||++..|...++..|+.+.+...++.+. .+.|+||+||+++++ |++||+.++.|+|++
T Consensus 18 ~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~-Q~~Vy~~~~~plv~~ 96 (372)
T 3b6u_A 18 GSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAK-QFELYDETFRPLVDS 96 (372)
T ss_dssp ---CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCC-HHHHHHHTHHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCEEECCCCC-HHHHHHHHHHHHHHH
T ss_conf 8999839999869899355304996389995899879997788777778438876869688674-178988787777899
Q ss_pred HHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCC
Q ss_conf 63388854775335788754202668889876555358899999999950136517999603322223785402785446
Q 001641 76 LFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVS 155 (1039)
Q Consensus 76 ~l~G~N~tIlaYGqTgSGKTyTm~G~~~~~~~~GIipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~ 155 (1039)
+|+|||+||||||||||||||||+|..+++..+|||||++.+||..+.. .....|.|+|||+|||||+|+|||++..
T Consensus 97 ~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~-- 173 (372)
T 3b6u_A 97 VLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISR-SQNQQYLVRASYLEIYQEEIRDLLSKDQ-- 173 (372)
T ss_dssp HHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHT-CSSCEEEEEEEEEEEETTEEEETTSSCT--
T ss_pred HHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEECCEEEECCCCCC--
T ss_conf 8679813588656899999875755899834488188999999998651-4577369999899996788899778977--
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 54344688986445899991467479994896497489919999999999822437630357888899984479999998
Q 001641 156 KSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLE 235 (1039)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~t~~N~~SSRSH~Ifti~i~ 235 (1039)
...+.|++++.++++|.|++++.|.|++|++.+|..|..+|.+++|.||..|||||+||+|+|+
T Consensus 174 ----------------~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~ 237 (372)
T 3b6u_A 174 ----------------TKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIE 237 (372)
T ss_dssp ----------------TCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEE
T ss_pred ----------------CCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf ----------------7773689879996752898899926799999999999976672545577877764299999999
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 64313557999999998999645883255544589743345699875102334332423789999999511004789975
Q 001641 236 QMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVH 315 (1039)
Q Consensus 236 q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~g~r~kEg~~IN~SL~aLg~vI~aL~~~~~~~~~~~ 315 (1039)
+.... .+.......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|++++. .|
T Consensus 238 ~~~~~-----------~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~----~h 302 (372)
T 3b6u_A 238 CSEVG-----------LDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKS----TH 302 (372)
T ss_dssp EEC----------------CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC-------C
T ss_pred EEECC-----------CCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CC
T ss_conf 96047-----------7887626788999997988765544575154314675650649999999999863898----87
Q ss_pred CCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 358998013332102799950678853399888989899999999995032376532444425899999
Q 001641 316 VPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKL 384 (1039)
Q Consensus 316 vPyRdSkLTrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~fa~rar~IKNkPvvN~d~~~~ei~~L 384 (1039)
|||||||||+||||+|||||+|+|||||||++.+++||++||+||+||++|+|+|++|.++....+.+|
T Consensus 303 vPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~~~~~~~ 371 (372)
T 3b6u_A 303 IPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREF 371 (372)
T ss_dssp CCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC----------
T ss_pred CCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHC
T ss_conf 866220889999986299954899999688524799999999999998645566625577579999851
No 3
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=731.30 Aligned_cols=349 Identities=36% Similarity=0.567 Sum_probs=307.5
Q ss_pred CCCCCCCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEE-------CCEEEEECEEECCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99999963899971899960100499517998379860354-------76147702576899987731112242336987
Q 001641 3 TASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI-------GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDG 75 (1039)
Q Consensus 3 ~~~~~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~~~~v~~-------~~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~ 75 (1039)
+.+..++|+|+|||||++..|...++..|+.+..+.. +.+ ..+.|+||+||+++++ |++||+.++.|+|++
T Consensus 16 ~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~-~~i~~~~~~~~~~~f~FD~Vf~~~~t-Q~~Vy~~~~~plv~~ 93 (388)
T 3bfn_A 16 FQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCS-LEIANWRNHQETLKYQFDAFYGERST-QQDIYAGSVQPILRH 93 (388)
T ss_dssp SSSCCCCCEEEEEECCCC------------------------------CEEEEECSEEECTTCC-HHHHHHHHTGGGHHH
T ss_pred CCCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCE-EEEECCCCCCCEEEEECCEEECCCCC-HHHHHHHHHHHHHHH
T ss_conf 5689999799997798991453469986399559985-99956888877059872369567897-757789988888887
Q ss_pred HHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC---CCCCEEEEEEEHHHHHHHHHHHHCCCC
Q ss_conf 63388854775335788754202668889876555358899999999950---136517999603322223785402785
Q 001641 76 LFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETL---RHQMEFQLHVSFIEILKEEVRDLLDSV 152 (1039)
Q Consensus 76 ~l~G~N~tIlaYGqTgSGKTyTm~G~~~~~~~~GIipr~~~~LF~~i~~~---~~~~~~~v~vS~~EIynE~i~DLL~~~ 152 (1039)
+|+|||+||||||||||||||||+|+ ...+|||||++.+||..+... .....|.|+|||+|||||+|+|||+|.
