Query 001646
Match_columns 1038
No_of_seqs 379 out of 1678
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 21:10:02 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/001646.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_40-44//hhsearch_pdb/001646hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 1.0 1 1 316.9 33.5 364 143-532 1-434 (439)
2 2r60_A Glycosyl transferase, g 1.0 1 1 311.3 34.3 371 144-534 7-465 (499)
3 3c48_A Predicted glycosyltrans 1.0 1 1 305.3 37.3 378 137-534 13-431 (438)
4 3okp_A GDP-mannose-dependent a 1.0 1 1 304.1 32.2 361 142-538 2-389 (394)
5 3s28_A Sucrose synthase 1; gly 1.0 1 1 302.0 30.9 367 143-529 277-770 (816)
6 2x6q_A Trehalose-synthase TRET 1.0 1 1 302.0 35.3 354 141-529 37-415 (416)
7 2jjm_A Glycosyl transferase, g 1.0 1 1 301.9 34.7 364 134-531 5-388 (394)
8 2qzs_A Glycogen synthase; glyc 1.0 1 1 299.0 30.3 360 145-531 1-479 (485)
9 1rzu_A Glycogen synthase 1; gl 1.0 1 1 298.4 28.6 363 145-534 1-481 (485)
10 2iw1_A Lipopolysaccharide core 1.0 1 1 290.5 24.3 351 145-530 1-373 (374)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=316.86 Aligned_cols=364 Identities=15% Similarity=0.161 Sum_probs=277.2
Q ss_pred CCCEEEEECCCC---CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH------------------HHCCCEEEEC
Q ss_conf 996499992899---9994999999999999983996999974898521224------------------4059108971
Q 001646 143 RKPQLALVFPDL---LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW------------------RNIGVPVAIL 201 (1038)
Q Consensus 143 RkprIalV~~~L---~iGGae~~i~~LAkaL~k~G~eV~Vit~~~g~~~~~~------------------e~~gI~v~~l 201 (1038)
|++||++|.+.. ..||.+.++..+++.|.+.||+|+|++.......... ...++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEE
T ss_conf 95289999502177666889999999999999779859998367788236552463014765310243125788408993
Q ss_pred CC----------------C-------HHHHHHHH-----HCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCHHH
Q ss_conf 55----------------2-------36898763-----21975999947751689999872789999799999090147
Q 001646 202 QT----------------G-------REKASFVN-----WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLA 253 (1038)
Q Consensus 202 ~~----------------~-------rkl~~lI~-----~~kpDIVhvhs~~~~~~ia~La~~~~~gIPvI~tiHg~~L~ 253 (1038)
+. . ......++ ..+||+||+|.+.. ..+..++. +..++|+|+++|+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~-~~~~~~~~-~~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT-VFAGALIK-KYFKIPAVFTIHRLNKS 158 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG-HHHHHHHH-HHHCCCEEEEESCCCCC
T ss_pred CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHH-HHHHHHHH-HCCCCCEEEEECCCCCC
T ss_conf 53220521246677630023257899999999999744479981999464034-34589886-52699789996534445
Q ss_pred ---HH-HHHHHHH--CHHHHHHHHHHHHHHCCEEECCCCCCCCC-CC--CCCCCCEEECCCCCCCCCCCCCCC-----CH
Q ss_conf ---76-9986410--30378878999987523576158861000-13--579998798099998865434356-----30
Q 001646 254 ---TR-ARNYASS--GQLELLNDWKKVFNRATVVVFPDYVLPMM-YS--AFDAGNYYVIPGSPAKAWEADTNM-----DL 319 (1038)
Q Consensus 254 ---~~-lek~~~~--~~d~iIs~~~~~~~~a~~vvfps~~l~vi-yn--~id~~ki~VIPgsgVD~~~f~~~~-----~~ 319 (1038)
.. ....... ............+..++.+++.+...... +. .....++.+||+ |+|...+.+.. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~n-gvd~~~~~~~~~~~~~~~ 237 (439)
T 3fro_A 159 KLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFN-GIDCSFWNESYLTGSRDE 237 (439)
T ss_dssp CEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCC-CCCTTTSCGGGSCSCHHH
T ss_pred CCCHHHHCCCCCCCCCCCCEEEHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCEEECCC-CCCCHHCCCCCCCCHHHH
T ss_conf 6856774745510035666320766655434588726898999986056504773453478-888043084322110456
Q ss_pred HHHHHHHHHCCCCCCEEEEEEECCCC-CCCCCCCHHHHHHHHHHCHHHC--CCCCCCCCCEEEEEEE-CCCCCCHHHHHH
Q ss_conf 14799886099999979999940134-2234344999999999733301--5577899997999991-899983299999
Q 001646 320 YNDTVRVKMGFKPDDLVIAIVGTQFM-YRGLWLEHALILRALLPLFSEV--SVENESNSPIKVMILS-GDSTSNYSVVIE 395 (1038)
Q Consensus 320 ~k~~lReklgi~~d~~vIL~VGsrl~-~~KGiKgldlLLeAl~~L~~k~--p~~~~~~~~vkLVIVG-G~~~e~Y~~~Lk 395 (1038)
.+..++++++++++ ++++++| ++. +. ||++.+++|+..+.++. ++ ++|+|+| |+. .|.+.++
T Consensus 238 ~~~~~~~~~~~~~~-~~i~~~G-~~~~~~---Kg~~~li~a~~~l~~~~~~~~-------~~l~i~G~g~~--~~~~~l~ 303 (439)
T 3fro_A 238 RKKSLLSKFGMDEG-VTFMFIG-RFDRGQ---KGVDVLLKAIEILSSKKEFQE-------MRFIIIGKGDP--ELEGWAR 303 (439)
T ss_dssp HHHHHHHHHTCCSC-EEEEEEC-CSSCTT---BCHHHHHHHHHHHHTSGGGGG-------EEEEEECCCCH--HHHHHHH
T ss_pred HHHHHHHHCCCCCC-CEEEEEC-CCCCCC---CCHHHHHHHHHHHHHCCCCCC-------EEEEEECCCCH--HHHHHHH
T ss_conf 69999997399998-4799973-335343---669999999999985466787-------18999807972--6778999
Q ss_pred HHHHHCCCCCCEEEECCCH--HHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEE
Q ss_conf 9999839999509993570--00999997647779825677588678999999909989974986521122348518999
Q 001646 396 AIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLF 473 (1038)
Q Consensus 396 eLa~qLgL~d~~V~flG~~--eeV~~lLaaADIfVlPS~~EeqGFPlvLLEAMA~GlPVIaTdvgGi~EiV~dG~nGlLv 473 (1038)
+++++++ + .+.+.|+. +++..+|++||++|+||..| |||++++|||+||+|||+++.+|.+|++.++ +|+++
T Consensus 304 ~~~~~~~--~-~~~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~ 377 (439)
T 3fro_A 304 SLEEKHG--N-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV 377 (439)
T ss_dssp HHHHHCT--T-EEEECSCCCHHHHHHHHTTCSEEEECBSCC--SSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE
T ss_pred HHHHHCC--C-EEEECCCCCHHHHHHHHHHCCEEEECCCCC--CCCHHHHHHHHCCCCEEECCCCCCCEEEECC-CEEEE
T ss_conf 9875069--8-999728799889999999779999589878--8618999999779976973788743168758-44896
Q ss_pred CCCCHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
Q ss_conf 28999999999999998-399918999999999999984089999999999999963599
Q 001646 474 PKENIKALTHIILQVIT-NGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLP 532 (1038)
Q Consensus 474 ~~~DveaLAeAI~~LLs-Dg~l~elr~~lg~~are~ak~Fs~e~ia~~Y~~Lle~iLk~P 532 (1038)
+++|+++++++|.++++ + ++.+.+|++++++.+++|+|+.++++|.++|+++++..
