Your job contains 1 sequence.
>001648
MEEKRREAGAQPAATSSAAAGAESAASEPASSRRRAGAHKRKASALSATNASSTPSKRMT
REKNLVAHTPIYNHNGPLTRARQGPTTLAAAAAFGGAPGSAGGKLEAARDDSTFEAIEEL
NKASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQ
DRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPF
PHVESSVANSDGDRMTDADSDAAAKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGL
FPESAIAEELAKLEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSS
SDFILMVPGEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQM
PIEDMFLDCDDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSK
PEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVG
YVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCF
ILEDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKK
IEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIV
EESNDLPSKVLQSSQKESGEGSSGEPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVA
EPSPPSKLTNDVDMVSDPQPLENNEPEKQITSSTEKPSESTEAPKDVEMVSTSLPSEINE
PQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQYIDKLKHAAVTALSAAAVKAKLLA
CQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQERALIIQA
RLGPSRVMQPSVPANRNPMTFANSVARPPMSMTSPRPPISRPMVPQSSTPSNPFGSTTTA
GSSIRPSSQDNLSSVGMK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001648
(1038 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036942 - symbol:SWI3C "SWITCH/sucrose nonferm... 433 2.3e-47 2
UNIPROTKB|G3N0H4 - symbol:SMARCC1 "Uncharacterized protei... 185 9.4e-35 4
POMBASE|SPAC23H3.10 - symbol:ssr2 "SWI/SNF and RSC comple... 362 1.3e-34 2
ZFIN|ZDB-GENE-080514-3 - symbol:smarcc1a "SWI/SNF related... 200 1.3e-33 3
ASPGD|ASPL0000005061 - symbol:AN6705 species:162425 "Emer... 210 2.0e-33 3
RGD|1597704 - symbol:Smarcc2 "SWI/SNF related, matrix ass... 191 1.4e-32 4
TAIR|locus:2051028 - symbol:SWI3B "switch subunit 3" spec... 198 3.2e-32 4
UNIPROTKB|F1PVA9 - symbol:SMARCC2 "Uncharacterized protei... 185 8.3e-32 4
UNIPROTKB|Q92922 - symbol:SMARCC1 "SWI/SNF complex subuni... 189 9.7e-31 3
ZFIN|ZDB-GENE-060503-273 - symbol:smarcc1b "SWI/SNF relat... 189 1.8e-30 4
RGD|1304850 - symbol:Smarcc1 "SWI/SNF related, matrix ass... 192 2.3e-30 3
UNIPROTKB|G4MV88 - symbol:MGG_01720 "Transcription regula... 178 4.0e-30 4
MGI|MGI:1203524 - symbol:Smarcc1 "SWI/SNF related, matrix... 187 4.1e-30 3
TAIR|locus:2043263 - symbol:SWI3A "SWITCH/sucrose nonferm... 292 9.1e-30 2
UNIPROTKB|F1MYU1 - symbol:SMARCC1 "Uncharacterized protei... 185 9.9e-30 3
UNIPROTKB|F1P1A8 - symbol:F1P1A8 "Uncharacterized protein... 186 1.4e-29 3
UNIPROTKB|E2REF0 - symbol:SMARCC1 "Uncharacterized protei... 185 1.4e-29 3
DICTYBASE|DDB_G0277033 - symbol:swi3 "SWIRM domain-contai... 187 3.2e-29 4
SGD|S000001933 - symbol:RSC8 "Component of the RSC chroma... 342 5.2e-28 1
FB|FBgn0002783 - symbol:mor "moira" species:7227 "Drosoph... 186 1.7e-27 4
UNIPROTKB|G5EF87 - symbol:swsn-1 "SWI3-like protein" spec... 193 4.1e-27 3
WB|WBGene00004203 - symbol:swsn-1 species:6239 "Caenorhab... 193 4.2e-27 3
UNIPROTKB|Q8TAQ2 - symbol:SMARCC2 "SWI/SNF complex subuni... 185 4.8e-27 3
UNIPROTKB|F8VXC8 - symbol:SMARCC2 "SWI/SNF complex subuni... 185 5.2e-27 3
MGI|MGI:1915344 - symbol:Smarcc2 "SWI/SNF related, matrix... 185 6.0e-27 3
UNIPROTKB|F1N4N6 - symbol:SMARCC2 "Uncharacterized protei... 186 6.5e-27 3
UNIPROTKB|F1SM00 - symbol:LOC100621845 "Uncharacterized p... 185 6.2e-26 4
UNIPROTKB|I3LRY4 - symbol:I3LRY4 "Uncharacterized protein... 185 7.5e-26 4
POMBASE|SPAC17G6.10 - symbol:ssr1 "SWI/SNF and RSC comple... 288 1.9e-23 2
CGD|CAL0002007 - symbol:orf19.4488 species:5476 "Candida ... 219 2.1e-17 3
SGD|S000003712 - symbol:SWI3 "Subunit of the SWI/SNF chro... 168 2.4e-17 4
CGD|CAL0003837 - symbol:orf19.7234 species:5476 "Candida ... 159 9.3e-17 3
DICTYBASE|DDB_G0288285 - symbol:mybX "myb domain-containi... 169 1.3e-14 3
UNIPROTKB|I3LNI6 - symbol:LOC100737447 "Uncharacterized p... 130 3.7e-11 2
UNIPROTKB|I3LJ29 - symbol:SMARCC1 "Uncharacterized protei... 186 7.8e-11 1
UNIPROTKB|F1SLI6 - symbol:LOC100626030 "Uncharacterized p... 186 3.1e-10 3
FB|FBgn0037836 - symbol:CG14692 species:7227 "Drosophila ... 164 1.6e-07 1
TAIR|locus:2137544 - symbol:AT4G37820 "AT4G37820" species... 143 3.7e-06 1
SGD|S000002856 - symbol:ADA2 "Transcription coactivator" ... 137 1.2e-05 1
FB|FBgn0039257 - symbol:tnc "tenectin" species:7227 "Dros... 146 1.4e-05 1
TAIR|locus:2130609 - symbol:ADA2B "homolog of yeast ADA2 ... 137 1.4e-05 1
DICTYBASE|DDB_G0295719 - symbol:DDB_G0295719 "unknown" sp... 138 1.6e-05 1
POMBASE|SPCC24B10.08c - symbol:ada2 "SAGA complex subunit... 135 2.0e-05 1
ZFIN|ZDB-GENE-090313-297 - symbol:si:dkey-27m7.4 "si:dkey... 136 5.8e-05 1
UNIPROTKB|E9PTW3 - symbol:Dspp "Dentin sialophosphoprotei... 133 9.9e-05 1
ZFIN|ZDB-GENE-031112-4 - symbol:stm "starmaker" species:7... 105 0.00015 2
ZFIN|ZDB-GENE-050522-205 - symbol:nefma "neurofilament, m... 129 0.00023 1
DICTYBASE|DDB_G0293562 - symbol:DDB_G0293562 species:4468... 124 0.00023 2
FB|FBgn0037555 - symbol:Ada2b "transcriptional Adaptor 2b... 126 0.00028 1
ZFIN|ZDB-GENE-050522-557 - symbol:tada2b "transcriptional... 124 0.00037 1
TAIR|locus:504955937 - symbol:AT2G22795 "AT2G22795" speci... 125 0.00052 1
UNIPROTKB|F1NQ15 - symbol:HAUS6 "Uncharacterized protein"... 126 0.00054 1
UNIPROTKB|Q86TJ2 - symbol:TADA2B "Transcriptional adapter... 121 0.00062 1
RGD|1561605 - symbol:Tada2b "transcriptional adaptor 2B" ... 121 0.00062 1
CGD|CAL0005156 - symbol:SRP40 species:5476 "Candida albic... 91 0.00070 2
UNIPROTKB|Q5A1Y5 - symbol:SRP40 "Putative uncharacterized... 91 0.00070 2
RGD|1565734 - symbol:Ercc6l "excision repair cross-comple... 126 0.00076 1
FB|FBgn0001253 - symbol:ImpE1 "Ecdysone-inducible gene E1... 127 0.00081 1
UNIPROTKB|Q9NZW4 - symbol:DSPP "Dentin sialophosphoprotei... 126 0.00081 1
CGD|CAL0000716 - symbol:ADA2 species:5476 "Candida albica... 124 0.00082 2
UNIPROTKB|Q59WH0 - symbol:ADA2 "Putative uncharacterized ... 124 0.00082 2
DICTYBASE|DDB_G0283391 - symbol:kinX "protein kinase, TKL... 125 0.00085 1
MGI|MGI:109172 - symbol:Dspp "dentin sialophosphoprotein"... 124 0.00090 1
>TAIR|locus:2036942 [details] [associations]
symbol:SWI3C "SWITCH/sucrose nonfermenting 3C"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA]
[GO:0045132 "meiotic chromosome segregation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
HSSP:P32591 eggNOG:COG5259 EMBL:AC007727 KO:K11649 EMBL:AY091026
EMBL:AY117245 IPI:IPI00532467 PIR:D86350 RefSeq:NP_173589.1
UniGene:At.41645 ProteinModelPortal:Q9XI07 SMR:Q9XI07 IntAct:Q9XI07
STRING:Q9XI07 PaxDb:Q9XI07 PRIDE:Q9XI07 EnsemblPlants:AT1G21700.1
GeneID:838774 KEGG:ath:AT1G21700 TAIR:At1g21700
HOGENOM:HOG000243996 InParanoid:Q9XI07 OMA:VAASCAH PhylomeDB:Q9XI07
ProtClustDB:CLSN2679743 Genevestigator:Q9XI07 Uniprot:Q9XI07
Length = 807
Score = 433 (157.5 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 109/321 (33%), Positives = 157/321 (48%)
Query: 137 DFEAIRSRDSN-VHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIM 195
D E + R + VHV+P H WF+ + LE Q +P FF+GKS + TP+ YME RN I+
Sbjct: 163 DGEGVVKRFGDLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIV 222
Query: 196 KKFHSNPITQIELKDLSELEVG-SLDARQEVMEFLDYWGLINF------HPFPHVESSVA 248
K+ NP + + D L G ++ V FLD+WG+IN+ HP P + S
Sbjct: 223 SKYVENPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDV 282
Query: 249 NSDGDRMTXXXXXXXXKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGLFPESAIAE 308
D + SL++ K G + +PS+ G P+ I
Sbjct: 283 REDTNGEVNVPSAALTSIDSLIKFDKPNCRHKGGEVYSSLPSL------DGDSPDLDI-- 334
Query: 309 ELAKLEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVP 368
++ + HCN CS + QK+ D LC DCF++G+F S DF+ + P
Sbjct: 335 ---RIREHLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDP 391
Query: 369 GEAAG-VSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFL 427
+ G G WTDQ Y ENW +IA+HV +K+KAQCILHF+++P+ED L
Sbjct: 392 MKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLL 451
Query: 428 DCDDDVDGNLKETTDDAPTNG 448
D + +V G T + PTNG
Sbjct: 452 D-NVEVSG---VTNTENPTNG 468
Score = 142 (55.0 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 38/144 (26%), Positives = 72/144 (50%)
Query: 831 STSLPSEINEPQQTDSITGTETARV--EDQNRDG--QDEKHDSKETKNDQYIDKXXXXXX 886
S S+ SE ++ +++ + G E + + E+Q +DG + + E + DK
Sbjct: 526 SLSVLSE-DDRMKSEGMQGKEASLLDGENQQQDGAHKTSSQNGAEAQTPLPQDKVMAAFR 584
Query: 887 XXXXXXXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERS 946
EE +I++L+ +++ QL+++E KL F E++ + M+ EQ+E++
Sbjct: 585 AGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKT 644
Query: 947 RQRLYQERALIIQARLGPSRVMQP 970
RQR ERA ++ AR G + P
Sbjct: 645 RQRFSAERARMLSARFGSPGGISP 668
Score = 76 (31.8 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 551 FAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGN----SPAMQLAAKHCFILEDPP 606
F + NPVMAL AFL GP + + A SL +S + S MQ K +L D
Sbjct: 496 FVKSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDDRMKSEGMQ--GKEASLL-DGE 552
Query: 607 GDKKEVAHSESIV--AEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIE 662
+++ AH S AE A + +D+ + +A+ + L DH +++I+
Sbjct: 553 NQQQDGAHKTSSQNGAE-AQTPLPQDKVMAAFRAGLSAAAT---KAKLFADHEEREIQ 606
Score = 45 (20.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 710 KSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVE 753
KSP S +E N + SK +++ +K VD+E
Sbjct: 205 KSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIE 248
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 689 PANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESND 725
PA++D K + LS + PK + + EE +
Sbjct: 2 PASEDRRGKWKRKKRGGLSAARKPKQEEEDMEEEDEE 38
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 580 SSLKSISGNSPAMQL 594
SSL S+ G+SP + +
Sbjct: 320 SSLPSLDGDSPDLDI 334
>UNIPROTKB|G3N0H4 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:DAAA02054442 Ensembl:ENSBTAT00000065210 Uniprot:G3N0H4
Length = 925
Score = 185 (70.2 bits), Expect = 9.4e-35, Sum P(4) = 9.4e-35
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 143 SRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNP 202
+ +N ++P++ WF + IH +E +ALP FFNGK++ +TP+IY+ RN+++ + NP
Sbjct: 379 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNP 438
Query: 203 ITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFP 241
+ G + A V FL+ WGL+N+ P
Sbjct: 439 QEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDP 477
Score = 154 (59.3 bits), Expect = 9.4e-35, Sum P(4) = 9.4e-35
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 370 EAAGVSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLD 428
++ G S G+ WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+
Sbjct: 550 KSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE 609
Query: 429 CDD 431
D
Sbjct: 610 NSD 612
Score = 121 (47.7 bits), Expect = 9.4e-35, Sum P(4) = 9.4e-35
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 836 SEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQYIDKXXXXXXXXXXXXXXX 895
SE++E +++ E + D ++ + + K+ +++
Sbjct: 778 SEVSEDTKSEEKEAEENKELTDSCKERESDV-GKKKVEHEISEGNVATAAAAALASAATK 836
Query: 896 XXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
EE +I+ L L+E Q++KLE KL F E++ + R +E LE+ RQ+L ER
Sbjct: 837 AKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTER 895
Score = 104 (41.7 bits), Expect = 9.4e-35, Sum P(4) = 9.4e-35
Identities = 53/199 (26%), Positives = 85/199 (42%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFIL 602
P P F++ GNPVM+ AFL + P + +A+A+++L+ S +
Sbjct: 617 PLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSR-------------VR 663
Query: 603 EDPPGDKKEVAHSESIVAEMADRDIQKDET--LEDINVKEC--NSASVLDERDLSNDHGD 658
E+ P + E AH + V E A + D T LE + + LD+ HG+
Sbjct: 664 EEVPLELVE-AHVKK-VQEAARASGKVDPTYGLESSCIAGTGPDEPEKLDDVGTKRSHGE 721
Query: 659 KKIEDSVPEEKRH-AASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQP 717
++ D P+ KR AAS +L A +T E D+ D E N K+ + Q
Sbjct: 722 GEVTDDTPDCKRSLAASKGGLMHIQLK-AENKGENETDEGDKAQD-GE--NEKNSEKEQD 777
Query: 718 SIVEESNDLPSKVLQSSQK 736
S V E K + +++
Sbjct: 778 SEVSEDTKSEEKEAEENKE 796
Score = 69 (29.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 34/142 (23%), Positives = 60/142 (42%)
Query: 602 LEDPP-GDKKEVAHSESIVAE------MADRDIQKDETLEDINVKECNSASVLDERDLSN 654
+EDPP +K H++ I+ M + D + DE + ++ ++ S +E S
Sbjct: 189 IEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKN-EEPVRSP 247
Query: 655 DHGDKKIEDSVPEEKRHAASLNEKPSE--KLNGATGPAN-----QDTPEKDEPGDLNELS 707
+ D+K + + K + P+E K +G G A+ + E+DE DL +
Sbjct: 248 ERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDM 307
Query: 708 NPKSPKDNQPSIVEESNDLPSK 729
+P N +V N P K
Sbjct: 308 EDPTPVPNIEEVVLPKNVNPKK 329
Score = 59 (25.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 37/160 (23%), Positives = 66/160 (41%)
Query: 653 SNDHGDKKIEDS-VPEE--KRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNP 709
SND D +IED +PE+ K HA + + ++ N + + E +P +
Sbjct: 182 SNDV-DAEIEDPPIPEKPWKVHAKWILD--TDVFNEWMNEEDYEVDENRKPVSFRQRI-- 236
Query: 710 KSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSL----PS 765
S K+ +P E D K +++K P P +K SL S
Sbjct: 237 -STKNEEPVRSPERRD--RKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRS 293
Query: 766 GKNEPDQRVLSNSVAEPSPPSKLTNDVDMVSDPQPLENNE 805
K E +Q L+ + +P+P + +V + + P +++E
Sbjct: 294 QKEEDEQEDLTKDMEDPTPVPNI-EEVVLPKNVNPKKDSE 332
Score = 53 (23.7 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 436 NLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTS 494
N K+ +++ P G T A D + TG E + + S+ D E + E T+
Sbjct: 326 NPKKDSENTPVKGGTVADLDEQDEETVTTGGKEDE-DPGKGDQSRSVDPGEDNVTEQTN 383
Score = 48 (22.0 bits), Expect = 4.2e-21, Sum P(3) = 4.2e-21
Identities = 35/133 (26%), Positives = 52/133 (39%)
Query: 439 ETTDDAPT---NGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPE-DASELKICEDTS 494
E DD T +G+ + D + S + G +K E + E +D
Sbjct: 708 EKLDDVGTKRSHGEGEVTDDTPDCKRSLAASKGGLMHIQLKAENKGENETDEGDKAQDGE 767
Query: 495 KPKDESDVKVDEQMLKSEDT-SEGKVGQETGENIALKALREAFEAVGYVPT-HETPQSFA 552
K+ S+ + D ++ SEDT SE K +E E + +E VG HE +
Sbjct: 768 NEKN-SEKEQDSEV--SEDTKSEEKEAEENKE--LTDSCKERESDVGKKKVEHEISE--- 819
Query: 553 EVGNPVMALAAFL 565
GN A AA L
Sbjct: 820 --GNVATAAAAAL 830
Score = 43 (20.2 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 857 DQNRDGQDEKHDSKETKND 875
D+ +DG++EK+ KE ++
Sbjct: 761 DKAQDGENEKNSEKEQDSE 779
Score = 38 (18.4 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 20/105 (19%), Positives = 43/105 (40%)
Query: 601 ILEDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKK 660
+ +D P K+ +A S+ + + + K E D E + A +D N+ +K
Sbjct: 724 VTDDTPDCKRSLAASKGGLMHIQLKAENKGENETD----EGDKA-----QDGENEKNSEK 774
Query: 661 IEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNE 705
+DS E + + +++L + D +K +++E
Sbjct: 775 EQDSEVSEDTKSEEKEAEENKELTDSCKERESDVGKKKVEHEISE 819
Score = 37 (18.1 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 427 LDCDDDVDGNLKETTDDAPTNGDTSASKDVAE 458
LD D+ D+ P GD S S D E
Sbjct: 344 LDEQDEETVTTGGKEDEDPGKGDQSRSVDPGE 375
>POMBASE|SPAC23H3.10 [details] [associations]
symbol:ssr2 "SWI/SNF and RSC complex subunit Ssr2"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IC] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0016586 "RSC complex" evidence=IDA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS01357 PROSITE:PS50135
PROSITE:PS50934 SMART:SM00291 SMART:SM00717 PomBase:SPAC23H3.10
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000790 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016586 eggNOG:COG5259
OrthoDB:EOG4PZNGG KO:K11649 EMBL:D89227 PIR:T38303 PIR:T43061
RefSeq:NP_593800.1 ProteinModelPortal:O14470 SMR:O14470
DIP:DIP-48383N STRING:O14470 EnsemblFungi:SPAC23H3.10.1
GeneID:2541851 KEGG:spo:SPAC23H3.10 OMA:TEYLTIT NextBio:20802939
Uniprot:O14470
Length = 503
Score = 362 (132.5 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 88/292 (30%), Positives = 142/292 (48%)
Query: 150 VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELK 209
+VP++ GWF +KIH +E ++ P FFNGKS +TP IY + R++++ + P + +
Sbjct: 19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVT 78
Query: 210 DLSELEVGSLDARQEVMEFLDYWGLINFHPFP-------------HVESSVANSD--GDR 254
VG + A V FL+ WGLIN+ P HV++ ++N+
Sbjct: 79 ACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISGHVQA-ISNTPIVTQE 137
Query: 255 MTXXXXXXXXKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGLFPESAIAEELAKLE 314
M GS ++ + EE P + M T P E+ K+
Sbjct: 138 MLAQHPPPSTVGGSSSQEFVKLEEKHYSPSLNAMEQ-TSPKEED---------EKSDKV- 186
Query: 315 GPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGV 374
P V+ C +C +CS+ YH K +D+C +C+ G+F S +SSDF+ M +
Sbjct: 187 -PRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFNHD 245
Query: 375 SGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMF 426
W++Q Y ++WN+IA HV ++TK QC++HF+Q+PIED +
Sbjct: 246 EEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPY 297
Score = 70 (29.7 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 25/123 (20%), Positives = 47/123 (38%)
Query: 834 LPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETK--NDQYIDKXXXXXXXXXXX 891
LP + NE ++T + + Q+E ET N ++ +
Sbjct: 313 LPFDENENPVLSTLTYLASIVQQGMKERKQNESVKQGETSFGNSEFKNPLERVAYYALKS 372
Query: 892 XXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLY 951
E Q+R+L SLI+ QL+KL+ K+ +++ + +L+ + L
Sbjct: 373 AAQKAKLIAAFENRQLRRLVFSLIQAQLEKLQLKMKVLEQLEKMCSLELSELDLRGKNLL 432
Query: 952 QER 954
R
Sbjct: 433 LSR 435
>ZFIN|ZDB-GENE-080514-3 [details] [associations]
symbol:smarcc1a "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily c, member 1a"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-080514-3 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 EMBL:CR391962 IPI:IPI00972152
RefSeq:XP_003200294.1 UniGene:Dr.76866 PRIDE:F1Q9K1
Ensembl:ENSDART00000109259 GeneID:403020 KEGG:dre:403020 CTD:403020
NextBio:20816825 ArrayExpress:F1Q9K1 Bgee:F1Q9K1 Uniprot:F1Q9K1
Length = 1089
Score = 200 (75.5 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 38/128 (29%), Positives = 67/128 (52%)
Query: 110 DDSTFEAIEELNKASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQ 169
DD +++ K +E + E D E + ++ ++P++ WF + IH +E +
Sbjct: 405 DDQEDDSVTSGGKEDDEQSKAEVNRLIDSEDNVTEQTHHIIIPSYAAWFDYNSIHEIERR 464
Query: 170 ALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFL 229
ALP FFNGK++ +TP+IY+ RN+++ + NP + G + A V FL
Sbjct: 465 ALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFL 524
Query: 230 DYWGLINF 237
+ WGL+N+
Sbjct: 525 EQWGLVNY 532
Score = 160 (61.4 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 373 GVSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDD 431
G +GG+ WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+ D
Sbjct: 610 GAAGGRDWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDQYLESSD 669
Score = 150 (57.9 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 49/202 (24%), Positives = 83/202 (41%)
Query: 765 SGKNEPDQRVLSNSVAEPSP--PSKL----TNDVDMVSDPQPLENNEPEKQIXXXXXXXX 818
+GK +P + S+ +A +P P K T +D SD Q + E + +
Sbjct: 742 TGKVDPAFGLESSGIAGTAPEEPEKTEPTETEKMDTDSDSQQPDKAESKDEAEKPSESAE 801
Query: 819 XXXXAPKD-VEMVSTSLPSEINEPQQTDSITGT-ETARVEDQNRDGQDEKHDSKETKNDQ 876
K+ +E S P E E + ++ T E + +G++++ + +E K
Sbjct: 802 KPAETEKEKIETTEKSEPQEEEESEAGETKTAEKEKEEAMETTEEGKEDEEEQEEGKKKL 861
Query: 877 YID----KXXXXXXXXXXXXXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEM 932
+D EE +I+ L L+E Q++KLE KL F E+
Sbjct: 862 ELDIGEGNIATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLELKLRHFEEL 921
Query: 933 DNVTMRVREQLERSRQRLYQER 954
+ + R +E LE RQ+L ER
Sbjct: 922 ETIMDREKEALELQRQQLLTER 943
Score = 97 (39.2 bits), Expect = 4.0e-28, Sum P(3) = 4.0e-28
Identities = 45/174 (25%), Positives = 75/174 (43%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISG---NSPAMQLAAKHC 599
P P F++ GNPVM+ AFL + P + A+A+++L S PA +L H
Sbjct: 674 PLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALDEFSRVREEVPA-ELVEAHV 732
Query: 600 FILEDPPGDKKEVAHS---ESI-VAEMADRDIQKDETLEDINVKECNSASVLDERDLSND 655
+++ +V + ES +A A + +K E E + + +S S ++ S D
Sbjct: 733 KKVQEAARSTGKVDPAFGLESSGIAGTAPEEPEKTEPTETEKM-DTDSDSQQPDKAESKD 791
Query: 656 HGDKKIEDSV-PEE-KRHAASLNEK--PSEKLNGATGPANQDTPEKDEPGDLNE 705
+K E + P E ++ EK P E+ G EK+E + E
Sbjct: 792 EAEKPSESAEKPAETEKEKIETTEKSEPQEEEESEAGETKTAEKEKEEAMETTE 845
Score = 78 (32.5 bits), Expect = 3.7e-26, Sum P(3) = 3.7e-26
Identities = 33/102 (32%), Positives = 46/102 (45%)
Query: 438 KETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMET---SKP--EDASELKICED 492
K TD D + SKD AE S++ +T+ +ET S+P E+ SE +
Sbjct: 774 KMDTDSDSQQPDKAESKDEAE-KPSESAEKPAETEKEKIETTEKSEPQEEEESEAGETKT 832
Query: 493 TSKPKDESDVKVDEQMLKSEDTSEGKVGQET--GE-NIALKA 531
K K+E+ +E E+ EGK E GE NIA A
Sbjct: 833 AEKEKEEAMETTEEGKEDEEEQEEGKKKLELDIGEGNIATAA 874
Score = 68 (29.0 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 433 VDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICED 492
V+ ++K+ + A + G + + + + T A E +T P ET K + S+ + D
Sbjct: 728 VEAHVKKVQEAARSTGKVDPAFGLESSGIAGT-APEEPEKTEPTETEKMDTDSDSQQ-PD 785
Query: 493 TSKPKDESDVKVDEQMLKSEDTSEGKVGQETGE 525
++ KDE++ K E K +T + K+ ET E
Sbjct: 786 KAESKDEAE-KPSESAEKPAETEKEKI--ETTE 815
Score = 57 (25.1 bits), Expect = 5.4e-24, Sum P(3) = 5.4e-24
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 665 VPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESN 724
V E R ++ + +G G A ++ PEK EP + ++ + D+Q ES
Sbjct: 735 VQEAARSTGKVDPAFGLESSGIAGTAPEE-PEKTEPTETEKMD---TDSDSQQPDKAESK 790
Query: 725 DLPSKVLQSSQK 736
D K +S++K
Sbjct: 791 DEAEKPSESAEK 802
Score = 49 (22.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 281 AGPP----VAPMPSITFPAVPSGLFP 302
+GPP +APM P P+G++P
Sbjct: 1033 SGPPPQGGIAPMMGPRHPGPPNGMYP 1058
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 433 VDGNLKETTDDAPTNGDTSASKDVAEASESK 463
V G + DD + TS K+ E S+++
Sbjct: 396 VKGGIHNDLDDQEDDSVTSGGKEDDEQSKAE 426
>ASPGD|ASPL0000005061 [details] [associations]
symbol:AN6705 species:162425 "Emericella nidulans"
[GO:0016586 "RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015616 "DNA translocase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:BN001301 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACD01000112 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 RefSeq:XP_664309.1 ProteinModelPortal:Q5AYC5
STRING:Q5AYC5 EnsemblFungi:CADANIAT00007492 GeneID:2870489
KEGG:ani:AN6705.2 HOGENOM:HOG000180903 OMA:SKTPAVY Uniprot:Q5AYC5
Length = 681
Score = 210 (79.0 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 62/224 (27%), Positives = 102/224 (45%)
Query: 316 PAVEYHCNSCSADCSRKRYHCQKQ----------ADFDLCTDCFNNGKFGSDMSSSDFIL 365
P + C SC DC+R R+H K + +DLC +CF G+ S ++SDF+
Sbjct: 306 PKKKIQCFSCGIDCTRLRFHYAKSTPATGTAAPDSKYDLCPNCFLQGRMPSSHNASDFVK 365
Query: 366 MVPGEAAGVSGGK--WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIE 423
+ + + + W+D + ENW +IA HV T+T+ +C++ F+Q+ IE
Sbjct: 366 LEDSSYSRIPDREAPWSDSELLLLLEGLENFDENWEQIANHVGTRTREECVMKFLQLEIE 425
Query: 424 DMFLDCDDDVD-GNLKETTDDAPTNGDTSASKDVAEASE-SKTGAVEGQTQTSPMETSKP 481
D +L+ +V G +E N S +A+ +E S A G+ S +E K
Sbjct: 426 DQYLEDSPEVRAGPGREPVSHIE-NPVLSVVAFLAQMAEPSVAAAAAGR---SVVEIRK- 480
Query: 482 EDASELKICEDTSKPKDESDVKVDE---QMLKSEDTSEGKVGQE 522
E +L K +D+ K E +KSED+ + +E
Sbjct: 481 ELKKQLDKAPSADKSQDKGKEKEKEGSAAAVKSEDSMDVDTARE 524
Score = 191 (72.3 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 36/124 (29%), Positives = 67/124 (54%)
Query: 123 ASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDR 182
+ E+ A ++ +EA + ++ ++P++ WF IHP+E++AL FFNG+++ +
Sbjct: 79 SEEQTAQAKSSLEASARSHLVSQTHAIILPSYSTWFDMHTIHPIEKKALAEFFNGRNRSK 138
Query: 183 TPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFPH 242
TP +Y + R++++ + NPI + + G + A V FL+ WGLIN+ P
Sbjct: 139 TPAVYKDYRDFMINTYRLNPIEYLTVTACRRNLAGDVCAIMRVHSFLEQWGLINYQVDPQ 198
Query: 243 VESS 246
S
Sbjct: 199 TRPS 202
Score = 98 (39.6 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
EE ++ +L ++ + LQK E KL FNEM+ + R +LE +RQ+L+ +R
Sbjct: 560 EEREMTRLVSAAVNVTLQKFEIKLQQFNEMEEIIEAERRELELARQQLFLDR 611
Score = 71 (30.1 bits), Expect = 6.5e-19, Sum P(4) = 6.5e-19
Identities = 37/162 (22%), Positives = 71/162 (43%)
Query: 480 KPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTS----EGKVGQETGENIALKALREA 535
K ED+S +I D P +S++ + + L++ D + VG T E +K L+
Sbjct: 365 KLEDSSYSRI-PDREAPWSDSELLLLLEGLENFDENWEQIANHVGTRTREECVMKFLQLE 423
Query: 536 FEAVGYVPTHET---P--QSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSP 590
E + E P + + + NPV+++ AFL + P + A+A S+ I
Sbjct: 424 IEDQYLEDSPEVRAGPGREPVSHIENPVLSVVAFLAQMAEPSVAAAAAGRSVVEIRKELK 483
Query: 591 AMQLAAKHCFILEDPPGDKKEVAHSESIVAEMA-DRDIQKDE 631
A +D +K++ + ++ +E + D D ++E
Sbjct: 484 KQLDKAPSADKSQDKGKEKEKEGSAAAVKSEDSMDVDTAREE 525
Score = 41 (19.5 bits), Expect = 6.5e-19, Sum P(4) = 6.5e-19
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 406 ATKT-KAQCILHFVQMPIEDMFLDCDDDVDGNLKETTDDAPTNGDTSASKDVAEASE 461
AT T KA L + +D + V+ K+ ++ NG A+K + AS+
Sbjct: 248 ATPTNKADLNLEIRRNIYDDKGKEVTPAVEAKEKQANGESSANGTGDATKALDSASQ 304
>RGD|1597704 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
RGD:1597704 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 IPI:IPI00393081 RefSeq:XP_001055673.1
ProteinModelPortal:D4A510 PhosphoSite:D4A510
Ensembl:ENSRNOT00000028244 GeneID:685179 KEGG:rno:685179
UCSC:RGD:1597704 NextBio:729140 ArrayExpress:D4A510 Uniprot:D4A510
Length = 1135
Score = 191 (72.3 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 110 DDSTFEAIEELNKASEEWAAL---EAKIEADFEAIRSRDSNVHV-VPTHCGWFSWTKIHP 165
D+ E++E K +E + E AD + H+ VP++ WF + +H
Sbjct: 381 DEQDDESMETTGKDEDENSTGNKGEQTKSADLHEDNVTEQTHHIIVPSYAAWFDYNSVHA 440
Query: 166 LEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEV 225
+E +ALP FFNGK++ +TP+IY+ RN+++ + NP + G + A V
Sbjct: 441 IERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRV 500
Query: 226 MEFLDYWGLINF 237
FL+ WGLIN+
Sbjct: 501 HAFLEQWGLINY 512
Score = 146 (56.5 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 23/59 (38%), Positives = 41/59 (69%)
Query: 370 EAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLD 428
+AA + +WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+
Sbjct: 623 KAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE 681
Score = 109 (43.4 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
EE +I+ L L+E Q++KLE KL F E++ + R RE LE RQ+L +R
Sbjct: 911 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR 962
Score = 101 (40.6 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 49/195 (25%), Positives = 83/195 (42%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQ--LAAKHCF 600
P P F++ GNPVM+ AFL + P + +A+A+S+L+ S + L H
Sbjct: 689 PLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVR 748
Query: 601 ILEDPPG--DKKEVAHS-ESIVAEMADRDIQKDETLEDINVKECNSAS-VLDERDLSND- 655
+E+ K + A ES + +A + E +E+ +E + S DE+ +
Sbjct: 749 KVEEAAKVTGKADPAFGLES--SGIAGTASDEPERIEESGTEEARAESQAADEKKEPKEP 806
Query: 656 -HGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQD-----TPEKD-EPGDLNE--L 706
G +E+ EE A +E+ ++ + D PEKD EP + E L
Sbjct: 807 REGGGAVEEEAKEEISEAPKKDEEKGKEADSEKESEKSDGDPIVDPEKDKEPTEGQEEGL 866
Query: 707 SNPKSPKDNQPSIVE 721
P+ + + VE
Sbjct: 867 KEVAEPEGERKAKVE 881
Score = 67 (28.6 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 435 GNLKETTDDAPTNGDT-SASKDVAEASESKTGAVEGQTQTSPMETSKPEDASEL--KICE 491
G+ +E +D + D S +V E + KT + ++++P++ D E + E
Sbjct: 330 GHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQDDESME 389
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQET 523
T K +DE+ + KS D E V ++T
Sbjct: 390 TTGKDEDENSTGNKGEQTKSADLHEDNVTEQT 421
Score = 62 (26.9 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 28/121 (23%), Positives = 49/121 (40%)
Query: 616 ESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK--KIEDSVPEEKR--- 670
E + + + ++K E + K + A L+ ++ D+ +IE+S EE R
Sbjct: 736 EEVPTALVEAHVRKVEEAAKVTGK-ADPAFGLESSGIAGTASDEPERIEESGTEEARAES 794
Query: 671 HAASLNEKPSEKLNGATGPANQ------DTPEKDEPGDLNELSNPKSPKDNQPSIVEESN 724
AA ++P E G + + P+KDE S +S K + IV+