T Consensus 94 ~l~G~N~tifAYGqTGSGKTyTM~G~---~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~ 170 (388)
T 3bfn_A 94 LLEGQNASVLAYGPTGAGKTHTMLGS---PEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPA 170 (388)
T ss_dssp HTTTCCEEEEEESCTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCS
T ss_pred HHCCCEEEEEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHHCCC
T ss_conf 61696566761168889997686567---556641689999999999874233777148999999999888645600167
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 44654344688986445899991467479994896497489919999999999822437630357888899984479999
Q 001641 153 SVSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTI 232 (1039)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~t~~N~~SSRSH~Ifti 232 (1039)
. ..+.|+|++.++++|.|++++.|.|++|++.+|..|..+|.+++|.||..|||||+||+|
T Consensus 171 ~-------------------~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i 231 (388)
T 3bfn_A 171 S-------------------GDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLV 231 (388)
T ss_dssp S-------------------CBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEE
T ss_pred C-------------------CCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 8-------------------884599869999885360599958999999999997502652236477877777399999
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99864313557999999998999645883255544589743345699875102334332423789999999511004789
Q 001641 233 TLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRRE 312 (1039)
Q Consensus 233 ~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~g~r~kEg~~IN~SL~aLg~vI~aL~~~~~~~~ 312 (1039)
+|.+..... ......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|+++.
T Consensus 232 ~v~~~~~~~-------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~---- 294 (388)
T 3bfn_A 232 KVDQRERLA-------------PFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGL---- 294 (388)
T ss_dssp EEEEEESST-------------TCCEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTC----
T ss_pred EEEEECCCC-------------CCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC----
T ss_conf 999822688-------------873368899999898776655456755114777675063999999999996699----
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 97535899801333210279995067885339988898989999999999503237653244442589999999999999
Q 001641 313 GVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQ 392 (1039)
Q Consensus 313 ~~~vPyRdSkLTrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~fa~rar~IKNkPvvN~d~~~~ei~~Lr~ei~~Lk 392 (1039)
.||||||||||+||||+|||||+|+|||||||++.+++||++||+||+||++|+|+|++|.++....+..++. ++
T Consensus 295 -~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~l~~~k~----~~ 369 (388)
T 3bfn_A 295 -PRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHALGPVKL----SQ 369 (388)
T ss_dssp -SCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC-------------------------
T ss_pred -CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH----HH
T ss_conf -9886756588999998608996289999979850008999999999999851757673567899899988788----99
Q ss_pred HHHHH
Q ss_conf 99936
Q 001641 393 AELCA 397 (1039)
Q Consensus 393 ~eL~~ 397 (1039)
.+|..
T Consensus 370 ~~l~~ 374 (388)
T 3bfn_A 370 KELLG 374 (388)
T ss_dssp -----
T ss_pred HHHHC
T ss_conf 98617
No 4
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=730.24 Aligned_cols=347 Identities=41% Similarity=0.605 Sum_probs=298.5
Q ss_pred CCCCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEE--------------------ECCEEEEECEEECCC------CC
Q ss_conf 9996389997189996010049951799837986035--------------------476147702576899------98
Q 001641 6 ENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQ--------------------IGTHSFTFDHVYGNG------GS 59 (1039)
Q Consensus 6 ~~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~~~~v~--------------------~~~~~F~FD~Vf~~~------~s 59 (1039)
..++|+|+|||||+++.|...++..++.+.+....+. ...+.|+||+||+++ .+
T Consensus 36 ~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~~a 115 (443)
T 2owm_A 36 PGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEHYA 115 (443)
T ss_dssp CCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTTCC
T ss_pred CCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCC
T ss_conf 99894999993999968862699459997589862799558876543333321233667726852738278776776578
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC---CCCEEEEEEE
Q ss_conf 7731112242336987633888547753357887542026688898765553588999999999501---3651799960
Q 001641 60 PSSAMFGECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLR---HQMEFQLHVS 136 (1039)
Q Consensus 60 ~q~~vy~~~v~plV~~~l~G~N~tIlaYGqTgSGKTyTm~G~~~~~~~~GIipr~~~~LF~~i~~~~---~~~~~~v~vS 136 (1039)
+|++||+.++.|+|+++|+|||+||||||||||||||||+|+. ..+|||||++++||..|.... ....|.|+||
T Consensus 116 sQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~---~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS 192 (443)
