Your job contains 1 sequence.
>001649
MTLEDFFSLTKMKDGLTVPSRVEELVGIMQKEKDFVVKNIGDATRQWAVVASALSATENR
DCLDRFIQLDGLGLIDRWLKQVQKFGNNTNEGFVEESITAMMGALEKLHIDYELSVSSGI
WITVKSLLGHSSSQVQDRARALFDSWNQGRVSEALDHDVKCVGFSQDDNTAVSSIQANES
RTESSAIDVPLPQGSVNEENNGAEPSGPEKLPVNSECLQPEKEEDVKTKTDNNELCSHGK
LDDIDMEGKPPDHVATSKLSNSVLENSAMEDKFPEGTVKTISSVEACRSPAPKQCCKEEQ
SDTLKTNEFSKDEKHVPKVSSFPENICEKAFASSSTVESRNVSSAVEVASAHDIMAGSAV
GKHFDTDEGDLDPKDPALGDLRKLASEPKNRMDDVQVINNCSTPMFKPTGEDDDYQSDAM
QDSSGNECTYGKHKDLETSFSRIKDIGAADKDKDHVSDGDSDSRNDFHFSKATMATRNPD
ATNRRESDIELEYGIVDALEVARKVALEYREPSCSSSDKILGGGIRPPESPDSVNEKLDL
ADEVPVKELPTERNYSAEAYPEGEGQLINSDNRVAEPENGIADMDSSQVTEAAREPEVNR
DKGLCDFDLNQEVCSDDMDNPVNPVNHVSTPVSVVSTSRPAVAPGLPVAPLQFEGTLGWK
GTAATSAFRPASPRRISDSDKTTLIVGGANNSSKQRQDCLDIDLNVAESEDEKLADLIPE
KQIPVSSGLQSAESSVEVSPRRSERLNLDLNRISDDSDAPPSDLRMERRLLYNRNGHRSP
SPASSSSSMQPLLRNFDLNDRPFLQNDTPDPGPYHGKSSQSVNPFGLPKPDDPVISIMGA
RVEVNRKEFIPQISCLPNGKSLETAMDGNLARGGGVLGLGPPAAYSNSPLFGYNGFAAAS
TLSYSSPMYGPGSTIPYMVDSRGAPVVPQIVGSAAAVPPSYSQPPPFIVSVAGAPSAITG
PLRPNFDLNSGFPTEGGNRDSLGLRQLFMPGQGRSMEEHLRTSSQPSSSSGAGGKRKEPD
GGWETYSLNYRHQQPPWN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001649
(1038 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135907 - symbol:AT4G24200 species:3702 "Arabi... 790 7.1e-126 2
TAIR|locus:2097915 - symbol:SUO "'shuttle' in chinese" sp... 187 1.9e-27 4
TAIR|locus:2097925 - symbol:AT3G48060 species:3702 "Arabi... 183 1.1e-26 5
>TAIR|locus:2135907 [details] [associations]
symbol:AT4G24200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR017923 PROSITE:PS51319 GO:GO:0005739 GO:GO:0005634
EMBL:CP002687 GO:GO:0003677 GO:GO:0006351 GO:GO:0003746
Gene3D:1.20.930.10 SUPFAM:SSF47676 EMBL:AY064014 EMBL:AY096636
IPI:IPI00525810 RefSeq:NP_194151.2 UniGene:At.22816
ProteinModelPortal:Q8VZM2 SMR:Q8VZM2 PaxDb:Q8VZM2 PRIDE:Q8VZM2
EnsemblPlants:AT4G24200.1 GeneID:828521 KEGG:ath:AT4G24200
eggNOG:NOG244511 InParanoid:Q8VZM2 OMA:TKNEECL
ProtClustDB:CLSN2714365 Genevestigator:Q8VZM2 Uniprot:Q8VZM2
Length = 1000
Score = 790 (283.2 bits), Expect = 7.1e-126, Sum P(2) = 7.1e-126
Identities = 229/691 (33%), Positives = 317/691 (45%)
Query: 349 ASAHDIMAGSAVGKHFDTDEGDLDPKDPALGDLRKLASEPKNRMDDVQVINNCSTPMFKP 408
A+ H ++ ++ + ++ L ++ K S DV V +N S +