T Consensus 378 ~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 378 KAGDPGELANAILKALELS---RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp CTTCHHHHHHHHHHHHHHT---TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCCB
T ss_pred CCCCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8899899999999998319---99999999999998764729999999999999999754
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=311.33 Aligned_cols=371 Identities=14% Similarity=0.120 Sum_probs=278.0
Q ss_pred CCEEEEECCCC-------------CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH-HH----HH----HCCCEEEEC
Q ss_conf 96499992899-------------9994999999999999983996999974898521-22----44----059108971
Q 001646 144 KPQLALVFPDL-------------LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAH-EV----WR----NIGVPVAIL 201 (1038)
Q Consensus 144 kprIalV~~~L-------------~iGGae~~i~~LAkaL~k~G~eV~Vit~~~g~~~-~~----~e----~~gI~v~~l 201 (1038)
++||++|.+.. ..||++.++..+++.|.+.||+|+|++....... .. .+ ..++++..+
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEE
T ss_conf 52499996577744344234788887994334999999998559848999578872336511356775067898179982
Q ss_pred CCC------------------HHHHHHHHH--CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHH--
Q ss_conf 552------------------368987632--1975999947751689999872789999799999090147769986--
Q 001646 202 QTG------------------REKASFVNW--LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNY-- 259 (1038)
Q Consensus 202 ~~~------------------rkl~~lI~~--~kpDIVhvhs~~~~~~ia~La~~~~~gIPvI~tiHg~~L~~~lek~-- 259 (1038)
+.. ..+...++. .+||+||+|.... ..++.++.+ ..++|+|+++|+...... ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~-~~~~~~~~~-~~~~p~v~~~H~~~~~~~-~~~~~ 163 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDG-GLAGVLLKN-IKGLPFTFTGHSLGAQKM-EKLNV 163 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHH-HHCCCEEEECSSCHHHHH-HTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC-HHHHHHHHH-HCCCCEEEECCCCCCCCC-HHHCC
T ss_conf 577767768899999899999999999985389988899757862-079999887-359968998068400111-34414
Q ss_pred -------HHHCHH--HHHHHHHHHHHHCCEEECCCCCCCC-CCC----C-C----CCCCEEECCCCCCCCCCCCCCCCHH
Q ss_conf -------410303--7887899998752357615886100-013----5-7----9998798099998865434356301
Q 001646 260 -------ASSGQL--ELLNDWKKVFNRATVVVFPDYVLPM-MYS----A-F----DAGNYYVIPGSPAKAWEADTNMDLY 320 (1038)
Q Consensus 260 -------~~~~~d--~iIs~~~~~~~~a~~vvfps~~l~v-iyn----~-i----d~~ki~VIPgsgVD~~~f~~~~~~~ 320 (1038)
...... .........+..++.+++.+..... +.. + + +..++.+||+ |+|...+.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~n-gvd~~~~~~~~~~~ 242 (499)
T 2r60_A 164 NTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPP-GVNTRVFDGEYGDK 242 (499)
T ss_dssp CSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCC-CBCTTTSSSCCCHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEECC-CCCHHHCCCCCHHH
T ss_conf 78776124556788899999999984689999888899999986412464223467887699879-95866568641035
Q ss_pred -HHHHHHHHC-----CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCEEEEEEECC-CC------
Q ss_conf -479988609-----99999799999401342234344999999999733301557789999799999189-99------
Q 001646 321 -NDTVRVKMG-----FKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSGD-ST------ 387 (1038)
Q Consensus 321 -k~~lReklg-----i~~d~~vIL~VGsrl~~~KGiKgldlLLeAl~~L~~k~p~~~~~~~~vkLVIVGG~-~~------ 387 (1038)
+..+|++++ ++++.++|+++| ++.+. ||++.+++|+..+.++.++ .++|+|+|+. ..
T Consensus 243 ~~~~~r~~~~~~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~~l~~~~~~------~~~l~i~G~~~~~~~~y~~ 312 (499)
T 2r60_A 243 IKAKITKYLERDLGSERMELPAIIASS-RLDQK---KNHYGLVEAYVQNKELQDK------ANLVLTLRGIENPFEDYSR 312 (499)
T ss_dssp HHHHHHHHHHHHSCGGGTTSCEEEECS-CCCGG---GCHHHHHHHHHTCHHHHHH------CEEEEEESSCSBTTTBCTT
T ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEEE-CCCCC---CCHHHHHHHHHHHHHHCCC------CEEEEEECCCCCCCCCCCC
T ss_conf 678999883643345688876899960-68501---5889999999999873888------6599998788875322111
Q ss_pred -----CCHHHHHHHHHHHCCCCCCEEEECCCH--HHHHHHHHHC----CEEEECCCCCCCCCCHHHHHHHHCCCCEEECC
Q ss_conf -----832999999999839999509993570--0099999764----77798256775886789999999099899749
Q 001646 388 -----SNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTA----DVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (1038)
Q Consensus 388 -----e~Y~~~LkeLa~qLgL~d~~V~flG~~--eeV~~lLaaA----DIfVlPS~~EeqGFPlvLLEAMA~GlPVIaTd 456 (1038)
..|.+.++++++++++.+ +|.|+|++ +++..+|+.| |++|+||..| |||++++|||+||+|||+++
T Consensus 313 l~~~~~~y~~~l~~~~~~~~l~~-~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~E--g~~~~~lEAma~G~PvI~s~ 389 (499)
T 2r60_A 313 AGQEEKEILGKIIELIDNNDCRG-KVSMFPLNSQQELAGCYAYLASKGSVFALTSFYE--PFGLAPVEAMASGLPAVVTR 389 (499)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCBT-TEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCB--CCCSHHHHHHHTTCCEEEES
T ss_pred CCCCCHHHHHHHHHHHHHCCCCC-EEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCC--CCCCHHHHHHHCCCCEEEEC
T ss_conf 13201479999999998649986-0998788998999999995576798899786458--97968999997699889816
Q ss_pred CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 8652112234851899928999999999999998399918999999999999984-08999999999999996359987
Q 001646 457 LSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKN-LMALETIEGYAMLLENVLKLPSE 534 (1038)
Q Consensus 457 vgGi~EiV~dG~nGlLv~~~DveaLAeAI~~LLsDg~l~elr~~lg~~are~ak~-Fs~e~ia~~Y~~Lle~iLk~P~~ 534 (1038)
.+|++|++.++.+|+++++.|+++++++|.++++| ++.+.+|+.++++.+++ |+|+.++++|.++|++++.....
T Consensus 390 ~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~ 465 (499)
T 2r60_A 390 NGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFES---EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDE 465 (499)
T ss_dssp SBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSC---HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC---
T ss_pred CCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88778873478607995899999999999999869---99999999999999987579999999999999998732133
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=305.31 Aligned_cols=378 Identities=15% Similarity=0.150 Sum_probs=279.8
Q ss_pred CCCCCCCCCEEEEECCCCC---------CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH--HHHCCCEEEECCCC-
Q ss_conf 4567999964999928999---------99499999999999998399699997489852122--44059108971552-
Q 001646 137 LHRFGYRKPQLALVFPDLL---------IDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV--WRNIGVPVAILQTG- 204 (1038)
Q Consensus 137 ~~r~~~RkprIalV~~~L~---------iGGae~~i~~LAkaL~k~G~eV~Vit~~~g~~~~~--~e~~gI~v~~l~~~- 204 (1038)
-...+.+++||++|..... .||.+.++..+++.|.+.||+|+|++......... ....++.+..++..