T 2owm_A 116 TQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTP---DQPGLIPRTCEDLFQRIASAQDETPNISYNVKVS 192 (443)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCT---TSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCC---CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 7999987632468888636874279986788999988864687---7775379999999998876521367734999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 33222237854027854465434468898644589999146747999489649748991999999999982243763035
Q 001641 137 FIEILKEEVRDLLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGS 216 (1039)
Q Consensus 137 ~~EIynE~i~DLL~~~~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~ 216 (1039)
|+|||||.|+|||+|.... .....+.|+|++.++++|.|++++.|.|++|++.+|..|..+|++++
T Consensus 193 ~lEIYnE~i~DLL~~~~~~--------------~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~ 258 (443)
T 2owm_A 193 YFEVYNEHVRDLLAPVVPN--------------KPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVAS 258 (443)
T ss_dssp EEEEETTEEEETTSCCCSS--------------CCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCS
T ss_pred EEEEECCEEEECCCCCCCC--------------CCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf 9999889756856763457--------------86534430377999995268779982899999999999973378633
Q ss_pred CCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78888999844799999986431355799999999899964588325554458974334569987510233433242378
Q 001641 217 TNMNNQSSRSHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLA 296 (1039)
Q Consensus 217 t~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~g~r~kEg~~IN~SL~a 296 (1039)
|.||..|||||+||+|+|++...... ........|+|+|||||||||++++++.|.|++||.+||+||++
T Consensus 259 T~~N~~SSRSH~Ifti~v~~~~~~~~----------~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~a 328 (443)
T 2owm_A 259 TKMNDTSSRSHAVFTIMLKQIHHDLE----------TDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTT 328 (443)
T ss_dssp SSSSCBCTTEEEEEEEEEEEEC-----------------CCEEEEEEEEEECCCCCC--------------CCSSHHHHH
T ss_pred CCCCCCCCCCEEEEEEEEEEEECCCC----------CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHHH
T ss_conf 75877667771999999998603567----------88740688779999798875356567766412110010578999
Q ss_pred HHHHHHHHHHHCCC-----------------CCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 99999995110047-----------------8997535899801333210279995067885339988898989999999
Q 001641 297 LGNVISALGDEKKR-----------------REGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKY 359 (1039)
Q Consensus 297 Lg~vI~aL~~~~~~-----------------~~~~~vPyRdSkLTrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~f 359 (1039)
||+||.+|++.... +...||||||||||+||||+|||||+|+|||||||+ +++||++||+|
T Consensus 329 Lg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrf 406 (443)
T 2owm_A 329 LGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRY 406 (443)
T ss_dssp HHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHH
T ss_conf 9999999860455555444322234333445677745574547688888862799708999981643--07899999999
Q ss_pred HHHHHCCCCCCCCCC-CCCHHHH
Q ss_conf 999503237653244-4425899
Q 001641 360 ANRARNIQNKPVVNR-DLISSDM 381 (1039)
Q Consensus 360 a~rar~IKNkPvvN~-d~~~~ei 381 (1039)
|+||++|+|+|++|. |+.....
T Consensus 407 A~rak~I~n~~~vN~~d~~~~~~ 429 (443)
T 2owm_A 407 ADQAKRIRTRAVVNQVDGVSAAE 429 (443)
T ss_dssp HHHHTTCEECCCCCCC-------
T ss_pred HHHHHHCCCCCEECCCCCCCHHH
T ss_conf 99985445633351357766788
No 5
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=728.61 Aligned_cols=332 Identities=42% Similarity=0.655 Sum_probs=304.1
Q ss_pred CCCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEEC--------------CEEEEECEEECCCCCCCCCCCCCCCHHH
Q ss_conf 99638999718999601004995179983798603547--------------6147702576899987731112242336
Q 001641 7 NCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQIG--------------THSFTFDHVYGNGGSPSSAMFGECVAPL 72 (1039)
Q Consensus 7 ~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~~~~v~~~--------------~~~F~FD~Vf~~~~s~q~~vy~~~v~pl 72 (1039)
.++|+|+|||||++..|...++..|+.+.+...++.+. .+.|+||+||+++++ |++||+.++.|+
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~-Q~~Vy~~~~~pl 81 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSC-NYGIFQASFKPL 81 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCC-HHHHHHHTTHHH
T ss_pred CCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEECCCCC-HHHHHHHHHHHH
T ss_conf 9986999990979913320499538998499988999604554433445778527667889799761-068998789999
Q ss_pred HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCC
Q ss_conf 98763388854775335788754202668889876555358899999999950136517999603322223785402785
Q 001641 73 VDGLFQGYNATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSV 152 (1039)
Q Consensus 73 V~~~l~G~N~tIlaYGqTgSGKTyTm~G~~~~~~~~GIipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~ 152 (1039)
|+++|+|||+||||||||||||||||+|+. ..+|||||++++||..+........|.|++||+|||||+|+|||++.