Sbjct: 333 AAGHVAVSSDSIVASMELEKNSLLQSSLDSNEVSKNVSGTICGSHDVSVAHN-SKQVSSL 391
Query: 409 TGEDDDYQSDAMQDSSGNECTYGKHKDLETSFSRXXXXXXXXXXXXHVSDGDSDSRNDFH 468
T D+ SD SG G+ + E+ H R
Sbjct: 392 THMTDNQDSDNSSRLSGG---LGRSRKFESDNLTGLADNEGKDDMGHSDKKRRVKRRKKR 448
Query: 469 FSKATMA-TRNPDATNRRESDIELEYGIVDALEVARKVALEYR------EPSCSSSDKIL 521
S +M ++ A ++ +DI+L GI+DALEVA KVA E EPS SSS+++
Sbjct: 449 ISSRSMTISQRLGAIDKTTTDIDL--GILDALEVATKVAQEVAREVDSGEPSHSSSEELS 506
Query: 522 GGGIRPPESPDSVNEKLDLADEVPVKELPTERNYSAEAYPEGEGQLINSDNRVAEPENGI 581
+S + D+ P K L N+S E G+ L+ D + +PE+G
Sbjct: 507 D---ESGQSGSQYSRDDDVHTGSPSKGLSVTENHSFEEPHVGDDDLM--DEKDDKPESG- 560
Query: 582 ADMDSSQVTEAAREPEVNRDKGLCDFDLNQEVCSDDMDNXXXXXXXXXXXXXXXXXXXXX 641
D++ + AA+ EV R+K C FDLNQ++C D+ D
Sbjct: 561 -DVEERHLATAAKS-EVGREKSPCGFDLNQDICPDETD--VIMSSTSTTPAPMSVSFSVS 616
Query: 642 XXXXXXXXXXQFEGTLGWKGTAATSAFRPASPRRISDSDKTTLIVGGANNSSKQRQDCLD 701
E +L KG+AATS F A P ++ D V S+
Sbjct: 617 SSAMPAAAPWHLERSLSGKGSAATSVFHSALPHKVPSGDLREKQV-----ISR------G 665
Query: 702 IDLNVAESEDEKLADLIPEKQIPVSSG-LQXXXXXXXXXXXXXXXLNLDLNRISDDSDAP 760
IDLNVAE D+++ DL P KQ P SS + NLDLN +++D + P
Sbjct: 666 IDLNVAEVGDDQVEDLTPWKQFPFSSSNSRGGESSHEASLRGSSKFNLDLNCMNEDDEMP 725
Query: 761 P-SDLRMERRLLYNRNGHRXXXXXXXXXXMQPLLR--NFDLNDRPFLQNDTPDPGPYHGK 817
P S+ +ME RL + NG + Q + NFDLNDRP D+ D GPY+G+
Sbjct: 726 PPSESKMETRLFLSHNGQQSASPVSSSSVAQQSGKEVNFDLNDRPQFFIDSRDQGPYYGR 785
Query: 818 SSQSVNPFGLPKPDDPVISIMGARVEVNRKEFIPQI-SCLPNGKSLETAMDXXXXXXXXX 876
S +G K ++P ISI+G +VE +RK+ +PQ+ S L NGKSLE A
Sbjct: 786 HPWSTASYGGHKLEEPGISILGTKVEADRKDSVPQMASFLSNGKSLEPATGLHMGRTGNS 845
Query: 877 XXXXXXXXYSNSPLFGYNGFAAASTLSYSSPMYGPGSTIPYMVDSRGAPVV-PQIVGSAA 935
+S +P++GYNG LS SSPMY PG+ IPYMVDSRG PV+ PQI+GSA
Sbjct: 846 LGLAPGVSFSPAPMYGYNGLTGPPGLSMSSPMYVPGTAIPYMVDSRGTPVMMPQIIGSAP 905
Query: 936 AVPPSYSQPPPFIVSVAGAPSAITGPLRPNFDLNSGFPTEGGNRDSLGLRQLFMPGQGRS 995
V P + Q F+ G+PS G +RPNFD NSGF E GNR+SL LRQ P Q +
Sbjct: 906 YVQPPFPQQHMFMSLAGGSPST-NGSMRPNFDQNSGFGLEIGNRESLNLRQFLSPSQSGA 964
Query: 996 MEEH--LRTXXXXXXXXGAGGKRKEPDGGWE 1024
M EH GGKRKEP+ WE
Sbjct: 965 MGEHSGANVEPSSSSSISIGGKRKEPEPRWE 995
Score = 467 (169.5 bits), Expect = 7.1e-126, Sum P(2) = 7.1e-126
Identities = 119/295 (40%), Positives = 168/295 (56%)
