BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001656
(1036 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255574578|ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative [Ricinus
communis]
gi|223532412|gb|EEF34207.1| regulator of telomere elongation helicase 1 rtel1, putative [Ricinus
communis]
Length = 1049
Score = 1408 bits (3644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 692/1038 (66%), Positives = 815/1038 (78%), Gaps = 38/1038 (3%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MPTYKIRGIDV+FP+EAYDCQLVYMEKVIQSLQ++CNALLESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPTYKIRGIDVDFPYEAYDCQLVYMEKVIQSLQSRCNALLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSS-VNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY 119
KSLG F+T + N + +GS+S S S + LPTI+YTSRTHSQLRQV+QELK S+Y
Sbjct: 61 KSLGPFTTGKIERNGRTAGSKSDDTPPSPSEGTALPTIVYTSRTHSQLRQVVQELKRSSY 120
Query: 120 RPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLG 179
RPKMVILGSREQLCIH EVSLLRG AQ NAC ++CK+ R+C H +RV+DY++ NPHLG
Sbjct: 121 RPKMVILGSREQLCIHDEVSLLRGKAQTNACHYVCKRREKRQCTHFARVSDYVRKNPHLG 180
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
DEP+DIEDLV +GR FGPCPY+++REL K VDI+FAPYNYLID +RK L ++W SILI
Sbjct: 181 DEPVDIEDLVKMGRRFGPCPYYVSRELHKVVDILFAPYNYLIDRSYRKSLKIDWDKSILI 240
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
FDEAHNLE +CADAASFDLSSGLLTACISEAK+CI++S RR S+D++ NPDNFAIL+A
Sbjct: 241 FDEAHNLESLCADAASFDLSSGLLTACISEAKSCIELSVARREDSNDKSRNPDNFAILKA 300
Query: 300 LLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK 359
+LLKLEKRIAEVPI SK+LGFT+PGPYIYELLADL+IT ETA KL DI+E AA LL+EDK
Sbjct: 301 ILLKLEKRIAEVPIESKDLGFTRPGPYIYELLADLHITHETATKLTDIIEEAALLLEEDK 360
Query: 360 LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWW 419
QN T CR+ES+ +I KIIFR+K AH+ +YRVHV+E +A+A+D L+GKASRTLSWW
Sbjct: 361 -QNTAKGTVCRLESMGDIFKIIFREKSNAHANFYRVHVQEVEASASDSLRGKASRTLSWW 419
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIV 479
CFNPG+AM+EFSR+ V SIILTSGTLSPMDSFAQELKL+FP+R+ENPHVI+SKQIWAG+V
Sbjct: 420 CFNPGVAMEEFSRMGVCSIILTSGTLSPMDSFAQELKLDFPIRLENPHVISSKQIWAGVV 479
Query: 480 PVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNT 539
PVGPSG NSSYRNRDS+EYKQELGN IVN ARIVPDGLL+FFPSYYL+DQCI CWKN
Sbjct: 480 PVGPSGRSFNSSYRNRDSLEYKQELGNAIVNFARIVPDGLLVFFPSYYLLDQCIGCWKNV 539
Query: 540 SHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEG 599
+H + TTIWERICKHK+PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEG
Sbjct: 540 THASSTTIWERICKHKQPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEG 599
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQ 659
LDFADH GRAV+I GMPF + DPKVRLKRE+LD Q Q YK L+GE WY Q
Sbjct: 600 LDFADHTGRAVMIIGMPFPSRNDPKVRLKREFLDEQLCLQRDAYKS---QLLTGESWYTQ 656
Query: 660 QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTL 719
QASRAVNQAVGRVIRHRHDYGAIIFCDERFAH + +SQISLWIQPHI+C+SKFGDVV+TL
Sbjct: 657 QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHSNSQSQISLWIQPHIKCHSKFGDVVFTL 716
Query: 720 TRFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAVDQA-----CY 774
+RFFR+ G T LK IK E +VRE+K +DK L+ S+ DQ+
Sbjct: 717 SRFFRD----GPTKLKTIKIEDMENVREMKTTQPIDKFYLDGFLSTPTPQDQSPGVKLSS 772
Query: 775 SLHEVKNRNTSSHSGEIVPANRSSLSPYKGIWASELKNSSDLIQFEKKLLLSGRKSIQYR 834
SL +V+ S E++PANRSSL+ +K + K SS LI EK LL+SGRK IQ
Sbjct: 773 SLLKVRGGKESKQLQEVLPANRSSLTTFKENHDFKPKFSSGLIHKEKILLISGRKDIQCE 832
Query: 835 DHEFIDLTSNSSLHAKPRKEELIAPCSTKKRKVLISESDQMQCVKKISEIASDAESSQPS 894
+HE IDLT S L P +E L+ P S KKR+ L S+ D M +IA+ E + S
Sbjct: 833 NHEIIDLTEKSILDEMPSRENLLVPYSAKKRRGLNSKHDIM------GQIANSQEHASSS 886
Query: 895 SFIPITNKVKHEKPQISDSGSRIIAQGSAPSKVDGTTYRIEAEIQSEKSKGSHSSAPPCG 954
K + Q+ + PS G T +++ E+ ++KSKG ++ PC
Sbjct: 887 ---------KRQNAQVV---------SALPSNDRGITRKVDTELLTQKSKGVQTTLVPCS 928
Query: 955 GEETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAKLFAGPERLPLLR 1014
EE +GSAFLIQV+EKL+A EYKEFVGFMKA+KSKAM+I VL+SI KLF+GP+R PLL+
Sbjct: 929 DEEKRGSAFLIQVKEKLTAAEYKEFVGFMKALKSKAMQIGSVLESIVKLFSGPDRFPLLK 988
Query: 1015 RFKDYVPAKYHPLYEQYL 1032
RFKDY+PAKYH LYE YL
Sbjct: 989 RFKDYIPAKYHSLYEHYL 1006
>gi|359482607|ref|XP_002279773.2| PREDICTED: regulator of telomere elongation helicase 1-like [Vitis
vinifera]
Length = 1084
Score = 1394 bits (3609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/1052 (66%), Positives = 825/1052 (78%), Gaps = 22/1052 (2%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP YKIRGIDV+FPFEAYDCQLVYMEKVIQSLQ +CNALLESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPIYKIRGIDVDFPFEAYDCQLVYMEKVIQSLQERCNALLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQ-SSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY 119
KSLG FST S+ N QI GSQ S V SQS + LPTI+Y SRTHSQLRQVIQELK ++Y
Sbjct: 61 KSLGGFSTGRSEWNGQIMGSQHSDVPHSQSAKTNLPTIIYASRTHSQLRQVIQELKRTSY 120
Query: 120 RPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNR-RCNHHSRVADYMKNNPHL 178
RPKMV+LGSREQLCIH EVSLLRG AQ NAC LC+K T + C H+SRV+D+MK NP L
Sbjct: 121 RPKMVVLGSREQLCIHEEVSLLRGRAQTNACHSLCRKRTKKGYCGHYSRVSDFMKYNPGL 180
Query: 179 GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSIL 238
GD+PIDIEDLVNIGR+ GPCPY+++REL K VDI+FAPYNYLID RK L V W NSIL
Sbjct: 181 GDDPIDIEDLVNIGRSNGPCPYYVSRELHKVVDILFAPYNYLIDRGNRKSLSVCWNNSIL 240
Query: 239 IFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG--QSSDETLNPDNFAI 296
IFDEAHNLEG+CADAASFDL S LLTACISEAKNC+D+S +RR +++D++ NPDNFAI
Sbjct: 241 IFDEAHNLEGLCADAASFDLPSWLLTACISEAKNCVDLSISRREIEKANDKSCNPDNFAI 300
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
LRALLLKLEK+IAEVPI SKELGFT+PGPYIYELLADLNIT +TA LIDI+E AA LL+
Sbjct: 301 LRALLLKLEKQIAEVPIESKELGFTRPGPYIYELLADLNITHKTATMLIDIIEEAALLLE 360
Query: 357 EDK--LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASR 414
ED + K +T CR+E++S+ILKIIFRD G AH+ +YRVHV+E +ANAAD LKGKASR
Sbjct: 361 EDAKGVAQKTKSTICRLETMSDILKIIFRDGGNAHAKFYRVHVQEVEANAADALKGKASR 420
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
TLSWWCFNPGIAMQEF+ L V SIILTSGTLSP++SFAQELKL FP+R+ENPHVI+S QI
Sbjct: 421 TLSWWCFNPGIAMQEFAVLGVSSIILTSGTLSPLESFAQELKLEFPVRLENPHVISSNQI 480
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
WAG+VP GPSG NSSYR RDS+EYKQELGN IVN ARIVPDGLL+FFPSYY+++QC+
Sbjct: 481 WAGVVPAGPSGCSFNSSYRTRDSLEYKQELGNAIVNFARIVPDGLLVFFPSYYILEQCVG 540
Query: 535 CWKNTSHGNLT---TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
CWKN SH N T TIWERICKHK+PV+EPRQSSLFP +IEDYM KLKD+S SGAVFFAV
Sbjct: 541 CWKNKSHANSTNSSTIWERICKHKQPVIEPRQSSLFPSSIEDYMNKLKDSSMSGAVFFAV 600
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
CRGKVSEGLDFADHAGRAVVITG+PFA TDPKVRLKRE+LD + SQ K + L
Sbjct: 601 CRGKVSEGLDFADHAGRAVVITGIPFAMRTDPKVRLKREFLDQRGLSQKEGCKTLPIQVL 660
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
+GE+WY QQASRAVNQAVGRVIRH HD+GAIIFCDERFAHP+R+SQISLWIQPHI+CYSK
Sbjct: 661 TGEEWYTQQASRAVNQAVGRVIRHCHDFGAIIFCDERFAHPNRQSQISLWIQPHIKCYSK 720
Query: 712 FGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTP---A 768
FGDVV+TLTRFFR+ G LK + E GDV E+K L++ S EE S TP +
Sbjct: 721 FGDVVFTLTRFFRDAGTHGPPQLK-SRAEDRGDVNEMKIAKPLER-SYEE-NSLTPLTIS 777
Query: 769 VDQACY-----SLHEVKNRNTSSHSGEIVPANRSSLSPYKGIWASELKNSSDLIQFEKKL 823
+D+ + S+ E K N SS G ++PANRSSL+PY+ + L + SDL +K L
Sbjct: 778 MDKDKFVKPLSSVLEAKRGNFSSQLGGVLPANRSSLTPYEQNQSLTLSSPSDLFSKKKSL 837
Query: 824 LLSGRKSIQYRDHEFIDLTSNSSLHAKPRKEELIAPCSTKKRKVLISESDQMQCVKKISE 883
L+ GRK +Q + E ++S L KP KEE++ C+ KKR++ + D MQ +
Sbjct: 838 LIPGRKIMQCSNSEMPYSFNSSLLGEKPSKEEVLVTCTAKKRRIAKLDPDAMQNFEMSHH 897
Query: 884 IASDAESSQPSSFIPITNKVKHEKPQISDSGSRIIAQGSAPSKVDGTTYRIEAEIQSEKS 943
+++Q + + + VKH+ Q+ D +R GSA D + + +AE S+K
Sbjct: 898 HPFMVKNAQSNDHL-ANHSVKHDNSQLPDGTNRETQVGSAMLLEDDSPKK-DAEFLSQKG 955
Query: 944 KGSHSSAPPCGGEETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAKL 1003
KG SS PC +ET+GSAFLIQVQEKLS EYKEFVGFMKA+KSKAMKI VL+SIA+L
Sbjct: 956 KGVQSSPLPCSVKETRGSAFLIQVQEKLSTAEYKEFVGFMKALKSKAMKIGQVLESIARL 1015
Query: 1004 FAGPERLPLLRRFKDYVPAKYHPLYEQYLMNN 1035
F+GPERLPLL+RFKDY+PAKY LY+QYL NN
Sbjct: 1016 FSGPERLPLLKRFKDYIPAKYQSLYQQYLKNN 1047
>gi|449448190|ref|XP_004141849.1| PREDICTED: regulator of telomere elongation helicase 1-like [Cucumis
sativus]
Length = 1054
Score = 1309 bits (3388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/1062 (62%), Positives = 796/1062 (74%), Gaps = 42/1062 (3%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRGIDV+FPF+AYDCQLVYMEKVIQSLQ KCNALLESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPRYTIRGIDVDFPFDAYDCQLVYMEKVIQSLQEKCNALLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
KSLG FS+ S N+Q +V SSQS K PTI+YT+RTHSQLRQVIQELK ++YR
Sbjct: 61 KSLGEFSSGRSVSNSQNIEGDPNVLSSQSTSPKHPTIVYTTRTHSQLRQVIQELKKTSYR 120
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
PKMV+LGSREQLCIH +VSLLRG QNNACR LC+K R C H++RV+ Y+K NPHLGD
Sbjct: 121 PKMVVLGSREQLCIHEDVSLLRGRTQNNACRSLCRKSGKRHCKHYNRVSGYVKENPHLGD 180
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
EPIDIEDLV IG++FGPCPY+++REL K VDI+FAPYNYLID +RK L +EWKNS+LIF
Sbjct: 181 EPIDIEDLVKIGKSFGPCPYYVSRELHKAVDIMFAPYNYLIDRGYRKSLVLEWKNSVLIF 240
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHNLE ICADAASFDL+S LLTACISEAKNCID+S RR +S+D++ NPDNFAILRAL
Sbjct: 241 DEAHNLESICADAASFDLTSWLLTACISEAKNCIDLSIKRRDESNDKSGNPDNFAILRAL 300
Query: 301 LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
LLKLEK I+++PI+SKELGFTKPGPYIYELLA+LNIT E+A KL I+E AA LL+EDK
Sbjct: 301 LLKLEKGISDIPIHSKELGFTKPGPYIYELLAELNITHESASKLKGIIEEAAILLEEDK- 359
Query: 361 QNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWC 420
Q K T CR+E+I++IL I+FR+K AH+ +Y+VHV+E +A+A D LKGKASRTLSWWC
Sbjct: 360 QQKIQNTGCRLENITDILDIVFREKDNAHAKFYQVHVQENEASAMDGLKGKASRTLSWWC 419
Query: 421 FNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP 480
FNPGIA++ F + EVGSIILTSGTLSP+DSFAQELKL+FP+R+ENPHVI+S QIWAG+V
Sbjct: 420 FNPGIALEAFPKKEVGSIILTSGTLSPLDSFAQELKLDFPIRLENPHVISSNQIWAGVVS 479
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
VGPSG NSSY NR+S YK +LGN IVN ARIVPDGLL+FFPSYY +DQCI+CWKN S
Sbjct: 480 VGPSGCSFNSSYWNRESEAYKLDLGNAIVNFARIVPDGLLVFFPSYYFLDQCISCWKNQS 539
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
+ TTIWERI KHKKPV+EPRQSSLFP +IEDYM KL+DTS+SGAVFFAVCRGKVSEGL
Sbjct: 540 LSSSTTIWERISKHKKPVIEPRQSSLFPSSIEDYMFKLEDTSSSGAVFFAVCRGKVSEGL 599
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DFADHAGRAV+ITGMPFA+ DPKVRLKR YLD Q+QSQ G + ++GEDWY QQ
Sbjct: 600 DFADHAGRAVIITGMPFASRNDPKVRLKRGYLDHQSQSQRGNCQ-----IMTGEDWYTQQ 654
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLT 720
A RAVNQAVGRVIRHRHDYGAIIFCDERFAH SR+SQIS+WIQPHI+CYSKFGDVVYTLT
Sbjct: 655 AMRAVNQAVGRVIRHRHDYGAIIFCDERFAHSSRQSQISVWIQPHIKCYSKFGDVVYTLT 714
Query: 721 RFFREE--RICGSTNLKLIKTEVSG--------------------DVRELKPVDLLDKIS 758
RFFR + RIC K + G D E + D +
Sbjct: 715 RFFRNDVNRICPKPEDPSAKFKHEGVDTTRLNDVSSAGSSTSVSGDTGEKRSRKSFDDVH 774
Query: 759 LEEV----PSSTPAVDQACYSLHEVKNRNTSSHSGEIVPANRSSLSPYKGIWASELKNSS 814
LE++ P ++ SL +K + S+ +++PAN S++ + + +S +K+S+
Sbjct: 775 LEKLICKKPEGRDCSGKSLSSLFSIKEASHSNSWKDVLPANSPSVTSFNSL-SSTVKSSN 833
Query: 815 DLIQFEKKLLLSGRKSIQYRDHEFIDLTSNSSLHAKPRKEELIAPCSTKKRKVLISESDQ 874
+L EKK++LS +KS QY+ HE +DLT S + P+K L+ C+ +KRK+ +E
Sbjct: 834 NLSHREKKVVLSDKKSSQYQSHEVVDLTDFSVMDEHPKKGLLVG-CAAEKRKLFSTE--- 889
Query: 875 MQCVKKISEIASDAESSQPSSFIPITNKVKHEKPQISDSGSRI----IAQGSAPSKVDGT 930
+ + + S P+ ++ K+ K + S S SR+ I S P T
Sbjct: 890 -HAPANFTRNSLGSSGSIPTESNDLSFKICSVKSEASPSDSRVVQKDIVHSSLPPSKSPT 948
Query: 931 TYRIEAEIQSEKSKGSHSSAPPCGGEETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKA 990
T ++ +E + K G EE KGS FL QV+EKLS EYKEFVGFMKA+K+KA
Sbjct: 949 TQKMGSESVKQNEKIVKCVTVQPGDEEAKGSDFLSQVREKLSDREYKEFVGFMKALKTKA 1008
Query: 991 MKISHVLQSIAKLFAGPERLPLLRRFKDYVPAKYHPLYEQYL 1032
M I+HVLQSI ++F+GP+RL L FKDY+PAKYH LYEQ L
Sbjct: 1009 MGITHVLQSIVRIFSGPDRLRLRTGFKDYIPAKYHFLYEQLL 1050
>gi|356547406|ref|XP_003542103.1| PREDICTED: regulator of telomere elongation helicase 1-like [Glycine
max]
Length = 1001
Score = 1270 bits (3286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/1036 (62%), Positives = 787/1036 (75%), Gaps = 42/1036 (4%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MPTYKIRGIDV+FP+EAY+ QLVYM+KVIQSLQ KCNALLESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPTYKIRGIDVDFPYEAYESQLVYMDKVIQSLQEKCNALLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
KSLGSF+T S + S ++ V+SSQS S+ TI+Y SRTHSQ+RQVIQELK ++YR
Sbjct: 61 KSLGSFTTGVSMQADDKSEGKNDVSSSQSESSRFSTIVYASRTHSQIRQVIQELKRTSYR 120
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
PKMV+LGSREQLCIH EV LLRG Q NACR LC++ R CNH +V +YMK+NP LG+
Sbjct: 121 PKMVVLGSREQLCIHDEVKLLRGKTQTNACRLLCRRRGKRHCNHFKKVPEYMKDNPQLGE 180
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
EP+DIEDLVNIGR FGPCPY++++EL K VDIVFAPYNYLID +RK L + W NSILIF
Sbjct: 181 EPVDIEDLVNIGRRFGPCPYYLSKELHKFVDIVFAPYNYLIDRGYRKSLQLSWSNSILIF 240
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHNLE ICADAASFDL S LLTACISEA++CID+S RR +S+D++ NPD+FAILRAL
Sbjct: 241 DEAHNLESICADAASFDLPSWLLTACISEAESCIDLSIERRDKSNDKSQNPDDFAILRAL 300
Query: 301 LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
LLKLEKRIAEVPI SKELG+TKPGPYIYELLADLNIT +TA KL DIV VA+ LL+E
Sbjct: 301 LLKLEKRIAEVPIESKELGYTKPGPYIYELLADLNITHKTASKLRDIVAVASTLLEEHN- 359
Query: 361 QNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWC 420
Q K + T CR++ I IL ++FRD TAH+ YYRVH+RE +A + + KGK SRTLSWWC
Sbjct: 360 QQKSTGTVCRLDRIGEILDMVFRDGRTAHAKYYRVHLREVEAWSGNGSKGKVSRTLSWWC 419
Query: 421 FNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP 480
FNPGIAM++F + V SIILTSGTLSPM+SFAQELKL+FP+R+ENPHVIT+ QIWAG++P
Sbjct: 420 FNPGIAMEDFPKYGVRSIILTSGTLSPMESFAQELKLDFPIRLENPHVITANQIWAGVLP 479
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
VGPSG NSSYR RDS EYKQELGN IVN+ARIVPDGLL+FFPSYYL+DQ IACWK +S
Sbjct: 480 VGPSGRTFNSSYRTRDSPEYKQELGNAIVNLARIVPDGLLVFFPSYYLLDQIIACWK-SS 538
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
+ N T+IW+RICKHKKPV+EPR SS FPL+I+DYM L DTS SGA+FFAVCRGKVSEGL
Sbjct: 539 NENSTSIWDRICKHKKPVIEPRDSSSFPLSIKDYMTTLNDTSASGAIFFAVCRGKVSEGL 598
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DFADHAGRAVVITG+PFAT TDPKVRLKREYLD Q++ QG +K + L+G++WYNQQ
Sbjct: 599 DFADHAGRAVVITGLPFATSTDPKVRLKREYLDQQSRPQGELFK--VMPVLTGDEWYNQQ 656
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLT 720
ASRAVNQAVGRVIRHR+DYGAIIFCDERF+HP R+SQ+S WIQPHI+C+S+FG+VV+TLT
Sbjct: 657 ASRAVNQAVGRVIRHRYDYGAIIFCDERFSHPHRQSQVSRWIQPHIKCFSRFGEVVFTLT 716
Query: 721 RFFREERICGSTNLKLIKTEVSGDVRELKPVDL-LDKISLEEVPS--STPAVDQ-ACYSL 776
RFFR+ G T + +++ + G++ E+ D +DK E++ S +TP + SL
Sbjct: 717 RFFRDVGTQGPTKVSMLEAKNGGNIGEIPSSDQNMDKFHKEKLLSHLATPMTQNFSASSL 776
Query: 777 HEVKNRNTSSHSGEIVPANRSSLSPYKGIWASELKNSSDLIQFEKKLLLSGRKSIQYRDH 836
+ K + +S GEIVPANRSSL G ++S ++ K+LL RK++Q ++
Sbjct: 777 LDTK-KGCTSFLGEIVPANRSSLFSDNGK-TVHCESSRNIC---GKVLLGERKTLQSQEC 831
Query: 837 EFIDLTSNSSLHAKPRKEELIAPCSTKKRKVLISESDQMQCVKKISEIASDAESSQPSSF 896
+ +DL + L K K+ IAPCS+KKR+ + + D Q +E +S A S
Sbjct: 832 DRLDLADDCQLGEKS-KDTPIAPCSSKKRRFITGDYDLKQYFGNSNEHSSSASQSAQGGV 890
Query: 897 IPITNKVKHEKPQISDSGSRIIAQGSAPSKVDGTTYRIEAEIQSEKSKGSHSSAPPCGGE 956
++H+ SDS I +G+ P P G+
Sbjct: 891 -----DLRHKDGVASDSLELIRQKGNLPDDF-----------------------VPSVGD 922
Query: 957 ETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAKLFAGPERLPLLRRF 1016
ETKGSAFL QV++KLSA EY FVG+MKA+K+K MKIS VLQ I++LF GP+RLPLL+RF
Sbjct: 923 ETKGSAFLAQVRDKLSAAEYINFVGYMKALKTKTMKISEVLQCISRLFTGPDRLPLLKRF 982
Query: 1017 KDYVPAKYHPLYEQYL 1032
KDY+PAKYH LYE Y+
Sbjct: 983 KDYIPAKYHSLYEHYV 998
>gi|357455003|ref|XP_003597782.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486830|gb|AES68033.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1089
Score = 1217 bits (3150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1069 (59%), Positives = 783/1069 (73%), Gaps = 80/1069 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MPTYKIRGIDV+FP+EAYD QLVYM+KV+QSLQ + NALLESPTGTGKTLCLLCATLAWR
Sbjct: 42 MPTYKIRGIDVDFPYEAYDSQLVYMDKVMQSLQEESNALLESPTGTGKTLCLLCATLAWR 101
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQS--GDSKLPTILYTSRTHSQLRQVIQELKTSN 118
KSLGSFST G + +G ++ V+SSQS G SK PTI+Y SRTHSQ+RQVIQELK ++
Sbjct: 102 KSLGSFST-GMSIKTGDNG-KTEVSSSQSEPGASKFPTIVYASRTHSQIRQVIQELKRTS 159
Query: 119 YRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTN--RRCNHHSRVADYMKNNP 176
YRPKM +LGSREQ CIH EV LLRG Q NACRF C++ RRCNH ++V DY+K NP
Sbjct: 160 YRPKMTVLGSREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRRCNHFNQVLDYLKQNP 219
Query: 177 HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
+LG+EP+DIEDLVNIG+T GPCPY + +EL K VDI+FAPYNYLID RK L + W NS
Sbjct: 220 NLGEEPVDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNS 279
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
ILIFDEAHNLE ICADAASFDL S LLTACISEA++C+D+ RR +S+D++ NPD+FAI
Sbjct: 280 ILIFDEAHNLESICADAASFDLPSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAI 339
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
L+ALLLKLEKRIAEV I SKELGFTKPGPYI+ELLADLNIT +TA KL IV A+ LL+
Sbjct: 340 LKALLLKLEKRIAEVHIESKELGFTKPGPYIFELLADLNITHKTAPKLKSIVTDASTLLE 399
Query: 357 EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTL 416
ED Q K ++ CR+E++ +IL IIFRD T+H+ YYRVHV+EA+A AA+ GK SRTL
Sbjct: 400 EDS-QEKSTSNICRLETMKDILDIIFRDGRTSHAKYYRVHVKEAEAWAANGSLGKVSRTL 458
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWA 476
SWWCFNPGIA++EF++ V SIILTSGTLSP+DSFA+ELKL+FP+R+ENPHVI QIWA
Sbjct: 459 SWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHVIGPNQIWA 518
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
G+VPVGP G NSSYR RD++EYKQELGN IVN+ RIVPDGLL+FFPSYYL++Q I CW
Sbjct: 519 GVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYYLLEQSIGCW 578
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKV 596
K+ S+ ++IWERICK+KKPV+EPR+SS+F +I+DY+ KL DT+ SGAVFFAVCRGKV
Sbjct: 579 KSLSNDG-SSIWERICKNKKPVIEPRESSMFTSSIKDYLTKLNDTTASGAVFFAVCRGKV 637
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPK---------------------------VRLKR 629
SEGLDFADHAGRAVV+TG+P+AT+TDPK VRLKR
Sbjct: 638 SEGLDFADHAGRAVVVTGLPYATVTDPKSIAANSAAITAARCGAVLERYATSHSVVRLKR 697
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
EYLD Q+ +QGG +K L+G++WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF
Sbjct: 698 EYLDQQSGAQGGSFK-----VLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 752
Query: 690 AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRELK 749
P R+SQ+S WIQPHI+CYS+FG+VV+TLTRFFR+ R G+ L L++ E G++ E+
Sbjct: 753 TQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRDGRTRGAAKLSLLEAENGGNLGEIP 812
Query: 750 PVDL-LDKISLEEVPSSTPA-VDQACY----SLHEVKNRNTSSHSGEIVPANRSSLSPYK 803
+ ++K +E++ S P VD C SL + K +TS G ++PANRSSLS
Sbjct: 813 SSEHSMEKFHMEKLLSPLPTPVDPNCTLKASSLLDTKKGHTSFMRG-VLPANRSSLSSDH 871
Query: 804 GIWASELKNSSDLIQFEKKLLLSGRKSIQYRDHEFIDLTSNSSLHAKPRKEELIAPCSTK 863
++ ++SSD ++++L R+++ ++H+ DL + L K K LIAPC TK
Sbjct: 872 RMFVGS-ESSSDT----REVVLHKRRTVLSQEHDGFDLADSCQLGEKS-KNMLIAPCITK 925
Query: 864 KRKVLISESDQMQCVKKISEIASDAESSQPSSFIPITNKVKHEKPQISDSGSRIIAQGSA 923
KR+ + E D Q +E +S A N PQ D
Sbjct: 926 KRRFIAGEYDLKQHFGNSNEQSSSASQ----------NAQGDVDPQCKD----------- 964
Query: 924 PSKVDGTTYRIEAEIQSEKSKGSHSSAPPCGGEETKGSAFLIQVQEKLSATEYKEFVGFM 983
+ T+ E +K S P G T+GSAFL QV++KLSA EY +FVG+M
Sbjct: 965 ----NVTSQSRNLEFLRQKDNLPADSTPTSDG--TQGSAFLAQVRDKLSAAEYIDFVGYM 1018
Query: 984 KAMKSKAMKISHVLQSIAKLFAGPERLPLLRRFKDYVPAKYHPLYEQYL 1032
KA+K+K +KIS VL SI++LF+GPERLPLL+RFKDY+PAKYH LYEQY+
Sbjct: 1019 KALKTKTLKISEVLLSISRLFSGPERLPLLKRFKDYIPAKYHSLYEQYV 1067
>gi|357454989|ref|XP_003597775.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486823|gb|AES68026.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1048
Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1069 (59%), Positives = 783/1069 (73%), Gaps = 80/1069 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MPTYKIRGIDV+FP+EAYD QLVYM+KV+QSLQ + NALLESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPTYKIRGIDVDFPYEAYDSQLVYMDKVMQSLQEESNALLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQS--GDSKLPTILYTSRTHSQLRQVIQELKTSN 118
KSLGSFST G + +G ++ V+SSQS G SK PTI+Y SRTHSQ+RQVIQELK ++
Sbjct: 61 KSLGSFST-GMSIKTGDNG-KTEVSSSQSEPGASKFPTIVYASRTHSQIRQVIQELKRTS 118
Query: 119 YRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTN--RRCNHHSRVADYMKNNP 176
YRPKM +LGSREQ CIH EV LLRG Q NACRF C++ RRCNH ++V DY+K NP
Sbjct: 119 YRPKMTVLGSREQFCIHDEVKLLRGRTQTNACRFACRRRAKQKRRCNHFNQVLDYLKQNP 178
Query: 177 HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
+LG+EP+DIEDLVNIG+T GPCPY + +EL K VDI+FAPYNYLID RK L + W NS
Sbjct: 179 NLGEEPVDIEDLVNIGKTSGPCPYHLAKELHKAVDIIFAPYNYLIDRGKRKALQISWSNS 238
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
ILIFDEAHNLE ICADAASFDL S LLTACISEA++C+D+ RR +S+D++ NPD+FAI
Sbjct: 239 ILIFDEAHNLESICADAASFDLPSWLLTACISEAQSCVDLLIERRNKSNDKSQNPDDFAI 298
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
L+ALLLKLEKRIAEV I SKELGFTKPGPYI+ELLADLNIT +TA KL IV A+ LL+
Sbjct: 299 LKALLLKLEKRIAEVHIESKELGFTKPGPYIFELLADLNITHKTAPKLKSIVTDASTLLE 358
Query: 357 EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTL 416
ED Q K ++ CR+E++ +IL IIFRD T+H+ YYRVHV+EA+A AA+ GK SRTL
Sbjct: 359 EDS-QEKSTSNICRLETMKDILDIIFRDGRTSHAKYYRVHVKEAEAWAANGSLGKVSRTL 417
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWA 476
SWWCFNPGIA++EF++ V SIILTSGTLSP+DSFA+ELKL+FP+R+ENPHVI QIWA
Sbjct: 418 SWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHVIGPNQIWA 477
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
G+VPVGP G NSSYR RD++EYKQELGN IVN+ RIVPDGLL+FFPSYYL++Q I CW
Sbjct: 478 GVVPVGPLGRTFNSSYRTRDTMEYKQELGNAIVNLTRIVPDGLLVFFPSYYLLEQSIGCW 537
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKV 596
K+ S+ ++IWERICK+KKPV+EPR+SS+F +I+DY+ KL DT+ SGAVFFAVCRGKV
Sbjct: 538 KSLSNDG-SSIWERICKNKKPVIEPRESSMFTSSIKDYLTKLNDTTASGAVFFAVCRGKV 596
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPK---------------------------VRLKR 629
SEGLDFADHAGRAVV+TG+P+AT+TDPK VRLKR
Sbjct: 597 SEGLDFADHAGRAVVVTGLPYATVTDPKSIAANSAAITAARCGAVLERYATSHSVVRLKR 656
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
EYLD Q+ +QGG +K L+G++WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF
Sbjct: 657 EYLDQQSGAQGGSFK-----VLTGDEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 711
Query: 690 AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRELK 749
P R+SQ+S WIQPHI+CYS+FG+VV+TLTRFFR+ R G+ L L++ E G++ E+
Sbjct: 712 TQPHRQSQVSKWIQPHIKCYSRFGEVVFTLTRFFRDGRTRGAAKLSLLEAENGGNLGEIP 771
Query: 750 PVDL-LDKISLEEVPSSTPA-VDQACY----SLHEVKNRNTSSHSGEIVPANRSSLSPYK 803
+ ++K +E++ S P VD C SL + K +TS G ++PANRSSLS
Sbjct: 772 SSEHSMEKFHMEKLLSPLPTPVDPNCTLKASSLLDTKKGHTSFMRG-VLPANRSSLSSDH 830
Query: 804 GIWASELKNSSDLIQFEKKLLLSGRKSIQYRDHEFIDLTSNSSLHAKPRKEELIAPCSTK 863
++ ++SSD ++++L R+++ ++H+ DL + L K K LIAPC TK
Sbjct: 831 RMFVGS-ESSSD----TREVVLHKRRTVLSQEHDGFDLADSCQLGEKS-KNMLIAPCITK 884
Query: 864 KRKVLISESDQMQCVKKISEIASDAESSQPSSFIPITNKVKHEKPQISDSGSRIIAQGSA 923
KR+ + E D Q +E +S A N PQ D
Sbjct: 885 KRRFIAGEYDLKQHFGNSNEQSSSASQ----------NAQGDVDPQCKD----------- 923
Query: 924 PSKVDGTTYRIEAEIQSEKSKGSHSSAPPCGGEETKGSAFLIQVQEKLSATEYKEFVGFM 983
+ T+ E +K S P G T+GSAFL QV++KLSA EY +FVG+M
Sbjct: 924 ----NVTSQSRNLEFLRQKDNLPADSTPTSDG--TQGSAFLAQVRDKLSAAEYIDFVGYM 977
Query: 984 KAMKSKAMKISHVLQSIAKLFAGPERLPLLRRFKDYVPAKYHPLYEQYL 1032
KA+K+K +KIS VL SI++LF+GPERLPLL+RFKDY+PAKYH LYEQY+
Sbjct: 978 KALKTKTLKISEVLLSISRLFSGPERLPLLKRFKDYIPAKYHSLYEQYV 1026
>gi|224054204|ref|XP_002298143.1| predicted protein [Populus trichocarpa]
gi|222845401|gb|EEE82948.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 1207 bits (3124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/746 (77%), Positives = 644/746 (86%), Gaps = 6/746 (0%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MPTYKIRGIDV+FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR
Sbjct: 2 MPTYKIRGIDVDFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 61
Query: 61 KSLGSFSTLGSQVNNQISGSQ-SSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY 119
KSLG FST + N +I+G + V SSQS D LPTI+Y SRTHSQLRQVIQELK S+Y
Sbjct: 62 KSLGGFSTGKIERNGRIAGGKLDIVPSSQSEDRNLPTIVYASRTHSQLRQVIQELKRSSY 121
Query: 120 RPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLG 179
RPKMVILGSREQLCIH EVSLLRG QNNAC +CK R+C H+SRVADY+K NPHLG
Sbjct: 122 RPKMVILGSREQLCIHEEVSLLRGKVQNNACHLICKTRGKRQCTHYSRVADYVKCNPHLG 181
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
DEP+DIEDLVNIGRTFGPCPY+++REL K VDI+FAPYNYLID RK L ++W NSILI
Sbjct: 182 DEPVDIEDLVNIGRTFGPCPYYISRELHKVVDILFAPYNYLIDRGNRKSLAIDWDNSILI 241
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
FDEAHNLE +CADAASFDL S LLTACISEAK+CID+S TRR +S+D++ NPDNFAILRA
Sbjct: 242 FDEAHNLESLCADAASFDLPSWLLTACISEAKSCIDLSVTRREESNDKSWNPDNFAILRA 301
Query: 300 LLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK 359
LLLKLEKRIAEVPI SKELGFTKPGPYIYELLADLN+T +TA K+IDI++ AA LL+EDK
Sbjct: 302 LLLKLEKRIAEVPIESKELGFTKPGPYIYELLADLNVTHDTATKIIDIIKDAAVLLEEDK 361
Query: 360 LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWW 419
Q+K T CR+ESIS+ L+IIFR+K +H+ +YR E +ANAADVLKGK SRTLSWW
Sbjct: 362 -QDKSKGTGCRLESISDFLQIIFREKNNSHANFYR----EGEANAADVLKGKPSRTLSWW 416
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIV 479
CFNPGIAMQEFSR+ V SIILTSGTLSP+DSFAQELKL+FP+R+ENPHVI+S QIWAG+V
Sbjct: 417 CFNPGIAMQEFSRMGVRSIILTSGTLSPLDSFAQELKLDFPIRLENPHVISSNQIWAGVV 476
Query: 480 PVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNT 539
P GPSG LNSSYR RDS+EYKQELGN IVN ARIVPDGLL+FFPSYYL+DQCI+CWKN
Sbjct: 477 PAGPSGRSLNSSYRTRDSLEYKQELGNAIVNFARIVPDGLLVFFPSYYLLDQCISCWKNM 536
Query: 540 SHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEG 599
S N TTIWERICKHKKPVVEPRQSSLFPLAIEDY+AKLKDTSTSGAVFFAVCRGKVSEG
Sbjct: 537 SQANSTTIWERICKHKKPVVEPRQSSLFPLAIEDYLAKLKDTSTSGAVFFAVCRGKVSEG 596
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQ 659
LDFADHAGRAVVITGMPFA TDPKVRLKREYLD Q SQ K KL LSGE+WY Q
Sbjct: 597 LDFADHAGRAVVITGMPFAMRTDPKVRLKREYLDGQTHSQRDGCKMLKLQVLSGEEWYGQ 656
Query: 660 QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTL 719
QASRAVNQAVGRVIRHR+DYGAIIFCDERF H +R++QISLWIQPHI+C+SKFGDVV+TL
Sbjct: 657 QASRAVNQAVGRVIRHRYDYGAIIFCDERFEHRNRQTQISLWIQPHIKCHSKFGDVVFTL 716
Query: 720 TRFFREERICGSTNLKLIKTEVSGDV 745
+RFFR+ + L+ I E +G V
Sbjct: 717 SRFFRDGGSRDAAKLRSIPREDTGKV 742
>gi|42563365|ref|NP_178113.3| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
gi|332198212|gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
Length = 1040
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1041 (54%), Positives = 734/1041 (70%), Gaps = 73/1041 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRGI+VEFPFEAY Q++YM++VI+SLQNKC+ALLESPTGTGKTLCLLCATLAWR
Sbjct: 46 MPNYSIRGINVEFPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWR 105
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSK---LPTILYTSRTHSQLRQVIQELKTS 117
KSLGSFST + N+ I S S SQSG PTI+Y SRTHSQLRQVI+ELK S
Sbjct: 106 KSLGSFSTRKDRKNSAIPWSDSDEPLSQSGGGGGGAFPTIVYASRTHSQLRQVIKELKRS 165
Query: 118 NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPH 177
+YRPKMV+LGSREQLC++ EV+ LRG A NAC++LCKK R+CNH +R+ DY+K+NPH
Sbjct: 166 SYRPKMVVLGSREQLCVNEEVNSLRGKALTNACQYLCKKRGKRQCNHFNRLPDYLKHNPH 225
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSI 237
+GDEP+DIEDLVNIG+ GPCPY++TREL K VDI+FAPYNYLI +RK L V W NS+
Sbjct: 226 IGDEPVDIEDLVNIGKDSGPCPYYITRELHKDVDIIFAPYNYLISNGYRKFLKVNWTNSV 285
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAIL 297
LIFDEAHNLE +CAD+ASFDL S LL+ACISEA+ C+ +++ RR +D ++NP+NFAIL
Sbjct: 286 LIFDEAHNLESLCADSASFDLPSVLLSACISEAQECVQLAAARRDSLNDVSINPENFAIL 345
Query: 298 RALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
+ LLLKL++ I++VPI ++ GFTKPGPYIYE+L LNIT ETA KLI VE AA L+E
Sbjct: 346 KGLLLKLQELISKVPIPKRDEGFTKPGPYIYEMLKSLNITHETAPKLIGTVEEAAVFLEE 405
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
+K Q + ++E I+++LK+IFR+ G+ H+ YRVHV+E + N+ DV+KGK SRTLS
Sbjct: 406 EK-QRTATNAGSKLEIIADMLKLIFRENGSNHADVYRVHVQELEQNSTDVMKGKVSRTLS 464
Query: 418 WWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAG 477
WWCF+PGI M + ++ VGSIILTSGTLSPMDS AQELKL+FP+R+ENPHVI+S Q+WAG
Sbjct: 465 WWCFSPGITMLDIAQKGVGSIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSNQLWAG 524
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
+V GPSGY+LNSSYRNRD EYKQELGN IVN +R+VP+GLLIFFPSYYLMD CI WK
Sbjct: 525 VVSTGPSGYVLNSSYRNRDVPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCITFWK 584
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
N + N T+WERICK KKPV+EP+ SSLFP A+ D+ KL+D +TSG VFFAVCRGKVS
Sbjct: 585 NGCYRNSMTVWERICKLKKPVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVS 644
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EGLDFAD AGRAVVITG+P+A +TDP+V+LKRE+LD QSQ + K + + LSG WY
Sbjct: 645 EGLDFADGAGRAVVITGLPYARVTDPRVKLKREFLD--EQSQLADVKLPRSTLLSGSMWY 702
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVY 717
+Q+A+RAVNQA+GRVIRHRHDYGAIIFCD+RF PS++S+ISLWI+P+++CYS++G+V+
Sbjct: 703 SQEAARAVNQAIGRVIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVKCYSRYGEVIS 762
Query: 718 TLTRFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAVDQACYSLH 777
L RFFR ER + +L+ + + V L PV+ S+E+ P TPA +
Sbjct: 763 DLARFFRTER--SNFPARLVTEQENNIVSTLLPVE-----SIEDNP--TPAFGNS----- 808
Query: 778 EVKN----RNTSSHSGEIVPANRSSLSPYKGIWASELKNSSDLIQFEKKLLLSGRKSIQY 833
+KN +N S PANR+ SP + + +N +++ K+
Sbjct: 809 NLKNVGVAQNELSRLEAFPPANRA--SPLERDGNNVKRNGLTILKHTGKI---------- 856
Query: 834 RDHEFIDLTSNSSLHAKPR--KEELIAPCSTKKRKVLISESDQMQCVKKISEIASDAESS 891
PR K +++ CS++K K++ D+ V++ E+ D ES
Sbjct: 857 -----------------PRIVKGDVMQGCSSRKAKLVELSDDEETPVERRCEVV-DLESD 898
Query: 892 QPSSFIPITNKVKHEKPQISDSGSRIIAQGSAPSKVDGTTYRIEAEIQSEKSKGSHSSAP 951
+ +T ++A + + + R E Q S ++
Sbjct: 899 NCETQTCVT---------------EVLASSTCLNTMGLKKKRKVPESQGSASSSVLTAKG 943
Query: 952 PCGGE--ETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAKLFAGPER 1009
GG+ E SAFL QV+EKL+ EYK+F+G+M+A+K K +K+++V+QSI +LF G ER
Sbjct: 944 NGGGDKKEASASAFLSQVKEKLNTEEYKKFIGYMQALKKKEIKLANVMQSIVQLFCGSER 1003
Query: 1010 LPLLRRFKDYVPAKYHPLYEQ 1030
LL FKD+VP KY P YE+
Sbjct: 1004 DHLLMGFKDFVPVKYRPAYEE 1024
>gi|297743289|emb|CBI36156.3| unnamed protein product [Vitis vinifera]
Length = 777
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/796 (68%), Positives = 619/796 (77%), Gaps = 87/796 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP YKIRGIDV+FPFEAYDCQLVYMEKVIQSLQ +CNALLESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPIYKIRGIDVDFPFEAYDCQLVYMEKVIQSLQERCNALLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
K+ V SQS + LPTI+Y SRTHSQLRQVIQELK ++YR
Sbjct: 61 KN---------------------VPHSQSAKTNLPTIIYASRTHSQLRQVIQELKRTSYR 99
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNR-RCNHHSRVADYMKNNPHLG 179
PKMV+LGSREQLCIH EVSLLRG AQ NAC LC+K T + C H+SRV+D+MK NP LG
Sbjct: 100 PKMVVLGSREQLCIHEEVSLLRGRAQTNACHSLCRKRTKKGYCGHYSRVSDFMKYNPGLG 159
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
D+PIDIEDLVNIGR+ GPCPY+++REL K VDI+FAPYNYLID RK L V W NSILI
Sbjct: 160 DDPIDIEDLVNIGRSNGPCPYYVSRELHKVVDILFAPYNYLIDRGNRKSLSVCWNNSILI 219
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR--GQSSDETLNPDNFAIL 297
FDEAHNLEG+CADAASFDL S LLTACISEAKNC+D+S +RR +++D++ NPDNFAIL
Sbjct: 220 FDEAHNLEGLCADAASFDLPSWLLTACISEAKNCVDLSISRREIEKANDKSCNPDNFAIL 279
Query: 298 R-----ALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAA 352
R ALLLKLEK+IAEVPI SKELGFT+PGPYIYELLADLNIT +TA LIDI+E AA
Sbjct: 280 RGNHSAALLLKLEKQIAEVPIESKELGFTRPGPYIYELLADLNITHKTATMLIDIIEEAA 339
Query: 353 ELLQEDK--LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK- 409
LL+ED + K +T CR+E++S+ILKIIFRD G AH+ +YRVHV+E +ANAAD LK
Sbjct: 340 LLLEEDAKGVAQKTKSTICRLETMSDILKIIFRDGGNAHAKFYRVHVQEVEANAADALKE 399
Query: 410 -----------------------------------------------GKASRTLSWWCFN 422
GKASRTLSWWCFN
Sbjct: 400 AAGTKFRTGAIREGSCGKVAVAVAQMVFKVDIRLRSAHKKTKANPNIGKASRTLSWWCFN 459
Query: 423 PGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVG 482
PGIAMQEF+ L V SIILTSGTLSP++SFAQELKL FP+R+ENPHVI+S QIWAG+VP G
Sbjct: 460 PGIAMQEFAVLGVSSIILTSGTLSPLESFAQELKLEFPVRLENPHVISSNQIWAGVVPAG 519
Query: 483 PSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHG 542
PSG NSSYR RDS+EYKQELGN IVN ARIVPDGLL+FFPSYY+++QC+ CWKN SH
Sbjct: 520 PSGCSFNSSYRTRDSLEYKQELGNAIVNFARIVPDGLLVFFPSYYILEQCVGCWKNKSHA 579
Query: 543 NLT---TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEG 599
N T TIWERICKHK+PV+EPRQSSLFP +IEDYM KLKD+S SGAVFFAVCRGKVSEG
Sbjct: 580 NSTNSSTIWERICKHKQPVIEPRQSSLFPSSIEDYMNKLKDSSMSGAVFFAVCRGKVSEG 639
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQ 659
LDFADHAGRAVVITG+PFA TDPKVRLKRE+LD + SQ + L+GE+WY Q
Sbjct: 640 LDFADHAGRAVVITGIPFAMRTDPKVRLKREFLDQRGLSQ-----KEGCKVLTGEEWYTQ 694
Query: 660 QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTL 719
QASRAVNQAVGRVIRH HD+GAIIFCDERFAHP+R+SQISLWIQPHI+CYSKFGDVV+TL
Sbjct: 695 QASRAVNQAVGRVIRHCHDFGAIIFCDERFAHPNRQSQISLWIQPHIKCYSKFGDVVFTL 754
Query: 720 TRFFREERICGSTNLK 735
TRFFR+ G LK
Sbjct: 755 TRFFRDAGTHGPPQLK 770
>gi|297842871|ref|XP_002889317.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
gi|297335158|gb|EFH65576.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
Length = 1016
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1043 (54%), Positives = 733/1043 (70%), Gaps = 81/1043 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRGI+V+FPFEAY Q++YM++VI+SLQNKC+ALLESPTGTGKTLCLLCATLAWR
Sbjct: 33 MPNYSIRGINVDFPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWR 92
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
KSLGSFST + N I S S SQSG + PTI+Y SRTHSQLRQVI+ELK +YR
Sbjct: 93 KSLGSFSTRKDRKNCSIPWSDSDDLMSQSGGA-FPTIIYASRTHSQLRQVIKELKRCSYR 151
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
PKMV+LGSREQLC++ EV+ LRG A NAC++LCKK R+CNH +R+ DY+K+N H+GD
Sbjct: 152 PKMVVLGSREQLCVNEEVNSLRGKALTNACQYLCKKRGKRQCNHFNRIPDYLKHNTHIGD 211
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
EP+DIEDLVNIG+ GPCPY++TREL K VDI+FAPYNYLI +RK L V W NS+LIF
Sbjct: 212 EPLDIEDLVNIGKDSGPCPYYITRELHKDVDIIFAPYNYLISNGYRKFLKVNWNNSVLIF 271
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHNLE +CAD+ASFDL S LL+ACISEA+ C+ +++ RR +D ++NP+NFAIL+ L
Sbjct: 272 DEAHNLESLCADSASFDLPSVLLSACISEAQECVQLAAARRNSLNDVSINPENFAILKGL 331
Query: 301 LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
LLKL++ I++VPI ++ GFTKPGPYIYE+L LNIT ETA KLI VE AA L+E+K
Sbjct: 332 LLKLQELISKVPIPKRDEGFTKPGPYIYEMLKSLNITHETAPKLIGTVEEAAVFLEEEK- 390
Query: 361 QNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWC 420
Q + ++E I+++LK+IFR+ G+ H+ YRVHV+E + N+ DV+KGK SRTLSWWC
Sbjct: 391 QRTATNAGSKLEIIADMLKLIFRENGSNHADVYRVHVQELEQNSTDVMKGKVSRTLSWWC 450
Query: 421 FNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP 480
F+PGI M + ++ VGSIILTSGTLSPMDS AQELKL+FP+R+ENPHVI+S Q+WAG+V
Sbjct: 451 FSPGITMLDIAKKGVGSIILTSGTLSPMDSLAQELKLDFPVRLENPHVISSNQLWAGVVS 510
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
GPSGY+LNSSYRNRD EYKQELGN IVN +R+VP+GLLIFFPSYYLMD CI+ WKN
Sbjct: 511 TGPSGYVLNSSYRNRDVPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCISFWKNGC 570
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
H N T+WERICK KKPV+EP+ SSLFP A++D+ KL+D STSG VFFAVCRGKVSEGL
Sbjct: 571 HRNSMTVWERICKLKKPVIEPKDSSLFPAAMQDFSEKLQDRSTSGVVFFAVCRGKVSEGL 630
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DFAD AGRAVVITG+P+A +TDP+V LKRE+LD QSQ + K + + LSG WY+Q+
Sbjct: 631 DFADGAGRAVVITGLPYARVTDPRVILKREFLD--EQSQLADVKLPRSTLLSGSMWYSQE 688
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLT 720
A+RAVNQA+GRVIRHRHDYGAIIFCD+RF PS++S+ISLWI+P+++CYS++G+V+ L
Sbjct: 689 AARAVNQAIGRVIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVKCYSRYGEVISDLA 748
Query: 721 RFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAVDQACYSLHEVK 780
RFFR ER + +L+ + + V L P++ S ++ P TPA + +K
Sbjct: 749 RFFRTER--SNFPARLVTDQENNIVSTLVPME-----STKDNP--TPAFGNS-----NLK 794
Query: 781 N----RNTSSHSGEIVPANRSSL-------SPYKGIWASELKNSSDLIQFEKKLLLSGRK 829
N +N S PANR+S +KG+ + LK++ + K ++ G
Sbjct: 795 NVGVAQNELSRLEAFPPANRASPLERDGNNVKWKGL--TILKHTGKIPHIVKGDVMQGCS 852
Query: 830 SIQYRDHEFIDLTSNSSLHAKPRKEELIAPCSTKKRKVLISESDQMQCVKKISEIASDAE 889
S R + ++L+ + + R E + C C K+ E A
Sbjct: 853 S---RKAKLVELSDDEETPVERRCEVVDLECDN--------------CEKQTCETEVLA- 894
Query: 890 SSQPSSFIPITNKVKHEKPQISDSGSRIIAQGSAPSKVDGTTYRIEAEIQSEKSKGSHSS 949
SS + + + K K ++ Q S S S + A+G+
Sbjct: 895 SSTCFNTMGLKKKRKVQESQGSASSSVLTAKGNG-------------------------- 928
Query: 950 APPCGG--EETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAKLFAGP 1007
GG +E SAFL QV+EKL+ EYK+F+G+M+A+K K +K+++V++SI +LF G
Sbjct: 929 ----GGNKKEASASAFLSQVKEKLNTEEYKKFIGYMQALKKKEIKLANVMESIVQLFCGR 984
Query: 1008 ERLPLLRRFKDYVPAKYHPLYEQ 1030
ER LL FKD+VP KY P YE+
Sbjct: 985 ERDHLLMGFKDFVPVKYRPAYEE 1007
>gi|12324581|gb|AAG52242.1|AC011717_10 hypothetical protein; 30600-24965 [Arabidopsis thaliana]
Length = 959
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/805 (61%), Positives = 622/805 (77%), Gaps = 28/805 (3%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRGI+VEFPFEAY Q++YM++VI+SLQNKC+ALLESPTGTGKTLCLLCATLAWR
Sbjct: 46 MPNYSIRGINVEFPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWR 105
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSK---LPTILYTSRTHSQLRQVIQELKTS 117
KSLGSFST + N+ I S S SQSG PTI+Y SRTHSQLRQVI+ELK S
Sbjct: 106 KSLGSFSTRKDRKNSAIPWSDSDEPLSQSGGGGGGAFPTIVYASRTHSQLRQVIKELKRS 165
Query: 118 NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPH 177
+YRPKMV+LGSREQLC++ EV+ LRG A NAC++LCKK R+CNH +R+ DY+K+NPH
Sbjct: 166 SYRPKMVVLGSREQLCVNEEVNSLRGKALTNACQYLCKKRGKRQCNHFNRLPDYLKHNPH 225
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSI 237
+GDEP+DIEDLVNIG+ GPCPY++TREL K VDI+FAPYNYLI +RK L V W NS+
Sbjct: 226 IGDEPVDIEDLVNIGKDSGPCPYYITRELHKDVDIIFAPYNYLISNGYRKFLKVNWTNSV 285
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAIL 297
LIFDEAHNLE +CAD+ASFDL S LL+ACISEA+ C+ +++ RR +D ++NP+NFAIL
Sbjct: 286 LIFDEAHNLESLCADSASFDLPSVLLSACISEAQECVQLAAARRDSLNDVSINPENFAIL 345
Query: 298 RALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
+ LLLKL++ I++VPI ++ GFTKPGPYIYE+L LNIT ETA KLI VE AA L+E
Sbjct: 346 KGLLLKLQELISKVPIPKRDEGFTKPGPYIYEMLKSLNITHETAPKLIGTVEEAAVFLEE 405
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
+K Q + ++E I+++LK+IFR+ G+ H+ Y RE + N+ DV+KGK SRTLS
Sbjct: 406 EK-QRTATNAGSKLEIIADMLKLIFRENGSNHADVY----RELEQNSTDVMKGKVSRTLS 460
Query: 418 WWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAG 477
WWCF+PGI M + ++ VGSIILTSGTLSPMDS AQELKL+FP+R+ENPHVI+S Q+WAG
Sbjct: 461 WWCFSPGITMLDIAQKGVGSIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSNQLWAG 520
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
+V GPSGY+LNSSYRNRD EYKQELGN IVN +R+VP+GLLIFFPSYYLMD CI WK
Sbjct: 521 VVSTGPSGYVLNSSYRNRDVPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCITFWK 580
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
N + N T+WERICK KKPV+EP+ SSLFP A+ D+ KL+D +TSG VFFAVCRGKVS
Sbjct: 581 NGCYRNSMTVWERICKLKKPVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVS 640
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EGLDFAD AGRAVVITG+P+A +TDP+V+LKRE+LD QSQ + K + + LSG WY
Sbjct: 641 EGLDFADGAGRAVVITGLPYARVTDPRVKLKREFLD--EQSQLADVKLPRSTLLSGSMWY 698
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVY 717
+Q+A+RAVNQA+GRVIRHRHDYGAIIFCD+RF PS++S+ISLWI+P+++CYS++G+V+
Sbjct: 699 SQEAARAVNQAIGRVIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVKCYSRYGEVIS 758
Query: 718 TLTRFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAVDQACYSLH 777
L RFFR ER + +L+ + + V L PV+ S+E+ P TPA +
Sbjct: 759 DLARFFRTER--SNFPARLVTEQENNIVSTLLPVE-----SIEDNP--TPA-----FGNS 804
Query: 778 EVKN----RNTSSHSGEIVPANRSS 798
+KN +N S PANR+S
Sbjct: 805 NLKNVGVAQNELSRLEAFPPANRAS 829
>gi|222618779|gb|EEE54911.1| hypothetical protein OsJ_02439 [Oryza sativa Japonica Group]
Length = 1025
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1081 (51%), Positives = 713/1081 (65%), Gaps = 113/1081 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYME-----------KVIQSLQNKCNALLESPTGTGKT 49
MP Y+IRG+DV+FP + ++ S++ NALLESPTGTGKT
Sbjct: 1 MPVYRIRGVDVDFPTTPTTARSHTWTASSNPSSSDGGELAGSIRQGKNALLESPTGTGKT 60
Query: 50 LCLLCATLAWRKSLGSF--------------STLGSQ---VNNQISGSQ-SSVNSSQSGD 91
LCLLC+ LAWR++ G F GSQ +Q SGSQ S V++SQS
Sbjct: 61 LCLLCSALAWRRTFGEFLRGGGGGGGGGGGGGGAGSQQPPYGSQPSGSQHSGVSASQS-- 118
Query: 92 SKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACR 151
S+ P I+Y SRTHSQLRQVI+ELK ++YRPKM +LGSREQ+CIH EVS LRG QNNAC
Sbjct: 119 SRYPVIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMCIHEEVSKLRGRQQNNACH 178
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
+LCKK R C HH+ VA++M+NN LG E DIEDLVNIGRT GPCPY+++REL K+VD
Sbjct: 179 YLCKK---RWCRHHNSVAEFMRNNSELGSEACDIEDLVNIGRTKGPCPYYISRELSKSVD 235
Query: 212 IVFAPYNYLIDPWFRKGL-GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
I+FAPYNYLIDP R+ L G+ W N++LIFDEAHNLE ICADAASFDL L++CI+EA
Sbjct: 236 ILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICADAASFDLLPNNLSSCIAEA 295
Query: 271 KNCIDISSTRRG--QSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIY 328
+ CI + S +R S+D+ +P+N+AIL+ALL+ LEK+I+EV I+SKELG TKPG YIY
Sbjct: 296 QECIQLCSAKRTFENSADKQFDPENYAILKALLMALEKKISEVVIDSKELGHTKPGNYIY 355
Query: 329 ELLADLNITQETAYKLIDIVEVAAELLQEDKLQN-----KKSTTACRIESISNILKIIFR 383
E L++LNIT ET+ KLID ++ A+ LL+E K T CR+E+I +IL IIFR
Sbjct: 356 EFLSELNITSETSKKLIDTIDGASLLLEEGNSAETGPGMKAKATVCRLETIRDILDIIFR 415
Query: 384 DKGTAHSAYYRVHVREADANAADVLK--GKASRTLSWWCFNPGIAMQEFSRLEVGSIILT 441
G +H+ YYR HV E N+ D LK GK SRTLSWWCFNPG+AM+EF +L V SIILT
Sbjct: 416 GGGQSHAKYYRFHVNECQQNSGDALKVLGKVSRTLSWWCFNPGLAMEEFLKLGVRSIILT 475
Query: 442 SGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
SGTLSP+DS A EL L FP+R+ENPHVI S QIW G+VPVGPSG+ LNSSYR R++++YK
Sbjct: 476 SGTLSPLDSLALELNLEFPVRLENPHVIASDQIWVGVVPVGPSGHPLNSSYRTRETLKYK 535
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT---TIWERICKHKKPV 558
QELG TIVN ARIVPDGLL+FFPSY +MD+CI CWK+ +H N + TIW+RICKHK+PV
Sbjct: 536 QELGITIVNFARIVPDGLLVFFPSYSMMDKCINCWKDRNHENSSDEHTIWQRICKHKQPV 595
Query: 559 VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFA 618
+EPRQSS FP AIEDY AKL+D+ST+GA+FFAVCRGKVSEGLDFAD AGRAV++TGMPFA
Sbjct: 596 IEPRQSSNFPNAIEDYAAKLRDSSTTGAIFFAVCRGKVSEGLDFADRAGRAVIVTGMPFA 655
Query: 619 TMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
T TDPKVRLKR+YLD + K L+GE+WY QQA+RAVNQAVGRVIRHRHD
Sbjct: 656 TPTDPKVRLKRDYLDKLGSASNKNSKA-----LTGEEWYVQQAARAVNQAVGRVIRHRHD 710
Query: 679 YGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIK 738
YGAII+CDERF + +SQ+S W++P+I+CY K+G+VV LTRFFR++ S+ K +
Sbjct: 711 YGAIIYCDERFVWQNYQSQMSYWLRPYIKCYKKYGEVVQGLTRFFRDKVSIDSS--KPNE 768
Query: 739 TEVSGDVRELKPVDLLDKISLEEVPSSTPAV-----DQACYSLHEVKNRNTSSHSGEIVP 793
T+ + ++ V L DK +E S+ + S++ R+ +I P
Sbjct: 769 TDFNDNI-----VLLADKHKPQETISALAVTTANENQRTALSVNPTTKRSNYIKFAQITP 823
Query: 794 ANRSSLSPYKGIWASELKNSSDLIQFEKKLLLSGRKSIQYRDHEFIDLTSN-SSLHAKPR 852
ANRS+LS G ++ +LL SG K D + IDL ++ ++ H
Sbjct: 824 ANRSTLSMKHGCSSTS------------QLLYSGDK--LSTDAQVIDLAADVATSHLAGY 869
Query: 853 KEELIAPCSTKKRKVLISESDQMQCVKKISEIASDAESSQPSSFIPITNKVKHEKPQISD 912
+ + + P KK KV++ D F + K++H +
Sbjct: 870 RFKSLGP---KKAKVMVGSKD--------------------VCFDDGSPKLQHNVESRAL 906
Query: 913 SGSRIIAQGSAPSKVDGTTYRI-EAEIQSEKSKGSHSSAPPCGGEETKGSAFLIQVQEKL 971
+G + Q +A SK T+ + EKS G S+A P AFL +EKL
Sbjct: 907 AGC-LGEQSTASSKKSNITHAPGNSGAIHEKSGGQESNAGP---------AFLKLAREKL 956
Query: 972 SATEYKEFVGFMKAMKSKAMKISHVLQSIAKLFAGPERLPLLRRFKDYVPAKYHPLYEQY 1031
S EY++FV +MKA+K K M I L +IAKLF+ PERLPLL F+ +VP + LYEQ
Sbjct: 957 STAEYRDFVEYMKALKLKTMHIKDSLDAIAKLFSSPERLPLLEGFRVFVPKNHLSLYEQL 1016
Query: 1032 L 1032
+
Sbjct: 1017 V 1017
>gi|218188567|gb|EEC70994.1| hypothetical protein OsI_02661 [Oryza sativa Indica Group]
Length = 984
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/1039 (52%), Positives = 699/1039 (67%), Gaps = 94/1039 (9%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSF--------STLGSQ---V 73
M++V++SLQ NALLESPTGTGKTLCLLC+ LAWR++ G F GSQ
Sbjct: 1 MDRVLESLQQGKNALLESPTGTGKTLCLLCSALAWRRTFGEFLRGGGGGGGGGGSQQPPY 60
Query: 74 NNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLC 133
+Q SGSQ S S S S+ P I+Y SRTHSQLRQVI+ELK ++YRPKM +LGSREQ+C
Sbjct: 61 GSQPSGSQHS-GGSASQSSRYPVIIYASRTHSQLRQVIKELKATSYRPKMAVLGSREQMC 119
Query: 134 IHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGR 193
IH EVS LRG QNNAC +LCKK R C HH+ VA++M+NN LG E DIEDLVNIGR
Sbjct: 120 IHEEVSKLRGRQQNNACHYLCKK---RWCRHHNSVAEFMRNNSELGSEACDIEDLVNIGR 176
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL-GVEWKNSILIFDEAHNLEGICAD 252
T GPCPY+++REL K+VDI+FAPYNYLIDP R+ L G+ W N++LIFDEAHNLE ICAD
Sbjct: 177 TKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFDEAHNLESICAD 236
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRG--QSSDETLNPDNFAILRALLLKLEKRIAE 310
AASFDL L++CI+EA+ CI + S +R S+D+ +P+N+AIL+ALL+ LEK+I+E
Sbjct: 237 AASFDLLPNNLSSCIAEAQECIQLCSAKRTFENSADKQFDPENYAILKALLMALEKKISE 296
Query: 311 VPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN-----KKS 365
V I+SKELG TKPG YIYE L++LNIT ET+ KLID ++ A+ LL+E K
Sbjct: 297 VVIDSKELGHTKPGNYIYEFLSELNITSETSKKLIDTIDGASLLLEEGNSAETGPGMKAK 356
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK--GKASRTLSWWCFNP 423
T CR+E+I +IL IIFR G +H+ YYR HV E N+ D LK GK SRTLSWWCFNP
Sbjct: 357 ATVCRLETIRDILDIIFRGGGQSHAKYYRFHVNECQQNSGDALKVLGKVSRTLSWWCFNP 416
Query: 424 GIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGP 483
G+AM+EF +L V SIILTSGTLSP+DS A EL L FP+R+ENPHVI S QIW G+VPVGP
Sbjct: 417 GLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRLENPHVIASDQIWVGVVPVGP 476
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
SG+ LNSSYR R++++YKQELG TIVN ARIVPDGLL+FFPSY +MD+CI CWK+ +H N
Sbjct: 477 SGHPLNSSYRTRETLKYKQELGITIVNFARIVPDGLLVFFPSYSMMDKCINCWKDRNHEN 536
Query: 544 LT---TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
+ TIW+RICKHK+PV+EPRQSS FP AIEDY AKL+D+ST+GA+FFAVCRGKVSEGL
Sbjct: 537 SSDEHTIWQRICKHKQPVIEPRQSSNFPNAIEDYAAKLRDSSTTGAIFFAVCRGKVSEGL 596
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DFAD AGRAV++TGMPFAT TDPKVRLKR+YLD + K L+GE+WY QQ
Sbjct: 597 DFADRAGRAVIVTGMPFATPTDPKVRLKRDYLDKLGSASNKNSKA-----LTGEEWYVQQ 651
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLT 720
A+RAVNQAVGRVIRHRHDYGAII+CDERF + +SQ+S W++P+I+CY K+G+VV LT
Sbjct: 652 AARAVNQAVGRVIRHRHDYGAIIYCDERFVWQNYQSQMSYWLRPYIKCYKKYGEVVQGLT 711
Query: 721 RFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAV-----DQACYS 775
RFFR++ S+ K +T+ + ++ V L DK +E S+ + S
Sbjct: 712 RFFRDKVSIDSS--KPNETDFNDNI-----VLLADKHKPQETISALAVTTANENQRTALS 764
Query: 776 LHEVKNRNTSSHSGEIVPANRSSLSPYKGIWASELKNSSDLIQFEKKLLLSGRKSIQYRD 835
++ R+ +I PANRS+LS G ++ +LL SG K D
Sbjct: 765 VNPTTKRSNYIKFAQITPANRSTLSMKHGCSSTS------------QLLYSGDK--LSTD 810
Query: 836 HEFIDLTSN-SSLHAKPRKEELIAPCSTKKRKVLISESDQMQCVKKISEIASDAESSQPS 894
+ IDL ++ ++ H + + + P KK KV++ D
Sbjct: 811 AQVIDLAADVATSHLAGYRFKSLGP---KKAKVMVGSKD--------------------V 847
Query: 895 SFIPITNKVKHEKPQISDSGSRIIAQGSAPSKVDGTTYRI-EAEIQSEKSKGSHSSAPPC 953
F + K++H + +G + Q +A SK T+ + EKS G S+A P
Sbjct: 848 CFDDGSPKLQHNVESRALAGC-LGEQSTASSKKSNITHAPGNSGAIHEKSGGQESNAGP- 905
Query: 954 GGEETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAKLFAGPERLPLL 1013
AFL +EKLS EY++FV +MKA+K K M I L +IAKLF+ PERLPLL
Sbjct: 906 --------AFLKLAREKLSTAEYRDFVEYMKALKLKTMHIKDSLDAIAKLFSSPERLPLL 957
Query: 1014 RRFKDYVPAKYHPLYEQYL 1032
F+ +VP + LYEQ +
Sbjct: 958 EGFRVFVPKNHLSLYEQLV 976
>gi|449529467|ref|XP_004171721.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Cucumis sativus]
Length = 695
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/647 (72%), Positives = 543/647 (83%), Gaps = 1/647 (0%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRGIDV+FPF+AYDCQLVYMEKVIQSLQ KCNALLESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPRYTIRGIDVDFPFDAYDCQLVYMEKVIQSLQEKCNALLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
KSLG FS+ S N+Q +V SSQS K PTI+YT+RTHSQLRQVIQELK ++YR
Sbjct: 61 KSLGEFSSGRSVSNSQNIEGDPNVLSSQSTSPKHPTIVYTTRTHSQLRQVIQELKKTSYR 120
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
PKMV+LGSREQLCIH +VSLLRG QNNACR LC+K R C H++RV+ Y+K NPHLGD
Sbjct: 121 PKMVVLGSREQLCIHEDVSLLRGRTQNNACRSLCRKSGKRHCKHYNRVSGYVKENPHLGD 180
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
EPIDIEDLV IG++FGPCPY+++REL K VDI+FAPYNYLID +RK L +EWKNS+LIF
Sbjct: 181 EPIDIEDLVKIGKSFGPCPYYVSRELHKAVDIMFAPYNYLIDRGYRKSLVLEWKNSVLIF 240
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHNLE ICADAASFDL+S LLTACISEAKNCID+S RR +S+D++ NPDNFAILRAL
Sbjct: 241 DEAHNLESICADAASFDLTSWLLTACISEAKNCIDLSIKRRDESNDKSGNPDNFAILRAL 300
Query: 301 LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
LLKLEK I+++PI+SKELGFTKPGPYIYELLA+LNIT E+A KL I+E AA LL+EDK
Sbjct: 301 LLKLEKGISDIPIHSKELGFTKPGPYIYELLAELNITHESASKLKGIIEEAAILLEEDK- 359
Query: 361 QNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWC 420
Q K T CR+E+I++IL I+FR+K AH+ +Y+VHV+E +A+A D LKGKASRTLSWWC
Sbjct: 360 QQKIQNTGCRLENITDILDIVFREKDNAHAKFYQVHVQENEASAMDGLKGKASRTLSWWC 419
Query: 421 FNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP 480
FNPGIA++ F + EVGSIILTSGTLSP+DSFAQELKL+FP+R+ENPHVI+S QIWAG+V
Sbjct: 420 FNPGIALEAFPKKEVGSIILTSGTLSPLDSFAQELKLDFPIRLENPHVISSNQIWAGVVS 479
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
VGPSG NSSY NR+S YK +LGN IVN ARIVPDGLL+FFPSYY +DQCI+CWKN S
Sbjct: 480 VGPSGCSFNSSYWNRESEAYKLDLGNAIVNFARIVPDGLLVFFPSYYFLDQCISCWKNQS 539
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
+ TTIWERI KHKKPV+EPRQSSLFP +IEDYM KL+DTS+SGAVFFAVCRGKVSEGL
Sbjct: 540 LSSSTTIWERISKHKKPVIEPRQSSLFPSSIEDYMFKLEDTSSSGAVFFAVCRGKVSEGL 599
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
DFADHAGRAV+ITGMPFA+ DPKV +A GG K K
Sbjct: 600 DFADHAGRAVIITGMPFASRNDPKVLKHHGQPHPKASYCGGRAKPLK 646
>gi|242057873|ref|XP_002458082.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
gi|241930057|gb|EES03202.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
Length = 759
Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/750 (63%), Positives = 582/750 (77%), Gaps = 33/750 (4%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y+IRG+DV+FPF+AYDCQ+ YM++VI+SLQ NALLESPTGTGKTLCLLCA+LAWR
Sbjct: 1 MPVYRIRGVDVDFPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAWR 60
Query: 61 KSLGSFSTLGSQVNNQIS-----GSQSSVN------SSQSGDSKLPTILYTSRTHSQLRQ 109
++ G F +G + GSQ SV+ +SQ S+ P I+Y SRTHSQLRQ
Sbjct: 61 RTFGEFLRVGRGGGGGGTQQLPYGSQPSVSQQSEDSTSQQQQSRYPVIIYASRTHSQLRQ 120
Query: 110 VIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVA 169
VI+ELK ++YRPKM +LGSREQ+CIH EVS LRG AQNNAC FLCKK RRC H++ V+
Sbjct: 121 VIKELKATSYRPKMAVLGSREQMCIHNEVSKLRGRAQNNACHFLCKK---RRCPHNNHVS 177
Query: 170 DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL 229
++MKN P LG+EP DIEDL+NIGR GPCPY+++REL K+VDI+FAPYNYLIDP R+ L
Sbjct: 178 EFMKNKPELGNEPFDIEDLINIGRRKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSL 237
Query: 230 -GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG--QSSD 286
G+ W N++LIFDEAHNLE ICADAASFDL LTACI+EA CI + + +R +S+D
Sbjct: 238 NGIPWDNAVLIFDEAHNLESICADAASFDLFPNNLTACIAEAHECIKLCAAKRSIEKSAD 297
Query: 287 ETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLID 346
+ +P+N+AIL+ALL+ LEK+I E+ I SKELG+TK G YIY+ L++LNIT +T+ KLI+
Sbjct: 298 KQFDPENYAILKALLMALEKKIGELLIASKELGYTKAGSYIYDFLSELNITSDTSKKLIE 357
Query: 347 IVEVAAELLQEDKLQN-----KKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREAD 401
++ A+ LL+E + T R+ESI ++L IIFR G H+ YYR HV E+
Sbjct: 358 TIDGASLLLEEGNSAETGRGVQAKATVSRLESIRDMLDIIFRGGGQNHAKYYRFHVNESQ 417
Query: 402 ANAADVLK--GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
+ D LK GK+SRTLSWWCFNPG+AM+EF +L V SIILTSGTLSP+DS A EL L F
Sbjct: 418 QTSGDALKVLGKSSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLEF 477
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
P+R+ENPHVI+S QIW G+VPVGPSG+ LNSSYR R++I+YKQELG IVN ARIVPDGL
Sbjct: 478 PVRLENPHVISSDQIWVGVVPVGPSGHALNSSYRMRNTIQYKQELGTAIVNFARIVPDGL 537
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNL---TTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
L+FFPSY +MD C+ WKN +H N TIW+RICKHK+PV+EPRQSS F AIEDY A
Sbjct: 538 LVFFPSYSMMDMCVEFWKNRNHSNSASENTIWQRICKHKQPVIEPRQSSNFQSAIEDYRA 597
Query: 577 KLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
KL D S+SGA+FFAVCRGKVSEGLDFAD AGRAV++TGMPFAT TD KVRLKREYLD Q
Sbjct: 598 KLHD-SSSGAIFFAVCRGKVSEGLDFADRAGRAVIVTGMPFATPTDAKVRLKREYLDKQG 656
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
K TK L+GE+WY QQA+RAVNQAVGRVIRHRHDYGAI++CDERFA P+ +S
Sbjct: 657 TPSN---KNTKT--LTGEEWYVQQAARAVNQAVGRVIRHRHDYGAILYCDERFAWPNYQS 711
Query: 697 QISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
Q+S W++PHI+CYSK+G+VV LTRFFR++
Sbjct: 712 QMSYWLRPHIKCYSKYGEVVQGLTRFFRDK 741
>gi|414881660|tpg|DAA58791.1| TPA: hypothetical protein ZEAMMB73_410850, partial [Zea mays]
Length = 941
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/825 (59%), Positives = 609/825 (73%), Gaps = 39/825 (4%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRG++V+FPF+AYDCQ+ YM++VI+SLQ NALLESPTGTGKTLCLLCA+LAWR
Sbjct: 1 MPVYSIRGVNVDFPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAWR 60
Query: 61 KSLGSFSTLGSQ--------VNNQISGSQSSVNSS--QSGDSKLPTILYTSRTHSQLRQV 110
++ G F +G +Q S SQ S +S+ + S+ P I+Y SRTHSQLRQV
Sbjct: 61 RTFGEFLRVGRGGGGTKQLPYGSQPSASQQSEDSTSQKQQQSRYPVIIYASRTHSQLRQV 120
Query: 111 IQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD 170
I+ELK ++YRPKM +LGSREQ+CIH EVS L G AQNNAC FLCKK RRC H++ VA+
Sbjct: 121 IKELKATSYRPKMAVLGSREQMCIHDEVSKLHGRAQNNACHFLCKK---RRCPHNNHVAE 177
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL- 229
++KN P LG+EP DIEDL+NIGR GPCPY+++REL K+VDI+FAPYNYLIDP R+ L
Sbjct: 178 FIKNKPELGNEPFDIEDLINIGRHKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLN 237
Query: 230 GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG--QSSDE 287
G+ W N++LIFDEAHNLE ICADAASFDL LTACI+EA CI + S +R S+D+
Sbjct: 238 GIPWDNAVLIFDEAHNLESICADAASFDLFPNNLTACIAEAHECIKLCSAKRSIENSADK 297
Query: 288 TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDI 347
+P+N+AIL+ALL+ LEK+IAE+ I S ELG+TK G YIY+ L++LNIT +T+ KLI+
Sbjct: 298 QFDPENYAILKALLMALEKKIAELLIGS-ELGYTKAGSYIYDFLSELNITSDTSKKLIET 356
Query: 348 VEVAAELLQEDK-------LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA 400
++ A+ LL+E +Q K + + R+ESI ++L IIFR G H+ YYR HV E+
Sbjct: 357 IDCASLLLEEGNSAQTGPGVQAKAAVS--RLESIRDMLDIIFRGGGQNHAKYYRFHVNES 414
Query: 401 DANAADVLK--GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN 458
D LK GK+SRTLSWWCFNPG+AM+EF +L V SIILTSGTLSP+DS A EL L
Sbjct: 415 QQTHGDALKFLGKSSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLE 474
Query: 459 FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
FP+R+ENPHVI+S Q+W G+VPVGPSG+ LNSSYR R++I+YKQELG IVN ARIVPDG
Sbjct: 475 FPVRLENPHVISSDQVWVGVVPVGPSGHALNSSYRTRNTIQYKQELGTAIVNFARIVPDG 534
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNL---TTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
LL+FFPSY +MD C+ WKN +H N TIW+RICKHK+PV+EPRQSS F AIEDY
Sbjct: 535 LLVFFPSYSMMDMCVDFWKNRNHSNSASENTIWQRICKHKQPVIEPRQSSNFQSAIEDYR 594
Query: 576 AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
AKL D S+SGA+FFAVCRGKVSEGLDFAD AGRAV++TGMPFAT TD KVRLKREYLD Q
Sbjct: 595 AKLHD-SSSGAIFFAVCRGKVSEGLDFADRAGRAVIVTGMPFATPTDAKVRLKREYLDKQ 653
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
K TK+ L+GE+WY QQA+RAVNQAVGRVIRHRHDYGAII+CDERF P+ +
Sbjct: 654 GTPSN---KNTKM--LTGEEWYVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWPNYQ 708
Query: 696 SQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRELKPVDLLD 755
SQ+S W++PHI+CYSK+G+VV LTRFFR++ S L L T+ + + +L
Sbjct: 709 SQMSYWLRPHIKCYSKYGEVVQGLTRFFRDK--ASSDPLTLEPTDCNNCIAPPANKHMLK 766
Query: 756 KISLEEVPSSTPAVDQACYSLHEVKNRNTSSHSGEIVPANRSSLS 800
+ + S+ Q S + R+ +I PANRS+L+
Sbjct: 767 EKLSDLAASAQDECPQITLSGNSTMRRSNFMKLAQITPANRSTLT 811
>gi|5902361|gb|AAD55463.1|AC009322_3 Hypothetical protein [Arabidopsis thaliana]
Length = 912
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/805 (56%), Positives = 579/805 (71%), Gaps = 75/805 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRGI+VEFPFEAY Q++YM++VI+SLQNKC+ALLESPTGTGKTLCLLCATLAWR
Sbjct: 46 MPNYSIRGINVEFPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWR 105
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSK---LPTILYTSRTHSQLRQVIQELKTS 117
KSLGSFST + N+ I S S SQSG PTI+Y SRTHSQLRQVI+ELK S
Sbjct: 106 KSLGSFSTRKDRKNSAIPWSDSDEPLSQSGGGGGGAFPTIVYASRTHSQLRQVIKELKRS 165
Query: 118 NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPH 177
+YRPKMV+LGSREQLC++ EV+ LRG A NAC++LCKK R+CNH +R+ DY+K+NPH
Sbjct: 166 SYRPKMVVLGSREQLCVNEEVNSLRGKALTNACQYLCKKRGKRQCNHFNRLPDYLKHNPH 225
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSI 237
+GDEP+DIEDLVNIG+ GPCPY++TREL K VDI+FAPYNYLI +RK L V W NS+
Sbjct: 226 IGDEPVDIEDLVNIGKDSGPCPYYITRELHKDVDIIFAPYNYLISNGYRKFLKVNWTNSV 285
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAIL 297
LIFDEAHNLE +CAD+ASFDL S LL+ACISEA+ C+ +++ RR +D ++NP+NFAIL
Sbjct: 286 LIFDEAHNLESLCADSASFDLPSVLLSACISEAQECVQLAAARRDSLNDVSINPENFAIL 345
Query: 298 RALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
+ LLLKL++ I++VPI ++ GFTKPGPYIYE+L LNIT ETA KLI VE AA L+E
Sbjct: 346 KGLLLKLQELISKVPIPKRDEGFTKPGPYIYEMLKSLNITHETAPKLIGTVEEAAVFLEE 405
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
+K Q + ++E I+++LK+IFR+ G+ H ADV +
Sbjct: 406 EK-QRTATNAGSKLEIIADMLKLIFRENGSNH---------------ADVYR-------- 441
Query: 418 WWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAG 477
+I+ + + +FP+R+ENPHVI+S Q+WAG
Sbjct: 442 --------------------LIMETSFFGK--------RRDFPIRLENPHVISSNQLWAG 473
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
+V GPSGY+LNSSYRNRD EYKQELGN IVN +R+VP+GLLIFFPSYYLMD CI WK
Sbjct: 474 VVSTGPSGYVLNSSYRNRDVPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCITFWK 533
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
N + N T+WERICK KKPV+EP+ SSLFP A+ D+ KL+D +TSG VFFAVCRGKVS
Sbjct: 534 NGCYRNSMTVWERICKLKKPVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVS 593
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EGLDFAD AGRAVVITG+P+A +TDP+V+LKRE+LD QSQ + K + + LSG WY
Sbjct: 594 EGLDFADGAGRAVVITGLPYARVTDPRVKLKREFLD--EQSQLADVKLPRSTLLSGSMWY 651
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVY 717
+Q+A+RAVNQA+GRVIRHRHDYGAIIFCD+RF PS++S+ISLWI+P+++CYS++G+V+
Sbjct: 652 SQEAARAVNQAIGRVIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVKCYSRYGEVIS 711
Query: 718 TLTRFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAVDQACYSLH 777
L RFFR ER + +L+ + + V L PV+ S+E+ P TPA +
Sbjct: 712 DLARFFRTER--SNFPARLVTEQENNIVSTLLPVE-----SIEDNP--TPAFGNS----- 757
Query: 778 EVKN----RNTSSHSGEIVPANRSS 798
+KN +N S PANR+S
Sbjct: 758 NLKNVGVAQNELSRLEAFPPANRAS 782
>gi|302756033|ref|XP_002961440.1| hypothetical protein SELMODRAFT_77246 [Selaginella moellendorffii]
gi|300170099|gb|EFJ36700.1| hypothetical protein SELMODRAFT_77246 [Selaginella moellendorffii]
Length = 787
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/733 (60%), Positives = 559/733 (76%), Gaps = 23/733 (3%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP+YK++G+DV FP++AYDCQLVYME VI +LQ NALLESPTGTGKTLCLLCATLAWR
Sbjct: 2 MPSYKLKGVDVRFPYDAYDCQLVYMESVIAALQKGQNALLESPTGTGKTLCLLCATLAWR 61
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+SL G +++ S SSQ + KLPT++Y SRTHSQL+QVI ELK ++YR
Sbjct: 62 ESLAP-PDRGRRMSASSQSSDLDPTSSQEAN-KLPTVIYASRTHSQLQQVIHELKATSYR 119
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
PKMV LGSREQLCI ++V LRG AQNNACR CK R+C HH+RV +Y+KNNP LG+
Sbjct: 120 PKMVALGSREQLCIEKDVQKLRGRAQNNACRTSCKA---RKCYHHTRVNEYLKNNPELGN 176
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL-GVEWKNSILI 239
EPIDIEDLV IGRT GPCPYF++REL +VD++F PYNYLID RK L G+ W+NS++I
Sbjct: 177 EPIDIEDLVRIGRTHGPCPYFLSRELHGSVDMIFVPYNYLIDKENRKSLTGIRWENSVII 236
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS--SDETLNPDNFAIL 297
FDEAHNLEG+CADAASFDL + L+ACISEA C+++++ +R S +D++ + +NFA+L
Sbjct: 237 FDEAHNLEGVCADAASFDLPTTTLSACISEAGQCVELATLQRSISNNADKSGDSENFALL 296
Query: 298 RALLLKL-EKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
+ LL K+I ++ +S+ELGFT+PG YIY+ L++L IT ET+ L D ++ A LLQ
Sbjct: 297 KGALLLELSKKIDDISFDSEELGFTRPGSYIYDFLSELKITWETSTMLTDTIDSAISLLQ 356
Query: 357 EDKL--QNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASR 414
ED K T+ C++E + + + IFR K + H+ YRV V + + K SR
Sbjct: 357 EDSSAPSGKPKTSTCKLELLRDAFRTIFRGKDSTHATCYRVSVFK--------VCDKKSR 408
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
T SWWCFNPGIAM+EFS+L V +I+LTSGTLSP++SFA ELKL F +R+ENPHVI + QI
Sbjct: 409 TFSWWCFNPGIAMEEFSKLGVRTIVLTSGTLSPLESFAIELKLPFDVRLENPHVIGANQI 468
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
W G+V GPSG LNSSYR RDS EYK +LGNTIVN ARIVP+GLL+FFPSYYL++ C+
Sbjct: 469 WVGVVSSGPSGRALNSSYRTRDSPEYKNDLGNTIVNFARIVPNGLLVFFPSYYLLNSCVD 528
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ + N T+WERICKHK+PVVEP++S+LF A ED++AK+KD++ +GAVFFAVCRG
Sbjct: 529 SWQTPNQVNGHTLWERICKHKQPVVEPKESALFNQAHEDFLAKVKDSTGTGAVFFAVCRG 588
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEGLDFAD GRAV++TGMPFA TDPKVRLKR+YLD +G K + L+GE
Sbjct: 589 KVSEGLDFADETGRAVIVTGMPFAMKTDPKVRLKRQYLD----EEGRRTKTSTRKVLTGE 644
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
DWY QQASRAVNQAVGRVIRH++DYGAII CDERFA +SQ+SLW++PH++ YSKFGD
Sbjct: 645 DWYVQQASRAVNQAVGRVIRHKNDYGAIILCDERFAQAGAQSQLSLWLRPHVKLYSKFGD 704
Query: 715 VVYTLTRFFREER 727
+TLTRFF++++
Sbjct: 705 AAFTLTRFFKDKK 717
>gi|302776424|ref|XP_002971377.1| hypothetical protein SELMODRAFT_94786 [Selaginella moellendorffii]
gi|300161359|gb|EFJ27975.1| hypothetical protein SELMODRAFT_94786 [Selaginella moellendorffii]
Length = 792
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/732 (60%), Positives = 565/732 (77%), Gaps = 20/732 (2%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP+YK++G+DV FP++AYDCQLVYME VI +LQ NALLESPTGTGKTLCLLCATLAWR
Sbjct: 2 MPSYKLKGVDVRFPYDAYDCQLVYMESVIAALQKGQNALLESPTGTGKTLCLLCATLAWR 61
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+SL G +++ S SSQ + KLPT++Y SRTHSQL+QVI ELK ++YR
Sbjct: 62 ESLAP-PDRGRRMSASSQSSDLDPTSSQEAN-KLPTVIYASRTHSQLQQVIHELKATSYR 119
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
PKMV LGSREQLCI ++V LRG AQNNACR CK R+C HH+RV +Y+K NP LG+
Sbjct: 120 PKMVALGSREQLCIEKDVQKLRGRAQNNACRTSCKA---RKCYHHTRVNEYLKKNPELGN 176
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL-GVEWKNSILI 239
EPIDIEDLV IGRT GPCPYF++REL +VD++F PYNYLID RK L G+ W+NS++I
Sbjct: 177 EPIDIEDLVRIGRTHGPCPYFLSRELHGSVDMIFVPYNYLIDKENRKSLTGIRWENSVII 236
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS--SDETLNPDNFAIL 297
FDEAHNLEG+CADAASFDL + L+ACISEA C+++++ +R S +D++ +P+NFA+L
Sbjct: 237 FDEAHNLEGVCADAASFDLPTTTLSACISEAGQCVELATLQRSISNNADKSGDPENFALL 296
Query: 298 RALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
+ALLL+L K+I ++ +S+ELGFT+PG YIY+ L++L IT ET+ L D ++ A LLQE
Sbjct: 297 KALLLELSKKIDDISFDSEELGFTRPGSYIYDFLSELKITWETSTMLTDTIDSAISLLQE 356
Query: 358 DKL--QNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
D K T+ C++E + + + IFR K ++H+ YRV V + + K SRT
Sbjct: 357 DSSAPSGKPKTSTCKLELLRDAFRTIFRGKDSSHATCYRVSVFK--------VCDKKSRT 408
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
SWWCFNPGIAM+EFS+L V +I+LTSGTLSP++SFA ELKL F +R+ENPHVI + QIW
Sbjct: 409 FSWWCFNPGIAMEEFSKLGVRTIVLTSGTLSPLESFAIELKLPFDVRLENPHVIGANQIW 468
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
G+V GPSG LNSSYR RDS EYK +LGNTIVN ARIVPDGLL+FFPSYYL++ C+
Sbjct: 469 VGVVSSGPSGRALNSSYRTRDSPEYKNDLGNTIVNFARIVPDGLLVFFPSYYLLNSCVDS 528
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGK 595
W+ + N T+WERICKHK+PVVEP++S+LF A ED++AK+KD++ +GAVFFAVCRGK
Sbjct: 529 WQTPNQVNGHTLWERICKHKQPVVEPKESALFNQAHEDFLAKVKDSTATGAVFFAVCRGK 588
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGED 655
VSEGLDFAD GRAV++TGMPFA TDPKVRLKR+YLD + + K ++ L+GED
Sbjct: 589 VSEGLDFADETGRAVIVTGMPFAMKTDPKVRLKRQYLDEEGRRTKTITKPFQV--LTGED 646
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDV 715
WY QQASRAVNQAVGRVIRH++DYGAII CDERFA +SQ+SLW++PH++ YSKFGD
Sbjct: 647 WYVQQASRAVNQAVGRVIRHKNDYGAIILCDERFAQAGAQSQLSLWLRPHVKLYSKFGDA 706
Query: 716 VYTLTRFFREER 727
+TLTRFF++++
Sbjct: 707 AFTLTRFFKDKK 718
>gi|297597115|ref|NP_001043456.2| Os01g0592900 [Oryza sativa Japonica Group]
gi|53791584|dbj|BAD52706.1| DEAH helicase isoform 5-like [Oryza sativa Japonica Group]
gi|255673416|dbj|BAF05370.2| Os01g0592900 [Oryza sativa Japonica Group]
Length = 876
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/930 (52%), Positives = 624/930 (67%), Gaps = 82/930 (8%)
Query: 123 MVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP 182
M +LGSREQ+CIH EVS LRG QNNAC +LCKK R C HH+ VA++M+NN LG E
Sbjct: 1 MAVLGSREQMCIHEEVSKLRGRQQNNACHYLCKK---RWCRHHNSVAEFMRNNSELGSEA 57
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL-GVEWKNSILIFD 241
DIEDLVNIGRT GPCPY+++REL K+VDI+FAPYNYLIDP R+ L G+ W N++LIFD
Sbjct: 58 CDIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLNGIPWDNAVLIFD 117
Query: 242 EAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG--QSSDETLNPDNFAILRA 299
EAHNLE ICADAASFDL L++CI+EA+ CI + S +R S+D+ +P+N+AIL+A
Sbjct: 118 EAHNLESICADAASFDLLPNNLSSCIAEAQECIQLCSAKRTFENSADKQFDPENYAILKA 177
Query: 300 LLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK 359
LL+ LEK+I+EV I+SKELG TKPG YIYE L++LNIT ET+ KLID ++ A+ LL+E
Sbjct: 178 LLMALEKKISEVVIDSKELGHTKPGNYIYEFLSELNITSETSKKLIDTIDGASLLLEEGN 237
Query: 360 LQN-----KKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK--GKA 412
K T CR+E+I +IL IIFR G +H+ YYR HV E N+ D LK GK
Sbjct: 238 SAETGPGMKAKATVCRLETIRDILDIIFRGGGQSHAKYYRFHVNECQQNSGDALKVLGKV 297
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
SRTLSWWCFNPG+AM+EF +L V SIILTSGTLSP+DS A EL L FP+R+ENPHVI S
Sbjct: 298 SRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRLENPHVIASD 357
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
QIW G+VPVGPSG+ LNSSYR R++++YKQELG TIVN ARIVPDGLL+FFPSY +MD+C
Sbjct: 358 QIWVGVVPVGPSGHPLNSSYRTRETLKYKQELGITIVNFARIVPDGLLVFFPSYSMMDKC 417
Query: 533 IACWKNTSHGNLT---TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFF 589
I CWK+ +H N + TIW+RICKHK+PV+EPRQSS FP AIEDY AKL+D+ST+GA+FF
Sbjct: 418 INCWKDRNHENSSDEHTIWQRICKHKQPVIEPRQSSNFPNAIEDYAAKLRDSSTTGAIFF 477
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
AVCRGKVSEGLDFAD AGRAV++TGMPFAT TDPKVRLKR+YLD + K
Sbjct: 478 AVCRGKVSEGLDFADRAGRAVIVTGMPFATPTDPKVRLKRDYLDKLGSASNKNSKA---- 533
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCY 709
L+GE+WY QQA+RAVNQAVGRVIRHRHDYGAII+CDERF + +SQ+S W++P+I+CY
Sbjct: 534 -LTGEEWYVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWQNYQSQMSYWLRPYIKCY 592
Query: 710 SKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAV 769
K+G+VV LTRFFR++ S+ K +T+ + ++ V L DK +E S+
Sbjct: 593 KKYGEVVQGLTRFFRDKVSIDSS--KPNETDFNDNI-----VLLADKHKPQETISALAVT 645
Query: 770 -----DQACYSLHEVKNRNTSSHSGEIVPANRSSLSPYKGIWASELKNSSDLIQFEKKLL 824
+ S++ R+ +I PANRS+LS G ++ +LL
Sbjct: 646 TANENQRTALSVNPTTKRSNYIKFAQITPANRSTLSMKHGCSSTS------------QLL 693
Query: 825 LSGRKSIQYRDHEFIDLTSN-SSLHAKPRKEELIAPCSTKKRKVLISESDQMQCVKKISE 883
SG K D + IDL ++ ++ H + + + P KK KV++ D
Sbjct: 694 YSGDK--LSTDAQVIDLAADVATSHLAGYRFKSLGP---KKAKVMVGSKD---------- 738
Query: 884 IASDAESSQPSSFIPITNKVKHEKPQISDSGSRIIAQGSAPSKVDGTTYRI-EAEIQSEK 942
F + K++H + +G + Q +A SK T+ + EK
Sbjct: 739 ----------VCFDDGSPKLQHNVESRALAGC-LGEQSTASSKKSNITHAPGNSGAIHEK 787
Query: 943 SKGSHSSAPPCGGEETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAK 1002
S G S+A P AFL +EKLS EY++FV +MKA+K K M I L +IAK
Sbjct: 788 SGGQESNAGP---------AFLKLAREKLSTAEYRDFVEYMKALKLKTMHIKDSLDAIAK 838
Query: 1003 LFAGPERLPLLRRFKDYVPAKYHPLYEQYL 1032
LF+ PERLPLL F+ +VP + LYEQ +
Sbjct: 839 LFSSPERLPLLEGFRVFVPKNHLSLYEQLV 868
>gi|167999293|ref|XP_001752352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696747|gb|EDQ83085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/744 (60%), Positives = 564/744 (75%), Gaps = 27/744 (3%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MPTYK+ GI V+FP++AYDCQLVYME+VI SLQ NALLESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPTYKVAGISVQFPYDAYDCQLVYMERVISSLQQGRNALLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSL-------GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQE 113
+SL S + SQ + + S S +S ++ KLPTI+Y+SRTHSQL+QVI+E
Sbjct: 61 ESLIPLQQTSQSSQRVTSQSSQRGLMSLSQNDSEEALQPKLPTIVYSSRTHSQLQQVIRE 120
Query: 114 LKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM 172
LK + Y RPKMV+LGSREQ+CIHREV LRG AQN+ACR L K R C H++ VADY
Sbjct: 121 LKATVYSRPKMVVLGSREQMCIHREVQNLRGRAQNHACRSLTK---GRNCKHYNGVADYA 177
Query: 173 KNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL-GV 231
KN+P LG+EPIDIEDLV IG+T GPCPYF++REL + DI+F PYNYLI+ R+ L GV
Sbjct: 178 KNHPQLGEEPIDIEDLVKIGKTEGPCPYFLSRELHNSADILFVPYNYLIEKEMRRSLTGV 237
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG--QSSDETL 289
W +ILIFDEAHNL ICADAASFDL + L CI+EA +C+D++ RRG ++D ++
Sbjct: 238 SWGRTILIFDEAHNLARICADAASFDLPAAHLATCIAEASSCVDLALARRGSDNAADTSI 297
Query: 290 NPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVE 349
+PDNFA+L+ALLL+LEKRI EVPI S ELGFT+PGPYIYE LA++ IT ET LID ++
Sbjct: 298 DPDNFAVLKALLLELEKRINEVPIES-ELGFTRPGPYIYEFLAEIKITYETVSMLIDTID 356
Query: 350 VAAELLQEDKLQNKKSTTAC--RIESISNILKIIFRDKGTAHSAYYRVH-VREADANAAD 406
A LL ED ++K T R+ + + L+IIFRD +H+ Y+V +R A
Sbjct: 357 QATALL-EDGAKSKAGGTGTMYRLSTFRDALRIIFRDNNVSHAGSYKVTLIRSPGLFTAG 415
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
KG R LSWWCFNPG+AM+EFS++ V S+ILTSGTL+P++SFA EL L F +R+ENP
Sbjct: 416 NKKG---RMLSWWCFNPGLAMEEFSKMGVRSVILTSGTLAPLESFAIELNLAFDVRLENP 472
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HVI + Q+W G+V GPSG LNSSYR+RDSIEYK ELGNTIVN ARIVPDG+L+FFPSY
Sbjct: 473 HVIDASQVWVGVVSNGPSGRPLNSSYRSRDSIEYKLELGNTIVNFARIVPDGVLVFFPSY 532
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGA 586
YL++ CI W+ + G T+WERIC++K+PVVEP++S+LF A ED++AK+ D +++GA
Sbjct: 533 YLLNSCIEAWQTVTSGPAATVWERICRNKQPVVEPKESALFNQANEDFVAKINDPTSTGA 592
Query: 587 VFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET 646
+FFAVCRGKVSEGLDFAD +GRAVV+TG+PFA DPKVRLKRE+LD QA+S + T
Sbjct: 593 IFFAVCRGKVSEGLDFADRSGRAVVVTGIPFAMKMDPKVRLKREFLDEQARS-----RIT 647
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
K L+GE+WY QQASRAVNQAVGRVIRHR+DYGAII CDERF +SQ+SLW++P+I
Sbjct: 648 KHKVLTGEEWYVQQASRAVNQAVGRVIRHRNDYGAIILCDERFGQSGPQSQMSLWLRPYI 707
Query: 707 QCYSKFGDVVYTLTRFFREERICG 730
+ Y KFGD ++LTRFF++ G
Sbjct: 708 KTYHKFGDAAFSLTRFFKDRDTLG 731
>gi|110741966|dbj|BAE98923.1| hypothetical protein [Arabidopsis thaliana]
Length = 652
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/630 (66%), Positives = 511/630 (81%), Gaps = 4/630 (0%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRGI+VEFPFEAY Q++YM++VI+SLQNKC+ALLESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPNYSIRGINVEFPFEAYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSK---LPTILYTSRTHSQLRQVIQELKTS 117
KSLGSFST + N+ I S S SQSG PTI+Y SRTHSQLRQVI+ELK S
Sbjct: 61 KSLGSFSTRKDRKNSAIPWSDSDEPLSQSGGGGGGAFPTIVYASRTHSQLRQVIKELKRS 120
Query: 118 NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPH 177
+YRPKMV+LGSREQLC++ EV+ LRG A NAC++LCKK R+CNH +R+ DY+K+NPH
Sbjct: 121 SYRPKMVVLGSREQLCVNEEVNSLRGKALTNACQYLCKKRGKRQCNHFNRLPDYLKHNPH 180
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSI 237
+GDEP+DIEDLVNIG+ GPCPY++TREL K VDI+FAPYNYLI +RK L V W NS+
Sbjct: 181 IGDEPVDIEDLVNIGKDSGPCPYYITRELHKDVDIIFAPYNYLISNGYRKFLKVNWTNSV 240
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAIL 297
LIFDEAHNLE +CAD+ASFDL S LL+ACISEA+ C+ +++ RR +D ++NP+NFAIL
Sbjct: 241 LIFDEAHNLESLCADSASFDLPSVLLSACISEAQECVQLAAARRDSLNDVSINPENFAIL 300
Query: 298 RALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
+ LLLKL++ I++VPI ++ GFTKPGPYIYE+L LNIT ETA KLI VE AA L+E
Sbjct: 301 KGLLLKLQELISKVPIPKRDEGFTKPGPYIYEMLKSLNITHETAPKLIGTVEEAAVFLEE 360
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
+K Q + ++E I+++LK+IFR+ G+ H+ YRVHV+E + N+ DV+KGK SRTLS
Sbjct: 361 EK-QRTATNAGSKLEIIADMLKLIFRENGSNHADVYRVHVQELEQNSTDVMKGKVSRTLS 419
Query: 418 WWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAG 477
WWCF+PGI M + ++ VGSIILTSGTLSPMDS AQELKL+FP+R+ENPHVI+S Q+WAG
Sbjct: 420 WWCFSPGITMLDIAQKGVGSIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSNQLWAG 479
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
+V GPSGY+LNSSYRNRD EYKQELGN IVN +R+VP+GLLIFFPSYYLMD CI WK
Sbjct: 480 VVSTGPSGYVLNSSYRNRDVPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCITFWK 539
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
N + N T+WERICK KKPV+EP+ SSLFP A+ D+ KL+D +TSG VFFAVCRGKVS
Sbjct: 540 NGCYRNSMTVWERICKLKKPVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVS 599
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRL 627
EGLDFAD AGRAVVITG+P+A +TDP+V L
Sbjct: 600 EGLDFADGAGRAVVITGLPYARVTDPRVCL 629
>gi|357130391|ref|XP_003566832.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Brachypodium distachyon]
Length = 872
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/930 (51%), Positives = 615/930 (66%), Gaps = 87/930 (9%)
Query: 123 MVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP 182
M +LGSREQ+CIH EVS LRG AQNN C +LCKK R C H++ V +YM+NN LG EP
Sbjct: 1 MAVLGSREQMCIHDEVSKLRGKAQNNGCHYLCKK---RLCCHNNIVTEYMRNNSELGSEP 57
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL-GVEWKNSILIFD 241
DIEDLVNIGRT GPCPY+++REL K+VDI+FAPYNYLIDP R+ L G+ W N++LIFD
Sbjct: 58 FDIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLTGIPWDNAVLIFD 117
Query: 242 EAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG--QSSDETLNPDNFAILRA 299
EAHNLE ICADAASFDL LT+CI+EA+ CI + S +R S+D+ +P+N+AIL+A
Sbjct: 118 EAHNLESICADAASFDLLPHNLTSCIAEAQECIQLCSFKRSIENSADKQFDPENYAILKA 177
Query: 300 LLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQED- 358
LL+ LEK+++E+ I SKELG+TKPG YI+E L++LNIT ET+ KLI+ ++ A+ LL+E
Sbjct: 178 LLMALEKKVSELVIESKELGYTKPGSYIHEFLSELNITSETSKKLIETIDSASLLLEEGN 237
Query: 359 ----KLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK--GKA 412
K K T R+E+I ++L IIFR H+ YYR HV E+ + D L+ GKA
Sbjct: 238 SGETKAGVKAKATVSRLETIRDMLDIIFRGGRQDHAKYYRFHVNESRQASGDSLQLFGKA 297
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
+RTLSWWCFNPG+AM+EF +L V SIILTSGTLSP+DS A EL L FP+R+ENPHVI+
Sbjct: 298 TRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISPD 357
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
QIW G+VPVGPSG+ LNSSYR R++I+YKQELG IVN ARIVPDGLL+FFPSY +MD+C
Sbjct: 358 QIWVGVVPVGPSGHSLNSSYRTRETIKYKQELGLVIVNFARIVPDGLLVFFPSYSMMDKC 417
Query: 533 IACWKNTSHG---NLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFF 589
I WKN +H + TIW+R+CKHK+PV+EPRQSS FP AIEDY AKL+D+STSGA+FF
Sbjct: 418 IDFWKNRNHEHSVDENTIWQRMCKHKQPVIEPRQSSNFPDAIEDYAAKLRDSSTSGAIFF 477
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
AVCRGKVSEGLDFAD AGRAV++TGMPF+T TDPKVRLKR+YLD QA K
Sbjct: 478 AVCRGKVSEGLDFADRAGRAVIVTGMPFSTPTDPKVRLKRDYLDKQATPSNKNPKG---- 533
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCY 709
L+GE+WY QQA+RAVNQAVGRVIRHRHDYGAII+CDERF P+ +SQ+S W++P+I+CY
Sbjct: 534 -LTGEEWYVQQAARAVNQAVGRVIRHRHDYGAIIYCDERFVWPNYQSQMSYWLKPYIKCY 592
Query: 710 SKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAV 769
SK+G+VV TLT+FFR++ S+ K + + S V L DK S +++ S + A
Sbjct: 593 SKYGEVVQTLTKFFRDKVSLDSSKPKEMDCDDS-------IVPLADKYSPQDILSYSAAT 645
Query: 770 DQ-----ACYSLHEVKNRNTSSHSGEIVPANRSSLSPYKGIWASELKNSSDLIQFEKKLL 824
L+ R+ +I PANR++LS K Q
Sbjct: 646 AANEHRGTTVPLNVTTRRSNYMKFAQITPANRATLSSIK--------------QGCSSSS 691
Query: 825 LSGRKSIQYRDHEFIDLTSNSSLHAKPRKEELIAPCSTKKRKVLISESDQMQCVKKISEI 884
Q +D+T + L E + KKR KI+ I
Sbjct: 692 QLASSRDQLSQDSQVDMTMHGHL-----TEHSLKSLRLKKR-------------AKIAGI 733
Query: 885 ASDAESSQPSSFIPITNKVKH--EKPQISDSGSRIIAQGSAPSKVDGTTYRIEAEIQSEK 942
++DA +++K++H + P+ S +++ S + T E+ E+
Sbjct: 734 SNDA-----VGLHDVSSKLQHNVDLPRYQGERSTPLSKRSTIDEACETN-----EVIGER 783
Query: 943 SKGSHSSAPPCGGEETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAK 1002
S+ G+ T G AFL Q +EKL EY EFV MKA+KSK+M + L++IAK
Sbjct: 784 SR----------GQPTTGPAFLKQAREKLGTAEYGEFVELMKALKSKSMHMKDSLEAIAK 833
Query: 1003 LFAGPERLPLLRRFKDYVPAKYHPLYEQYL 1032
LF+ P RLPLL F+ +V + PLYEQ +
Sbjct: 834 LFSSPGRLPLLEGFRVFVSKNHLPLYEQLV 863
>gi|226494081|ref|NP_001152397.1| regulator of telomere elongation helicase 1 [Zea mays]
gi|195655863|gb|ACG47399.1| regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/621 (61%), Positives = 473/621 (76%), Gaps = 32/621 (5%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRG++V+FPF+AYDCQ+ YM++VI+SLQ NALLESPTGTGKTLCLLCA+LAWR
Sbjct: 1 MPVYSIRGVNVDFPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAWR 60
Query: 61 KSLGSFSTLGSQ--------VNNQISGSQSSVNSS--QSGDSKLPTILYTSRTHSQLRQV 110
++ G F +G +Q S SQ S +S+ + S+ P I+Y SRTHSQLRQV
Sbjct: 61 RTFGEFLRVGRGGGGTMQLPYGSQPSASQQSEDSTSQKQQQSRYPVIIYASRTHSQLRQV 120
Query: 111 IQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD 170
I+ELK ++YRPKM +LGSREQ+CIH EVS L G AQNNAC FLCKK RRC H++ VA+
Sbjct: 121 IKELKATSYRPKMAVLGSREQMCIHDEVSKLHGRAQNNACHFLCKK---RRCPHNNHVAE 177
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL- 229
++KN P LG+EP DIEDL+NIGR GPCPY+++REL K+VDI+FAPYNYLIDP R+ L
Sbjct: 178 FIKNKPELGNEPFDIEDLINIGRHKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLN 237
Query: 230 GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG--QSSDE 287
G+ W N++LIFDEAHNLE ICADAASFDL LTACI+EA CI + S +R S+D+
Sbjct: 238 GIPWDNAVLIFDEAHNLESICADAASFDLFPNNLTACIAEAHECIKLCSAKRSIKNSADK 297
Query: 288 TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDI 347
+P+N+AIL+ALL+ LEK+IAE+ I S ELG+TK G YIY+ L++LNIT +T+ KLI+
Sbjct: 298 QFDPENYAILKALLMALEKKIAELLIGS-ELGYTKAGSYIYDFLSELNITSDTSKKLIET 356
Query: 348 VEVAAELLQEDK-------LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA 400
++ A+ LL+E +Q K + + R+ESI ++L IIFR G H+ YYR HV E+
Sbjct: 357 IDCASLLLEEGNSAQTGPGVQAKAAVS--RLESIRDMLDIIFRGGGQNHAKYYRFHVNES 414
Query: 401 DANAADVLK--GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN 458
D LK GK+SRTLSWWCFNPG+AM+EF +L V SIILTSGTLSP+DS A EL L
Sbjct: 415 QQTHGDALKFLGKSSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLE 474
Query: 459 FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
FP+R+ENPHVI+S Q+W G+VPVGPSG+ LNSSYR R++I+YKQELG IVN ARIVPDG
Sbjct: 475 FPVRLENPHVISSDQVWVGVVPVGPSGHALNSSYRTRNTIQYKQELGTAIVNFARIVPDG 534
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNL---TTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
LL+FFPSY +MD C+ WKN +H N TIW+RICKHK+PV+EPRQSS F AIEDY
Sbjct: 535 LLVFFPSYSMMDMCVDFWKNRNHSNSASENTIWQRICKHKQPVIEPRQSSNFQSAIEDYR 594
Query: 576 AKLKDTSTSGAVFFAVCRGKV 596
AKL D S+SGA+FFAVCRGKV
Sbjct: 595 AKLHD-SSSGAIFFAVCRGKV 614
>gi|414881659|tpg|DAA58790.1| TPA: regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/621 (61%), Positives = 473/621 (76%), Gaps = 32/621 (5%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRG++V+FPF+AYDCQ+ YM++VI+SLQ NALLESPTGTGKTLCLLCA+LAWR
Sbjct: 1 MPVYSIRGVNVDFPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAWR 60
Query: 61 KSLGSFSTLGSQ--------VNNQISGSQSSVNSS--QSGDSKLPTILYTSRTHSQLRQV 110
++ G F +G +Q S SQ S +S+ + S+ P I+Y SRTHSQLRQV
Sbjct: 61 RTFGEFLRVGRGGGGTKQLPYGSQPSASQQSEDSTSQKQQQSRYPVIIYASRTHSQLRQV 120
Query: 111 IQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD 170
I+ELK ++YRPKM +LGSREQ+CIH EVS L G AQNNAC FLCKK RRC H++ VA+
Sbjct: 121 IKELKATSYRPKMAVLGSREQMCIHDEVSKLHGRAQNNACHFLCKK---RRCPHNNHVAE 177
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL- 229
++KN P LG+EP DIEDL+NIGR GPCPY+++REL K+VDI+FAPYNYLIDP R+ L
Sbjct: 178 FIKNKPELGNEPFDIEDLINIGRHKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLN 237
Query: 230 GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG--QSSDE 287
G+ W N++LIFDEAHNLE ICADAASFDL LTACI+EA CI + S +R S+D+
Sbjct: 238 GIPWDNAVLIFDEAHNLESICADAASFDLFPNNLTACIAEAHECIKLCSAKRSIENSADK 297
Query: 288 TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDI 347
+P+N+AIL+ALL+ LEK+IAE+ I S ELG+TK G YIY+ L++LNIT +T+ KLI+
Sbjct: 298 QFDPENYAILKALLMALEKKIAELLIGS-ELGYTKAGSYIYDFLSELNITSDTSKKLIET 356
Query: 348 VEVAAELLQEDK-------LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA 400
++ A+ LL+E +Q K + + R+ESI ++L IIFR G H+ YYR HV E+
Sbjct: 357 IDCASLLLEEGNSAQTGPGVQAKAAVS--RLESIRDMLDIIFRGGGQNHAKYYRFHVNES 414
Query: 401 DANAADVLK--GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN 458
D LK GK+SRTLSWWCFNPG+AM+EF +L V SIILTSGTLSP+DS A EL L
Sbjct: 415 QQTHGDALKFLGKSSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLE 474
Query: 459 FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
FP+R+ENPHVI+S Q+W G+VPVGPSG+ LNSSYR R++I+YKQELG IVN ARIVPDG
Sbjct: 475 FPVRLENPHVISSDQVWVGVVPVGPSGHALNSSYRTRNTIQYKQELGTAIVNFARIVPDG 534
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNL---TTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
LL+FFPSY +MD C+ WKN +H N TIW+RICKHK+PV+EPRQSS F AIEDY
Sbjct: 535 LLVFFPSYSMMDMCVDFWKNRNHSNSASENTIWQRICKHKQPVIEPRQSSNFQSAIEDYR 594
Query: 576 AKLKDTSTSGAVFFAVCRGKV 596
AKL D S+SGA+FFAVCRGKV
Sbjct: 595 AKLHD-SSSGAIFFAVCRGKV 614
>gi|320167785|gb|EFW44684.1| DEAH helicase isoform 6 [Capsaspora owczarzaki ATCC 30864]
Length = 1319
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/797 (42%), Positives = 489/797 (61%), Gaps = 98/797 (12%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
++ IRG+DVEFPF YDCQLVYME+VIQ LQ NALLESPTGTGKTLCLLCA L WR++
Sbjct: 6 SFTIRGVDVEFPFNPYDCQLVYMEQVIQCLQEGTNALLESPTGTGKTLCLLCAALGWRQA 65
Query: 63 LGSFSTLGSQVNNQISG-----------------------SQSSVNSSQSG--------- 90
+ L ++++N+ G + ++V S +G
Sbjct: 66 AVAAHQL-AKLDNRYGGLTLPSGDQQQPGDELVSSEAKAAAFAAVGKSLAGNFADDLSKR 124
Query: 91 -------------------DSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQ 131
DS +P I+Y+SRTHSQL Q I+EL+ ++Y+P I+GSREQ
Sbjct: 125 LGEASWSAKPGDKPSAVDGDSPVPRIIYSSRTHSQLAQAIKELQCTSYKPIASIIGSREQ 184
Query: 132 LCIHREVSLLR-GSAQNNACRFL-----CKKGTNRRCNHHSRVADYMKNNPHLGDEPIDI 185
+CIH EVS + S Q + CR L C N N SR + ++ +DI
Sbjct: 185 MCIHPEVSQVHIQSVQVHNCRKLVGLHSCSFYNNLERNKMSR---------DISNQVLDI 235
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHN 245
E LV + CPY+++R+LQ +I+F PYNYL+DP RK + NSI+IFDEAHN
Sbjct: 236 EGLVEV------CPYYLSRQLQNRGEIIFMPYNYLLDPTARKAANLNLANSIIIFDEAHN 289
Query: 246 LEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLE 305
LE IC D+ASF L+S + ISEA++C D+ S + S E PD+ +L+ +LL++E
Sbjct: 290 LESICEDSASFQLTSLDIAMAISEAQSCHDLVSDAKYIGSIE---PDDLLLLKKVLLRIE 346
Query: 306 KRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKS 365
IAE P++ ++ GFT G +I++L N+T ET +++++ E L E + ++
Sbjct: 347 SAIAETPLHPQD-GFTAHGTFIFDLFRSFNLTFETFSPVLELINSVIEALAEAR--GTRT 403
Query: 366 TTACRIESISNILKIIFRDKGTAH----SAYYRVHVREADA-----------NAADVLKG 410
+ + + +++LK +F ++ + YYR H+ + A + V
Sbjct: 404 SASISLSKFADVLKTMFTEENKVNMDGIRKYYRCHIGQEAAKPVTKASSGWGSTVHVAPS 463
Query: 411 KASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A RTLS+WCF+PG AM++ +++ V SIILTSGTLSP+ SF E++L FP+ +ENPHVI+
Sbjct: 464 AAGRTLSFWCFSPGFAMRDLTKIGVRSIILTSGTLSPLASFGAEMQLPFPITLENPHVIS 523
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
Q+W G+V GPS LNSS++ R Y +LG+ IVN ARIVPDGLL+FFPSY +M
Sbjct: 524 KSQLWCGVVSTGPSNCNLNSSFKTRSDESYLTDLGSAIVNYARIVPDGLLVFFPSYSVMT 583
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
QCI W+N S + +W+ + +HK V+EPR+ +LFP AI ++ AK++D + GAVFFA
Sbjct: 584 QCINHWQNRSGTSAKNVWDMLHQHKHAVIEPREKNLFPSAINEFYAKVRDPTIRGAVFFA 643
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
VCRGKVSEGLDFAD GRAV+ITG+P+ + DP+V++K++YLD E ++ ++
Sbjct: 644 VCRGKVSEGLDFADMNGRAVIITGIPYPALHDPRVKIKKQYLD----ENKAENLKSGIAA 699
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS 710
++G +WYNQ A+RAVNQA+GRVIRHR DYGAII CD RFA P +Q+ LW++P+++
Sbjct: 700 INGIEWYNQTAARAVNQAIGRVIRHRSDYGAIILCDSRFAAPGTIAQLPLWVRPYVKTCK 759
Query: 711 KFGDVVYTLTRFFREER 727
FGD + L +FF+ +
Sbjct: 760 NFGDSLAQLAQFFKTAK 776
>gi|260789809|ref|XP_002589937.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
gi|229275123|gb|EEN45948.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
Length = 823
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 347/790 (43%), Positives = 467/790 (59%), Gaps = 94/790 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M K+RG+DVEFPFE Y CQ YMEKVIQ LQ N +LESPTGTGKTLCLLCATLAWR
Sbjct: 1 MVFLKVRGVDVEFPFEPYACQRSYMEKVIQCLQEGTNGVLESPTGTGKTLCLLCATLAWR 60
Query: 61 -----------------KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDS--KLPTILYTS 101
K ST G + NQ+ G+ N+ Q+ ++P I+Y S
Sbjct: 61 SAYVAKMQFEGLKQQFTKDEDGQSTYGELLANQLGGAAGWGNTEQAAGPFMEIPKIIYAS 120
Query: 102 RTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRF-LCK-KGT 158
RTHSQL Q + ELK ++Y K+ ILGSREQLCIH EV NN+ + +CK K +
Sbjct: 121 RTHSQLSQAVAELKNTSYSNLKVCILGSREQLCIHPEVQ----EQTNNSTKVHMCKAKTS 176
Query: 159 NRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYN 218
+R C ++ + N + P+DIEDLV +G+ CPYFM REL+ + DI+F PYN
Sbjct: 177 SRLCTFYNNLDG---NEKEFTEAPLDIEDLVKVGKKHKVCPYFMARELKSSADIIFMPYN 233
Query: 219 YLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS 278
YL+DP RK V+ K+ I++FDEAHNLE +C +++SFDL+S L +C+ E N
Sbjct: 234 YLLDPKSRKAHSVDLKSHIVVFDEAHNLEKMCEESSSFDLTSYDLASCVEELDNL----- 288
Query: 279 TRRGQSSDETLNPD--------------------NFAILRALLLKLEKRIAEVPINSKEL 318
+ + E LN N + L +LL+LEK+I +P+ +
Sbjct: 289 -HKSVAEIEVLNEKFHTESSTHGLVCLYDFYFLLNVSFLVGMLLELEKKIDSLPLPANGT 347
Query: 319 GFTKPGPYIYELLADLNITQETAYKLIDIVE-VAAELLQEDKLQNKKSTTACRIESISNI 377
G T+PG +IYEL A+L IT +TA L+++++ V A A + + ++
Sbjct: 348 GLTRPGSFIYELFAELQITFDTAPILLEVLDKVVAYATTNTGTSVVFGNKAAGVSKLGDV 407
Query: 378 LKIIFRDKGTAH----------SAYYRVHVR-------EADANA------ADVLKGKASR 414
LKI F +A + YY+V+V+ ++ ANA + K R
Sbjct: 408 LKIAFSHDSSASQKGSKLANLMAKYYKVYVKTEEGFQKKSKANADPWATTSSSKPKKQGR 467
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
TLS+WCF+PG AMQ+ + V SIILTSGTLSP++SF E+ ++FP+ +ENPHVI Q+
Sbjct: 468 TLSYWCFSPGHAMQDLANHGVRSIILTSGTLSPLESFTAEMHIDFPVHLENPHVIERHQV 527
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
W G+V GP G LNSSY NR+S +Y LGN IVN ARIVP+GLL+FFPSY +M++C+
Sbjct: 528 WLGMVTKGPDGVRLNSSYENRNSTDYINSLGNAIVNFARIVPNGLLVFFPSYPVMNKCLE 587
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+++ N RI ++K VVEPR + F A+E + K+ D + +GA FFAVCRG
Sbjct: 588 VWQDSGISN------RISQYKTMVVEPRGKTQFVEAMEQFYEKINDPTLNGAAFFAVCRG 641
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEGLDFAD GRAVVITG+PF DPKV LK +LD + G L+G
Sbjct: 642 KVSEGLDFADINGRAVVITGLPFPPRMDPKVMLKMSFLDEGKTASKG---------LTGR 692
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
WY QQASRAVNQA+GRVIRHR DYGAI+ CD RF + ++Q+ W++P+ Y+ FG
Sbjct: 693 QWYRQQASRAVNQAIGRVIRHRQDYGAILLCDHRFTYADARAQLPSWVRPYATTYNTFGH 752
Query: 715 VVYTLTRFFR 724
+ L FF+
Sbjct: 753 AIKDLISFFK 762
>gi|307108093|gb|EFN56334.1| hypothetical protein CHLNCDRAFT_144794 [Chlorella variabilis]
Length = 1763
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 339/812 (41%), Positives = 482/812 (59%), Gaps = 105/812 (12%)
Query: 8 GIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG--- 64
G++VEFPFEAY CQL YM KVIQ+LQ +ALLESPTGTGKTLCLLCATLAWR+SL
Sbjct: 283 GVEVEFPFEAYPCQLDYMTKVIQALQEGQHALLESPTGTGKTLCLLCATLAWRQSLTTQA 342
Query: 65 ------SFSTLGSQVNNQISGS-----------QSSVNSSQSG-DSKLPTILYTSRTHSQ 106
+ + +G NQ S + + ++ G S LP I+Y+SRTHSQ
Sbjct: 343 RPASHPAAAAVGEVQANQHSSTLVQGLREAWAEHRATKMAEGGPGSGLPQIVYSSRTHSQ 402
Query: 107 LRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHS 166
L+QV++ELK+ +Y+P+ + SR+ C+H VS ++ A N ACR L K R C ++
Sbjct: 403 LQQVMRELKSCSYKPRTATVASRQHGCLHPVVSTMQAGA-NQACRALVSK---RACKWYN 458
Query: 167 RVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V +++ NP E +DIEDL IG + CPY++ RE+ T DIVF PYNYL+D R
Sbjct: 459 GVEKFVRQNPDANAEVLDIEDLGRIGESRTVCPYYLAREMAATADIVFMPYNYLLDAKTR 518
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR----- 281
GLG+ W++++LIFDEAHN+E +C+D+ SFDL + L + I E ++++ +
Sbjct: 519 TGLGIAWQSAVLIFDEAHNVEQVCSDSMSFDLPAAALASAIEELGTAAEVAANKGDAPIN 578
Query: 282 ------GQSSDETLNPDNFAI--LRALLLKLEKRIA-------------EVPINSKELGF 320
GQ + +L + RA+L +LE+ +A P ++ G
Sbjct: 579 VFNELGGQDRNISLASVAAELHRARAVLCRLEQEVAGLVKPGSGEAAWQHTPAAQRDAGL 638
Query: 321 TKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQ-----NKKSTTACRIESIS 375
T+PG +++ELL I +T L ++ A +L E+ ++ +++T C + ++
Sbjct: 639 TRPGAFLFELLGRCGINSQTWRVLQQCLDTAMSVLTEEAVEAGRRSGSRASTYC-LHQVA 697
Query: 376 NILKIIFRDKGT--------------------------------AHSAYYRVHVR-EADA 402
L++ F A A YRVHV E
Sbjct: 698 EALRLAFVGTAAGPEEPPPPLASSGGQWPPPQAVLQQLAAPQVPASHAAYRVHVHLEKSK 757
Query: 403 NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
N G+ + TLS+WCF+PG++MQ+ + ++V SI+LTSGTLSP+DSFA EL L FP+R
Sbjct: 758 N------GRVTPTLSYWCFSPGLSMQQLTDMKVRSILLTSGTLSPLDSFAHELGLPFPIR 811
Query: 463 VENPHVITSKQ---IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
+ENPHVI +Q +W G+VP GPSG+ LNSSY+NR++ Y+ +LG +VN RI+PDGL
Sbjct: 812 LENPHVIAKEQASGVWVGVVPTGPSGHALNSSYQNRENAAYRSDLGQALVNFCRIIPDGL 871
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
L+FF SY + C+A WK +IWERI K K+PV+EPR+S+ F A D+ AKL
Sbjct: 872 LVFFTSYAQLQSCVATWKQVPSSGGPSIWERIAKSKQPVIEPRESAAFNAAALDFRAKLL 931
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
+ + +GA FFAV RGK+SEGLDF+D AGRAVV+TG+P+A DPKVRLK+E L+ +A+S
Sbjct: 932 NPAYNGAAFFAVTRGKLSEGLDFSDAAGRAVVLTGIPYAMRHDPKVRLKQEVLN-EARSA 990
Query: 640 GGEYKETKLSF-----LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
+ + LSG+ WY+Q A RAVNQAVGRVIRH DYGAII CDERF P+
Sbjct: 991 PRKRGAAGGASAAPQGLSGDQWYSQNAMRAVNQAVGRVIRHARDYGAIILCDERFKSPNV 1050
Query: 695 KSQISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
+ Q+S W++ + +G +L +FF+++
Sbjct: 1051 QRQLSCWLRGQVAVCPTYGAANSSLVQFFKQQ 1082
>gi|384253151|gb|EIE26626.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 812
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 340/741 (45%), Positives = 479/741 (64%), Gaps = 29/741 (3%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MPTY IRGI+V+FP EAY+CQ+ YME+VI +LQ NALLESPTGTGKTLCLLCATLAW+
Sbjct: 1 MPTYSIRGIEVQFPHEAYECQVTYMERVITALQEGKNALLESPTGTGKTLCLLCATLAWQ 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSS--QSGD-SKLPTILYTSRTHSQLRQVIQELKTS 117
+SL + +++N IS ++ S + +SGD S PTI+Y SRTHSQL Q +
Sbjct: 61 ESLKQ-GKVTKKMHNHISHTKKSFGLTDLRSGDLSATPTIIYASRTHSQLAQTLWRW--- 116
Query: 118 NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPH 177
RP+ ILGSR+Q+C++ V L G A N ACR ++R C+ +++V + + +P
Sbjct: 117 -CRPRAAILGSRQQMCLNPGVKRLPGGAMNQACR---AHVSSRTCSWYNKVESWTRMHPD 172
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG-VEWKNS 236
E +DIE+LV +G + GPCP++++R++ T IVF PYNYL+D R G+ + W N+
Sbjct: 173 ANGEALDIEELVRLGSSGGPCPFYLSRDMASTAQIVFMPYNYLVDAKIRGGIKMLSWDNA 232
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
+L+FDEAHN+EG+C+DAASFDL+ LL + + + ++++ +R E + +
Sbjct: 233 VLVFDEAHNVEGVCSDAASFDLTGALLGTALQDVQAAVEVALLKR---DGEAQLIQDLRM 289
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
L ALL KLE IA + ++ G+T G +++ELLA + + + + + +++ AA+LL
Sbjct: 290 LGALLSKLEGAIASLAASAGNNGYTAKGEFLFELLAKIGLNTDNHFYMERLLDEAADLLS 349
Query: 357 EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTL 416
+ + ++ L + K S Y + + A G+ TL
Sbjct: 350 GAAAEQGRRWAPQFLQIDELFLLTFYCSKSVFASQGYAICCLFWKSKWAHGC-GQEVPTL 408
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWA 476
S+WCF PG+AM L+V I+LTSGTL+P+DSFAQEL L+FP+ +ENPHV+ + Q+W
Sbjct: 409 SYWCFEPGVAMAALCALKVRCILLTSGTLAPLDSFAQELSLDFPVTLENPHVVNTSQVWV 468
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
G+VPVGP G +LNSSY R S Y ++LG + N ARIVPDGLL+FF SY +++ C+ W
Sbjct: 469 GVVPVGPKGVVLNSSYATRTSPAYMEDLGLALANWARIVPDGLLVFFASYTVLEACLRHW 528
Query: 537 KNTSH-------GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFF 589
K S G T+W+RI + K+ V+EPR+S F A +DY AKLKD S+ GA+FF
Sbjct: 529 KANSGDQRGGVLGFNGTLWDRIVRDKQAVIEPRRSEEFQAAADDYRAKLKDPSSRGAIFF 588
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
AVCRGKVSEGLDF+D AGRAVVITG+PFA +TDPKVRLK+E LD + + G K T+
Sbjct: 589 AVCRGKVSEGLDFSDRAGRAVVITGLPFAMVTDPKVRLKKEVLD-ETRRSAGAAKRTRDG 647
Query: 650 F-----LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQP 704
L+GE WY+QQA+RAVNQA+GRVIRH HDYGAII DERF + + Q+S W++P
Sbjct: 648 AAPALRLTGEAWYSQQATRAVNQAMGRVIRHMHDYGAIILADERFKSETNQRQLSKWLRP 707
Query: 705 HIQCYSKFGDVVYTLTRFFRE 725
+ ++ FG+ +L RFF +
Sbjct: 708 LSKTHTNFGEAAASLQRFFAD 728
>gi|302829651|ref|XP_002946392.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
gi|300268138|gb|EFJ52319.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
Length = 700
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 336/733 (45%), Positives = 452/733 (61%), Gaps = 46/733 (6%)
Query: 5 KIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+I GI VEFPFE Y CQ YME VI++LQ NALLESPTGTGKTLCLLC+TLAWR+SL
Sbjct: 1 QIAGIPVEFPFEPYACQRNYMESVIKALQEGRNALLESPTGTGKTLCLLCSTLAWRESLK 60
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY--RPK 122
++S S +G +LP I+Y+SRTHSQL QV++EL+ S+Y R +
Sbjct: 61 V--------------GRTSWMSGGAGKPELPIIIYSSRTHSQLAQVMKELRNSSYKDRVR 106
Query: 123 MVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV--ADYMKNNPHLGD 180
+L SR+Q C+H + L G A N AC+ L + R+C+ H+++ Y L
Sbjct: 107 STVLSSRQQTCLHPTANKLSGGAANQACKALT---SARKCSWHNQLKFGKYRNAAASLVS 163
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG--VEWKNSIL 238
DIE+LV +G+T G CP+F+ R+ K DIVF PYNYL+DP R+ + + W N+++
Sbjct: 164 SVPDIEELVTVGKTHGVCPFFLGRDAGKEADIVFLPYNYLLDPATRRTMADSINWNNAVV 223
Query: 239 IFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDET--LNPDNF-A 295
IFDEAHN+E + +DA SFD+++ LT + EAK + R Q E LNP +
Sbjct: 224 IFDEAHNVESVSSDACSFDITAKQLTDAMLEAKRWAGGETAGRRQEGREGTELNPPMYDG 283
Query: 296 ILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELL 355
+ + + A P G T+PG +++E L L IT + L ++ AA
Sbjct: 284 FMHSFTVA-----AWCPFLVCIGGLTRPGSFLFEFLGQLGITAHSLSALNGAIDAAA--- 335
Query: 356 QEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
+ +C + S + + R +RVHV + AD L T
Sbjct: 336 -----DTLAAADSCLNLAFSTLEPLTDRPGAPPAHKGFRVHVHMQKSWGADKLPAP---T 387
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
LS+WCF PG+A + + L + S +LTSGTLSPMDSFA EL++ F +R+ENPHVI Q+W
Sbjct: 388 LSYWCFIPGMAFRRLAALRLRSFLLTSGTLSPMDSFAGELQIPFQVRLENPHVIEPSQVW 447
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
G++P GPSG LNS+Y +RDS YK ELGN +VN+AR+VPDGLL+FF SY MD I
Sbjct: 448 VGVLPTGPSGAPLNSTYASRDSATYKDELGNALVNVARLVPDGLLVFFASYAAMDSAINH 507
Query: 536 WK-NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
WK N G + + WERI +HK PVVEPR+SS F AIE++ +KL D +T GAVFFAVCRG
Sbjct: 508 WKQNGGAGGVGSTWERIVRHKAPVVEPRESSAFGAAIEEFRSKLDDPATQGAVFFAVCRG 567
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ---SQGGEYKETKLSFL 651
KVSEGLDF+D AGRAVVITG+P+A DPKVRLKR+ LD +A+ S + L
Sbjct: 568 KVSEGLDFSDRAGRAVVITGIPYAVKNDPKVRLKRDVLDEEARALSSGSSALAGEGVEPL 627
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
+GE WY A RAVNQA+GRVIRHR+DYGAI+ D+RF +P+ + +S W++ H+ Y +
Sbjct: 628 TGEAWYTNTAMRAVNQAMGRVIRHRYDYGAILLADDRFRNPNTQRNMSRWVREHVVVYDR 687
Query: 712 FGDVVYTLTRFFR 724
FG +LT+FF+
Sbjct: 688 FGTASASLTKFFK 700
>gi|348685651|gb|EGZ25466.1| hypothetical protein PHYSODRAFT_485995 [Phytophthora sojae]
Length = 1080
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 338/749 (45%), Positives = 466/749 (62%), Gaps = 39/749 (5%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M +I GI VEFPF YD QLVYMEKV+ +L +K NA+LESPTGTGKTLCLLCATLAWR
Sbjct: 1 MVRLEICGIPVEFPFPPYDSQLVYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSS----------QSGDSKLPTILYTSRTHSQLRQV 110
+ L TLG S +Q +S +S +LP I+Y+SRTHSQL+QV
Sbjct: 61 RQLQK--TLGKSAMATSSAAQQRPGASLAYEGYGSDGESDAPQLPRIIYSSRTHSQLKQV 118
Query: 111 IQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD 170
+QELK ++YRP + +LGSRE LC++ +VS LRG+ QN ACR CK +RRC +
Sbjct: 119 VQELKNTSYRPNVAVLGSREHLCVNEKVSKLRGTRQNLACRSTCK---DRRCMYKLGFDA 175
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
Y K + +DIE+LV + CP+F+TR + +I+F PYNYLIDP R+ +G
Sbjct: 176 YAKRSKKQAQPIMDIEELVTTMKEKTICPFFLTRNMLPEAEIIFVPYNYLIDPLARRSIG 235
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ-SSDETL 289
+ +NSILIFDEAHN+E I ++AAS+ LSS ++ CISE I Q + L
Sbjct: 236 ISIENSILIFDEAHNVESIASEAASYALSSNDISGCISEVDTFIRALQNNSVQLQAGSNL 295
Query: 290 NPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVE 349
++ LRAL +++ K + P++S GFTKPG YI+E N+ ET +++++E
Sbjct: 296 TMESTQTLRALFMEINKGLNGFPLSSSG-GFTKPGQYIFEFFEQFNVNFETCPLVLNMIE 354
Query: 350 VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY--YRVH---VREADANA 404
E+++ + A +++++ + L IFR K A YRVH VRE +NA
Sbjct: 355 ---EIIEVAHGGDDSQRAASKLDTMLSFLGTIFRSKEQHLQAAKNYRVHIQEVRERPSNA 411
Query: 405 ADVLKG-----KASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
+ G +R ++WCF+PG+A +E V ++ILTSGTLSP+D+ +EL ++F
Sbjct: 412 GRLFNGGRNKKTTTRVFNYWCFHPGVAFREICANNVHNVILTSGTLSPLDTTVKELGIDF 471
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
P+R+EN HV+ + Q+W G+V G +G LNSSY R + Y ELGNTIVN R+VP GL
Sbjct: 472 PVRLENNHVVDADQVWVGVVGTGVTGKRLNSSYNFRSTETYLLELGNTIVNFTRLVPHGL 531
Query: 520 LIFFPSYYLMDQCIACWKNTSHG-NLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
L+FFPSY ++++ I WK + G + +IW+RI + K+ VEPR + F +++Y +
Sbjct: 532 LVFFPSYSILEESIDKWKRPAAGESALSIWDRIVQQKQTFVEPRGRADFKAVVDEYHQAI 591
Query: 579 KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
D + GAVFFAVCRGKVSEG+DF++ GRAVVITG+PF DPK+ LK+ LD +A
Sbjct: 592 TD-NPKGAVFFAVCRGKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIVLKKSILD-EAMV 649
Query: 639 QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
GE K L+G WY QQASRAVNQA+GRVIRHRHDYGAII DERF ++ +
Sbjct: 650 PPGELK------LTGNAWYIQQASRAVNQAIGRVIRHRHDYGAIILLDERFVLKQQQECL 703
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREER 727
S W+QP+ +G+ LTRFF+ +
Sbjct: 704 SKWLQPYCHTCRGYGESHIGLTRFFKNNK 732
>gi|156379412|ref|XP_001631451.1| predicted protein [Nematostella vectensis]
gi|156218492|gb|EDO39388.1| predicted protein [Nematostella vectensis]
Length = 1082
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 324/773 (41%), Positives = 472/773 (61%), Gaps = 71/773 (9%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL-- 63
+R +DV+FPF+ YDCQ+ YMEKVI+ LQ + NA+LESPTGTGKTLCLLCATLAWR+S
Sbjct: 4 VRKVDVDFPFKPYDCQVAYMEKVIECLQTRKNAVLESPTGTGKTLCLLCATLAWRQSYVA 63
Query: 64 -----------------GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQ 106
G +LG+++ SG+ S++ + ++P I+Y SRTHSQ
Sbjct: 64 NLQLQQRGLCAAKEEEDGFQKSLGNKLAEAASGTWDDSCSNKGSNFEIPKIIYASRTHSQ 123
Query: 107 LRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHS 166
L Q +QELK + YRP++ I+GSREQLCI+ +V L + S N+A +C+ R H
Sbjct: 124 LSQAVQELKATVYRPRVSIIGSREQLCINSDV-LKQDS--NSAKVHMCRAKVTARTCHFY 180
Query: 167 RVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
+ K+NP E +DIEDLV +G+ CPY+M REL+ + DI+F PYNYL+DP R
Sbjct: 181 NNLEGNKSNPAFTTEILDIEDLVRLGQKHKVCPYYMARELKTSADIIFMPYNYLLDPKSR 240
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR----- 281
K ++ SI++FDEAHNLE +C + SFDL+S + +C+ + C++ +
Sbjct: 241 KAHNLDISGSIVVFDEAHNLEKVCEETVSFDLTSFDIASCVEDVLLCMEYVANAEDDPDI 300
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETA 341
G+ + ++P++ +L+AL KLE+ I ++ + S + + PG +++ELL ++ I T
Sbjct: 301 GEGGTD-IDPEDLKVLKALFSKLEEEIDQIQLPS-DGSKSFPGDFMFELLGNVGIKPNTK 358
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR--DKGTAHSAYYRVHVR- 398
++++ +E LL + L+ K ++ ++ L+I+F DKG ++VHV+
Sbjct: 359 DRVLETLEKINTLLA-NGLRGKHFA----LQKFTDALQIVFNKTDKGPKSGNSFKVHVQV 413
Query: 399 EADAN----AADVL--------KGKAS--------RTL---SWWCFNPGIAMQEFSRLEV 435
E D+ D+ KG +S RT+ +WCF+PG AM++ V
Sbjct: 414 EPDSKKKQKGLDIWTSGSKLSKKGTSSLYFYSFFMRTMIMIHYWCFSPGHAMKDLMSQGV 473
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+ILTSGTLSP++SF E+++ FP+R+ENPHVI Q+ +V P G LNSSY R
Sbjct: 474 SSVILTSGTLSPLNSFTAEMQIPFPIRLENPHVIEKHQMMVAVVTKAPDGATLNSSYEFR 533
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ Y LGNTI N AR +P+GLL+FFPSY +M++C+ W+NT IW R+ ++K
Sbjct: 534 STPGYMTGLGNTIANFARTIPNGLLVFFPSYPVMNKCLEHWQNTG------IWARLSQYK 587
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
EPR F +ED+ AK+ D S +GA FFAVCRGKVSEGLDF+D GRAVVITG+
Sbjct: 588 PMFAEPRGKGDFVQTMEDFYAKINDPSLNGATFFAVCRGKVSEGLDFSDINGRAVVITGL 647
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PF M D KV+LK +LD ++ ++ + L+G +WY QQASRAVNQAVGRVIRH
Sbjct: 648 PFPPMMDAKVKLKMSFLDEMSRKD-----KSAIKGLTGREWYRQQASRAVNQAVGRVIRH 702
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERI 728
R D+GAI+ CD RF +P ++ W++P ++ + +FG V L +FFR+ I
Sbjct: 703 RQDFGAILLCDVRFTYPDALRELPSWVKPQVKIFKEFGHVQRELIQFFRKADI 755
>gi|196008361|ref|XP_002114046.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
gi|190583065|gb|EDV23136.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
Length = 702
Score = 607 bits (1565), Expect = e-170, Method: Compositional matrix adjust.