T Consensus 82 v~~~l~G~n~tifAYGqTGSGKTyTm~G~~---~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~ 158 (350)
T 2vvg_A 82 IDAVLEGFNSTIFAYGQTGAGKTWTMGGNK---EEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKNN 158 (350)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHHTBCS---SSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTTE
T ss_pred HHHHHCCCCEEEEEECCCCCCCCEEEECCC---CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCCC
T ss_conf 999857885268864689999987853587---66755889999999999865368757999999999287888855677
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 44654344688986445899991467479994896497489919999999999822437630357888899984479999
Q 001641 153 SVSKSVTANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTI 232 (1039)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~t~~N~~SSRSH~Ifti 232 (1039)
..+.|+|++.++++|.|++++.|.|++|++.+|..|..+|++++|.||..|||||+||+|
T Consensus 159 --------------------~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i 218 (350)
T 2vvg_A 159 --------------------TKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMV 218 (350)
T ss_dssp --------------------EEECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEE
T ss_pred --------------------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
T ss_conf --------------------684256748998881587799749999999999999841460014578888765299999
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99864313557999999998999645883255544589743345699875102334332423789999999511004789
Q 001641 233 TLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRRE 312 (1039)
Q Consensus 233 ~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~g~r~kEg~~IN~SL~aLg~vI~aL~~~~~~~~ 312 (1039)
+|++.... +.......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|++++
T Consensus 219 ~v~~~~~~------------~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~---- 282 (350)
T 2vvg_A 219 RIECSEVI------------ENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGA---- 282 (350)
T ss_dssp EEEEEEC----------------CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHHTC----
T ss_pred EEEEEECC------------CCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----
T ss_conf 99995046------------78761788999999689887554456507788999887589999999999997389----
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf 9753589980133321027999506788533998889898999999999950323765324444258
Q 001641 313 GVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISS 379 (1039)
Q Consensus 313 ~~~vPyRdSkLTrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~fa~rar~IKNkPvvN~d~~~~ 379 (1039)
.||||||||||+||||+|||||+|+|||||||+..+++||++||+||+||++|+|+|++|.|+...
T Consensus 283 -~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~~ 348 (350)
T 2vvg_A 283 -THIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPKDA 348 (350)
T ss_dssp -SSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTTC
T ss_pred -CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHHC
T ss_conf -988764558889989860899628999996884001899999999999985445666125782010
No 6
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=726.49 Aligned_cols=339 Identities=40% Similarity=0.619 Sum_probs=307.5
Q ss_pred CCCCCCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEE----CCEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 9999963899971899960100499517998379860354----761477025768999877311122423369876338
Q 001641 4 ASENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI----GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQG 79 (1039)
Q Consensus 4 ~~~~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~~~~v~~----~~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~~l~G 79 (1039)
++..++|+|+|||||++..|...++..|+.+.+... +.+ ..+.|+||+||+++++ |++||+.++.|+|+++|+|
T Consensus 2 s~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~-~~~~~~~~~~~f~FD~Vf~~~~~-Q~~Vy~~~~~plv~~~l~G 79 (355)
T 1goj_A 2 SSSANSIKVVARFRPQNRVEIESGGQPIVTFQGPDT-CTVDSKEAQGSFTFDRVFDMSCK-QSDIFDFSIKPTVDDILNG 79 (355)
T ss_dssp CCSSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTE-EEECSTTCCEEEECSEEECTTCC-HHHHHHHHTHHHHHHHTTT
T ss_pred CCCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCE-EEECCCCCCCEEEECEEECCCCC-CHHHHHHHHHHHHHHHHCC
T ss_conf 989998699998899995785069963999869984-99726897527761959899876-2799999999999998579
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 885477533578875420266888-9876555358899999999950136517999603322223785402785446543
Q 001641 80 YNATVLAYGQTGSGKTYTMGTGLR-EGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSV 158 (1039)
Q Consensus 80 ~N~tIlaYGqTgSGKTyTm~G~~~-~~~~~GIipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~~ 158 (1039)
||+||||||||||||||||+|+.. +...+|||||++++||..+.......+|.|+|||+|||||+|+|||+|..
T Consensus 80 ~n~tifAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~----- 154 (355)
T 1goj_A 80 YNGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQN----- 154 (355)
T ss_dssp CCEEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTC-----
T ss_pred CCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC-----
T ss_conf 822288889999986067515788776668706799999999987145685089999999997897788445766-----
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEE
Q ss_conf 44688986445899991467479994896497489919999999999822437630357888899984479999998643
Q 001641 159 TANGHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMR 238 (1039)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~t~~N~~SSRSH~Ifti~i~q~~ 238 (1039)
..+.|+|++.++++|.|++++.|.|++|++.+|..|..+|.+++|.||..|||||+||+|+|.+..