Query: 1 MTLEDFFSLTKMKDGLTVPSRVEELVGIMQKEKDFVVKNIGDATRQWAVVASALSATENR 60
MTLEDFF+LT++KDGLTV SRVEELV +MQ KD V+KN GDA RQW VAS ++AT+NR
Sbjct: 1 MTLEDFFTLTEIKDGLTVTSRVEELVSVMQSNKDSVLKNSGDAFRQWTAVASTIAATKNR 60
Query: 61 DCLDRFIQLDGLGLIDRWLKQVQKFGNNTNEGFVEESITAMMGALEKLHIDYELSVSSGI 120
DCLD F+ LDGL + WL + Q N++ + VEESI A++ A+E L +D VSSG+
Sbjct: 61 DCLDVFVNLDGLVYLSSWLAEAQMLDNDSVDRSVEESILALLEAVENLGVDSSKLVSSGL 120
Query: 121 WITVKSLLGHSSSQVQDRARALFDSWNQGRVSEALDHDVK-CVGFSQDDNTAVSSIQANE 179
W+ VK L+ H SS+VQD+AR LF SW + +HD + C +D+ V++ + E
Sbjct: 121 WVAVKKLVDHGSSRVQDQARKLFGSWKDKDDYDHSEHDSESCNKIHEDEMRVVAA--SIE 178
Query: 180 SRTESSAIDVPLPQGSVNEENNGAEPSGPEKLPVNSECLQPEKEEDVKTKTDN------- 232
S + SA+ + Q + E + E + L SE P++++ + + D
Sbjct: 179 SSGQKSAVTLCSMQST--SEKHCPEIADEALLSGCSEGNIPDQDKGLGLQNDKAGFVSNV 236
Query: 233 NELCSHGKLDDIDMEGKPPDHVATSKLSN-SVLENSAM-EDKFPE--GTVKTISS 283
N CS+ + + G D + SV E S+M E P GT+ T SS
Sbjct: 237 NSHCSNSMTETFN--GSCTDDIMKEVQEKLSVKEKSSMGETSGPTTFGTMPTGSS 289
>TAIR|locus:2097915 [details] [associations]
symbol:SUO "'shuttle' in chinese" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0031053 "primary miRNA processing"
evidence=IMP] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IDA]
InterPro:IPR001025 InterPro:IPR003617 InterPro:IPR017923
Pfam:PF01426 Pfam:PF08711 PROSITE:PS51038 PROSITE:PS51319
SMART:SM00439 SMART:SM00509 GO:GO:0005634 EMBL:CP002686
GO:GO:0003677 GO:GO:0006351 GO:GO:0000932 GO:GO:0035278
Gene3D:1.20.930.10 SUPFAM:SSF47676 IPI:IPI00524563
RefSeq:NP_190388.2 RefSeq:NP_850669.2 UniGene:At.19774 PRIDE:F4JCS8
EnsemblPlants:AT3G48050.1 EnsemblPlants:AT3G48050.2 GeneID:823960
KEGG:ath:AT3G48050 OMA:DVNTESW ArrayExpress:F4JCS8 Uniprot:F4JCS8
Length = 1613
Score = 187 (70.9 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 49/150 (32%), Positives = 83/150 (55%)
Query: 13 KDGLTVPSRVEELVGIMQKEKDFVVKNIGDATRQWAVVASALSATENRDCLDRFIQLDGL 72
K GL VE+LV +M E++ K I R A++A ++AT+ DCL RF+QL GL
Sbjct: 270 KGGLVDSEGVEKLVQLMLPERN--EKKIDLVGR--AILAGVVAATDKFDCLSRFVQLRGL 325
Query: 73 GLIDRWLKQVQK--FGNN----TNEGFVEESITAMMGALEKLHIDYELSVSSGIWITVKS 126
+ D WL++V K G+ ++ V++ + ++ AL+KL ++ + I +V
Sbjct: 326 PVFDEWLQEVHKGKVGDGGSPKDSDRLVDDFLLVLLRALDKLPVNLNALQTCNIGKSVNH 385
Query: 127 LLGHSSSQVQDRARALFDSWNQGRVSEALD 156