Identities = 331/750 (44%), Positives = 440/750 (58%), Gaps = 57/750 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M +RGI+V+FPF Y CQL YM VIQ LQ N +LESPTGTGKTLCLLCA LAWR
Sbjct: 1 MVLVDVRGIEVDFPFNPYPCQLDYMTNVIQCLQEGKNGILESPTGTGKTLCLLCACLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ T +QV + + + D +P I+Y+SRTHSQL QV+ ELK + YR
Sbjct: 61 Q------TYVAQVQLNQRIQMQQLQQNPNTDRNMPKIIYSSRTHSQLSQVVNELKHTIYR 114
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
PK+ ILGSREQ+CIH EV+ L+ N A C+ N R H + K++P +
Sbjct: 115 PKICILGSREQMCIHPEVAKLQS---NTAKIHACRAKVNARTCHFCNNVETKKDDPSFSE 171
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
+DIE+LV +G CPY+M REL+ DIVF PYNYLID R+ ++ KN+I+I
Sbjct: 172 NILDIEELVELGGKQKVCPYYMARELRSNADIVFMPYNYLIDFKSRQSNSIDMKNAIIIC 231
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI----SSTRRGQSSDETLNPDNFAI 296
DEAHNLE IC D+ASFDLSS + CI E N I+I ST + D T N
Sbjct: 232 DEAHNLEKICEDSASFDLSSADIANCIDEVDNFINILQRIKSTTDSEEYDATGMRCNVNN 291
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
L L ++ + YIYE+ LN+T ET + + ++ +
Sbjct: 292 LYCLTMR----------------YVIESSYIYEIFKQLNVTFETKHLFVQVLGKCIDATV 335
Query: 357 EDKLQNKKSTTACRIESISNILKIIFRD----KGTAHSAYYRVHVREADANAADVLKGKA 412
D + +E + +IL +IF D + YY+V + D
Sbjct: 336 SDSKTLRAKHFG--LEKVLDILTVIFLDLSSGSSSNSQRYYKVII--YIETLIDYYSSNC 391
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
R LS+WCF+P +M+E EV ++ILTSGTLSP++S E +++FP++++NPHVI K
Sbjct: 392 CRILSYWCFSPSYSMKELIDQEVRAVILTSGTLSPIESLVAEFQVSFPVQLQNPHVIDKK 451
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
QIW G V GP G LNSSYRNR S EY LGNTIVN ARI+PDGLL+FFPSY +M+ C
Sbjct: 452 QIWIGTVSKGPCGTALNSSYRNRSSAEYLSSLGNTIVNFARIIPDGLLVFFPSYPVMNSC 511
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
I W+++ IW+RIC+HK +EP+ S F +++Y + ++D + SGA+F VC
Sbjct: 512 IEHWQSSG------IWDRICQHKSLHIEPQHKSEFNRVMDEYYSSVRDENCSGAIFLGVC 565
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGKVSEG+DFAD GRAV+ITG+PF + KV LK +YLD + +KE K +
Sbjct: 566 RGKVSEGVDFADINGRAVIITGLPFPPSKEAKVMLKMQYLD-----ENIGFKEHKS--IC 618
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF 712
G DWY QQASRAVNQA+GRVIRHR+DYGAII CDERF SQ+ W++ ++Q Y F
Sbjct: 619 GRDWYRQQASRAVNQAIGRVIRHRNDYGAIILCDERFNQKDSISQLPKWLKDYVQAYGSF 678
Query: 713 GDVVYTLTRFFREERICGSTNLKLIKTEVS 742
G +L FF ST + L++ V+
Sbjct: 679 GLTQKSLKDFF-------STAMTLVRLHVN 701
>gi|301111400|ref|XP_002904779.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095109|gb|EEY53161.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1058
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 327/744 (43%), Positives = 459/744 (61%), Gaps = 45/744 (6%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M +I GI VEFPF YD QL+YMEKV+ +L +K NA+LESPTGTGKTLCLLCATLAWR
Sbjct: 1 MVKLEICGIPVEFPFPPYDSQLIYMEKVLLALTSKQNAILESPTGTGKTLCLLCATLAWR 60
Query: 61 ----KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT 116
K LG+ + ++ + + +S +LP I+Y+SRTHSQL+QV+QELK
Sbjct: 61 RELQKKLGTNTLAPAKRPGPSLAYEGYGSDGESDAPQLPRIIYSSRTHSQLKQVVQELKN 120
Query: 117 SNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP 176
++YRP + +LGSRE LC++ +VS LRG+ QN ACR CK +RRC H Y K +
Sbjct: 121 TSYRPNVAVLGSREHLCVNEKVSKLRGTRQNLACRSTCK---DRRCMHKLGFDSYAKRSK 177
Query: 177 HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
+DIE+LV + CP+F+TR + +IVF PYNYLIDP R+ +G+ +NS
Sbjct: 178 KQAQPIMDIEELVTTMKEKIICPFFLTRNMLPEAEIVFVPYNYLIDPMARRSIGISIENS 237
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ-SSDETLNPDNFA 295
ILIFDEAHN+E I ++AAS+ LSS ++ CISE I ST Q ++ L ++ A
Sbjct: 238 ILIFDEAHNVESIASEAASYALSSNDISGCISEVDTFIRGLSTNSIQLNAGSNLTLEDSA 297
Query: 296 ILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELL 355
+ R L +++ R PG YI+E N+ ET ++ ++E E++
Sbjct: 298 VSRCLRMEVLPRY--------------PGQYIFEFFEQFNVNFETCPLVLSMIE---EII 340
Query: 356 QEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY--YRVHV---READANAADVL-- 408
+ + A +++++ + L IFR K A YRVH+ RE +N+ +
Sbjct: 341 EVAHGGDDSQRAASKLDTMLSFLGTIFRSKEQHLQAAKNYRVHIQEIRERPSNSGRLFNS 400
Query: 409 ----KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE 464
K +R ++WCF+PG+A +E V ++ILTSGTLSP+D+ +EL ++FP+R+E
Sbjct: 401 GRKNKTTTTRVFNYWCFHPGVAFREICTNNVHNVILTSGTLSPLDTTVKELGIDFPVRLE 460
Query: 465 NPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
N HV+ + Q+W G+V G +G LNSSY R + Y ELGNTIVN R+VP GLL+FFP
Sbjct: 461 NNHVVDADQVWVGVVGTGVTGKKLNSSYNFRSTETYLLELGNTIVNFTRLVPHGLLVFFP 520
Query: 525 SYYLMDQCIACWKNTSHG-NLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST 583
SY ++++ I W+ + G + +IW+RI + K+ VEPR + F +++Y + D +
Sbjct: 521 SYSILEESIDKWQRPATGQSALSIWDRIVQQKQTFVEPRGRADFKAVVDEYHQAIAD-NP 579
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GAVFFAVCRGKVSEG+DF++ GRAV+ITG+PF DPK+ LK+ LD +A GE
Sbjct: 580 KGAVFFAVCRGKVSEGIDFSNDKGRAVIITGLPFPPTKDPKIMLKKSILD-EAVVSPGEL 638
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
K L+G WY QQASRAVNQA+GRVIRHRHDYGAII DERFA ++ +S W+Q
Sbjct: 639 K------LTGNAWYIQQASRAVNQAIGRVIRHRHDYGAIILLDERFALKQQQECLSKWLQ 692
Query: 704 PHIQCYSKFGDVVYTLTRFFREER 727
P+ +G+ LTRFF+ +
Sbjct: 693 PYCHTCRGYGEAHIGLTRFFKTNK 716
>gi|89887299|gb|ABD78309.1| regulator of telomere length splice variant isoform 4 [Bos taurus]
Length = 1121
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/768 (41%), Positives = 453/768 (58%), Gaps = 64/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP ++G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKITLKGVTVDFPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L + ++ + SG S N+ GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRD-AVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRP++ +LGSREQLCIH EV + N+ LC++ R H
Sbjct: 120 QVISELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQVHLCRRKVASRSCHFYNN 176
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 VEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 236
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSS-------GLLTACISEAKNCIDISSTRR 281
G++ K +++IFDEAHN+E +C +AASFDL+ ++ + E +
Sbjct: 237 HGIDLKGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRVLEERTKVAQQAELHP 296
Query: 282 GQSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
S+D L P++ A L+ +LL+LE I V + G TKPG YI+EL A+ I
Sbjct: 297 EFSADSARSGLNLEPEDLAKLKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQI 356
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------DKGTA-- 388
T +T ++D ++ +L+Q + T ++ + +I++I+F D G
Sbjct: 357 TFQTKGCILDSLD---QLIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVG 413
Query: 389 -HSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSI 438
S Y+VH+ A +DV A+R LS+WCF+PG +M+E R V ++
Sbjct: 414 LASQSYKVHIHLDAGHRRTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTL 473
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTL+PM SF+ E+++ FP+ +ENPHVI QIW G++P GP G L+S++ R S
Sbjct: 474 ILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSD 533
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
E LG + NI+R+VP GLL+FFPSY +M++ + W+ + R + +KP+
Sbjct: 534 ECLSSLGKVLSNISRVVPHGLLVFFPSYPVMEKSLEFWRARD-------FTRKLEVRKPL 586
Query: 559 -VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
VEPR F +E + A++ +SGA+F AVCRGK SEGLDFAD GR V++TG+P+
Sbjct: 587 FVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPY 646
Query: 618 ATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
DP+V LK ++LD ++AQS G FLSG DWY QQASRAVNQA+GRVIRHR
Sbjct: 647 PPRMDPRVLLKMQFLDEMKAQSGAGG------QFLSGHDWYRQQASRAVNQAIGRVIRHR 700
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
HDYGA+ CD RFAH ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 701 HDYGAVFLCDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
>gi|229891626|sp|A4K436.1|RTEL1_BOVIN RecName: Full=Regulator of telomere elongation helicase 1
gi|89887297|gb|ABD78308.1| regulator of telomere length splice variant isoform 3 [Bos taurus]
Length = 1216
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/768 (41%), Positives = 453/768 (58%), Gaps = 64/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP ++G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKITLKGVTVDFPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L + ++ + SG S N+ GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRD-AVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRP++ +LGSREQLCIH EV + N+ LC++ R H
Sbjct: 120 QVISELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQVHLCRRKVASRSCHFYNN 176
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 VEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 236
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSS-------GLLTACISEAKNCIDISSTRR 281
G++ K +++IFDEAHN+E +C +AASFDL+ ++ + E +
Sbjct: 237 HGIDLKGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRVLEERTKVAQQAELHP 296
Query: 282 GQSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
S+D L P++ A L+ +LL+LE I V + G TKPG YI+EL A+ I
Sbjct: 297 EFSADSARSGLNLEPEDLAKLKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQI 356
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------DKGTA-- 388
T +T ++D ++ +L+Q + T ++ + +I++I+F D G
Sbjct: 357 TFQTKGCILDSLD---QLIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVG 413
Query: 389 -HSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSI 438
S Y+VH+ A +DV A+R LS+WCF+PG +M+E R V ++
Sbjct: 414 LASQSYKVHIHLDAGHRRTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTL 473
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTL+PM SF+ E+++ FP+ +ENPHVI QIW G++P GP G L+S++ R S
Sbjct: 474 ILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSD 533
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
E LG + NI+R+VP GLL+FFPSY +M++ + W+ + R + +KP+
Sbjct: 534 ECLSSLGKVLSNISRVVPHGLLVFFPSYPVMEKSLEFWRARD-------FTRKLEVRKPL 586
Query: 559 -VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
VEPR F +E + A++ +SGA+F AVCRGK SEGLDFAD GR V++TG+P+
Sbjct: 587 FVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPY 646
Query: 618 ATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
DP+V LK ++LD ++AQS G FLSG DWY QQASRAVNQA+GRVIRHR
Sbjct: 647 PPRMDPRVLLKMQFLDEMKAQSGAGG------QFLSGHDWYRQQASRAVNQAIGRVIRHR 700
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
HDYGA+ CD RFAH ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 701 HDYGAVFLCDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
>gi|89887293|gb|ABD78306.1| regulator of telomere length splice variant isoform 1 [Bos taurus]
Length = 1082
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/768 (41%), Positives = 453/768 (58%), Gaps = 64/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP ++G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKITLKGVTVDFPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L + ++ + SG S N+ GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRD-AVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRP++ +LGSREQLCIH EV + N+ LC++ R H
Sbjct: 120 QVISELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQVHLCRRKVASRSCHFYNN 176
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 VEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 236
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSS-------GLLTACISEAKNCIDISSTRR 281
G++ K +++IFDEAHN+E +C +AASFDL+ ++ + E +
Sbjct: 237 HGIDLKGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRVLEERTKVAQQAELHP 296
Query: 282 GQSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
S+D L P++ A L+ +LL+LE I V + G TKPG YI+EL A+ I
Sbjct: 297 EFSADSARSGLNLEPEDLAKLKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQI 356
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------DKGTA-- 388
T +T ++D ++ +L+Q + T ++ + +I++I+F D G
Sbjct: 357 TFQTKGCILDSLD---QLIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVG 413
Query: 389 -HSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSI 438
S Y+VH+ A +DV A+R LS+WCF+PG +M+E R V ++
Sbjct: 414 LASQSYKVHIHLDAGHRRTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTL 473
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTL+PM SF+ E+++ FP+ +ENPHVI QIW G++P GP G L+S++ R S
Sbjct: 474 ILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSD 533
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
E LG + NI+R+VP GLL+FFPSY +M++ + W+ + R + +KP+
Sbjct: 534 ECLSSLGKVLSNISRVVPHGLLVFFPSYPVMEKSLEFWRARD-------FTRKLEVRKPL 586
Query: 559 -VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
VEPR F +E + A++ +SGA+F AVCRGK SEGLDFAD GR V++TG+P+
Sbjct: 587 FVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPY 646
Query: 618 ATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
DP+V LK ++LD ++AQS G FLSG DWY QQASRAVNQA+GRVIRHR
Sbjct: 647 PPRMDPRVLLKMQFLDEMKAQSGAGG------QFLSGHDWYRQQASRAVNQAIGRVIRHR 700
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
HDYGA+ CD RFAH ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 701 HDYGAVFLCDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
>gi|148225626|ref|NP_001091044.1| regulator of telomere elongation helicase 1 [Bos taurus]
gi|84105070|gb|ABC54575.1| regulator of telomere length helicase 1 [Bos taurus]
gi|84105072|gb|ABC54576.1| regulator of telomere length helicase 1 [Bos taurus]
Length = 1266
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/768 (41%), Positives = 453/768 (58%), Gaps = 64/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP ++G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKITLKGVTVDFPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L + ++ + SG S N+ GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRD-AVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRP++ +LGSREQLCIH EV + N+ LC++ R H
Sbjct: 120 QVISELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQVHLCRRKVASRSCHFYNN 176
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 VEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 236
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSS-------GLLTACISEAKNCIDISSTRR 281
G++ K +++IFDEAHN+E +C +AASFDL+ ++ + E +
Sbjct: 237 HGIDLKGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRVLEERTKVAQQAELHP 296
Query: 282 GQSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
S+D L P++ A L+ +LL+LE I V + G TKPG YI+EL A+ I
Sbjct: 297 EFSADSARSGLNLEPEDLAKLKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQI 356
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------DKGTA-- 388
T +T ++D ++ +L+Q + T ++ + +I++I+F D G
Sbjct: 357 TFQTKGCILDSLD---QLIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVG 413
Query: 389 -HSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSI 438
S Y+VH+ A +DV A+R LS+WCF+PG +M+E R V ++
Sbjct: 414 LASQSYKVHIHLDAGHRRTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTL 473
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTL+PM SF+ E+++ FP+ +ENPHVI QIW G++P GP G L+S++ R S
Sbjct: 474 ILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSD 533
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
E LG + NI+R+VP GLL+FFPSY +M++ + W+ + R + +KP+
Sbjct: 534 ECLSSLGKVLSNISRVVPHGLLVFFPSYPVMEKSLEFWRARD-------FTRKLEVRKPL 586
Query: 559 -VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
VEPR F +E + A++ +SGA+F AVCRGK SEGLDFAD GR V++TG+P+
Sbjct: 587 FVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPY 646
Query: 618 ATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
DP+V LK ++LD ++AQS G FLSG DWY QQASRAVNQA+GRVIRHR
Sbjct: 647 PPRMDPRVLLKMQFLDEMKAQSGAGG------QFLSGHDWYRQQASRAVNQAIGRVIRHR 700
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
HDYGA+ CD RFAH ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 701 HDYGAVFLCDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
>gi|89887295|gb|ABD78307.1| regulator of telomere length splice variant isoform 2 [Bos taurus]
Length = 1237
Score = 587 bits (1513), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/768 (41%), Positives = 453/768 (58%), Gaps = 64/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP ++G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKITLKGVTVDFPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L + ++ + SG S N+ GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRD-AVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRP++ +LGSREQLCIH EV + N+ LC++ R H
Sbjct: 120 QVISELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQVHLCRRKVASRSCHFYNN 176
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 VEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 236
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSS-------GLLTACISEAKNCIDISSTRR 281
G++ K +++IFDEAHN+E +C +AASFDL+ ++ + E +
Sbjct: 237 HGIDLKGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRVLEERTKVAQQAELHP 296
Query: 282 GQSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
S+D L P++ A L+ +LL+LE I V + G TKPG YI+EL A+ I
Sbjct: 297 EFSADSARSGLNLEPEDLAKLKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQI 356
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------DKGTA-- 388
T +T ++D ++ +L+Q + T ++ + +I++I+F D G
Sbjct: 357 TFQTKGCILDSLD---QLIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVG 413
Query: 389 -HSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSI 438
S Y+VH+ A +DV A+R LS+WCF+PG +M+E R V ++
Sbjct: 414 LASQSYKVHIHLDAGHRRTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTL 473
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTL+PM SF+ E+++ FP+ +ENPHVI QIW G++P GP G L+S++ R S
Sbjct: 474 ILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSD 533
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
E LG + NI+R+VP GLL+FFPSY +M++ + W+ + R + +KP+
Sbjct: 534 ECLSSLGKVLSNISRVVPHGLLVFFPSYPVMEKSLEFWRARD-------FTRKLEVRKPL 586
Query: 559 -VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
VEPR F +E + A++ +SGA+F AVCRGK SEGLDFAD GR V++TG+P+
Sbjct: 587 FVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVCRGKASEGLDFADVNGRGVIVTGLPY 646
Query: 618 ATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
DP+V LK ++LD ++AQS G FLSG DWY QQASRAVNQA+GRVIRHR
Sbjct: 647 PPRMDPRVLLKMQFLDEMKAQSGAGG------QFLSGHDWYRQQASRAVNQAIGRVIRHR 700
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
HDYGA+ CD RFAH ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 701 HDYGAVFLCDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
>gi|440797062|gb|ELR18157.1| DNA repair helicase (rad3) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1026
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 319/755 (42%), Positives = 451/755 (59%), Gaps = 90/755 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M Y IRG+ V FPF AYD TGKTLCLLCA+LAWR
Sbjct: 51 MQVYDIRGVPVGFPFNAYD-------------------------STGKTLCLLCASLAWR 85
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQS------GDSKL------PTILYTSRTHSQLR 108
+ + +Q + S QS GD L P I+YTSRTHSQL
Sbjct: 86 QQWLHSQSNSAQSAADFAAEWRSKEKPQSLLFSGGGDMPLVVREKPPRIIYTSRTHSQLT 145
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QV++ELK + Y P+M +LGSR QLC++ +V + +++ CR L T+RRC++++R+
Sbjct: 146 QVMKELKRTAYSPRMTVLGSRRQLCVNPDV--VNTPGRDHKCRSLV---TSRRCDYYNRL 200
Query: 169 ADYMKN-------NPHLGDEP-----IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAP 216
D K+ N G+E DIE+L+ GR G C +++ RELQ + DI+FAP
Sbjct: 201 DDLKKSEQLRGSCNGMFGEEVAEGEITDIEELLQSGRDRGLCAFYLARELQYSADIIFAP 260
Query: 217 YNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI 276
YNYLIDP R+ LGV+ + +++IFDEAHN+E +C D+ASFDL + I E + ++
Sbjct: 261 YNYLIDPAIRRSLGVDLRGAVIIFDEAHNVESVCEDSASFDLRVADMKVAIKELERAAEL 320
Query: 277 SSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
+++ S ET N D+ + ++ L I +V ++ GFT+PG YIYELL ++I
Sbjct: 321 AAS--PSYSGET-NKDDITRFKGMVWALINDINKVHVSGD--GFTRPGDYIYELLNQVDI 375
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRD---KGTAHSAYY 393
+T+ L ++ + ++ +E + K + ++S+++ LK +F+D + S YY
Sbjct: 376 NADTSVALTNLCDSPSD--EESGMGLKPLS----LKSLNDCLKTLFKDGVDRREDFSLYY 429
Query: 394 RVHVRE----ADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMD 449
++HV + A A A R +S WCFNPG+AM E + V +IILTSGTLSP+
Sbjct: 430 KIHVHDQASAAQRGAYRFQSRNAERVVSCWCFNPGLAMLELAAQGVRNIILTSGTLSPLA 489
Query: 450 SFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIV 509
S A ELK+ FP+R+EN HVI Q+W G++ GPS Y LNSS++ R++ +YKQ LGN ++
Sbjct: 490 STAAELKIPFPIRLENSHVIQPSQVWVGVLSNGPSDYPLNSSFKTRETEDYKQALGNALI 549
Query: 510 NIARIVPDGLLIFFPSYYLMDQCIACWKNTS-HGNLTTIWERICKHKKPVVEPRQSSLFP 568
N RIVP+GLL+FFPSY + C+ WK +IWER+C++K+ ++EPR++ F
Sbjct: 550 NFMRIVPNGLLVFFPSYTALTTCVDAWKRPDEQARNGSIWERMCRYKQAIIEPREAFQFK 609
Query: 569 LAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
LA+EDY AK+K + GAVFFAVCRGKVSEGLDF+D GRAVVITG+PF ++TD KV+ K
Sbjct: 610 LAMEDYYAKVK--TEGGAVFFAVCRGKVSEGLDFSDDNGRAVVITGLPFPSLTDAKVKQK 667
Query: 629 REYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
R YLD Q Q G + QA RAVNQAVGRVIRH D+GAII D+R
Sbjct: 668 RSYLDHQRQILGTS---------------SLQAMRAVNQAVGRVIRHSRDHGAIILADQR 712
Query: 689 FAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
F + +S +SLW++P ++ Y++FG LTRFF
Sbjct: 713 FGMATNQSGLSLWLRPQVKVYNQFGVAALALTRFF 747
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 19/139 (13%)
Query: 890 SSQPSSFIPITNKVKHEKPQISDSGSRIIAQGSAPSKVDGTTYRIEAEIQSEKSKGSHSS 949
+ Q +S +P VK E+ + + R AP D T+ I+ E+ + + +
Sbjct: 810 APQATSLVPPRAGVKRER--VEEPTER-----PAPHARDATS-----PIKRERGEEAAVT 857
Query: 950 APPCGGEETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAKLFAGPER 1009
A ++ A++ +V+ LS EYK F ++ + K ++++ +++ + +LF+G +R
Sbjct: 858 A-------SEAQAYIRRVKGCLSPDEYKTFQSTLRDFRGKQIELAELMERVQQLFSGSQR 910
Query: 1010 LPLLRRFKDYVPAKYHPLY 1028
PLLR F +VP ++ Y
Sbjct: 911 YPLLRDFVAFVPPRHRATY 929
>gi|395829361|ref|XP_003787828.1| PREDICTED: regulator of telomere elongation helicase 1 [Otolemur
garnettii]
Length = 1303
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/772 (41%), Positives = 455/772 (58%), Gaps = 70/772 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF Y CQ YM KV++ LQ + N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIILNGVTVDFPFRPYRCQQEYMTKVLECLQKRVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGD------SKLPTILYTSRTHSQL 107
+ L S ++ ++ G S N++ +G + +P I+Y SRTHSQL
Sbjct: 61 EHLRD-SVSARKIAERVQGELFLDRALSSWGNAAIAGGDPIVCYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 120 TQVISELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYN 176
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 NVEEKSLEQELATPILDIEDLVKSGSKHRVCPYYLSRSLKQQADIIFMPYNYLLDAKSRR 236
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--LTACISEAKNCIDISSTR 280
V+ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E R
Sbjct: 237 AHNVDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQAMVAQQGELR 296
Query: 281 RGQSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
S+D + + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+
Sbjct: 297 LEFSADSSSSGLNMELEDIAKLKTILLRLEGAIDAVELPGDDSGITKPGSYIFELFAEAQ 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK---------- 385
IT +T ++D ++ +++Q + + T ++ +++I++I+F
Sbjct: 357 ITFQTKGCILDSLD---QIIQHLAGRTRVFTNTAGLQKLADIIQIVFSADMSEVGPSSAV 413
Query: 386 --GTAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLE 434
GT S Y+VH+ + A +D A R LS+WCF+PG +M+E R
Sbjct: 414 GLGTLQS--YKVHIHPDTGCQRTAPRSDSWGTTAPRKPGKVLSYWCFSPGHSMRELVRQG 471
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G++P GP G L+S++
Sbjct: 472 VHSLILTSGTLAPVSSFALEMQIPFPICLENPHIIEQHQIWVGVIPKGPDGAQLSSAFDK 531
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S E LG T+ NIAR+VP GLL+FFPSY +M++ +A W+ T R +
Sbjct: 532 RFSEECLSSLGKTLGNIARVVPHGLLVFFPSYPVMEKSLAFWR-------TRDLARKVEA 584
Query: 555 KKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
KP+ VEPR F I+ Y ++ +SGA F AVCRGK SEGLDF+D GR V+IT
Sbjct: 585 LKPLFVEPRSKGSFSEVIDAYYKQVASPGSSGATFLAVCRGKASEGLDFSDMNGRGVIIT 644
Query: 614 GMPFATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
G+P+ DP+V LK ++LD +Q QSQ G + FLSG++WY QQASRAVNQA+GRV
Sbjct: 645 GLPYPPRMDPRVVLKMQFLDEIQGQSQAG------VQFLSGQEWYRQQASRAVNQAIGRV 698
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IRHRHDYGA+ CD RFA+ ++Q+ W++PH++ Y FG ++ + +FFR
Sbjct: 699 IRHRHDYGAVFLCDHRFAYADARAQLPSWVRPHVKVYDSFGPMIRDVAQFFR 750
>gi|410953370|ref|XP_003983344.1| PREDICTED: regulator of telomere elongation helicase 1 [Felis
catus]
Length = 1477
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/772 (40%), Positives = 453/772 (58%), Gaps = 72/772 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIALNGVTVDFPFQPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLGSFSTLGSQ-----------VNNQIS-GSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
+ L T+ ++ V++ +S G+ +S S + S +P I+Y SRTHSQL
Sbjct: 61 EHL--RDTISARKIAERAQGVLFVDHTLSWGAAASDGDSTACYSDVPKIIYASRTHSQLT 118
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL++++YRP++ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 119 QVISELRSTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYNN 175
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 176 VEEKSLEQELTTSILDIEDLVKSGNKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 235
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL---------LTACISEAKNCI 274
++ K +++IFDEAHN+E +C ++ASFDL+ SGL T + + +
Sbjct: 236 HSIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDVASGLDAIDQVLEEQTKVAQQGEFHL 295
Query: 275 DISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
D S+ +S + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+
Sbjct: 296 DFSAD--SVASGLRMELEDLAKLKVILLRLEGAIDAVELPGNQSGVTKPGSYIFELFAEA 353
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK--------- 385
IT +T ++D ++ +++Q + T ++ +S+I++I+F
Sbjct: 354 QITFQTKGCILDSLD---QIIQHLAGRTGPFTNTAGLQKLSDIIQIVFSADPAEGVSSSV 410
Query: 386 -GTAHSAYYRVHV----------READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE 434
G S Y+VH+ R +DA A + K + LS+WCF+PG +M+E R
Sbjct: 411 MGPGVSQSYKVHIHPDASHQRTARRSDAWNATAAR-KQGKVLSYWCFSPGHSMRELVRQG 469
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V ++ILTSGTL+P+ SFA EL++ FP+ +ENPHVI QIW GIVP GP G L+S++
Sbjct: 470 VRTLILTSGTLAPVSSFALELQIPFPVCLENPHVIDKHQIWVGIVPKGPDGAQLSSAFDK 529
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S LG + NIAR+VP GLL+FFPSY +M++ + W+ + R +
Sbjct: 530 RFSDACLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRARD-------FARKLES 582
Query: 555 KKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
KP+ VEPR F ++ Y ++ +SGA F AVCRGK SEGLDFAD GR V++T
Sbjct: 583 LKPLFVEPRSKGGFSEVVDAYYTRVASPGSSGATFLAVCRGKASEGLDFADTNGRGVIVT 642
Query: 614 GMPFATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
G+P+ DP+V LK ++LD L+ +S G LSG +WY QQASRAVNQA+GRV
Sbjct: 643 GLPYPPRMDPRVVLKMQFLDELKGRSGPGG------QLLSGHEWYRQQASRAVNQAIGRV 696
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IRHRHDYGAI CD RF H ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 697 IRHRHDYGAIFLCDHRFTHADARAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 748
>gi|395506651|ref|XP_003757644.1| PREDICTED: regulator of telomere elongation helicase 1 [Sarcophilus
harrisii]
Length = 1361
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 320/773 (41%), Positives = 460/773 (59%), Gaps = 72/773 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKITLNGVTVDFPFQPYKCQEDYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQ--------SSVNSSQSGDS-----KLPTILYTSRTHSQL 107
+ T ++ ++ G + S N++ GD+ +P I+Y SRTHSQL
Sbjct: 61 EHFKDTIT-ARKIAERMQGVELFPDRPMSSWGNAATDGDTTAYYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHS 166
QVI EL+++ YRPK+ +LGSREQLCI+ EV + + Q + CR KK + C+ ++
Sbjct: 120 SQVISELRSTTYRPKVCVLGSREQLCINPEVRKIESNHIQIHVCR---KKVSTHSCHFYN 176
Query: 167 RVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V + L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R
Sbjct: 177 NVEE-KSTEKELVTPILDIEDLVKGGNRHKVCPYYLSRTLKQQADIIFMPYNYLLDSKTR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--LTACISEA-----KNCI 274
+ ++ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E +N I
Sbjct: 236 RAHNIDLKGTVVIFDEAHNVEKVCEESASFDLTPFDLASGLDAINQVLEEQTKLLQQNEI 295
Query: 275 DISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
+S + ++ A ++ +LLKLE I + + G TKPG YI++L A+
Sbjct: 296 HAEFNMELDNSGLNMELEDIAKVKIILLKLENVIDAIELPGNNTGITKPGSYIFDLFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIF---RDKGTAH-- 389
+IT +T L++ +E +++Q + ++ + +I++I+F R +G A+
Sbjct: 356 HITFQTKSSLLESLE---QIIQFLAGRTGIFNNTAGLQKLVDIIQIVFSIDRPEGVANPI 412
Query: 390 -----SAYYRVHV----------READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE 434
S YY+VH+ + D +A V K K + LS+WCF+PG +MQE + E
Sbjct: 413 MGHTVSKYYKVHIHLDTSNRKKTQRTDVWSAPVAK-KQGKILSYWCFSPGFSMQELIQQE 471
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V +IILTSGTL+P+ SF E+++ FP+ +ENPHVI QIW GIVP GP G L+S+Y
Sbjct: 472 VRTIILTSGTLAPISSFTMEMQIPFPVCLENPHVIDKHQIWVGIVPKGPDGVFLSSAYDK 531
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S E LG TI NIAR+VP GLLIFFPSY +M++ + W++ + R +
Sbjct: 532 RFSEECLSSLGKTIGNIARVVPHGLLIFFPSYPVMEKSLEYWRDHD-------FARKIEE 584
Query: 555 KKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
KPV VEPR F I+ Y K+ ++GA F AVCRGK SEGLDFAD GR V+IT
Sbjct: 585 LKPVFVEPRSKGGFTEVIDAYYEKIICPKSNGAAFMAVCRGKASEGLDFADMNGRGVIIT 644
Query: 614 GMPFATMTDPKVRLKREYLD-LQAQS-QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
G+PF DP+V LK ++LD ++ +S GG+Y LSG +WY QQASRAVNQA+GR
Sbjct: 645 GLPFPPRMDPRVILKMQFLDEMRGKSGTGGQY-------LSGHEWYRQQASRAVNQAIGR 697
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
VIRHR D+GAI CD RF + ++Q+ W++P+++ Y FG ++ +FFR
Sbjct: 698 VIRHRQDFGAIFLCDHRFTNNDARAQLPSWVRPYVKVYDNFGHIIRDAAQFFR 750
>gi|351714866|gb|EHB17785.1| Regulator of telomere elongation helicase 1, partial
[Heterocephalus glaber]
Length = 1184
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 312/763 (40%), Positives = 448/763 (58%), Gaps = 58/763 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYQCQQEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQISGSQ--SSVNSSQSGDSK-------LPTILYTSRTHSQLR 108
+ L S + + ++ Q S+ S+ + D + +P I+Y SRTHSQL
Sbjct: 61 EHLWDTVSARKIAERAQGELFLDQALSAWGSATAADGEPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ + YRP++ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTAYRPRVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D RK
Sbjct: 178 VEEKSLEQELVTPILDIEDLVKNGSKHKVCPYYLSRNLKQQADIIFMPYNYLLDAKSRKA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--LTACISEAKNCIDISSTRR 281
++ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E + S +
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDVASGLDAIGQVLEEQTRVVQQSELQL 297
Query: 282 GQSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
G S D T + ++ A L+ +LL+LE I V + G TKPG YI+ L A+ I
Sbjct: 298 GLSLDPTSSGLNMQLEDIAKLKMILLRLEGAIDAVQLPGDGSGVTKPGSYIFNLFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSA----Y 392
T ++ + I+E +++Q + T ++ + +I++I+F T S
Sbjct: 358 TFQSK---VCILESLDQIIQHLAGRAGVFTNTAGLQKLMDIIQIVFSVDPTEGSPGISQS 414
Query: 393 YRVHV----------READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTS 442
Y+VH+ + +DA +A + K + LS+WCF+PG +MQE R V ++ILTS
Sbjct: 415 YKVHIHPDIGPRRAAQRSDAWSAATSR-KQGKVLSYWCFSPGHSMQELLRQGVRTVILTS 473
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
GTL+P+ SF E+++ FP+ +ENPHVI Q+W G++P GP G L+S++ R S E
Sbjct: 474 GTLAPLSSFVLEMQIPFPVCLENPHVIDKHQLWVGVIPRGPDGAELSSAFDKRFSEECLS 533
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
LG T+ NIAR+VP GLL+FFPSY +M+ +A W+ + + + VEPR
Sbjct: 534 SLGKTLGNIARVVPHGLLVFFPSYPVMENSLAFWRARDLARKVEVLKPL------FVEPR 587
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
F I+ Y ++ +SGA F AVCRGK SEGLDF+D GR V+ITG+P+ D
Sbjct: 588 SKGSFSEVIDAYYQRVASPGSSGATFLAVCRGKASEGLDFSDINGRGVIITGLPYPPRMD 647
Query: 623 PKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
P+V LK ++LD ++ QSQ G FLSG++WY QQASRAVNQA+GRVIRHRHDYGA
Sbjct: 648 PRVVLKMQFLDEMRGQSQAGG------QFLSGQEWYRQQASRAVNQAIGRVIRHRHDYGA 701
Query: 682 IIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
I CD RF + K+Q+ W++P+++ Y+ FG V+ + +FFR
Sbjct: 702 IFLCDHRFTYADAKAQLPSWVRPYLKVYNNFGHVIRDVAQFFR 744
>gi|357622566|gb|EHJ73993.1| fanconi anemia group J protein [Danaus plexippus]
Length = 950
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/762 (41%), Positives = 454/762 (59%), Gaps = 63/762 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
M I GI V FPFE Y+ Q YMEKVI+SLQN NA+LESPTGTGKTL LLC++LAW
Sbjct: 1 MSEIMIYGIPVTFPFEPYEVQKSYMEKVIESLQNNTNAVLESPTGTGKTLSLLCSSLAWL 60
Query: 60 ---------RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDS-KLPTILYTSRTHSQLRQ 109
LG+FS N +S+ S+ S +P I+Y+SRTHSQL Q
Sbjct: 61 LVKKAQLQMNAQLGNFSEHSGYSNALRDNLKSNAGKSKDNTSWGMPKIIYSSRTHSQLTQ 120
Query: 110 VIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
+QELK S+YR K +LGSR+Q+CIH EVS + + N K +R C+ ++ V
Sbjct: 121 AMQELKRSSYRHVKAAVLGSRDQMCIHPEVS--KETNNMNKVHMCQLKVKSRTCHFYNNV 178
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ GD+ +DIEDLV++G+ CPY++++EL++ DI+F PYNYL+DP R+
Sbjct: 179 ESKKDDRSVKGDDILDIEDLVSVGKKLKCCPYYLSKELKQDADIIFMPYNYLLDPKSRRA 238
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDET 288
GVE N+I+I DEAHN+E +C ++AS + + + CI E + S G+ D T
Sbjct: 239 NGVELMNNIIILDEAHNVEKMCEESASLQIRTTDVALCIDEITYIM--KSFADGEDLDVT 296
Query: 289 LNP--------DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQET 340
L+P D+ L+ ++L EK + E+ + S+ G T PG YI+ELL+ IT
Sbjct: 297 LDPNQPKDFTCDDLCTLKEMMLAFEKAVDEIQVGSE--GSTFPGGYIFELLSKAEITDRN 354
Query: 341 AYKLIDIVEVAAELLQEDKLQNKKSTTACR----IESISNILKIIFRDKGTAHSAY---- 392
+I ++E L+Q L S+ R ++ I ++L ++F A+
Sbjct: 355 QMSVIGLIE---NLIQ--YLSTASSSPFTRKGVGLQKIVDLLNVVFSGTTVAYKERVKLC 409
Query: 393 YRVHVREAD------ANAADVLKGK----ASRTLSWWCFNPGIAMQEFSRLEVGSIILTS 442
Y+VHV+ D ++ LK A R LS+WCF+PG M++ V SIILTS
Sbjct: 410 YKVHVQVEDKKNNKKTDSWGALKASNTKSAERVLSYWCFSPGFGMKQLLEQNVRSIILTS 469
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
GTL+P+ EL + +++ENPH++ S QI I+ GP LNS+Y+NR++ +Y
Sbjct: 470 GTLAPLKPLISELGIPIGVQLENPHIVKSNQIHVKIIGQGPDSETLNSNYQNRNNPKYIS 529
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
LG TI++ +R++PDGLL+FFPSY +M +C W+ + G IW I K VEP+
Sbjct: 530 SLGRTILSFSRVIPDGLLVFFPSYPIMTKCQEMWQ--AEG----IWSSINSIKPIFVEPQ 583
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
+ F I DY +K++D ++ GA F AVCRGKVSEGLDFAD GRAV+ITG+PF + D
Sbjct: 584 RKDTFNSIINDYYSKIRDPNSRGACFMAVCRGKVSEGLDFADMNGRAVIITGLPFPPLKD 643
Query: 623 PKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
P++ LK++YL+ E + + +LSG++WY+ +ASRAVNQA+GRVIRH++DYGAI
Sbjct: 644 PRIILKKKYLE--------ELRVNQKEYLSGDEWYSLEASRAVNQAIGRVIRHQNDYGAI 695
Query: 683 IFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+ CD RF +P K+Q+S W++ HI +KFG V + RFF+
Sbjct: 696 LLCDTRFNNPKLKNQLSAWLRDHIVVSNKFGLTVSEICRFFK 737
>gi|428183991|gb|EKX52847.1| hypothetical protein GUITHDRAFT_39398, partial [Guillardia theta
CCMP2712]
Length = 719
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/739 (41%), Positives = 445/739 (60%), Gaps = 37/739 (5%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKC-NALLESPTGTGKTLCLLCATLAWRKSLG 64
+RG+ VEFPF Y Q+ +E +I +L +ALLESPTGTGKTLCLLC L W+ S
Sbjct: 1 VRGVRVEFPFRPYGSQVRLLEALIDALSAPGRHALLESPTGTGKTLCLLCGVLGWKNSSK 60
Query: 65 SFSTLGSQVNNQISGSQSSVNS--SQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK 122
S S + +++ S++ S G S+L +Y SRTH QL QV++EL+ S+Y+P+
Sbjct: 61 VSSQ--SSLPPELASLPPSMHPLPSSPGSSRL---VYMSRTHGQLTQVVRELRASSYKPR 115
Query: 123 MVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP 182
M +LGSR+QLCIH EVS LRGSAQN AC L + C ++ V D+ + +E
Sbjct: 116 MAVLGSRQQLCIHPEVSKLRGSAQNAACSKLVGA---QACGYYRNVMDHKHERKEVVEEL 172
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
+DIEDL G T CPY+++R+L ++VF PYNYL DP RK L WK+SI++ DE
Sbjct: 173 MDIEDLCKHGTTHKVCPYYLSRDLSSDAEVVFMPYNYLTDPASRKSLLHLWKDSIVVIDE 232
Query: 243 AHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLL 302
AHN+E IC+DAASFD+ S + C+SE CI + S + + IL+ +LL
Sbjct: 233 AHNMETICSDAASFDICSSDIAICVSEIDRCIAMRENPMEMSFADPPSVSELEILKHILL 292
Query: 303 KLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN 362
EK++ + + T+ G +I+E+ + A +L ++ A +L E +Q
Sbjct: 293 AFEKQLDTIELLGSPPSATRRGEFIFEVFNSAGVNMTNAPELCLMLGRAVSMLLE--VQG 350
Query: 363 KKSTTACRIESISNILKIIFRDKGTAH-SAYYRVHV-------------READANAADVL 408
TT ++S ++ ++I+F+ + S YRV V R + A+
Sbjct: 351 SAMTTNPALKSFADAVEIVFKPSDLQNVSRLYRVFVSDEPENKKVSKAERNSLASFFPAA 410
Query: 409 KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHV 468
+ + R+L +WCF+ G+ M++ + V +I+L SGTLSPM S++ E+++ F + +EN HV
Sbjct: 411 RARRGRSLGYWCFSAGVTMRDILQQGVRNIVLASGTLSPMSSWSIEMEMKFEVVLENEHV 470
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I+ +QI+A ++ GP G +LNSSYRN+D+ E +LGN IVN RIVPDGLL+FFPSY
Sbjct: 471 ISDEQIFAAVLRRGPRGTVLNSSYRNKDNKEMIHDLGNVIVNTCRIVPDGLLVFFPSYSA 530
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVF 588
+ I W+N IW+RI +HK VEPR+S+ F + Y ++ + GA+
Sbjct: 531 LTNTIQEWQNVG------IWDRIARHKHVFVEPRESANFKATVTAYTEQVDKQGSVGAIL 584
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKL 648
AVCRGK+SEG+DFAD GRAV+ITG+PF + DP+V LKR Y+D A Q + T
Sbjct: 585 MAVCRGKMSEGIDFADRHGRAVIITGLPFPALLDPRVVLKRSYMDEVAGRQPKDSSTT-- 642
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
++GE WY QQA+RAVNQA+GRVIRH+ D+GAI+ CDERFA +R+ +S W+Q I+
Sbjct: 643 --VNGEKWYMQQAARAVNQAIGRVIRHKEDFGAILLCDERFAGWTRQPLLSRWVQGRIEV 700
Query: 709 YSKFGDVVYTLTRFFREER 727
+FG V L FF++ +
Sbjct: 701 KDEFGPVTQQLANFFQKHK 719
>gi|301780626|ref|XP_002925736.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Ailuropoda melanoleuca]
Length = 1303
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/769 (40%), Positives = 450/769 (58%), Gaps = 65/769 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIALNGVTVDFPFQPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S V +S GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDAVSARKIAERAQGELFLDRTLSSWGVGTS-DGDITGCYADIPKIIYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRP++ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 120 QVISELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYNN 176
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 VEEKSLEQELATPILDIEDLVRSGNKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 236
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ----- 283
++ K +I+IFDEAHN+E +C + ASFDL+ L + + ++ + Q
Sbjct: 237 HSIDLKGTIVIFDEAHNVEKMCEETASFDLTPHDLASGLDAIDQVLEEQTKAAQQDELHM 296
Query: 284 -----SSDETLNP--DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
S+D L+ ++ A L+ +LL+LE I V + G TKPG YI+EL A+ I
Sbjct: 297 GFGAGSADSGLHMGLEDTAKLKMMLLRLEGAIDAVELPGDHSGVTKPGSYIFELFAEAQI 356
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK----------G 386
T +T ++D ++ +++Q + T ++ +S+IL+I+F G
Sbjct: 357 TFQTKGCILDSLD---QIIQHLAGRAGLFTNTAGLQKLSDILQIVFSADSAEGAPGSMVG 413
Query: 387 TAHSAYYRVHV----------READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
S +Y+VH+ + +DA + + K + LS+WCF+PG +M+E R V
Sbjct: 414 PGVSQFYKVHIHPDAGHQRKSQRSDAWNSTTAR-KQGKVLSYWCFSPGRSMRELVRQGVH 472
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
+IILTSGTL+P+ SFA E+++ FP+ +ENPHVI +Q+W GIVP GP G L+S++ R
Sbjct: 473 TIILTSGTLAPLASFALEMQIPFPVCLENPHVIDRQQMWVGIVPKGPDGAQLSSAFDKRF 532
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
S LG + NIAR+VP GLL+FFPSY +M++ + W+ + R + K
Sbjct: 533 SDACLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRAHD-------FARKLEALK 585
Query: 557 PV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
PV VEPR F ++ Y + +SGAVF AVCRGK SEGLDFAD GR V++TG+
Sbjct: 586 PVFVEPRSKGGFSEVVDAYYTRAASPGSSGAVFLAVCRGKASEGLDFADMNGRGVIVTGL 645
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ DP+V LK ++LD + + +GG + LSG +WY QQASRAVNQA+GRVIRH
Sbjct: 646 PYPPRMDPRVVLKMQFLD-ELKGRGGPGGQV----LSGHEWYRQQASRAVNQAIGRVIRH 700
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RHDYGAI CD RFAH ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 701 RHDYGAIFLCDHRFAHADARAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 749
>gi|348554129|ref|XP_003462878.1| PREDICTED: regulator of telomere elongation helicase 1-like [Cavia
porcellus]
Length = 1250
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 342/894 (38%), Positives = 505/894 (56%), Gaps = 83/894 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYHCQQEYMSKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQISGSQ--SSVNSSQSGD-------SKLPTILYTSRTHSQLR 108
+ L S + +V ++ +Q SS ++ + D + +P I+Y SRTHSQL
Sbjct: 61 EHLRDTISARKIAERVQGELFLNQDLSSWGNATAADGDSIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ + YRP++ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTAYRPRVCVLGSREQLCIHPEV---KKQESNHVQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ D++F PYNYL+D RK
Sbjct: 178 VEEKSLEQELVTPILDIEDLVKKGSKHKVCPYYLSRNLKQQADLIFMPYNYLLDTKSRKA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDE- 287
++ K +++IFDEAHN+E +C ++ASFDL+ + + + EA + + TR Q S+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDVASGL-EAIDQVLEEQTRMAQQSELQ 296
Query: 288 ---TLNP---------DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
+++P ++ A L+ +LL+LE I V + G TKPG YI+ L A+
Sbjct: 297 LELSMDPTSSGLNMQLEDIAKLKMILLRLEAAIDAVQLPGDGSGVTKPGSYIFNLFAEAQ 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----DKGTAHSA 391
IT ++ I I+E +++Q + T+ ++ + +I++I+F + S
Sbjct: 357 ITFQSK---ICILESLDQIIQHLAGRAGVFTSTAGLQKLMDIIQIVFSLDPAEGSLGISQ 413
Query: 392 YYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSIILT 441
+Y+VH+ R+A A +D ASR LS+WCF+PG +M+E V ++ILT
Sbjct: 414 FYKVHIHPDTGLRKA-AQRSDAWSTTASRKQGKVLSYWCFSPGHSMRELVCQGVRTLILT 472
Query: 442 SGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
SGTL+P+ SFA E+++ FP+ +ENPHVI Q+W G+VP GP G L+S++ R S E
Sbjct: 473 SGTLAPLSSFALEMQIPFPVCLENPHVIEKHQLWVGVVPRGPDGAELSSAFDKRFSEECL 532
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV-VE 560
LG T+ NIAR+VP GLL+FFPSY +M++ + W+ +L E + KP+ VE
Sbjct: 533 SSLGKTLGNIARVVPHGLLVFFPSYPVMEKSLEFWRAR---DLARKLEAL----KPLFVE 585
Query: 561 PRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
PR F I+ Y ++ +SGA F AVCRGK SEGLDF+D GR V+ITG+P+
Sbjct: 586 PRSKVSFSEVIDAYYQRVASPGSSGATFLAVCRGKASEGLDFSDTNGRGVIITGLPYPPR 645
Query: 621 TDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
DP+V LK ++LD ++ Q+Q G FLSG++WY QQASRAVNQA+GRVIRHRHDY
Sbjct: 646 MDPRVVLKMQFLDEMRGQNQPGS------QFLSGQEWYRQQASRAVNQAIGRVIRHRHDY 699
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR-EERICGSTNLKLIK 738
GAI CD RF + K+Q+ W++P+++ Y FG V+ + +FFR ++I + LK +
Sbjct: 700 GAIFLCDHRFTYADAKAQLPSWVRPYLKVYDNFGHVIRDVAQFFRVAQKIMPAPTLKALA 759
Query: 739 TEVSGDVRELK----PVDLLDKISLEEVPSSTPAVDQACYSLHEVKNRNTS---SHSGEI 791
+ V K P LL + P++ L V++ ++ + E
Sbjct: 760 SGVGEGEAAAKVAASPGPLLSTRKATSLDVHVPSLRSKPAGLLAVEDPESALCVEYEQEA 819
Query: 792 VPANRSSLSPYKGIWASE----------LKNSSDLIQFEKKLL---LSGRKSIQ 832
PA R + + SE L +SS +Q+EK+L GRK ++
Sbjct: 820 FPAQRRPVGLLAALEHSEQKAGLSQDLALGHSSLSLQYEKRLADEQRGGRKKVR 873
>gi|443694244|gb|ELT95437.1| hypothetical protein CAPTEDRAFT_179377 [Capitella teleta]
Length = 837
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/781 (40%), Positives = 450/781 (57%), Gaps = 73/781 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
MP + G+ V FPF+ Y CQ+ YM V+ L+ NA+LESPTGTGKTLCLLC++LAW
Sbjct: 1 MPLVEASGVSVNFPFDPYPCQVDYMSSVVSCLKTGQNAILESPTGTGKTLCLLCSSLAWL 60
Query: 60 ---RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKL---------PTILYTSRTHSQL 107
R + S +Q N G S Q KL P I+Y SRTHSQL
Sbjct: 61 ETKRAQITSQRWNIAQANADDGGEGSLNVGKQDLAGKLNEAAVLLAPPKIIYASRTHSQL 120
Query: 108 RQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCK-KGTNRRCNHH 165
QVIQELK S Y K+ +LGSREQ+CIH +V N +C+ K T+R C+ +
Sbjct: 121 TQVIQELKRSAYSHFKVSVLGSREQMCIHPQV---MKEESNTVKVHMCRSKVTSRTCHFY 177
Query: 166 SRV-ADYMKNNPH-LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
+ + ++ + H ++ +DIEDLV G+ CPY++ REL+ DI+F PYNYL+DP
Sbjct: 178 NNMDTEFSADAKHNFTNQLMDIEDLVVQGKKMNCCPYYVARELKNDADIIFLPYNYLLDP 237
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ 283
RK GVE + +I+IFDEAHNLE +C D+ASFD +S + + + E + ++ +
Sbjct: 238 KSRKAHGVELQGNIVIFDEAHNLEKMCEDSASFDFTSTDIASAMREVDS---VAGRLQEL 294
Query: 284 SSDETLNPD---------------NFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIY 328
SDE L+ D + ++ +L+ LE I EVP+ + + G TKPG YI+
Sbjct: 295 CSDEVLSADFGTNSEQGGVDLELQDVLKVKMMLMNLESAIDEVPLPNPKEGITKPGSYIF 354
Query: 329 ELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTA 388
+LLA IT ET +++++++ + L + ++ I ++++KI+F + +
Sbjct: 355 DLLAKTLITFETKTQVLELLDKLVQCLSNEGFSTAFNSRGNAISKFADMIKIVFSKEPAS 414
Query: 389 H-----------SAYYRVHVREADAN---------AADVLKGKASRTLSWWCFNPGIAMQ 428
+ YRVH+R+ + A K RTLS+WCF+P M
Sbjct: 415 DRTNLINHQQMAAQSYRVHIRQTPTDNFKSKSSGWGAAPTSAKTGRTLSYWCFSPSHTML 474
Query: 429 EFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLL 488
+ V SIILTSGTLSP+ SF E+ ++F + +ENPHVI KQ+W G + GP L
Sbjct: 475 DLISRGVKSIILTSGTLSPISSFKSEMGIDFQIELENPHVIDPKQVWVGTLSKGPDNEPL 534
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
S Y R Y++ LGN +VN +RIVP GLL+FFPSY +MDQC+ W++ T+W
Sbjct: 535 CSDYNTRFKESYQKSLGNAVVNFSRIVPHGLLLFFPSYPVMDQCVTNWRS------GTLW 588
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
R+ + K VEPR F + Y K+ D + +GA F AVCRGKVSEGLDFAD GR
Sbjct: 589 SRMDQMKSVYVEPRNKHEFNTTMAAYYDKINDDTCNGATFAAVCRGKVSEGLDFADRNGR 648
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
AVVITG+P+ DPKV LK ++LD + + GG+ L+G++WY QQA+RAVNQA
Sbjct: 649 AVVITGLPYPPRMDPKVMLKMKFLD-ETRRAGGKG-------LTGQEWYGQQATRAVNQA 700
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE-ER 727
+GRVIRH+ D+GAII CD RFA +Q+ W++P Q YS+FG V + FF+E ER
Sbjct: 701 IGRVIRHKDDFGAIILCDRRFADQRAINQLPSWVRPKCQRYSQFGMAVRDMIAFFKEAER 760
Query: 728 I 728
+
Sbjct: 761 M 761
>gi|338719447|ref|XP_001492963.3| PREDICTED: regulator of telomere elongation helicase 1-like [Equus
caballus]
Length = 1344
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 312/771 (40%), Positives = 449/771 (58%), Gaps = 67/771 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKITLNGVTVDFPFQPYKCQEEYMTKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI---SGSQSSVNSSQSGD-------SKLPTILYTSRTHSQL 107
+ L S + ++ ++ S N++ GD + +P I+Y SRTHSQL
Sbjct: 61 EHLHDAISARKIAARAQGELFPDRALSSWGNAASDGDGDNTACYTDIPKIIYASRTHSQL 120
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QVI EL+ ++YRP++ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 TQVISELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYN 177
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 NVEEKSLEQELAAPILDIEDLVKSGNRHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRR 237
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL---------LTACISEAKNC 273
++ K +++IFDEAHN+E +C ++ASFDL+ SGL T +
Sbjct: 238 AHSIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDVASGLDVIDQVLEEQTKVAQQGDLL 297
Query: 274 IDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLAD 333
++ S+ SS + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+
Sbjct: 298 LEFSAD--SSSSGLNMELEDIAKLKMILLRLEGAIDAVELPGDDNGVTKPGSYIFELFAE 355
Query: 334 LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK-------- 385
IT +T ++D ++ +++Q + T ++ +++I++I+F
Sbjct: 356 AQITFQTKGCILDSLD---QIIQHLAGRAGLFTNTAGLQKLADIIQIVFSMDPAEGGPSS 412
Query: 386 --GTAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLE 434
G S Y+VH+ A +D A+R LS+WCF+PG +M+E R
Sbjct: 413 MVGPGVSQSYKVHIHPDTSHRRTAQRSDAWSTSAARKQGKVLSYWCFSPGHSMRELVRQG 472
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPHVI QIW G+VP GP G L+S++
Sbjct: 473 VRTLILTSGTLAPVSSFALEMQIPFPVCLENPHVIDKHQIWVGVVPKGPDGAQLSSAFDK 532
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S LG + NIAR+VP GLL+FFPSY +M++ + W+ + R +
Sbjct: 533 RFSDTCLASLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRAQD-------FARKLEA 585
Query: 555 KKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
KPV VEPR ++ Y + + SGAVF AVCRGKVSEGLDFAD GR V++T
Sbjct: 586 LKPVFVEPRSKGGLSEVMDAYYSTVASPGASGAVFLAVCRGKVSEGLDFADTNGRGVIVT 645
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ DP+V LK ++LD + + QGG + FLSG DWY QQASRAVNQA+GRVI
Sbjct: 646 GLPYPPRMDPRVVLKMQFLD-EMKGQGG----ARGQFLSGRDWYRQQASRAVNQAIGRVI 700
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RHRHDYGA+ CD RF++ ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 701 RHRHDYGAVFLCDHRFSYADARAQLPSWVRPHVKVYDGFGHVIRDVAQFFR 751
>gi|426241833|ref|XP_004014789.1| PREDICTED: regulator of telomere elongation helicase 1 [Ovis aries]
Length = 1305
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 322/805 (40%), Positives = 461/805 (57%), Gaps = 100/805 (12%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP ++G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKITLKGVTVDFPFQPYKCQEEYMSKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L + ++ + SG S N+ GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRD-AVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVS----------LLRGSAQNNACRFL----- 153
QVI EL+ ++YRP++ +LGSREQLCIH EV L R +C F
Sbjct: 120 QVISELRNTSYRPRVCVLGSREQLCIHPEVKKQESNHMQVHLCRRKVAGRSCHFYNNVVY 179
Query: 154 CK---------KGTNRRCNHHSRVADYMKN-----------NPHLGDEPIDIEDLVNIGR 193
C +G + C S +A + + L +DIEDLV G
Sbjct: 180 CGALRPSVSMLQGVDCGCLRGSGLAAFYTSLELRCLSEKSLEQELATPILDIEDLVRSGT 239
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADA 253
CPY+++R L++ DI+F PYNYL+D R+ ++ K +++IFDEAHN+E +C +A
Sbjct: 240 KHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHSIDLKGTVVIFDEAHNVEKMCEEA 299
Query: 254 ASFDLS-----SGL---------LTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
ASFDL+ SGL T +A+ + S+ G S L ++ A L+
Sbjct: 300 ASFDLTPHDVASGLDVIDQVLEEQTKVAQQAELHPEFSADSAG--SGLNLELEDLAKLKM 357
Query: 300 LLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK 359
+LL+LE I V + G TKPG YI+EL A+ IT +T ++D ++ +L+Q
Sbjct: 358 ILLRLEGAIDAVELPGGNSGVTKPGSYIFELFAEAQITFQTKGCILDSLD---QLIQHLA 414
Query: 360 LQNKKSTTACRIESISNILKIIFR-DKGTAH--------SAYYRVHVR-----EADANAA 405
+ T ++ +++I++I+F D S Y+VH+ A +
Sbjct: 415 GRAGLFTNTAGLQKLADIIQIVFSVDSAEGDPVPMVGLASQSYKVHIHLDAGHRRTAQRS 474
Query: 406 DVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
DV A+R LS+WCF+PG +M+E R V ++ILTSGTL+PM SF+ E+++ FP+
Sbjct: 475 DVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPV 534
Query: 462 RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
+ENPHVI+ QIW G++P GP G L+S++ R S E LG + NI+R+VP GLL+
Sbjct: 535 CLENPHVISQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLV 594
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKD 580
FFPSY +M++ + W+ + R + +KP+ VEPR F +E + A++
Sbjct: 595 FFPSYPVMEKSLEFWRAHD-------FTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAA 647
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD-LQAQSQ 639
+SGA+F AVCRGK SEGLDFAD GR V++TG+P+ DP+V LK ++LD ++AQS
Sbjct: 648 PESSGAIFLAVCRGKASEGLDFADMNGRGVIVTGLPYPPRMDPRVLLKMQFLDEMKAQSG 707
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
G FLSG DWY QQASRAVNQA+GRVIRHRHDYGA+ CD RFAH ++Q+
Sbjct: 708 AGG------QFLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLP 761
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFFR 724
W++PH++ Y FG V+ + +FFR
Sbjct: 762 SWVRPHVKVYDSFGHVIRDVAQFFR 786
>gi|363741498|ref|XP_417435.3| PREDICTED: regulator of telomere elongation helicase 1 [Gallus
gallus]
Length = 1220
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 306/750 (40%), Positives = 442/750 (58%), Gaps = 51/750 (6%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP +RG+ V+FPF+ Y+CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPRVTLRGVTVDFPFQPYECQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQ--------SSVNSSQSGD-----SKLPTILYTSRTHSQL 107
+ + ++ +++G + S N++ GD + +P I+Y SRTHSQL
Sbjct: 61 EHFKD-TISARKIAQRMNGVELFPDRPMSSWGNAATDGDIPTYYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QVI ELK + YRPK+ +LGSREQLCI+ EV + N+ ++C+K R H
Sbjct: 120 TQVINELKNTVYRPKICVLGSREQLCINPEV---KRQESNHMQIYMCRKKVMARACHFYN 176
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
+ L D +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 NVEEKSTEKGLMDSIMDIEDLVKNGSKHRACPYYLSRSLKQQADIIFMPYNYLLDAKSRR 236
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS--------EAK----NCID 275
+E K +++I DEAHN+E +C +++SFDL++ L + I +AK N ++
Sbjct: 237 AHNIELKGTVVILDEAHNVERLCEESSSFDLTAYDLASAIDVINLVLEEQAKVVQQNEVN 296
Query: 276 ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
SS + ++ A ++ +LL+LE I V + + G TK G YI+EL A
Sbjct: 297 AEFNMESISSGLNMELEDIAKIKKILLQLESAIDAVELPPNDSGVTKDGSYIFELFAQAQ 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKI-IFRDKGTAHSAYYR 394
IT +T L++ ++ ++LQ + + +S+I+++ I D R
Sbjct: 357 ITFQTKTSLLESLD---QILQFLSGRTGIFINTSGLHKLSDIIQVHIHLDNSNQKKKKER 413
Query: 395 VHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQE 454
+ D++AA K +TLS+WCF+PG +M E R V +IILTSGTLSP+ SF E
Sbjct: 414 TDL--WDSSAAK----KQGKTLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTME 467
Query: 455 LKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
+++ FP+ +ENPHVI +Q+W GI+P GP G +LNS+Y R S +Y LG TI N+ R+
Sbjct: 468 MQIPFPVLLENPHVIDKRQLWVGIIPKGPDGTVLNSAYERRFSEDYLSSLGKTIGNLVRV 527
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
VP GLL+FFPSY +MD+ + W+ +RI + K VEPR F ++ Y
Sbjct: 528 VPHGLLVFFPSYPVMDKSLEYWREHDFA------KRIEEVKPMFVEPRNKGSFAEVMDAY 581
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
+K+ ++GA F AVCRGK SEGLDFAD GR V+ITG+PF +P+V LK ++L+
Sbjct: 582 YSKIACPKSNGAAFLAVCRGKASEGLDFADMNGRGVIITGLPFPPRWEPRVVLKMQFLNE 641
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
+S G LSG WYNQQASRAVNQA+GRVIRHR DYGAI CD+RF +
Sbjct: 642 MKKSNMGA------QCLSGHQWYNQQASRAVNQAIGRVIRHRQDYGAIFLCDDRFTTDNV 695
Query: 695 KSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+ ++ W++P++ Y FG V +++ FFR
Sbjct: 696 RGKLPSWVRPYVNVYDNFGHAVRSVSVFFR 725
>gi|302129716|ref|NP_001013328.2| regulator of telomere elongation helicase 1 [Danio rerio]
Length = 1177
Score = 570 bits (1470), Expect = e-159, Method: Compositional matrix adjust.
Identities = 302/767 (39%), Positives = 452/767 (58%), Gaps = 61/767 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP K++GI+V+FPF Y CQ YM KVI+ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPVIKLKGINVDFPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQ--------SSVNSSQSGDS-----KLPTILYTSRTHSQL 107
+ ++ ++ G++ S ++ GD+ +P I+Y SRTHSQL
Sbjct: 61 DHFKD-TISARKITERMGGAELFADRPMSSWGTAATDGDTPTYYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QV+ ELK ++YRPK+ +LGSREQLCI++EV +R + + K ++R C ++
Sbjct: 120 TQVVNELKNTSYRPKICVLGSREQLCINQEV--MRHESNHIKVHMCRAKVSSRSCIFYNN 177
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
V D + + + +D+EDLV G+ CPY+++R L++ D++F PYNYL+DP R+
Sbjct: 178 V-DEKSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQHADVIFMPYNYLLDPKSRR 236
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI-----DISSTRRG 282
+E K +++IFDEAHN+E +C ++ SFDL+ L + I + DIS
Sbjct: 237 AHNIELKGAVVIFDEAHNVEKMCEESTSFDLTPHDLISAIEAVDRLLREQASDISKADSA 296
Query: 283 QSSD-ETLNPD------NFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
+ + E+LN A ++ +L+ LE I + + + G TKPG +I+EL N
Sbjct: 297 EDFNVESLNSGLKMDITTIAKVKQILMDLETAINDFEMPANNQGITKPGSFIFELFEMAN 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIF--------RDKGT 387
+ +T + ++ +E L + ++ +++I++++F + T
Sbjct: 357 VNSKTKTETVEAMEQITGYLAG---RPGVFLNTSGLQKVADIIQLVFVAEPAEGSKKSQT 413
Query: 388 AHS-AYYRVHVREADAN-----AADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
+S ++VH+ ++N DV +++ LS+WCF+PG +MQE R EV
Sbjct: 414 GNSLKEFKVHIHPDNSNFKKKQITDVWASSSTKKQGNVLSYWCFSPGFSMQELLRQEVRC 473
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
IILTSGTLSP+ SF E+++ FP+ +ENPHVI QI+ I+ GP G L++++ R
Sbjct: 474 IILTSGTLSPLSSFTCEMQIPFPVSLENPHVIQRDQIFVSIIEKGPDGVQLSTAFDRRFV 533
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E +GNT+VN++R+VP GLL+FFPSY +MD+ + W+ H +RI K
Sbjct: 534 PENMSSMGNTLVNLSRVVPHGLLVFFPSYPVMDKTLEFWRAKGHA------DRIENVKPM 587
Query: 558 VVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
VEPR F I+ Y K+ D ++SG FFAVCRGK SEGLDFAD GR VVITG+PF
Sbjct: 588 FVEPRGKGTFTEVIDGYYGKVDDPNSSGGSFFAVCRGKASEGLDFADTYGRGVVITGLPF 647
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
DP+V LK +YLD ++ K + + +L+G++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 PPRMDPRVVLKMQYLDEMCRN-----KISGVKYLTGQEWYRQQASRAVNQAIGRVIRHRE 702
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGAI CD RF ++Q+ W++P+++ Y FG +V + +FFR
Sbjct: 703 DYGAIFLCDHRFKSADARNQLPSWVRPYVKIYDGFGTMVRDVAQFFR 749
>gi|229891620|sp|P0C928.1|RTEL1_DANRE RecName: Full=Regulator of telomere elongation helicase 1
Length = 1177
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 302/767 (39%), Positives = 452/767 (58%), Gaps = 61/767 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP K++GI+V+FPF Y CQ YM KVI+ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPVIKLKGINVDFPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQ--------SSVNSSQSGDS-----KLPTILYTSRTHSQL 107
+ ++ ++ G++ S ++ GD+ +P I+Y SRTHSQL
Sbjct: 61 DHFKD-TISARKITERMGGAELFADRPMSSWGTAATDGDTPTYYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QV+ ELK ++YRPK+ +LGSREQLCI++EV +R + + K ++R C ++
Sbjct: 120 TQVVNELKNTSYRPKICVLGSREQLCINQEV--MRHESNHIKVHMCRAKVSSRSCIFYNN 177
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
V D + + + +D+EDLV G+ CPY+++R L++ D++F PYNYL+DP R+
Sbjct: 178 V-DEKSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQHADVIFMPYNYLLDPKSRR 236
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI-----DISSTRRG 282
+E K +++IFDEAHN+E +C ++ SFDL+ L + I + DIS
Sbjct: 237 AHNIELKGAVVIFDEAHNVEKMCEESTSFDLTPHDLISAIEAVDRLLREQASDISKADSA 296
Query: 283 QSSD-ETLNPD------NFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
+ + E+LN A ++ +L+ LE I + + + G TKPG +I+EL N
Sbjct: 297 EDFNVESLNSGLKMDITTIAKVKQILMDLETAINDFEMPANNQGITKPGSFIFELFEMAN 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIF--------RDKGT 387
+ +T + ++ +E L + ++ +++I++++F + T
Sbjct: 357 VNSKTKTETVEAMEQITGYLAG---RPGVFLNTSGLQKVADIIQLVFVAEPAEGSKKSQT 413
Query: 388 AHS-AYYRVHVREADAN-----AADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
+S ++VH+ ++N DV +++ LS+WCF+PG +MQE R EV
Sbjct: 414 GNSLKEFKVHIHPDNSNFKKKQITDVWASSSTKKQGNVLSYWCFSPGFSMQELLRQEVRC 473
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
IILTSGTLSP+ SF E+++ FP+ +ENPHVI QI+ I+ GP G L++++ R
Sbjct: 474 IILTSGTLSPLSSFTCEMQIPFPVSLENPHVIQRDQIFVSIIEKGPDGVQLSTAFDRRFV 533
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E +GNT+VN++R+VP GLL+FFPSY +MD+ + W+ H +RI K
Sbjct: 534 PENMSSMGNTLVNLSRVVPHGLLVFFPSYPVMDKTLEFWRAKGHA------DRIENVKPM 587
Query: 558 VVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
VEPR F I+ Y K+ D ++SG FFAVCRGK SEGLDFAD GR VVITG+PF
Sbjct: 588 FVEPRGKGTFTEVIDGYYGKVDDPNSSGGSFFAVCRGKASEGLDFADTYGRGVVITGLPF 647
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
DP+V LK +YLD ++ K + + +L+G++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 PPRMDPRVVLKMQYLDEMCRN-----KISGVKYLTGQEWYRQQASRAVNQAIGRVIRHRE 702
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGAI CD RF ++Q+ W++P+++ Y FG +V + +FFR
Sbjct: 703 DYGAIFLCDHRFKSADARNQLPSWVRPYVKIYDGFGTMVRDVAQFFR 749
>gi|402881970|ref|XP_003904529.1| PREDICTED: regulator of telomere elongation helicase 1 [Papio
anubis]
Length = 1301
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/768 (40%), Positives = 450/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ ++FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAW+
Sbjct: 1 MPKIVLNGVTIDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWQ 60
Query: 61 KSLG---SFSTLGSQVNNQISGSQ---SSVNSSQSGD------SKLPTILYTSRTHSQLR 108
+ L S + +V ++ +Q S N++ + + + +P I+Y SRTHSQL
Sbjct: 61 EHLRDTISARKIAERVQGELFPNQALSSWGNTAAAAEDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DIVF PYNYL+D R+
Sbjct: 178 VEEKGLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIVFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--LTACISEAKNCIDISSTRR 281
++ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E +
Sbjct: 238 HSIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKTAQLGEPHP 297
Query: 282 GQSSDE-----TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
S+D + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSRGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M+E R V S
Sbjct: 415 LGPLQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELVRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|332858954|ref|XP_003317100.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan troglodytes]
gi|410301716|gb|JAA29458.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410341613|gb|JAA39753.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/768 (40%), Positives = 451/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E--TLNP--------DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E T +P ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M+E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELLRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|354481991|ref|XP_003503184.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Cricetulus griseus]
Length = 1259
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/769 (40%), Positives = 454/769 (59%), Gaps = 67/769 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS-SVNSSQSGDS-----KLPTILYTSRTHSQLRQVI 111
+ L + S+L +V ++ S+S S ++ GDS +P I+Y SRTHSQL QVI
Sbjct: 61 EHLRDAVSSLKIAERVQGELFASRSLSSWNAADGDSIACYTDIPKIIYASRTHSQLTQVI 120
Query: 112 QELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADY 171
EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H +
Sbjct: 121 SELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYNNVEE 177
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
L +DIEDLV G CPY+++R +++ DI+F PYNYL+D RK +
Sbjct: 178 KSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNMKQQADIIFMPYNYLLDAKSRKAHNI 237
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ-------- 283
+ K +++IFDEAHN+E IC ++ASFDL+ + + + EA N + R Q
Sbjct: 238 DLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL-EAINQVLEEQARLAQQGELQLEF 296
Query: 284 -----SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQ 338
SS ++ ++ A L+ +LL+LE I + + + G TKPG YI+EL A+ IT
Sbjct: 297 SADTPSSGLSMELEDIAKLKMILLRLEGAIDAIQLPGDDRGVTKPGSYIFELFAEAQITF 356
Query: 339 ETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------------DKG 386
+T +++ ++ +++Q + ++ + +I++I+F G
Sbjct: 357 QTKGCILESLD---QIIQHLAGRTGVFINTVGLQKLMDIIQIVFSVDPPEGSPGSLVGLG 413
Query: 387 TAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVG 436
+HS Y+VH+ R A A +D SR LS+WCF+P +M+E V
Sbjct: 414 VSHS--YKVHIHPETSHRRA-AQRSDAWSTTTSRKQGKVLSYWCFSPSHSMRELVCQGVR 470
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W G++P GP G L+S+Y R
Sbjct: 471 TLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDRNQLWVGVIPRGPDGVQLSSAYDKRF 530
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + +R+ K
Sbjct: 531 SEECLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRAQD------LAKRVEVLKP 584
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
VEPR F I+ Y ++ +SGA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 585 LFVEPRNKGSFSEVIDAYYQRVASPGSSGATFLAVCRGKASEGLDFSDMNGRGVIVTGLP 644
Query: 617 FATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
+ DP+V LK ++LD L+ +++ G LSG++WY QQASRAVNQA+GRVIRH
Sbjct: 645 YPPRMDPRVVLKMQFLDELRGRNRAGG------QCLSGQEWYQQQASRAVNQAIGRVIRH 698
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RHDYGAI CD RFA+ K+Q+ W++P+++ Y FG V+ +++FFR
Sbjct: 699 RHDYGAIFLCDHRFAYADTKAQLPSWVRPYLKVYDNFGHVIRDVSQFFR 747
>gi|410219260|gb|JAA06849.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410263662|gb|JAA19797.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/768 (40%), Positives = 451/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E--TLNP--------DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E T +P ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M+E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELLRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|344254979|gb|EGW11083.1| Regulator of telomere elongation helicase 1 [Cricetulus griseus]
Length = 1225
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/769 (40%), Positives = 454/769 (59%), Gaps = 67/769 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS-SVNSSQSGDS-----KLPTILYTSRTHSQLRQVI 111
+ L + S+L +V ++ S+S S ++ GDS +P I+Y SRTHSQL QVI
Sbjct: 61 EHLRDAVSSLKIAERVQGELFASRSLSSWNAADGDSIACYTDIPKIIYASRTHSQLTQVI 120
Query: 112 QELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADY 171
EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H +
Sbjct: 121 SELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYNNVEE 177
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
L +DIEDLV G CPY+++R +++ DI+F PYNYL+D RK +
Sbjct: 178 KSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNMKQQADIIFMPYNYLLDAKSRKAHNI 237
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ-------- 283
+ K +++IFDEAHN+E IC ++ASFDL+ + + + EA N + R Q
Sbjct: 238 DLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL-EAINQVLEEQARLAQQGELQLEF 296
Query: 284 -----SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQ 338
SS ++ ++ A L+ +LL+LE I + + + G TKPG YI+EL A+ IT
Sbjct: 297 SADTPSSGLSMELEDIAKLKMILLRLEGAIDAIQLPGDDRGVTKPGSYIFELFAEAQITF 356
Query: 339 ETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------------DKG 386
+T +++ ++ +++Q + ++ + +I++I+F G
Sbjct: 357 QTKGCILESLD---QIIQHLAGRTGVFINTVGLQKLMDIIQIVFSVDPPEGSPGSLVGLG 413
Query: 387 TAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVG 436
+HS Y+VH+ R A A +D SR LS+WCF+P +M+E V
Sbjct: 414 VSHS--YKVHIHPETSHRRA-AQRSDAWSTTTSRKQGKVLSYWCFSPSHSMRELVCQGVR 470
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W G++P GP G L+S+Y R
Sbjct: 471 TLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDRNQLWVGVIPRGPDGVQLSSAYDKRF 530
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + +R+ K
Sbjct: 531 SEECLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRAQD------LAKRVEVLKP 584
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
VEPR F I+ Y ++ +SGA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 585 LFVEPRNKGSFSEVIDAYYQRVASPGSSGATFLAVCRGKASEGLDFSDMNGRGVIVTGLP 644
Query: 617 FATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
+ DP+V LK ++LD L+ +++ G LSG++WY QQASRAVNQA+GRVIRH
Sbjct: 645 YPPRMDPRVVLKMQFLDELRGRNRAGG------QCLSGQEWYQQQASRAVNQAIGRVIRH 698
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RHDYGAI CD RFA+ K+Q+ W++P+++ Y FG V+ +++FFR
Sbjct: 699 RHDYGAIFLCDHRFAYADTKAQLPSWVRPYLKVYDNFGHVIRDVSQFFR 747
>gi|7706541|ref|NP_057518.1| regulator of telomere elongation helicase 1 isoform 1 [Homo
sapiens]
gi|229462743|sp|Q9NZ71.2|RTEL1_HUMAN RecName: Full=Regulator of telomere elongation helicase 1; AltName:
Full=Novel helicase-like
gi|6969265|gb|AAF33687.1|AF217795_1 helicase-like protein NHL [Homo sapiens]
gi|119595644|gb|EAW75238.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595645|gb|EAW75239.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595647|gb|EAW75241.1| hCG22751, isoform CRA_a [Homo sapiens]
Length = 1219
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 448/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E----------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|334312296|ref|XP_001375942.2| PREDICTED: regulator of telomere elongation helicase 1 [Monodelphis
domestica]
Length = 1605
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 314/772 (40%), Positives = 455/772 (58%), Gaps = 70/772 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKITISGVTVDFPFQPYKCQEDYMTKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQ--------SSVNSSQSGDS-----KLPTILYTSRTHSQL 107
+ T ++ ++ G + S N++ GD+ +P I+Y SRTHSQL
Sbjct: 61 EHFKDTIT-ARKIAERMQGVELFPDRPMSSWGNAATDGDTTAYYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHS 166
QVI EL+ ++YRPK+ +LGSREQLCI+ EV + + Q + CR KK + R C+ ++
Sbjct: 120 TQVISELRNTSYRPKVCVLGSREQLCINPEVRKIESNHIQIHVCR---KKVSTRSCHFYN 176
Query: 167 RVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V + L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R
Sbjct: 177 NVEE-KSTEKELVTSILDIEDLVKSGNKHRVCPYYLSRTLKQQADIIFMPYNYLLDSKTR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--LTACISEA-----KNCI 274
+ ++ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E +N I
Sbjct: 236 RAHNIDLKGTVVIFDEAHNVEKVCEESASFDLTPFDLASGLDAINQVLEEQTKLLQQNEI 295
Query: 275 DISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
+S + ++ A ++ +LLKLE I + + G TKPG YI++L A+
Sbjct: 296 HAQFNMELDNSGLNMELEDIAKVKIILLKLESVIDAIELPGNNTGMTKPGSYIFDLFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------D 384
+IT +T L++ +E +++Q + ++ + +I++I+F
Sbjct: 356 HITFQTKSSLLESLE---QIIQFMAGRTGIFNNTAGLQKLVDIIQIVFSIEPPEGAANLM 412
Query: 385 KGTAHSAYYRVHV----------READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE 434
+G S YY+VH+ + DA A V K K + LS+WCF+PG +M E +
Sbjct: 413 QGHTVSKYYKVHIHLDSSNRKKTQRTDAWTAPVAK-KQGKILSYWCFSPGFSMHELIQQG 471
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V +IILTSGTL+P+ SF+ E+++ F + +ENPHVI QIW GIVP GP G LL+S+Y
Sbjct: 472 VRTIILTSGTLAPISSFSMEMQIPFHVCLENPHVIDQHQIWVGIVPKGPDGVLLSSAYDK 531
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S E LG TI NIAR+VP GLL+FFPSY +M++ + W++ ++ +
Sbjct: 532 RFSDECLSSLGKTIGNIARVVPHGLLVFFPSYPVMEKSLEYWRDHDFAR------KMEEL 585
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K VEPR F I+ Y K+ ++GA F AVCRGK SEGLDFAD GR V+ITG
Sbjct: 586 KAIFVEPRSKGGFTEVIDAYYEKIVCPKSNGATFMAVCRGKASEGLDFADMNGRGVIITG 645
Query: 615 MPFATMTDPKVRLKREYLD-LQAQS-QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
+PF DP+V LK ++LD ++ +S GG+Y L+G +WY QQASRAVNQA+GRV
Sbjct: 646 LPFPPRMDPRVILKMQFLDEMRGKSGAGGQY-------LTGHEWYRQQASRAVNQAIGRV 698
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IRHR D+GAI CD RF + ++Q+ W++P+++ Y FG ++ +FFR
Sbjct: 699 IRHRQDFGAIFLCDHRFTNSDARAQLPSWVRPYVKVYDNFGHIIRDAAQFFR 750
>gi|119595649|gb|EAW75243.1| hCG22751, isoform CRA_d [Homo sapiens]
Length = 1023
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 448/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E----------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|194387848|dbj|BAG61337.1| unnamed protein product [Homo sapiens]
Length = 1004
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 306/768 (39%), Positives = 448/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTG+TLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGRTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E----------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|397477200|ref|XP_003809966.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Pan paniscus]
Length = 1401
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/769 (40%), Positives = 457/769 (59%), Gaps = 64/769 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGEVFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSA-QNNACRFLCKKGTNRRCNHHSR 167
QVI EL+ ++YRPK+ +LGSREQLCIH EV + Q ++CR KK +R C+ ++
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHSCR---KKVASRSCHFYNN 177
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
V + L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQ-ELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRR 236
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSS 285
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 237 AHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPH 296
Query: 286 DE--TLNP--------DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
E T +P ++ A L+ +LL+LE I V + + G TKPG YI+EL A+
Sbjct: 297 PEFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQ 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DK 385
IT +T ++D ++ +++Q + T ++ +++I++I+F
Sbjct: 357 ITFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPA 413
Query: 386 GTAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVG 436
G Y+VH+ A +D A+R LS+WCF+PG +M+E R V
Sbjct: 414 GLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELLRQGVR 473
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R
Sbjct: 474 SLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRF 533
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
S E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + K
Sbjct: 534 SEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----K 586
Query: 557 PV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
P+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+
Sbjct: 587 PLFVEPRSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGL 646
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRH
Sbjct: 647 PYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRH 701
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
R DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 702 RQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|410898938|ref|XP_003962954.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Takifugu rubripes]
Length = 1074
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 302/758 (39%), Positives = 442/758 (58%), Gaps = 52/758 (6%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + + G+ V FPF YDCQ YM KVI+ LQ + N +LESPTGTGKTLCLLCATLAWR
Sbjct: 1 MSSLTLNGVTVNFPFTPYDCQKDYMTKVIECLQKRNNGVLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFST-------LGSQVNNQI---SGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQV 110
+ L + LG + + I S + + + + +P I+Y SRTHSQL QV
Sbjct: 61 EQLKDQISRKMIERRLGGETSQNIPITSWGSVAADGEATCYTDIPKIIYASRTHSQLAQV 120
Query: 111 IQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD 170
I+ELK ++YRPK+ +LGSREQLCI++EV +R + + +K + R C ++ +
Sbjct: 121 IKELKNTSYRPKISVLGSREQLCINQEV--MRQESSHVKVHMCRRKVSTRSCPFYNNTEE 178
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
+ + L +D+EDLV G CPY+++R L++ DI+F PYNYL+DP R+
Sbjct: 179 -ISTDRELTHSILDVEDLVKFGNKKRVCPYYLSRSLKQEADIIFMPYNYLVDPKSRRAHN 237
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI--DISSTRRGQSSDET 288
+E +++IFDEAHNLE C ++ SFDL+ + + I+ + + G + E
Sbjct: 238 IELNGAVVIFDEAHNLEKTCEESTSFDLTPYDVASAIAAVDRLLLEQVQDASLGPTITEQ 297
Query: 289 LNPD---------NFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQE 339
N D A ++ +LL LE I + S E G TKPG +IYELL ++T +
Sbjct: 298 FNADYSGLKIDATTIAKIKKILLDLEAAIDSYDVPS-ERGITKPGIFIYELLERAHLTYQ 356
Query: 340 TAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIF-----RDKGTAHSAYYR 394
T ++ + +E + L Q+ ++ +++IL+++F + +A+++
Sbjct: 357 TKTEVHEALEQISGYLAG---QSGIFLQTGGLQKLADILQLVFCGDPSEKDVKSSAAHFK 413
Query: 395 VHVREADAN----AADVL----KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLS 446
VH+ ++ D+ K LS+WCF+PG +MQ+ V IILTSGTLS
Sbjct: 414 VHIHRDTSHKKKQTTDIWTTSSSNKQGNILSYWCFSPGFSMQDLVNQGVRCIILTSGTLS 473
Query: 447 PMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGN 506
P+ SF E+++ FP+ +EN HVI QI+ +V GP G L+S++ R E LGN
Sbjct: 474 PLSSFTSEMRIEFPVSLENSHVIDRDQIFVSVVDRGPDGVQLSSAFDKRFVPENMASLGN 533
Query: 507 TIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL 566
T+ N+ R+VP GLL+FF S+ LM++ + W+ ERI K VEP+ +
Sbjct: 534 TVANLTRVVPHGLLVFFSSFPLMEKMLEFWRANGQA------ERIDSLKPIFVEPKGKAN 587
Query: 567 FPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
F I+ Y K+ D T G FFAVCRGK SEGLDFAD GRAV+ITG+PF DP+V
Sbjct: 588 FTEVIDGYYNKVNDPQTKGGSFFAVCRGKASEGLDFADTFGRAVIITGLPFPPKMDPRVI 647
Query: 627 LKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCD 686
LK ++LD + + K +KL FLSG+ WY QQA RAVNQA+GRVIRHRHD+GAI+ CD
Sbjct: 648 LKMQFLDEMSSN-----KTSKLKFLSGQQWYKQQAFRAVNQAIGRVIRHRHDFGAILLCD 702
Query: 687 ERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RF +P ++Q+ LW++P++ Y FG+V+ +++FFR
Sbjct: 703 HRFKNPDARAQLPLWVKPYVNQYDSFGNVIRDVSKFFR 740
>gi|119595646|gb|EAW75240.1| hCG22751, isoform CRA_b [Homo sapiens]
gi|119595651|gb|EAW75245.1| hCG22751, isoform CRA_b [Homo sapiens]
Length = 1300
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 448/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E----------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|410055436|ref|XP_003953846.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 1301
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 309/768 (40%), Positives = 451/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E--TLNP--------DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E T +P ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M+E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELLRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|7012929|gb|AAF35243.1| helicase-like protein NHL [Homo sapiens]
Length = 1400
Score = 564 bits (1453), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 448/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E----------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|374674404|dbj|BAA83040.3| KIAA1088 protein, partial [Homo sapiens]
Length = 1400
Score = 564 bits (1453), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 448/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E----------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|426392489|ref|XP_004062582.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Gorilla gorilla gorilla]
Length = 1220
Score = 564 bits (1453), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/768 (40%), Positives = 449/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI---------SGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
+ L S + + ++ + ++ + + + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDAIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHIQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL-LTACISEAKNCIDISSTRRG 282
++ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E + R
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGERHP 297
Query: 283 QSSDETLNP------DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
+ S ++ +P ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M+E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELIRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|119595650|gb|EAW75244.1| hCG22751, isoform CRA_e [Homo sapiens]
Length = 1400
Score = 564 bits (1453), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 448/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGEPHP 297
Query: 287 E----------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|403282703|ref|XP_003932780.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Saimiri boliviensis boliviensis]
Length = 1604
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 306/769 (39%), Positives = 447/769 (58%), Gaps = 64/769 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPFE Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFEPYKCQQEYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISG------SQSSVNSSQSGD-------SKLPTILYTSRTHSQL 107
+ L + ++ ++ G + SS S+ + D + +P I+Y SRTHSQL
Sbjct: 61 EHLRD-TISARKIAERLQGELFPDRALSSWGSAAAADGDPTACYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 120 TQVISELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYN 176
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 NVEEKSLEQELASPILDIEDLVKSGSRHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRR 236
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--LTACISEAKNCIDISSTR 280
++ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E
Sbjct: 237 AHSIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDRVLEEQTKAAQQGEPH 296
Query: 281 RGQSSDE-----TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
G S+D + ++ A L+ +LL+LE I + + G TKPG YI+EL A+
Sbjct: 297 PGFSADTPSSGLNMELEDIAKLKMILLRLEGAIDAIELPGDSSGVTKPGSYIFELFAEAQ 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRD----------K 385
+T +T ++D ++ +++Q + T ++ +++I++I+F +
Sbjct: 357 LTFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGFLE 413
Query: 386 GTAHSAYYRVH----------VREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEV 435
G Y+VH V+ +DA + + K + LS+WCF+PG +M+E R V
Sbjct: 414 GLGALQSYKVHIHPDAGHRRAVQRSDAWSTTAAR-KPGKVLSYWCFSPGHSMRELVRQGV 472
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R
Sbjct: 473 RALILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRR 532
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + +I K
Sbjct: 533 FSEECLSSLGKALGNIARVVPCGLLVFFPSYPVMEKSLEFWRARD------LARKIEALK 586
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
VEPR F I Y ++ ++GA F AVCRGK SEGLDF+D GR V++TG+
Sbjct: 587 PLFVEPRSKVSFSETISAYYERITSPGSTGAAFLAVCRGKASEGLDFSDTNGRGVIVTGL 646
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRH
Sbjct: 647 PYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRH 701
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
R DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 702 RQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVVQFFR 750
>gi|197098236|ref|NP_001124929.1| regulator of telomere elongation helicase 1 [Pongo abelii]
gi|75042437|sp|Q5RE34.1|RTEL1_PONAB RecName: Full=Regulator of telomere elongation helicase 1
gi|55726407|emb|CAH89973.1| hypothetical protein [Pongo abelii]
Length = 1302
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/769 (40%), Positives = 452/769 (58%), Gaps = 63/769 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LES TGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESHTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQIS-----GSQSSVNSSQSGD-----SKLPTILYTSRTHSQL 107
+ L S + +V ++ S + ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERVQGELFPDRALSSWGNAAAAAAGDPIACYTDIPKIIYASRTHSQL 120
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 TQVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHIQIHLCRKKVASRSCHFYN 177
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 NVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRR 237
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQ-- 283
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + ++G+
Sbjct: 238 AHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDIIDQVLEEQTKTAQQGEPH 297
Query: 284 ---SSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
S+D T + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+
Sbjct: 298 PEFSADSTSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQ 357
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK---------- 385
IT +T ++D ++ +++Q + T ++ +++I++I+F
Sbjct: 358 ITFQTKVCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGGPGSLA 414
Query: 386 GTAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVG 436
G Y+VH+ A +D A+R LS+WCF+PG++M+E R V
Sbjct: 415 GLGALQSYKVHIHPDAGHRQTAQRSDAWSTTAARKRGKVLSYWCFSPGLSMRELVRQGVR 474
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R
Sbjct: 475 SLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRF 534
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
S E LG + N AR+VP GLLIFFPSY +M++ + W+ +L E + K
Sbjct: 535 SEECLSSLGKALGNTARVVPCGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----K 587
Query: 557 PV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
P+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+
Sbjct: 588 PLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGL 647
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRH
Sbjct: 648 PYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRH 702
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
R DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 RQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 751
>gi|168269672|dbj|BAG09963.1| tumor necrosis factor receptor superfamily member 6B precursor
[synthetic construct]
Length = 1400
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 307/768 (39%), Positives = 446/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHLQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSD 286
++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++ + G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAHEGEPHP 297
Query: 287 E----------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
E + ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|449486421|ref|XP_002193824.2| PREDICTED: regulator of telomere elongation helicase 1 [Taeniopygia
guttata]
Length = 1107
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 384/1116 (34%), Positives = 566/1116 (50%), Gaps = 126/1116 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + GI V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPRITLNGITVDFPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQ--------SSVNSSQSGD-----SKLPTILYTSRTHSQL 107
+ + ++ +++G + S ++ GD + +P I+Y SRTHSQL
Sbjct: 61 EHFKD-TISARKIAQRMNGVELFPDRPVSSWGTAATDGDVPTYYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QVI ELK + YRPK+ +LGSREQLCI+ EV + N+ ++C+ R H
Sbjct: 120 TQVINELKNTVYRPKICVLGSREQLCINPEV---KRQESNHMQIYMCRMKVMARACHFYN 176
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
+ L + +DIEDLV G CPY+++R L++ DI+F PYNYL+D RK
Sbjct: 177 NVEEKSTEKELIESIMDIEDLVKNGNKHRACPYYLSRSLKQQADIIFMPYNYLLDSKSRK 236
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS--------EAK----NCID 275
++ K +++I DEAHN+E +C +++SFDL+ L + + +AK N I+
Sbjct: 237 AHNLDLKGTVVILDEAHNVEKLCEESSSFDLTPYDLASAMEAINVVLEEQAKVVQQNEIN 296
Query: 276 ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
SS + ++ A ++ +LL+LE I V + + G TK G YI++L A+
Sbjct: 297 AEFNMELASSGLNMELEDIAKIKKILLQLESAIDAVELPANGNGVTKEGSYIFDLFAEAQ 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR---DKGT----- 387
IT +T L++ +E ++LQ + + +S+I++ +F +G
Sbjct: 357 ITLQTKSSLLESLE---QILQFLSGRTGIFVNTSGLHKVSDIIQTVFSVDPPEGVTTGFL 413
Query: 388 ---AHSAYYRVHVREADANA-----ADVLKGKASR----TLSWWCFNPGIAMQEFSRLEV 435
A S YY+VH+ ++N D+ +S+ TLS+WCF+PG +M E R V
Sbjct: 414 PRQAISKYYKVHIHVDNSNQKKKQRTDLWNSSSSKRQGKTLSYWCFSPGYSMHELVRQGV 473
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
+IILTSGTLSP+ SF E+++ FP+ +ENPHVI Q+W GI+P GP G +L S+Y R
Sbjct: 474 RTIILTSGTLSPLSSFTMEMQIPFPVCLENPHVIDKHQLWVGIIPKGPDGTVLTSTYERR 533
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
S +Y LG TI N+ R+VP G+L+FFPSY +MD+ + W+ +RI + K
Sbjct: 534 FSEDYLSSLGKTIGNLVRVVPHGMLVFFPSYPVMDKSLEYWREHDFA------KRIEEVK 587
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
VEPR F I+ Y K+ ++GA F AVCRGK SEGLDFAD GR V+ITG+
Sbjct: 588 PMFVEPRNKGSFSEVIDAYYDKVTCPKSNGAAFLAVCRGKASEGLDFADINGRGVIITGL 647
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PF +P+V LK ++LD +S G +LSG +WY+QQASRAVNQA+GRVIRH
Sbjct: 648 PFPPRMEPRVILKMQFLDEMRRSGAGA------QYLSGREWYSQQASRAVNQAIGRVIRH 701
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLK 735
R DYGAI CD RF + ++ W++P++ Y FG V +++ FF R+ T
Sbjct: 702 RQDYGAIFLCDHRFTTCDVRGKLPSWVRPYVNVYDNFGHAVRSVSVFF---RVAQETMPP 758
Query: 736 LIKTEVSGDVRELKPVDLLDKISLEEVPSSTPA--VDQACYSLHEVKNRNTSS------- 786
+ G L + S E+ S A +D SL + N
Sbjct: 759 PLPQCPPGRAGSLSESNAAPSTSSEQSLSLQKAKNLDDHVPSLKRKRKGNGDGAPSLCVE 818
Query: 787 HSGEIVPANRSSLSPYKGIWASE-----LKNSSDLIQFEKKLLLSGRKSIQYRD------ 835
+ E V R + + SE + +DL+ EK LS S+QY
Sbjct: 819 YEQEFVSPRRKCVGLLDALERSEKSSEDAEEETDLLGEEKAHRLSTL-SLQYEKRLTDEQ 877
Query: 836 ---HEFIDLTSNSSLHAKPRKEELIAPCSTKKRKVLISE----SDQMQCVKKISEIASDA 888
+ I L SN+ A+P+K +T K + S +Q KK + A
Sbjct: 878 KGGRKKIKLVSNTP--AEPKKARATFYIATVKDTLSQQNYELFSKALQQYKKTDDF--HA 933
Query: 889 ESSQPSSFIPITNKVKH-------------EKPQISDSGSRIIAQGSAPSKVDGTTYRIE 935
SQ SS I ++ KH K Q ++ + G K + + R E
Sbjct: 934 MLSQMSSLF-IEDEKKHVLLRDFYQFVRPQHKKQFDEACCNLTGVGCG-YKPEHSLPREE 991
Query: 936 AEIQSEKSKGSHSSAPPCGGEETKG----------SAFLIQVQEKLSATEYKEFVGFMKA 985
EI +++ + S+AP E+ G +A+L VQ L + Y++F + A
Sbjct: 992 REILAKRMGQNASAAPRKEAEKAPGCRREHHQALRTAYLSDVQRALDKSSYRQFYEALLA 1051
Query: 986 MKSKAMKISHVLQSIAKLFAG-PERLPLLRRFKDYV 1020
K K ++ IA L P+ LL+RF +V
Sbjct: 1052 YK-KTDNYDAMVSVIATLTTERPQDFHLLQRFYMFV 1086
>gi|426392493|ref|XP_004062584.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 3
[Gorilla gorilla gorilla]
Length = 1301
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/768 (40%), Positives = 449/768 (58%), Gaps = 62/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI---------SGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
+ L S + + ++ + ++ + + + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDAIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHIQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 VEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL-LTACISEAKNCIDISSTRRG 282
++ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E + R
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQGERHP 297
Query: 283 QSSDETLNP------DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
+ S ++ +P ++ A L+ +LL+LE I V + + G TKPG YI+EL A+ I
Sbjct: 298 EFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQI 357
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKG 386
T +T ++D ++ +++Q + T ++ +++I++I+F G
Sbjct: 358 TFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAG 414
Query: 387 TAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ A +D A+R LS+WCF+PG +M+E R V S
Sbjct: 415 LGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELIRQGVRS 474
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S
Sbjct: 475 LILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFS 534
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L E + KP
Sbjct: 535 EECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KP 587
Query: 558 V-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P
Sbjct: 588 LFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ DP+V LK ++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR
Sbjct: 648 YPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHR 702
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 703 QDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 750
>gi|345789824|ref|XP_543101.3| PREDICTED: regulator of telomere elongation helicase 1 [Canis lupus
familiaris]
Length = 1689
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 310/771 (40%), Positives = 454/771 (58%), Gaps = 70/771 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPFE Y CQ YM KV++ LQ + N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKITLNGVAVDFPFEPYKCQEEYMSKVLECLQKRVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI-------SGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQV 110
+ L S + +V ++ S ++ ++ + + +P I+Y SRTHSQL QV
Sbjct: 61 EHLRDAISAHKIAERVQGELFLDRTLSSWGDAAADAGAACYADIPKIIYASRTHSQLTQV 120
Query: 111 IQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLC-KKGTNRRCNHHSRVA 169
I+EL+ ++YRP++ +LGSREQLCIH EV + N+ LC KK +R C+ ++ V
Sbjct: 121 IRELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYNNVE 177
Query: 170 DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL 229
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 178 EKSLEQ-ELATPILDIEDLVKSGNKHKLCPYYLSRNLKQQADIIFMPYNYLLDTKSRRAH 236
Query: 230 GVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--LTACISEAKNCIDISSTRRG 282
++ K +++IFDEAHN+E +C + ASFDL+ SGL L + E R
Sbjct: 237 SIDLKGTVVIFDEAHNVEKMCEETASFDLTPHDVASGLDVLDQVLEEQTKAAQQDELRSE 296
Query: 283 QSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNIT 337
S+D + ++ A L+ +LL+LE I V + G TKPG YI+EL A+ IT
Sbjct: 297 FSADSVNSGLHMELEDLAKLKMILLRLEAAIDAVELPGDHSGVTKPGSYIFELFAEAQIT 356
Query: 338 QETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK----------GT 387
+T ++D ++ +++Q + + ++ +S+I++I+F G
Sbjct: 357 FQTKGCILDSLD---QIIQHLAGRTGLFSNTAGLQKLSDIIQIVFSADPAEGTPGSLGGP 413
Query: 388 AHSAYYRVHVR----------EADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH+ +DA ++ + K + LS+WCF+PG +M++ + V +
Sbjct: 414 GACQSYKVHIHPDAGHHRKGPRSDAWSSTAAR-KPGKVLSYWCFSPGHSMRQLVQQGVRT 472
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ SFA E+++ FP+ +ENPHVI +QIW GIV GP G L+S++ R S
Sbjct: 473 VILTSGTLAPVSSFALEMQIPFPVCLENPHVIHQQQIWVGIVSRGPDGAQLSSAFDKRFS 532
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK-NTSHGNLTTIWERICKHKK 556
LG + NIAR+VP GLL+FFPSY ++++ + W+ + S G L + K
Sbjct: 533 EACLSSLGKALGNIARVVPHGLLVFFPSYPVLERSLQFWRTHDSAGKLEAL--------K 584
Query: 557 PV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
PV VEPR F ++ Y A++ ++GA F AVCRGK SEGLDFAD GR V+ITG+
Sbjct: 585 PVFVEPRNKGGFSEVVDAYYARVACPGSTGATFLAVCRGKASEGLDFADMNGRGVIITGL 644
Query: 616 PFATMTDPKVRLKREYLD--LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
P+ DP+V LK ++LD + GG+ LSG +WY QQASRAVNQA+GRVI
Sbjct: 645 PYPPRMDPRVVLKMQFLDEIKNHRGPGGQ-------LLSGHEWYRQQASRAVNQAIGRVI 697
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RHRHDYGAI CD RFAH ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 698 RHRHDYGAIFLCDHRFAHVDARAQLPSWVRPHVRVYDSFGPVIRDVAQFFR 748
>gi|300797873|ref|NP_001178786.1| regulator of telomere elongation helicase 1 [Rattus norvegicus]
gi|229891752|sp|Q5RJZ1.2|RTEL1_RAT RecName: Full=Regulator of telomere elongation helicase 1
Length = 1274
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 311/771 (40%), Positives = 455/771 (59%), Gaps = 68/771 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQ--SSVNSSQ--SGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S+ SS S+ +GDS +P I+Y SRTHSQL
Sbjct: 61 EHLRDAVSSLKIAERVQGELFASRTLSSWRSAADANGDSIDCYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVIGELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHMQISLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D RK
Sbjct: 178 VEEKSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNLKQQADIIFMPYNYLLDAKSRKA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ----- 283
++ K +++IFDEAHN+E IC ++ASFDL+ + + + E N + R Q
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGL-EVINQVLEEQARVAQHGELQ 296
Query: 284 --------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
SS + ++ A L+ +LL LE+ I V + + G TKPG YI+EL A+
Sbjct: 297 QEFIIDTSSSGLNMELEDIAKLKMILLHLEEAIDAVQLPGDDRGVTKPGSYIFELFAEAQ 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DK 385
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 357 ITFQTKGCILESLD---QIIQHLTGRTGVFTNTAGLQKLMDIIQIVFSVDPLEGSPGSQV 413
Query: 386 GTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEV 435
G S +Y+VH+ R A A +D ASR LS+WCF+P +M+E + V
Sbjct: 414 GLGSSHFYKVHIHPETSHRRA-AQRSDAWSTTASRKQGKVLSYWCFSPSHSMRELVQQGV 472
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W G++P GP G L+S+Y R
Sbjct: 473 RTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGVIPRGPDGVQLSSAYDKR 532
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + +++ K
Sbjct: 533 FSEECLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWQAQG------MSKKVEALK 586
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
VEPR F I+ Y ++ ++GA F AVCRGK SEGLDF+D GR V++TG+
Sbjct: 587 PLFVEPRNKGSFSEVIDAYYQQVASPGSNGATFLAVCRGKASEGLDFSDMNGRGVIVTGL 646
Query: 616 PFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
P+ DP+V LK ++LD ++ +S+ GG+ LSG++WY QQASRAVNQA+GRVI
Sbjct: 647 PYPPRMDPRVILKMQFLDEMKGRSRVGGQ-------CLSGQEWYQQQASRAVNQAIGRVI 699
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RHRHDYGAI CD RFA+ ++ + W++P+++ Y FG V+ + +FFR
Sbjct: 700 RHRHDYGAIFLCDHRFAYADARAHLPSWVRPYLKVYDNFGRVIRDVAQFFR 750
>gi|38707232|gb|AAR27234.1| DEAH helicase isoform 1 [Mus musculus]
Length = 1209
Score = 561 bits (1445), Expect = e-156, Method: Compositional matrix adjust.