T Consensus 155 --------------~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~ 220 (355)
T 1goj_A 155 --------------DNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKN 220 (355)
T ss_dssp --------------CSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEE
T ss_pred --------------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEC
T ss_conf --------------785268858999960687799579999999999999752472334478987776099999999960
Q ss_pred ECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 13557999999998999645883255544589743345699875102334332423789999999511004789975358
Q 001641 239 KLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPY 318 (1039)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~g~r~kEg~~IN~SL~aLg~vI~aL~~~~~~~~~~~vPy 318 (1039)
.. ......|+|+|||||||||++++++.|.+++|+.+||+||++||+||.+|++++ ..||||
T Consensus 221 ~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~----~~hvPy 282 (355)
T 1goj_A 221 VE--------------TGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGK----SSHVPY 282 (355)
T ss_dssp TT--------------TTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCS----CSCCCG
T ss_pred CC--------------CCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCC
T ss_conf 68--------------895566579999898877443246602667888765167999999999986489----998877
Q ss_pred CCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf 998013332102799950678853399888989899999999995032376532444425899
Q 001641 319 RDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDM 381 (1039)
Q Consensus 319 RdSkLTrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~fa~rar~IKNkPvvN~d~~~~ei 381 (1039)
||||||+||||+|||||+|+|||||||++.+++||++||+||+||++|+|+|++|.++...++
T Consensus 283 RdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~~l 345 (355)
T 1goj_A 283 RDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPAEL 345 (355)
T ss_dssp GGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCSSS
T ss_pred CCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHH
T ss_conf 557999999997289976899999796302699999999999997236677556787999999
No 7
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=725.16 Aligned_cols=348 Identities=35% Similarity=0.564 Sum_probs=309.7
Q ss_pred CCCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEE-----CCEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 9963899971899960100499517998379860354-----76147702576899987731112242336987633888
Q 001641 7 NCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI-----GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYN 81 (1039)
Q Consensus 7 ~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~~~~v~~-----~~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~~l~G~N 81 (1039)
.++|+|+|||||++..|...++..++.. .+...+.. ..+.|+||+||+++++ |++||+. +.|+|+++|+|||
T Consensus 4 ~~~i~V~vRvRP~~~~E~~~~~~~~~~~-~~~~~v~~~~~~~~~~~f~FD~Vf~~~~~-Q~~Vy~~-~~~lv~~~l~G~n 80 (369)
T 3cob_A 4 KGKIRVYCRLRPLCEKEIIAKERNAIRS-VDEFTVEHLWKDDKAKQHMYDRVFDGNAT-QDDVFED-TKYLVQSAVDGYN 80 (369)
T ss_dssp CCBCEEEEEECCCCHHHHHTTCCBCEEE-CSSSEEEEECTTSCEEEEECSEEECTTCC-HHHHHHT-TTHHHHHHHTTCE
T ss_pred CCCEEEEEECCCCCHHHCCCCCCEEEEC-CCCEEEEECCCCCCCEEEECCEEECCCCC-CCEEHHH-HHHHHHHHHCCCC
T ss_conf 9984999987999834546798379976-99679993378998268865989899997-3140221-3132576646971
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 54775335788754202668889876555358899999999950136517999603322223785402785446543446
Q 001641 82 ATVLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTAN 161 (1039)
Q Consensus 82 ~tIlaYGqTgSGKTyTm~G~~~~~~~~GIipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~~~~~ 161 (1039)
+||||||||||||||||+|+. ..+|||||++.+||..+........|.|++||+|||||.|+|||+|...
T Consensus 81 ~tifAYGqTGSGKTyTM~G~~---~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~------- 150 (369)
T 3cob_A 81 VCIFAYGQTGSGKTFTIYGAD---SNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA------- 150 (369)
T ss_dssp EEEEEEECTTSSHHHHHTBCS---SSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSS-------
T ss_pred EEEEEECCCCCCCEEEECCCC---CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCC-------
T ss_conf 599987899998837511799---8886258999999999874135752677899987707632345787556-------
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECC
Q ss_conf 88986445899991467479994896497489919999999999822437630357888899984479999998643135
Q 001641 162 GHAGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLH 241 (1039)
Q Consensus 162 ~~~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~t~~N~~SSRSH~Ifti~i~q~~~~~ 241 (1039)
....+.|++++.++++|.|++++.|.|+++++.+|..|..+|++++|.||..|||||+||+|+|++....
T Consensus 151 ---------~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~- 220 (369)
T 3cob_A 151 ---------KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ- 220 (369)
T ss_dssp ---------CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT-
T ss_pred ---------CCCCEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCC-
T ss_conf ---------7764278997999888059879980899999999998752552303447787776338999999985278-
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 57999999998999645883255544589743345699875102334332423789999999511004789975358998
Q 001641 242 SVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDS 321 (1039)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~g~r~kEg~~IN~SL~aLg~vI~aL~~~~~~~~~~~vPyRdS 321 (1039)
......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|+++. .|||||||
T Consensus 221 -------------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~-----~hvPyRdS 282 (369)
T 3cob_A 221 -------------TQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGN-----QHIPYRNH 282 (369)
T ss_dssp -------------TCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SCCCGGGC
T ss_pred -------------CCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCCCCC
T ss_conf -------------772788899999688787544347630234778787788999999999986489-----96787477
Q ss_pred CHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0133321027999506788533998889898999999999950323765324444258999999999999999936
Q 001641 322 KLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISSDMQKLRQQLKYLQAELCA 397 (1039)
Q Consensus 322 kLTrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~fa~rar~IKNkPvvN~d~~~~ei~~Lr~ei~~Lk~eL~~ 397 (1039)
|||+||||+|||||+|+|||||||+..+++||++||+||+||++|+|+|.+|.++ .++.+|+.++..++.++..