L H +S++ +AR+L D+W + RV +D
Sbjct: 386 LRSHKNSEIGKKARSLVDTWKK-RVEAEMD 414
Score = 143 (55.4 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 58/201 (28%), Positives = 85/201 (42%)
Query: 654 EGTLGWKGTAATSAFRPASPRRISD---SDKTTLIVGGANNSSKQRQDCLDIDLNVAESE 710
+G +GW+G+AATSAFRPA PR+ D S T + ++ KQ + LD DLNV +
Sbjct: 1204 KGAVGWRGSAATSAFRPAEPRKPQDVLLSINNTSTSDASTSAGKQTRTFLDFDLNVPD-- 1261
Query: 711 DEKLADLIPEKQ---------IPVSSGLQXXXXXXXXXXXXXXXLNLDLNRISDDSDAPP 761
+ L DL ++ I S L+LDLN++ D +D
Sbjct: 1262 ERVLEDLASQRSGNPTNCTSDITNSFDQVRSGVMGSALDHSSGGLDLDLNKVDDSTDMIS 1321
Query: 762 SDLRMERRLLYNRNGHRXXXXXXXXXXMQPLLRNFDLNDRPFLQNDTPDPGPYHGKSSQS 821
+ RL + + + R+FDLND P + +P + S+S
Sbjct: 1322 YTMNSSHRL--DSSFQQVKLPSTGGR------RDFDLNDGPVGDDAAVEPSMVLNQHSRS 1373
Query: 822 VNPFGLPKPDDPVISIMGARV 842
GLP P S+ G RV
Sbjct: 1374 ----GLPS--QP--SLSGIRV 1386
Score = 120 (47.3 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 48/153 (31%), Positives = 66/153 (43%)
Query: 888 SPLFGYNGFAAASTLSYSSPMYGPGSTIPYM-VDSRGAPVVP----QIVGSAAAVPPSYS 942
S F Y F ++ +S + PG++ +M S G P QI+G VP +Y
Sbjct: 1462 STTFQYPVFPFGNSFPVTSANF-PGASTAHMDSSSSGRACFPGVNSQILGPGVPVPSNY- 1519
Query: 943 QPPPFIVSV--AGAPSAI--TGP--LRPNFDLNSG---FPTEGGNRDSLGLRQLFMPGQG 993
P P+IV + G+ + G R DLNSG TEG + +L RQL
Sbjct: 1520 -PRPYIVGLPNGGSNGGVLDNGAKWFRSGLDLNSGPGGHETEGRDESTLVARQLSSSASL 1578
Query: 994 RSMEEHLRTXXXXXXXXGAGGKRKEPDGGWETY 1026
E+ R G KRKEP+GGW+ Y
Sbjct: 1579 PLKEDQARMYQMS----GGVLKRKEPEGGWDGY 1607
Score = 55 (24.4 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 27/83 (32%), Positives = 34/83 (40%)
Query: 164 FSQDDNTAVSSIQANESRTESSAIDVPLPQGSVNE-----ENNGAEP----SG---PEKL 211
FS N I + S T ++VPL +GS N+ N G P SG +
Sbjct: 587 FSSHRNVPSEKI-SQSSLTSEKTLEVPLTEGSGNKLIVKLPNRGRSPAQSVSGGSLEDPA 645
Query: 212 PVNSECLQPEKEEDVKTKT-DNN 233
PVNS P VK + DNN
Sbjct: 646 PVNSRVSSPVHA--VKQELCDNN 666
Score = 55 (24.4 bits), Expect = 2.9e-13, Sum P(4) = 2.9e-13
Identities = 31/138 (22%), Positives = 60/138 (43%)
Query: 89 TNEGFVEESITAMMGALEKLHIDYELSVSSGIWITVKSLLGHSSSQVQDRARAL--FDSW 146
T++ ++++ + L K + ++ G + KS+ ++SQ +D + F S
Sbjct: 164 TDQDYIDDRQLEVDKLLCKTRSEMHTTLQQG-GRSPKSMNSPTTSQPKDGIQNSNSFLSQ 222
Query: 147 NQGRVSEALDHDVKCVGFSQDDNTAVSSIQANESRTESSAIDVPLPQGSVNEENNGAEPS 206
+GR E +DH + V ++ ++ V + RTES L E+ +