Sbjct: 795 QAADEKKEPKEPREGGGAVEEEAKEEISEAPKKDEEKGKEADSEKESEKSDGDPIVDPEK 854
Query: 725 D 725
D
Sbjct: 855 D 855
Score = 56 (24.8 bits), Expect = 5.7e-28, Sum P(4) = 5.7e-28
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 839 NEPQQTDSITGTETARVEDQNRDGQDEKHDSKETK 873
+EP++ + +GTE AR E Q DEK + KE +
Sbjct: 777 DEPERIEE-SGTEEARAESQ---AADEKKEPKEPR 807
Score = 56 (24.8 bits), Expect = 5.7e-28, Sum P(4) = 5.7e-28
Identities = 26/111 (23%), Positives = 45/111 (40%)
Query: 432 DVDGNLKET-TDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKIC 490
D ++E+ T++A + K + GAVE + + E K ++ +
Sbjct: 777 DEPERIEESGTEEARAESQAADEKKEPKEPREGGGAVEEEAKEEISEAPKKDEEKGKEAD 836
Query: 491 EDTSKPKDESDVKVDEQMLK--SEDTSEG--KVGQETGENIALKALREAFE 537
+ K + D VD + K +E EG +V + GE A K R+ E
Sbjct: 837 SEKESEKSDGDPIVDPEKDKEPTEGQEEGLKEVAEPEGERKA-KVERDIGE 886
Score = 46 (21.3 bits), Expect = 6.0e-27, Sum P(4) = 6.0e-27
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 451 SASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELK-ICEDTSKPKDESDVKVDEQML 509
+AS + ES T ++Q + E +P++ E E+ +K + K DE+
Sbjct: 774 TASDEPERIEESGTEEARAESQAAD-EKKEPKEPREGGGAVEEEAKEEISEAPKKDEEKG 832
Query: 510 KSEDTSEGKVGQETGENI 527
K D SE + + G+ I
Sbjct: 833 KEAD-SEKESEKSDGDPI 849
Score = 42 (19.8 bits), Expect = 2.1e-17, Sum P(4) = 2.1e-17
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 659 KKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNE--LSNPKSPKDNQ 716
K+++D VPE + L S+++ N K++P D+ L K N
Sbjct: 565 KELDDLVPEAAKGKPELQGSASQQM------LNFPDKGKEKPADMQNFGLRTDMYTKKNI 618
Query: 717 PS 718
PS
Sbjct: 619 PS 620
>TAIR|locus:2051028 [details] [associations]
symbol:SWI3B "switch subunit 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0040029 "regulation
of gene expression, epigenetic" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0007275 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 EMBL:AC002332 HSSP:P32591
eggNOG:COG5259 KO:K11649 OMA:LCARCYV EMBL:BT004085 EMBL:BT005094
IPI:IPI00525437 PIR:F84747 RefSeq:NP_180919.2 UniGene:At.43725
ProteinModelPortal:Q84JG2 SMR:Q84JG2 IntAct:Q84JG2 STRING:Q84JG2
PaxDb:Q84JG2 PRIDE:Q84JG2 EnsemblPlants:AT2G33610.1 GeneID:817927
KEGG:ath:AT2G33610 TAIR:At2g33610 HOGENOM:HOG000238867
InParanoid:Q84JG2 PhylomeDB:Q84JG2 ProtClustDB:CLSN2680010
Genevestigator:Q84JG2 Uniprot:Q84JG2
Length = 469
Score = 198 (74.8 bits), Expect = 3.2e-32, Sum P(4) = 3.2e-32
Identities = 45/140 (32%), Positives = 73/140 (52%)
Query: 120 LNKASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKS 179
L++ + AA +K A + S N+HV P++ WFSWT I+ E ++LP FF+ +S
Sbjct: 21 LSETTSGGAAAASK-SAQLPSSSSDIDNIHV-PSYSSWFSWTDINDCEVRSLPEFFDSRS 78
Query: 180 QDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFH- 238
+ P Y+ +RN I+K++ + +I D+ V + + + V +FLD WGLIN++
Sbjct: 79 SSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNS 138
Query: 239 -----PFPHVESSVANSDGD 253
P E S GD
Sbjct: 139 SASAKPLKWEEKEAGKSAGD 158
Score = 165 (63.1 bits), Expect = 3.2e-32, Sum P(4) = 3.2e-32
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 307 AEELAKLEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILM 366
A E A + +CN C A CS + C K D LC C+ + ++SS+F +
Sbjct: 160 ASEPATTVKETAKRNCNGCKAICSIACFACDKY-DLTLCARCYVRSNYRVGINSSEFKRV 218
Query: 367 VPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMF 426
E + S +W+D+ Y ++W ++A HV +T+ C+ FV++P + F
Sbjct: 219 ---EISEESKPEWSDKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQF 275
Query: 427 LDCDDDVDG 435
+ D DG
Sbjct: 276 VKESDSEDG 284
Score = 89 (36.4 bits), Expect = 3.2e-32, Sum P(4) = 3.2e-32
Identities = 23/83 (27%), Positives = 47/83 (56%)
Query: 506 EQMLKSEDTSEG-KVGQETGENIALKALREAFEAVGYVPTHETPQS-FAEVGNPVMALAA 563
EQ +K D+ +G ++ + ++ ++ E + G P + A+ NP+MA AA
Sbjct: 273 EQFVKESDSEDGLEMFDQIKDSDIPES--EGIDKDGSSPNKRIKLTPLADASNPIMAQAA 330
Query: 564 FLTLLGGPDLTTASARSSLKSIS 586
FL+ L G ++ A+AR++++++S
Sbjct: 331 FLSALAGTNVAEAAARAAVRALS 353
Score = 67 (28.6 bits), Expect = 3.2e-32, Sum P(4) = 3.2e-32
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 902 QEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
+EE ++ +E +++K+ ++ F ++D R R+QLE R L+ ++
Sbjct: 398 KEEHEVEGAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLFVDQ 450
>UNIPROTKB|F1PVA9 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:AAEX03006920 Ensembl:ENSCAFT00000000173
Uniprot:F1PVA9
Length = 1092
Score = 185 (70.2 bits), Expect = 8.3e-32, Sum P(4) = 8.3e-32
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 150 VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELK 209
++P++ WF + +H +E +ALP FFNGK++ +TP+IY+ RN+++ + NP +
Sbjct: 418 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 477
Query: 210 DLSELEVGSLDARQEVMEFLDYWGLINF 237
G + A V FL+ WGLIN+
Sbjct: 478 ACRRNLAGDVCAIMRVHAFLEQWGLINY 505
Score = 146 (56.5 bits), Expect = 8.3e-32, Sum P(4) = 8.3e-32
Identities = 23/59 (38%), Positives = 41/59 (69%)
Query: 370 EAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLD 428
+AA + +WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+
Sbjct: 585 KAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE 643
Score = 109 (43.4 bits), Expect = 8.3e-32, Sum P(4) = 8.3e-32
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
EE +I+ L L+E Q++KLE KL F E++ + R RE LE RQ+L +R
Sbjct: 873 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR 924
Score = 99 (39.9 bits), Expect = 8.3e-32, Sum P(4) = 8.3e-32
Identities = 42/185 (22%), Positives = 80/185 (43%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQ--LAAKHCF 600
P P F++ GNPVM+ AFL + P + +A+A+S+L+ S + L H
Sbjct: 651 PLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVR 710
Query: 601 ILEDPPG--DKKEVAHS-ESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHG 657
+E+ K + A ES + +A + E +E+ E + E +
Sbjct: 711 KVEEAAKVTGKADPAFGLES--SGIAGTTSDEPERIEESGTDEARAEGQATE-EKKEPKE 767
Query: 658 DKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQP 717
++ + EE + S K E+ G G + +++ EK + + + K PK+ Q
Sbjct: 768 PREGGGATEEETKEKTSEVPKKDEE-RGKQGDSEKES-EKSDGDPIVDPDKEKEPKEGQE 825
Query: 718 SIVEE 722
++++
Sbjct: 826 EVLKD 830
Score = 70 (29.7 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 49/210 (23%), Positives = 87/210 (41%)
Query: 590 PAMQLAAKHCFILEDPPG-DKKEVAHSESIVAE------MADRDIQKDETLEDINVKECN 642
PA ++ A +ED P +K H++ I+ M + D + ++ ++ ++
Sbjct: 210 PASEIEAS----VEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKSPVSRRKKI 265
Query: 643 SASVL-DE-RDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEK--- 697
SA L DE +D DKK + + KR + ++K N GP+ T K
Sbjct: 266 SAKTLTDEVNSPDSDRRDKK-GGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGH 324
Query: 698 --DEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKD 755
+E DL + + SP N VEE LP K + + + +D ++D
Sbjct: 325 REEEQEDLTKDMDEPSPVPN----VEEVT-LP-KTVNTKKDSESAPVKGGTMTDLDEQED 378
Query: 756 NSLLSDSLPSGKNEPDQRVLSNSVAEPSPP 785
S+ + +GK+E D+ + N + P
Sbjct: 379 ESMET----TGKDE-DENSMGNKGEQTKNP 403
Score = 69 (29.3 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 435 GNLKETTDDAPTNGDT-SASKDVAEASESKTGAVEGQTQTSPME--TSKPEDASELKICE 491
G+ +E +D + D S +V E + KT + ++++P++ T D E + E
Sbjct: 323 GHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESME 382
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFE--AVGYVPTHETPQ 549
T K +DE+ + + K+ D E V ++T +I + + F+ +V + P+
Sbjct: 383 TTGKDEDENSMGNKGEQTKNPDLHEDNVTEQT-HHIIIPSYAAWFDYNSVHAIERRALPE 441
Query: 550 SF 551
F
Sbjct: 442 FF 443
Score = 65 (27.9 bits), Expect = 2.5e-28, Sum P(4) = 2.5e-28
Identities = 33/135 (24%), Positives = 57/135 (42%)
Query: 432 DVDGNLKET-TDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKIC 490
D ++E+ TD+A G + K + GA E +T+ E K ++ +
Sbjct: 739 DEPERIEESGTDEARAEGQATEEKKEPKEPREGGGATEEETKEKTSEVPKKDEERGKQ-- 796
Query: 491 EDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQS 550
D+ K ++SD + ++ + E K GQE + L++ E+ G T + +
Sbjct: 797 GDSEKESEKSD---GDPIVDPDKEKEPKEGQE-------EVLKDMVESEGERKT-KVERD 845
Query: 551 FAEVGNPVMALAAFL 565
E GN A AA L
Sbjct: 846 IGE-GNLSTAAAAAL 859
Score = 59 (25.8 bits), Expect = 1.0e-27, Sum P(4) = 1.0e-27
Identities = 22/80 (27%), Positives = 32/80 (40%)
Query: 448 GDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQ 507
G TS + E S + EGQ E +P + E+ +K K K DE+
Sbjct: 735 GTTSDEPERIEESGTDEARAEGQATEEKKEPKEPREGGGAT--EEETKEKTSEVPKKDEE 792
Query: 508 MLKSEDTSEGKVGQETGENI 527
K D SE + + G+ I
Sbjct: 793 RGKQGD-SEKESEKSDGDPI 811
Score = 48 (22.0 bits), Expect = 1.4e-26, Sum P(4) = 1.4e-26
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 839 NEPQQTDSITGTETARVEDQNRDGQDEKHDSKETK 873
+EP++ + +GT+ AR E Q +EK + KE +
Sbjct: 739 DEPERIEE-SGTDEARAEGQ---ATEEKKEPKEPR 769
Score = 42 (19.8 bits), Expect = 5.7e-26, Sum P(4) = 5.7e-26
Identities = 36/176 (20%), Positives = 68/176 (38%)
Query: 635 DINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEK--PSEKL--NGATGPA 690
D V + S L+E + + ++ + AA + K P+ L +G G
Sbjct: 678 DPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTT 737
Query: 691 NQDTPEK-DEPGD---------LNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXX 740
+ D PE+ +E G E PK P++ + EE+ + S+V + ++
Sbjct: 738 S-DEPERIEESGTDEARAEGQATEEKKEPKEPREGGGATEEETKEKTSEVPKKDEERGKQ 796
Query: 741 XXXXXPAPPVDVEKDNSLLSDSLPSGKNEP---DQRVLSNSV-AEPSPPSKLTNDV 792
+ + D + D P + EP + VL + V +E +K+ D+
Sbjct: 797 GDSEKESE----KSDGDPIVD--PDKEKEPKEGQEEVLKDMVESEGERKTKVERDI 846
>UNIPROTKB|Q92922 [details] [associations]
symbol:SMARCC1 "SWI/SNF complex subunit SMARCC1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0047485 "protein N-terminus binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0071564 "npBAF complex" evidence=ISS] [GO:0071565 "nBAF
complex" evidence=ISS] [GO:0071778 "WINAC complex" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0006337 "nucleosome disassembly"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0003713 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884 PROSITE:PS51293
Pathway_Interaction_DB:ar_tf_pathway SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 EMBL:U66615
EMBL:BC039843 EMBL:BC065253 EMBL:BC113465 EMBL:BC117213
IPI:IPI00234252 RefSeq:NP_003065.3 UniGene:Hs.476179 PDB:2YUS
PDBsum:2YUS ProteinModelPortal:Q92922 SMR:Q92922 DIP:DIP-27545N
DIP:DIP-33044N IntAct:Q92922 MINT:MINT-1137868 STRING:Q92922
PhosphoSite:Q92922 DMDM:209572723 PaxDb:Q92922 PRIDE:Q92922
DNASU:6599 Ensembl:ENST00000254480 GeneID:6599 KEGG:hsa:6599
UCSC:uc003crq.2 CTD:6599 GeneCards:GC03M047626 H-InvDB:HIX0030795
HGNC:HGNC:11104 HPA:CAB011576 HPA:CAB016336 HPA:HPA024352
HPA:HPA026853 MIM:601732 neXtProt:NX_Q92922 PharmGKB:PA35954
HOGENOM:HOG000047736 HOVERGEN:HBG054849 InParanoid:Q92922 KO:K11649
OMA:YKKYVHA OrthoDB:EOG4V9TSW PhylomeDB:Q92922 ChiTaRS:SMARCC1
EvolutionaryTrace:Q92922 GenomeRNAi:6599 NextBio:25671
ArrayExpress:Q92922 Bgee:Q92922 CleanEx:HS_SMARCC1
Genevestigator:Q92922 GermOnline:ENSG00000173473 Uniprot:Q92922
Length = 1105
Score = 189 (71.6 bits), Expect = 9.7e-31, Sum P(3) = 9.7e-31
Identities = 40/133 (30%), Positives = 67/133 (50%)
Query: 110 DDSTFEAIEELNKASEEWAALEAKIEADF-EAIRSRDSNVHVVPTHCGWFSWTKIHPLEE 168
D+ E + K E+ A + D E + +N ++P++ WF + IH +E
Sbjct: 409 DEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNVTEQTNHIIIPSYASWFDYNCIHVIER 468
Query: 169 QALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEF 228
+ALP FFNGK++ +TP+IY+ RN+++ + NP + G + A V F
Sbjct: 469 RALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAF 528
Query: 229 LDYWGLINFHPFP 241
L+ WGL+N+ P
Sbjct: 529 LEQWGLVNYQVDP 541
Score = 154 (59.3 bits), Expect = 9.7e-31, Sum P(3) = 9.7e-31
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 370 EAAGVSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLD 428
++ G S G+ WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+
Sbjct: 613 KSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE 672
Query: 429 CDD 431
D
Sbjct: 673 NSD 675
Score = 140 (54.3 bits), Expect = 9.7e-31, Sum P(3) = 9.7e-31
Identities = 49/197 (24%), Positives = 83/197 (42%)
Query: 765 SGKNEPDQRVLSNSVAEPSP--PSKL--TNDVDMVSDPQPLENNEPEKQIXXXXXXXXXX 820
SGK +P + S+ +A P P KL + M +DP + +PEK
Sbjct: 748 SGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADP---DGQQPEKAENKVENETDEG 804
Query: 821 XXAPKDVEMVSTS---LPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQY 877
A +D E S SE++E +++ E + D ++ + + K+ +++
Sbjct: 805 DKA-QDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDT-GKKKVEHEIS 862
Query: 878 IDKXXXXXXXXXXXXXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTM 937
EE +I+ L L+E Q++KLE KL F E++ +
Sbjct: 863 EGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMD 922
Query: 938 RVREQLERSRQRLYQER 954
R +E LE+ RQ+L ER
Sbjct: 923 REKEALEQQRQQLLTER 939
Score = 97 (39.2 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 38/170 (22%), Positives = 77/170 (45%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISG--NSPAMQLAAKHCF 600
P P F++ GNPVM+ AFL + P + +A+A+++L+ S ++L H
Sbjct: 680 PLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVK 739
Query: 601 ILEDPPGDKKEVAHSESIVAE-MADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK 659
+++ +V + + + +A + E LE ++ + D + +
Sbjct: 740 KVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEA----DPDGQQPEKAEN 795
Query: 660 KIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLN-ELSN 708
K+E+ E + NEK SEK + ++DT +++ + N EL++
Sbjct: 796 KVENETDEGDKAQDGENEKNSEKEQDSE--VSEDTKSEEKETEENKELTD 843
Score = 56 (24.8 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 428 DCDDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTG--AVEGQTQTSPMETSKPEDAS 485
D + ++G +E + P +++ E +E+ G A +G+ + + S+ E S
Sbjct: 768 DEPEKLEGAEEEKMEADPDGQQPEKAENKVE-NETDEGDKAQDGENE----KNSEKEQDS 822
Query: 486 ELKICEDT-SKPKDESDVK--VDEQMLKSEDTSEGKVGQETGE-NIALKA 531
E + EDT S+ K+ + K D + DT + KV E E N+A A
Sbjct: 823 E--VSEDTKSEEKETEENKELTDTCKERESDTGKKKVEHEISEGNVATAA 870
Score = 56 (24.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 436 NLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTS 494
NLK+ +++ P G T A D + G E + + S+ D E + E T+
Sbjct: 390 NLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKG-DQSRSVDLGEDNVTEQTN 447
Score = 53 (23.7 bits), Expect = 9.4e-22, Sum P(3) = 9.4e-22
Identities = 24/102 (23%), Positives = 42/102 (41%)
Query: 604 DPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIED 663
D P +K E A E + A D D Q+ E E+ E + +D N+ +K +D
Sbjct: 768 DEP-EKLEGAEEEKMEA---DPDGQQPEKAENKVENETDEGD--KAQDGENEKNSEKEQD 821
Query: 664 SVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNE 705
S E + + +++L DT +K +++E
Sbjct: 822 SEVSEDTKSEEKETEENKELTDTCKERESDTGKKKVEHEISE 863
Score = 51 (23.0 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 473 TSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGEN 526
T P E K E A E K+ D P + K + ++ +T EG Q+ GEN
Sbjct: 765 TGPDEPEKLEGAEEEKMEAD---PDGQQPEKAENKV--ENETDEGDKAQD-GEN 812
Score = 49 (22.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 33/139 (23%), Positives = 55/139 (39%)
Query: 653 SNDHGDKKIEDS-VPEE--KRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNP 709
SND D +IED +PE+ K H + + ++ N + + E +P +
Sbjct: 246 SNDV-DAEIEDPPIPEKPWKVHVKWILD--TDIFNEWMNEEDYEVDENRKPVSFRQRI-- 300
Query: 710 KSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSL----PS 765
S K+ +P E D K +++K P P +K SL S
Sbjct: 301 -STKNEEPVRSPERRD--RKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRS 357
Query: 766 GKNEPDQRVLSNSVAEPSP 784
K E +Q L+ + +P+P
Sbjct: 358 QKEEDEQEDLTKDMEDPTP 376
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 422 IEDMFLDCDDDVDGNLKETTDDAPTNGDTSASKDVAE 458
+ D+ ++ V KE D+ P GD S S D+ E
Sbjct: 405 VADLDEQDEETVTAGGKE--DEDPAKGDQSRSVDLGE 439
>ZFIN|ZDB-GENE-060503-273 [details] [associations]
symbol:smarcc1b "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily c,
member 1b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-060503-273 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CR626876 EMBL:CR626877 IPI:IPI00972005
Ensembl:ENSDART00000085619 Bgee:E7FAW0 Uniprot:E7FAW0
Length = 961
Score = 189 (71.6 bits), Expect = 1.8e-30, Sum P(4) = 1.8e-30
Identities = 37/101 (36%), Positives = 55/101 (54%)
Query: 139 EAIRSRDSNVH--VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMK 196
E S H +VPT+ WF + IH +E +ALP FFNGK++ +TP+IY+ RN+++
Sbjct: 413 EGEESATEQTHHIIVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMID 472
Query: 197 KFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINF 237
+ NP + G + A V FL+ WGLIN+
Sbjct: 473 TYRLNPQEYLTSTSSRRNLTGDVCALIRVHSFLEQWGLINY 513
Score = 150 (57.9 bits), Expect = 1.8e-30, Sum P(4) = 1.8e-30
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 361 SDFILMVPGEAAGVSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQ 419
SD ++ G S G+ WT+Q YK++WN+++EHV ++T+ CILHF++
Sbjct: 579 SDIYAKKHPKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLR 638
Query: 420 MPIEDMFLD 428
+PIED +L+
Sbjct: 639 LPIEDPYLE 647
Score = 114 (45.2 bits), Expect = 1.8e-30, Sum P(4) = 1.8e-30
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQERAL--IIQA 960
EE +I+ L L+E Q++KLE KL F E++ + R +E LE+ RQ+L ER + Q
Sbjct: 844 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQTFHLEQV 903
Query: 961 RLGPSRVMQ 969
+ +V Q
Sbjct: 904 KYAEQKVRQ 912
Score = 70 (29.7 bits), Expect = 1.8e-30, Sum P(4) = 1.8e-30
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSIS 586
P P F++ GNPVM+ AFL + + +A+A+++L+ S
Sbjct: 655 PLAYQPVPFSQSGNPVMSTVAFLASVVDSRVASAAAKAALEEFS 698
Score = 38 (18.4 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 436 NLKETTDDAPTNGDTSASKDVAE 458
NLK+ +++ P G A D E
Sbjct: 370 NLKKDSENTPVKGGIMADLDDQE 392
>RGD|1304850 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10116 "Rattus norvegicus" [GO:0001741 "XY body"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0008286 "insulin receptor signaling
pathway" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0071778
"WINAC complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 RGD:1304850
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 IPI:IPI00764046
Ensembl:ENSRNOT00000028250 ArrayExpress:D4A4J7 Uniprot:D4A4J7
Length = 1086
Score = 192 (72.6 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 110 DDSTFEAIEELNKASEEWAALEAKIEADF-EAIRSRDSNVHVVPTHCGWFSWTKIHPLEE 168
D+ EA+ K E+ + + AD E + +N ++P++ WF + IH +E
Sbjct: 408 DEQDEEAVTTGGKEDEDPSKGDPSRSADAGEDNVTEQTNHIIIPSYASWFDYNCIHVIER 467
Query: 169 QALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEF 228
+ALP FFNGK++ +TP+IY+ RN+++ + NP + G + A V F
Sbjct: 468 RALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAF 527
Query: 229 LDYWGLINFHPFP 241
L+ WGL+N+ P
Sbjct: 528 LEQWGLVNYQVDP 540
Score = 154 (59.3 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 370 EAAGVSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLD 428
++ G S G+ WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+
Sbjct: 612 KSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE 671
Query: 429 CDD 431
D
Sbjct: 672 NSD 674
Score = 133 (51.9 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 50/201 (24%), Positives = 80/201 (39%)
Query: 765 SGKNEPDQRVLSNSVAEPSP--PSKLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXX 822
SGK +P + S+ +A P P KL + + P + +PEK
Sbjct: 747 SGKVDPTYGLESSCIAGTGPDEPEKLEGSEEEKMETDP-DGQQPEKAENKGENESDEGDK 805
Query: 823 APKDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQYIDKX- 881
+D E +E N ++ DS T + E +N + ++ KE ++D K
Sbjct: 806 I-QDGE-------NEKNSEKERDSDTSEDVKPEEKENEENKELTDTCKERESDTGKKKVE 857
Query: 882 --------XXXXXXXXXXXXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMD 933
EE +I+ L L+E Q++KLE KL F E++
Sbjct: 858 HEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELE 917
Query: 934 NVTMRVREQLERSRQRLYQER 954
+ R +E LE+ RQ+L ER
Sbjct: 918 TIMDREKEALEQQRQQLLTER 938
Score = 94 (38.1 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 45/177 (25%), Positives = 79/177 (44%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFIL 602
P P F++ GNPVM+ AFL + P + +A+A+++L+ S +
Sbjct: 679 PLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSR-------------VR 725
Query: 603 EDPPGDKKEVAHSESIVAEMADRDIQKDET--LEDINVKECNSASVLDERDLSNDHGDKK 660
E+ P + E AH + V E A + D T LE C + + DE + ++K
Sbjct: 726 EEVPLELVE-AHVKK-VQEAARASGKVDPTYGLES----SCIAGTGPDEPEKLEGSEEEK 779
Query: 661 IE-DSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQ 716
+E D ++ A + E S++ + N+ EK+ D +E P+ K+N+
Sbjct: 780 METDPDGQQPEKAENKGENESDEGDKIQDGENEKNSEKERDSDTSEDVKPEE-KENE 835
Score = 63 (27.2 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 436 NLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTS 494
N K+ +++ P G T A D + TG E + S + S+ DA E + E T+
Sbjct: 389 NPKKDSENTPVKGGTVADLDEQDEEAVTTGGKEDE-DPSKGDPSRSADAGEDNVTEQTN 446
Score = 56 (24.8 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 428 DCDDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTG--AVEGQTQTSPMETSKPEDAS 485
D + ++G+ +E + P +++ E +ES G +G+ + + E + D S
Sbjct: 767 DEPEKLEGSEEEKMETDPDGQQPEKAENKGE-NESDEGDKIQDGENEKNS-EKERDSDTS 824
Query: 486 ELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGE-NIALKA 531
E E+ K +E+ D + DT + KV E E N+A A
Sbjct: 825 EDVKPEE--KENEENKELTDTCKERESDTGKKKVEHEISEGNVATAA 869
Score = 53 (23.7 bits), Expect = 4.2e-22, Sum P(3) = 4.2e-22
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 603 EDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSAS-VLDERDLSNDHGDKKI 661
E GDK + +E + D D +D E+ +E + ER+ +D G KK+
Sbjct: 799 ESDEGDKIQDGENEKNSEKERDSDTSEDVKPEEKENEENKELTDTCKERE--SDTGKKKV 856
Query: 662 EDSVPE 667
E + E
Sbjct: 857 EHEISE 862
Score = 53 (23.7 bits), Expect = 4.2e-22, Sum P(3) = 4.2e-22
Identities = 34/126 (26%), Positives = 52/126 (41%)
Query: 445 PTNG-DTSASKDVA-EASESKTGAVEGQTQTSP--METSKPEDASELKICEDTSKPKDES 500
PT G ++S + E G+ E + +T P + K E+ E + ++ K +D
Sbjct: 752 PTYGLESSCIAGTGPDEPEKLEGSEEEKMETDPDGQQPEKAENKGENE-SDEGDKIQDGE 810
Query: 501 DVKVDEQMLKSEDTSEGKVGQETGENIALKALREAF-EAVGYVPTHETPQSFAEVGNPVM 559
+ K E+ + DTSE V E EN K L + E + +E GN
Sbjct: 811 NEKNSEKE-RDSDTSED-VKPEEKENEENKELTDTCKERESDTGKKKVEHEISE-GNVAT 867
Query: 560 ALAAFL 565
A AA L
Sbjct: 868 AAAAAL 873
Score = 49 (22.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/116 (20%), Positives = 50/116 (43%)
Query: 622 MADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASL---NEK 678
M + D + DE + ++ ++ S +E S + ++K + +++H+ S
Sbjct: 279 MNEEDYEVDENRKPVSFRQRISTKN-EEPVRSPERRERKASANA-RKRKHSPSPPPPTAT 336
Query: 679 PSEKLNGATGPAN-----QDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSK 729
S K +G G A+ ++ ++DE DL + +P N ++ N P K
Sbjct: 337 ESRKKSGKKGQASLYGKRRNQKDEDEQEDLTKDMEDPTPVPNIEEVLLPKNVNPKK 392
Score = 37 (18.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 284 PVAPMPSITFPAVPSGLFP 302
P PMP P V + + P
Sbjct: 1024 PGQPMPGRMIPTVAANIHP 1042
>UNIPROTKB|G4MV88 [details] [associations]
symbol:MGG_01720 "Transcription regulatory protein SWI3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:CM001232 KO:K11649 RefSeq:XP_003714717.1
ProteinModelPortal:G4MV88 EnsemblFungi:MGG_01720T0 GeneID:2679776
KEGG:mgr:MGG_01720 Uniprot:G4MV88
Length = 704
Score = 178 (67.7 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 314 EGPAVEYHCNSCSADCSRKRYH-CQKQADF-----DLCTDCFNNGKFGSDMSSSDFILMV 367
+ P + C +C DC+R+ YH Q + +LC C+ + + + + + M
Sbjct: 337 KAPISKVTCFTCGKDCTREYYHKVQTEGGANVPKKELCPGCYASSRMDAKEDNMGYEKME 396
Query: 368 -PGEAAGVSG-GKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDM 425
P A V WTD+ Y E+W EIA HV T+T+ +C LHF+Q+ IED
Sbjct: 397 NPQYPATVDREAPWTDEETVRLLEALQKYDEDWGEIANHVGTRTREECALHFLQLDIEDK 456
Query: 426 FLDCD 430
+LD +
Sbjct: 457 YLDTE 461
Score = 162 (62.1 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 35/117 (29%), Positives = 63/117 (53%)
Query: 121 NKASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQ 180
N A +E + E A E + S+ + V+P++ WF I+ +E++ALP FFN +++
Sbjct: 110 NGAGQESKSKETLENAAREHLISQTYAI-VLPSYTVWFDMNAINNIEKKALPEFFNSRNR 168
Query: 181 DRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINF 237
+TP +Y + R++++ + NP + + G + A V FL+ WGLIN+
Sbjct: 169 SKTPAVYKDYRDFMINTYRLNPAEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLINY 225
Score = 117 (46.2 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
EE ++ +L ++ + LQK++ KL FFN+M++V R +LER+RQ+LY +R
Sbjct: 589 EEREMTRLVSAAVNVTLQKVDMKLKFFNDMESVLQAERRELERARQQLYLDR 640
Score = 56 (24.8 bits), Expect = 4.0e-30, Sum P(4) = 4.0e-30
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 551 FAEVGNPVMALAAFLTLLGGP-DLTTASARS 580
F+ NP++++ AFL L P + +A+ RS
Sbjct: 482 FSHADNPILSVVAFLATLADPTSVASAAGRS 512
Score = 43 (20.2 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 110 DDSTFEAIEELNKASEEWAAL 130
D+ T +E L K E+W +
Sbjct: 412 DEETVRLLEALQKYDEDWGEI 432
Score = 43 (20.2 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 16/76 (21%), Positives = 32/76 (42%)
Query: 439 ETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSK-PEDASELKICEDTSKPK 497
+ +++ PT ++E + + T +P T++ P DA E P
Sbjct: 27 QESENQPTAPKAPEDVQMSEGISADPPIKQDSTTPAPPPTAENPIDAPE-------GPPA 79
Query: 498 DESDVKVDEQMLKSED 513
+ + + DE+M S+D
Sbjct: 80 ETTGAREDEEMRDSQD 95
>MGI|MGI:1203524 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10090 "Mus musculus" [GO:0001741 "XY body" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006323 "DNA packaging" evidence=TAS] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1203524 GO:GO:0008286 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0006323 GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 CTD:6599
HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649 OMA:YKKYVHA
EMBL:U85614 EMBL:BC052423 EMBL:BC053064 IPI:IPI00125662
IPI:IPI00515361 PIR:T30967 RefSeq:NP_033237.2 UniGene:Mm.85410
ProteinModelPortal:P97496 SMR:P97496 DIP:DIP-39986N IntAct:P97496
MINT:MINT-4084777 STRING:P97496 PhosphoSite:P97496 PaxDb:P97496
PRIDE:P97496 Ensembl:ENSMUST00000088716 Ensembl:ENSMUST00000111969
GeneID:20588 KEGG:mmu:20588 UCSC:uc009rto.1 UCSC:uc009rtp.1
GeneTree:ENSGT00390000018166 InParanoid:P97496 OrthoDB:EOG4JHCF5
NextBio:298891 Bgee:P97496 Genevestigator:P97496
GermOnline:ENSMUSG00000032481 Uniprot:P97496
Length = 1104
Score = 187 (70.9 bits), Expect = 4.1e-30, Sum P(3) = 4.1e-30
Identities = 40/133 (30%), Positives = 68/133 (51%)
Query: 110 DDSTFEAIEELNKASEEWAALEAKIEAD-FEAIRSRDSNVHVVPTHCGWFSWTKIHPLEE 168
D+ EA+ K E+ + + D E + +N ++P++ WF + IH +E
Sbjct: 408 DEQDEEAVTTGGKEDEDPSKGDPSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIER 467
Query: 169 QALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEF 228
+ALP FFNGK++ +TP+IY+ RN+++ + NP + G + A V F
Sbjct: 468 RALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAF 527
Query: 229 LDYWGLINFHPFP 241
L+ WGL+N+ P
Sbjct: 528 LEQWGLVNYQVDP 540
Score = 154 (59.3 bits), Expect = 4.1e-30, Sum P(3) = 4.1e-30
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 370 EAAGVSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLD 428
++ G S G+ WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+
Sbjct: 612 KSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE 671
Query: 429 CDD 431
D
Sbjct: 672 NSD 674
Score = 136 (52.9 bits), Expect = 4.1e-30, Sum P(3) = 4.1e-30
Identities = 42/194 (21%), Positives = 80/194 (41%)
Query: 765 SGKNEPDQRVLSNSVAEPSP--PSKL--TNDVDMVSDPQPLENNEPEKQIXXXXXXXXXX 820
SGK +P + S+ +A P P KL + + M +DP + + E ++
Sbjct: 747 SGKVDPTYGLESSCIAGTGPDEPEKLEGSEEEKMETDPDGQQPEKAENKVENESDEGDKI 806
Query: 821 XXAPKDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQYIDK 880
+ + S+++E + + E + D ++ + + K+ +++
Sbjct: 807 QDRENE-KNTEKEQDSDVSEDVKPEEKENEENKELTDTCKERESDA-GKKKVEHEISEGN 864
Query: 881 XXXXXXXXXXXXXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVR 940
EE +I+ L L+E Q++KLE KL F E++ + R +
Sbjct: 865 VATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREK 924
Query: 941 EQLERSRQRLYQER 954
E LE+ RQ+L ER
Sbjct: 925 EALEQQRQQLLTER 938