T Consensus 283 kLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~--~ei~~L~~~l~~~~~~~~~ 356 (369)
T 3cob_A 283 KLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS--KEVARLKKLVSYWKEQAGR 356 (369)
T ss_dssp HHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC--HHHHHHHHHTTCC------
T ss_pred HHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHHHHHHHHHCCC
T ss_conf 7788788762898527999994772002899999999999986545677415788--9999999999999976479
No 8
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=722.51 Aligned_cols=336 Identities=40% Similarity=0.625 Sum_probs=300.6
Q ss_pred CCCCCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEE---------CCEEEEECEEECCCCCCCCCCCCCCCHHHHHH
Q ss_conf 999963899971899960100499517998379860354---------76147702576899987731112242336987
Q 001641 5 SENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI---------GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDG 75 (1039)
Q Consensus 5 ~~~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~~~~v~~---------~~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~ 75 (1039)
...++|+|+|||||++..|...++..++.+.+....+.+ ..+.|+||+||+++++ |++||+.++.|+|++
T Consensus 5 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~~-Q~~Vy~~~~~plv~~ 83 (359)
T 1x88_A 5 EKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTK-QIDVYRSVVCPILDE 83 (359)
T ss_dssp ----CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCC-HHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECEEEEECCCC-HHHHHHHHHHHHHHH
T ss_conf 8999859999908999256304996499975998579983787667767448754079852674-537899998886898
Q ss_pred HHCCCCCCEEEECCCCCCCCCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHH
Q ss_conf 63388854775335788754202668889--------8765553588999999999501365179996033222237854
Q 001641 76 LFQGYNATVLAYGQTGSGKTYTMGTGLRE--------GFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRD 147 (1039)
Q Consensus 76 ~l~G~N~tIlaYGqTgSGKTyTm~G~~~~--------~~~~GIipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~D 147 (1039)
+|+|||+||||||||||||||||+|+... ...+|||||++++||..+.. ...+|.|+|||+|||||+|+|
T Consensus 84 ~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~v~vS~~EIYnE~i~D 161 (359)
T 1x88_A 84 VIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTD--NGTEFSVKVSLLEIYNEELFD 161 (359)
T ss_dssp HHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSS--SSEEEEEEEEEEEEETTEEEE
T ss_pred HHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCEEEEEEEEEEEECCEEEE
T ss_conf 737982489984789998756885667766544444566687038999999987741--582599999999995761001
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC--CCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 02785446543446889864458999914674799--9489649748991999999999982243763035788889998
Q 001641 148 LLDSVSVSKSVTANGHAGKVSISGRPPIQIRESSN--GVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSR 225 (1039)
Q Consensus 148 LL~~~~~~~~~~~~~~~~~~~~~~~~~l~i~e~~~--~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~t~~N~~SSR 225 (1039)
||+|... ....+.+++++. ++++|.|++++.|.|++|++.+|..|..+|.+++|.||..|||
T Consensus 162 LL~~~~~----------------~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSR 225 (359)
T 1x88_A 162 LLNPSSD----------------VSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSR 225 (359)
T ss_dssp TTCTTSC----------------TTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHH
T ss_pred HHCCCCC----------------CCCCCEEEECCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 2115655----------------566605886557789889828789984999999999998775146122547787777
Q ss_pred CEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44799999986431355799999999899964588325554458974334569987510233433242378999999951
Q 001641 226 SHAIFTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALG 305 (1039)
Q Consensus 226 SH~Ifti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~g~r~kEg~~IN~SL~aLg~vI~aL~ 305 (1039)
||+||+|+|++..... +.......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|+
T Consensus 226 SH~if~i~i~~~~~~~-----------~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~ 294 (359)
T 1x88_A 226 SHSVFSVTIHMKETTI-----------DGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALV 294 (359)
T ss_dssp CEEEEEEEEEEEEECT-----------TSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEEECCCC-----------CCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6289999998743557-----------88713778899998189987354358863201777653078999999999986
Q ss_pred HHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 1004789975358998013332102799950678853399888989899999999995032376532444
Q 001641 306 DEKKRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRD 375 (1039)
Q Consensus 306 ~~~~~~~~~~vPyRdSkLTrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~fa~rar~IKNkPvvN~d 375 (1039)
++. .||||||||||+||||+|||||+|+|||||||+..+++||++||+||+||++|+|+|+||++