T Consensus 13 ~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~ 92 (438)
T 3c48_A 13 GLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGP 92 (438)
T ss_dssp ------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSC
T ss_pred CCCCCCCHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 76657002033457753256346787887879999999999999669979999547887775400256874899924787
Q ss_pred ----------HH-------HHHH-HHHC-CCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHH--HHHHHHHC
Q ss_conf ----------36-------8987-6321-97599994775168999987278999979999909014776--99864103
Q 001646 205 ----------RE-------KASF-VNWL-NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATR--ARNYASSG 263 (1038)
Q Consensus 205 ----------rk-------l~~l-I~~~-kpDIVhvhs~~~~~~ia~La~~~~~gIPvI~tiHg~~L~~~--lek~~~~~ 263 (1038)
.. +... ++.. +||+||+|.... ..+..++.+ ..++|+|++.|+...... ........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~-~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~ 170 (438)
T 3c48_A 93 YEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLS-GQVGWLLRD-LWRIPLIHTAHTLAAVKNSYRDDSDTPE 170 (438)
T ss_dssp SSSCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHH-HHTCCEEEECSSCHHHHSCC----CCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCH-HHHHHHHHH-HCCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 54323667789999999999999984168999899477557-899999999-7499989994277401111100267731
Q ss_pred HHHHHHHHHHHHHHCCEEECCCCCCC-CC--CCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 03788789999875235761588610-00--1357999879809999886543435630147998860999999799999
Q 001646 264 QLELLNDWKKVFNRATVVVFPDYVLP-MM--YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIV 340 (1038)
Q Consensus 264 ~d~iIs~~~~~~~~a~~vvfps~~l~-vi--yn~id~~ki~VIPgsgVD~~~f~~~~~~~k~~lReklgi~~d~~vIL~V 340 (1038)
...........+..++.+++.+.... .+ ..+++..++.+||+ |+|...+.......+...+.+++++++.++++++
T Consensus 171 ~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~n-gvd~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 249 (438)
T 3c48_A 171 SEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSP-GADVELYSPGNDRATERSRRELGIPLHTKVVAFV 249 (438)
T ss_dssp HHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCC-CCCTTTSCCC----CHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCHHHEEEECC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEE
T ss_conf 578999999998408999984799999999985898202688269-7661104786620245668860899898489997
Q ss_pred ECCCCCCCCCCCHHHHHHHHHHCHHHCC--CCCCCCCCEEEEEEECCC-CCCHHHHHHHHHHHCCCCCCEEEECCCH--H
Q ss_conf 4013422343449999999997333015--577899997999991899-9832999999999839999509993570--0
Q 001646 341 GTQFMYRGLWLEHALILRALLPLFSEVS--VENESNSPIKVMILSGDS-TSNYSVVIEAIAHNLHYPLGVVKHMAAE--G 415 (1038)
Q Consensus 341 Gsrl~~~KGiKgldlLLeAl~~L~~k~p--~~~~~~~~vkLVIVGG~~-~e~Y~~~LkeLa~qLgL~d~~V~flG~~--e 415 (1038)
| ++.+. ||++.+++|+..+.++.| + ++|+|+|+.. ...+.+.++++++++++.+ +|.|+|++ +
T Consensus 250 G-~~~~~---Kg~~~li~a~~~l~~~~p~~~-------~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~-~v~~~g~~~~~ 317 (438)
T 3c48_A 250 G-RLQPF---KGPQVLIKAVAALFDRDPDRN-------LRVIICGGPSGPNATPDTYRHMAEELGVEK-RIRFLDPRPPS 317 (438)
T ss_dssp S-CBSGG---GCHHHHHHHHHHHHHHCTTCS-------EEEEEECCBC------CHHHHHHHHTTCTT-TEEEECCCCHH
T ss_pred E-EECCC---CCHHHHHHHHHHHHHHCCCCC-------EEEEEEECCCCCCCHHHHHHHHHHHCCCCC-CEEECCCCCHH
T ss_conf 4-31566---798999999999996397766-------699998188877727899999999719878-68985889858
Q ss_pred HHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 09999976477798256775886789999999099899749865211223485189992899999999999999839991
Q 001646 416 DVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKIS 495 (1038)
Q Consensus 416 eV~~lLaaADIfVlPS~~EeqGFPlvLLEAMA~GlPVIaTdvgGi~EiV~dG~nGlLv~~~DveaLAeAI~~LLsDg~l~ 495 (1038)
++..+|+.||++|+||..| |||++++|||+||+|||+++.++.+|++.++.+|+++++.|+++++++|.++++| +
T Consensus 318 ~~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~---~ 392 (438)
T 3c48_A 318 ELVAVYRAADIVAVPSFNE--SFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD---D 392 (438)
T ss_dssp HHHHHHHHCSEEEECCSCC--SSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC---H
T ss_pred HHHHHHHHCCEEEECCCCC--CCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCC---H
T ss_conf 8999998589999874026--8755999998769988962798725775079727987999999999999999759---8
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 899999999999998408999999999999996359987
Q 001646 496 PFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSE 534 (1038)
Q Consensus 496 elr~~lg~~are~ak~Fs~e~ia~~Y~~Lle~iLk~P~~ 534 (1038)
+.+.+|++++++.+++|+|+.++++|.++|+++++.+..
T Consensus 393 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 393 ETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999988579999999999999998631366
No 4
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=1.00 E-value=1 Score=304.05 Aligned_cols=361 Identities=13% Similarity=0.123 Sum_probs=281.4
Q ss_pred CCCCEEEEECCCCC--CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC--HHHHHHCCCEEEECCCC---------HHHH
Q ss_conf 99964999928999--99499999999999998399699997489852--12244059108971552---------3689
Q 001646 142 YRKPQLALVFPDLL--IDPQQLQMVTIAIALREIGYAIQVYSLEDGRA--HEVWRNIGVPVAILQTG---------REKA 208 (1038)
Q Consensus 142 ~RkprIalV~~~L~--iGGae~~i~~LAkaL~k~G~eV~Vit~~~g~~--~~~~e~~gI~v~~l~~~---------rkl~ 208 (1038)
.+++||++|.+.+. .||.+.++..+++.| .||+|+|++...... .......++++..++.. ..+.
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMA 79 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--CCCEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
T ss_conf 9886699992766886551999999999985--69768999778886424443345662899845654555514699999
Q ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCC-EEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEECCCCC
Q ss_conf 8763219759999477516899998727899997-999990901477699864103037887899998752357615886
Q 001646 209 SFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLP-LVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYV 287 (1038)
Q Consensus 209 ~lI~~~kpDIVhvhs~~~~~~ia~La~~~~~gIP-vI~tiHg~~L~~~lek~~~~~~d~iIs~~~~~~~~a~~vvfps~~ 287 (1038)
+.++..+||+||+|.......+..++. ..++| +|++.|+...... . ........+..+..++.+++.+..
T Consensus 80 ~~~~~~~~Dvv~~~~~~~~~~~~~~~~--~~~~~~~i~~~h~~~~~~~-----~--~~~~~~~~~~~~~~~d~ii~~s~~ 150 (394)
T 3okp_A 80 EIIREREIDNVWFGAAAPLALMAGTAK--QAGASKVIASTHGHEVGWS-----M--LPGSRQSLRKIGTEVDVLTYISQY 150 (394)
T ss_dssp HHHHHTTCSEEEESSCTTGGGGHHHHH--HTTCSEEEEECCSTHHHHT-----T--SHHHHHHHHHHHHHCSEEEESCHH
T ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHH--HCCCCCEEEEECCCHHHHH-----H--CCHHHHHHHHHHHHCCEEEECCHH
T ss_conf 998763898899888544889999997--5189819999346423332-----1--220348999999867979976889
Q ss_pred CC-CCCC-CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCHH
Q ss_conf 10-0013-579998798099998865434356301479988609999997999994013422343449999999997333
Q 001646 288 LP-MMYS-AFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFS 365 (1038)
Q Consensus 288 l~-viyn-~id~~ki~VIPgsgVD~~~f~~~~~~~k~~lReklgi~~d~~vIL~VGsrl~~~KGiKgldlLLeAl~~L~~ 365 (1038)
.. .+.. .....++.+||+ |++...+.+..+..+..++++++++++.++++++| ++.+. ||++.+++|+..+.+
T Consensus 151 ~~~~~~~~~~~~~~~~vi~n-gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---Kg~~~li~a~~~l~~ 225 (394)
T 3okp_A 151 TLRRFKSAFGSHPTFEHLPS-GVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNS-RLVPR---KGQDSLIKAMPQVIA 225 (394)
T ss_dssp HHHHHHHHHCSSSEEEECCC-CBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEES-CSCGG---GCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCEEEECC-CCCHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEE-CCCCC---CCHHHHHHHHHHHHH
T ss_conf 99999984189998588369-85888758877214689998649985766999976-44134---588799999999886
Q ss_pred HCCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCEEEECCCH--HHHHHHHHHCCEEEECCCC-------CC
Q ss_conf 015577899997999991-8999832999999999839999509993570--0099999764777982567-------75