Score = 95 (38.5 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFIL 602
P P F++ GNPVM+ AFL + P + +A+A+++L+ S +
Sbjct: 679 PLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSR-------------VR 725
Query: 603 EDPPGDKKEVAHSESIVAEMADRDIQKDET--LEDINVKECNSASVLDERDLSNDHGDKK 660
E+ P + E AH + V E A + D T LE C + + DE + ++K
Sbjct: 726 EEVPLELVE-AHVKK-VQEAARASGKVDPTYGLES----SCIAGTGPDEPEKLEGSEEEK 779
Query: 661 IE-DSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQ 716
+E D ++ A + E S++ + N+ EK++ D++E P+ K+N+
Sbjct: 780 METDPDGQQPEKAENKVENESDEGDKIQDRENEKNTEKEQDSDVSEDVKPEE-KENE 835
Score = 58 (25.5 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 603 EDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSAS-VLDERDLSNDHGDKKI 661
E GDK + +E + D D+ +D E+ +E + ER+ +D G KK+
Sbjct: 799 ESDEGDKIQDRENEKNTEKEQDSDVSEDVKPEEKENEENKELTDTCKERE--SDAGKKKV 856
Query: 662 EDSVPE 667
E + E
Sbjct: 857 EHEISE 862
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 436 NLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTS 494
N K+ +++ P G T A D + TG E + S + S+ D E + E T+
Sbjct: 389 NPKKDSENTPVKGGTVADLDEQDEEAVTTGGKEDE-DPSKGDPSRSVDPGEDNVTEQTN 446
Score = 55 (24.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/117 (24%), Positives = 47/117 (40%)
Query: 622 MADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEKP-- 679
M + D + DE + ++ ++ S +E S + D+K S KR + P
Sbjct: 279 MNEEDYEVDENRKPVSFRQRISTKN-EEPVRSPERRDRKA--SANSRKRKPSPSPPPPTA 335
Query: 680 --SEKLNGATGPAN-----QDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSK 729
S K +G G A+ + E+DE DL + +P N +V N P K
Sbjct: 336 TESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKK 392
Score = 52 (23.4 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 36/127 (28%), Positives = 54/127 (42%)
Query: 445 PTNG-DTSASKDVA-EASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDV 502
PT G ++S + E G+ E + +T P + +PE A E K+ E+ S D+
Sbjct: 752 PTYGLESSCIAGTGPDEPEKLEGSEEEKMETDP-DGQQPEKA-ENKV-ENESDEGDKIQD 808
Query: 503 KVDEQMLKSE---DTSEGKVGQETGENIALKALREAF-EAVGYVPTHETPQSFAEVGNPV 558
+ +E+ + E D SE V E EN K L + E + +E GN
Sbjct: 809 RENEKNTEKEQDSDVSED-VKPEEKENEENKELTDTCKERESDAGKKKVEHEISE-GNVA 866
Query: 559 MALAAFL 565
A AA L
Sbjct: 867 TAAAAAL 873
Score = 43 (20.2 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 659 KKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPS 718
+K+E S EEK ++P EK N+ E DE + + N K+ + Q S
Sbjct: 770 EKLEGS-EEEKMETDPDGQQP-EKAE------NKVENESDEGDKIQDRENEKNTEKEQDS 821
Query: 719 IVEE 722
V E
Sbjct: 822 DVSE 825
Score = 42 (19.8 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 22/95 (23%), Positives = 36/95 (37%)
Query: 687 TGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXP 746
TGP D PEK E + ++ P QP E +KV S +
Sbjct: 764 TGP---DEPEKLEGSEEEKMET--DPDGQQPEKAE------NKVENESDEGDKIQDRENE 812
Query: 747 APPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAE 781
+ E+D+ + D P K + + L+++ E
Sbjct: 813 KN-TEKEQDSDVSEDVKPEEKENEENKELTDTCKE 846
Score = 41 (19.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 284 PVAPMPSITFPAVPSGLFP 302
P PMP PAV + + P
Sbjct: 1025 PGQPMPGRMIPAVAANIHP 1043
>TAIR|locus:2043263 [details] [associations]
symbol:SWI3A "SWITCH/sucrose nonfermenting 3A"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0016514 "SWI/SNF complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
EMBL:AC002535 HSSP:P32591 eggNOG:COG5259 KO:K11649 EMBL:AY062794
EMBL:AY081570 IPI:IPI00529579 PIR:T00422 RefSeq:NP_850476.1
UniGene:At.27229 ProteinModelPortal:Q8W475 SMR:Q8W475 IntAct:Q8W475
STRING:Q8W475 PaxDb:Q8W475 PRIDE:Q8W475 EnsemblPlants:AT2G47620.1
GeneID:819375 KEGG:ath:AT2G47620 TAIR:At2g47620
HOGENOM:HOG000083881 InParanoid:Q8W475 OMA:SCPKEIF PhylomeDB:Q8W475
ProtClustDB:CLSN2680302 Genevestigator:Q8W475 Uniprot:Q8W475
Length = 512
Score = 292 (107.8 bits), Expect = 9.1e-30, Sum P(2) = 9.1e-30
Identities = 86/354 (24%), Positives = 150/354 (42%)
Query: 143 SRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNP 202
S + ++ +P WF W IH +E + FF S RTP +Y E R++I+ KF +
Sbjct: 7 SAEIELYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDT 66
Query: 203 ITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPF----PHVESSVANSDGDRMTXX 258
++ + + VG ++ Q+V FL+ WGLINF H+ SV N+ ++ T
Sbjct: 67 CRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSSLKKNDHL-LSVDNAKIEQGTPA 125
Query: 259 XXXXXXKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGLFPESAIAEELAKLEGPAV 318
SL I A PP+ T VP P ++ ++ + L+ P
Sbjct: 126 GIRVTATPNSL-------RPITA-PPLVEERVETGIKVP----PLTSYSDVFSDLKKPDH 173
Query: 319 EYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGK 378
C C C Y K ++C CF NG +G + ++ DF L + AA V
Sbjct: 174 VLVCAHCGERCDSPFYQHNKGI-VNICEKCFKNGNYGENNTADDFKL-IGNSAAAV---- 227
Query: 379 WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFL-DCDDDVDGNL 437
WT++ + ++W I++ V+TK++ CI +++P + + ++ ++
Sbjct: 228 WTEEEILLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLMGSASGRLNPSI 287
Query: 438 ---KETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELK 488
E T+ T+G + E E + E + + D+S +K
Sbjct: 288 LTEDENTEQVQTDGQEHEETETREEKEDRVNEDEPPAKRKRVALISEGDSSLMK 341
Score = 114 (45.2 bits), Expect = 9.1e-30, Sum P(2) = 9.1e-30
Identities = 29/128 (22%), Positives = 59/128 (46%)
Query: 833 SLPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQYID-KXXXXXXXXXXX 891
S P EI + TD + R + +E+ + K+ + +
Sbjct: 371 SCPKEIFD---TDDYSNFTVDRANGEKDTDMEEQQEEKDGPQGLPVALRIRASVATALGA 427
Query: 892 XXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLY 951
QEE ++ QLA ++IE+QL+KL++KL F ++++++ + +E ++ +
Sbjct: 428 AAAQAKILADQEEREMEQLAATVIEQQLKKLQSKLKFLDDLESIMDEEEKVIEGVKETII 487
Query: 952 QERALIIQ 959
QER ++Q
Sbjct: 488 QERVSVLQ 495
Score = 42 (19.8 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 17/79 (21%), Positives = 36/79 (45%)
Query: 552 AEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKE 611
+E + +M A + GP + TA+A+++L ++ + K F +D +
Sbjct: 333 SEGDSSLMKQVAAMASKVGPSVATAAAKAALAALCDEASC----PKEIFDTDDYSNFTVD 388
Query: 612 VAHSESIVAEMADRDIQKD 630
A+ E +M ++ +KD
Sbjct: 389 RANGEKDT-DMEEQQEEKD 406
>UNIPROTKB|F1MYU1 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006337 "nucleosome
disassembly" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0071564 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:DAAA02054442 IPI:IPI01002084
Ensembl:ENSBTAT00000044741 Uniprot:F1MYU1
Length = 952
Score = 185 (70.2 bits), Expect = 9.9e-30, Sum P(3) = 9.9e-30
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 143 SRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNP 202
+ +N ++P++ WF + IH +E +ALP FFNGK++ +TP+IY+ RN+++ + NP
Sbjct: 379 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNP 438
Query: 203 ITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFP 241
+ G + A V FL+ WGL+N+ P
Sbjct: 439 QEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDP 477
Score = 154 (59.3 bits), Expect = 9.9e-30, Sum P(3) = 9.9e-30
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 370 EAAGVSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLD 428
++ G S G+ WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+
Sbjct: 549 KSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE 608
Query: 429 CDD 431
D
Sbjct: 609 NSD 611
Score = 132 (51.5 bits), Expect = 9.9e-30, Sum P(3) = 9.9e-30
Identities = 48/197 (24%), Positives = 82/197 (41%)
Query: 765 SGKNEPDQRVLSNSVAEPSP--PSKL--TNDVDMVSDPQPLENNEPEKQIXXXXXXXXXX 820
SGK +P + S+ +A P P KL + M +D + +PEK
Sbjct: 684 SGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDT---DAQQPEKAENKGENETDEG 740
Query: 821 XXAPKDVEMVSTS---LPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQY 877
A +D E S SE++E +++ E + D ++ + + K+ +++
Sbjct: 741 DKA-QDGENEKNSEKEQDSEVSEDTKSEEKEAEENKELTDSCKERESDV-GKKKVEHEIS 798
Query: 878 IDKXXXXXXXXXXXXXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTM 937
EE +I+ L L+E Q++KLE KL F E++ +
Sbjct: 799 EGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMD 858
Query: 938 RVREQLERSRQRLYQER 954
R +E LE+ RQ+L ER
Sbjct: 859 REKEALEQQRQQLLTER 875
Score = 95 (38.5 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 38/181 (20%), Positives = 85/181 (46%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISG--NSPAMQLAAKHCF 600
P P F++ GNPVM+ AFL + P + +A+A+++L+ S ++L H
Sbjct: 616 PLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVK 675
Query: 601 ILEDPPGDKKEVAHSESIVAE-MADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK 659
+++ +V + + + +A + E LE ++ + + + + + + G+
Sbjct: 676 KVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDTDAQQPEKAENKGEN 735
Query: 660 KIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLN-ELSNPKSPKDNQPS 718
+ ++ +K NEK SEK + ++DT +++ + N EL++ S K+ +
Sbjct: 736 ETDEG---DKAQDGE-NEKNSEKEQDSE--VSEDTKSEEKEAEENKELTD--SCKERESD 787
Query: 719 I 719
+
Sbjct: 788 V 788
Score = 69 (29.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 34/142 (23%), Positives = 60/142 (42%)
Query: 602 LEDPP-GDKKEVAHSESIVAE------MADRDIQKDETLEDINVKECNSASVLDERDLSN 654
+EDPP +K H++ I+ M + D + DE + ++ ++ S +E S
Sbjct: 189 IEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKN-EEPVRSP 247
Query: 655 DHGDKKIEDSVPEEKRHAASLNEKPSE--KLNGATGPAN-----QDTPEKDEPGDLNELS 707
+ D+K + + K + P+E K +G G A+ + E+DE DL +
Sbjct: 248 ERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDM 307
Query: 708 NPKSPKDNQPSIVEESNDLPSK 729
+P N +V N P K
Sbjct: 308 EDPTPVPNIEEVVLPKNVNPKK 329
Score = 56 (24.8 bits), Expect = 7.0e-22, Sum P(3) = 7.0e-22
Identities = 22/97 (22%), Positives = 37/97 (38%)
Query: 439 ETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDT-SKPK 497
E ++ DT A + ++ + EG E + ++ EDT S+ K
Sbjct: 710 EGAEEEKMETDTDAQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEK 769
Query: 498 DESDVK--VDEQMLKSEDTSEGKVGQETGE-NIALKA 531
+ + K D + D + KV E E N+A A
Sbjct: 770 EAEENKELTDSCKERESDVGKKKVEHEISEGNVATAA 806
Score = 53 (23.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 436 NLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTS 494
N K+ +++ P G T A D + TG E + + S+ D E + E T+
Sbjct: 326 NPKKDSENTPVKGGTVADLDEQDEETVTTGGKEDE-DPGKGDQSRSVDPGEDNVTEQTN 383
Score = 52 (23.4 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 473 TSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGEN 526
T P E K E A E K+ DT + E K + + +T EG Q+ GEN
Sbjct: 701 TGPDEPEKLEGAEEEKMETDTDAQQPE---KAENK--GENETDEGDKAQD-GEN 748
Score = 52 (23.4 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 22/102 (21%), Positives = 41/102 (40%)
Query: 604 DPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIED 663
D P +K E A E + D D Q+ E E+ E + +D N+ +K +D
Sbjct: 704 DEP-EKLEGAEEEKMET---DTDAQQPEKAENKGENETDEGD--KAQDGENEKNSEKEQD 757
Query: 664 SVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNE 705
S E + + +++L + D +K +++E
Sbjct: 758 SEVSEDTKSEEKEAEENKELTDSCKERESDVGKKKVEHEISE 799
>UNIPROTKB|F1P1A8 [details] [associations]
symbol:F1P1A8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778
"WINAC complex" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 OMA:YKKYVHA GeneTree:ENSGT00390000018166
EMBL:AADN02000062 EMBL:AADN02000057 EMBL:AADN02000058
EMBL:AADN02000059 EMBL:AADN02000060 EMBL:AADN02000061
IPI:IPI00575887 Ensembl:ENSGALT00000008096 Uniprot:F1P1A8
Length = 1035
Score = 186 (70.5 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 143 SRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNP 202
+ +N ++P++ WF + IH +E +ALP FFNGK++ +TP+IY+ RN+++ + NP
Sbjct: 378 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNP 437
Query: 203 ITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFP 241
+ G + A V FL+ WGLIN+ P
Sbjct: 438 QEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLINYQVDP 476
Score = 155 (59.6 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 346 TDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHV 405
TD N G +D+ S + G +AG +WT+Q YK++WN+++EHV
Sbjct: 529 TDLQNFG-LRTDIYSKKTLAKSKGASAG---REWTEQETLLLLEALEMYKDDWNKVSEHV 584
Query: 406 ATKTKAQCILHFVQMPIEDMFLDCDD 431
++T+ +CILHF+++PIED +L+ D
Sbjct: 585 GSRTQDECILHFLRLPIEDPYLENSD 610
Score = 130 (50.8 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 47/196 (23%), Positives = 82/196 (41%)
Query: 765 SGKNEPDQRVLSNSVAEPSP--PSKLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXX 822
SGK +P + S+ +A P P K+ + + + + +PEK
Sbjct: 683 SGKVDPTYGLESSCIAGTGPDEPEKMDGAEEEKMETET-DGQQPEK---VESKAESEIEE 738
Query: 823 APKDVEMVSTSLPSEINEPQQT-DSITGTETARVEDQNRDG-QDEKHDSKETKNDQYIDK 880
K E + P + E + T D+ + A +N D +D++ ++ + K + I +
Sbjct: 739 GEKVQEGENERNPEKEQESEATADTKPEEKEAEENKENVDASKDKEMEAGKKKVEHEISE 798
Query: 881 XXXXXXXXXXXXXXXXXXX--XCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMR 938
EE +I+ L L+E Q++KLE KL F E++ + R
Sbjct: 799 GNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDR 858
Query: 939 VREQLERSRQRLYQER 954
+E LE+ RQ+L ER
Sbjct: 859 EKEALEQQRQQLLTER 874
Score = 85 (35.0 bits), Expect = 6.1e-25, Sum P(3) = 6.1e-25
Identities = 36/177 (20%), Positives = 79/177 (44%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISG--NSPAMQLAAKHCF 600
P P F++ GNPVM+ AFL + P + +A+A+++L+ S ++L H
Sbjct: 615 PLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVK 674
Query: 601 ILEDPPGDKKEVAHSESIVAE-MADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK 659
+++ +V + + + +A + E ++ ++ + + D + + +
Sbjct: 675 KVQEAARASGKVDPTYGLESSCIAGTGPDEPEKMDGAEEEKMETET--DGQQ--PEKVES 730
Query: 660 KIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQ 716
K E + E ++ NE+ EK + A DT +++ + N+ N + KD +
Sbjct: 731 KAESEIEEGEKVQEGENERNPEKEQESEATA--DTKPEEKEAEENK-ENVDASKDKE 784
Score = 75 (31.5 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 36/143 (25%), Positives = 63/143 (44%)
Query: 602 LEDPP-GDKKEVAHSESIVAE------MADRDIQKDETLEDINVKECNSASVLDERDL-S 653
+EDPP +K H++ I+ M + D + DE + ++ ++ S+ +E + S
Sbjct: 189 IEDPPIPEKPWKVHAKWILDTDIFNEWMNEEDYEVDENRKSVSFRQ--RISMKNEEPVRS 246
Query: 654 NDHGDKKIEDSVPEEKRHAASLNEKP--SEKLNGATGPAN-----QDTPEKDEPGDLNEL 706
+ D+K S +++H+ S P S K +G G A + E+DE DL +
Sbjct: 247 PERRDRKAAAST-RKRKHSPSPPPTPVESRKKSGKKGQATIYGKRRGQKEEDEQEDLTKD 305
Query: 707 SNPKSPKDNQPSIVEESNDLPSK 729
+P N +V N P K
Sbjct: 306 MEDPTPVPNIEEVVLPKNVNPKK 328
Score = 67 (28.6 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 37/128 (28%), Positives = 58/128 (45%)
Query: 439 ETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKD 498
E++ A T D D AE + +T +GQ Q +E SK E SE++ E + ++
Sbjct: 693 ESSCIAGTGPDEPEKMDGAEEEKMET-ETDGQ-QPEKVE-SKAE--SEIEEGEKVQEGEN 747
Query: 499 ESDVKVDEQMLKSEDTS-EGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEVGNP 557
E + + +++ + DT E K +E EN+ +E EA HE + GN
Sbjct: 748 ERNPEKEQESEATADTKPEEKEAEENKENVDASKDKE-MEAGKKKVEHEISE-----GNV 801
Query: 558 VMALAAFL 565
A AA L
Sbjct: 802 ATAAAAAL 809
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 436 NLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTS 494
N K+ +++ P G T A D + TG E + + S+ D E + E T+
Sbjct: 325 NPKKDSENTPVKGGTVADLDEQDEETVATGGKEDEDPNKG-DQSRSIDPGEDNVTEQTN 382
Score = 47 (21.6 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 607 GDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVP 666
G+K + +E + + + D E+ +E N +V +D + G KK+E +
Sbjct: 739 GEKVQEGENERNPEKEQESEATADTKPEEKEAEE-NKENVDASKDKEMEAGKKKVEHEIS 797
Query: 667 E 667
E
Sbjct: 798 E 798
>UNIPROTKB|E2REF0 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0008286
GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 CTD:6599 KO:K11649 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:AAEX03012237 EMBL:AAEX03012238
RefSeq:XP_533845.2 ProteinModelPortal:E2REF0
Ensembl:ENSCAFT00000020868 GeneID:476640 KEGG:cfa:476640
NextBio:20852260 Uniprot:E2REF0
Length = 1107
Score = 185 (70.2 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 143 SRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNP 202
+ +N ++P++ WF + IH +E +ALP FFNGK++ +TP+IY+ RN+++ + NP
Sbjct: 443 TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNP 502
Query: 203 ITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFP 241
+ G + A V FL+ WGL+N+ P
Sbjct: 503 QEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDP 541
Score = 154 (59.3 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 370 EAAGVSGGK-WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLD 428
++ G S G+ WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+
Sbjct: 613 KSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLE 672
Query: 429 CDD 431
D
Sbjct: 673 NSD 675
Score = 133 (51.9 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 53/202 (26%), Positives = 81/202 (40%)
Query: 765 SGKNEPDQRVLSNSVAEPSP--PSKL--TNDVDMVSD-----PQPLEN---NEPEKQIXX 812
SGK +P + S+ +A P P KL + M +D P+ EN NE ++
Sbjct: 748 SGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADTDGQHPEKAENKGENETDEGDKA 807
Query: 813 XXXXXXXXXXAPKDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKET 872
+D E VS SE E ++ +T T R D + + +H+ E
Sbjct: 808 QDGENEKNSEKEQDSE-VSEDTKSEEKETEENKELTDTCKERESDLGK--KKVEHEISE- 863
Query: 873 KNDQYIDKXXXXXXXXXXXXXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEM 932
EE +I+ L L+E Q++KLE KL F E+
Sbjct: 864 ------GNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL 917
Query: 933 DNVTMRVREQLERSRQRLYQER 954
+ + R +E LE+ RQ+L ER
Sbjct: 918 ETIMDREKEALEQQRQQLLTER 939
Score = 91 (37.1 bits), Expect = 3.1e-25, Sum P(3) = 3.1e-25
Identities = 41/173 (23%), Positives = 77/173 (44%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISG--NSPAMQLAAKHCF 600
P P F++ GNPVM+ AFL + P + +A+A+++L+ S ++L H
Sbjct: 680 PLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVK 739
Query: 601 ILEDPPGDKKEVAHSESIVAE-MADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK 659
+++ +V + + + +A + E LE ++ E D H +K
Sbjct: 740 KVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKM-------EADTDGQHPEK 792
Query: 660 ---KIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLN-ELSN 708
K E+ E + NEK SEK + ++DT +++ + N EL++
Sbjct: 793 AENKGENETDEGDKAQDGENEKNSEKEQDSE--VSEDTKSEEKETEENKELTD 843
Score = 69 (29.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 34/142 (23%), Positives = 60/142 (42%)
Query: 602 LEDPP-GDKKEVAHSESIVAE------MADRDIQKDETLEDINVKECNSASVLDERDLSN 654
+EDPP +K H++ I+ M + D + DE + ++ ++ S +E S
Sbjct: 253 IEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKN-EEPVRSP 311
Query: 655 DHGDKKIEDSVPEEKRHAASLNEKPSE--KLNGATGPAN-----QDTPEKDEPGDLNELS 707
+ D+K + + K + P+E K +G G A+ + E+DE DL +
Sbjct: 312 ERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDM 371
Query: 708 NPKSPKDNQPSIVEESNDLPSK 729
+P N +V N P K
Sbjct: 372 EDPTPVPNIEEVVLPKNVNPKK 393
Score = 58 (25.5 bits), Expect = 7.8e-22, Sum P(3) = 7.8e-22
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 603 EDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSAS-VLDERDLSNDHGDKKI 661
E GDK + +E + D ++ +D E+ +E + ER+ +D G KK+
Sbjct: 800 ETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERE--SDLGKKKV 857
Query: 662 EDSVPE 667
E + E
Sbjct: 858 EHEISE 863
Score = 54 (24.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 436 NLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTS 494
N K+ +++ P G T A D + TG E S + S+ D E + E T+
Sbjct: 390 NPKKDSENTPVKGGTVADLDEQDEETVTTGGKEDD-DPSKGDQSRSLDPGEDNVTEQTN 447
Score = 52 (23.4 bits), Expect = 3.2e-21, Sum P(3) = 3.2e-21
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 428 DCDDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTG--AVEGQTQTSPMETSKPEDAS 485
D + ++G +E +A T+G + +E+ G A +G+ + + S+ E S
Sbjct: 768 DEPEKLEG-AEEEKMEADTDGQHPEKAENKGENETDEGDKAQDGENE----KNSEKEQDS 822
Query: 486 ELKICEDT-SKPKDESDVK--VDEQMLKSEDTSEGKVGQETGE-NIALKA 531
E + EDT S+ K+ + K D + D + KV E E N+A A
Sbjct: 823 E--VSEDTKSEEKETEENKELTDTCKERESDLGKKKVEHEISEGNVATAA 870
Score = 49 (22.3 bits), Expect = 6.6e-21, Sum P(3) = 6.6e-21
Identities = 19/54 (35%), Positives = 24/54 (44%)
Query: 473 TSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGEN 526
T P E K E A E K+ DT E K + + +T EG Q+ GEN
Sbjct: 765 TGPDEPEKLEGAEEEKMEADTDGQHPE---KAENK--GENETDEGDKAQD-GEN 812
Score = 44 (20.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 427 LDCDDDVDGNLKETTDDAPTNGDTSASKDVAE 458
LD D+ DD P+ GD S S D E
Sbjct: 408 LDEQDEETVTTGGKEDDDPSKGDQSRSLDPGE 439
>DICTYBASE|DDB_G0277033 [details] [associations]
symbol:swi3 "SWIRM domain-containing protein Swi3"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 InterPro:IPR001357 dictyBase:DDB_G0277033
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000019 SUPFAM:SSF52113 eggNOG:COG5259
KO:K11649 RefSeq:XP_642866.1 ProteinModelPortal:Q550R6 SMR:Q550R6
PRIDE:Q550R6 EnsemblProtists:DDB0219999 GeneID:8620732
KEGG:ddi:DDB_G0277033 InParanoid:Q550R6 OMA:QTTIDMP
ProtClustDB:CLSZ2430855 Uniprot:Q550R6
Length = 1223
Score = 187 (70.9 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 146 SNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQ 205
S+ + P+ C WF +IH +E+ LP FF GKS +TP++Y E R++++ + NP
Sbjct: 638 SSFTIPPSQCTWFKMERIHEVEKNQLPEFFTGKSPSKTPEVYKEYRDFMINTYLQNPYQY 697
Query: 206 IELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFP 241
+ L + VG + + V FL++WGLIN+ P
Sbjct: 698 LTLTAIRRNLVGDVCSILRVHSFLEHWGLINYFVNP 733
Score = 158 (60.7 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 344 LCTDCFNNGKFGSDMSS--SDFILMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEI 401
LC +CF N + D S D + +WTDQ Y ++WN++
Sbjct: 883 LCNNCFTNDQTFIDHSHLIKDQFKKIELPEPSPLEDQWTDQETLLLLEALDIYSDSWNDV 942
Query: 402 AEHVATKTKAQCILHFVQMPIEDMFLDCDDDVDGNLKETTDDAPTNGDTS 451
A+HV TK+K QC+L F+++PIE+ +L+ + +L+ + ++ NG +S
Sbjct: 943 ADHVKTKSKEQCLLQFLKLPIEEPYLEDNITKSISLQPPSSNSILNGSSS 992
Score = 126 (49.4 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 40/154 (25%), Positives = 67/154 (43%)
Query: 827 VEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQYIDKXXXXXX 886
+ +STS+ SE+ + T + +N D +D+ + ND ++ K
Sbjct: 1013 ISFLSTSVSSEV-----ASAAAKAATDVLNKENGDSMITDNDNDD--ND-HLSKVNIQAA 1064
Query: 887 XXXXXXXXXXXXXXCQ--EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLE 944
EE +I+ L +I Q +KLE KL ++EM+N + + QLE
Sbjct: 1065 ASATLAATSIKAKALSKSEEREIQSLILKIINVQTKKLELKLKCYSEMENALEKEKNQLE 1124
Query: 945 RSRQRLYQERALIIQARLGPSRVMQ-PSVPANRN 977
+ RQ L+ ER +++A Q PS N+N
Sbjct: 1125 KERQALFSERFSLLKASQNNQLQQQIPSYLVNQN 1158
Score = 45 (20.9 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 322 CNSCSADCSRKRY 334
C+ CS DC+ RY
Sbjct: 842 CSKCSQDCTFLRY 854
Score = 45 (20.9 bits), Expect = 5.8e-21, Sum P(4) = 5.8e-21
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 640 ECNSASVLDERDLSN-DHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKD 698
E SA+ D+ N ++GD I D+ ++ H + +N + + A K
Sbjct: 1023 EVASAAAKAATDVLNKENGDSMITDNDNDDNDHLSKVNIQAAASATLAATSIKAKALSKS 1082
Query: 699 EPGDLNEL 706
E ++ L
Sbjct: 1083 EEREIQSL 1090
Score = 42 (19.8 bits), Expect = 3.6e-20, Sum P(5) = 3.6e-20
Identities = 6/28 (21%), Positives = 20/28 (71%)
Query: 554 VGNPVMALAAFLTLLGGPDLTTASARSS 581
+ NP++++ +FL+ ++ +A+A+++
Sbjct: 1005 LNNPIVSMISFLSTSVSSEVASAAAKAA 1032
Score = 41 (19.5 bits), Expect = 6.4e-17, Sum P(4) = 6.4e-17
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 754 KDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPSKL 788
+D + L S DQ V V +P PP +
Sbjct: 847 QDCTFLRYSFTPAPPPQDQAVSGEQVIQPQPPQTI 881
Score = 41 (19.5 bits), Expect = 6.4e-17, Sum P(4) = 6.4e-17
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 438 KETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMET--SKPEDAS 485
+ETT + T T+ +K+ + + T + + +S SKP S
Sbjct: 777 RETTTTSTTTTTTTTTKEKITSPKQSTSSSSSSSSSSSSTNNISKPFSTS 826
Score = 39 (18.8 bits), Expect = 2.4e-20, Sum P(4) = 2.4e-20
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 615 SESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAAS 674
S S+ +E+A K T D+ KE + + D + NDH K + A S
Sbjct: 1017 STSVSSEVASA-AAKAAT--DVLNKENGDSMITDNDNDDNDHLSKVNIQAAASATLAATS 1073
Query: 675 LNEKPSEK 682
+ K K
Sbjct: 1074 IKAKALSK 1081
Score = 37 (18.1 bits), Expect = 3.6e-20, Sum P(5) = 3.6e-20
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 611 EVAHSESIVAEMADRDIQKDETLEDINVKECNSASV 646
+V + E+ + + D D ++ L +N++ SA++
Sbjct: 1034 DVLNKENGDSMITDNDNDDNDHLSKVNIQAAASATL 1069
>SGD|S000001933 [details] [associations]
symbol:RSC8 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP;IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 SGD:S000001933 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0000082 GO:GO:0008270 EMBL:D50617 EMBL:BK006940
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0006368 GO:GO:0006337 GO:GO:0016586
GO:GO:0043044 GO:GO:0006303 eggNOG:COG5259 EMBL:AY692841 PIR:S56292
RefSeq:NP_116695.3 RefSeq:NP_116697.3 ProteinModelPortal:P43609
SMR:P43609 DIP:DIP-1478N IntAct:P43609 MINT:MINT-401637
STRING:P43609 PaxDb:P43609 PeptideAtlas:P43609 EnsemblFungi:YFR037C
GeneID:850598 GeneID:850600 KEGG:sce:YFR037C KEGG:sce:YFR039C
CYGD:YFR037c HOGENOM:HOG000246692 KO:K11762 OMA:PYEYLTI
OrthoDB:EOG4PZNGG NextBio:966460 Genevestigator:P43609
GermOnline:YFR037C Uniprot:P43609
Length = 557
Score = 342 (125.4 bits), Expect = 5.2e-28, P = 5.2e-28
Identities = 110/422 (26%), Positives = 193/422 (45%)
Query: 106 EAARDDS-TFEAIEELNKASEEWAALEAKIEADFEAIRSRDSNVH--VVPTHCGWFSWTK 162
E A+++S T A K + E A K+E +A+R H ++P+ WF +K
Sbjct: 38 EQAKEESATLGAEVAHKKINYEQEA--QKLEE--KALRFLAKQTHPVIIPSFASWFDISK 93
Query: 163 IHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDAR 222
IH +E+++ P FFN S+ +TP Y + RN+I+ + +P + + + + +
Sbjct: 94 IHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITAVRRNVAMDVASI 153
Query: 223 QEVMEFLDYWGLINFHPFPHVESS-VANSDGDRMTXXXXXXXXKKGSLLEKLYRFEEIKA 281
++ FL+ WGLIN+ P + S + S K L E + + +E++
Sbjct: 154 VKIHAFLEKWGLINYQIDPRTKPSLIGPSFTGHFQVVLDTPQGLKPFLPENVIK-QEVEG 212
Query: 282 GPPVAPMPSITFPA---VPSGLFPES----AIAEELAKLEGPAVEYHCNSCSADCSRKRY 334
G P FP + ++ + A+ +E Y C++C + RY
Sbjct: 213 GDGAEPQVKKEFPVNLTIKKNVYDSAQDFNALQDESRNSRQIHKVYICHTCGNESINVRY 272
Query: 335 HCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGK-WTDQXXXXXXXXXXX 393
H + D +LC+ CF G FG++ SSDFI + E G S K W+DQ
Sbjct: 273 HNLRARDTNLCSRCFQEGHFGANFQSSDFIRL---ENNGNSVKKNWSDQEMLLLLEGIEM 329
Query: 394 YKENWNEIAEHVATKTKAQ-CILHFVQMPIEDMFLDCDDDVDGNLKETTDDAPTNGDTSA 452
Y++ W +IA+HV + + CI F+ +PIED ++ + V L D+ +G S
Sbjct: 330 YEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYIR--EVVGSTLNGKGGDS-RDGSVSG 386
Query: 453 SKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSE 512
SK + +++ ++G + + + K + SE K E++ E VK+ + L+S+
Sbjct: 387 SKLMECVNDAVQTLLQGDDKLGKV-SDKSREISE-KYIEESQAIIQEL-VKLTMEKLESK 443
Query: 513 DT 514
T
Sbjct: 444 FT 445
>FB|FBgn0002783 [details] [associations]
symbol:mor "moira" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=NAS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS;IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0035060
"brahma complex" evidence=IDA;NAS;TAS] [GO:0003713 "transcription
coactivator activity" evidence=IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=IMP] [GO:0008586 "imaginal
disc-derived wing vein morphogenesis" evidence=IMP] [GO:0007474
"imaginal disc-derived wing vein specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357 EMBL:AE014297
GO:GO:0045893 GO:GO:0022008 GO:GO:0003677 GO:GO:0008586
GO:GO:0007474 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0007480 SUPFAM:SSF52113 GO:GO:0045749
GO:GO:0043044 GO:GO:0008587 GO:GO:0035060 KO:K11649
GeneTree:ENSGT00390000018166 OMA:QYIQAEP FlyBase:FBgn0002783
EMBL:AF071502 EMBL:BT031130 PIR:T13153 RefSeq:NP_524373.1
UniGene:Dm.2417 SMR:Q9VF03 DIP:DIP-38882N IntAct:Q9VF03
MINT:MINT-6541278 STRING:Q9VF03 EnsemblMetazoa:FBtr0083238
GeneID:41942 KEGG:dme:Dmel_CG18740 UCSC:CG18740-RA CTD:41942
InParanoid:Q9VF03 GenomeRNAi:41942 NextBio:826387 Uniprot:Q9VF03
Length = 1209
Score = 186 (70.5 bits), Expect = 1.7e-27, Sum P(4) = 1.7e-27