Identities = 311/772 (40%), Positives = 469/772 (60%), Gaps = 70/772 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK--------- 385
IT +T +++ ++ +++Q + + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTRVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 386 -GTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLE 434
G + S Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLSISHSYKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVCQG 471
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 472 VRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAYDK 531
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 532 RFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVEAL 585
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++TG
Sbjct: 586 KPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTG 645
Query: 615 MPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+GRV
Sbjct: 646 LPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIGRV 698
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 699 IRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|38707234|gb|AAR27235.1| DEAH helicase isoform 2 [Mus musculus]
Length = 1203
Score = 560 bits (1444), Expect = e-156, Method: Compositional matrix adjust.
Identities = 311/772 (40%), Positives = 469/772 (60%), Gaps = 70/772 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK--------- 385
IT +T +++ ++ +++Q + + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTRVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 386 -GTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLE 434
G + S Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLSISHSYKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVCQG 471
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 472 VRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAYDK 531
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 532 RFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVEAL 585
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++TG
Sbjct: 586 KPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTG 645
Query: 615 MPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+GRV
Sbjct: 646 LPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIGRV 698
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 699 IRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|38707236|gb|AAR27236.1| DEAH helicase isoform 3 [Mus musculus]
Length = 1164
Score = 560 bits (1444), Expect = e-156, Method: Compositional matrix adjust.
Identities = 311/772 (40%), Positives = 469/772 (60%), Gaps = 70/772 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK--------- 385
IT +T +++ ++ +++Q + + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTRVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 386 -GTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLE 434
G + S Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLSISHSYKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVCQG 471
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 472 VRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAYDK 531
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 532 RFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVEAL 585
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++TG
Sbjct: 586 KPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTG 645
Query: 615 MPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+GRV
Sbjct: 646 LPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIGRV 698
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 699 IRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|38707238|gb|AAR27237.1| DEAH helicase isoform 5 [Mus musculus]
Length = 1170
Score = 560 bits (1444), Expect = e-156, Method: Compositional matrix adjust.
Identities = 308/772 (39%), Positives = 466/772 (60%), Gaps = 70/772 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS---------SVNSSQSGDSKLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ + S + +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK--------- 385
IT +T +++ ++ +++Q + + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTRVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 386 -GTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLE 434
G + S Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLSISHSYKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVCQG 471
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 472 VRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAYDK 531
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 532 RFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVEAL 585
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++TG
Sbjct: 586 KPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTG 645
Query: 615 MPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+GRV
Sbjct: 646 LPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIGRV 698
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 699 IRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|38707240|gb|AAR27238.1| DEAH helicase isoform 6 [Mus musculus]
Length = 1128
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/772 (40%), Positives = 467/772 (60%), Gaps = 70/772 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK--------- 385
IT +T I+E +++Q + + T ++ + +I++I+F
Sbjct: 356 QITFQTKGC---ILESLDQIIQHLAGRTRVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 386 -GTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLE 434
G + S Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLSISHSYKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVCQG 471
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 472 VRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAYDK 531
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 532 RFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVEAL 585
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++TG
Sbjct: 586 KPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTG 645
Query: 615 MPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+GRV
Sbjct: 646 LPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIGRV 698
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 699 IRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|262263441|ref|NP_001001882.3| regulator of telomere elongation helicase 1 isoform 1 [Mus
musculus]
Length = 1209
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/774 (40%), Positives = 469/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|50510779|dbj|BAD32375.1| mKIAA1088 protein [Mus musculus]
Length = 1211
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/774 (40%), Positives = 469/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 3 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 62
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 63 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 122
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 123 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 179
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 180 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 237
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 238 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 297
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 298 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 357
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 358 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 414
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 415 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 471
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 472 QGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 531
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 532 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 585
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 586 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 645
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 646 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 698
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 699 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 752
>gi|262263447|ref|NP_001160139.1| regulator of telomere elongation helicase 1 isoform 4 [Mus
musculus]
gi|219521615|gb|AAI44978.1| Rtel1 protein [Mus musculus]
Length = 1164
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/774 (40%), Positives = 469/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|262263443|ref|NP_001160137.1| regulator of telomere elongation helicase 1 isoform 2 [Mus
musculus]
gi|229891754|sp|Q0VGM9.2|RTEL1_MOUSE RecName: Full=Regulator of telomere elongation helicase 1
gi|148878220|gb|AAI45659.1| Rtel1 protein [Mus musculus]
gi|219519260|gb|AAI44979.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/774 (40%), Positives = 469/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|262263445|ref|NP_001160138.1| regulator of telomere elongation helicase 1 isoform 3 [Mus
musculus]
Length = 1170
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/774 (40%), Positives = 469/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|449274178|gb|EMC83461.1| Regulator of telomere elongation helicase 1, partial [Columba
livia]
Length = 1124
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 309/770 (40%), Positives = 442/770 (57%), Gaps = 68/770 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + GI V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPRITLNGIAVDFPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQ--------SSVNSSQSGD-----SKLPTILYTSRTHSQL 107
+ + ++ +++G + S N++ D + +P I+Y SRTHSQL
Sbjct: 61 EHFKD-TISARKIAQRMNGMELFPERPMSSWGNAATDADIPAYYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QVI ELK + YRPK+ +LGSREQLCIH EV + N+ ++C+ R H
Sbjct: 120 TQVINELKNTVYRPKICVLGSREQLCIHPEV---KRQESNHMQIYMCRMKVMARACHFYN 176
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
+ L + +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 NVEEKSTEKELIESIMDIEDLVKNGNKHRACPYYLSRSLKQQADIIFMPYNYLLDSKSRR 236
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS--------EAK----NCID 275
++ K +++I DEAHN+E +C +++SFDL+ L + + +AK N I+
Sbjct: 237 AHNLDLKGTVVILDEAHNVEKLCEESSSFDLTPYDLASALDAINVVLEEQAKVVQQNEIN 296
Query: 276 ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
SS + ++ A ++ +LL+LE I V + + G TK G YI++L A+
Sbjct: 297 AEFNMEMASSGLNMELEDIAKIKKILLQLESAIDAVELPANGAGVTKEGSYIFDLFAEAQ 356
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR---DKGTAH--- 389
IT +T L++ +E ++LQ + + +S+I++ +F +G+
Sbjct: 357 ITFQTKSSLLESIE---QILQFLSGRTGIFVNTSGLHKLSDIIQTVFNIDPPEGSTGFMP 413
Query: 390 ----SAYYRVHVREADANAADVLKG---------KASRTLSWWCFNPGIAMQEFSRLEVG 436
S YY+VH+ N + K +TLS+WCF+PG +M E R V
Sbjct: 414 HRSISKYYKVHIHLDSNNQKKKQRTDLWNSSSAKKQGKTLSYWCFSPGYSMHELVRQGVR 473
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
+IILTSGTLSP+ SF E+++ FP+ +ENPHVI Q+W GI+P GP G +L S+Y R
Sbjct: 474 TIILTSGTLSPLSSFTMEMQIPFPVSLENPHVIDKHQLWVGIIPKGPDGTVLTSTYERRF 533
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
S +Y LG TI N+ R+VP GLL+FFPSY +MD+ + W+ RI + K
Sbjct: 534 SGDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDFA------RRIEEVKP 587
Query: 557 PVVEPRQSSLFPLAIEDY-MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
VEPR F A DY M K+ ++GA F AVCRGK SEGLDFAD GR V+ITG+
Sbjct: 588 MFVEPRNKGSF--AEVDYLMDKVVCPKSNGAAFLAVCRGKASEGLDFADVNGRGVIITGL 645
Query: 616 PFATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
PF +P+V LK ++LD L++ G +Y LSG +WY+QQASRAVNQA+GRVIR
Sbjct: 646 PFPPRLEPRVVLKMQFLDELRSSGAGTQY-------LSGREWYSQQASRAVNQAIGRVIR 698
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
HR DYGAI CD RF +S++ W++P++ Y FG V +++ FFR
Sbjct: 699 HRQDYGAIFLCDHRFTTGDVRSKLPSWVRPYVNVYDNFGHAVRSVSLFFR 748
>gi|262263449|ref|NP_001160140.1| regulator of telomere elongation helicase 1 isoform 5 [Mus
musculus]
Length = 1128
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 314/774 (40%), Positives = 467/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T I+E +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGC---ILESLDQIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|326428226|gb|EGD73796.1| hypothetical protein PTSG_05489 [Salpingoeca sp. ATCC 50818]
Length = 1032
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/768 (40%), Positives = 452/768 (58%), Gaps = 83/768 (10%)
Query: 5 KIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL- 63
KI G+ V FP YD Q YM +IQ+L NA+LESPTGTGKTLCLLCA+LAW++
Sbjct: 6 KIGGVWVSFPHNPYDLQTAYMNSLIQALNEGKNAMLESPTGTGKTLCLLCASLAWQEQFT 65
Query: 64 ---------------------GSFSTLGSQVNNQISGS--QSSVNSSQSGDS-------- 92
G G Q SG+ + Q G+
Sbjct: 66 KALTAQAEEDAAKAKAKAMAAGLGGGQGPHQGWQASGTGYEQQHQQHQPGNPAQGFTPQK 125
Query: 93 -KLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLL-RGSAQNNAC 150
K P I+Y +RTHSQ+ Q I ELK ++Y+P + +LGSREQLCI+ EVS L +A+ C
Sbjct: 126 PKAPRIIYATRTHSQIAQTIAELKRTSYKPNICVLGSREQLCINPEVSRLDTNAAKTRTC 185
Query: 151 RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKT 209
R K ++ C+++ +V K L D I DIEDLV IGR+ CPY++ R+ ++
Sbjct: 186 R---HKVASQECSYYFQVP---KGKKDLADHGIADIEDLVKIGRSASCCPYYLARDGLES 239
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
+VF PYNY+++ R+ ++ + S++I DEAHN+E +C DA+SFDLS+ L A +E
Sbjct: 240 AQLVFVPYNYILNSRTRRNQRIDVETSVVILDEAHNIESVCEDASSFDLSTTDLAAFSNE 299
Query: 270 AKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELG--FTKPGPYI 327
+ G+ L D+ L L+L++E+++ +P+ ++G + G +I
Sbjct: 300 LARLSTADAEVLGE-----LTADDAKALHKLVLQIEEKLDALPV---KIGAPMQRSGDFI 351
Query: 328 YELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIF----R 383
+ LN+T ET ++ VE AA+ + K ++ C + ++IL+++F +
Sbjct: 352 FRFFEGLNMTFETVQVILPKVEQAADAVGALK------SSRCHLSKFADILRLLFGAETK 405
Query: 384 DKGTAHSAYYRVHVREAD--------ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEV 435
D YY V+V E+ + A RT+S+WCF AM+ + V
Sbjct: 406 DNLAMIRQYYYVNVSESKRQQQQQQQSGWAVAAPAGNPRTISFWCFTSSFAMKSLIQDGV 465
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S++LTSGTLSP+D+FA EL ++FP+R+ENPH+I+ KQ+WAG++ GP G+ LN+SY R
Sbjct: 466 RSVVLTSGTLSPLDTFAAELMVDFPIRLENPHIISKKQVWAGVLTCGPRGHELNASYTTR 525
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
S Y+ +LGN IVN AR+VP GLL+FFPSY M QCI W+ +S +IW++I ++K
Sbjct: 526 SSPAYQADLGNAIVNFARVVPKGLLVFFPSYGFMRQCIEGWQQSSG---RSIWDQIAEYK 582
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
KPVVEP+ F A+E + +LK+ +G+VFFAVCRGKVSEGLDFAD GRAV+ITG+
Sbjct: 583 KPVVEPQNKHEFVAAMEVFYQQLKEPD-AGSVFFAVCRGKVSEGLDFADENGRAVIITGL 641
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ DP+V LK+++LD + ++QG LSG+ WY+ QA+RAVNQA+GRVIRH
Sbjct: 642 PYPAAMDPRVLLKKKFLD-RMKAQGTMR-------LSGQHWYSTQATRAVNQAIGRVIRH 693
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
R DYGAII D RF ++Q+ W++ H+Q + FG+ ++ FF
Sbjct: 694 RKDYGAIILADTRFKRT--RNQLPAWLRAHVQEFRDFGEAQRSVRTFF 739
>gi|149033944|gb|EDL88727.1| similar to helicase-like protein NHL isoform 2 [Rattus norvegicus]
Length = 1264
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/760 (40%), Positives = 453/760 (59%), Gaps = 59/760 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQ--SSVNSSQ--SGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S+ SS S+ +GDS +P I+Y SRTHSQL
Sbjct: 61 EHLRDAVSSLKIAERVQGELFASRTLSSWRSAADANGDSIDCYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVIGELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHMQISLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D RK
Sbjct: 178 VEEKSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNLKQQADIIFMPYNYLLDAKSRKA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQSSD 286
++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + + G+
Sbjct: 238 HNIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEVINQVLEEQARVAQHGELQQ 297
Query: 287 ETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLID 346
E + + +++ LL LE+ I V + + G TKPG YI+EL A+ IT +T +++
Sbjct: 298 EFIIDTSSSVI---LLHLEEAIDAVQLPGDDRGVTKPGSYIFELFAEAQITFQTKGCILE 354
Query: 347 IVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKGTAHSAYYRVH 396
++ +++Q + T ++ + +I++I+F G S +Y+VH
Sbjct: 355 SLD---QIIQHLTGRTGVFTNTAGLQKLMDIIQIVFSVDPLEGSPGSQVGLGSSHFYKVH 411
Query: 397 V------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLS 446
+ R A A +D ASR LS+WCF+P +M+E + V ++ILTSGTL+
Sbjct: 412 IHPETSHRRA-AQRSDAWSTTASRKQGKVLSYWCFSPSHSMRELVQQGVRTLILTSGTLA 470
Query: 447 PMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGN 506
P+ SFA E+++ FP+ +ENPH+I Q+W G++P GP G L+S+Y R S E LG
Sbjct: 471 PLSSFALEMQIPFPVCLENPHIIDKNQLWVGVIPRGPDGVQLSSAYDKRFSEECLSSLGK 530
Query: 507 TIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL 566
+ NIAR+VP GLL+FFPSY +M++ + W+ + +++ K VEPR
Sbjct: 531 ALGNIARVVPHGLLVFFPSYPVMEKSLEFWQAQG------MSKKVEALKPLFVEPRNKGS 584
Query: 567 FPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
F I+ Y ++ ++GA F AVCRGK SEGLDF+D GR V++TG+P+ DP+V
Sbjct: 585 FSEVIDAYYQQVASPGSNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVI 644
Query: 627 LKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
LK ++LD ++ +S+ GG+ LSG++WY QQASRAVNQA+GRVIRHRHDYGAI
Sbjct: 645 LKMQFLDEMKGRSRVGGQ-------CLSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFL 697
Query: 685 CDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
CD RFA+ ++ + W++P+++ Y FG V+ + +FFR
Sbjct: 698 CDHRFAYADARAHLPSWVRPYLKVYDNFGRVIRDVAQFFR 737
>gi|431894622|gb|ELK04422.1| Regulator of telomere elongation helicase 1 [Pteropus alecto]
Length = 1198
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 308/782 (39%), Positives = 451/782 (57%), Gaps = 79/782 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKITLNGVTVDFPFQPYKCQEEYMAKVLECLQKKVNGVLESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQIS--------GSQSSVNSSQSGDSKLPTILYTSRTHSQLRQ 109
+ L S + + ++ GS +S + + + +P ++Y SRTHSQL Q
Sbjct: 61 EHLRDALSAHKIAERAQGELFPDRPLSSWGSAASDRDAPACYADIPKVIYASRTHSQLTQ 120
Query: 110 VIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRV 168
VI EL+ + YRP++ +LGSREQLCIH EV S Q + CR KK +R C+ ++ V
Sbjct: 121 VISELRNTAYRPRVCVLGSREQLCIHPEVKKQESSHMQIHLCR---KKVASRSCHFYNNV 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY++ R L++ DIVF PYNYL+D R+
Sbjct: 178 EEKSLEQ-ELATPILDIEDLVKSGNKHRLCPYYLARNLKQQADIVFMPYNYLLDAKSRRA 236
Query: 229 LGVEWKNSILIFDEAHNL-------------EGICADAASFDLSSGLLTACISEAKNCID 275
++ K +++IFDEAHN+ E +C ++ASFDL+ + + + ++
Sbjct: 237 HSIDLKGTVVIFDEAHNVPPAPRNTVCLRSQEKMCEESASFDLTPHDVASGLDIIDQVLE 296
Query: 276 --ISSTRRGQ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPG 324
+ + G+ S+ + ++ A L+ +LL+LE I V + + G TKPG
Sbjct: 297 EQTKAAQHGELHLAFGVESSAGLNMELEDVAKLKMILLRLEGAIDAVELPGDDRGVTKPG 356
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRD 384
+I+EL A+ IT +T ++D ++ +++Q + + ++ +S+I++I+F
Sbjct: 357 SFIFELFAEAQITSQTKACILDSLD---QIIQHLAGRAGLFSNTAGLQKLSDIIQIVFSA 413
Query: 385 K----------GTAHSAYYRVHVR----------EADANAADVLKGKASRTLSWWCFNPG 424
S Y+VH+ +DA + K K + LS+WCF+PG
Sbjct: 414 DPAEGGLGSTVAPGVSQSYKVHIHPDTSHWRTAPRSDAWNSTAAK-KPGKVLSYWCFSPG 472
Query: 425 IAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
+M+E R V ++ILTSGTL+P+ SFA E+++ FP+ +ENPHVI QIW GIVP GP
Sbjct: 473 YSMRELVRQGVRTLILTSGTLAPVSSFALEMQIPFPVSLENPHVIDKHQIWVGIVPKGPD 532
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
G L+S++ R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ +
Sbjct: 533 GTQLSSAFDKRFSDECLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEFWRAR---DF 589
Query: 545 TTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
+ E + KP+ VEPR + F I Y + + GA F AVCRGK SEGLDFA
Sbjct: 590 ASKLEAL----KPLFVEPRSKAGFSEVIGAYYTSVIRPGSRGAAFLAVCRGKASEGLDFA 645
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQAS 662
D GR VV+TG+P+ DP+V LK ++LD ++ +S E K FLSG+DWY QQAS
Sbjct: 646 DMNGRGVVVTGLPYPPRKDPRVILKMQFLDEMKGRS------EAKGQFLSGQDWYRQQAS 699
Query: 663 RAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRF 722
RAVNQA+GRVIRHRHDYG ++ CD RFA ++Q+ W++PH++ Y FG V+ + +F
Sbjct: 700 RAVNQAIGRVIRHRHDYGVVLLCDHRFACADARAQLPSWVRPHVKVYDHFGHVIRDVAQF 759
Query: 723 FR 724
FR
Sbjct: 760 FR 761
>gi|327284022|ref|XP_003226738.1| PREDICTED: regulator of telomere elongation helicase 1-like [Anolis
carolinensis]
Length = 1142
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/756 (40%), Positives = 436/756 (57%), Gaps = 54/756 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP K+ GI V+FPFE Y CQ YM +V++ LQ + N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPKIKLNGITVDFPFEPYKCQEEYMSRVLECLQKQVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQS------GDSKLPT-------ILYTSRTHSQL 107
+ + ++ ++ G++ + S D++LP I+Y SRTHSQL
Sbjct: 61 EHFKD-AISAQKIAQRLGGAELFADRPMSFWGNAVTDAELPAYYTDIPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHS 166
QVI ELK + YRPK+ +LGSREQLCIH EV + Q + CR K T R C+ ++
Sbjct: 120 TQVIGELKNTVYRPKVCVLGSREQLCIHPEVKKQESNHVQIHMCRM---KVTTRTCHFYN 176
Query: 167 RVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V + L + +D+EDLV G CPY+++R L++ DI+F PYNYL+D R
Sbjct: 177 NVEE-KSTEKELINPILDVEDLVKSGNKHRVCPYYLSRTLKQQADIIFMPYNYLLDSKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ--- 283
+ ++ K +++I DEAHN+E C + ASFDL+ L + + ++ + + Q
Sbjct: 236 RAHNLDLKGTVVILDEAHNVEKQCEELASFDLTPYDLASAMDAISIVLEEQAKKVQQNEF 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS+ + ++ A ++ +LL LE I V + G TK G YI++L A
Sbjct: 296 NSEFNMERVSSELNMEVEDIAKIKKILLLLEDAIDAVELAPDGSGITKDGSYIFDLFAKA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR 394
IT +T +++ +E + L + T + ++I+++ + R
Sbjct: 356 QITFQTYSSILESLEQIQQYLAG---RTGIFTNTAGLHKCTDIIQVHIHPDSSNQRKKQR 412
Query: 395 VHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQE 454
D + V K K + LS+WCF+PG +M E R V +IILTSGTLSP+ SF E
Sbjct: 413 T-----DLWNSSVTK-KQGKVLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTME 466
Query: 455 LKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
+++ FP+ +ENPHVI Q+W GI+P GP G LL+S+Y R S E LG TI N+ +I
Sbjct: 467 MQIPFPICLENPHVIDKHQVWVGILPKGPDGGLLSSTYEKRFSPECLSSLGKTIGNLVKI 526
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
+P GLL+FFPSY +MD+ + WK+ E+I K VEPR F I+ Y
Sbjct: 527 IPHGLLVFFPSYPVMDKSLEYWKDHR------FVEKIEAVKPIFVEPRNKGTFTEVIDAY 580
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD- 633
K+ GAVF AVCRGK SEGLDFAD GR V+ITG+PF DP+V LK ++LD
Sbjct: 581 YEKIVCPKAKGAVFLAVCRGKASEGLDFADTNGRGVIITGLPFPPRLDPRVVLKMQFLDE 640
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
++A+S GG+ FLSG WY QQASRAVNQA+GRVIRHR D+GAI CD RF +
Sbjct: 641 MRARSGGGQ-------FLSGNSWYKQQASRAVNQAIGRVIRHRQDFGAIFLCDHRFMNID 693
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERIC 729
++Q+ W++P+++ Y FG VV +++FFR + C
Sbjct: 694 TRAQLPSWVRPYVKIYENFGHVVRDVSQFFRTAQKC 729
>gi|111493941|gb|AAI05579.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 310/774 (40%), Positives = 467/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VETKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK--------- 385
IT +T +++ ++ +++Q + ST ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVSTNTAGLQKLMDIIQIVFSADPPEGSPGSL 412
Query: 386 ---GTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA AVCRGK SEGLD +D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATLLAVCRGKASEGLDSSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 750
>gi|348533666|ref|XP_003454326.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oreochromis niloticus]
Length = 1193
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/766 (39%), Positives = 447/766 (58%), Gaps = 60/766 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP+ + G+ V FPF Y+CQ YM KVI+ LQ K N +LESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPSLTLSGVTVNFPFSPYECQKAYMNKVIECLQKKVNGVLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSL-GSFST------LGSQV--NNQIS--GSQSSVNSSQSGDSKLPTILYTSRTHSQLRQ 109
++ G+ S LG ++ N +S G+ ++ + + +P I+Y SRTHSQL Q
Sbjct: 61 ENFKGTISARKIAERLGKEMFPNTPLSSWGTAATDGDKPTYYTDVPKIVYASRTHSQLAQ 120
Query: 110 VIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVA 169
VI ELK ++YRPK+ +LGSREQLCI++EV +R + + K + R C +++ V
Sbjct: 121 VISELKNTSYRPKVCVLGSREQLCINQEV--MRQESNHVKVHMCRGKVSTRSCVYYNNVE 178
Query: 170 DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL 229
+ + L + +D+EDLV G CPY+++R L++ D++F PYNYL+DP RK
Sbjct: 179 E-KSTDRDLVNSILDVEDLVQFGTKQRVCPYYLSRSLKQQADVIFMPYNYLLDPKSRKAH 237
Query: 230 GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA-------------KNCIDI 276
++ +++IFDEAHN+E C ++ SFDL+ + + I+ K+ ++
Sbjct: 238 NIDLNGAVVIFDEAHNVEKTCEESTSFDLTPYDVASAINAVDRLLVEQAKEISHKDSVNE 297
Query: 277 SSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
SS L+ A ++ +LL LE I + S + G TKPG +IYE+L ++
Sbjct: 298 DVNVESLSSGLKLDLSTIAKIKQILLDLEAAIDSYEVPSDK-GITKPGIFIYEVLERAHL 356
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIF---------RDKGT 387
T + + +E + L Q ++ +S+I++++F R +
Sbjct: 357 TYSNKTAVYEALEQISGYLAG---QPGIFLNTSGLQKLSDIIQLVFCGEPSEKDRRHQME 413
Query: 388 AHSAYYRVHVREADA-----NAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSI 438
++A+++VH+ ++ + DV +S+ LS+WCF+PG +MQ+ V I
Sbjct: 414 TNTAHFKVHIHRDNSVHKKKQSVDVWASSSSKKQGNILSYWCFSPGFSMQDLVNQGVRCI 473
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTLSP+ SF E+++ FP+R+EN HVI QI+ I+ GP G L+S++ R
Sbjct: 474 ILTSGTLSPLSSFTSEMRIEFPVRLENSHVIERDQIFVSIIAQGPDGAHLSSAFDRRFVP 533
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
E LGNT+ N++R+VP GLL+FFPS+ LM++ + WK H N RI K
Sbjct: 534 ENMASLGNTVANLSRVVPHGLLVFFPSFPLMEKTLEFWKANGHAN------RIENIKPMF 587
Query: 559 VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFA 618
VEP+ F I+ Y +K+ D ++ G FFAVCRGK SEGLDFAD GR V+ITG+PF
Sbjct: 588 VEPKGKGTFNDVIDGYYSKVNDPASKGGSFFAVCRGKASEGLDFADTYGRGVIITGLPFP 647
Query: 619 TMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
DP+V LK ++LD + K L +LSG+DWY QQA RAVNQA+GRVIRH+ D
Sbjct: 648 PKNDPRVILKMQFLD-----EMNRKKAPGLKYLSGQDWYKQQAFRAVNQAIGRVIRHKED 702
Query: 679 YGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
YGAI CD+RF ++Q+ W++ +++ FG+VV +++FFR
Sbjct: 703 YGAIFLCDQRFKSADARAQLPSWVRSYVRLCDSFGNVVRDVSQFFR 748
>gi|449664763|ref|XP_002167953.2| PREDICTED: regulator of telomere elongation helicase 1-like [Hydra
magnipapillata]
Length = 1225
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 314/792 (39%), Positives = 456/792 (57%), Gaps = 89/792 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M I G++++FPFE Y+CQ+ YMEKVI LQ N LLESPTGTGKTLCLLCATL WR
Sbjct: 1 MVNIVICGVNIDFPFEPYECQIKYMEKVITCLQKGLNGLLESPTGTGKTLCLLCATLGWR 60
Query: 61 KSL--------------GSFS-TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHS 105
++ +FS +LGS + + SG +++ S + G +P I+Y SRTHS
Sbjct: 61 ETYVARLQLERVGKLQQNAFSDSLGSTLG-EASGEKNAGGSWERGFLDVPKIIYASRTHS 119
Query: 106 QLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCK-KGTNRRCNH 164
Q+ Q + ELK + Y PK+ +LGSREQ+CI+ EV +R NN +C+ K ++C
Sbjct: 120 QITQCVNELKNTRYVPKICVLGSREQMCINSEV--MR-EENNNGKVHMCRIKVAGKQCFF 176
Query: 165 HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
++ + + ++ + +DIEDLV+IG CPY+M REL+K D++F PYNY++D
Sbjct: 177 YNNLEERSEDKDKVPPGMLDIEDLVSIGTEKKFCPYYMARELRKEADLLFMPYNYVLDFK 236
Query: 225 FRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI-------S 277
R GV+ N+I++ DEAHNLE C + ASF+LSS L +CI +++ CI+I
Sbjct: 237 ARNVHGVDLTNTIVLLDEAHNLESHCENNASFELSSFDLASCIEDSQQCIEILLQKEEEG 296
Query: 278 STRRGQSSDETLNPDNFAILRA--------LLLKLEKRIAEVPINSKELGFT-------- 321
T ++S L ++ ++++ + K I ++ +K + +
Sbjct: 297 LTSLDEASIGDLTTEDASLMKKWCGVFMDNMFEKYAANIIKLIPQAKVIKYMLDMTTVTV 356
Query: 322 ---------KPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE 372
+ ++++ LA LN+T + ++++ +E + +L K + ++
Sbjct: 357 KKNTTVYGLEMQLFLFDELAKLNVTNNSKEQILETLEKMSGVLASTKSKAFGGKNYA-LD 415
Query: 373 SISNILKIIFRDKGTAH----------SAYYRVHVREAD----------ANAADVLKGKA 412
++ LK +F A +Y+VH+ D A ++ K +
Sbjct: 416 KFASALKTMFMRVSEASCETSKDHLSTQRFYKVHISAEDDKKQKSLDAWAQSSKQTKKYS 475
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
+RTLS+WCFNPG+ M+E V SIILTSGTLSP+ S E + F + +EN HVI +
Sbjct: 476 ARTLSYWCFNPGLTMKELRDQGVRSIILTSGTLSPLASLKAEFLIPFDVELENGHVIEKQ 535
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
Q++ GI+P GP G LNSSY++R + EY+ LGNTIVN++RI+PDGLL+FFPSY +MD
Sbjct: 536 QVFVGILPQGPDGKKLNSSYQSRSTSEYQVSLGNTIVNLSRIIPDGLLVFFPSYPVMDMV 595
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
+A W+ IW RI +K VE R F I+++ K+ D + GAVFFAVC
Sbjct: 596 LAKWQECG------IWNRIATNKGLYVEGRGKLGFNETIDEFYLKIHDPALKGAVFFAVC 649
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGKVSEGLDF+D GR VVITG+PF DP+V LK++YLD E+K +S
Sbjct: 650 RGKVSEGLDFSDANGRGVVITGLPFPPSFDPRVILKQQYLD--------EHKSNVT--IS 699
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF 712
G++WY QQASRAVNQA+GRVIRH++D+GAI+ CDERF PS K + WI+ + Y F
Sbjct: 700 GKEWYRQQASRAVNQAIGRVIRHKNDFGAILLCDERFCQPSAKEHLPSWIKQQTKEYKDF 759
Query: 713 GDVVYTLTRFFR 724
G L FFR
Sbjct: 760 GQAQRDLVIFFR 771
>gi|148675458|gb|EDL07405.1| regulator of telomere elongation helicase 1 [Mus musculus]
Length = 1273
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/764 (40%), Positives = 463/764 (60%), Gaps = 67/764 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS---------SVNSSQSGDSKLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ + S + +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQS 284
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 285 SDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKL 344
E + + +++ LL+LE+ I V + + G TKPG YI+EL A+ IT +T +
Sbjct: 296 QQEFIVDTSSSVI---LLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEAQITFQTKGCI 352
Query: 345 IDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------------DKGTAHSAY 392
++ ++ +++Q + T ++ + +I++I+F G +HS
Sbjct: 353 LESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSLVGLGISHS-- 407
Query: 393 YRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSIILTS 442
Y+VH+ R A A +D ASR LS+WCF+P +M+E V ++ILTS
Sbjct: 408 YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVCQGVRTLILTS 466
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
GTL+P+ SFA E+++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y R S E
Sbjct: 467 GTLAPLSSFALEMQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAYDKRFSEECLS 526
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++ K VEPR
Sbjct: 527 SLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVEALKPLFVEPR 580
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++TG+P+ D
Sbjct: 581 NKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMD 640
Query: 623 PKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
P+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+GRVIRHRHDYG
Sbjct: 641 PRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIGRVIRHRHDYG 693
Query: 681 AIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
AI CD RFA+ ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 694 AIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHVIRDVAQFFR 737
>gi|321469304|gb|EFX80285.1| hypothetical protein DAPPUDRAFT_128417 [Daphnia pulex]
Length = 892
Score = 554 bits (1427), Expect = e-154, Method: Compositional matrix adjust.
Identities = 309/781 (39%), Positives = 454/781 (58%), Gaps = 64/781 (8%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW---RKS 62
+ + +EFPF+ YD Q +ME+VI+ LQ N LLESPTGTGKTLCLLC+TL W RK+
Sbjct: 6 LNNVPIEFPFQPYDVQEKFMERVIECLQKGVNGLLESPTGTGKTLCLLCSTLGWLATRKA 65
Query: 63 L---GSFS-TLGSQVNNQISGSQS-SVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS 117
G + +G + NQ+S + + + + +P I+Y SRTHSQL QVI ELK S
Sbjct: 66 QIQSGQLAGDMGVDIKNQLSNATGLGWGDAATPGAGVPKIIYASRTHSQLSQVISELKRS 125
Query: 118 NYR-PKMVILGSREQLCIHREVSLLRGSAQNNACRF-LC-KKGTNRRCNHHSRVADYMKN 174
+YR K+ ILGSR+QLCIH EVS NNA + +C + T R C H+ + D K
Sbjct: 126 SYRYMKVCILGSRDQLCIHPEVS----KETNNAVKLHMCHARTTTRTCYFHTNL-DAKKE 180
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
P + +DIEDLV +G+ CPYFMT+E++K DI+F PYNYL+DP RK +E +
Sbjct: 181 EPDFKMDVLDIEDLVTLGKKHSACPYFMTKEIRKGADIIFMPYNYLLDPKVRKIHNIELQ 240
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN---CIDISSTRRGQSSDE---- 287
+I+IFDEAHN+E +C +++S +L S + C+ E + + R S ++
Sbjct: 241 GNIVIFDEAHNVEKMCEESSSIELRSLDIALCVDEVTQRYFLLQVMKKFRENSDNDGIMD 300
Query: 288 TLNP--------DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQE 339
L+P D+ IL+A+ L+LEK I +PI S E G T PG ++ ++LA +++
Sbjct: 301 ILSPSTPKDFSLDDLCILKAMFLELEKAIDAIPITSPE-GNTLPGEFMLDILAKADLSPG 359
Query: 340 TAYKLIDIVEVAAELLQEDKLQ--NKKSTTACRIESISNILKIIFR------DKGTAHSA 391
+ D+++ + L +K T ++ S+++KI+F D
Sbjct: 360 KKDVIADLLDRVIQFLTVANTSPYQRKGTG---LQKFSDLVKIVFSKSHFTADHMERVKR 416
Query: 392 YYRVHVR--------EADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSG 443
Y+VH++ + D+ + + GKA R LS+WCF+PG M++ +ILTSG
Sbjct: 417 SYKVHIKVEQPKSRGKGDSWSTPKVVGKAGRVLSYWCFSPGFGMRDLVEEGARCLILTSG 476
Query: 444 TLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQE 503
TLSP++SFA EL++ FP+ +ENPH+I+S Q+ G+V GP G L+SSY+NR + +Y Q
Sbjct: 477 TLSPLNSFAAELQVPFPVTLENPHIISSSQVLVGVVTHGPDGTQLDSSYKNRSNSQYVQS 536
Query: 504 LGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQ 563
LG TI + A++VPDGLL+FFPSY +M C W+ L+ +W+ I + K VEP
Sbjct: 537 LGRTIRSTAQVVPDGLLVFFPSYPVMKACQEAWQ------LSGLWDAINQVKPIFVEPNS 590
Query: 564 SSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDP 623
F A+ + + GA F AVCRGKVSEGLDF D GRAV+ITG+P+ DP
Sbjct: 591 KEGFQEAMTGFYNAVASEDRKGACFMAVCRGKVSEGLDFCDGNGRAVIITGLPYPPSRDP 650
Query: 624 KVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
+V K++YL+ K + L+G+ WY +A+RAVNQA+GRVIRH+ DYGAI+
Sbjct: 651 RVMEKQKYLE-------DNRKNPQFKGLTGQQWYRLEATRAVNQAIGRVIRHQKDYGAIL 703
Query: 684 FCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSG 743
CD+RF+ Q+S W++P + + K G ++ L FFR + + + I+ +
Sbjct: 704 LCDQRFSGKDIIQQLSAWVRPRVVNFPKIGPLLRDLGIFFRNAEVTCPGSSRAIRAPTAV 763
Query: 744 D 744
D
Sbjct: 764 D 764
>gi|440889948|gb|ELR44730.1| Regulator of telomere elongation helicase 1 [Bos grunniens mutus]
Length = 1264
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 311/773 (40%), Positives = 446/773 (57%), Gaps = 76/773 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP ++G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKITLKGVTVDFPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGD--------SKLPTILYTSRTHS 105
+ L + ++ + SG S N+ GD S LP L + T +
Sbjct: 61 EHLRD-AVSARRIAERASGELFPDRTLASWGNAIPEGDVPEACPHFSALPPHLPWTLTQA 119
Query: 106 QLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHH 165
L + + S +P++ +LGSREQLCIH EV + N+ LC++ R H
Sbjct: 120 GLSR-----RESPCQPRVCVLGSREQLCIHPEV---KKQESNHMQVHLCRRKVASRSCHF 171
Query: 166 SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D
Sbjct: 172 YNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKS 231
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL---------LTACISEAK 271
R+ G++ K +++IFDEAHN+E +C +AASFDL+ SGL T +A+
Sbjct: 232 RRAHGIDLKGTVVIFDEAHNVEKMCEEAASFDLTPHDVASGLDVIDQVLEERTKVAQQAE 291
Query: 272 NCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELL 331
+ S+ G S L P++ A L+ +LL+LE I V + G TKPG YI+EL
Sbjct: 292 LHPEFSADSAG--SGLNLEPEDLAKLKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELF 349
Query: 332 ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------DK 385
A+ IT +T ++D ++ +L+Q + T ++ + +I++I+F D
Sbjct: 350 AEAQITFQTKGCILDSLD---QLIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDP 406
Query: 386 GTA---HSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRL 433
G S Y+VH+ A +DV A+R LS+WCF+PG +M+E R
Sbjct: 407 GPMVGLASQSYKVHIHLDAGHRRTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQ 466
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
V ++ILTSGTL+PM SF+ E+++ FP+ +ENPHVI QIW G++P GP G L+S++
Sbjct: 467 GVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFD 526
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R S E LG + NI+R+VP GLL+FFPSY +M++ + W+ + R +
Sbjct: 527 RRFSDECLSSLGKVLSNISRVVPHGLLVFFPSYPVMEKSLEFWRARD-------FTRKLE 579
Query: 554 HKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
+KP+ VEPR F +E + A++ +SGA+F AVCRGK SEGLDFAD GR V++
Sbjct: 580 VRKPLFVEPRSKGGFSEVMEAFYARVAAPESSGAIFLAVCRGKASEGLDFADVNGRGVIV 639
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
TG+P+ DP+V LK ++LD ++AQS G FLSG DWY QQASRAVNQA+GR
Sbjct: 640 TGLPYPPRMDPRVLLKMQFLDEMKAQSGAGG------QFLSGHDWYRQQASRAVNQAIGR 693
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
VIRHRHDYGA+ CD RFAH ++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 694 VIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPHVKVYDSFGHVIRDVAQFFR 746
>gi|323510681|ref|NP_116575.3| regulator of telomere elongation helicase 1 isoform 2 [Homo
sapiens]
Length = 1243
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 307/792 (38%), Positives = 448/792 (56%), Gaps = 86/792 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYR------------------------PKMVILGSREQLCIHREVSLLRGS 144
QVI EL+ ++YR PK+ +LGSREQLCIH EV +
Sbjct: 121 QVINELRNTSYRSRCRATLWVLETAPPRPTVLSPTRPKVCVLGSREQLCIHPEV---KKQ 177
Query: 145 AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTR 204
N+ LC+K R H + L +DIEDLV G CPY+++R
Sbjct: 178 ESNHLQIHLCRKKVASRSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSR 237
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLT 264
L++ DI+F PYNYL+D R+ ++ K +++IFDEAHN+E +C ++ASFDL+ L
Sbjct: 238 NLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLA 297
Query: 265 ACISEAKNCID--ISSTRRGQSSDE----------TLNPDNFAILRALLLKLEKRIAEVP 312
+ + ++ + ++G+ E + ++ A L+ +LL+LE I V
Sbjct: 298 SGLDVIDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVE 357
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE 372
+ + G TKPG YI+EL A+ IT +T ++D ++ +++Q + T ++
Sbjct: 358 LPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQ 414
Query: 373 SISNILKIIFR----------DKGTAHSAYYRVHVR-----EADANAADVLKGKASR--- 414
+++I++I+F G Y+VH+ A +D A+R
Sbjct: 415 KLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRG 474
Query: 415 -TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
LS+WCF+PG +M E R V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q
Sbjct: 475 KVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQ 534
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
IW G+VP GP G L+S++ R S E LG + NIAR+VP GLLIFFPSY +M++ +
Sbjct: 535 IWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSL 594
Query: 534 ACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
W+ +L E + KP+ VEPR F I Y A++ ++GA F AVC
Sbjct: 595 EFWRAR---DLARKMEAL----KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVC 647
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGK SEGLDF+D GR V++TG+P+ DP+V LK ++LD + + QGG + FLS
Sbjct: 648 RGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLS 702
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF 712
G++WY QQASRAVNQA+GRVIRHR DYGA+ CD RFA ++Q+ W++PH++ Y F
Sbjct: 703 GQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNF 762
Query: 713 GDVVYTLTRFFR 724
G V+ + +FFR
Sbjct: 763 GHVIRDVAQFFR 774
>gi|46452191|gb|AAS98192.1| DEAH helicase isoform 1 [Mus spretus]
Length = 1209
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 309/774 (39%), Positives = 465/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQ
Sbjct: 61 QHLRDAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E ++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG + + +F R
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|397477198|ref|XP_003809965.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan paniscus]
Length = 1090
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 309/793 (38%), Positives = 455/793 (57%), Gaps = 88/793 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGEVFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYR------------------------PKMVILGSREQLCIHREVSLLRGS 144
QVI EL+ ++YR PK+ +LGSREQLCIH EV +
Sbjct: 121 QVINELRNTSYRSRCRATLWVLETAPPRPTVLSPTRPKVCVLGSREQLCIHPEVKKQESN 180
Query: 145 -AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMT 203
Q ++CR KK +R C+ ++ V + L +DIEDLV G CPY+++
Sbjct: 181 HLQIHSCR---KKVASRSCHFYNNVEEKSLEQ-ELASPILDIEDLVKSGSKHRVCPYYLS 236
Query: 204 RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLL 263
R L++ DI+F PYNYL+D R+ ++ K +++IFDEAHN+E +C ++ASFDL+ L
Sbjct: 237 RNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDL 296
Query: 264 TACISEAKNCID--ISSTRRGQSSDE----------TLNPDNFAILRALLLKLEKRIAEV 311
+ + ++ + ++G+ E + ++ A L+ +LL+LE I V
Sbjct: 297 ASGLDVIDQVLEEQTKAAQQGEPHPEFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAV 356
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
+ + G TKPG YI+EL A+ IT +T ++D ++ +++Q + T +
Sbjct: 357 ELPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGL 413
Query: 372 ESISNILKIIFR----------DKGTAHSAYYRVHVR-----EADANAADVLKGKASR-- 414
+ +++I++I+F G Y+VH+ A +D A+R
Sbjct: 414 QKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKR 473
Query: 415 --TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
LS+WCF+PG +M+E R V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I
Sbjct: 474 GKVLSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH 533
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
QIW G+VP GP G L+S++ R S E LG + NIAR+VP GLLIFFPSY +M++
Sbjct: 534 QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKS 593
Query: 533 IACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
+ W+ +L E + KP+ VEPR F I Y A++ ++GA F AV
Sbjct: 594 LEFWRAR---DLARKMEAL----KPLFVEPRSKGGFSETISAYYARVAAPGSTGATFLAV 646
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
CRGK SEGLDF+D GR V++TG+P+ DP+V LK ++LD + + QGG + FL
Sbjct: 647 CRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FL 701
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
SG++WY QQASRAVNQA+GRVIRHR DYGA+ CD RFA ++Q+ W++PH++ Y
Sbjct: 702 SGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDN 761
Query: 712 FGDVVYTLTRFFR 724
FG V+ + +FFR
Sbjct: 762 FGHVIRDVAQFFR 774
>gi|38707228|gb|AAR27232.1| DEAH helicase isoform 6 [Mus spretus]
Length = 1128
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 311/774 (40%), Positives = 463/774 (59%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQ
Sbjct: 61 QHLRDAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T I+E +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGC---ILESLDQIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E ++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG + + +F R
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|81872267|sp|Q6H1L8.1|RTEL1_MUSSP RecName: Full=Regulator of telomere elongation helicase 1
gi|38707220|gb|AAR27228.1| DEAH helicase isoform 2 [Mus spretus]
Length = 1203
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 309/774 (39%), Positives = 465/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQ
Sbjct: 61 QHLRDAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLC-KKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + N+ LC KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEV---KKQESNHMQISLCRKKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E ++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG + + +F R
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|38707222|gb|AAR27229.1| DEAH helicase isoform 3 [Mus spretus]
Length = 1164
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 309/774 (39%), Positives = 465/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQ
Sbjct: 61 QHLRDAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E ++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG + + +F R
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|38707226|gb|AAR27231.1| DEAH helicase isoform 5 [Mus spretus]
Length = 1170
Score = 551 bits (1419), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/774 (39%), Positives = 465/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQ
Sbjct: 61 QHLRDAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E ++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG + + +F R
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|38707224|gb|AAR27230.1| DEAH helicase isoform 4 [Mus spretus]
Length = 1165
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/774 (39%), Positives = 465/774 (60%), Gaps = 74/774 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS----SVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ ++ SGDS +P I+Y SRTHSQ
Sbjct: 61 QHLRDAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T +++ ++ +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGCILESLD---QIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHV------READANAADVLKGKASR----TLSWWCFNPGIAMQEFSR 432
G +HS Y+VH+ R A A +D ASR LS+WCF+P +M+E
Sbjct: 413 VGLGISHS--YKVHIHPETSHRRA-AKRSDAWSTTASRKQGKVLSYWCFSPSQSMRELVC 469
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V ++ILTSGTL+P+ SFA E ++ FP+ +ENPH+I Q+W GIVP GP G L+S+Y
Sbjct: 470 QGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLWVGIVPRGPDGVQLSSAY 529
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R S E LG + NIAR+VP GLL+FFPSY +M++ + W+ + + ++
Sbjct: 530 DKRFSEECLSSLGKALSNIARVVPHGLLVFFPSYPVMEKSLEFWQ------VQGLARKVE 583
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F I+ Y ++ +++GA F AVCRGK SEGLDF+D GR V++
Sbjct: 584 ALKPLFVEPRNKGSFSEVIDAYYQQVASPASNGATFLAVCRGKASEGLDFSDMNGRGVIV 643
Query: 613 TGMPFATMTDPKVRLKREYLD-LQAQSQ-GGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
TG+P+ DP+V LK ++LD ++ +S GG+ LSG++WY QQASRAVNQA+G
Sbjct: 644 TGLPYPPRMDPRVVLKMQFLDEMRGRSGVGGQ-------CLSGQEWYQQQASRAVNQAIG 696
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RVIRHRHDYGAI CD RFA+ ++Q+ W++P+++ Y FG + + +F R
Sbjct: 697 RVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHAIRDVAQFLR 750
>gi|432960238|ref|XP_004086424.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oryzias latipes]
Length = 1167
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 302/773 (39%), Positives = 448/773 (57%), Gaps = 72/773 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP+ + G+ V+FPF YDCQ YM KV+Q LQ K N +LESPTGTGKTLCLLCATLAWR
Sbjct: 1 MPSLTLHGVTVDFPFPPYDCQKDYMAKVLQCLQQKVNGVLESPTGTGKTLCLLCATLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSS--------QSGDSK-----LPTILYTSRTHSQL 107
+ + ++ ++ G N++ GD + +P I+Y SRTHSQL
Sbjct: 61 EHFRD-TISACKIAERLKGENMFPNTTLASWGTAATDGDKQAYYLDVPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QVI EL+ ++YRPK+ +LGSREQLCI+ EV +R + + K + R C +++
Sbjct: 120 AQVIGELRNTSYRPKVCVLGSREQLCINPEV--MRQESNHVKVHMCRGKVSTRSCLYYNN 177
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
V D + L + +D+EDLV G CPY+++R L++ DI+F PYNYL+DP R+
Sbjct: 178 V-DERSTDKDLVNSILDVEDLVKFGNKQKVCPYYLSRSLKQQADIIFMPYNYLLDPKSRR 236
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI--DISSTRRGQSS 285
+E +++IFDEAHNLE +C +++SFDL+ + A I+ + T G+ +
Sbjct: 237 AHNIELSGAVVIFDEAHNLEKMCEESSSFDLTPYDVAAAITAVDRLLVEQAKETGGGEFT 296
Query: 286 DETLNPDNF-----------AILRALLLKLEKRIA--EVPINSKELGFTKPGPYIYELL- 331
E +N + A ++ +LL LE I +VP + G TKPG +IYELL
Sbjct: 297 AEDVNVETLSSGLKLDITKLAKVKQILLDLEAAIDAYDVPADR---GVTKPGIFIYELLE 353
Query: 332 -ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKG---- 386
A L+ + +TA ++E +++ Q ++ +S+I++++F +
Sbjct: 354 RAHLSYSTKTA-----VLEALDQIVGYLAGQPGIFLNTSGLQKLSDIIQLVFSGEADGKE 408
Query: 387 ------TAHSAYYRVHV-READANA--------ADVLKGKASRTLSWWCFNPGIAMQEFS 431
++SA+++VH+ R++ +N K LS+WCF+PG +MQ+
Sbjct: 409 QQQQQMQSNSAHFKVHIHRDSSSNKRKQSTNPWTSSSSKKQGNILSYWCFSPGFSMQDLE 468
Query: 432 RLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
R V IILTSGTLSP+ SF E+++ FP+ +EN HVI QI+ +V GP G L+S+
Sbjct: 469 RQGVRCIILTSGTLSPLSSFTSEMRIEFPVSLENSHVIERDQIFVSVVDRGPDGVPLSSA 528
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
+ R E LGNT+ N +R+VP GLL+FFPS+ LM++ + WK H +RI
Sbjct: 529 FDRRFVPENMSSLGNTVANFSRVVPHGLLVFFPSFPLMEKTLDFWKANGHA------DRI 582
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
K VEP+ S F I+ Y K+ D ++ G FFAVCRGK SEGLDFAD R V+
Sbjct: 583 ENVKPMFVEPKGSGSFSEIIDGYYNKVSDPASKGGSFFAVCRGKASEGLDFADTFSRGVI 642
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
ITG+PF DP+V LK ++L+ +++ K + +L G++WY QQA RAVNQA+GR
Sbjct: 643 ITGLPFPPRMDPRVILKMQFLEEMSKN-----KAPGVRYLLGQEWYRQQAFRAVNQAIGR 697
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
VIRH+ DYGAI CD+RF ++ + W++PH++ Y FG+VV +++FFR
Sbjct: 698 VIRHKEDYGAIFLCDQRFKSSDARALLPSWVKPHVRVYDGFGNVVRDVSQFFR 750
>gi|426392491|ref|XP_004062583.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Gorilla gorilla gorilla]
Length = 1244
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 308/792 (38%), Positives = 449/792 (56%), Gaps = 86/792 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI---------SGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
+ L S + + ++ + ++ + + + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDAIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYR------------------------PKMVILGSREQLCIHREVSLLRGS 144
QVI EL+ ++YR PK+ +LGSREQLCIH EV +
Sbjct: 121 QVINELRNTSYRSRCRATLWVLETAPPRPTVLSPTRPKVCVLGSREQLCIHPEV---KKQ 177
Query: 145 AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTR 204
N+ LC+K R H + L +DIEDLV G CPY+++R
Sbjct: 178 ESNHIQIHLCRKKVASRSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSR 237
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS----- 259
L++ DI+F PYNYL+D R+ ++ K +++IFDEAHN+E +C ++ASFDL+
Sbjct: 238 NLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLA 297
Query: 260 SGL-LTACISEAKNCIDISSTRRGQSSDETLNP------DNFAILRALLLKLEKRIAEVP 312
SGL + + E + R + S ++ +P ++ A L+ +LL+LE I V
Sbjct: 298 SGLDVIDQVLEEQTKAAQQGERHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVE 357
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE 372
+ + G TKPG YI+EL A+ IT +T ++D ++ +++Q + T ++
Sbjct: 358 LPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQ 414
Query: 373 SISNILKIIFR----------DKGTAHSAYYRVHVR-----EADANAADVLKGKASR--- 414
+++I++I+F G Y+VH+ A +D A+R
Sbjct: 415 KLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRG 474
Query: 415 -TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
LS+WCF+PG +M+E R V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q
Sbjct: 475 KVLSYWCFSPGHSMRELIRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQ 534
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
IW G+VP GP G L+S++ R S E LG + NIAR+VP GLLIFFPSY +M++ +
Sbjct: 535 IWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSL 594
Query: 534 ACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
W+ +L E + KP+ VEPR F I Y A++ ++GA F AVC
Sbjct: 595 EFWRAR---DLARKMEAL----KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVC 647
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGK SEGLDF+D GR V++TG+P+ DP+V LK ++LD + + QGG + FLS
Sbjct: 648 RGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLS 702
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF 712
G++WY QQASRAVNQA+GRVIRHR DYGA+ CD RFA ++Q+ W++PH++ Y F
Sbjct: 703 GQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNF 762
Query: 713 GDVVYTLTRFFR 724
G V+ + +FFR
Sbjct: 763 GHVIRDVAQFFR 774
>gi|194379638|dbj|BAG63785.1| unnamed protein product [Homo sapiens]
Length = 1243
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/792 (38%), Positives = 447/792 (56%), Gaps = 86/792 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +L SPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILGSPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + + ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYR------------------------PKMVILGSREQLCIHREVSLLRGS 144
QVI EL+ ++YR PK+ +LGSREQLCIH EV +
Sbjct: 121 QVINELRNTSYRSRCRATLWVLETAPPRPTVLSPTRPKVCVLGSREQLCIHPEV---KKQ 177
Query: 145 AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTR 204
N+ LC+K R H + L +DIEDLV G CPY+++R
Sbjct: 178 ESNHLQIHLCRKKVASRSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSR 237
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLT 264
L++ DI+F PYNYL+D R+ ++ K +++IFDEAHN+E +C ++ASFDL+ L
Sbjct: 238 NLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLA 297
Query: 265 ACISEAKNCID--ISSTRRGQSSDE----------TLNPDNFAILRALLLKLEKRIAEVP 312
+ + ++ + ++G+ E + ++ A L+ +LL+LE I V
Sbjct: 298 SGLDVIDQVLEEQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVE 357
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE 372
+ + G TKPG YI+EL A+ IT +T ++D ++ +++Q + T ++
Sbjct: 358 LPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQ 414
Query: 373 SISNILKIIFR----------DKGTAHSAYYRVHVR-----EADANAADVLKGKASR--- 414
+++I++I+F G Y+VH+ A +D A+R
Sbjct: 415 KLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRG 474
Query: 415 -TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
LS+WCF+PG +M E R V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I Q
Sbjct: 475 KVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQ 534
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
IW G+VP GP G L+S++ R S E LG + NIAR+VP GLLIFFPSY +M++ +
Sbjct: 535 IWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSL 594
Query: 534 ACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
W+ +L E + KP+ VEPR F I Y A++ ++GA F AVC
Sbjct: 595 EFWRAR---DLARKMEAL----KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVC 647
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGK SEGLDF+D GR V++TG+P+ DP+V LK ++LD + + QGG + FLS
Sbjct: 648 RGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLS 702
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF 712
G++WY QQASRAVNQA+GRVIRHR DYGA+ CD RFA ++Q+ W++PH++ Y F
Sbjct: 703 GQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNF 762
Query: 713 GDVVYTLTRFFR 724
G V+ + +FFR
Sbjct: 763 GHVIRDVAQFFR 774
>gi|157120352|ref|XP_001653621.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|122117342|sp|Q16X92.1|RTEL1_AEDAE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|108875002|gb|EAT39227.1| AAEL008960-PA [Aedes aegypti]
Length = 1010
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 312/789 (39%), Positives = 443/789 (56%), Gaps = 75/789 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
MP Y+I GI V FPFE Y Q YM +VI+ LQN N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MPEYQINGITVNFPFEPYQVQRDYMSRVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWV 60
Query: 60 -------------------------RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKL 94
RK LG G + ++ + +
Sbjct: 61 LHKKAQVQANMRTNITDLKEFEMVQRKKLGGDGGSGME---ELLDKLHDGCGPEGAKWGV 117
Query: 95 PTILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSREQLCIHREVSLLRG-SAQNNACRF 152
P I+Y SRTHSQL QV+QE+K ++Y K VILGSR+QLCIH EVS G S + N C+
Sbjct: 118 PKIVYASRTHSQLTQVMQEMKNTSYSFMKGVILGSRDQLCIHPEVSKEEGNSTKTNLCK- 176
Query: 153 LCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
K +R C+ +SRV + + + +DIEDLV +G CP+F+++EL ++ DI
Sbjct: 177 --AKVQSRTCSFYSRVESCKERPEVVSNVIMDIEDLVKVGTKVRACPFFLSKELIESADI 234
Query: 213 VFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+F PYNYL+DP RK +E N+I+I DEAHN+E +C ++AS + S + CI + +
Sbjct: 235 LFMPYNYLLDPKARKANNLEISNTIIILDEAHNVEKMCEESASMQIRSTDIALCIDDVTS 294
Query: 273 CIDISSTRRG-QSSDET---LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIY 328
+ + DET D+ A+L+ +LL+LEK + +P+ + G T PG YI+
Sbjct: 295 IMKVMDHSVAIPEDDETKKDFTIDDLALLKEMLLQLEKTVDSIPVMFSQGGNTFPGTYIF 354
Query: 329 ELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTA 388
E+ NI + + + ++E + + +N ++ ++ L IIF G
Sbjct: 355 EIFEKANIKEGNYHIIAQLLENIIQYIATITEKNNFVRRGGGLQILAEALSIIFAGSGPE 414
Query: 389 HSAY----YRVH------------VREADANAAD---VLKGKA-SRTLSWWCFNPGIAMQ 428
+ A Y+VH V++AD A V KA ++ +S+WCFNPG M+
Sbjct: 415 YRASIDKCYKVHIEIEEQKKTRGNVKQADGWTATKQLVPSVKANAKVVSFWCFNPGFGMR 474
Query: 429 EFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLL 488
+ SIILTSGTL+P+ EL + +R+ENPH+I Q+ IV GP L
Sbjct: 475 QLLGRNARSIILTSGTLAPLKPLISELDIPIAVRLENPHIIDGSQVCVKIVGQGPDKESL 534
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
NSSY NRD+ +Y LG TI++ I+P GLL+FFPSY L+++C W+ T IW
Sbjct: 535 NSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYPLLNKCQEAWQETG------IW 588
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
+I + K VEPR F + +Y K+ D GAVF AVCRGKVSEGLDFAD GR
Sbjct: 589 AQISRTKPIFVEPRGKDQFLNTMSEYYQKINDPDGKGAVFMAVCRGKVSEGLDFADMNGR 648
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
AV+ITG+PF + D +V LK++YL E + + +SG++WY+ +A+RAVNQA
Sbjct: 649 AVIITGLPFPPLKDARVILKKKYLQ--------EVRTRENEIISGDEWYSLEAARAVNQA 700
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC--YSKFGDVVYTLTRFFRE- 725
+GRVIRH++DYGAI+ CD RF + +KSQ+S WIQ H+ + FG ++ L+RFFR
Sbjct: 701 IGRVIRHKNDYGAILLCDNRFHNHRQKSQLSSWIQKHLNTNQHQNFGPIIGELSRFFRNA 760
Query: 726 ERICGSTNL 734
E+I + L
Sbjct: 761 EKILPQSKL 769
>gi|441639260|ref|XP_004090200.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Nomascus leucogenys]
Length = 1342
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 306/793 (38%), Positives = 450/793 (56%), Gaps = 88/793 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ ++FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTIDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQI----SGSQSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L S + +V ++ + S ++ +GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRDGISARKIAERVQGELFPDRALSSWGNAAAAAGDPIGXYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYR------------------------PKMVILGSREQLCIHREVSLLRGS 144
QVI EL+ ++YR PK+ +LGSREQLCIH EV +
Sbjct: 121 QVINELRNTSYRSHCGTTLWLLETAPPGPTVLSPTRPKVCVLGSREQLCIHPEV---KKQ 177
Query: 145 AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTR 204
N+ LC+K R H + L +DIEDLV G CPY+++R
Sbjct: 178 ESNHIQIHLCRKKVASRSCHFYNNVEEKGLEQELASPILDIEDLVKNGSKHRVCPYYLSR 237
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLT 264
L++ DI+F PYNYL+D R+ ++ K +++IFDEAHN+E +C ++ASFDL+ L
Sbjct: 238 NLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLA 297
Query: 265 ACISEAKNCIDISSTRRGQS------SDETLNP------DNFAILRALLLKLEKRIAEVP 312
+ + ++ + Q S ++ +P ++ A L+ +LL+LE I V
Sbjct: 298 SGLDVIDQVLEEQTKMAQQGKPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVE 357
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE 372
+ + G TKPG YI+EL A+ IT +T ++D ++ +++Q + T ++
Sbjct: 358 LPGDDSGVTKPGSYIFELFAEAQITFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQ 414
Query: 373 SISNILKIIFR----------DKGTAHSAYYRVHV----------READANAADVLKGKA 412
+++I++I+F G Y+VH+ + +DA + + K
Sbjct: 415 KLADIIQIVFSVDPSEGGPGSPAGLGALQSYKVHIHPDAGHRRTNQRSDAWSTTAAR-KR 473
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
+ LS+WCF+PG +M+E R V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I
Sbjct: 474 GKVLSYWCFSPGHSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH 533
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
QIW G+VP GP G L+S++ R S E LG + NIAR+VP GLLIFFPSY +M++
Sbjct: 534 QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPCGLLIFFPSYPVMEKS 593
Query: 533 IACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
+ W+ +L E + KP+ VEPR F I Y A++ ++GA F AV
Sbjct: 594 LEFWRAR---DLARKMEAL----KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAV 646
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
CRGK SEGLDF+D GR V++TG+P+ D + LK ++LD + + QGG + FL
Sbjct: 647 CRGKASEGLDFSDTNGRGVIVTGLPYPPRMDHRXVLKMQFLD-EMKGQGGAGGQ----FL 701
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
SG++WY QQASRAVNQA+GRVIRHR DYGA+ CD RFA ++Q+ W++PHI+ Y
Sbjct: 702 SGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHIRVYDN 761
Query: 712 FGDVVYTLTRFFR 724
FG V+ + +FFR
Sbjct: 762 FGHVIRDVAQFFR 774
>gi|326932020|ref|XP_003212120.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Meleagris gallopavo]
Length = 1136
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 296/736 (40%), Positives = 429/736 (58%), Gaps = 66/736 (8%)
Query: 35 KCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQ--------SSVNS 86
K N +LESPTGTGKTLCLLC+TLAWR+ + ++ +++G + S N+
Sbjct: 16 KVNGILESPTGTGKTLCLLCSTLAWREHFKD-TISARKIAQRMNGVELFPDRPMSSWGNA 74
Query: 87 SQSGD-----SKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLL 141
+ GD + +P I+Y SRTHSQL QVI ELK + YRPK+ +LGSREQLCI+ EV
Sbjct: 75 ATDGDIPAYYTDIPKIIYASRTHSQLTQVINELKNTVYRPKVCVLGSREQLCINPEV--- 131
Query: 142 RGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYF 201
+ N+ ++C+K R H + L D +DIEDLV G CPY+
Sbjct: 132 KRQESNHMQIYMCRKKVMARACHFYNNVEEKSTEKGLMDSIMDIEDLVKNGSKHRACPYY 191
Query: 202 MTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSG 261
++R L++ DI+F PYNYL+D R+ +E K +++IFDEAHN+E +C +++SFDL++
Sbjct: 192 LSRSLKQQADIIFMPYNYLLDAKSRQAHNIELKGTVIIFDEAHNVERLCEESSSFDLTAY 251
Query: 262 LLTACIS--------EAK----NCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA 309
L + I +AK N ++ SS + ++ A ++ +LL+LE I
Sbjct: 252 DLASAIDVINVVLEEQAKVVQQNEVNAEFNMESISSGLNMELEDIAKIKKILLQLESAID 311
Query: 310 EVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTAC 369
V + + G TK G YI+EL A IT +T L++ +E ++LQ +
Sbjct: 312 AVELPPNDSGVTKDGSYIFELFAKAQITFQTKASLLESLE---QILQFLSGRTGIFINTS 368
Query: 370 RIESISNILKIIFR----DKGTAH------SAYYRVHVREADANA------ADVLKGKAS 413
+ +S+I++ +F + T+ S YY+VH+ ++N D+ A+
Sbjct: 369 GLHKLSDIIQTVFNIDLPEDTTSFLPPQSISRYYKVHIHLDNSNQKKKKERTDLWDSSAA 428
Query: 414 R----TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI 469
+ TLS+WCF+PG +M E R V +IILTSGTLSP+ SF E+++ FP+ +ENPHVI
Sbjct: 429 KKQGKTLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIPFPVLLENPHVI 488
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+Q+W GI+P GP G +LNS+Y R S +Y LG TI N+ R+VP GLL+FFPSY +M
Sbjct: 489 DKRQLWVGIIPKGPDGTVLNSTYERRFSEDYLSSLGKTIGNLVRVVPHGLLVFFPSYPVM 548
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFF 589
D+ + W+ +RI + K VEPR F I+ Y K+ ++GA F
Sbjct: 549 DKSLEYWREHDFA------KRIEEVKPMFVEPRNKGSFAEVIDAYYGKIACPKSNGAAFL 602
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYL-DLQAQSQGGEYKETKL 648
AVCRGK SEGLDFAD GR V+ITG+PF +P+V LK ++L +++ S G +Y
Sbjct: 603 AVCRGKASEGLDFADMNGRGVIITGLPFPPRWEPRVVLKMQFLNEMKKSSMGAQY----- 657
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
LSG WYNQQASRAVNQA+GRVIRHR DYGAI CD+RF + + ++ W++P++
Sbjct: 658 --LSGHQWYNQQASRAVNQAIGRVIRHRQDYGAIFLCDDRFTTENVRGKLPSWVRPYVNV 715
Query: 709 YSKFGDVVYTLTRFFR 724
Y FG V +++ FFR
Sbjct: 716 YDNFGHAVRSVSVFFR 731
>gi|170034957|ref|XP_001845338.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|229891619|sp|B0W9F4.1|RTEL1_CULQU RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|167876796|gb|EDS40179.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 978
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 343/974 (35%), Positives = 507/974 (52%), Gaps = 114/974 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
MP Y I GI V FPFE Y Q YM +VI+ LQN N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MPEYLINGIPVNFPFEPYQVQRDYMARVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 60 -----------RKSLGSFSTL-------------GSQVNNQISGSQSSVNSSQSGDSKLP 95
R ++ +++ + + + G +P
Sbjct: 61 LHKKAQVQASQRTNVSELKEFEFEKKKMGGGGGGPKPEMDKLLDELNENSGKEGGRWGVP 120
Query: 96 TILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSREQLCIHREVSLLRGSA-QNNACRFL 153
I+Y SRTHSQL Q +QE+K ++Y + VILGSR+QLCIH EV+ G+A + N C+
Sbjct: 121 KIIYASRTHSQLTQAMQEMKNTSYGFMRAVILGSRDQLCIHPEVAKEEGNAVKTNLCK-- 178
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
K R C+ +SRV + K P + G +DIEDLV + CP+FM++EL + D+
Sbjct: 179 -AKIQARACSFYSRV-EACKERPEITGSTIMDIEDLVRVSTKLKACPFFMSKELIENADV 236
Query: 213 VFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+F PYNYL+DP RK +E N+I+I DEAHN++ +C ++AS + S + CI + +
Sbjct: 237 LFMPYNYLLDPKARKANNLELANTIIILDEAHNVDKMCEESASMQIRSSDIALCIDDVTS 296
Query: 273 CIDISSTRRGQSSDET----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIY 328
+ + D+ D+ A+L+ +LL LEK + E+P+ + G T+PG YI+
Sbjct: 297 IMKVMDNTVAIPEDDDAKKDFTIDDLALLKEMLLSLEKTVDEIPVMFSQGGSTQPGTYIF 356
Query: 329 ELLADLNITQETAYKLI-----DIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR 383
E+ NI +E Y +I +I++ A + +++ + ES+S I+F
Sbjct: 357 EIFEKANI-KEGNYHIIAQLLENIIQYIATITEKNNFVRRGGGLQILAESLS----IMFA 411
Query: 384 DKGTAH----SAYYRVHV------------READANAAD---VLKGKA-SRTLSWWCFNP 423
G + Y+ H+ ++AD A V KA ++ +++WCFNP
Sbjct: 412 GSGPQYRESIDKCYKCHIDIEEQKKVRGNTKQADGWTATKQLVPSVKANAKVINFWCFNP 471
Query: 424 GIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGP 483
G M++ SIILTSGTL+P+ EL + +++ENPH+I Q+ IV GP
Sbjct: 472 GFGMRQLLGRNARSIILTSGTLAPLKPLISELDIPIAVKLENPHIIDGSQVCVKIVGQGP 531
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
LNSSY NRD+ +Y LG TI++ I+P GLL+FFPSY L+++C W+ T
Sbjct: 532 DKESLNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYPLLNKCQEAWQETG--- 588
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
IW +I + K VEPR F + +Y AK+ D GAVF AVCRGKVSEGLDFA
Sbjct: 589 ---IWAQISRTKPIFVEPRGKDQFLNTMTEYYAKINDPDGKGAVFMAVCRGKVSEGLDFA 645
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
D GRA +ITG+PF + D +V LK+ YL E + + +SG++WY+ +A+R
Sbjct: 646 DMNGRACIITGLPFPPLKDARVILKKRYLQ--------EVRTRENEIISGDEWYSLEAAR 697
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC--YSKFGDVVYTLTR 721
AVNQA+GRVIRH++DYGAI+ CD RF +P +K+Q+S WIQ H+ + FG +V L++
Sbjct: 698 AVNQAIGRVIRHKNDYGAILLCDNRFHNPRQKAQLSSWIQKHLNTAQHPTFGPIVRELSQ 757
Query: 722 FFRE-ERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAV--DQACYSLHE 778
FFR E+ L R L P+ I+L VP ST + + L +
Sbjct: 758 FFRNAEKTLPQAKL----------TRSLAPLGPEPPIAL--VPDSTSLLVSGETKKKLDD 805
Query: 779 VKNRNTSSHSGEIVPANRSSLSPYKGIWASELKNSSDLIQFEKKLLLSGRKSIQYRDHEF 838
+KN + V A + LS Y+ + SD K LS R + Q R +F
Sbjct: 806 IKNNFIKIENSNAVTAFK--LSDYQH------AHRSDATAASGKDFLS-RLNTQVRTIDF 856
Query: 839 IDLTSNS--------SLHAKPRKEELIAPCSTKKRKVLISESDQMQCVKKISEIASDAES 890
D++S ++H + R E KKRKV++ + + + + E
Sbjct: 857 NDMSSAGPSSQAGLVAIHKRERSNESTMVTQQKKRKVVLIPQETISLDDSLEVLEVKPER 916
Query: 891 SQPSSFIPITNKVK 904
P + + +K
Sbjct: 917 QAPEDRVELLKVIK 930
>gi|198421637|ref|XP_002120480.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 1008
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 301/763 (39%), Positives = 438/763 (57%), Gaps = 64/763 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI VEFPF AY+ Q YM KVIQ+L NA LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPALDIHGIKVEFPFTAYEVQKSYMTKVIQALNTHQNAALESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPT--ILYTSRTHSQLRQVIQELKTSN 118
+ + L N +S + +S +S DS +P I+Y SRTHSQ+ QV++ELK ++
Sbjct: 61 RQ--HLNELKKHTN-PVSQEDAWSSSEKSKDSAIPAPKIIYASRTHSQISQVVKELKRTD 117
Query: 119 YRPKMVI--LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRR-CNHHSRVADYMKNN 175
Y + I LGSREQ+CIH EVS N A +C+ N+ C ++ V D KNN
Sbjct: 118 YGKDITISILGSREQMCIHPEVS---KQTSNQAMVHMCRGKINKHTCQFYNNVEDAKKNN 174
Query: 176 PHLGDEPIDIEDLVNIGRTFGPCPYFMTREL--QKTVDIVFAPYNYLIDPWFRKGLGVEW 233
+ +DIE+LV +G++ CPY+ RE+ Q I+F PYNYL+D R +E
Sbjct: 175 I-FTTKVMDIEELVTVGKSRTVCPYYSEREVSKQNECGIIFTPYNYLLDRKSRATNNLEI 233
Query: 234 KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS-------TRRGQSSD 286
+ +I+IFDEAHNLE +C ++ SFDL+S + CI E + +D ++ G +
Sbjct: 234 RGNIVIFDEAHNLEKLCEESTSFDLTSLEVAKCIEEVGDVLDAATKFEESGTVADGHENG 293
Query: 287 ETLNPDNF-----AILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETA 341
E+L+ F AI++++ + LEK + +V +N ++PG +++E L+ +N+T+ T
Sbjct: 294 ESLSLSEFKSQDLAIMKSVFIALEKLLDQVELNKDTKSRSEPGKFMFEFLSKINLTESTY 353
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIF---RDKGTAHSAY------ 392
++D+V+ + L L N ++ S I+K+ F D+ H
Sbjct: 354 QIMLDVVDKISTYLS--TLSNSLRIRGAALQKFSEIVKVAFSWMEDETKGHMTRAQRMQE 411
Query: 393 ----YRVHVRE--ADANAADVLK------GKASRTLSWWCFNPGIAMQEFSRLEVGSIIL 440
YRVH+ E + DV K K RT+S+WCF+PG AM + V ++IL
Sbjct: 412 LCMCYRVHICENAETGKSTDVWKRSANTSSKPGRTISFWCFSPGYAMTNLVKCGVRNLIL 471
Query: 441 TSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY 500
TSGTLSP++SF EL+++FP+ +EN HVI Q++ + G G LLNS+++ R +
Sbjct: 472 TSGTLSPLESFTSELQIDFPITLENDHVIDKHQVFVITLTHGKKGGLLNSTFKTRKDVNQ 531
Query: 501 KQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVE 560
QELG T+ ++ P G L+FFPSY M + + WK S N+ T+ E++ K VE
Sbjct: 532 VQELGLTVADMIAAAPGGALVFFPSYSAMAEYLTIWKENS--NVMTLVEKV---KPCTVE 586
Query: 561 PRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
P+ AI+ Y D +T G F AVCRGKVSEGLDF+D GR V+I G+P+
Sbjct: 587 PKNKHELRTAIDKYYT---DVNTGGGTFLAVCRGKVSEGLDFSDDNGRTVIIVGIPYPPA 643
Query: 621 TDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
DP++++K +LD +++G S L+G +WY QQA RAVNQA+GRVIRHR+DYG
Sbjct: 644 FDPRIKMKMAFLD-DLRTKGA------TSLLTGREWYRQQACRAVNQAIGRVIRHRYDYG 696
Query: 681 AIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
AI+ CD R+A + S++ W+QPH+ ++ + L FF
Sbjct: 697 AIVLCDHRYAGRDQLSELPKWVQPHVVKFNNAAKCIRRLRSFF 739
>gi|255088938|ref|XP_002506391.1| predicted protein [Micromonas sp. RCC299]
gi|226521663|gb|ACO67649.1| predicted protein [Micromonas sp. RCC299]
Length = 644
Score = 541 bits (1393), Expect = e-150, Method: Compositional matrix adjust.
