BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001643
(1038 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NUJ3|T11L1_HUMAN T-complex protein 11-like protein 1 OS=Homo sapiens GN=TCP11L1 PE=1
SV=1
Length = 509
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 718 NIIKAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLVREVRDEICGM---APQSWKEEIT 774
N +K +++E + KAFWD ++ + + YD I+LV E+++ + + +IT
Sbjct: 98 NSLKKRVKEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQIT 157
Query: 775 EAIDPEILSQVLSSGSLDIDYLGRILEFALTTLQKLSAPANDDDMKANHQRLLKELAEIC 834
E +D +++ Q +G+LDI ++ EF + + L APA D+++K LK++ EI
Sbjct: 158 EVLDLDLIKQEAENGALDI---SKLAEFIIGMMGTLCAPARDEEVKK-----LKDIKEIV 209
Query: 835 QIRDESNYSHVNAM-IKGLRFVLEQIRA--LQQEIIRARMRMMEPFLKGPAGLEYL 887
+ E +S ++ M + F + IR +QQ + R + E + P L+++
Sbjct: 210 PLFREI-FSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEILERQPNSLDFV 264
>sp|Q8BTG3|T11L1_MOUSE T-complex protein 11-like protein 1 OS=Mus musculus GN=Tcp11l1 PE=2
SV=1
Length = 509
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 720 IKAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLVREVRDEICGM---APQSWKEEITEA 776
++ +++E + KAFWD ++ + + YD I+LV E+++ + + +ITE
Sbjct: 100 LEKRVKEIVHKAFWDCLSVQLSEEPPTYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEV 159
Query: 777 IDPEILSQVLSSGSLDIDYLGRILEFALTTLQKLSAPANDDDMKANHQRLLKELAEICQI 836
+D E++ Q +G+LDI L EF + + L APA D+++K LK + EI +
Sbjct: 160 LDLELIKQEAENGALDISKLA---EFIIGMMGILCAPARDEEVKK-----LKGIKEIVPL 211
Query: 837 RDESNYSHVNAM-IKGLRFVLEQIRA--LQQEIIRARMRMMEPFLKGPAGLEY 886
+ +S ++ M + F + IR +QQ + R + E + P L++
Sbjct: 212 F-RAIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERRKFQEVLERQPNSLDF 263
>sp|Q8WWU5|TCP11_HUMAN T-complex protein 11 homolog OS=Homo sapiens GN=TCP11 PE=2 SV=1
Length = 503
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 717 PNIIKAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLVREVRDEICG-MAPQS--WKEEI 773
P+ ++ K++ET+ AFWD + E + ++ ++L++E+++ + + P+ + EI
Sbjct: 77 PSSLEGKVKETVHNAFWDHLKEQLSATPPDFSCALELLKEIKEILLSLLLPRQNRLRIEI 136
Query: 774 TEAIDPEILSQVLSSGSLDIDYLGRILEFALTTLQKLSAPANDDDMKA--NHQRLLKELA 831
EA+D ++L Q G+L + YL + + L + L AP D+ ++ N + L
Sbjct: 137 EEALDMDLLKQEAEHGALKVLYLSK---YVLNMMALLCAPVRDEAVQKLENITDPVWLLR 193
Query: 832 EICQIRDESNYSHVNAMIKGLRFVLEQIRALQQEIIRARMRMMEPFLKGPAGLEYLRKGF 891
I Q+ VN I+ L+ L++ ++Q E R + E K P+ L + K
Sbjct: 194 GIFQVLGRMKMDMVNYTIQSLQPHLQE-HSIQYE----RAKFQELLNKQPSLLNHTTKWL 248
Query: 892 ADRYG-----PPSDAHTS 904
G PP+ TS
Sbjct: 249 TQAAGDLTMSPPTCPDTS 266
>sp|A7Z033|T11L2_BOVIN T-complex protein 11-like protein 2 OS=Bos taurus GN=TCP11L2 PE=2