Identities = 38/117 (32%), Positives = 66/117 (56%)
Query: 121 NKASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQ 180
N ++E+++ AK D E + ++ +VP++ WF + IH +E++A+P FFN K++
Sbjct: 425 NSNTQEFSS-SAK--EDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNK 481
Query: 181 DRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINF 237
+TP+IYM RN+++ + NP + G + A V FL+ WGLIN+
Sbjct: 482 SKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 538
Score = 143 (55.4 bits), Expect = 1.7e-27, Sum P(4) = 1.7e-27
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 378 KWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDDDVDGNL 437
+WTDQ +K++WN++ EHV ++T+ +CILHF+++PIED +L+ D G L
Sbjct: 654 EWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDGGFLGPL 713
Score = 107 (42.7 bits), Expect = 1.7e-27, Sum P(4) = 1.7e-27
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
EE +I+ L L+E Q++KLE KL F E++ R RE LE RQ+L ER
Sbjct: 968 EERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITER 1019
Score = 106 (42.4 bits), Expect = 6.6e-22, Sum P(3) = 6.6e-22
Identities = 58/218 (26%), Positives = 89/218 (40%)
Query: 519 VGQETGENIALKALREAFEAV------GYV-PTHETPQSFAEVGNPVMALAAFLTLLGGP 571
VG T + L LR E G++ P P F++ GNP+M+ AFL + P
Sbjct: 681 VGSRTQDECILHFLRLPIEDPYLEDDGGFLGPLACQPIPFSKSGNPIMSTVAFLASVVDP 740
Query: 572 DLTTASARSSLK---SISGNSPAMQLAAKHCFILEDPPGDKKEVAHSESIVAEMADRDIQ 628
+ A+A+++++ +I PA + H +E K + + +A
Sbjct: 741 RVAAAAAKAAMEEFAAIKDEVPAT-IMDNHLKNVEKASAGGKFNPNFGLANSGIAGTGND 799
Query: 629 KDETLEDINVKECNSASVLDE--RDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGA 686
KD+ E SA DE +DLS D K +D+ +K + N S + A
Sbjct: 800 KDDE-EGKEGGASASAGGSDEEMKDLSKKDDDAKSKDNTKSDKTNT---NTDSSSTSSSA 855
Query: 687 TGPANQ-DTPEKDEPGDL--NELSNPKSPKDNQPSIVE 721
TG N D K+ G + S KS K N+ S E
Sbjct: 856 TGNTNNTDKKPKESSGSSPSGDKSAIKSDKSNKSSPTE 893
Score = 63 (27.2 bits), Expect = 1.7e-27, Sum P(4) = 1.7e-27
Identities = 31/102 (30%), Positives = 41/102 (40%)
Query: 432 DVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETS--KPE-DASELK 488
D D K+ T TN +T +S S S TG T P E+S P D S +K
Sbjct: 828 DDDAKSKDNTKSDKTNTNTDSSS----TSSSATGNTNN-TDKKPKESSGSSPSGDKSAIK 882
Query: 489 ICEDTSKPKDESDVKVD--EQMLKSEDTS---EGKVGQETGE 525
+ E+ E +K+ED+S E K G E E
Sbjct: 883 SDKSNKSSPTETAAAASGGEVDIKTEDSSGDGETKDGTEAKE 924
Score = 62 (26.9 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 14/61 (22%), Positives = 23/61 (37%)
Query: 433 VDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICED 492
+ G DD T G + + + S+TG + T +S ED + + E
Sbjct: 388 IKGGTMTDLDDEMTGGSAAQAMSTGDGENSQTGKTSDNSNTQEFSSSAKEDMED-NVTEQ 446
Query: 493 T 493
T
Sbjct: 447 T 447
Score = 60 (26.2 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 65/327 (19%), Positives = 109/327 (33%)
Query: 435 GNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTS 494
G E D D + SKD ++ ++ T T +S + D K +S
Sbjct: 815 GGSDEEMKDLSKKDDDAKSKDNTKSDKTNTNTDSSSTSSSATGNTNNTDKKP-KESSGSS 873
Query: 495 KPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEV 554
D+S +K D+ KS T +G + +K E ++ G T + ++
Sbjct: 874 PSGDKSAIKSDKSN-KSSPTETAAAA--SGGEVDIKT--E--DSSGDGETKDGTEAKEGT 926
Query: 555 GNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEVA- 613
G LA P T S + + + + + AKH LE+ K VA
Sbjct: 927 GTGTGPLAV-------PKEGTFSENNMQTAAAAALASAAVKAKHLAALEERK-IKSLVAL 978
Query: 614 --HSESIVAEMADRDIQKDE-TLE-DINVKECNSASVLDERDLSNDHGDKKIEDSVPEEK 669
++ E+ R ++ E T+E + E ++ ER + K E ++
Sbjct: 979 LVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQA 1038
Query: 670 RHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSK 729
H + P Q P+ +P + P Q + + LP +
Sbjct: 1039 HHRLQQELQGQAAAGSMILPQQQQLPQAQQPQQQQQTLPPHPHLAQQQQLPPHPHQLPPQ 1098
Query: 730 VLQSSQKXXXXXXXXXPAPPVDVEKDN 756
SQ P PP V N
Sbjct: 1099 ----SQPLAGPTAQHQPLPPHVVSSPN 1121
Score = 50 (22.7 bits), Expect = 3.6e-26, Sum P(4) = 3.6e-26
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 450 TSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQML 509
T KD E E A G + + SK +D ++ K D +K D+++ D
Sbjct: 796 TGNDKDDEEGKEGGASASAGGSDEEMKDLSKKDDDAKSK---DNTK-SDKTNTNTDSSST 851
Query: 510 KSEDT 514
S T
Sbjct: 852 SSSAT 856
Score = 44 (20.5 bits), Expect = 1.5e-25, Sum P(4) = 1.5e-25
Identities = 34/143 (23%), Positives = 49/143 (34%)
Query: 661 IEDSVPEE--KRHAASLNEKPSE--KLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQ 716
I+D VP H ++ EK S K N G AN D +E +
Sbjct: 757 IKDEVPATIMDNHLKNV-EKASAGGKFNPNFGLANSGIAGTGNDKD-DEEGKEGGASASA 814
Query: 717 PSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLS 776
EE DL K + K + + D+S S S N D++
Sbjct: 815 GGSDEEMKDLSKKDDDAKSKDNTK------SDKTNTNTDSSSTSSSATGNTNNTDKKPKE 868
Query: 777 NSVAEPS-PPSKLTNDVDMVSDP 798
+S + PS S + +D S P
Sbjct: 869 SSGSSPSGDKSAIKSDKSNKSSP 891
Score = 38 (18.4 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 402 AEHVATKTKAQCILHFVQ 419
+E + ++ AQ ++HF+Q
Sbjct: 45 SEPITKESLAQLLIHFLQ 62
Score = 37 (18.1 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 116 AIEELNKASEEWAALEAKIEAD 137
AI ++ E+W + +I+AD
Sbjct: 522 AIMRVHAFLEQWGLINYQIDAD 543
>UNIPROTKB|G5EF87 [details] [associations]
symbol:swsn-1 "SWI3-like protein" species:6239
"Caenorhabditis elegans" [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003677 GO:GO:0040018
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 GeneTree:ENSGT00390000018166 EMBL:AF230279
PIR:T26449 RefSeq:NP_001256906.1 UniGene:Cel.7072 SMR:G5EF87
IntAct:G5EF87 EnsemblMetazoa:Y113G7B.23 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 WormBase:Y113G7B.23a
OMA:HFDELEQ NextBio:908892 Uniprot:G5EF87
Length = 789
Score = 193 (73.0 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 37/113 (32%), Positives = 65/113 (57%)
Query: 131 EAKIEADFEAIRSRDSNV----H--VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTP 184
E +++ EA + + NV H VVP++ GWF + IH +E++A+P FFNGK++ +TP
Sbjct: 59 EEGVQSTKEAPQLAEGNVIEQTHYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTP 118
Query: 185 DIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINF 237
D+Y+ RN+++ + NP + G + + + FL+ WGL+N+
Sbjct: 119 DVYVAYRNFMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNY 171
Score = 134 (52.2 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 45/170 (26%), Positives = 74/170 (43%)
Query: 376 GGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDDDVDG 435
G WT+Q +K++WN++ +HV T+T+ +C+L F+Q+PI+D +L +++
Sbjct: 254 GRDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLT--ENLSS 311
Query: 436 NLKETTDDAPTNGDTSASKDVA--EASESKTGAVEGQTQTSPMETSKPE-DASELKIC-E 491
+ E AP +A S++G T P+ A+ K E
Sbjct: 312 DKAEA---APGGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAME 368
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGE-NIALKALREAFEAVG 540
+ K K+E V E K+ K GQ G + L+ A EA G
Sbjct: 369 EFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAG 418
Score = 115 (45.5 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 31/105 (29%), Positives = 44/105 (41%)
Query: 851 ETARVEDQNRDGQDEKHDSKETKNDQYIDKXXXXXXXXXXXXXXXXXXXXCQ-EEDQIRQ 909
E A D+ D T+ IDK Q EE +I+
Sbjct: 415 EAAGDSDEKMDTNTNDDVPSTTEAKSAIDKGVQAAAASCLAAAAVKAKHLAQIEERRIKS 474
Query: 910 LATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
L L+E Q++KLE KL F+E++ + + RE LE R +L ER
Sbjct: 475 LVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILER 519
Score = 70 (29.7 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 535 AFEAVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLK 583
A E +G P P F++ GNPVM+ AFL + P + A+ +++++
Sbjct: 322 AKEVLG--PLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAME 368
Score = 48 (22.0 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 431 DDVDGNLKETTDDAPTNGDTSASKDVAEASE--SKTGAVEGQTQT 473
DD DG++ T DD + + +V + E ++ A +GQ T
Sbjct: 11 DDDDGDVSMTGDDDDSRSGAAVKVEVPKGKEKDAEFSAPKGQKLT 55
Score = 45 (20.9 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 19/76 (25%), Positives = 32/76 (42%)
Query: 438 KETTDDAPTNGDTSASKDVAEASESKTGAVEG-QTQTSPMETSKPEDASELKICEDTSKP 496
+E D+ DT+ + DV +E+K+ +G Q + + A L E+ +
Sbjct: 414 EEAAGDSDEKMDTNTNDDVPSTTEAKSAIDKGVQAAAASCLAAAAVKAKHLAQIEER-RI 472
Query: 497 KDESDVKVDEQMLKSE 512
K V+ QM K E
Sbjct: 473 KSLVAQLVETQMKKLE 488
>WB|WBGene00004203 [details] [associations]
symbol:swsn-1 species:6239 "Caenorhabditis elegans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IGI;IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0046662 "regulation of oviposition" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003677
GO:GO:0040018 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 UniGene:Cel.7072 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 RefSeq:NP_001256907.1
ProteinModelPortal:H8ESF3 SMR:H8ESF3 WormBase:Y113G7B.23c
Uniprot:H8ESF3
Length = 792
Score = 193 (73.0 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 37/113 (32%), Positives = 65/113 (57%)
Query: 131 EAKIEADFEAIRSRDSNV----H--VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTP 184
E +++ EA + + NV H VVP++ GWF + IH +E++A+P FFNGK++ +TP
Sbjct: 59 EEGVQSTKEAPQLAEGNVIEQTHYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTP 118
Query: 185 DIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINF 237
D+Y+ RN+++ + NP + G + + + FL+ WGL+N+
Sbjct: 119 DVYVAYRNFMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNY 171
Score = 134 (52.2 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 45/170 (26%), Positives = 74/170 (43%)
Query: 376 GGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDDDVDG 435
G WT+Q +K++WN++ +HV T+T+ +C+L F+Q+PI+D +L +++
Sbjct: 254 GRDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLT--ENLSS 311
Query: 436 NLKETTDDAPTNGDTSASKDVA--EASESKTGAVEGQTQTSPMETSKPE-DASELKIC-E 491
+ E AP +A S++G T P+ A+ K E
Sbjct: 312 DKAEA---APGGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAME 368
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGE-NIALKALREAFEAVG 540
+ K K+E V E K+ K GQ G + L+ A EA G
Sbjct: 369 EFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAG 418
Score = 115 (45.5 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 31/105 (29%), Positives = 44/105 (41%)
Query: 851 ETARVEDQNRDGQDEKHDSKETKNDQYIDKXXXXXXXXXXXXXXXXXXXXCQ-EEDQIRQ 909
E A D+ D T+ IDK Q EE +I+
Sbjct: 415 EAAGDSDEKMDTNTNDDVPSTTEAKSAIDKGVQAAAASCLAAAAVKAKHLAQIEERRIKS 474
Query: 910 LATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
L L+E Q++KLE KL F+E++ + + RE LE R +L ER
Sbjct: 475 LVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILER 519
Score = 70 (29.7 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 535 AFEAVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLK 583
A E +G P P F++ GNPVM+ AFL + P + A+ +++++
Sbjct: 322 AKEVLG--PLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAME 368
Score = 48 (22.0 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 431 DDVDGNLKETTDDAPTNGDTSASKDVAEASE--SKTGAVEGQTQT 473
DD DG++ T DD + + +V + E ++ A +GQ T
Sbjct: 11 DDDDGDVSMTGDDDDSRSGAAVKVEVPKGKEKDAEFSAPKGQKLT 55
Score = 45 (20.9 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 19/76 (25%), Positives = 32/76 (42%)
Query: 438 KETTDDAPTNGDTSASKDVAEASESKTGAVEG-QTQTSPMETSKPEDASELKICEDTSKP 496
+E D+ DT+ + DV +E+K+ +G Q + + A L E+ +
Sbjct: 414 EEAAGDSDEKMDTNTNDDVPSTTEAKSAIDKGVQAAAASCLAAAAVKAKHLAQIEER-RI 472
Query: 497 KDESDVKVDEQMLKSE 512
K V+ QM K E
Sbjct: 473 KSLVAQLVETQMKKLE 488
>UNIPROTKB|Q8TAQ2 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0017053
"transcriptional repressor complex" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=NAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0045892 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0003713 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 UniGene:Hs.632717 EMBL:AC073896 HOGENOM:HOG000047736
HOVERGEN:HBG054849 KO:K11649 EMBL:U66616 EMBL:BT009924
EMBL:AB209006 EMBL:BC009067 EMBL:BC013045 EMBL:BC026222
IPI:IPI00150057 IPI:IPI00216047 IPI:IPI00793163
RefSeq:NP_001123892.1 RefSeq:NP_003066.2 RefSeq:NP_620706.1
UniGene:Hs.236030 ProteinModelPortal:Q8TAQ2 SMR:Q8TAQ2
DIP:DIP-27611N IntAct:Q8TAQ2 MINT:MINT-1151033 STRING:Q8TAQ2
PhosphoSite:Q8TAQ2 DMDM:57012959 PaxDb:Q8TAQ2 PeptideAtlas:Q8TAQ2
PRIDE:Q8TAQ2 DNASU:6601 Ensembl:ENST00000267064
Ensembl:ENST00000347471 Ensembl:ENST00000394023 GeneID:6601
KEGG:hsa:6601 UCSC:uc001ska.3 UCSC:uc001skb.3 CTD:6601
GeneCards:GC12M056555 HGNC:HGNC:11105 HPA:CAB004321 HPA:HPA021213
MIM:601734 neXtProt:NX_Q8TAQ2 PharmGKB:PA35955 InParanoid:Q8TAQ2
PhylomeDB:Q8TAQ2 ChiTaRS:SMARCC2 GenomeRNAi:6601 NextBio:25677
ArrayExpress:Q8TAQ2 Bgee:Q8TAQ2 CleanEx:HS_SMARCC2
Genevestigator:Q8TAQ2 GermOnline:ENSG00000139613 Uniprot:Q8TAQ2
Length = 1214
Score = 185 (70.2 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 150 VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELK 209
++P++ WF + +H +E +ALP FFNGK++ +TP+IY+ RN+++ + NP +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 210 DLSELEVGSLDARQEVMEFLDYWGLINF 237
G + A V FL+ WGLIN+
Sbjct: 485 ACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 147 (56.8 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 346 TDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHV 405
TD N G +DM + + +AA + +WT+Q YK++WN+++EHV
Sbjct: 570 TDMQNFG-LRTDMYTKKNVPS-KSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHV 627
Query: 406 ATKTKAQCILHFVQMPIEDMFLD 428
++T+ +CILHF+++PIED +L+
Sbjct: 628 GSRTQDECILHFLRLPIEDPYLE 650
Score = 117 (46.2 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 51/208 (24%), Positives = 83/208 (39%)
Query: 765 SGKNEPDQRVLSNSVA-----EPSPPSKLTNDVDMVSDPQPLENNEPEKQIXXXXX---- 815
+GK +P + S+ +A EP + ND V E EP++
Sbjct: 726 TGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEE 785
Query: 816 XXXXXXXAPKDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDE-------KHD 868
APK E SE E +++D + + E + ++GQ+E
Sbjct: 786 AKEKTSEAPKKDEEKGKEGDSE-KESEKSDGDPIVDPEK-EKEPKEGQEEVLKEVVESEG 843
Query: 869 SKETKNDQYIDKXXXXXXXXXXXXXXXXXXX--XCQEEDQIRQLATSLIEKQLQKLEAKL 926
++TK ++ I + EE +I+ L L+E Q++KLE KL
Sbjct: 844 ERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKL 903
Query: 927 AFFNEMDNVTMRVREQLERSRQRLYQER 954
F E++ + R RE LE RQ+L +R
Sbjct: 904 RHFEELETIMDREREALEYQRQQLLADR 931
Score = 107 (42.7 bits), Expect = 5.1e-26, Sum P(3) = 5.1e-26
Identities = 47/188 (25%), Positives = 82/188 (43%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQ--LAAKHCF 600
P P F++ GNPVM+ AFL + P + +A+A+S+L+ S + L H
Sbjct: 658 PLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVR 717
Query: 601 ILEDPPG--DKKEVAHS-ESIVAEMADRDIQKDETLEDINVKECN-SASVLDERDLSND- 655
+E+ K + A ES + +A + E +E+ E DE+ +
Sbjct: 718 KVEEAAKVTGKADPAFGLES--SGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEP 775
Query: 656 -HGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKD 714
G IE+ E+ A +K EK G G + +++ EK + + + K PK+
Sbjct: 776 REGGGAIEEEAKEKTSEAP---KKDEEK--GKEGDSEKES-EKSDGDPIVDPEKEKEPKE 829
Query: 715 NQPSIVEE 722
Q +++E
Sbjct: 830 GQEEVLKE 837
Score = 68 (29.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 28/122 (22%), Positives = 55/122 (45%)
Query: 435 GNLKETTDDAPTNGDT-SASKDVAEASESKTGAVEGQTQTSPME--TSKPEDASELKICE 491
G+ +E +D + D S +V E + KT + ++++P++ T D E + E
Sbjct: 330 GHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESME 389
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFE--AVGYVPTHETPQ 549
T K +DE+ + K+ D E V ++T +I + + F+ +V + P+
Sbjct: 390 TTGKDEDENSTGNKGEQTKNPDLHEDNVTEQT-HHIIIPSYAAWFDYNSVHAIERRALPE 448
Query: 550 SF 551
F
Sbjct: 449 FF 450
Score = 67 (28.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 49/210 (23%), Positives = 86/210 (40%)
Query: 590 PAMQLAAKHCFILEDPPG-DKKEVAHSESIVAE------MADRDIQKDETLEDINVKECN 642
PA ++ A +ED P +K H++ I+ M + D + ++ ++ ++
Sbjct: 217 PASEIEAS----VEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKI 272
Query: 643 SASVL-DE-RDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEK--- 697
SA L DE +D DKK + + KR + ++K N GP+ T K
Sbjct: 273 SAKTLTDEVNSPDSDRRDKK-GGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGH 331
Query: 698 --DEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKD 755
+E DL + + SP N VEE LP K + + + +D ++D
Sbjct: 332 REEEQEDLTKDMDEPSPVPN----VEEVT-LP-KTVNTKKDSESAPVKGGTMTDLDEQED 385
Query: 756 NSLLSDSLPSGKNEPDQRVLSNSVAEPSPP 785
S+ + +GK+E D+ N + P
Sbjct: 386 ESMET----TGKDE-DENSTGNKGEQTKNP 410
Score = 66 (28.3 bits), Expect = 8.7e-22, Sum P(3) = 8.7e-22
Identities = 36/136 (26%), Positives = 58/136 (42%)
Query: 432 DVDGNLKET-TDDAPTNGD-TSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI 489
D ++E+ D+A G T K+ E E GA+E + + E K ++ +
Sbjct: 746 DEPERIEESGNDEARVEGQATDEKKEPKEPREGG-GAIEEEAKEKTSEAPKKDEEKGKE- 803
Query: 490 CEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQ 549
D+ K ++SD + ++ E E K GQE + L+E E+ G T + +
Sbjct: 804 -GDSEKESEKSD---GDPIVDPEKEKEPKEGQE-------EVLKEVVESEGERKT-KVER 851
Query: 550 SFAEVGNPVMALAAFL 565
E GN A AA L
Sbjct: 852 DIGE-GNLSTAAAAAL 866
Score = 64 (27.6 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 23/80 (28%), Positives = 33/80 (41%)
Query: 448 GDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQ 507
G TS + E S + VEGQ E +P + E+ +K K K DE+
Sbjct: 742 GTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGA--IEEEAKEKTSEAPKKDEE 799
Query: 508 MLKSEDTSEGKVGQETGENI 527
K D SE + + G+ I
Sbjct: 800 KGKEGD-SEKESEKSDGDPI 818
Score = 61 (26.5 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 445 PTNGDTSASKDVAE-ASES-KTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDV 502
P G + ++ E SE+ K +G+ S E+ K D + E +PK E
Sbjct: 775 PREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEK-SDGDPIVDPEKEKEPK-EGQE 832
Query: 503 KVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTH 545
+V +++++SE + KV ++ GE A A A H
Sbjct: 833 EVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKH 875
Score = 45 (20.9 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 25/116 (21%), Positives = 49/116 (42%)
Query: 635 DINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEK--PSEKL--NGATGPA 690
D V + S L+E + + ++ + AA + K P+ L +G G
Sbjct: 685 DPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTT 744
Query: 691 NQDTPEK-DEPGD---------LNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQK 736
+ D PE+ +E G+ +E PK P++ +I EE+ + S+ + ++
Sbjct: 745 S-DEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEE 799
>UNIPROTKB|F8VXC8 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 EMBL:AC073896 HGNC:HGNC:11105
ChiTaRS:SMARCC2 OMA:QYIQAEP IPI:IPI01021606
ProteinModelPortal:F8VXC8 SMR:F8VXC8 PRIDE:F8VXC8
Ensembl:ENST00000550164 ArrayExpress:F8VXC8 Bgee:F8VXC8
Uniprot:F8VXC8
Length = 1245
Score = 185 (70.2 bits), Expect = 5.2e-27, Sum P(3) = 5.2e-27
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 150 VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELK 209
++P++ WF + +H +E +ALP FFNGK++ +TP+IY+ RN+++ + NP +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 210 DLSELEVGSLDARQEVMEFLDYWGLINF 237
G + A V FL+ WGLIN+
Sbjct: 485 ACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 147 (56.8 bits), Expect = 5.2e-27, Sum P(3) = 5.2e-27
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 346 TDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHV 405
TD N G +DM + + +AA + +WT+Q YK++WN+++EHV
Sbjct: 601 TDMQNFG-LRTDMYTKKNVPS-KSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHV 658
Query: 406 ATKTKAQCILHFVQMPIEDMFLD 428
++T+ +CILHF+++PIED +L+
Sbjct: 659 GSRTQDECILHFLRLPIEDPYLE 681
Score = 117 (46.2 bits), Expect = 5.2e-27, Sum P(3) = 5.2e-27
Identities = 51/208 (24%), Positives = 83/208 (39%)
Query: 765 SGKNEPDQRVLSNSVA-----EPSPPSKLTNDVDMVSDPQPLENNEPEKQIXXXXX---- 815
+GK +P + S+ +A EP + ND V E EP++
Sbjct: 757 TGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEE 816
Query: 816 XXXXXXXAPKDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDE-------KHD 868
APK E SE E +++D + + E + ++GQ+E
Sbjct: 817 AKEKTSEAPKKDEEKGKEGDSE-KESEKSDGDPIVDPEK-EKEPKEGQEEVLKEVVESEG 874
Query: 869 SKETKNDQYIDKXXXXXXXXXXXXXXXXXXX--XCQEEDQIRQLATSLIEKQLQKLEAKL 926
++TK ++ I + EE +I+ L L+E Q++KLE KL
Sbjct: 875 ERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKL 934
Query: 927 AFFNEMDNVTMRVREQLERSRQRLYQER 954
F E++ + R RE LE RQ+L +R
Sbjct: 935 RHFEELETIMDREREALEYQRQQLLADR 962
Score = 109 (43.4 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 72/313 (23%), Positives = 126/313 (40%)
Query: 432 DVDGNLKETTDDAPTNGDTSASKDVA---EASESKTGAVEGQTQTSPMETSKPEDASELK 488
++D + ET P TSAS+ + + + K ++ + M T K +
Sbjct: 566 ELDDLVPETAKGKPEL-QTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKA 624
Query: 489 ICEDTSKPKDESDVKVDE--QMLKSE--DTSEGKVGQETGENIALKALREAFE------- 537
T + ++ + + E +M K + SE VG T + L LR E
Sbjct: 625 AASATREWTEQETLLLLEALEMYKDDWNKVSE-HVGSRTQDECILHFLRLPIEDPYLEDS 683
Query: 538 AVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQ--LA 595
P P F++ GNPVM+ AFL + P + +A+A+S+L+ S + L
Sbjct: 684 EASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALV 743
Query: 596 AKHCFILEDPPG--DKKEVAHS-ESIVAEMADRDIQKDETLEDINVKECN-SASVLDERD 651
H +E+ K + A ES + +A + E +E+ E DE+
Sbjct: 744 EAHVRKVEEAAKVTGKADPAFGLES--SGIAGTTSDEPERIEESGNDEARVEGQATDEKK 801
Query: 652 LSND--HGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNP 709
+ G IE+ E+ A +K EK G G + +++ EK + + +
Sbjct: 802 EPKEPREGGGAIEEEAKEKTSEAP---KKDEEK--GKEGDSEKES-EKSDGDPIVDPEKE 855
Query: 710 KSPKDNQPSIVEE 722
K PK+ Q +++E
Sbjct: 856 KEPKEGQEEVLKE 868
Score = 68 (29.0 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 28/122 (22%), Positives = 55/122 (45%)
Query: 435 GNLKETTDDAPTNGDT-SASKDVAEASESKTGAVEGQTQTSPME--TSKPEDASELKICE 491
G+ +E +D + D S +V E + KT + ++++P++ T D E + E
Sbjct: 330 GHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESME 389
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFE--AVGYVPTHETPQ 549
T K +DE+ + K+ D E V ++T +I + + F+ +V + P+
Sbjct: 390 TTGKDEDENSTGNKGEQTKNPDLHEDNVTEQT-HHIIIPSYAAWFDYNSVHAIERRALPE 448
Query: 550 SF 551
F
Sbjct: 449 FF 450
Score = 67 (28.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 49/210 (23%), Positives = 86/210 (40%)
Query: 590 PAMQLAAKHCFILEDPPG-DKKEVAHSESIVAE------MADRDIQKDETLEDINVKECN 642
PA ++ A +ED P +K H++ I+ M + D + ++ ++ ++
Sbjct: 217 PASEIEAS----VEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKI 272
Query: 643 SASVL-DE-RDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEK--- 697
SA L DE +D DKK + + KR + ++K N GP+ T K
Sbjct: 273 SAKTLTDEVNSPDSDRRDKK-GGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGH 331
Query: 698 --DEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKD 755
+E DL + + SP N VEE LP K + + + +D ++D
Sbjct: 332 REEEQEDLTKDMDEPSPVPN----VEEVT-LP-KTVNTKKDSESAPVKGGTMTDLDEQED 385
Query: 756 NSLLSDSLPSGKNEPDQRVLSNSVAEPSPP 785
S+ + +GK+E D+ N + P
Sbjct: 386 ESMET----TGKDE-DENSTGNKGEQTKNP 410
Score = 66 (28.3 bits), Expect = 9.5e-22, Sum P(3) = 9.5e-22
Identities = 36/136 (26%), Positives = 58/136 (42%)
Query: 432 DVDGNLKET-TDDAPTNGD-TSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI 489
D ++E+ D+A G T K+ E E GA+E + + E K ++ +
Sbjct: 777 DEPERIEESGNDEARVEGQATDEKKEPKEPREGG-GAIEEEAKEKTSEAPKKDEEKGKE- 834
Query: 490 CEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQ 549
D+ K ++SD + ++ E E K GQE + L+E E+ G T + +
Sbjct: 835 -GDSEKESEKSD---GDPIVDPEKEKEPKEGQE-------EVLKEVVESEGERKT-KVER 882
Query: 550 SFAEVGNPVMALAAFL 565
E GN A AA L
Sbjct: 883 DIGE-GNLSTAAAAAL 897
Score = 61 (26.5 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 445 PTNGDTSASKDVAE-ASES-KTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDV 502
P G + ++ E SE+ K +G+ S E+ K D + E +PK E
Sbjct: 806 PREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEK-SDGDPIVDPEKEKEPK-EGQE 863
Query: 503 KVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTH 545
+V +++++SE + KV ++ GE A A A H
Sbjct: 864 EVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKH 906
Score = 45 (20.9 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 25/116 (21%), Positives = 49/116 (42%)
Query: 635 DINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEK--PSEKL--NGATGPA 690
D V + S L+E + + ++ + AA + K P+ L +G G
Sbjct: 716 DPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTT 775
Query: 691 NQDTPEK-DEPGD---------LNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQK 736
+ D PE+ +E G+ +E PK P++ +I EE+ + S+ + ++
Sbjct: 776 S-DEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEE 830
Score = 42 (19.8 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 659 KKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNE--LSNPKSPKDNQ 716
K+++D VPE + L S+++ N K++P D+ L K N
Sbjct: 565 KELDDLVPETAKGKPELQTSASQQM------LNFPDKGKEKPTDMQNFGLRTDMYTKKNV 618
Query: 717 PS 718
PS
Sbjct: 619 PS 620
>MGI|MGI:1915344 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1915344 GO:GO:0017053 GO:GO:0045892 GO:GO:0045893
GO:GO:0007399 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649
GeneTree:ENSGT00390000018166 OrthoDB:EOG4JHCF5 CTD:6601
ChiTaRS:SMARCC2 EMBL:BC058720 EMBL:BC062102 IPI:IPI00381019
IPI:IPI00459742 RefSeq:NP_001107568.1 RefSeq:NP_001107569.1
RefSeq:NP_937803.1 UniGene:Mm.417338 ProteinModelPortal:Q6PDG5
SMR:Q6PDG5 DIP:DIP-48884N IntAct:Q6PDG5 STRING:Q6PDG5
PhosphoSite:Q6PDG5 PaxDb:Q6PDG5 PRIDE:Q6PDG5
Ensembl:ENSMUST00000026433 Ensembl:ENSMUST00000105235 GeneID:68094
KEGG:mmu:68094 UCSC:uc007hmw.2 UCSC:uc007hmx.2 InParanoid:Q6PDG5
OMA:QYIQAEP NextBio:326404 Bgee:Q6PDG5 Genevestigator:Q6PDG5
GermOnline:ENSMUSG00000025369 Uniprot:Q6PDG5
Length = 1213
Score = 185 (70.2 bits), Expect = 6.0e-27, Sum P(3) = 6.0e-27
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 150 VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELK 209
++P++ WF + +H +E +ALP FFNGK++ +TP+IY+ RN+++ + NP +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 210 DLSELEVGSLDARQEVMEFLDYWGLINF 237
G + A V FL+ WGLIN+
Sbjct: 485 ACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 151 (58.2 bits), Expect = 6.0e-27, Sum P(3) = 6.0e-27
Identities = 65/281 (23%), Positives = 118/281 (41%)
Query: 370 EAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDC 429
+AA + +WT+Q YK++WN+++EHV ++T+ +CILHF+++PIED +L+
Sbjct: 592 KAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLED 651
Query: 430 DDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI 489
+ G L +G+ S AS +++ E SK ++ +
Sbjct: 652 SEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTAL 711
Query: 490 CE-DTSKPKDESDV--KVDEQM-LKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTH 545
E K ++ + V K D L+S + G E E I EA
Sbjct: 712 VEAHVRKVEEAAKVTGKADPAFGLESSGIA-GTASDEP-ERIEESGTEEARPEGQAADEK 769
Query: 546 ETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDP 605
+ P+ E G V A +++ + K G+S + I+ DP
Sbjct: 770 KEPKEPREGGGAVEEEAK-------EEISEVPKKDEEKGKEGDSEKESEKSDGDPIV-DP 821
Query: 606 PGDKKEVAHSESIVAEMADRDIQKDETLE-DINVKECNSAS 645
DK+ E ++ E+A+ + ++ +E DI ++A+
Sbjct: 822 EKDKEPTEGQEEVLKEVAEPEGERKTKVERDIGEGNLSTAA 862
Score = 112 (44.5 bits), Expect = 6.0e-27, Sum P(3) = 6.0e-27
Identities = 38/134 (28%), Positives = 54/134 (40%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRL-------YQERA 955
EE +I+ L L+E Q++KLE KL F E++ + R RE LE RQ+L + E+
Sbjct: 880 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQL 939
Query: 956 LIIQARLGPSRVMQPSVPANRNPMTFANSVAXXXXXXXXXXXXXXXXXVPQSSTPSNPFG 1015
+ R Q + P T VP ++ S P G
Sbjct: 940 KYAEMRARQQHFQQMHQQQQQQPPTLPPGSQPIPPTGAAGPPTVHGLAVPPAAVASAPPG 999
Query: 1016 STTTAGSSIRPSSQ 1029
S GS + PS Q
Sbjct: 1000 SGAPPGS-LGPSEQ 1012
Score = 65 (27.9 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 27/122 (22%), Positives = 54/122 (44%)
Query: 435 GNLKETTDDAPTNGDT-SASKDVAEASESKTGAVEGQTQTSPMETSKPEDASEL--KICE 491
G+ +E +D + D S +V E + KT + ++++P++ D E + E
Sbjct: 330 GHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQDDESME 389
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFE--AVGYVPTHETPQ 549
T K +DE+ + K+ D E V ++T +I + + F+ +V + P+