Identities = 287/652 (44%), Positives = 403/652 (61%), Gaps = 35/652 (5%)
Query: 1 MPTY--KIRG------IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCL 52
MPTY K++G V+FP++AYDCQ+ ME+V+++L NALLESPTGTGKTLCL
Sbjct: 1 MPTYGLKVKGRGEEVTYSVDFPYDAYDCQVTMMERVVEALHAGENALLESPTGTGKTLCL 60
Query: 53 LCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQ 112
LCA L WR+ + + + ++ + P I+Y SRTHSQL QVI+
Sbjct: 61 LCAALGWREKAHAGGGPDDVTVGPDARAAAAARGDDRAPDRGPLIVYASRTHSQLAQVIR 120
Query: 113 ELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM 172
EL+ + YRP+M I+GSR+Q+C+H++V +L G+AQN AC+ + +R C HH+ + +
Sbjct: 121 ELRATRYRPRMAIMGSRQQMCVHKDVRVLAGAAQNAACK---ARTQSRSCAHHNELEHFR 177
Query: 173 KNNPHLG-DEPIDIEDLVNIGR------TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ P+ G D+P+DIEDLV +G GPCPYFM+ ++ K DIVF PYNY++DP
Sbjct: 178 RREPNFGRDDPVDIEDLVKLGERGVVGGGCGPCPYFMSLDMYKEADIVFMPYNYVVDPAM 237
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSS 285
R LG +I++FDEAHN+E +C+DAA FD+ + L I+EA+ + + G +
Sbjct: 238 RDVLGDRLDGAIVLFDEAHNIESVCSDAAGFDIPASHLAQAINEAQEAFEAAGADPGADA 297
Query: 286 DETLNPD-NFAILRALLLKLEKRIA-EVPINSKELGFTKPGPYIYELLADLNITQETAYK 343
+ P + LR +LL LE ++A +V N +E KPG +++ELLA L IT++T
Sbjct: 298 RKPPRPAAEYKQLRGVLLALEDKVAAQVGNNGEEC--VKPGEWLFELLASLKITEQTLEM 355
Query: 344 LIDIVEVAAELLQEDKL----QNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE 399
+ I + AA LL + +++ + RI ++ L++ FR + H +R+ +
Sbjct: 356 IKSIAQDAASLLAGEAAAVGQRSRARASGYRINELAEALELAFRARREGHVGSFRLRIGA 415
Query: 400 ADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
++ A TLS+WCF+P + M + V S+ILTSGTLSPM SFA EL LNF
Sbjct: 416 DESRGGFGAGHGAGPTLSFWCFSPSVTMSHLAEKGVKSVILTSGTLSPMSSFASELGLNF 475
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
+R+ENPHV+ Q+W G+VPVGPSG LNS+YR RD+ EYK ELGN +VN ARIVPDG+
Sbjct: 476 RVRLENPHVVAPHQVWGGVVPVGPSGKRLNSTYRFRDTDEYKSELGNVVVNFARIVPDGM 535
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
L+FFPSY +M C+ W+NT +IWERIC K VVEP F A +++ L+
Sbjct: 536 LVFFPSYGVMRACVEHWRNT---GTPSIWERICASKHAVVEPSGKEEFREAFKEFNDALE 592
Query: 580 DT------STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKV 625
T +GA FFAVCRGKVSEG+DFAD AGR VV+TG+P+A D KV
Sbjct: 593 ATPGGGAGGRNGAAFFAVCRGKVSEGIDFADKAGRCVVLTGIPYAPKADAKV 644
>gi|347964194|ref|XP_311162.5| AGAP000634-PA [Anopheles gambiae str. PEST]
gi|387912925|sp|Q7QEI1.5|RTEL1_ANOGA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|333467418|gb|EAA06834.5| AGAP000634-PA [Anopheles gambiae str. PEST]
Length = 991
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 307/778 (39%), Positives = 455/778 (58%), Gaps = 80/778 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
MP Y I GI V FPFE Y+ Q YM KVI+ LQNK N +LESPTGTGKTL LLC+++AW
Sbjct: 1 MPEYMINGIPVNFPFEPYELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAWL 60
Query: 60 --------RKSLGSFSTLGS--QVNNQ----ISGSQSSVNSSQSGDSKLPTILYTSRTHS 105
+ + + TL +++N + Q+ Q ++K+ I+Y SRTHS
Sbjct: 61 LHMKSKQPKHRMETIDTLPEPPELSNAKHAALDPEQALALQQQKANAKM-KIIYASRTHS 119
Query: 106 QLRQVIQELKTSNYR-PKMVILGSREQLCIHREVSLLRGSAQNNACR-FLCKKGTN-RRC 162
QL Q +QELK ++Y + +ILGSR+QLCIH ++S +NNA + LC++ R C
Sbjct: 120 QLSQAMQELKNTSYLFVRSIILGSRDQLCIHPDIS----KQENNAIKTVLCRESVKARNC 175
Query: 163 NHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
+ ++RV + K+ P + P+ DIEDLV +GR CPY++++EL + D++F PYNYL+
Sbjct: 176 SFYNRV-ETAKDRPDVATVPVMDIEDLVTVGRKLKACPYYLSKELVEQADVIFMPYNYLL 234
Query: 222 DPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA----KNCIDIS 277
DP RK G+ +N+++I DEAHN+E +C + S L S + I + K+ +D
Sbjct: 235 DPKARKSNGLSLQNTVIILDEAHNVEKMCEEVGSALLRSSDIALAIEDTSSVIKSMMDGG 294
Query: 278 STRRGQSSDE-TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
G + L D+ +L+ +LL +EK + ++PI + G T PG YI++LL NI
Sbjct: 295 GAWTGDGEKQLELTLDDLVLLKEILLGVEKAVDDIPILFSQGGTTHPGTYIFDLLEKANI 354
Query: 337 TQETAYKLIDIV-EVAAELLQEDKLQNKKSTTACR----IESISNILKIIFRDKG----T 387
+ I++V +V L+ + +K+ R ++S+ + L+++F G
Sbjct: 355 K----FGNINVVLQVMNSLITH--ITTEKTGGFVRRGAGLQSMVDFLEVVFASSGPEYRQ 408
Query: 388 AHSAYYRVH-------------VREADANAADVLKGKA-----SRTLSWWCFNPGIAMQE 429
A +RVH V+ AD A KA S+ +++WCFNPG M++
Sbjct: 409 AVEKCFRVHIEPEEPKQLAKGGVKRADGWTATKQPLKAPVKSTSKVINFWCFNPGFGMRQ 468
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
SIILTSGTL+P+ F EL L + +ENPH+I Q++ ++ GP LN
Sbjct: 469 LVDSGTRSIILTSGTLAPLKPFISELSLPVAVSLENPHIIARSQVYVKVITHGPDRVELN 528
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
SS++NR + EY LG T +++ I+P GLLIFFPSY L+++C W+ + IW
Sbjct: 529 SSFKNRSNPEYIASLGRTALSLCPIIPGGLLIFFPSYPLLNKCSEEWQASG------IWG 582
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
+I + K+ VEPR F + +Y A+++D ++ GA+F AVCRGKVSEGLDFAD GRA
Sbjct: 583 QISRLKQIFVEPRGKDQFTTTMAEYYAQVRDPASRGAIFMAVCRGKVSEGLDFADANGRA 642
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V+ITG+PF M D +V LK++YLD +E +L ++G DWY+ +ASRAVNQA+
Sbjct: 643 VMITGLPFPPMMDARVVLKKQYLDTN------RTRENEL--ITGNDWYSLEASRAVNQAI 694
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ---CYSKFGDVVYTLTRFFR 724
GRVIRH+ DYGAI+ CD RF + +++Q+S WI H++ FG VV ++RFFR
Sbjct: 695 GRVIRHKDDYGAILLCDSRFQNARQQAQLSAWIHSHLRESSAVPNFGTVVGEMSRFFR 752
>gi|432094035|gb|ELK25827.1| Regulator of telomere elongation helicase 1 [Myotis davidii]
Length = 1389
Score = 537 bits (1384), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/810 (37%), Positives = 435/810 (53%), Gaps = 130/810 (16%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKIILSGVTVDFPFQPYKCQEEYMAKVLECLQKKVNGVLESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGDS-----KLPTILYTSRTHSQLR 108
+ L + ++ + G S N++ GD+ +P ++Y SRTHSQL
Sbjct: 61 EHLRD-AISARKIAERTQGDLFLDRPLSSWGNAASEGDATACYADIPKVIYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRP++ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 120 QVIGELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYNN 176
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID------ 222
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D
Sbjct: 177 VEEKSLEQDLATPILDIEDLVKSGNRHKLCPYYLSRNLKQQADIIFMPYNYLLDAKGHRL 236
Query: 223 ---------------PWF-------------------------RKGLGVEWKNSILIFDE 242
PW R+ G++ K +++IFDE
Sbjct: 237 TLPCVQRLVLHVVEAPWMCPVLQHRLGPRNHADSALCQAQVSSRRAHGIDLKGTVVIFDE 296
Query: 243 AHNLEGICADAASFDLS-----SGL--LTACISEAKNCIDISSTRRGQSSDET----LNP 291
AHN+E +C ++ASFDL+ SGL L + E R S+D +
Sbjct: 297 AHNVEKMCEESASFDLTPHDVASGLDVLDQILEEQSRAAQQGELRLEFSADANSGLNMEL 356
Query: 292 DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA 351
++ A L+ +LL+LE I V + + G TKPG YI+EL A+ IT +T +++ ++
Sbjct: 357 EDIAKLKMILLRLEGAIDAVELPGGDGGVTKPGSYIFELFAEAQITLQTKGCILESLD-- 414
Query: 352 AELLQEDKLQNKKSTTACRIESISNILKIIFRDK--------GTAHSAYYRVHVR----- 398
+++Q + T ++ +++I++++F G S Y+VH+
Sbjct: 415 -QIIQHLAGRAGLFTHTAGLQKLADIIQMVFSTDPAEGSSPVGPEASLSYKVHIHPDTSH 473
Query: 399 EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQE 454
A+ +D ASR LS+WCF+PG M+E R V +++LTSGTL+P+ SFA E
Sbjct: 474 RGTAHRSDAWSSTASRRQGKVLSYWCFSPGCCMRELVRQGVRTLLLTSGTLAPVSSFALE 533
Query: 455 LKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
+++ FP+ +ENPHVI QIW GIVP GP G L+S++ R S E LG +VNI R+
Sbjct: 534 MQIPFPVCLENPHVIDKHQIWVGIVPRGPDGAQLSSAFDKRFSDECLSSLGKALVNITRV 593
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
VP GLL+FFPSY ++++ + W+ + Y
Sbjct: 594 VPHGLLVFFPSYPVLEKSLEFWR--------------------------------VMGAY 621
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
A + + GA F AVCRGK SEGLDFAD GR VV+TG+P+ DP+V LK ++LD
Sbjct: 622 YAAVASPGSRGAAFLAVCRGKASEGLDFADVNGRGVVVTGLPYPPRKDPRVILKMQFLDE 681
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
G + FLSG+DWY QQASRA+NQA+GRVIRHRHDYGAI CD RF
Sbjct: 682 MKGRSGASGQ-----FLSGQDWYRQQASRAMNQAIGRVIRHRHDYGAIFLCDHRFTSADT 736
Query: 695 KSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
++Q+ W++PH+Q Y+ FG V+ + +FFR
Sbjct: 737 RAQLPSWVRPHVQVYNHFGHVIRDVAQFFR 766
>gi|345490538|ref|XP_001606129.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Nasonia vitripennis]
Length = 1111
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 299/771 (38%), Positives = 450/771 (58%), Gaps = 69/771 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + G+ ++FPF+ Y Q YM+KVI+ LQ N +LESPTGTGKTL LLC++L W
Sbjct: 1 MTEVTLNGVVIKFPFKPYQVQEDYMKKVIECLQEGKNGVLESPTGTGKTLSLLCSSLGWL 60
Query: 61 -----------KSLGSFSTLGS------QVNNQIS-GSQSSVNSSQSGDS--KLPTILYT 100
+SLG+ +GS Q + G S N + + +P I+Y
Sbjct: 61 MIKKAQIQIQVQSLGALDQVGSGNSYLDQFAKSLDKGGGKSTNQAPTNTFGWSMPKIIYA 120
Query: 101 SRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRF-LCK-KG 157
SRTHSQL Q +QELK ++YR + +LGSR+QLCIH EV+ QN + + +C+ K
Sbjct: 121 SRTHSQLSQAMQELKRTSYRHVSVTVLGSRDQLCIHPEVA----KEQNTSNKIHMCQAKI 176
Query: 158 TNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPY 217
R C +++ V + K++P + D +DIEDLV G+ CPYF+++EL++ DI+F PY
Sbjct: 177 KARNCFYYNNV-ELRKDDPTIKDNILDIEDLVKTGQKLKCCPYFLSKELKQNADIIFMPY 235
Query: 218 NYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI-DI 276
NYL+DP RK G+E +N++++ DEAHN+E +C DAAS +SS + CI E + + D+
Sbjct: 236 NYLLDPKTRKNQGIELQNNVVLLDEAHNVEKMCEDAASLQISSTDIAVCIDEITHVMKDM 295
Query: 277 SSTRRGQ--------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIY 328
++ Q ++ + + ++ IL+A+ L+LEK I + I ++ G T PG YI+
Sbjct: 296 ANETNDQDFLSEGSNAAQKDFSAEDLCILKAMFLELEKAIDSIQITKRDEGDTYPGGYIF 355
Query: 329 ELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTA 388
E+L +ITQ +ID ++ L + + ++ S++L+++F G+
Sbjct: 356 EILEKADITQGKELLVIDKLDKIVTYLTTVSASSF-TRKGNALQKFSDLLRVVF--AGST 412
Query: 389 HSAY-------YRVHVR--------EADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL 433
++ Y Y+V+++ + DA + + +S+WCF+PG MQ+
Sbjct: 413 NNRYREKIKQCYKVYIQAEPAKKSFKNDAWETKKITKTDGKLISYWCFSPGFGMQQLLDQ 472
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
V S+ILTSGTLSP+ F E+ + ++ENPH++++KQI GI+ G G LNSSY
Sbjct: 473 GVRSVILTSGTLSPLKPFISEIGIEIGAQLENPHIVSNKQICVGIISNGYDGCSLNSSYN 532
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ +Y LG TI ++ I+P G+LIFFPSY +M +C W+ W +I
Sbjct: 533 TRNDPKYIASLGETIKILSCILPHGMLIFFPSYPIMKKCQEEWQKMGK------WSQIEA 586
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
K VEP+ F + +Y K+ D + GA+F AVCRGKVSEGLDFA+ GRAV+IT
Sbjct: 587 SKPIFVEPQSKEGFNNVMTEYYKKIHDPAHKGAIFMAVCRGKVSEGLDFANANGRAVLIT 646
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+PF + DP++ LK+ YL+ + ++ G E LSG+ WY +ASRAVNQA+GR+I
Sbjct: 647 GLPFPPLKDPRIILKQRYLE-ENRASGKES-------LSGQQWYQLEASRAVNQAIGRII 698
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RH++DYGAI+ CD RF +PS K +S WI+PHI+ + F VV L FFR
Sbjct: 699 RHKNDYGAILLCDCRFDNPSFKQHLSSWIRPHIKKFQDFRMVVKELREFFR 749
>gi|195470104|ref|XP_002099973.1| GE16425 [Drosophila yakuba]
gi|229891631|sp|B4PZB4.1|RTEL1_DROYA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194187497|gb|EDX01081.1| GE16425 [Drosophila yakuba]
Length = 985
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 307/787 (39%), Positives = 442/787 (56%), Gaps = 81/787 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE Y Q YMEKVIQ L++ N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MPESLIAGIPVHFPFEPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 61 KSLGSFS------------TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
++ S T S+ + ++ + +P ++Y SRTHSQL
Sbjct: 61 RTRQSEHQQQMVKMEKADFTGLGGGAAGGDLSELAKTMGRANNWGVPKVIYASRTHSQLT 120
Query: 109 QVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRG-SAQNNACRFLCKKGTNRRCNHHS 166
Q ++ELK + Y + V+LGSR+QLCIH EV +G S + N C+ T C+
Sbjct: 121 QAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKT---CSFQM 177
Query: 167 RVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
RV + K++P L G +DIEDLV +G+ CPYF +REL DI F PYNYL+DP
Sbjct: 178 RV-ESRKDHPDLRGPSIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKA 236
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSS 285
RK +E N+I+I DEAHN+E IC ++AS + S + I + + + + ++ G+S
Sbjct: 237 RKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIMQVFAS--GESQ 294
Query: 286 D------ETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQE 339
D + D+ +L+ +LL+ EK I V + + G T P +YELL N T
Sbjct: 295 DMGGDEPKDFTLDDLTLLKEMLLEFEKAIDAVVVENAVEGTTFPASMMYELLGKANFTYG 354
Query: 340 TAYKLIDIVE--VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHS---AYYR 394
++ +++ V L+ ++ +K T +S++L I+F +K S A ++
Sbjct: 355 NVATIVSLLDKLVQYLLVASQQMTIRKGGT---FTMLSDLLTIVFANKEDVMSKVYASFK 411
Query: 395 VHVREADAN---------------------AADVLKGKASRTLSWWCFNPGIAMQEFSRL 433
VHV+ + AA K ++ +++WCFNPG M++
Sbjct: 412 VHVQLEEVKQGHGKQQGGKQHGGWLGKGTIAAATGSIKVAKIINFWCFNPGFGMEQLLNT 471
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+V S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S+Y
Sbjct: 472 QVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNYA 531
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
NRD+ +Y LG TI+N++RIVPDGLL+FFPSY ++++C+ W+ + +W I
Sbjct: 532 NRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQASG------LWADISV 585
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
K +EPR F +E++ ++D + GAVF AVCRGKVSEGLDFAD GRAV+IT
Sbjct: 586 KKPIFLEPRSKDQFTSTMEEFYQAIRD--SKGAVFMAVCRGKVSEGLDFADRNGRAVIIT 643
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+PF + DPKV LKR YL + +E +L LSG++WYN A+RAVNQA+GRVI
Sbjct: 644 GLPFPPLKDPKVILKRRYL------EANRTRENQL--LSGQEWYNLDATRAVNQAIGRVI 695
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI----QCYSKFGDVVYTLTRFFREERIC 729
RHR+DYGAI+ CD RF S+ Q+S WI+ H+ QC S FG +V L +FF+
Sbjct: 696 RHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDRPQC-SPFGPIVRELRQFFKN---- 750
Query: 730 GSTNLKL 736
N+KL
Sbjct: 751 AEANMKL 757
>gi|219110231|ref|XP_002176867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411402|gb|EEC51330.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 791
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 294/757 (38%), Positives = 430/757 (56%), Gaps = 51/757 (6%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
T +RG+ V FPF Y CQ YMEKV+ +L NALLESPTGTGKTLCLLC+TLAW++
Sbjct: 38 TVDVRGVRVHFPFRPYKCQETYMEKVLDALLRSENALLESPTGTGKTLCLLCSTLAWQRE 97
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK 122
S++ N + ++ + + +++PTI+Y SRTHSQL QV++EL+ + YRP+
Sbjct: 98 QSRLLQQASELQNTDASLLANSQDAPARAARVPTIIYASRTHSQLSQVVRELRNTRYRPQ 157
Query: 123 MVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM---KNNPHLG 179
+LGSR+Q+C++ +V +G + + K G +R+C + + + N
Sbjct: 158 HAVLGSRDQMCVNPKVK-KQGCSATDVNHDCSKLGKDRKCRFRNNLDGFTAPANENSGTN 216
Query: 180 DEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL--GVEWKNS 236
+P+ D+EDLV +G++ CP++ TR L +++ PYNYL D R + W N+
Sbjct: 217 TQPVMDMEDLVTMGKSHKVCPFYYTRALVAKAELILVPYNYLFDKDARATTLSDIPWDNA 276
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
+LIFDEAHNLE +++ASFDLS+ ++ CI+E + + S+ L +N
Sbjct: 277 VLIFDEAHNLESFASESASFDLSNTDISGCIAEVQKAGNYLQAMPDLGSN--LKEENLVK 334
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL-----NITQETAYKLIDIVEVA 351
L+A+ LKLE + +G Y E + D + I+ +
Sbjct: 335 LKAIFLKLEDYL---------MGLGNQTAYTGEFMMDFFQQGGGVNHSNHEIFIEELRKV 385
Query: 352 AELLQEDKLQNKKSTTACRIESISNILKIIFRDK----GTAHSAYYRVHVREADANAADV 407
+LL D + + ++E LK +F +K A SA YRVHV + +
Sbjct: 386 NDLLL-DMRGTGATKGSPKLEHFVQCLKRVFGEKLESRCLAKSASYRVHVSPKEQRQS-- 442
Query: 408 LKGK---ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE 464
GK ASRT+S+WCF P +AM+E + L V SII+TSGTLSP+ S++ EL LNFP +E
Sbjct: 443 --GKQHIASRTVSYWCFAPALAMEELASLNVRSIIVTSGTLSPLPSYSMELGLNFPHTLE 500
Query: 465 NPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
NPH+++ QI ++ G SG L SSY R EY ELGNT+V ++++ P G+L+FFP
Sbjct: 501 NPHIVSDNQIHVRVIGKGVSGKELTSSYERRKDGEYYSELGNTLVALSKVTPAGMLVFFP 560
Query: 525 SYYLMDQCIACWK----NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD 580
SY +M+ CI W N + + T W+R+ K VVEP+ S+ P AI D+ L
Sbjct: 561 SYSVMETCIERWGGPSLNYNIKSPKTPWKRLLSTKSVVVEPKSSANLPEAIADFHRFLGM 620
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD------- 633
+ G + VCRGK+SEG+DFA+ RAVVITG+PF D KV+LKR++LD
Sbjct: 621 LKSPGCILMGVCRGKISEGIDFANEQSRAVVITGLPFPPSFDAKVKLKRDFLDGARAIGS 680
Query: 634 LQAQSQGG-----EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
++A + GG + LSG DWY QQA RAVNQA+GRVIR+R DYGA++ D R
Sbjct: 681 MKASNVGGFADNASSTSNLATKLSGHDWYAQQAHRAVNQAIGRVIRNRSDYGAVLLLDSR 740
Query: 689 FAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
F+ + +S W++PH++ FG V L +F+RE
Sbjct: 741 FSQQRNQEGLSKWVRPHLKKDEGFGTAVGALAKFYRE 777
>gi|444517021|gb|ELV11342.1| Regulator of telomere elongation helicase 1 [Tupaia chinensis]
Length = 1288
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 305/818 (37%), Positives = 443/818 (54%), Gaps = 112/818 (13%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K + LLESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPRITLGGVVVDFPFQPYKCQEQYMTKVLECLQKKVHGLLESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGD------------SKLPTILYTSRTHSQLR 108
+ L S ++ ++ G S + G+ S +P ILY SRTHSQL
Sbjct: 61 EHLRD-SISARKIAERVPGELFSDQALSWGNAVAVDGDPIACYSDIPKILYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS------------------------ 144
QVI EL++++YRPK+ +LGSREQLCIH EV S
Sbjct: 120 QVIGELRSTSYRPKVCVLGSREQLCIHPEVKRQESSHVQVRTLPWVPAGGVHLRQEWQVR 179
Query: 145 ----------AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRT 194
Q + CR +K +R C+ ++ V ++ + L +DIEDLV G
Sbjct: 180 LHSSLVLAFLLQIHLCR---RKVASRSCHFYNNVEEWSQEQ-ELSSPILDIEDLVRSGSQ 235
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+++R ++ D++F PYNYL+DP R+ G++ K +++I DEAHN+E +C ++A
Sbjct: 236 HRVCPYYLSRNRKQQADLIFMPYNYLLDPKSRRAHGIDLKGTVVILDEAHNVEKMCEESA 295
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
SFDL+ + + + ++ T+ Q S+ A A+LL+LE I V +
Sbjct: 296 SFDLTPHDVASGLDALDQVLE-EQTKLAQRSESHPELSTDATNSAILLRLEAAIDAVELP 354
Query: 315 SKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTT------- 367
G TKPG YI+EL A+ IT +T ++D ++ + L +Q T
Sbjct: 355 GDRGGVTKPGSYIFELFAEAQITFQTKDCILDSLDQVIQHLAGRNVQLGPGATPPLLCCG 414
Query: 368 -------------ACRIESISNILKIIFR------DKGTAHSAYYRVHVREADANAADVL 408
++ +++IL+ +F G+ + A +A +
Sbjct: 415 PSSCPTGAGVLTNTAGLQRLTDILQTVFSVDPPDSSPGSGGGPEALQPYKLVAAGSAGAM 474
Query: 409 KGKA----------SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN 458
+ +A + LS+WCF+PG +M+E R V ++ILTSGTL+P+ SFA E+++
Sbjct: 475 RVRAQWPSPTLTPTGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPVSSFALEMQVP 534
Query: 459 FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR-----------DSIEYKQELGNT 507
FP+ +ENPHVI QIW G+VP GP G L+S++ R D +L
Sbjct: 535 FPVCLENPHVIDKHQIWVGVVPKGPDGAQLSSAFDKRTEQPPLPGAGGDWGTRCGDLAAF 594
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLF 567
NIAR+VP GLL+FFPSY +M++ + W+ +LT R+ K VEPR F
Sbjct: 595 AGNIARVVPHGLLVFFPSYPVMEKSLEFWRAR---DLT---RRVEVQKPLFVEPRSKGSF 648
Query: 568 PLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRL 627
++ Y ++ +SGA F AVCRGK SEGLDF+D GR V++TG+P+ DP+V L
Sbjct: 649 SEVLDAYYKRVAAPGSSGATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVL 708
Query: 628 KREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCD 686
K ++LD ++A+S G LSG+DWY QASRAVNQAVGRVIRHRHDYGAI CD
Sbjct: 709 KMQFLDEMKARSGAGG------RCLSGQDWYRMQASRAVNQAVGRVIRHRHDYGAIFLCD 762
Query: 687 ERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RFAH ++Q+ W++P+++ Y FG V+ + +FFR
Sbjct: 763 HRFAHADARAQLPSWVRPYVKVYDSFGHVIRDVAQFFR 800
>gi|47212324|emb|CAF91262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1212
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 306/818 (37%), Positives = 455/818 (55%), Gaps = 107/818 (13%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M T + G+ V+FPF Y CQ YM KVI+ L+ K N +LESPTGTGKTLCLLC+ LAWR
Sbjct: 1 MTTLALDGVTVQFPFAPYACQREYMRKVIECLEQKTNGVLESPTGTGKTLCLLCSALAWR 60
Query: 61 KSLGSFST-------LGSQVNNQISGSQSSVNSSQSGD----SKLPTILYTSRTHSQLRQ 109
+ L + LG + ++ +G S +++ G+ + +P I+Y SRTHSQL Q
Sbjct: 61 EQLKDKISSKMMERRLGGETSHS-TGLASWGSAAADGEAAYYTDIPKIIYASRTHSQLAQ 119
Query: 110 VIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVA 169
VI+ELK + YRPK+ +LGSREQLCI+ EV +R + + KK + R C ++
Sbjct: 120 VIKELKNTAYRPKICVLGSREQLCINPEV--MRQESSHVKVHMCRKKVSTRSCPFYNNTE 177
Query: 170 DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL 229
+ + L +D+EDLV G CPY+++R L++ D++F PYNYL+DP R+
Sbjct: 178 ESSTDR-DLTHSILDVEDLVKFGNKKRVCPYYLSRSLKQEADVIFMPYNYLVDPKSRRAH 236
Query: 230 GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI--DISSTRRGQS--S 285
+E +++IFDEAHNLE C ++ SFDL+ + + I+ + + +T G +
Sbjct: 237 NIELNGAVVIFDEAHNLEKTCEESTSFDLTPYEVASAIAAVDRLLVEQVKATGAGGTLAE 296
Query: 286 DETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLI 345
D +L+ D+ +LL LE I ++S E G TKPG +IYELL ++T ++ ++
Sbjct: 297 DGSLDYDS-----EILLDLEAAIDSFDVSS-EKGLTKPGMFIYELLQRAHLTYQSKAEVY 350
Query: 346 DIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGT-----AHSAYYRVHVREA 400
+ +E + L Q + I+ +++I++++F + + +A+++VH+ +
Sbjct: 351 EALEQISGYLAA---QPGIFLQSGGIQKLADIIQLVFCGDPSEKDVRSSAAHFKVHIHQD 407
Query: 401 DAN-----AADV-------LKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPM 448
++ AD+ KA LS+WCF+PG +MQ+ V +ILTSGTLSP+
Sbjct: 408 TSHNRKKQTADIWASSSSSSSSKAGNILSYWCFSPGFSMQDLVNQGVRCVILTSGTLSPL 467
Query: 449 DSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI---------- 498
DSF E++++FP+R+EN HVI QI+ +V GP G L+S++ R +
Sbjct: 468 DSFTSEMRIDFPVRLENGHVIERDQIFVSVVDRGPDGVQLSSAFDRRFLLHPDMLHLTGS 527
Query: 499 -----------------EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH 541
E LGNT+ N++R+VP GLL+FFPS+ LM++ + W+ +
Sbjct: 528 QAQLRSLSLFFCGRFLPENMASLGNTVANLSRVVPHGLLVFFPSFPLMEKVLDFWRVSGD 587
Query: 542 GNLTTIW---------------ERICKHKKPVVEPR-------------QSSLFPLA--I 571
G W ERI K VEP+ SLF ++ +
Sbjct: 588 GGSPASWCESSSPLAPQAHGHAERIDALKPIFVEPKGKANFSEASGRAETDSLFSISQVM 647
Query: 572 EDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY 631
+ Y K+ D T G FFAVCRGK SEGLDFAD GRAVVITG+PF DP+V LK ++
Sbjct: 648 DGYYNKVNDPQTKGGSFFAVCRGKASEGLDFADAFGRAVVITGLPFPPRMDPRVILKMQF 707
Query: 632 LDLQAQSQGGEYK-----ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCD 686
LD S+ + K + FLSG+ WY QQA RAVNQAVGRVIRHRHD+GAI CD
Sbjct: 708 LDEMNASKTSKMKPAVAFRVLVQFLSGQQWYRQQAFRAVNQAVGRVIRHRHDFGAIFLCD 767
Query: 687 ERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
RF +P ++Q+ W++P + FG V+ +++FFR
Sbjct: 768 HRFKNPEARAQLPSWLKPCVHLCDSFGSVIRDVSKFFR 805
>gi|350414537|ref|XP_003490348.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Bombus impatiens]
Length = 980
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/768 (39%), Positives = 432/768 (56%), Gaps = 65/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLC------ 54
MP I + V FPF+ Y Q YM KVI+ LQN N +LESPTGTGKTL LLC
Sbjct: 1 MPDVTINNVIVNFPFKPYSIQEEYMVKVIECLQNGKNGVLESPTGTGKTLSLLCSSLSWL 60
Query: 55 ----ATLAWRKSLGSFST--LGSQVNNQISGSQSSVNSSQSGDSKL----PTILYTSRTH 104
A L + +G+ G Q+S S L P I+Y SRTH
Sbjct: 61 LTKKAQLQAQSLIGAIEKPDFGGHFFKQLSNGLKEGTGDSKPTSNLGWAPPKIIYASRTH 120
Query: 105 SQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCN 163
SQL Q +QELK ++Y+ +LGSR+QLCIH EVS + ++ +N K +R C
Sbjct: 121 SQLSQAMQELKRTSYKHVSTAVLGSRDQLCIHPEVS--KETSSSNKIYMCHSKIKSRTCF 178
Query: 164 HHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
+++ V + K++P E +DIEDLV G+ F CPYF++REL++ DI F PYNYL+D
Sbjct: 179 YYNNV-ESRKDDPLFKQEVLDIEDLVKAGQKFKCCPYFLSRELKQNADITFMPYNYLLDS 237
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ 283
RK G++ +N+I++ DEAHN+E C +AAS + S + CI E ++ ++ Q
Sbjct: 238 KSRKTQGIDIQNNIILLDEAHNIEKTCEEAASLQICSTDIAMCIDEITAVMEDMASNVEQ 297
Query: 284 SSD----------ETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLAD 333
+D + D+ IL+A+ L+LEK I + I ++ G T PG YI+ELL
Sbjct: 298 ENDFSMENSGNTVKDFTADDLCILKAMFLELEKAIDAIEILNRNEGDTFPGGYIFELLGK 357
Query: 334 LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYY 393
+T +I+ +E A L + + ++ S++LK +F + +S Y
Sbjct: 358 AQLTHGREQLVIEKLEKIAFYLTTTS-TSPFTRKGHALQKFSDLLKTVF---SSGNSPRY 413
Query: 394 RVHVREADA-----------------NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
R +++ +LK S+ +S+WCF+PG +MQ+ V
Sbjct: 414 REKIKQCYKVYIQLEEQKKTKQNEVWETKKILKKNESKVISYWCFSPGFSMQQLMDQGVR 473
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
SIILTSGTLSP+ F EL + L++ENPH++ QI G++ GP GY LNSS+ R+
Sbjct: 474 SIILTSGTLSPLKPFISELGIPIELQLENPHIVKGDQICVGVLSQGPDGYSLNSSFNTRN 533
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
+Y LG T++N + I+P GLL+FFPSY +M +C W+ T +W +I K
Sbjct: 534 DPKYIASLGRTVLNFSCIIPHGLLVFFPSYPIMKKCKEEWQTTG------LWTKIADRKP 587
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
VEP+ F + +Y K+KD S GA+F AVCRGKVSEGLDFA+ GRAV+ITG+P
Sbjct: 588 IYVEPQYRDGFINVMNEYYEKIKDPSCKGAIFMAVCRGKVSEGLDFANANGRAVLITGLP 647
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
F + DP+V LK+ YL+ E K+ LSG+ WY +ASRAVNQA+GR+IRH+
Sbjct: 648 FPPLKDPRVILKQRYLE--------EMKKQNKEALSGQQWYQLEASRAVNQAIGRIIRHK 699
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+DYGAII CD RF +PS K +S W++PHI+ ++ FG ++ L FFR
Sbjct: 700 NDYGAIILCDCRFDNPSFKKHLSAWLRPHIKNFTSFGIIMKELKDFFR 747
>gi|340715420|ref|XP_003396211.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Bombus terrestris]
Length = 996
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 300/765 (39%), Positives = 431/765 (56%), Gaps = 59/765 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLC------ 54
MP I + V FPF+ Y Q YM KVI+ LQN N +LESPTGTGKTL LLC
Sbjct: 1 MPDVTINNVIVNFPFKPYSIQEEYMVKVIECLQNGKNGVLESPTGTGKTLSLLCSSLSWL 60
Query: 55 ----ATLAWRKSLGSFST--LGSQVNNQISGSQSSVNSSQSGDSKL----PTILYTSRTH 104
A L + +G+ G Q+S S L P I+Y SRTH
Sbjct: 61 LTKKAQLQAQSLIGAIEKPDFGGHFFKQLSNGLKEGTGDSEPTSNLGWAPPKIIYASRTH 120
Query: 105 SQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCN 163
SQL Q +QELK ++Y+ +LGSR+QLCIH EVS + ++ +N K +R C
Sbjct: 121 SQLSQAMQELKRTSYKHVSTAVLGSRDQLCIHPEVS--KETSSSNKIYMCHSKIKSRTCF 178
Query: 164 HHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
+++ V + K++P E +DIEDLV +G+ F CPYF++REL++ DI F PYNYL+D
Sbjct: 179 YYNNV-ESRKDDPLFKQEVLDIEDLVKVGQKFKCCPYFLSRELKQNADITFMPYNYLLDS 237
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ 283
RK G++ +N+I++ DEAHN+E C +AAS + S + CI E ++ ++ Q
Sbjct: 238 KSRKTQGIDIQNNIILLDEAHNIEKTCEEAASLQICSTDIAMCIDEITAVMEDMASNIEQ 297
Query: 284 SSD----------ETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLAD 333
+D + D+ IL+A+ L+LEK I + I + G T PG YI+ELL
Sbjct: 298 ENDFSMENSGNIVKDFTADDLCILKAMFLELEKAIDAIEILKRNEGDTFPGGYIFELLGK 357
Query: 334 LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAH---- 389
+T +I+ +E A L + + ++ S++LK +F +
Sbjct: 358 AQLTHGREQLVIEKLEKIAFYLTTTS-TSPFTRKGHALQKFSDLLKTVFSSGDSPRYREK 416
Query: 390 -SAYYRVHVREADAN---------AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSII 439
Y+V+++ + +LK + +S+WCF+PG +MQ+ V SII
Sbjct: 417 IKQCYKVYIQLEEQKKXKQNEVWETKKILKKNEGKVISYWCFSPGFSMQQLMDQGVRSII 476
Query: 440 LTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIE 499
LTSGTLSP+ F EL + L++ENPH++ QI G++ GP GY LNSS+ R+ +
Sbjct: 477 LTSGTLSPLKPFISELGIPIELQLENPHIVKGDQICVGVLSQGPDGYSLNSSFNTRNDPK 536
Query: 500 YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV 559
Y LG T++N + I+P GLL+FFPSY +M +C W+ T +W +I K V
Sbjct: 537 YIASLGRTVLNFSCIIPYGLLVFFPSYPIMKKCKEEWQTTG------LWTKIADRKPIYV 590
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
EP+ F + +Y K+KD S GA+F AVCRGKVSEGLDFA+ GRAV+ITG+PF
Sbjct: 591 EPQYRDGFINVMNEYYEKIKDPSCKGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPP 650
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ DP+V LK+ YL+ E K+ LSG+ WY +ASRAVNQA+GR+IRH++DY
Sbjct: 651 LKDPRVILKQRYLE--------EMKKQNKEALSGQQWYQLEASRAVNQAIGRIIRHKNDY 702
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
GAII CD RF +P+ K +S W++PHI+ ++ FG ++ L FFR
Sbjct: 703 GAIILCDCRFDNPNFKKHLSAWLRPHIKNFTSFGIIMKELKDFFR 747
>gi|194764312|ref|XP_001964274.1| GF20802 [Drosophila ananassae]
gi|229891621|sp|B3MSG8.1|RTEL1_DROAN RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190619199|gb|EDV34723.1| GF20802 [Drosophila ananassae]
Length = 994
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 307/796 (38%), Positives = 442/796 (55%), Gaps = 78/796 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE Y Q YMEKVIQ L++ N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MPESLIAGIPVHFPFEPYPVQRAYMEKVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 61 KSLGS------------FSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
++ S LG S + ++ + +P ++Y SRTHSQL
Sbjct: 61 RTRQSEHQQQMIKLDKGADLLGGGAGGGPELSDLAKTMGKANNWGVPKVIYASRTHSQLT 120
Query: 109 QVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNHHS 166
Q ++ELK + Y + V+LGSR+QLCIH EVS G++ N C+ T C
Sbjct: 121 QAMRELKRTAYSNMRSVVLGSRDQLCIHPEVSREVGNSNKVNMCKLRVHSKT---CTFQL 177
Query: 167 RVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
RV + K++P G +DIEDL+ +G+ CPY+ ++EL DI F PYNYL+DP
Sbjct: 178 RV-ESKKDHPDFRGPSIMDIEDLIKVGQKLKMCPYYASKELVPQADITFMPYNYLLDPKA 236
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI--SSTRRGQ 283
RK +E N+I+I DEAHN+E IC ++AS + S + I + + + S + +
Sbjct: 237 RKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAIAIEDVTHIMKAFASDSPQDM 296
Query: 284 SSDE--TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETA 341
+ DE D+ +L+ +LL LEK I V +++ G T P IYELL N T
Sbjct: 297 AGDEPKDFTIDDLMLLKEMLLDLEKAIDAVAVDNPIDGATYPASMIYELLGKANFTYGNV 356
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK----GTAHSAYYRVHV 397
++ +++ + L Q +S++L I+F +K G H A ++VHV
Sbjct: 357 ATIVALLDKLVQYLMVASQQQMSLRKGGSFTLLSDLLTIVFANKESVMGKVH-ASFKVHV 415
Query: 398 ----------READANAA----------DVLKGKASRTLSWWCFNPGIAMQEFSRLEVGS 437
++A A A + GK ++ +++WCFNPG M++ +V S
Sbjct: 416 QVEESKQPQGKQAPAKQAGGWLSKASLTNGSTGKVAKIINFWCFNPGFGMEQLLNTQVRS 475
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S+Y NRD+
Sbjct: 476 VILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQPLISNYTNRDN 535
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
+Y LG TI+N++R+VPDGLL+FFPSY ++++C+ W+ + +W I K
Sbjct: 536 PKYISSLGQTILNVSRLVPDGLLVFFPSYPMLNKCVDAWQASG------LWADIASKKPI 589
Query: 558 VVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
+EPR F +E++ ++D + GA F AVCRGKVSEGLDFAD GRAV+ITG+PF
Sbjct: 590 FLEPRGKDQFTSTMEEFYQAIRD--SKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPF 647
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
+ DPKV LKR YL + +E +L LSG +WYN +A+RAVNQA+GRVIRHR+
Sbjct: 648 PPLKDPKVILKRRYL------ESNRTRENQL--LSGNEWYNLEATRAVNQAIGRVIRHRN 699
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHI----QCYSKFGDVVYTLTRFFR--------- 724
DYGAI+ CD RF ++ Q+S WI+ H+ QC S FG +V L +FF+
Sbjct: 700 DYGAILLCDSRFKDAAQVQQLSKWIRGHLGDRPQC-SPFGPIVRELRQFFKNAETTMKQP 758
Query: 725 EERICGSTNLKLIKTE 740
+ER G+ +IK E
Sbjct: 759 DERESGAPLETVIKKE 774
>gi|297259357|ref|XP_001113864.2| PREDICTED: regulator of telomere elongation helicase 1-like [Macaca
mulatta]
Length = 1347
Score = 527 bits (1358), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/811 (38%), Positives = 442/811 (54%), Gaps = 102/811 (12%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ ++FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTIDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLG---SFSTLGSQVNNQISGSQ---SSVNSSQSGD------SKLPTILYTSRTHSQLR 108
+ L S + +V ++ +Q S N++ + + + +P I+Y SRTHSQL
Sbjct: 61 EHLRDTISARKIAERVQGELFPNQALSSWGNAAAAAEDPIACYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRPK+ +LGSREQLCIH EV + N+ LC+K R H
Sbjct: 121 QVINELRNTSYRPKVCVLGSREQLCIHPEV---KKQESNHMQIHLCRKKVASRSCHFYNN 177
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DIVF PYNYL+D R+
Sbjct: 178 VEEKGLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIVFMPYNYLLDAKSRRA 237
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--LTACISEAKNCIDISSTRR 281
++ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E + +
Sbjct: 238 HSIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKTVQLGEPHP 297
Query: 282 GQSSDE-----TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK-------------P 323
S+D + ++ A L+ +LL+LE I V + + G TK P
Sbjct: 298 EFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDRGVTKPGSAGVSARHATSP 357
Query: 324 GPYIYELLADL----NITQETAYKLIDIVEVAA------------ELLQEDKLQNKKSTT 367
G ++ A L +I Q A ++ VE+ A L + T
Sbjct: 358 GAGVFTNTAGLQKLADIIQCGALCMLLGVELQAPGRPGTAFFIDVALSGGETWAGTSDAT 417
Query: 368 A--------------CRIESISNILKIIFR----------DKGTAHSAYYRVHVR----- 398
A C + + I+F G Y+VHV
Sbjct: 418 ASVFSVWQLGLERRHCYVSQLLPKSTIVFSVDPSEGSRGSPAGLGPLQSYKVHVHPDAGH 477
Query: 399 EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQE 454
A +D A+R LS+WCF+PG +M+E R V S+ILTSGTL+P+ SFA E
Sbjct: 478 RRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMRELVRQGVRSLILTSGTLAPVSSFALE 537
Query: 455 LKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S E LG + NIAR+
Sbjct: 538 MQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARV 597
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIED 573
VP GLLIFFPSY +M++ + W+ +L E + KP+ VEPR F I
Sbjct: 598 VPYGLLIFFPSYPVMEKSLEFWRAR---DLARKMEAL----KPLFVEPRSKGSFSETISA 650
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y A++ ++GA F AVCRGK SEGLDF+D GR V++TG+P+ DP+V LK ++LD
Sbjct: 651 YYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD 710
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ + QGG + FLSG++WY QQASRAVNQA+GRVIRHR DYGA+ CD RFA
Sbjct: 711 -EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFAD 765
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
++Q+ W++PH++ Y FG V+ + +FFR
Sbjct: 766 ARAQLPSWVRPHVRVYDNFGHVIRDVAQFFR 796
>gi|340374870|ref|XP_003385960.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 717
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 296/705 (41%), Positives = 413/705 (58%), Gaps = 52/705 (7%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I + V FPF Y CQ+ YMEKVI++LQN NA+LESPTGTGKTL LLCATL+WR+ L +
Sbjct: 12 IENVPVSFPFTPYPCQIEYMEKVIKALQNNTNAILESPTGTGKTLSLLCATLSWRQQLPA 71
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGD-SKLPTILYTSRTHSQLRQVIQELKTSNYRPKMV 124
S+ + S G P I+Y SRTHSQL Q I ELK+++YRPK+
Sbjct: 72 PVI-----------SEWDLQSDSKGPLGGRPKIIYASRTHSQLSQAIHELKSTSYRPKVS 120
Query: 125 ILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI 183
I+GSR+QLCI+ EV +A+ +AC K + C +++ V D + + G P
Sbjct: 121 IIGSRDQLCINSEVMSKDSNAEKVHACH---AKVAAKSCTYYNNV-DLKRLSVPEGFIP- 175
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIE+LV +G CPY++ RE++ D++F PYNY++D R G+ N+++I DEA
Sbjct: 176 DIEELVGMGTKNKMCPYYLAREMKTEADLIFMPYNYILDLRTRLVHGINITNTVVILDEA 235
Query: 244 HNLEGICADAASFDLSSGLLTACISEA----KNCIDISSTRRGQSSDETLNP-DNFAILR 298
HN+E +C D++SF+L+S + CI + KN + + + +T N + A L+
Sbjct: 236 HNIERVCEDSSSFELTSTDIAHCIKDIDYLLKNKYEEAKEYLSELDTQTQNTLKDLANLK 295
Query: 299 ALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQED 358
L L LE + ++ + S+ KPG YI+E L IT ET LID A L D
Sbjct: 296 ELFLCLEDSLDKIELKSENNECVKPGSYIFEFLGKAGITTETHVVLIDQCSQAIASLTSD 355
Query: 359 KLQNKKSTTACRIESISNILKIIFRDKGTA-------HSAYYRVHVR--------EADAN 403
+ ++ ST ++ +KI+F A S +YRV+++ ++D
Sbjct: 356 QSLHRTSTN---LQKFLEAIKIVFSGSCPAGMTRERMASLHYRVYIKSDNNKRKKKSDVW 412
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
D R L +WCFNPG AM E R V S+ILTSGTLSP++SF EL+L FP+ +
Sbjct: 413 TTDNNTDDTCRRLCYWCFNPGYAMTELVRQGVRSVILTSGTLSPLESFTSELQLEFPVSL 472
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
+ HVI Q+W G+V GP LNSSY+ R + Y LGNT+VN RI+PDG+L+FF
Sbjct: 473 QGSHVIGKDQVWVGVVSKGPDNVHLNSSYQTRFTPAYMDSLGNTLVNFFRIIPDGVLVFF 532
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST 583
PSY +M+ + WK H N I+ R+ +HK+ EP+ + F + Y K+
Sbjct: 533 PSYVVMETLVTHWK--EHSN---IFMRMEQHKQIFKEPKFKNEFNSVMSAYYEKIGSADK 587
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
G FF VCRGKVSEGLDFAD+ GRAV+ITG+P+ +PKV+LK EYL + +
Sbjct: 588 VGGAFFGVCRGKVSEGLDFADNNGRAVIITGLPYPPFAEPKVQLKMEYL----KDARSNF 643
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
T+L ++ + WYNQQA+RAVNQA+GRVIRH++DYGAII CDER
Sbjct: 644 NRTEL--ITDKQWYNQQATRAVNQAIGRVIRHKNDYGAIILCDER 686
>gi|380013392|ref|XP_003690744.1| PREDICTED: regulator of telomere elongation helicase 1 homolog,
partial [Apis florea]
Length = 970
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 298/765 (38%), Positives = 432/765 (56%), Gaps = 59/765 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLC--------- 51
MP I I V FPF+ Y Q YM KVIQ LQN N +LESPTGTGKTL
Sbjct: 1 MPDVTINNIIVNFPFKPYSIQEEYMAKVIQCLQNSKNGVLESPTGTGKTLSLLCSSLSWL 60
Query: 52 ------LLCATLAWRKSLGSFST-LGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTH 104
L +L + +FS Q+NN + S + + P I+Y SRTH
Sbjct: 61 LSKKAQLQAQSLMNKIEEPNFSGHFFKQLNNGLKKSTGDTEPTIVFNWNAPKIIYASRTH 120
Query: 105 SQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCN 163
SQL Q +QELK ++Y+ +LGSR+QLCIH EVS + + +N K +R C
Sbjct: 121 SQLSQAMQELKRTSYKHVGTAVLGSRDQLCIHPEVS--KETNSSNKIYMCHSKVKSRTCF 178
Query: 164 HHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
+++ V + K++P E +DIEDLV G+ F CPYF++REL++ DI+F PYNY++D
Sbjct: 179 YYNNV-ESRKDDPFFKQEILDIEDLVKAGQKFKCCPYFLSRELKQNADIIFMPYNYILDT 237
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI-----DISS 278
RK G++ +N+I++FDEAHN+E IC + AS +SS + CI E + DI
Sbjct: 238 KSRKIQGIDIQNNIILFDEAHNIEKICEETASLQISSTDIAMCIDEITVVMEDMAKDIEQ 297
Query: 279 -----TRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLAD 333
++ + D+ IL+A+ L+LEK I ++ I ++ G T PG YI+ELL
Sbjct: 298 QNNFLMENSENVQKDFTADDLCILKAMFLELEKAIDDISIVKRDEGDTFPGGYIFELLGK 357
Query: 334 LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSA-- 391
+T +I+ +E L + + ++ S++LK F + S
Sbjct: 358 AQLTHGREQLVIEKLEKIVFYLTTTS-TSPFTRKGNALQKFSDLLKTAFSSDNSLLSKEK 416
Query: 392 ---YYRVHVR---EADANAADVLKGKA------SRTLSWWCFNPGIAMQEFSRLEVGSII 439
YY+V+++ + + DV + K + +++WCF+PG +MQ+ +II
Sbjct: 417 IKQYYKVYIQLEEQKKSKQNDVWEKKKILPKNEGKIINYWCFSPGFSMQQLKDQGTRAII 476
Query: 440 LTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIE 499
LTSGTLSP+ F EL + +++EN H++ QI GI+ GP GY LNSS+ R+ +
Sbjct: 477 LTSGTLSPLKPFISELGIPIEVQLENSHIVKEDQICVGILSRGPDGYSLNSSFNTRNDPK 536
Query: 500 YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV 559
Y LG TI N + +VP GLL+FFPSY +M +C W+NT +W +I K V
Sbjct: 537 YIGSLGQTIFNFSCLVPYGLLVFFPSYPIMKKCKEEWQNTG------LWTKIADRKPIYV 590
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
EP+ F + +Y K+++ S GA+F AVCRGKVSEGLDFA+ GRAV+ITG+PF
Sbjct: 591 EPQYKDGFINVMNEYYEKIRNPSCKGAIFMAVCRGKVSEGLDFANANGRAVLITGLPFPP 650
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ DP+V LK+ YL+ E K+ LSG+ WY +ASRAVNQA+GR+IRH++DY
Sbjct: 651 LKDPRVILKQRYLE--------EIKKQDKEVLSGQQWYQLEASRAVNQAIGRIIRHKNDY 702
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
GAII CD RF +P+ K +S W++PHI+ ++ FG ++ L FFR
Sbjct: 703 GAIILCDHRFDNPNFKKHLSAWLRPHIKNFTCFGVIIKELKGFFR 747
>gi|194888991|ref|XP_001977003.1| GG18780 [Drosophila erecta]
gi|229891622|sp|B3NSW1.1|RTEL1_DROER RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190648652|gb|EDV45930.1| GG18780 [Drosophila erecta]
Length = 985
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 312/789 (39%), Positives = 450/789 (57%), Gaps = 85/789 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE Y Q YMEKVIQ L++ N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MPESLIAGIPVHFPFEPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 61 KSLGS-------------FSTL-GSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQ 106
++ S FS L G ++S ++ ++ + +P ++Y SRTHSQ
Sbjct: 61 RTRQSEHQQQMVKIEKADFSGLAGGATGGELSDLGKTMG--RANNWGVPKVIYASRTHSQ 118
Query: 107 LRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRG-SAQNNACRFLCKKGTNRRCNH 164
L Q ++ELK + Y + V+LGSR+QLCIH EV +G S + N C+ T C
Sbjct: 119 LTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKT---CTF 175
Query: 165 HSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
RV + K++P L G +DIEDLV +G+ CPYF +REL DI F PYNYL+DP
Sbjct: 176 QMRV-ESRKDHPDLRGPSIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDP 234
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ 283
RK +E N+I+I DEAHN+E IC ++AS + S + I + + + + ++ G+
Sbjct: 235 KARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIMQVFAS--GE 292
Query: 284 SSDETLN-PDNFAI-----LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNIT 337
S D + P +F + L+ +LL+LEK I V +++ G T P +YELL N T
Sbjct: 293 SQDMAGDEPKDFTLDDLTLLKEMLLELEKAIDAVVVDNAAEGTTFPASLMYELLGKANFT 352
Query: 338 QETAYKLIDIVE--VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHS---AY 392
++ +++ V L+ ++ +K T +S++L I+F +K S A
Sbjct: 353 YGNVATIVSLLDKLVQYLLVASQQMSIRKGGT---FTMLSDLLTIVFANKQDVMSKVYAS 409
Query: 393 YRVHVREADAN---------------------AADVLKGKASRTLSWWCFNPGIAMQEFS 431
++VHV+ ++ AA K ++ +++WCFNPG M++
Sbjct: 410 FKVHVQMEESKQGHGKQQGAKQQGGWLGKGTIAAASGTSKVAKIINFWCFNPGFGMEQLL 469
Query: 432 RLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
+V S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S+
Sbjct: 470 NTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISN 529
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
Y NRD+ +Y LG TI+N++RIVPDGLL+FFPSY ++++C+ W+ + +W I
Sbjct: 530 YANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQASG------LWADI 583
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
K +EPR F +E++ ++D + GAVF AVCRGKVSEGLDFAD GRAV+
Sbjct: 584 SCKKPIFLEPRSKDQFTSTMEEFYQAIRD--SKGAVFMAVCRGKVSEGLDFADRNGRAVI 641
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
ITG+PF + DPKV LKR YL + +E +L LSG++WYN A+RAVNQA+GR
Sbjct: 642 ITGLPFPPLKDPKVILKRRYL------EANRTRENQL--LSGQEWYNLDATRAVNQAIGR 693
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI----QCYSKFGDVVYTLTRFFREER 727
VIRHR+DYGAI+ CD RF S+ Q+S WI+ H+ QC S FG +V L +FF+
Sbjct: 694 VIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDRPQC-SPFGPIVRELRQFFKN-- 750
Query: 728 ICGSTNLKL 736
N+KL
Sbjct: 751 --AEANMKL 757
>gi|195131929|ref|XP_002010396.1| GI15901 [Drosophila mojavensis]
gi|229891624|sp|B4L1Z2.1|RTEL1_DROMO RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193908846|gb|EDW07713.1| GI15901 [Drosophila mojavensis]
Length = 1014
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 311/821 (37%), Positives = 456/821 (55%), Gaps = 88/821 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE Y+ Q +MEKVI L++ N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MPESIIAGIPVHFPFEPYEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 61 KSLGSFSTLG------SQVNNQISG-------SQSSVNSSQSGDSKLPTILYTSRTHSQL 107
++ S + Q Q +G S ++ ++ + +P ++Y SRTHSQL
Sbjct: 61 RTRQSEHQINMQKLQMEQQQRQATGGSATGAISDLALTMGKANNWGVPKVIYASRTHSQL 120
Query: 108 RQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNHH 165
Q ++ELK + Y + V+LGSR+QLCIH +V +G++ N C+ T C+
Sbjct: 121 TQAMRELKRTAYASMRSVVLGSRDQLCIHPDVMKEQGNSNKVNMCKLKVHAKT---CSFQ 177
Query: 166 SRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
RV + K++P G +DIEDLV +G+ CPY+ ++EL + DI F PYNYL+DP
Sbjct: 178 LRV-ESKKDHPDFRGPSIMDIEDLVKVGQRLKMCPYYASKELVSSADITFMPYNYLLDPK 236
Query: 225 FRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS 284
RK +E N+I+I DEAHN+E IC ++AS + S + I + + + I ++ Q
Sbjct: 237 ARKANKIELSNTIVILDEAHNIEKICEESASVQIRSSDVAMAIEDVTHIMKIFTSADSQD 296
Query: 285 SDETLNPDNFAI-----LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQE 339
S P +F + L+ +LL+LEK I V + ++ G T P +IYELL N T
Sbjct: 297 SGGPEEPKDFTLDDLTLLKEMLLELEKAIDGVVVENQVEGTTYPAAHIYELLGKANFTYG 356
Query: 340 TAYKLIDIVEVAAELL----QEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR- 394
++ +++ + L Q L+ S +S++L ++F +K + +R
Sbjct: 357 NCATIVALLDKLVQYLMVASQHSMLRKGGSFMV-----LSDLLNVVFANKEDIMAKVHRS 411
Query: 395 --VHVREAD--------------------ANAADVLKGKASRTLSWWCFNPGIAMQEFSR 432
VHV+ D N A K ++ +++WCFNPG M++
Sbjct: 412 FKVHVQIEDTKQTKPAGNSNSKQTGWLGKGNNATSTVSKTAKIINFWCFNPGFGMEQLLN 471
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
+V S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S+Y
Sbjct: 472 TQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDREQLISNY 531
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
+NRD+ +Y LG TI+N++RIVPDGLL+FFPSY +++QC+ W+ + +W +
Sbjct: 532 KNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVDAWQASG------LWADLS 585
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K +EPR F +E++ ++D + GA F AVCRGKVSEGLDFAD GRAV+I
Sbjct: 586 SRKPIFLEPRGKDQFTSTMEEFYQAIRD--SKGACFMAVCRGKVSEGLDFADRNGRAVII 643
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
TG+PF + DPKV LKR YL+ KE +L LSG++WYN A+RAVNQA+GRV
Sbjct: 644 TGLPFPPLKDPKVILKRRYLETN------RTKENQL--LSGQEWYNLDATRAVNQAIGRV 695
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCY---SKFGDVVYTLTRFFREERIC 729
IRHRHDYGAI+ CD RF S+ Q+S WI+ H+ S FG +V L +FF+
Sbjct: 696 IRHRHDYGAILLCDARFQDASQVQQLSKWIRGHLGARPQSSPFGPIVRELRQFFKHAE-- 753
Query: 730 GSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAVD 770
+T V D R ++P L + EE P+ TP+ +
Sbjct: 754 --------QTMVQPDERVVEPP--LQIVCKEEQPTLTPSYN 784
>gi|195448955|ref|XP_002071885.1| GK24923 [Drosophila willistoni]
gi|229891630|sp|B4NDG5.1|RTEL1_DROWI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194167970|gb|EDW82871.1| GK24923 [Drosophila willistoni]
Length = 998
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 309/783 (39%), Positives = 441/783 (56%), Gaps = 87/783 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE Y+ Q +MEKVI L++ N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MPESIIAGIPVHFPFEPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAW- 59
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKL--------------------PTILYT 100
T S+ QI Q + N+++ G + + P ++Y
Sbjct: 60 -----IRTRQSEQQKQIRKLQDAANNTKVGPTGIVPGEAAELALTVGKANNWGVPKVIYA 114
Query: 101 SRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGT 158
SRTHSQL Q ++ELK S Y + V+LGSR+QLCIH EV +G++ N C+ T
Sbjct: 115 SRTHSQLTQAMRELKRSAYAGMRSVVLGSRDQLCIHPEVMREQGNSNKVNMCKMRVHSKT 174
Query: 159 NRRCNHHSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPY 217
C+ RV + K++P G +DIEDLV +G+ CPYF ++EL DI F PY
Sbjct: 175 ---CSFQLRV-ESKKDHPDFRGPSIMDIEDLVKVGQKLKMCPYFASKELVNDADITFMPY 230
Query: 218 NYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDIS 277
NYL+DP RK +E N+I+I DEAHN+E IC ++AS + S + I + + + I
Sbjct: 231 NYLLDPMARKANKIELSNTIVILDEAHNIEKICEESASVQIKSSDVAVAIEDVTHIMRIF 290
Query: 278 STRRGQ--SSDE--TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLAD 333
++ Q S DE D+ +L+ +LL+LEK I V +++ G T P Y+YELLA
Sbjct: 291 TSADSQDFSGDEPKDFTLDDLTLLKEMLLELEKAIDGVVVDNLAEGTTYPASYMYELLAK 350
Query: 334 LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIES---ISNILKIIFRDKGTAHS 390
N T ++ +++ + L QN S + S ++ +L I+F +K +
Sbjct: 351 ANFTYGNCASIVALLDKLVQYLMVAS-QNNSSMIMRKGGSFLVLAELLTIVFANKEDIMA 409
Query: 391 AYYR-----VHVREADANAAD-----------VLKGKA---------SRTLSWWCFNPGI 425
+R V V EA NA + KG ++ +++WCFNPG
Sbjct: 410 KVHRSFKVHVEVEEAKQNAGKPAPKQQQQGGWLGKGNNTSNSSSSNKAKVINFWCFNPGF 469
Query: 426 AMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSG 485
M++ +V S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP
Sbjct: 470 GMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDR 529
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
L S+++NRD+ +Y LG TI+N++RIVPDGLL+FFPSY ++++C+ W+ +
Sbjct: 530 QQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQTSG----- 584
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
+W I K +EPR F +E++ ++D + GA F AVCRGKVSEGLDFAD
Sbjct: 585 -LWADIAAKKPIFLEPRGKDQFTTTMEEFYQAIRD--SKGACFMAVCRGKVSEGLDFADR 641
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
GRAV+ITG+P+ + DPKV LKR YL + KE +L L+G++WYN A+RAV
Sbjct: 642 NGRAVIITGLPYPPLKDPKVILKRRYL------EANRTKENQL--LTGQEWYNLDATRAV 693
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI----QCYSKFGDVVYTLTR 721
NQA+GRVIRHRHDYGAI+ CD RF S+ Q+S WI+ H+ QC S FG +V L +
Sbjct: 694 NQAIGRVIRHRHDYGAILLCDSRFQDNSQVQQLSKWIRGHLGARPQC-SPFGPIVRELRQ 752
Query: 722 FFR 724
FFR
Sbjct: 753 FFR 755
>gi|195049134|ref|XP_001992658.1| GH24089 [Drosophila grimshawi]
gi|229891623|sp|B4JNS2.1|RTEL1_DROGR RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193893499|gb|EDV92365.1| GH24089 [Drosophila grimshawi]
Length = 986
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 304/772 (39%), Positives = 437/772 (56%), Gaps = 70/772 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE YD Q YMEKVI L++ N +LESPTGTGKTL LLC+TL W
Sbjct: 1 MPENIIAGIPVHFPFEPYDVQRAYMEKVIICLRDGTNGVLESPTGTGKTLSLLCSTLGWI 60
Query: 61 KSLGSFSTLGSQ-----VNNQIS---------GSQSSVNSSQSGDSKLPTILYTSRTHSQ 106
++ S L Q Q++ GS+ + +S + +P ++Y SRTHSQ
Sbjct: 61 RTRQSEVQLNMQKLQHDQQTQLTGAAGAGAAMGSEIAAVIGKSNNWGVPKVIYASRTHSQ 120
Query: 107 LRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNH 164
L Q ++ELK + Y + V+LGSR+QLCIH +V +G++ N C+ K + C
Sbjct: 121 LTQAMRELKRTAYANMRAVVLGSRDQLCIHPDVMREQGNSNKVNMCKL---KVHAKSCTF 177
Query: 165 HSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
RV + K++P G +DIEDLV +G+ CPYF ++EL + DI F PYNYL+DP
Sbjct: 178 QLRV-ESKKDHPDFRGPSIMDIEDLVKVGQRLKMCPYFASKELVNSADITFMPYNYLLDP 236
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI-SSTRRG 282
RK +E N+I+I DE HN+E IC ++AS + S + I + + + I +S+
Sbjct: 237 KARKANKIELSNAIVILDEGHNIEKICEESASVQIRSSDVAIAIEDVTHIMKIFTSSSDS 296
Query: 283 QSSDETLNPDNFAI-----LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNIT 337
Q + P +F I L+ +LL+LEK I V +++K G T P Y+YELL N T
Sbjct: 297 QDTAGPDEPKDFTIDDLTLLKEMLLELEKAIDGVIVDNKADGATYPASYMYELLGKANFT 356
Query: 338 QETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKG---TAHSAYYR 394
++ +++ + L Q+ ++++L I+F +KG + S ++
Sbjct: 357 HGNCATIVALLDKLVQYLMVAS-QHSMLRKGGSFMVLADLLNIVFANKGDIMSKVSCSFK 415
Query: 395 VHVR-------------------EADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEV 435
VH + + NAA K R +++WCFNPG M++ V
Sbjct: 416 VHAEIEESKQSQTNNKAQTGWLGKGNNNAASS-ASKTGRIINFWCFNPGFGMEQLLNTHV 474
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S+Y+NR
Sbjct: 475 RSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVNEAQVYVKIIGTGPDREQLISNYKNR 534
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
D+ +Y LG TI+N++RIVPDGLL+FFPSY +++QC+ W+ + +W I K
Sbjct: 535 DNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVDAWQASG------LWADISSRK 588
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+EPR F +E++ ++D + GA F AVCRGKVSEGLDFAD GRAV+ITG+
Sbjct: 589 PIFLEPRGKDQFTSTMEEFYQAIRD--SKGACFMAVCRGKVSEGLDFADRNGRAVIITGL 646
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PF + DPKV LKR YL+ +E +L LSG +WYN +A+RAVNQA+GRVIRH
Sbjct: 647 PFPPLKDPKVILKRRYLETN------RTRENQL--LSGNEWYNLEATRAVNQAIGRVIRH 698
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCY---SKFGDVVYTLTRFFR 724
R+DYGAI+ CD RF S+ Q+S WI+ H+ S FG +V L +FF+
Sbjct: 699 RNDYGAILLCDARFQDASQVQQLSKWIRNHLGARPQSSPFGPIVRELRQFFK 750
>gi|383862044|ref|XP_003706494.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Megachile rotundata]
Length = 974
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 296/767 (38%), Positives = 435/767 (56%), Gaps = 60/767 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLC------ 54
MP I + V FPF+ Y Q YM KVI+ LQN N +LESPTGTGKTL LLC
Sbjct: 1 MPEITINNVIVNFPFKPYSVQEEYMTKVIECLQNNKNGVLESPTGTGKTLSLLCSSLSWL 60
Query: 55 ----ATLAWRKSLGSFS--TLGS----QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTH 104
A + + +G+ T G ++NN++ + S S P I+Y SRTH
Sbjct: 61 LTRKAQMQAQSLIGAVDNPTFGGHFFKKLNNELKEATGSTKPSTGFTWAAPKIIYASRTH 120
Query: 105 SQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCN 163
SQL Q +QELK ++Y+ + +LGSR+QLCIH EVS + + +N K +R C
Sbjct: 121 SQLSQAMQELKRTSYKHVSVAVLGSRDQLCIHPEVS--KETNSSNKIHMCHSKLKSRTCF 178
Query: 164 HHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
+++ V + K +P E +DIEDLV G+ + CPYF++REL++T DI F PYNYL+DP
Sbjct: 179 YYNNV-ETRKEDPFFKQEVLDIEDLVKAGQKYRCCPYFLSRELKQTADITFMPYNYLLDP 237
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ 283
R+ G++ +N +++ DEAHN+E IC +AAS + S + CI E ++ + +
Sbjct: 238 KSRRSQGIDLQNCVVLLDEAHNIEKICEEAASLQICSTDIAMCIEELSVVMEDMAKEMTE 297
Query: 284 SSD---ETLN------PDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
+D ET N D+ IL+++ L+LEK I + I +E G T P +I+ELL
Sbjct: 298 QNDFLTETTNVQKDFTADDLCILKSMFLELEKAIDAIEIKKREEGDTHPSGFIFELLEKA 357
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR 394
+T +ID ++ L + + + ++ S++L+ +F + +SA Y+
Sbjct: 358 QLTHGKEQLVIDKLDKIVFYLSTASI-SPFARKGNALQKFSDLLRTVF---SSGNSARYK 413
Query: 395 ----------VHVREADANAADVLKGKA------SRTLSWWCFNPGIAMQEFSRLEVGSI 438
+ V E DV + K + +S+WCF+PG +M + V SI
Sbjct: 414 EKIKQCYKVYIQVEEPKKGKKDVWESKKKVLKNEGKIISYWCFSPGYSMHQLMEQGVHSI 473
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
+LTSGTLSP+ F +L + +++ENPH++ QI G++ GP GY LNSS+ R+
Sbjct: 474 VLTSGTLSPLQPFISDLGIPIEVQLENPHIVKGDQICVGVLSQGPDGYSLNSSFNTRNDP 533
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER-ICKHKKP 557
+Y LG TI N + ++P+GLL+FFPSY +M +C W+N G T I ER +
Sbjct: 534 KYIMSLGRTIFNFSCLIPEGLLVFFPSYPVMKKCREEWQNV--GLWTKIAERKVIIIYIC 591
Query: 558 VVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
+ F + +Y K+ D S GA+F AVCRGKVSEGLDFA+ GRAV+ITG+PF
Sbjct: 592 YIIIYIRDEFASIMSEYYEKINDPSHKGAIFMAVCRGKVSEGLDFANANGRAVLITGLPF 651
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
+ DP+V LK++YL+ E K LSG+ WY +ASRAVNQA+GR+IRH++
Sbjct: 652 PPLKDPRVILKQQYLE--------EMKRLDKETLSGQQWYQLEASRAVNQAIGRIIRHKN 703
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGAII CD RF +PS K Q+S W++PH++ ++ FG + L FF+
Sbjct: 704 DYGAIILCDCRFENPSFKKQLSAWLRPHVKKFNNFGVITKDLRDFFK 750
>gi|145354926|ref|XP_001421725.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581963|gb|ABP00019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 749
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 285/751 (37%), Positives = 430/751 (57%), Gaps = 53/751 (7%)
Query: 7 RGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSF 66
R V+FPFEAYD QLV+MEK + ++ +ALLESPTGTGKTLCLL + LA+ +S G
Sbjct: 19 RAFTVDFPFEAYDNQLVFMEKALLAMCRGEHALLESPTGTGKTLCLLASALAFVRSEGRA 78
Query: 67 STL-----------GSQVNNQISGSQSS--VNSSQSGD-SKLPTILYTSRTHSQLRQVIQ 112
G+ + ++G+ V+ + + ++ P I+Y +RTHSQ+ QV++
Sbjct: 79 RKRKFREEVRDGRGGAGDADDVAGTSGREFVDDVEKKERTRAPVIVYATRTHSQVDQVVR 138
Query: 113 ELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM 172
ELK + + L SR C +V L G+ Q N C L ++ ++C + +
Sbjct: 139 ELKLFDSTTRATTLASRRHACARDDVRALNGTEQKNRCAKLVQQ---QKCGAKVTLDRAL 195
Query: 173 KNNPH----LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ D DIEDLV+ + GPCP+++ R +I+F PYNYL+D RKG
Sbjct: 196 QGRDGRFDLFSDGVQDIEDLVSKAKARGPCPFYLARTKCAEAEIIFMPYNYLLDESVRKG 255
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD-- 286
L + W+N+++I DEAHNLE +D+ S+ L++ L I E++ + T S +
Sbjct: 256 LEIAWENAVIIVDEAHNLESSASDSMSYSLTAAKLAKAIKESERAYETKLTLEDTSGEGI 315
Query: 287 --ETLNPDNFAILRALLLKLE-------KRIAEVPINSKELGFTK---PGPYIYELLADL 334
++F +L +L++LE + A+ P E G + G +IY +LA+L
Sbjct: 316 DAAAFKGEDFKMLTGVLVQLEGLLDSICREAAKAPNAKHEGGLGERIGDGAFIYVILAEL 375
Query: 335 NITQETAYKLIDIVEVAAELLQ-EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYY 393
NIT +T + +++ A+ +Q + + + I N ++ IF + + Y+
Sbjct: 376 NITADTYEHITKLIKSASRTVQLGSDFMAQPTQNETPLMEIGNFIERIFVHR---YEQYF 432
Query: 394 RVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ 453
+ + +A TLS+WCF PG+ ++ VG+ +L SGTLSPM+SFA
Sbjct: 433 VTRLGPDMEKFKTSNRARAGPTLSYWCFFPGLCLKALIDKGVGTFLLASGTLSPMESFAS 492
Query: 454 ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
EL L+FP+R+ENPHVI Q+W G+V GP+ +LNSS+R RD+ EYK E+G+ I++ AR
Sbjct: 493 ELALDFPVRLENPHVIKRNQVWGGVVTHGPNNGVLNSSFRFRDTREYKTEIGSVILSTAR 552
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
IVPDGLL+FFPSY +M C+ W++T +W ++ +K +VEP + F +
Sbjct: 553 IVPDGLLVFFPSYGVMHSCVNHWRSTG------LWNQLETNKTCLVEPSNADEFHACYDS 606
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y L++ S GA FFAVCRGK+SEG+DFAD A R V++TG+P+A DP V KR YLD
Sbjct: 607 YNKALEEDSRRGAAFFAVCRGKLSEGIDFADKACRGVILTGIPYAGAKDPLVMHKRTYLD 666
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ GG Y SG +WY+Q A RAVNQA+GRVIRH+ D+GA+I DERFA+ +
Sbjct: 667 KRKADNGGAY--------SGNEWYSQTAMRAVNQALGRVIRHKDDFGAVILADERFANEN 718
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
++Q+SLW++P +Q +S F V+ L FF+
Sbjct: 719 ARNQLSLWLRPSVQVHSVFHSAVHGLKEFFQ 749
>gi|308812532|ref|XP_003083573.1| helicase-related (ISS) [Ostreococcus tauri]
gi|116055454|emb|CAL58122.1| helicase-related (ISS) [Ostreococcus tauri]
Length = 1048
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 294/776 (37%), Positives = 435/776 (56%), Gaps = 71/776 (9%)
Query: 1 MPTYKIRGID---------VEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLC 51
MP Y +D V FP++AYD Q+V++E+ ++++ K +ALLESPTGTGKTLC
Sbjct: 1 MPDYAFACVDATGANRKFTVSFPYDAYDAQIVFIERALEAMCRKQSALLESPTGTGKTLC 60
Query: 52 LLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGD-----SKLPTILYTSRTHSQ 106
LL A LA+ ++ G ++ + S S++ + + PTI+Y +RTHSQ
Sbjct: 61 LLSAALAYARNEGRAKKRRARAREKASTSETVTEEFVDAEVRRERERAPTIVYATRTHSQ 120
Query: 107 LRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHS 166
+RQV+ ELK + + L SR+ C +V L G AQNN C L R+C +
Sbjct: 121 VRQVLGELKVLDSNTRATTLASRKHACAREDVRALVGDAQNNRCSKLV---AERKCGAKN 177
Query: 167 RVADYMKNNPHLGDE-------PIDIEDLVNIG-RTFGPCPYFMTRELQKTVDIVFAPYN 218
V D N +G++ DIEDLV ++ GPCP++++R +I+F PYN
Sbjct: 178 -VLDMSLNRKGIGEKFDVFEGGVRDIEDLVIAAQKSRGPCPFYLSRTKCADAEIIFMPYN 236
Query: 219 YLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS 278
YL++ R+GL + W+++++I DEAHNLE AD+ S+ L++ L I E + +
Sbjct: 237 YLLNDTVRRGLDIVWEDAVVIVDEAHNLESSAADSMSYSLTAAKLAKAIQETNSAWETKL 296
Query: 279 T------------------RRGQSSDETLNPDNFAI-LRALLLKLEKRI----AEVPINS 315
T +RG + + N + L LL+LE+ + E S
Sbjct: 297 TVDDNDEEGVLRDDQKELFKRGMGEEASAFGSNDVLELGRTLLQLEEVLDGVCREASTKS 356
Query: 316 KELGF----TKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ--EDKLQNKKST-TA 368
+ G + G +IY LL + ITQ T + + I++ AA+++Q D ++ T
Sbjct: 357 GKSGTLGECVEDGAFIYNLLERVGITQFTYQRAVTIMKGAAKMVQLGSDFMEAATGTHKE 416
Query: 369 CRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQ 428
+ I+N ++ +F + Y+ V N + + TLS+WCF PG+ ++
Sbjct: 417 TPLTEIANFIERLFTKRA---DQYFVTRVGPDTDNFKTSQRQRQGPTLSYWCFFPGLCLK 473
Query: 429 EFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLL 488
E VGS +L SGTLSPM+SF+ EL + FP+R+ENPHVI QIW G++ GP G +L
Sbjct: 474 ELIEKNVGSFLLASGTLSPMESFSSELAMEFPVRLENPHVIQRNQIWGGVLTHGPGGNVL 533
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
NSS+R RD+ YK+E+G+ I++ A+IVPDGLL+FFPSY +M+ CI W+ G +W
Sbjct: 534 NSSFRFRDTDNYKKEIGSVILSTAKIVPDGLLVFFPSYGVMNSCIDHWRFVEGG----LW 589
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
I K +EP S F + Y L D + GA+FFAVCRGKVSEG+DFAD A R
Sbjct: 590 AGIEASKTCFIEPSNSEEFQECYKRYNEALNDGTRRGAIFFAVCRGKVSEGIDFADKACR 649
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
V++TG+P+A DP V KR +LD + + G Y SG +WY+Q A RAVNQA
Sbjct: 650 GVILTGIPYAGAKDPLVMHKRSFLDKRRANDGESY--------SGNEWYSQTAMRAVNQA 701
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+GR IRH++D+GA+I DERFA+ + ++Q+SLW++P IQ +S F VV L FF+
Sbjct: 702 LGRAIRHKNDFGAVILADERFANENARNQLSLWLRPSIQVHSVFNSVVSGLRDFFQ 757
>gi|195396523|ref|XP_002056881.1| GJ16649 [Drosophila virilis]
gi|229891629|sp|B4M891.1|RTEL1_DROVI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194146648|gb|EDW62367.1| GJ16649 [Drosophila virilis]
Length = 1005
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 303/769 (39%), Positives = 435/769 (56%), Gaps = 65/769 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE Y+ Q YMEKVI L++ N +LESPTGTGKTL LLCA+LAW
Sbjct: 1 MPENIIAGIPVHFPFEPYEVQRAYMEKVIMCLRDGTNGVLESPTGTGKTLSLLCASLAWI 60
Query: 61 KSLGS---------FSTLGSQVNNQISGSQSSVNS--SQSGDSKLPTILYTSRTHSQLRQ 109
++ S Q + +N+ ++ + +P ++Y SRTHSQL Q
Sbjct: 61 RTRQSEQQQYMQKLQLDQQKQATGGAGAGVADLNAVMGKANNWGVPKVIYASRTHSQLSQ 120
Query: 110 VIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNHHSR 167
++ELK + Y K V+LGSR+QLCIH +V +G++ N C+ K + C+ R
Sbjct: 121 AMRELKRTAYANMKSVVLGSRDQLCIHPDVMREQGNSNKVNMCKL---KVHAKTCSFQLR 177
Query: 168 VADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V + K++P G +DIEDLV +G+ CPYF ++EL DI F PYNYL+DP R
Sbjct: 178 V-ESKKDHPDFRGPSIMDIEDLVKVGQRLKMCPYFASKELVNGADITFMPYNYLLDPKAR 236
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD 286
K +E N+I+I DEAHN+E IC ++AS + S + I + + + I ++ Q +
Sbjct: 237 KANKIELSNTIVILDEAHNIEKICEESASVQIRSSDVAMAIEDITHIMKIFTSGDAQDTG 296
Query: 287 ETLNPDNFAI-----LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETA 341
P +F + L+ +LL+LEK I V +++K G T P +IYELL N T
Sbjct: 297 GPEEPKDFTLDDLTLLKEMLLELEKAIDGVVVDNKAEGTTYPAAHIYELLGKANFTYGNC 356
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR---VHVR 398
++ +++ + L + ++++L I+F +K S +R VHV
Sbjct: 357 ATIVALLDKLVQYLMVASQHSTMLRKGGSFMVLADLLNIVFANKEDVMSKVHRSFKVHVE 416
Query: 399 EAD-------ANAADVLKG-------------KASRTLSWWCFNPGIAMQEFSRLEVGSI 438
D AN+A G KA++ +++WCFNPG M++ V S+
Sbjct: 417 IEDNKQSKNAANSAKPQTGWLGKGNNAASSVTKAAKIINFWCFNPGFGMEQLLNAHVRSV 476
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S+Y+NRD+
Sbjct: 477 ILTSGTLAPLKPLIAELAIPVAQHLENPHIVDRSQVYVKIIGTGPDREQLISNYKNRDNP 536
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
+Y LG TI+N++RIVPDGLL+FFPSY +++QC+ W+ + +W I K
Sbjct: 537 KYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVDAWQASG------LWADISCRKPIF 590
Query: 559 VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFA 618
+EPR F +E++ ++D + GA F AVCRGKVSEGLDFAD GRAV+ITG+PF
Sbjct: 591 LEPRGKDQFTSTMEEFYQAIRD--SKGACFMAVCRGKVSEGLDFADRNGRAVIITGLPFP 648
Query: 619 TMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
+ DPKV LKR YL+ KE +L LSG++WYN A+RAVNQA+GRVIRHR+D
Sbjct: 649 PLKDPKVVLKRRYLETN------RTKENQL--LSGQEWYNLDATRAVNQAIGRVIRHRND 700
Query: 679 YGAIIFCDERFAHPSRKSQISLWIQPHIQCY---SKFGDVVYTLTRFFR 724
YGAI+ CD RF S+ Q+S WI+ H+ S FG +V L +FF+
Sbjct: 701 YGAILLCDARFQDMSQVQQLSKWIRGHLGARPQSSPFGPIVRELRQFFK 749
>gi|332030654|gb|EGI70342.1| Regulator of telomere elongation helicase 1-like protein
[Acromyrmex echinatior]
Length = 976
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 295/775 (38%), Positives = 436/775 (56%), Gaps = 81/775 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTL---------- 50
MP I I V FPF+ Y Q YM+KVI+ LQN + +LESPTGTGKTL
Sbjct: 1 MPDVIINDIIVTFPFKPYPVQEEYMKKVIECLQNGQHGVLESPTGTGKTLNLLCSSLSWL 60
Query: 51 --------CLLCATLAWRKSLGS--FSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYT 100
+ A +K G F L S + + +G +V QS +P I+Y
Sbjct: 61 LTKKAQLQAQVIAGAIEKKDFGGNFFKYLTSGLE-KAAGVPDNV---QSFGWAIPKIIYA 116
Query: 101 SRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTN 159
SRTHSQL Q + ELK ++Y+ +LGSR+QLCIH EVS + ++ N K +
Sbjct: 117 SRTHSQLSQAMYELKKTSYKHVATAVLGSRDQLCIHPEVS--KETSSFNKIHMCHAKVKS 174
Query: 160 RRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
R C + + V + K++P E +DIEDLV +G+ CPYF+ +EL++ DIVF PYNY
Sbjct: 175 RTCFYFNNV-EARKDDPVFKQEVLDIEDLVKVGQKHKCCPYFLAKELKQNADIVFMPYNY 233
Query: 220 LIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
L+DP R+ G++ +N++++ DEAHN+E +C +AAS +SS + CI E + +
Sbjct: 234 LLDPKTRRSQGIDLQNTVVLLDEAHNVEKVCEEAASLQISSTDIAMCIDEVTAVMQDMAK 293
Query: 280 RRGQSSD--------ETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELL 331
Q +D + ++ IL+A+ L+LEK I + + ++ G T PG YI+ELL
Sbjct: 294 DSEQQNDFLSENNVQKDFTAEDLCILKAMFLELEKAIDSIELKNRSDGDTFPGGYIFELL 353
Query: 332 ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR--------IESISNILKIIFR 383
+ +T ++D + DKL +TT+ ++ S++LK F
Sbjct: 354 EKIELTHGKEQIVVDKL---------DKLILYLTTTSTSPFARKGNALQKFSDLLKTAFN 404
Query: 384 DKG--TAHSAY----YRVHVREADANAA---DVLKGKAS-----RTLSWWCFNPGIAMQE 429
T H Y+VH++ + DV + K + + +S+WCF+PG M++
Sbjct: 405 SGASITRHKEKVKRCYKVHIQMEEQKKNYRNDVWESKKTTKTDGKLISYWCFSPGFGMEQ 464
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
+ S++LTSGTLSP+ F EL + +++ENPH++T +Q+ G++ GP + LN
Sbjct: 465 MVEQGIRSVVLTSGTLSPLKPFISELGIPIAVQLENPHIVTKEQVCVGVLSQGPDNHPLN 524
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
SSY R+ +Y LG T+ N + IVP GLLIFFPSY +M +C W+N +W
Sbjct: 525 SSYNTRNDPKYIASLGRTVYNFSCIVPHGLLIFFPSYPIMKKCRDEWQNMG------LWT 578
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
+I + K VEP F + +Y K+KD S GAVF AVCRGKVSEGLDFA+ GRA
Sbjct: 579 QIAERKPIYVEPNSKDGFVNVMNEYYQKIKDPSCKGAVFMAVCRGKVSEGLDFANANGRA 638
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V+I G+PF + DP++ LK+ YL+ E + TK L+G++WY +ASRAVNQA+
Sbjct: 639 VLIIGLPFPPLKDPRIMLKQRYLE--------EIRTTKKEGLTGQEWYQLEASRAVNQAI 690
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
GR+IRH+ DYGA+I CD RF +P+ K Q+S W++P+I+ ++ FG + L FFR
Sbjct: 691 GRIIRHKSDYGAVILCDCRFENPNFKKQLSAWLRPYIKKFTNFGMITKELREFFR 745
>gi|24639946|ref|NP_572254.1| CG4078, isoform A [Drosophila melanogaster]
gi|442615242|ref|NP_001259262.1| CG4078, isoform B [Drosophila melanogaster]
gi|75027961|sp|Q9W484.1|RTEL1_DROME RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|7290625|gb|AAF46074.1| CG4078, isoform A [Drosophila melanogaster]
gi|60677863|gb|AAX33438.1| RE31401p [Drosophila melanogaster]
gi|220952186|gb|ACL88636.1| CG4078-PA [synthetic construct]
gi|440216460|gb|AGB95108.1| CG4078, isoform B [Drosophila melanogaster]
Length = 985
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 310/788 (39%), Positives = 446/788 (56%), Gaps = 83/788 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE Y Q YMEKVI L++ N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MPESLIAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 61 KSLGS-------------FSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQL 107
++ S FS L S+ + ++ + +P ++Y SRTHSQL
Sbjct: 61 RTRQSEHQKQMVKMEKADFSGL-GGGAPGGDLSELAKTMGRANNWGVPKVIYASRTHSQL 119
Query: 108 RQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRG-SAQNNACRFLCKKGTNRRCNHH 165
Q ++ELK + Y + V+LGSR+QLCIH EV +G S + N C+ T C+
Sbjct: 120 TQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKT---CSFQ 176
Query: 166 SRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
RV + K++P L G +DIEDLV +G+ CPYF +REL DI F PYNYL+DP
Sbjct: 177 MRV-ESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPK 235
Query: 225 FRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS 284
RK +E N+I+I DEAHN+E IC ++AS + S + I + + + + ++ G+S
Sbjct: 236 ARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIMQVFAS--GES 293
Query: 285 SDETLN-PDNFAI-----LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQ 338
D + P +F + L+ +LL+LEK I + +++ G T P +YELL N T
Sbjct: 294 QDMAGDEPKDFTLDDLTLLKEMLLELEKAIDAIVVDNAVDGTTFPASMMYELLGKANFTY 353
Query: 339 ETAYKLIDIVE--VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHS---AYY 393
++ +++ V L+ ++ +K T +S++L I+F +K S A +
Sbjct: 354 GNVATIVSLLDKLVQYLLVASQQMSIRKGGT---FTLLSDLLTIVFANKEDVMSKVYASF 410
Query: 394 RVHVREADAN---------------------AADVLKGKASRTLSWWCFNPGIAMQEFSR 432
+VHV ++ AA K ++ +++WCFNPG M++
Sbjct: 411 KVHVLVEESKQGHGKQQGAKQQGGWLGKGTIAAATGLSKVAKIINFWCFNPGFGMEQLLN 470
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
+V S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S+Y
Sbjct: 471 TQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNY 530
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
NRD+ +Y LG TI+N+ARIVPDGLL+FFPSY ++++C+ W+ + +W I
Sbjct: 531 ANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASG------LWADIS 584
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K +EPR F +E++ ++D + GAVF AVCRGKVSEGLDFAD GRAV+I
Sbjct: 585 CKKPIFLEPRSKDQFTSTMEEFYQAIRD--SKGAVFMAVCRGKVSEGLDFADRNGRAVII 642
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
TG+PF + DPKV LKR YL + +E +L LSG++WYN A+RAVNQA+GRV
Sbjct: 643 TGLPFPPLKDPKVILKRRYL------EANRTRENQL--LSGQEWYNLDATRAVNQAIGRV 694
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI----QCYSKFGDVVYTLTRFFREERI 728
IRHR+DYGAI+ CD RF S+ Q+S WI+ H+ QC S FG +V L +FF+
Sbjct: 695 IRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDRPQC-SPFGPIVRELRQFFKN--- 750
Query: 729 CGSTNLKL 736
N+KL
Sbjct: 751 -AEANMKL 757
>gi|328783139|ref|XP_396001.4| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Apis mellifera]
Length = 976
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 299/776 (38%), Positives = 434/776 (55%), Gaps = 75/776 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCL-------- 52
MP I I + FPF+ Y Q YM KVIQ LQN N +LESPTGTGKTL L
Sbjct: 1 MPDVTINNIIINFPFKPYSIQEEYMAKVIQCLQNSKNGVLESPTGTGKTLSLLCSSLSWL 60
Query: 53 -----------LCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTS 101
L T+ G F Q+NN + S + S + + P I+Y S
Sbjct: 61 LTKKAQLQAQSLVNTIEEPNFGGHFF---KQLNNGLKKSTGD-SESITFNWNAPKIIYAS 116
Query: 102 RTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNR 160
RTHSQL Q +QELK ++Y+ +LGSR+QLCIH EVS + + +N K +R
Sbjct: 117 RTHSQLSQAMQELKRTSYKHVGTAVLGSRDQLCIHPEVS--KETNSSNKIYMCHSKVKSR 174
Query: 161 RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +++ + + K++P E +DIEDLV G+ F CPYF++REL++ DI+F PYNY+
Sbjct: 175 TCFYYNNI-ESRKDDPFFKQEILDIEDLVKAGQKFKCCPYFLSRELKQNADIIFMPYNYI 233
Query: 221 IDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI-----D 275
+D RK G++ +N+I++FDEAHN+E IC + AS +SS + CI E + D
Sbjct: 234 LDAKSRKIQGIDIQNNIILFDEAHNIEKICEETASLQISSTDIAMCIDEITVVMEDMAKD 293
Query: 276 ISS-----TRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYEL 330
I ++ + D+ IL+A+ L+LEK I + I ++ G T PG YI+EL
Sbjct: 294 IEQQNNFLMENSENVQKDFTADDLCILKAMFLELEKAIDAISIVKRDEGDTFPGGYIFEL 353
Query: 331 LADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHS 390
L + +I+ +E L + + ++ S++LK F + S
Sbjct: 354 LGKAQLIHGREQLVIEKLEKIVFYLTTTS-TSPFTRKGNALQKFSDLLKTAFSSDNSLFS 412
Query: 391 A-----YYRVHV--------READA-NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
YY+V++ ++ D + +L + +++WCF+PG +MQ+
Sbjct: 413 KEKIKQYYKVYIQLEEHKKSKQNDVWDKKKILSKNEGKIINYWCFSPGFSMQQLKNQGAR 472
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
+IILTSGTLSP+ F EL + +++EN H++ QI GI+ GP GY LNSS+ R+
Sbjct: 473 AIILTSGTLSPLKPFISELGIPIEVQLENSHIVKEDQICVGILSQGPDGYSLNSSFNTRN 532
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK- 555
+Y + LG TI N + +VP GLL+FFPSY +M +C W+NT +W +I K
Sbjct: 533 DPKYIRSLGQTIFNFSCLVPYGLLVFFPSYPIMKKCKEEWQNTG------LWTKIADRKV 586
Query: 556 -------KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
K ++ ++ F + +Y K+KD S +GA+F AVCRGKVSEGLDFA+ GR
Sbjct: 587 IIFNIYIKMIIYNKKDG-FINVMNEYYEKIKDPSCTGAIFMAVCRGKVSEGLDFANANGR 645
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
AV+ITG+PF + DP+V LK+ YL+ E K+ LSG+ WY +ASRAVNQA
Sbjct: 646 AVLITGLPFPPLKDPRVILKQRYLE--------EIKKQDKEALSGQQWYQLEASRAVNQA 697
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+GR+IRH++DYGAII CD RF +PS K Q+S W++PHI+ ++ FG +V L FFR
Sbjct: 698 IGRIIRHKNDYGAIILCDYRFDNPSFKKQLSAWLRPHIKNFTCFGIIVKELKGFFR 753
>gi|307176988|gb|EFN66294.1| Regulator of telomere elongation helicase 1 [Camponotus floridanus]
Length = 978
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 292/790 (36%), Positives = 445/790 (56%), Gaps = 69/790 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLC--------- 51
MP I I V FPF+ Y Q YM KVI+ LQN + +LESPTGTGKTL
Sbjct: 1 MPDITINDIIVSFPFKPYSVQEEYMRKVIECLQNGQHGVLESPTGTGKTLSLLCSSLSWL 60
Query: 52 ----------LLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTS 101
++ + + G F + SG +V QS +P I+Y S
Sbjct: 61 LTKKAQLQAQVIAGAIEKKDFGGHFFKYLVDGLEKASGVPDNV---QSFGWAMPKIIYAS 117
Query: 102 RTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNR 160
RTHSQL Q + ELK ++Y+ +LGSR+QLCIH EVS + ++ N K +R
Sbjct: 118 RTHSQLSQAMYELKKTSYKHVATAVLGSRDQLCIHPEVS--KEASAFNKIHMCHSKVKSR 175
Query: 161 RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +++ V + K++P E +DIEDLV IG+ CPYF+ +EL++ DIVF PYNYL
Sbjct: 176 TCFYYNNV-EARKDDPVFKQEVLDIEDLVKIGQKHKCCPYFLAKELKQNADIVFMPYNYL 234
Query: 221 IDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE--------AKN 272
+DP RK G++ +N++++ DEAHN+E +C +AAS +SS + CI E AK+
Sbjct: 235 LDPKTRKSQGIDLQNTVVLLDEAHNVEKVCEEAASLQISSTDIALCIDEVTAVMKDMAKD 294
Query: 273 CIDISSTRRGQSS-DETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELL 331
ID+ + +++ + ++ IL+ + L+LEK + + + ++ G T PG +I+ELL
Sbjct: 295 -IDLENDFSPENNVQKDFTAEDLYILKTMFLELEKAVDSIELKNRTEGDTFPGGFIFELL 353
Query: 332 ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSA 391
+ +T ++D +E L + + ++ S++LK F + GT+ +
Sbjct: 354 EKIELTHGKEQIVVDKLEKIISYLTTTS-TSPFARKGNALQKFSDLLKTAF-NSGTSITR 411
Query: 392 Y-------YRVHVREADANAA---DVLKGKAS-----RTLSWWCFNPGIAMQEFSRLEVG 436
+ Y+VH++ + DV + K + + +S+WCF+PG M++ +
Sbjct: 412 HKEKVKRCYKVHIQTEEQKKNYKNDVWETKKTIKTDGKLISYWCFSPGFGMEQMVEQGIR 471
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
S+ILTSGTLSP+ F EL + +++ENPH++T +Q+ G++ GP + LNSSY R+
Sbjct: 472 SVILTSGTLSPLKPFISELGIPIAVQLENPHIVTKQQVCVGVLSQGPDNHPLNSSYNTRN 531
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
+Y LG T+ N + I+P GLLIFFPSY +M +C W+N +W +I + K
Sbjct: 532 DPKYIASLGRTVYNFSCIIPHGLLIFFPSYPIMKKCRDEWQNMG------LWTQIAERKP 585
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
VEP F + +Y K++D S GAVF AVCRGKVSEGLDFA+ GRAV+I G+P
Sbjct: 586 IYVEPNSKDGFVNVMNEYYQKIRDPSNKGAVFMAVCRGKVSEGLDFANANGRAVLIIGLP 645
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
F + DP+V LK+ YL+ E + + L+G++WY +ASRAVNQA+GR+IRH+
Sbjct: 646 FPPLKDPRVMLKQRYLE--------EIRTAEKESLTGQEWYQLEASRAVNQAIGRIIRHK 697
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR--EERICGSTNL 734
DYGA+I CD RF +P+ K Q+S W++P+I+ ++ FG + L FFR E + N
Sbjct: 698 SDYGAVILCDCRFENPNFKKQLSAWLRPYIKKFTNFGMITKELREFFRNAENTLPLPNNA 757
Query: 735 KLIKTEVSGD 744
+I+ + D
Sbjct: 758 SIIRAQYGND 767
>gi|198467617|ref|XP_001354453.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
gi|229891755|sp|Q29FS3.2|RTEL1_DROPS RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|198149329|gb|EAL31506.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
Length = 1009
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 302/775 (38%), Positives = 441/775 (56%), Gaps = 76/775 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
MP I GI V FPFE Y+ Q YMEKVI L++ N +LESPTGTGKTL LLCA+LAW
Sbjct: 1 MPESVIAGIPVHFPFEPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAWI 60
Query: 60 --RKSLGSFSTLGSQVNNQ---------ISGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
R+S + + ++ S+ ++ Q+ + +P ++Y SRTHSQL
Sbjct: 61 RTRQSEHQQQMIKLKATSKEGGPGSGPGGDLSELAMTVGQANNWGVPKVIYASRTHSQLN 120
Query: 109 QVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNHHS 166
Q ++ELK + Y + V+LGSR+QLCIH EV +G++ N C+ T C
Sbjct: 121 QAMRELKRTAYANMRSVVLGSRDQLCIHPEVMKEQGNSNKVNLCKLRVHSKT---CTFQL 177
Query: 167 RVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
RV + K++P G +DIEDLV +G+ CPY+ ++EL DI F PYNYL+DP
Sbjct: 178 RV-ESKKDHPDFRGPSIMDIEDLVRVGQKLKMCPYYASKELVAQADITFMPYNYLLDPKA 236
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSS 285
RK +E N+I+I DEAHN+E IC ++AS + S + I + + + + ++ Q +
Sbjct: 237 RKANKIELGNTIIILDEAHNIEKICEESASVQIRSSDVAMAIEDVTHIMKVFTSGESQEA 296
Query: 286 ------DETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQE 339
D TL D+ +L+ +LL+LEK I V +++ G T P +YELL N T
Sbjct: 297 GGDEPKDFTL--DDLTLLKEMLLELEKAIDAVVVDNPTDGTTYPASLMYELLGKANFTYG 354
Query: 340 TAYKLIDIVE--VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY---YR 394
++ +++ V ++ + +K T +S++L I+F +K S ++
Sbjct: 355 NCATIVALLDKLVQYLMVASQHMTIRKGGT---FTMLSDLLTIVFANKENIMSKVHLSFK 411
Query: 395 VHVREADANAADVLKG----------------------KASRTLSWWCFNPGIAMQEFSR 432
VHV+ ++N G KA++ +++WCFNPG M++
Sbjct: 412 VHVQVEESNKQQGKSGATQGKQQGWLGKGNITTTGTSSKAAKIVNFWCFNPGFGMEQLLN 471
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
+V S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S++
Sbjct: 472 TQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNF 531
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
+NRD+ +Y LG TI+N+ARIVPDGLL+FFPSY ++++C+ W+ + +W I
Sbjct: 532 KNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASG------LWADIS 585
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F +E++ ++D + GAVF AVCRGKVSEGLDFAD GRAV+I
Sbjct: 586 CKKPIFVEPRGKDQFTSTMEEFYQAIRD--SKGAVFMAVCRGKVSEGLDFADRNGRAVII 643
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
TG+PF + DPKV LKR YL+ KE +L LSG++WYN A+RAVNQA+GRV
Sbjct: 644 TGLPFPPLKDPKVILKRRYLET------NRTKENQL--LSGQEWYNLDATRAVNQAIGRV 695
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCY---SKFGDVVYTLTRFFR 724
IRHR+DYGAI+ CD RF S+ Q+S WI+ H+ S FG +V L +FF+
Sbjct: 696 IRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHLGARPQSSPFGPIVRELRQFFK 750
>gi|195162511|ref|XP_002022098.1| GL14463 [Drosophila persimilis]
gi|229891625|sp|B4GU19.1|RTEL1_DROPE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194103996|gb|EDW26039.1| GL14463 [Drosophila persimilis]
Length = 1009
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 302/775 (38%), Positives = 441/775 (56%), Gaps = 76/775 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
MP I GI V FPFE Y+ Q YMEKVI L++ N +LESPTGTGKTL LLCA+LAW
Sbjct: 1 MPESVIAGIPVHFPFEPYNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAWI 60
Query: 60 --RKSLGSFSTLGSQVNNQ---------ISGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
R+S + + ++ S+ ++ Q+ + +P ++Y SRTHSQL
Sbjct: 61 RTRQSEHQQQMIKLKATSKEGGPGSGPGGDLSELAMTVGQANNWGVPKVIYASRTHSQLN 120
Query: 109 QVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNHHS 166
Q ++ELK + Y + V+LGSR+QLCIH EV +G++ N C+ T C
Sbjct: 121 QAMRELKRTAYANMRSVVLGSRDQLCIHPEVMKEQGNSNKVNLCKLRVHSKT---CTFQL 177
Query: 167 RVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
RV + K++P G +DIEDLV +G+ CPY+ ++EL DI F PYNYL+DP
Sbjct: 178 RV-ESKKDHPDFRGPSIMDIEDLVRVGQKLKMCPYYASKELVAQADITFMPYNYLLDPKA 236
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSS 285
RK +E N+I+I DEAHN+E IC ++AS + S + I + + + + ++ Q +
Sbjct: 237 RKANKIELGNTIIILDEAHNIEKICEESASVQIRSSDVAMAIEDVTHIMKVFTSGESQEA 296
Query: 286 ------DETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQE 339
D TL D+ +L+ +LL+LEK I V +++ G T P +YELL N T
Sbjct: 297 GGDEPKDFTL--DDLTLLKEMLLELEKAIDAVVVDNPTDGTTYPASLMYELLGKANFTYG 354
Query: 340 TAYKLIDIVE--VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY---YR 394
++ +++ V ++ + +K T +S++L I+F +K S ++
Sbjct: 355 NCATIVALLDKLVQYLMVASQHMTIRKGGT---FTMLSDLLTIVFANKENIMSKVHLSFK 411
Query: 395 VHVREADANAADVLKG----------------------KASRTLSWWCFNPGIAMQEFSR 432
VHV+ ++N G KA++ +++WCFNPG M++
Sbjct: 412 VHVQVEESNKQQGKSGAIQGKQQGWLGKGNITTTGTSSKAAKIVNFWCFNPGFGMEQLLN 471
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
+V S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S++
Sbjct: 472 TQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNF 531
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
+NRD+ +Y LG TI+N+ARIVPDGLL+FFPSY ++++C+ W+ + +W I
Sbjct: 532 KNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASG------LWADIS 585
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K VEPR F +E++ ++D + GAVF AVCRGKVSEGLDFAD GRAV+I
Sbjct: 586 CKKPIFVEPRGKDQFTSTMEEFYQAIRD--SKGAVFMAVCRGKVSEGLDFADRNGRAVII 643
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
TG+PF + DPKV LKR YL+ KE +L LSG++WYN A+RAVNQA+GRV
Sbjct: 644 TGLPFPPLKDPKVILKRRYLET------NRTKENQL--LSGQEWYNLDATRAVNQAIGRV 695
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCY---SKFGDVVYTLTRFFR 724
IRHR+DYGAI+ CD RF S+ Q+S WI+ H+ S FG +V L +FF+
Sbjct: 696 IRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHLGARPQSSPFGPIVRELRQFFK 750
>gi|322781255|gb|EFZ10173.1| hypothetical protein SINV_12884 [Solenopsis invicta]
Length = 884
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 288/767 (37%), Positives = 436/767 (56%), Gaps = 70/767 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTL---------- 50
MP I I V FPF+ Y QL YM+KVI+ LQN + +LESPTGTGKTL
Sbjct: 1 MPEITINDIVVNFPFKPYPVQLEYMKKVIECLQNSQHGVLESPTGTGKTLSLLCSSLSWL 60
Query: 51 --------CLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
+ A +K LG + N + + ++ QS + I+Y SR
Sbjct: 61 LTKKAQLQAQMIAGAIEKKDLGGH--FFKHLTNGLEKAVGLPDNVQSFGWSMAKIIYASR 118
Query: 103 THSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRR 161
THSQL Q + ELK ++Y+ +LGSR+QLCIH EVS + + N K +R
Sbjct: 119 THSQLSQAMHELKRTSYKHVATTVLGSRDQLCIHPEVS--KETNTFNKIHMCHSKVKSRT 176
Query: 162 CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
C +++ V + K++P +E +DIEDLV +G+ CPYF+T+EL++ DIVF PYNYL+
Sbjct: 177 CFYYNNV-EARKDDPVFKEEVLDIEDLVKLGQKHKCCPYFLTKELKQNADIVFMPYNYLL 235
Query: 222 DPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
DP R+ G++ +N++++ DEAHN+E +C +AAS +SS + CI E + + +
Sbjct: 236 DPKTRRSQGIDLQNTVVLLDEAHNVEKVCEEAASLQISSTDIAMCIDEVTSVMQDMAKNS 295
Query: 282 GQSSDETLNPDN---------FAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLA 332
Q S + L+ +N +L+A+ L+LEK I + + + G T PG +I+ELL
Sbjct: 296 DQQSFDFLSENNVQKDFTAEDLCLLKAMFLELEKAIDSIELKNSSEGNTFPGGFIFELLE 355
Query: 333 DLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY 392
+ +T +I+ +E L + + ++ S++L+ +F + G + + +
Sbjct: 356 KVELTHGKEQIVIEKLEKIILYLTTTS-TSPFARKGNALQKFSDLLRTVF-NSGASIARH 413
Query: 393 -------YRVHVR--EADAN-AADVLKGKA-----SRTLSWWCFNPGIAMQEFSRLEVGS 437
Y+VH++ E N DV + K + +S+WCF+PG M++ + S
Sbjct: 414 REKVKRCYKVHIQIEEQKKNYKNDVWESKKMTKTDGKLISYWCFSPGFGMEQMVEQGIRS 473
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
++LTSGTLSP+ SF EL + +++ENPH++T Q+ GI+ GP + LNSSY R+
Sbjct: 474 VVLTSGTLSPLKSFISELGIPIAVQLENPHIVTKGQVCVGILSQGPDNHPLNSSYNTRND 533
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
+Y LG T+ N + IVP GLLIFFPSY +M +C W+N +W +I +
Sbjct: 534 PKYIASLGRTVYNFSCIVPHGLLIFFPSYPIMKKCRDEWQNMG------LWTQIAE---- 583
Query: 558 VVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
+P F + +Y K++D S GAVF AVCRGKVSEGLDFA+ GRAV+I G+PF
Sbjct: 584 --QPNSKEGFVNVMNEYYQKIRDPSCKGAVFMAVCRGKVSEGLDFANANGRAVLIIGLPF 641
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
+ DP+V LK+ YL+ E K T+ L+G++WY +ASRAVNQA+GR+IRH+
Sbjct: 642 PPLKDPRVMLKQRYLE--------EIKTTEKESLTGQEWYQLEASRAVNQAIGRIIRHKS 693
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
DYGA+I CD RF +P+ K Q+S W++P+I+ ++ FG + L FF+
Sbjct: 694 DYGAVILCDCRFENPNFKKQLSTWLRPYIKKFTNFGMITKELRDFFK 740
>gi|167526369|ref|XP_001747518.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773964|gb|EDQ87598.1| predicted protein [Monosiga brevicollis MX1]
Length = 1029
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/755 (36%), Positives = 407/755 (53%), Gaps = 112/755 (14%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP K++GI+V FPFE PT + + CL C
Sbjct: 1 MPVLKLQGIEVSFPFE--------------------------PTWSRVSSCLFCEA---- 30
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTS----RTHSQLRQVIQELKT 116
S +P I R L Q ++ELK
Sbjct: 31 ----------------------------RHTSPMPDITVNKPDELRAELLLSQTVKELKN 62
Query: 117 SNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRR-CNHHSRVADYMKN- 174
++YR + +LGSR+QLC+H EV + + N A +CK N C+ + V ++
Sbjct: 63 TDYRARSAVLGSRDQLCVHPEVKTI---SSNAAKTRVCKIRVNAHDCSFYQNVDPVFRDV 119
Query: 175 ------NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
NPH +D+EDLV +G CPYF++R +Q D++ PYNYLID R
Sbjct: 120 DADLATNPHPA---LDLEDLVQLGERRHACPYFLSRSMQSGADVILLPYNYLIDKQTRAS 176
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDET 288
G++ +++IFDEAHN+E C +AASFDL+S L ++E + ++ R +
Sbjct: 177 QGIDLNGAVVIFDEAHNIESSCEEAASFDLTSADLAGFLTEIDQLLRVADADRPE----- 231
Query: 289 LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIV 348
L+ D +L+ +L LE + + + K GF G Y+Y+ A+ I+ T + L +++
Sbjct: 232 LSEDRLLLLKKAVLDLEAALDRIEL--KNGGFKAKGDYMYQFFAEAGISSTTHHDLSELL 289
Query: 349 E-VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAH----SAYYRVHVREAD-- 401
E LLQ Q +T C + ++LK+ F D +Y VHV E
Sbjct: 290 EQCVMTLLQ----QQANATGRCYLSKFQDVLKVAFSDAAKTDPRVLEKFYYVHVEEKANR 345
Query: 402 ---------ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFA 452
+N+ L + RTLS WCF+P AM+ + ++ILTSGTL+P++SF
Sbjct: 346 SSQKKTSDWSNSMQKLDKRTVRTLSLWCFSPAFAMKSLMAEGIKTLILTSGTLAPLNSFK 405
Query: 453 QELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
EL +FP+ +ENPH+IT KQ+WAG++PVGPS L S+Y NR+ YK ELGN++VN +
Sbjct: 406 AELMTDFPVMLENPHIITGKQVWAGVLPVGPSNARLISNYENRNLPAYKNELGNSLVNFS 465
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIE 572
RIVP GLL+FFPSY +M C+ W+ S IW+R+ ++K +VEPR+ F A+
Sbjct: 466 RIVPAGLLVFFPSYGVMASCVEAWQQPSSTG-ACIWDRLSQYKTVIVEPREKHEFVAAMH 524
Query: 573 DYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYL 632
+ K++D + SGA+F AVCRGKVSEGLDFA+ GRAV+ITG+P+ + +P+V LKR+Y+
Sbjct: 525 AFYDKIQDPALSGAIFLAVCRGKVSEGLDFANSNGRAVIITGLPYPAVKEPRVVLKRQYM 584
Query: 633 DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHP 692
D + + + LSG+DWY QA+RAVNQA+GRVIRHR DYGAII D RFA
Sbjct: 585 D--------DACRRRATTLSGQDWYQMQATRAVNQAIGRVIRHRQDYGAIILADSRFADE 636
Query: 693 SRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+++ + W+Q H++ ++KFG+ +LT FFR +
Sbjct: 637 RQRACLPKWLQKHVEVFTKFGEAQRSLTLFFRRAK 671
>gi|312379509|gb|EFR25759.1| hypothetical protein AND_08621 [Anopheles darlingi]
Length = 972
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 282/761 (37%), Positives = 436/761 (57%), Gaps = 94/761 (12%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y I G+ V+FPFE Y Q YM K++Q LQ N LLESPTGTGKTL +LCA+LAW
Sbjct: 1 MPVYDIGGVPVDFPFEPYQVQRDYMSKLLQCLQQSTNGLLESPTGTGKTLSILCASLAW- 59
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ S+S N++++G +K I+Y SRTHSQL Q +QELK S+Y
Sbjct: 60 ----------------LVHSRSHHNATKAGRTK---IIYASRTHSQLSQAMQELKKSSYN 100
Query: 121 -PKMVILGSREQLCIHREVSLLRGSAQNNA-CRFLCK-KGTNRRCNHHSRVADYMKNNPH 177
+ ++LGSR QLCIH +V ++NNA +LCK K R C ++ RV + MK++
Sbjct: 101 YVRAIVLGSRIQLCIHPDVP----KSENNATVTYLCKEKVATRSCVYYRRV-EQMKDSSE 155
Query: 178 LGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
L + PI DIEDLV +G CP+++++E+ + DI+F PYNYL+D RK +E +NS
Sbjct: 156 LANVPILDIEDLVTVGSRTKACPFYLSKEMVERADIIFMPYNYLLDAKARKANNLELQNS 215
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID-------ISSTRRGQSSDETL 289
++I DEAHN+E +C D+ S LSS + I + + ++ ++ ++ +
Sbjct: 216 VIILDEAHNVERMCEDSGSAVLSSTDIALAIEDVSHVMETMGESASVAGLAETENEKKEF 275
Query: 290 NPDNFAILRALLLKLEKRIAEV--PINSKELGFTKPGPYIYELLADLNITQETAYKLIDI 347
+ ++L+ LL LEK + ++ P + +E+ F + A I
Sbjct: 276 SLHELSLLKQQLLDLEKSVDDIAFPASQREVHFHNVSGVVSLFGA--------------I 321
Query: 348 VEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY----YRVHV------ 397
L + + + + S ++++S+ L+I++ +G + A ++V+V
Sbjct: 322 TGYLTTLSERNSFKRRGSG----LQAVSDFLEIVYAGQGEEYIAAVRRCFKVYVVAEEPK 377
Query: 398 ------READA------NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTL 445
+ AD AA +++ + +WCFNPG M++ + V SI+LTSGTL
Sbjct: 378 QTKRNFKRADGWTATNQPAAHAPLKSSAKIVHFWCFNPGFGMRQLASRGVRSIVLTSGTL 437
Query: 446 SPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELG 505
+P+ EL ++ P+ +ENPH+I Q+ ++ G G LL+S Y NR++ +Y + LG
Sbjct: 438 APLTPLINELNISIPVTLENPHIIDRSQVLVRVIAKGSDGQLLSSVYNNRNNPDYIRSLG 497
Query: 506 NTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS 565
T++++ ++P+GLL+FFPSY ++D+C+ W++ +W I K VEPR
Sbjct: 498 RTLLSVCPVIPNGLLVFFPSYTVLDKCVEGWQSGG------LWSEINNRKAIFVEPRTKD 551
Query: 566 LFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKV 625
F ++++ +++DT GA+F AVCRGKVSEGLDFAD GRAV+ITG+PF + DP+V
Sbjct: 552 AFNTTMDEFYQRIQDTQAKGAIFLAVCRGKVSEGLDFADINGRAVLITGLPFPPLHDPRV 611
Query: 626 RLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFC 685
LK+EYL E +L ++G++WY QASRAVNQA+GRVIRHR+DYGAI+ C
Sbjct: 612 VLKKEYL------TSNRTPENRL--ITGDEWYALQASRAVNQAIGRVIRHRNDYGAILLC 663
Query: 686 DERFAHPSRKSQISLWIQPHI--QCYSKFGDVVYTLTRFFR 724
D RF + ++ Q+S W++ H+ +FG V+ L FFR
Sbjct: 664 DARFQNAHQQMQLSSWVRSHLVHDPNQRFGTVIKDLANFFR 704
>gi|452820691|gb|EME27730.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 777
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 296/779 (37%), Positives = 449/779 (57%), Gaps = 98/779 (12%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL-- 63
I G++V FPF+ Y Q YMEKVIQ+LQ +A+LESPTGTGKTLCLLC+TLAWR+S
Sbjct: 4 ILGVEVAFPFQPYPVQRDYMEKVIQALQTSQHAMLESPTGTGKTLCLLCSTLAWRQSFIA 63
Query: 64 ---------GSFSTLGSQVNNQISGSQSSVNSS--------------------------Q 88
G S+L G +SS++ +
Sbjct: 64 KCQLSTISKGQSSSLHHSDAEFFQGLESSLSRAVGKENQRALENDDGATLDDLFQSLGGN 123
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNN 148
G P I+YTSRTHSQL Q I +L+ + YRP +++LGSREQLCIH +VS LRGS QN
Sbjct: 124 QGIQPTPRIIYTSRTHSQLAQAIDQLRKTIYRPSVIVLGSREQLCIHPQVSHLRGSEQNR 183
Query: 149 ACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQK 208
CR LC+ ++ C + + + ++ K + DE +D+ED VN G+ CPY++ +E +
Sbjct: 184 LCRSLCE---SKGCKYRNNLKNFYKYEK-MADEILDLEDWVNFGKKEEICPYYLAKEREP 239
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
T +++F PYNYL+D R+ L +++ N I++FDEAH++E I A+ ASF+L++ LL ACI
Sbjct: 240 TSELIFLPYNYLVDLHLRESLRMDFSNDIILFDEAHHIEDIAANCASFELTTSLLDACIH 299
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV--PINSKELGFTKPGPY 326
+ + + S SS + + D ++L AL L + + +++ EL + +P +
Sbjct: 300 QLQR---VKSKGDNLSSIQQYSQDAVSLLLALFRTLLNDMHHLLDGVSAHELVY-EPS-F 354
Query: 327 IYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKG 386
+++LL+ +N+T +T D E L D Q+ ++ +S SN D
Sbjct: 355 LFQLLSKVNLTPKT----FDAFSSKIEQLFGD--QHSDFESSVDFQSSSN-------DAV 401
Query: 387 TAHSAYYRVHVR--EADANAADVL------KGKASR---TLSWWCFNPGIAMQEFSRLEV 435
Y R+ + E +A + V+ K + +R TLS+WCFNPG+ M++ + V
Sbjct: 402 FTFLKYMRLLFKLSEEEARLSYVVCIYGEQKTEETRRRITLSYWCFNPGVVMKQLVK-GV 460
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
++LTSGTLSP+ EL++ FP+++EN H+I+ Q++ G++ +GPSG +LNSSYRNR
Sbjct: 461 RCLVLTSGTLSPLSFLESELQIPFPIQLENRHIISQHQLFVGMLGLGPSGEVLNSSYRNR 520
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS------HGNLTTIWE 549
I YK+ELG I N + ++P G+L+FFPSY L+ C+ WK S + +IW+
Sbjct: 521 SLISYKRELGRCIYNFSLVIPGGMLVFFPSYQLLMDCVEYWKTYSMQTSDQSKDFVSIWD 580
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
I + K VVE ++ F + Y ++ D+ SG + F VCRG++SEG+DF+D RA
Sbjct: 581 SIYRRKSLVVESKEEKEFQESFRHYQEQV-DSRASGCILFGVCRGRMSEGIDFSDEYARA 639
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V++ G+PF + KV++K+ YL ++ + + WY +A RA+NQA+
Sbjct: 640 VILVGIPFPPLQQRKVKMKQHYLSTVKKN-------------NPQRWYRLEALRAMNQAI 686
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ--CYSKFGDVVYTLTRFFREE 726
GRVIRH D+GAII CDERF PS ++SLW+QP ++ CYS FG + L RFF+ +
Sbjct: 687 GRVIRHEKDFGAIILCDERF--PSMVHELSLWVQPFVKNGCYS-FGALQSELIRFFKNQ 742
>gi|307197478|gb|EFN78712.1| Regulator of telomere elongation helicase 1 [Harpegnathos saltator]
Length = 963
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 294/768 (38%), Positives = 436/768 (56%), Gaps = 68/768 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLC--------- 51
MP I I V FPF+ Y Q YM KVI+ LQN + +LESPTGTGKTL
Sbjct: 1 MPDITINDIIVSFPFKPYSVQEEYMRKVIECLQNGQHGVLESPTGTGKTLSLLCSSLSWL 60
Query: 52 ------LLCATLAW-RKSLGSFSTLGSQVNNQISGSQSSV---NSSQSGDSKLPTILYTS 101
L +A +K LG G+ + SG + + ++ Q+ +P I+Y S
Sbjct: 61 LAKKAQLQAQVIAIEKKDLG-----GNFFKHLTSGLEKAAGVPDNPQNFGWAMPKIIYAS 115
Query: 102 RTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNR 160
RTHSQL Q + ELK ++Y+ +LGSR+QLCIH EVS + N K +R
Sbjct: 116 RTHSQLSQAMHELKRTSYKHIPTAVLGSRDQLCIHPEVS--KEPTTFNKIHMCHSKVKSR 173
Query: 161 RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C + + V + K++P E +DIEDLV G+ CPYF+ +EL+++ DIVF PYNYL
Sbjct: 174 TCFYFNNV-EARKDDPTFRQEVLDIEDLVKAGQKHKCCPYFLAKELKQSADIVFMPYNYL 232
Query: 221 IDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI-DISST 279
+DP RK G++ +N++++ DEAHN+E +C +AAS +SS + CI E + DIS
Sbjct: 233 LDPKTRKSQGIDLQNTVVLLDEAHNVEKVCEEAASLQISSTDVAMCIDEVTGVMRDISKE 292
Query: 280 RRGQSSDETLN-------PDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLA 332
Q+ T N ++ IL+A+ L+LEK I + + ++ G T PG +I+ELL
Sbjct: 293 VELQNDFLTENNVQKDFTAEDLCILKAMFLELEKAIDSIELKNRNEGDTLPGGFIFELLE 352
Query: 333 DLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY 392
+T +++ +E L + + ++ S++LK F + G + + +
Sbjct: 353 KAQLTHGKEQIVVEKLEKIILYLTTIS-TSPFTRKGNALQKFSDLLKTAF-NSGISVARH 410
Query: 393 -------YRVHVR--EADAN-AADVLKGKA------SRTLSWWCFNPGIAMQEFSRLEVG 436
Y+VH++ E N DV + K + +S+WCF+PG MQ+ V
Sbjct: 411 KEKVMRCYKVHIQIEEQKKNYKNDVWESKKTTTKTDGKLISYWCFSPGFGMQQMVEQGVR 470
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
S++LTSGTLSP+ F EL + +++ENPH++T +Q+ G++ GP + LNSSY R+
Sbjct: 471 SVVLTSGTLSPLKPFISELGIPIAVQLENPHIVTKEQVCVGVLSQGPDNHPLNSSYNTRN 530
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
+Y LG T+ N + IVP GLLIFFPSY +M +C W+N +W +I + K
Sbjct: 531 DPKYIASLGRTLYNFSCIVPHGLLIFFPSYPIMRKCRDEWQNMG------LWTQISERKP 584
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
VEP F + +Y K+KD GA+F AVCRGKVSEGLDFA+ GRAV+I G+P
Sbjct: 585 IYVEPNSKDGFVNVMNEYYQKIKDPLCKGAIFMAVCRGKVSEGLDFANANGRAVLIIGLP 644
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
F + DP+V LK+ YL+ E + T+ L+G++WY +ASRAVNQA+GR+IRH+
Sbjct: 645 FPPLKDPRVMLKQRYLE--------EIRTTEKQGLTGQEWYQLEASRAVNQAIGRIIRHK 696
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+DYGA+I CD RF +P+ K Q+S W++P+I+ ++ FG + L FF+
Sbjct: 697 NDYGAVILCDCRFENPNFKKQLSAWLRPYIKKFTNFGIITKELREFFK 744
>gi|355717481|gb|AES05950.1| regulator of telomere elongation helicase 1 [Mustela putorius furo]
Length = 1114
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/670 (41%), Positives = 397/670 (59%), Gaps = 61/670 (9%)
Query: 92 SKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNAC 150
+ LP I+Y SRTHSQL Q I EL+ ++YRP++ +LGSREQLCIH EV S Q + C
Sbjct: 23 ADLPKIVYASRTHSQLTQAIGELRHTSYRPRVCVLGSREQLCIHPEVKKQESSHMQIHLC 82
Query: 151 RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
R KK +R C+ ++ V + L +DIEDLV G CPY+++R L++
Sbjct: 83 R---KKVASRSCHFYNNVEEKSLER-ELATTILDIEDLVRSGNKHSLCPYYLSRNLKQQA 138
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--- 262
DI+F PYNYL+D R+ G++ K +++IFDEAHN+E +C + ASFDL+ SGL
Sbjct: 139 DIIFMPYNYLLDAKSRRAHGIDLKGTVVIFDEAHNVEKMCEETASFDLTPHDLASGLDVL 198
Query: 263 ------LTACISEAKNCIDISSTRRGQSSDETLNPD--NFAILRALLLKLEKRIAEVPIN 314
T + + +D S+ ++D L+ + + A L+ +LL+LE I V +
Sbjct: 199 DQLLEEQTKAAQQGELHVDFST-----AADPGLHLELQDIAKLKTILLRLEGAIDAVELP 253
Query: 315 SKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESI 374
G TKPG YI+EL A+ IT +T ++D ++ +++Q + T+ ++ +
Sbjct: 254 GNHSGVTKPGSYIFELFAEAQITLQTKGCILDSLD---QIIQHLAGRAGPWTSTAGLQKL 310
Query: 375 SNILKIIFRDK----------GTAHSAYYRVHVR-----EADANAADVLKGKASR----T 415
S+I++I+F G S Y+VH+ + A +D A+R
Sbjct: 311 SDIIQIVFTADPAEGVPGSMVGPGVSQSYKVHIHPDVGHQRKAQRSDAWNSTAARKQGKV 370
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
LS+WCF+PG +MQE R V S+ILTSGTL+P+ S A E+++ FP+ +ENPHVI+ +QIW
Sbjct: 371 LSYWCFSPGHSMQELVRQGVRSVILTSGTLAPVSSLALEMQIPFPVCLENPHVISKQQIW 430
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
GIVP GP G L+S++ R S LG + NIAR+VP GLL+FFPSY +M++ +
Sbjct: 431 VGIVPKGPDGAQLSSAFDKRFSDVCLSSLGKALGNIARVVPHGLLVFFPSYPVMEKSLEF 490
Query: 536 WKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ + R + KPV VEPR F + Y ++ +SGA F AVCRG
Sbjct: 491 WRAHD-------FARKLEALKPVFVEPRSKGGFSEVVGAYYKQVAAPGSSGASFLAVCRG 543
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
K SEGLDFAD GR V++TG+P+ TDP+V LK ++LD + +S GG + LSG
Sbjct: 544 KASEGLDFADMNGRGVIVTGLPYPPRTDPRVVLKMQFLD-ELKSLGGPGGQ----LLSGH 598
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
+WY QQASRAVNQA+GRVIRHRHDYGAI CD RF P ++Q+ W++PH++ Y FG
Sbjct: 599 EWYRQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFTQPDARAQLPSWVRPHVKVYDSFGH 658
Query: 715 VVYTLTRFFR 724
++ + +FFR
Sbjct: 659 IIRDVAQFFR 668
>gi|328719600|ref|XP_001948918.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Acyrthosiphon pisum]
Length = 946
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 282/757 (37%), Positives = 437/757 (57%), Gaps = 54/757 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
M +++ RG+ V+FP+E Y+ Q Y+EKV++ LQN N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MTSFECRGVLVDFPYEPYEVQKRYIEKVLECLQNGHNGVLESPTGTGKTLSLLCSSLAWL 60
Query: 60 ---RKSLGSFSTLGSQVN-----NQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVI 111
+ ++ + ++ N N +G + NS+ +G + P I+Y SRTH+QL QV+
Sbjct: 61 LAKKAAIQANRMCPTESNLTISINTAAGVDKNPNSAWNGVIRPPRIIYGSRTHTQLNQVM 120
Query: 112 QELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCK-KGTNRRCNHHSRVA 169
+EL+ +NY+ K+ I+GSR+QLCIH EV+ S+ A LC+ K + R C ++ V
Sbjct: 121 KELRRTNYKHMKVGIIGSRDQLCIHPEVTKEATSSVKIA---LCRAKVSTRTCQFYNNVE 177
Query: 170 DYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+K+ + I DIEDLVN G+ F CPY+ +RELQK VDI+F PYNY+IDP RK
Sbjct: 178 --LKSKDAFVENGIADIEDLVNKGKKFNCCPYYGSRELQKDVDILFTPYNYIIDPRTRKA 235
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI--------SSTR 280
+++ + ++I DE HN+E +C ++ S D+SS + CI + + ST
Sbjct: 236 QDIQFSDDVIILDEGHNVEKMCEESCSVDISSTDIALCIDAVTDIMKQLYDEKNTEFSTE 295
Query: 281 RGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQET 340
Q + D+ +L+AL L++EK I + + + G YI++LL +IT
Sbjct: 296 PIQLKPREFSDDDICVLKALFLEIEKVIDGIELTNSTNDKKMEGSYIFKLLQGADITPSN 355
Query: 341 AYKLIDIVE-VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTA-----HSAYYR 394
K I + V + + ++ AC + L+ + + GT Y+R
Sbjct: 356 MSKFISFLSSVTLYMSSSNSNAPHQAKEAC-LYKFQQFLECVLQSLGTNGDPKNTDKYFR 414
Query: 395 VHVR------EADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPM 448
+++ + ++ + + K +TL++WCF+PG M++ V IILTSGTLSP+
Sbjct: 415 TYIQLEQSKYKPKNDSIKLKEFKKGKTLNFWCFSPGFGMRDLLDRNVRCIILTSGTLSPL 474
Query: 449 DSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTI 508
+ E+ + ++++N HVI + Q+ ++ GPS L +Y +R++ ++ LG T+
Sbjct: 475 AATISEIGIPVKVQLQNAHVIKNSQVCVSVIKSGPSNKPLICNYTSRNNSDFLTSLGQTL 534
Query: 509 VNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFP 568
VN +RI+P G L+FFPSY +DQC+ W+ + IW I K+K VEP+ +
Sbjct: 535 VNFSRIIPGGTLVFFPSYPFLDQCVNHWQGCN------IWASITKNKSIFVEPKNKDVLN 588
Query: 569 LAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
IE+Y +++ GA+ AV RGKVSEGLDF+D RAV+I G+P+ DP+V +K
Sbjct: 589 SVIEEYYKAIQE--NKGAILLAVYRGKVSEGLDFSDWKARAVIILGLPYPPYQDPRVVMK 646
Query: 629 REYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
REYLD E ++ LSG++WY +A +AVNQA+GRVIRH D+G+IIFCDER
Sbjct: 647 REYLD--------EMRKENSQCLSGQEWYKLEAIKAVNQAMGRVIRHIGDWGSIIFCDER 698
Query: 689 FAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
+A + KSQ+S W+QPHI+ Y +F +FF+E
Sbjct: 699 YASFNIKSQLSAWLQPHIKIYDQFSIAYRENMKFFKE 735
>gi|91080377|ref|XP_975038.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 750
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 276/747 (36%), Positives = 414/747 (55%), Gaps = 53/747 (7%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M T IRG+ V+FPF YD Q YMEKVI L+N+ N +LESPTGTGKTL LLCA+LAW
Sbjct: 1 MTTITIRGVPVKFPFAPYDIQTKYMEKVIDCLENRQNGILESPTGTGKTLSLLCASLAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDS---KLPTILYTSRTHSQLRQVIQELKTS 117
++ + + + DS LP I+Y SRTH+QL Q +QE+K +
Sbjct: 61 EA---------------RREKFAAQPKKCDDSPPITLPRIIYASRTHTQLSQAMQEMKRT 105
Query: 118 NYRP-KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVADYMKNN 175
Y K +LGSR+Q+CI EV + S + N CR K+ ++C ++ R+
Sbjct: 106 AYNHLKACVLGSRDQMCIDPEVIQEKNASFKVNLCRAKVKR---KQCKYYQRIERASHVP 162
Query: 176 PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKN 235
P IDIED+V +GR CPY M REL+ D+VF PYNYL+DP K + VE
Sbjct: 163 PVSDLNIIDIEDVVKLGRECDFCPYHMARELKNRSDVVFMPYNYLLDPRTSKNMDVEIFG 222
Query: 236 SILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFA 295
+I+IFDEAHN+E IC D+ S + S + + + + ++ ++ + + ++
Sbjct: 223 NIIIFDEAHNIEKICEDSVSVQIKSSDVDSAVEDVESVNEVLTKGFVDVENVAFTSEDLQ 282
Query: 296 ILRALLLKLEKRIAEVP-INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAEL 354
+L K + + + + G G YI+E+ I +E + + D++ +
Sbjct: 283 TFSQMLTKFNRELNGIKQFKLTQAGSVFDGDYIFEMFKKAEIFEENSSGISDLIVGVLDF 342
Query: 355 LQEDKLQNKKSTTACRIESISNILKIIFRDKGTAH----SAYYRVHVREADAN------- 403
+ + + ++ +N+L I F +G ++V V +
Sbjct: 343 MSTTSYIQR---SGFGLQIFNNLLFIAFYKQGPEFRQKIKECFKVQVEDERPEYVRRTRY 399
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
+ ++ K R L++WCF+PG AM + +ILTSGTL+P+ EL+L +R+
Sbjct: 400 SQNMDKKNTCRVLNFWCFSPGFAMNMLMDRNIHCVILTSGTLAPLKPLISELELEIGVRI 459
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
ENPH++ Q+ I+ GP LNS++ NR + +Y Q LG I N+ R++PDG+LIFF
Sbjct: 460 ENPHIVKGDQVCVKILSKGPDMEPLNSNFENRSNPKYLQSLGLVISNLIRVIPDGVLIFF 519
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST 583
PSY +M + I W+N W+ I + K +EP+ F A+ +Y AK++D S
Sbjct: 520 PSYVIMQKTIEHWQNDG------TWDSINRTKPIYIEPKDKIEFATAMSEYYAKIQDPSY 573
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
SGA+F VCRGKVSEGLDFAD GRAV ITG+P+ + DPK+ LK++YLD + S+ EY
Sbjct: 574 SGAIFMGVCRGKVSEGLDFADINGRAVFITGLPYPPLKDPKIILKKQYLDFRY-SKNKEY 632
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
L G+DWY+ +A+RA+NQA+GRVIRH+ DYGAII D RF +P K+ +SLW++
Sbjct: 633 -------LKGDDWYSLEATRAINQAIGRVIRHKSDYGAIILLDSRFTNPRIKNNLSLWLR 685
Query: 704 PHIQCYSKFGDVVYTLTRFFRE-ERIC 729
HI FG+++ + FF+ ++ C
Sbjct: 686 QHITDMKNFGEIIRNVRVFFQNAQKFC 712
>gi|223997568|ref|XP_002288457.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975565|gb|EED93893.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 746
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 292/762 (38%), Positives = 433/762 (56%), Gaps = 52/762 (6%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS--- 62
I + V FPF YD Q YM+ V+ +LQ+ +ALLESPTGTGKTLCLLC+ LAW++
Sbjct: 1 INNLQVHFPFRPYDVQTQYMKSVLNALQSSNHALLESPTGTGKTLCLLCSALAWQQGEKA 60
Query: 63 -LGSFSTLGSQVNNQISGSQSSVNSSQSG-----DSKLPTILYTSRTHSQLRQVIQELKT 116
+ + + + Q +G S N +KLP I+Y SRTHSQL QV++ELK
Sbjct: 61 KIRTSGVIATAPTVQPTGGDLSQNDGDGNAPALRTNKLPVIIYASRTHSQLSQVVRELKN 120
Query: 117 SNYRPKMVILGSREQLCIHREVSLL-------------RGSAQNNACRFLCKKGTNRRCN 163
+ YRPK +LGSRE +C+H +V+ L S N+ C L K+ R+C
Sbjct: 121 TRYRPKHAVLGSREHMCVHPKVNPLVAKAKSSANAAPVSSSEVNHGCNKLNKE---RKCM 177
Query: 164 HHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+ + + + + ++P+ D+EDLV +G+ + CP++ TR L K +++F PYNYL D
Sbjct: 178 FRNNLDEVLAGGEY--EQPVLDMEDLVTVGKQYKVCPFYHTRSLIKDAELIFVPYNYLFD 235
Query: 223 PWFRKGL--GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTR 280
R+ V++ N++LIFDEAHNLE ++++SFDLSS + C+ E + I
Sbjct: 236 RDARESTLAEVDFANAVLIFDEAHNLEEFASESSSFDLSSSDIAGCVGEVQRAIQYLELN 295
Query: 281 RGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN-----SKELGFTKPGPYIYELLAD-L 334
+ DN L++L L+ E+ + + + + + + PG YI+ + +
Sbjct: 296 PDMGDGSKMK-DNMLRLKSLFLRFEQYLLDGIMQGNQKMTSQGEVSHPGEYIFHVFREGA 354
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR 394
IT I V +L+ E K N S T +++ + + + + YR
Sbjct: 355 GITHANQAIFISFVRQVGDLIMEFKGNNASSGTP-KLDHFGEWILL-------SSAKSYR 406
Query: 395 VHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQE 454
VHV + D N RT+S+WCF P +AM+E S L+V SI++TSGTLSP+ SF+ E
Sbjct: 407 VHVTKIDGNGGGGFA--GGRTISYWCFAPALAMRELSFLKVRSILITSGTLSPLPSFSLE 464
Query: 455 LKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
L L+FP+++EN HVI S QI+ ++ G SG L+S + RD EY ELGNT+ ++ R
Sbjct: 465 LGLDFPVQLENDHVIQSDQIFVRVLGKGVSGKELSSKFGRRDDPEYILELGNTLGSLCRN 524
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
+P G+L+FFPSY M CI T+ +T W+R+ K V+EPR +S AI ++
Sbjct: 525 IPGGVLVFFPSYSAMYNCIENHFMTT-SETSTPWKRLLTRKAIVIEPRSTSDLSDAIAEF 583
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
+ + G F +CRGKVSEG+DF+D RAVV+TG+PFA DPKV+LKRE+LD
Sbjct: 584 KRFIALPKSPGCFLFGICRGKVSEGIDFSDDMCRAVVVTGLPFAPYLDPKVKLKREFLD- 642
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
++ E S LSG +WYNQQA RAVNQA+GRVIRHR+DYGA++ D RFA S
Sbjct: 643 --AARASEKARPVPSTLSGAEWYNQQAHRAVNQAIGRVIRHRNDYGAVLLLDHRFAQQSN 700
Query: 695 KSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKL 736
+ +S WI+P+++ + G L +F++E + +K+
Sbjct: 701 RDGLSKWIRPYLRDET-VGTATRGLVQFYKESKQKAGERIKI 741
>gi|380006443|gb|AFD29612.1| RTEL1 [Schmidtea mediterranea]
Length = 1057
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 280/778 (35%), Positives = 415/778 (53%), Gaps = 79/778 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I G+ ++FPFE Y CQ++YMEKVI+SL++ NA+LESPTGTGKTLCLLCA LAW+
Sbjct: 1 MPLINICGVSIDFPFEPYACQIIYMEKVIESLKDGKNAILESPTGTGKTLCLLCAALAWQ 60
Query: 61 KSLGSFSTL------------GSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
+ +T G+Q N++ SQ ++ S + +P I+Y+SRTHSQL
Sbjct: 61 DHVKKVTTNSEDEILLHLNSNGNQYWNKLKKSQLNI----SKINVVPKIIYSSRTHSQLS 116
Query: 109 QVIQELKTSNYRPKMV-ILGSREQLCIHREVSLLRGSAQNNACRFLCK-KGTNRRC---N 163
Q I LK + Y + V ++ SREQLCI+ +V L N A + CK + R+C N
Sbjct: 117 QCINALKRTQYCDRKVGMIASREQLCINPKVMNLES---NTAKIYGCKSRVKTRKCFFYN 173
Query: 164 HHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
+ + + + + D IEDL+ IG+ CPYF++RE+ + DI F PYNYL+D
Sbjct: 174 QFEKAKEILSSETKIAD----IEDLLTIGKKKSVCPYFLSREMFDSADITFMPYNYLLDS 229
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID-------- 275
R+ + K +I+IFDEAHN+E +C D+AS L+S + +CI E K +
Sbjct: 230 KIRRLYNINLKGNIVIFDEAHNIEQVCEDSASVQLTSINIASCIEELKVLGEFIYSIQST 289
Query: 276 ---ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPI-NSKELGFTKPGPYIYELL 331
I SDE + L+ L LE + + N+ G T +++LL
Sbjct: 290 DAIIDEADNESRSDEIPDLTQIIHLKQNLCILESEFHSIDLGNNANAGLTVEVNILFQLL 349
Query: 332 ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAH-- 389
ID++E + + +E + +K +F D+
Sbjct: 350 NRCGFKHSNKLHFIDLLEKCSSFIGMSSEPTLTKHGIKGLEKVQEFMKTVFFDEIGEEFD 409
Query: 390 ---------SAYYRVHVREAD-------------ANAADVLKGKASRTLSWWCFNPGIAM 427
SA YRV ++E + +N + G +R LS+WC G M
Sbjct: 410 SIDNLEKKLSACYRVFIQENEIATSNRNNKINWGSNKNQAVNGDKNRVLSFWCMTAGRTM 469
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYL 487
+ + EV SIILTSGTL P+++ ++ + F + + N HVI + Q+ + G G
Sbjct: 470 KSLAGCEVRSIILTSGTLYPIETLKLDMDIKFEVELRNSHVINADQMMVSVCTKGADGEP 529
Query: 488 LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTI 547
LNSSY R+ I Y LGN+I+N+++I+P GLL+ FPSY +M +CI W++ I
Sbjct: 530 LNSSYLTREKISYTNSLGNSILNLSKIIPRGLLVVFPSYGMMRKCIERWESCD------I 583
Query: 548 WERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD-TSTSGAVFFAVCRGKVSEGLDFADHA 606
+ + +HK+ +VEP+ + F LA+E + +K D S G++ +V RGK+SEGLD +DH
Sbjct: 584 YNSMMQHKQLIVEPQDKTKFTLAMEQFYSKNSDPLSNKGSILLSVARGKISEGLDLSDHQ 643
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GR V++ G+P+ +M DP++RLK +LD K K + G WY QQA RAVN
Sbjct: 644 GRGVIVVGLPYPSMMDPRIRLKMSFLD-------DRLKLFKFG-IDGRCWYKQQAYRAVN 695
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
Q++GRVIRH D+GAI DERFA + Q+ LW+Q +I + FGD + FFR
Sbjct: 696 QSIGRVIRHSRDFGAIYLFDERFATADSRFQLPLWLQSNIVISNHFGDAIRNTCNFFR 753
>gi|290987559|ref|XP_002676490.1| predicted protein [Naegleria gruberi]
gi|284090092|gb|EFC43746.1| predicted protein [Naegleria gruberi]
Length = 640
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 267/649 (41%), Positives = 392/649 (60%), Gaps = 41/649 (6%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFL 153
+P I++TSRTHSQL I+ELK S Y P++V++GSREQ CI+ +V L+G Q + C L
Sbjct: 9 IPKIIFTSRTHSQLTHAIKELKKSAYTPEIVVMGSREQSCINPDVISLKGFQQISKCTSL 68
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLV------NIGRTFGPCPYFMTRELQ 207
+ G C +++ K+ E D + + + R F CP+F +RE Q
Sbjct: 69 VRSGG---CKYYTNFTSLKKSGELFTHEKEDEIEDIEDLLEKGLKRCF--CPFFYSREKQ 123
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
K +I+F PYNYLIDP RK + V+ NSI+IFDEAHN++ +CA+A+SFD S+ ++ I
Sbjct: 124 KVAEIIFMPYNYLIDPLLRKKVNVDISNSIIIFDEAHNVQKLCAEASSFDFSTINISKAI 183
Query: 268 SEAKNC--------IDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELG 319
+E + C ID S Q S E L D F + ALL L+ I E+ I E G
Sbjct: 184 AEIEKCRAEMDKLTIDPSDI---QKSTE-LRSDCFDVSSALL-DLDIHIDEMEI--PEEG 236
Query: 320 FTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILK 379
T G IYE+ + +I T + + LQ NKK + + +E + ++
Sbjct: 237 STSTGDSIYEVFSYASIHPSTWETFNEKIRSIITFLQ-----NKKQSCS-GLERVKEAVE 290
Query: 380 IIFRDKGT--AHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGS 437
+F + +Y+V++ + + S+TLS+WCFNPG++MQ ++ S
Sbjct: 291 RVFNEANCEEVFKNFYKVYIYYSKKQPGKDFR--KSKTLSFWCFNPGLSMQNLAKEGPLS 348
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
ILTSGTLSPM+SFA EL L+FP+R+ENPHV+ +QI GP G LNSS+ NR S
Sbjct: 349 FILTSGTLSPMESFAYELGLSFPIRLENPHVVNREQICVMAAQCGPGGTKLNSSFTNRAS 408
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
Y +E+G T++N++++VPDGLL+FFPSY LMDQCI WK S+G + W+ + ++K
Sbjct: 409 EPYLREVGTTLLNLSKVVPDGLLVFFPSYTLMDQCIEIWKK-SNGGAKSTWDSVTQNKTI 467
Query: 558 VVEPRQSSLFPLAIEDYMAKLKDT--STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+ EP++SS I +Y +K+ +T+GA FFAVCRG+VSEGLDF + GR +I G+
Sbjct: 468 ITEPKESSKLNQVIREYEDSIKNRKGNTTGACFFAVCRGRVSEGLDFINRNGRCCMIVGL 527
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PF + D KV+LKR+YLD A+ E K ++G WY Q++SRAVNQA+GR+IRH
Sbjct: 528 PFPPLFDLKVKLKRDYLDETAKRITTENPNAKP--ITGSQWYTQESSRAVNQAIGRIIRH 585
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
R+DYGA++ CDER+A +++ Q+S W+QPH++ +F +V L+ F++
Sbjct: 586 RYDYGAVVLCDERYATQNQRQQLSRWLQPHLKVAGQFSEVNNALSLFYK 634
>gi|195340550|ref|XP_002036876.1| GM12432 [Drosophila sechellia]
gi|229891628|sp|B4I0K4.1|RTEL1_DROSE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194130992|gb|EDW53035.1| GM12432 [Drosophila sechellia]
Length = 966
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 300/788 (38%), Positives = 431/788 (54%), Gaps = 102/788 (12%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE Y Q YMEKVI L++ N +LESPTGTGKTL LLC++LAW
Sbjct: 1 MPESLIAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWI 60
Query: 61 KSLGS-------------FSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQL 107
++ S FS + S+ + ++ + +P ++Y SRTHSQL
Sbjct: 61 RTRQSEHQMQMVKMEKADFSGI-GGGAPGGDLSELAKTMGRANNWGVPKVIYASRTHSQL 119
Query: 108 RQVIQELKTSNY-RPKMVILGSREQLCIHREVSL-LRGSAQNNACRFLCKKGTNRRCNHH 165
Q ++ELK + Y + V+LGSR+QLCIH EV L S + N C+ T C+
Sbjct: 120 TQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMRELGNSNKTNMCKLRVHSKT---CSFQ 176
Query: 166 SRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
RV + K++P L G +DIEDLV +G+ CPYF +REL + I
Sbjct: 177 MRV-ESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELARANKI------------ 223
Query: 225 FRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS 284
E N+I+I DEAHN+E IC + AS + S + I + + + ++ G+S
Sbjct: 224 -------ELGNTIVILDEAHNIEKICEEYASVQIKSSDVAMTIEDITHIRQVFAS--GES 274
Query: 285 SDETLN-PDNFAI-----LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQ 338
D + P +F + L+ +LL+LEK I V +++ G T P +YELL N T
Sbjct: 275 QDMAGDEPKDFTLDDLTLLKEMLLELEKAIDAVVVDNAVDGTTFPASMMYELLGKANFTY 334
Query: 339 ETAYKLIDIVE--VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHS---AYY 393
+I +++ V L+ ++ +K T +S++L I+F +K S A +
Sbjct: 335 GNVASIISLLDKLVQYLLVASQQMSIRKGGT---FTLLSDLLTIVFANKEDVMSKVYASF 391
Query: 394 RVHVREADAN---------------------AADVLKGKASRTLSWWCFNPGIAMQEFSR 432
+VHV ++ AA K ++ +++WCFNPG M++
Sbjct: 392 KVHVLVEESKQGHGKQQGAKQQGGWLGKGTIAAATGSSKVAKIINFWCFNPGFGMEQLLN 451
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
+V S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP L S+Y
Sbjct: 452 TQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNY 511
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
NRD+ +Y LG TI+N+ARIVPDGLL+FFPSY ++++C+ W+ + +W I
Sbjct: 512 ANRDNPKYVSSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASG------LWADIS 565
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K +EPR F +E++ ++D + GAVF AVCRGKVSEGLDFAD GRAV+I
Sbjct: 566 CKKPIFLEPRSKDQFTSTMEEFYQAIRD--SKGAVFMAVCRGKVSEGLDFADRNGRAVII 623
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
TG+PF + DPKV LKR YL + +E +L LSG++WYN A+RAVNQA+GRV
Sbjct: 624 TGLPFPPLKDPKVILKRRYL------EANRTRENQL--LSGQEWYNLDATRAVNQAIGRV 675
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI----QCYSKFGDVVYTLTRFFREERI 728
IRHR+DYGAI+ CD RF S+ Q+S WI+ H+ QC S FG +V L +FF+
Sbjct: 676 IRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDRPQC-SPFGPIVRELRQFFKN--- 731
Query: 729 CGSTNLKL 736
N+KL
Sbjct: 732 -AEANMKL 738
>gi|403369956|gb|EJY84835.1| Isoform 4 of Regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1415
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 286/799 (35%), Positives = 412/799 (51%), Gaps = 113/799 (14%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
++ G V FPF+ Y CQ+ +M KVI+ L NALLESPTGTGKTL LLCA+LAW K
Sbjct: 280 FQTDGHTVYFPFKPYSCQVDFMSKVIKGLNQNENALLESPTGTGKTLSLLCASLAWLKL- 338
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM 123
Q QSGD +P I+YTSRTHSQL QV +EL+ + Y P+
Sbjct: 339 -----------------QREKVGIQSGD--VPRIIYTSRTHSQLAQVQKELRNTAYNPRS 379
Query: 124 VILGSREQLCIHREVSLLRGSAQNNACRFL------CKKGTNRRCNHHSRVADYMKNNPH 177
VILGSR+ LC+H E+ LLRG+A N AC+ C G NR
Sbjct: 380 VILGSRDHLCVHPEIKLLRGNALNLACQKAQKAIDPCIFGKNRDIAL-----------TK 428
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSI 237
L EP DIE+L I CPYF +++ + D++F PYNYLID R+ + +K SI
Sbjct: 429 LSWEPYDIEELHEIATKMIFCPYFASKDRMQGADVIFMPYNYLIDDKIRENFDINYKGSI 488
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETL--NPDNFA 295
+IFDEAHN D ASF+L++ LL E + D RR + + T N ++
Sbjct: 489 IIFDEAHNASSTAEDVASFELNTKLLEQSEFELQKLQD---ERRLRGDEFTFKSNDEDTQ 545
Query: 296 ILRALLLKLEKRIAEVPINS-------------KELGFTKPGPYIYEL------------ 330
L + K + I ++ K+ PG I+E+
Sbjct: 546 NLMYMTKKFREFIDNYELDQTQVKNFRVDKQYLKDASVVMPGREIFEIFRKGTEFQCLDR 605
Query: 331 ------------------------LADLNITQETAYKL-----IDIVEVAAELL------ 355
L D+ Q+ KL DIV+ + L+
Sbjct: 606 VNQQSKMTNIFSEWGRWQQAFDNILNDIQTLQQATTKLQLDIWYDIVKRVSRLMRKAVQK 665
Query: 356 QEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
+++ QN + A + I D+ + ++++ N ++ R
Sbjct: 666 KKNLEQNPGQSKAQETTDDVDDFYIYLFDEEDQQNDQLTFNMKKKRNNRDVFVQKNWMRK 725
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
LS+WCFN GI +E L SIILTSGTLSP++SF EL++ F R+ENPHVI+ +Q+
Sbjct: 726 LSFWCFNAGIGFREIQELLPRSIILTSGTLSPLNSFQAELQIQFNQRLENPHVISPEQVS 785
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
I+ G L N S+ NRD+ +LG +I +IA++ P G+L+FFPSY +M +C
Sbjct: 786 INILTKGVRESLFNFSFNNRDNENTMVDLGMSIASIAQVTPGGMLVFFPSYRVMQRCEEV 845
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL---KDTS-TSGAVFFAV 591
W N + + I KHKK +EP+ S + ++ Y + K T T+GA+ V
Sbjct: 846 WNNQK------VRQHIEKHKKLYMEPKDPSQYQTTMDLYYKSIFSPKPTDKTNGAILMGV 899
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
CRG++SEGLDF+D+A R V++ G+P+ MTD +V LK++YLD + +Q K + L
Sbjct: 900 CRGRISEGLDFSDNAARCVIVVGIPYPQMTDARVILKKDYLDKRL-NQQSRNKNNQYPPL 958
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
SG+DWY+QQA+R+VNQA+GRVIRH DYG+II DER+ + + Q+S W++ I+ ++K
Sbjct: 959 SGKDWYSQQATRSVNQAIGRVIRHVQDYGSIILIDERYNWGTMRGQVSKWLRDRIKLHNK 1018
Query: 712 FGDVVYTLTRFFREERICG 730
D+ + FF E + G
Sbjct: 1019 CSDMQNEMKSFFEEMKTKG 1037
>gi|353232615|emb|CCD79969.1| putative regulator of telomere elongation helicase 1 rtel1
[Schistosoma mansoni]
Length = 1165
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 293/829 (35%), Positives = 427/829 (51%), Gaps = 136/829 (16%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I G++++FP++ YDCQ YM KV+ SL +A+LESPTGTGKTLCLLCA+LAW
Sbjct: 1 MPQIAIDGVEIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLP---------------TILYTSRTHS 105
+ L S + + + +S + D+ L I+Y SRTHS
Sbjct: 61 DKQANSVQLISATDAKHQNTMGKRPTSDNVDNALSHQNFLASLGKVNNGCKIIYASRTHS 120
Query: 106 QLRQVIQELKTSNY-RPKMVILGSREQLCIHREV-SLLRGSAQNNACRFLCKKGTNRRCN 163
QL Q I LK + Y R + ++GSR+QLC+ +V SL SA+ ACR +
Sbjct: 121 QLAQAINALKGTVYSRRSVSVVGSRDQLCLLPDVTSLESNSAKIYACRMRVQ-------- 172
Query: 164 HHSRVADYMKNNPHLGDEP---------IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVF 214
+R +Y +N DE +DIEDL N G+ CPYF++REL+ ++F
Sbjct: 173 --TRTCEYFRNFDSKRDEILTNLKSEGIVDIEDLSNYGQKIKCCPYFISRELKTDSSLIF 230
Query: 215 APYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK--- 271
PYNY++DP R + +N+ +IFDEAHN+E +C DA+S LSS LL + I K
Sbjct: 231 MPYNYVLDPRIRSLYNINLENTTVIFDEAHNIEQVCEDASSVTLSSALLASAIEHVKCVC 290
Query: 272 ------------------NC---------IDISSTRRG--------QSSDETLNPDNFAI 296
NC + + R+G ++ E L+ +
Sbjct: 291 EVVLDHTKEQQEIELSDSNCNVNQNSEQKLSVIMNRKGLFDMTHPEGNAIEALSIEKMIT 350
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
L+ L++LE+ I E +N G TK G I ++ +L I+ + LL
Sbjct: 351 LKGQLIELERLIDE--LNVPPEGLTKDGRVI-----------KSKKRLHCIMRIYFTLLS 397
Query: 357 ED-KLQNKKSTTACRIESISNILKIIF-RDKGTAHSAY----------------YRVHVR 398
D K++ K + +S LK +F G A+ + YR+H++
Sbjct: 398 LDVKIRKTKG-----LHEVSEFLKTVFGYLPGEANVTFNFKTNFKLQHNDSISCYRLHIK 452
Query: 399 EADANAADVLK--------------GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGT 444
+ +A + K G +RT+S+WCF+PG A+Q+ + V IILTSGT
Sbjct: 453 DDILSANNCNKYGKNAWDTQPNTTVGTTNRTISYWCFSPGRAIQQLIQQNVRCIILTSGT 512
Query: 445 LSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
L P++ EL L FP+ + NPHVI Q+ I+P GP G LN++Y R++ Y+ L
Sbjct: 513 LYPVEPIEAELNLKFPITLRNPHVINPDQLNLSIIPRGPDGEKLNATYSVRETSAYRNSL 572
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQS 564
G ++ +A +VP GLLIFFPSY M QCI WK+ ++E++ + K +EPR+
Sbjct: 573 GLLLIQLADVVPAGLLIFFPSYSFMSQCIEYWKDGD------VYEKLSRSKHIFIEPREK 626
Query: 565 SLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+ F +Y ++ GA+ FAV RG+VSEGLD AD+AGR V I G+P+A + DP+
Sbjct: 627 NQFNKIFNEYRKTACIENSVGAILFAVMRGRVSEGLDLADNAGRGVFILGIPYAPIHDPR 686
Query: 625 VRLKREYLD-----LQAQSQGGEYKETKLS-FLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
V LK YLD L++ S + ++T + + +G WYN QA RA+NQAVGRVIRH D
Sbjct: 687 VSLKMAYLDEQFVKLKSNSTHDQLQKTLIDKYPTGRQWYNLQAWRAINQAVGRVIRHYKD 746
Query: 679 YGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
YG I CDERFA + + ++ W+Q + Y+ VV FFR R
Sbjct: 747 YGIIYLCDERFASNNAQLNLAGWMQTKCKVYNNVELVVKDTDEFFRNMR 795
>gi|323454890|gb|EGB10759.1| hypothetical protein AURANDRAFT_62227 [Aureococcus anophagefferens]
Length = 1120
Score = 461 bits (1185), Expect = e-126, Method: Compositional matrix adjust.