Sbjct: 223 GKGRKRERMDHGSESV--KRERSSRVDDSGSGPLRTESGLKSEIL---KFTEKGGLVDSE 277
Query: 207 GPEKLPVNSECLQPEKEE 224
G EKL + + PE+ E
Sbjct: 278 GVEKLV---QLMLPERNE 292
Score = 49 (22.3 bits), Expect = 2.7e-26, Sum P(5) = 2.7e-26
Identities = 36/142 (25%), Positives = 52/142 (36%)
Query: 253 HVATSKLSNSVLENS-AMEDKFPEGTV-KTISSV-EACRSPAPKQCCKEEQSDTLKTNEF 309
+V + K+S S L + +E EG+ K I + RSPA + D N
Sbjct: 592 NVPSEKISQSSLTSEKTLEVPLTEGSGNKLIVKLPNRGRSPA-QSVSGGSLEDPAPVNSR 650
Query: 310 SKDEKHVPKVSSFPENICEKAFAXXXXXXXXXXXXAVEVASAHDIMAGS--AVGKHFDT- 366
H K N EK + + + DI+ GS A G
Sbjct: 651 VSSPVHAVKQELCDNNGREKNHSYRPNVSSVLNAESWQSNELKDILTGSQEAAGSPLVAG 710
Query: 367 DE--GDLDPKDPALGDLRKLAS 386
DE GDL D A G+++ +S
Sbjct: 711 DERGGDLKDSDKASGNVKGTSS 732
Score = 48 (22.0 bits), Expect = 2.1e-16, Sum P(6) = 2.1e-16
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 570 SDNRVAEPENGIADMDSS--QVTEAAREPEVNRDKGLCDFDLNQEVCSDDM 618
+ R P N +D+ +S QV ++ G D DLN+ S DM
Sbjct: 1269 ASQRSGNPTNCTSDITNSFDQVRSGVMGSALDHSSGGLDLDLNKVDDSTDM 1319
Score = 41 (19.5 bits), Expect = 1.0e-15, Sum P(6) = 1.0e-15
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 572 NRVAEPENGIA-DMDSSQVTEAA-REPEVNRDKGLCDFDLNQEVCSDD 617
N+V + + I+ M+SS +++ ++ ++ G DFDLN DD
Sbjct: 1311 NKVDDSTDMISYTMNSSHRLDSSFQQVKLPSTGGRRDFDLNDGPVGDD 1358
Score = 41 (19.5 bits), Expect = 5.1e-08, Sum P(5) = 5.1e-08
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 950 SVAGAPSAITG-PLRPNFDLNSGF 972
SV+ A SA + R FDLN GF
Sbjct: 1116 SVSAAASAGSEMDARVEFDLNEGF 1139
Score = 40 (19.1 bits), Expect = 2.5e-08, Sum P(4) = 2.5e-08
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 894 NGFAAASTLSYSSPMYGPGSTIPYMVDSRGAPVVPQIVGSAAAVPPSYSQPPPFI 948
N F+ + L+ +P+ P T+P+ PV P G+ A++ + + PF+
Sbjct: 1150 NNFSGSVFLT-PTPLQ-PVKTLPF-------PVAPVSSGTRASITVAAAAKGPFV 1195
Score = 39 (18.8 bits), Expect = 2.7e-26, Sum P(5) = 2.7e-26
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 200 NNGAEPSG--PEKLPVNSECLQPEKEEDVKTKTDNNELC 236
++G SG E +S L K VK + +NN C
Sbjct: 430 SHGGRHSGGSAEANKTSSSHLHASKSVSVKQQVENNLKC 468
Score = 37 (18.1 bits), Expect = 2.1e-16, Sum P(6) = 2.1e-16
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 386 SEPKNRMDDVQVINNCST 403
+EP+ D + INN ST
Sbjct: 1221 AEPRKPQDVLLSINNTST 1238