Q 001646 366 EVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL-------EE 435 (1038)
Q Consensus 366 k~p~~~~~~~~vkLVIVG-G~~~e~Y~~~LkeLa~qLgL~d~~V~flG~~--eeV~~lLaaADIfVlPS~~-------Ee 435 (1038)
+.++ ++|+|+| |+.. +.+++++ .++.+ +|.|+|++ +++..+|+.||++|+||.. |
T Consensus 226 ~~~~-------~~l~i~G~g~~~----~~l~~~~--~~~~~-~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e- 290 (394)
T 3okp_A 226 ARPD-------AQLLIVGSGRYE----STLRRLA--TDVSQ-NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE- 290 (394)
T ss_dssp HSTT-------CEEEEECCCTTH----HHHHHHT--GGGGG-GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCC-
T ss_pred HCCC-------EEEEEECCCHHH----HHHHHHH--HCCCC-EEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCC-
T ss_conf 1898-------699998686479----9999987--55457-2999078997899999986899994575556665655-
Q ss_pred CCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHHCH
Q ss_conf 88678999999909989974986521122348518999289999999999999983999189999999999999-84089
Q 001646 436 QTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMA 514 (1038)
Q Consensus 436 qGFPlvLLEAMA~GlPVIaTdvgGi~EiV~dG~nGlLv~~~DveaLAeAI~~LLsDg~l~elr~~lg~~are~a-k~Fs~ 514 (1038)
|||++++|||++|+|||+++.++..|++.++ +|++++++|+++++++|.+++++ ++.++++++++++.+ ++|+|
T Consensus 291 -~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s~ 365 (394)
T 3okp_A 291 -GLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDD---PIRRAAMGAAGRAHVEAEWSW 365 (394)
T ss_dssp -SSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHTBH
T ss_pred -CCCCHHHHHHHCCCCEEEECCCCHHHHHHCC-CCEEECCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHCCH
T ss_conf -5673999999759979993899737787468-85672899999999999999819---999999999999999874799
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 999999999999963599877798
Q 001646 515 LETIEGYAMLLENVLKLPSEVAFP 538 (1038)
Q Consensus 515 e~ia~~Y~~Lle~iLk~P~~~~~p 538 (1038)
+.++++|.++|+++.........|
T Consensus 366 ~~~~~~~~~~~~~~~r~~~~~~~~ 389 (394)
T 3okp_A 366 EIMGERLTNILQSEPRKLAAALEH 389 (394)
T ss_dssp HHHHHHHHHHHHSCCC--------
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 999999999999720376134443
No 5
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=302.00 Aligned_cols=367 Identities=7% Similarity=-0.000 Sum_probs=260.2
Q ss_pred CCCEEEEECCCC-----------CCCHHHHHHHH--------HHHHHHHCCCEEE----EEECCCCCC-----HHHHH--
Q ss_conf 996499992899-----------99949999999--------9999998399699----997489852-----12244--
Q 001646 143 RKPQLALVFPDL-----------LIDPQQLQMVT--------IAIALREIGYAIQ----VYSLEDGRA-----HEVWR-- 192 (1038)
Q Consensus 143 RkprIalV~~~L-----------~iGGae~~i~~--------LAkaL~k~G~eV~----Vit~~~g~~-----~~~~e-- 192 (1038)
|..+|++|.++. ..||..+++.. +++.|.++||+|+ |+|...... ....+
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i 356 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERV 356 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEEC
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEE
T ss_conf 52489998477665754457888889836509989989999999999977996200168996898787777657751155
Q ss_pred --HCCCEEEECCCCHH----------------H--------HHHHHH--CCCCEEEECCCCHHHHHHHHHHCCCCCCCEE
Q ss_conf --05910897155236----------------8--------987632--1975999947751689999872789999799
Q 001646 193 --NIGVPVAILQTGRE----------------K--------ASFVNW--LNYDGILVNSLEAKVVISNIMQEPFKSLPLV 244 (1038)
Q Consensus 193 --~~gI~v~~l~~~rk----------------l--------~~lI~~--~kpDIVhvhs~~~~~~ia~La~~~~~gIPvI 244 (1038)
..++.+..+++... + ..++.. .+||+||+|.... +.++.++.+ ..++|+|
T Consensus 357 ~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~s-glva~llar-~~gvP~V 434 (816)
T 3s28_A 357 YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDG-NLVASLLAH-KLGVTQC 434 (816)
T ss_dssp TTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHH-HHHHHHHHH-HHTCCEE
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH-HHHHHHHHH-HCCCCEE
T ss_conf 48697599996687766543345657788999999999999999996589973999688538-999999999-7599889
Q ss_pred EEEECCHHHHH------HHHHHHHC-HHHHHHHHHHHHHHCCEEECCCCCCCC-------CCCC----------------
Q ss_conf 99909014776------99864103-037887899998752357615886100-------0135----------------
Q 001646 245 WTIHEGTLATR------ARNYASSG-QLELLNDWKKVFNRATVVVFPDYVLPM-------MYSA---------------- 294 (1038)
Q Consensus 245 ~tiHg~~L~~~------lek~~~~~-~d~iIs~~~~~~~~a~~vvfps~~l~v-------iyn~---------------- 294 (1038)
+|.|+...... ........ ...-+......+..++.++..+..... .|..
T Consensus 435 ~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI 514 (816)
T 3s28_A 435 TIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514 (816)
T ss_dssp EECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESC
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
T ss_conf 99816630012223301556778888988888999999849999988899999999888776442013541122101224
Q ss_pred -CCCCCEEECCCCCCCCCCCCCCCCHHH----------------HHHHHHHCC--CCCCEEEEEEECCCCCCCCCCCHHH
Q ss_conf -799987980999988654343563014----------------799886099--9999799999401342234344999
Q 001646 295 -FDAGNYYVIPGSPAKAWEADTNMDLYN----------------DTVRVKMGF--KPDDLVIAIVGTQFMYRGLWLEHAL 355 (1038)
Q Consensus 295 -id~~ki~VIPgsgVD~~~f~~~~~~~k----------------~~lReklgi--~~d~~vIL~VGsrl~~~KGiKgldl 355 (1038)
....++.+||+ |+|...|.+.....+ ...++.+++ ++++++|+++| ++.+. ||++.
T Consensus 515 ~~~~~ki~VIpn-GVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vG-Rl~~~---KGid~ 589 (816)
T 3s28_A 515 DVFDPKFNIVSP-GADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMA-RLDRV---KNLSG 589 (816)
T ss_dssp CTTCTTEEECCC-CCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEEC-CCCTT---TTHHH
T ss_pred CCCCCCEEEECC-CCCHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEC-CCCCC---CCHHH
T ss_conf 467788799889-74788728631035543200232000124605677774445789983999974-47221---79999
Q ss_pred HHHHHHHCHHHCCCCCCCCCCEEEEEEE-CCC-------CCCHHHHHHHHHHHCCCCCCEEEECCCH------HHHHHHH
Q ss_conf 9999997333015577899997999991-899-------9832999999999839999509993570------0099999
Q 001646 356 ILRALLPLFSEVSVENESNSPIKVMILS-GDS-------TSNYSVVIEAIAHNLHYPLGVVKHMAAE------GDVDSVL 421 (1038)
Q Consensus 356 LLeAl~~L~~k~p~~~~~~~~vkLVIVG-G~~-------~e~Y~~~LkeLa~qLgL~d~~V~flG~~------eeV~~lL 421 (1038)
+++|+..+.+..++ ++|+|+| |+. ...+.+.++++++++++.+ +|.|+|++ +++..+|
T Consensus 590 LIeA~~~L~~~~~~-------v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~-~V~flG~~~~~v~~~eL~~~~ 661 (816)
T 3s28_A 590 LVEWYGKNTRLREL-------ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNG-QFRWISSQMDRVRNGELYRYI 661 (816)
T ss_dssp HHHHHHHCHHHHHH-------CEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBB-BEEEECCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC-------EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-CEEECCCCCCCCCHHHHHHHH
T ss_conf 99999997855799-------6999996887533343356999999999999749987-289816755668999999999
Q ss_pred H-HCCEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH----HCCCCCH
Q ss_conf 7-6477798256775886789999999099899749865211223485189992899999999999999----8399918
Q 001646 422 N-TADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVI----TNGKISP 496 (1038)
Q Consensus 422 a-aADIfVlPS~~EeqGFPlvLLEAMA~GlPVIaTdvgGi~EiV~dG~nGlLv~~~DveaLAeAI~~LL----sDg~l~e 496 (1038)
+ ++|++|+||..| |||++++||||||+|||+|+.||++|+|.++.+|+++++.|+++++++|..++ .| ++
T Consensus 662 ~~aaDvfV~PS~~E--gfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d---~~ 736 (816)
T 3s28_A 662 CDTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED---PS 736 (816)
T ss_dssp HHTTCEEEECCSCB--SSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHC---TH
T ss_pred HHCCEEEEECCCCC--CCCHHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCC---HH
T ss_conf 95690999888755--76499999998099999968987699970698189968999999999999999875269---99
Q ss_pred HHHHHHHHHHHHH-HHHCHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999-84089999999999999963
Q 001646 497 FARNIASIGRRSV-KNLMALETIEGYAMLLENVL 529 (1038)
Q Consensus 497 lr~~lg~~are~a-k~Fs~e~ia~~Y~~Lle~iL 529 (1038)
.+.+|+.+|++.+ ++|+|+.++++|.++|+...