T Consensus 295 ~~~-----~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 295 ERT-----PHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQK 359 (359)
T ss_dssp TTC-----SCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC----
T ss_pred CCC-----CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 479-----97762256688999997589972999999789745689999999999998656676614779
No 9
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=718.63 Aligned_cols=338 Identities=42% Similarity=0.633 Sum_probs=300.1
Q ss_pred CCCCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEE--CCEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 99963899971899960100499517998379860354--7614770257689998773111224233698763388854
Q 001641 6 ENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI--GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQGYNAT 83 (1039)
Q Consensus 6 ~~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~~~~v~~--~~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~~l~G~N~t 83 (1039)
+.++|+|+|||||++..|...+...++.+......+.. +.+.|+||+||+++++ |++||+.++.|+|+++|+|||+|
T Consensus 2 e~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~F~FD~Vf~~~~t-Q~~Vy~~~~~plv~~~l~G~n~t 80 (349)
T 1t5c_A 2 EEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNET-TKNVYEEIAAPIIDSAIQGYNGT 80 (349)
T ss_dssp -CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEEETTSSCEEECSCEECTTSC-HHHHHHHTTHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEECCCCCHHHHCCCCCCEEEEECCCCEEEECCCCEEEECCEEECCCCC-HHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 98997999988988915642599747999589976997799828878979899999-89999999899999987488640
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 77533578875420266888987655535889999999995013651799960332222378540278544654344688
Q 001641 84 VLAYGQTGSGKTYTMGTGLREGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDSVSVSKSVTANGH 163 (1039)
Q Consensus 84 IlaYGqTgSGKTyTm~G~~~~~~~~GIipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~~~~~~~~~~~~~ 163 (1039)
|||||||||||||||+|+ ...+|||||++++||..+... ....|.|+|||+|||||+|+|||++..
T Consensus 81 ifAYGqTGSGKTyTM~G~---~~~~Giipr~~~~lF~~i~~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~---------- 146 (349)
T 1t5c_A 81 IFAYGQTASGKTYTMMGS---EDHLGVIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLLCGTQ---------- 146 (349)
T ss_dssp EEEEESTTSSHHHHHTBC---SSSBCHHHHHHHHHHHHGGGC-TTEEEEEEEEEEEEETTEEEESSSSSC----------
T ss_pred EEEECCCCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEEEEEEECCEEEECCCCCC----------
T ss_conf 562158999987687468---888745889999999999747-688679998899984877788667877----------
Q ss_pred CCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCC
Q ss_conf 98644589999146747999489649748991999999999982243763035788889998447999999864313557
Q 001641 164 AGKVSISGRPPIQIRESSNGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSV 243 (1039)
Q Consensus 164 ~~~~~~~~~~~l~i~e~~~~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~t~~N~~SSRSH~Ifti~i~q~~~~~~~ 243 (1039)
...++.|+|++.++++|.|++++.|.|++|++.+|..|..+|.+++|.||..|||||+||+|.|++......
T Consensus 147 -------~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~- 218 (349)
T 1t5c_A 147 -------KMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEP- 218 (349)
T ss_dssp -------TTCCEEEEETTTTEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC---
T ss_pred -------CCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC-
T ss_conf -------787746998899998744887998689999999999752334523365778888763999999998516887-
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf 99999999899964588325554458974334569987510233433242378999999951100478997535899801
Q 001641 244 SPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRREGVHVPYRDSKL 323 (1039)
Q Consensus 244 ~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~g~r~kEg~~IN~SL~aLg~vI~aL~~~~~~~~~~~vPyRdSkL 323 (1039)
.........|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|+++++ ..|||||||||
T Consensus 219 --------~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~---~~hvPyRdSkL 287 (349)
T 1t5c_A 219 --------SNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQV---GGFINYRDSKL 287 (349)
T ss_dssp -------------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCC---TTSSCGGGSHH
T ss_pred --------CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCHH
T ss_conf --------6767637899999997998753221478641113354776899999999999855687---77776556377
Q ss_pred HHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf 33321027999506788533998889898999999999950323765324444258
Q 001641 324 TRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLISS 379 (1039)
Q Consensus 324 TrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~fa~rar~IKNkPvvN~d~~~~ 379 (1039)
|+||||+|||||+|+|||||||+ +++||++||+||+||++|+|+|++|.++...