Score = 37 (18.1 bits), Expect = 5.1e-08, Sum P(5) = 5.1e-08
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 924 APVVPQIVGSAAAVPPSYSQPPPFIVS 950
A V + + PS SQPP +++
Sbjct: 779 ASVAADEMSKSPVASPSVSQPPNSVMN 805
>TAIR|locus:2097925 [details] [associations]
symbol:AT3G48060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001025 InterPro:IPR003617
InterPro:IPR017923 Pfam:PF01426 Pfam:PF08711 PROSITE:PS51038
PROSITE:PS51319 SMART:SM00439 SMART:SM00509 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0006351
EMBL:AL049658 Gene3D:1.20.930.10 SUPFAM:SSF47676 UniGene:At.19774
IPI:IPI00534352 PIR:T06677 RefSeq:NP_190389.1 UniGene:At.48751
ProteinModelPortal:Q9SU69 SMR:Q9SU69 STRING:Q9SU69 PaxDb:Q9SU69
PRIDE:Q9SU69 EnsemblPlants:AT3G48060.1 GeneID:823961
KEGG:ath:AT3G48060 TAIR:At3g48060 eggNOG:NOG298939
HOGENOM:HOG000083288 InParanoid:Q9SU69 OMA:TERVECL PhylomeDB:Q9SU69
ProtClustDB:CLSN2684022 Genevestigator:Q9SU69 Uniprot:Q9SU69
Length = 1611
Score = 183 (69.5 bits), Expect = 1.1e-26, Sum P(5) = 1.1e-26
Identities = 49/150 (32%), Positives = 82/150 (54%)
Query: 13 KDGLTVPSRVEELVGIMQKEKDFVVKNIGDATRQWAVVASALSATENRDCLDRFIQLDGL 72
K GL VE+LV +M E++ K I R A++A ++AT DCL RF+QL GL
Sbjct: 270 KGGLVDSEGVEKLVQLMLPERN--EKKIDLVGR--AILAGFVAATNRFDCLSRFVQLRGL 325
Query: 73 GLIDRWLKQVQK--FGNN----TNEGFVEESITAMMGALEKLHIDYELSVSSGIWITVKS 126
+ D WL++V K G+ ++ V++ + ++ AL+KL ++ + I +V
Sbjct: 326 PVFDEWLQEVHKGKVGDGGSPKDSDRLVDDFLLVLLRALDKLPVNLNALQTCNIGKSVNH 385
Query: 127 LLGHSSSQVQDRARALFDSWNQGRVSEALD 156
L H +S++ +AR+L D+W + RV +D
Sbjct: 386 LRSHKNSEIGKKARSLVDTWKK-RVEAEMD 414
Score = 147 (56.8 bits), Expect = 1.1e-26, Sum P(5) = 1.1e-26
Identities = 58/201 (28%), Positives = 88/201 (43%)
Query: 652 QFEGTLGWKGTAATSAFRPASPRRISD---SDKTTLIVGGANNSSKQRQDCLDIDLNVAE 708
+++G +GW+G+AATSAFRPA PR+ D S T + ++ KQ + LD DLNV +
Sbjct: 1204 RYKGAVGWRGSAATSAFRPAEPRKAQDVLLSINNTSTSDASTSAGKQTRTFLDFDLNVPD 1263
Query: 709 SEDEKLADLIPEKQ-IPVS--SGL----QXXXXXXXXXXXXXXXLNLDLNRISDDSDAPP 761
+ L DL ++ P + SG+ LDLN++ D +D
Sbjct: 1264 --ERVLEDLASQRSGNPTNCTSGITNNFDQVRSGVMGSALDHSSGGLDLNKVDDLTDMNS 1321
Query: 762 SDLRMERRLLYNRNGHRXXXXXXXXXXMQPLLRNFDLNDRPFLQNDTPDPGPYHGKSSQS 821
+ RL + + + R+FDLND P + +P + S+S
Sbjct: 1322 YTMNSSHRL--DSSFQQVKLPSTGGR------RDFDLNDGPVGDDAAVEPSMVLNQHSRS 1373