T Consensus 737 ~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 737 HWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 9999999999999986899999999999999976
No 6
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=1.00 E-value=1 Score=301.97 Aligned_cols=354 Identities=14% Similarity=0.213 Sum_probs=266.2
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHH-HHH-----HCCCEEEECCC---------CH
Q ss_conf 9999649999289999949999999999999839969999748985212-244-----05910897155---------23
Q 001646 141 GYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHE-VWR-----NIGVPVAILQT---------GR 205 (1038)
Q Consensus 141 ~~RkprIalV~~~L~iGGae~~i~~LAkaL~k~G~eV~Vit~~~g~~~~-~~e-----~~gI~v~~l~~---------~r 205 (1038)
.++++||+++.+....||++.++..+++.|.+.||+|.+++........ ... ..+.+...+.. ..
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNR 116 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHH
T ss_pred HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf 21260899991788888799999999999996797589997269853101314554453246554566888998999999
Q ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEECCC
Q ss_conf 68987632197599994775168999987278999979999909014776998641030378878999987523576158
Q 001646 206 EKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPD 285 (1038)
Q Consensus 206 kl~~lI~~~kpDIVhvhs~~~~~~ia~La~~~~~gIPvI~tiHg~~L~~~lek~~~~~~d~iIs~~~~~~~~a~~vvfps 285 (1038)
.+...++..+||+||+|+.... .+..++. ..+|+|++.|+...... ..........+..++.+++..
T Consensus 117 ~~~~~l~~~~~Dvv~~~~~~~~-~~~~~~~---~~~p~v~~~h~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~ 183 (416)
T 2x6q_A 117 ENSKFIDLSSFDYVLVHDPQPA-ALIEFYE---KKSPWLWRCHIDLSSPN---------REFWEFLRRFVEKYDRYIFHL 183 (416)
T ss_dssp HHHHSSCGGGSSEEEEESSTTG-GGGGGSC---CCSCEEEECCSCCSSCC---------HHHHHHHHHHHTTSSEEEESS
T ss_pred HHHHHHHHCCCCEEEEECCCHH-HHHHHHH---HCCCEEEEECCCCCCCC---------HHHHHHHHHHHHHCCEEEEEC
T ss_conf 9999876439988999255355-6999998---35989999826667842---------779999999998579799965
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 861000135799987980999988654343--563014799886099999979999940134223434499999999973
Q 001646 286 YVLPMMYSAFDAGNYYVIPGSPAKAWEADT--NMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPL 363 (1038)
Q Consensus 286 ~~l~viyn~id~~ki~VIPgsgVD~~~f~~--~~~~~k~~lReklgi~~d~~vIL~VGsrl~~~KGiKgldlLLeAl~~L 363 (1038)
+. .....+...++.+||+ |+|...+.. ..+..+..++.+++++++.++++++| ++.+. ||++.+++|+..+
T Consensus 184 s~--~~~~~~~~~~~~vi~n-gvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~~l 256 (416)
T 2x6q_A 184 PE--YVQPELDRNKAVIMPP-SIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVS-RFDPW---KGIFDVIEIYRKV 256 (416)
T ss_dssp GG--GSCTTSCTTTEEECCC-CBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEEC-CCCTT---SCHHHHHHHHHHH
T ss_pred HH--HHHHHCCCCCEEEECC-CCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE-CCCCC---CCHHHHHHHHHHH
T ss_conf 69--9972278465289479-9785664244467566899999838998984899996-24434---6979999999999
Q ss_pred HHHCCCCCCCCCCEEEEEEE-CCCC-CCHHHHHHHHHHHCCCCCCEEEECCCHH-----HHHHHHHHCCEEEECCCCCCC
Q ss_conf 33015577899997999991-8999-8329999999998399995099935700-----099999764777982567758
Q 001646 364 FSEVSVENESNSPIKVMILS-GDST-SNYSVVIEAIAHNLHYPLGVVKHMAAEG-----DVDSVLNTADVVIYGSFLEEQ 436 (1038)
Q Consensus 364 ~~k~p~~~~~~~~vkLVIVG-G~~~-e~Y~~~LkeLa~qLgL~d~~V~flG~~e-----eV~~lLaaADIfVlPS~~Eeq 436 (1038)
.++.|+ ++|+|+| |+.. ..+.+.++++++++++.+ +|.|+|+.. ++..+|+.||++|+||..|
T Consensus 257 ~~~~~~-------~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~-~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E-- 326 (416)
T 2x6q_A 257 KEKIPG-------VQLLLVGVMAHDDPEGWIYFEKTLRKIGEDY-DVKVLTNLIGVHAREVNAFQRASDVILQMSIRE-- 326 (416)
T ss_dssp HHHCTT-------CEEEEEECCCTTCHHHHHHHHHHHHHHTTCT-TEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSC--
T ss_pred HHHCCC-------EEEEEEECCCCCCHHHHHHHHHHHHHHCCCC-CEEEECCCCCCCHHHHHHHHHHCCEEEECCCCC--
T ss_conf 974888-------1899996676565567999999999808988-679944668887778999998689999877868--
Q ss_pred CCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHHCHH
Q ss_conf 8678999999909989974986521122348518999289999999999999983999189999999999999-840899
Q 001646 437 TFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMAL 515 (1038)
Q Consensus 437 GFPlvLLEAMA~GlPVIaTdvgGi~EiV~dG~nGlLv~~~DveaLAeAI~~LLsDg~l~elr~~lg~~are~a-k~Fs~e 515 (1038)
|||++++|||+||+|||+++.+|++|++.++.+|++++ |+++++++|..+++| ++.+++|++++++.+ ++|+|+
T Consensus 327 ~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~~fs~~ 401 (416)
T 2x6q_A 327 GFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH---PEVSKEMGAKAKERVRKNFIIT 401 (416)
T ss_dssp SSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHTBHH
T ss_pred CCCCHHHHHHHCCCCEEECCCCCCHHHEECCCCEEEEC--CHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHCCHH
T ss_conf 87608999998499899725998751201288869979--999999999999859---9999999999999998872899
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999963
Q 001646 516 ETIEGYAMLLENVL 529 (1038)
Q Consensus 516 ~ia~~Y~~Lle~iL 529 (1038)
.++++|.++|++++
T Consensus 402 ~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 402 KHMERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999960
No 7
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=1.00 E-value=1 Score=301.93 Aligned_cols=364 Identities=15% Similarity=0.155 Sum_probs=274.7
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCEEEECC-----------
Q ss_conf 554456799996499992899999499999999999998399699997489852122440591089715-----------
Q 001646 134 HRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQ----------- 202 (1038)
Q Consensus 134 ~~~~~r~~~RkprIalV~~~L~iGGae~~i~~LAkaL~k~G~eV~Vit~~~g~~~~~~e~~gI~v~~l~----------- 202 (1038)
|++.+.+--++|++...... ..||.+.++..+++.|.+.||+|++++........ ....++.+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~p-~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 82 (394)
T 2jjm_A 5 GSSHHHHHHMKLKIGITCYP-SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-KVYPNIYFHEVTVNQYSVFQYPP 82 (394)
T ss_dssp ----------CCEEEEECCC---CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----CCCTTEEEECCCCC----CCSCC
T ss_pred CCCCCCHHHHEEEEEHHCCC-CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC-CCCCCEEEEECCCCCCCCCCCCC
T ss_conf 56642000001455510078-98987899999999999689879999688877620-03786289852566654001565
Q ss_pred ----CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCC-CCCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf ----523689876321975999947751689999872789-999799999090147769986410303788789999875
Q 001646 203 ----TGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPF-KSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNR 277 (1038)
Q Consensus 203 ----~~rkl~~lI~~~kpDIVhvhs~~~~~~ia~La~~~~-~gIPvI~tiHg~~L~~~lek~~~~~~d~iIs~~~~~~~~ 277 (1038)
....+.+.++..+||+||+|+.........++.... .++|+|+++|+.... .... ........+..+..