SV=1
Length = 519
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 720 IKAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLVREVRDEICG-MAPQS--WKEEITEA 776
+ ++R + +AFWD + + Y+ I+L E+R+ + + P + +I E
Sbjct: 99 LAGRVRHIVHQAFWDVLESELNAEPPEYEHAIKLFEEIREILLSFLTPGGNRLRNQICEV 158
Query: 777 IDPEILSQVLSSGSLDIDYLGRILEFALTTLQKLSAPANDDD---MKANHQRLLKELAEI 833
+D +++ Q ++DI L + ++T+ KL AP DDD +KA +++ L +I
Sbjct: 159 LDTDLIRQQAEHSAVDIQGLAN---YVISTMGKLCAPVRDDDIRELKAT-SNIVEVLRQI 214
Query: 834 CQIRDESNYSHVNAMIKGLR 853
+ D VN I+ LR
Sbjct: 215 FHVLDLMKMDMVNFTIRSLR 234
>sp|Q01755|TCP11_MOUSE T-complex protein 11 OS=Mus musculus GN=Tcp11 PE=2 SV=1
Length = 566
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 721 KAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLVREVRDEICGMA-PQS--WKEEITEAI 777
K K+++TM FW+ + E + ++ ++L++E+++ + + P+ K EI EA+
Sbjct: 145 KGKVKDTMPSDFWEHLNEQLSAVPPDFSCALELLKEIKEILLSLLLPRQSRLKNEIEEAL 204
Query: 778 DPEILSQVLSSGSLDIDYLGRILEFALTTLQKLSAPANDDDMK--ANHQRLLKELAEICQ 835
D E L Q G L++ YL + + L + L AP D+ ++ N ++ L I Q
Sbjct: 205 DMEFLQQQADRGDLNVSYLSK---YILNMMVLLCAPIRDEAVQRLENISDPVRLLRGIFQ 261
Query: 836 IRDESNYSHVNAMIKGLRFVLEQ 858
+ + VN I+ L+ L++
Sbjct: 262 VLGQMKMDMVNYTIQSLQPQLQE 284
>sp|Q568Z0|T11L2_RAT T-complex protein 11-like protein 2 OS=Rattus norvegicus GN=Tcp11l2
PE=2 SV=1
Length = 517
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 105/231 (45%), Gaps = 29/231 (12%)
Query: 718 NIIKAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLVREVRDEICG-MAPQS--WKEEIT 774
N + +++ + +AFWD + + Y+ I+L E+R+ + + P +I
Sbjct: 97 NSLAGQVKRVVHQAFWDVLEADLSAEPPQYEYAIKLFEEIREILLSFLTPGGNRLHSQIC 156
Query: 775 EAIDPEILSQVLSSGSLDIDYLGRILEFALTTLQKLSAPANDDD---MKANHQRLLKELA 831
E +D +++ Q ++DI L + ++T+ K+ AP D+D +KA +++ L
Sbjct: 157 EVLDIDLIRQQAEHSAVDIQGLAN---YVISTMGKICAPVRDEDIRELKAT-TNIVEMLR 212
Query: 832 EICQIRDESNYSHVNAMIKGLRFVLEQIRALQQEIIRA-RMRMMEPFLKGPAGL----EY 886
+I ++ D N +I+ +R +Q ++ R + E + P L E+
Sbjct: 213 QIFRVLDLMRMDMTNFVIRNIR------PHIQHHLVEYERNKFQEVLEETPNALSQTTEW 266
Query: 887 LRKG-----FADRYGPPSDAHTSLPVTLQWLSSILTC--KDYEWEEHKSSL 930
L++ F++ P H+S P +L L+ + C K +W+ K+ L
Sbjct: 267 LKESIDKELFSETDVAPGAEHSSTP-SLSPLTVLNNCYLKLLQWDYQKNVL 316
>sp|Q5XI00|TCP11_RAT T-complex protein 11 homolog OS=Rattus norvegicus GN=Tcp11 PE=2
SV=1
Length = 566
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 695 INEYVHNQHYAAFDIFTVNNEKPNIIKAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLV 754
+ E VH+ + D + + + ++++ +E M FWD + E + ++ ++L+
Sbjct: 121 LTERVHDA--SKLDCHLEDRKSASSLESRGKEVMPSDFWDHLKEQLSAVPPDFSCALELL 178