Identities = 281/773 (36%), Positives = 407/773 (52%), Gaps = 77/773 (9%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
+R VEFPF+ Y CQL +M+K + ++ +A+LESPTGTGKTLCLL +TLAW K
Sbjct: 117 VRDTPVEFPFDPYACQLDFMDKALGAVDAGTSAILESPTGTGKTLCLLVSTLAWAK---- 172
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVI 125
+ + +Q++ + ++Y SRTH+QL Q ++ L+ S+Y P++ +
Sbjct: 173 ----------RHAPAQTAKADHGGPPPERRAVVYASRTHAQLSQAVKALRASSYAPRVAV 222
Query: 126 LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMK--NNPHLGDEPI 183
+GSRE LC H V LRG+AQN ACR LC R C+ + + +K GD +
Sbjct: 223 IGSREHLCGHSVVKRLRGTAQNKACRALC---AARGCSLRNELDKQLKARKGEDFGDVAL 279
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIE+LV+ G+ G C YF R K D+VFAPYNY++D R G++W+ +I++ DEA
Sbjct: 280 DIEELVDDGKRRGTCAYFGARANLKDADLVFAPYNYVLDERHRATSGIDWRGTIVVLDEA 339
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCIDISS---------TRRGQSSDETLNPDNF 294
HN+ + DAASF+L++ + E +C+D + G E + +
Sbjct: 340 HNVASVAEDAASFELTAADVGGAARELDHCVDALGRMQLKASLDAKDGGLDAELPSEEGL 399
Query: 295 AILRALLLKLEKRIAEV--PINSKELG---FTKPGPYIYELL---ADLNITQETAYKLID 346
L+ ++L LE + V P E G G ++EL+ A L +
Sbjct: 400 LQLKRVVLGLEDALGRVACPTKDPEGGAAYLEDRGGRLHELVLHPAGLTCAAAAEW-FAS 458
Query: 347 IVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------------DKGTAHS 390
+ AA++L D + K+ +A ++E + ++ FR D
Sbjct: 459 GLRGAADVLAGDGDEASKNASA-KLELLERATRLAFRGQLSVPGADAPPAGGDDAKELGD 517
Query: 391 AYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDS 450
AYYRVHV E G A L +WCF+PG+A+ E L S++ SGTLSP+ S
Sbjct: 518 AYYRVHVSEG--------GGDAPAALCYWCFSPGLAVSELLALGARSLLFASGTLSPLPS 569
Query: 451 FAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIV 509
FA EL L P +ENPHVI + Q++A +V V PS L S++ R EYK +LG +
Sbjct: 570 FAAELGLRKPSVLENPHVIDAATQLYAAVVGVAPSARPLKSTWAVRSRPEYKADLGAVVA 629
Query: 510 NIARIVP-DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFP 568
+A VP G+L+FFPSY MD ++ WK T G L I R K + EPR+++
Sbjct: 630 RVAAAVPRGGVLVFFPSYGAMDDALSAWKRT--GVLDDIERR--SGKVVLSEPRKAADMK 685
Query: 569 LAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
I + A + A+ AVCRGKVSEG+DFAD R VV+TG+P+A D KVR K
Sbjct: 686 AVIRSFDAAAAPGAPG-ALLLAVCRGKVSEGMDFADDRCRCVVVTGLPYAPARDRKVRGK 744
Query: 629 REYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
R +LD + K LSG WY+QQA+RAVNQA+GR IRH+ D+GA++ CDER
Sbjct: 745 RSFLD--------DKKRQNRDGLSGGAWYDQQAARAVNQALGRAIRHKGDFGAVLLCDER 796
Query: 689 FAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEV 741
FA +++ +S WI ++ + F + L FFR + G + K E
Sbjct: 797 FASRGKRAMLSKWIDDSLKTPATFQEAEDGLRAFFRGNGLGGGAAVAEAKREA 849
>gi|397614354|gb|EJK62748.1| hypothetical protein THAOC_16627, partial [Thalassiosira oceanica]
Length = 1353
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 300/852 (35%), Positives = 439/852 (51%), Gaps = 142/852 (16%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR---KS 62
I GID+ FPF+ Y+ Q YM VI +LQ +ALLESPTGTGKTLCLLC+ LAW+ KS
Sbjct: 45 INGIDIHFPFQPYNVQHQYMSSVITALQASQHALLESPTGTGKTLCLLCSALAWQIREKS 104
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDS------------KLPTILYTSRTHSQLRQV 110
S G Q + + + QS D K P I+Y SRTHSQL QV
Sbjct: 105 RMSVELEGIQSQQEGKTDELAPGPDQSQDGSDEFSNHSVPRKKAPVIIYASRTHSQLSQV 164
Query: 111 IQELKTSNYRPKMVILGSREQLCIHREVSLL----RGSAQ---------NNACRFLCKKG 157
+ EL+ + YRPK ILGSRE CIH +V+ + +GS NN C LCK+
Sbjct: 165 MGELRNTRYRPKHSILGSREHSCIHPKVNPIVAKGKGSPGVEPKTSTEVNNGCSKLCKE- 223
Query: 158 TNRRCNHHSRVAD-------YMKNNPHLGDE------PI-DIEDLVNIGRTFGPCPYFMT 203
R+C + + D ++ DE P+ DIEDLV +G+ CP++ +
Sbjct: 224 --RKCMFRNNLEDAQGKSGVWLPPTVQRADENKSFEQPVLDIEDLVALGKQHKICPFYHS 281
Query: 204 RELQKTVDIVFAPYNYLIDPWFRKGL--GVEWKNSILIFDEAHNLEGICADAASFDLSSG 261
R K +++ PYNYL D R+ V++ N++LIFDEAHNLE ++++SFDLSS
Sbjct: 282 RSHLKEAELILVPYNYLFDRDARETTLAEVDFSNAVLIFDEAHNLEEFASESSSFDLSSA 341
Query: 262 LLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN------S 315
+ CISE + + ++ DE N +N L+++L+ E + E + S
Sbjct: 342 DIAGCISEVTRGVQLLEMN-PETGDERCNKENLLRLKSMLINFESYLIEGISHRPGQKLS 400
Query: 316 KELGFTKPGPYIYELLAD-LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESI 374
+ ++PG +I+++ + L + E LID+++ ++++ E K N T +++
Sbjct: 401 ADAESSQPGEFIFDIFKEGLRVNGENKTLLIDLIQRLSDVVLEFKGTNTSGTP--KLDHF 458
Query: 375 SNILKIIFRDKGT-----AHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE 429
+ +K F KGT A S YRVH+ + + RT+S+WCF P +AM+E
Sbjct: 459 VSCVKRAF-GKGTFLLALARSKSYRVHISKVNRGGG----FDTGRTISFWCFAPSLAMRE 513
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
+ L V SI++TSGTLSP+ SF+ EL L+FP+++EN HVI QI+ ++ G SG L+
Sbjct: 514 LTFLNVRSILITSGTLSPLPSFSMELGLDFPVQLENDHVIKPDQIFVRVLGKGVSGKELS 573
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN------ 543
S Y RD EY +ELG+T+ ++A +P G+L+FF SY M I W + G+
Sbjct: 574 SKYGRRDDPEYIKELGDTLASLAGNIPAGVLVFFTSYGAMQTAIGRWGGPASGSNQSGGG 633
Query: 544 --------------------------------LTTIWERICKHKKPVVEPRQSSLFPLAI 571
W+R+ K V+EPR +S AI
Sbjct: 634 RGASSFFAARRKKQAATPRYAFPQTNQHFAGPTNNTWQRLLSKKAIVIEPRSTSDLSDAI 693
Query: 572 EDYMAKLKDTSTSGAVFF-------------AVCRGKVSEGLD-------FADHAGRAVV 611
+Y + ++GA+ A + + G+D + D RAVV
Sbjct: 694 GEYKKFIALPKSNGAIMMGARFRKESILRVSAQVSLRAAIGIDAVQFLITYPDDMARAVV 753
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF---------------LSGEDW 656
+TG+PFA DPKV+LKRE+LD A++ T F L G++W
Sbjct: 754 VTGLPFAPYLDPKVKLKREFLD-AARASAKSRPSTDGGFGSGDIKSLPRAPPKSLGGQEW 812
Query: 657 YNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVV 716
Y+QQA RAVNQA+GRVIRHRHDYGA++ D RFA P + +S W++PH++ S G V
Sbjct: 813 YSQQAHRAVNQALGRVIRHRHDYGAVLLLDYRFAEPGNTNGLSKWLKPHLKNES-CGSVS 871
Query: 717 YTLTRFFREERI 728
L +FFRE ++
Sbjct: 872 RGLVQFFRESKM 883
>gi|328772350|gb|EGF82388.1| hypothetical protein BATDEDRAFT_22849 [Batrachochytrium
dendrobatidis JAM81]
Length = 996
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 267/772 (34%), Positives = 416/772 (53%), Gaps = 96/772 (12%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR-- 60
T +I I V+FPF+ Y Q M +I +LQ NAL+ESPTGTGKTLCLLC+TLAWR
Sbjct: 18 TTEINRIAVQFPFQPYPQQNALMTTIINALQKSENALVESPTGTGKTLCLLCSTLAWRST 77
Query: 61 ------KSLGSFSTLGSQVNNQISGSQ-SSVNSSQSGDSKLPTILYTSRTHSQLRQVIQE 113
+++ S + + V +Q+S S++S K P I + SRTHSQL Q I E
Sbjct: 78 YMLWRKEAMRSETERDTLVLDQLSMQAFGSMHSDDRPIGKPPQIFFASRTHSQLSQAISE 137
Query: 114 LKTSNYRPKM-VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM 172
L+ + YR + ++GSR+Q+CI+ V+ ++ + + + C+ + +K T C++H+ ++ +
Sbjct: 138 LRNTAYRNAVCTVVGSRDQMCINPAVAQVKNTLRASLCKSMVQKQT---CSYHAE-SEGL 193
Query: 173 KNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVE 232
N+ +DIEDLV GR CPY+M++ +Q DI+F PYNYL+D R
Sbjct: 194 HNHAAATALIMDIEDLVVFGRERKACPYYMSKAIQPRADIIFLPYNYLVDRNSRNSQNFS 253
Query: 233 WKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPD 292
+NSI+IFDE
Sbjct: 254 LENSIIIFDE-------------------------------------------------- 263
Query: 293 NFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAA 352
A+L L + ++K ++ ++SKEL G YI +L + + +V+
Sbjct: 264 --ALLLNLKINIQKLLSTPRVSSKELE----GSYILKLFGPVELDGVVQNFNSKVVDTCL 317
Query: 353 ELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSA--YYRVHVR----EADANAAD 406
+L D++ KK + + + L+I + HSA +Y ++++ ++D+ +A
Sbjct: 318 GILTYDQIFVKKRQHPSLL-TFKSALRIAVQAANEDHSALSHYMIYIQYTSTKSDSKSAT 376
Query: 407 VL-----KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
K LS+WCFN G+AMQE R++V SI++ SGTLSP+D F+ E+ + FP
Sbjct: 377 HYGFIPDKNNQDILLSFWCFNSGVAMQELKRMKVRSIVVASGTLSPLDGFSDEMGIPFPH 436
Query: 462 RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
R+EN HVI Q++ +V G ++++Y++R++ +E GN I+ A+IVPDG+L+
Sbjct: 437 RLENTHVIDQSQVYISVVTKGSQNIPISTAYKSRETNNSTKEFGNAIIEFAKIVPDGMLV 496
Query: 522 FFPSYYLMDQCIACWKNTSHGNLT-TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD 580
FF SY +M+ CI+ WK S+ ++ +IWE I + K P++E R F LA++ + ++
Sbjct: 497 FFTSYSIMNTCISVWKQPSNDLISKSIWESISELKYPIMESRNQQEFVLAMKSFEERIDQ 556
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD-LQAQSQ 639
+FFA+CRG+VSEG+DF+D GRAVVI G+P+ T DP V LK++YLD A+SQ
Sbjct: 557 KKWPPPIFFAICRGRVSEGIDFSDRKGRAVVIYGIPYPTYKDPNVMLKQKYLDSAAAKSQ 616
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
G + G++WY QQA R+VNQA+GRVIRH++D+GAI+ CDERF +
Sbjct: 617 GR---------IRGKEWYLQQACRSVNQAIGRVIRHKNDFGAILLCDERFQETKTIRNLP 667
Query: 700 LWIQPHIQC---YSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVREL 748
W++ I YS F V + ++ T +LI+ REL
Sbjct: 668 HWLRSSINIPASYSTFSIVYAYICVLVTLQKTFEGTRNQLIEFFKGATNREL 719
>gi|325180138|emb|CCA14540.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 911
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/526 (43%), Positives = 322/526 (61%), Gaps = 23/526 (4%)
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
DI+F PYNYL DP R LG+ +N+ILIFDEAHN+E + +DA S+ S ++AC+SE
Sbjct: 6 DIIFVPYNYLTDPIARTSLGISIENAILIFDEAHNVESVASDAFSYSFSCEDISACVSEI 65
Query: 271 KNCIDISSTRRGQSSDET-LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYE 329
++ + T+R S ET +N ++ +L+ALLL++ K +AE + S G TK G YI+E
Sbjct: 66 QHFVFAVETKRILLSSETQINIESAEMLKALLLEIGKALAEFSL-SPSGGLTKRGEYIFE 124
Query: 330 LLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAH 389
N+T +T +I +E EL Q + + S R++ L +FR + A
Sbjct: 125 FFKRFNVTFKTCPLVISTIEEIIELTQRQGGE-ESSHRNSRLDMFMTFLNTVFRSEKEAQ 183
Query: 390 --SAYYRVHVREADANAADVLK---------GKASRTLSWWCFNPGIAMQEFSRLEVGSI 438
S +YRVH++E A+ K GK +R ++WCF+PG+ Q+ V +I
Sbjct: 184 AISRHYRVHIQETKQRRANTPKLFNSFGNNTGKMTRVFNYWCFHPGLTFQDIRSKNVYNI 243
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTLSP+ + +EL + FP+++EN HVI + Q W G++ G +G LNSSY R +
Sbjct: 244 ILTSGTLSPLKTTIRELGIEFPIQLENKHVIDASQAWVGVLSKGVTGKRLNSSYNYRSTP 303
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
EY ELGNTIVN R P+G+L+FFPSY +++ I+ W+ + TIW RI K K+
Sbjct: 304 EYLSELGNTIVNFVRATPNGILVFFPSYTILEDSISFWQKSP----CTIWIRIAKLKEVF 359
Query: 559 VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFA 618
VEPR + F + +++Y +K GAVFFAVCRG+VSEG+DFA+ GRAVVITG+PF
Sbjct: 360 VEPRNRTEFNVIVDEYHQSIK-VKQEGAVFFAVCRGRVSEGIDFANEKGRAVVITGLPFP 418
Query: 619 TMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
DPK+ LK+ LD ++ ET L+G WY QQASRAVNQA+GRVIRHRHD
Sbjct: 419 PTKDPKIILKKGILDEATVAEN----ETASCKLTGNQWYIQQASRAVNQAIGRVIRHRHD 474
Query: 679 YGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
YGAII CDERF ++ +S W+QP Y +GD +L RFF+
Sbjct: 475 YGAIILCDERFGLSQQQKCLSKWLQPFCYGYKSYGDAHISLMRFFK 520
>gi|324503421|gb|ADY41490.1| Regulator of telomere elongation helicase 1 [Ascaris suum]
Length = 993
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 273/777 (35%), Positives = 417/777 (53%), Gaps = 77/777 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MPT +I I VEFP+E YDCQL+YMEKVI++L+ NA LESPTGTGKTLCLLCAT+A+
Sbjct: 1 MPTLQIGKISVEFPYEPYDCQLLYMEKVIETLKRSFNAALESPTGTGKTLCLLCATIAFT 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
K + S ++ + N Q + S P I+Y SRTHSQL QV++EL + Y+
Sbjct: 61 KEMKSRISVDATANPQ----------GTTPGSLYPKIIYASRTHSQLAQVVRELNKTVYK 110
Query: 121 -PKMVILGSREQLCIHREVSLLRGSAQNN-ACRFLCKKGTNRRCNHHSRVADYMKNNPHL 178
K L SR+ LCI+ V + S CR L K NR+C +++ K++ +
Sbjct: 111 DTKTATLASRDFLCINETVMKEQNSTTKALMCRNLVK---NRKCRYYNEYDRQSKDSLEI 167
Query: 179 -----GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW 233
G P DIED+VNIG+ CP++ TR L D++ PYNY+IDP R+ V
Sbjct: 168 IYNCNGMVP-DIEDIVNIGKKHSVCPFYRTRSLVDEADLLLMPYNYVIDPRLRRMHDVGL 226
Query: 234 KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI--------------SST 279
K +I+IFDEAHNLE IC +A S SS L+ CI E K +++ +
Sbjct: 227 KGNIVIFDEAHNLEAICEEAVSVSFSSKELSGCIRETKTVLEMIMNDEEEVRTKMDNTDA 286
Query: 280 RRGQSSDET------LNPDNFAILRALLLKLEKRIAEVPINSKE-------LGFTKPGPY 326
G S D L ++ A L A+L LE + + N + G G
Sbjct: 287 PFGASDDVVDRSEVHLEKNDVARLLAMLQSLEVVVDGLKKNGQGGRRLNMVEGKVHAGQK 346
Query: 327 IYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKST---TACRIESISNILKIIFR 383
+ ELL I ++ +L +V+ + L + ++ + T ++ ++ + +++
Sbjct: 347 MVELLKTAGIRRDFRDELSLLVDRIGQYLVQKGSSDQGTVFADTGAHLQHFASFVSVVYA 406
Query: 384 DKGTAHSAYYRVHVREA----DANAADVLKGKASR---------TLSWWCFNPGIAMQEF 430
D + ++ +A D +++ K TL++WCF+P +AM+
Sbjct: 407 DGYDPLAPFHEPKNSKAKRFNDQRLTNLMAEKFQLYVTEEGTLVTLNYWCFSPVVAMRYM 466
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNS 490
V SII+TSGTLSP+ +F + L ++ + +EN HV +S Q+ V +G +
Sbjct: 467 HARGVRSIIVTSGTLSPLKAFIEVLGVDMRITLENDHVASSDQVIGACVYGDDNGLAICG 526
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT--TIW 548
S++NR S Y +G+ I I IVP+G+L+FF SY LM+ CI WK +H N+T + W
Sbjct: 527 SFKNRSSDAYLLGVGSVIRRICSIVPEGILVFFSSYVLMNTCIRKWK--AH-NVTGSSPW 583
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
+ + KK VEP+ L + + + +GA FAVCR KVSEG+DF+D R
Sbjct: 584 SEMAQSKKLFVEPKSKVELKLILAQFRESVH--QDNGAALFAVCRAKVSEGIDFSDSESR 641
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
AVV+ G+PFA ++DP+++LK++YL + + + T + +SGE+WY A RAVNQA
Sbjct: 642 AVVVVGVPFAPISDPRIQLKKQYL---CERRVNDKNSTNM--MSGEEWYQVDALRAVNQA 696
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
+GRV+RH+ D+GA++ D RF+ K + S W++ ++ Y G+ +FF++
Sbjct: 697 IGRVLRHKDDFGAVVLVDSRFSAMGPK-RFSSWMRNSLKTYKNVGEFEPLCAKFFKD 752
>gi|391338586|ref|XP_003743639.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Metaseiulus occidentalis]
Length = 1132
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 266/754 (35%), Positives = 408/754 (54%), Gaps = 55/754 (7%)
Query: 5 KIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR---- 60
+IR +++ FPFE Y+ Q YM V++ LQ N LLESPTGTGKTL LLC++LAW
Sbjct: 23 EIRMVNISFPFEPYELQKDYMSAVLECLQKGWNGLLESPTGTGKTLSLLCSSLAWLEDRK 82
Query: 61 ---------KSLGSFSTLGSQVNN--QISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQ 109
+S S S V + ++S +++ +S S D P +LY+SRTHSQL Q
Sbjct: 83 AAMQLNCEFRSAQSXSAYRETVRSLPKLSAAETPTQTSSSFDF-YPQVLYSSRTHSQLSQ 141
Query: 110 VIQELKTSNYR-PKMVILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNHHSR 167
+ELK + YR V+LGSR+QLCI+ EV+ L SAQ C+ L +R C +H
Sbjct: 142 ASRELKRTKYRYMNSVVLGSRDQLCINPEVNGLPNSAQKIRKCQILV---NSRACEYHRN 198
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
+ + + +DIEDLV +G+ CPY+ T+ L+K D+VF PYNY++DP R+
Sbjct: 199 YETKVSHEDFTTNHVVDIEDLVTLGKKHCCCPYYATKILRKKSDVVFVPYNYVVDPSTRR 258
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDE 287
G+ + +I+IFDEAHN+E C D+ SF +SS + + E + + + ++ +
Sbjct: 259 AQGIGLERNIVIFDEAHNIESFCEDSLSFAMSSTDMAGAMKEI-DAVAQNLANSEEADNM 317
Query: 288 TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELL--ADLNITQETAYKLI 345
N ++L+++L +LE R + K G +I E+L ++++ E L+
Sbjct: 318 EFNVAELSVLKSMLGELETRFDKAAETDKHYD----GDFIVEMLQASEIDAQHERITGLL 373
Query: 346 DIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHS-----AYYRVHVREA 400
D + + +Q Q ++ + ++L ++ GTA + H +E
Sbjct: 374 DSL---LKYIQSISSQGPWGPKGIGLQKVLDMLSTVY-SGGTAQELRESFKLFFEHPKEG 429
Query: 401 DANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
V + K L + C PG+ M+ + V S+ILTSGTLSPM + A EL + F
Sbjct: 430 PKEVFVVERKKKKWELHFVCLAPGVRMKSIVQAGVHSVILTSGTLSPMGTLATELGIPFQ 489
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
+++ N H+IT +I VP GP L S+Y+NR S +Y + LG T+ ++R VP G+L
Sbjct: 490 IQLSNDHIITPDKIQVLCVPKGPDNVELISTYQNRSSEKYIRSLGLTLNEMSRRVPHGVL 549
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD 580
+FFPS+ M + W+ I R+ HK + E SS F I+ Y + +
Sbjct: 550 VFFPSFACMKALVEKWEEFG------IMRRLKAHKMLLQEEPGSSSFNSTIQCYRDAVIN 603
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
+ GA+ FAVCRGK SEG+DF+D RAV+I G+P+A D +V+LK +YL+ + S G
Sbjct: 604 NA-QGAMLFAVCRGKSSEGVDFSDEFARAVIIVGIPYAPRQDNRVKLKIDYLN-KYGSDG 661
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL 700
++G WY QA RA+NQA+GRVIRHR+D+G I+F D+RFA SQ+S
Sbjct: 662 ----------MNGNTWYQIQAIRAINQAIGRVIRHRNDFGVILFLDKRFAEQGTISQLSK 711
Query: 701 WIQPHIQCYSKFGDVVYTLTRFFREERICGSTNL 734
W++ + +F + ++ FF+ C S+ L
Sbjct: 712 WVRNRVDTLREFRKAIVGVSSFFQAHNECVSSRL 745
>gi|71660707|ref|XP_822069.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70887462|gb|EAO00218.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 269/764 (35%), Positives = 396/764 (51%), Gaps = 82/764 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + I + V FPF Y Q+ YM VI +L+ +CNALLESPTGTGKTLCLLC+ LAW
Sbjct: 1 MSSIPIGDVGVSFPFNPYPAQVEYMRAVIDALKGRCNALLESPTGTGKTLCLLCSALAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ + Q QI G+ + ++Y SRTH+QL QVI+ELK + Y
Sbjct: 61 EKRNGMT----QQRYQIEGAGRT------------RVIYCSRTHAQLSQVIRELKRTRYG 104
Query: 121 P--KMVILGSREQLCIHREV-SLLRGSAQNNACRFL-----CK--KGTNRRCNHHSRVAD 170
M +LGSRE +C++ +V L AQ + C L C+ +G R +H++ V D
Sbjct: 105 DIFSMSLLGSREHMCVNSQVLRLPTAQAQQSMCNTLREEKNCRFYRGFQARNDHNTAVKD 164
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
G D+EDLV+ GR G CPY+ RE K DIVF PYNY+ D RK L
Sbjct: 165 --------GKWVHDMEDLVSDGRKCGYCPYYSEREEAKEADIVFLPYNYVFDLSIRKQLP 216
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI------SSTRRGQS 284
K SILI DEAHNL + ++ +L LT I + I++ ++ S
Sbjct: 217 FNLKGSILIVDEAHNLPSVLGASSCMNLQPLELTNAIHDCSRAIEMKRILMDTAAADDNS 276
Query: 285 SDETLNPDNFAILRALLLKLEKRIAE--------VPINSKELGFTKPG-------PYIYE 329
D ++ FA L+ +L +LE IAE I+S E+ + PG Y+
Sbjct: 277 QDGLMDEQEFASLKIILCRLESCIAEENQDDEEKKKISSNEVNGSLPGVEIVREGSYMIP 336
Query: 330 LLADLNITQETAYKLI--------DIVEVAAELLQEDKLQNKKSTTACRIESISNILKII 381
L+ IT++ + D++ A +L + + + A + + L +
Sbjct: 337 FLSKALITRDLFFGGNNQNGGGINDVITKAIAVLSQSE------SAALGLSKVQQFLNFV 390
Query: 382 FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILT 441
+ + YR +R A +G R+L +WC + A++ + S++LT
Sbjct: 391 YERCESDDDEAYRFILR----GAKGANRGSNQRSLGYWCLDTSCAVKTLV-AGLNSLLLT 445
Query: 442 SGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
SGTLSP++ FA EL + F + ++ HVI Q+ ++ GPSG LN +Y R+S++Y+
Sbjct: 446 SGTLSPLEHFAAELGIEFGVSLKGAHVIQQNQVLGCVLCKGPSGEKLNGAYAYRNSVDYR 505
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH--GNLTTIWERICKHKKPVV 559
LG ++VNI+R P G+L+FFPSY ++ I W+ S G T+W + K V
Sbjct: 506 VGLGMSLVNISRNTPGGVLVFFPSYVALNAAIDLWRAGSGRPGESLTVWGMLEDLKPVFV 565
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
EP ++S + + ++ + GA+ AVCRGK+SEG+DFAD+ GR VV+ G+PFA
Sbjct: 566 EPVEASDLRTIVSRFQREVDSAPSRGAILLAVCRGKISEGIDFADNHGRCVVVAGIPFAN 625
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
TD VRLKREYL A + + + +G+DWY +A RAVNQ VGRVIRH+ DY
Sbjct: 626 HTDLFVRLKREYLTRVASHR----PKVRGKLFTGDDWYMNEAMRAVNQCVGRVIRHKDDY 681
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
G ++ DERFA R +S W+ Y +F + ++ +FF
Sbjct: 682 GVVLLADERFAE--RLDGLSEWVANRCSIYREFREAYASVAQFF 723
>gi|407849947|gb|EKG04513.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 270/768 (35%), Positives = 398/768 (51%), Gaps = 90/768 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
M + I + V FPF Y Q+ YM VI +L +CNALLESPTGTGKTLCLLC+ LAW
Sbjct: 1 MSSISIADVGVSFPFNPYPAQVEYMRAVIDALNGRCNALLESPTGTGKTLCLLCSALAWL 60
Query: 60 --RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS 117
R+ + +Q QI G+ + ++Y SRTH+QLRQVI+ELK +
Sbjct: 61 EKRRGM-------TQQRYQIEGAGRT------------RVIYCSRTHAQLRQVIRELKRT 101
Query: 118 NYRP--KMVILGSREQLCIHREV-SLLRGSAQNNACRFL-----CK--KGTNRRCNHHSR 167
Y M +LGSRE +C++ +V L AQ + C L C+ +G R +H++
Sbjct: 102 RYGDIFSMSLLGSREHMCVNSQVLRLPTAQAQQSMCNTLREEKKCRFYRGFQARNDHNTA 161
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
V D G D+EDLV+ GR G CPY+ RE K DIVF PYNY+ D RK
Sbjct: 162 VKD--------GKWVHDMEDLVSDGRKCGYCPYYSEREEAKEADIVFLPYNYVFDLSIRK 213
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI------SSTRR 281
L K SILI DEAHNL + ++ +L LT I + I++ ++
Sbjct: 214 QLPFNLKGSILIVDEAHNLPSVLGASSCMNLQPLELTNAIHDCSRAIEMKRILMDTAAAD 273
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE---------------LGFTKPGPY 326
S D ++ FA L+ +L +LE IAE + +E + + G Y
Sbjct: 274 DNSQDGLMDEQEFASLKIILCRLESCIAEENQDDEEKKKMSSHEVTGSLPGVEIVREGSY 333
Query: 327 IYELLADLNITQETAYK--------LIDIVEVAAELLQEDKLQNKKSTTACRIESISNIL 378
+ L+ IT++ + + D++ A +L + + + A + + L
Sbjct: 334 MIPFLSKALITRDLFFGANNQHGGGINDVITKAIAVLSQSE------SAALGLSKVQQFL 387
Query: 379 KIIFRDKGTAHSAYYRVHVREA-DANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGS 437
++ + YR +R AN +G R+L +WC + A++ + S
Sbjct: 388 NFVYERCESDDDEAYRFILRGVKGAN-----RGSNQRSLGYWCLDTSCAVKTLV-AGLNS 441
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
++LTSGTLSP++ FA EL + F + ++ HVI Q+ ++ GPSG LN +Y R+S
Sbjct: 442 LLLTSGTLSPLEHFAAELGIEFGVSLKGAHVIQQNQVLGCVLCKGPSGEKLNGAYAYRNS 501
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH--GNLTTIWERICKHK 555
++Y+ LG ++VNI+R P G+L+FFPSY ++ I W+ S G T+W + K
Sbjct: 502 VDYRVGLGMSLVNISRNTPGGVLVFFPSYVALNAAIELWRAGSGRPGESLTVWGMLEDLK 561
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
VEP ++S + + ++ + GA+ AVCRGK+SEG+DFAD+ GR VV+ G+
Sbjct: 562 PVFVEPVEASDLQTIVSRFQREVDSAPSRGAILLAVCRGKISEGIDFADNHGRCVVVAGI 621
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PFA TD VRLKREYL A + + + +G+DWY +A RAVNQ VGRVIRH
Sbjct: 622 PFANHTDLFVRLKREYLTRVASHR----PKVRGKLFTGDDWYMTEAMRAVNQCVGRVIRH 677
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ DYG I+ DERFA R +S W+ Y +F + ++ +FF
Sbjct: 678 KDDYGVILLADERFAE--RLDGLSEWVANRCSIYREFREAYASVAQFF 723
>gi|71413416|ref|XP_808847.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70873137|gb|EAN86996.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 270/765 (35%), Positives = 397/765 (51%), Gaps = 84/765 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + I + V FPF Y Q+ YM VI +L+ +CNALLESPTGTGKTLCLLC+ LAW
Sbjct: 1 MSSIPIGDVGVSFPFNPYPAQVEYMRAVIDALKGRCNALLESPTGTGKTLCLLCSALAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ + Q QI G+ + ++Y SRTH+QL VI+ELK + Y
Sbjct: 61 EKRHGMT----QQRYQIEGAGRT------------RVIYCSRTHAQLSHVIRELKRTRYG 104
Query: 121 P--KMVILGSREQLCIHREV-SLLRGSAQNNACRFL-----CK--KGTNRRCNHHSRVAD 170
M +LGSRE +C++ +V L AQ + C L C+ +G R H++ V D
Sbjct: 105 DIFSMSLLGSREHMCVNSQVLRLSTAQAQQSMCNTLREEKNCRFYRGFQARNGHNTAVKD 164
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
G D+EDLV+ GR G CPY+ RE K DIVF PYNY+ D RK L
Sbjct: 165 --------GKWVHDMEDLVSDGRKCGYCPYYSEREEAKEADIVFLPYNYVFDLSIRKQLP 216
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI------SSTRRGQS 284
K SILI DEAHNL + ++ +L LT I + I++ ++ S
Sbjct: 217 FNLKGSILIVDEAHNLPSVLGASSCMNLQPLELTNAIHDCSRAIEMKRILMDTAATDDNS 276
Query: 285 SDETLNPDNFAILRALLLKLEKRIAE--------VPINSKELGFTKP-------GPYIYE 329
D ++ FA L+ +L +LE IAE I+S E+ + P G Y+
Sbjct: 277 QDGLMDEQEFASLKIILCRLESCIAEENQGDEEKKKISSHEVTGSLPVVEIVREGSYMIP 336
Query: 330 LLADLNITQETAYK--------LIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKII 381
L+ IT++ + + D++ A +L + + + A + + L +
Sbjct: 337 FLSRALITRDLFFGGNNQHGGGINDVITKAIAVLSQSE------SAALGLSKVQQFLNFV 390
Query: 382 F-RDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIIL 440
+ R + H AY + AN +G R+L +WC + A++ + S++L
Sbjct: 391 YERCESDDHEAYRFILRGAKGAN-----RGSNQRSLGYWCLDTSCAVKTIV-AGLNSLLL 444
Query: 441 TSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY 500
TSGTLSP++ FA EL + F + ++ HVI Q+ ++ GPSG LN +Y R+S++Y
Sbjct: 445 TSGTLSPLEHFAAELGIEFGVSLKGAHVIQQNQVLGCVLCKGPSGEKLNGAYAYRNSVDY 504
Query: 501 KQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH--GNLTTIWERICKHKKPV 558
+ LG ++VNI+R P G+L+FFPSY ++ I W+ S G T+W + K
Sbjct: 505 RVGLGMSLVNISRNTPGGVLVFFPSYVALNAAIDLWRAGSGRPGESLTVWGMLEDLKPVF 564
Query: 559 VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFA 618
VEP ++S + + ++ + GA+ AVCRGK+SEG+DFAD+ GR VV+ G+PFA
Sbjct: 565 VEPVEASDLQTIVSRFQREVDSAPSRGAILLAVCRGKISEGIDFADNHGRCVVVAGIPFA 624
Query: 619 TMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
TD VRLKREYL A + + + +G+DWY +A RAVNQ VGRVIRH+ D
Sbjct: 625 NHTDLFVRLKREYLTRVASHR----PKVRGKLFTGDDWYMNEAMRAVNQCVGRVIRHKDD 680
Query: 679 YGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
YG ++ DERFA R +S W+ Y +F + ++ +FF
Sbjct: 681 YGVVLLADERFAE--RLDGLSEWVANRCSIYREFREAYASVAQFF 723
>gi|240254129|ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1175
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 268/785 (34%), Positives = 405/785 (51%), Gaps = 95/785 (12%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATLA 58
Y+I G+ VEFP++ Y QL +M +VI +L C+ALLESPTGTGK+L LLC+ LA
Sbjct: 27 YQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVLA 86
Query: 59 WRKSLGSFSTLGSQVNN---------------------QISGSQSSVN-----SSQSGDS 92
W+++ S G+ ++ Q S + +S N ++ +
Sbjct: 87 WQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGFIPETQPSDTPASTNVEKAETATKKRT 146
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRF 152
K+PTI Y SRTHSQ+ QVI+E + + YR M +L SR+ C +R V L ++ CR
Sbjct: 147 KIPTIYYASRTHSQITQVIREYRKTGYRVPMAVLASRKHYCTNRHV--LGKDNVDDECRL 204
Query: 153 LCKKGTNRRCNHH---SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKT 209
L K N +C+ +++ + P +E DIEDLV +G+ CPYF + + +
Sbjct: 205 LLKDKANIQCSEFKNVNKITSHPSLQPRGHNEVHDIEDLVKVGKNVRGCPYFASWSMAEN 264
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
+VF PY+Y+++P R G+ V+ K +I+IFDEAHN+E I +A S +L L +E
Sbjct: 265 AQLVFCPYSYIVNPVIRAGVEVDLKGAIIIFDEAHNMEDIAREAGSINLEEDTLFKLQNE 324
Query: 270 AKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK-PGPYIY 328
+ + ++ Q E ++ L+ + ++ + + F+ G
Sbjct: 325 LEQ-MSVAQPMIYQPLCE--------VVEGLISWIGRKKDSLAKRDFQHYFSSWTGDKAL 375
Query: 329 ELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK----KSTTACRIESISNILKIIFRD 384
L + NIT+E L++ A +E ++++ + +E + + L F
Sbjct: 376 RELEESNITRECFPILLECFTKAIRTSKEAEMESDMLYLSGISVLTLEELFSSLTYFFSR 435
Query: 385 KGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGT 444
G+ H Y++ ++ + G + T S WC NP + ++ + + + S+ILTSGT
Sbjct: 436 NGS-HILDYQLGLQRSTKRGDP--SGTWTHTFSLWCMNPAVVFKDLADISL-SVILTSGT 491
Query: 445 LSPMDSFAQELKLNFPLRVENPHVIT-SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQE 503
LSPM+SF+ EL + F +E PHVI + Q+WAG + GPS Y LN+SY+ D+ ++
Sbjct: 492 LSPMNSFSSELGMQFGTSLEAPHVIDPNMQVWAGAISNGPSNYPLNASYKTADAYSFQDA 551
Query: 504 LGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQ 563
LG ++ I IVP G L+FFPSY LM++ W+ T W R+C K VEPR
Sbjct: 552 LGKSLEEICTIVPGGSLVFFPSYKLMEKLCMRWRETEQ------WSRLCLKKDLFVEPRG 605
Query: 564 SSL--FPLAIEDYMAKLK-----------------------DTSTSGAVFFAVCRGKVSE 598
+ F ++ Y ++ D S GA F AVCRGKVSE
Sbjct: 606 GAQDEFDSVLKGYYDSIRGKNKIIGRNRRAKKAGPIKTETQDDSKKGAAFLAVCRGKVSE 665
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G+DFAD RAV+I G+PF + D +V LK++Y D YK +K S L G +WY
Sbjct: 666 GIDFADDNARAVIIVGIPFPNLHDIQVGLKKKYNDT--------YKSSK-SLLGGSEWYC 716
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYT 718
QQA RA+NQA GR IRHR DYGAIIF DER+ ++ IS W++ I+ Y F +
Sbjct: 717 QQAYRALNQAAGRCIRHRFDYGAIIFLDERYKEQRNRASISKWLRQSIKVYDNFEASMEG 776
Query: 719 LTRFF 723
L FF
Sbjct: 777 LRSFF 781
>gi|270006398|gb|EFA02846.1| regulator of telomere elongation helicase 1 [Tribolium castaneum]
Length = 1338
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/651 (36%), Positives = 362/651 (55%), Gaps = 35/651 (5%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLR-GSAQNNACR 151
LP I+Y SRTH+QL Q +QE+K + Y K +LGSR+Q+CI EV + S + N CR
Sbjct: 670 LPRIIYASRTHTQLSQAMQEMKRTAYNHLKACVLGSRDQMCIDPEVIQEKNASFKVNLCR 729
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
K+ ++C ++ R+ P IDIED+V +GR CPY M REL+ D
Sbjct: 730 AKVKR---KQCKYYQRIERASHVPPVSDLNIIDIEDVVKLGRECDFCPYHMARELKNRSD 786
Query: 212 IVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
+VF PYNYL+DP K + VE +I+IFDEAHN+E IC D+ S + S + + + + +
Sbjct: 787 VVFMPYNYLLDPRTSKNMDVEIFGNIIIFDEAHNIEKICEDSVSVQIKSSDVDSAVEDVE 846
Query: 272 NCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP-INSKELGFTKPGPYIYEL 330
+ ++ + + ++ +L K + + + + G G YI+E+
Sbjct: 847 SVNEVLTKGFVDVENVAFTSEDLQTFSQMLTKFNRELNGIKQFKLTQAGSVFDGDYIFEM 906
Query: 331 LADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAH- 389
I +E + + D++ + + + + ++ +N+L I F +G
Sbjct: 907 FKKAEIFEENSSGISDLIVGVLDFMSTTSYIQR---SGFGLQIFNNLLFIAFYKQGPEFR 963
Query: 390 ---SAYYRVHVREADAN-------AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSII 439
++V V + + ++ K R L++WCF+PG AM + +I
Sbjct: 964 QKIKECFKVQVEDERPEYVRRTRYSQNMDKKNTCRVLNFWCFSPGFAMNMLMDRNIHCVI 1023
Query: 440 LTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIE 499
LTSGTL+P+ EL+L +R+ENPH++ Q+ I+ GP LNS++ NR + +
Sbjct: 1024 LTSGTLAPLKPLISELELEIGVRIENPHIVKGDQVCVKILSKGPDMEPLNSNFENRSNPK 1083
Query: 500 YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV 559
Y Q LG I N+ R++PDG+LIFFPSY +M + I W+N W+ I + K +
Sbjct: 1084 YLQSLGLVISNLIRVIPDGVLIFFPSYVIMQKTIEHWQNDG------TWDSINRTKPIYI 1137
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
EP+ F A+ +Y AK++D S SGA+F VCRGKVSEGLDFAD GRAV ITG+P+
Sbjct: 1138 EPKDKIEFATAMSEYYAKIQDPSYSGAIFMGVCRGKVSEGLDFADINGRAVFITGLPYPP 1197
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ DPK+ LK++YLD + S+ EY L G+DWY+ +A+RA+NQA+GRVIRH+ DY
Sbjct: 1198 LKDPKIILKKQYLDFR-YSKNKEY-------LKGDDWYSLEATRAINQAIGRVIRHKSDY 1249
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE-ERIC 729
GAII D RF +P K+ +SLW++ HI FG+++ + FF+ ++ C
Sbjct: 1250 GAIILLDSRFTNPRIKNNLSLWLRQHITDMKNFGEIIRNVRVFFQNAQKFC 1300
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/511 (37%), Positives = 277/511 (54%), Gaps = 44/511 (8%)
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLN------ 290
+L FDE HN+E IC D+AS + S + CI E ++ R S + L+
Sbjct: 1 MLYFDEGHNIEKICEDSASIQIKSADIALCIDE------VTGVMRALSDETILDFNDKEV 54
Query: 291 -----PDNFAILRALLLKLEKRIAEVPINS-KELGFTKPGPYIYELLADLNITQETAYKL 344
PD IL+ + L EK + E+ + + G G YI+E+ I +
Sbjct: 55 PKDFTPDELCILKEIFLNFEKVLDEIEVKAGAPEGTYFEGSYIFEMFNKAGINDGNYNSV 114
Query: 345 IDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY----YRVH--VR 398
+ +++ + L + + ++ S++L I F Y+VH V
Sbjct: 115 LSVMDKIIQFLASGN-EGPFARKGVGLQLFSDLLTIAFSSVSPQFKEKIKRCYKVHIAVE 173
Query: 399 EADANAADVLKGKA-----SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ 453
E AAD KA SR LS+WCF+PG M V +ILTSGTL+P+
Sbjct: 174 EGKKKAADDWLSKATLKTRSRVLSYWCFSPGFGMNMLLDQGVHCVILTSGTLAPLKPLIS 233
Query: 454 ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
EL+LN +R+ENPH++ Q+ I+ GP G LN +Y+NRD+ Y LG ++N+ R
Sbjct: 234 ELELNVGVRIENPHIVKGDQVCVKILTKGPDGEPLNCNYQNRDNPNYLMSLGQVVLNLIR 293
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
I+P G+LIFFPSY +M +C W+ + IW+ I K K VEP+ + F A+ +
Sbjct: 294 IIPHGVLIFFPSYPIMQKCQQYWQESG------IWDGINKIKAIFVEPKDKNSFTFAMSE 347
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y +K+KD + GA+F VCRGKVSEGLDFAD GRAV I G+P+ + DPK+ LK+ YLD
Sbjct: 348 YYSKVKDPNYKGAIFMGVCRGKVSEGLDFADSNGRAVFIIGLPYPPLKDPKIILKKRYLD 407
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ ++ EY L G+DWY+ +A+RA+NQA+GRVIRH++DYGAII D RF +P
Sbjct: 408 V-CNAKDKEY-------LKGDDWYSLEATRAINQAIGRVIRHKNDYGAIILLDSRFTNPR 459
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+ +SLW++ HI+ FG + L FF+
Sbjct: 460 IQGNLSLWLKKHIKIMQNFGALTRDLRLFFQ 490
>gi|154341304|ref|XP_001566605.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063928|emb|CAM40119.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 954
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 265/750 (35%), Positives = 397/750 (52%), Gaps = 61/750 (8%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
+ GI V FPF+ Y Q+ +M V++ LQ+ N LLESPTGTGKTLCLLC+TLAW +
Sbjct: 7 VSGITVSFPFDPYPAQVEFMRSVVECLQHGFNGLLESPTGTGKTLCLLCSTLAWIAA--- 63
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY--RPKM 123
T + SG + + ++Y SRTH+QL QV++EL+ ++Y R M
Sbjct: 64 --TSQDAIFRPTSGREQKGRGMHTHK-----VVYCSRTHAQLTQVVRELRRTSYAQRFTM 116
Query: 124 VILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP 182
+LGSRE +C+++EV+ L S AQN C L + R C + L E
Sbjct: 117 AVLGSREHMCLNKEVTRLPSSQAQNTMCSVL---RSERNCRFFRGLQSAAAGAGLLPPEC 173
Query: 183 I--DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
+ D+EDL+ G G CPYF R+ K D+VF PYNY++DP +K L E +N ILI
Sbjct: 174 VVHDMEDLMREGSRSGFCPYFHERDAAKDADVVFLPYNYILDPLLQKQLPFELRNCILIV 233
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDIS--STRRGQSSDETL--NPDNFAI 296
DEAHNL + + ++ LS +T I + I + +T++ + ++ A
Sbjct: 234 DEAHNLPSVLSSSSCQTLSPLDVTTAIHDCSRAIAMHRLTTKKAELDEDVALEEEQELAS 293
Query: 297 LRALLLKLEKRIAEVPINS-------KELGFTKPGPYIYELLADLNITQE---------- 339
L+ LL +LE + P+ + + G Y++ L IT+E
Sbjct: 294 LKILLSRLEMCLYAEPMEEGMAASTPMQCDMVRNGSYMFAFLEKALITREVFGVQSDSVT 353
Query: 340 TAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE 399
+A L I+ LL E + + +T+ R++ L +F D AH R +++
Sbjct: 354 SASGLTGIMGKCVTLLAESE---RPATSMARVQ---EFLTFVF-DFDPAHLDSTRFVLQQ 406
Query: 400 ADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
++ KA+RTL +W + M++ L + S +LTSGTLSP+D FA EL + F
Sbjct: 407 ------QLVAAKAARTLGFWELDNTRLMRQVV-LPLHSTLLTSGTLSPLDQFAAELGVEF 459
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
+R++ HVI Q+ G++ GPSG LN + R S++Y+ LG ++ NIAR P G
Sbjct: 460 QVRLKGSHVIQPDQVLGGVLCRGPSGEKLNGGFSYRSSVDYRVGLGMSLANIARNTPGGT 519
Query: 520 LIFFPSYYLMDQCIACWKNTS--HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAK 577
L+FFPSY M+ + W+ S G+ T+W + + K VEP S+ P ++ + +
Sbjct: 520 LVFFPSYAAMNSVVELWRAGSGRAGDTKTVWGLLSELKPIFVEPNNSNDLPTIVQGFQKE 579
Query: 578 LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
+ + GA+ AVCRGKVSEG+DFAD+ GR V +TG+P+A TD VRLKREY+ L A
Sbjct: 580 VDTSPLRGAILLAVCRGKVSEGIDFADNHGRCVFVTGIPYANHTDLFVRLKREYITLVAP 639
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
+ + +G+DWY +A RAVNQ +GRVIRH+ DYG ++ DERF S
Sbjct: 640 QRPLVHGRP----FTGDDWYRCEAMRAVNQCLGRVIRHKDDYGVVLLADERFE--GLLSG 693
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+S W++ + +S F + +FF R
Sbjct: 694 VSEWVRRRTRVFSDFRGAYAAVAQFFGARR 723
>gi|407410515|gb|EKF32919.1| helicase, putative [Trypanosoma cruzi marinkellei]
Length = 951
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 267/764 (34%), Positives = 395/764 (51%), Gaps = 82/764 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + I + V FPF Y Q+ YM VI +L +CNALLESPTGTGKTLCLLC+ LAW
Sbjct: 1 MSSIPIGDVGVSFPFNPYPAQVEYMRAVIDALNGRCNALLESPTGTGKTLCLLCSVLAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ + Q Q+ G+ + ++Y SRTH+QL QVI+ELK + Y
Sbjct: 61 EKRHGMT----QQRYQMEGAGRT------------RVIYCSRTHAQLSQVIRELKRTRYG 104
Query: 121 P--KMVILGSREQLCIHREV-SLLRGSAQNNACRFL-----CK--KGTNRRCNHHSRVAD 170
M +LGSRE +C++ +V L AQ + C L C+ +G R H++ + D
Sbjct: 105 DIFSMSLLGSREHMCVNPQVLRLPTAQAQQSMCNTLREEKNCRFYRGFQARNGHNTAMKD 164
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
G D+EDLV+ GR G CPY+ RE K DIVF PYNY+ D RK L
Sbjct: 165 --------GRWVHDMEDLVSDGRKCGYCPYYSEREEAKEADIVFLPYNYVFDLSIRKQLP 216
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI------SSTRRGQS 284
+ K SILI DEAHNL + ++ +L LT I + I + ++ S
Sbjct: 217 FDLKGSILIVDEAHNLPSVLGASSCMNLQPLELTNAIHDCSRAIAMKRILMDTADADDNS 276
Query: 285 SDETLNPDNFAILRALLLKLEKRIAEVP--------INSKELGFTKPG-------PYIYE 329
D ++ FA L+ +L +LE IAE I+S E + PG Y+
Sbjct: 277 QDGLMDEQEFASLKIILCRLESCIAEENQGDEEKKMISSHEATGSLPGVEIVREGSYMIS 336
Query: 330 LLADLNITQETAYK--------LIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKII 381
L IT++ + + D++ A +L + + + A + + L +
Sbjct: 337 FLRKALITRDLFFGGNNQHGGGINDVITKAIAVLSQSE------SAALGLSKVQQFLNFV 390
Query: 382 FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILT 441
+ + YR +R AD +G R+L +WC + A+++ + S++LT
Sbjct: 391 YERCESGDDEAYRFILR--GGKGAD--RGANQRSLGYWCLDTSCAVKKLV-AGLNSLLLT 445
Query: 442 SGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
SGTLSP++ FA EL + F + ++ HVI Q+ ++ GPSG LN +Y R+S++Y+
Sbjct: 446 SGTLSPLEHFAAELGVEFGVSLKGAHVIQQNQVLGCVLCKGPSGEKLNGAYAYRNSVDYR 505
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH--GNLTTIWERICKHKKPVV 559
LG ++VNI+R P G+L+FFPSY ++ I W+ S G T+W + K V
Sbjct: 506 VGLGMSLVNISRNTPGGVLVFFPSYVALNAAIELWRAGSGRPGETLTVWGMLEDLKPVFV 565
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
EP ++S + + ++ + GA+ AVCRGK+SEG+DFAD+ GR VV+ G+PFA
Sbjct: 566 EPVEASDLQTIVSRFQREVDSAPSRGAILLAVCRGKISEGIDFADNHGRCVVVAGIPFAN 625
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
TD VRLKRE+L A + + + +G+DWY +A RAVNQ VGRVIRH+ DY
Sbjct: 626 HTDLFVRLKREHLTRVAPHR----PKVRGKLFTGDDWYMNEAMRAVNQCVGRVIRHKDDY 681
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
G ++ DERFA R +S W+ Y +F + ++ +FF
Sbjct: 682 GVVLLADERFAE--RLDGLSEWVANRCSIYREFREAYASVAQFF 723
>gi|390462826|ref|XP_002747823.2| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Callithrix jacchus]
Length = 1823
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/575 (38%), Positives = 342/575 (59%), Gaps = 49/575 (8%)
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
+DIEDLV G CPY+++R L++ DI+F PYNYL+D R+ ++ K +++I DE
Sbjct: 325 LDIEDLVKSGSRHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHSIDLKGTVVILDE 384
Query: 243 AHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQ----------SSDETLN 290
AHN+E IC ++ASFDL+ L + + ++ + ++G+ SS +
Sbjct: 385 AHNVEKICEESASFDLTPQDLASGLDVIDRVLEEQTKAAQQGEPHPEFSADTPSSGLNME 444
Query: 291 PDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEV 350
++ A L+ +LL+LE I + + G TKPG YI+EL A+ +T +T ++D ++
Sbjct: 445 LEDIAKLKMILLRLEGAIDAIELPGDNSGVTKPGSYIFELFAEAQLTFQTKGCILDSLD- 503
Query: 351 AAELLQEDKLQNKKSTTACRIESISNILKIIFRD----------KGTAHSAYYRVHV--- 397
+++Q + T ++ +++I++I+F +G Y+VH+
Sbjct: 504 --QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEFGPDFLEGLGALRSYKVHIHHD 561
Query: 398 -------READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDS 450
+++DA + + K + LS+WCF+PG +M+E R V ++ILTSGTL+P+ S
Sbjct: 562 AGHWRAAQQSDAWSTTAAR-KPGKVLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPVSS 620
Query: 451 FAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVN 510
FA E+++ FP+ +ENPH+I QIW G+VP GP G L+S++ R S E LG + N
Sbjct: 621 FALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRYSEECLSSLGKALGN 680
Query: 511 IARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPL 569
IAR+VP GLL+FFPSY +M++ + W+ + R + KP+ VEPR F
Sbjct: 681 IARVVPYGLLVFFPSYPVMEKSLEFWRARD-------FARKIEALKPLFVEPRSKGSFSE 733
Query: 570 AIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
I Y ++ ++GA F AVCRGK SEGLDF+D GR V++TG+P+ DP+V LK
Sbjct: 734 TISAYYERVTSPGSTGAAFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKM 793
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
++LD + + QGG + FLSG++WY QQASRAVNQA+GRVIRHR DYGA+ CD RF
Sbjct: 794 QFLD-EMKGQGGAGGQ----FLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRF 848
Query: 690 AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
A ++Q+ W++PH++ Y+ FG V+ + +FFR
Sbjct: 849 AFADARAQLPSWVRPHVRVYNNFGHVIRDVVQFFR 883
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 98/152 (64%), Gaps = 15/152 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKIVLNGVTVDFPFKPYKCQQEYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISG---------SQSSVNSSQSGD-----SKLPTILYTSRTHSQ 106
+ L + ++ ++ G S S ++ GD + +P I+Y SRTHSQ
Sbjct: 61 EHLRD-TISARKIAERLQGELFPDRALSSWGSAAAAADGDPIACYTDVPKIIYASRTHSQ 119
Query: 107 LRQVIQELKTSNYRPKMVILGSREQLCIHREV 138
L QVI EL+ ++YRPK+ +LGSREQLCIH EV
Sbjct: 120 LTQVISELRNTSYRPKVCVLGSREQLCIHPEV 151
>gi|398019061|ref|XP_003862695.1| helicase, putative [Leishmania donovani]
gi|322500925|emb|CBZ36002.1| helicase, putative [Leishmania donovani]
Length = 953
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 262/750 (34%), Positives = 389/750 (51%), Gaps = 61/750 (8%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
+ GI V FPFE Y Q+ +M V++ LQ+ N LLESPTGTGKTLCLLC+TL W +
Sbjct: 7 VSGITVSFPFEPYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLAATSQ 66
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKL-PTILYTSRTHSQLRQVIQELKTSNYRP--K 122
+ L + + + Q G K ++Y SRTH+QL QV++ELK ++Y
Sbjct: 67 GAVL-----------RHTSDQDQKGRGKYNHKVVYCSRTHAQLTQVVRELKRTSYAQCFT 115
Query: 123 MVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE 181
M +LGSRE +C+++EV+ L S AQ+ C L + R C + L E
Sbjct: 116 MAVLGSREHMCLNKEVTRLPSSQAQHAMCSAL---RSERNCRFFRGLLSAAAGASLLSPE 172
Query: 182 PI--DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
D+EDL+ G G CPYF R+ K D+V PYNY++DP K L E + ILI
Sbjct: 173 CAVHDMEDLMREGSRSGFCPYFHERDAAKDADVVLMPYNYVLDPSLHKQLPFELADCILI 232
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS-TRRGQSSDETLNPDN---FA 295
DEAHNL + + + LS +T I + I + T +G DE + ++ A
Sbjct: 233 VDEAHNLPSVLSSSGCQTLSPLDVTTAIHDCSRAIAMHRLTTKGAELDEDVAAEDEQELA 292
Query: 296 ILRALLLKLEKRIAEVPINSKELGFT-------KPGPYIYELLADLNITQETAYKLIDIV 348
L+ LL +LE + P+ T + G Y++ L IT+E D V
Sbjct: 293 SLKILLSRLEMCVYAEPMTEATAAPTPTQCDVVRDGSYMFVFLEKAFITREVFGAQSDGV 352
Query: 349 EVAAEL---------LQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE 399
A+ L L D + +T+ R++ + ++ D AH R +++
Sbjct: 353 TSASGLAGTMGKCVTLLADS--ERPATSMARVQEF--LTRVFAFD--MAHLDSTRFVLQQ 406
Query: 400 ADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
++ KA+RTL +W + M++ L + S++LTSGTLSP+D FA EL + F
Sbjct: 407 ------HLVAAKAARTLGFWELDNTRLMRQVV-LPLHSVLLTSGTLSPLDQFAAELGMEF 459
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
+R++ HVI Q+ G++ GPSG LN + R S++Y+ LG ++ NIAR P G
Sbjct: 460 QVRLKGNHVIQPDQVLGGVLCRGPSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGGT 519
Query: 520 LIFFPSYYLMDQCIACWKNTS--HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAK 577
L+FFPSY M+ + W+ S G+ T+W + + K VEP S+ P ++ + +
Sbjct: 520 LVFFPSYASMNSVVELWQAGSGRAGDTKTVWGMLSELKPIFVEPSNSNDLPTIVQSFQKE 579
Query: 578 LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
+ + GA+ AVCRGK+SEG+DFAD+ GR V++ G+P+A TD VRLKR+Y+
Sbjct: 580 VDTSPLRGAILLAVCRGKISEGIDFADNHGRCVLVAGIPYANHTDLFVRLKRDYI----T 635
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
S + +G+DWY +A RAVNQ VGRVIRH+ DYG ++ DERF
Sbjct: 636 SVAPQRPLVHGKLFTGDDWYRNEAMRAVNQCVGRVIRHKDDYGVVLLADERFE--GLLGS 693
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+S W+Q + +S F + +FF R
Sbjct: 694 VSEWVQRRTRVFSDFRGAYAAVAQFFGGRR 723
>gi|146093363|ref|XP_001466793.1| putative helicase [Leishmania infantum JPCM5]
gi|134071156|emb|CAM69841.1| putative helicase [Leishmania infantum JPCM5]
Length = 953
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 262/750 (34%), Positives = 389/750 (51%), Gaps = 61/750 (8%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
+ GI V FPFE Y Q+ +M V++ LQ+ N LLESPTGTGKTLCLLC+TL W +
Sbjct: 7 VSGITVSFPFEPYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLAATSQ 66
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKL-PTILYTSRTHSQLRQVIQELKTSNYRP--K 122
+ L + + + Q G K ++Y SRTH+QL QV++ELK ++Y
Sbjct: 67 GAVL-----------RHTSDQDQKGRGKYNHKVVYCSRTHAQLTQVVRELKRTSYAQCFT 115
Query: 123 MVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE 181
M +LGSRE +C+++EV+ L S AQ+ C L + R C + L E
Sbjct: 116 MAVLGSREHMCLNKEVTRLPSSQAQHAMCSAL---RSERNCRFFRGLLSAAAGASLLSPE 172
Query: 182 PI--DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
D+EDL+ G G CPYF R+ K D+V PYNY++DP K L E + ILI
Sbjct: 173 CAVHDMEDLMREGSRSGFCPYFHERDAAKDADVVLMPYNYVLDPSLHKQLPFELADCILI 232
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS-TRRGQSSDETLNPDN---FA 295
DEAHNL + + + LS +T I + I + T +G DE + ++ A
Sbjct: 233 VDEAHNLPSVLSSSGCQTLSPLDVTTAIHDCSRAIAMHRLTTKGAELDEDVAAEDEQELA 292
Query: 296 ILRALLLKLEKRIAEVPINSKELGFT-------KPGPYIYELLADLNITQETAYKLIDIV 348
L+ LL +LE + P+ T + G Y++ L IT+E D V
Sbjct: 293 SLKILLSRLEMCVYAEPMTEATAAPTPTQCDVVRDGSYMFVFLEKAFITREVFGAQSDGV 352
Query: 349 EVAAEL---------LQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE 399
A+ L L D + +T+ R++ + ++ D AH R +++
Sbjct: 353 TSASGLAGTMGKCVTLLADS--ERPATSMARVQEF--LTRVFAFD--MAHLDSTRFVLQQ 406
Query: 400 ADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
++ KA+RTL +W + M++ L + S++LTSGTLSP+D FA EL + F
Sbjct: 407 ------HLVAAKAARTLGFWELDNTRLMRQVV-LPLHSVLLTSGTLSPLDQFAAELGMEF 459
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
+R++ HVI Q+ G++ GPSG LN + R S++Y+ LG ++ NIAR P G
Sbjct: 460 QVRLKGNHVIQPDQVLGGVLCRGPSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGGT 519
Query: 520 LIFFPSYYLMDQCIACWKNTS--HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAK 577
L+FFPSY M+ + W+ S G+ T+W + + K VEP S+ P ++ + +
Sbjct: 520 LVFFPSYASMNSVVELWQAGSGRAGDTKTVWGMLSELKPIFVEPSNSNDLPTIVQSFQKE 579
Query: 578 LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
+ + GA+ AVCRGK+SEG+DFAD+ GR V++ G+P+A TD VRLKR+Y+
Sbjct: 580 VDTSPLRGAILLAVCRGKISEGIDFADNHGRCVLVAGIPYANHTDLFVRLKRDYI----T 635
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
S + +G+DWY +A RAVNQ VGRVIRH+ DYG ++ DERF
Sbjct: 636 SVAPQRPLVHGKLFTGDDWYRNEAMRAVNQCVGRVIRHKDDYGVVLLADERFE--GLLGS 693
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+S W+Q + +S F + +FF R
Sbjct: 694 VSEWVQRRTRVFSDFRGAYAAVAQFFGGRR 723
>gi|341883785|gb|EGT39720.1| hypothetical protein CAEBREN_25454 [Caenorhabditis brenneri]
Length = 810
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 263/764 (34%), Positives = 393/764 (51%), Gaps = 66/764 (8%)
Query: 11 VEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLG 70
V+FPFE Y+CQ ++M+ VI L +K +A LESPTGTGKTL LLC+TLAW L
Sbjct: 22 VKFPFEPYECQRIFMKNVIDVLDSKLDAALESPTGTGKTLSLLCSTLAWVNREKETKPLD 81
Query: 71 SQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSR 129
Q SG+ + + + +PTI Y SRTHSQL QV+ EL + Y+ K ILGSR
Sbjct: 82 F-ATWQTSGAGGAGTEDKLKKTFIPTIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSR 140
Query: 130 EQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR----VADYMKNNPHLGDEPID 184
E CI+++V ++ S Q + CR L K R C++H++ D M G E +D
Sbjct: 141 EHFCINQKVKKIKESNRQAHVCRGLVSK---RSCHYHNKFDACTTDKMTEILDTG-EAMD 196
Query: 185 IEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH 244
IED V +G CPY+M+R+ +T +++ PYNY+IDP R+ ++ KNSI+IFDEAH
Sbjct: 197 IEDFVKLGTQNSICPYYMSRQRSETAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAH 256
Query: 245 NLEGICADAASFDLSSGLLTACISEAKNC----IDISSTRRGQSSD-------------- 286
NLE IC AS +LSS + CI E K +D T R ++
Sbjct: 257 NLESICESNASTELSSTSIALCIEELKKVLALLVDEEETARTEADGCMEAFGSQKIDLTK 316
Query: 287 ---ETLNPDNFAILRALLLKLEKRIAEVPINSKEL-------GFTKPGPYIYELLADLNI 336
E L ++ L + LE+ I ++ S +L G G + E+LA
Sbjct: 317 RLIENLKTEDLMALLEKVFLLEEEIDKL-FESDKLKNIPPLDGKASDGEVLLEVLARAGF 375
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYY--- 393
+ + +D++ A L + + +E++++ L I+ +A
Sbjct: 376 DGNSVERFVDVLRDAISYLLSKNEEVSLTEKGDGMETLADFLLSIYSTHAQEIAAAVGDE 435
Query: 394 ------RVHVREADANAADVLK---GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGT 444
R+ ++ N +K G T+ ++CF I+M+ V +++L SGT
Sbjct: 436 SVKLVDRIDLKTVANNCKLYIKKEEGSGKLTIKYFCFQASISMRMLKMRGVRNVLLASGT 495
Query: 445 LSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
LSP+ +F + LNF +EN H + + IV G G L S++NR +I+Y ++
Sbjct: 496 LSPIQAFTYNMGLNFGSILENEHALKQVPVLTSIVTRGKRGG-LTGSFQNRKNIDYVTDV 554
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN--LTTIWERICKHKKPVVEPR 562
G +++ + P G+L+FF SY MD+ +A WK T N L T+WER+ K KK VVEPR
Sbjct: 555 GESLIRVMESTPQGILVFFSSYSQMDELVATWKTTKRPNDSLETLWERMEKSKKVVVEPR 614
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
Y + + GA AVCRGKVSEG+DF D RAV+I G+P+ + D
Sbjct: 615 AKEELAAVRLRYTQGV--SEPHGAALLAVCRGKVSEGIDFCDAESRAVIIVGIPYPPIHD 672
Query: 623 PKVRLKREYL-DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
+V LK+ YL DL + ++ S +DWY +A RAVNQA+GRV+RH++D+G
Sbjct: 673 ERVVLKKMYLDDLMGRKDKTHERQ------SSQDWYQMEAFRAVNQAIGRVLRHKNDFGT 726
Query: 682 IIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
++ D R+A ++ W++ I G + T RFF+E
Sbjct: 727 VVLLDTRYA-SAKPEMFPKWLRSTISRIDSDGCALRT-ARFFKE 768
>gi|389594205|ref|XP_003722349.1| putative helicase [Leishmania major strain Friedlin]
gi|321438847|emb|CBZ12607.1| putative helicase [Leishmania major strain Friedlin]
Length = 953
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/751 (35%), Positives = 390/751 (51%), Gaps = 63/751 (8%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
+ GI V FPF+ Y Q+ +M V++ LQN N LLESPTGTGKTLCLLC+TL W +
Sbjct: 7 VSGITVSFPFDPYPAQVEFMRSVVKCLQNGFNGLLESPTGTGKTLCLLCSTLGWLSATSQ 66
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKL-PTILYTSRTHSQLRQVIQELKTSNY--RPK 122
+ L + + + Q G K ++Y SRTH+QL QV++ELK ++Y R
Sbjct: 67 GAVL-----------RHASDQDQKGRGKHNHKVVYCSRTHAQLTQVVRELKRTSYAQRFT 115
Query: 123 MVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE 181
M +LGSRE +C+++EV+ L S AQ+ C L R C S + L E
Sbjct: 116 MAVLGSREHMCLNKEVTRLPSSQAQHAMCSAL---RLERNCRFFSGLQSAAAGASLLPPE 172
Query: 182 PI--DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
D+EDL+ G G CPYF R+ K D+V PYNY++DP K L E N ILI
Sbjct: 173 CAVHDMEDLMREGSRSGFCPYFHERDAAKDADVVLMPYNYVLDPSLHKQLPFELANCILI 232
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS-TRRGQSSDETLNPD---NFA 295
DEAHNL + + + LS +T I + I + T + DE + + A
Sbjct: 233 VDEAHNLPSVLSSSGCQTLSPLEVTTAIHDCSRAIAMHRITTKKAELDEDMAAEEELELA 292
Query: 296 ILRALLLKLEKRIAEVPI-------NSKELGFTKPGPYIYELLADLNITQETAYKLIDIV 348
L+ LL +LE + P+ + + G Y++ L IT+E D V
Sbjct: 293 SLKILLRRLEMCVYAEPMAEGTATPTPTQCDVVRDGSYMFAFLEKALITREVFGVQSDGV 352
Query: 349 EVAAEL---------LQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE 399
A+ L L D + +T+ R++ + ++ D AH R +++
Sbjct: 353 TSASGLAGTMGKCVTLLADS--ERPATSMARVQEF--LTRVFAFD--MAHLDSTRFVLQQ 406
Query: 400 ADANAADVLKGKASRTLSWWCF-NPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN 458
++ KA+RTL +W N + Q S L S++LTSGTLSP+D FA EL +
Sbjct: 407 ------HLVAAKAARTLGFWELDNTRLMRQVVSPLH--SVLLTSGTLSPLDQFAAELGME 458
Query: 459 FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
F +R++ HVI + Q+ G++ GPSG LN + R S++Y+ LG ++ NIAR P G
Sbjct: 459 FQVRLKGKHVIQADQVLGGVLCRGPSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGG 518
Query: 519 LLIFFPSYYLMDQCIACWKNTS--HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
L+FFPSY M+ + W+ S G+ T+W + + K VEP S+ P ++ +
Sbjct: 519 TLVFFPSYASMNSVVELWRAGSGRAGDTKTVWGMLSELKPIFVEPNNSNDLPTIVQGFQK 578
Query: 577 KLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
++ + GA+ AVCRGK+SEG+DFAD+ GR V++ G+P+A TD VRLKR+Y+ A
Sbjct: 579 EVDTSPLRGAILLAVCRGKISEGIDFADNHGRCVLVAGIPYANHTDLFVRLKRDYITSVA 638
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
+ + + +G+DWY +A RAVNQ VGRVIRH+ DYG ++ DERF
Sbjct: 639 PQRPLVHGKP----FTGDDWYRNEAMRAVNQCVGRVIRHKDDYGVVLLADERFE--GLLE 692
Query: 697 QISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+S W++ + +S F + +FF R
Sbjct: 693 SVSEWVRRRTRVFSDFRGAYAAVAQFFGARR 723
>gi|297850494|ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
gi|297338970|gb|EFH69387.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
Length = 1138
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 263/776 (33%), Positives = 390/776 (50%), Gaps = 91/776 (11%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATLA 58
Y+I G+ VEFP++ Y QL +M +VI +L +ALLESPTGTGK+L LLC+ LA
Sbjct: 27 YQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLA 86
Query: 59 WRKSLGSFSTLGSQVNNQISGSQSSVNSS-QSGDSKLPTILYTSRTHSQLRQVIQELKTS 117
W+KS S G+ +++ S ++ + + + + +PTI Y SRTH+Q+ QVI+E + +
Sbjct: 87 WQKSYKSRFPNGNLTHSRTHPSDNAASCNVEPPEPAIPTIYYASRTHAQITQVIREYRKT 146
Query: 118 NYRPKMVILGSREQLCIHREVSLLRGSAQ-NNACRFLCKKGTNRRCNHHSRVADYM---- 172
YR M +LGSR++ C + V +G + CR L K N +C V +
Sbjct: 147 GYRVPMTVLGSRKRYCTNSHV---QGKENVDEKCRLLLKDKKNIKCAEFKGVGQILAYPS 203
Query: 173 -KNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ N H G DIEDLV IG+T CPYF + ++ + +VF PY+Y+IDP R G+ +
Sbjct: 204 LQQNGHNGVH--DIEDLVKIGKTVTGCPYFASWKMLEVAQLVFCPYSYIIDPVIRGGVNL 261
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNP 291
+ +I+IFDEAHN+E I +A S ++ +L +E + ++ +
Sbjct: 262 Q--GAIIIFDEAHNMEDIAREAGSINMEEDILFKLKNELEQV---------SENEPEIYE 310
Query: 292 DNFAILRALLLKLEKRIAEVPINSKELGFTK-PGPYIYELLADLNITQETAYKLIDIVEV 350
+ ++ L+ + ++ + E F+ G + L + NIT E L
Sbjct: 311 SLYIVVEGLISWIGRKKDSLVKRDSEHYFSNWTGDRALKELKEFNITPENFPNLEACFNQ 370
Query: 351 AAELLQEDKLQNKK----STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAAD 406
A + ++ K + +E + L F G+ Y R A D
Sbjct: 371 AITKSEASEMDPDKPYLSGISVSTLEELFATLTYFFSRNGSHVLDYEMGLQRSAKRGTRD 430
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
+ T S WC NP + ++ + L + SIILTSGTLSPM+SF+ EL + F +E P
Sbjct: 431 ---NGWTHTFSLWCMNPSVVFKDLADLSL-SIILTSGTLSPMNSFSSELGMQFGTCLEAP 486
Query: 467 HVIT-SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
HVI + Q+WAG + GP + LN+SY+ D+ ++ LG ++ I IVP G L+FFPS
Sbjct: 487 HVIDPNMQVWAGAISSGPGNFPLNASYKTADAYAFQDALGKSLEEICSIVPGGSLVFFPS 546
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDY--------- 574
Y LM++ W T W R+C + +EPR + F +++Y
Sbjct: 547 YKLMEKLCTRWHETGQ------WSRLCLKRDFFIEPRGGAKDDFETVLKEYYDSISGNNR 600
Query: 575 --------------MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
+ + +D S G+ F AVCRGKVSEGLDF+D RAV+I G+PF +
Sbjct: 601 SNGRNSRVKKAGSVITEAQDDSKRGSAFLAVCRGKVSEGLDFSDDNARAVIIVGIPFPNL 660
Query: 621 TDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
D V LKR+Y D S+ L G +WY QQA RA+NQA GR IRHR DYG
Sbjct: 661 GDILVELKRKYNDTNKSSK---------KLLGGSEWYCQQAYRALNQAAGRCIRHRFDYG 711
Query: 681 AIIFC-------------DERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
AIIF DER+ P ++ IS W++ I+ Y F + L FF
Sbjct: 712 AIIFLVMIDLRLSCFGVPDERYRQPRNRASISKWLRQSIKVYDNFEASMEGLRYFF 767
>gi|412985226|emb|CCO20251.1| regulator of telomere elongation helicase 1 [Bathycoccus prasinos]
Length = 1313
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/623 (38%), Positives = 342/623 (54%), Gaps = 77/623 (12%)
Query: 183 IDIEDLVNIG-RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK-GLG---VEWKNSI 237
+DIEDLV G R GPCPY++ RE+ + +I+FAPY+Y++D RK LG + W NSI
Sbjct: 294 MDIEDLVKEGKRANGPCPYYLAREMTRGAEIIFAPYSYILDAGVRKRALGDTVMNWHNSI 353
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID----ISSTRRG----------- 282
+IFDEAHN E C +AAS DL++ + I +A I + G
Sbjct: 354 VIFDEAHNAESACEEAASRDLTAVHVANAIKDADAAFQYYSMIEESMEGLSKEEKKDSKK 413
Query: 283 QSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE-------LGFTKPGPYIYELLADLN 335
+ T + ++ LR + LE+ IA V +E L ++ G +I++LLA +N
Sbjct: 414 TGTYPTRSAGDYLTLRGIFAALEREIAIVCAQDQERVRKGETLPSSRDGWFIFDLLAKVN 473
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRV 395
I +T ++I++ E AA ++ + K + A +E + + L F K YR
Sbjct: 474 INMDTYAQMIEVCEDAANVVSMRAEEIGKGSGAG-LERVKDFLDRAFEAKQKGLIECYRS 532
Query: 396 HVREADANAADVLKGK-----------ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGT 444
V + + K T+S+WC PG+ + E L V S++L SGT
Sbjct: 533 RVGPPEEEFSSTWNKKNDDGRENKRLAKGPTMSFWCMVPGVIVNELCELGVKSLLLASGT 592
Query: 445 LSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYL-LNSSYRNRDSIEYKQE 503
LSPMDSFA EL+ FP+R+ENPHVI + +WAG GPS + LNSSYR RD+ +YK E
Sbjct: 593 LSPMDSFASELRAPFPVRLENPHVIPQENVWAGAFLKGPSNAVSLNSSYRFRDTEQYKNE 652
Query: 504 LGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP--VVEP 561
LG I+ +AR+ PDG+L+FFPSY +M +CI WK T+IW I + K VVEP
Sbjct: 653 LGLLILRVARVTPDGVLVFFPSYGVMAKCIEFWKTR-----TSIWNDIARTTKKTLVVEP 707
Query: 562 RQSSLFPLAIEDYMAKLKDTSTS---------------------------GAVFFAVCRG 594
++S F A E + L+ + T+ GA+F AVCRG
Sbjct: 708 KESDAFLEAFESFNKALERSKTNSWSKVGLTNTDGSAKDDETAVTLAAKGGAMFLAVCRG 767
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DFAD AGRAV++TG+P+A +VR KRE+LD + SGE
Sbjct: 768 KVSEGIDFADKAGRAVILTGIPYAPKASARVRYKREFLDAAIMVHKRNNTHQSCNITSGE 827
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
WY+Q A RA NQA+GRVIRH+ D+GA+I DERFA+ + +SQ+SLW++P +Q + F
Sbjct: 828 QWYSQTAMRATNQAIGRVIRHKDDFGAVILADERFAYRNHQSQLSLWLRPAMQTFDTFER 887
Query: 715 VVYTLTRFFREERICGSTNLKLI 737
+ +L+ FF ER CG+ N L+
Sbjct: 888 GIESLSAFF--ER-CGNPNSALM 907
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 26/189 (13%)
Query: 11 VEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK-------- 61
V+FPF E Y Q+V MEK++ +L+ NALLESPTGTGKT+CLLCATLA+ +
Sbjct: 26 VKFPFPEPYPSQIVMMEKILFALREGTNALLESPTGTGKTVCLLCATLAFAEHEEKQRIK 85
Query: 62 -------------SLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
+ + ++ ++ G+ TI+Y SRTHSQL+
Sbjct: 86 QKNTKKKNTKKRKDTEKEEKEEKEEDLELKRTKGVKEEYTGGEPSKVTIVYVSRTHSQLQ 145
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHR---EVSLLRGSAQNNACRFLCKKGTNR-RCNH 164
QVI ELK + Y P+ ++GSR+QLC++ E + G LCK N +C+
Sbjct: 146 QVISELKATEYAPRSSVVGSRKQLCVNEWVAEAAKKMGDGNKRGAEKLCKIACNSGKCDK 205
Query: 165 HSRVADYMK 173
V +M+
Sbjct: 206 KRNVGTHME 214
>gi|256075476|ref|XP_002574045.1| regulator of telomere elongation helicase 1 rtel1 [Schistosoma
mansoni]
Length = 1120
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 271/797 (34%), Positives = 397/797 (49%), Gaps = 117/797 (14%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I G++++FP++ YDCQ YM KV+ SL +A+LESPTGTGKTLCLLCA+LAW
Sbjct: 1 MPQIAIDGVEIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLP---------------TILYTSRTHS 105
+ L S + + + +S + D+ L I+Y SRTHS
Sbjct: 61 DKQANSVQLISATDAKHQNTMGKRPTSDNVDNALSHQNFLASLGKVNNGCKIIYASRTHS 120
Query: 106 QLRQVIQELKTSNY-RPKMVILGSREQLCIHREV-SLLRGSAQNNACRFLCKKGTNRRCN 163
QL Q I LK + Y R + ++GSR+QLC+ +V SL SA+ ACR +
Sbjct: 121 QLAQAINALKGTVYSRRSVSVVGSRDQLCLLPDVTSLESNSAKIYACRMRVQ-------- 172
Query: 164 HHSRVADYMKNNPHLGDE---------PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVF 214
+R +Y +N DE +DIEDL N G+ CPYF++REL+ ++F
Sbjct: 173 --TRTCEYFRNFDSKRDEILTNLKSEGIVDIEDLSNYGQKIKCCPYFISRELKTDSSLIF 230
Query: 215 APYNYLIDPWFRK------------------GLGVEWKNSILIFDEAHNLEGICADAASF 256
PYNY++DP + L + +++++F A+ +CA
Sbjct: 231 MPYNYVLDPRVMRERVCSVGYYVSILLESLFDLLIIRSSTLIVFIRAY----VCAHPI-- 284
Query: 257 DLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV----- 311
LL C+ C G+S++ F +R KL KR +
Sbjct: 285 -----LLITCLYLIFIC--------GRSNNTNGKTPEF--VRENSRKLCKRCIQCFVFIV 329
Query: 312 ----PINSKELGFTKPGPYIY-----------ELLADLNITQETAYKLIDIVEVAAELLQ 356
I+ K +GF P + + D+N+ A + V
Sbjct: 330 YKSSVISHKTIGFHLPISLFFTELLLLSLVVVIVHTDINLIYNIAKQNPSEANVTFNFKT 389
Query: 357 EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTL 416
KLQ+ S + R+ +IL +K + + A + G +RT+
Sbjct: 390 NFKLQHNDSISCYRLHIKDDILSANNCNK----------YGKNAWDTQPNTTVGTTNRTI 439
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWA 476
S+WCF+PG A+Q+ + V IILTSGTL P++ EL L FP+ + NPHVI Q+
Sbjct: 440 SYWCFSPGRAIQQLIQQNVRCIILTSGTLYPVEPIEAELNLKFPITLRNPHVINPDQLNL 499
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
I+P GP G LN++Y R++ Y+ LG ++ +A +VP GLLIFFPSY M QCI W
Sbjct: 500 SIIPRGPDGEKLNATYSVRETSAYRNSLGLLLIQLADVVPAGLLIFFPSYSFMSQCIEYW 559
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKV 596
K+ ++E++ + K +EPR+ + F +Y ++ GA+ FAV RG+V
Sbjct: 560 KDGD------VYEKLSRSKHIFIEPREKNQFNKIFNEYRKTACIENSVGAILFAVMRGRV 613
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD-----LQAQSQGGEYKETKLS-F 650
SEGLD AD+AGR V I G+P+A + DP+V LK YLD L++ S + ++T + +
Sbjct: 614 SEGLDLADNAGRGVFILGIPYAPIHDPRVSLKMAYLDEQFVKLKSNSTHDQLQKTLIDKY 673
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS 710
+G WYN QA RA+NQAVGRVIRH DYG I CDERFA + + ++ W+Q + Y+
Sbjct: 674 PTGRQWYNLQAWRAINQAVGRVIRHYKDYGIIYLCDERFASNNAQLNLAGWMQTKCKVYN 733
Query: 711 KFGDVVYTLTRFFREER 727
VV FFR R
Sbjct: 734 NVELVVKDTDEFFRNMR 750
>gi|342180293|emb|CCC89770.1| putative helicase [Trypanosoma congolense IL3000]
Length = 965
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/771 (33%), Positives = 387/771 (50%), Gaps = 73/771 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + I I+V FPF Y Q+ YM+ V++SL+ NALLESPTGTGKT+CLLCATLAW
Sbjct: 1 MSSIPIDNIEVAFPFSPYTVQVEYMQAVLRSLKGAHNALLESPTGTGKTMCLLCATLAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ ++ ++ + + L ++Y SRTH+QL QVI+E + + Y
Sbjct: 61 EDWRAYCR----------------SNGFNDPTLLRRVVYCSRTHAQLTQVIREFERTRYS 104
Query: 121 P--KMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPH 177
M +LGSR+ +C++ +V L AQ C L ++ R C Y N
Sbjct: 105 SCFSMAVLGSRDHMCVNPQVVRLPSQHAQQKMCSTLREE---RNCRFFRGYQGYSDNKNS 161
Query: 178 LGDE--PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKN 235
L DE D+EDLV G+ G CPYF R+ + DIVF PYNY+ D RK L E
Sbjct: 162 LMDEFWVHDMEDLVKEGQKCGLCPYFYERDKARDADIVFLPYNYVFDTSLRKQLPFELSG 221
Query: 236 SILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD-----ETLN 290
SILI DEAHNL + + +L LT I + + + + D + ++
Sbjct: 222 SILIVDEAHNLPSVLGAVSGMNLQPLDLTNAIHDCSRAMALRKVLMKAAEDSEEQCDLMD 281
Query: 291 PDNFAILRALLLKLEKRIAEVPIN----------SKELGFT--------KPGPYIYELLA 332
A L+ +L LE IA P S +G T + G Y+ L
Sbjct: 282 EQELAALKIILCDLETFIAGEPAQLPDGEDSKKYSHRVGGTGFVEGEIVRRGSYMIPFLK 341
Query: 333 DLNITQETAYKLIDIVEVAAELLQED-KLQNKKSTTACRIESISNILKIIFRDKGTAHSA 391
+IT++ + + E++ + L N+ T + + L +F
Sbjct: 342 KASITRDMFFGEDNAKGGMNEVISKALTLLNQGETAGVGLSKVQQFLTFVFGQC------ 395
Query: 392 YYRVHVREADANAADVLKGKAS------RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTL 445
+ V + +A + G+ + RTLS+WC + +++ S++LTSGTL
Sbjct: 396 ---LEVDDDEACFFIMTSGRGTGDRCSVRTLSYWCMDISRSIKGVVD-STHSLLLTSGTL 451
Query: 446 SPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELG 505
SP+D FA EL ++F +R++ HVI KQ+ A ++ GP G LN SY R Y+ +G
Sbjct: 452 SPLDHFAMELGIHFEVRLKGDHVIEQKQVVASVLCKGPGGERLNGSYAFRCGAGYRGAIG 511
Query: 506 NTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH--GNLTTIWERICKHKKPVVEPRQ 563
T+VNI+ + P G+L+FFPSY M+ + W+ S G TIW + K+K VEP
Sbjct: 512 ATLVNISTLTPGGMLVFFPSYVAMNAAVDLWRTGSGRVGETETIWAALVKNKPVFVEPGN 571
Query: 564 SSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDP 623
+ ++ Y ++ T GA+ AVCRG+ EG+DFADH GR VV+ G+PFA TD
Sbjct: 572 AEDANTVLKSYQQEVDKDPTRGALLLAVCRGRTGEGVDFADHHGRCVVVVGIPFANCTDL 631
Query: 624 KVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
VRLKREY+ A + + +G++WY +A R+V+Q +GRVIRHR+DYGAI+
Sbjct: 632 LVRLKREYITRVATHR----PKVDGKLFTGDEWYVNEAMRSVSQCIGRVIRHRNDYGAIV 687
Query: 684 FCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE-ERICGSTN 733
DERFA R + + W+ + +FG + FF+ R+ G T
Sbjct: 688 LADERFA--DRMNCLPKWVASRCTVHREFGGSYACVADFFKSFRRVKGGTT 736
>gi|401415594|ref|XP_003872292.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488516|emb|CBZ23762.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 953
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 257/746 (34%), Positives = 379/746 (50%), Gaps = 53/746 (7%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
+ GI V FPF+ Y Q+ +M V++ LQ+ N LLESPTGTGKTLCLLC+TL W +
Sbjct: 7 VNGITVSFPFDPYPAQVEFMRSVVKCLQHGFNGLLESPTGTGKTLCLLCSTLGWLAARSQ 66
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLP-TILYTSRTHSQLRQVIQELKTSNYRP--K 122
+ L + + Q G K ++Y SRTH+QL QV++ELK ++Y
Sbjct: 67 GAVL-----------RHPSDQDQKGRGKYSHKVVYCSRTHAQLAQVVRELKRTSYAQCFT 115
Query: 123 MVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE 181
M ILGSRE +C+++EV+ L S AQ+ C L + R C + L
Sbjct: 116 MAILGSREHMCLNKEVTRLPSSQAQHAMCSAL---RSERNCRFFRGLQSAGAGASLLPPA 172
Query: 182 PI--DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
D+EDL+ G G CPYF R+ + D+V PYNY++DP K L E N ILI
Sbjct: 173 CAVHDMEDLMREGSRSGFCPYFHERDAARDADVVLMPYNYILDPSLHKQLPFELANCILI 232
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS-TRRGQSSDETLNPD---NFA 295
DEAHNL + + + LS +T I + I + T + DE + + A
Sbjct: 233 VDEAHNLPSVLSSSGCQTLSPLDVTTAIHDCSRAIAMHRLTAKKAELDEDVAVEEEQELA 292
Query: 296 ILRALLLKLEKRIAEVPI-------NSKELGFTKPGPYIYELLADLNITQETAYKLIDIV 348
L+ LL +LE + P+ + + G Y++ L IT+E D V
Sbjct: 293 SLKILLNRLEMCVYAEPMAEGTAASTPTQCAVVRDGSYMFAFLEKAFITREVFGAQSDGV 352
Query: 349 E----VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANA 404
+A + + L A + + L +F AH R +++
Sbjct: 353 TSESGLAGTMGKCVTLLADSERPATSMARVQEFLTCVFAFD-MAHIDSTRFVLQQ----- 406
Query: 405 ADVLKGKASRTLSWWCF-NPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
++ KA+RTL +W N + Q S L S++LTSGTLSP+D FA EL + F +R+
Sbjct: 407 -HLVAAKAARTLGFWELDNTRLMRQVVSPLH--SVLLTSGTLSPLDQFAAELGMEFQVRL 463
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
+ HVI Q+ G++ GPSG LN + R S++Y+ LG ++ NIAR P G L+FF
Sbjct: 464 KGNHVIQPDQVLGGVLCRGPSGEKLNGGFSFRSSVDYRVGLGMSLANIARNTPGGTLVFF 523
Query: 524 PSYYLMDQCIACWKNTS--HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT 581
PSY M+ + W+ S G+ T+W + + K VEP ++ P ++ + ++ +
Sbjct: 524 PSYAAMNSVVDLWRAGSGRAGDTKTVWGMLSELKPIFVEPNNTNDLPTIVQGFQKEVDTS 583
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
GA+ AVCRGK+SEG+DFAD+ GR V++ G+P+A TD VRLKREY+ S
Sbjct: 584 PLRGAILLAVCRGKISEGIDFADNHGRCVLVAGIPYANHTDLFVRLKREYI----TSVAP 639
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
+ +G+DWY +A RAVNQ VGRVIRH+ DYG ++ DERF +S W
Sbjct: 640 QRPLVDGKPFTGDDWYRNEAMRAVNQCVGRVIRHKDDYGVVLLADERFE--GLLGSVSEW 697
Query: 702 IQPHIQCYSKFGDVVYTLTRFFREER 727
++ + ++ F + +FF R
Sbjct: 698 VRRRTRVFTDFRGAYAAVAQFFGGRR 723
>gi|72386955|ref|XP_843902.1| helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359030|gb|AAX79479.1| helicase, putative [Trypanosoma brucei]
gi|70800434|gb|AAZ10343.1| helicase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 963
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 268/764 (35%), Positives = 384/764 (50%), Gaps = 80/764 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + I G++V FPF Y Q YM VI +L+ NALLESPTGTGKTLCLLC LAW
Sbjct: 1 MSSVFIDGVEVSFPFAPYPVQEEYMRSVIYALKGSHNALLESPTGTGKTLCLLCGVLAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+I +NS S + L ++Y SRTH+QL QVI+E K + Y
Sbjct: 61 D------------ERRIC----FLNSGISDRTSLLRVVYCSRTHAQLSQVIREFKRTRYS 104
Query: 121 P--KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKK-GTNRRCNHHSRVADYMKNNPH 177
M +LGSR+ +C++ +V L S +A R LC + +R C +
Sbjct: 105 SIFSMAVLGSRDHMCLNSQVLQLPSS---HAQRKLCSQLREDRNCRFYRGYEARAAGRKD 161
Query: 178 LGDEPI--DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKN 235
DE D+EDLV+ GR G CPY+ R+ K D+VF PYNY+ D FRK L E
Sbjct: 162 FPDELWIHDMEDLVSEGRKCGFCPYYYERDAAKDADVVFLPYNYVFDVSFRKQLPFELSG 221
Query: 236 SILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDN-- 293
S+LI DEAHNL + A+ +L L I E C + +R S DE N D
Sbjct: 222 SVLIVDEAHNLPSVLGSASCMNLQPLDLANAICE---CSRAMAMQRILSKDEDNNDDTSA 278
Query: 294 ------FAILRALLLKLEKRIAEVP--INSKELGFT-----------------KPGPYIY 328
FA L+ +L LE I P + SKE T + G Y+
Sbjct: 279 VTSEQEFASLKVILCGLEACIVNEPRELPSKEEAETHAGRLDTSGSLTGCEIVRSGSYMI 338
Query: 329 ELLADLNITQETAYKLIDIVEVAAELLQED-KLQNKKSTTACRIESISNILKIIFR--DK 385
L IT + + E++ + + ++ +T + + L +F +
Sbjct: 339 SFLRKAAITHDIFFGDGGEGGFINEVISKALTVLSQSESTGVGLSKVQQFLSFVFERCGE 398
Query: 386 GTAHSAYYRVHVREADANAADVLKGKAS-RTLSWWCFNPGIAMQEFSRLEVGSIILTSGT 444
G S+Y+ + D + G A+ RTLS+WC + +Q ++ S++LTSGT
Sbjct: 399 GDDDSSYFIL----TDGKNTN---GHANPRTLSYWCLDISRVVQSLV-CDLHSLLLTSGT 450
Query: 445 LSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
LSP+ FA EL ++F + ++ HVI KQ+ ++ GP G LN Y R+ ++Y+ L
Sbjct: 451 LSPLSHFAMELGVSFEVCLKGSHVIEEKQVIGSVLCRGPGGERLNGGYAFRNGVDYRIGL 510
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK-NTSHGNLT-TIWERICKHKKPVVEPR 562
G +VNI+RI P G+L+FFPSY ++ + W+ N T T+W + + K VEP
Sbjct: 511 GMALVNISRITPGGILVFFPSYVALNAAVDLWRTGGGRANETETVWAMLEQVKPVFVEPA 570
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
++ + + ++ ST GA AVCRG++SEG+DFAD GR VVI G+PFA TD
Sbjct: 571 AAADAQTIVTSFQREVDANSTRGAFLLAVCRGRISEGIDFADQHGRCVVIAGIPFANHTD 630
Query: 623 PKVRLKREYL---DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
VRLKREY+ + + GG+ +G +WY +A R+VNQ VGRVIRH+ DY
Sbjct: 631 LFVRLKREYITRVSTKRPAVGGKP-------FTGNEWYMNEAMRSVNQCVGRVIRHKDDY 683
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
GA++ DERF R +S W+ +S+F + +FF
Sbjct: 684 GAVVLADERFV--DRLHGLSEWVGSRCTVHSEFRGTYACIAKFF 725
>gi|261327010|emb|CBH09985.1| helicase, putative [Trypanosoma brucei gambiense DAL972]
Length = 963
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 268/764 (35%), Positives = 384/764 (50%), Gaps = 80/764 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + I G++V FPF Y Q YM VI +L+ NALLESPTGTGKTLCLLC LAW
Sbjct: 1 MSSVFIDGVEVSFPFAPYPVQEEYMRSVIYALKGSHNALLESPTGTGKTLCLLCGVLAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+I +NS S + L ++Y SRTH+QL QVI+E K + Y
Sbjct: 61 D------------ERRIC----FLNSGISDRTSLLRVVYCSRTHAQLSQVIREFKRTRYS 104
Query: 121 P--KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKK-GTNRRCNHHSRVADYMKNNPH 177
M +LGSR+ +C++ +V L S +A R LC + +R C +
Sbjct: 105 SIFSMAVLGSRDHMCLNSQVLQLPSS---HAQRKLCSQLREDRNCRFYRGYEARAAGRKD 161
Query: 178 LGDEPI--DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKN 235
DE D+EDLV+ GR G CPY+ R+ K D+VF PYNY+ D FRK L E
Sbjct: 162 FPDELWIHDMEDLVSEGRKCGFCPYYYERDAAKDADVVFLPYNYVFDVSFRKQLPFELSG 221
Query: 236 SILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDN-- 293
S+LI DEAHNL + A+ +L L I E C + +R S DE N D
Sbjct: 222 SVLIVDEAHNLPSVLGSASCMNLQPLDLANAICE---CSRAMAMQRILSKDEDNNDDTSA 278
Query: 294 ------FAILRALLLKLEKRIAEVP--INSKELGFT-----------------KPGPYIY 328
FA L+ +L LE I P + SKE T + G Y+
Sbjct: 279 VTSEQEFASLKVILCGLEACIVNEPRELPSKEEAETHAGRLDTSGSLTGCEIVRSGSYMI 338
Query: 329 ELLADLNITQETAYKLIDIVEVAAELLQED-KLQNKKSTTACRIESISNILKIIFR--DK 385
L IT + + E++ + + ++ +T + + L +F +
Sbjct: 339 PFLRKAAITHDIFFGDGGEGGFINEVISKALTVLSQSESTGVGLSKVQQFLSFVFERCGE 398
Query: 386 GTAHSAYYRVHVREADANAADVLKGKAS-RTLSWWCFNPGIAMQEFSRLEVGSIILTSGT 444
G S+Y+ + D + G A+ RTLS+WC + +Q ++ S++LTSGT
Sbjct: 399 GDDDSSYFIL----TDGKNTN---GHANPRTLSYWCLDISRVVQSLV-CDLHSLLLTSGT 450
Query: 445 LSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
LSP+ FA EL ++F + ++ HVI KQ+ ++ GP G LN Y R+ ++Y+ L
Sbjct: 451 LSPLSHFAMELGVSFEVCLKGSHVIEEKQVIGSVLCRGPGGERLNGGYAFRNGVDYRIGL 510
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK-NTSHGNLT-TIWERICKHKKPVVEPR 562
G +VNI+RI P G+L+FFPSY ++ + W+ N T T+W + + K VEP
Sbjct: 511 GMALVNISRITPGGILVFFPSYVALNAAVDLWRTGGGRANETETVWAMLEQVKPVFVEPA 570
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
++ + + ++ ST GA AVCRG++SEG+DFAD GR VVI G+PFA TD
Sbjct: 571 AAADAQTIVTSFQREVDANSTRGAFLLAVCRGRISEGIDFADQHGRCVVIAGIPFANHTD 630
Query: 623 PKVRLKREYL---DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
VRLKREY+ + + GG+ +G +WY +A R+VNQ VGRVIRH+ DY
Sbjct: 631 LFVRLKREYITRVSTKRPAVGGKP-------FTGNEWYMNEAMRSVNQCVGRVIRHKDDY 683
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
GA++ DERF R +S W+ +S+F + +FF
Sbjct: 684 GAVVLADERFV--DRLHGLSEWVGSRCTVHSEFRGTYACIAKFF 725
>gi|268566755|ref|XP_002639805.1| C. briggsae CBR-BCH-1 protein [Caenorhabditis briggsae]
gi|229891627|sp|A8WS58.1|RTEL1_CAEBR RecName: Full=Regulator of telomere elongation helicase 1 homolog
Length = 994
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 259/763 (33%), Positives = 387/763 (50%), Gaps = 64/763 (8%)
Query: 11 VEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLG 70
++FPFE Y+CQ ++M+ VI L K +A LESPTGTGKTL LLC+TLAW + L +
Sbjct: 19 IKFPFEPYECQRIFMKNVIDVLDMKLDAALESPTGTGKTLSLLCSTLAWVQKLKESKPMD 78
Query: 71 SQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSR 129
+ + +S +PTI Y SRTHSQL QV+ EL + Y+ K ILGSR
Sbjct: 79 FATWQSSGAGGAEKTEDKLKNSFIPTIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSR 138
Query: 130 EQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYM--KNNPHL-GDEPIDI 185
E CI+++V ++ S Q + CR L K R C+++++ K N L E +DI
Sbjct: 139 EHFCINQKVKKIKESNRQAHVCRGLVSK---RSCHYYNKFDALTTDKANEILEKGEAMDI 195
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHN 245
ED V IG CPYFM+R+ +T +++ PYNY+IDP R+ ++ KNSI+IFDEAHN
Sbjct: 196 EDFVKIGTQNSICPYFMSRQRSETAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAHN 255
Query: 246 LEGICADAASFDLSSGLLTACISEAKNCIDI---------------SSTRRGQSSD---- 286
LE IC AS +LSS + CI E K + + + Q D
Sbjct: 256 LESICESNASAELSSTSIALCIEELKKVLALLVEEEENAREEADNETEAFGTQKIDLTKK 315
Query: 287 --ETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP-------GPYIYELLADLNIT 337
E L ++ L + LE+ ++ S +L P G + E LA+
Sbjct: 316 LIENLRTEDLMALLEKVFTLEENFDKL-FESDQLKSVPPLDGKASDGAILLETLANSGCD 374
Query: 338 QETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGT-AHSAYYRVH 396
+ + +D++ A L + + +ES+++ L I+ +A H
Sbjct: 375 GNSVERFVDVLRDAISYLLSKNEEVSLTEKGDGMESVADFLLSIYSTHAQEVAAAVGDEH 434
Query: 397 VREAD----ANAAD-----VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSP 447
++ AD A A + K + ++CF I+M+ V +++L SGTLSP
Sbjct: 435 IKLADRVDPATVARNCKLYIRKDSGKLVIKYFCFQASISMRMLKMRGVRNVLLASGTLSP 494
Query: 448 MDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNT 507
+ +F + LNF +EN H + + IV G G L+ S++NR +IEY ++G +
Sbjct: 495 IQAFTYNMGLNFGAILENEHALKQVPVLTSIVTRGKHGGLV-GSFQNRKNIEYVSDVGES 553
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHG---NLTTIWERICKHKKPVVEPRQS 564
++ + P G+L+FF SY MD+ + WK T G + T WE++ K KK VEPR
Sbjct: 554 LIRVMETTPQGVLVFFSSYSQMDELVEVWKKTKRGASDSPETFWEKMEKTKKIAVEPRAK 613
Query: 565 SLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
Y + + GA AVCRGKVSEG+DF D RAV+I G+P+ + D +
Sbjct: 614 EQLAAVRLRYTQGV--SEPHGAALLAVCRGKVSEGIDFCDAESRAVIIVGIPYPPIHDER 671
Query: 625 VRLKREYL-DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
V LK+ YL DL + K+ S DWY +A RAVNQA+GRV+RH++D+G ++
Sbjct: 672 VVLKKMYLDDLMGR------KDLTNEPQSSRDWYQMEAFRAVNQAIGRVLRHKNDFGTVV 725
Query: 684 FCDERFAHPSRKSQISLWIQPHI-QCYSKFGDVVYTLTRFFRE 725
D R+A ++ W++ I +C S + RFF+E
Sbjct: 726 LIDTRYAS-AKPEMFPKWLRNTISRCDS--NNCALKTARFFKE 765
>gi|255539256|ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
gi|223551394|gb|EEF52880.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
Length = 1248
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 264/797 (33%), Positives = 391/797 (49%), Gaps = 110/797 (13%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATLA 58
Y I GI VEFP++ Y QL +M +VI +L C+ALLESPTGTGK+L LLC+TLA
Sbjct: 19 YHIGGIQVEFPYQPYGPQLAFMGRVISTLDRAVRDGHCHALLESPTGTGKSLSLLCSTLA 78
Query: 59 WRKSLGSFSTLGSQVNNQ------------------------------ISGSQSSVNSSQ 88
W+++ S L ++ + +Q + S
Sbjct: 79 WQQNYKSKQQLADLTQSKPNPEAITDPIGHGGGFIPETQPSSIPPSGNLEAAQPAAVSKT 138
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQ-N 147
PTI Y+SRTH Q+ QVI+E + + YR M +L SR C + V+ G +
Sbjct: 139 QKKKAAPTIFYSSRTHGQITQVIREYRKTAYRVPMAVLASRRHYCTNAHVN---GKENID 195
Query: 148 NACRFLCKK---GTNRRCNHHSRVADYMKNNPHLG----DEPIDIEDLVNIGRTFGPCPY 200
C+ L K G + N H +K +P L E DIEDLV +G+ C Y
Sbjct: 196 EECKLLLKDPDAGCLQFKNAHK-----VKGHPSLQRGGCHEVHDIEDLVKVGKVVRGCSY 250
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSS 260
+ R + +VF PYNY+I+P R + ++ + +ILI DEAHN+E I DA S D+
Sbjct: 251 YAARSMADDAQLVFCPYNYVINPVIRGAMEIDIRGAILILDEAHNIEDIARDAGSVDVEE 310
Query: 261 GLLTACISEAKN-CIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELG 319
+L +E + C+ +S + + + + LL +++R + + + +
Sbjct: 311 DILYKLQTELEQLCVHNTSIYQPL----------YEMTQDLLSWIDQRKSTLQKHGFQHY 360
Query: 320 FTK-PGPYIYELLADLNITQETAYKLID--IVEVAAELLQEDKLQNKKSTTACRIESISN 376
F+ G L + NI+Q+ L+D + + A E + + +E + +
Sbjct: 361 FSSWSGDKALRELQEANISQQCFPILLDCALKAIKAATDTEPDIAHLSGMAVIVLEGLFS 420
Query: 377 ILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
L F G H + Y++ ++ G+ + TLS WC NP + ++ + L +
Sbjct: 421 SLTYFFSRNG-CHVSDYQLALQRHIKRDRKSPVGEWTLTLSLWCLNPAVVFRDIADLSL- 478
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK-QIWAGIVPVGPSGYLLNSSYRNR 495
S+ILTSGTLSPM+SF+ EL + F +E PHVI ++ Q+WA ++ GP Y LN+SY+
Sbjct: 479 SVILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDNESQVWAAVISTGPDNYPLNASYKTA 538
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
D ++ LG T+ I IVP G L+FFPSY LM++ W+ T W R+ K
Sbjct: 539 DEFAFQDALGKTLEEICMIVPAGSLVFFPSYKLMEKLCNRWRETGQ------WSRLNAKK 592
Query: 556 KPVVEPR--QSSLFPLAIEDYMAKLKDTST-------------------------SGAVF 588
VEPR Q F ++ Y + +T GA F
Sbjct: 593 SLFVEPRGSQEEEFDSVLKGYYDSICKCNTHAVGRKKRVKRLDLKKAVESTENLGKGAAF 652
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKL 648
AVCRGKVSEG+DF+D R V++ G+PF + D +VRLK+ Y D YK +K
Sbjct: 653 LAVCRGKVSEGMDFSDDNARVVIVVGIPFPNILDIQVRLKKSYNDT--------YKTSK- 703
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
+ LSG +WY QA RA+NQA+GR IRHR DYGAII DER+ + IS W++ I
Sbjct: 704 NLLSGNEWYCYQAFRALNQAIGRCIRHRFDYGAIILLDERYKKEQNRMYISKWLRKSICQ 763
Query: 709 YSKFGDVVYTLTRFFRE 725
Y + + L FFR+
Sbjct: 764 YDSYSMSIEGLKSFFRD 780
>gi|297850492|ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
gi|297338969|gb|EFH69386.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
Length = 1171
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 269/794 (33%), Positives = 396/794 (49%), Gaps = 118/794 (14%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATLA 58
Y+I G+ VEFP++ Y QL +M +VI +L C+ALLESPTGTGK+L LLC+ LA
Sbjct: 27 YQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVLA 86
Query: 59 WRKSLGSFSTLGSQVNN---------------------QISGSQSSVN-----SSQSGDS 92
W+++ S G+ ++ Q S + +S N ++ +
Sbjct: 87 WQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGFIPETQPSDTPASTNVEKAETATKKRT 146
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRF 152
K+PTI Y SRTHSQ+ QVI+E + + YR M +L SR+ C +R V
Sbjct: 147 KIPTIYYASRTHSQITQVIREYRKTGYRVPMAVLASRKHYCTNRHV-------------- 192
Query: 153 LCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
L K + N + ++ + P +E DIEDLV +G+ CPYF + + + +
Sbjct: 193 LGKDNVDDEWNVN-KITSHPSLQPRGHNEVHDIEDLVKVGKNVRGCPYFASWSMAENAQL 251
Query: 213 VFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
VF PY+Y+++P R G+ V+ K +I+IFDEA L + L T + N
Sbjct: 252 VFCPYSYIVNPVIRAGVEVDLKGAIIIFDEAQFLSMLVM------LMIRPSTKSFTVHSN 305
Query: 273 CIDIS-STRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELG-------FTK-P 323
DI+ + Q+ E ++ I + L +E I+ + L F+
Sbjct: 306 MEDIAREAGKLQNELEQMSLAQPMIYQPLCEVVEGLISWIGRKKDSLAKRDFQHYFSSWT 365
Query: 324 GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK----KSTTACRIESISNILK 379
G L + NIT+E L++ A +E ++++ + +E + + L
Sbjct: 366 GDKALRELEESNITRECFPILLECFTKAIRTSKEAEMESDMLYLSGISVLTLEELFSSLT 425
Query: 380 IIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT----LSWWCFNPGIAMQEFSRLEV 435
F G+ H Y++ ++ + +G SRT S WC NP + ++ + + +
Sbjct: 426 YFFSRNGS-HILDYQLGLQRS------TKRGDPSRTWTHTFSLWCMNPAVVFKDLADISL 478
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT-SKQIWAGIVPVGPSGYLLNSSYRN 494
SIILTSGTLSPM+SF+ EL + F +E PHVI + Q+WAG + GPS Y LN+SY+
Sbjct: 479 -SIILTSGTLSPMNSFSSELGMQFGTSLEAPHVIDPNMQVWAGAISNGPSNYPLNASYKT 537
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
D+ ++ LG ++ I IVP G LIFFPSY LM++ W+ T W R+C
Sbjct: 538 ADTYSFQDALGKSLEEICTIVPGGSLIFFPSYKLMEKLCTRWRETGQ------WSRLCLK 591
Query: 555 KKPVVEPRQSSL--FPLAIEDYMAKLK-----------------------DTSTSGAVFF 589
K VEPR + F ++ Y ++ D S GA F
Sbjct: 592 KDLFVEPRGGAQDEFDSVLKGYYDSIRGKNKLVGRNRRAKKAGPIKTETQDDSKKGAAFL 651
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
AVCRGKVSEG+DFAD RAV+I G+PF + D +V LK++Y D YK +K S
Sbjct: 652 AVCRGKVSEGIDFADDNARAVIIVGIPFPNLHDIQVGLKKKYNDT--------YKSSK-S 702
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCY 709
L G +WY QQA RA+NQA GR IRHR DYGAIIF DER+ ++ IS W++ I+ Y
Sbjct: 703 LLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAIIFLDERYKEQRNRASISKWLRQSIKVY 762
Query: 710 SKFGDVVYTLTRFF 723
F + L FF
Sbjct: 763 DNFEASMEGLRYFF 776
>gi|340052773|emb|CCC47058.1| putative helicase [Trypanosoma vivax Y486]
Length = 968
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/775 (33%), Positives = 382/775 (49%), Gaps = 92/775 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP IRG+++ FPF+ Y Q+ YM+ V+ +L N NALLESPTGTGKTLCLLCA LAW
Sbjct: 1 MPCIVIRGVEISFPFDPYPAQVEYMQAVMDALDNAANALLESPTGTGKTLCLLCAVLAWL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ S S G +G + ++Y SRTH+QL VI+ELK ++Y
Sbjct: 61 EKRQSISFSGGA----------------TGSPGVTRVVYCSRTHTQLSHVIRELKKTSYS 104
Query: 121 P--KMVILGSREQLCIHREVSLLRG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPH 177
M I+GSRE +C+H +V L+ AQ C L + ++ C+ + + N
Sbjct: 105 SAFSMAIMGSREHMCVHSQVLRLQSVHAQQAMCNSLRE---DKNCHFYRGFQSRLARNEM 161
Query: 178 LGDEPI--DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKN 235
L E D+EDL G G CPY+ REL K I+F PYNY+ D R+ L + K+
Sbjct: 162 LSKESCVHDMEDLFAEGYKCGFCPYYWERELAKESSIIFLPYNYIFDSTLRRQLPFDLKD 221
Query: 236 SILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ------SSDET- 288
+LI DEAHNL + + +L L I + I + RR ++D+T
Sbjct: 222 CVLIVDEAHNLPSVLGSSFCVNLQPLELANAIHDCSRAI---AARRAMKDSGVGANDDTQ 278
Query: 289 --LNPDNFAILRALLLKLEKRIAE---------------VPINSKELG------------ 319
+ A L+ +L LEK IAE V S G
Sbjct: 279 GDMEEQELASLKIILCNLEKCIAEEPMELEKEEDSGNSCVEAMSAVRGAAVAAPSLLGGC 338
Query: 320 -FTKPGPYIYELLADLNITQETAYK-------LIDIVEVAAELLQEDKLQNKKSTTACRI 371
+ G YI L IT++ + + ++ A LL + ++ A +
Sbjct: 339 EIVRKGSYIIPFLEKALITRDLYFGHGAREGGMSSVITKAITLLSQSEM------AATGL 392
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFS 431
+ +L +F G R + + ++ R L +WC + ++Q
Sbjct: 393 TKVQQLLAFVFERCGEEFDEACRFVLALSPQSSG----APKQRVLGYWCLDISPSLQTLV 448
Query: 432 RLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
+ V S+ILTSGTLSP+D FA E+ ++F + + HVI Q+ I+ GPSG LN S
Sbjct: 449 K-SVHSLILTSGTLSPLDHFAAEIGIHFEVCLSGGHVIAPSQVAGCILCKGPSGERLNGS 507
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH--GNLTTIWE 549
Y R S++Y+ LG +VNI+R P G+L+FFPSY ++ + W+ S TIW
Sbjct: 508 YAFRSSLDYRIGLGMALVNISRNTPGGVLVFFPSYVALNAAVDLWRAGSGRTNETETIWA 567
Query: 550 RICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
+ +H KPV VEP + + ++ + GA+ AVCRGKVSEG++FAD+ GR
Sbjct: 568 ML-EHVKPVFVEPTDVRDTSTIVTSFQREVDAAPSRGAILLAVCRGKVSEGINFADNHGR 626
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
V++ G+PFA TD VRLKREY+ S + + + +G+DWY +A R VNQ
Sbjct: 627 CVLVAGIPFANYTDLFVRLKREYVS----SVAAQRPKVRGRTFTGDDWYINEAMRCVNQC 682
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
VGRVIRH+ DYG ++ DERF+ + +S W+ + +F + +FF
Sbjct: 683 VGRVIRHKDDYGVVVLADERFS--DKIDALSGWLASRCTVHREFRGTYAAVAQFF 735
>gi|66475604|ref|XP_627618.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
gi|46229294|gb|EAK90143.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