Sbjct: 390 TTGKDEDENSTGNKGEQTKNPDLHEDNVTEQT-HHIIIPSYAAWFDYNSVHAIERRALPE 448
Query: 550 SF 551
F
Sbjct: 449 FF 450
Score = 64 (27.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 49/210 (23%), Positives = 84/210 (40%)
Query: 590 PAMQLAAKHCFILEDPPG-DKKEVAHSESIVAE------MADRDIQKDETLEDINVKECN 642
PA ++ A +ED P +K H++ I+ M + D + + ++ ++
Sbjct: 217 PASEIEAS----VEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVSDDKSPVSRRKKI 272
Query: 643 SASVL-DE-RDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEK--- 697
SA L DE +D DKK + + KR + ++K N GP+ T K
Sbjct: 273 SAKTLTDEVNSPDSDRRDKK-GGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGH 331
Query: 698 --DEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKD 755
+E DL + + SP N VEE LP K + + + +D + D
Sbjct: 332 REEEQEDLTKDMDEPSPVPN----VEEVT-LP-KTVNTKKDSESAPVKGGTMTDLDEQDD 385
Query: 756 NSLLSDSLPSGKNEPDQRVLSNSVAEPSPP 785
S+ + +GK+E D+ N + P
Sbjct: 386 ESMET----TGKDE-DENSTGNKGEQTKNP 410
Score = 53 (23.7 bits), Expect = 7.3e-17, Sum P(3) = 7.3e-17
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 839 NEPQQTDSITGTETARVEDQNRDGQDEKHDSKETK 873
+EP++ + +GTE AR E Q DEK + KE +
Sbjct: 746 DEPERIEE-SGTEEARPEGQ---AADEKKEPKEPR 776
Score = 51 (23.0 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 38/174 (21%), Positives = 68/174 (39%)
Query: 635 DINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEK--PSEKL--NGATGPA 690
D V + S L+E + + ++ + AA + K P+ L +G G A
Sbjct: 685 DPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTA 744
Query: 691 NQDTPEK-DEPGD---------LNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXX 740
+ D PE+ +E G +E PK P++ ++ EE+ + S+V + ++
Sbjct: 745 S-DEPERIEESGTEEARPEGQAADEKKEPKEPREGGGAVEEEAKEEISEVPKKDEEKGKE 803
Query: 741 XXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPSKLTNDVDM 794
+ D + D P+ E + VL VAEP K + D+
Sbjct: 804 GDSEKESEKSDGDPIVDPEKDKEPT---EGQEEVLKE-VAEPEGERKTKVERDI 853
Score = 50 (22.7 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 30/130 (23%), Positives = 49/130 (37%)
Query: 432 DVDGNLKET-TDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDA------ 484
D ++E+ T++A G + K + GAVE + + E K ++
Sbjct: 746 DEPERIEESGTEEARPEGQAADEKKEPKEPREGGGAVEEEAKEEISEVPKKDEEKGKEGD 805
Query: 485 SELKICEDTSKP-----KDESDVKVDEQMLKSEDTSEG----KVGQETGENIALKALREA 535
SE + + P KD+ + E++LK EG KV ++ GE A A
Sbjct: 806 SEKESEKSDGDPIVDPEKDKEPTEGQEEVLKEVAEPEGERKTKVERDIGEGNLSTAAAAA 865
Query: 536 FEAVGYVPTH 545
A H
Sbjct: 866 LAAAAVKAKH 875
>UNIPROTKB|F1N4N6 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
SMART:SM00717 InterPro:IPR001357 GO:GO:0017053 GO:GO:0045892
GO:GO:0045893 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GeneTree:ENSGT00390000018166 OMA:QYIQAEP EMBL:DAAA02013534
IPI:IPI00712028 Ensembl:ENSBTAT00000019562 Uniprot:F1N4N6
Length = 1094
Score = 186 (70.5 bits), Expect = 6.5e-27, Sum P(3) = 6.5e-27
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 110 DDSTFEAIEELNKASEEWAAL---EAKIEADFEAIRSRDSNVHVV-PTHCGWFSWTKIHP 165
D+ E++E K +E + E D + H++ P++ WF + +H
Sbjct: 345 DEQEDESMETTGKDEDESSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHA 404
Query: 166 LEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEV 225
+E +ALP FFNGK++ +TP+IY+ RN+++ + NP + G + A V
Sbjct: 405 IERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRV 464
Query: 226 MEFLDYWGLINF 237
FL+ WGLIN+
Sbjct: 465 HAFLEQWGLINY 476
Score = 147 (56.8 bits), Expect = 6.5e-27, Sum P(3) = 6.5e-27
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 346 TDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHV 405
TD N G +DM + + +AA + +WT+Q YK++WN+++EHV
Sbjct: 565 TDMQNFG-LRTDMYTKKNVPS-KSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHV 622
Query: 406 ATKTKAQCILHFVQMPIEDMFLD 428
++T+ +CILHF+++PIED +L+
Sbjct: 623 GSRTQDECILHFLRLPIEDPYLE 645
Score = 113 (44.8 bits), Expect = 6.5e-27, Sum P(3) = 6.5e-27
Identities = 38/141 (26%), Positives = 61/141 (43%)
Query: 823 APKDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDE-------KHDSKETKND 875
APK + SE E +++D T E + ++GQ+E ++TK +
Sbjct: 788 APKKDDEKGKDGDSE-KESEKSDG-DPTADPEKEKEPKEGQEEVLKEVVESEGERKTKVE 845
Query: 876 QYIDKXXXXXXXXXXXXXXXXXXX--XCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMD 933
+ I + EE +I+ L L+E Q++KLE KL F E++
Sbjct: 846 RDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELE 905
Query: 934 NVTMRVREQLERSRQRLYQER 954
+ R RE LE RQ+L +R
Sbjct: 906 TIMDREREALEYQRQQLLADR 926
Score = 107 (42.7 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 46/186 (24%), Positives = 81/186 (43%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQ--LAAKHCF 600
P P F++ GNPVM+ AFL + P + +A+A+S+L+ S + L H
Sbjct: 653 PLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVR 712
Query: 601 ILEDPPG--DKKEVAHS-ESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHG 657
+E+ K + A ES + +A + E +E+ E + E D
Sbjct: 713 KVEEAAKVTGKADPAFGLES--SGIAGTTSDEPERIEESGTDEARAEGQATE-DKKEPKE 769
Query: 658 DKKIEDSVPEE-KRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQ 716
++ +V EE K + +K EK G G + +++ EK + + K PK+ Q
Sbjct: 770 PREGVGTVEEEAKEKTSEAPKKDDEK--GKDGDSEKES-EKSDGDPTADPEKEKEPKEGQ 826
Query: 717 PSIVEE 722
+++E
Sbjct: 827 EEVLKE 832
Score = 71 (30.1 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 435 GNLKETTDDAPTNGDT-SASKDVAEASESKTGAVEGQTQTSPME--TSKPEDASELKICE 491
G+ +E +D + D S +V E + KT + ++++P++ T D E + E
Sbjct: 294 GHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESME 353
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFE--AVGYVPTHETPQ 549
T K +DES + K+ D E V ++T +I + + F+ +V + P+
Sbjct: 354 TTGKDEDESSTGNKGEQTKNPDLHEDNVTEQT-HHIIIPSYAAWFDYNSVHAIERRALPE 412
Query: 550 SF 551
F
Sbjct: 413 FF 414
Score = 69 (29.3 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 33/130 (25%), Positives = 50/130 (38%)
Query: 432 DVDGNLKET-TDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDA------ 484
D ++E+ TD+A G + K + G VE + + E K +D
Sbjct: 741 DEPERIEESGTDEARAEGQATEDKKEPKEPREGVGTVEEEAKEKTSEAPKKDDEKGKDGD 800
Query: 485 ----SELKICEDTSKPKDESDVKV-DEQMLKSEDTSEG----KVGQETGENIALKALREA 535
SE + T+ P+ E + K E++LK SEG KV ++ GE A A
Sbjct: 801 SEKESEKSDGDPTADPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAA 860
Query: 536 FEAVGYVPTH 545
A H
Sbjct: 861 LAAAAVKAKH 870
Score = 63 (27.2 bits), Expect = 9.3e-22, Sum P(3) = 9.3e-22
Identities = 26/95 (27%), Positives = 37/95 (38%)
Query: 448 GDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQ 507
G TS + E S + EGQ E +P + + E+ +K K K D++
Sbjct: 737 GTTSDEPERIEESGTDEARAEGQATEDKKEPKEPREG--VGTVEEEAKEKTSEAPKKDDE 794
Query: 508 MLK---SEDTSEGKVGQETGENIALKALREAFEAV 539
K SE SE G T + K +E E V
Sbjct: 795 KGKDGDSEKESEKSDGDPTADPEKEKEPKEGQEEV 829
Score = 50 (22.7 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 26/127 (20%), Positives = 46/127 (36%)
Query: 616 ESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK--KIEDSVPEEKRHAA 673
E + + + ++K E + K + A L+ ++ D+ +IE+S +E R
Sbjct: 700 EEVPTALVEAHVRKVEEAAKVTGK-ADPAFGLESSGIAGTTSDEPERIEESGTDEARAEG 758
Query: 674 SLNE---KPSEKLNGATGPANQDTPEK--------DEPGDLNELSNPKSPKDNQPSIVEE 722
E +P E G G ++ EK DE G + D P+ E
Sbjct: 759 QATEDKKEPKEPREGV-GTVEEEAKEKTSEAPKKDDEKGKDGDSEKESEKSDGDPTADPE 817
Query: 723 SNDLPSK 729
P +
Sbjct: 818 KEKEPKE 824
Score = 48 (22.0 bits), Expect = 3.2e-20, Sum P(3) = 3.2e-20
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 839 NEPQQTDSITGTETARVEDQNRDGQDEKHDSKE 871
+EP++ + +GT+ AR E Q + + E + +E
Sbjct: 741 DEPERIEE-SGTDEARAEGQATEDKKEPKEPRE 772
Score = 43 (20.2 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 659 KKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNE--LSNPKSPKDNQ 716
K+++D VPE + L S+++ N K++P D+ L K N
Sbjct: 529 KELDDLVPETAKGKPELQNSASQQM------LNFPDKGKEKPTDMQNFGLRTDMYTKKNV 582
Query: 717 PS 718
PS
Sbjct: 583 PS 584
Score = 41 (19.5 bits), Expect = 5.2e-16, Sum P(3) = 5.2e-16
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 477 ETSKPEDASELK-ICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALK 530
+T EL + +T+K K E +QML D +GK +N L+
Sbjct: 521 DTKAGRKGKELDDLVPETAKGKPELQNSASQQMLNFPD--KGKEKPTDMQNFGLR 573
>UNIPROTKB|F1SM00 [details] [associations]
symbol:LOC100621845 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CU498845 Ensembl:ENSSSCT00000000410 OMA:AWFDYNX Uniprot:F1SM00
Length = 1167
Score = 185 (70.2 bits), Expect = 6.2e-26, Sum P(4) = 6.2e-26
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 150 VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELK 209
++P++ WF + +H +E +ALP FFNGK++ +TP+IY+ RN+++ + NP +
Sbjct: 437 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 496
Query: 210 DLSELEVGSLDARQEVMEFLDYWGLINF 237
G + A V FL+ WGLIN+
Sbjct: 497 ACRRNLAGDVCAIMRVHAFLEQWGLINY 524
Score = 147 (56.8 bits), Expect = 6.2e-26, Sum P(4) = 6.2e-26
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 346 TDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHV 405
TD N G +DM + + +AA + +WT+Q YK++WN+++EHV
Sbjct: 613 TDMQNFG-LRTDMYTKKNVPS-KSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHV 670
Query: 406 ATKTKAQCILHFVQMPIEDMFLD 428
++T+ +CILHF+++PIED +L+
Sbjct: 671 GSRTQDECILHFLRLPIEDPYLE 693
Score = 112 (44.5 bits), Expect = 6.2e-26, Sum P(4) = 6.2e-26
Identities = 37/138 (26%), Positives = 58/138 (42%)
Query: 825 KDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDE------KHDSKETKNDQYI 878
KD E + +E D I G E + ++GQ+E ++TK ++ I
Sbjct: 841 KDDEKGKEGDSEKESEKSDGDPI-GPVDPEKEKEPKEGQEEVLKEVESEGERKTKVERDI 899
Query: 879 DKXXXXXXXXXXXXXXXXXXX--XCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVT 936
+ EE +I+ L L+E Q++KLE KL F E++ +
Sbjct: 900 GEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIM 959
Query: 937 MRVREQLERSRQRLYQER 954
R RE LE RQ+L +R
Sbjct: 960 DREREALEYQRQQLLADR 977
Score = 100 (40.3 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 68/312 (21%), Positives = 122/312 (39%)
Query: 432 DVDGNLKETTDDAPTNGDTSASKDVA---EASESKTGAVEGQTQTSPMETSKPEDASELK 488
++D + ET P TSAS+ + + + K ++ + M T K +
Sbjct: 578 ELDDLVPETAKGKPEL-QTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKA 636
Query: 489 ICEDTSKPKDESDVKVDE--QMLKSE--DTSEGKVGQETGENIALKALREAFE------- 537
T + ++ + + E +M K + SE VG T + L LR E
Sbjct: 637 AASATREWTEQETLLLLEALEMYKDDWNKVSE-HVGSRTQDECILHFLRLPIEDPYLEDS 695
Query: 538 AVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAK 597
P P F++ GNPVM+ AFL + P + +A+A+S+L+ S + A
Sbjct: 696 EASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALV 755
Query: 598 HCFILEDPPGDKKEVAHSESIVAEMAD-RDIQKDETLEDINVKECNSASVLDERDLSNDH 656
+ + K + E + DE E I +E + E + +
Sbjct: 756 EAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEP-ERIGPEESGTDEARAEGQATEEK 814
Query: 657 GDKKIE----DSVPEE-KRHAASLNEKPSEKLNGATGPANQDTPEKD-EPGDLNELSNPK 710
+ K +V EE K + + +K EK G G + +++ + D +P + K
Sbjct: 815 KEPKEPREGVGAVEEEAKEKTSEVPKKDDEK--GKEGDSEKESEKSDGDPIGPVDPEKEK 872
Query: 711 SPKDNQPSIVEE 722
PK+ Q +++E
Sbjct: 873 EPKEGQEEVLKE 884
Score = 68 (29.0 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 28/122 (22%), Positives = 55/122 (45%)
Query: 435 GNLKETTDDAPTNGDT-SASKDVAEASESKTGAVEGQTQTSPME--TSKPEDASELKICE 491
G+ +E +D + D S +V E + KT + ++++P++ T D E + E
Sbjct: 342 GHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESME 401
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFE--AVGYVPTHETPQ 549
T K +DE+ + K+ D E V ++T +I + + F+ +V + P+
Sbjct: 402 TTGKDEDENSTGNKGEQTKNPDLHEDNVTEQT-HHIIIPSYAAWFDYNSVHAIERRALPE 460
Query: 550 SF 551
F
Sbjct: 461 FF 462
Score = 67 (28.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 49/210 (23%), Positives = 86/210 (40%)
Query: 590 PAMQLAAKHCFILEDPPG-DKKEVAHSESIVAE------MADRDIQKDETLEDINVKECN 642
PA ++ A +ED P +K H++ I+ M + D + ++ ++ ++
Sbjct: 229 PASEIEAS----VEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKI 284
Query: 643 SASVL-DE-RDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEK--- 697
SA L DE +D DKK + + KR + ++K N GP+ T K
Sbjct: 285 SAKTLTDEVNSPDSDRRDKK-GGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGH 343
Query: 698 --DEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKD 755
+E DL + + SP N VEE LP K + + + +D ++D
Sbjct: 344 REEEQEDLTKDMDEPSPVPN----VEEVT-LP-KTVNTKKDSESAPVKGGTMTDLDEQED 397
Query: 756 NSLLSDSLPSGKNEPDQRVLSNSVAEPSPP 785
S+ + +GK+E D+ N + P
Sbjct: 398 ESMET----TGKDE-DENSTGNKGEQTKNP 422
Score = 56 (24.8 bits), Expect = 8.0e-21, Sum P(3) = 8.0e-21
Identities = 19/77 (24%), Positives = 29/77 (37%)
Query: 688 GPANQDTPEKDEPGDLNE-LSNPKSPKDNQPSIVEESNDLPSKV--------LQSSQKXX 738
GP T E G E PK P++ ++ EE+ + S+V + +
Sbjct: 795 GPEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEVPKKDDEKGKEGDSEKE 854
Query: 739 XXXXXXXPAPPVDVEKD 755
P PVD EK+
Sbjct: 855 SEKSDGDPIGPVDPEKE 871
Score = 42 (19.8 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 839 NEPQQTD-SITGTETARVEDQNRDGQDEKHDSKETK 873
+EP++ +GT+ AR E Q +EK + KE +
Sbjct: 789 DEPERIGPEESGTDEARAEGQ---ATEEKKEPKEPR 821
Score = 42 (19.8 bits), Expect = 8.4e-16, Sum P(3) = 8.4e-16
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 659 KKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNE--LSNPKSPKDNQ 716
K+++D VPE + L S+++ N K++P D+ L K N
Sbjct: 577 KELDDLVPETAKGKPELQTSASQQM------LNFPDKGKEKPTDMQNFGLRTDMYTKKNV 630
Query: 717 PS 718
PS
Sbjct: 631 PS 632
Score = 40 (19.1 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 23/89 (25%), Positives = 31/89 (34%)
Query: 430 DDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAV----EGQTQTSPMET--SKPED 483
D D G + + P G K+V E KT EG T+ +
Sbjct: 859 DGDPIGPVDPEKEKEPKEGQEEVLKEVESEGERKTKVERDIGEGNLSTAAAAALAAAAVK 918
Query: 484 ASELKICEDTSKPKDESDVKVDEQMLKSE 512
A L E+ K K + V+ QM K E
Sbjct: 919 AKHLAAVEER-KIKSLVALLVETQMKKLE 946
Score = 39 (18.8 bits), Expect = 6.2e-26, Sum P(4) = 6.2e-26
Identities = 20/116 (17%), Positives = 46/116 (39%)
Query: 616 ESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK--KI--EDSVPEEKRH 671
E + + + ++K E + K + A L+ ++ D+ +I E+S +E R
Sbjct: 748 EEVPTALVEAHVRKVEEAAKVTGK-ADPAFGLESSGIAGTTSDEPERIGPEESGTDEARA 806
Query: 672 AASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLP 727
E+ E G + K++ ++ + + K + + E+S+ P
Sbjct: 807 EGQATEEKKEPKEPREGVGAVEEEAKEKTSEVPKKDDEKGKEGDSEKESEKSDGDP 862
>UNIPROTKB|I3LRY4 [details] [associations]
symbol:I3LRY4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:CU694915 Ensembl:ENSSSCT00000032096 Uniprot:I3LRY4
Length = 1212
Score = 185 (70.2 bits), Expect = 7.5e-26, Sum P(4) = 7.5e-26
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 150 VVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELK 209
++P++ WF + +H +E +ALP FFNGK++ +TP+IY+ RN+++ + NP +
Sbjct: 391 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 450
Query: 210 DLSELEVGSLDARQEVMEFLDYWGLINF 237
G + A V FL+ WGLIN+
Sbjct: 451 ACRRNLAGDVCAIMRVHAFLEQWGLINY 478
Score = 147 (56.8 bits), Expect = 7.5e-26, Sum P(4) = 7.5e-26
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 346 TDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHV 405
TD N G +DM + + +AA + +WT+Q YK++WN+++EHV
Sbjct: 567 TDMQNFG-LRTDMYTKKNVPS-KSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHV 624
Query: 406 ATKTKAQCILHFVQMPIEDMFLD 428
++T+ +CILHF+++PIED +L+
Sbjct: 625 GSRTQDECILHFLRLPIEDPYLE 647
Score = 112 (44.5 bits), Expect = 7.5e-26, Sum P(4) = 7.5e-26
Identities = 37/138 (26%), Positives = 58/138 (42%)
Query: 825 KDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDE------KHDSKETKNDQYI 878
KD E + +E D I G E + ++GQ+E ++TK ++ I
Sbjct: 795 KDDEKGKEGDSEKESEKSDGDPI-GPVDPEKEKEPKEGQEEVLKEVESEGERKTKVERDI 853
Query: 879 DKXXXXXXXXXXXXXXXXXXX--XCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVT 936
+ EE +I+ L L+E Q++KLE KL F E++ +
Sbjct: 854 GEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIM 913
Query: 937 MRVREQLERSRQRLYQER 954
R RE LE RQ+L +R
Sbjct: 914 DREREALEYQRQQLLADR 931
Score = 100 (40.3 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 68/312 (21%), Positives = 122/312 (39%)
Query: 432 DVDGNLKETTDDAPTNGDTSASKDVA---EASESKTGAVEGQTQTSPMETSKPEDASELK 488
++D + ET P TSAS+ + + + K ++ + M T K +
Sbjct: 532 ELDDLVPETAKGKPEL-QTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKA 590
Query: 489 ICEDTSKPKDESDVKVDE--QMLKSE--DTSEGKVGQETGENIALKALREAFE------- 537
T + ++ + + E +M K + SE VG T + L LR E
Sbjct: 591 AASATREWTEQETLLLLEALEMYKDDWNKVSE-HVGSRTQDECILHFLRLPIEDPYLEDS 649
Query: 538 AVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAK 597
P P F++ GNPVM+ AFL + P + +A+A+S+L+ S + A
Sbjct: 650 EASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALV 709
Query: 598 HCFILEDPPGDKKEVAHSESIVAEMAD-RDIQKDETLEDINVKECNSASVLDERDLSNDH 656
+ + K + E + DE E I +E + E + +
Sbjct: 710 EAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEP-ERIGPEESGTDEARAEGQATEEK 768
Query: 657 GDKKIE----DSVPEE-KRHAASLNEKPSEKLNGATGPANQDTPEKD-EPGDLNELSNPK 710
+ K +V EE K + + +K EK G G + +++ + D +P + K
Sbjct: 769 KEPKEPREGVGAVEEEAKEKTSEVPKKDDEK--GKEGDSEKESEKSDGDPIGPVDPEKEK 826
Query: 711 SPKDNQPSIVEE 722
PK+ Q +++E
Sbjct: 827 EPKEGQEEVLKE 838
Score = 67 (28.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 49/210 (23%), Positives = 86/210 (40%)
Query: 590 PAMQLAAKHCFILEDPPG-DKKEVAHSESIVAE------MADRDIQKDETLEDINVKECN 642
PA ++ A +ED P +K H++ I+ M + D + ++ ++ ++
Sbjct: 183 PASEIEAS----VEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKI 238
Query: 643 SASVL-DE-RDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEK--- 697
SA L DE +D DKK + + KR + ++K N GP+ T K
Sbjct: 239 SAKTLTDEVNSPDSDRRDKK-GGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGH 297
Query: 698 --DEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKD 755
+E DL + + SP N VEE LP K + + + +D ++D
Sbjct: 298 REEEQEDLTKDMDEPSPVPN----VEEVT-LP-KTVNTKKDSESAPVKGGTMTDLDEQED 351
Query: 756 NSLLSDSLPSGKNEPDQRVLSNSVAEPSPP 785
S+ + +GK+E D+ N + P
Sbjct: 352 ESMET----TGKDE-DENSTGNKGEQTKNP 376
Score = 56 (24.8 bits), Expect = 9.2e-21, Sum P(3) = 9.2e-21
Identities = 19/77 (24%), Positives = 29/77 (37%)
Query: 688 GPANQDTPEKDEPGDLNE-LSNPKSPKDNQPSIVEESNDLPSKV--------LQSSQKXX 738
GP T E G E PK P++ ++ EE+ + S+V + +
Sbjct: 749 GPEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEVPKKDDEKGKEGDSEKE 808
Query: 739 XXXXXXXPAPPVDVEKD 755
P PVD EK+
Sbjct: 809 SEKSDGDPIGPVDPEKE 825
Score = 42 (19.8 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 839 NEPQQTD-SITGTETARVEDQNRDGQDEKHDSKETK 873
+EP++ +GT+ AR E Q +EK + KE +
Sbjct: 743 DEPERIGPEESGTDEARAEGQ---ATEEKKEPKEPR 775
Score = 42 (19.8 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 659 KKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNE--LSNPKSPKDNQ 716
K+++D VPE + L S+++ N K++P D+ L K N
Sbjct: 531 KELDDLVPETAKGKPELQTSASQQM------LNFPDKGKEKPTDMQNFGLRTDMYTKKNV 584
Query: 717 PS 718
PS
Sbjct: 585 PS 586
Score = 40 (19.1 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 23/89 (25%), Positives = 31/89 (34%)
Query: 430 DDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAV----EGQTQTSPMET--SKPED 483
D D G + + P G K+V E KT EG T+ +
Sbjct: 813 DGDPIGPVDPEKEKEPKEGQEEVLKEVESEGERKTKVERDIGEGNLSTAAAAALAAAAVK 872
Query: 484 ASELKICEDTSKPKDESDVKVDEQMLKSE 512
A L E+ K K + V+ QM K E
Sbjct: 873 AKHLAAVEER-KIKSLVALLVETQMKKLE 900
Score = 39 (18.8 bits), Expect = 7.5e-26, Sum P(4) = 7.5e-26
Identities = 20/116 (17%), Positives = 46/116 (39%)
Query: 616 ESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK--KI--EDSVPEEKRH 671
E + + + ++K E + K + A L+ ++ D+ +I E+S +E R
Sbjct: 702 EEVPTALVEAHVRKVEEAAKVTGK-ADPAFGLESSGIAGTTSDEPERIGPEESGTDEARA 760
Query: 672 AASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLP 727
E+ E G + K++ ++ + + K + + E+S+ P
Sbjct: 761 EGQATEEKKEPKEPREGVGAVEEEAKEKTSEVPKKDDEKGKEGDSEKESEKSDGDP 816
>POMBASE|SPAC17G6.10 [details] [associations]
symbol:ssr1 "SWI/SNF and RSC complex subunit Ssr1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0016586 "RSC complex" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=NAS] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 PomBase:SPAC17G6.10 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000122
GO:GO:0000790 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0016586 HSSP:P32591 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 PIR:T37842 RefSeq:NP_594257.1 ProteinModelPortal:O13788
DIP:DIP-48380N STRING:O13788 EnsemblFungi:SPAC17G6.10.1
GeneID:2542400 KEGG:spo:SPAC17G6.10 OMA:LCARCYV NextBio:20803459
Uniprot:O13788
Length = 527
Score = 288 (106.4 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 103/443 (23%), Positives = 180/443 (40%)
Query: 119 ELNKASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGK 178
EL+ + +E E + EA E + S+ V V P WF ++K+H +E++ P FF+GK
Sbjct: 24 ELDVSKKEDTEPEVRDEAK-EFLLSQLPQVEV-PEWAQWFDFSKVHEIEKKQNPEFFDGK 81
Query: 179 SQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFH 238
+ +TP++Y E R++++ F N + G + A V FL+ WGLIN++
Sbjct: 82 NTSKTPEVYKEYRDFMISTFRLNSKVYLTFTACRRNLAGDVCAVLRVHRFLEQWGLINYN 141
Query: 239 PFPHVESSVANSDGDRMTXXXXXXXXKKGSLL----EKLYRFEEIKAGPPVAPMPSITFP 294
P S LL + R + + P +I P
Sbjct: 142 VNPDTRPSKIGPPSTSHFQILADTPRGLVPLLPPPSSSIPRSKAVTIEDPSIVRTNIYDP 201
Query: 295 AVPSGLFPESAIAEE---LAKLEGPAVEY-----HCNSCSADCSRKRYHCQKQADFDLCT 346
++ L + + + L+ L ++ HC C + Y Q +++C
Sbjct: 202 SLDDVLKGKGSTPNQKPSLSNLHENNIDQSDSPQHCYCCGNKFNESYYQSQTAQKYNVCI 261
Query: 347 DCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVA 406
C+ +F S + +D+ V + WT Q Y ++W ++A HV
Sbjct: 262 SCYQQNRFPSPTTIADY-KEVAIQNKIEDDDTWTAQELVLLSEGVEMYSDDWAKVASHVN 320
Query: 407 TKTKAQCILHFVQMPIEDMFLDCDDDVDGN--LKETTDDAPTNGDTS-ASKDVAEAS-ES 462
TK+ +CIL F+ +P D L D V N + P S +K V +S
Sbjct: 321 TKSVEECILKFLNLPSSDKALFKMDKVHTNPVVDSLQGKNPILSVVSFLAKMVPPSSFTQ 380
Query: 463 KTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQE 522
K+ A E ++ E+ P+ SE E K ++SD + E L +E+ + ++
Sbjct: 381 KSSAKEEESDKVKGESVYPKPESESYDVEMNGKSLEDSD-SLSELYLTNEEKKMASIIKD 439
Query: 523 TGENIALKALREAFEAVGYVPTH 545
+ N+ +K + Y+ H
Sbjct: 440 S-VNVQIKLIESKLSHFDYLDQH 461
Score = 59 (25.8 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
EE ++ + + Q++ +E+KL+ F+ +D ++L+ Q Y+E+
Sbjct: 429 EEKKMASIIKDSVNVQIKLIESKLSHFDYLDQHIRLKSQELDAFAQATYREK 480
>CGD|CAL0002007 [details] [associations]
symbol:orf19.4488 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0044109 "cellular alcohol
catabolic process" evidence=IEA] [GO:0031496 "positive regulation
of mating type switching" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0005987 "sucrose catabolic
process" evidence=IEA] [GO:0000436 "carbon catabolite activation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
CGD:CAL0002007 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AACQ01000141 KO:K11772
RefSeq:XP_712915.1 ProteinModelPortal:Q59TH7 SMR:Q59TH7
STRING:Q59TH7 GeneID:3645438 KEGG:cal:CaO19.4488 Uniprot:Q59TH7
Length = 971
Score = 219 (82.2 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 86/334 (25%), Positives = 139/334 (41%)
Query: 115 EAIEELNKASEEWAALEAKIEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAF 174
E EE + +E + E E + + +++ V+P++ WF+ KIH +E+++LP F
Sbjct: 386 EEDEEDEEDDQEEEDEDEPEEPPKEKPQYKQTHLIVIPSYASWFNMKKIHKIEKESLPEF 445
Query: 175 FNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGL 234
F+ ++P +Y+ RN+++ + NP + L VG + V FL+ WGL
Sbjct: 446 FDSIHPSKSPKLYVNYRNFMINSYRLNPNEFLTLTSCRRNLVGDVGTLMRVHRFLNKWGL 505
Query: 235 INFHPFPHVESSVANSDGDRMTXXXXXXXXKKGSLLEKLYRFEEIKAGPPVAPMPSITFP 294
IN+ P K G LEK+ + + P + F
Sbjct: 506 INYQVRPQF---------------------KPGYALEKMPNGQSMDL--PYTGDYHVKFD 542
Query: 295 AVPSGLFP--ESAIAEE---LAKLEGPAVEYHCNSCSADCSR-KRYHCQKQADFDLCTDC 348
P GLFP S I E + KL+ + NS S + + K+ +Q
Sbjct: 543 T-PRGLFPFDTSRIPVERVDVKKLQ-QLMNESSNSNSGEVKQEKQPPPPQQPPQQQQKQN 600
Query: 349 FNNGK-FGSDMSSSDFI--LMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAEHV 405
N GK G + I P + G WT +K +W +IA V
Sbjct: 601 GNKGKKHGLEEEEKVEIEGSQPPLKKKHQEDG-WTKTEKDALISAVKTFKNDWYKIAHQV 659
Query: 406 A-TKTKAQCILHFVQMPIEDMFLDCDDDVDGNLK 438
KT QCIL F+++P+ED F +D+ + N+K
Sbjct: 660 GGNKTPEQCILEFLKLPLEDKFNPINDEDETNIK 693
Score = 111 (44.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 73/356 (20%), Positives = 134/356 (37%)
Query: 430 DDDVDGNLKETTDDAPTNGDTSASKDVAEAS-ESKTGAVEGQTQTSPMETSKPEDASELK 488
D+D D K+++D+ D +++EAS E T +TQT+P E E +
Sbjct: 59 DEDGDTEAKQSSDNNDAANDNEEGGNLSEASTEESTEESAEETQTNPTEDKNNEQQQQ-- 116
Query: 489 ICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENI------ALKALREAFEAVGYV 542
D + E+ V+ +E + K + ++ A A+ A E+
Sbjct: 117 ---DDDDAESENKVESNEHQDNTNSNDNSKQDSNSDNDMQFDIPDAPDAIDAASESEKQE 173
Query: 543 PTH---ETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHC 599
PT+ + Q +V P AF T + T + K G + KH
Sbjct: 174 PTNVDADDNQDKMDVDIPQETSIAFTTNTQNTN-TEEYEKEESKQELGEDEEL----KH- 227
Query: 600 FILEDPPG-DKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSND-HG 657
I ED P D+ ++++ D+ +T IN + N +D+ D S D
Sbjct: 228 -IQEDDPSFDENYNSNNDP------DKSNDDFDTSALINGDDFNME--IDDLDYSKDVES 278
Query: 658 DKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQP 717
+ ++ PEE+ +K + +L+ + +K+ ++ E S ++P ++QP
Sbjct: 279 ESNQQEGKPEEEEEE---EQKKNSELSEVKSNVESTSDQKES--EIKEESTGENPNESQP 333
Query: 718 SIVEESNDLPSKVLQSSQKXXXXXXXXXP-APPVDVEKDNSLLSDSLPSGKNEPDQ 772
+ ++ L S+Q DV+ D S + E D+
Sbjct: 334 TTTSVVGASATEPLSSNQNTSIASSEVKTNTTDKDVDMDQQQKEVEPESKEKEEDE 389
Score = 100 (40.3 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 93/424 (21%), Positives = 162/424 (38%)
Query: 470 QTQTSPMETSKPE--DASELKICEDTSKPKDES-DVKVDEQMLKSEDTSEGKVGQETGEN 526
Q S +E E D +E + ED + K+E D D + +S D ++ E G N
Sbjct: 25 QQPESSIEHQDDEEGDVNEAEDNEDEDEQKEEKEDEDGDTEAKQSSDNNDAANDNEEGGN 84
Query: 527 IAL----KALREAFEAVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSL 582
++ ++ E+ E PT + + + + D T ++ S
Sbjct: 85 LSEASTEESTEESAEETQTNPTEDKNNEQQQQDDDDAESENKVESNEHQDNTNSNDNSKQ 144
Query: 583 KSISGNSPAMQLAAKHCFILEDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINV-KEC 641
S S N MQ F + D P D + A SES E + D ++ D+++ +E
Sbjct: 145 DSNSDND--MQ------FDIPDAP-DAIDAA-SESEKQEPTNVDADDNQDKMDVDIPQET 194
Query: 642 NSASVLDERDLSNDHGDK---KIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKD 698
+ A + ++ + + +K K E EE +H + E N +N D + +
Sbjct: 195 SIAFTTNTQNTNTEEYEKEESKQELGEDEELKHIQEDDPSFDENYN-----SNNDPDKSN 249
Query: 699 EPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVE-KDNS 757
+ D + L N + + ++ S D+ S+ Q K P + E K NS
Sbjct: 250 DDFDTSALINGDD-FNMEIDDLDYSKDVESESNQQEGK---------PEEEEEEEQKKNS 299
Query: 758 LLSD---SLPSGKNEPDQRVLSNSVAE-PSPPSKLTNDVDMVSDPQPLENNEPEKQIXXX 813
LS+ ++ S ++ + + S E P+ T V S +PL +N Q
Sbjct: 300 ELSEVKSNVESTSDQKESEIKEESTGENPNESQPTTTSVVGASATEPLSSN----QNTSI 355
Query: 814 XXXXXXXXXAPKDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETK 873
KDV+M E+ EP+ + E +DQ + +DE + + K
Sbjct: 356 ASSEVKTNTTDKDVDMDQQQ--KEV-EPESKEKEEDEEDEE-DDQEEEDEDEPEEPPKEK 411
Query: 874 NDQY 877
QY
Sbjct: 412 -PQY 414
Score = 85 (35.0 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 13/70 (18%), Positives = 42/70 (60%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQERALIIQARL 962
EE ++ ++ +S++ ++ K+E KL E++ + R R+ + + ++ L+ +R + ++ +
Sbjct: 791 EEREMHKIGSSIVNHEISKIETKLDKVEELEKIYERERQNMLKQQEELFIDRISLTKSTI 850
Query: 963 GPSRVMQPSV 972
G + ++ ++
Sbjct: 851 GVIKKLEEAI 860
Score = 46 (21.3 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 552 AEVGNPVMALAAFLTLLGGPDLTTASARSSLKSI 585
+ + NPV+A F+T L ++ A++ ++ K++
Sbjct: 704 SSIDNPVLANLTFMTKLVDSNVAKAASEAAKKAM 737
Score = 43 (20.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 746 PAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPSK 787
P VDV+K L+++S S E Q +P PP +
Sbjct: 556 PVERVDVKKLQQLMNESSNSNSGEVKQE------KQPPPPQQ 591
>SGD|S000003712 [details] [associations]
symbol:SWI3 "Subunit of the SWI/SNF chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0003682
"chromatin binding" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IEA;IMP;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000436 "carbon