Query: 822 VNPFGLPKPDDPVISIMGARV 842
GLP P S+ G RV
Sbjct: 1374 ----GLPS--QP--SLSGIRV 1386
Score = 121 (47.7 bits), Expect = 1.1e-26, Sum P(5) = 1.1e-26
Identities = 48/153 (31%), Positives = 65/153 (42%)
Query: 888 SPLFGYNGFAAASTLSYSSPMYGPGSTIPYM-VDSRGAPVVP----QIVGSAAAVPPSYS 942
S F Y F ++ + P PG++ +M S G P QI+G VP +Y
Sbjct: 1462 STTFQYPVFPFGNSFPVT-PANFPGASTAHMDSSSSGRAYFPGVNSQILGPGVPVPSNY- 1519
Query: 943 QPPPFIVSV--AGAPSAITGP----LRPNFDLNSG---FPTEGGNRDSLGLRQLFMPGQG 993
P P+IV + G+ + R DLNSG TEG + +L RQL
Sbjct: 1520 -PRPYIVGLPNGGSNGGVLDNSAKWFRSGLDLNSGPGGHETEGRDESTLVSRQLSSSASV 1578
Query: 994 RSMEEHLRTXXXXXXXXGAGGKRKEPDGGWETY 1026
S E+ R G KRKEP+GGW+ Y
Sbjct: 1579 PSKEDQARMYQMS----GGVLKRKEPEGGWDGY 1607
Score = 62 (26.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 30/111 (27%), Positives = 49/111 (44%)
Query: 87 NNTNEGFVEESITAMMGALEKLHIDYELSVSSGIWITVKSLLGHSSSQVQDRARAL---F 143
NNT+ + S +A G + +D++L+V ++ L S + + F
Sbjct: 1236 NNTSTS--DASTSA--GKQTRTFLDFDLNVPDER--VLEDLASQRSGNPTNCTSGITNNF 1289
Query: 144 DSWNQGRVSEALDHDVKCVGFSQ-DDNTAVSSIQANES-RTESSAIDVPLP 192
D G + ALDH + ++ DD T ++S N S R +SS V LP
Sbjct: 1290 DQVRSGVMGSALDHSSGGLDLNKVDDLTDMNSYTMNSSHRLDSSFQQVKLP 1340
Score = 54 (24.1 bits), Expect = 1.4e-09, Sum P(4) = 1.4e-09
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 894 NGFAAASTLSYSSPMYGPGSTIPYMVDSRGAPV---VPQIVGSAAAVPPSYSQPPPFIVS 950
N F+ + L+ +P+ P +T+P+ V APV +P + AAAV + PP ++
Sbjct: 1152 NNFSGSVVLT-PTPLQ-PVNTLPFPV----APVSSGIPASITVAAAVKGPFV-PPEDLLR 1204
Query: 951 VAGAP----SAITGPLRP 964
GA SA T RP
Sbjct: 1205 YKGAVGWRGSAATSAFRP 1222
Score = 48 (22.0 bits), Expect = 1.1e-26, Sum P(5) = 1.1e-26
Identities = 26/82 (31%), Positives = 33/82 (40%)
Query: 164 FSQDDNTAVSSIQANESRTESSAIDVPLPQGSVNEE----NNGAEP----SG---PEKLP 212
FS N I + S T ++VPL +GS N+ G P SG + P
Sbjct: 587 FSSHRNVPSEKI-SQSSLTSEKTLEVPLTEGSGNKLIVKLPRGRSPAQSVSGGSLEDPAP 645
Query: 213 VNSECLQPEKEEDVKTKT-DNN 233
VNS P VK + DNN
Sbjct: 646 VNSRVSSPV--HTVKQELCDNN 665
Score = 46 (21.3 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 950 SVAGAPSAITGP---LRPNFDLNSGF 972
SV+ A SA G R FDLN GF
Sbjct: 1116 SVSAAASASAGSEMDARVEFDLNEGF 1141
Score = 46 (21.3 bits), Expect = 8.4e-09, Sum P(4) = 8.4e-09