T Consensus 83 ~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-----~~~~-~~~~~~~~~~~~~~ 156 (394)
T 2jjm_A 83 YDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT-----VLGS-DPSLNNLIRFGIEQ 156 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----TTTT-CTTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-----CCCC-CHHHHHHHHHHHHH
T ss_conf 20799999999997769999997243377788999888626787779997157521-----2588-87788999999861
Q ss_pred CCEEECCCCCCC-CCCCCC-CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHH
Q ss_conf 235761588610-001357-999879809999886543435630147998860999999799999401342234344999
Q 001646 278 ATVVVFPDYVLP-MMYSAF-DAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHAL 355 (1038)
Q Consensus 278 a~~vvfps~~l~-viyn~i-d~~ki~VIPgsgVD~~~f~~~~~~~k~~lReklgi~~d~~vIL~VGsrl~~~KGiKgldl 355 (1038)
++.+++.+.... .+.... ...++.++|+ |++...+. +..+...+.+++++++.++++++| ++.+. ||++.
T Consensus 157 ad~ii~~s~~~~~~~~~~~~~~~~~~vi~n-gv~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---Kg~~~ 228 (394)
T 2jjm_A 157 SDVVTAVSHSLINETHELVKPNKDIQTVYN-FIDERVYF---KRDMTQLKKEYGISESEKILIHIS-NFRKV---KRVQD 228 (394)
T ss_dssp SSEEEESCHHHHHHHHHHTCCSSCEEECCC-CCCTTTCC---CCCCHHHHHHTTCC---CEEEEEC-CCCGG---GTHHH
T ss_pred CCEEEECCHHHHHHHHHHHCCCCCEEEECC-CCCHHHCC---CCCHHHHHHHCCCCCCCEEEEEEE-CCCCC---CCHHH
T ss_conf 998999799999999985287656799558-75687608---863488998719998880899950-46653---58899
Q ss_pred HHHHHHHCHHHCCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCEEEECCCCC
Q ss_conf 9999997333015577899997999991-899983299999999983999950999357000999997647779825677
Q 001646 356 ILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLE 434 (1038)
Q Consensus 356 LLeAl~~L~~k~p~~~~~~~~vkLVIVG-G~~~e~Y~~~LkeLa~qLgL~d~~V~flG~~eeV~~lLaaADIfVlPS~~E 434 (1038)
+++|+..+.++ ++ ++|+|+| |+.. +.++++++++++.+ +|.|+|+.+++..+|+.||++|+||..|
T Consensus 229 li~a~~~l~~~-~~-------~~l~i~G~g~~~----~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~~adv~v~ps~~e 295 (394)
T 2jjm_A 229 VVQAFAKIVTE-VD-------AKLLLVGDGPEF----CTILQLVKNLHIED-RVLFLGKQDNVAELLAMSDLMLLLSEKE 295 (394)
T ss_dssp HHHHHHHHHHS-SC-------CEEEEECCCTTH----HHHHHHHHTTTCGG-GBCCCBSCSCTHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHH-CC-------CEEEEECCCHHH----HHHHHHHHHCCCCC-EEEEECCHHHHHHHHHHCCEEEECCCCC
T ss_conf 99999999853-79-------789998896579----99999999739987-5999276665999998678999656667
Q ss_pred CCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHHC
Q ss_conf 588678999999909989974986521122348518999289999999999999983999189999999999999-8408
Q 001646 435 EQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLM 513 (1038)
Q Consensus 435 eqGFPlvLLEAMA~GlPVIaTdvgGi~EiV~dG~nGlLv~~~DveaLAeAI~~LLsDg~l~elr~~lg~~are~a-k~Fs 513 (1038)
|||++++|||+||+|||+++.+|++|++.++.+|++++++|+++++++|..+++| ++.+.+|++++++.+ ++|+
T Consensus 296 --~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s 370 (394)
T 2jjm_A 296 --SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD---EELHRNMGERARESVYEQFR 370 (394)
T ss_dssp --SCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHSC
T ss_pred --CCCHHHHHHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHCC
T ss_conf --8726899999649988981589807776348853996899999999999999749---79999999999999987379
Q ss_pred HHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999996359
Q 001646 514 ALETIEGYAMLLENVLKL 531 (1038)
Q Consensus 514 ~e~ia~~Y~~Lle~iLk~ 531 (1038)
|+.++++|.++|++++..
T Consensus 371 ~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 371 SEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp HHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999966
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=299.04 Aligned_cols=360 Identities=14% Similarity=0.085 Sum_probs=260.9
Q ss_pred CEEEEECCCC----CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH---------------------HHCCCEEE
Q ss_conf 6499992899----9994999999999999983996999974898521224---------------------40591089
Q 001646 145 PQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW---------------------RNIGVPVA 199 (1038)
Q Consensus 145 prIalV~~~L----~iGGae~~i~~LAkaL~k~G~eV~Vit~~~g~~~~~~---------------------e~~gI~v~ 199 (1038)
+||++|.+.+ ..||++.++..+++.|.+.||+|+|++.........+ ...++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCEEE
T ss_conf 96999964104665677399999999999997498789994476434543456405787415687179999987894799
Q ss_pred ECCCC-----------------------------HHHHHHHHH----CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 71552-----------------------------368987632----197599994775168999987278999979999
Q 001646 200 ILQTG-----------------------------REKASFVNW----LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWT 246 (1038)
Q Consensus 200 ~l~~~-----------------------------rkl~~lI~~----~kpDIVhvhs~~~~~~ia~La~~~~~gIPvI~t 246 (1038)
.++.. ..+..+++. .+||+||+|.+.. ..++.++..+..++|+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~-~~~~~~~~~~~~~~p~v~t 159 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHA-GLAPAYLAARGRPAKSVFT 159 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGG-TTHHHHHHHTTCSSEEEEE
T ss_pred EEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCH-HHHHHHHHHCCCCCCEEEE
T ss_conf 970826506898766775457787358999999999999999845678997899606213-3789997543689978999
Q ss_pred EECCHHHHH-----HHHH--HHH-C------HHHHHHHHHHHHHHCCEEECCCCCCCC-CCC---CC--------CC--C
Q ss_conf 909014776-----9986--410-3------037887899998752357615886100-013---57--------99--9
Q 001646 247 IHEGTLATR-----ARNY--ASS-G------QLELLNDWKKVFNRATVVVFPDYVLPM-MYS---AF--------DA--G 298 (1038)
Q Consensus 247 iHg~~L~~~-----lek~--~~~-~------~d~iIs~~~~~~~~a~~vvfps~~l~v-iyn---~i--------d~--~ 298 (1038)
+|+...... +... ... . ........+..+..++.+++.+..... +.. ++ .. .