catabolite activation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0031496
"positive regulation of mating type switching" evidence=IMP]
[GO:0042393 "histone binding" evidence=IPI] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 SGD:S000003712 EMBL:BK006943
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0005987 GO:GO:0043044
GO:GO:0000436 EMBL:X56792 eggNOG:COG5259 OrthoDB:EOG4PZNGG
GeneTree:ENSGT00390000018166 GO:GO:0044109 GO:GO:0031496
EMBL:M84390 EMBL:Z49451 PIR:S26706 RefSeq:NP_012359.1 PDB:2FQ3
PDBsum:2FQ3 ProteinModelPortal:P32591 SMR:P32591 DIP:DIP-2471N
IntAct:P32591 MINT:MINT-563159 STRING:P32591 PaxDb:P32591
PeptideAtlas:P32591 EnsemblFungi:YJL176C GeneID:853264
KEGG:sce:YJL176C CYGD:YJL176c HOGENOM:HOG000142068 KO:K11772
OMA:ERISENC EvolutionaryTrace:P32591 NextBio:973526
Genevestigator:P32591 GermOnline:YJL176C Uniprot:P32591
Length = 825
Score = 168 (64.2 bits), Expect = 2.4e-17, Sum P(4) = 2.4e-17
Identities = 36/130 (27%), Positives = 67/130 (51%)
Query: 109 RDDSTFEAIEELNKASEEWAALEAKIEAD-FEAIRSRDSNVHVVPTHCGWFSWTKIHPLE 167
R++ E + + +K++ ++E + FE ++ + V+P++ WF+ KIH +E
Sbjct: 267 RNEQEREIMNDHSKSANPKKTTITRVEPETFEIPQAHEI---VIPSYSKWFNLEKIHSIE 323
Query: 168 EQALPAFFNGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVME 227
Q+LP FF + +TP++YM RN+++ + NP + G A + +
Sbjct: 324 VQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVSGDAAALFRLHK 383
Query: 228 FLDYWGLINF 237
FL WGLIN+
Sbjct: 384 FLTKWGLINY 393
Score = 100 (40.3 bits), Expect = 2.4e-17, Sum P(4) = 2.4e-17
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 379 WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDDDVDGN 436
W+ + + +W ++A++V K+ QCIL F+Q+PIED FL D + G+
Sbjct: 527 WSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPEQCILRFLQLPIEDKFLYGDGNGKGD 584
Score = 99 (39.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 57/274 (20%), Positives = 110/274 (40%)
Query: 608 DKKEVAHSESIVAEMADRDIQKDETLE-DINVKECNSASVLDERDLSNDHGDKKIEDSVP 666
D +++ + VA +A+ D +E+ + D ++K+ A+V + RD ++ + P
Sbjct: 23 DNNSDSNANAAVAGVANTDTAGEESQQQDESLKD--EATVPNTRDAESEAITVTAKQQ-P 79
Query: 667 EEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDL 726
+ + E PS + + A QD + D E S+ + + N PSI +N +
Sbjct: 80 TMQANKLDSQETPSTEESRAQNVFGQDNEDSDNLFGETE-SSVSNNEANTPSI--PTNPV 136
Query: 727 PSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPS 786
++ + + K D D + D + EP+ + V E S P
Sbjct: 137 DNENNKPAIKEDSTIQ--------DSNGDVKNMEDVKIQKEEEPENNTVIEGVKEESQPD 188
Query: 787 KLTNDVDMVS-----DPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEP 841
+ T ++D V D QP+ + P+ I V + +P + ++
Sbjct: 189 ENTKEMDEVEEDDEDDDQPMIS--PDNSIFGDTKSESKQLGNTSSVANTPSEIP-DAHKA 245
Query: 842 QQTDSITGTETARVEDQNRDGQDEKHDSKETKND 875
+Q D I TE+ V+ + G++ +E ND
Sbjct: 246 EQEDIIEKTES--VDKKVDSGEERNEQEREIMND 277
Score = 77 (32.2 bits), Expect = 2.4e-17, Sum P(4) = 2.4e-17
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 903 EEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
EE Q+ L LI Q++KL+AKL +++ R+ LER ++ L +R
Sbjct: 675 EERQMNFLTNELIRLQMEKLDAKLNHLKKLEKFMELERKTLERQQENLLIQR 726
Score = 47 (21.6 bits), Expect = 2.4e-17, Sum P(4) = 2.4e-17
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 540 GYVPTHETPQ-SFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKS 584
G P P F++ NPV++ AFL L P + + +++S
Sbjct: 588 GLGPLKYAPHLPFSKSENPVLSTIAFLVGLVNPKTVQSMTQRAIQS 633
>CGD|CAL0003837 [details] [associations]
symbol:orf19.7234 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0015616 "DNA
translocase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 CGD:CAL0003837 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACQ01000092 eggNOG:COG5259 KO:K11762
RefSeq:XP_715034.1 ProteinModelPortal:Q59ZV7 STRING:Q59ZV7
GeneID:3643306 KEGG:cal:CaO19.7234 Uniprot:Q59ZV7
Length = 561
Score = 159 (61.0 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 61/250 (24%), Positives = 106/250 (42%)
Query: 106 EAARDDSTFEAIEELNKASEEWAALEAKIEADFEAIRSR---DSNVHV-VPTHCGWFSWT 161
E+ +D+ ++ N + + +E K++ +F+ R + V VP+ WF +
Sbjct: 17 ESVTEDTPAPTTDDQNNQTPQVIDVE-KLQHEFQESAKRYLVEQTAQVIVPSFAKWFDLS 75
Query: 162 KIHPLEEQALPAFF--NGKSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGSL 219
KIH +E+++LP FF +G + D Y IR++I+ F NP + + + G +
Sbjct: 76 KIHDIEKKSLPDFFVEDGSGYKSSQD-YKYIRDFIVNTFRLNPKEYLTITAVRRNLSGDV 134
Query: 220 DARQEVMEFLDYWGLINFHPFPHVESSVANSDGDRMTXXXXXXXXKKGSLLEKLYRFEEI 279
+ +FL+ WGLIN+ P +SSV G + T L+ + E+
Sbjct: 135 TNIIRIHQFLEQWGLINYQIDPKTKSSVL---GPQYTGHFQITLDAPQGLVPFVPENAEL 191
Query: 280 -KAGPP-VAPMPSITFPAVPSGLFPESAIAEELAK---LEGPA---------VEYHCNSC 325
KA P V + +P+ E + E+ + G V Y C+ C
Sbjct: 192 TKATPSNVTKTDDLNNENIPTAKENELPLNLEIRRNVYATGEKKTNYKTNNIVHYSCSIC 251
Query: 326 SADCSRKRYH 335
D + RYH
Sbjct: 252 GKDTTEVRYH 261
Score = 140 (54.3 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 55/190 (28%), Positives = 85/190 (44%)
Query: 344 LCTDCFNNGKFGSDMSSSDFILMV---PGEA----------AGVSG-GKWTDQXXXXXXX 389
LC C++ G F S SSDFI + GE G+ G +
Sbjct: 282 LCEICYDQGLFPSSFHSSDFIQLKRTEEGEKWSEQEILLLLEGIEMFGTYEPPSSTGPVN 341
Query: 390 XXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDDDVDGNLKETTDDAPTNGD 449
W++I+EHVATKT+ QCI+ F+Q+PIED FL + N K+TT +
Sbjct: 342 VNANLNNQWDKISEHVATKTREQCIIKFIQLPIEDKFLT-KLIKEENEKDTTKSVVSQ-- 398
Query: 450 TSASKDVAEASESKTGAVE--GQTQTSPMETSKPEDASEL-KICEDTSKPKDESDVKVDE 506
S +D+A S T E Q ++ ++ E + + ++ E T + + K+DE
Sbjct: 399 -SLVQDIAAKLVSTTEGREFISQNAEENLKHAQLEQTNLVNQVIELTLEKFNLKLKKIDE 457
Query: 507 ---QMLKSED 513
+LK E+
Sbjct: 458 LQANLLKYEN 467
Score = 55 (24.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 906 QIRQ--LATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
Q+ Q L +IE L+K KL +E+ ++ QL R+++ ER
Sbjct: 430 QLEQTNLVNQVIELTLEKFNLKLKKIDELQANLLKYENQLNLERKQILLER 480
Score = 38 (18.4 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 647 LDERDLSNDHGDKKIEDSVPEEKRH 671
+DE ND K+ SV E K +
Sbjct: 532 VDESSNENDDNTSKLPVSVKEPKAY 556
>DICTYBASE|DDB_G0288285 [details] [associations]
symbol:mybX "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
dictyBase:DDB_G0288285 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GenomeReviews:CM000154_GR SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000109 RefSeq:XP_636792.1 HSSP:P32591
ProteinModelPortal:Q54J55 PRIDE:Q54J55 EnsemblProtists:DDB0220513
GeneID:8626549 KEGG:ddi:DDB_G0288285 eggNOG:COG5259 OMA:WDLINCF
Uniprot:Q54J55
Length = 1620
Score = 169 (64.5 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 65/267 (24%), Positives = 117/267 (43%)
Query: 297 PSGLFPESAIAEELAKLEGPAVEYHCNSCSADCSRKRYHCQKQAD-FD------------ 343
P L + ++L K + P E C C ADCS RY + D
Sbjct: 840 PKKLTTTKSANDQLIKKKKPLFE--CKKCKADCSNVRYQLVNNSTALDGNILPEYFYPMI 897
Query: 344 LCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQXXXXXXXXXXXYKENWNEIAE 403
+C +CF++G + + + SS F + + WTD +++NW EI++
Sbjct: 898 ICVNCFSSGNYENFIQSSSFQRIEQHQPEEFG---WTDIETLLLLEGIEIFRDNWQEISD 954
Query: 404 HVA-TKTKAQCILHFVQMPIEDMFLD--CDDDVDGNL--KETTDDAP---TNGDTSASKD 455
++ +KT QC+ HF+++PIED FL+ G+L KE + P T G +
Sbjct: 955 YIGGSKTPEQCLTHFIRLPIEDEFLERKISSFPVGSLSKKEIDSNNPFSITYGVNNPIMS 1014
Query: 456 V----AEASESKTGAVEGQTQTSPMET---SKPEDASELKICEDTSKPKDESDVKVDEQM 508
+ + S+ G + + +E K + S+ ++ E K KD+ + + E+
Sbjct: 1015 LVAFFSSYSQPPLGLLASKAAKVILEILNDPKYQQPSKEEL-ERIQKEKDDKEKEDKEKE 1073
Query: 509 LKSEDTSEGKVGQETG-ENIALKALRE 534
LK +++ E ++ ++ E K L+E
Sbjct: 1074 LKEKESKEKELKEKDDKEKEKEKELKE 1100
Score = 144 (55.7 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 67/340 (19%), Positives = 128/340 (37%)
Query: 554 VGNPVMALAAFLTLLGGPDLTTASARSSLKSISG-NSPAMQLAAKHCFILEDPPGDKKEV 612
V NP+M+L AF + P L +++++ + N P Q +K D KE
Sbjct: 1008 VNNPIMSLVAFFSSYSQPPLGLLASKAAKVILEILNDPKYQQPSKEELERIQKEKDDKEK 1067
Query: 613 AHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHA 672
E E+ +++ K++ L++ + KE L ER+ DK+ +D V +EK
Sbjct: 1068 EDKEK---ELKEKE-SKEKELKEKDDKEKEKEKELKEREDKEKEEDKEAKDKVDKEKEED 1123
Query: 673 ASLNEKPSE--KLNGATGPANQDTPEKDE-PGDLNELSNPKSPKDNQPSIVEESNDLPSK 729
+K E K EK+E D + K KD + ++E + K
Sbjct: 1124 KQKQDKEKEEDKEKQEKDKEEDKDKEKEENKEDKEKEGTDKEGKDKEDKEIKEDKEKEEK 1183
Query: 730 VLQS-SQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGK-NEPDQRVLSNSVAEPSPPSK 787
++ +++EK +S S + + + N+ D + + +
Sbjct: 1184 DKEAIGDHDKSDSTNTTTTKEMEIEKQDSSTSTNKETVEMNQDDHVKIDEKETKENDKKS 1243
Query: 788 LTNDVDMVSDPQPLENN------EPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEP 841
+T + + D NN E EK K+ + + E +
Sbjct: 1244 ITEEENQQKDDNDNNNNSHNHNKEIEKDDNKENENEKEKENENKNEKQIENENEKEKDLN 1303
Query: 842 QQTDSITGTETARVEDQ-NRDGQDEKHDSKETKNDQYIDK 880
++S + + ++ +Q + D Q+ K +S+ N Q K
Sbjct: 1304 NLSESQSSNDQSKSNEQMSSDNQESKENSESNSNTQITSK 1343
Score = 103 (41.3 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 52/271 (19%), Positives = 114/271 (42%)
Query: 608 DKKEVAHSES-IVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVP 666
D+KE ++ + E + + QKD+ D N N +++ D + +K+ E+
Sbjct: 1232 DEKETKENDKKSITE--EENQQKDDN--DNNNNSHNHNKEIEKDDNKENENEKEKENENK 1287
Query: 667 EEKRHAASLNEKPSEKLNGATGPANQDTPEKDEP-GDLNELSNPKSPKDNQPSIVEESND 725
EK+ + NEK + N + ++ D + +E N+ S S ++ I + +
Sbjct: 1288 NEKQ-IENENEKEKDLNNLSESQSSNDQSKSNEQMSSDNQESKENSESNSNTQITSKEQN 1346
Query: 726 LPSKVLQSSQKXXXXXXXXXPA--PPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPS 783
+ + S+K PA P + + N+ ++++ +N + +N E +
Sbjct: 1347 ITT---DQSEKPKETPTTTTPATLPATPISESNTTTTNTIVDKENNNE----TNKTNENN 1399
Query: 784 PPSKLTNDVDMVSDPQPLE----NNEPEKQIXXXXXXXXXXXXAPK-DVEMVSTSLPSEI 838
+ TN+ + ++ +E NNE +K + K DV+ + + + +
Sbjct: 1400 SNNNNTNEENKTAESNNMETVVENNE-KKPVDNDDNNNNNNNSNDKMDVDNKNNNNNNNV 1458
Query: 839 NEPQQTDSITGTETARVEDQNRDGQDEKHDS 869
++ ++ D E VE++ D DEK ++
Sbjct: 1459 DKNEK-DKDEENEMEEVEEEENDLNDEKKEN 1488
Score = 89 (36.4 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 54/270 (20%), Positives = 105/270 (38%)
Query: 608 DKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPE 667
DK++ + E E D++ KD+ ED +KE D+ + DH DK +
Sbjct: 1147 DKEKEENKEDKEKEGTDKE-GKDK--EDKEIKEDKEKEEKDKEAIG-DH-DKSDSTNTTT 1201
Query: 668 EKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLP 727
K + S N T NQD K + + E N K + + ++ ND
Sbjct: 1202 TKEMEIEKQDS-STSTNKETVEMNQDDHVKIDEKETKE--NDKKSITEEENQQKDDNDNN 1258
Query: 728 SKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPSK 787
+ +++ + EK+N ++ +NE ++ + + S ++ S
Sbjct: 1259 NNSHNHNKEIEKDDNKENEN---EKEKENENKNEKQIENENEKEKDLNNLSESQSSNDQS 1315
Query: 788 LTNDVDMVSDPQPL-ENNEPEKQIXXXXXXXXXXXX-APKDVEMVSTSLPSEINEPQQTD 845
+N+ M SD Q EN+E + K E +T+ P+ + ++
Sbjct: 1316 KSNE-QMSSDNQESKENSESNSNTQITSKEQNITTDQSEKPKETPTTTTPATLPATPISE 1374
Query: 846 SITGTETARVEDQNRDGQDEKHDSKETKND 875
S T T V+ +N + ++ +++ N+
Sbjct: 1375 SNTTTTNTIVDKENNNETNKTNENNSNNNN 1404
Score = 65 (27.9 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 24/109 (22%), Positives = 46/109 (42%)
Query: 432 DVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICE 491
D D ++ +D NG+ ++ E K E + + + E+ E + +
Sbjct: 682 DKDKENEKEKEDKTENGNEKENEKENEKENEKENEKENENEKENENEKENENKKEKE--K 739
Query: 492 DTSKPKDESDVKVDEQM-LKSEDTSEG-KVGQETGENIALKALREAFEA 538
+ K + + KVDE++ + E +E K+ +E E I K E E+
Sbjct: 740 ENKKENENENEKVDEKIEIDKEGINEDEKMDEEKEEKINNKKEDEEVES 788
Score = 63 (27.2 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 25/115 (21%), Positives = 41/115 (35%)
Query: 430 DDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI 489
D +GN KE + + K+ E++ + E K + K+
Sbjct: 693 DKTENGNEKENEKENEKENEKENEKENENEKENENEKENENKKEKEKENKKENENENEKV 752
Query: 490 CEDTSKPKD--ESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYV 542
E K+ D K+DE+ K E + K +E I L+E E G +
Sbjct: 753 DEKIEIDKEGINEDEKMDEE--KEEKINNKKEDEEVESEIKKDKLKENEEVEGEI 805
Score = 61 (26.5 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 178 KSQDRTPDIYMEIRNWIMKKFHSNPITQIELKDLSELEVGS------LDARQ--EVMEFL 229
K Q ++Y R++++ + NP + + D+ + ++ R ++ +FL
Sbjct: 345 KLQLSNKELYKIYRDYMITSYQKNPYQYLSVTDVKNHFINQNKKTFKVNIRSIIKIFDFL 404
Query: 230 DYWGLIN 236
+YW LIN
Sbjct: 405 EYWDLIN 411
Score = 57 (25.1 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 61/355 (17%), Positives = 138/355 (38%)
Query: 608 DKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDS--- 664
++KE +E+ + + + +K++ L +++ + ++ +S+D+ + K E+S
Sbjct: 1278 NEKE-KENENKNEKQIENENEKEKDLNNLSESQSSNDQSKSNEQMSSDNQESK-ENSESN 1335
Query: 665 -----VPEEKRHAASLNEKPSEKLNGATGPANQDTP-EKDEPGDLNEL----SNPKSPKD 714
+E+ +EKP E T TP + N + +N ++ K
Sbjct: 1336 SNTQITSKEQNITTDQSEKPKETPTTTTPATLPATPISESNTTTTNTIVDKENNNETNKT 1395
Query: 715 NQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRV 774
N+ + + + +K +S+ PVD + +N+ ++S + K + D +
Sbjct: 1396 NENNSNNNNTNEENKTAESNNMETVVENNEKK--PVDNDDNNNNNNNS--NDKMDVDNKN 1451
Query: 775 LSNS--VAEPSPPSKLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVST 832
+N+ V + N+++ V + + N+E ++ +DVEM +
Sbjct: 1452 NNNNNNVDKNEKDKDEENEMEEVEEEENDLNDEKKEN----GVDGVGEEDDDEDVEMETA 1507
Query: 833 SLPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQYIDKXXXXXXXXXXXX 892
S+ +I + + T T+T+ + K N +Y +
Sbjct: 1508 SV--DIRK----STTTTTKTSLLM---MSPPPPKKSRIPEPNPEYFSEAAIQAATAAAFE 1558
Query: 893 XXXXXXXXCQE--EDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLER 945
E E +IR L S++ Q++KLE F+ + + ++ E+
Sbjct: 1559 TIQNESKKYYELEEQEIRDLIRSIVICQIRKLELLWKFYVTYEQSLEKEKDYYEK 1613
Score = 53 (23.7 bits), Expect = 8.2e-14, Sum P(3) = 8.2e-14
Identities = 22/84 (26%), Positives = 35/84 (41%)
Query: 142 RSRDSNVHVVPTHC---GWF-SWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNWIMKK 197
RS ++ P C WF S IH +E LP FF +++ N
Sbjct: 258 RSFPIPTNITPPKCPLPNWFTSLDNIHQVEINNLPEFFQDDNENGNG-------NGNGSG 310
Query: 198 FHSNPITQIELKDLSELEVGSLDA 221
SN +T+I+ ++ E E +D+
Sbjct: 311 SGSNNMTEIDYDEIDEDEYSYVDS 334
>UNIPROTKB|I3LNI6 [details] [associations]
symbol:LOC100737447 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] InterPro:IPR017884 PROSITE:PS51293
GeneTree:ENSGT00390000018166 EMBL:CU929897
Ensembl:ENSSSCT00000023426 Uniprot:I3LNI6
Length = 301
Score = 130 (50.8 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 19/38 (50%), Positives = 33/38 (86%)
Query: 394 YKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDD 431
YK++WN+++EHV ++T+ +CILHF+++PIED +L+ D
Sbjct: 2 YKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSD 39
Score = 101 (40.6 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 41/184 (22%), Positives = 74/184 (40%)
Query: 765 SGKNEPDQRVLSNSVAEPSP--PSKL--TNDVDMVSDPQPLENNEPEKQIXXXXXXXXXX 820
SGK +P + S+ +A P P KL + M +D ++ +PEK
Sbjct: 112 SGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDA---DSQQPEKAENKGENETDEG 168
Query: 821 XXAPKDVEMVSTS---LPSEINEPQQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQY 877
A +D E S SE++E +++ E + D ++ + + K+ +++
Sbjct: 169 DKA-QDGENEKNSEKEQDSEVSEDTKSEEKESEENKELTDTCKERESDI-GKKKVEHEIS 226
Query: 878 IDKXXXXXXXXXXXXXXXXXXXXCQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTM 937
EE +I+ L L+E Q++KLE KL F E++ +
Sbjct: 227 EGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMD 286
Query: 938 RVRE 941
R +E
Sbjct: 287 REKE 290
Score = 93 (37.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 36/170 (21%), Positives = 80/170 (47%)
Query: 543 PTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISG--NSPAMQLAAKHCF 600
P P F++ GNPVM+ AFL + P + +A+A+++L+ S ++L H
Sbjct: 44 PLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVK 103
Query: 601 ILEDPPGDKKEVAHSESIVAE-MADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK 659
+++ +V + + + +A + E LE ++ + + + + + + G+
Sbjct: 104 KVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDADSQQPEKAENKGEN 163
Query: 660 KIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLN-ELSN 708
+ ++ +K NEK SEK + ++DT +++ + N EL++
Sbjct: 164 ETDEG---DKAQDGE-NEKNSEKEQDSE--VSEDTKSEEKESEENKELTD 207
Score = 54 (24.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 21/90 (23%), Positives = 34/90 (37%)
Query: 446 TNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVK-- 503
T+ D+ + E++T EG E + ++ EDT + ES+
Sbjct: 147 TDADSQQPEKAENKGENETD--EGDKAQDGENEKNSEKEQDSEVSEDTKSEEKESEENKE 204
Query: 504 -VDEQMLKSEDTSEGKVGQETGE-NIALKA 531
D + D + KV E E N+A A
Sbjct: 205 LTDTCKERESDIGKKKVEHEISEGNVATAA 234
Score = 50 (22.7 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 22/102 (21%), Positives = 40/102 (39%)
Query: 604 DPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIED 663
D P +K E A E + D D Q+ E E+ E + +D N+ +K +D
Sbjct: 132 DEP-EKLEGAEEEKMET---DADSQQPEKAENKGENETDEGD--KAQDGENEKNSEKEQD 185
Query: 664 SVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNE 705
S E + + +++L D +K +++E
Sbjct: 186 SEVSEDTKSEEKESEENKELTDTCKERESDIGKKKVEHEISE 227
Score = 49 (22.3 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 19/94 (20%), Positives = 40/94 (42%)
Query: 433 VDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICED 492
V+ ++K+ + A +G + + + + TG E + E DA + +
Sbjct: 98 VEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDADSQQPEKA 157
Query: 493 TSKPKDESDVKVDEQMLKSEDTSEGKVGQETGEN 526
+K ++E+D Q ++E SE + E E+
Sbjct: 158 ENKGENETDEGDKAQDGENEKNSEKEQDSEVSED 191
>UNIPROTKB|I3LJ29 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 Ensembl:ENSSSCT00000029308 OMA:EWNISEN
Uniprot:I3LJ29
Length = 532
Score = 186 (70.5 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 33/108 (30%), Positives = 62/108 (57%)
Query: 134 IEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNW 193
++A + + + +++ ++P++ WF + IH +E +ALP FFNGK++ +TP+IY+ RN+
Sbjct: 326 VDAGEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNF 384
Query: 194 IMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFP 241
++ + NP + G + A V FL+ WGL+N+ P
Sbjct: 385 MIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDP 432
>UNIPROTKB|F1SLI6 [details] [associations]
symbol:LOC100626030 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 EMBL:CU633694 EMBL:CU929897
Ensembl:ENSSSCT00000012417 Uniprot:F1SLI6
Length = 1024
Score = 186 (70.5 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 33/108 (30%), Positives = 62/108 (57%)
Query: 134 IEADFEAIRSRDSNVHVVPTHCGWFSWTKIHPLEEQALPAFFNGKSQDRTPDIYMEIRNW 193
++A + + + +++ ++P++ WF + IH +E +ALP FFNGK++ +TP+IY+ RN+
Sbjct: 437 VDAGEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNF 495
Query: 194 IMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFP 241
++ + NP + G + A V FL+ WGL+N+ P
Sbjct: 496 MIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDP 543
Score = 59 (25.8 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 915 IEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQER 954
I+ + QK + K +F + + R QLE+ RQ+L ER
Sbjct: 908 IQTKRQKTKKKKKYFINVPTIRKRQSLQLEQQRQQLLTER 947
Score = 37 (18.1 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 482 EDASELKICEDTSKPKDESDVKVD--EQMLKSEDTSEGKVGQETGENIALKALR 533
E+ SE+K + T K K + + D + LK+ GK+ E + + + +R
Sbjct: 826 EEKSEVK--KGTKKKKKKKKARRDLTDTYLKNRKKDTGKMYVE--QEVVIHQIR 875
>FB|FBgn0037836 [details] [associations]
symbol:CG14692 species:7227 "Drosophila melanogaster"
[GO:0008603 "cAMP-dependent protein kinase regulator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0032027 "myosin light chain binding" evidence=RCA]
InterPro:IPR000048 InterPro:IPR003117 Pfam:PF00612 Pfam:PF02197
PROSITE:PS50096 SMART:SM00015 SMART:SM00394 EMBL:AE014297
GO:GO:0007165 GO:GO:0008603 eggNOG:NOG12793 SUPFAM:SSF47391
RefSeq:NP_650019.4 ProteinModelPortal:Q9VGW4 SMR:Q9VGW4
IntAct:Q9VGW4 MINT:MINT-328162 GeneID:41298 KEGG:dme:Dmel_CG14692
UCSC:CG14692-RB FlyBase:FBgn0037836 InParanoid:Q9VGW4
OrthoDB:EOG4B8GTZ GenomeRNAi:41298 NextBio:823185 Bgee:Q9VGW4
Uniprot:Q9VGW4
Length = 2743
Score = 164 (62.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 103/459 (22%), Positives = 179/459 (38%)
Query: 446 TNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPE-DASELKICEDTSKPKDESDVKV 504
++GD S + + E++ + +E K E + +LK + S+ K S K
Sbjct: 973 SSGDISIRESETKHVENREEMASTNLDSDQVENMKLEGEIGQLKTVFEQSEEKT-SPTK- 1030
Query: 505 DEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEVGNPVMALAAF 564
+ L +ED K+ ++ E++ + + +P+ E S + NP+ +
Sbjct: 1031 -SESLHAEDR---KISGKSKESLEDAGENDRSTLLENLPSSEKENSTSLDENPLPEKES- 1085
Query: 565 LTLLGGPDLTTASARS-SLKSISGNSPAMQLAAK------HCFILEDPPGDKKEVAHSES 617
+L P T + S KS S + L K L++ P +KE +S S
Sbjct: 1086 TSLDEKPSSGTEKSTSLDEKSSSEKEKSTSLDEKPSSEKEKSTSLDETPSSEKE--NSTS 1143
Query: 618 IVAEMADRDIQKDET-LEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLN 676
+ + + +K+ T L++ ++ LDE+ S +++ EK + SLN
Sbjct: 1144 LDEKPSP---EKESTSLDEKPSSGTEKSTSLDEKSSSEKEKSTSLDEKPSSEKEKSTSLN 1200
Query: 677 EKPSEKLNGATGPANQDTPEK-----DE-PGDLNELS-----NPKSPKDNQPSIVEE-SN 724
E+PS + +T +PEK DE P E S NP S K+ S+ E S+
Sbjct: 1201 ERPSSEKENSTSLVENPSPEKESTSLDEKPSSGTEKSTSLDENPSSEKEKSTSLNERPSS 1260
Query: 725 DLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSP 784
+ + Q + EK+ S D PS + E + N +E
Sbjct: 1261 EKENSTSQDEKPSSETEKSTSLDEKPSSEKEKSTSLDGKPSSEKEKSTSLDENPSSEKEK 1320
Query: 785 PSKLTN--DVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSE-INEP 841
+ L + + +EN PEK+ P STSL +E
Sbjct: 1321 STSLNERPSSEKENSTSLVENPSPEKE-------STSLDEKPSSGTEKSTSLDENPSSEK 1373
Query: 842 QQTDSITGTETARVEDQNRDGQDEKHDSKETKNDQYIDK 880
+++ S+ E E +N QDEK S++ K+ +DK
Sbjct: 1374 EKSTSLN--ERPSSEKENSTSQDEKPSSEKEKST-LLDK 1409
Score = 160 (61.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 98/444 (22%), Positives = 164/444 (36%)
Query: 602 LEDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKI 661
L++ P +KE + S + E + + +L++ E S S LDE+ S +
Sbjct: 1116 LDEKPSSEKEKSTS---LDETPSSEKENSTSLDEKPSPEKESTS-LDEKPSSGTEKSTSL 1171
Query: 662 EDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPK---DNQPS 718
++ EK + SL+EKPS + +T + + EK+ L E +P+ D +PS
Sbjct: 1172 DEKSSSEKEKSTSLDEKPSSEKEKSTSLNERPSSEKENSTSLVENPSPEKESTSLDEKPS 1231
Query: 719 I-VEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSN 777
E+S L SS+K P+ EK+NS D PS + E S
Sbjct: 1232 SGTEKSTSLDEN--PSSEKEKSTSLNERPSS----EKENSTSQDEKPSSETEK-----ST 1280
Query: 778 SVAE-PSPPSKLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSL-- 834
S+ E PS + + +D + ++ ++ P + STSL
Sbjct: 1281 SLDEKPSSEKEKSTSLDGKPSSEKEKSTSLDENPSSEKEKSTSLNERPSSEKENSTSLVE 1340
Query: 835 -PSEINEPQQTDS--ITGTETARVEDQNRDGQDEKHDSKETKNDQYIDKXXXXXXXXXXX 891
PS E D +GTE + D+N + EK S + +K
Sbjct: 1341 NPSPEKESTSLDEKPSSGTEKSTSLDENPSSEKEKSTSLNERPSS--EKENSTSQDEKPS 1398
Query: 892 XXXXXXXXXCQEEDQIRQL--ATSLIEKQLQKLEAKLAFFNEMD-NVTMRVREQLER--S 946
+ D +R L + +++++ K +A +A + D N V LE+ S
Sbjct: 1399 SEKEKSTLLDKNTDLMRDLIQVSQKVDEEMSKGKAAIAVVDLPDINKGESVNSPLEKKPS 1458
Query: 947 RQRLYQERALIIQARLGPSRVMQPSVPANRNPMTFANSVAXXXXXXXXXXXXXXXXXVPQ 1006
Q L IQA L + + P N ++ +
Sbjct: 1459 SQELED-----IQAELSTDK--ETGEPYN---LSAEKHKVEPISKKTIETTDVVDVGLKG 1508
Query: 1007 SSTPSNPFGSTTTAGSSIRPSSQD 1030
+ PS P + T A S+ P +D
Sbjct: 1509 NDDPSKPGKTETAATKSVSPDIKD 1532
Score = 155 (59.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 82/346 (23%), Positives = 142/346 (41%)
Query: 438 KETT--DDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSK 495
KE+T D+ P++G T S + E S S+ E T +S+ E ++ L ++T
Sbjct: 1083 KESTSLDEKPSSG-TEKSTSLDEKSSSEK---EKSTSLDEKPSSEKEKSTSL---DETPS 1135
Query: 496 PKDESDVKVDEQML-KSEDTS-EGKVGQETGENIAL----KALREAFEAVGYVPTHETPQ 549
+ E+ +DE+ + E TS + K T ++ +L + +E ++ P+ E +
Sbjct: 1136 SEKENSTSLDEKPSPEKESTSLDEKPSSGTEKSTSLDEKSSSEKEKSTSLDEKPSSEKEK 1195
Query: 550 SFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQL------AAKHCFILE 603
S + P +L+ P S K SG + L + L
Sbjct: 1196 STSLNERPSSEKENSTSLVENPSPEKESTSLDEKPSSGTEKSTSLDENPSSEKEKSTSLN 1255
Query: 604 DPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIED 663
+ P +KE + S+ E + +K +L++ E ++ LD + S +++
Sbjct: 1256 ERPSSEKENSTSQD---EKPSSETEKSTSLDEKPSSEKEKSTSLDGKPSSEKEKSTSLDE 1312
Query: 664 SVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEES 723
+ EK + SLNE+PS + +T +PEK E L+E P S + S+ E
Sbjct: 1313 NPSSEKEKSTSLNERPSSEKENSTSLVENPSPEK-ESTSLDE--KPSSGTEKSTSLDEN- 1368
Query: 724 NDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNE 769
PS S+K P+ EK+NS D PS + E
Sbjct: 1369 ---PS-----SEKEKSTSLNERPSS----EKENSTSQDEKPSSEKE 1402
Score = 133 (51.9 bits), Expect = 0.00033, P = 0.00033
Identities = 93/436 (21%), Positives = 171/436 (39%)
Query: 438 KETT--DDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSK 495
KE+T D+ P++G T S + E S S+ E T +S+ E ++ L E S
Sbjct: 1152 KESTSLDEKPSSG-TEKSTSLDEKSSSEK---EKSTSLDEKPSSEKEKSTSLN--ERPSS 1205
Query: 496 PKDESDVKVDEQMLKSEDTS-EGKVGQETGENIAL----KALREAFEAVGYVPTHETPQS 550
K+ S V+ + E TS + K T ++ +L + +E ++ P+ E S
Sbjct: 1206 EKENSTSLVENPSPEKESTSLDEKPSSGTEKSTSLDENPSSEKEKSTSLNERPSSEKENS 1265
Query: 551 FAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKK 610
++ P +L D +S + S+ G P+ + + L++ P +K
Sbjct: 1266 TSQDEKPSSETEKSTSL----DEKPSSEKEKSTSLDGK-PSSE--KEKSTSLDENPSSEK 1318
Query: 611 EVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKR 670
E + S + E + + +L + E S S LDE+ S ++++ EK
Sbjct: 1319 EKSTS---LNERPSSEKENSTSLVENPSPEKESTS-LDEKPSSGTEKSTSLDENPSSEKE 1374
Query: 671 HAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKV 730
+ SLNE+PS + +T + + EK++ L++ ++ V+E K
Sbjct: 1375 KSTSLNERPSSEKENSTSQDEKPSSEKEKSTLLDKNTDLMRDLIQVSQKVDEEMS-KGKA 1433
Query: 731 LQSSQKXXXXXXXXXPAPPVDVEKDNSLLSD---SLPSGKNEPDQRVLSNSVAEPSPPSK 787
+ P++ + + L D L + K + LS + P SK
Sbjct: 1434 AIAVVDLPDINKGESVNSPLEKKPSSQELEDIQAELSTDKETGEPYNLSAEKHKVEPISK 1493
Query: 788 LTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEPQQTDSI 847
T + V D N++P K KD + + P + + PQ+++ I
Sbjct: 1494 KTIETTDVVDVGLKGNDDPSKPGKTETAATKSVSPDIKDKDTLKLK-PDD-DSPQKSEVI 1551
Query: 848 TGT-ETARVEDQNRDG 862
T + + N DG
Sbjct: 1552 TAELQLKSFKTPNDDG 1567
>TAIR|locus:2137544 [details] [associations]
symbol:AT4G37820 "AT4G37820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0005768 "endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
GO:GO:0005794 EMBL:CP002687 EMBL:AL035709 EMBL:AL161592
GO:GO:0005768 GO:GO:0005802 UniGene:At.2877 EMBL:AK117758
IPI:IPI00537218 PIR:T06029 RefSeq:NP_195495.1 UniGene:At.31227
PRIDE:Q9T069 EnsemblPlants:AT4G37820.1 GeneID:829938
KEGG:ath:AT4G37820 TAIR:At4g37820 HOGENOM:HOG000210060
InParanoid:Q9T069 OMA:EPQATEE ArrayExpress:Q9T069
Genevestigator:Q9T069 Uniprot:Q9T069
Length = 532
Score = 143 (55.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 85/401 (21%), Positives = 154/401 (38%)
Query: 491 EDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQS 550
E+T KDE + DE+ K+E + +E G+ I + E +AV E +
Sbjct: 74 EETKDVKDEVE---DEEGSKNEGGGDVSTDKENGDEIVEREEEE--KAVEENNEKEAEGT 128
Query: 551 FAEVGNPVMALAAFLTLL----GGPDLTTASARS-SLKSISGNSPAMQLAAKHCFILEDP 605
E GN ++ GG +++ AR + K +S M + +
Sbjct: 129 GNEEGNEDSNNGESEKVVDESEGGNEISNEEAREINYKGDDASSEVMHGTEEKSNEKVEV 188
Query: 606 PGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSV 665
G+ K ++S V+ D K+E LE +KE + + + D K DS
Sbjct: 189 EGESK--SNSTENVSVHEDESGPKNEVLEGSVIKEVSLNTTENGSDDGEQQETKSELDSK 246
Query: 666 PEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVE-ESN 724
EK + S E P L+ + ++ DE G + + + K+ + + +S+
Sbjct: 247 TGEKGFSDSNGELPETNLSTSNATETTESSGSDESGSSGKSTGYQQTKNEEDEKEKVQSS 306
Query: 725 DLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNE-PDQRVLSNSVA-EP 782
+ SKV +S + + E+ S S GK E P++R +S + E
Sbjct: 307 EEESKVKESGKNEKDASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEE 366
Query: 783 SPPSKLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVST-SLPSE-INE 840
S + N S Q EN E +I K+ E S+ S E N
Sbjct: 367 SKEEEPENKEKEASSSQE-ENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKENTNS 425
Query: 841 PQQTDSITGTETARVE--DQNRDGQDEKHDSKETKNDQYID 879
++ + + T+++ + D+ + + ++ +T N + D
Sbjct: 426 EKKIEQVESTDSSNTQKGDEQKTDESKRESGNDTSNKETED 466
>SGD|S000002856 [details] [associations]
symbol:ADA2 "Transcription coactivator" species:4932
"Saccharomyces cerevisiae" [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IDA]
[GO:0035066 "positive regulation of histone acetylation"