Identities = 32/148 (21%), Positives = 51/148 (34%)
Query: 794 RNFDLNDRPFLQNDTPDPGPYHGKSSQSVNPFGLPKPDDPVISIMGARVEVNRKEFIPQI 853
R+FDLND P + +P + S+S GLP P S+ G RV N +
Sbjct: 1346 RDFDLNDGPVGDDAAVEPSMVLNQHSRS----GLPS--QP--SLSGIRV--NGENMASFS 1395
Query: 854 SCLPNGKSLETAMDXXXXXXXXXXXXXXXXXYSNSPLFG-YNGFAAASTLSYSSPMYGPG 912
+ P + + G G ++ S Y P+
Sbjct: 1396 TWFPAANAYSAVSMPPIMPERGDQPFPMIATRGPQRMLGPTTGVSSFSPEGYRGPVLSSS 1455
Query: 913 STIPYMVDSRGAPVVPQIVGSAAAVPPS 940
+P+ + PV P G++ V P+
Sbjct: 1456 PAMPFQSTTFQYPVFP--FGNSFPVTPA 1481
Score = 43 (20.2 bits), Expect = 1.1e-26, Sum P(5) = 1.1e-26
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 582 ADMDSSQVTEAAREPEVNRDKGLCDFDLNQEVCSDD 617
A D+S V+ AA + +FDLN+ DD
Sbjct: 1110 AARDASSVSAAASASAGSEMDARVEFDLNEGFDGDD 1145
Score = 39 (18.8 bits), Expect = 9.0e-26, Sum P(5) = 9.0e-26
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 200 NNGAEPSG--PEKLPVNSECLQPEKEEDVKTKTDNNELC 236
++G SG E +S L K VK + +NN C
Sbjct: 430 SHGGRHSGGSAEANKTSSSHLHASKSVSVKQQVENNLKC 468
Score = 39 (18.8 bits), Expect = 4.1e-08, Sum P(4) = 4.1e-08
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 802 PFLQNDTPDPGPYHGKSSQSVNPFGLPKPDDPVIS--IMGARVEVNRKEFIPQISCLPNG 859
PF + P + G S+ ++ + P ++ I+G V V P I LPNG
Sbjct: 1471 PFGNSFPVTPANFPGASTAHMDSSSSGRAYFPGVNSQILGPGVPVPSNYPRPYIVGLPNG 1530
Query: 860 KSLETAMD 867
S +D
Sbjct: 1531 GSNGGVLD 1538
Score = 38 (18.4 bits), Expect = 2.8e-15, Sum P(5) = 2.8e-15
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 386 SEPKNRMDDVQVINNCST 403
+EP+ D + INN ST
Sbjct: 1223 AEPRKAQDVLLSINNTST 1240
Score = 38 (18.4 bits), Expect = 2.8e-15, Sum P(5) = 2.8e-15
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 584 MDSSQVTEAA-REPEVNRDKGLCDFDLNQEVCSDD 617
M+SS +++ ++ ++ G DFDLN DD
Sbjct: 1324 MNSSHRLDSSFQQVKLPSTGGRRDFDLNDGPVGDD 1358
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.130 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1038 933 0.00092 122 3 11 23 0.49 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 621 (66 KB)
Total size of DFA: 444 KB (2210 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 96.81u 0.14s 96.95t Elapsed: 00:00:05
Total cpu time: 96.81u 0.14s 96.95t Elapsed: 00:00:05
Start: Tue May 21 13:07:14 2013 End: Tue May 21 13:07:19 2013