T Consensus 288 T~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~~~ 341 (349)
T 1t5c_A 288 TRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTDE 341 (349)
T ss_dssp HHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC---
T ss_pred HHHHHHHCCCCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf 89999861899629999994777--7899999999999974536676536678888
No 10
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=716.67 Aligned_cols=334 Identities=42% Similarity=0.676 Sum_probs=297.1
Q ss_pred CCCCEEEEEEECCCCCCHHCCCCCEEEEEECCCCCEEE------CCEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 99963899971899960100499517998379860354------761477025768999877311122423369876338
Q 001641 6 ENCSVKVAVHVRPLIGDERAQGCKECVAVTHGNPQVQI------GTHSFTFDHVYGNGGSPSSAMFGECVAPLVDGLFQG 79 (1039)
Q Consensus 6 ~~~~v~V~vRiRP~~~~E~~~~~~~~v~v~~~~~~v~~------~~~~F~FD~Vf~~~~s~q~~vy~~~v~plV~~~l~G 79 (1039)
..++|+|+|||||++..|...++..|+.+......+.. ..+.|+||+||+++++ |++||+.++.|+|+++|+|
T Consensus 21 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~~~-Q~~Vy~~~~~plv~~~l~G 99 (373)
T 2wbe_C 21 SNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPREVVTRHTLDSKLTKKFTFDRSFGPESK-QCDVYSVVVSPLIEEVLNG 99 (373)
T ss_dssp CCEECEEEEEECCCCHHHHHHTCCBCEEEETTTEEEESSSSSSTTCEEEECSEEECTTCC-HHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCCCCCCCEEEECCEEECCCCC-HHHHHHHHHHHHHHHHHCC
T ss_conf 899969999829899145055898569984898699826778888569863489524660-6679999999999987479
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCC--------CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCC
Q ss_conf 885477533578875420266888--------987655535889999999995013651799960332222378540278
Q 001641 80 YNATVLAYGQTGSGKTYTMGTGLR--------EGFQTGLIPQVMNALFNKIETLRHQMEFQLHVSFIEILKEEVRDLLDS 151 (1039)
Q Consensus 80 ~N~tIlaYGqTgSGKTyTm~G~~~--------~~~~~GIipr~~~~LF~~i~~~~~~~~~~v~vS~~EIynE~i~DLL~~ 151 (1039)
||+||||||||||||||||+|+.. +...+|||||++.+||..+... ..+|.|+|||+|||||+|+|||++
T Consensus 100 ~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~--~~~~~v~vS~~EIYnE~i~DLL~~ 177 (373)
T 2wbe_C 100 YNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMM--EVEYTMRISYLELYNEELCDLLST 177 (373)
T ss_dssp CCEEEEEECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHHHHHHHC--CSCEEEEEEEEEEETTEEEESSCT
T ss_pred CEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCEEEEEEEEEEEECCEEEECCCC
T ss_conf 468999526888983152323765443334455678867699999999998725--862999999999867767897789
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECC--CCCEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 544654344688986445899991467479--994896497489919999999999822437630357888899984479
Q 001641 152 VSVSKSVTANGHAGKVSISGRPPIQIRESS--NGVITLAGSTEVAVNTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAI 229 (1039)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~i~e~~--~~~~~v~glte~~V~s~~e~~~~L~~g~~~R~~~~t~~N~~SSRSH~I 229 (1039)
.. ...+.+++++ .|+++|.|++++.|.|++|++.+|..|..+|++++|.||..|||||+|
T Consensus 178 ~~------------------~~~l~i~~~~~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~i 239 (373)
T 2wbe_C 178 DD------------------TTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTV 239 (373)
T ss_dssp TS------------------CSCCCEEECSSSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEE
T ss_pred CC------------------CCCCEEEECCCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
T ss_conf 87------------------777246741577895783686687069999999999998633043114388888886189
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999998643135579999999989996458832555445897433456998-7510233433242378999999951100
Q 001641 230 FTITLEQMRKLHSVSPDNGTPDEDMDEEYFCAKLHLVDLAGSERAKRTGSD-GLRLKEGIHINRGLLALGNVISALGDEK 308 (1039)
Q Consensus 230 fti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~a~-g~r~kEg~~IN~SL~aLg~vI~aL~~~~ 308 (1039)
|+|+|++.... .+.......|+|+|||||||||++++++. |.|++|+.+||+||++||+||.+|++..
T Consensus 240 f~i~v~~~~~~-----------~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~ 308 (373)
T 2wbe_C 240 FSIVVHIRENG-----------IEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRA 308 (373)
T ss_dssp EEEEEEECTTC-----------TTTCCEEEEEEEEEEECCCC--------------------CHHHHHHHHHHHHHHHCS
T ss_pred EEEEEEEECCC-----------CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999996578-----------8887425589999997998874632367656314678888888999999999997179
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 47899753589980133321027999506788533998889898999999999950323765324444
Q 001641 309 KRREGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDL 376 (1039)
Q Consensus 309 ~~~~~~~vPyRdSkLTrLLqdsLgGns~t~mIa~vSP~~~~~~ETl~TL~fa~rar~IKNkPvvN~d~ 376 (1039)
.||||||||||+||||+|||||+|+|||||||+..+++||++||+||+||++|+|+|++|.+.
T Consensus 309 -----~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~~~ 371 (373)
T 2wbe_C 309 -----PHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKL 371 (373)
T ss_dssp -----SCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEECCCCCEEC
T ss_pred -----CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf -----957621656889999873899609999996997345899999999999986566654333315
Done!