T Consensus 160 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (485)
T 2qzs_A 160 VHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREG 239 (485)
T ss_dssp ESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTT
T ss_pred ECCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCC
T ss_conf 46841357889888876499913213111232465469999987538688568899999854014724689998506678
Q ss_pred CEEECCCCCCCCCCCCCCCCH----------------HHHHHHHHHCCCC--CCEEEEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf 879809999886543435630----------------1479988609999--9979999940134223434499999999
Q 001646 299 NYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFKP--DDLVIAIVGTQFMYRGLWLEHALILRAL 360 (1038)
Q Consensus 299 ki~VIPgsgVD~~~f~~~~~~----------------~k~~lReklgi~~--d~~vIL~VGsrl~~~KGiKgldlLLeAl 360 (1038)
++.+||+ |+|...+.+.... .+..+++++++++ +.++++++| ++.+. ||++.+++|+
T Consensus 240 ~~~vi~n-gvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~ 314 (485)
T 2qzs_A 240 RLSGVLN-GVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVS-RLTSQ---KGLDLVLEAL 314 (485)
T ss_dssp CEEECCC-CCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEE-EESGG---GCHHHHHHHH
T ss_pred CEEEEEC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC-CCCCC---CCHHHHHHHH
T ss_conf 6699746-98766458644422212366300657788499999871988899973999966-67543---5879999999
Q ss_pred HHCHHHCCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCEEE-ECCCHH-HHHHHHHHCCEEEECCCCCCCC
Q ss_conf 97333015577899997999991-89998329999999998399995099-935700-0999997647779825677588
Q 001646 361 LPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVK-HMAAEG-DVDSVLNTADVVIYGSFLEEQT 437 (1038)
Q Consensus 361 ~~L~~k~p~~~~~~~~vkLVIVG-G~~~e~Y~~~LkeLa~qLgL~d~~V~-flG~~e-eV~~lLaaADIfVlPS~~EeqG 437 (1038)
..+.+. + ++|+|+| |+. .+.+.+++++.+++ + +|. +.|+.. ++..+|+.||++|+||.+| |
T Consensus 315 ~~l~~~--~-------~~l~ivG~g~~--~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~pS~~E--~ 378 (485)
T 2qzs_A 315 PGLLEQ--G-------GQLALLGAGDP--VLQEGFLAAAAEYP--G-QVGVQIGYHEAFSHRIMGGADVILVPSRFE--P 378 (485)
T ss_dssp HHHHHT--T-------CEEEEEEEECH--HHHHHHHHHHHHST--T-TEEEEESCCHHHHHHHHHHCSEEEECCSCC--S
T ss_pred HHHHHC--C-------CEEEEEECCCH--HHHHHHHHHHHHCC--C-CEEEECCCCHHHHHHHHHHCCEEEECCCCC--C
T ss_conf 998627--9-------48999928956--78999999997579--9-389947899799999997588999788567--8
Q ss_pred CCHHHHHHHHCCCCEEECCCCCCCCCCCCC---------CCEEEECCCCHHHHHHHHHHHH---HCCCCCHHHHHHHHHH
Q ss_conf 678999999909989974986521122348---------5189992899999999999999---8399918999999999
Q 001646 438 FPEILVKALCFRKPIIAPDLSNIRKYVDDR---------VNGYLFPKENIKALTHIILQVI---TNGKISPFARNIASIG 505 (1038)
Q Consensus 438 FPlvLLEAMA~GlPVIaTdvgGi~EiV~dG---------~nGlLv~~~DveaLAeAI~~LL---sDg~l~elr~~lg~~a 505 (1038)
||++++|||+||+|||+++.+|++|++.++ .+|++++++|+++|+++|.+++ +| ++.+.+|+.++
T Consensus 379 ~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~---~~~~~~~~~~~ 455 (485)
T 2qzs_A 379 CGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSR---PSLWRFVQRQA 455 (485)
T ss_dssp SCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTS---HHHHHHHHHHH
T ss_pred CCHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHH
T ss_conf 767999999779977987899832552157644344466645997789999999999999987089---99999999998
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHCC
Q ss_conf 99998408999999999999996359
Q 001646 506 RRSVKNLMALETIEGYAMLLENVLKL 531 (1038)
Q Consensus 506 re~ak~Fs~e~ia~~Y~~Lle~iLk~ 531 (1038)
++ ++|+|+.++++|.++|++++.-
T Consensus 456 ~~--~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 456 MA--MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp HH--CCCCHHHHHHHHHHHHHHHC--
T ss_pred HH--HCCCHHHHHHHHHHHHHHHHHH
T ss_conf 76--3289899999999999986542
No 9
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=298.43 Aligned_cols=363 Identities=14% Similarity=0.092 Sum_probs=263.2
Q ss_pred CEEEEECCCC----CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH----------------------HHCCCEE
Q ss_conf 6499992899----9994999999999999983996999974898521224----------------------4059108
Q 001646 145 PQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW----------------------RNIGVPV 198 (1038)
Q Consensus 145 prIalV~~~L----~iGGae~~i~~LAkaL~k~G~eV~Vit~~~g~~~~~~----------------------e~~gI~v 198 (1038)
+||++|.+.+ ..||++.++..+++.|.+.||+|+|++.........+ ...++++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCEE
T ss_conf 96999944651565665499999999999997698699991564433444356513689998308747899999669569
Q ss_pred EECCCC-----------------------------HHHHHHH----HHCCCCEEEECCCCHHHHHHHHHHC-CCCCCCEE
Q ss_conf 971552-----------------------------3689876----3219759999477516899998727-89999799
Q 001646 199 AILQTG-----------------------------REKASFV----NWLNYDGILVNSLEAKVVISNIMQE-PFKSLPLV 244 (1038)
Q Consensus 199 ~~l~~~-----------------------------rkl~~lI----~~~kpDIVhvhs~~~~~~ia~La~~-~~~gIPvI 244 (1038)
..++.. ..+..++ +..+||+||+|.+.. ..++.++.. ...++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~-~~~~~~~~~~~~~~~p~v 159 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQA-AMTPVYMRYAETPEIPSL 159 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHH-TTHHHHHHHSSSCCCCEE
T ss_pred EEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCH-HHHHHHHHHCCCCCCCEE
T ss_conf 9984867727776655886566653067999999999999999861579998899646305-578999731035899789
Q ss_pred EEEECCHHHHH-----HHHH--HHH-C------HHHHHHHHHHHHHHCCEEECCCCCCC-CCCC---C--------CCCC
Q ss_conf 99909014776-----9986--410-3------03788789999875235761588610-0013---5--------7999
Q 001646 245 WTIHEGTLATR-----ARNY--ASS-G------QLELLNDWKKVFNRATVVVFPDYVLP-MMYS---A--------FDAG 298 (1038)
Q Consensus 245 ~tiHg~~L~~~-----lek~--~~~-~------~d~iIs~~~~~~~~a~~vvfps~~l~-viyn---~--------id~~ 298 (1038)
+++|+...... +... ... . ........+..+..++.+++.+.... .+.. + +...
T Consensus 160 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (485)
T 1rzu_A 160 LTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAH 239 (485)
T ss_dssp EEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGG
T ss_pred EEECCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCC
T ss_conf 99667544687887787343998032020001325623599988864677996087589998354357665899986068
Q ss_pred CEEECCCCCCCCCCCCCCCCH----------------HHHHHHHHHCCCCC-CEEEEEEECCCCCCCCCCCHHHHHHHHH
Q ss_conf 879809999886543435630----------------14799886099999-9799999401342234344999999999
Q 001646 299 NYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFKPD-DLVIAIVGTQFMYRGLWLEHALILRALL 361 (1038)
Q Consensus 299 ki~VIPgsgVD~~~f~~~~~~----------------~k~~lReklgi~~d-~~vIL~VGsrl~~~KGiKgldlLLeAl~ 361 (1038)
++.+||+ |+|...+.+.... .+..++++++++++ +++++++| ++.+. ||++.+++|+.
T Consensus 240 ~~~vi~n-gvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~ 314 (485)
T 1rzu_A 240 VLHGIVN-GIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVIS-RLTWQ---KGIDLMAEAVD 314 (485)
T ss_dssp GEEECCC-CBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEES-CBSTT---TTHHHHHTTHH
T ss_pred CCEEECC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC-CCCCC---CCHHHHHHHHH
T ss_conf 8169708-9860205886651100012432445678869999996298889983999972-57531---28799999999
Q ss_pred HCHHHCCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCEEE-ECCCHHH-HHHHHHHCCEEEECCCCCCCCC
Q ss_conf 7333015577899997999991-89998329999999998399995099-9357000-9999976477798256775886
Q 001646 362 PLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVK-HMAAEGD-VDSVLNTADVVIYGSFLEEQTF 438 (1038)
Q Consensus 362 ~L~~k~p~~~~~~~~vkLVIVG-G~~~e~Y~~~LkeLa~qLgL~d~~V~-flG~~ee-V~~lLaaADIfVlPS~~EeqGF 438 (1038)
.+.+. + ++|+|+| |+. .+.+.+++++.+++ + +|. +.|+..+ +..+|++||++|+||.+| ||
T Consensus 315 ~l~~~--~-------~~l~ivG~g~~--~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~pS~~E--~~ 378 (485)
T 1rzu_A 315 EIVSL--G-------GRLVVLGAGDV--ALEGALLAAASRHH--G-RVGVAIGYNEPLSHLMQAGCDAIIIPSRFE--PC 378 (485)
T ss_dssp HHHHT--T-------CEEEEEECBCH--HHHHHHHHHHHHTT--T-TEEEEESCCHHHHHHHHHHCSEEEECCSCC--SS
T ss_pred HHHHC--C-------CEEEEEECCCH--HHHHHHHHHHHHCC--C-CEEEECCCCHHHHHHHHHCCCEEEECCCCC--CC
T ss_conf 98726--9-------56999968946--89999999998678--8-689943899799999985299999784468--87
Q ss_pred CHHHHHHHHCCCCEEECCCCCCCCCCCCC---------CCEEEECCCCHHHHHHHHHHHH---HCCCCCHHHHHHHHHHH
Q ss_conf 78999999909989974986521122348---------5189992899999999999999---83999189999999999
Q 001646 439 PEILVKALCFRKPIIAPDLSNIRKYVDDR---------VNGYLFPKENIKALTHIILQVI---TNGKISPFARNIASIGR 506 (1038)
Q Consensus 439 PlvLLEAMA~GlPVIaTdvgGi~EiV~dG---------~nGlLv~~~DveaLAeAI~~LL---sDg~l~elr~~lg~~ar 506 (1038)
|++++|||+||+|||+++.+|++|++.++ .+|+++++.|+++|+++|.+++ +| ++.+.+|+.+++
T Consensus 379 ~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~---~~~~~~~~~~~~ 455 (485)
T 1rzu_A 379 GLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD---PKLWTQMQKLGM 455 (485)
T ss_dssp CSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC---HHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCEEEECCCCHHHEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHH
T ss_conf 77999999779977980899831132156533234567763486789999999999999987279---999999999999
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9998408999999999999996359987
Q 001646 507 RSVKNLMALETIEGYAMLLENVLKLPSE 534 (1038)
Q Consensus 507 e~ak~Fs~e~ia~~Y~~Lle~iLk~P~~ 534 (1038)
+ ++|+|+.++++|.++|++++..+..