Query: 755 REVRDEICGMA-PQS--WKEEITEAIDPEILSQVLSSGSLDIDYLGRILEFALTTLQKLS 811
+E+++ + + P+ + EI EA+D E L Q G L++ YL + + L + L
Sbjct: 179 KEIKEILLSLLLPRQSRLRNEIEEALDMEFLHQQADRGDLNVSYLSK---YILNMMVLLC 235
Query: 812 APANDDDMK--ANHQRLLKELAEICQIRDESNYSHVNAMIKGLRFVLEQ 858
AP D+ ++ N ++ L I Q+ + VN I+ L+ L++
Sbjct: 236 APVRDEAVQRLENISDPVRLLRGIFQVLGQMKMDMVNYTIQSLQPQLQE 284
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 47.0 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 122 KAQKRLARLDELRQAAKTGVEMRFEKEREMLGSKVESRVQKAEANRMLILKAYSQRRDKL 181
+ Q+RL + +EL++ +E+E L + + ++QK E LK Q R +
Sbjct: 2742 QEQERLQKEEELKR-----------QEQERLEREKQEQLQKEEE-----LKRQEQERLQK 2785
Query: 182 KERSSQSLLRRMTRESKYKERVRAAIHQKRLAAEKKRLGLLEAEKKKARARMLQVRRVAK 241
+E + R+ +E + K + Q+RL EK+ E E K+ LQ K
Sbjct: 2786 EEALKRQEQERLQKEEELKRQ-----EQERLEREKQEQLQKEEELKRQEQERLQKEEALK 2840
Query: 242 FVSHQREVERRKMREQLEDRLQRAK---RQRAEYLRQRARLHTVRINWNRMDKQADVLSR 298
+R + +++ Q ++RL+R K +R ++++ + V+I + + K+ D + +
Sbjct: 2841 RQEQERLQKEEELKRQEQERLERKKIELAEREQHIKSKLESDMVKIIKDELTKEKDEIIK 2900
Query: 299 ----KLARCWRQ-FLKHRRSTLELA------RSYDALKINEMSVKS 333
KL Q +LKH ++ L L ++ + +K NE +K+
Sbjct: 2901 NKDIKLRHSLEQKWLKHLQNILSLKIDSLLNKNDEVIKDNETQLKT 2946
Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 5/144 (3%)
Query: 190 LRRMTRESKYKERVRAAIHQKRLAAEKKRLGLLEAEKKKARARMLQVRRVAKFVSHQREV 249
L+R +E KE Q+RL EK+ E E K+ LQ K +R
Sbjct: 2739 LKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQ 2798
Query: 250 ERRKMREQLEDRLQRAKRQRAEYLRQRARLHTVRINWNRMDKQADVLSRKLARCWRQFLK 309
+ +++ Q ++RL+R K+ E L++ L R R+ K+ + ++ R ++
Sbjct: 2799 KEEELKRQEQERLEREKQ---EQLQKEEELK--RQEQERLQKEEALKRQEQERLQKEEEL 2853
Query: 310 HRRSTLELARSYDALKINEMSVKS 333
R+ L R L E +KS
Sbjct: 2854 KRQEQERLERKKIELAEREQHIKS 2877
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 26/170 (15%)
Query: 103 QRLEAKLQAAQQKRLSILAKAQKRLARLDELRQAAKTGVEMRFEKEREMLGSKVESRVQK 162
+RLE + Q QK + + Q+RL + + L++ + R +KE E L + + R+++
Sbjct: 2759 ERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQE----RLQKEEE-LKRQEQERLER 2813
Query: 163 AEANRMLILKAYSQRRDKLKERSSQSL-----LRRMTRESKYKERVRAAIHQKRLAAEKK 217
+ ++ Q+ ++LK + + L L+R +E KE Q+RL E+K
Sbjct: 2814 EKQEQL-------QKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERL--ERK 2864
Query: 218 RLGLLEAE---KKKARARMLQVRRVAKFVSHQREVERR---KMREQLEDR 261
++ L E E K K + M+++ + + + E+ + K+R LE +
Sbjct: 2865 KIELAEREQHIKSKLESDMVKIIK-DELTKEKDEIIKNKDIKLRHSLEQK 2913
>sp|Q8K1H7|T11L2_MOUSE T-complex protein 11-like protein 2 OS=Mus musculus GN=Tcp11l2 PE=2
SV=1
Length = 517