evidence=IMP] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0001786 "phosphatidylserine binding"
evidence=IMP;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0003713 "transcription
coactivator activity" evidence=IDA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0003682 "chromatin binding"
evidence=IEA;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0046695 "SLIK (SAGA-like) complex" evidence=IDA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 SGD:S000002856 EMBL:U33007 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016573 EMBL:BK006938
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0003713 eggNOG:COG5114 HOGENOM:HOG000163455
KO:K11314 OrthoDB:EOG441TKV GO:GO:0000124 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 EMBL:M95396
PIR:A43252 RefSeq:NP_010736.3 RefSeq:NP_010740.3 PDB:2ELJ
PDBsum:2ELJ ProteinModelPortal:Q02336 SMR:Q02336 DIP:DIP-183N
IntAct:Q02336 MINT:MINT-403023 STRING:Q02336 PaxDb:Q02336
PeptideAtlas:Q02336 EnsemblFungi:YDR448W GeneID:852059
GeneID:852063 KEGG:sce:YDR448W KEGG:sce:YDR452W CYGD:YDR448w
GeneTree:ENSGT00530000063657 KO:K06018 OMA:GRSPSHI
EvolutionaryTrace:Q02336 NextBio:970331 Genevestigator:Q02336
GermOnline:YDR448W GO:GO:0005671 GO:GO:0046695 GO:GO:0001786
GO:GO:0000183 GO:GO:0006348 GO:GO:0035066 Uniprot:Q02336
Length = 434
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/128 (24%), Positives = 59/128 (46%)
Query: 319 EYHCNSCSADCS-RKRYHCQKQADFDLCTDCFNNGKF-GSDMSSSDFILMVPGEAAGVSG 376
++HC+ CSADC+ R R C ++DLC CF+ G + G D+ + + + +
Sbjct: 4 KFHCDVCSADCTNRVRVSCAICPEYDLCVPCFSQGSYTGKHRPYHDYRI-IETNSYPILC 62
Query: 377 GKW-TDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDDDVDG 435
W D+ NW +IA+H+ ++ K + H+++ +E + D +
Sbjct: 63 PDWGADEELQLIKGAQTLGLGNWQDIADHIGSRGKEEVKEHYLKYYLESKYYPIPD-ITQ 121
Query: 436 NLKETTDD 443
N+ D+
Sbjct: 122 NIHVPQDE 129
>FB|FBgn0039257 [details] [associations]
symbol:tnc "tenectin" species:7227 "Drosophila melanogaster"
[GO:0007472 "wing disc morphogenesis" evidence=IMP] [GO:0005178
"integrin binding" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISM;IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISM] [GO:0048803 "imaginal disc-derived male
genitalia morphogenesis" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0060562
"epithelial tube morphogenesis" evidence=IMP] [GO:0005615
"extracellular space" evidence=IDA] [GO:0035296 "regulation of tube
diameter" evidence=IMP] [GO:0048619 "embryonic hindgut
morphogenesis" evidence=IMP] InterPro:IPR001007 PROSITE:PS50184
SMART:SM00214 EMBL:AE014297 GO:GO:0005615 GO:GO:0031012
GO:GO:0007476 GO:GO:0048619 GO:GO:0005201 GO:GO:0048803
GO:GO:0060562 CTD:3371 RefSeq:NP_001247300.1 RefSeq:NP_651318.3
UniGene:Dm.16515 ProteinModelPortal:Q9VC00 SMR:Q9VC00 GeneID:42990
KEGG:dme:Dmel_CG13648 UCSC:CG13648-RA FlyBase:FBgn0039257
InParanoid:Q9VC00 OrthoDB:EOG46M911 PhylomeDB:Q9VC00 NextBio:831685
ArrayExpress:Q9VC00 GO:GO:0035296 Uniprot:Q9VC00
Length = 2788
Score = 146 (56.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 104/465 (22%), Positives = 175/465 (37%)
Query: 430 DDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI 489
D+++D LK TT APT G TSAS++ E E K+ E T +E +KP ++SE
Sbjct: 556 DEELD--LKPTT--APTAGATSASEESEEQDEGKS--TEAPTSVDDIEPAKPTESSEEAS 609
Query: 490 CE--DTSK---PKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPT 544
E D +K P E+ + +E+++K T G+ E E I +K A E+
Sbjct: 610 GEGEDVAKETTPAGEASIAGEEEIVKGT-TPAGEPSSEGDEEI-VKGTTPAEESSSE-SE 666
Query: 545 HETPQSFAEVGNPVMA----LAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCF 600
E + G P +A +A T G P + + + +G S +A +
Sbjct: 667 DELTKVTTPAGEPSVAGEEEIAKETTPAGEPSIAGEEEIVKVTTPAGES---SIAGEEEI 723
Query: 601 ILEDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDK- 659
+ P + E I+ E E+I VKE A +S D
Sbjct: 724 VKVTTPAGESSSEGEEEIIKVTTPAGESSSEGDEEI-VKESTPAG----EPISEGEEDVI 778
Query: 660 KIEDSVP----EEKRHAASLNEKPSEKLNGATGPANQDTPEKDEP------------GDL 703
K S P E + + E P+E++ P ++EP G+
Sbjct: 779 KATTSAPKSDIEGVKEPETATEVPAEEVEDFAKPTTPIAEAEEEPIAGTPIPTDGISGE- 837
Query: 704 NELSNPKSPK--DNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSD 761
E+ +P+ + QP I EES ++P + + V+ S +
Sbjct: 838 EEIVKGTTPQTLEEQPEISEESTEVP---VAEDDLSSSTSASAIASSTEGVQDAASETTS 894
Query: 762 SLPSGKNEPDQRVLSNSVAEPSPPSKLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXX 821
S P+ + D+ A P ++ +D ++ D L P + +
Sbjct: 895 SAPARAGDKDE------AATTVPTAQDKDDEEVEQDATDL----PVEDVVQSTTAKTTTT 944
Query: 822 XAPKDVEMVSTSLPSEINEPQQTDSITGTETARVEDQNRDGQDEK 866
PK+ E + + +EI E + E E ++D +DE+
Sbjct: 945 EQPKE-ESSTEAEDAEI-EVTTSSPADKQEVPEAEPADKDHKDEE 987
>TAIR|locus:2130609 [details] [associations]
symbol:ADA2B "homolog of yeast ADA2 2B" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009631 "cold
acclimation" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009735 GO:GO:0009733 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0003682
GO:GO:0009631 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0003713 EMBL:Z97341 EMBL:AL161544 eggNOG:COG5114
HOGENOM:HOG000163455 KO:K11314 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 OMA:EECESHY
EMBL:AF338770 EMBL:AY143911 EMBL:AY050348 EMBL:BX827435
EMBL:BX827480 IPI:IPI00517802 IPI:IPI00519999 IPI:IPI00537530
PIR:H71430 RefSeq:NP_567495.1 RefSeq:NP_974560.1 RefSeq:NP_974561.1
UniGene:At.4412 UniGene:At.71096 UniGene:At.72978 HSSP:O75478
ProteinModelPortal:Q9ATB4 SMR:Q9ATB4 IntAct:Q9ATB4 STRING:Q9ATB4
PaxDb:Q9ATB4 PRIDE:Q9ATB4 EnsemblPlants:AT4G16420.1 GeneID:827336
KEGG:ath:AT4G16420 TAIR:At4g16420 InParanoid:Q9ATB4
PhylomeDB:Q9ATB4 ProtClustDB:CLSN2689459 Genevestigator:Q9ATB4
Uniprot:Q9ATB4
Length = 487
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 64/237 (27%), Positives = 99/237 (41%)
Query: 319 EYHCNSCSADCSRK-RYHCQKQADFDLCTDCFNNGKFGSDMS--SSDFILMVPGEAA-GV 374
+Y+C+ C D + K R C DFDLC +C + G++++ D V G +
Sbjct: 44 KYNCDYCQKDITGKIRIKCAVCPDFDLCIECMS---VGAEITPHKCDHPYRVMGNLTFPL 100
Query: 375 SGGKWTDQXXXXXXXXXXXYK-ENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDD-- 431
W+ Y NW E+AEHV TK+K QC+ H+ + + F D
Sbjct: 101 ICPDWSADDEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQCLEHYRNIYLNSPFFPLPDMS 160
Query: 432 DVDG-NLKETTDDAPTN-GDTSASKDVAEA---SESKTGAVEGQTQTSPMETS----KPE 482
V G N KE A D A +++ E S K VE + S ++ S KP
Sbjct: 161 HVAGKNRKELQAMAKGRIDDKKAEQNMKEEYPFSPPKV-KVEDTQKESFVDRSFGGKKPV 219
Query: 483 DAS---ELKICEDTSKPKDESDVKVD---EQMLKSEDTSEGKVGQETGENIALKALR 533
S L + ++ ++E D + D EQ+L + E +E + L+ LR
Sbjct: 220 STSVNNSLVELSNYNQKREEFDPEYDNDAEQLLAEMEFKENDTPEE--HELKLRVLR 274
>DICTYBASE|DDB_G0295719 [details] [associations]
symbol:DDB_G0295719 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0295719 EMBL:AAFI02000070 KO:K10867
RefSeq:XP_002649141.1 EnsemblProtists:DDB0252814 GeneID:8624735
KEGG:ddi:DDB_G0295719 OMA:ILITSEF Uniprot:C7G031
Length = 616
Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 93/471 (19%), Positives = 158/471 (33%)
Query: 419 QMPIEDMFLDCDDDVDGNLKETTDDAPTNGDTSASKDVAEASES--KTGAVEGQTQTSPM 476
Q P E V+ + + P + + AE++E+ ++ A E Q
Sbjct: 85 QAPTESTEAPTQSSVEQPAPTESTETPAQSSAAEQQAPAESTEAPAQSSAAEQQAPAEST 144
Query: 477 ETSKPEDASELKI-CEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREA 535
E A+E + E T P S EQ +E T E E A EA
Sbjct: 145 EAPAQSSAAEQQAPAESTEAPAQSSAA---EQQAPAEST-EAPAQSSAAEQQAPAESTEA 200
Query: 536 FEAVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGP-DLTTASARSSLKSISGNSPAMQL 594
A + P E P + AA + +++A + S +PA
Sbjct: 201 -PAQSSAAEQQAPAESNEA--PAQSSAAEQSAESNEAPAQSSAAEQQAPAESNEAPAQSS 257
Query: 595 AAKHCFILEDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSN 654
AA E P + A S S V + E E + + + +
Sbjct: 258 AA------EQPAESNEAPAQSSSTVEQPPAESSAAPEATE-VPAESAEQPTESSNAEQQQ 310
Query: 655 DHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEP----GDLN--ELSN 708
+ + S EE++ ++P++ T Q T E P G+ E SN
Sbjct: 311 TDSQQPTQSS-GEEQQQPTDSQQQPTDSQQQTTDSQQQQTSESSNPTQSSGEQQPTESSN 369
Query: 709 PKSPKDNQPSIVEESN--DLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSG 766
+ P D+Q E S+ + QS ++ A P + + +S P+
Sbjct: 370 AEQPTDSQQPPAESSSAPEATESPEQSGEEQPTESQQETSASPTEENQTSSTEEQQQPA- 428
Query: 767 KNEPDQRVLSNSVAEPSPPSKLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKD 826
D AE S S+ T++ S+ QP E++ AP +
Sbjct: 429 ----DSTASVEQPAETSS-SQQTSEAPAQSNEQPTESSASSNPTESSSATPTESSTAPTE 483
Query: 827 VEMV---STSLPSEINEPQQTDSITGTETAR-VEDQNRDGQDEKHDSKETK 873
S++ SE +E +G + + +E + +E +S+ET+
Sbjct: 484 SSATPAESSTATSESSEETVVKPASGEDGSEAIESGETETSEESIESEETE 534
Score = 125 (49.1 bits), Expect = 0.00041, P = 0.00041
Identities = 88/447 (19%), Positives = 153/447 (34%)
Query: 444 APTNG-DTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSK---PKDE 499
APT +T A AE ++ + E Q+S E P +++E ++ P +
Sbjct: 103 APTESTETPAQSSAAE-QQAPAESTEAPAQSSAAEQQAPAESTEAPAQSSAAEQQAPAES 161
Query: 500 SDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEVGN-PV 558
++ + + +E +A E+ EA E Q+ AE P
Sbjct: 162 TEAPAQSSAAEQQAPAESTEAPAQSSAAEQQAPAESTEAPAQSSAAEQ-QAPAESNEAPA 220
Query: 559 MALAAFLTLLGGP-DLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEVAHSES 617
+ AA + +++A + S +PA AA E P + A S S
Sbjct: 221 QSSAAEQSAESNEAPAQSSAAEQQAPAESNEAPAQSSAA------EQPAESNEAPAQSSS 274
Query: 618 IVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNE 677
V + E E + + + + + + S EE++ +
Sbjct: 275 TVEQPPAESSAAPEATE-VPAESAEQPTESSNAEQQQTDSQQPTQSS-GEEQQQPTDSQQ 332
Query: 678 KPSEKLNGATGPANQDTPEKDEP----GDLN--ELSNPKSPKDNQPSIVEESN--DLPSK 729
+P++ T Q T E P G+ E SN + P D+Q E S+ +
Sbjct: 333 QPTDSQQQTTDSQQQQTSESSNPTQSSGEQQPTESSNAEQPTDSQQPPAESSSAPEATES 392
Query: 730 VLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPSKLT 789
QS ++ A P + + +S P+ D AE S S+ T
Sbjct: 393 PEQSGEEQPTESQQETSASPTEENQTSSTEEQQQPA-----DSTASVEQPAETSS-SQQT 446
Query: 790 NDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEPQQTDSITG 849
++ S+ QP E++ AP + S++ P+E + S
Sbjct: 447 SEAPAQSNEQPTESSASSNPTESSSATPTESSTAPTE----SSATPAESSTATSESS--- 499
Query: 850 TETARVEDQNRDGQDEKHDSKETKNDQ 876
ET DG E +S ET+ +
Sbjct: 500 EETVVKPASGEDGS-EAIESGETETSE 525
>POMBASE|SPCC24B10.08c [details] [associations]
symbol:ada2 "SAGA complex subunit Ada2" species:4896
"Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=NAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=EXP;IMP] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IC] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010520 "regulation of reciprocal meiotic
recombination" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IMP]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 PomBase:SPCC24B10.08c GO:GO:0007126 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016573 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000790
GO:GO:0003713 GO:GO:0006310 PIR:T50415 RefSeq:NP_588011.1 PDB:2ELK
PDBsum:2ELK ProteinModelPortal:Q9P7J7 SMR:Q9P7J7 STRING:Q9P7J7
EnsemblFungi:SPCC24B10.08c.1 GeneID:2539174 KEGG:spo:SPCC24B10.08c
eggNOG:COG5114 HOGENOM:HOG000163455 KO:K11314 OMA:DRSVGEK
OrthoDB:EOG441TKV EvolutionaryTrace:Q9P7J7 NextBio:20800345
GO:GO:0000124 GO:GO:0071470 GO:GO:0010520 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 Uniprot:Q9P7J7
Length = 437
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 316 PAVEYHCNSCSADCSRKRY-HCQKQADFDLCTDCFNNG-KFGSDMSSSDFILMVPGEAAG 373
P +YHCN C+ D +R + C + DFDLC CF +G G+ S + + + +
Sbjct: 2 PPQKYHCNVCAQDITRSIHIRCVECVDFDLCIPCFTSGASLGTHHPSHPYRI-IETNSYP 60
Query: 374 VSGGKW-TDQXXXXXXXXXXXYKENWNEIAEHVAT-KTKAQCILHFVQMPIEDMFLDC 429
+ W D+ NW +IA++V +TK +C H+++ IE DC
Sbjct: 61 IFDENWGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTYIES---DC 115
>ZFIN|ZDB-GENE-090313-297 [details] [associations]
symbol:si:dkey-27m7.4 "si:dkey-27m7.4" species:7955
"Danio rerio" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 ZFIN:ZDB-GENE-090313-297 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 PANTHER:PTHR23239 Pfam:PF00038
GeneTree:ENSGT00560000076873 EMBL:BX470214 IPI:IPI00495678
Ensembl:ENSDART00000057913 Uniprot:F1Q5R6
Length = 1128
Score = 136 (52.9 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 90/453 (19%), Positives = 171/453 (37%)
Query: 436 NLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSK 495
++K DD + K ++ + + +G +T P+ET+K ++ + + K
Sbjct: 689 DVKTEKDDGIKSNKAEKEKVEEQSKKQEDSKTDGNVETVPIETTKEKETEKKQEDIPKEK 748
Query: 496 PKDESDVKVDEQ---MLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSF- 551
K E D K D + +D + K ++T +++ A ++ ++ +
Sbjct: 749 SKTEKDDKSDSAGNANTEKDDRAAPKETEKTQQDLPKVAEGKSQPEKLQEKQEDSKSDYV 808
Query: 552 -AEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKK 610
AE+ P L + T +S + S + A K LE +
Sbjct: 809 KAELAKPKETEKTQEDLPKAAEEKTQPEKSQTQENSKSDSAGSTKTKK---LESDA--TR 863
Query: 611 EVAHSESIVAEMADRDIQ--KDETLEDINVKECNSASVLD-ERDLSNDHGDKKIEDSVPE 667
E ++ + + A+ Q K +T E+ SA E D + + G K ++++P+
Sbjct: 864 ETGKTQEDLPKAAEEKTQPEKSQTQENSKSDSAGSAKTKKLESDATKETG--KTQENLPK 921
Query: 668 EKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLP 727
S EKP ++ N + + E +P + + S K +P + E +++
Sbjct: 922 VTEEK-SQPEKPQKQENNKSDAVKPENIEHPKPTETKDNS-----KGMEPKLEEVKSEIK 975
Query: 728 SKVLQSSQKXXXXXXXXXPAPPVDVE----KDNSLLSDSLPSGKNEPDQ-RVLSNSVAEP 782
+S PA P + E K++S + S K D+ + +V E
Sbjct: 976 DDA-KSDSVDINKTETTKPAIPKETEEKRKKEDSESVSAAESVKTSKDEAKTKEKAVDET 1034
Query: 783 -SPPSKLTNDVDMVSDPQPLENNEPE-KQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINE 840
S S T + + P+ + NE + K KDV+ T +P +
Sbjct: 1035 QSTQSPKTQEPSSEAKPEQKDTNEGKGKMPEKAEEVNTVTTKGSKDVKGEDT-VPKDKAG 1093
Query: 841 PQQTDSITGTETARVEDQNRDGQDEKHDSKETK 873
+ + T TE VE ++ EK DS +TK
Sbjct: 1094 EVKAPAATKTEDKTVEKSDQVKGTEKTDSVDTK 1126
>UNIPROTKB|E9PTW3 [details] [associations]
symbol:Dspp "Dentin sialophosphoprotein" species:10116
"Rattus norvegicus" [GO:0071460 "cellular response to cell-matrix
adhesion" evidence=IEA] RGD:2525 GeneTree:ENSGT00550000074777
GO:GO:0071460 IPI:IPI00198253 Ensembl:ENSRNOT00000002946
OMA:DESSIAV ArrayExpress:E9PTW3 Uniprot:E9PTW3
Length = 952
Score = 133 (51.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 74/447 (16%), Positives = 161/447 (36%)
Query: 430 DDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI 489
DDD + K+ +D++ + D S S+ +++S+S + + + + ++S D+SE
Sbjct: 513 DDDSESEDKDESDNSNHDND-SDSESKSDSSDSDSDSSDSSDSSDSSDSSDSSDSSESSD 571
Query: 490 CEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQ 549
D+S D SD S D+S+ + + + + + + + +
Sbjct: 572 SSDSSDSSDSSDSSDSSDSSDSSDSSDSDSNDSSDSSDSSDSSDSSDSSESSDSSDSSDS 631
Query: 550 SFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPP--G 607
S + + + D + +S S S +S + + D
Sbjct: 632 SDSSESSESSESSDSSDSSDSSDSSDSSESSESSDSSDSSDSSDSDSSDSSDSSDSSDSS 691
Query: 608 DKKEVAHSE--SIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSV 665
D + + S S ++ +D D ++ + + + + +S D D S+D D DS
Sbjct: 692 DSSDSSDSSDSSDSSDSSDSDSSDSDSSDSSDSSDSSDSS--DSSD-SSDSSDSSNSDSS 748
Query: 666 PEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESND 725
+S + S+ + + + D+ + + D ++ S+ D+ S +S+D
Sbjct: 749 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS--SDSSD 806
Query: 726 LPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPP 785
S SS + D+S SDS S + +S + S
Sbjct: 807 -SSDSSDSSDSSDSSDSSDSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSD 865
Query: 786 SKLTNDVDMVS-DPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEPQQT 844
S ++D D D ++++ + + D + ++
Sbjct: 866 SSDSSDGDSSDGDSSDSDSSDSDSSNSSDSDSSDSSDSSSSDSSDSDSDSKDSTSDSSDD 925
Query: 845 DSITGTETARVEDQNRDGQDEKHDSKE 871
DS +G + D + +G D H + +
Sbjct: 926 DSKSGNGNSD-SDSDSEGSDSNHSTSD 951
Score = 96 (38.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 44/258 (17%), Positives = 86/258 (33%)
Query: 620 AEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEKP 679
++ +D D + D N +S+ D D S+ DS +S + +
Sbjct: 585 SDSSDSSDSSDSSDSDSN-DSSDSSDSSDSSDSSDSSESSDSSDSSDSSDSSESSESSES 643
Query: 680 SEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXX 739
S+ + + + D+ E E D ++ S+ + S +S+D S
Sbjct: 644 SDSSDSSDSSDSSDSSESSESSDSSDSSDSSDSDSSDSSDSSDSSDSSDSSDSSDSSDSS 703
Query: 740 XXXXXXPAPPVDVEK-DNSLLSDSLPSG--KNEPDQRVLSNSVAEPSPPSKLTNDVDMVS 796
+ D + D+S SDS S + D SNS + S S ++D S
Sbjct: 704 DSSDSSDSDSSDSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSDSSDSSDSSDSSDSSDSS 763
Query: 797 DPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEPQQTDSITGTETARVE 856
D ++ + S+ + +DS ++++
Sbjct: 764 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 823
Query: 857 DQNRDGQDEKHDSKETKN 874
D N + DS ++ +
Sbjct: 824 DSNSSDSSDSSDSSDSSD 841
Score = 92 (37.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 50/266 (18%), Positives = 97/266 (36%)
Query: 615 SESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAA- 673
S+S + +D D + + +S+ D D S+D D DS + ++
Sbjct: 668 SDSSDSSDSDSSDSSDSSDSSDSSDSSDSSDSSDSSD-SSDSSDSDSSDSDSSDSSDSSD 726
Query: 674 SLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQS 733
S + S + ++ +N D+ + + D ++ S+ D+ S +S+D S
Sbjct: 727 SSDSSDSSDSSDSSDSSNSDSSDSSDSSDSSDSSDSSDSSDSSDS--SDSSD--SSDSSD 782
Query: 734 SQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPSKLTNDVD 793
S + D D+S SDS S + D S+S + S S ++D
Sbjct: 783 SSDSSDSSDSSDSSDSSD-SSDSSDSSDSSDSSDSS-DSSDSSDSNSSDSSDSSDSSDSS 840
Query: 794 MVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEPQQTDSITGTETA 853
SD ++ + D +S S+ ++ ++S +
Sbjct: 841 DSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDGDSSDGDSS-DSDSSDSDSSNSSDSDSSD 899
Query: 854 RVEDQNRDGQDEKHDSKETKNDQYID 879
+ + D D DSK++ +D D
Sbjct: 900 SSDSSSSDSSDSDSDSKDSTSDSSDD 925
Score = 86 (35.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/103 (20%), Positives = 43/103 (41%)
Query: 424 DMFLDCDDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPED 483
D + DD D TDD+ +NGD + + + S++ + +++ + D
Sbjct: 490 DSYAGEDDSSDDT--SDTDDSDSNGDDDSESEDKDESDNSNHDNDSDSESKSDSSDSDSD 547
Query: 484 ASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGEN 526
+S+ D+S D SD S D+S+ ++ ++
Sbjct: 548 SSDSSDSSDSSDSSDSSDSSESSDSSDSSDSSDSSDSSDSSDS 590
>ZFIN|ZDB-GENE-031112-4 [details] [associations]
symbol:stm "starmaker" species:7955 "Danio rerio"
[GO:0009590 "detection of gravity" evidence=IMP] [GO:0043049 "otic
placode formation" evidence=IEP] [GO:0005576 "extracellular region"
evidence=IEA] ZFIN:ZDB-GENE-031112-4 GO:GO:0005576 eggNOG:NOG12793
GO:GO:0043049 GeneTree:ENSGT00550000074777 GO:GO:0009590
EMBL:AY372242 EMBL:CT574549 EMBL:BC129155 IPI:IPI00482673
RefSeq:NP_942112.2 UniGene:Dr.79127 Ensembl:ENSDART00000105174
GeneID:386700 KEGG:dre:386700 CTD:20882 HOVERGEN:HBG095247
OMA:RPGDHSQ NextBio:20813980 Bgee:A2VD23 Uniprot:A2VD23
Length = 613
Score = 105 (42.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 55/276 (19%), Positives = 103/276 (37%)
Query: 608 DKKEVAHSESIVAEMADRD-IQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVP 666
++KE S+ ++ D D +K E +D K+ +S+ D +D D E
Sbjct: 292 EQKESVESKDHDSDSQDSDSAEKKEKHDD---KDQDSSDSADSKDSDEDKDKDHSEQKDS 348
Query: 667 EEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDL 726
E+ H + E + G ++D + DE D +E + ++ K ++ E+ +D
Sbjct: 349 EDHEHKEKHTKDKEEHKDSDEGKDDEDKSKSDEH-DKDESESKEASKSDESEQEEKKDDK 407
Query: 727 PSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPS 786
S D D+ SDS ++ D S+S ++ S
Sbjct: 408 SDSDNSSRDSHSDSDSDSHSDSDSDSHSDSHSDSDSDSHSDSDSDSDSDSDSDSDSDSDS 467
Query: 787 KLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEPQQTDS 846
+ D D D E+ + + A +D + S + E +TDS
Sbjct: 468 N-SRDKDEKKDKSS-ESRDEDSSDSDSKSNSESSETAEEDT---NDDKDSSV-EKDKTDS 521
Query: 847 ITGTETARVEDQNRDGQ--DEKHDSKETKNDQYIDK 880
+++A VE + D + D+ D+ + D +K
Sbjct: 522 ---SDSASVEANDSDDEHDDDSKDATPSSEDHTAEK 554
Score = 73 (30.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/112 (28%), Positives = 45/112 (40%)
Query: 428 DCDDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASEL 487
D D D E TD + + D A+K EA + T + +QT S D E
Sbjct: 197 DSAPDGDSASAEKTD-SDHSPDEDANKSSTEADKDDTSDKDS-SQTDEKHDSDASDKDEK 254
Query: 488 KICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQ-ETGENIALKALREAFEA 538
ED + DE D D SED S+ K + + G N +E+ E+
Sbjct: 255 H--EDKDEKSDEKDSSKD-----SEDKSQEKSDKSDDGSNSEADEQKESVES 299
>ZFIN|ZDB-GENE-050522-205 [details] [associations]
symbol:nefma "neurofilament, medium polypeptide a"
species:7955 "Danio rerio" [GO:0005882 "intermediate filament"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001664 InterPro:IPR002957 InterPro:IPR006821
Pfam:PF04732 PRINTS:PR01248 ZFIN:ZDB-GENE-050522-205 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GeneTree:ENSGT00560000076873 InterPro:IPR011098 PROSITE:PS51109
EMBL:CU467622 IPI:IPI00831776 Ensembl:ENSDART00000080256
ArrayExpress:F1QCR7 Bgee:F1QCR7 Uniprot:F1QCR7
Length = 849
Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
Identities = 87/442 (19%), Positives = 168/442 (38%)
Query: 417 FVQMPIEDMFLDCD-DDVDGNLKETTDD-APTNGDTSASKDVAEASESKTGAVEGQTQTS 474
FV+ IE+ ++ + ++D L E ++ + D ++ EA E + G + + +
Sbjct: 423 FVEEIIEETRVEDEKSEMDEALAEMAEELSAAKEDEEGGEEEGEAEEGEEGGDDEEGEKE 482
Query: 475 PMETSKPED---ASELKICEDTSKPKDESDVKV--DEQMLKSEDTSEGKVGQETGENIAL 529
+ E+ +++ K+ ++E K DE+ + E+ +G +E GE
Sbjct: 483 DEGEGEEEEVVASTQAKVASAAPAEEEEEGEKEGGDEEQEEEEEAGKGDEEEEKGEEEEG 542
Query: 530 KALREAFEAVGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNS 589
+ ++ EA + P++ A +P A GG + + + +G+
Sbjct: 543 EEEKKEEEAEEEAEESKAPEAKA---SPESEKAEEKQASGGEEEAEEEGDENQEGDAGSD 599
Query: 590 PAMQLAAKHCFILEDPPGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDE 649
K + E P + E A + E +++ K E E V E + S E
Sbjct: 600 KG-STDEKEVEVKEQPKKAEPEAAKEDKKGKE--EKEEAKSEK-EKATVTETKAESPKAE 655
Query: 650 --RDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELS 707
+ S K E E + E P +K + P ++P+K+EP E S
Sbjct: 656 SPKAESPKAESPKSESPKSESPKKETPKTEAP-KKDPPKSEPPKTESPKKEEPKA--EPS 712
Query: 708 NPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSD-SLPSG 766
++PK ++PS E D P + + K P D +K+ ++ D
Sbjct: 713 KKETPK-SEPSKAEPKEDFPKPADEKATKKSETEKE-----PEDKKKEATVNGDMGKKDD 766
Query: 767 KNEPDQR-VLSNSVAEPSPPSKLTNDVDMVSDPQPLENNEPE-KQIXXXXXXXXXXXXAP 824
K D++ V+SN V E + + V + + + E KQ+
Sbjct: 767 KKVSDKKEVISNGVDESPTKDESSQRVVITKTVETITTGEDGVKQVTKTVTVTEKGEEVQ 826
Query: 825 KDVEMVSTSLPSEINEPQQTDS 846
+ V+ S P+E + T++
Sbjct: 827 ETVQEKVVSKPAEKQAVKATEA 848
>DICTYBASE|DDB_G0293562 [details] [associations]
symbol:DDB_G0293562 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293562 EMBL:AAFI02000218 eggNOG:NOG253936
InterPro:IPR014898 Pfam:PF08790 RefSeq:XP_629009.1
ProteinModelPortal:Q54BM0 EnsemblProtists:DDB0192009 GeneID:8629293
KEGG:ddi:DDB_G0293562 InParanoid:Q54BM0 OMA:ECASTVI
ProtClustDB:CLSZ2846558 Uniprot:Q54BM0
Length = 527
Score = 124 (48.7 bits), Expect = 0.00042, P = 0.00042
Identities = 78/384 (20%), Positives = 147/384 (38%)
Query: 421 PIEDMFLDCDDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSK 480
PI+ + D D + + D+ + E + +T VE + + S S
Sbjct: 146 PIKKVESSDSSDSDSSDSSSEDEKKKKDNKKVETKKVETKKVETKKVETKKEESSDSDSS 205
Query: 481 PEDASELKI-CEDTSKPKDESDVKVDEQMLKSEDT-SEGKVGQETGENIALKALREAFEA 538
D+S + ED K KD V++ ++ +SE + SE + + + + K E+ ++
Sbjct: 206 DSDSSSSESESEDEKKKKDTKKVEIKKEESESESSESESEDENKDNKKVGTKK-EESSDS 264
Query: 539 VGYVPTHETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKH 598
E+ + N + + + + S+ SS S S + + K
Sbjct: 265 DSSSSESESEDEKKKKNNKKVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKD 324
Query: 599 CFILEDPP-GDKKEVAHSESIVAEMADRD---IQKDETLEDINVKECNSASVLDER-DLS 653
+E G + SES+ E D + I+K+E+ + + +S S +E+ D+
Sbjct: 325 SKKVETKKEGSSDSESSSESVEDEKMDIEKVEIKKEESSDSESSSPASSESKEEEKMDIE 384
Query: 654 NDHGDKK-----IEDSVPEEKRHAA--SLNEKPSE---KLNGATGPANQDTPEKDEPGDL 703
+ K+ +S E+K+ S +++ SE K ++ + + +K E D
Sbjct: 385 KEETKKEESSSSSSESEEEQKKSKKEDSDSDESSEDEKKKEESSSSSESEDEKKKEDSDS 444
Query: 704 NELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSL 763
+ K +D+ S ES D K SS + E D+S SDS
Sbjct: 445 ESSEDEKKKEDSDSSSSSESEDEDKKKKDSSSSESESEKESDSSSSSS-ESDSSSSSDSD 503
Query: 764 PSGKNEPDQRVLSNSVAEPSPPSK 787
S + S+S +E S+
Sbjct: 504 SSSSSSSSSSSSSSSESESESDSE 527
Score = 113 (44.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 53/270 (19%), Positives = 102/270 (37%)
Query: 615 SESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGD-KKI----EDSVPEEK 669
S+S +E D +K + + + +K+ S S E + +++ D KK+ E+S +
Sbjct: 207 SDSSSSESESEDEKKKKDTKKVEIKKEESESESSESESEDENKDNKKVGTKKEESSDSDS 266
Query: 670 RHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSK 729
+ S +E +K N A ++ E +E S+ S ++ +E SK
Sbjct: 267 SSSESESEDEKKKKNNKKVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKDSK 326
Query: 730 VLQSSQKXXXXXXXXXPA---PPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAEPSPPS 786
+++ ++ + +D+EK +S S + P S S E
Sbjct: 327 KVETKKEGSSDSESSSESVEDEKMDIEKVEIKKEESSDSESSSPAS---SESKEEEKMDI 383
Query: 787 KLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEPQQ-TD 845
+ S E+ E +K+ K E S+S SE + ++ +D
Sbjct: 384 EKEETKKEESSSSSSESEEEQKKSKKEDSDSDESSEDEKKKEESSSSSESEDEKKKEDSD 443
Query: 846 SITGTETARVEDQNRDGQDEKHDSKETKND 875
S + + + ED + E D + K D
Sbjct: 444 SESSEDEKKKEDSDSSSSSESEDEDKKKKD 473
Score = 61 (26.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 439 ETTDDAPTNG-DTSASKDVAEASESKT-GAVEGQTQTSPMETSKPEDA-SELKICEDTSK 495
E++D + ++ D+S+S+ E + K VE + +E+S D+ S ED K
Sbjct: 111 ESSDSSDSSSSDSSSSESEDEKKKKKEIKKVETKKPIKKVESSDSSDSDSSDSSSEDEKK 170
Query: 496 PKDESDVKVDEQMLKSEDTSEGKVGQE 522
KD V+ + K +T + + +E
Sbjct: 171 KKDNKKVETKKVETKKVETKKVETKKE 197
>FB|FBgn0037555 [details] [associations]
symbol:Ada2b "transcriptional Adaptor 2b" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA;NAS;IPI]
[GO:0004402 "histone acetyltransferase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035066 "positive regulation of histone
acetylation" evidence=IMP] [GO:0043966 "histone H3 acetylation"
evidence=IMP] [GO:0035222 "wing disc pattern formation"
evidence=IGI] [GO:0007412 "axon target recognition" evidence=IMP]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00569 PROSITE:PS01357 PROSITE:PS50135
SMART:SM00291 SMART:SM00717 EMBL:AE014297 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0035222 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 eggNOG:COG5114 GO:GO:0000124 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293
GeneTree:ENSGT00530000063657 GO:GO:0035066 GO:GO:0005700
GO:GO:0007412 GO:GO:0043966 HSSP:O75478 KO:K15127 EMBL:AY142213
EMBL:AY058546 RefSeq:NP_001027151.1 RefSeq:NP_649773.1
UniGene:Dm.20776 ProteinModelPortal:Q8I8V0 SMR:Q8I8V0 IntAct:Q8I8V0
MINT:MINT-312264 STRING:Q8I8V0 PRIDE:Q8I8V0
EnsemblMetazoa:FBtr0100368 GeneID:40966 KEGG:dme:Dmel_CG9638
CTD:40966 FlyBase:FBgn0037555 InParanoid:Q8I8V0 OMA:VCLSGAP
OrthoDB:EOG4DR7TX PhylomeDB:Q8I8V0 GenomeRNAi:40966 NextBio:821505
Bgee:Q8I8V0 Uniprot:Q8I8V0
Length = 555
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 29/96 (30%), Positives = 46/96 (47%)
Query: 319 EYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNG-KFGSDMSSSDFILMVPGEAA-GVSG 376
+Y+C +C D R HC + +FDLC CF G + G+ ++ + M G + V
Sbjct: 10 KYNCTNCQDDIQGIRVHCAECENFDLCLQCFAAGAEIGAHQNNHSYQFMDTGTSILSVFR 69
Query: 377 GK--WTDQXXXXXXXXXXXYK-ENWNEIAEHVATKT 409
GK WT + Y NW +I++H+ TK+
Sbjct: 70 GKGAWTAREEIRLLDAIEQYGFGNWEDISKHIETKS 105
>ZFIN|ZDB-GENE-050522-557 [details] [associations]
symbol:tada2b "transcriptional adaptor 2 (ADA2
homolog, yeast)-beta" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000433 InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 PROSITE:PS01357
PROSITE:PS50135 SMART:SM00291 SMART:SM00717
ZFIN:ZDB-GENE-050522-557 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:COG5114 InterPro:IPR017884
PROSITE:PS51293 HSSP:O75478 EMBL:BC055562 EMBL:BC095241
EMBL:BC165604 IPI:IPI00510934 RefSeq:NP_001019614.1
UniGene:Dr.76959 ProteinModelPortal:Q503N9 STRING:Q503N9
GeneID:554156 KEGG:dre:554156 CTD:93624 HOGENOM:HOG000007843
HOVERGEN:HBG102016 InParanoid:Q7SXK2 KO:K15127 OrthoDB:EOG4001JG