Length = 1108
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 284/854 (33%), Positives = 426/854 (49%), Gaps = 179/854 (20%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS- 62
Y I G V FP++AY CQ+ YM+K++ SL+ K +ALLESPTGTGKTLCLL +TLA++K
Sbjct: 16 YLIEGYSVPFPYDAYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAFQKHF 75
Query: 63 LGSFSTLGSQVNN--------------QISGSQSSV---NSSQSGDSKLPTILYTSRTHS 105
L S +L + N ++ G +V N D +P I+Y+SRTHS
Sbjct: 76 LISHGSLKKPIENTSSAGVIKSEGGSIELMGVPRTVLENNKETKMDMLIPRIIYSSRTHS 135
Query: 106 QLRQVIQELK--------------------------TSNYRP---------KMVILGSRE 130
QL QV++ELK TS RP K ILGSR+
Sbjct: 136 QLSQVMRELKSSGISDGFTIELFDTDAENKAKIEKSTSKKRPVIKGGKKLFKATILGSRD 195
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVN 190
QLC+H ++S RG+A CR + K+G +C +H+ + N + + DIEDL N
Sbjct: 196 QLCVHPKISKFRGNALIKNCRKITKEG---KCKYHNNLK--QANTSGVAADIQDIEDLKN 250
Query: 191 IGRTFGP---CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
I + CP++ TRE++ ++V PYNYL+D R+ L ++ N++LI DEAHN+E
Sbjct: 251 IASSSDSGYFCPFYATREIESVCNVVLLPYNYLLDSITRQNLKIDLNNTVLILDEAHNVE 310
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRG----QSSDETLNPDN--FAILRALL 301
+ +A SFDL L +N ++ +T+ G + SDE + + F I A+
Sbjct: 311 SVSEEAYSFDLRDIDLALSQKAIQNILE--ATKLGLLQEKESDEQDSEVDISFDIEVAVA 368
Query: 302 LK-----LEKRIAEVPI------NSKEL----------GFTKPGPYIYELLAD----LNI 336
L L + + E+P N + G T PG +IY L A ++
Sbjct: 369 LATGIHLLSRNLKEIPCPVPTNNNGSKFKSFPKMGEVQGTTYPGSHIYSLFASSGFGIDN 428
Query: 337 TQETAYKLIDIVEVAAELL--------QEDKLQNKKSTTACRIESISNILKIIFRDKGTA 388
Q L +++ L+ Q D + + +E L++ F +
Sbjct: 429 FQAIDECLTNMINFGQNLVGPGGNVSSQLDVNSIQINARIGALERFQRCLRLTFNETVMK 488
Query: 389 HSAYYRVHVR-EADA----NAADVLKGKASRT------------LSWWCFNPGIAMQEFS 431
+ ++++++ E D+ N D G+ S LS+WCF+ A+
Sbjct: 489 NPQWFKLYIHYEPDSYKEINGFDENGGQNSFVDPETTDQGLSLYLSFWCFSAAAALSSLV 548
Query: 432 RLEVGSIILTSGTLSPMDSFAQEL---KLNFPLRVENPHVITSK-QIWAGIVPVGPS--G 485
V S+I+TSGTLSP+D+ AQ+ + F + +EN HVI S+ Q+WA + G S
Sbjct: 549 SAGVRSMIITSGTLSPLDTLAQQFSSSNVTFDVFLENDHVIDSESQLWAATLERGNSTNN 608
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
L SY R++ Y LG+ + + + +PDG+L+FF SY LMDQ + W T G
Sbjct: 609 THLIGSYEARNNPSYFSSLGSVVFDCVKRIPDGILLFFGSYSLMDQAVKHW--TDQG--- 663
Query: 546 TIWERICKHKKPVVEPRQSSLFPL--------------------------------AIED 573
+ ERI K +EPR S F L + D
Sbjct: 664 -LIERIKAFKSVFIEPRNS--FELGSVLDSYMDCIKKGADSSSQNDGYFKDKKAKSGLSD 720
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
++ K K S+SG++ AVCRGKVSEG++F+D+A R V+I G+PF ++ D +V LK++Y+D
Sbjct: 721 FVLKSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPSIADARVCLKKQYMD 780
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
E+K + G WYNQQA RAVNQA+GRV+RHR+DYGAII D+RF P+
Sbjct: 781 -----------ESK---MDGRQWYNQQAIRAVNQAIGRVVRHRNDYGAIILADKRFNQPN 826
Query: 694 RKSQISLWIQPHIQ 707
+++S WI+ + +
Sbjct: 827 IYTRLSKWIRTNTK 840
>gi|32398845|emb|CAD98555.1| similar to helicase-like protein nhl, possible [Cryptosporidium
parvum]
Length = 1100
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 283/854 (33%), Positives = 426/854 (49%), Gaps = 179/854 (20%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS- 62
Y I G V FP++AY CQ+ YM+K++ SL+ K +ALLESPTGTGKTLCLL +TLA++K
Sbjct: 8 YLIEGYSVPFPYDAYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAFQKHF 67
Query: 63 LGSFSTLGSQVNN--------------QISGSQSSV---NSSQSGDSKLPTILYTSRTHS 105
L S +L + N ++ G +V N D +P I+Y+SRTHS
Sbjct: 68 LISHGSLKKPIENTSSAGVIKSEGGSIELMGVPRTVLENNKETKMDMLIPRIIYSSRTHS 127
Query: 106 QLRQVIQELK--------------------------TSNYRP---------KMVILGSRE 130
QL QV++ELK TS RP K ILGSR+
Sbjct: 128 QLSQVMRELKSSGISDGFTIELFDTDAENKAKIEKSTSKKRPVIKGGKKLFKATILGSRD 187
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVN 190
QLC+H ++S RG+A CR + K+G +C +H+ + N + + DIEDL N
Sbjct: 188 QLCVHPKISKFRGNALIKNCRKITKEG---KCKYHNNLK--QANTSGVAADIQDIEDLKN 242
Query: 191 IGRTFGP---CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
I + CP++ TRE++ ++V PYNYL+D R+ L ++ N++LI DEAHN+E
Sbjct: 243 IASSSDSGYFCPFYATREIESVCNVVLLPYNYLLDSITRQNLKIDLNNTVLILDEAHNVE 302
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRG-----QSSDETLNPD-NFAILRALL 301
+ +A SFDL L +N ++ +T+ G +S ++ D +F I A+
Sbjct: 303 SVSEEAYSFDLRDIDLALSQKAIQNILE--ATKLGLLQEKESDEQDSEVDISFDIEVAVA 360
Query: 302 LK-----LEKRIAEVPI------NSKEL----------GFTKPGPYIYELLAD----LNI 336
L L + + E+P N + G T PG +IY L A ++
Sbjct: 361 LATGIHLLSRNLKEIPCPVPTNNNGSKFKSFPKMGEVQGTTYPGSHIYSLFASSGFGIDN 420
Query: 337 TQETAYKLIDIVEVAAELL--------QEDKLQNKKSTTACRIESISNILKIIFRDKGTA 388
Q L +++ L+ Q D + + +E L++ F +
Sbjct: 421 FQAIDECLTNMINFGQNLVGPGGNVSSQLDVNSIQINARIGALERFQRCLRLTFNETVMK 480
Query: 389 HSAYYRVHVR-EADA----NAADVLKGKASRT------------LSWWCFNPGIAMQEFS 431
+ ++++++ E D+ N D G+ S LS+WCF+ A+
Sbjct: 481 NPQWFKLYIHYEPDSYKEINGFDENGGQNSFVDPETTDQGLSLYLSFWCFSAAAALSSLV 540
Query: 432 RLEVGSIILTSGTLSPMDSFAQEL---KLNFPLRVENPHVITSK-QIWAGIVPVGPS--G 485
V S+I+TSGTLSP+D+ AQ+ + F + +EN HVI S+ Q+WA + G S
Sbjct: 541 SAGVRSMIITSGTLSPLDTLAQQFSSSNVTFDVFLENDHVIDSESQLWAATLERGNSTNN 600
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
L SY R++ Y LG+ + + + +PDG+L+FF SY LMDQ + W T G
Sbjct: 601 THLIGSYEARNNPSYFSSLGSVVFDCVKRIPDGILLFFGSYSLMDQAVKHW--TDQG--- 655
Query: 546 TIWERICKHKKPVVEPRQSSLFPL--------------------------------AIED 573
+ ERI K +EPR S F L + D
Sbjct: 656 -LIERIKAFKSVFIEPRNS--FELGSVLDSYMDCIKKGADSSSQNDGYFKDKKAKSGLSD 712
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
++ K K S+SG++ AVCRGKVSEG++F+D+A R V+I G+PF ++ D +V LK++Y+D
Sbjct: 713 FVLKSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPSIADARVCLKKQYMD 772
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
E+K + G WYNQQA RAVNQA+GRV+RHR+DYGAII D+RF P+
Sbjct: 773 -----------ESK---MDGRQWYNQQAIRAVNQAIGRVVRHRNDYGAIILADKRFNQPN 818
Query: 694 RKSQISLWIQPHIQ 707
+++S WI+ + +
Sbjct: 819 IYTRLSKWIRTNTK 832
>gi|296481054|tpg|DAA23169.1| TPA: regulator of telomere elongation helicase 1 [Bos taurus]
Length = 583
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/579 (38%), Positives = 331/579 (57%), Gaps = 49/579 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP ++G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPKITLKGVTVDFPFQPYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGS-------QSSVNSSQSGD-----SKLPTILYTSRTHSQLR 108
+ L + ++ + SG S N+ GD + +P I+Y SRTHSQL
Sbjct: 61 EHLRD-AVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLT 119
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QVI EL+ ++YRP++ +LGSREQLCIH EV + N+ LC++ R H
Sbjct: 120 QVISELRNTSYRPRVCVLGSREQLCIHPEV---KKQESNHMQVHLCRRKVASRSCHFYNN 176
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ L +DIEDLV G CPY+++R L++ DI+F PYNYL+D R+
Sbjct: 177 VEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLDAKSRRA 236
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSS-------GLLTACISEAKNCIDISSTRR 281
G++ K +++IFDEAHN+E +C +AASFDL+ ++ + E +
Sbjct: 237 HGIDLKGTVVIFDEAHNVEKMCEEAASFDLTPHDVASELDVIDRVLEERTKVAQQAELHP 296
Query: 282 GQSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
S+D L P++ A L+ +LL+LE I V + G TKPG YI+EL A+ I
Sbjct: 297 EFSADSARSGLNLEPEDLAKLKMILLRLEGAIDAVELPGDNSGVTKPGSYIFELFAEAQI 356
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR------DKGTA-- 388
T +T ++D ++ +L+Q + T ++ + +I++I+F D G
Sbjct: 357 TFQTKGCILDSLD---QLIQHLAGRAGLFTNTAGLQKLVDIIQIVFSVDSAEGDPGPMVG 413
Query: 389 -HSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSI 438
S Y+VH+ A +DV A+R LS+WCF+PG +M+E R V ++
Sbjct: 414 LASQSYKVHIHLDAGHRRTAQRSDVWNTTAARKPGKVLSYWCFSPGHSMRELVRQGVRTL 473
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTL+PM SF+ E+++ FP+ +ENPHVI QIW G++P GP G L+S++ R S
Sbjct: 474 ILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIWVGVIPKGPDGAQLSSAFDRRFSD 533
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
E LG + NI+R+VP GLL+FFPSY +M++ + W+
Sbjct: 534 ECLSSLGKVLSNISRVVPHGLLVFFPSYPVMEKSLEFWR 572
>gi|67623207|ref|XP_667886.1| helicase [Cryptosporidium hominis TU502]
gi|54659060|gb|EAL37657.1| helicase, belonging to UvrD family [Cryptosporidium hominis]
Length = 1100
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 283/857 (33%), Positives = 426/857 (49%), Gaps = 185/857 (21%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS- 62
Y I G V FP++AY CQ+ YM+K++ SL+ K +ALLESPTGTGKTLCLL +TLA++K
Sbjct: 8 YLIEGYSVPFPYDAYKCQINYMQKILYSLKYKKHALLESPTGTGKTLCLLASTLAFQKHF 67
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSG--------------------DSKLPTILYTSR 102
L S +L + N S + V S+ G D +P I+Y+SR
Sbjct: 68 LISHGSLKKPIENT---SSAGVIKSEGGSIELMGVPRTVLENSKETKMDMLIPRIIYSSR 124
Query: 103 THSQLRQVIQELK--------------------------TSNYRP---------KMVILG 127
THSQL QV++ELK TS RP K ILG
Sbjct: 125 THSQLSQVMRELKSSGISDGFTIELFDTDAENKAKIEKSTSKKRPVIKGGKKLFKATILG 184
Query: 128 SREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIED 187
SR+QLC+H ++S RG+A CR + K+G +C +H+ + N + + DIED
Sbjct: 185 SRDQLCVHPKISKFRGNALIKNCRKITKEG---KCKYHNNLK--QANTSGVAADIQDIED 239
Query: 188 LVNIGRTFGP---CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH 244
L NI + CP++ TRE++ ++V PYNYL+D R+ L ++ N++LI DEAH
Sbjct: 240 LKNIASSSDSGYFCPFYATREIESVCNVVLLPYNYLLDSITRQNLKIDLNNTVLILDEAH 299
Query: 245 NLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG-----QSSDETLNPD-NFAILR 298
N+E + +A SFDL L +N ++ +T+ G +S ++ D +F I
Sbjct: 300 NVESVSEEAYSFDLRDIDLALSQKAIQNVLE--ATKLGLLQEKESDEQDSEVDISFDIEV 357
Query: 299 ALLLK-----LEKRIAEVPI------NSKEL----------GFTKPGPYIYELLAD---- 333
A+ L L + + E+P N + G T PG +IY L A
Sbjct: 358 AVALATGIHLLSRNLKEIPCPVPTNNNGSKFKSFPKMGEVQGTTYPGSHIYSLFASSGFG 417
Query: 334 LNITQETAYKLIDIVEVAAELL--------QEDKLQNKKSTTACRIESISNILKIIFRDK 385
++ Q L +++ L+ Q D + + +E L++ F +
Sbjct: 418 IDNFQAIDECLTNMINFGQNLVGPGGNVSSQLDVNSIQINARIGALERFQRCLRLTFNET 477
Query: 386 GTAHSAYYRVHVR-EADA----NAADVLKGKASRT------------LSWWCFNPGIAMQ 428
+ ++++++ E D+ + D G+ S LS+WCF+ A+
Sbjct: 478 VMKNPQWFKLYIHYEPDSYKEIDGFDENGGQNSFVDPETTDQGLSLYLSFWCFSAAAALS 537
Query: 429 EFSRLEVGSIILTSGTLSPMDSFAQEL---KLNFPLRVENPHVITSK-QIWAGIVPVGPS 484
V S+I+TSGTLSP+D+ AQ+ + F + +EN HVI S+ Q+WA + G S
Sbjct: 538 SLVSAGVRSMIITSGTLSPLDTLAQQFSSSNVTFDVFLENDHVIDSESQLWAATLERGNS 597
Query: 485 G--YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHG 542
L SY R++ Y LG+ + + + +PDG+L+FF SY LMDQ + W T G
Sbjct: 598 ANNTHLIGSYEARNNPSYFSSLGSVVFDCVKRIPDGILLFFGSYSLMDQAVKHW--TDQG 655
Query: 543 NLTTIWERICKHKKPVVEPRQSSLFPL--------------------------------A 570
+ ERI K +EPR S F L
Sbjct: 656 ----LIERIKAFKSVFIEPRNS--FELGSVLDSYMDCIKKGADSSSQNDGYFKDKKAKSG 709
Query: 571 IEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKRE 630
+ D++ K K S+SG++ AVCRGKVSEG++F+D+A R V+I G+PF ++ D +V LK++
Sbjct: 710 LSDFVLKSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPSIADARVCLKKQ 769
Query: 631 YLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA 690
Y+D E+K + G WYNQQA RAVNQA+GRV+RHR+DYGAII D+RF
Sbjct: 770 YMD-----------ESK---MDGRQWYNQQAIRAVNQAIGRVVRHRNDYGAIILADKRFN 815
Query: 691 HPSRKSQISLWIQPHIQ 707
P+ +++S WI+ + +
Sbjct: 816 QPNIYTRLSKWIRTNTK 832
>gi|313233732|emb|CBY09902.1| unnamed protein product [Oikopleura dioica]
Length = 1145
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 259/747 (34%), Positives = 385/747 (51%), Gaps = 65/747 (8%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFST 68
I V FP+E Y Q YM K I++L++ C+A+LESPTGTGKTLCLL + LA+R+ F+
Sbjct: 9 ITVRFPYEPYPAQDSYMSKCIEALKSGCHAILESPTGTGKTLCLLASVLAFREHY--FAE 66
Query: 69 LGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK----TSNYRPKMV 124
+ V + ++G+ +P I+Y+SRTHSQL QV+ ELK Y M
Sbjct: 67 MKKCVQSGVAGAHMG---------HVPKIIYSSRTHSQLSQVVSELKKLHTVCGYNIDMS 117
Query: 125 ILGSREQLCIHREVS-LLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI 183
++G R C++ +V + G Q N C LCK ++C H D M N L +
Sbjct: 118 VIGGRGSTCLNPKVKKIADGRLQQNTCSALCKA---KKC-HWFNTLDSM-NEETLPGGIL 172
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIEDLV C Y++ R L + +I+ PYNYL+DP R +E N ILIFDEA
Sbjct: 173 DIEDLVTWSTKRVSCAYYLGRRLAEKAEIILLPYNYLLDPRLRTRHKLEVANKILIFDEA 232
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCI----DISSTRRGQSSDETLNPDNFAILRA 299
HN+EG+C DAASF+L+S + + E K C+ DI+ S + N +
Sbjct: 233 HNVEGVCEDAASFELTSTEIALAMEECKVCLELIKDINQMDVPDESKDYYLKKNHNPMEG 292
Query: 300 LL---LKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
+ +EK A +SK+ G T + +L + + E + L V A +
Sbjct: 293 PMKGATSIEKAYAGQVRSSKD-GKTFAVSSLDNVLKETGFSSEAFFDLKHFVPQLATFVA 351
Query: 357 EDKLQNKKSTTACRIESISNILKI---IFRDKGTAHSAYYRVHVREADAN----AADVLK 409
E K T ++ + + L+I I K A A YR+ ++ D+ D
Sbjct: 352 E-----KSPTKGMKLNRVLDFLEIFSMIEPHKQEAEFAKYRLFIKTEDSKFKREKDDQFV 406
Query: 410 GKASRT----LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN-----FP 460
+A T + WCF+P ++ SIILTSGTLSP++ + L L+ P
Sbjct: 407 QEAEETKGMKICMWCFDPSKSITHLLDEGAKSIILTSGTLSPIEEYISNLGLDRHNSRLP 466
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLN--SSYRNRDSIEYKQELGNTIVNIARIVPDG 518
+ + N HV++S Q++ VP G L+ + Y NR + ++G I + P G
Sbjct: 467 VTLVNKHVVSSDQVFVATVPKGMGNSPLDMINVYSNRQNSRMFAQMGEIIASAKSASPGG 526
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
LL+F P+Y LM+ C W + N + + K +K +EP + DY +
Sbjct: 527 LLVFHPTYRLMNICRDFWGIMNGANASNPSGNMFK-RKIFIEPSNKNDLEQVNRDYETAI 585
Query: 579 KDTS--TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
D + G + VCRGK+SEG+DFAD GR V+ITG+P+A DPKV++K+EY+D+
Sbjct: 586 VDNNFEAQGGILMGVCRGKISEGVDFADARGRVVIITGIPYAPAMDPKVKMKKEYVDIA- 644
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
++E K S +SG DWY QA+RA+NQA+GR+IRHR+D+GAII+ D+RFA P +
Sbjct: 645 ------FRE-KRSVISGNDWYQIQAARAINQAIGRIIRHRNDFGAIIYLDKRFADPKMQK 697
Query: 697 QISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ W++ + Q + GD + R F
Sbjct: 698 YMPSWVKSNHQ--TIMGDQIADKLRIF 722
>gi|17506821|ref|NP_492769.1| Protein RTEL-1 [Caenorhabditis elegans]
gi|75018688|sp|Q93575.3|RTEL1_CAEEL RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|3876338|emb|CAB02102.1| Protein RTEL-1 [Caenorhabditis elegans]
Length = 994
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 260/771 (33%), Positives = 393/771 (50%), Gaps = 75/771 (9%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFST 68
+ V+FPFE Y+CQ ++M+ V+ L K +A LESPTGTGKTL LLC+TLAW +
Sbjct: 17 LSVKFPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQRQKETKP 76
Query: 69 LGSQVNNQISGSQSSVNSSQSGDSK-LPTILYTSRTHSQLRQVIQELKTSNYR-PKMVIL 126
L Q SG+ + + + S +PTI Y SRTHSQL QV+ EL + Y+ K IL
Sbjct: 77 LDF-ATWQTSGAGGAEKTDEKLKSAYVPTIFYASRTHSQLEQVVHELNRTEYKWVKTTIL 135
Query: 127 GSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR----VADYMKNNPHLGDE 181
GSRE CI+++V ++ S Q + CR L K R C+++++ D M G E
Sbjct: 136 GSREHFCINQKVKKIKESNRQAHVCRGLVSK---RACHYYNKFDACTTDKMTEFLDKG-E 191
Query: 182 PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFD 241
+DIED V +G CPYFM+R+ +T +++ PYNY+IDP R+ ++ KNSI+IFD
Sbjct: 192 AMDIEDFVKLGTQNSLCPYFMSRQRSETAELILLPYNYIIDPKMRRRYKLDLKNSIVIFD 251
Query: 242 EAHNLEGICADAASFDLSSGLLTACISEAKNC----IDISSTRRGQSSDET--------- 288
EAHNLE IC AS +L+S + CI E K +D T R ++ ET
Sbjct: 252 EAHNLESICESNASAELTSTSIALCIEELKKVLALLVDEEETARSEADAETGAFGSAKID 311
Query: 289 --------LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP-------GPYIYELLAD 333
L ++ + + LE+ + ++ S +L P G + E LA
Sbjct: 312 LTKKLIENLRTEDLMTVLEKIFSLEEEMDKL-FGSSQLKSVPPLSGKASDGEILLETLAK 370
Query: 334 LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYY 393
+ +L+D++ A L + + +E +++ L I+ + H+
Sbjct: 371 AGFDANSVERLVDVLRDAISYLLSKNEEVALTEKGDGMEKVADFLLSIY----STHAQDV 426
Query: 394 RVHVREADANAADVL----------------KGKASRTLSWWCFNPGIAMQEFSRLEVGS 437
V E D + K T+ ++CF I+M+ V +
Sbjct: 427 AAAVGEETVKLVDRVDPKTVARNCKLYIQKDKDNEKLTIKYFCFQASISMRMLKMRGVRN 486
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
++L SGTLSP+ +F + LNF +EN H + + IV G G L S++NR +
Sbjct: 487 VLLASGTLSPIQAFTYNMGLNFGAILENEHALKQVPVLTSIVTRGKRGGLAG-SFQNRKN 545
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNT--SHGNLTTIWERICKHK 555
++Y + ++ + ++P G+LIFF SY MD+ +A WK T S + + WE++ K K
Sbjct: 546 LDYVTGVAEALLRVMEVIPQGILIFFSSYSQMDELVATWKTTKWSSNSNESFWEKMEKTK 605
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+ VVEPR Y + + GA AVCRGKVSEG+DF D RAV+I G+
Sbjct: 606 RVVVEPRAKEELAAIRLRYTQGV--SEQHGAALLAVCRGKVSEGIDFCDAESRAVIIIGI 663
Query: 616 PFATMTDPKVRLKREYL-DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
P+ + D +V LK+ YL DL + K+TK S +DWY +A RAVNQA+GRV+R
Sbjct: 664 PYPPIHDERVVLKKMYLDDLMGR------KDTKSERQSSQDWYQMEAFRAVNQAIGRVLR 717
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
H+ D+G ++ D R+A ++ W++ I G + T +RFF+E
Sbjct: 718 HKDDFGTVVLMDTRYAS-AKPEMFPKWLRNTISRSDTDGCALKT-SRFFKE 766
>gi|221060536|ref|XP_002260913.1| DNA-repair helicase [Plasmodium knowlesi strain H]
gi|193810987|emb|CAQ42885.1| DNA-repair helicase, putative [Plasmodium knowlesi strain H]
Length = 1106
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 272/807 (33%), Positives = 412/807 (51%), Gaps = 102/807 (12%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I ++V FP+E YDCQ YM V+ +L+ K NA+LESPTGTGKTLCLLCA++++ +
Sbjct: 21 YTINDVEVYFPYELYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVDV 80
Query: 64 ----GSFSTLGSQVNNQ--ISGSQSSVNSSQSGDSK------LPTILYTSRTHSQLRQVI 111
G+FS + N+ IS +S+S K P I+Y SRTHSQL+QVI
Sbjct: 81 LEKKGAFSENINITENKKNISLDFKENENSRSSPPKASPANDFPKIIYASRTHSQLKQVI 140
Query: 112 QELKT-------SNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNH 164
+ELK Y+ ILGSR+QLC+H +G+ NN C+ K G C +
Sbjct: 141 KELKNVYFIKNNEKYKLLTTILGSRDQLCVHNINYNYKGTMLNNMCKRARKNG---ECMY 197
Query: 165 HSRVADYMKNNPHLGDEPIDIEDLVNIGR------TFGPCPYFMTRELQKTVDIVFAPYN 218
H+ + Y+ HL P+D+E L IG+ CP++ TRE+Q ++ PYN
Sbjct: 198 HNGLK-YLYKLKHLFTIPMDVETLSEIGKGNSVGQNIHFCPFYATREIQNECHVILLPYN 256
Query: 219 YLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI---- 274
YL + RK L + +NSI+I DE HN+E + +A SF + L + K +
Sbjct: 257 YLFEESTRKILKLNLENSIIIIDEGHNIETVAEEAVSFKIKDSDLNLFLDGIKATLTVLD 316
Query: 275 ---DISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSK--ELGFTKPGPYIYE 329
D+ R + S + L N +I AL+ LE E+ +K E T G I++
Sbjct: 317 KVKDVDKEMRERISVDELFKLNRSI-TALISWLENERLEISGKNKIKEKHKTYEGKEIFD 375
Query: 330 LLA--DLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESIS-------NILK- 379
+ ++NIT++ K ++ ELL ++ N TA +++I+ NI K
Sbjct: 376 IFQKNNINITKDNFEKFHTLLTCMVELL--NRYINDFKITAMDVKNINKYIATIDNIRKS 433
Query: 380 --IIFRDKGTAHSAYYRVHVRE--------ADA-----NAADVLKGKA-----------S 413
I+F D Y+++ + E AD N K K S
Sbjct: 434 FSILFSDVVRNCIEYFQLFINEEKVPYTECADVSKVYDNMKKFTKSKTKIVYDKYNYTMS 493
Query: 414 RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN---FPLRVENPHVIT 470
+ +S CF+ ++ + +V SII+TSGTLSP++ F+++L N F +EN HVI
Sbjct: 494 KNISLLCFSATASLCGILKEKVNSIIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHVIK 553
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
S Q++ G + + LL S+Y NR + Y Q LGN I ++ +P G+LIFF SY M
Sbjct: 554 SHQLFVGCMTHYNNQILL-STYENRSNDNYIQALGNCIFDLIICIPYGVLIFFSSYSSMT 612
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+ + WK I+E+I +K VEP +++ ++ Y +K GA+
Sbjct: 613 ETVNAWKKFK------IFEKINSYKTIFVEPNKAAELKDILQQYEYIIK-KKRKGAILMG 665
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD------------LQAQS 638
VCRGK+SEG+DF D R V+I G+P+ + D K+ K+E+LD L +
Sbjct: 666 VCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKKEFLDNFKYEFSPPNDILGGDN 725
Query: 639 QGGEY-KETKLSFLS-GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
G T LS +S G WYN++A R++NQ++GRVIRH++DYG+I F D RF++ R
Sbjct: 726 GAGALSNNTTLSNISKGNKWYNEEAMRSINQSIGRVIRHKNDYGSIFFLDSRFSNNQRIK 785
Query: 697 QISLWIQPHIQCYSKFGDVVYTLTRFF 723
+IS W++ H + Y + + +FF
Sbjct: 786 EISKWVRTHFRIYRDIEQIQSDIDKFF 812
>gi|194388328|dbj|BAG65548.1| unnamed protein product [Homo sapiens]
Length = 996
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/541 (39%), Positives = 317/541 (58%), Gaps = 47/541 (8%)
Query: 216 PYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID 275
PYNYL+D R+ ++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++
Sbjct: 2 PYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLE 61
Query: 276 --ISSTRRGQSSDE----------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP 323
+ ++G+ E + ++ A L+ +LL+LE I V + + G TKP
Sbjct: 62 EQTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKP 121
Query: 324 GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR 383
G YI+EL A+ IT +T ++D ++ +++Q + T ++ +++I++I+F
Sbjct: 122 GSYIFELFAEAQITFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFS 178
Query: 384 ----------DKGTAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPG 424
G Y+VH+ A +D A+R LS+WCF+PG
Sbjct: 179 VDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPG 238
Query: 425 IAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
+M E R V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP
Sbjct: 239 HSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPD 298
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
G L+S++ R S E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L
Sbjct: 299 GAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DL 355
Query: 545 TTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
E + KP+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+
Sbjct: 356 ARKMEAL----KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFS 411
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
D GR V++TG+P+ DP+V LK ++LD + + QGG + FLSG++WY QQASR
Sbjct: 412 DTNGRGVIVTGLPYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASR 466
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
AVNQA+GRVIRHR DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FF
Sbjct: 467 AVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFF 526
Query: 724 R 724
R
Sbjct: 527 R 527
>gi|410055438|ref|XP_003953847.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 997
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 320/541 (59%), Gaps = 47/541 (8%)
Query: 216 PYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID 275
PYNYL+D R+ ++ K +++IFDEAHN+E +C ++ASFDL+ L + + ++
Sbjct: 2 PYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLE 61
Query: 276 --ISSTRRGQSSDE--TLNP--------DNFAILRALLLKLEKRIAEVPINSKELGFTKP 323
+ ++G+ E T +P ++ A L+ +LL+LE I V + + G TKP
Sbjct: 62 EQTKAAQQGEPHPEFSTDSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKP 121
Query: 324 GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR 383
G YI+EL A+ IT +T ++D ++ +++Q + T ++ +++I++I+F
Sbjct: 122 GSYIFELFAEAQITFQTKGCILDSLD---QIIQHLAGRAGVFTNTAGLQKLADIIQIVFS 178
Query: 384 ----------DKGTAHSAYYRVHVR-----EADANAADVLKGKASR----TLSWWCFNPG 424
G Y+VH+ A +D A+R LS+WCF+PG
Sbjct: 179 VDPSEGSPGSPAGLGALQSYKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPG 238
Query: 425 IAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
+M+E R V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I QIW G+VP GP
Sbjct: 239 HSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPD 298
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
G L+S++ R S E LG + NIAR+VP GLLIFFPSY +M++ + W+ +L
Sbjct: 299 GAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRAR---DL 355
Query: 545 TTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
E + KP+ VEPR F I Y A++ ++GA F AVCRGK SEGLDF+
Sbjct: 356 ARKMEAL----KPLFVEPRSKGGFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFS 411
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
D GR V++TG+P+ DP+V LK ++LD + + QGG + FLSG++WY QQASR
Sbjct: 412 DTNGRGVIVTGLPYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FLSGQEWYRQQASR 466
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
AVNQA+GRVIRHR DYGA+ CD RFA ++Q+ W++PH++ Y FG V+ + +FF
Sbjct: 467 AVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFF 526
Query: 724 R 724
R
Sbjct: 527 R 527
>gi|209878272|ref|XP_002140577.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556183|gb|EEA06228.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 1091
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 284/913 (31%), Positives = 437/913 (47%), Gaps = 200/913 (21%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+ Y I G V FP++AYDCQ+ YMEKV+ SL+++ +ALLESPTGTGKT+CLL +TLA++
Sbjct: 5 LNVYTIDGYSVNFPYKAYDCQITYMEKVLYSLKHRKHALLESPTGTGKTMCLLASTLAFQ 64
Query: 61 KSLGSFSTLGSQVNN----------------------QISGSQSSVNSSQSGDSKL---- 94
+ L ++NN +I +S + + GDS L
Sbjct: 65 RDCIVKYNLTRKLNNSCEVDRNLKTTGTSNLYEEEHTKIEIDKSYNLNEEHGDSNLKKQK 124
Query: 95 -----PTILYTSRTHSQLRQVIQELKTS-------------------------------- 117
P I+Y+SRTHSQL QV++EL++S
Sbjct: 125 SEFILPRIIYSSRTHSQLSQVMRELRSSKIVEALWKNLNDLNIENSLRQDSPTNKKQRNT 184
Query: 118 -----NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM 172
N K ILGSR+QLC+H ++S RGSA CR K+G +C +H+ +
Sbjct: 185 MKNPGNKLFKATILGSRDQLCVHPKISKYRGSALVKNCRKTTKEG---KCRYHNNLK--Q 239
Query: 173 KNNPHLGDEPIDIEDLVNIGRTFGP--CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
N + + DIEDL I T CP++ TRE+ +++ PYNYL+D R+ L
Sbjct: 240 ANMTGIAGDIEDIEDLKRIASTDSGYFCPFYATREIANICNVILLPYNYLLDSITRQNLK 299
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLN 290
++ N+I+I DEAHN+E + +A S+DL L +N ++ + + + +
Sbjct: 300 LDLNNTIIILDEAHNVESVAEEAYSYDLRDIDLALSQKAIQNMLEAARSGLLKERESDKK 359
Query: 291 PDNFAI---------LRALLLKLEKRIAEVP----------INSKELGFTK----PGPYI 327
D+ +I L + +L K I ++P I SK LG + PG YI
Sbjct: 360 EDDISISFDIEIAIHLATSVYELSKLIRDIPCKVPNNRNERIRSK-LGDVEGTIFPGSYI 418
Query: 328 YELLADLNIT----QETAYKLIDIVEVAAELLQE-DKLQNKKSTTACRI-------ESIS 375
+ L T Q L ++ L L + T ++ E
Sbjct: 419 HTLFKSAGFTIDKFQNMDECLTSMINFGQGLSGNISDLSSLSDITPIQLNARIGALERFQ 478
Query: 376 NILKIIFRDKGTAHSAYYRVHVR-----------------------EADANAADVLKGKA 412
L++ F ++ +++V+V E D N ++
Sbjct: 479 RCLRLTFNTCAVSNPQWFKVYVHYEISQQNGLNSEESIDINRDIDTEYDGNYYNL----- 533
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL---KLNFPLRVENPHVI 469
LS+WCF+P A+ V S+I+TSGTLSP+D+ AQ+ +F + +EN HVI
Sbjct: 534 --CLSFWCFSPAAALTSLVSSGVRSLIVTSGTLSPLDTLAQQFSCANFSFEVFLENDHVI 591
Query: 470 T-SKQIWAGIVPVGP--SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
++Q+W + G + L S+ +R + Y + LG+T+++ + +P G+L+FF SY
Sbjct: 592 NGNEQLWVAAIEQGAPENKTQLIGSFESRSNPAYFEALGSTVLDSVKRIPGGVLLFFASY 651
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY------------ 574
LMDQ I W T G + +RI K VEPR S +E Y
Sbjct: 652 TLMDQAINLW--TIQG----LMDRIKALKSVFVEPRNSYELNSILESYKGCIELKSKNNV 705
Query: 575 ----MAKLKD-------TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDP 623
+ KL D + G++ AVCRGK+SEG+DF+D R V+I GMPF ++ DP
Sbjct: 706 KSNSLDKLTDFTNITKKCANFGSLLIAVCRGKISEGIDFSDDTCRGVIIAGMPFPSIADP 765
Query: 624 KVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
+V LK++Y+D EY+ + WYNQQA RAVNQAVGRV+RHR DYGA+I
Sbjct: 766 RVCLKKQYMD--------EYR------MDSRRWYNQQAIRAVNQAVGRVVRHRLDYGAVI 811
Query: 684 FCDERFAHPSRKSQISLWIQPHIQCYSKFGDV-VYTLTRFFREE---RICGSTN------ 733
F D+RF H + ++Q+S W++ +I+C + +++ FF + ++ G++N
Sbjct: 812 FADKRFTHTNIRNQLSKWLRGYIRCLEYLNTTNLNSISTFFNRDLHNKLIGNSNNLNDNK 871
Query: 734 LKLIKTEVSGDVR 746
L L+ +V +R
Sbjct: 872 LDLLSNKVDESIR 884
>gi|389585879|dbj|GAB68609.1| DNA repair helicase, partial [Plasmodium cynomolgi strain B]
Length = 1101
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 269/829 (32%), Positives = 417/829 (50%), Gaps = 105/829 (12%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I ++V FP+E YDCQ YM V+ +L+ K NA+LESPTGTGKTLCLLCA++++ +
Sbjct: 21 YTINDVEVYFPYELYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVDV 80
Query: 64 ----GSFSTLGSQVNNQISGSQSSV------NSSQSGD-------SKLPTILYTSRTHSQ 106
G+FS N I+ ++ ++ N + G S P I+Y SRTHSQ
Sbjct: 81 MEKKGAFSE-----NINITENKKNISFDFKENENSKGSPAKVAPPSDFPKIIYASRTHSQ 135
Query: 107 LRQVIQELKT-------SNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTN 159
L+QVI+ELK Y+ ILGSR+QLC+H +G+ NN C+ K G
Sbjct: 136 LKQVIKELKNVYFIKNNEKYKLLTTILGSRDQLCVHNINYNYKGTMLNNMCKRTRKNG-- 193
Query: 160 RRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGR------TFGPCPYFMTRELQKTVDIV 213
C +H+ + Y+ HL P+D+E L IG+ CP++ TRE+Q ++
Sbjct: 194 -ECMYHNGLK-YLYKLKHLFTTPMDVETLSEIGKGNSVGQNIHFCPFYATREIQNECHVI 251
Query: 214 FAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNC 273
PYNYL + RK L + +NSI+I DE HN+E + +A SF + L + K
Sbjct: 252 LLPYNYLFEESTRKILKLNLENSIIIIDEGHNIETVAEEAVSFKIRDSELNLFLEGIKAT 311
Query: 274 IDI--SSTRRGQSSDETLNPDNFAILR----ALL--LKLEKRIAEVPINSKELGFTKPGP 325
+ + + + + +N D IL AL+ L E+ KE T G
Sbjct: 312 LTVLDKVNDVDKETKDKVNVDQLFILNRSITALISWLDNERLEKNEKNKVKEKHKTYEGK 371
Query: 326 YIYELLA--DLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR-----IESISNIL 378
I+++ ++NIT++ ++ ELL K S + I +I NI
Sbjct: 372 QIFDIFEKNNINITKDNFENFHTLLSSMVELLNRYINDFKISQMDVKNITKYISTIDNIR 431
Query: 379 K---IIFRDKGTAHSAYYRVHVRE--------ADANAA-DVLKGKA-------------- 412
K I+F D Y+++++ E D N D +K A
Sbjct: 432 KSFSILFSDIVRNCIEYFQLYINEEKVAYSECGDVNKVYDNMKKFAKNKTKIVYDKYNYT 491
Query: 413 -SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN---FPLRVENPHV 468
S+ +S CF+ ++ + +V S+I+TSGTLSP++ F+++L N F +EN HV
Sbjct: 492 MSKNISLLCFSATASLCGIIKEKVNSVIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHV 551
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I S Q++ G + + LL S+Y NR + Y + LGN I ++ +P G+LIFF SY
Sbjct: 552 IKSHQLFVGCMTHYNNQILL-STYENRSNDNYMKALGNCIFDLIICIPYGVLIFFSSYSS 610
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVF 588
M + + WK I+E+I +K VEP +++ ++ Y +K GA+
Sbjct: 611 MTETVNAWKKFK------IFEKINSYKTIFVEPNKAAELKDILDQYENIIK-KKRKGAIL 663
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD-LQAQSQGGEY---- 643
VCRGK+SEG+DF D R V+I G+P+ + D K+ K+E+LD + +S G +
Sbjct: 664 MGVCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKKEFLDNFKYESSGNDMIGGA 723
Query: 644 -------KETKLSFLS-GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
T LS +S G WYN++A R++NQ++GRVIRH++DYG+I F D RF++ R
Sbjct: 724 NGGGVQSNNTTLSNISKGNKWYNEEAMRSINQSIGRVIRHKNDYGSIFFLDSRFSNNQRI 783
Query: 696 SQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGD 744
+IS W++ H + Y + + +FF + NL L + +G+
Sbjct: 784 KEISKWVRTHFRIYRDIEQIQSDIDKFFELFKGIQQNNLDLSASASAGE 832
>gi|156102350|ref|XP_001616868.1| DNA repair helicase [Plasmodium vivax Sal-1]
gi|148805742|gb|EDL47141.1| DNA repair helicase, putative [Plasmodium vivax]
Length = 1103
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 267/808 (33%), Positives = 411/808 (50%), Gaps = 105/808 (12%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I ++V FP+E YDCQ YM V+ +L+ K NA+LESPTGTGKTLCLLCA++++ +
Sbjct: 21 YTINDVEVYFPYELYDCQYNYMLSVLNALKRKENAILESPTGTGKTLCLLCASISYLVDV 80
Query: 64 ----GSFSTLGSQVNNQISGSQSSV------NSSQSGD-------SKLPTILYTSRTHSQ 106
G+FS N I+ ++ ++ N + G S P I+Y SRTHSQ
Sbjct: 81 LEKKGAFSE-----NINITENKKNISFDFKENENSKGSPAKVAPPSDFPKIIYASRTHSQ 135
Query: 107 LRQVIQELKT-------SNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTN 159
L+QVI+ELK Y+ ILGSR+QLC+H +G+ NN C+ K G
Sbjct: 136 LKQVIKELKNVYFIKNNEKYKLLTTILGSRDQLCVHNINYNYKGTMLNNMCKRTRKNG-- 193
Query: 160 RRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGR------TFGPCPYFMTRELQKTVDIV 213
C +H+ + Y+ HL P+D+E L IG+ CP++ TRE+Q ++
Sbjct: 194 -ECMYHNGLK-YLYKLKHLFTTPMDVETLSEIGKGNSVGQNIHFCPFYATREIQNECHVI 251
Query: 214 FAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNC 273
PYNYL + RK L + +NSI+I DE HN+E + +A SF + L + K
Sbjct: 252 LLPYNYLFEESTRKILKLNLENSIIIIDEGHNIENVAEEAVSFKIRDSELNLFLEGIKAT 311
Query: 274 IDI--SSTRRGQSSDETLNPDNFAILR----ALL--LKLEKRIAEVPINSKELGFTKPGP 325
+ + + + + +N D IL AL+ L E+ KE T G
Sbjct: 312 LTVLDKVNDVDKETKDKINVDELFILNRSITALIAWLDNERLEKNEKNKIKEKHKTYEGK 371
Query: 326 YIYELLA--DLNITQ---ETAYKLID-IVEVAAELLQEDKLQNKKSTTACR-IESISNIL 378
I+++ ++NIT+ E + L+ +VE+ + + K+ R I +I N+
Sbjct: 372 QIFDIFEKNNINITKDNFENFHTLLSSMVELLNRYINDFKITQMDVKNINRYISTIDNVR 431
Query: 379 K---IIFRDKGTAHSAYYRVHVRE--------ADANAA-DVLKGKA-------------- 412
K I+F D Y+++++ E D N D +K A
Sbjct: 432 KSFSILFSDIVRNCIEYFQLYINEEKVSYSECGDVNKVYDNMKKFAKNKTKIVYDKYNYT 491
Query: 413 -SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN---FPLRVENPHV 468
S+ +S CF+ ++ + +V S+I+TSGTLSP++ F+++L N F +EN HV
Sbjct: 492 MSKNISLLCFSATASLCGIIKEKVNSVIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHV 551
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I S Q++ G + + LL S+Y NR + Y + LGN I +I +P G+LIFF SY
Sbjct: 552 IKSHQLFVGCMTHYNNQILL-STYENRSNDNYVKALGNCIFDIIICIPYGVLIFFSSYSS 610
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVF 588
M + + WK I+E+I +K VEP ++S ++ Y +K GA+
Sbjct: 611 MTETVNAWKKFK------IFEKINSYKTIFVEPNKASELKDILDQYENIIK-KKRKGAIL 663
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD------------LQA 636
VCRGK+SEG+DF D R V+I G+P+ + D K+ K+E+LD A
Sbjct: 664 MGVCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKKEFLDNFKYENAASDMMGGA 723
Query: 637 QSQGGEYKETKLSFLS-GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
G + T LS +S G WYN++A R++NQ++GRVIRH++DYG+I F D RF++ R
Sbjct: 724 NGGGAQSNSTTLSNISKGNKWYNEEAMRSINQSIGRVIRHKNDYGSIFFLDSRFSNNQRI 783
Query: 696 SQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+IS W++ H + Y + + +FF
Sbjct: 784 KEISKWVRTHFRIYRDIEQIQSDIDKFF 811
>gi|168030243|ref|XP_001767633.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681162|gb|EDQ67592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1378
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 272/846 (32%), Positives = 394/846 (46%), Gaps = 159/846 (18%)
Query: 2 PTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNK--------CNALLESPTGTGKTLCLL 53
P+ +I GI V+FP++ Y QL +M KV+ +L+ NALLESPTG+GKTL LL
Sbjct: 6 PSLRICGIPVDFPYKPYGTQLAFMGKVLAALEQSRHSHRSCSVNALLESPTGSGKTLALL 65
Query: 54 CATLAWRKSLGSFSTL------------GSQVNNQISG---------------------- 79
CATLAW+K + L G V+ +S
Sbjct: 66 CATLAWQKQFPALPLLPSAPADPLLAGGGFIVDEPLSVLAPYSTAELNHYPFSFQTYNAR 125
Query: 80 ---SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHR 136
S N+ +S + K+P I Y SRTH+Q+ QVI+EL+ + Y M +LG+R+ C ++
Sbjct: 126 HWLSTGRSNTQKSKNRKVPMIYYASRTHTQITQVIRELRKTKYHVSMAVLGARKHYCTNK 185
Query: 137 EVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHL---GDEPI-DIEDLVNIG 192
S++R + + C+ L K R C H V +K++P L G I DIEDLV +G
Sbjct: 186 --SVVRKNNVDEDCKLLMKD-EERSCPHFKNVMK-LKSHPSLQKGGANNIHDIEDLVELG 241
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
C YF R L DIVF PYNY++DP R + V + +I++ DEAHN+E + +
Sbjct: 242 HKVKGCAYFAARALATEADIVFCPYNYILDPIIRSAMEVNLQGAIVVLDEAHNIEDVARE 301
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
A S DL + LL E + +SDET D ++ L ++ I
Sbjct: 302 AGSIDLETSLLQDLRLELEQL---------ATSDET--SDIYSPLLEMVQAWLDWIYHQE 350
Query: 313 INSKELGFTK-----PGPYIYELLADLNITQETAYKLIDIVE--VAAELLQEDKLQNKKS 365
+L F G + L ET L++ + + A ++ + +
Sbjct: 351 KCLSKLDFEHYASSWRGSKAIQELRLAGTCLETFQVLLECSKKAIGAASNPDETVNHLSG 410
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
IE + + LK + ++ G Y V R + + G + T+S WC NPG+
Sbjct: 411 RATIAIEGLFSALKFMLQENGRRAGDYQLVVRRFVKRDEGLAVTGWVT-TVSLWCLNPGV 469
Query: 426 AMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI---------------- 469
++ + + SIILTSGTLSPMDSFA EL + F ++E PHV+
Sbjct: 470 VFEDIASV-TRSIILTSGTLSPMDSFASELGIPFEFQMEAPHVVDMEKQVLLLEPYATIC 528
Query: 470 ----------------------TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNT 507
+ Q+WA V GP LN+SY+N D ++ LG
Sbjct: 529 CMCILRVVKLIIFPQAAMCSRFSRYQVWAAAVSTGPDNVSLNASYKNADGYSFQDALGVV 588
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR-QSSL 566
+ + ++VPDG L FFPSY +D+ A WK+T W R+ K+ +EPR +
Sbjct: 589 LEEVFKVVPDGALTFFPSYKFLDKLCARWKSTGQ------WGRLSSVKELFLEPRGNNDQ 642
Query: 567 FPLAIEDY-----------------MAKLKDTST-----------SGAVFFAVCRGKVSE 598
F L ++D+ + K +D T GA F AVCRGKVSE
Sbjct: 643 FELILQDFYNSINSDRTPGRNRKVGVEKNRDVKTRGTPRSTGRKAGGAAFLAVCRGKVSE 702
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G+DF+D R VV F D +V LK++Y + LSG++WY
Sbjct: 703 GIDFSDRNARIVV----SFVVRKDIQVTLKKQY---------NQENRVIKKLLSGDEWYC 749
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYT 718
QQ RA+NQAVGR IRHR+DYGAI+ D+RF P +S W++ I+ Y F D +
Sbjct: 750 QQTFRALNQAVGRCIRHRNDYGAILLLDDRFKRPGNIQYMSKWLRNSIRQYESFRDSLDG 809
Query: 719 LTRFFR 724
L FF+
Sbjct: 810 LKEFFK 815
>gi|359491914|ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
Length = 1255
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 258/798 (32%), Positives = 385/798 (48%), Gaps = 114/798 (14%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATLA 58
Y I GI VEFP++ Y QL +M +VI +L C+ALLESPTGTGK+L LLC+ LA
Sbjct: 14 YHIGGIAVEFPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSALA 73
Query: 59 WRKSLGSFSTLGSQVNN-----------------------------QISGSQSSVNSSQS 89
W+K+ + G N+ + S S+ N
Sbjct: 74 WQKNYRPKNMNGDVSNSKPDPEALSDPLGHGGGFVPETEPSSIPAPENSEPASAANGKNK 133
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNA 149
+ PTI Y SRTH+Q+ QVI+E + + YR M +L SR+ C +R+++ + +
Sbjct: 134 KKKRKPTIFYASRTHTQISQVIREYRKTAYRVPMAVLASRKHYCTNRKINA--KANIDEE 191
Query: 150 CRFLCKK---GTNRRCNHHSRVADYMKNNPHLGD----EPIDIEDLVNIGRTFGPCPYFM 202
C+ L + G N H +K +P L E DIEDLV +G+ C Y+
Sbjct: 192 CKLLVRDQDFGCPEFKNMHK-----VKGHPSLQKGGCHEAHDIEDLVKVGQVVKGCAYYA 246
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
R++ +VF PY+Y+I+P R + ++ + +ILI DEAHN+E + DA S D+ +
Sbjct: 247 ARDMADNAQLVFCPYSYIINPVIRGAMELDIEGAILILDEAHNIEDMARDAGSVDVEEDV 306
Query: 263 LTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK 322
L T GQ L P + I + L + I+ I+ K+ K
Sbjct: 307 LHKL-----------QTELGQ-----LCPADAMIYQPLYEMTQDIISW--IDRKKNTLEK 348
Query: 323 ----------PGPYIYELLADLNITQETAYKLIDIVE--VAAELLQEDKLQNKKSTTACR 370
G L + NI+Q++ L + + A + E ++ + +
Sbjct: 349 REFQHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRVAHLSGMSVIT 408
Query: 371 IESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEF 430
+E + + L F + G H+ Y++ ++ A + G + T S WC NP + +
Sbjct: 409 LEGLYSALSYFFSENGL-HTVDYQLALQRYVKKDAGSVAGSWTCTFSLWCLNPAVVFRGI 467
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLN 489
+ L + S+ILTSGTLSPM SF+ EL + F +E PHVI Q+WA I P Y LN
Sbjct: 468 ADLSL-SVILTSGTLSPMHSFSSELGVQFGTCLEAPHVIDIESQLWAAIFSTSPGNYPLN 526
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN------ 543
+SY+ D+ ++ LG ++ I +IVP G L+FFPSY LM++ + W+ T +
Sbjct: 527 ASYKTADAYAFQDALGKSLEEIFKIVPGGTLVFFPSYKLMEKLCSRWRETGQWSQLNEQK 586
Query: 544 -----------------LTTIWERICKHKKPVV-EPRQSSLFPLAIEDYMAKLKDTSTSG 585
L +E + + KP + R++ L+ D ++ G
Sbjct: 587 FLFIEPRGGSQDDFEPILKAYYESVRRGTKPTLGRKRRTKKMDLSQSDEKESQDNSKKKG 646
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKE 645
A F AV RGKVSEG+DF+D RAV+I G+PF + D +V K++Y D+ YK
Sbjct: 647 AAFLAVFRGKVSEGIDFSDENARAVIIVGIPFPNVHDIQVAQKKKYNDM--------YKS 698
Query: 646 TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPH 705
+K LSG +WY QA RA+NQA GR IRHR DYG II DERF + IS W++
Sbjct: 699 SK-DLLSGNEWYCHQAFRALNQAAGRCIRHRFDYGGIILLDERFREDRNTAYISKWLRKS 757
Query: 706 IQCYSKFGDVVYTLTRFF 723
I+ Y F + L FF
Sbjct: 758 IKQYESFDMSLERLKSFF 775
>gi|82752532|ref|XP_727340.1| DNA repair helicase [Plasmodium yoelii yoelii 17XNL]
gi|23483134|gb|EAA18905.1| DNA repair helicase, putative [Plasmodium yoelii yoelii]
Length = 1069
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 275/884 (31%), Positives = 433/884 (48%), Gaps = 103/884 (11%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I ++V FP+E YDCQ YM V+ +L+ K NA+LESPTGTGKTLCLLCA++++ ++
Sbjct: 21 YTINDVEVCFPYELYDCQYNYMLSVLNALKKKENAILESPTGTGKTLCLLCASISYLVNV 80
Query: 64 ----GSFS---TLGSQVNNQISGSQSSVNSSQSG-DSKLPTILYTSRTHSQLRQVIQELK 115
G F+ + +N G + + N + + P I+Y SRTHSQL+QVI+ELK
Sbjct: 81 LEKKGHFNESINIRENKSNVSFGFKENDNGPKKAIKADYPKIIYASRTHSQLKQVIKELK 140
Query: 116 T-------SNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
Y+ ILGSR+QLC+H +G+ NN C+ + K G C +H+ +
Sbjct: 141 NVYFIKNNEKYKLLTTILGSRDQLCVHNISYNCKGTMLNNMCKRVRKSG---ECMYHNGL 197
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGR-------TFGPCPYFMTRELQKTVDIVFAPYNYLI 221
K HL P+D+E L IG+ CP++ TRE+Q ++ PYNYL
Sbjct: 198 KHLYKY-KHLFTTPMDVETLNEIGKGNNSVGQNIHFCPFYATREIQNECHVILLPYNYLF 256
Query: 222 DPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
+ R+ L ++ +N I+I DE HN+E + +A SF + L + K + I
Sbjct: 257 EENTRRILKLDLENCIIIIDEGHNIENVAEEAVSFKIRDSDLNLFLESIKATLTILEKVN 316
Query: 282 GQSSD--ETLNPDNFAILR----ALLLKLEKRIAEVPINSK--ELGFTKPGPYIYELLAD 333
+ E +N D IL +L+ L+ E K E T G I+++ +
Sbjct: 317 DIDKEIQEKINVDELFILNRSINSLITWLDNERLERNDKKKIKERHKTYEGNKIFDIFEN 376
Query: 334 LNITQ-----ETAYKLI-DIVEVAAELLQEDKLQNKKSTTACR-IESISNILK---IIFR 383
NI E L+ +++E+ + + + KL + I +I N+ K I+F
Sbjct: 377 NNINISKSNFENFNNLLSNMIELLNKYINDFKLSQMDVKNVNKYIATIDNVKKAFSILFS 436
Query: 384 DKGTAHSAYYRVHVREA-----DANAADVLKGKA--------------------SRTLSW 418
D Y+++++ E D+N + + S+T+S
Sbjct: 437 DIVKNCIEYFQLYINEEKVLYNDSNDPNKVYDHMKKFTKIKTKIGYDNQNNYTMSKTISL 496
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELK---LNFPLRVENPHVITSKQIW 475
CF+ ++ + +V SII+TSGTLSP++ F+++L +F +EN HVI S Q++
Sbjct: 497 LCFSATASLCGIIKEKVNSIIVTSGTLSPVEPFSKQLSGSYFSFHHILENDHVIKSHQLF 556
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
G + + LL S+Y NR + Y + LGN I +I +P G+LIFF SY M + +A
Sbjct: 557 VGCMTHYNNQLLL-STYENRSNENYIKALGNCIFDIIACIPFGVLIFFSSYSSMTETVAT 615
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGK 595
WK I+++I +K VEP +++ + Y +K GA+ VCRGK
Sbjct: 616 WKKLK------IFDKINSYKTIFVEPNKAADLKDILFQYENIIK-KKRKGAILMGVCRGK 668
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD----LQAQSQGGEYKETKLSFL 651
+SEG+DF D R V+I G+P+ + D K+ KRE+LD +S +
Sbjct: 669 ISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKREFLDNFKSEITESNNSSETNNDNNTS 728
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
G WYN++A R++NQ++GRVIRH+ DYGAI+F D RF++ R +IS W++ H + Y
Sbjct: 729 KGNKWYNEEAMRSINQSIGRVIRHKDDYGAILFLDSRFSNNQRIKEISKWVRAHFRVYRD 788
Query: 712 FGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRELKPV-------DLLDKISLEEVPS 764
+ + +FF E G NLK + ++ R + D +KI E S
Sbjct: 789 IDQIQNDIEKFF--ELFKGINNLKTEQANINNSQRSGEKENGGYGMNDSFNKIGGNEESS 846
Query: 765 STPAVD---QACYSLHEVKNRNTSSHSGEIVPANRSSLSPYKGI 805
+ Q CY ++N + H + N+ +P K I
Sbjct: 847 IMKQIGKNFQDCY----IQNTKQNKHG---ISENKFVFNPTKKI 883
>gi|308806570|ref|XP_003080596.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
gi|116059057|emb|CAL54764.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
Length = 1045
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 248/788 (31%), Positives = 397/788 (50%), Gaps = 104/788 (13%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I G+++ FP Y Q+ M +VI+++ +K AL+ESPTG+GK+L LLC+ LAW + + S
Sbjct: 41 INGVEIRFPLVPYASQIAVMSQVIRAVTSKQCALVESPTGSGKSLALLCSALAWCEKMAS 100
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSK-------------LPTILYTSRTHSQLRQVIQ 112
G SG++ S + + P + Y +RTHSQ+ QV+
Sbjct: 101 ----GEDEGWGTSGAERGAGSGEMAEENRGGRNGRGRQKTLTPKVFYATRTHSQIAQVVG 156
Query: 113 ELKTSNYR-PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCK-KGTNRRCNHHSRVAD 170
EL ++Y+ + V+L SRE C+++ S + N CR L R C H + A
Sbjct: 157 ELARTSYKSARTVVLASREHYCVNK--SAKKSGNVNEECRKLMDVSAEGRGCYHAGKAAS 214
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
+ + +P+DIEDLV +GR CPYF ++ + ++ ++VF PYNY++DP R +
Sbjct: 215 MLAEHAKNQVDPLDIEDLVTLGRMKKGCPYFASKIMAESAELVFCPYNYILDPRTRAAMD 274
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLN 290
++ + S++IFDEAHN+E +AAS + + + K RR T+N
Sbjct: 275 IDIEGSLIIFDEAHNIEDTAREAASEETWLEEIAYTVERLKEV-----RRRA-----TVN 324
Query: 291 PDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYEL-------------LADLNIT 337
+L + L + +S + + P +E L ++ +T
Sbjct: 325 LIETELLMKTMNGLYEWFLRFCDDSSDCYGLQQNPQAFETCSATIRGEQSLQALENIGLT 384
Query: 338 QETAYKLIDIVEVAAELLQEDKLQNKK--STTACRIESISNILKIIFRDKGTAHSAYYR- 394
+ + +++ + + QE+K ++ E + N ++ + KG A + YR
Sbjct: 385 RSSVSVVMEALVTVTKHNQENKDPKERVPGGVFATCEKVLNPIRFLL-SKGEATARDYRI 443
Query: 395 VHVREADANAADVLKGKASR----------TLSWWCFNPGIAMQEFSRLE-VGSIILTSG 443
V + D + K+S+ +++W NP +A ++ + S+ILTSG
Sbjct: 444 VFTKTIDPERVATTQHKSSQLKRLPIDEVVKINFWALNPALAFRDLVGEDGARSVILTSG 503
Query: 444 TLSPMDSFAQELKLNFPLRVENPHVITSK-QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
TL+P++SFA EL + FP+R+E H I K Q++ +V +GP+ +N+ +++R ++
Sbjct: 504 TLAPLNSFASELGVEFPIRLEAQHCIDMKRQVYGSVVGIGPNNVPMNAGFKSRSDYGFQD 563
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH--KKPVVE 560
ELG ++ A++ P G+L+FFPSY LMD I W+ T +W+ I K K+ E
Sbjct: 564 ELGTSLKEWAQVTPHGMLMFFPSYSLMDNIIRRWRETG------MWQTIEKASGKRMFQE 617
Query: 561 PRQSSLF----PLAIEDYMAKLKDT-------------------STSGAVFFAVCRGKVS 597
P +SS PL +E M K D + GA+ FAVCRGK+S
Sbjct: 618 PSKSSHNYGKKPLTLEQIMVKYYDAIAKSVRAAKHPYAPAPETATCRGAILFAVCRGKIS 677
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EG+DFAD RAV+ G+P+ + D V KR Y D + + QG LSG WY
Sbjct: 678 EGIDFADANARAVISVGIPYPNIKDSLVAEKRSYND-EGRGQG---------LLSGSQWY 727
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI--QCYSKFGDV 715
+QQA RA+NQAVGR +RHRHD+GAII DERF + S + W++P I ++F D
Sbjct: 728 DQQAYRALNQAVGRCLRHRHDHGAIILVDERFNQRNIHS-LPKWLRPAIVHNPGAQFADQ 786
Query: 716 VYTLTRFF 723
+ +L +FF
Sbjct: 787 LASLKQFF 794
>gi|145349251|ref|XP_001419051.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579282|gb|ABO97344.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1067
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 252/777 (32%), Positives = 407/777 (52%), Gaps = 91/777 (11%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I +V FP Y Q+ M V+++ + AL+ESPTG+GKTL LLCA LAW +S
Sbjct: 38 IASCEVRFPLTPYKSQVQVMSAVVRAARRGTCALVESPTGSGKTLALLCAALAWSESESE 97
Query: 66 FSTLGSQVNNQISGSQSSVN--SSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM 123
+++ + + + G+ K P I Y +RTH+Q+ Q++ EL + Y+P
Sbjct: 98 RREDVGVDDDEDGEEDEARKRETKRIGNGKPPKIYYATRTHAQIAQIVGELSRTAYKPHT 157
Query: 124 VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRR----CNHH----SRVADYMKNN 175
V+L SRE C+++ S +G N CR L G C + S++A KN+
Sbjct: 158 VVLASREHYCVNK--SARKGGDVNAECRRLMDAGAAGGDGKGCFYSGQGASKLASLAKNH 215
Query: 176 PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKN 235
P + +DIEDLV +G + CPYF ++ + ++ +++F PYNYL+DP R + ++ +
Sbjct: 216 P----DALDIEDLVKMGTSKKGCPYFASKIMAESAELIFCPYNYLLDPRTRSAMDIDIEG 271
Query: 236 SILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID-ISSTRRGQSSDETLNPDNF 294
S++IFDEAHN+E +AAS ++ + + N ID +S RR +++ + +
Sbjct: 272 SLIIFDEAHNIEDTAREAASEEI-------ILDDVANAIDRLSEMRRRATANVS---ECE 321
Query: 295 AILRALLLKLEKRIAEVPINSKELGFTKP---------GPYIYELLADLNITQETAYKLI 345
+LR++ + I S G + G I + LA+ +T+E+ +++
Sbjct: 322 LVLRSMKGVYDWFIGFCDEKSPSYGLKQAQEALSAMVRGEQILQTLAEAGLTEESVLEVM 381
Query: 346 DIVEVAAELLQEDKLQNKKSTTAC--RIESISNILKIIFRDKGTAHSAYYRV---HVREA 400
+ V + QE+K ++ + E + N +K + +G + Y++ RE+
Sbjct: 382 RALGVITKYNQENKDPKERVAGSVFNTCEKVLNPIKFLL-SRGEVTARDYKIVFTKTRES 440
Query: 401 D-ANAADVLKGKASR-------TLSWWCFNPGIAMQEFSRLEVG--SIILTSGTLSPMDS 450
D + + + +R +++W NP +A +E G S++LTSGTL+P++S
Sbjct: 441 DRVVSTQRVNSELNRLPVEELVKINFWALNPALAFRELVSENGGARSVVLTSGTLAPLNS 500
Query: 451 FAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIV 509
FA EL + FP+R+E PH + +Q+W GIV GPS LN+ Y++R ++ ELG +
Sbjct: 501 FASELGVPFPIRMEAPHCVDMDRQVWGGIVAAGPSNIALNAGYKSRGDTSFQDELGACLR 560
Query: 510 NIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLF-- 567
++A++ P GLL+FFPSY L++ + W+ T G L I + KK EP +S +
Sbjct: 561 DVAKVTPHGLLMFFPSYSLLETIVRRWRET--GLLRAIEQ--ASGKKIFQEPGKSCSYGK 616
Query: 568 -PLAIEDYMAKL-------------------KDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
P+ +E + K + GA+ FAVCRGK+SEG+DFAD
Sbjct: 617 KPVTLETVLEKYYSAVATSVKAAKHPYAPAPANAKCRGAILFAVCRGKISEGIDFADANA 676
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
RAV+ G+P+ + D V KR Y ++ G ++ LSG WY+QQA RA+NQ
Sbjct: 677 RAVICVGIPYPNIKDALVAAKRSY------NEEGAHR----GLLSGSKWYDQQAFRALNQ 726
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ-CYSKFGDVVYTLTRFF 723
AVGR +RHRHD+GAI+ D RF + S + W++P +Q S+FGD V +L FF
Sbjct: 727 AVGRCLRHRHDHGAIMLVDSRFNN-SNIQALPKWLRPAMQKSASRFGDQVKSLENFF 782
>gi|403361814|gb|EJY80616.1| hypothetical protein OXYTRI_21994 [Oxytricha trifallax]
Length = 957
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 244/729 (33%), Positives = 360/729 (49%), Gaps = 159/729 (21%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW----RKSLG 64
++V FPF+ Y CQ+ +M K+I SL+ NALLESPTGTGKTL LLCA+LAW R+ G
Sbjct: 43 VEVMFPFKPYQCQINFMAKLINSLKLGDNALLESPTGTGKTLSLLCASLAWLKNEREKNG 102
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMV 124
F S + I+YTSRTHSQL QV +ELK + Y P+ +
Sbjct: 103 RFP------------------PSLTDKKDYIQIIYTSRTHSQLSQVQRELKNTAYNPRSL 144
Query: 125 ILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPID 184
+L SR+ +C+H E KN ++
Sbjct: 145 LLASRDHMCVHAE----------------------------------FKN--------LN 162
Query: 185 IEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH 244
IE++ +G CPYF ++ DI+F PYN+LIDP R+ ++KNSI+IFDEAH
Sbjct: 163 IEEMCKLGEEMVICPYFGNKDRAAGADILFMPYNFLIDPKIREIFEFKFKNSIIIFDEAH 222
Query: 245 NLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR----GQSSDETLNPDNFAILRAL 300
N+ DA+SFDL + L ++E + D R S++T++ L +
Sbjct: 223 NVPQQAEDASSFDLDTKQLEYVVNELQKLEDERLVRLDFNFNSKSEDTIS------LIQM 276
Query: 301 LLKLEKRIAEVPINSKEL-GFT------------KPGPYIYELLADLNITQETAYKLIDI 347
L KL+ I +N + GF PG YI++++ + + + + + +
Sbjct: 277 LKKLKSYIDNYELNQNNVKGFNINKQYINVASLVMPGRYIFDIIFNGTLINDQSVENEES 336
Query: 348 VEVAAE-------------LLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
E+ E LL +LQ ++ T+ +E++ ILK I
Sbjct: 337 FEINLETDWTRWKQAIENCLLDITQLQYIETRTS--LETLFEILKKIMNLHQNGPLSEKN 394
Query: 384 --------DKGTAHSAYYRVHVREADANA----------ADVLKGKASRTLSWWCFNPGI 425
++ A Y ++ E DAN ++ + R L++WCFN GI
Sbjct: 395 EELKQQQYNENDADDYYVYLYDEEDDANKQMQFNKKYKPKQFMQRTSKRILAFWCFNAGI 454
Query: 426 AMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSG 485
+E +LE SIILTSGTL+PM+SF EL+L F R+ENPHVI++ Q+ ++ G
Sbjct: 455 CFRELQKLEPKSIILTSGTLTPMNSFQAELQLKFNQRIENPHVISTDQVSISVLTKGIKQ 514
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
N SY+ R++ + +LG +I I+ I P G+L+FFPSY M +C W+
Sbjct: 515 NCFNFSYQYRENEKALIDLGVSIAQISGITPGGILVFFPSYRYMRRCYELWEQN------ 568
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL---KDTSTSGAVFFAVCRGKVSEGLDF 602
+PR+ S + ++ Y + D S +G + +VCRG++SEGLDF
Sbjct: 569 --------------KPRELSNYKNVMDGYYRSIFEKTDDSLNGGILLSVCRGRISEGLDF 614
Query: 603 ADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQAS 662
+D+A R V+I G+PF +TDPKV LKR+YLD + Q + L LSG+DWYNQ
Sbjct: 615 SDNAARCVIIVGIPFPLLTDPKVILKRDYLDRKLQQNNSD-----LVRLSGKDWYNQCGI 669
Query: 663 RAVNQAVGR 671
RAVNQA+GR
Sbjct: 670 RAVNQAIGR 678
>gi|50726319|dbj|BAD33894.1| putative BRCA1 interacting protein C-terminal helicase 1 [Oryza
sativa Japonica Group]
Length = 1366
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 255/781 (32%), Positives = 392/781 (50%), Gaps = 80/781 (10%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATL 57
Y++ G+ VEFP++ Y QL +M +VI +L Q + +ALLESPTGTGK+L LLC+ L
Sbjct: 24 VYQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSAL 83
Query: 58 AWRK----------SLGSFSTLGSQVNNQISGSQS-SVNSSQSGDSKLPTILYTSRTHSQ 106
AW++ + F G V + + V + +PTI Y +RTH+Q
Sbjct: 84 AWQRHYPLRAPPAAAPDPFLHGGGFVPDDTQKQATPGVPEKATRKKNVPTIYYATRTHAQ 143
Query: 107 LRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHS 166
+ QV++E + ++YR +M IL SR+ C+++ V + + C+ L + + C +
Sbjct: 144 ITQVVREYRKTSYRVRMAILASRKHYCVNKNVCM--SGNIDELCKSLLDD-SAQGCPEY- 199
Query: 167 RVADYMKNNPHLG----DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+ A + +P L E DIEDLV +GR CPYF + + + +VF PYNYLI
Sbjct: 200 KNAQKLSRHPSLQIGGCYEVHDIEDLVRVGRKVKGCPYFAAQTMAEAAQLVFCPYNYLIS 259
Query: 223 PWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG 282
P R+ + ++ + SI++ DEAHN+E I DA SFD+ + ++ + + G
Sbjct: 260 PIVRRAMDIDIRGSIIVLDEAHNIEDIARDAGSFDV----------DEESLLFLRQELEG 309
Query: 283 QSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIY--ELLADLNITQET 340
+DE + + L ++ L I E N ++ F P + E + +L T
Sbjct: 310 LVTDEAV-AKIYEPLHEVIQGLNGWIDEQGNNLQKNEFEHPASFWTGEEAMKELKYAGIT 368
Query: 341 AYKLIDIVEVAAELLQ-----EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRV 395
+ E A + ++ E + + +A +ES+ + L F + G + Y
Sbjct: 369 PVNFPVLQECATKAIKAASDAESEGVHLSGGSAMTLESLFSSLSYFFAENGRHSNDYQLA 428
Query: 396 HVREADANAADVLK------GKASRTLSW------WCFNPGIAMQEFSRLEVGSIILTSG 443
R A A+V+ + + W WC NP + ++ + L + S+ILTSG
Sbjct: 429 LQRFAKREGANVMSYDLIICNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTL-SVILTSG 487
Query: 444 TLSPMDSFAQELKLNFPLRVENPHVITS-KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
TLSPM SFA EL + F +E PHVI + Q++A ++ GP+G LN+SYR + ++
Sbjct: 488 TLSPMGSFASELGVQFEACMEAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQD 547
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK-------HK 555
ELG T+ I R+VP G L+FFPSY L+++ W T T E + K K
Sbjct: 548 ELGATLEEICRVVPGGALVFFPSYNLLEKLQRRWSQTEPRGSTEELEPVLKGYYNAILGK 607
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV---VI 612
P + R + + ++++ GA F AVCRGKVSEG+DF+D R V V
Sbjct: 608 APPKKGRGGAKQIVKNRVTKDSSQESAKGGAAFLAVCRGKVSEGIDFSDDKARVVVSFVF 667
Query: 613 TGMPFAT---MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
+ F + D +V+LK+ Y D YK +K LSG +WY QA RA+NQA
Sbjct: 668 SSYVFYAPERINDVQVKLKKRYND--------SYKSSK-DLLSGNEWYCHQAFRALNQAA 718
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR--EER 727
GR IRH+ DYG II DER+ IS W++ I+ F + + LTRFF+ EE+
Sbjct: 719 GRCIRHKFDYGGIILIDERYQEERNIVYISKWLRNSIRNCGTFQETMDGLTRFFQNAEEQ 778
Query: 728 I 728
I
Sbjct: 779 I 779
>gi|449519585|ref|XP_004166815.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
homolog [Cucumis sativus]
Length = 1041
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 266/816 (32%), Positives = 397/816 (48%), Gaps = 116/816 (14%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATL 57
Y+I G+ VEFPF Y QL +M++VI +L + C+ALLESPTGTGK+L LLC++L
Sbjct: 24 VYRIGGVQVEFPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSL 83
Query: 58 AWRKSL--------------------------GSF---------STLGSQVNNQISGSQS 82
AW+K+ G F + GS V+ S
Sbjct: 84 AWQKNFKIKNQDANFCHTRPAPEAATNPLGFGGGFIPEVQPSSKNIKGSLVSTDTESSLP 143
Query: 83 SVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLR 142
N+ PTI Y+SRTHSQ+ QVI+E + + YR M +L SR+ LC + V R
Sbjct: 144 GPNNKIRKKKTAPTIYYSSRTHSQISQVIREYRKTAYRVPMAVLASRKHLCTNPRV---R 200
Query: 143 GSAQ-NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD----EPIDIEDLVNIGRTFGP 197
G + C+ L K + C+ + + +K +P L E DI+DLV G
Sbjct: 201 GKDNLDEKCKLLLKD-QDAGCSEF-KNGNKVKCHPTLQKGGRHEVHDIQDLVKTGEAVKG 258
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
C Y+ R + +VF PY+Y+I+P R+ +GV+ K++I+IFDEAHN+E I S D
Sbjct: 259 CSYYAARSMAYNAQLVFCPYSYIINPVIRRAIGVDVKDAIVIFDEAHNIEDIARHGGSVD 318
Query: 258 LSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE 317
+ L E + I+ + T + L++ + + + + E
Sbjct: 319 IEEDTLNKLQMELEQLCFINYLVYQPLYEMTQD------LKSWIDRRKTTLQEREFQHYV 372
Query: 318 LGFTKPGPYIYELLADLNITQETAYKLIDI----VEVAAELLQEDKLQNKKSTTACRIES 373
+T G + L + NITQ+ L++ + A+ + +D + + +E
Sbjct: 373 TCWT--GNHAQRELQEANITQQCFPILLECATKATKAASYTVSDDA--HLSGLSVLTLEG 428
Query: 374 ISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL 433
+ + L F G H + Y++ ++ + K + TLS WC NP + ++ L
Sbjct: 429 LFSSLTYFFSRNG-CHMSDYQLALQRYTKRDPEKACAKWTVTLSLWCLNPAVVFRDIGDL 487
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSSY 492
+ S+ILTSGTLSP++SF+ EL + F +E PHVI Q+W I+ +GP Y LN+SY
Sbjct: 488 SL-SVILTSGTLSPLNSFSSELGVRFGTSLEAPHVIDVESQVWPAIISIGPGNYPLNASY 546
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
+ D ++ LG ++ I I P G L+FFPSY LM++ W T W R+
Sbjct: 547 KTADGYAFQDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLRNRWSETGQ------WSRLN 600
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLK---DT------------------------STSG 585
K VEP A ED+ + LK DT + G
Sbjct: 601 ARKSLFVEPCGG-----AQEDFDSILKGYYDTIRLGDNFAVGKKVKPDESYVFGCENPKG 655
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKE 645
A AV RGKVSEG+DF+D R V+I G+PF + +V LK+++ D +YK
Sbjct: 656 AALLAVFRGKVSEGIDFSDDNARVVIIVGIPFPDINGIQVALKKKFND--------KYKM 707
Query: 646 TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPH 705
+K + LSG +WY QQA RA+NQA GR IRH+ DYGAI+ DERF ++ IS W++
Sbjct: 708 SK-NLLSGNEWYCQQAFRALNQAAGRCIRHKFDYGAIVLLDERFQEERNRTYISKWLRKS 766
Query: 706 IQCYSKFGDVVYTLTRFFR--EERICGSTNLKLIKT 739
I+ + F + L FF +ERI T +L K+
Sbjct: 767 IKQFDNFEQSMEELKSFFSHIKERISNKTESELPKS 802
>gi|384246051|gb|EIE19542.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 1621
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 254/779 (32%), Positives = 384/779 (49%), Gaps = 130/779 (16%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL--------------------G 64
M KVIQ++ N+ NALLE+PTG+GKTL LLC+ L+W++ L G
Sbjct: 1 MAKVIQTVANRENALLEAPTGSGKTLSLLCSALSWQRKLKQEGYSEAWEGRPNIPDDGQG 60
Query: 65 SFSTLGSQVNNQI---------SGSQSSVNSSQSGDS-----KLPTILYTSRTHSQLRQV 110
+ G V SGS S + + LP I Y +RTHSQ+ Q
Sbjct: 61 QETPEGKSVKTPPEPISCTPPGSGSAGSTEGEVTPNGAPPREPLPRIFYATRTHSQIAQA 120
Query: 111 IQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD 170
SR C+H VS + + C L + +R C + + +
Sbjct: 121 -----------------SRSHYCVHSGVS--KKPNVDEECEKLLE---DRSCRYFNNLPK 158
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
+ + DIEDLV +G+ CPYF+ R++ + +++F PYNYLIDP R +G
Sbjct: 159 VLNGLATYVPQVHDIEDLVQVGKEIKACPYFVARKIAEHAELLFCPYNYLIDPVIRSSMG 218
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLS-SGLLTACISEAKNCIDISSTRRGQSSDETL 289
+ +++++IFDEAHN+E I DAAS ++ + ++ + C++ S E
Sbjct: 219 INIQHAVIIFDEAHNIEDISRDAASVEMERASMVDVQKAFEYKCLEADSR-------EIY 271
Query: 290 NP--DNFAILRALLLKLEKRIAEVPINSKELGFTK------PGPYIYELLADLNITQETA 341
P D F L K E P K+ G + G + E L + + +E
Sbjct: 272 GPLADAFGRFANWL----KERCERPDVRKQQGAGQRYEGITSGLQMREELEEAGLGKEQV 327
Query: 342 YKLIDI-VEVAAE-----------LLQED-----KLQN------KKSTTACRIESISNIL 378
L ++ V+ AE L +ED +LQN KK + S +L
Sbjct: 328 DLLHELYVKARAEEQKKEEPPAPALAEEDGASEHQLQNVASSQAKKKGAGFALGQTSRLL 387
Query: 379 KII-------FRDKGTAHSAYYR-----VHVREADANAADVLKGKASRTLSWWCFNPGIA 426
I+ D A +YR R + + D + G A + W C NP +A
Sbjct: 388 TILNLMYSSNVSDYRLALQRWYRSSQPRRRGRRREDDEEDEVAGWALQFCLW-CLNPAVA 446
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK-QIWAGIVPVGPSG 485
+ SIILTSGTLSP+DSFA EL +FP+R E PHVI ++ Q+WAG + GP
Sbjct: 447 FHSIA-AAARSIILTSGTLSPLDSFASELDTSFPVRFEAPHVINARLQVWAGSICAGPDD 505
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
+ ++Y + +++ +G +I IA IVPDGLL+F PSY ++D+ + WK +T
Sbjct: 506 VKIAATYEHSLKPDFQDSVGASIAAIAGIVPDGLLVFLPSYVMLDRLMERWK------VT 559
Query: 546 TIWERICKHKKPVVEPRQSS-LFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W ++ + K V EPR + F + D+ +++ GA+FFA+CRGKVSEGLDF D
Sbjct: 560 GVWAQLQQTKAIVCEPRGTGDAFDAVMSDFYTAIRE--GRGAIFFAICRGKVSEGLDFTD 617
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
RAV++ G+PF + D KV LK++Y D G+ ++ S L+G+ WY+QQA RA
Sbjct: 618 KNARAVIVVGIPFPNVKDTKVNLKKKYND------AGQRDRSR-SLLTGDQWYSQQAFRA 670
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+NQAVGR IRH+ DYGAI+ D RF++ + + +S W++ I + F + ++ FF
Sbjct: 671 LNQAVGRCIRHKLDYGAIVLLDRRFSNTANQRHLSRWVRTSINVHESFAPALESMKEFF 729
>gi|405960555|gb|EKC26471.1| Fanconi anemia group J protein [Crassostrea gigas]
Length = 1410
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 238/688 (34%), Positives = 356/688 (51%), Gaps = 95/688 (13%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACR 151
K+P I + +RTH Q+ Q+I+ELK + YR KM IL +RE CIH VS ++G +N C+
Sbjct: 190 KVPKIYFGTRTHKQIAQIIRELKKTAYREVKMTILAAREHTCIHPAVSQMKG--KNEGCK 247
Query: 152 FL-----CKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTREL 206
L CK N R DY+K E DIED V + + CPYF TR L
Sbjct: 248 ELLDGPGCK--FNDRLKRMPATQDYVKKQGLT--EAWDIEDFVGLSKNIKVCPYFATRGL 303
Query: 207 QKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ DIVF PYNYLIDP RK + + K+ ++I DEAHN+E D+A + L
Sbjct: 304 RSGADIVFCPYNYLIDPVIRKSMEISLKDQVVILDEAHNMEDTSRDSAGEKIGDDALEKA 363
Query: 267 ISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPY 326
++E I E L ++ + R L L I + N + + F +
Sbjct: 364 VNELDEMIKY----------EILTAEHLRV-RQLCAGLLGLIRDNQDNLQNMDFD----H 408
Query: 327 IYELLADLNIT-------------QETAYKLIDIVEVA--AELLQED---KLQNKKSTTA 368
Y+ + +I Q+ L + E A E + +D ++ S T
Sbjct: 409 EYKCWSSYDIVVRLEKIGAGPKHFQDMQQHLKAVFEEALDKETVVKDMSGRVVKISSATL 468
Query: 369 CRIESISNILKIIFRDKGTAHSAYYRVHVREA-----DANAADV-LKGKASR-------- 414
+E I +L +++D + YR+ V +A + N D+ L K R
Sbjct: 469 QTLEHIVKVLTYLYKDD-LKYVTDYRMAVVKATVYTRNPNTDDMWLNSKRRRGGQSMIPT 527
Query: 415 ---TLSWWCFNPGIAMQEFSRLEV-GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
TL++WC NPG+A FS L V S++LTSGTLSP++SF EL + FP+++E HVI
Sbjct: 528 TQLTLNFWCMNPGVA---FSDLSVCRSVVLTSGTLSPINSFESELGVPFPIKLEANHVIE 584
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
KQ+W G V GP G L + YR+ ++++++ ELG+ ++ + + VP G+L F PSY +
Sbjct: 585 DKQVWVGAVGQGPRGGTLEAVYRSVETLQFQDELGDLVLRVCQHVPHGVLCFVPSYSTLS 644
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--------- 581
+ W+ +T +WERI +HK+ +VEPR S + ED M + D+
Sbjct: 645 KLRNRWE------ITGLWERIKEHKEVMVEPRSSER--VDFEDIMRQFYDSVNMLQDQTE 696
Query: 582 -STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
+GA+F AV RGKVSEG+DFAD+ RAV+ G+P+ D +V+ K+EY ++ S+G
Sbjct: 697 GKKTGALFVAVFRGKVSEGMDFADNYARAVITVGIPYPNSKDVQVKYKQEYNNMYRLSRG 756
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ-IS 699
LSG +WY+ QA RA+NQA+GR IRHR D+GAII D RF K Q +S
Sbjct: 757 ---------LLSGSEWYDIQAFRALNQALGRCIRHRKDWGAIILVDNRFVRNQNKVQGLS 807
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFFREER 727
W++ + Y F + ++ +F ++ +
Sbjct: 808 KWVRRKVHTYQTFDSAITSIDKFTKDRQ 835
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
I G++V FP + Y Q MEKVI+ ++ + N LLESPTG+GK+L LLC+ LAW+
Sbjct: 26 IHGVEVVFPCKPYPSQFSMMEKVIKGIERRENCLLESPTGSGKSLALLCSALAWQ 80
>gi|380021224|ref|XP_003694471.1| PREDICTED: Fanconi anemia group J protein homolog, partial [Apis
florea]
Length = 878
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 240/742 (32%), Positives = 357/742 (48%), Gaps = 74/742 (9%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS-LG 64
I GI V+ P + Y CQ+ M K+IQ N LLESPTG+GKTL LLC LAW +G
Sbjct: 154 ISGIKVKLPVKPYSCQIAVMNKLIQGCVKGENCLLESPTGSGKTLALLCGVLAWHDHYIG 213
Query: 65 SFSTLGSQVNNQISGSQSSVNSS--QSGDS----------------KLPTILYTSRTHSQ 106
S NN+ Q S S DS K+P I Y +RTH Q
Sbjct: 214 EGKQTTSCENNEKDCCQESSKKCMLDSDDSYEDYEDLLEDAKGKKLKVPRIFYGTRTHKQ 273
Query: 107 LRQVIQELKTSNYR-PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHH 165
+ QV++EL+ + Y+ KM IL SRE CI + C L ++ C ++
Sbjct: 274 IEQVVKELRKTCYKHKKMTILSSREYTCIQNTTK-----NKTELCNELLDTAKHKGCPYY 328
Query: 166 SRVADYMKNN----PHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
+ G PI DIEDLV+IG+ CPYF R L T DI+F PYNY+
Sbjct: 329 NETNKKTIGTFWALERFGLRPIWDIEDLVDIGKEKESCPYFAARTLMDTADIIFCPYNYI 388
Query: 221 IDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTR 280
IDP R+ L ++ K+ ++I DEAHN+E I D +S L A E + +
Sbjct: 389 IDPNIRESLQLDMKDQVIILDEAHNIEDISRDVSSVSFREDHLQATAHECE------TLA 442
Query: 281 RGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQET 340
+ ++ D T + L+ LL + + ++ ++ + + Y +L++
Sbjct: 443 KQRAEDFT----TYDTLKTFLLNVMAFLKDMSLDKVDYN-NENRSSKYWTGVELSMFLMA 497
Query: 341 AYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA 400
K I + A E + K K ++ +I N++ I + YR V E+
Sbjct: 498 CNKAISDLNKAKEDNRMYKSITKPIISSSTKMTIENLMYTIRMITSKEYQNDYRACVIES 557
Query: 401 DANAADVLKGKA----------SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDS 450
+ A RTL C NPG+A + L IIL SGTL+P S
Sbjct: 558 TVKDFKHMSENAWISVKKCEQRVRTLKLVCMNPGVAFSPLA-LNARCIILASGTLTPTAS 616
Query: 451 FAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVN 510
F EL +F + HVI +Q++A +P GP+G LL ++Y+ ++ +++ ELG +++
Sbjct: 617 FQSELGTSFTHVLNTGHVIPKEQVYATCIPKGPNGILLKANYQIVNTWQFQDELGQVLLD 676
Query: 511 IARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLA 570
+ +P G+L FF SY +M+ + WK S IW +I K +EPR
Sbjct: 677 VCESIPHGILCFFSSYNVMNTQMERWKQNS------IWSKITSVKTVFIEPRHGGGLTDI 730
Query: 571 IEDYMAKLKDTST------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+ +Y ++ TST +GA+F AV RGKV+EG+DF D+ R VV G+P+A DP
Sbjct: 731 MNEYREVIEYTSTESKGRITGALFLAVFRGKVAEGIDFRDNEARCVVTVGIPYAVRKDPV 790
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
+ +K Y D+ S+G L G +WY+ QA RA+NQA+GR +RH HD+GA++
Sbjct: 791 IDMKMTYNDMNV-SKG---------LLRGSEWYSIQAYRALNQALGRCLRHIHDWGAVLL 840
Query: 685 CDERFAHPSRKSQISLWIQPHI 706
DERF K + W++ +
Sbjct: 841 VDERFLVSQNKENLPKWVKSMV 862
>gi|321471679|gb|EFX82651.1| hypothetical protein DAPPUDRAFT_48831 [Daphnia pulex]
Length = 720
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 225/659 (34%), Positives = 347/659 (52%), Gaps = 60/659 (9%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQNNACRFL 153
P I + +RTH Q+ QV++E + + Y + +M +L SRE CIH +VS R +N C+ L
Sbjct: 1 PKIFFGTRTHKQITQVVKEFRRTMYCKTRMTVLASREHACIHPDVS--RSFNKNEGCQQL 58
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIV 213
+ T+ + +R + + + + D DIEDLV +GR CPY+ +R+L + +IV
Sbjct: 59 NDQ-TSESNLYRTRGIEMLSKHVYGYDNGWDIEDLVGLGRKLQRCPYYASRDLMEQAEIV 117
Query: 214 FAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNC 273
F PYNYLIDP RK + + SI+I DEAHN+E AAS S +++ +
Sbjct: 118 FVPYNYLIDPAVRKRMHIPINGSIIILDEAHNIEDSARAAASGAFSQEDFRLALNDCEKV 177
Query: 274 IDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA-------EVPINSKE----LGFTK 322
++ + +S D A + ++ L +A E + KE L +
Sbjct: 178 TNVR-VKDQKSKDRLKQISKLAQFSSYMMNLMDGMAPKSSFDDEAIMTGKEFLDKLVLDE 236
Query: 323 PGPYIYELLADLNITQETAYKLID--IVEVAAELLQEDKLQNKKSTTACRIESISNILKI 380
GP I L+ I + ID +V+ LL +TT +E I+ +
Sbjct: 237 YGPNILSELS-FVIEEGEEEPEIDSKLVDPRLHLL---------ATTRATLEDFLTIVNL 286
Query: 381 IFRDKGTAHSAYYRV-------------HVREADANAADVLKGKASRTLSWWCFNPGIAM 427
+ D+ T H Y+V ++ + N + + L WC NP I +
Sbjct: 287 MLGDEQT-HLDDYQVAVARTSNFVIISNYLTQVFLNKFSSSPSRWTHVLKLWCLNPAIVL 345
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYL 487
++ R SII+TSGTLSP+DS+A EL ++F + +E HVI + ++W + GP
Sbjct: 346 KQI-RQTTRSIIVTSGTLSPLDSYASELGIDFMITLEASHVIPANRVWIASISQGPRSTK 404
Query: 488 LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTI 547
LN SY+ + EY+ ELG ++++ + +P G+L F PSY L+++ +A W++T +
Sbjct: 405 LNGSYKTTSTFEYQDELGRLMLSVCQTIPHGVLCFLPSYSLLEKLVARWQDTG------L 458
Query: 548 WERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
W+ + K V E R SS F ++D+ + ++D S SGA+ AVCRGKVSEGLDF D+
Sbjct: 459 WQHLSAIKTLVCESRNSSAFEETLKDFYSAIED-SQSGALMLAVCRGKVSEGLDFTDNNA 517
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
RAVV G+PF + D +V LKR+Y D K T S LSG +WY QA RA+NQ
Sbjct: 518 RAVVCVGIPFPYLKDKQVELKRKYND---------KKSTCSSLLSGSEWYEIQAFRALNQ 568
Query: 668 AVGRVIRHRHDYGAIIFCDERFAH-PSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
A+GR IRH+ D+GAI+ D+RFA P +Q+S W + I+ Y F +++ L+ F +E
Sbjct: 569 ALGRCIRHKGDWGAILLVDDRFAKTPRYVNQLSKWARSSIRHYDYFAPMLHYLSEFTKE 627
>gi|449519583|ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
Length = 1239
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 268/823 (32%), Positives = 391/823 (47%), Gaps = 130/823 (15%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATLA 58
Y I GI VEFPF Y QL +M +VI +L + C+ALLESPTGTGK+L LLC++LA
Sbjct: 25 YPIGGIQVEFPFRPYGSQLAFMGRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLA 84
Query: 59 WRKS-----------------------LG-------------SFSTLGSQVNNQISGSQS 82
W+K+ LG F+ L N IS ++
Sbjct: 85 WQKNYKIKNPDANPCHTKAAPEAATDPLGFGGGFIPEVQTPSKFACLYPDYPN-ISNARI 143
Query: 83 SVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLR 142
+ + PTI Y SRTHSQ+ QVI+E + + YR M +L SR+ LC + V R
Sbjct: 144 QLKKTA------PTIYYASRTHSQISQVIREYRKTAYRVPMAVLASRKHLCTNPYV---R 194
Query: 143 GSAQ-NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD----EPIDIEDLVNIGRTFGP 197
G + C+ L K C+ + A+ +K +P L E DIEDLV +G
Sbjct: 195 GKDNLDEECKLLLKDQI-AGCSEF-KNANKVKCHPTLQKGGCHEVHDIEDLVKVGEAVKG 252
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
C Y+ R + +VF PY+Y+I+P R + V+ K +I+IFDEAHN+E I S D
Sbjct: 253 CSYYAARSMADDAQLVFCPYSYIINPVIRGAMDVDIKGAIVIFDEAHNIEDIARHGGSVD 312
Query: 258 LSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE 317
+ L E ++ I S + T + ++ R L+ + V +
Sbjct: 313 IEEDTLNKLQMELEDLCPIDSLVYQPLYEMTQDLTSWIDQRKTTLQKREFQHYVTCWT-- 370
Query: 318 LGFTKPGPYIYELLADLNITQETAYKLIDI----VEVAAELLQEDKLQNKKSTTACRIES 373
G + L + NITQ+ L++ ++ A++ +D + + +E
Sbjct: 371 ------GNHAQRELQEANITQQCFPILLECATKAIKAASDTESDDA--HLSGLSVITLEG 422
Query: 374 ISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL 433
+ + L F G H + Y++ ++ + + TLS WC NP + ++ S L
Sbjct: 423 LFSSLTYFFSRNG-CHMSDYQLALQRYIKRDPGKAYAEWTVTLSLWCLNPAVVFRDISDL 481
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSSY 492
+ S+ILTSGTLSPM+SF+ EL + F +E PHVI Q+W ++ GP Y LN SY
Sbjct: 482 SL-SVILTSGTLSPMNSFSSELGVQFGTSLEAPHVIDVESQVWPAVISTGPGNYPLNGSY 540
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
+ D ++ LG ++ I I P G L+FFPSY LM++ W T W R+
Sbjct: 541 KTADGYAFQDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLQNRWSETGQ------WSRLN 594
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLK--------------------------------- 579
K VEPR A ED+ + LK
Sbjct: 595 ARKSLFVEPRGG-----AQEDFDSILKGYYDTIRLGDNFAIGKKSRGKKVKPNDSYVVGC 649
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
+ GA AV RGKVSEG+DF+D R V+I G+PF + D +V LK+++ D
Sbjct: 650 ENPKEGAALLAVFRGKVSEGIDFSDDNARVVIIVGIPFPNVNDIQVALKKKFND------ 703
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
YK +K + LSG +WY QQA RA+NQA GR IRH+ DYGAI+ DERF ++ IS
Sbjct: 704 --AYKMSK-NLLSGNEWYCQQAFRALNQAAGRCIRHKFDYGAIMLLDERFQEERNRTYIS 760
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFFR--EERICGSTNLKLIKTE 740
W++ I+ + F + L FF +ERI + +L +E
Sbjct: 761 KWLRKSIKQFDNFEQSMEELKSFFSHIKERISNNKESELPNSE 803
>gi|383856223|ref|XP_003703609.1| PREDICTED: Fanconi anemia group J protein-like [Megachile
rotundata]
Length = 935
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 245/747 (32%), Positives = 356/747 (47%), Gaps = 84/747 (11%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK---- 61
I GI V+FP + Y CQ+ M KVIQ N LLESPTGTGKTL LLC+ LAW
Sbjct: 197 ISGIKVKFPAKPYSCQMAVMNKVIQGCVKSENCLLESPTGTGKTLALLCSVLAWHDHHSD 256
Query: 62 ----SLGSFSTLGSQVNNQISGSQSSV---NSSQSGDSKLPTILYTSRTHSQLRQVIQEL 114
G F+ G+ V + SK+P I Y +RTH Q++QV +EL
Sbjct: 257 VNPIDDGDFNDCGAGVLYTCEAYDEEYLKKFDEPTKRSKIPKIYYGTRTHKQIQQVTREL 316
Query: 115 KTSNYR-PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR-----V 168
+ + Y+ KM IL SRE CI + C L +RC ++ +
Sbjct: 317 RKTAYKQKKMTILSSREHTCIQES-----NRNKTELCNDLLDPLKGKRCPFYNESNKKSI 371
Query: 169 ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ + DIEDLV IG+ G CPYF R L + DI+F PYNY+IDP R+
Sbjct: 372 NSFTSLEIRGVNSAWDIEDLVAIGKEEGICPYFAARNLMEFADIIFCPYNYIIDPDIRES 431
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDET 288
+ ++ K+ ++I DEAHN+E IC + AS L +E C ++ R
Sbjct: 432 MQIDLKDEVVILDEAHNIEDICREVASVAFREDQLVVVATE---CEALTKQRE------- 481
Query: 289 LNPDNFAI---LRALLLKLEKRIAEVPIN-SKELGFTKPGPYIY--ELLADLNITQ--ET 340
D+FA ++ +LKL K + + ++ + T PY ELL N+ E+
Sbjct: 482 ---DDFATYNTIKVYVLKLVKFMKTISLDIVDNITDTSSSPYWTGAELLELFNMHNLGES 538
Query: 341 AYKLIDIVEVAA-----ELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY--- 392
YK AA + +E ++ K + + + + F + Y
Sbjct: 539 VYKEFLAACNAAMADVNNMKEESRMHQKNLKPIISPSTQTTLGHLGFSMRMITTPQYVND 598
Query: 393 YRVHVREADANAADVL----------KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTS 442
YR V E L + +RTL C NPG+ + SR V IIL S
Sbjct: 599 YRACVIENTVKDFKFLAEDTWQTFKKQEHRARTLKLICMNPGVIFEPLSR-SVRCIILAS 657
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
GTL+P S+ EL F + HVI +Q++A + GP+G L ++Y+ +S ++
Sbjct: 658 GTLTPTASYQSELNTTFSHILNAGHVIPKEQVYATCISKGPNGIQLRANYQTVNSWGFQD 717
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
ELG ++ I +P G+L FF SY +M + WK+TS W I + K+ VEPR
Sbjct: 718 ELGLVLLRICESIPHGVLCFFSSYNVMYKQTERWKHTS------TWNEISRIKRVFVEPR 771
Query: 563 QSSLFPLAIEDYMAKLKDTST------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
S + +Y +++TS +G +F AV RGKV+EG+DF D+ R VV G+P
Sbjct: 772 HGSELEFIMNEYREVIENTSAGPIGKINGGLFLAVYRGKVAEGIDFKDNEARCVVCVGIP 831
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
F DP + +K +Y D T L G +WY+ QA RA+NQA+GR +RH
Sbjct: 832 FPVRKDPVIDMKFKYNDAN----------TAKGLLRGTEWYSIQAFRALNQALGRCLRHI 881
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQ 703
+D+GA+I DERF P K+ + W++
Sbjct: 882 NDWGAVILVDERFLLPEYKANLPKWVK 908
>gi|222642047|gb|EEE70179.1| hypothetical protein OsJ_30256 [Oryza sativa Japonica Group]
Length = 1456
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 254/779 (32%), Positives = 384/779 (49%), Gaps = 106/779 (13%)
Query: 25 MEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATLAWRK----------SLGSFSTL 69
M +VI +L Q + +ALLESPTGTGK+L LLC+ LAW++ + F
Sbjct: 1 MGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLRAPPAAAPDPFLHG 60
Query: 70 GSQVNNQISGSQS-SVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGS 128
G V + + V + +PTI Y +RTH+Q+ QV++E + ++YR +M IL S
Sbjct: 61 GGFVPDDTQKQATPGVPEKATRKKNVPTIYYATRTHAQITQVVREYRKTSYRVRMAILAS 120
Query: 129 REQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHL--GD--EPID 184
R+ C+++ V + + C+ L + + C + + A + +P L G E D
Sbjct: 121 RKHYCVNKNVCM--SGNIDELCKSLLDD-SAQGCPEY-KNAQKLSRHPSLQIGGCYEVHD 176
Query: 185 IEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH 244
IEDLV +GR CPYF + + + +VF PYNYLI P R+ + ++ + SI++ DEAH
Sbjct: 177 IEDLVRVGRKVKGCPYFAAQTMAEAAQLVFCPYNYLISPIVRRAMDIDIRGSIIVLDEAH 236
Query: 245 NLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKL 304
N+E I DA SFD+ + ++ + + G +DE + + L ++ L
Sbjct: 237 NIEDIARDAGSFDV----------DEESLLFLRQELEGLVTDEAV-AKIYEPLHEVIQGL 285
Query: 305 EKRIAEVPINSKELGFTKPGPYIY--ELLADLNITQETAYKLIDIVEVAAELLQ-----E 357
I E N ++ F P + E + +L T + E A + ++ E
Sbjct: 286 NGWIDEQGNNLQKNEFEHPASFWTGEEAMKELKYAGITPVNFPVLQECATKAIKAASDAE 345
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK------GK 411
+ + +A +ES+ + L F + G + Y R A A+V+
Sbjct: 346 SEGVHLSGGSAMTLESLFSSLSYFFAENGRHSNDYQLALQRFAKREGANVMSYDLIICNS 405
Query: 412 ASRTLSW------WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN 465
+ + W WC NP + ++ + L + S+ILTSGTLSPM SFA EL + F +E
Sbjct: 406 VTSFIGWKCVMSLWCLNPAVVFRDIADLTL-SVILTSGTLSPMGSFASELGVQFEACMEA 464
Query: 466 PHVITS-KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
PHVI + Q++A ++ GP+G LN+SYR + ++ ELG T+ I R+VP G L+FFP
Sbjct: 465 PHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQDELGATLEEICRVVPGGALVFFP 524
Query: 525 SYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS--LFPLAIEDYMAKL---- 578
SY L+++ W T W R+ K VEPR S+ L P+ Y A L
Sbjct: 525 SYNLLEKLQRRWSQTGQ------WARLEAQKHVCVEPRGSTEELEPVLKGYYNAILGKAP 578
Query: 579 ---------------------KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV---VITG 614
++++ GA F AVCRGKVSEG+DF+D R V V +
Sbjct: 579 PKKGRGGAKQIVKNRVTKDSSQESAKGGAAFLAVCRGKVSEGIDFSDDKARVVVSFVFSS 638
Query: 615 MPFAT---MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
F + D +V+LK+ Y D YK +K LSG +WY QA RA+NQA GR
Sbjct: 639 YVFYAPERINDVQVKLKKRYND--------SYKSSK-DLLSGNEWYCHQAFRALNQAAGR 689
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR--EERI 728
IRH+ DYG II DER+ IS W++ I+ F + + LTRFF+ EE+I
Sbjct: 690 CIRHKFDYGGIILIDERYQEERNIVYISKWLRNSIRNCGTFQETMDGLTRFFQNAEEQI 748
>gi|169806602|ref|XP_001828045.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|161779173|gb|EDQ31197.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 670
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 245/740 (33%), Positives = 376/740 (50%), Gaps = 84/740 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M YKI G V FP++ Y Q+ ME +++S + AL+ESPTGTGK+L +LCA + +
Sbjct: 1 MERYKIGGYTVWFPYKPYPAQIQTMETMLKSFGSSKCALIESPTGTGKSLAILCAVMGYL 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ + + + +++ VN++Q G+ PTI SRTH Q+ Q+I +L+ + Y
Sbjct: 61 EKKDLNDIIDPKKRRIDNDTENFVNNNQIGN---PTIYICSRTHKQIDQLINQLRKTKYN 117
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
P++ ILGSR+Q CI+ + L R N AC+ L +RC + S V+ K ++
Sbjct: 118 PRISILGSRKQYCINSQ--LRRALDINTACKDLID---TKRCIYKSGVSRLKKQISNI-- 170
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
DIE++ N G+ G CPYF +RE+ +I+FAPYNY+IDP RK L +E KN+I+I
Sbjct: 171 --YDIEEIRNSGKKCGGCPYFASREIANEAEIIFAPYNYIIDPHIRKSLDIELKNAIVII 228
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHN+E C SF+L+S L +SE +SS R+ + ++ D F L
Sbjct: 229 DEAHNIEDTCRSVGSFELNSRTLDIWMSEL-----LSSARKAILLEGSIEND-FLQLSEF 282
Query: 301 LLKLEKRIAEVPINSKELGF-TKPGPYIYELLADLNITQ------ETAYKLIDIVEVAAE 353
+ K + +I S++ + G Y+ E L L ITQ ++ K I E A
Sbjct: 283 IKKFKTKIDIQFEKSRDFHYKVFKGTYMIEQLKILGITQVSLNLFQSNIKNIRDNEKAKA 342
Query: 354 LLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY-YRVHVREADANAADVLKGKA 412
LL ++ Q +ES+ +LK I ++ + ++ V++
Sbjct: 343 LLSQNLQQG--------LESLDFVLKNILTNRAKDEYIFCFKQFVKD------------K 382
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
S +W +P I R EV SIIL SGTL+P +F ELK+NF ++ PH++ S
Sbjct: 383 SFAYCFWLLDPSIIFAGL-RNEVRSIILLSGTLTPFATFTSELKVNFENKLIAPHILVSN 441
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP--DGLLIFFPSYYLMD 530
Q++ + G L +Y ++ EY ++ I NIA + G L+F PSY +
Sbjct: 442 QVFVANIKKGHLKTELTGTYSIANTPEYLSQIATIIENIATQIHIYGGTLVFVPSYVFLK 501
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSL--FPLAIEDYMAKLKDTSTSGAV 587
+ H K K PV VEP +S F + +Y KLKD S+ A+
Sbjct: 502 KL--------HN----------KMKLPVIVEPDTNSTEKFDATLIEYENKLKD-SSHPAI 542
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
FF V RGK SEG++F D RAV+ G+P+ ++ DP++ K+EY +
Sbjct: 543 FFCVYRGKASEGINFQDKYARAVIGIGIPYPSINDPQITTKKEY-------------NST 589
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+ G +WY QA RAVNQA+GR++RH D+GA+ + R+ P + Q+ WI I+
Sbjct: 590 IKNFGGSEWYMIQAIRAVNQALGRIVRHPGDWGAVFLLETRYQTPQIRKQLPQWITRSIK 649
Query: 708 CYSKFGDVVYTLTRFFREER 727
Y F D +F E++
Sbjct: 650 DYDTFDDCKNDFIKFLSEKK 669
>gi|328770876|gb|EGF80917.1| hypothetical protein BATDEDRAFT_1044 [Batrachochytrium
dendrobatidis JAM81]
Length = 639
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 234/693 (33%), Positives = 362/693 (52%), Gaps = 69/693 (9%)
Query: 28 VIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSS 87
+I++L+ NALLESPTGTGKTL +L A LAWR++ + N ++ S
Sbjct: 1 IIKALKESENALLESPTGTGKTLTILTAVLAWREA--------ERTNITNIRTEHFNEKS 52
Query: 88 QSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRPKMVILGSREQLCIHREVSLLRGSAQ 146
++ + +PTI SRT Q++Q+++EL+ S YRP++ ILGSRE CI+ + L R + +
Sbjct: 53 KALNESIPTIFIASRTQKQIQQIVRELREKSTYRPRISILGSREHYCINPQ--LKRSTNK 110
Query: 147 NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP---IDIEDLVNIGRTFGPCPYFMT 203
C L + + C + +R + G+E DIEDLV +G+ CPY+
Sbjct: 111 GEECTSLIETDS---CGYFNRTRQLQGHAKIQGEERNAIWDIEDLVTVGKRTRGCPYYAA 167
Query: 204 RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLL 263
+ L +T +++FAPYNY+IDP R G+ +NSILI DEAHN+E C D+ S D + +
Sbjct: 168 KALAETAEVIFAPYNYIIDPHVRASSGISLENSILIIDEAHNIESSCMDSGSADFTEQEM 227
Query: 264 TACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAE---VPINSKELGF 320
+ + + ++G DE + L + L + + + SK L
Sbjct: 228 IETSRDLEGIV-----KQGHHVDEY---NTLIHLIKMFLDWRCKFEDSFTIHEFSKSLKI 279
Query: 321 TKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKI 380
+ GP I +LL D+ I + I ++ A +QE + K R L++
Sbjct: 280 WQ-GPEISQLLGDMGILPGS----IPMITQAYATIQETMGSSDKFKLLKREYPSQRSLQL 334
Query: 381 IFRDK--GTAHSAYYRVHVREADA--NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
I + + + H+ + N D L T S+WC NP + + +
Sbjct: 335 IGGKQIYFLHYEIMFITHLLFGNTLTNILDSLPW--VYTFSFWCMNPAVIFKHIESM-TK 391
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
SIILTSGT+SP+ SF++EL + F +E PH+I Q+ G +P G + L Y++ +
Sbjct: 392 SIILTSGTMSPISSFSRELGVKFAHTLEAPHIIKDDQLCIGSLPSGANNMPLVGVYKSFE 451
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
+ +Y+ +LG +I +A ++P GLL+F PSY T + +R+ K K
Sbjct: 452 TFDYQDQLGLSIARLANLIPQGLLVFLPSYM----------------YTGLEQRLGKTKY 495
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTST--SGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
EPR ++ +E+ MAK S+ SGA+ F V RGK+SEG+DF+DH R V+ G
Sbjct: 496 IFTEPRANA--KKELENLMAKYDSISSTESGAILFCVYRGKMSEGIDFSDHRARGVICVG 553
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+PF + D KV KR+Y +A S+G L+G +WY+ QA RA+NQA+GR IR
Sbjct: 554 LPFPNIKDIKVLQKRDYNTQRASSRG---------LLTGSEWYSMQAYRALNQALGRCIR 604
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
HR+D+GAII DERF+ S +S W++ I+
Sbjct: 605 HRNDWGAIILLDERFSQSRCTSNLSKWMRTKIR 637
>gi|302768379|ref|XP_002967609.1| hypothetical protein SELMODRAFT_408754 [Selaginella moellendorffii]
gi|300164347|gb|EFJ30956.1| hypothetical protein SELMODRAFT_408754 [Selaginella moellendorffii]
Length = 1004
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 246/773 (31%), Positives = 375/773 (48%), Gaps = 96/773 (12%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-------NKCNALLESPTGTGKTLCLLCA 55
Y+I G+ VEFP+ AY QL +M KVI +L+ CNALLESPTG+GK+L LLCA
Sbjct: 7 VYQICGVKVEFPYRAYGSQLAFMGKVITTLERAFRDPDGHCNALLESPTGSGKSLSLLCA 66
Query: 56 TLAWRK-------SLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLR 108
LAW++ S+G + G + S + + Q+ +K PTI + +RTHSQ+
Sbjct: 67 ALAWQQHRMVAAASIGPATQFGGGFIPEGPASGAE-DKHQAKKNKPPTIFFATRTHSQIS 125