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 718 NIIKAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLVREVRDEICG-MAPQS--WKEEIT 774
N + +++ + +AFWD + + Y+ I+L E+R+ + + P +I
Sbjct: 97 NSLAGQVKRVVHQAFWDVLEADLSAEPPQYEYAIKLFEEIREILLSFLTPGGNRLHSQIC 156
Query: 775 EAIDPEILSQVLSSGSLDIDYLGRILEFALTTLQKLSAPANDDD---MKANHQRLLKELA 831
E +D +++ Q ++DI L + +TT+ K+ AP D+D +KA +++ L
Sbjct: 157 EVLDIDLIRQQAEHSAVDIQGLAN---YVITTMGKICAPVRDEDIRELKAT-TNIVEMLR 212
Query: 832 EICQIRDESNYSHVNAMIKGLR 853
+I ++ D +N +I+ +R
Sbjct: 213 QIFRVLDLMRMDMMNFVIRNIR 234
>sp|Q8N4U5|T11L2_HUMAN T-complex protein 11-like protein 2 OS=Homo sapiens GN=TCP11L2 PE=2
SV=1
Length = 519
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 720 IKAKIRETMEKAFWDGIAESVKQGEHNYDRIIQLVREVRDEICG-MAPQS--WKEEITEA 776
+ +++ + +AFWD + + ++ I+L E+R+ + + P + +I E
Sbjct: 99 LAGRVKHIVHQAFWDVLDSELNADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICEV 158
Query: 777 IDPEILSQVLSSGSLDIDYLGRILEFALTTLQKLSAPANDDD---MKANHQRLLKELAEI 833
+D +++ Q ++DI L + ++T+ KL AP D+D +KA +++ L +I
Sbjct: 159 LDTDLIRQQAEHSAVDIQGLAN---YVISTMGKLCAPVRDNDIRELKATG-NIVEVLRQI 214
Query: 834 CQIRDESNYSHVNAMIKGLR 853
+ D N I LR
Sbjct: 215 FHVLDLMQMDMANFTIMSLR 234
>sp|B1H2P5|CE120_XENTR Centrosomal protein of 120 kDa OS=Xenopus tropicalis GN=cep120 PE=2
SV=1
Length = 882
Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 110 QAAQQKRLSILAKAQKRLARLDELRQAAKTGVEMRFEKEREMLGSKVESRVQKAEANRML 169
Q+ Q++ S+ A+ + A L E R+ + + E +EM ++++K E M
Sbjct: 636 QSTGQEKGSLPAQTLQSTAPLPEPRETLEYKAALELEMWKEMQEDLFVNQLKKKELVHMQ 695
Query: 170 ILKAYSQRRDKLKERSSQSLLRRMTRE-SKYKERVRAAI-----HQKRLAAEKKRLGLLE 223
L +RRDK +E +L+++ E + +E+++ A+ +++LA ++ L L+
Sbjct: 696 ALAEEWKRRDKERE----ALVKKKVAEYTVLEEQLQKALADLEKRERQLANDEMELKKLK 751
Query: 224 AEKKKARARMLQ-----VRRVAKFVSHQREVERRKMREQLEDRL---QRAKRQRAEYLRQ 275
A+ + R +Q +RRV + HQ E+ER K ++ ED+L Q+ + +R
Sbjct: 752 AQMQLDCERSIQERQDSIRRVREDCMHQIELERSKAKQLEEDKLRLQQQVELERKLESTT 811
Query: 276 RARLHTVRINWNRMDKQ 292
+++LH + W R K+
Sbjct: 812 KSKLH-YKQQWGRALKE 827
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 337,902,034
Number of Sequences: 539616
Number of extensions: 13441365
Number of successful extensions: 65443
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 1455
Number of HSP's that attempted gapping in prelim test: 59131
Number of HSP's gapped (non-prelim): 4877
length of query: 1038
length of database: 191,569,459
effective HSP length: 128
effective length of query: 910
effective length of database: 122,498,611
effective search space: 111473736010
effective search space used: 111473736010
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)