NextBio:20880714 ArrayExpress:Q503N9 Uniprot:Q503N9
Length = 486
Score = 124 (48.7 bits), Expect = 0.00037, P = 0.00037
Identities = 48/195 (24%), Positives = 80/195 (41%)
Query: 321 HCNSCSADCSRKRYHCQKQADFDLCTDCFNNG-KFGSDMSSSDFILMVPGEAAGVSG--- 376
+C +C AD + R C + D +LC +CF+ G + G+ + V G + G
Sbjct: 8 YCVNCLADVTNLRIRCAECQDIELCPECFSAGAEIGNHRRWHGY-QQVDGGRFSLWGPEA 66
Query: 377 -GKWTDQXXXXXXXXXXXYK-ENWNEIAEHV-ATKTKAQCILHFVQMPIE-DMFLDCDDD 432
G WT + Y NW ++A HV A++T + + H+V M I ++ C D
Sbjct: 67 EGGWTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYIHGNLGKACIPD 126
Query: 433 VDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETS-KPE-DASELKIC 490
N + T P+ G S S T + Q P+ + E D K+
Sbjct: 127 SIPN-RVTDHTCPSGGPLSPSLTTPLPPLDITVVEQQQLGYMPLRDDYEIEYDQEAEKLI 185
Query: 491 EDTSKPKDESDVKVD 505
S D+ D++++
Sbjct: 186 SGLSVNYDDEDIEIE 200
>TAIR|locus:504955937 [details] [associations]
symbol:AT2G22795 "AT2G22795" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] GO:GO:0005794 EMBL:CP002685
GO:GO:0005768 GO:GO:0005802 IPI:IPI00534353 RefSeq:NP_850032.1
UniGene:At.45724 UniGene:At.74141 PRIDE:F4IKG5
EnsemblPlants:AT2G22795.1 GeneID:816810 KEGG:ath:AT2G22795
OMA:ESTCRKT Uniprot:F4IKG5
Length = 734
Score = 125 (49.1 bits), Expect = 0.00052, P = 0.00052
Identities = 82/449 (18%), Positives = 158/449 (35%)
Query: 430 DDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI 489
D D N++E ++ GD AS +V SE KT E + K E+ + I
Sbjct: 287 DIDEKANIEEARENN-YKGD-DASSEVVHESEEKTSESENSEKVEDKSGIKTEEVEDSVI 344
Query: 490 CEDTSKPKDESDVKVDEQMLKSED--TSEGKVG-QETGENIALKAL--REAFEAVGYVPT 544
D + DE+ S S+ G + GE++ L +E ++ G
Sbjct: 345 KSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNELLEKEFNDSNGESSV 404
Query: 545 HETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILED 604
+ G+ + + G + T S + K ++
Sbjct: 405 TGKSTGSGDGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQE 464
Query: 605 PPGDKKEVAHS--ESIVAEM-ADRDIQKDET--LEDINVKECNSASVLDERDLSNDHGDK 659
DK+ A ES E D++ +K E+ LE+ KE + +E +K
Sbjct: 465 ETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKE-DETKEKEESSSQEKTEEK 523
Query: 660 KIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKD-EPGDLNELSNPKSPKDNQPS 718
+ E EE +K +EK+ + +++ E + E + E S+ + K+ +
Sbjct: 524 ETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENE 583
Query: 719 IVEESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNS 778
+E+ P + ++ +K A + ++ + + S NE + V + S
Sbjct: 584 KIEKEESAPQE--ETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTES 641
Query: 779 VAEPSPPS--KLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPS 836
+ K T++ S + ++ +KQ +V + S
Sbjct: 642 EKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEVTQEQSDSSS 701
Query: 837 EINEPQQTDSITGTETARVEDQNRDGQDE 865
+ N PQ+ + T+ + D G +E
Sbjct: 702 DTNLPQEVKDVR-TDLETLPDSGNGGSNE 729
>UNIPROTKB|F1NQ15 [details] [associations]
symbol:HAUS6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0051297 "centrosome
organization" evidence=IEA] [GO:0070652 "HAUS complex"
evidence=IEA] InterPro:IPR026797 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0051225 GO:GO:0051297 GO:GO:0070652
PANTHER:PTHR16151 GeneTree:ENSGT00390000008250 EMBL:AADN02057304
EMBL:AADN02057305 EMBL:AADN02057306 IPI:IPI00822239
Ensembl:ENSGALT00000024342 ArrayExpress:F1NQ15 Uniprot:F1NQ15
Length = 931
Score = 126 (49.4 bits), Expect = 0.00055, P = 0.00054
Identities = 83/318 (26%), Positives = 138/318 (43%)
Query: 431 DDVDGNLKETTDDA---PTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASEL 487
+D DG LK + D+ PT +S S +++EASE+K E T +P+ E
Sbjct: 426 EDSDGTLKSSMIDSLLTPTRRVSSKSSELSEASENKDLLTEKDLHT------EPDSGKEK 479
Query: 488 KICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETG----ENIALKALREAFEAVGYVP 543
+ + SK DE D + +L+S++ SEG V Q E++ KA E E + +
Sbjct: 480 SVPPEISK--DEED---ELTLLESQENSEGPVTQADASVKKEDVLEKAREELAEQIAKMV 534
Query: 544 THETPQSFAEVGNPVMALAAFLTLLG-GPDLTTASARSSLKSISGNSPAMQLAAKHCFIL 602
T E+PQS E G +AL ++ L P LT + +++ ++ + +
Sbjct: 535 TSESPQSGGERG---IALDDLISSLDFNPFLTRKQIPRTPENLLTE---IRNSWRKAIQS 588
Query: 603 EDPPGDKKEVAHSESIVAEM-ADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKI 661
ED D + V+ E I A + A IQ D+ I++ +S+S + D S ++K
Sbjct: 589 EDL-SDAELVSTKEIIDAPVDASCTIQ-DKAA--ISLDGASSSSAVP--DFSYPLSEQKS 642
Query: 662 EDSVPEEKRHAASLNEKPSEKL--NGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSI 719
+ S E + + SE L G ++ E++E D + + Q I
Sbjct: 643 QGSCAEFTAQKQRMINQISESLLCEEIPGMPEDESSEEEELEDTVYGGSFTGKTEEQSCI 702
Query: 720 -VEESNDLPSKVLQSSQK 736
VE+S P + S K
Sbjct: 703 YVEKSLSTPCVSSEDSSK 720
>UNIPROTKB|Q86TJ2 [details] [associations]
symbol:TADA2B "Transcriptional adapter 2-beta" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030914 "STAGA complex"
evidence=IEA] [GO:0070461 "SAGA-type complex" evidence=IDA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00569 PROSITE:PS01357 PROSITE:PS50135
SMART:SM00291 SMART:SM00717 GO:GO:0006355 EMBL:CH471131
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:COG5114
InterPro:IPR017884 InterPro:IPR016827 PIRSF:PIRSF025024
PROSITE:PS51293 OMA:GRSPSHI GO:GO:0070461 GO:GO:0030914
EMBL:AC097382 HSSP:O75478 CTD:93624 HOGENOM:HOG000007843
HOVERGEN:HBG102016 KO:K15127 OrthoDB:EOG4001JG EMBL:AK093974
EMBL:AK096655 EMBL:BC047794 EMBL:BC101334 EMBL:BC101335
EMBL:BC101336 EMBL:BC101337 EMBL:BX641147 IPI:IPI00761105
IPI:IPI00878171 IPI:IPI00879434 RefSeq:NP_689506.2
UniGene:Hs.518614 ProteinModelPortal:Q86TJ2 SMR:Q86TJ2
IntAct:Q86TJ2 STRING:Q86TJ2 PhosphoSite:Q86TJ2 DMDM:166225686
PaxDb:Q86TJ2 PRIDE:Q86TJ2 Ensembl:ENST00000310074
Ensembl:ENST00000512388 Ensembl:ENST00000515646 GeneID:93624
KEGG:hsa:93624 UCSC:uc003gjw.4 UCSC:uc010idi.3
GeneCards:GC04P007043 HGNC:HGNC:30781 HPA:HPA035770 MIM:608790
neXtProt:NX_Q86TJ2 PharmGKB:PA165664556 InParanoid:Q86TJ2
ChiTaRS:TADA2B GenomeRNAi:93624 NextBio:78164 ArrayExpress:Q86TJ2
Bgee:Q86TJ2 Genevestigator:Q86TJ2 Uniprot:Q86TJ2
Length = 420
Score = 121 (47.7 bits), Expect = 0.00062, P = 0.00062
Identities = 49/196 (25%), Positives = 80/196 (40%)
Query: 321 HCNSCSADCSRKRYHCQKQADFDLCTDCFNNG-KFGSDMSSSDFILMVPGEAA--GVSG- 376
+C C A+ S R+ C + D +LC +CF+ G + G + L+ G G
Sbjct: 8 YCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAE 67
Query: 377 GKWTDQXXXXXXXXXXXYK-ENWNEIAEHV-ATKTKAQCILHFVQMPIE-DMFLDCDDDV 433
G WT + + NW ++A HV A++T + + H+V M I ++ C D
Sbjct: 68 GGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDT 127
Query: 434 DGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPM----ETSKPEDASELKI 489
N + T P+ G S S + A + Q P+ E +DA L
Sbjct: 128 IPN-RVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAETL-- 184
Query: 490 CEDTSKPKDESDVKVD 505
S D+ DV+++
Sbjct: 185 ISGLSVNYDDDDVEIE 200
>RGD|1561605 [details] [associations]
symbol:Tada2b "transcriptional adaptor 2B" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030914 "STAGA
complex" evidence=IEA;ISO] [GO:0070461 "SAGA-type complex"
evidence=ISO] InterPro:IPR000433 InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 PROSITE:PS01357
PROSITE:PS50135 SMART:SM00291 SMART:SM00717 RGD:1561605
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 eggNOG:COG5114 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293
GeneTree:ENSGT00530000063657 OMA:GRSPSHI GO:GO:0030914
EMBL:CH473963 CTD:93624 HOGENOM:HOG000007843 HOVERGEN:HBG102016
KO:K15127 OrthoDB:EOG4001JG EMBL:BC169109 IPI:IPI00364741
RefSeq:NP_001163926.1 UniGene:Rn.22124 SMR:B5DFL8 STRING:B5DFL8
Ensembl:ENSRNOT00000037061 GeneID:289717 KEGG:rno:289717
NextBio:630206 Genevestigator:B5DFL8 Uniprot:B5DFL8
Length = 420
Score = 121 (47.7 bits), Expect = 0.00062, P = 0.00062
Identities = 49/196 (25%), Positives = 80/196 (40%)
Query: 321 HCNSCSADCSRKRYHCQKQADFDLCTDCFNNG-KFGSDMSSSDFILMVPGEAA--GVSG- 376
+C C A+ S R+ C + D +LC +CF+ G + G + L+ G G
Sbjct: 8 YCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAE 67
Query: 377 GKWTDQXXXXXXXXXXXYK-ENWNEIAEHV-ATKTKAQCILHFVQMPIE-DMFLDCDDDV 433
G WT + + NW ++A HV A++T + + H+V M I ++ C D
Sbjct: 68 GGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDT 127
Query: 434 DGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPM----ETSKPEDASELKI 489
N + T P+ G S S + A + Q P+ E +DA L
Sbjct: 128 IPN-RVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAETL-- 184
Query: 490 CEDTSKPKDESDVKVD 505
S D+ DV+++
Sbjct: 185 ISGLSVNYDDDDVEIE 200
>CGD|CAL0005156 [details] [associations]
symbol:SRP40 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0005156 Pfam:PF05022 EMBL:AACQ01000080 eggNOG:NOG318801
InterPro:IPR007718 RefSeq:XP_715790.1 STRING:Q5A1Y5 GeneID:3642605
KEGG:cal:CaO19.2859 Uniprot:Q5A1Y5
Length = 428
Score = 91 (37.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 20/93 (21%), Positives = 50/93 (53%)
Query: 431 DDVDGNLKETTD-DAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI 489
D+V+ K++ ++ ++ + S+S+ + S+S++ + + + +S E+S + S
Sbjct: 123 DEVENQEKKSKPRNSSSDSEDSSSESESSTSDSESSSSDSDSSSSDSESSSSDSESSSSD 182
Query: 490 CEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQE 522
ED+ +D+ D + ++ SED+ KV ++
Sbjct: 183 SEDSDDEEDKEDKEAEKDNKDSEDSENEKVEED 215
Score = 77 (32.2 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 37/161 (22%), Positives = 70/161 (43%)
Query: 575 TASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEVAHSESIVAEMADRDIQKDETLE 634
T+S SS +S + ++ D D + S+S + +D D D
Sbjct: 219 TSSDSSSSSDSKSDSDSDSSSSSDSSSDSDSSSDSDSSSSSDSDSSSSSDSDSDSDS--- 275
Query: 635 DINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKR--HAASLNE-KPSEKLNG---ATG 688
D + + +S S ++ + S+D + K E PE+K+ H + E KP +K ++
Sbjct: 276 DSDSDDNSSESSSEDEESSSD-SESKEEQKQPEDKKRKHTDDIKEEKPVKKFKNESESSA 334
Query: 689 PANQD----TPEKD-EPGDLNELSNPKSPKDN-QPSIVEES 723
++ D TPE + +PG S K N + S+++++
Sbjct: 335 SSSTDSIPATPEPELKPGQRKHFSRIDRSKVNFENSVLQDN 375
>UNIPROTKB|Q5A1Y5 [details] [associations]
symbol:SRP40 "Putative uncharacterized protein SRP40"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0005156 Pfam:PF05022 EMBL:AACQ01000080
eggNOG:NOG318801 InterPro:IPR007718 RefSeq:XP_715790.1
STRING:Q5A1Y5 GeneID:3642605 KEGG:cal:CaO19.2859 Uniprot:Q5A1Y5
Length = 428
Score = 91 (37.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 20/93 (21%), Positives = 50/93 (53%)
Query: 431 DDVDGNLKETTD-DAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI 489
D+V+ K++ ++ ++ + S+S+ + S+S++ + + + +S E+S + S
Sbjct: 123 DEVENQEKKSKPRNSSSDSEDSSSESESSTSDSESSSSDSDSSSSDSESSSSDSESSSSD 182
Query: 490 CEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQE 522
ED+ +D+ D + ++ SED+ KV ++
Sbjct: 183 SEDSDDEEDKEDKEAEKDNKDSEDSENEKVEED 215
Score = 77 (32.2 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 37/161 (22%), Positives = 70/161 (43%)
Query: 575 TASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEVAHSESIVAEMADRDIQKDETLE 634
T+S SS +S + ++ D D + S+S + +D D D
Sbjct: 219 TSSDSSSSSDSKSDSDSDSSSSSDSSSDSDSSSDSDSSSSSDSDSSSSSDSDSDSDS--- 275
Query: 635 DINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKR--HAASLNE-KPSEKLNG---ATG 688
D + + +S S ++ + S+D + K E PE+K+ H + E KP +K ++
Sbjct: 276 DSDSDDNSSESSSEDEESSSD-SESKEEQKQPEDKKRKHTDDIKEEKPVKKFKNESESSA 334
Query: 689 PANQD----TPEKD-EPGDLNELSNPKSPKDN-QPSIVEES 723
++ D TPE + +PG S K N + S+++++
Sbjct: 335 SSSTDSIPATPEPELKPGQRKHFSRIDRSKVNFENSVLQDN 375
>RGD|1565734 [details] [associations]
symbol:Ercc6l "excision repair cross-complementing rodent repair
deficiency complementation group 6 - like" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR011990 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1565734 GO:GO:0005524 GO:GO:0003677
Gene3D:1.25.40.10 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:54821 GeneTree:ENSGT00590000083118 OMA:TKNGDLE
OrthoDB:EOG4FR0RD EMBL:CH473966 IPI:IPI00362012
RefSeq:NP_001092144.1 UniGene:Rn.72855 Ensembl:ENSRNOT00000004310
GeneID:317252 KEGG:rno:317252 UCSC:RGD:1565734 NextBio:671491
Uniprot:D4A0G9
Length = 1230
Score = 126 (49.4 bits), Expect = 0.00076, P = 0.00076
Identities = 66/307 (21%), Positives = 124/307 (40%)
Query: 436 NLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKI-CEDTS 494
NL+ + D SAS + +++ +E + P+E S P+ + + ED++
Sbjct: 895 NLESNEPMIEISDDLSASPSALQGAQAMEAQLE--LKKDPLE-SPPQYECDFNLFLEDSA 951
Query: 495 KPKDESDVKVDEQMLKSEDTSE--GKVGQETGENIALKALREAFEAVGYVPTHETPQSFA 552
+ K E + K G G+E+ N++L + + E + ++
Sbjct: 952 DTRQNLSSKFLEHVEKENSLQRPAGNSGEESAHNLSLDSSNKIDEESEVITVKTKNKARR 1011
Query: 553 EVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEV 612
+ + AF + SS+K ++P F P D
Sbjct: 1012 ILSDDEDEEDAFKDTSTNSFSVSPLTFSSVKHFDASTPQNDSNPSRRFFSPKIPDDVNTS 1071
Query: 613 AHSE-SIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRH 671
H S+ + + ++ D+ +ED+ + S+ E +LS D ++ + + EE+R
Sbjct: 1072 LHPRRSLASRRSLINVVLDD-MEDMEERLDTSSEEESEPELSEDSNEEAV--ACTEEQRS 1128
Query: 672 AASL---NEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPS 728
A+L N+ S + T PA Q +P EP + L +P P+D P+ VE +ND S
Sbjct: 1129 GATLASGNKHSSLTESEPTSPAPQSSPCAPEPSSSDPLLDP--PQD--PA-VEAANDYES 1183
Query: 729 KVLQSSQ 735
V + +
Sbjct: 1184 LVARGKE 1190
>FB|FBgn0001253 [details] [associations]
symbol:ImpE1 "Ecdysone-inducible gene E1" species:7227
"Drosophila melanogaster" [GO:0019898 "extrinsic to membrane"
evidence=TAS] [GO:0007561 "imaginal disc eversion" evidence=TAS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR002172
Pfam:PF00057 PROSITE:PS50068 SMART:SM00192 EMBL:AE014296
GO:GO:0019898 InterPro:IPR006149 Pfam:PF01683 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 HSSP:P01130
GO:GO:0007561 GeneTree:ENSGT00700000105007 RefSeq:NP_524849.2
UniGene:Dm.1785 ProteinModelPortal:Q7KUB3 SMR:Q7KUB3 STRING:Q7KUB3
PRIDE:Q7KUB3 EnsemblMetazoa:FBtr0076606 EnsemblMetazoa:FBtr0333057
GeneID:45879 KEGG:dme:Dmel_CG32356 UCSC:CG32356-RA CTD:45879
FlyBase:FBgn0001253 InParanoid:Q7KUB3 OMA:HEETELT OrthoDB:EOG441NT2
PhylomeDB:Q7KUB3 GenomeRNAi:45879 NextBio:838431
ArrayExpress:Q7KUB3 Bgee:Q7KUB3 Uniprot:Q7KUB3
Length = 1616
Score = 127 (49.8 bits), Expect = 0.00081, P = 0.00081
Identities = 91/455 (20%), Positives = 173/455 (38%)
Query: 421 PIEDMFLDCDDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSK 480
P E + ++ V+ + D+ + A ++ E + +T A E P +K
Sbjct: 592 PTEALKIEQPAQVESE-SQNVDEVGKPEEPQAEMEI-EKEKEETAATEAAEVELPATEAK 649
Query: 481 PEDASELKICEDTS--KPKD-ESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFE 537
P+ SE+ E ++ KP E D+ Q+ + + T + QE E + + + E
Sbjct: 650 PDMESEIDQVEQSADIKPTSGEDDLNEANQLNQDQVTEPAALEQEEIEEKEPEQVVDMHE 709
Query: 538 AVGYVPTHETPQSFAEVGNPVMALA-AFLTLLGGPDLTTASARSSLK-SISGNSPAMQLA 595
T + Q + V A+ A L P A ++ ++ P ++A
Sbjct: 710 DADEATTEKPVQDHDQ--EEVEAITEAEHGQLTYPTNDDELAPVEIEPELTTEEP--EIA 765
Query: 596 AKHCFILEDPPGDKKEVAHSESIVA-EMADRDIQKDETLEDINVKECNSASVLDERDLSN 654
+ E + E E+ +A E + ++ +E I E + A + DL
Sbjct: 766 ENTTELPEQQQQQQDEEEIEEAALAHEEQVQQVEPEENANAIKTPEVSEAIAEPQADLET 825
Query: 655 DHG-DKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLN-ELSNPKSP 712
+K+IE P+ H +E++ A P + P DE ++ + + P+ P
Sbjct: 826 PSATEKEIE---PQTADHVEEEPVAITERIQEAE-PEPEIEPTNDEVSQVDADQAEPELP 881
Query: 713 KDNQPSIVEESNDLPSK--VLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEP 770
+ I EE+ + P++ V + +P + VE+D + KNE
Sbjct: 882 IKSDADIAEEAAEEPAQTEVAPEVETETEASESAQTSPEISVEQDEVAID------KNEN 935
Query: 771 DQRVLSNSVAEPSPPSKLTNDVDMVSDPQPL-ENNEPEKQIXXXXXXXXXXXXAPKDVEM 829
D + AEP+ +L + +PQP+ E E Q P +++
Sbjct: 936 DNIIQG---AEPNEEDEL------IPEPQPMPEEEELPVQQEASAVPEDHKLTKP-EMDY 985
Query: 830 VSTSLPSEINEPQQTDSITGTETARVEDQNRDGQD 864
S E++ P++T TA +E + D ++
Sbjct: 986 TSVEHLQELSRPEET-------TAAIEAEESDSRE 1013
>UNIPROTKB|Q9NZW4 [details] [associations]
symbol:DSPP "Dentin sialophosphoprotein" species:9606 "Homo
sapiens" [GO:0031214 "biomineral tissue development" evidence=IEA]
[GO:0071460 "cellular response to cell-matrix adhesion"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=TAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005509 "calcium ion binding"
evidence=TAS] [GO:0005518 "collagen binding" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0001503 "ossification" evidence=TAS] GO:GO:0005578
GO:GO:0005509 GO:GO:0001501 GO:GO:0005518 eggNOG:NOG12793
GO:GO:0031214 GO:GO:0001503 GO:GO:0005201 EMBL:AF163151
EMBL:AC093895 EMBL:AF094508 IPI:IPI00872967 RefSeq:NP_055023.2
UniGene:Hs.678914 ProteinModelPortal:Q9NZW4 STRING:Q9NZW4
PhosphoSite:Q9NZW4 DMDM:215273974 PaxDb:Q9NZW4 PRIDE:Q9NZW4
Ensembl:ENST00000282478 Ensembl:ENST00000399271 GeneID:1834
KEGG:hsa:1834 UCSC:uc003hqu.3 CTD:1834 GeneCards:GC04P088529
HGNC:HGNC:3054 HPA:HPA036230 MIM:125420 MIM:125485 MIM:125490
MIM:125500 MIM:605594 neXtProt:NX_Q9NZW4 Orphanet:1653
Orphanet:166260 Orphanet:166265 PharmGKB:PA27507 HOVERGEN:HBG098252
OMA:ERESKVQ OrthoDB:EOG41RPVG GenomeRNAi:1834 NextBio:7491
PMAP-CutDB:A8MUI0 ArrayExpress:Q9NZW4 Bgee:Q9NZW4 CleanEx:HS_DSPP
Genevestigator:Q9NZW4 GermOnline:ENSG00000152591 GO:GO:0071460
Uniprot:Q9NZW4
Length = 1301
Score = 126 (49.4 bits), Expect = 0.00081, P = 0.00081
Identities = 85/447 (19%), Positives = 170/447 (38%)
Query: 432 DVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICE 491
D D + + D+ + D+S S D +++S+SK+ + + ++ +S + SK D+S+
Sbjct: 592 DSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSD-SK-SDSSDSN-SS 648
Query: 492 DTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSF 551
D+S D SD S D+S+ + ++ ++ ++ + E+ S
Sbjct: 649 DSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSN---SSESSDS- 704
Query: 552 AEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKE 611
++ + + ++ + D + S+ SS S S NS ++ D +
Sbjct: 705 SDSSDSDSSDSSDSSNSNSSD--SDSSNSSDSSDSSNSSDSSDSSD-----SSNSSDSSD 757
Query: 612 VAHSESIVAEMADRDIQKDETLEDINVKECN-SASVLDERDLSNDHGDKKIEDSVPEEKR 670
+ S + ++ +D D + + N + N S++ D D SN DS +
Sbjct: 758 SSDSSNS-SDSSDSSDSSDSS-DSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDS-SDSSD 814
Query: 671 HAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKV 730
+ S + S+ N + + ++ + + D ++ S+ S + S +S+D S
Sbjct: 815 SSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSD-SSDS 873
Query: 731 LQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSV--AEPSPPSKL 788
SS + NS SDS S N D SNS +E S S
Sbjct: 874 SNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSS-NSSDSSDSSNSSDSSESSNSSDN 932
Query: 789 TNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEPQQTDSIT 848
+N D + ++++ D +S S N +DS
Sbjct: 933 SNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSS--NSSDSSDSSD 990
Query: 849 GTETARVEDQ-NRDGQDEKHDSKETKN 874
++++ D N + DS ++ N
Sbjct: 991 SSDSSDSSDSSNSSDSSDSSDSSDSSN 1017
>CGD|CAL0000716 [details] [associations]
symbol:ADA2 species:5476 "Candida albicans" [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:1900189 "positive regulation of cell adhesion involved in
single-species biofilm formation" evidence=IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA] [GO:0046695 "SLIK
(SAGA-like) complex" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001786 "phosphatidylserine binding"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IMP] [GO:0000988 "protein binding transcription
factor activity" evidence=IGI;IMP] [GO:0043709 "cell adhesion
involved in single-species biofilm formation" evidence=IMP]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0035066
"positive regulation of histone acetylation" evidence=IEA]
[GO:0010520 "regulation of reciprocal meiotic recombination"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0044114 "development of symbiont in host"
evidence=IMP] InterPro:IPR000433 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569
Pfam:PF04433 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934
SMART:SM00291 SMART:SM00717 CGD:CAL0000716 GO:GO:0005634
GO:GO:0009405 GO:GO:0043565 GO:GO:0008270 GO:GO:0016573
GO:GO:0003700 GO:GO:0006357 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0035690 GO:GO:0031505 eggNOG:COG5114
KO:K11314 InterPro:IPR017884 InterPro:IPR016827 PIRSF:PIRSF025024
PROSITE:PS51293 GO:GO:0010811 GO:GO:0043709 GO:GO:1900189
EMBL:AACQ01000114 EMBL:AACQ01000113 GO:GO:0044182 GO:GO:0044114
GO:GO:0000988 RefSeq:XP_713936.1 RefSeq:XP_713994.1
ProteinModelPortal:Q59WH0 SMR:Q59WH0 STRING:Q59WH0 GeneID:3644385
GeneID:3644450 KEGG:cal:CaO19.2331 KEGG:cal:CaO19.9867
Uniprot:Q59WH0
Length = 445
Score = 124 (48.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 320 YHCNSCSADCSRK-RYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGK 378
+HC+ CS+DC+ + R C D+DLC CF G D ++ +
Sbjct: 8 FHCDVCSSDCTNRIRIQCAICTDYDLCVPCFAAGLTTGDHKPWHDYQIIEQNTYPIFDRD 67
Query: 379 W-TDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIE 423
W D+ NW +IA+H+ ++K + H+ ++ +E
Sbjct: 68 WGADEELLLIQGCETSGLGNWADIADHIGNRSKEEVAEHYFKIYLE 113
Score = 42 (19.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 419 QMPIEDMFLDCDDDV-DGNLKETTDD 443
++PI+DM D +D D +LK T D
Sbjct: 186 EIPIKDMVFDPEDSANDIDLKLTILD 211
>UNIPROTKB|Q59WH0 [details] [associations]
symbol:ADA2 "Putative uncharacterized protein ADA2"
species:237561 "Candida albicans SC5314" [GO:0000988 "protein
binding transcription factor activity" evidence=IGI;IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IMP] [GO:0016573
"histone acetylation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031505 "fungal-type cell wall
organization" evidence=IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0043709 "cell adhesion involved in single-species
biofilm formation" evidence=IMP] [GO:0044114 "development of
symbiont in host" evidence=IMP] [GO:0044182 "filamentous growth of
a population of unicellular organisms" evidence=IMP] [GO:1900189
"positive regulation of cell adhesion involved in single-species
biofilm formation" evidence=IMP] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00569 Pfam:PF04433 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291 SMART:SM00717
CGD:CAL0000716 GO:GO:0005634 GO:GO:0009405 GO:GO:0043565
GO:GO:0008270 GO:GO:0016573 GO:GO:0003700 GO:GO:0006357
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035690
GO:GO:0031505 eggNOG:COG5114 KO:K11314 InterPro:IPR017884
InterPro:IPR016827 PIRSF:PIRSF025024 PROSITE:PS51293 GO:GO:0010811
GO:GO:0043709 GO:GO:1900189 EMBL:AACQ01000114 EMBL:AACQ01000113
GO:GO:0044182 GO:GO:0044114 GO:GO:0000988 RefSeq:XP_713936.1
RefSeq:XP_713994.1 ProteinModelPortal:Q59WH0 SMR:Q59WH0
STRING:Q59WH0 GeneID:3644385 GeneID:3644450 KEGG:cal:CaO19.2331
KEGG:cal:CaO19.9867 Uniprot:Q59WH0
Length = 445
Score = 124 (48.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 320 YHCNSCSADCSRK-RYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGK 378
+HC+ CS+DC+ + R C D+DLC CF G D ++ +
Sbjct: 8 FHCDVCSSDCTNRIRIQCAICTDYDLCVPCFAAGLTTGDHKPWHDYQIIEQNTYPIFDRD 67
Query: 379 W-TDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFVQMPIE 423
W D+ NW +IA+H+ ++K + H+ ++ +E
Sbjct: 68 WGADEELLLIQGCETSGLGNWADIADHIGNRSKEEVAEHYFKIYLE 113
Score = 42 (19.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 419 QMPIEDMFLDCDDDV-DGNLKETTDD 443
++PI+DM D +D D +LK T D
Sbjct: 186 EIPIKDMVFDPEDSANDIDLKLTILD 211
>DICTYBASE|DDB_G0283391 [details] [associations]
symbol:kinX "protein kinase, TKL group" species:44689
"Dictyostelium discoideum" [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PRINTS:PR00109
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
dictyBase:DDB_G0283391 GO:GO:0005524 GenomeReviews:CM000153_GR
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 EMBL:AAFI02000055
HSSP:O43318 EMBL:Z37981 PIR:S52076 RefSeq:XP_639097.1
ProteinModelPortal:Q23915 EnsemblProtists:DDB0191487 GeneID:8624121
KEGG:ddi:DDB_G0283391 KO:K05743 OMA:PTKVEES Uniprot:Q23915
Length = 1094
Score = 125 (49.1 bits), Expect = 0.00085, P = 0.00085
Identities = 90/419 (21%), Positives = 156/419 (37%)
Query: 456 VAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLK-SEDT 514
VA + E++ + Q Q E +P ++K+ E + K+E DVKVDE+ K E
Sbjct: 646 VANSQETEQQQQQ-QQQPKEEEEEEPTKVEDVKV-ETEEQTKEEHDVKVDEESTKVDEPV 703
Query: 515 SEGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEVG--NPVMALAAFLTLLGGPD 572
E +E+ E + + + E V V E P + EV PV + + P
Sbjct: 704 DEPTKVEESVEQVKAEEPNKVEELVEEVKVEEEPTNVEEVKAEEPVEEVK-----VEEP- 757
Query: 573 LTTASARSSLKSISGNSPAMQLAAKHCFI---LEDPPGDKKEVAHSESIVAEMADRDIQK 629
+ A ++ + P ++ + +E+P +EV E + A+ +Q
Sbjct: 758 VEEVKAEEPVEEVKAEEPVEEVKTEEPVEEVKVEEPV---EEVKVEEPVEEVEAEESVQ- 813
Query: 630 DETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGP 689
E +E++ V E V + + + K+E+ E+ S+ E E+ P
Sbjct: 814 -EPVEEVKVDE--PTKVEEPTKVEEPIEEVKVEEPTKVEE----SIEEVKVEEPTKVEEP 866
Query: 690 ANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKXXXXXXXXXPAPP 749
+ PE EP + E + + K + E + P+K + S + P
Sbjct: 867 VEEIKPE--EPTKVEE--SVEDVKVEDVKVEEVKAEEPTKA-EESVEDVKVEEPIKVEEP 921
Query: 750 VDVE---KDNSLLSDSLPSGKNEPDQRVLSNSVAEP---SPPSKLTNDVDMVSDPQPLEN 803
V VE K + P EP + V EP P K+ V V P+
Sbjct: 922 VKVEEPVKVEEPVKVEEPIKVEEPIKVEEPIKVEEPIKVEEPIKVEEPVK-VEVASPVVQ 980
Query: 804 NEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSE-INEPQQTD-SITGTETARVEDQNR 860
+P +Q + S S PS + +PQQ + + T + + Q +
Sbjct: 981 EQPPQQEEKPEVVSTSTITIASSPQQSSNSPPSTPVKQPQQQEIEVNSTPIKQQQQQQQ 1039
>MGI|MGI:109172 [details] [associations]
symbol:Dspp "dentin sialophosphoprotein" species:10090 "Mus
musculus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0031214
"biomineral tissue development" evidence=IEA] [GO:0071460 "cellular
response to cell-matrix adhesion" evidence=IDA] MGI:MGI:109172
GO:GO:0005578 eggNOG:NOG12793 GO:GO:0031214 HOVERGEN:HBG098252
OrthoDB:EOG41RPVG GO:GO:0071460 EMBL:U67916 EMBL:AJ002141
EMBL:AF135799 IPI:IPI00828889 UniGene:Mm.319832
ProteinModelPortal:P97399 STRING:P97399 PhosphoSite:P97399
PaxDb:P97399 PRIDE:P97399 UCSC:uc008ykd.1 CleanEx:MM_DSPP
Genevestigator:P97399 GermOnline:ENSMUSG00000053268 Uniprot:P97399
Length = 934
Score = 124 (48.7 bits), Expect = 0.00090, P = 0.00090
Identities = 71/450 (15%), Positives = 153/450 (34%)
Query: 428 DCDDDVDGNLKE--TTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDAS 485
D D+D D + E ++DD+ +GD+ ++ D SE K + S SK + +
Sbjct: 491 DDDNDSDSHAGEDDSSDDSSGDGDSDSNGDGDSESEDKDESDSSDHDNSSDSESKSDSSD 550
Query: 486 ELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTH 545
D+S D SD S D+S+ + ++ ++ ++ +
Sbjct: 551 SSDDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNSSSDSSDSSGSSDSSDSSDTCDSS 610
Query: 546 ETPQSFAEVGNPVMALAAFLTLLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDP 605
++ S + + ++ D + +S S S S +S + +
Sbjct: 611 DSSDSSDSSDSSDSSDSS-----DSSDSSDSSDSSDSSSSSDSSDSSSCSDSSDSSDSSD 665
Query: 606 PGDKKEVAHSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSV 665
D + + S S + + ++ + + + + +S D D S+ G DS
Sbjct: 666 SSDSSDSSDSSSSDSSSSSNSSDSSDSSDSSSSSDSSDSS--DSSDSSDSSGSSDSSDSS 723
Query: 666 PEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSI----VE 721
++S + S + + + D+ + E D + S+ D+ S
Sbjct: 724 ASSDSSSSSDSSDSSSSSDSSDSSDSSDSSDSSESSDSSNSSDSSDSSDSSDSSDSSDSS 783
Query: 722 ESNDLPSKVLQSSQKXXXXXXXXXPAPPVDVEKDNSLLSDSLPSGKNEPDQRVLSNSVAE 781
+S+D S + D+S SDS S + +S +
Sbjct: 784 DSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 843
Query: 782 PSPPSKLTNDVDMVSDPQPLENNEPEKQIXXXXXXXXXXXXAPKDVEMVSTSLPSEINEP 841
S S ++D SD ++ + D + S+ ++
Sbjct: 844 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSDSKDSSSDSSDGDSKS 903
Query: 842 QQTDSITGTETARVEDQNRDGQDEKHDSKE 871
+S + +++ D + +G D H + +
Sbjct: 904 GNGNSDSNSDSNSDSDSDSEGSDSNHSTSD 933
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.126 0.358 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1038 900 0.00088 122 3 11 23 0.38 35
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 624 (66 KB)
Total size of DFA: 429 KB (2205 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 100.59u 0.11s 100.70t Elapsed: 00:00:31
Total cpu time: 100.62u 0.11s 100.73t Elapsed: 00:00:32
Start: Tue May 21 13:01:07 2013 End: Tue May 21 13:01:39 2013