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
Q++ ELK +NYR M IL +R+ C ++ V + + ++ C+ L K ++ C V
Sbjct: 126 QIVHELKKTNYRVPMAILAARKHYCTNQHVC--KKANLDDECKVLLKD-PHKACPQFKNV 182
Query: 169 ADYMKNNPHL----GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
+ +K++P L E DIEDLV + R+ C YF +R + IVF PY+Y++ P
Sbjct: 183 -NKLKHHPALRKGGCHETHDIEDLVTLARSVRGCAYFTSRIMAADAQIVFCPYSYILSPI 241
Query: 225 FRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS 284
FRK + V+ + +I+IFDEAHN+E + +A S DL + +L A S + ++ +
Sbjct: 242 FRKAMDVDIRGAIIIFDEAHNIEDMSREAGSVDLDTSILEA--SSEELRNELEELSSSED 299
Query: 285 SDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK-PGPYIYELLADLNITQETAYK 343
S + P F +++ LL+ + ++ + + ++ GP E L I+ E+
Sbjct: 300 SHDLYRP-LFDMVQELLIWIRQQDENLQRKEVDHYYSNWTGPKGLEQLQAAGISSESFSI 358
Query: 344 LIDIVEVAAELLQEDKLQNKKSTTAC--RIESISNILKIIFRDKGTAHSAYYRVHVREAD 401
+D AA + + + C +E + LK + H V
Sbjct: 359 QLDCAVKAAGAASDPDPEKPHLSGRCASAMEGLFCALKFMLSKPEYIHDYQIVVQRVLNK 418
Query: 402 ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
D K LS+WC NPG+ E + + S++LTSGTLSPM SFA EL +F +
Sbjct: 419 VEGTDEWLHK----LSFWCLNPGVVFNEIATI-CKSVVLTSGTLSPMGSFASELGTSFEM 473
Query: 462 RVENPHVIT-SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
+E PH+I + Q+ V GP LN+SY+ +++ ++ LG + I IVPDG L
Sbjct: 474 VMEAPHIIDLNSQLLVSAVSFGPGNVPLNASYQYANTVAFQDALGTALEQICNIVPDGAL 533
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS-LFPLAIEDYMAKLK 579
+FFPSY L+ + WK T W+RI K VEP+ S+ F ++D+ +K
Sbjct: 534 VFFPSYKLLQRVCNRWKTTGQ------WKRILDIKSVFVEPQGSTGKFEDILKDFYKVIK 587
Query: 580 DTST--------------------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
+ +GA F AVCRGK V+ G+PF
Sbjct: 588 GENVEPSRRKRILTPKNFTSAGGQTGAAFLAVCRGK---------------VVVGIPFPN 632
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ D +V +K+ Y D Q +T S L G+ W GR IRHR DY
Sbjct: 633 LNDVQVAMKKNYNDNQ---------KTLKSLLGGDQW----------NVTGRCIRHRGDY 673
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGST 732
GAI+ DERF + +S W++ I + F + + L FF + GST
Sbjct: 674 GAIVLLDERFNKANYTGYMSKWLRKSIMRPASFQEALRDLQAFFSKFENTGST 726
>gi|218202591|gb|EEC85018.1| hypothetical protein OsI_32311 [Oryza sativa Indica Group]
Length = 1265
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 251/783 (32%), Positives = 383/783 (48%), Gaps = 110/783 (14%)
Query: 25 MEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATLAWRK--------------SLGS 65
M +VI +L Q + +ALLESPTGTGK+L LLC+ LAW++ +
Sbjct: 1 MGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLRAPPAAAAAAAPDP 60
Query: 66 FSTLGSQVNNQISGSQS-SVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMV 124
F G V + + V + +PTI Y +RTH+Q+ QV++E + ++YR +M
Sbjct: 61 FLHGGGFVPDDTQKQATPGVPEKATRKKNVPTIYYATRTHAQITQVVREYRKTSYRVRMA 120
Query: 125 ILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLG----D 180
IL SR+ C+++ V + + C+ L + + C + + A + +P L
Sbjct: 121 ILASRKHYCVNKNVCM--SGNIDELCKSLLDD-SAQGCPEY-KNAQKLSRHPSLQIGGCY 176
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
E DIEDL+ +GR CPYF + + + +VF PYNYLI P R+ + ++ + SI++
Sbjct: 177 EVHDIEDLIRVGRKVKGCPYFAAQTMAEAAQLVFCPYNYLISPIVRRAMDIDIRGSIIVL 236
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHN+E I DA SFD+ + ++ + + G +DE + + L +
Sbjct: 237 DEAHNIEDIARDAGSFDV----------DEESLLFLRQELEGLVTDEAV-AKIYEPLHEV 285
Query: 301 LLKLEKRIAEVPINSKELGFTKPGPYIY--ELLADLNITQETAYKLIDIVEVAAELLQ-- 356
+ L I E N ++ F P + E + +L T + E A + ++
Sbjct: 286 IQGLNGWIDEQGNNLQKNEFEHPASFWTGEEAMKELKYAGITPVNFPVLQECATKAIKAA 345
Query: 357 ---EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK---- 409
E + + +A +ES+ + L F + G + Y R A A+++
Sbjct: 346 SDAESEGVHLSGGSAMTLESLFSSLSYFFAENGRHSNDYQLALQRFAKCEGANMMSYDLI 405
Query: 410 --GKASRTLSW------WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
+ + W WC NP + ++ + L + S+ILTSGTLSPM SFA EL + F
Sbjct: 406 ICNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTL-SVILTSGTLSPMGSFASELGVQFEA 464
Query: 462 RVENPHVITS-KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
+E PHVI + Q++A ++ GP+G LN+SYR + ++ ELG T+ I R+VP G L
Sbjct: 465 CMEAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQDELGATLEEICRVVPGGAL 524
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS--LFPLAIEDYMAKL 578
+FFPSY L+++ W T W R+ K VEPR S+ L P+ Y A L
Sbjct: 525 VFFPSYNLLEKLQRRWYQTGQ------WARLEAQKHVCVEPRGSTEELEPVLKGYYNAIL 578
Query: 579 -------------------------KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV--- 610
++++ GA F AVCRGKVSEG+DF+D R V
Sbjct: 579 GKVPPKKGRGGAKQIVKNRVTKDSSQESAKGGAAFLAVCRGKVSEGIDFSDDKARVVVSF 638
Query: 611 VITGMPFAT---MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
V + F + D +V+LK+ Y D YK +K LSG +WY QA RA+NQ
Sbjct: 639 VFSSYVFYAPERINDVQVKLKKRYND--------SYKSSK-DLLSGNEWYCHQAFRALNQ 689
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR--E 725
A GR IRH+ DYG II DER+ IS W++ I+ F + + LTRFF+ E
Sbjct: 690 AAGRCIRHKFDYGGIILIDERYQEERNIVYISKWLRNSIRNCGTFQETMDGLTRFFQNAE 749
Query: 726 ERI 728
E+I
Sbjct: 750 EQI 752
>gi|224061865|ref|XP_002300637.1| predicted protein [Populus trichocarpa]
gi|222842363|gb|EEE79910.1| predicted protein [Populus trichocarpa]
Length = 1183
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 247/804 (30%), Positives = 371/804 (46%), Gaps = 138/804 (17%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATL 57
+Y I GI VEFP++ Y QL +M +VI +L C+ALLESPTGTGK+L LLC+TL
Sbjct: 17 SYHIGGIQVEFPYKPYGTQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
Query: 58 AWRKSL--------------------------GSFSTLGSQVNNQISGSQSSVNSSQSGD 91
AW+++ G F + + + + + S
Sbjct: 77 AWQQNYKLKNQYANLTHSTPNPEAITDPLAHGGGFVPESTPSSTEPTAAVELAQKVASNK 136
Query: 92 SK--LPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNA 149
K +P I Y SRTHSQ+ QV+ E + + YR M +L SR+ C + V+ R +
Sbjct: 137 KKKAVPKIYYASRTHSQISQVVSEFRKTTYRVPMAVLASRKHYCTNVHVN--RKENIDEE 194
Query: 150 CRFLCKKGTNRRCNHHSRVADYMKNNPHLGD----EPIDIEDLVNIGRTFGPCPYFMTRE 205
C+ L K C + A+ ++ +P L E DIEDLV +G+ C Y+ R
Sbjct: 195 CKLLLKD-KEAGCLQF-KNANKVRGHPSLQKGGCHEVHDIEDLVKVGQVVKGCSYYAARS 252
Query: 206 LQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTA 265
+ +VF PYNY+I+P R + V+ +IL+ DEAHN+E I DA S D+ +L
Sbjct: 253 MADDAQLVFCPYNYIINPVIRGAMEVDIIGAILVLDEAHNIEDIARDAGSVDVEEDVLQK 312
Query: 266 CISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS-KELGFTKPG 324
+E + + D + + + + LL +E+R ++ + G
Sbjct: 313 LQTELQELCPV---------DPMIYQPLYEMAQDLLSWIERRKNKLEKREFQHYCSCWAG 363
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK--KSTTACRIESISNILKIIF 382
+ NI+Q+ L+D + A + + + + + +E + + L F
Sbjct: 364 DKALREFQEANISQQCFPILLDCAKQAIKAATDTEAEGSHLSGMSVVLLEGLFSSLTYFF 423
Query: 383 RDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSII 439
G S + R +V+ A D + TLS WC NP + ++ + L + S+I
Sbjct: 424 SRNGCQVSDFQLALRRYVKRDGKKAGD-----WTCTLSLWCLNPAVVFKDIADLSL-SVI 477
Query: 440 LTSGTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
LTSGTLSPM+SF+ EL + F +E PHV+ Q+ ++ P Y LN+SY+ D
Sbjct: 478 LTSGTLSPMNSFSSELGVQFGTCLEAPHVVDVESQVCVSVISTSPDNYPLNASYKTADCY 537
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
++ LG ++ I +IVP G L+FFPSY LM++ W+ T W R+ K
Sbjct: 538 TFQDALGKSLEEICKIVPAGSLVFFPSYKLMEKLSNRWRETGQ------WSRLNARKPLF 591
Query: 559 VEPRQSSLFPLAIEDYMAKLK-----------------------------------DTST 583
VEPR S ED+ + LK ++
Sbjct: 592 VEPRGGSQ-----EDFDSILKGYYDCIRRDKRPALGRKRKVKKVDANHLDGTESTDNSEK 646
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA F AVCRGKVSEG+DF+D R ++Y D Y
Sbjct: 647 GGAAFLAVCRGKVSEGIDFSDDYAR--------------------KKYND--------AY 678
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
K +K + L G +WY QQA RA+NQAVGR IRH+ DYG+II DER+ + IS W++
Sbjct: 679 KTSK-NLLGGNEWYCQQAFRALNQAVGRCIRHKFDYGSIILLDERYKEERNRVYISKWLR 737
Query: 704 PHIQCYSKFGDVVYTLTRFFREER 727
IQ ++ F + L FFR +
Sbjct: 738 KSIQQHNNFDMSLEVLRSFFRNAK 761
>gi|91080379|ref|XP_975049.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 676
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 194/532 (36%), Positives = 286/532 (53%), Gaps = 44/532 (8%)
Query: 216 PYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID 275
P N+ P+ + +E ++L FDE HN+E IC D+AS + S + CI E
Sbjct: 10 PVNFPCTPYDIQVNYMEKIANMLYFDEGHNIEKICEDSASIQIKSADIALCIDE------ 63
Query: 276 ISSTRRGQSSDETLN-----------PDNFAILRALLLKLEKRIAEVPINSKEL-GFTKP 323
++ R S + L+ PD IL+ + L EK + E+ + + G
Sbjct: 64 VTGVMRALSDETILDFNDKEVPKDFTPDELCILKEIFLNFEKVLDEIEVKAGAPEGTYFE 123
Query: 324 GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR 383
G YI+E+ I ++ +++ + L + + ++ S++L I F
Sbjct: 124 GSYIFEMFNKAGINDGNYNSVLSVMDKIIQFLASGN-EGPFARKGVGLQLFSDLLTIAFS 182
Query: 384 DKGTAHSAY----YRVH--VREADANAADVLKGKA-----SRTLSWWCFNPGIAMQEFSR 432
Y+VH V E AAD KA SR LS+WCF+PG M
Sbjct: 183 SVSPQFKEKIKRCYKVHIAVEEGKKKAADDWLSKATLKTRSRVLSYWCFSPGFGMNMLLD 242
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
V +ILTSGTL+P+ EL+LN +R+ENPH++ Q+ I+ GP G LN +Y
Sbjct: 243 QGVHCVILTSGTLAPLKPLISELELNVGVRIENPHIVKGDQVCVKILTKGPDGEPLNCNY 302
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
+NRD+ Y LG ++N+ RI+P G+LIFFPSY +M +C W+ + IW+ I
Sbjct: 303 QNRDNPNYLMSLGQVVLNLIRIIPHGVLIFFPSYPIMQKCQQYWQESG------IWDGIN 356
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K K VEP+ + F A+ +Y +K+KD + GA+F VCRGKVSEGLDFAD GRAV I
Sbjct: 357 KIKAIFVEPKDKNSFTFAMSEYYSKVKDPNYKGAIFMGVCRGKVSEGLDFADSNGRAVFI 416
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
G+P+ + DPK+ LK+ YLD+ ++ EY L G+DWY+ +A+RA+NQA+GRV
Sbjct: 417 IGLPYPPLKDPKIILKKRYLDV-CNAKDKEY-------LKGDDWYSLEATRAINQAIGRV 468
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IRH++DYGAII D RF +P + +SLW++ HI+ FG + L FF+
Sbjct: 469 IRHKNDYGAIILLDSRFTNPRIQGNLSLWLKKHIKIMQNFGALTRDLRLFFQ 520
>gi|449455726|ref|XP_004145602.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
homolog [Cucumis sativus]
Length = 1042
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 267/819 (32%), Positives = 395/819 (48%), Gaps = 121/819 (14%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATL 57
Y+I G+ VEFPF Y QL +M++VI +L + C+ALLESPTGTGK+L LLC++L
Sbjct: 24 VYRIGGVQVEFPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSL 83
Query: 58 AWRKSL--------------------------GSF---------STLGSQVNNQISGSQS 82
AW+K+ G F + GS V+ S
Sbjct: 84 AWQKNFKIKNQDANFCHTRPAPEAATNPLGFGGGFIPEVQPSSKNIKGSLVSTDTESSLP 143
Query: 83 SVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLR 142
N+ PTI Y+SRTHSQ+ QVI+E + + YR M +L SR+ LC + V R
Sbjct: 144 GPNNKIRKKKTAPTIYYSSRTHSQISQVIREYRKTAYRVPMAVLASRKHLCTNPRV---R 200
Query: 143 GSAQ-NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD----EPIDIEDLVNIGRTFGP 197
G + C+ L K + C+ + + +K +P L E DI+DLV G
Sbjct: 201 GKDNLDEKCKLLLKD-QDAGCSEF-KNGNKVKCHPTLQKGGRHEVHDIQDLVKTGEAVKG 258
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
C Y+ R + +VF PY+Y+I+P R+ +GV+ K++I+IFDEAHN+E I S D
Sbjct: 259 CSYYAARSMADDAQLVFCPYSYIINPVIRRAIGVDVKDAIVIFDEAHNIEDIARHGGSVD 318
Query: 258 LSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE 317
+ L E + I+ + T + L++ + + + + E
Sbjct: 319 IEEDTLNKLQMELEQLCFINYLVYQPLYEMTQD------LKSWIDRRKTTLQEREFQHYV 372
Query: 318 LGFTKPGPYIYELLADLNITQETAYKLIDI----VEVAAELLQEDKLQNKKSTTACRIES 373
+T G + L + NITQ+ L++ + A+ + +D + + +E
Sbjct: 373 TCWT--GNHAQRELQEANITQQCFPILLECATKATKAASYTVSDDA--HLSGLSVLTLEG 428
Query: 374 ISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL 433
+ + L F G H + Y++ ++ + K + TLS WC NP + ++ L
Sbjct: 429 LFSSLTYFFSRNG-CHMSDYQLALQRYTKRDPEKACAKWTVTLSLWCLNPAVVFRDIGDL 487
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSSY 492
+ S+ILTSGTLSP++SF+ EL + F +E PHVI Q+W I+ +GP GY LN
Sbjct: 488 SL-SVILTSGTLSPLNSFSSELGVRFGTSLEAPHVIDVESQVWPAIISIGP-GY-LNLYV 544
Query: 493 RNRD---SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
R +I K LG ++ I I P G L+FFPSY LM++ W T W
Sbjct: 545 RFSCLILAIFLKDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLRNRWSETGQ------WS 598
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLK---DT------------------------S 582
R+ K VEP A ED+ + LK DT +
Sbjct: 599 RLNARKSLFVEPCGG-----AQEDFDSILKGYYDTIRLGDNFAVGKKVKPDESYVFGCEN 653
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGE 642
GA AV RGKVSEG+DF+D R V+I G+PF + +V LK+++ D +
Sbjct: 654 PKGAALLAVFRGKVSEGIDFSDDNARVVIIVGIPFPDINGIQVALKKKFND--------K 705
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
YK +K + LSG +WY QQA RA+NQA GR IRH+ DYGAI+ DERF ++ IS W+
Sbjct: 706 YKMSK-NLLSGNEWYCQQAFRALNQAAGRCIRHKFDYGAIVLLDERFQEERNRTYISKWL 764
Query: 703 QPHIQCYSKFGDVVYTLTRFFR--EERICGSTNLKLIKT 739
+ I+ + F + L FF +ERI T +L K+
Sbjct: 765 RKSIKQFDNFEQSMEELKSFFSHIKERISNKTESELPKS 803
>gi|345325239|ref|XP_001508332.2| PREDICTED: regulator of telomere elongation helicase 1
[Ornithorhynchus anatinus]
Length = 1585
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/541 (38%), Positives = 302/541 (55%), Gaps = 55/541 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC TLAWR
Sbjct: 1 MPKITLNGVTVDFPFQPYKCQEDYMAKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWR 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQS--------GDS-----KLPTILYTSRTHSQL 107
+ + ++ +++G + N S GD+ +P I+Y SRTHSQL
Sbjct: 61 EHFRD-TISARKIAERMNGEELFPNRPMSSWGTAATDGDTTAYYTDVPKIIYASRTHSQL 119
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHS 166
QVI EL+++ YRPK+ +LGSREQLCI+ EV + Q + CR KK C ++
Sbjct: 120 TQVIGELRSTTYRPKVCVLGSREQLCINPEVKKQESNHMQIHMCR---KKVATHSCYFYN 176
Query: 167 RVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V + L +DIEDLV G CPY+ +R L++ DI+F PYNYL+D R
Sbjct: 177 NVEEKSTEK-ELITSILDIEDLVKSGSKHKVCPYYFSRSLKQQADIIFMPYNYLLDSKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLS-----SGL--LTACISEA-----KNCI 274
+ ++ K +++IFDEAHN+E +C ++ASFDL+ SGL + + E +N I
Sbjct: 236 RAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPYDLASGLDVINQVLEEQAKVLQQNEI 295
Query: 275 DISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
+S + ++ A ++++LL+LE I + + G TKPG YI++L A
Sbjct: 296 QAEFNMEFANSGLNMELEDIAKIKSILLQLESAIDAIELPGDSSGVTKPGSYIFDLFAKA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK--------- 385
I +T L++ +E +++Q + T ++ + +I++I+F
Sbjct: 356 QINFQTKCSLLESLE---QIIQFLAGRAGIFTNTAGLQKLVDIIQIVFSIDPPEDAASFM 412
Query: 386 -GTAHSAYYRVHV----------READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE 434
G S YY+VH+ + DA +A V K K + LS+WCF+PG +M E R
Sbjct: 413 VGQKASQYYKVHIHLDTSNRKKTQRTDAWSAPVTK-KQGKVLSYWCFSPGYSMHELVRQG 471
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V +IILTSGTL+P+ SF E+++ FP+ +ENPHVI QIW GIVP GP G L+S+Y
Sbjct: 472 VRTIILTSGTLAPISSFTMEMQIPFPVSLENPHVIDKHQIWVGIVPKGPDGAQLSSAYDK 531
Query: 495 R 495
R
Sbjct: 532 R 532
>gi|339246019|ref|XP_003374643.1| DNA repair helicase family protein [Trichinella spiralis]
gi|316972128|gb|EFV55819.1| DNA repair helicase family protein [Trichinella spiralis]
Length = 987
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 260/844 (30%), Positives = 388/844 (45%), Gaps = 197/844 (23%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSL-----QNKC-------------NALLESPTGTG 47
I GI V FP+E Y CQL YMEKVI L +N C NA LESPTGTG
Sbjct: 5 ICGILVNFPYEPYPCQLDYMEKVITCLNQLTEENFCFAYCLLHLNIQRSNAALESPTGTG 64
Query: 48 KTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQL 107
KTLCLLCA L W +++ + +S S++ + + P ILY SRTHSQL
Sbjct: 65 KTLCLLCACLGWLETVHP----KENITPNMSMSKNLSKNEKQLQPARPQILYASRTHSQL 120
Query: 108 RQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHH 165
QVI+EL + Y ++ ILGSR+QLCI EV + S +N+ CR K +R C ++
Sbjct: 121 SQVIKELNKTTYAGIRVCILGSRDQLCIDEEVKAEKQSIIKNHICR---AKRLSRSCRYY 177
Query: 166 SRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
+ + + + GD + DIEDL++ G+ CP++ RE + D++ PYNY++DP
Sbjct: 178 NELKNATATSFIFGDNKVMDIEDLLSSGKLNNFCPFYKAREGVEEADLILMPYNYVLDP- 236
Query: 225 FRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNC----IDISSTR 280
E +C ++ASF +S A + EA++ ID T
Sbjct: 237 ---------------------TEKVCEESASFSFTSKDFAAALREAQDALRLLIDDQETI 275
Query: 281 RGQ--SSDETLNPDNFAILRA---------------LLLKLEKRIAEVPINSK-----EL 318
R Q ++E D I A LL K+E+ E + E
Sbjct: 276 RKQRDETEELFGSDALQIKLATLPDVDMNVLSNQIVLLEKVEQEFCEAVTAATCEGNLEE 335
Query: 319 GFTKPGPYIYELLADLNI-------------------TQETAYKLIDIVEVA-------- 351
G T PG ++ ++L I T + + L+ ++ A
Sbjct: 336 GITLPGHFLSDILLKAGIRPDMCEPISVLADHLSSYLTVKENFPLLTVIAAANNSPWVSR 395
Query: 352 -------AELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANA 404
+ L+ +N T+ C I ++ K+ + ++ H
Sbjct: 396 GLAFSKFSSLVNAVYYRNISQTSKCEIMHDTDDFKVYICSGQVSKNSDSESH-------- 447
Query: 405 ADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL------- 457
++ K S ++++WCF+ GI M + ++ S+I+TSGTLSP+DSF E+++
Sbjct: 448 SNCSKIPGSFSINYWCFSAGIGMSLLLKCQLRSVIVTSGTLSPLDSFVNEMRMCAASVLP 507
Query: 458 -----NFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
FP+R+EN H++ S+Q I P GP G L++ + NR++ +Y LGN+I N
Sbjct: 508 VYFERPFPIRLENCHIVKSEQYLFCICPSGPDGERLHADFSNRNNKKYLNSLGNSINN-- 565
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIE 572
+I +R+ + KK +EP+ F ++
Sbjct: 566 ---------------------------------SIMDRVKRFKKVFIEPKTKCEFQTVMD 592
Query: 573 DYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYL 632
+Y +L + S + G +SEG DF+D + RAVVI G+PF DP VRLKR+YL
Sbjct: 593 EY-KRLAEASGTEL-------GVLSEGYDFSDCSARAVVIAGIPFPPAFDPHVRLKRDYL 644
Query: 633 DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA-- 690
+ E K+ KL L G WY A R VNQA+GRVIRHR+D+GAII D RF+
Sbjct: 645 N--------EQKQKKLLSLDGSAWYVLDAVRVVNQAIGRVIRHRNDFGAIILADNRFSSW 696
Query: 691 ----HPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKT--EVSGD 744
+P+ W++ Y FGDVV L FF++ + C +L T E S D
Sbjct: 697 PNYYYPN-------WLRQSAMAYKNFGDVVKALANFFKQHQ-CSRRSLTQASTHAEASSD 748
Query: 745 VREL 748
+L
Sbjct: 749 NSKL 752
>gi|8886948|gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]
Length = 1273
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 249/830 (30%), Positives = 373/830 (44%), Gaps = 181/830 (21%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATLA 58
Y+I G+ VEFP++ Y QL +M +VI +L C+ALLESPTGTGK+L LLC+ LA
Sbjct: 27 YQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVLA 86
Query: 59 WRKSLGSFSTLGSQVNN---------------------QISGSQSSVN-----SSQSGDS 92
W+++ S G+ ++ Q S + +S N ++ +
Sbjct: 87 WQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGFIPETQPSDTPASTNVEKAETATKKRT 146
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRPKMVIL-------------------------- 126
K+PTI Y SRTHSQ+ QVI+E + + YR M +L
Sbjct: 147 KIPTIYYASRTHSQITQVIREYRKTGYRVPMAVLVCLIDFALLCGLAYFMVNQDQISYLT 206
Query: 127 -------GSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHH---SRVADYMKNNP 176
SR+ C +R V L ++ CR L K N +C+ +++ + P
Sbjct: 207 GPSSLCKASRKHYCTNRHV--LGKDNVDDECRLLLKDKANIQCSEFKNVNKITSHPSLQP 264
Query: 177 HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
+E DIEDLV +G+ CPYF + + + +VF PY+Y+++P R G+ V+ K +
Sbjct: 265 RGHNEVHDIEDLVKVGKNVRGCPYFASWSMAENAQLVFCPYSYIVNPVIRAGVEVDLKGA 324
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
I+IFDEAH L + + T + N DI+ Q+ E ++ I
Sbjct: 325 IIIFDEAHMLLMLMIRPS---------TKSFTVHSNMEDIAREAELQNELEQMSVAQPMI 375
Query: 297 LRALLLKLEKRIAEVPINSKELG-------FTK-PGPYIYELLADLNITQETAYKLIDIV 348
+ L +E I+ + L F+ G L + NIT+E L++
Sbjct: 376 YQPLCEVVEGLISWIGRKKDSLAKRDFQHYFSSWTGDKALRELEESNITRECFPILLECF 435
Query: 349 EVAAELLQEDKLQNK----KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANA 404
A +E ++++ + +E + + L F G+ H Y++ ++ +
Sbjct: 436 TKAIRTSKEAEMESDMLYLSGISVLTLEELFSSLTYFFSRNGS-HILDYQLGLQRSTKRG 494
Query: 405 ADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE 464
G + T S WC NP + ++ + + + S+ILTSGTLSPM+SF+ EL + F +E
Sbjct: 495 DP--SGTWTHTFSLWCMNPAVVFKDLADISL-SVILTSGTLSPMNSFSSELGMQFGTSLE 551
Query: 465 NPHVIT-SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
PHVI + Q+WAG + GPS Y LN+SY+ D+ ++ LG ++ I IVP G L+FF
Sbjct: 552 APHVIDPNMQVWAGAISNGPSNYPLNASYKTADAYSFQDALGKSLEEICTIVPGGSLVFF 611
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKLK-- 579
PSY LM++ W+ T W R+C K VEPR + F ++ Y ++
Sbjct: 612 PSYKLMEKLCMRWRETEQ------WSRLCLKKDLFVEPRGGAQDEFDSVLKGYYDSIRGK 665
Query: 580 ---------------------DTSTSGAVFFAVCRGK-----VSEGLDFADHAGRAVVIT 613
D S GA F AVCRGK VSEG+DFAD RAV
Sbjct: 666 NKIIGRNRRAKKAGPIKTETQDDSKKGAAFLAVCRGKSMLLQVSEGIDFADDNARAV--- 722
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
A RA+NQA GR I
Sbjct: 723 -----------------------------------------------AYRALNQAAGRCI 735
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
RHR DYGAIIF DER+ ++ IS W++ I+ Y F + L FF
Sbjct: 736 RHRFDYGAIIFLDERYKEQRNRASISKWLRQSIKVYDNFEASMEGLRSFF 785
>gi|350407679|ref|XP_003488158.1| PREDICTED: Fanconi anemia group J protein-like [Bombus impatiens]
Length = 959
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 238/751 (31%), Positives = 366/751 (48%), Gaps = 84/751 (11%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS-LG 64
I GI V+ P + Y CQ+ M ++IQ + N LLESPTG+GKTL LLC LAW +G
Sbjct: 205 ISGIKVKLPVKPYSCQVAVMNQLIQGCIKQENCLLESPTGSGKTLALLCGVLAWHDHHVG 264
Query: 65 SFSTLGSQVNNQISGSQSS------------------VNSSQSGDSKLPTILYTSRTHSQ 106
+ S NN +SS + +S K+ I Y +RTH Q
Sbjct: 265 DCKSTTSHENNGEDLPESSSTKCTDYCEDYDEEEDFEDSYEKSKKIKISKIFYGTRTHKQ 324
Query: 107 LRQVIQELKTSNYR-PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHH 165
+ QV++EL+ ++Y+ KM IL SRE CI + C L ++ C +
Sbjct: 325 IEQVVRELRKTSYKHKKMTILSSREHTCIQETTK-----NKTELCNDLLDTQNHKGCPFY 379
Query: 166 SR-----VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
+ +A + D+ DIEDLV IG+ G CPYF R L + DI+F PYNY+
Sbjct: 380 NESNKKTIATFRGVKSRGLDDIWDIEDLVAIGKNEGLCPYFAARSLAEHADIIFCPYNYI 439
Query: 221 IDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTR 280
+DP R+ + ++ ++I DEAHN+E IC + AS LTA SE ++ + +
Sbjct: 440 VDPDIRESMQLDVTGHVIILDEAHNIEDICREVASVSFREDHLTAVASECESLMK----Q 495
Query: 281 RGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP---GPYIYELLADLNIT 337
R S+ +++ LK+ + +V NS L + P G + EL ++N
Sbjct: 496 RAADSEIYGTLQTYSLKLVDFLKI-TVVDKVGYNSDNL--SSPYWTGAELLELF-NMNGL 551
Query: 338 QETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISN------ILKIIFRDKGTAHSA 391
E Y + + A + ++ + ++ T ++ + + I +++F + S
Sbjct: 552 NEAMYTMF-LGACNAAIADSNRAKEERRTFQKVLQPVISPTTKKLIEQLMFTIRMITSSE 610
Query: 392 Y---YRVHVREAD------ANAADVLKGKA----SRTLSWWCFNPGIAMQEFSRLEVGSI 438
Y +R V E A L K +RTL C NPG+ +R + SI
Sbjct: 611 YMNDFRACVTETTVKDFKYATENTWLSSKVCTQRARTLKLLCMNPGVTFAPLAR-QARSI 669
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
IL SGTLSP SF EL +F + HVI +Q++A VP GP+ L ++Y++ +S
Sbjct: 670 ILASGTLSPTASFQSELGTSFAHVLNTGHVIPKEQVYAICVPQGPNEVKLRANYQSVNSW 729
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
++ ELG ++++ VP G+L FF SY +M + W + S IW +I K+
Sbjct: 730 AFQDELGAVLLDVCESVPHGILCFFSSYNVMHTQMQRWISNS------IWTKITSVKQIF 783
Query: 559 VEPRQSSLFPLAIEDYMAKLKDTS------TSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
+EPR + +Y ++ TS +GA+F AV RGKV+EG+DF D+ R V+
Sbjct: 784 IEPRYGGDLKDIMYEYRQVIEQTSGKRRGKITGALFLAVFRGKVAEGIDFKDNEARCVIT 843
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
G+P+A DP + +K Y D K L G +WY+ QA RA+NQA+GR
Sbjct: 844 VGIPYAVRKDPVIDMKLSYNDTNV----------KKGLLKGSEWYSIQAFRALNQALGRC 893
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+RH +D+GA++ DERF K + W++
Sbjct: 894 LRHINDWGAVLLVDERFLMHENKENLPKWVK 924
>gi|242003120|ref|XP_002422617.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
gi|212505418|gb|EEB09879.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
Length = 1016
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 239/752 (31%), Positives = 379/752 (50%), Gaps = 73/752 (9%)
Query: 1 MPTYKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M +RG DV FP+ YD Q YM KV+ L K +A+LESPTGTGKTLCL AW
Sbjct: 1 MSVISLRGYDVSFPYPIPYDIQKSYMNKVLTCLDEKTHAVLESPTGTGKTLCLFAPVTAW 60
Query: 60 --RKSLGSFSTLGSQVNNQISGS--QSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK 115
RK + + N +++ +S+ + G + YT+RTHSQ+ Q + E++
Sbjct: 61 AKRKKKNAVVHVTQDSNKELNSPHFESTEHQGPWGVKSKSKVWYTARTHSQIAQTVSEVR 120
Query: 116 TSNYRPKMV-ILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMK 173
+ V ++G+R+QLCI+ V + S + C+ L K +++C ++++++ Y K
Sbjct: 121 KCDIEGLHVRVMGARDQLCINELVLEEKDSYIKTVKCKELVK---SKKCKYYTKLS-YEK 176
Query: 174 NNPHL--GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ E +DIEDLV+IG++ G CPYF+ + +T DI+ PYNY+ID R+ G+
Sbjct: 177 DFKRFYQSGEVLDIEDLVSIGKSCGICPYFLAKRASETADILLLPYNYIIDRESRESNGL 236
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNC-IDISSTRRGQSSDETLN 290
+ +N ++IFDE HN+ C ++ F +S + I ++ + +S DE ++
Sbjct: 237 QLQNDVIIFDEGHNVPSTCEESYEFSFTSLDVAIGIKNIQDVMLSLSKLTEDLIEDEEID 296
Query: 291 PD----NFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLID 346
N ++ +L KLE ++E+ +++ L P +Y L+ + LID
Sbjct: 297 VSKHVSNSMMMVEMLQKLESALSEMNASNELL----PVSELYNFLS--------SAVLID 344
Query: 347 IVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAAD 406
+ + D K S T +E+ + + K++ S Y VR D + D
Sbjct: 345 GISS----FKSD--SEKLSLTGSTLETFNLLEKMM--------SVMYGSTVRSFDKSIVD 390
Query: 407 -----VLKGKASR----TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
V+ R S +CFNP ++ L SII+TSGTLSP+ +F EL L
Sbjct: 391 RSFKCVITTDPERHFAKKFSLYCFNPSFGIKSLLALGSQSIIITSGTLSPLRTFIYELGL 450
Query: 458 NFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD 517
P+ +EN H+ Q+ I+ G + ++ +Y+NR+ +Y LG ++ N+ +PD
Sbjct: 451 PKPVTLENKHIAKKCQVPFVILGTGVNNVKMDGAYKNRNDPKYVSSLGMSLTNLIASIPD 510
Query: 518 GLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAK 577
G+L+ F SY +M W+ IW R+ K+ VEPR + F +E+Y
Sbjct: 511 GILLLFSSYTMMQSLKESWEKD-----LGIWTRLNSLKRVFVEPRNKNEFINCMENYRRA 565
Query: 578 LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
+ S +GA+ V RGK+SEG+DF D R V I G+PF + D +V K++Y ++
Sbjct: 566 I--DSGNGAILMGVLRGKISEGMDFKDQYCRGVFIIGVPFPPIQDLRVIGKQKY----SE 619
Query: 638 SQGGEYKETKLSFLSGEDWYNQ-----QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHP 692
S ++TK + E YNQ +A +A NQA+GRVIRH DYG II D RFA P
Sbjct: 620 SLMIYNEKTK----TEEKLYNQPYLSIEAMKATNQAIGRVIRHGKDYGVIILVDYRFAWP 675
Query: 693 SRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
IS W++ S F ++ FF+
Sbjct: 676 RLFYNISSWLRDDFPTESNFPTAKKLISDFFK 707
>gi|358341159|dbj|GAA28295.2| regulator of telomere elongation helicase 1 [Clonorchis sinensis]
Length = 1325
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 224/644 (34%), Positives = 329/644 (51%), Gaps = 82/644 (12%)
Query: 125 ILGSREQLCIHREV-SLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKN---NPHLGD 180
++GSR+QLC+ EV SL SA+ ACR + R C+++ R D ++ N +
Sbjct: 91 VIGSRDQLCLLPEVNSLDSSSAKIFACR---GRVQTRTCDYY-RNFDMKRDSLMNTIKAE 146
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
+DIEDLV +G++ G CPY+M+RE + +I+F PYNYL+DP RK +E +N+
Sbjct: 147 GVVDIEDLVKLGKSTGCCPYYMSRESKTDAEIIFTPYNYLLDPKIRKLYNIELQNT---- 202
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
A FD + ++ + S I +S T G +S T + + L
Sbjct: 203 ------------AVIFDEAHNIVRSSWSMLYAYI-LSKTP-GYASRTTAEYECICTYKCL 248
Query: 301 LLKLEKRI--------AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAA 352
+ + + VP++ + + E L ++I +V A
Sbjct: 249 VQQYFYMMHCSSIITAPAVPLSVDSWNLSTFWNEVSEFLKVISI----------LVHCIA 298
Query: 353 ELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVR-EADANAADVLKGK 411
+L Q + + K+ + SNI ++ R G +S YRV + E AN V +
Sbjct: 299 DLFQ--VVFDSKN-----VSPHSNIFSLL-RLPGVDYSHCYRVFAKDEQLANRGRVTADR 350
Query: 412 A-------------SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN 458
RTLS+WC +PG AMQ+ + V +ILTSGTL P++ EL +N
Sbjct: 351 VWDSRGVGSNQPVTDRTLSYWCLSPGRAMQDLIKERVRCVILTSGTLYPIEPIQSELHMN 410
Query: 459 FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
FP+ ++NPHVI +Q+ ++ G G LNSSY RD EY+ LG T+V I +IVP G
Sbjct: 411 FPISLQNPHVIKPEQVRLAVITRGKDGIALNSSYATRDKPEYRTSLGLTLVEIIQIVPAG 470
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY---M 575
LL+FF SY +M QC+ WKN +++++ ++K+ VEPR F DY
Sbjct: 471 LLVFFTSYGMMSQCVDAWKNEQ------LYDKMLRYKRIFVEPRDKVQFAKVFSDYRDVA 524
Query: 576 AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL- 634
+ +GA FAV RG+ SEGLD AD AGR VV+ G+P+ D +VRLK YLD
Sbjct: 525 SGAVPCDVNGAALFAVMRGRASEGLDLADFAGRGVVVLGLPYPPFHDARVRLKMSYLDEQ 584
Query: 635 ------QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
QA G + K S +G+ WYNQQA RAVNQ++GRVIRH D+GAI CDER
Sbjct: 585 LAELNNQASKSGSDAKAFVASHPTGKKWYNQQAWRAVNQSIGRVIRHHRDFGAIFLCDER 644
Query: 689 FAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGST 732
FA S +SQ W+QP ++ Y+ + + F++ I +T
Sbjct: 645 FAQVSARSQFPHWMQPSMRVYTNLRAALEETSTFYKRASILVAT 688
>gi|410928893|ref|XP_003977834.1| PREDICTED: Fanconi anemia group J protein homolog [Takifugu
rubripes]
Length = 1109
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 225/689 (32%), Positives = 347/689 (50%), Gaps = 81/689 (11%)
Query: 88 QSGDSKLPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQ 146
Q+ + ++P I + +RTH Q+ QV EL+ + Y + M IL SR+ C++ EV+ S +
Sbjct: 200 QNSNRRVPKIFFGTRTHKQITQVAHELRRTVYSKVPMTILSSRDHTCVNPEVA--PHSKR 257
Query: 147 NNACRFLCKKGTNRRCNHHSRVA----DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFM 202
N C+ + R C ++ V Y+ H E DIEDLV++G+ C YF
Sbjct: 258 NELCKERLEAKDGRSCRYYHGVQKMGEQYLLQQVHGVSEAWDIEDLVSLGKRLRSCSYFA 317
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
REL I+F PYNYL+DP R+ + + IL+ DEAHN+E ++ASF ++
Sbjct: 318 ARELMAEAVIIFCPYNYLLDPLIRESMDINLSGQILVLDEAHNIEDCARESASFTVNYDS 377
Query: 263 LTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK 322
L A E + S + + + P L+ L I E E G+
Sbjct: 378 LLASRDE------LESMVKNKIREAKHEP-----LQNFCYSLINWIQESQSLMSERGYES 426
Query: 323 P-----GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQ--NKK----------S 365
G I + L IT T L +AA L +E++L N K S
Sbjct: 427 ASKVWSGRDIVGIFHTLGITDATFNMLK--ANLAAVLEKEERLGFVNGKEDVVQIPTISS 484
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREA------------DANAADVLKGKAS 413
T+ ++ + +L +FRDK + YRV ++ + DA V +
Sbjct: 485 ATSAVLKGLFMVLDYLFRDK-CRFAEDYRVALQRSYAWTNQVPPDAPDAQGFFVRPRQRQ 543
Query: 414 R----------TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
R TLS+WC NP +A + S + SI+LTSGTLSPM SF+ EL + F +++
Sbjct: 544 RQSIRVKAEMLTLSFWCLNPAVAFSDLSN-SLKSIVLTSGTLSPMGSFSSELGVKFSIQL 602
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
E HVI Q+W G V GP G L +++++ ++ ++ E+G ++++ +++ G+L F
Sbjct: 603 EANHVINKSQVWVGTVGAGPHGRKLCATFQHAETYTFQDEVGALLLHVCQVMAKGVLCFL 662
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKLKDT 581
PSY ++D+ W NT +WE++ + K + EPR F ++ Y +K
Sbjct: 663 PSYKMLDKLRDRWSNTG------LWEKLEQQKTVITEPRGGGKGDFDELLQTYYEAIKGC 716
Query: 582 ST-SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
GA+ AVCRGKVSEGLDF D RAVV G+PF + D +V LK +Y D A+S+G
Sbjct: 717 QERDGALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHAKSRG 776
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK--SQI 698
LSG WY QA RA+NQA+GR IRHR+D+GA+I D+R+ + K + +
Sbjct: 777 ---------LLSGHRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRYKNNPNKYITGL 827
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREER 727
S W++ +Q + F + + +L F RE++
Sbjct: 828 SKWVRQLVQHHDTFSNAMQSLGAFSREQQ 856
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
Y I G+ ++FP +AY QL M +I+ L + LLESPTG+GK+L LLC+TL W+++
Sbjct: 8 YTIGGVKIQFPRKAYPSQLAMMNSIIRGLNTGQHCLLESPTGSGKSLALLCSTLGWQQA 66
>gi|313224365|emb|CBY20154.1| unnamed protein product [Oikopleura dioica]
Length = 976
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 240/770 (31%), Positives = 383/770 (49%), Gaps = 102/770 (13%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
T G+DV FP++ Y Q Y++K +++L + +A+LESPTGTGKTLCLL + +A+R+
Sbjct: 6 TLNFYGVDVRFPYDPYPAQEEYIKKCVEALVKRNHAVLESPTGTGKTLCLLASVIAYREW 65
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK----TSN 118
+ N+ GS G +P I+Y SRTHSQL QV+ EL+
Sbjct: 66 AKR-----NPPKNKYGGSL--------GTESIPKIIYASRTHSQLTQVVSELRKLRDVCG 112
Query: 119 YRPKMVILGSREQLCIHREVS-LLRGSAQNNACRFL------CKKGTNRRCNHHSRVADY 171
Y M ++G R LC+ V + S Q NAC L K+ N+ S V D
Sbjct: 113 YNVDMTVVGGRSSLCVDLTVKKITNNSEQQNACHLLKAAQEEAKRKQNQELISSSGVHDI 172
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGP---------CPYFMTRELQKTVDIVFAPYNYLID 222
M DIE+LV+ P C Y+++R TV+I+ PYNY++D
Sbjct: 173 M-----------DIEELVSWCENPPPQIPDCSTAICGYYLSRSKADTVEILLMPYNYILD 221
Query: 223 PWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE-AKNCIDISSTRR 281
R+ E+KN ILI DEAHN+E +C +++S +S L E A + +++ R+
Sbjct: 222 KKIRQRNSFEFKNKILILDEAHNVEQVCEESSSHYISLKKLEIISKELAMSKASVTNPRK 281
Query: 282 GQSSDETLNPDNFAI---------LRALLLKLEKRI-AEVPINSKELGFTKPGPYIYELL 331
S+D NP++F + R+ EV K+ K +I +L+
Sbjct: 282 TNSNDP--NPESFKTYEIDEFIKNFDDFHFHFQNRVFDEVAEKGKDGMEYKVSEFIQQLI 339
Query: 332 ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHS- 390
A N+ Q + + + +D+ ++ + +E +++ + R + H
Sbjct: 340 A-TNMFQTNSLRWAGLASQVIGHFAKDRGRSG-GLSGTFLEEFVFMMEDMHRLRKNKHEY 397
Query: 391 AYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG--SIILTSGTLSPM 448
YR+ + + + ++AD+ + WCFN ++ + ++ G ++ILTSGTLSP+
Sbjct: 398 ENYRIQICQDENDSADM-------EIKIWCFNASYSIDDITQGAEGVYNLILTSGTLSPL 450
Query: 449 DSFAQELKLNFP-----LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQE 503
D + L L+ P +++ N HVI SKQ++ + G G ++ +RNR ++
Sbjct: 451 DEYINSLGLDRPTQLKTIQLMNDHVIDSKQLFVTTL-TGTKGAEFHNVFRNRQDKNMFEK 509
Query: 504 LGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW----KNTSHGNLTTIWERICKHKKPV- 558
+ ++ + P G+L+F P+Y LM W K+ + N + PV
Sbjct: 510 YAEVMRDMKEVSPGGMLVFHPTYALMAISKKFWGLHKKSATFKNSFNV---------PVF 560
Query: 559 VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFA 618
+EP E + +L + +GA+F VCRGK+SEG+DFAD GR VVITG+P+
Sbjct: 561 LEPSNKKELENMTESFERELVNDEETGAIFNGVCRGKMSEGVDFADCRGRVVVITGIPYP 620
Query: 619 TMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
DPKV LK+EYLD + K+T + G WY +A RA+NQAVGR+IRH++D
Sbjct: 621 PAKDPKVMLKKEYLDNR--------KKTGKGIIDGNKWYGIEAIRAINQAVGRIIRHKND 672
Query: 679 YGAIIFCDERFAHP--SRKSQ--ISLWIQPHIQCYSKFG-DVVYTLTRFF 723
+GAII+ D+RF + SR++ + W++ + Q S+ DV+ L FF
Sbjct: 673 FGAIIYMDKRFVNQGYSREAYDLMPSWVKRNHQVLSRTSKDVIGRLRGFF 722
>gi|340717629|ref|XP_003397282.1| PREDICTED: Fanconi anemia group J protein homolog [Bombus
terrestris]
Length = 976
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 237/773 (30%), Positives = 362/773 (46%), Gaps = 111/773 (14%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK---S 62
I GI V+ P + Y CQ+ M ++IQ + N LLESPTG+GKTL LLC LAW +
Sbjct: 205 ISGIKVKLPVKPYSCQVAVMNQLIQGCIKQENCLLESPTGSGKTLALLCGVLAWHDHHVA 264
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLP--------------------------- 95
L Q+ IS S S ++ L
Sbjct: 265 EVQNQKLEKQIQEDISRDCKSTTSHENNGEDLAESSNTKCTDYCEDYDEEEDFEDSYEKS 324
Query: 96 ------TILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSREQLCIHREVSLLRGSAQNN 148
I Y +RTH Q+ QV++EL+ ++YR KM IL SRE CI +
Sbjct: 325 KKIKISKIFYGTRTHKQIEQVVRELRKTSYRHKKMTILSSREHTCIQETTK-----NKTE 379
Query: 149 ACRFLCKKGTNRRCNHHSR-----VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMT 203
C L ++ C ++ +A + D+ DIEDLV IG+ G CPYF
Sbjct: 380 LCNDLLDTQNHKGCPFYNESNKKIIATFRGAKSRGLDDIWDIEDLVAIGKNEGLCPYFAA 439
Query: 204 RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLL 263
R L + DI+F PYNY++DP R+ + ++ ++I DEAHN+E IC + AS L
Sbjct: 440 RSLMEHADIIFCPYNYIVDPDIRESMQLDVAGHVIILDEAHNIEDICREVASVSFREDHL 499
Query: 264 TACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKL-----EKRIAEVPINSKEL 318
TA +E + S + +++D + + L+ LKL + +V NS L
Sbjct: 500 TAVATECE------SLMKQRAADSEI----YGTLQTYSLKLVNFLKTTVVDKVGYNSDNL 549
Query: 319 GFTKP---GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESIS 375
+ P G + EL ++N E Y + A + ++ + ++ ++ +
Sbjct: 550 --SSPYWTGAELLELF-NMNGLNEAMYTSF-LGACNAAIADSNRAKEERRIFQKVLQPVI 605
Query: 376 N------ILKIIFRDKGTAHSAY---YRVHVREAD------ANAADVLKGKAS----RTL 416
+ I +++F + S Y +R + E A L K RTL
Sbjct: 606 SPTTKKLIEQLMFTIRMITSSEYMNDFRACITETTVKDFKYATENTWLSSKVCTQRVRTL 665
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWA 476
C NPG+ +R + SIIL SGTLSP SF EL +F + HVI +Q++A
Sbjct: 666 KLLCMNPGVTFAPLAR-QARSIILASGTLSPTASFQSELGTSFAHVLNTGHVIPKEQVYA 724
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
+P GP+ L ++Y++ +S ++ ELG ++++ VP G+L FF SY +M + W
Sbjct: 725 ICIPQGPNEVKLRANYQSVNSWAFQDELGAVLLDVCESVPHGILCFFSSYNVMHTQMQRW 784
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS------TSGAVFFA 590
N S IW +I K+ +EPR + +Y ++ TS +GA+F A
Sbjct: 785 INNS------IWTKITSVKQIFIEPRHGGDLKDIMYEYRQVIEQTSDKQRGKITGALFLA 838
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKV+EG+DF D+ R V+ G+P+A DP + +K Y D+ K
Sbjct: 839 VFRGKVAEGIDFKDNEARCVITVGIPYAVRKDPVIDMKLSYNDMNV----------KRGL 888
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
L G +WY+ QA RA+NQA+GR +RH +D+GA++ DERF K + W++
Sbjct: 889 LKGSEWYSIQAFRALNQALGRCLRHINDWGAVLLVDERFLMHENKENLPKWVK 941
>gi|348532245|ref|XP_003453617.1| PREDICTED: Fanconi anemia group J protein [Oreochromis niloticus]
Length = 1236
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 217/685 (31%), Positives = 344/685 (50%), Gaps = 77/685 (11%)
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRG 143
+ + G K P I + +RTH Q+ Q+ ELK + Y M IL SR+ C++ +V +
Sbjct: 249 DKEKDGRKKTPKIFFGTRTHKQITQITHELKRTVYSGVPMTILSSRDHTCVNPDV--VPH 306
Query: 144 SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP----HLGDEPIDIEDLVNIGRTFGPCP 199
+ +N C+ L + R C ++ V N H DIEDLV +G+ C
Sbjct: 307 TNRNERCKDLLEAKDGRSCRYYHGVQRMRDQNTLQHVHGLRAAWDIEDLVTLGKRLRSCS 366
Query: 200 YFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
YF REL ++ I+F PYNYL+DP R+ + ++ + IL+ DEAHN+E ++AS+ L
Sbjct: 367 YFAARELMQSAWIIFCPYNYLLDPMIRESMEIDLEGQILVLDEAHNIEDCARESASYTLD 426
Query: 260 SGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELG 319
L E + ++ ++ RR + +LR L I E E G
Sbjct: 427 YKSLLMSRDELDSMVN-NNIRRSK----------HELLRGFCYSLINWIQESQSLMSERG 475
Query: 320 FTKPGPY-----IYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKST-------- 366
+ G I + L IT +T L + E + + N +
Sbjct: 476 YETAGKVWSGKEIVGIFHTLGITADTFNILKQNLAAVLEKEEHAGVVNGREDVVQIPTIS 535
Query: 367 --TACRIESISNILKIIFRDKGTAHSAYYRVHVREADA----------NAAD-VLKGKAS 413
TA ++++ +L +FRD + YRV ++++ A NA +++ +
Sbjct: 536 PPTATVLKNLFMVLDFLFRDS-CRFADDYRVALQKSYAWTNQVPPDVPNAQGFIVRPRGR 594
Query: 414 R----------TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
R TLS+WC NP +A + S V SI+LTSGTLSPMDSF+ EL + F +++
Sbjct: 595 RQTVRVKTEVLTLSFWCLNPAVAFSDLSG-SVHSIVLTSGTLSPMDSFSSELGVKFSIQL 653
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
E HVI Q+W G V GP G L ++++N ++ ++ E+G ++++ +++ G+L F
Sbjct: 654 EANHVINKSQVWVGTVGAGPQGRKLCATFQNAETYAFQDEVGGLLLHVCQVMAKGVLCFL 713
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL---FPLAIEDYMAKLKD 580
PSY ++D+ W T +W+++ + K + EPR F + Y + +K
Sbjct: 714 PSYKMLDKLRDRWTKTG------LWDKLEQQKTVITEPRGGGGKGDFDELLHTYYSAIKY 767
Query: 581 T-STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
GA+ AVCRGKVSEGLDF D RAVV G+PF + D +V LK +Y DL ++S+
Sbjct: 768 CEEKDGALLIAVCRGKVSEGLDFTDDNARAVVAVGIPFPNIKDLQVELKMKYNDLHSKSR 827
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK--SQ 697
G L G WY QA RA+NQA+GR IRHR+D+GA++ D+R+ + K +
Sbjct: 828 G---------LLPGSRWYEIQAYRALNQALGRCIRHRNDWGALVLVDDRYRNNPNKYITG 878
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRF 722
+S W++ +Q +S F D + +L F
Sbjct: 879 LSKWVRQLVQHHSTFSDAMQSLVAF 903
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L LLESPTG+GK+L LLC+ L W+
Sbjct: 8 YTIGGVKIHFPCKAYPSQLAMMNLIVRGLNTGQYCLLESPTGSGKSLALLCSALGWQ--- 64
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDS 92
+ G Q GS + + SQ DS
Sbjct: 65 --HAQFGKPAKLQEGGS-TGPDKSQKSDS 90
>gi|297745566|emb|CBI40731.3| unnamed protein product [Vitis vinifera]
Length = 1218
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 242/801 (30%), Positives = 364/801 (45%), Gaps = 137/801 (17%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATL 57
Y I GI VEFP++ Y QL +M +VI +L C+ALLESPTGTGK+L LLC+ L
Sbjct: 13 VYHIGGIAVEFPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSAL 72
Query: 58 AWRKSL--------------------------GSFSTLGSQVNNQISGSQSSVNSSQSGD 91
AW+K+ G F + S S+ N
Sbjct: 73 AWQKNYRPKNMNGDVSNSKPDPEALSDPLGHGGGFVPETEPSTPENSEPASAANGKNKKK 132
Query: 92 SKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACR 151
+ PTI Y SRTH+Q+ QVI+E + + YR M +L SR+ C +R+++ + + C+
Sbjct: 133 KRKPTIFYASRTHTQISQVIREYRKTAYRVPMAVLASRKHYCTNRKIN--AKANIDEECK 190
Query: 152 FLCKK---GTNRRCNHHSRVADYMKNNPHLGD----EPIDIEDLVNIGRTFGPCPYFMTR 204
L + G N H +K +P L E DIEDLV +G+ C Y+ R
Sbjct: 191 LLVRDQDFGCPEFKNMHK-----VKGHPSLQKGGCHEAHDIEDLVKVGQVVKGCAYYAAR 245
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH------------------NL 246
++ +VF PY+Y+I+P R + ++ + +ILI DEAH N+
Sbjct: 246 DMADNAQLVFCPYSYIINPVIRGAMELDIEGAILILDEAHSVFVLYMTSPIMSETITFNI 305
Query: 247 EGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ--SSDETLNPDNFAILRALLLKL 304
E + DA S D+ +L T GQ +D + + + + ++ +
Sbjct: 306 EDMARDAGSVDVEEDVLHKL-----------QTELGQLCPADAMIYQPLYEMTQDIISWI 354
Query: 305 EKRIAEVPINSKELGFT-KPGPYIYELLADLNITQETAYKLIDIVE--VAAELLQEDKLQ 361
+++ + + F+ G L + NI+Q++ L + + A + E ++
Sbjct: 355 DRKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRVA 414
Query: 362 NKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKA--------- 412
+ + +E + + L F + G Y R +A L +
Sbjct: 415 HLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGHHLSVRLHLIKLMLVE 474
Query: 413 -----SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPH 467
+ T S WC NP + + + L + S+ILTSGTLSPM SF+ EL + F +E PH
Sbjct: 475 FIQNWTCTFSLWCLNPAVVFRGIADLSL-SVILTSGTLSPMHSFSSELGVQFGTCLEAPH 533
Query: 468 VI-TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
VI Q+WA I P Y LN+SY+ D+ ++ LG ++ I +IVP
Sbjct: 534 VIDIESQLWAAIFSTSPGNYPLNASYKTADAYAFQDALGKSLEEIFKIVPGQ-------- 585
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR---QSSLFPLAIEDYMAKLKDTST 583
W ++ + K +EPR Q P+ Y + ++
Sbjct: 586 ---------------------WSQLNEQKFLFIEPRGGSQDDFEPILKAYYESSQDNSKK 624
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA F AV RGKVSEG+DF+D RAV+I G+PF + D +V K++Y D+ Y
Sbjct: 625 KGAAFLAVFRGKVSEGIDFSDENARAVIIVGIPFPNVHDIQVAQKKKYNDM--------Y 676
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII-FCDERFAHPSRKSQISLWI 702
K +K LSG +WY QA RA+NQA GR IRHR DYG II DERF + IS W+
Sbjct: 677 KSSK-DLLSGNEWYCHQAFRALNQAAGRCIRHRFDYGGIILLADERFREDRNTAYISKWL 735
Query: 703 QPHIQCYSKFGDVVYTLTRFF 723
+ I+ Y F + L FF
Sbjct: 736 RKSIKQYESFDMSLERLKSFF 756
>gi|390345521|ref|XP_781875.3| PREDICTED: Fanconi anemia group J protein-like [Strongylocentrotus
purpuratus]
Length = 1704
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 219/735 (29%), Positives = 351/735 (47%), Gaps = 114/735 (15%)
Query: 81 QSSVNSSQSGDSK---LPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHR 136
Q N + GD+K +P I + +RTH Q+ Q+I+EL + Y+ +M ILGSRE C+H
Sbjct: 299 QEEKNVKRDGDAKPIKVPRIYFGTRTHKQIAQIIRELGRTAYKSVRMSILGSREHTCVHP 358
Query: 137 EVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD----EPIDIEDLVNIG 192
EVS R +N C+ L T C + V MK + D E DIEDLV +G
Sbjct: 359 EVS--RSKNKNEGCKDLLDDKTGGTCKFFTNVHK-MKQQWQIRDYGLTEAWDIEDLVALG 415
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
+ CPYF +R L+ D++F PYNYLIDP R+ + ++ K+ ++I DEAHN+E +
Sbjct: 416 KRVKACPYFSSRSLKDQADVIFCPYNYLIDPMIRQSMEIDLKDQVVILDEAHNIEDSARE 475
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
AAS ++S L E + ++ ++ ++ L + I +
Sbjct: 476 AASLTVTSEQLKDATDELDKLLTFK-----------FREEHTRVIHSVSSSLLRWINDYS 524
Query: 313 INSKELGFTKP-----GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTT 367
++ F + G + LA++ I+ T L + E E ++ T
Sbjct: 525 STLRQNDFDRASRMWSGQEMVAALANMGISPATLPTLQHHLSALMEDEDERGIKEMGPTL 584
Query: 368 ACRIESISN----ILKIIFRDKGTAHSAY----YRVHVREADANAADVLKGKASRT---- 415
++ N I +F+D Y + R N + + R+
Sbjct: 585 GVLTGALFNGLFVIFNFMFKDDMKFTKDYKVALLKTKARNQFPNTNNTWIQRRRRSAEAV 644
Query: 416 ----LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITS 471
L++WC NP +A +F V +IILTSGTLSPM SFA EL ++FP+++E HVI
Sbjct: 645 FTLSLNFWCLNPAVAFTDFGEA-VRTIILTSGTLSPMSSFASELGVSFPIQLEANHVINK 703
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
Q+W GP+G+ LN++YRN ++ ++ +LG ++ + R++P G+L F SY +M++
Sbjct: 704 SQVWVSTWAFGPNGHSLNATYRNAETFAFQDDLGRVVLEVCRVIPYGVLCFVSSYSMMNK 763
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK--------DT 581
I WK T +++++ K+ + E R S+F ++++ +K +
Sbjct: 764 VIERWKTTG------LYDQLQSLKQVMCEARGGDKSVFDEQLKEFYDTIKVCEENGLENY 817
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ-- 639
+G + FAVCRGK+SEG+DFAD+ RAV+ G+P+ + D +V KR Y D + S+
Sbjct: 818 PITGVLMFAVCRGKISEGMDFADNNARAVITVGIPYPNVRDAQVEAKRHYNDQHSASRGL 877
Query: 640 --GGEYKETKL------------------------------------------------S 649
G E+ E +
Sbjct: 878 LTGSEWYEVQAYRALNQALGRCIRHKVLMLDEVGIPYPNVRDAQVEAKRHYNDQHAAARG 937
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK--SQISLWIQPHIQ 707
L+G +WY QA RA+NQA+GR IRH+ D+GAI+ DERF+ K S IS W++ +
Sbjct: 938 LLTGSEWYEVQAYRALNQALGRCIRHKKDWGAILLVDERFSRNPNKYCSGISKWVRGKVI 997
Query: 708 CYSKFGDVVYTLTRF 722
+ D + +L+ F
Sbjct: 998 HNTHARDALTSLSEF 1012
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
TY I G+ + FP +AY QL M +I+ + + N LLESPTG+GK+L LLC++LAW++
Sbjct: 35 TYTILGVKLAFPCKAYPTQLSMMSMIIKGINRRQNCLLESPTGSGKSLALLCSSLAWQE 93
>gi|449269835|gb|EMC80576.1| Fanconi anemia group J protein like protein [Columba livia]
Length = 1261
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 237/765 (30%), Positives = 374/765 (48%), Gaps = 98/765 (12%)
Query: 55 ATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGD-SKLPTILYTSRTHSQLRQVIQE 113
AT A R S G + + S+ +SGD S +P I + +RTH Q+ Q+ +E
Sbjct: 215 ATSAPRTSSGPCTECSCSSGKETDKDTSNTKKKESGDQSFIPKIYFGTRTHKQISQITRE 274
Query: 114 LKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM 172
LK + Y M IL SR+ CIH VS GS +N C L + + C ++ V
Sbjct: 275 LKRTAYSSVPMTILSSRDYTCIHPVVSN-SGSNRNEMCVELLEGKHGKSCLYYHGVHKVS 333
Query: 173 KNN----PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+++ H + DIEDLV++G+ CPYF REL DIVF PYNYL+DP R+
Sbjct: 334 EHHGLQSAHNMSQAWDIEDLVHLGKKLRACPYFAARELMVGADIVFCPYNYLLDPQIRES 393
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDET 288
+ + K ++I DEAHN+E ++ S+ ++ L A E ++
Sbjct: 394 MDINLKGHVVILDEAHNIEDSARESVSYGVTENQLRAAQEELDFMVN-----------NN 442
Query: 289 LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP-----GPYIYELLADLNIT------ 337
+ + LRA+ L + E E G+ G + +L + IT
Sbjct: 443 IRQMDHGPLRAVCCSLTNWLRESSSQLVERGYETSCKVWSGKEMLPILHQMGITGITFPI 502
Query: 338 -QETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI--ESISNILKIIFRDKGTAHSAYYR 394
Q+ +++ E + L +E+ ++ + A +I + + +L +F+D + ++ YR
Sbjct: 503 LQKHLATVLEKEEKISVLGREELIEIPVVSPATQIVLKGLFMVLLFLFKD-NSRYADDYR 561
Query: 395 VHVREADA----NAADVLKGKASRT----------------LSWWCFNPGIAMQEFSRLE 434
V +++ A N DV + A T L++WC NP +A + S +
Sbjct: 562 VALQQTYAWMNENQPDVSETSALVTRPRHKRNLRQKTMVHVLNFWCLNPAVAFSDLS--D 619
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V +I+LTSGTLSPMDSF+ EL + F +++E H+I + Q+W G V GP+ L +++++
Sbjct: 620 VRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHIIRNSQVWVGTVGAGPNRRKLCATFQH 679
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
++ E++ E+G ++++ + V G+L F PSY L+D+ W +T +W +
Sbjct: 680 TETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKDRWMHTG------LWRNLELV 733
Query: 555 KKPVVEPR--QSSLFPLAIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
K + EP+ S F ++ Y +K GA+ AVCRGKVSEGLDF D RAV+
Sbjct: 734 KTVIAEPQGGAKSDFDELLKIYYDAIKCKGERDGALLIAVCRGKVSEGLDFCDENARAVI 793
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
G+PF + D +V LKR+Y D ++G L G WY QA RA+NQA+GR
Sbjct: 794 TIGIPFPNVKDLQVELKRKYNDQHKNTRG---------LLPGSQWYEIQAYRALNQALGR 844
Query: 672 VIRHRHDYGAIIFCDERFAHPSRK--SQISLWIQPHIQCYSKFGDVVYTLTRFFREERIC 729
IRHR+D+GA+I D+RF + K + +S WI+ IQ + F + +L F
Sbjct: 845 CIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHENFSSALESLQAFA------ 898
Query: 730 GSTNLKLIKTEVSGDVRELKPVDLLDKISLE--EVPSSTPAVDQA 772
R K +D L + S E VPS++ + QA
Sbjct: 899 ---------------TRNQKGIDALSECSSEFPHVPSNSKDLSQA 928
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L N+ + LLESPTG+GK+L LLC+ L+W++SL
Sbjct: 8 YTIGGVKIRFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQSL 67
>gi|339265705|ref|XP_003366015.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316965098|gb|EFV49922.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 824
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 242/822 (29%), Positives = 408/822 (49%), Gaps = 115/822 (13%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
++ + G + FPF Y Q M++ +++L++ N L+ESPTGTGK+L LLCA LAW++
Sbjct: 5 SFFVNGTKINFPFSPYPAQKAIMDRTLRTLKHSQNCLVESPTGTGKSLALLCAALAWQRE 64
Query: 63 LGSFSTLGSQVNNQI-------------------------------------SGSQ-SSV 84
S GS++ Q+ + SQ S+
Sbjct: 65 FSS--AQGSEIAMQLVPNLNESHDEVDCNSELSEEIFCSPNCKRKNMDKFSTNKSQCSAA 122
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVS---- 139
NS+ ++P I Y +RTH QL Q+++ELK + Y+ +M I+ SR+ C++ +V+
Sbjct: 123 NSAACQKRRVPKIFYATRTHKQLSQMVRELKKTEYKNVRMTIMASRDFTCLNDKVNNHCD 182
Query: 140 -------------------LLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPH 177
L++ + + ++ + R + S RV D +
Sbjct: 183 KAAACLQVKDVLEIFLQFLLIKNCSYYKGLQAFGQETSMLRKHVQSSKKRVKDIWEIIEE 242
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRE-LQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
D DIE+LV GR CPYF + + + + +++F PY YLIDP R + K
Sbjct: 243 NDDFAWDIEELVEAGRKLNFCPYFASVDNMYQDANLIFCPYGYLIDPVVRSSSNINLKGQ 302
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
++IFDEAHN+E C + ASF ++ L + + ++ S ++L + +
Sbjct: 303 VIIFDEAHNMEDECCEKASFQITKQELVDAVEYLSSIEELVP-----ESKKSLQDNCTEL 357
Query: 297 LRALLLKLEKR-IAEVPINSKELGFTK--PGPYIYELLADLNITQETAYKLIDIVEVAAE 353
+++++ ++K+ + E N E +TK G +Y L ++ + + A + D V
Sbjct: 358 VKSVIEWIDKKSVIEEMTNHSEKFYTKIWSGRAMYAELQEMKLHHDKAIQKFDSVFKPDN 417
Query: 354 LLQ------EDKLQNKKSTTACRIESISNILKIIFRDKG-TAHSAY----YRVHVREADA 402
L E K N+ T +E + LK I++D T +Y Y++ +++
Sbjct: 418 SLNITGTVFEKKHDNQPLTV---LEKLILTLKYIYKDYHLTPTDSYDCYSYKLCLKKEKL 474
Query: 403 -----NAADVLKGKAS-----RTLSWWCFNPGIA--MQEFSRLEVGSIILTSGTLSPMDS 450
N+A+ K ++++WC NPGI + S S+IL SGTL+P+ +
Sbjct: 475 SGFTFNSAEGWLSKKRLNCFVDSINFWCMNPGIVNIFHDISS-SARSVILASGTLAPLKT 533
Query: 451 FAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVN 510
+A EL L F +E PHVI ++W G VGP L ++Y+ S E++ ELG ++
Sbjct: 534 YANELGLPFQYLLEAPHVILPDRVWIGATGVGPKHVPLKATYQLAQSTEFQDELGRLLIE 593
Query: 511 IARIVPDGLLIFFPSYYLMDQCIACWK----NTSHGNLTTIWERICKHKKPVVEPRQS-S 565
I ++ PDG+L F PSY +D + WK N + +++W ++ +K VVEPR++ S
Sbjct: 594 ICKVTPDGVLCFLPSYTFIDCLLTRWKKVPPNCNFQVNSSLWSQLNVYKMVVVEPRKNGS 653
Query: 566 LFPLAIEDYMAKLKD-----TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
L ++ + +KD +GA+ AV RGK+SEG+DFAD RAVV G+P+ M
Sbjct: 654 DVRLIMDRFTETIKDPKKVGPQCNGALLLAVYRGKISEGVDFADQQARAVVAVGIPYPDM 713
Query: 621 TDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
D ++RLK +Y + + ++ + L +SG WY QA RA+NQA+GR +RH+ D+G
Sbjct: 714 EDMRIRLKIQYNNERLKNAKRIAEMAPL--ISGNQWYQAQAFRALNQALGRCLRHKLDWG 771
Query: 681 AIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRF 722
A++ D RF + +S WI+ +++CY +F ++ L F
Sbjct: 772 ALLLVDSRFQNAEYSCNLSTWIRKNLRCYDRFDQMICNLQTF 813
>gi|301629712|ref|XP_002943978.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Xenopus (Silurana) tropicalis]
Length = 688
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 242/424 (57%), Gaps = 41/424 (9%)
Query: 390 SAYYRVHVREADANA-----ADVL---KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILT 441
S YY+VH+ D N DV K + + LS+WCF+PG M + R V +ILT
Sbjct: 17 SKYYKVHI-HPDTNQRKKPRGDVWSNSKKQGGKVLSYWCFSPGYTMHDLVRQGVRCVILT 75
Query: 442 SGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
SGTL P+ SF E+++ FP+ +ENPHVI QIW GIVP GP G L+SSY R S EY
Sbjct: 76 SGTLCPLSSFTMEMQIPFPVSLENPHVIDKHQIWVGIVPRGPDGSQLSSSYDRRFSEEYL 135
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEP 561
LG TI NIAR+VP GLL+FFPSY ++D+ I WK + +I K VEP
Sbjct: 136 SSLGKTIGNIARVVPHGLLVFFPSYPVLDKSIEFWKERG------LSAKIDDVKPMFVEP 189
Query: 562 RQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMT 621
R F I+ Y K++ + SGA F AVCRGK SEGLDFAD+ GR V+ITG+PF
Sbjct: 190 RGKGSFTEVIDAYYEKIRSANGSGASFLAVCRGKASEGLDFADNNGRGVIITGLPFPPRM 249
Query: 622 DPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
DP+V LK ++LD +SQG + +LSG++WY QQASRAVNQA+GRVIRHR+DYGA
Sbjct: 250 DPRVVLKMQFLDEMRRSQG-----SAGLYLSGQEWYRQQASRAVNQAIGRVIRHRNDYGA 304
Query: 682 IIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEV 741
I CD RF ++Q+ W++P+++ Y FG ++ +++FFR LK++ T
Sbjct: 305 IFLCDHRFNQSDARAQLPSWVRPYVRTYDNFGHIIRDVSQFFR-------VALKIMPTPT 357
Query: 742 SGDVRELKPVDLLD----------KISLEEVPSSTPAVDQACYSLHEVKNRNTSSHSGEI 791
++ PV L+ S E P +D SL R S E+
Sbjct: 358 PHSDQKEGPVPLIGCSSQSPRPVAPSSSREAPKKAKTLDSHVPSL----KRKRDECSSEV 413
Query: 792 VPAN 795
VP +
Sbjct: 414 VPGS 417
>gi|301608630|ref|XP_002933884.1| PREDICTED: Fanconi anemia group J protein-like [Xenopus (Silurana)
tropicalis]
Length = 1229
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 216/677 (31%), Positives = 347/677 (51%), Gaps = 74/677 (10%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACR 151
K+P I + +RTH Q+ Q+ +EL+ + Y +M IL SRE C+H ++ S +N C+
Sbjct: 249 KVPKIFFGTRTHKQIAQITRELRRTAYSSVRMTILSSREHTCVHPDIH----SNRNEKCK 304
Query: 152 FLCKKGTNRRCNHHSRVADYMKNN----PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQ 207
L + C + V + N H D+ DIE+LV +G+ CPYF REL
Sbjct: 305 ELLEAKDGHSCRFYHGVQKMNEQNLLKYRHGVDKAWDIEELVGLGKRLRACPYFAARELM 364
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
+ DIVF PYNYL+D R+ + + + ++I DEAHN+E ++ASF S L
Sbjct: 365 QEADIVFCPYNYLLDSQIRESMDIFLEGQVVILDEAHNIEDCARESASFSCSDEQLMY-- 422
Query: 268 SEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP---- 323
A++ ID + SD LRA+ L I E E +
Sbjct: 423 --ARDEIDSMVNHGIRVSDH-------EPLRAVCYSLTNWIRECSDQLVEREYEASCKVW 473
Query: 324 -GPYIYELLADLNITQET----AYKLIDIVEVAAELL----QED--KLQNKKSTTACRIE 372
G I + D+ IT T L +VE ++ QE+ K+ T ++
Sbjct: 474 NGKEILAIFHDMGITNATFPLLKANLAAVVEKEEKITMLHGQENVIKIPTLSPQTQMVLK 533
Query: 373 SISNILKIIFRDKGTAHSAYYRVHVREAD--ANAADV----------LKGKASR------ 414
+ +L +FR + + YR+ ++++ AN D+ +A R
Sbjct: 534 GLFLVLDYLFR-QNNRFAEDYRIALQQSYTWANRQDIPDENGFFARPRNRRAVRQKIMVY 592
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
TL++WC NP +A + S +I+LTSGTLSPM SF+ EL + F +++E HVI Q+
Sbjct: 593 TLNFWCLNPAVAFSDLSS-NARTIVLTSGTLSPMGSFSSELGVKFSIQLEANHVIHKSQV 651
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
W G V GP G L +++++ ++ +++ E+G ++++ + V G+L F PSY ++++
Sbjct: 652 WVGTVGAGPKGRKLCATFQHTETFDFQDEIGALLLSVCQTVSHGVLCFLPSYKMLEKLKD 711
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-DTSTSGAVFFAV 591
W +T +WE + + K + EP+ + F ++ Y ++ GA+ AV
Sbjct: 712 RWMHTG------LWENLERIKTVIKEPQGGDKTDFDKMLQMYYDAIRYKGEKDGALLIAV 765
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
CRGKVSEGLDF+D+ RAVV G+PF + D +V LKR+Y D A+S+G L
Sbjct: 766 CRGKVSEGLDFSDNNARAVVTVGIPFPNIKDLQVELKRKYNDQHAKSRG---------LL 816
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRKSQISLWIQPHIQCYS 710
G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++P + +S W++ +Q +S
Sbjct: 817 PGSQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPKYITGLSKWVRQLVQHHS 876
Query: 711 KFGDVVYTLTRFFREER 727
F + +L F + ++
Sbjct: 877 TFNGALESLNEFSKNQQ 893
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+ Y I G+ + FP AY QL M +++ L K + LLESPTG+GK+L LLC+ LAW+
Sbjct: 5 LSEYTIGGVKILFPCRAYPSQLAMMNSIMRGLNCKQHCLLESPTGSGKSLALLCSALAWQ 64
Query: 61 KSL 63
+SL
Sbjct: 65 QSL 67
>gi|224076637|ref|XP_002196566.1| PREDICTED: Fanconi anemia group J protein homolog [Taeniopygia
guttata]
Length = 1249
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 230/716 (32%), Positives = 362/716 (50%), Gaps = 71/716 (9%)
Query: 55 ATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSK-LPTILYTSRTHSQLRQVIQE 113
AT + + LG + + S ++GD +P I + +RTH Q+ Q+ +E
Sbjct: 215 ATFSPQTPLGPCTECSCSSGREPDKDPSHTKKKENGDRLCVPKIFFGTRTHKQITQISRE 274
Query: 114 LKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM 172
LK + Y M IL SR+ CIH VS S +N C L + + C+++ V
Sbjct: 275 LKRTAYSSVPMTILSSRDYTCIHPVVS--NSSNRNEMCVELLEGKHGKSCSYYHGVHKLS 332
Query: 173 KNN---PHLG-DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ + P G + DIEDLV++GR CPYF REL DIVF PYNYL+DP R
Sbjct: 333 EQHALQPAAGLCQAWDIEDLVSLGRKLRACPYFAARELMVGADIVFCPYNYLLDPQIRDS 392
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDET 288
+ + K+ ++I DEAHN+E ++ S+ ++ L A E ++ S+ R Q E
Sbjct: 393 MDINLKDQVVILDEAHNIEDCARESVSYGVTERQLQAAREELDFMVN-SNIR--QKHHEP 449
Query: 289 LNPDNFAILRALLLKLEKRIAEVPINSKELGF-TKPGPYIYELLADLNITQETAYKLIDI 347
L A+ +L+ L++ ++ + E G + L + IT T L
Sbjct: 450 LR----AVCCSLINWLQESSGQLVERAYETACKVWSGKEMLNFLYKMGITGITFPILQK- 504
Query: 348 VEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------DKGTAHSAYYRVHV 397
+AA L +E+K+ + +S +I+ + + + + YRV +
Sbjct: 505 -HLAAVLEKEEKVSMHGREELIEVPVVSPAAQIVLKGLFMVLSCLFKENSRFADDYRVAL 563
Query: 398 REA----------DANAADVL----KGKASR------TLSWWCFNPGIAMQEFSRLEVGS 437
++ DA+ + K+SR L++WC NP +A + + EV +
Sbjct: 564 QQTYTWMTEDQRDDADTSSFFMRPKHKKSSRQKTLVHMLNFWCLNPAVAFSDLN--EVRT 621
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
I+LTSGTLSPMDSF+ EL + F +++E HVI + Q+W G V VGP+G L +++++ ++
Sbjct: 622 IVLTSGTLSPMDSFSSELGVKFSIQLEANHVIQNSQVWVGTVGVGPNGRKLCATFQHTET 681
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
E++ E+G ++++ + + G+L F PSY ++D+ W +T +W ++ K
Sbjct: 682 FEFQDEVGALLLSVCQTLGQGILCFLPSYKMLDKLKDRWMHTG------LWRKLEDVKTV 735
Query: 558 VVEPR--QSSLFPLAIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
+ EP+ S F ++ Y +K GA+ AVCRGKVSEGLDF D RAVV G
Sbjct: 736 IAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSEGLDFCDENARAVVTIG 795
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+PF + D +V LKR+Y D ++G LSG WY QA RA+NQA+GR IR
Sbjct: 796 IPFPNVKDLQVELKRKYNDQHKSTRG---------LLSGSQWYEIQAYRALNQALGRCIR 846
Query: 675 HRHDYGAIIFCDERFAHPSRK--SQISLWIQPHIQCYSKFGDVVYTLTRF-FREER 727
HR+D+GA+I D+RF K + +S WI+ IQ + FG + +L F R +R
Sbjct: 847 HRNDWGALILVDDRFKKNPNKYITGLSKWIRQQIQHHDTFGTALESLHAFALRNQR 902
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L ++ + LLESPTG+GK+L LLC+ L+W+++L
Sbjct: 8 YTIGGVKILFPCKAYPSQLAMMNAIVKGLNSRQHCLLESPTGSGKSLALLCSALSWQQAL 67
>gi|74271901|ref|NP_001028230.1| Fanconi anemia group J protein homolog [Gallus gallus]
gi|78099252|sp|Q3YK19.1|FANCJ_CHICK RecName: Full=Fanconi anemia group J protein homolog; Short=Protein
FACJ; AltName: Full=ATP-dependent RNA helicase BRIP1
gi|72199300|gb|AAZ66861.1| BRIP1 [Gallus gallus]
Length = 1252
Score = 332 bits (851), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 216/675 (32%), Positives = 338/675 (50%), Gaps = 78/675 (11%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRF 152
+P I + +RTH Q+ Q+ +ELK + Y M IL SR+ CIH VS S +N C
Sbjct: 252 IPKIFFGTRTHKQIAQITRELKRTAYSGVPMTILSSRDYTCIHPVVSS-SNSNRNELCVE 310
Query: 153 LCKKGTNRRCNH----HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQK 208
L + + C + H Y + H + DIEDLV++G+ CPYF REL
Sbjct: 311 LLEGKHGKSCLYYHGVHKLSEHYALQSAHNTYQAWDIEDLVSLGKKLRACPYFAARELMV 370
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
DIVF PYNYL+DP R+ + + K ++I DEAHN+E +A S+ ++ L A
Sbjct: 371 GADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDSAREAVSYSVTESQLNAARE 430
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP----- 323
E ++ + + LRA+ L + E E G+
Sbjct: 431 ELDFMVN-----------NNIRQKDHEQLRAMCCSLTNWLRESSSQLVETGYETSCKVWS 479
Query: 324 GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN-----------KKSTTACRIE 372
G + D+ IT ++ ++ ++A L +E+K+ S T ++
Sbjct: 480 GKEMLNHFHDMGITN-ISFPILQ-KHLSAVLEKEEKISMFGKEELVEIPIVSSATQIVLK 537
Query: 373 SISNILKIIFRDKGTAHSAYYRVHVREADA----NAADV-------LKGKASRTL----- 416
+ +L +F+D + + YRV +++ A N DV K K R L
Sbjct: 538 GLFMVLLYLFKD-NSRFADDYRVALQQTYAWTNDNQPDVSDTSAFFTKTKHKRNLRHKTV 596
Query: 417 ----SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
++WC NP +A + + +V +++LTSGTLSPMDSF+ EL + F +++E HVI +
Sbjct: 597 VHMLNFWCLNPAVAFSDLN--DVRTVVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNS 654
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
Q+W G + GP+G L +++++ ++ E++ E+G ++++ + V G+L F PSY L+D+
Sbjct: 655 QVWVGTIGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSYKLLDKL 714
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-DTSTSGAVFF 589
W +T +W + K + EP+ S F ++ Y +K GA+
Sbjct: 715 KDRWIHTG------LWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKFKGEKDGALLI 768
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
AVCRGKVSEGLDF D RAV+ G+PF + D +V LKR+Y D ++G
Sbjct: 769 AVCRGKVSEGLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKTTRG--------- 819
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK--SQISLWIQPHIQ 707
L G WY QA RA+NQA+GR IRHR D+GA+I D+RF + K + +S WI+ +Q
Sbjct: 820 LLPGSQWYEIQAYRALNQALGRCIRHRSDWGALILVDDRFRNNPNKYITGLSKWIRQQVQ 879
Query: 708 CYSKFGDVVYTLTRF 722
+ FG + +L F
Sbjct: 880 HHENFGSALESLHAF 894
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L N+ + LLESPTG+GK+L LLC+ L+W++SL
Sbjct: 8 YTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQSL 67
Query: 64 GSFSTLGS 71
S L S
Sbjct: 68 YEKSLLKS 75
>gi|19074028|ref|NP_584634.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|19068670|emb|CAD25138.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|449329243|gb|AGE95516.1| ATP-dependent DNA-binding helicase [Encephalitozoon cuniculi]
Length = 678
Score = 332 bits (850), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 230/728 (31%), Positives = 359/728 (49%), Gaps = 59/728 (8%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M KI G+ +E PFE Y Q+V M K+I L + + L+ESPTGTGK+L ++CA L +
Sbjct: 1 MARIKISGVPIEMPFEPYPAQIVTMTKLISCLMTRTSGLVESPTGTGKSLSIICAVLGYN 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ L S G + G ++ + KL I+ SRTH QL Q++ +L+ + YR
Sbjct: 61 EHLKR-SIRGIGAKRREGGGP---KGEEAREEKLKIII-CSRTHKQLDQLVDQLRKTQYR 115
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
P++ IL SR Q CI ++S + + +N C L K G+ R+A +GD
Sbjct: 116 PRISILASRAQYCISPKLSDV--ADKNTGCSELVKSGSCAYFTGKDRLA------KKVGD 167
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
+ DIE+L GR CPY+ +R L + +++FAPYNYLID R+ G+ +NS++I
Sbjct: 168 KIFDIEELKGEGRRCVGCPYYASRILNEDAEVIFAPYNYLIDSRIRESTGISLENSVVIV 227
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHN+E +C + S +LSS ++ +E + S G+ + +N +F R L
Sbjct: 228 DEAHNIEDVCRSSGSIELSSRIMEIIQNEILGAVKRSGA-LGEIRMDFVNLMDF--FRKL 284
Query: 301 LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
E + + + G I E L + I +E K+ + + A ED
Sbjct: 285 REGAESTDEFDRVTAGGKLRIRKGREIKEELERMGIGKEFVLKIKN--SIYAIQKSEDAK 342
Query: 361 QNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASR-TLSWW 419
+T +E + ++L I A+S + N +V ++ R + ++W
Sbjct: 343 DLLNVSTFHVLEGLDSVLSAIHFSDCDAYSFVFH------KMNDENVKNSRSCRFSYNFW 396
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIV 479
+ G + F +V S++L SGTL+P SF+ EL F + PH+IT KQ++ V
Sbjct: 397 LLDGGYTFRSFVG-KVRSVVLLSGTLTPFSSFSSELGHEFAHTIVAPHLITQKQVFVSCV 455
Query: 480 PVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD--GLLIFFPSYYLMDQCIACWK 537
G L +Y D+ +Y +L IV+++ + D G L+F PSY ++
Sbjct: 456 RKGHLLKELIGTYGVSDTPQYLDQLCRVIVDVSCKIKDHGGTLVFVPSYSFLENLQKRMG 515
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD--TSTSGAVFFAVCRGK 595
S G L VEP+ + E M + K+ + AVF V RGK
Sbjct: 516 GVSSGLL--------------VEPKSGA--GNEFEKVMRRYKNRIATKQSAVFMCVYRGK 559
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGED 655
SEG+DF D RAV+ G+P+ ++ DP+V LK+E+ D +YK +G
Sbjct: 560 ASEGIDFKDSFARAVIAVGIPYPSLHDPQVELKKEFND--------KYKS-----FNGRL 606
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDV 715
WY QA RAVNQA+GR IRH+ D+G ++ D R++ +SQ+S W+ +I+ Y +
Sbjct: 607 WYEAQAFRAVNQALGRAIRHKDDWGIVMLLDSRYSEKRVQSQLSKWVAENIKTYDSYDGC 666
Query: 716 VYTLTRFF 723
V L RF
Sbjct: 667 VSELVRFL 674
>gi|396080955|gb|AFN82575.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 678
Score = 331 bits (849), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 230/744 (30%), Positives = 358/744 (48%), Gaps = 91/744 (12%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M KI G+ +E PFE Y Q++ M K+I L + L+ESPTGTGK+L +LCA L +
Sbjct: 1 MVRIKISGVPIEMPFEPYPAQIITMTKLISCLMTGTSGLVESPTGTGKSLSILCAALGYS 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ L G + G + + + KL I+ SRTH QL Q+I +L+ + Y+
Sbjct: 61 EHLKRGIRSGCGKRREGGG----MKGEEVKEEKLKIII-CSRTHKQLDQLIDQLRKTQYK 115
Query: 121 PKMVILGSREQLCIH---REVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPH 177
P++ IL SR Q C+ REV+ +N C L K G R+A
Sbjct: 116 PRISILASRSQYCVSPKLREVT-----DKNTGCNELVKSGNCAYFTGKDRLA------KR 164
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSI 237
+GD DIE+L GR G CPY+ +R L + +++FAPYNYLIDP R+ G+ +NS+
Sbjct: 165 VGDRVFDIEELKGEGRRCGGCPYYASRILNEDAEVIFAPYNYLIDPRIRENTGIGLENSV 224
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAIL 297
+I DEAHN+E +C + S +L S I +N I + R G + L+ N
Sbjct: 225 VIIDEAHNIEDVCRSSGSIELGS----RAIEIIQNEILGAVKRSGILGEIKLDFIN---- 276
Query: 298 RALLLKLEKRIAEVPINSKELG--------FTKPGPYIYELLADLNITQETAYKLIDIVE 349
L+ +++ E N+ E + G I + L + I++E K+ + +
Sbjct: 277 ---LMDFFRKLREGADNTDEFDRDTFGGKLRIRRGKDIKDELERMGISKEFVLKIKNSIY 333
Query: 350 VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK 409
+ + L N +T +E + ++L I A+S + N +V
Sbjct: 334 AIQKNEEAKDLLN--VSTLHVLEGLDSVLSAIHFSGCDAYSFVFH------KVNDENVRN 385
Query: 410 GKASR-TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHV 468
+AS+ + ++W + G + F +V S++L SGTL+P SF+ EL F + PH+
Sbjct: 386 SRASKFSYNFWLLDAGYTFRSFVG-KVRSVVLLSGTLTPFSSFSSELGHEFAHSIVAPHL 444
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP--DGLLIFFPSY 526
IT KQ++ V G L +Y D+ +Y +L IV+++ + G L+F PSY
Sbjct: 445 ITQKQVFVSCVRKGHLSKELTGTYGVSDTPQYLDQLCKIIVDVSSKIKGHGGTLVFVPSY 504
Query: 527 YLMDQCIACWKNTSHGNLT-------TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
++ T+ G LT +E++ K K + +QS
Sbjct: 505 SFLENLQKRMGGTNPGILTEPKNGAGNEFEKVMKRYKNRIAMKQS--------------- 549
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
AVF V RGK SEG+DF D RAV+ G+P+ ++ DP+V LK+E+ D
Sbjct: 550 ------AVFMCVYRGKASEGIDFKDSFARAVIAVGIPYPSLHDPQVELKKEFND------ 597
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
YK +G WY QA RAVNQA+GR IRH+ D+G ++ D R++ ++ +S
Sbjct: 598 --RYKS-----FNGRLWYEAQAFRAVNQALGRAIRHKDDWGIVMLLDNRYSEKRVQNHLS 650
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFF 723
W+ +I+ Y + V L RF
Sbjct: 651 KWVAENIKVYDSYDGCVSDLLRFL 674
>gi|432894997|ref|XP_004076035.1| PREDICTED: Fanconi anemia group J protein homolog [Oryzias latipes]
Length = 1273
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 215/679 (31%), Positives = 337/679 (49%), Gaps = 77/679 (11%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACR 151
++P I + +RTH Q+ Q+ ELK + Y M IL SR+ C++ EV + +N C+
Sbjct: 306 RIPKIFFGTRTHKQITQIAHELKRTVYSSVHMTILSSRDHTCVNPEV--VPHFNRNERCK 363
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNP----HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQ 207
L + + C + V ++ H E D+EDLV + + C Y+ REL
Sbjct: 364 DLLEAKNGKSCRFYHGVQKMRDHHTLQRVHGLHEAWDVEDLVTVAKRLRSCSYYAARELM 423
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
+ I+F PYNYL+DP R+ + ++ IL+ DEAHN+E ++ SF L L C
Sbjct: 424 QGASIIFCPYNYLLDPMIRESMEIDLAGQILVLDEAHNIEDCARESTSFTLDESSLKTCR 483
Query: 268 SEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP---- 323
E + + ++ RR Q LR L I E + E G+
Sbjct: 484 EELDSMVK-NNIRRSQHEP----------LRDFCYALINWIQECQVLLSERGYESASKVW 532
Query: 324 -GPYIYELLADLNITQET----AYKLIDIVE----VAAELLQEDKLQ--NKKSTTACRIE 372
G I + L IT +T L ++E V +ED +Q S T+ ++
Sbjct: 533 SGKDILGIFYGLGITADTFRILKQNLAAVLEKEERVGLVHGKEDMVQVPTISSMTSTVLK 592
Query: 373 SISNILKIIFRDKGTAHSAYYRVHVREA------------DANAADVLKGKASR------ 414
++ +L ++RD + Y+V ++ + DA V R
Sbjct: 593 NLFMVLDFLYRD-NCRFAEDYKVALQRSYSWTNQVPPDVPDAQGFLVRPRPRRRQTARVK 651
Query: 415 ----TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
TLS+WC NP +A + S V SI+LTSGTLSPM SF+ EL + F +++E HVI
Sbjct: 652 TEILTLSFWCLNPAVAFSDLSG-SVRSIVLTSGTLSPMGSFSSELGVKFSIQLEANHVIN 710
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
Q+W G V GP G L +++++ ++ ++ E+G+ +++I +++ G+L F PSY L+D
Sbjct: 711 KSQVWVGTVGAGPQGKKLCATFQHTETYAFQDEVGDLLLHICKVIAKGVLCFLPSYKLLD 770
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKLKDTST-SGAV 587
+ W NT +WE++ + K + EPR + F ++ Y +K GA+
Sbjct: 771 KLRDRWSNTG------LWEKLEQQKTVITEPRGGAKGDFDELLQTYYDAIKCCDERDGAL 824
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
AVCRGKVSEGLDF D RAVV G+PF + D +V LK +Y D +S+G
Sbjct: 825 LIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRG------- 877
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK--SQISLWIQPH 705
L G WY QA RA+NQA+GR IRH++D+GA+I D+R+ + K + +S W++
Sbjct: 878 --LLPGHRWYEIQAYRALNQALGRCIRHKNDWGALILVDDRYGNNPNKYITGLSKWVRQL 935
Query: 706 IQCYSKFGDVVYTLTRFFR 724
+Q + F + + +L F R
Sbjct: 936 VQHHYTFSNAMQSLKAFSR 954
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L + LLESPTG+GK+L LLC+TLAW+++
Sbjct: 8 YTIGGVKIHFPCKAYPSQLSMMNSIVRGLNYGQHCLLESPTGSGKSLALLCSTLAWQRAQ 67
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQ 106
G + + ++SV+ +S D P + R+ S+
Sbjct: 68 FDKIQDGGCIGKKSPPEKTSVDCKKS-DIPTPCLCACHRSTSK 109
>gi|303388455|ref|XP_003072462.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
gi|303301602|gb|ADM11102.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
Length = 678
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 231/732 (31%), Positives = 357/732 (48%), Gaps = 67/732 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M KI G+ +E PFE Y Q+V M K+I L + L+ESPTGTGK+L ++CA L +
Sbjct: 1 MARIKISGVPIEMPFEPYPAQIVTMTKLISCLTTGTSGLVESPTGTGKSLSIICAVLGYS 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ L G++ N S+ ++ + KL I+ SRTH QL Q+I++L+ ++YR
Sbjct: 61 EYL----KRGAKSINVKRREGGSLKGEEAKEEKLKIII-CSRTHKQLDQLIEQLRKTHYR 115
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
P++ IL SR Q CI ++ + + +N C L K G+ R+A +GD
Sbjct: 116 PRISILASRSQYCISPKLGDV--TDKNTGCNELVKSGSCAYFTGKDRLA------KRVGD 167
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
DIE+L GR G CPY+ +R L + +++FAPYNYLID R+ G+ +NS++I
Sbjct: 168 RIFDIEELKGEGRRCGGCPYYASRILNEDAEVIFAPYNYLIDSRIRENTGISLENSVVIV 227
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHN+E +C + S +LSS + +E I R G + L +F L
Sbjct: 228 DEAHNIEDVCRSSGSIELSSRTIEIIQNEILGAI----RRSGMLGEIKL---DFVNLMDF 280
Query: 301 LLKLEKRIAEVPINSKELGF-----TKPGPYIYELLADLNITQETAYKLIDIVEVAAELL 355
KL + AE F + G I + L + IT+E K+ + + A
Sbjct: 281 FRKL-REGAESTDGFDRTTFGGKLRIRKGKEIKDELEKMGITKEFVLKIKN--SIYAIQK 337
Query: 356 QEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
ED +T +E + ++L I + AY V + D N + K S
Sbjct: 338 NEDAKDLLNMSTFHVLEGLDSVLSAI---HFSGCDAYSFVFQKTNDENIRNSRLSKFS-- 392
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
++W + G + F +V SI+L SGTL+P SF+ EL +F + PH++T KQ++
Sbjct: 393 YNFWLLDAGYTFRSFVG-KVRSIVLLSGTLTPFSSFSSELGHDFTHSIVAPHLVTEKQVF 451
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD--GLLIFFPSYYLMDQCI 533
A V G L +Y D+ +Y +L IV+++ V G L+F PSY ++
Sbjct: 452 ASCVRKGHLLKDLTGTYGVSDTPQYLDQLSRIIVDVSNKVKSHGGTLVFVPSYSFLENLQ 511
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD--TSTSGAVFFAV 591
S G L +EP+ E M + K+ + A+F V
Sbjct: 512 KRMGGESSGLL--------------IEPKSGG--GNEFEKVMKRYKNRIATKQRAIFMCV 555
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
RGK SEG+DF D RAV+ G+P+ ++ DP+V LK+E+ D YK
Sbjct: 556 YRGKASEGIDFKDSFARAVIAVGIPYPSLHDPQVELKKEFND--------RYKS-----F 602
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
+G WY QA RAVNQA+GR IRH+ D+G ++ D R++ ++ +S W+ +I+ +
Sbjct: 603 NGRLWYEAQAFRAVNQALGRAIRHKDDWGIVMLLDSRYSEKRVQTHLSKWVTDNIRVHDS 662
Query: 712 FGDVVYTLTRFF 723
+ L+ F
Sbjct: 663 YDTCASELSGFL 674
>gi|334182721|ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191897|gb|AEE30018.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1144
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 237/724 (32%), Positives = 351/724 (48%), Gaps = 115/724 (15%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATLA 58
Y+I G+ VEFP++ Y QL +M +VI +L +ALLESPTGTGK+L LLC+ LA
Sbjct: 27 YQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLA 86
Query: 59 WRKSLGSFSTLGSQVNNQISGSQSSVNSS-QSGDSKLPTILYTSRTHSQLRQVIQELKTS 117
W+KS S G+ +++ S + +S+ + + ++PTI Y SRTH+Q+ QVI+E + +
Sbjct: 87 WQKSYKSRFPNGNLSHSKTQPSDIAGSSNVEPHEPQIPTIYYASRTHAQITQVIREYRKT 146
Query: 118 NYRPKMVILGSREQLCIHREVSLLRGSAQ-NNACRFLCKKGTNRRC---NHHSRVADY-- 171
YR M +LGSR++ C + V +G + CR L K N +C N R+ Y
Sbjct: 147 GYRVPMTVLGSRKRYCTNSHV---QGKENVDEKCRLLLKDKKNIKCAEFNGVGRILAYPS 203
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
++ H G DIEDLV IG+T +T L K+
Sbjct: 204 LQQTGHNGVH--DIEDLVKIGKT-------VTGRLLKS---------------------- 232
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNP 291
F N+E I +A S +L + I + KN ++ S + D
Sbjct: 233 --------FTVHSNMEDIAREAGSINLEEDI----IFKLKNELEQMSEVEPEIYDSL--- 277
Query: 292 DNFAILRALLLKLEKRIAEVPINSKELGFTK-PGPYIYELLADLNITQETAYKLIDIVEV 350
+ ++ L+ + ++ + + F+ G + L + NIT+E L
Sbjct: 278 --YEVVEGLISWIGRKKDSLAKRDVDHYFSNWTGDRALKELKEFNITRENFPNLKACFNQ 335
Query: 351 AAELLQEDKLQNKK----STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAAD 406
A + ++ K + +E + L F G +H Y + ++ + A D
Sbjct: 336 AITKSEAAEIDPDKPYLSGISVSTLEELFATLTYFFSRNG-SHVLDYEMGLQRS-AKRGD 393
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
+ T S WC NP + ++ + L + SIILTSGTLSPM+SF+ EL + F +E P
Sbjct: 394 ---NGWTNTFSLWCMNPSVVFKDLADLSL-SIILTSGTLSPMNSFSSELGMQFGTCLEAP 449
Query: 467 HVIT-SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
HVI + Q+WAG + P Y LN+SYR ++ ++ LG ++ I IVP G L+FFPS
Sbjct: 450 HVIDPNMQVWAGAISTVPGNYPLNASYRTAEAYAFQDALGKSLEEICTIVPGGSLVFFPS 509
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDY--------- 574
Y LM++ W T W R+C +EPR S F +++Y
Sbjct: 510 YKLMEKLCTRWHETGQ------WSRLCLKTDLFIEPRGGSKDDFETVLKEYYDSISGKNR 563
Query: 575 --------------MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
+ + +D S G+ F AVCRGKVSEG+DF+D RAV+I G+P +
Sbjct: 564 LIGRNSSVKKAGSVITEAQDDSKRGSAFLAVCRGKVSEGMDFSDDNARAVIIVGIPLPNL 623
Query: 621 TDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
D V LKR+Y D S+ + L G +WY QQA RA+NQA GR IRHR DYG
Sbjct: 624 GDILVELKRKYNDTNKSSK---------NLLGGSEWYCQQAYRALNQAAGRCIRHRFDYG 674
Query: 681 AIIF 684
AIIF
Sbjct: 675 AIIF 678
>gi|428173640|gb|EKX42541.1| hypothetical protein GUITHDRAFT_111516 [Guillardia theta CCMP2712]
Length = 1115
Score = 328 bits (841), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 236/788 (29%), Positives = 372/788 (47%), Gaps = 104/788 (13%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
IRG +V FP Y QL M+K I +L+N+ N LLE PTG+GK+L LLCA AW ++
Sbjct: 15 IRGCEVNFPHTPYSSQLAMMDKTIFALRNEKNVLLELPTGSGKSLSLLCAVSAWLQAAER 74
Query: 66 FSTLGSQ--------------------------------------VNNQISGSQSSVNSS 87
Q V G++ VN
Sbjct: 75 EQQQQGQLRPEGDNDLNGLHGMDPMHDDDDDMDEDEDEDEDEDEDVGGAAGGNEGDVNDV 134
Query: 88 QSGD---------SKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREV 138
+ D + P I + SRTHSQ+ Q+++EL+ + Y P++ +LGSRE CI+ V
Sbjct: 135 RQEDKDRKARRKSRRSPKIYFASRTHSQIAQLVRELRKTKYSPRICVLGSREHYCINPRV 194
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPC 198
+ + C+ K+ + + R+ ++ PH DIE + G C
Sbjct: 195 -MASEKPKGEECKAKLKENSCSFYHGVQRLENHKDLQPHGKLRLHDIEGRDRPPKVHG-C 252
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
PYF R L K +++F PYNYL++P R +GVE + + +I DEAHN+E +C +AAS +L
Sbjct: 253 PYFAARSLAKRANVIFCPYNYLVEPAIRDAMGVELEGNTVIIDEAHNIEDVCREAASLEL 312
Query: 259 SSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL 318
L + + R+ + + N+ +L A++ L + E N +
Sbjct: 313 KHEDL------------VETNRQWEEMQFAEDAHNYMLLDAVVRNLASYMKEQSQNLIQQ 360
Query: 319 GF-----TKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTAC---- 369
+ G ++ + I +ET L ++ A + L E + Q ++ ++
Sbjct: 361 NHLYSYKIQSGFIATDVFRNAGINEETLKPLNSFLQKAIKKLDEVENQREEESSPLPPAK 420
Query: 370 ---RIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIA 426
++ I + +++F++ A + RE + + K ++S WC NP +A
Sbjct: 421 SLKLVQDIFSKAQLLFQNPFDYRLAIEQRTTRE-ERGGRRPGQAKLELSMSLWCLNPAVA 479
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSG 485
+ S + ++ILTSGTLSP+ SFA EL F + + PHVI TSKQ++ G V P
Sbjct: 480 FKAVSS-QTRAVILTSGTLSPITSFATELGTTFHMTYQAPHVIDTSKQVFVGSVCSVPGN 538
Query: 486 YL--LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
L LN SY+++DS+ Y+ LG ++ + +I+P G+L FFPSY L+++ + W T
Sbjct: 539 PLLKLNGSYKHQDSVIYQDNLGAAVLELCKIIPFGVLCFFPSYGLLEKVKSRWMATGQ-- 596
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
+E+I + K +VEPR F A+E Y + + A K + F
Sbjct: 597 ----YEKIDEVKDIIVEPRTGEDFDRAMESYYDAIARSKGEAAPKAT----KKAASKSFF 648
Query: 604 DHAGRAV-----VITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
AG+ V TG F + KV++K+ Y D + L+G++WY+
Sbjct: 649 KKAGQKVPTPGKAKTGAVFLAVCRGKVKVKKTYNDNKVGD----------GLLNGDEWYS 698
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR-KSQISLWIQPHIQCYSKFGDVVY 717
QA RA+NQAVGR IRH +DYG+IIF DER+ S KS +S W++ + Y F D
Sbjct: 699 LQAFRAINQAVGRCIRHVNDYGSIIFLDERYQQKSSIKSNLSKWVRECLVDYKTFEDCAG 758
Query: 718 TLTRFFRE 725
L FF +
Sbjct: 759 RLGGFFSQ 766
>gi|401825484|ref|XP_003886837.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
gi|392997993|gb|AFM97856.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
Length = 678
Score = 328 bits (841), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 227/735 (30%), Positives = 356/735 (48%), Gaps = 73/735 (9%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M KI G+ ++ PFE Y Q+V M K+I L + L+ESPTGTGK+L +LCA L +
Sbjct: 1 MVRIKISGVPIDMPFEPYPAQIVTMTKLISCLMTGTSGLVESPTGTGKSLSILCAVLGYN 60
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ L G + G Q ++ + KL I+ SRTH QL Q+I +L+ + YR
Sbjct: 61 EHLKK-GIGGCSAKRREGGGQ---KGEEAKEEKLKIII-CSRTHKQLDQLIDQLRKTQYR 115
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
P++ IL SR Q CI ++ + + +N C L K G+ R+A +GD
Sbjct: 116 PRISILASRSQYCISPKLGDV--ADKNTGCNELVKSGSCAYFTGKDRLA------KRVGD 167
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
DIE+L GR G CPY+ +R L + +++FAPYNYLIDP R G+ +NS++I
Sbjct: 168 RIFDIEELKGEGRRCGGCPYYASRILNEDAEVIFAPYNYLIDPRIRGNTGISLENSVVIV 227
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHN+E +C + S +L S I +N I + R G + L+ N
Sbjct: 228 DEAHNIEDVCRSSGSIELGS----RTIEIIQNEILGAVKRSGILGEVKLDFIN------- 276
Query: 301 LLKLEKRIAEVPINSKELG--------FTKPGPYIYELLADLNITQETAYKLIDIVEVAA 352
L+ K++ E ++ E + G I + L + I +E K+ + +
Sbjct: 277 LMDFFKKLREGAESTDEFDRDTFGGKLRIRKGRDIKDELERMGIGKEFVLKIKNSIYAIQ 336
Query: 353 ELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKA 412
+ + L N +T +E + ++L I + AY V + +D N + K
Sbjct: 337 KNEEAKDLLN--VSTFHILEGLDSVLSAIHF---SGCDAYSFVFHKVSDENIRNSRSSKF 391
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
S ++W + G + F +V S++L SGTL+P SF+ EL F + PH+IT K
Sbjct: 392 S--YNFWLLDAGYTFRSFVG-KVRSVVLLSGTLTPFSSFSSELGHEFAHSIVAPHLITQK 448
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP--DGLLIFFPSYYLMD 530
Q++ + G L +Y D+ +Y +L IV+++ + G L+F PSY ++
Sbjct: 449 QVFVSCIKKGHLARELTGTYGVSDTPQYLDQLLRIIVDVSNKIKGHGGTLVFVPSYSFLE 508
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD--TSTSGAVF 588
+ G L +EP+ + E M + K+ + A+F
Sbjct: 509 NLQKRMGGGASGIL--------------IEPKSGA--GNEFEKVMKRYKNRIATKQSAIF 552
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKL 648
V RGK SEG+DF D RAV+ G+P+ ++ DP+V LK+E+ D YK
Sbjct: 553 MCVYRGKASEGIDFKDSFARAVIAVGIPYPSLHDPQVELKKEFND--------RYKS--- 601
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
+G WY QA RAVNQA+GR IRH+ D+G ++ D R++ +S +S W+ +I+
Sbjct: 602 --FNGRLWYEAQAFRAVNQALGRAIRHKDDWGVVMLLDNRYSEKRVQSHLSKWVTENIRV 659
Query: 709 YSKFGDVVYTLTRFF 723
Y + V L+ F
Sbjct: 660 YDSYDGCVSELSGFL 674
>gi|321476840|gb|EFX87800.1| hypothetical protein DAPPUDRAFT_311920 [Daphnia pulex]
Length = 824
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 332/657 (50%), Gaps = 82/657 (12%)
Query: 92 SKLPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQNNAC 150
S++P I + +RTH Q+ QV++E + + Y M +L SRE CIH EVS
Sbjct: 57 SRIPKIFFGTRTHKQITQVVKEFRRTVYCNTPMGVLASREHTCIHPEVS----------- 105
Query: 151 RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP-IDIEDLVNIGRTFGPCPYFMTRELQKT 209
R N KN + P +DIEDLV++GR CPY+ +R++ +
Sbjct: 106 ---------RSAN---------KNEDQIFTSPLLDIEDLVSLGRRIRVCPYYASRDMSEQ 147
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
IVF+PYNYLIDP R+ + + ++I+I DEAHN+E ++A S +++
Sbjct: 148 AQIVFSPYNYLIDPRVRQSMKIPINDNIIILDEAHNIEDSARESAGGSWSQEDFRLALND 207
Query: 270 AKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYI-- 327
C I + R + ++ + D A + +++ I + N K +GF + +
Sbjct: 208 ---CEKIGN--RHPTMEKEI--DRLAKFSSYMMQW---IGKHATNMKSVGFDREVHVMTG 257
Query: 328 YELLADLNITQETAYKLIDIVEVAAELLQE-------DKLQNK----KSTTACRIESISN 376
E +A+L++ L+++ + + E DK ++ T +E
Sbjct: 258 TEFVANLSVDGYGPEMLVELKAIIDYIFNEQLESDWNDKEGSQDPQLSGATQTLLEGFLM 317
Query: 377 ILKIIFRDKGTAHSAYYRVHVREAD----ANAADVLKGKASRTLSW------WCFNPGIA 426
I+ ++ Y V VR + GKA+ W WC N +
Sbjct: 318 IMDLMLNGNQIHRDDYRAVVVRTVERKQKKGPGSSFFGKANIASQWTYALNLWCLNSAVV 377
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