T Consensus 456 ~--~~fs~~~~~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 456 K--SDVSWEKSAGLYAALYSQLISKGHH 481 (485)
T ss_dssp T--CCCBHHHHHHHHHHHHHHHTC----
T ss_pred H--HHCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 8--8689699999999999986379988
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=1.00 E-value=1 Score=290.52 Aligned_cols=351 Identities=14% Similarity=0.093 Sum_probs=261.0
Q ss_pred CEEEEECCC-CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCEEEECCCC------------HHHHHHH
Q ss_conf 649999289-999949999999999999839969999748985212244059108971552------------3689876
Q 001646 145 PQLALVFPD-LLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG------------REKASFV 211 (1038)
Q Consensus 145 prIalV~~~-L~iGGae~~i~~LAkaL~k~G~eV~Vit~~~g~~~~~~e~~gI~v~~l~~~------------rkl~~lI 211 (1038)
+||+++.+. ...||.+.++..+++.|.+.||+|+|++....... ..++++..++.. ..+...+
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~i 76 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC----PKAFELIQVPVKSHTNHGRNAEYYAWVQNHL 76 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC----CTTCEEEECCCCCSSHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 969999721588761635999999999967984899964898878----8774799971686443016778999999998
Q ss_pred HHCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHH--HCCEEECCCCCCC
Q ss_conf 32197599994775168999987278999979999909014776998641030378878999987--5235761588610
Q 001646 212 NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFN--RATVVVFPDYVLP 289 (1038)
Q Consensus 212 ~~~kpDIVhvhs~~~~~~ia~La~~~~~gIPvI~tiHg~~L~~~lek~~~~~~d~iIs~~~~~~~--~a~~vvfps~~l~ 289 (1038)
+..+||+||+|..... ....+. .....++.+++.|+.. ...... ...........+. .++.+++.+....
T Consensus 77 ~~~~~Dvv~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 148 (374)
T 2iw1_A 77 KEHPADRVVGFNKMPG-LDVYFA-ADVCYAEKVAQEKGFL-----YRLTSR-YRHYAAFERATFEQGKSTKLMMLTDKQI 148 (374)
T ss_dssp HHSCCSEEEESSCCTT-CSEEEC-CSCCHHHHHHHHCCHH-----HHTSHH-HHHHHHHHHHHHSTTCCCEEEESCHHHH
T ss_pred HCCCCCEEEEECCCCC-CEEEEC-CCCCCCEEEEECCCCH-----HHHCHH-HHHHHHHHHHHHHCCCCCEEEECCHHHH
T ss_conf 5069988999667788-521300-1565421333035621-----210477-8999999999864267757998698999
Q ss_pred -CC--CCCCCCCCEEECCCCCCCCCCCCCCCCHH-HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCHH
Q ss_conf -00--13579998798099998865434356301-479988609999997999994013422343449999999997333
Q 001646 290 -MM--YSAFDAGNYYVIPGSPAKAWEADTNMDLY-NDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFS 365 (1038)
Q Consensus 290 -vi--yn~id~~ki~VIPgsgVD~~~f~~~~~~~-k~~lReklgi~~d~~vIL~VGsrl~~~KGiKgldlLLeAl~~L~~ 365 (1038)
.+ .-+++..++.++|+ |+|...+....... +..++++++++++.++++++| ++.+. ||++.+++|+..+.+
T Consensus 149 ~~~~~~~~~~~~~~~vi~n-gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---K~~~~li~a~~~l~~ 223 (374)
T 2iw1_A 149 ADFQKHYQTEPERFQILPP-GIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVG-SDFGR---KGVDRSIEALASLPE 223 (374)
T ss_dssp HHHHHHHCCCGGGEEECCC-CCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEEC-SCTTT---TTHHHHHHHHHTSCH
T ss_pred HHHHHHHCCCHHHEEEECC-CCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEC-CCHHH---CCHHHHHHHHHHHHH
T ss_conf 9999971897110688569-858776176442357999999728997872999964-64101---388999999998676
Q ss_pred H-CCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHH
Q ss_conf 0-15577899997999991-899983299999999983999950999357000999997647779825677588678999
Q 001646 366 E-VSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILV 443 (1038)
Q Consensus 366 k-~p~~~~~~~~vkLVIVG-G~~~e~Y~~~LkeLa~qLgL~d~~V~flG~~eeV~~lLaaADIfVlPS~~EeqGFPlvLL 443 (1038)
+ .++ ++|+|+| |+ . +.++++++++++.+ +|.|+|+.+++..+|+.||++|+||..| |||++++
T Consensus 224 ~~~~~-------~~l~i~G~g~-~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~ps~~e--~~~~~~~ 288 (374)
T 2iw1_A 224 SLRHN-------TLLFVVGQDK-P----RKFEALAEKLGVRS-NVHFFSGRNDVSELMAAADLLLHPAYQE--AAGIVLL 288 (374)
T ss_dssp HHHHT-------EEEEEESSSC-C----HHHHHHHHHHTCGG-GEEEESCCSCHHHHHHHCSEEEECCSCC--SSCHHHH
T ss_pred CCCCC-------EEEEEECCCC-H----HHHHHHHHHCCCCC-CEEECCCCCCHHHHHHHCCEEEECCCCC--CCCCHHH
T ss_conf 04886-------6999970898-7----99999999739877-3797788403899998468898354247--7556999
Q ss_pred HHHHCCCCEEECCCCCCCCCCCCCCCEEEEC-CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 9999099899749865211223485189992-899999999999999839991899999999999998408999999999
Q 001646 444 KALCFRKPIIAPDLSNIRKYVDDRVNGYLFP-KENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYA 522 (1038)
Q Consensus 444 EAMA~GlPVIaTdvgGi~EiV~dG~nGlLv~-~~DveaLAeAI~~LLsDg~l~elr~~lg~~are~ak~Fs~e~ia~~Y~ 522 (1038)
|||+||+|||+++.+|..|++.++.+|++++ +.|+++++++|.++++| ++.++++++++++.+++++|...++.+.
T Consensus 289 Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T 2iw1_A 289 EAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ---SPLRMAWAENARHYADTQDLYSLPEKAA 365 (374)
T ss_dssp HHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHSCCSCHHHHHH
T ss_pred HHHHCCCCEEEECCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9997799889826998044430698319967999989999999999719---4999999999999998753899999999
Q ss_pred HHHHHHHC
Q ss_conf 99999635
Q 001646 523 MLLENVLK 530 (1038)
Q Consensus 523 ~Lle~iLk 530 (1038)
++++..+.
T Consensus 366 ~~l~~~l~ 373 (374)
T 2iw1_A 366 DIITGGLD 373 (374)
T ss_dssp HHHHCC--
T ss_pred HHHHHHHC
T ss_conf 99998636
Done!