M E SII+TSGTLSP+ S+ EL ++F L +E HVI +K++W G + GP
Sbjct: 378 MHEIKE-STRSIIVTSGTLSPLASYQSELDIDFKLTLEANHVIPAKRVWIGTISQGPRNT 436
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
LLN +++ + EY+ ELG +++ + +P G+L F PSY L+++ + W++T
Sbjct: 437 LLNGTFKVTGTFEYQDELGRLALSVCQTIPHGVLCFLPSYSLLEKLVTRWQDTG------ 490
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+W+ + +K V E R S F ++ + + ++D S +GA+ AVCRGKVSEGLDF D+
Sbjct: 491 LWQHLSNYKTIVCESRDSRDFEETLKSFYSAIED-SVNGALMLAVCRGKVSEGLDFTDNN 549
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
RAV+ G+PF D +V LKR+Y D + S L+G +WY QA RA+N
Sbjct: 550 ARAVICVGIPFPNFKDTQVELKRQYNDKLSAST---------PLLNGSEWYEIQAFRALN 600
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAH-PSRKSQISLWIQPHIQCYSKFGDVVYTLTRF 722
QA+GR IRH+ D+GAI+ D+RFA P +Q+S W++ I+ + F ++ +L F
Sbjct: 601 QALGRCIRHKADWGAILLVDDRFAKTPRYVNQLSKWVRSSIRHFHCFPPMLNSLKEF 657
>gi|196012030|ref|XP_002115878.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
gi|190581654|gb|EDV21730.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
Length = 995
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 222/689 (32%), Positives = 346/689 (50%), Gaps = 107/689 (15%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRF 152
+P I + +RTH Q+ Q+I+ELK + YR KM IL SR+ CIH ++S + S++N+ CR
Sbjct: 248 VPKIFFGTRTHKQIAQIIRELKKTAYRNVKMTILSSRDFTCIHPKIS--KSSSKNDDCRL 305
Query: 153 LCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGRTFGPCPYFMTRELQK 208
+ G+ C +H V +K++ L I DIE+ V + CPY+ R L
Sbjct: 306 AIEVGS---CVYHHNVPR-LKSHQALEARGINSAWDIEEFVQVCNKSKACPYYAARGLID 361
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
+I+F PYNYLI+ R + + +N I+I DEAHN+E +A SF++++ L I
Sbjct: 362 QSEIIFCPYNYLIESSIRDLMDITLRNQIVILDEAHNIEDSAREATSFEITALTLKEMID 421
Query: 269 EAKNCI--DISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGF------ 320
+ I DI + G + A+ KL I + + K GF
Sbjct: 422 DLNFLIERDILTGHHGP-------------IHAMCHKLWLWINDESHSLKNTGFEQASKV 468
Query: 321 ------------------TKPGPYIYELLADLNIT------------------QETAYKL 344
T P +Y LN+T +T L
Sbjct: 469 WSAIEILAIFERMDISVETYPTIQVYRYNKGLNLTVMHIPILRIETGVVLAASGKTLLYL 528
Query: 345 IDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANA 404
++ V LL+ DK K T ++ +L+II +YR+ + ++ N
Sbjct: 529 KGMMLVFGYLLRTDK----KYCTDYKL-----MLQIIQSLIFGYMIIFYRITLVKSVVNI 579
Query: 405 -ADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
+ + + + +L++WC NP +A + S+ILTSGTLSPM+SF+ EL L F +R+
Sbjct: 580 PVEATRKQWTYSLNFWCMNPAVAFDDIGP-AAHSVILTSGTLSPMNSFSSELGLAFSIRL 638
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
E H+I Q + G +G LN+SYR+ ++ ++ ELGN I+ RI+P G+L FF
Sbjct: 639 EAAHIINYSQALVATLSEGINGVSLNASYRSAETFAFQDELGNIILEACRIIPGGILCFF 698
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST 583
PSY L+D+ + W+NT W + K + EPR + +D + K D+ T
Sbjct: 699 PSYNLLDKVVKRWQNTD------TWNSLNAVKIVIAEPRGGN--KSDFDDLLQKFYDSVT 750
Query: 584 --------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD-L 634
SG +F AVCRGKVSEGLDFAD RAV+ G+P+ + D K+ LK++Y D
Sbjct: 751 ALNMMSGPSGGLFLAVCRGKVSEGLDFADDNARAVITVGIPYPNIKDLKIELKKKYNDKF 810
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
AQ + L+G++WY QA RA+NQA+GR IR+R+D+GA++ D+RF ++
Sbjct: 811 SAQR----------NLLTGKEWYEIQAYRALNQALGRCIRNRNDWGALLLLDDRFGKSTK 860
Query: 695 KSQ-ISLWIQPHIQCYSKFGDVVYTLTRF 722
+ ++ W++ +Q +S D + TL+ F
Sbjct: 861 YTAGLAKWVRQRVQHFSLASDTLATLSSF 889
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+Y I G+ VEFP++AY QL M K+IQ LQ + + LLESPTG+GK+L LLC+ LAW+
Sbjct: 19 SYTISGVQVEFPYKAYPSQLSMMSKIIQGLQQRKHCLLESPTGSGKSLALLCSALAWQ 76
>gi|326931537|ref|XP_003211885.1| PREDICTED: Fanconi anemia group J protein homolog [Meleagris
gallopavo]
Length = 1257
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 214/675 (31%), Positives = 338/675 (50%), Gaps = 78/675 (11%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRF 152
+P I + +RTH Q+ Q+ +ELK + Y M IL SR+ CIH VS + +N C
Sbjct: 253 IPKIFFGTRTHKQIAQITRELKRTAYSGVSMTILSSRDYTCIHPVVSSSSSN-RNELCVE 311
Query: 153 LCKKGTNRRCNH----HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQK 208
L + + C + H Y ++ H + DIEDLV++G+ CPYF REL
Sbjct: 312 LLEGKHGKSCLYYHGVHKLTEHYALHSAHNTYQAWDIEDLVSLGKKLRACPYFAARELMV 371
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
DIVF PYNYL+DP R+ + + K ++I DEAHN+E +A S+ ++ L A
Sbjct: 372 GADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDSAREAVSYSVTESQLNAARE 431
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP----- 323
E ++ + + LRA+ L + E G+
Sbjct: 432 ELDFMVN-----------NNIRQKDHEHLRAVCYSLTNWLRASSSQLVETGYETSCKVWS 480
Query: 324 GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN-----------KKSTTACRIE 372
G + ++ IT ++ ++ ++A L +E+K+ S T ++
Sbjct: 481 GKEMLNHFHEMGITN-ISFPILQ-KHLSAVLEKEEKISMFGKEELVEIPIVSSATQIVLK 538
Query: 373 SISNILKIIFRDKGTAHSAYYRVHVREADA----NAADV-------LKGKASRTL----- 416
+ +L +F+D + + YRV +++ A N DV K K R L
Sbjct: 539 GLFMVLLYLFKD-NSRFADDYRVALQQTYAWTNENQPDVSDTSAFLTKTKHKRNLRHKTV 597
Query: 417 ----SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
++WC NP +A + + +V +I+LTSGTLSPMDSF+ EL + F +++E HVI +
Sbjct: 598 VHMLNFWCLNPAVAFSDLN--DVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNS 655
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
Q+W G + GP+G L +++++ ++ E++ E+G ++++ + V G+L F PSY L+D+
Sbjct: 656 QVWVGTIGAGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKL 715
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-DTSTSGAVFF 589
W +T +W + K + EP+ S F ++ Y +K GA+
Sbjct: 716 KDRWMHTG------LWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKFKGGKDGALLI 769
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
AVCRGKVSEGLDF D RAV+ G+PF + D +V LKR+Y D ++G
Sbjct: 770 AVCRGKVSEGLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKTTRG--------- 820
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK--SQISLWIQPHIQ 707
L G WY QA RA+NQA+GR IRHR D+GA+I D+RF + K + +S WI+ +Q
Sbjct: 821 LLPGSQWYEIQAYRALNQALGRCIRHRSDWGALILVDDRFRNNPNKYITGLSKWIRQQVQ 880
Query: 708 CYSKFGDVVYTLTRF 722
+ FG + +L F
Sbjct: 881 HHENFGSALESLHAF 895
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L N + LLESPTG+GK+L LLC+ L+W+++L
Sbjct: 8 YTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNGQHCLLESPTGSGKSLALLCSALSWQQAL 67
>gi|42601324|gb|AAS21351.1| helicase-like protein NHL-like protein [Oikopleura dioica]
Length = 1016
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 235/774 (30%), Positives = 372/774 (48%), Gaps = 129/774 (16%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
T G+DV FP++ Y Q Y++K +++L + +A+LESPTGTGKTLCLL + +A+R+
Sbjct: 6 TLNFYGVDVRFPYDPYPAQEEYIKKCVEALVKRNHAVLESPTGTGKTLCLLASVIAYREW 65
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK----TSN 118
+ N+ GS G +P I+Y SRTHSQL QV+ EL+
Sbjct: 66 AKR-----NPPKNKYGGSL--------GTESIPKIIYASRTHSQLTQVVSELRKLRDVCG 112
Query: 119 YRPKMVILGSREQLCIHREVS-LLRGSAQNNACRFLCKKGTNRRCNH-----------HS 166
Y M ++G R LC+ V + S Q NACR L T C H HS
Sbjct: 113 YNVDMTVVGGRSSLCVDLTVKKITNNSEQQNACRALRNGKTG--CAHKKEADKLSGIAHS 170
Query: 167 RVADYM---------------KNNPHL---------------------GDEPIDIEDLVN 190
R + KN P L + +DIE+LV+
Sbjct: 171 RPSTSTAPKSQPSKSLPFGSPKNAPDLLKAAQEEAKRKQNQELISSSGVHDIMDIEELVS 230
Query: 191 IGRTFGP---------CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFD 241
P C Y+++R TV+I+ PYNY++D R+ E+KN ILI D
Sbjct: 231 WCENPPPQIPDCSTAICGYYLSRSKADTVEILLMPYNYILDKKIRQRNSFEFKNKILILD 290
Query: 242 EAHNLEGICADAASFDLSSGLLTACISE-AKNCIDISSTRRGQSSDETLNPDNFAI---- 296
EAHN+E +C +++S +S L E A + +++ R+ S+D NP++F
Sbjct: 291 EAHNVEQVCEESSSHYISLKKLEIISKELAMSKASVTNPRKTNSNDP--NPESFKTYEID 348
Query: 297 -----LRALLLKLEKRI-AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEV 350
+ R+ EV K+ K +I +L+A N+ Q + + +
Sbjct: 349 EFIKNFDDFHFHFQNRVFDEVAEKGKDGMEYKVSEFIQQLIA-TNMFQTNSLRWAGLASQ 407
Query: 351 AAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHS-AYYRVHVREADANAADVLK 409
+D+ ++ + +E + +++ + R + H YR+ + + + ++AD+
Sbjct: 408 VIGHFAKDRGRSG-GLSGTFLEEFAFMMEDMHRLRKNKHEYENYRIQICQDENDSADM-- 464
Query: 410 GKASRTLSWWCFNPGIAMQEFSRLEVG--SIILTSGTLSPMDSFAQELKLNFPLRVE--- 464
+ WCFN ++ + ++ G ++ILTSGTLSP+D + L L+ P +++
Sbjct: 465 -----EIKIWCFNASYSIDDITQGAEGVYNLILTSGTLSPLDEYINSLGLDRPTQLKTIQ 519
Query: 465 --NPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
N HVI SKQ++ + G G ++ +RNR ++ + ++ + P G+L+F
Sbjct: 520 LMNDHVIDSKQLFVTTL-TGTKGAEFHNVFRNRQDKNMFEKYAEVMRDMKEVSPGGMLVF 578
Query: 523 FPSYYLMDQCIACW----KNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAK 577
P+Y LM W K+ + N + PV +EP E + +
Sbjct: 579 HPTYALMAISKKFWGLHKKSATFKNSFNV---------PVFLEPSNKKELENMTESFERE 629
Query: 578 LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
L + +GA+F VCRGK+SEG+DFAD GR VVITG+P+ DPKV LK+EYLD +
Sbjct: 630 LVNDEETGAIFNGVCRGKMSEGVDFADCRGRVVVITGIPYPPAKDPKVMLKKEYLDNR-- 687
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAH 691
K+T + G WY +A RA+NQAVGR+IRH++D+GAII+ D+RF +
Sbjct: 688 ------KKTGKGIIDGNKWYGIEAIRAINQAVGRIIRHKNDFGAIIYMDKRFVN 735
>gi|145345288|ref|XP_001417148.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577375|gb|ABO95441.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 938
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 225/754 (29%), Positives = 370/754 (49%), Gaps = 81/754 (10%)
Query: 3 TYKIRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
T I G V+FP + Q + M +I++L + +A++ESPTGTGKTL LLC LAW+
Sbjct: 124 TKAIGGCKVKFPEGLNPHPAQTMTMSSIIRALTKREHAMIESPTGTGKTLALLCGALAWQ 183
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSG-DSKLPTILYTSRTHSQLRQVIQELKTSNY 119
+ + S + G S Q+ ++ I SRTHSQ+ Q+++ELK + Y
Sbjct: 184 EREVALSM------EKNKGYWSEKMKYQTARNAYKDAIFICSRTHSQINQILRELKRTGY 237
Query: 120 RPKMVILGSREQLCIHREVS------LLRGSAQNN---ACRFLCKKGTNRRCNHHSRVAD 170
P+ +L SR+++C + L G AQ + AC F N H V+
Sbjct: 238 SPRYSVLSSRQRMCPMEKNDAQCKELLGTGVAQQSGRTACGFF---------NRHKHVSS 288
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
M+ P G+E + D+ED + C ++ RE+ KT D++F PYNYL D
Sbjct: 289 NMERYPKAGEEGMFPSAWDMEDFERVVNEIEGCSFYALREMVKTADLIFCPYNYLFDVNI 348
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSS 285
R+ + ++ K++ +I DE HNLE +C + +S + S + K ++S T ++
Sbjct: 349 RRKMKIDLKDAAVIIDEGHNLEDVCREGSSIEFSLDTI------GKGMDELSKTWGKINN 402
Query: 286 DETLNPDNFAILRALLLKL--EKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYK 343
+ +L F + A + L I S +L + ++ ++L N E
Sbjct: 403 ETSLIARFFRAISAFMEGLFCTNTAPTTVIQSNQLEY-----FVNDMLKTFNAVGEYTQD 457
Query: 344 LIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADAN 403
+ID+VE +LL ED A I ++ +++ H+A Y + +
Sbjct: 458 IIDVVE---KLLTEDS-NLMSPIIAPHITFAGDLAEVL--QNAVKHAAAYNIFI-----G 506
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
+ + G + C P +A + + S+I+TSGTLSPM++F EL FP ++
Sbjct: 507 SRVEIDGDECPGMVIQCMKPSVAFHAVAE-KARSVIITSGTLSPMNTFEAELAEKFPTKI 565
Query: 464 ENPHVITSKQIWAGIV-PVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
E PHV+ + ++ + +G Y + ++ ++LG ++ A+++P G+L+F
Sbjct: 566 EAPHVVPNDHVYVEVTSAIGEVTYKATDGHVQ--GPKFAKKLGEYLLKYAQVIPGGMLVF 623
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS 582
P Y L+D+ + W ++T ++ ++ +K+ VVE R + F + ++ L +T+
Sbjct: 624 LPKYSLIDRVLREW------HVTGLFGKMNDYKRVVVETRGARGFQDTLNEF--NLGNTN 675
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ-AQSQGG 641
G++ AV RGKVSEG+DF D + RAV G+PF ++ D KV+ K+E+ DL +++QG
Sbjct: 676 GKGSLMLAVYRGKVSEGIDFKDDSARAVFCVGIPFPSVYDIKVKAKKEFNDLPVSRAQG- 734
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR--KSQIS 699
LSG +WY QA RA NQA+GR IRH DY A+ D RF SR + IS
Sbjct: 735 --------MLSGGEWYRAQAYRAYNQALGRCIRHPKDYAALFLVDSRF-RESRWMLNNIS 785
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFFREERICGSTN 733
WI+ + Q V + FF+ R N
Sbjct: 786 KWIRNNAQASDDVNQSVRVVDGFFKRLRGASDGN 819
>gi|300707205|ref|XP_002995821.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
gi|239605041|gb|EEQ82150.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
Length = 695
Score = 325 bits (834), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 222/748 (29%), Positives = 360/748 (48%), Gaps = 78/748 (10%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M KI+GI V+FP+E Y+ Q MEK++ + ++ESPTGTGK+L +LCA LA++
Sbjct: 1 MTKIKIKGISVDFPYEPYESQKQTMEKILTCMMEGSTGMIESPTGTGKSLSILCAVLAYK 60
Query: 61 KSLGSFS-----------------TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRT 103
+ + + + S +N ++ +Q + D K I SRT
Sbjct: 61 EHIKRNNIPLHKPPKKPLLDAVDESKQSDINELLNATQEK--AENDNDFK---IFICSRT 115
Query: 104 HSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCN 163
H QL Q++Q+L + Y+P++ IL SR Q CIH ++ + A +AC KK N
Sbjct: 116 HKQLDQLVQQLNKTRYKPRISILASRNQYCIHPKLQNVTDKA--SACSEYIKKNQCNYVN 173
Query: 164 HHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
R+A +G DIE++V G+ G CPYF R+L DI+FAPYNYL+D
Sbjct: 174 GKDRLA------KRVGQNIFDIEEIVREGKRCGGCPYFAARKLADDADIIFAPYNYLLDR 227
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ 283
R +E NSI+I DEAHN++ +C + S +L+S ++ ++E N + S G+
Sbjct: 228 NVRGNTAIELSNSIIIIDEAHNIDDVCRSSGSIELTSNIIDIIVNELLNAVK-KSAYLGE 286
Query: 284 SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYK 343
+ + L + R L+ +EK + N + G I L ++ IT E +
Sbjct: 287 TKGDYLIL--LELFRKLVFNVEKVTSFDKTNKNVKLRIRKGKNIKNELIEMTITCEFMTQ 344
Query: 344 LIDIVEVAAELLQEDKLQNKKSTTACRIESISNILK-IIFRDKGTAHSAYYRVHVREADA 402
+ + E +Q+ K ST IE++ +IL ++F D A+ + E D
Sbjct: 345 FKNAI-YGIEQVQDGKSLVSVSTWHI-IETLDSILSPLLFSDCDVYSYAFNKC---END- 398
Query: 403 NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
+G+ + ++W + F + +V ++IL SGTL+P SF+ EL F +
Sbjct: 399 -----FQGRTFFSYNFWLMDGAYVFSPFVK-QVKALILLSGTLTPFVSFSSELGHKFAHQ 452
Query: 463 VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIV--PDGLL 520
+ PH+I KQ+ + G L +Y+ +S+ Y ++ + + A V G L
Sbjct: 453 ISAPHLINDKQVLVTCLKRGHLKQELIGTYKIAESLAYLDQIARVVYDTAYKVHGHGGTL 512
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKL 578
+F PSY +D A K NL EP+ + F ++ Y ++
Sbjct: 513 VFVPSYTFLDNLHARIKLLRLDNL-------------FCEPKAGGINEFESILKKYHNRI 559
Query: 579 KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
+ V V RGK SEG+DF D + RAV+ G+P+ ++ DP++ LK+E+ D
Sbjct: 560 NEKKP--VVLLCVYRGKASEGIDFKDSSARAVICVGIPYPSLVDPQIELKKEFND----- 612
Query: 639 QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
K +G WY QA RAVNQAVGR IRH+ D+G II D R++ Q+
Sbjct: 613 --------KHKHFNGRRWYETQALRAVNQAVGRAIRHKDDWGIIIMLDSRYSDKRVSVQL 664
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREE 726
S W+ ++ ++ + + ++ F ++
Sbjct: 665 SGWVSQFLKVHNDYESCIKSINLFLSDK 692
>gi|301094332|ref|XP_002896272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109667|gb|EEY67719.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 988
Score = 325 bits (834), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 226/733 (30%), Positives = 356/733 (48%), Gaps = 102/733 (13%)
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKL--PTILYTSRTHSQLRQVIQELKT------ 116
SF+ + ++ Q V Q ++ P I + SRTHSQL QV+ ELK
Sbjct: 198 SFAFAAKDADVKVKAEQLDVAPDQPKKKRVVPPQIFFCSRTHSQLAQVVDELKNCPVSYL 257
Query: 117 -----SNYRPKMV---ILGSREQLCIHREVSLLRGSAQ-NNACRFLCKKGTNRRCNHHSR 167
SN K + +LGS+ +C++R+V+ R +Q + CR + + +
Sbjct: 258 DSPEDSNTYTKQLQTCVLGSKRNMCVNRKVN--RDPSQVDEKCRLALEGSSCSFFRKRKK 315
Query: 168 VADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
D ++ P P+ DIEDLV + + C YF RE +IVFAPYNYL+DP R
Sbjct: 316 TNDLKRSVP-----PVWDIEDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPTIR 370
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD 286
+G+ K++I++ DEAHN+E C +AS ++++ L A I I I R
Sbjct: 371 GAVGITLKDAIIVLDEAHNVEDTCRSSASVEVTTDALAASIKAF--TIVIKHGNR----- 423
Query: 287 ETLNPDNFAILRALLLKLEKRIAEVPINSKEL----GFTKP-----GPYIYELLADLN-I 336
P + L LL + + + V N+ + G+ + G +LA+ + +
Sbjct: 424 ----PKTYNALLKLLNGINRWLQSVDSNANAILQPSGYEEKSKVWDGADALAMLAEYSGL 479
Query: 337 TQETAYKLIDIVEV----------AAELLQEDKLQNKKSTTA--------------CRIE 372
T++ ++ + V+ +AE Q+ Q + A +E
Sbjct: 480 TKDNLEEMKENVQEVREYENGLGNSAESSQQPPTQAAQDAAANPTGASVLLGALALATVE 539
Query: 373 SISNILKIIFRDKGTAHSAYYRVHVREADA---NAADVLKGKASRTLSW------WCFNP 423
SI N++ +FRD+ + V ++ NA+ K + W WC N
Sbjct: 540 SIMNVVDYMFRDRLKFIEDFKLVVIKSKSTWKENASFRSPTKRNGGDEWELKMCIWCLNA 599
Query: 424 GIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT-SKQIWAGIVPVG 482
+A + + + S+ILTSGTLSPM+SFA EL ++FP+R+E HV+ KQ++ G V G
Sbjct: 600 AVAFSDIAS-QARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVNMRKQVFIGAVMHG 658
Query: 483 PSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHG 542
P L S+Y N+ Y+ +G ++ ++ +P G+L+FFPSY L+++ WK T
Sbjct: 659 PGNVDLQSTYNNQQDPRYQDSMGQLLLQYSQAIPGGILMFFPSYSLLNKLTTRWKKTK-- 716
Query: 543 NLTTIWERICKHKKPVVEPRQSSL-FPLAIEDYMAKL------KDTSTSGAVFFAVCRGK 595
+W I + K EPR + F +EDY + D + +GAVF AV RGK
Sbjct: 717 ----LWGEIEQFKAIYSEPRNAGKDFDRLLEDYKETITCSKDGDDGNKTGAVFLAVYRGK 772
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGED 655
VSEG+DF++ RAV+ G+PF ++ + +V LKR+Y D E + ++G
Sbjct: 773 VSEGIDFSNDNARAVLCVGIPFPSVKELQVSLKRKYQD--------EKSRMNMKLVNGHI 824
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDV 715
WYN QA RA+NQA+GR IRHR DYGAI+ D R +S W++P+IQ +
Sbjct: 825 WYNLQAFRALNQALGRCIRHRQDYGAIMLLDSRHRFNKHTKSLSKWMRPYIQEFEHSQMC 884
Query: 716 VYTLTRFFREERI 728
V + FF+ ++
Sbjct: 885 VPMFSDFFQRNKM 897
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 4 YKIRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
+ I G +VEFP + Q M KV+ +L+ + +ALLESPTG+GKTL LLC++L ++K
Sbjct: 9 FMIMGYNVEFPQGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQK 68
Query: 62 SL 63
Sbjct: 69 QF 70
>gi|402899850|ref|XP_003912899.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Papio anubis]
Length = 1248
Score = 325 bits (833), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 216/715 (30%), Positives = 368/715 (51%), Gaps = 73/715 (10%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREV 138
S +++ +G SK+P I + +RTH Q+ Q+ +EL+ + Y R M IL SR+ C+H EV
Sbjct: 229 SSNTIKKDHAGKSKIPKIYFGTRTHKQIAQITRELRRTAYSRVPMTILSSRDHTCVHPEV 288
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+LV++G+
Sbjct: 289 --VGNFNRNEKCMELLDGRNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKK 346
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 347 LKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESA 406
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA----- 309
S+ ++ L E + ++ + R+ E L ++++ L E +
Sbjct: 407 SYSITEVQLRFARDELDSMVNNNIRRKDH---EPLRAVCYSLINWLEANSEYLVERDYES 463
Query: 310 --------EVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQ 361
E+ +N ++G T I + + +E I E A E+
Sbjct: 464 ACKIWSGNEMLLNLHKMGITTATFPILQGHFSAVLQKEEKISPIYGKEEAREV------P 517
Query: 362 NKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADVL--- 408
++T ++ + +L +FR + + + Y++ +++ +D N +L
Sbjct: 518 IISASTQIMLKGLFMVLDYLFR-QNSRFADDYKIAIQQTYSWTNQIDISDKNGLLILPKN 576
Query: 409 -----KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
+ A R L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F +++
Sbjct: 577 KKHSRQKTAVRVLNFWCLNPAVAFSDING-KVQTIVLTSGTLSPMKSFSSELGVTFTVQL 635
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
E HVI + Q+W G + GP G L ++++N ++ E++ E+G ++++ + V G+L F
Sbjct: 636 EANHVIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCFL 695
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-D 580
PSY L+++ W +T +W + K +VEP+ + + F ++ Y +K
Sbjct: 696 PSYKLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKYK 749
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
GA+ AVCRGKVSEGLDF+D RAVV G+PF + D +V LKR Y D ++ +G
Sbjct: 750 GEKDGALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVELKRRYNDHHSKLRG 809
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQI 698
L G WY QA RA+NQA+GR IRH++D+GA+I D+RF +PSR S +
Sbjct: 810 ---------LLPGRQWYEIQAYRALNQALGRCIRHQNDWGALILVDDRFRNNPSRYISGL 860
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLK----LIKTEVSGDVRELK 749
S W++ IQ +S F + +L F ++ + + ++K + TE + +V LK
Sbjct: 861 SKWVRQQIQHHSTFESALESLAEFSKKHQKVLNVSIKDRTNVQDTESTLEVSSLK 915
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|429962084|gb|ELA41628.1| hypothetical protein VICG_01376 [Vittaforma corneae ATCC 50505]
Length = 657
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 229/731 (31%), Positives = 352/731 (48%), Gaps = 92/731 (12%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M K GI VE P+E Y QLV + K+I+ Q NAL+ESPTGTGK+L +LC+ LA+
Sbjct: 1 MVRTKFNGIPVEIPYEPYPPQLVTISKLIECFQTNTNALIESPTGTGKSLSILCSVLAF- 59
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ + N Q +K I SRTH Q+ Q+I +L+ + YR
Sbjct: 60 -----YEQEKRRFNEQ---------------NKPFKIFICSRTHKQIDQLIDQLRKTIYR 99
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
P++ +LGS+ Q CI+ +S + +N AC L KK N R+ +G+
Sbjct: 100 PRITVLGSKNQYCINSTLS--KVEDKNTACAELIKKKACVYFNGKDRLI------KRIGE 151
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
+ DIE+L G+ CPYF RELQ+ DI+FAPYNYLID R+ ++ N+ILI
Sbjct: 152 KIFDIEELKREGKKCAGCPYFTARELQEDADIIFAPYNYLIDTSVRESSEIKLDNAILII 211
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHN+E C A S +++S L+ I+E I S G+ E L+ + I R
Sbjct: 212 DEAHNIEDCCRSAGSVEITSKLIEIVINELIGAIK-RSALLGEVRGEFLSLMD--IFRK- 267
Query: 301 LLKLEKRIAEVPINSKELGF-TKPGPYIYELLADLNITQET--AYKLIDIVEVAAELLQE 357
LK + E + KE + G + E L + + +E +YK + A + E
Sbjct: 268 -LKDHSQTNEFDVKGKENQMKIRKGKEVIEELDKMGVGKEAFLSYK----NSLQAIMKNE 322
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
D T+ ++ + IL ++ T AY + D + +
Sbjct: 323 DAKSLLSLNTSRFLQEMERILGMVL---FTGSEAYAYCFTKYKDEGY----------SYN 369
Query: 418 WWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAG 477
W +P + ++ SI L SGTL+P SF ELK F ++ PH+I ++Q++
Sbjct: 370 LWLLDPSVMFLPLVS-KIKSISLLSGTLTPFSSFCSELKFQFQHKLVAPHIIRTEQVFVA 428
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD--GLLIFFPSYYLMDQCIAC 535
+ G L +Y +++ Y ++ +V+IA V + G L+F PSY +
Sbjct: 429 SIRKGHLKQDLCGTYSTAETVAYLDQVSKIVVDIALHVKNEGGTLVFVPSYSFL------ 482
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKLKDTSTSGAVFFAVCR 593
N G ++ +VEP+ + F AIE Y +++ +TS +F V R
Sbjct: 483 --NKLAGRISG----------AIVEPKDGGMVEFEKAIEAYKQRIQKKATS--IFICVYR 528
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GK SEG+DF D RAVV G+P+ ++ DP++ LK+EY D K S +G
Sbjct: 529 GKASEGVDFRDEYSRAVVAIGIPYPSIRDPQIGLKKEYND-------------KTSGYNG 575
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFG 713
WY QA RA+NQA+GR IRH +D+G++ D R+ +S + WI +I+ + +
Sbjct: 576 RLWYEAQAFRALNQALGRSIRHSNDWGSVFLIDSRYGEKRYQSGLPSWIVSNIKIFETYS 635
Query: 714 DVVYTLTRFFR 724
V + F +
Sbjct: 636 QSVESFKSFIK 646
>gi|348687642|gb|EGZ27456.1| hypothetical protein PHYSODRAFT_554000 [Phytophthora sojae]
Length = 1025
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 227/716 (31%), Positives = 354/716 (49%), Gaps = 126/716 (17%)
Query: 95 PTILYTSRTHSQLRQVIQELKT-----------SNYRPKMV---ILGSREQLCIHREVSL 140
P I + SRTHSQL QV+ ELK SN K + +LGS+ +C++R+V+
Sbjct: 263 PRIYFCSRTHSQLAQVVDELKNCPVSYLDSPEDSNTYTKQLQTCVLGSKRNMCVNRKVN- 321
Query: 141 LRGSAQ-NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPC 198
R +Q + CR + + + D ++ P P+ DIEDLV + + C
Sbjct: 322 -RDPSQVDEKCRLALEGASCSYFKKRKKANDLRRHVP-----PVWDIEDLVKLAQKHREC 375
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
YF RE +IVFAPYNYL+DP R+ +G+ K+SI++ DEAHN+E C +AS ++
Sbjct: 376 AYFHAREALDHANIVFAPYNYLLDPSIREAVGITLKDSIIVLDEAHNVEDTCRSSASVEV 435
Query: 259 SSGLLTACISEAKNCIDISSTRRGQSSD-------------ETLNPDNFAILRALLLKLE 305
++ +L A I I I R +S + ++++ + AIL+ + +
Sbjct: 436 TTEVLAASIKAF--SIVIKHGNRPKSYNALLKLLNGINRWLQSVDSNANAILQPSGYEEK 493
Query: 306 KRIAE----VPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQ 361
++ + + + ++ G TK + E+ A++ +E +L + E + + Q Q
Sbjct: 494 SKVWDGADALAMLAEYSGLTKDN--LAEMKANVQEVREYENELGNSAESSQQATQSKASQ 551
Query: 362 NKKSTTA-----------CRIESISNILKIIFRD-------------KGTA---HSAYYR 394
+ + ++SI N+ +FRD K T+ SA +R
Sbjct: 552 DAAANPTGASVLLGALALATVQSIMNVADYMFRDNLKFIDDFKLVVIKSTSTWKESASFR 611
Query: 395 VHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQE 454
+ N D + K + WC N +A + + + S+ILTSGTLSPM+SFA E
Sbjct: 612 SPTKR---NGGDEWELK----MCIWCLNAAVAFSDIAS-QARSVILTSGTLSPMESFAGE 663
Query: 455 LKLNFPLRVENPHVIT-SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
L ++FP+R+E HV+ KQ++ G V GP L S+Y N+ Y+ +G ++ ++
Sbjct: 664 LGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDPRYQDSMGQLLLQYSQ 723
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL-FPLAIE 572
+P G+L+FFPSY L+++ WK T +W I + K EPR + F +E
Sbjct: 724 AIPGGILMFFPSYSLLNKLTTRWKKTK------LWGEIEQFKTVYSEPRNAGKDFDALLE 777
Query: 573 DYMAKLKDTST-------------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
DY KDT T SGA+F AV RGKVSEG+DF++ RAV+ G+PF +
Sbjct: 778 DY----KDTITKCTAEGDEAQDKKSGAIFLAVYRGKVSEGIDFSNDNARAVLCVGIPFPS 833
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ + +V LKR+Y D E + ++G WY+ QA RA+NQA+GR IRHR DY
Sbjct: 834 VKELQVSLKRKYQD--------EKSRMNMKLVNGHVWYHLQAFRALNQALGRCIRHRQDY 885
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQ-------CYSKFGDVVYTLTRFFREERI 728
GAI+ D R +S W++P+IQ C FGD FF+ R+
Sbjct: 886 GAIMLLDSRHRFNKHTKSLSKWMRPYIQEFEHGQMCVPMFGD-------FFQRNRM 934
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 3 TYKIRGIDVEFPF--EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+ I G +VEFP + Q M KV+ +L+ + +ALLESPTG+GKTL LLC++L ++
Sbjct: 21 AFMIMGYNVEFPRGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQ 80
Query: 61 KSL 63
K
Sbjct: 81 KQF 83
>gi|354497402|ref|XP_003510809.1| PREDICTED: Fanconi anemia group J protein homolog [Cricetulus
griseus]
gi|344242804|gb|EGV98907.1| Fanconi anemia group J protein-like [Cricetulus griseus]
Length = 1166
Score = 323 bits (827), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 214/684 (31%), Positives = 357/684 (52%), Gaps = 68/684 (9%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S ++V G SK P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 227 SANTVKKDHGGQSKRPKIYFGTRTHKQIAQITRELQKTAYSGVPMTILSSRDHTCVHPEV 286
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHL------GDEPIDIEDLVNIG 192
+ +N C L + C + V + NN H + DIE+LV++G
Sbjct: 287 --MGNFNRNEKCMELLDVKQGKSCYFYHGV--HRINNQHTLQSFPGMSKAWDIEELVSLG 342
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
R CPY+ REL DI+F PYNYL+D R+ + ++ K+ ++I DEAHN+E +
Sbjct: 343 RKLKACPYYTARELIDEADIIFCPYNYLLDAQIRESMDIKLKDQVVILDEAHNIEECARE 402
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
+AS+ ++ L E + I+ + ++ E L + ++ L E +
Sbjct: 403 SASYSVTEVQLRFARDELDSLINSNVRKKNH---EPLRDVCYNLINWLETNSEHLVERDY 459
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK-------- 364
+S ++ G + L + IT T L +A L +E+K K+
Sbjct: 460 ESSCKIW---SGNEMLLSLYRMGITNATFPVLQR--HFSAVLQKEEKAYGKEEAIQIPII 514
Query: 365 -STTACRIESISNILKIIFRDKGTAHSAYYRVHVRE--------ADANAADVL----KGK 411
++T ++ + +L +FR+ + + Y++ +++ A + + VL K
Sbjct: 515 SASTQIMLKGLFMVLDYLFRE-NSRFADDYKIAIQQTYSWTNQIAIFDKSGVLAVPKNKK 573
Query: 412 ASR------TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN 465
SR L++WC NP +A + + +V +I+LTSGTLSP+ SF+ EL + F +++E
Sbjct: 574 HSRQKIGVNVLNFWCLNPAVAFSDIND-KVRTIVLTSGTLSPLKSFSSELGVTFNIQLEA 632
Query: 466 PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
HV+++ Q+W G V GP G L +++++ ++ E++ E+G ++++ + V G+L F PS
Sbjct: 633 NHVVSNSQVWVGTVGSGPQGRNLCATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPS 692
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-DTS 582
Y L+++ W +T +W + K + EP+ + + F ++ Y +K
Sbjct: 693 YKLLEKLRERWVSTG------LWHSLESVKTVIAEPQRGEKTDFDELLQVYYDAIKFKGE 746
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGE 642
GA+ AVCRGKVSEGLDF+D RAVV G+PF + D +V LKR+Y D ++ +G
Sbjct: 747 KDGALLIAVCRGKVSEGLDFSDDNARAVVTVGIPFPNVKDLQVELKRQYNDHHSKLRG-- 804
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISL 700
L G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++P+R S +S
Sbjct: 805 -------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNSNPNRYISGLSK 857
Query: 701 WIQPHIQCYSKFGDVVYTLTRFFR 724
W++ IQ +S F + +LT F R
Sbjct: 858 WVRQQIQHHSTFASALESLTEFSR 881
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
Y I G+ + FP +AY QL M +++ L + + LLESPTG+GK+L LLC+ LAW++S
Sbjct: 8 YTIGGVKINFPCKAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQS 66
>gi|238013860|gb|ACR37965.1| unknown [Zea mays]
Length = 274
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 153/251 (60%), Positives = 192/251 (76%), Gaps = 14/251 (5%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRG++V+FPF+AYDCQ+ YM++VI+SLQ NALLESPTGTGKTLCLLCA+LAWR
Sbjct: 1 MPVYSIRGVNVDFPFDAYDCQITYMDRVIESLQQGKNALLESPTGTGKTLCLLCASLAWR 60
Query: 61 KSLGSFSTLGS--------QVNNQISGSQSSVNSS--QSGDSKLPTILYTSRTHSQLRQV 110
++ G F +G +Q S SQ S +S+ + S+ P I+Y SRTHSQLRQV
Sbjct: 61 RTFGEFLRVGRGGGGTKQLPYGSQPSASQQSEDSTSQKQQQSRYPVIIYASRTHSQLRQV 120
Query: 111 IQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD 170
I+ELK ++YRPKM +LGSREQ+CIH EVS L G AQNNAC FLCKK RRC H++ VA+
Sbjct: 121 IKELKATSYRPKMAVLGSREQMCIHDEVSKLHGRAQNNACHFLCKK---RRCPHNNHVAE 177
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL- 229
++KN P LG+EP DIEDL+NIGR GPCPY+++REL K+VDI+FAPYNYLIDP R+ L
Sbjct: 178 FIKNKPELGNEPFDIEDLINIGRHKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLN 237
Query: 230 GVEWKNSILIF 240
G+ W N++LI
Sbjct: 238 GIPWDNAVLIL 248
>gi|160333450|ref|NP_001103766.1| BRCA1 interacting protein C-terminal helicase 1 [Danio rerio]
gi|126843119|gb|ABO27623.1| Fanconi anemia J [Danio rerio]
Length = 1217
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 216/684 (31%), Positives = 343/684 (50%), Gaps = 82/684 (11%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRF 152
+P I + +RTH Q+ Q+ +ELK + Y M IL SR+ C+H EV + + +N C+
Sbjct: 271 IPKIFFGTRTHKQITQIARELKRTLYSTVPMTILSSRDHTCVHPEV--VPHANRNERCKE 328
Query: 153 LCKKGTNRRCNHHSRVADYMKNNP----HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQK 208
+ R C ++ V + H + DIE+LV +G C Y+ REL +
Sbjct: 329 FLEAKNGRSCRYYHNVHKMRDQSTLQWVHGLHQAWDIEELVRLGGKLRSCAYYAARELMQ 388
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
IVF PYNYL+DP R+ + + K I++ DEAHN+E ++ASF L+ L
Sbjct: 389 EACIVFCPYNYLLDPLIRESMEINLKEQIVVLDEAHNIEDCARESASFTLNQAQLLL--- 445
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP----- 323
A++ ID T + D L A L + E +E +
Sbjct: 446 -ARDEIDGMVT-------HNIRRDQHRPLLAFCCSLTNWVQESCGGLEEREYESSCKVWT 497
Query: 324 GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK--LQNKK----------STTACRI 371
G + + L IT +T + L+ +AA L +E++ L N + S T +
Sbjct: 498 GVEVLGIFRGLGITADT-FPLLQ-KNLAAVLEKEERVGLVNGREETVQVPTISSNTQSML 555
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVREA-------DANAADVLKGKASR---------- 414
+S+ +L+ +FR + + YRV ++++ D A + R
Sbjct: 556 KSLFMVLEFLFR-QNCRFADDYRVALQQSYMWTTQQDLPDAQGFFARPHRRRQSNRTKTL 614
Query: 415 --TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
TLS+WC NP +A + S V SI+LTSGTLSPM SF+ EL + F +++E HVI
Sbjct: 615 VHTLSFWCLNPAVAFSDLSST-VRSIVLTSGTLSPMGSFSSELGIKFSIQLEANHVINKS 673
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
Q+W G + GP G L +++++ ++ ++ E+G ++ + V G+L F PSY ++D+
Sbjct: 674 QVWVGTIGAGPQGRKLCATFQHAETFAFQDEVGALLLKVCHTVSRGVLCFLPSYKMLDKL 733
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKLKDTST-----SG 585
W NT +W+++ + K + EPR F ++ Y ++ T+ G
Sbjct: 734 RDRWTNTG------LWDKLEECKTVITEPRGGGKGDFDELLQTYYEAIRGTAAKGEKRDG 787
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKE 645
A+ AVCRGKVSEGLDF D RAVV G+PF + D +V LK +Y D A+S+G
Sbjct: 788 ALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDKHAKSRG----- 842
Query: 646 TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLWIQ 703
L G WY QA RA+NQA+GR IRHR+D+GA+I D+RF +P++ + +S W++
Sbjct: 843 ----LLPGGRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRTNPNKYITGLSKWVR 898
Query: 704 PHIQCYSKFGDVVYTLTRFFREER 727
++ + F + +L F + +R
Sbjct: 899 QLVRHHDTFTGAMQSLESFSQGQR 922
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
Y I G+ + FP +AY QL M +I+ L N + LLESPTG+GK+L LLC+ LAW+++
Sbjct: 8 YTIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSALAWQQA 66
>gi|332258882|ref|XP_003278520.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Nomascus leucogenys]
Length = 1248
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 213/701 (30%), Positives = 359/701 (51%), Gaps = 72/701 (10%)
Query: 79 GSQSSVNS---SQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCI 134
SQ S+N+ +G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+
Sbjct: 225 NSQESLNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCV 284
Query: 135 HREVSLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVN 190
H EV + +N C L + C + +++D G + DIE+LV+
Sbjct: 285 HPEV--VGNFNRNEKCMELRDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVS 342
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E
Sbjct: 343 LGKKLKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCA 402
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA- 309
++AS+ ++ L E + ++ + ++ E L ++++ L E +
Sbjct: 403 RESASYSVTEVQLRFARDELDSMVNNNIRKKDH---EPLRAVCYSLINWLEANSEYLVER 459
Query: 310 ------------EVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
E+ +N ++G T I + + +E I E A E+
Sbjct: 460 DYESACKIWSGNEMLLNLHKMGITTATFPILQGHFSAVLQKEEKISPIYGKEEAREV--- 516
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADV 407
++T ++ + +L +FR + + Y++ +++ +D N V
Sbjct: 517 ---PIISASTQIMLKGLFMVLDYLFR-QNNRFADDYKIAIQQTYSWTNQIDISDKNGLLV 572
Query: 408 LKGKASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
L R+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F
Sbjct: 573 LPKNKKRSRQKTAVHVLNFWCLNPAVAFSDING-KVQTIVLTSGTLSPMKSFSSELGVTF 631
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
+++E HVI Q+W G + GP G L ++++N ++ E++ E+G ++++ + V G+
Sbjct: 632 TIQLEANHVIKDSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGI 691
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAK 577
L F PSY L+++ W +T +W + K +VEP+ + + F ++ Y
Sbjct: 692 LCFLPSYKLLEKLKERWFSTG------LWHNLELVKTVIVEPQGGEKTNFDELLQVYYDA 745
Query: 578 LK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
+K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D +
Sbjct: 746 IKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHS 805
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK 695
+ +G L G WY QA RA+NQA+GR IRHR+D+GA+I D+RF +PSR
Sbjct: 806 KLRG---------LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRY 856
Query: 696 -SQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLK 735
S +S W++ IQ +S F + +L F ++ + + +LK
Sbjct: 857 ISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVLNVSLK 897
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|403274761|ref|XP_003929130.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Saimiri boliviensis boliviensis]
Length = 1252
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 212/693 (30%), Positives = 357/693 (51%), Gaps = 72/693 (10%)
Query: 79 GSQSSVNS---SQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCI 134
SQ S+N+ +G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ CI
Sbjct: 225 NSQESLNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCI 284
Query: 135 HREVSLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVN 190
H EV + +N C L + C + +++D G + DIE+LV+
Sbjct: 285 HPEV--VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVS 342
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E
Sbjct: 343 LGKKLRVCPYYTARELIQDADIIFCPYNYLLDAQIRETMDLNLKEQVVILDEAHNIEDCA 402
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA- 309
++AS+ ++ L E + ++ + ++ E L ++++ L E +
Sbjct: 403 RESASYSVTEVQLRFARDELDSMVNNNIRKKDH---EPLRAVCYSLINWLEANSEYLVER 459
Query: 310 ------------EVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
E+ +N ++G T I + + +E I E A E+
Sbjct: 460 DYESSCKIWSGNEMLLNLHKMGITTATFPILQGHFSAVLQKEEKISPIYGKEEAREV--- 516
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADV 407
++T ++ + +L +FR + + Y++ +++ +D N V
Sbjct: 517 ---PIISASTQIMLKGLFMVLDYLFR-HNSKFADDYKIAIQQTYSWTNQIDISDKNGWLV 572
Query: 408 LKGKASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
L R+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F
Sbjct: 573 LPKNKKRSRQKTAVHVLNFWCLNPAVAFSDING-KVRTIVLTSGTLSPMKSFSSELGVTF 631
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
+++E HVI + Q+W G + GP G L ++++N ++ E++ E+G ++++ + V G+
Sbjct: 632 TIQLEANHVIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGI 691
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAK 577
L F PSY L+++ W +T +W ++ K +VEP+ + + F ++ Y
Sbjct: 692 LCFLPSYKLLEKLRERWLSTG------LWHKLELAKTVIVEPQGGEKTDFDELLQVYYDA 745
Query: 578 LK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
+K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D +
Sbjct: 746 VKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHS 805
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK 695
+ +G L G WY QA RA+NQA+GR IRHR+D+GA+I D+R+ +PSR
Sbjct: 806 KLRG---------LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRYRNNPSRY 856
Query: 696 -SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
S +S WI+ IQ +S F + +L F ++ +
Sbjct: 857 ISGLSKWIRQQIQHHSTFESALESLAEFSKKHQ 889
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTISGVKINFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|114669761|ref|XP_511607.2| PREDICTED: Fanconi anemia group J protein [Pan troglodytes]
gi|410223276|gb|JAA08857.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410257750|gb|JAA16842.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410303552|gb|JAA30376.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410331379|gb|JAA34636.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
Length = 1249
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 213/690 (30%), Positives = 358/690 (51%), Gaps = 71/690 (10%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S +++ +G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 229 SSNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEV 288
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+LV++G+
Sbjct: 289 --VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKK 346
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 347 LKSCPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESA 406
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
S+ ++ L E + ++ + ++ E L A+ +L+ LE AE +
Sbjct: 407 SYSVTEVQLRFARDELDSMVNNNIRKKDH---EPLR----AVCCSLINWLEAN-AEYLVE 458
Query: 315 SKELGFTK--PGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK--------- 363
K G + L + IT TA I +A L +E+K+
Sbjct: 459 RDYESACKIWSGNEMLLTLHKMGIT--TATFPILQGHFSAVLQKEEKISPIYGKEEAREV 516
Query: 364 ---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADVLKG 410
++T ++ + +L +FR + + + Y++ +++ +D N VL
Sbjct: 517 PVISASTQIMLKGLFMVLDYLFR-QNSRFADDYKIAIQQTYSWTNQIDISDKNGLLVLPK 575
Query: 411 KASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
R+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F ++
Sbjct: 576 NKKRSRQKTAVHVLNFWCLNPAVAFSDING-KVQTIVLTSGTLSPMKSFSSELGVTFTIQ 634
Query: 463 VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
+E H+I + Q+W G + GP G L ++++N ++ E++ E+G ++++ + V G+L F
Sbjct: 635 LEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCF 694
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK- 579
PSY L+++ W +T +W + K +VEP+ + + F ++ Y +K
Sbjct: 695 LPSYKLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKY 748
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++ +
Sbjct: 749 KGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLR 808
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQ 697
G L G WY QA RA+NQA+GR IRHR+D+GA+I D+RF +PSR S
Sbjct: 809 G---------LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISG 859
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+S W++ IQ +S F + +L F ++ +
Sbjct: 860 LSKWVRQQIQHHSTFESALESLAEFSKKHQ 889
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|296201899|ref|XP_002806878.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Callithrix jacchus]
Length = 1252
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 212/688 (30%), Positives = 354/688 (51%), Gaps = 72/688 (10%)
Query: 79 GSQSSVNS---SQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCI 134
SQ S+N+ +G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+
Sbjct: 225 NSQESLNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCV 284
Query: 135 HREVSLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVN 190
H EV + +N C L + C + +++D G + DIE+LV+
Sbjct: 285 HPEV--VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVS 342
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E
Sbjct: 343 LGKKLRACPYYTARELIQDADIIFCPYNYLLDAQIRETMDLNLKEQVVILDEAHNIEDCA 402
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA- 309
++AS+ ++ L E + ++ + ++ E L ++++ L E +
Sbjct: 403 RESASYSVTEVQLRFARDELDSMVNNNVRKKDH---EPLRAVCYSLINWLEANSEYLVER 459
Query: 310 ------------EVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
E+ +N ++G T I + + +E I E A E+
Sbjct: 460 DYESSCKIWSGNEMLLNLHKMGITTATFPILQGHFSAVLQKEEKIPPIYGKEEAIEV--- 516
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADV 407
++T ++ + +L +FR + + + Y++ +++ +D N V
Sbjct: 517 ---PIISASTQIMLKGLFMVLDYLFR-QNSRFADDYKIAIQQTYSWTNQVDISDKNGWLV 572
Query: 408 LKGKASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
L R+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F
Sbjct: 573 LPKNKKRSRQKTAVHVLNFWCLNPAVAFSDING-KVRTIVLTSGTLSPMKSFSSELGVTF 631
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
+++E HVI + Q+W G V GP G L ++++N ++ E++ E+G ++++ + V G+
Sbjct: 632 TIQLEANHVIKNSQVWVGTVGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGI 691
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAK 577
L F PSY L+++ W +T +W ++ K +VEP+ + + F ++ Y
Sbjct: 692 LCFLPSYKLLEKLKERWLSTG------LWHKLELVKTVIVEPQGGEKTDFDELLQVYYDA 745
Query: 578 LK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
+K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D +
Sbjct: 746 IKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHS 805
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK 695
+ +G L G WY QA RA+NQA+GR IRHR+D+GA+I D+RF +P R
Sbjct: 806 KLRG---------LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPGRY 856
Query: 696 -SQISLWIQPHIQCYSKFGDVVYTLTRF 722
S +S WI+ IQ +S F + +L F
Sbjct: 857 ISGLSKWIRQQIQHHSTFESALESLAEF 884
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTISGVKINFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|57012613|sp|Q9BX63.1|FANCJ_HUMAN RecName: Full=Fanconi anemia group J protein; Short=Protein FACJ;
AltName: Full=ATP-dependent RNA helicase BRIP1; AltName:
Full=BRCA1-associated C-terminal helicase 1; AltName:
Full=BRCA1-interacting protein C-terminal helicase 1;
Short=BRCA1-interacting protein 1
gi|13661819|gb|AAK38111.1|AF360549_1 BRCA1-binding helicase-like protein BACH1 [Homo sapiens]
gi|75516497|gb|AAI01473.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|75516501|gb|AAI01475.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|313883612|gb|ADR83292.1| BRCA1 interacting protein C-terminal helicase 1 [synthetic
construct]
Length = 1249
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 213/690 (30%), Positives = 358/690 (51%), Gaps = 71/690 (10%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S +++ +G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 229 SSNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEV 288
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+LV++G+
Sbjct: 289 --VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKK 346
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 347 LKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESA 406
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
S+ ++ L E + ++ + ++ E L A+ +L+ LE AE +
Sbjct: 407 SYSVTEVQLRFARDELDSMVNNNIRKKDH---EPLR----AVCCSLINWLEAN-AEYLVE 458
Query: 315 SKELGFTK--PGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK--------- 363
K G + L + IT TA I +A L +E+K+
Sbjct: 459 RDYESACKIWSGNEMLLTLHKMGIT--TATFPILQGHFSAVLQKEEKISPIYGKEEAREV 516
Query: 364 ---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADVLKG 410
++T ++ + +L +FR + + + Y++ +++ +D N VL
Sbjct: 517 PVISASTQIMLKGLFMVLDYLFR-QNSRFADDYKIAIQQTYSWTNQIDISDKNGLLVLPK 575
Query: 411 KASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
R+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F ++
Sbjct: 576 NKKRSRQKTAVHVLNFWCLNPAVAFSDING-KVQTIVLTSGTLSPMKSFSSELGVTFTIQ 634
Query: 463 VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
+E H+I + Q+W G + GP G L ++++N ++ E++ E+G ++++ + V G+L F
Sbjct: 635 LEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCF 694
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK- 579
PSY L+++ W +T +W + K +VEP+ + + F ++ Y +K
Sbjct: 695 LPSYKLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKY 748
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++ +
Sbjct: 749 KGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLR 808
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQ 697
G L G WY QA RA+NQA+GR IRHR+D+GA+I D+RF +PSR S
Sbjct: 809 G---------LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISG 859
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+S W++ IQ +S F + +L F ++ +
Sbjct: 860 LSKWVRQQIQHHSTFESALESLAEFSKKHQ 889
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|397486822|ref|XP_003814520.1| PREDICTED: Fanconi anemia group J protein [Pan paniscus]
Length = 1249
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 213/690 (30%), Positives = 358/690 (51%), Gaps = 71/690 (10%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S +++ +G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 229 SSNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEV 288
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+LV++G+
Sbjct: 289 --VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKK 346
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 347 LKSCPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESA 406
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
S+ ++ L E + ++ + ++ E L A+ +L+ LE AE +
Sbjct: 407 SYSVTEVQLRFARDELDSMVNNNIRKKDH---EPLR----AVCCSLINWLEAN-AEYLVE 458
Query: 315 SKELGFTK--PGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK--------- 363
K G + L + IT TA I +A L +E+K+
Sbjct: 459 RDYESACKIWSGNEMLLTLHKMGIT--TATFPILQGHFSAVLQKEEKISPIYGKEEAREV 516
Query: 364 ---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADVLKG 410
++T ++ + +L +FR + + + Y++ +++ +D N VL
Sbjct: 517 PVISASTQIMLKGLFMVLDYLFR-QNSRFADDYKIAIQQTYSWTNQIDISDKNGLLVLPK 575
Query: 411 KASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
R+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F ++
Sbjct: 576 NKKRSRQKTAVHVLNFWCLNPAVAFSDING-KVQTIVLTSGTLSPMKSFSSELGVTFTIQ 634
Query: 463 VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
+E H+I + Q+W G + GP G L ++++N ++ E++ E+G ++++ + V G+L F
Sbjct: 635 LEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCF 694
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK- 579
PSY L+++ W +T +W + K +VEP+ + + F ++ Y +K
Sbjct: 695 LPSYKLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKY 748
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++ +
Sbjct: 749 KGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLR 808
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQ 697
G L G WY QA RA+NQA+GR IRHR+D+GA+I D+RF +PSR S
Sbjct: 809 G---------LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISG 859
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+S W++ IQ +S F + +L F ++ +
Sbjct: 860 LSKWVRQQIQHHSTFESALESLAEFSKKHQ 889
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|301897118|ref|NP_114432.2| Fanconi anemia group J protein [Homo sapiens]
gi|119571815|gb|EAW51430.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571816|gb|EAW51431.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571817|gb|EAW51432.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571818|gb|EAW51433.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
Length = 1249
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 213/690 (30%), Positives = 358/690 (51%), Gaps = 71/690 (10%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S +++ +G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 229 SSNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEV 288
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+LV++G+
Sbjct: 289 --VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKK 346
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 347 LKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESA 406
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
S+ ++ L E + ++ + ++ E L A+ +L+ LE AE +
Sbjct: 407 SYSVTEVQLRFARDELDSMVNNNIRKKDH---EPLR----AVCCSLINWLEAN-AEYLVE 458
Query: 315 SKELGFTK--PGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK--------- 363
K G + L + IT TA I +A L +E+K+
Sbjct: 459 RDYESACKIWSGNEMLLTLHKMGIT--TATFPILQGHFSAVLQKEEKISPIYGKEEAREV 516
Query: 364 ---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADVLKG 410
++T ++ + +L +FR + + + Y++ +++ +D N VL
Sbjct: 517 PVISASTQIMLKGLFMVLDYLFR-QNSRFADDYKIAIQQTYSWTNQIDISDKNGLLVLPK 575
Query: 411 KASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
R+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F ++
Sbjct: 576 NKKRSRQKTAVHVLNFWCLNPAVAFSDING-KVQTIVLTSGTLSPMKSFSSELGVTFTIQ 634
Query: 463 VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
+E H+I + Q+W G + GP G L ++++N ++ E++ E+G ++++ + V G+L F
Sbjct: 635 LEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCF 694
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK- 579
PSY L+++ W +T +W + K +VEP+ + + F ++ Y +K
Sbjct: 695 LPSYKLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKY 748
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++ +
Sbjct: 749 KGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLR 808
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQ 697
G L G WY QA RA+NQA+GR IRHR+D+GA+I D+RF +PSR S
Sbjct: 809 G---------LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISG 859
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+S W++ IQ +S F + +L F ++ +
Sbjct: 860 LSKWVRQQIQHHSTFESALESLAEFSKKHQ 889
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|297486418|ref|XP_002695655.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein,
partial [Bos taurus]
gi|296477040|tpg|DAA19155.1| TPA: BRCA1 interacting protein C-terminal helicase 1 [Bos taurus]
Length = 1169
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 352/685 (51%), Gaps = 62/685 (9%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S ++ G K+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 165 SSNTTKKDHGGKFKIPKIYFGTRTHKQIAQITRELQRTAYSGVPMTILSSRDHTCVHPEV 224
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLG-DEPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+LV++GR
Sbjct: 225 --MGNFNRNEKCMELLDGKNGKSCYFYHGVHKMSDQHTLQTFQGMHKAWDIEELVSLGRK 282
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 283 LKACPYYTARELMQNADIIFCPYNYLLDAQIRETMDINLKEQVVILDEAHNIEDCARESA 342
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI------ 308
S+ ++ L E + I+ + ++ + L A L +R
Sbjct: 343 SYSVTEVQLRFARDELDSMINYNIRKKDHEPLRAVCCSLINWLEASSEHLVERNYESSCK 402
Query: 309 ----AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK 364
+E+ +N ++G T I + + +E I E A E+
Sbjct: 403 VWSGSEMLLNLHKMGITTATFPILQGHFSAVLQREEKVPSIHGKEEAREI------PVIS 456
Query: 365 STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADA--NAADV--------------L 408
++T ++ + +L +FR + + + Y+V +++ + N +D L
Sbjct: 457 ASTQIMLKGLFMVLDYLFR-QNSRFADDYKVAIQQTYSWINQSDTTDHGLLILSKNKKRL 515
Query: 409 KGKAS-RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPH 467
+ KA+ R L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F +++E H
Sbjct: 516 RQKAAVRVLNFWCLNPAVAFSDING-KVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANH 574
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
VI + Q+W G + GP G L +++++ ++ E++ E+G ++++ + + G+L F PSY
Sbjct: 575 VINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGALLLSVCQTISQGILCFLPSYK 634
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKLK-DTSTS 584
L+++ W +T +W + K +VEP+ F ++ Y +K
Sbjct: 635 LLEKLKERWLSTG------LWYNLELVKTVIVEPQGGEKIDFDELLQMYYDAIKYKGEKD 688
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
GA+ AVCRGKVSEGLDF+D RAVV G+PF + D +V LKR+Y D ++ +G
Sbjct: 689 GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVELKRQYNDQHSKLRG---- 744
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLWI 702
L G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++PSR S +S W+
Sbjct: 745 -----LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWV 799
Query: 703 QPHIQCYSKFGDVVYTLTRFFREER 727
+ IQ +S F + +L F ++ +
Sbjct: 800 RQLIQHHSTFESALESLAEFAKKHQ 824
>gi|297462303|ref|XP_002702129.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein [Bos
taurus]
Length = 1232
Score = 320 bits (820), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 352/685 (51%), Gaps = 62/685 (9%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S ++ G K+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 228 SSNTTKKDHGGKFKIPKIYFGTRTHKQIAQITRELQRTAYSGVPMTILSSRDHTCVHPEV 287
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLG-DEPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+LV++GR
Sbjct: 288 --MGNFNRNEKCMELLDGKNGKSCYFYHGVHKMSDQHTLQTFQGMHKAWDIEELVSLGRK 345
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 346 LKACPYYTARELMQNADIIFCPYNYLLDAQIRETMDINLKEQVVILDEAHNIEDCARESA 405
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI------ 308
S+ ++ L E + I+ + ++ + L A L +R
Sbjct: 406 SYSVTEVQLRFARDELDSMINYNIRKKDHEPLRAVCCSLINWLEASSEHLVERNYESSCK 465
Query: 309 ----AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK 364
+E+ +N ++G T I + + +E I E A E+
Sbjct: 466 VWSGSEMLLNLHKMGITTATFPILQGHFSAVLQREEKVPSIHGKEEAREI------PVIS 519
Query: 365 STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADA--NAADV--------------L 408
++T ++ + +L +FR + + + Y+V +++ + N +D L
Sbjct: 520 ASTQIMLKGLFMVLDYLFR-QNSRFADDYKVAIQQTYSWINQSDTTDHGLLILSKNKKRL 578
Query: 409 KGKAS-RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPH 467
+ KA+ R L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F +++E H
Sbjct: 579 RQKAAVRVLNFWCLNPAVAFSDING-KVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANH 637
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
VI + Q+W G + GP G L +++++ ++ E++ E+G ++++ + + G+L F PSY
Sbjct: 638 VINNSQVWVGTIGSGPKGRSLCATFQHTETFEFQDEVGALLLSVCQTISQGILCFLPSYK 697
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKLK-DTSTS 584
L+++ W +T +W + K +VEP+ F ++ Y +K
Sbjct: 698 LLEKLKERWLSTG------LWYNLELVKTVIVEPQGGEKIDFDELLQMYYDAIKYKGEKD 751
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
GA+ AVCRGKVSEGLDF+D RAVV G+PF + D +V LKR+Y D ++ +G
Sbjct: 752 GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVELKRQYNDQHSKLRG---- 807
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLWI 702
L G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++PSR S +S W+
Sbjct: 808 -----LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWV 862
Query: 703 QPHIQCYSKFGDVVYTLTRFFREER 727
+ IQ +S F + +L F ++ +
Sbjct: 863 RQLIQHHSTFESALESLAEFAKKHQ 887
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 7 YTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 66
>gi|301777952|ref|XP_002924394.1| PREDICTED: Fanconi anemia group J protein-like [Ailuropoda
melanoleuca]
gi|281342514|gb|EFB18098.1| hypothetical protein PANDA_013720 [Ailuropoda melanoleuca]
Length = 1249
Score = 320 bits (820), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 208/701 (29%), Positives = 361/701 (51%), Gaps = 90/701 (12%)
Query: 80 SQSSVNSSQ---SGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIH 135
SQ S N+++ G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H
Sbjct: 226 SQDSSNTTKKDHGGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVH 285
Query: 136 REVSLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVNI 191
EV + +N C L + C + +++D G + DIE+LV++
Sbjct: 286 PEV--VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTLQGMCKAWDIEELVSL 343
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G+ CPY+ REL + I+F PYNYL+D R+ + + K I+I DEAHN+E
Sbjct: 344 GKKLKACPYYTARELIEDAHIIFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEDCAR 403
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI--- 308
++AS+ ++ L E + ++ + ++ E L ++++ L E +
Sbjct: 404 ESASYSVTEVQLRFARDELDSMVNNNIRKKDH---EPLRAVCYSLINWLEANSEHLVERD 460
Query: 309 ----------AEVPINSKELGFTKP------GPYIYELLAD---LNITQETAYKLIDIVE 349
+E+ +N ++G T G + L + L I + +++ I+
Sbjct: 461 YESSCKIWSGSEMLLNLHKMGITTATFPILQGHFSAVLQKEEKVLPIHGKEESRIVPIIS 520
Query: 350 VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE---------- 399
+ +++ ++ + + +FR + + + Y+V +++
Sbjct: 521 ASTQIM---------------LKGLFMVFDYLFR-QNSRFADDYKVAIQQTYSWINQIDT 564
Query: 400 ADANAADVLKGKASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSF 451
+D N L R+ L++WC NP +A + S +V +I+LTSGTLSPM SF
Sbjct: 565 SDKNGFFALAKNKKRSRQKTAVHVLNFWCLNPAVAFSDISG-KVWTIVLTSGTLSPMKSF 623
Query: 452 AQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNI 511
+ EL + F +++E HVI + Q+W G + GP G L +++++ ++ E++ E+G ++++
Sbjct: 624 SSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGELLLSV 683
Query: 512 ARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPL 569
+ V G+L F PSY L+++ W +T +W+ + K +VEP+ + + F
Sbjct: 684 CQTVSQGILCFLPSYKLLEKLKERWLDTG------LWDNLELVKTVIVEPQGGEKTDFDE 737
Query: 570 AIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
++ Y +K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LK
Sbjct: 738 LLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELK 797
Query: 629 REYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
R+Y D ++ +G L G WY QA RA+NQA+GR IRH++D+GA+I D+R
Sbjct: 798 RQYNDQHSKLRG---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDR 848
Query: 689 F-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
F ++PSR S +S W++ IQ +S F + +LT F ++ +
Sbjct: 849 FRSNPSRYISGLSKWVRQQIQHHSTFESALESLTEFSKKHQ 889
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|431890862|gb|ELK01741.1| Fanconi anemia group J protein [Pteropus alecto]
Length = 1164
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 205/689 (29%), Positives = 351/689 (50%), Gaps = 69/689 (10%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S +++ Q SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 229 SSNAIKKDQGAKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEV 288
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+L+++G+
Sbjct: 289 --VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMYKAWDIEELISLGKK 346
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 347 VKACPYYTARELMENADIIFCPYNYLLDAQIRESMDINLKEQVIILDEAHNIEDCARESA 406
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI------ 308
S+ ++ L E + ++ + ++ L + ++ L E +
Sbjct: 407 SYSVTEVQLRFARDELDSMVNNNIRKKDHGP---LRAVCYGLINWLEANSEHLVERDYES 463
Query: 309 -------AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQ 361
+E+ +N +++G T I + + +E I E A E+
Sbjct: 464 SCKIWSGSEMLLNLQKMGITTATFPILQGHFSAVLQKEEKISSIHGKEEAREV------P 517
Query: 362 NKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA----------DANAADVL--- 408
++T ++ + +L +FR G + Y+V +++ D N VL
Sbjct: 518 IISASTQIMLKGLFMVLDYLFRQNG-RFADDYKVAIQQTYSWINQTDALDKNGFLVLPKN 576
Query: 409 -----KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
+ A L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F +++
Sbjct: 577 KKCLRQKTAVHVLNFWCLNPAVAFSDIND-KVWTIVLTSGTLSPMKSFSSELGVTFTIQL 635
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
E HVI + Q+W G + GP G L +++++ ++ ++ E+G ++++ + V G+L F
Sbjct: 636 EANHVINNSQVWVGTIGSGPKGQNLCATFQHTETFAFQDEVGALLLSVCQTVSQGILCFL 695
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-D 580
PSY L+++ W +T +W + K ++EP+ + + F ++ Y +K
Sbjct: 696 PSYKLLEKLKERWLDTG------LWRDLELVKTVIIEPQRGEKTNFDELLQVYYDAIKYK 749
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR Y D +Q +G
Sbjct: 750 GGKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRRYNDQHSQLRG 809
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQI 698
L G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++P+R S +
Sbjct: 810 ---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPNRYISGL 860
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREER 727
S WI+ IQ +S F + +L F ++ +
Sbjct: 861 SKWIRQQIQHHSTFESALESLAEFSKKHQ 889
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L NK + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKINFPCKAYPSQLAMMNSIVRGLNNKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|426238589|ref|XP_004013233.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Ovis aries]
Length = 1234
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 208/686 (30%), Positives = 349/686 (50%), Gaps = 63/686 (9%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S ++ G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 227 SSNTTKKDHGGKSKIPKIYFGTRTHKQIAQITRELQRTAYSGVPMTILSSRDHSCVHPEV 286
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLG-DEPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+LV++GR
Sbjct: 287 --IGNFNRNERCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMHKAWDIEELVSLGRK 344
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 345 LKACPYYTARELMQDADIIFCPYNYLLDAQIRETMDINLKEQVVILDEAHNIEDCARESA 404
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI------ 308
S+ ++ L E + I+ + ++ + L A L +R
Sbjct: 405 SYSVTEVQLRFARDELDSMINYNIRKKDHEPLRAVCCSLINWLEASSEHLVERDYESSCK 464
Query: 309 ----AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK 364
+E+ +N ++G T I + + +E I E A E+
Sbjct: 465 VWSGSEMLLNLHKMGITTATFPILQGHFSAVLQREEKVPSIHGKEEAREI------PVIS 518
Query: 365 STTACRIESISNILKIIFRDKGTAHSAYYRVHVREA----------DANAADVLKGKASR 414
++T ++ + +L +FR + + + Y+V +++ D N +L R
Sbjct: 519 ASTQIMLKGLFMVLDYLFR-QNSRFADDYKVAIQQTYSWINQTDTTDKNGLLILSKNKKR 577
Query: 415 T--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F +++E
Sbjct: 578 SRQKAAVHVLNFWCLNPAVAFSDING-KVWTIVLTSGTLSPMKSFSSELGVTFTIQLEAN 636
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HVI + Q+W G + GP G L +++++ ++ E++ E+G ++++ + V G+L F PSY
Sbjct: 637 HVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSY 696
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKLK-DTST 583
L+++ W +T +W + K +VEP+ F ++ Y +K
Sbjct: 697 KLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKIDFDELLQVYYDAIKYKGEK 750
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ AVCRGKVSEGLDF+D RAVV G+PF + D +V LK++Y D ++ +G
Sbjct: 751 DGALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVELKKQYNDQHSKLRG--- 807
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLW 701
L G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++PSR S +S W
Sbjct: 808 ------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKW 861
Query: 702 IQPHIQCYSKFGDVVYTLTRFFREER 727
++ IQ +S F + +L F ++ +
Sbjct: 862 VRQLIQHHSTFESALESLAEFSKKHQ 887
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 6 YTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 65
>gi|307177078|gb|EFN66346.1| Fanconi anemia group J protein [Camponotus floridanus]
Length = 772
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 327/651 (50%), Gaps = 77/651 (11%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRPK-MVILGSREQLCIHREVSLLRGSAQNNACR 151
K+P I Y +RTH Q++QV++ELK + YR K M IL SR+ CI + +N C+
Sbjct: 124 KVPKIYYGTRTHKQIQQVVRELKKTVYRDKRMTILSSRQYTCIQKS-----NKNKNELCK 178
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGDE---PIDIEDLVNIGRTFGPCPYFMTRELQK 208
L + +C +++ D K L +E P DIEDL + G+ G CPYF R L
Sbjct: 179 ELLDPLKSTKCLYYN---DQSKKRMALFNELEKPWDIEDLFSFGKDIGICPYFGARSLMD 235
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
+I+F PYNY++DP R+ + + K I+I DEAHN+E C +AAS + + L
Sbjct: 236 QAEIIFCPYNYIVDPHIRESMQINLKGDIVILDEAHNIEDTCREAASVNFRNDELRIA-- 293
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPI----NSKELGFTKPG 324
A +C S R + D D + I+ L + K + + + N++ + G
Sbjct: 294 -ADDCTHWSRKYRNRDRDR----DIYTIIETYLTDIAKFLEAIDVKQNSNNEMVNNCWLG 348
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRD 384
LL NI D ++A + +E K + + +++IS K I D
Sbjct: 349 AEFLVLLDMNNIGSSKFSAFHDASKMAIQHYEEMKQETRPDKI---VQAISQDTKRILED 405
Query: 385 KGTAHSAY--------YRVHVREADANAADVL------------------KGKASRTLSW 418
A YRV V E+ + ++ K K R +
Sbjct: 406 LCFAIQMLTSDTFVNDYRVCVIESMEPSKKIVIPENTWISTKKNFEFSFFKNKPLRIMKL 465
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGI 478
C NP + +R+ V S+I+ SGTL+P+ SF EL FP V H+I+ Q++
Sbjct: 466 LCMNPAVVFAPLARI-VRSVIVASGTLTPITSFQSELGTKFPHVVNPDHIISKDQVYVRC 524
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
+P GP+G L +++ N +S ++ ELG+ ++ + VP G+L FF SY M++ W+N
Sbjct: 525 IPRGPNGKTLMANFENVNSWNFQDELGSLVLQVCDAVPYGVLCFFSSYITMNKLHDRWRN 584
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST------SGAVFFAVC 592
T W ++ K KK VEPR +S P +E+Y ++++S+ SGA+FFAV
Sbjct: 585 TG------TWSKLEKLKKIFVEPRNNSNLPTMMEEYCNVIRESSSKSFHVASGAIFFAVY 638
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGKV+EG+DF+D+ R V+ G+P+ + V +K Y D +S+G FL
Sbjct: 639 RGKVAEGIDFSDNDARCVLAVGIPYRNKNE--VSMKMNYND-SNKSKG---------FLP 686
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G +WY A RA+NQA+GR IRH++D+GA++ DERF + + + + WI+
Sbjct: 687 GSEWYTVDAFRALNQALGRCIRHKNDWGAVLLVDERFQNRHKINYLPKWIK 737
>gi|399218668|emb|CCF75555.1| unnamed protein product [Babesia microti strain RI]
Length = 838
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 220/782 (28%), Positives = 377/782 (48%), Gaps = 112/782 (14%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
+ GIDV+FP++ Y+ Q + +E +I+S++ NAL+ESPTGTGKTLCLLCA+LA+
Sbjct: 8 VLGIDVQFPYKIYEPQKLLIEAIIRSIEYGQNALIESPTGTGKTLCLLCASLAYL----- 62
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLP--TILYTSRTHSQLRQVIQELKTSNYRPKM 123
D ++P I+YT+RTH QL I E K Y ++
Sbjct: 63 ------------------------CDKRIPGLKIIYTTRTHGQLNHFINEFKKVPYYDRL 98
Query: 124 -------VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP 176
ILGSR++LCIH + S ++G+A + C+ L R C +++ NN
Sbjct: 99 REIGINATILGSRDKLCIHSQCSKMKGNALDGYCKALVHT---RTCTYYNGYRSKEYNNL 155
Query: 177 HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
++ + +D+EDL ++G+ +G CP+++ RE KT + + PYNYL R + ++ ++
Sbjct: 156 NILMDVMDVEDLTSMGKKYGFCPFYVMREAHKTSNFILMPYNYLFCQTIRDSIELDLNDA 215
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID-ISSTRRGQSSDETLNPDNFA 295
I+I DEAHN++ SF++ + I K I ++ + D+ +
Sbjct: 216 IIIIDEAHNIDDFAERVMSFNIYQMDVIRSIDFLKRIITTVNEDMYNKEKDDNPYLNKLL 275
Query: 296 ILRALLLKLEKRIAEVPINSKEL-------------GFTKPGPYIYELLADLN-----IT 337
L A L +L+ ++ + +++ + G I++ ++ LN I
Sbjct: 276 SLYATLQRLDCFLSSLDLDNNRMMHKIKRVDFHYTVGKVGDDFVIFDTISILNTLTSAIL 335
Query: 338 QETAYKLID-----IVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY 392
+ + ++ + + A + ++ + I+ + N L + A+ +
Sbjct: 336 DKNSQNSLEQEFGCLTFIMATKISDESFNKNVNIEIQSIDRLKNSLLQLTSQWLRANCQH 395
Query: 393 YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFA 452
+ +R N + R+L + C N + ++ ++ILTSGTLSP+D+F
Sbjct: 396 FYAVLRIDTGNNNNKF---MYRSLLFECMNASCTFTKLKNEKIRNLILTSGTLSPIDNFI 452
Query: 453 QELK---LNFPLRVENPHVITSKQIWAGIVP-------------VGP-SGYLLNSSYRNR 495
+ + FP+ +EN H+I+S ++W G + VG L S+Y R
Sbjct: 453 SNISGGYIKFPIVLENEHIISSDRVWVGCISSKLKIFRERFRDKVGNFEDQQLISTYSTR 512
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
S EY +LG + + VP G+L FFPSY M++ I WKNT I+ + +K
Sbjct: 513 SSHEYIVKLGILLKLFVKSVPGGILCFFPSYTNMNETIEVWKNTG------IYHNLYSYK 566
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSG--AVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+E +S+ +I+D + K+ SG A+FFAV RGK++EG+DF + R + I
Sbjct: 567 LIFIEVVKSTDSNDSIDDNLNSFKNVVDSGRGALFFAVFRGKIAEGVDFPNDYCRGIFIC 626
Query: 614 GMPFATMTDPKVRLKREYL--------DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
G+P+ D +V LK Y+ D+ + G Y +W+ A +AV
Sbjct: 627 GIPYPNPHDFRVSLKMNYIRNTQNNSTDVVNALRDGTY-----------NWHVLSAIKAV 675
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
NQA+GR IRH DYGAI+ D R+ + + + Q+S W+ ++ +S + +L +FF +
Sbjct: 676 NQAMGRCIRHADDYGAILLADVRYEYKNIQVQLSKWVLKSLEIFSDTVALSNSLDKFFLK 735
Query: 726 ER 727
R
Sbjct: 736 FR 737
>gi|297715610|ref|XP_002834155.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Pongo abelii]
Length = 1248
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 209/688 (30%), Positives = 357/688 (51%), Gaps = 67/688 (9%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S +++ +G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H E
Sbjct: 229 SSNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEA 288
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGD-EPIDIEDLVNIGRT 194
+ +N C L + C + +++D G + DIE+LV++G+
Sbjct: 289 --VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKK 346
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 347 IKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESA 406
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
S+ ++ L E + ++ + ++ E L ++++ L E + +
Sbjct: 407 SYSVTEVQLRFARDELDSMVNNNIRKKDH---EPLRAVCYSLINWLEANSEYLVERDYES 463
Query: 315 SKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL---QNKKST----- 366
+ ++ G + L + IT TA I +A L +E+K+ K+ T
Sbjct: 464 ACKIW---SGNEMLLTLHKMGIT--TATFPILQGHFSAVLQKEEKILPIYGKEETREVPV 518
Query: 367 ----TACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADVLKGKA 412
T ++ + +L +FR + + + Y++ +++ +D N VL
Sbjct: 519 ISASTQIMLKGLFMVLDYLFR-QNSRFADDYKIAIQQTYSWTNQIDISDKNGLLVLPKNK 577
Query: 413 SRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE 464
R+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F +++E
Sbjct: 578 KRSRQKTAVHVLNFWCLNPAVAFSDING-KVQTIVLTSGTLSPMKSFSSELGVTFTIQLE 636
Query: 465 NPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
HVI + Q+W G + GP G L ++++N ++ E++ E+G ++++ + V G+L F P
Sbjct: 637 ANHVIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCFLP 696
Query: 525 SYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-DT 581
SY L+++ W +T +W + K +VEP+ + + F ++ Y +K
Sbjct: 697 SYKLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKYKG 750
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++ +G
Sbjct: 751 EKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRG- 809
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQIS 699
L G WY QA RA+NQA+GR IRHR+D+GA+I D+RF +P R S +S
Sbjct: 810 --------LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPGRYISGLS 861
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFFREER 727
W++ IQ +S F + +L F ++ +
Sbjct: 862 KWVRQQIQHHSTFESALESLAEFSKKHQ 889
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|66807703|ref|XP_637574.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|60465999|gb|EAL64066.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 1078
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 211/717 (29%), Positives = 352/717 (49%), Gaps = 98/717 (13%)
Query: 64 GSFSTLGSQVNNQI-----SGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSN 118
GS +T + NN++ G+Q + K PTI + SRTHSQ++Q+ ELK +
Sbjct: 397 GSMTTTTTIQNNELIDYDNDGTQKFIKK------KSPTIFFCSRTHSQIKQLTGELKKTP 450
Query: 119 YRPKMVILGSREQLCIH-------REVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADY 171
YRP MV+L SR+Q CI+ +++ + ++ CRF ++ + +A
Sbjct: 451 YRPNMVVLASRDQYCINPLLKDVPKKLEKCKKLLLDHGCRF-------KKTEQQTSLA-- 501
Query: 172 MKNNPHLG---DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
K++ LG E DIEDL+ G+ CPYF +R++ + D++F PYNYLIDP RK
Sbjct: 502 -KSSDFLGGGKKEVWDIEDLMEAGQAHSECPYFASRDMIEKADLIFCPYNYLIDPQIRKS 560
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLS-SGLLTACISEAKNCIDISSTRRGQSSDE 287
+ SI+IFDEAHN+E + +SFD S L C K+CI S T S+++
Sbjct: 561 FADKVAGSIVIFDEAHNIEDALMETSSFDSSLEELNEHCYQNFKDCIMNSRTMSMLSNEK 620
Query: 288 TLNPDN-FAILRALLLKLEKRIAEV-PINSKELGFTKPGPYIYELLADLNITQETAYKLI 345
L + +L +++ + K++ + PI+ ++ G I + + + + +
Sbjct: 621 ALAIHYCYKLLESIIAWINKKVQTLKPIDFEKHQNVWKGEKILNIFEEFGLNETNYFSFR 680
Query: 346 DIVEVAAELLQE--------------------------------DKLQNKKSTTACRIES 373
D + A L E K+ +ES
Sbjct: 681 DHL---ATLFDEGDGTSDNGKEGGGGSLSFPSKGKGGIGVGSNKQKIDPVPQRALVLLES 737
Query: 374 ISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSW------WCFNPGIAM 427
+ +I+++KG YR+ +++A A + K K+++ W W +P IA
Sbjct: 738 FEKVTAMIYQNKGWIED--YRLVLQKASAFQTNGGK-KSNQGTKWNYQFGIWAMSPRIAF 794
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHV-ITSKQIWAGIVPVGPSGY 486
+ S++LTSGTLSP+ SF EL FP+ E ++ +++ W G + G G
Sbjct: 795 SSLVQ-ATRSVVLTSGTLSPLYSFPMELAAKFPISAEMGNLPDIAQRAWIGTLSHGVKGT 853
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
L ++ + ++++ LG TI+ ++P G+L FFPSY +++ ++ W T
Sbjct: 854 KLICTHGPSEGLDFQDSLGETILQHIELIPSGVLCFFPSYGFLEKLLSRWDETG------ 907
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
I ++I K+ EP+ F +++Y ++K GA+ FAVCRGKVSEG+DF+D
Sbjct: 908 ILKKINAKKRYFYEPKNQREFIETLDNYREEIKQRPNKGAILFAVCRGKVSEGIDFSDEY 967
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
R V++ G+P+ ++ D ++ LK+E+ D + +SG DWY QA RA+N
Sbjct: 968 ARGVIVVGIPYPSLVDLRIVLKKEHNDTNKKG------------ISGGDWYKLQAYRALN 1015
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
QA+GR IRH++DYG+I+ DERF + +S W + I+ + +L F+
Sbjct: 1016 QALGRCIRHKNDYGSILLIDERFTQMGNWNSLSKWTRSCIKNNRNLNTSLSSLKLFY 1072
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
YKI V+FPF+ Y CQ M ++++ L +K N +LESPTGTGKTL LLC++LAW++
Sbjct: 190 VYKIGNYKVKFPFKPYACQASMMSRILEGLDSKENCILESPTGTGKTLSLLCSSLAWQE 248
>gi|149053741|gb|EDM05558.1| BRCA1 interacting protein C-terminal helicase 1 (predicted) [Rattus
norvegicus]
Length = 964
Score = 316 bits (810), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 219/733 (29%), Positives = 369/733 (50%), Gaps = 76/733 (10%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S ++V SK P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 226 SANTVKKDNGDQSKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEV 285
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP----HLGDEPIDIEDLVNIGRT 194
+ +N C L + C + V H + DIE+LV++GR
Sbjct: 286 --VGNFNRNEKCMELLDGKHGKSCYFYHGVHRISNQQTLQFLHGISKAWDIEELVSLGRK 343
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + ++ K ++I DEAHN+E + A
Sbjct: 344 LKACPYYTARELIDSADIIFCPYNYLLDSQIRESMDIKLKEQVVILDEAHNIEECARETA 403
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA----- 309
S+ ++ L E + I+ S+ R+ S E L + ++ L + +
Sbjct: 404 SYSVTEVQLRFARDELDSLIN-SNIRK--KSHEPLRDVCYNLINWLETNSKNLVERDYES 460
Query: 310 --------EVPINSKELGFTKPG-PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
E+ +N +G T P + + L+ + +E +V + +E+ +
Sbjct: 461 SCKIWSGNEMLLNLHRMGITAASFPVLQKHLSAVLQKEE---------KVTSTHGKEEAI 511
Query: 361 QNK--KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA----------DANAA-DV 407
Q ++T ++ + +L +FR K + + Y+V +++ D NA V
Sbjct: 512 QIPIISASTQIMLKGLFMVLDYLFR-KNSRFADDYKVAIQQTYSWTNQIAIFDKNALLPV 570
Query: 408 LKGK-------ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
K K L++WC NP +A + + +V +I+LTSGTLSP+ SF+ EL + F
Sbjct: 571 PKNKKHSRQKIGVNVLNFWCLNPAVAFSDIND-KVRTIVLTSGTLSPLKSFSSELGVTFN 629
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
+++E HVI++ Q+W G V GP G L +++++ ++ E++ E+G ++++ + V G+L
Sbjct: 630 IQLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGMLLLSVCQTVSQGIL 689
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKL 578
F PSY L+++ W T +W + K + EP+ + + F ++ Y +
Sbjct: 690 CFLPSYKLLEKLRERWI------FTGLWHSLESVKTVIAEPQGGEKTDFDELLQVYYDAI 743
Query: 579 K-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++
Sbjct: 744 KFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSK 803
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK- 695
+G L G WY QA RA+NQA+GR IRH++D+GA+I D+RF +P R
Sbjct: 804 LRG---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPDRYI 854
Query: 696 SQISLWIQPHIQCYSKFGDVVYTLTRFF-REERICGSTNLKLIKTEVSGDVRELKPVDLL 754
S +S W++ IQ +S F + +LT F R +++ + + T+ +G ++ ++
Sbjct: 855 SGLSKWVRQQIQHHSTFASALESLTEFSKRHQKVTNRSKKEEKCTKENGSTLDVACLEGS 914
Query: 755 DKISLEEVPSSTP 767
S+ E TP
Sbjct: 915 TLTSVSEASHQTP 927
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+ Y I G+ + FP AY QL M +++ L + + LLESPTG+GK+L LLC+ LAW+
Sbjct: 5 LSEYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQ 64
Query: 61 KSL 63
+SL
Sbjct: 65 QSL 67
>gi|334322387|ref|XP_001363088.2| PREDICTED: Fanconi anemia group J protein [Monodelphis domestica]
Length = 1179
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 213/701 (30%), Positives = 345/701 (49%), Gaps = 82/701 (11%)
Query: 71 SQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSR 129
SQV++ I+ + G K+P I + +RTH Q+ Q+ +EL+ ++Y +M IL SR
Sbjct: 176 SQVDDNITKKE------HGGKFKIPKIFFGTRTHKQIAQITRELRRTSYSGVRMTILSSR 229
Query: 130 EQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP-----ID 184
+ C+H EV+ G+ N G N + + + M L P D
Sbjct: 230 DHTCVHPEVT---GNFNRNEKCMELMDGKNGKSCYFNHGVHKMSEQQALQTFPGMCRAWD 286
Query: 185 IEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH 244
IEDLV++G+ CPY+ REL DIVF PYNYL+D R+ + + K I+I DEAH
Sbjct: 287 IEDLVSLGKKLKACPYYAARELMLDADIVFCPYNYLLDSQIRESMDINLKEQIIILDEAH 346
Query: 245 NLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKL 304
N+E ++AS+ ++ L E + + + ++ LRA+ L
Sbjct: 347 NIEECARESASYSVTEIQLRFARDELDSMVSNNIRKKDHEP-----------LRAVCYSL 395
Query: 305 EKRIAEVPINSKELGFTKP-----GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK 359
+ E + +E + G + L + IT T L A L +E+K
Sbjct: 396 LNWLQENSKHLEERDYESSCKVWSGNEMISHLYKMGITAATFPILQG--HFTAVLQKEEK 453
Query: 360 --LQNKKS----------TTACRIESISNILKIIFRD--------KGTAHSAYYRVHVRE 399
L N K +T ++ + +L +FR K Y +
Sbjct: 454 FMLLNGKEQVKEIPIVSPSTQIMLKGLFMVLDYLFRQNSRFADDYKVAIQRTYSWTQIDI 513
Query: 400 ADANAADVLKGKASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSF 451
D N + R+ L++WC NP +A + S +V +I+LTSGTLSPM+SF
Sbjct: 514 PDKNGFFAIPKNKKRSRQKMAVHVLNFWCLNPAVAFLDISS-KVRTIVLTSGTLSPMNSF 572
Query: 452 AQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNI 511
+ EL + F +++E HVI + Q+W G + GP G L +++++ ++ ++ E+G ++++
Sbjct: 573 SSELGVTFAIQLEANHVIQNSQVWVGTIGSGPKGRNLCATFQHTETFAFQDEVGALLLSV 632
Query: 512 ARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEP--RQSSLFPL 569
+ V G+L F PSY L+++ W +T +W + K + EP + + F
Sbjct: 633 CQTVGQGILCFLPSYKLLEKLKERWIHTG------LWNNLELVKTVITEPPRAEKAAFDE 686
Query: 570 AIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
++ Y +K GA+ AVCRGKVSEGLDF+D RAV+ G+PF M D +V LK
Sbjct: 687 VLQVYYDAIKCKGDRDGALLMAVCRGKVSEGLDFSDENARAVITIGIPFPNMKDLQVELK 746
Query: 629 REYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
R+Y D ++ +G L G WY QA RA+NQA+GR IRH++D+GA+I D+R
Sbjct: 747 RKYNDQHSKLRG---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDR 797
Query: 689 F-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
F ++P R S +S W++ I+ ++ F + +L F ++ +
Sbjct: 798 FRSNPDRYISGLSKWVRQQIKHHTTFESALKSLAVFSKKHQ 838
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YIIGGVKIHFPCKAYPSQLALMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
Query: 64 GSFSTLGSQVNNQISG-SQSSVNSSQSGDSKL 94
ST + ++S Q+S+ S + D ++
Sbjct: 68 SEDSTPKITLAAKLSAKKQASLLSDEKDDFQI 99
>gi|109488700|ref|XP_340870.3| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
gi|109491562|ref|XP_001081096.1| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
Length = 1166
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 219/733 (29%), Positives = 369/733 (50%), Gaps = 76/733 (10%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S ++V SK P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 226 SANTVKKDNGDQSKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEV 285
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP----HLGDEPIDIEDLVNIGRT 194
+ +N C L + C + V H + DIE+LV++GR
Sbjct: 286 --VGNFNRNEKCMELLDGKHGKSCYFYHGVHRISNQQTLQFLHGISKAWDIEELVSLGRK 343
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + ++ K ++I DEAHN+E + A
Sbjct: 344 LKACPYYTARELIDSADIIFCPYNYLLDSQIRESMDIKLKEQVVILDEAHNIEECARETA 403
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA----- 309
S+ ++ L E + I+ S+ R+ S E L + ++ L + +
Sbjct: 404 SYSVTEVQLRFARDELDSLIN-SNIRK--KSHEPLRDVCYNLINWLETNSKNLVERDYES 460
Query: 310 --------EVPINSKELGFTKPG-PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
E+ +N +G T P + + L+ + +E +V + +E+ +
Sbjct: 461 SCKIWSGNEMLLNLHRMGITAASFPVLQKHLSAVLQKEE---------KVTSTHGKEEAI 511
Query: 361 QNK--KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA----------DANAA-DV 407
Q ++T ++ + +L +FR K + + Y+V +++ D NA V
Sbjct: 512 QIPIISASTQIMLKGLFMVLDYLFR-KNSRFADDYKVAIQQTYSWTNQIAIFDKNALLPV 570
Query: 408 LKGK-------ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
K K L++WC NP +A + + +V +I+LTSGTLSP+ SF+ EL + F
Sbjct: 571 PKNKKHSRQKIGVNVLNFWCLNPAVAFSDIND-KVRTIVLTSGTLSPLKSFSSELGVTFN 629
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
+++E HVI++ Q+W G V GP G L +++++ ++ E++ E+G ++++ + V G+L
Sbjct: 630 IQLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGMLLLSVCQTVSQGIL 689
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKL 578
F PSY L+++ W T +W + K + EP+ + + F ++ Y +
Sbjct: 690 CFLPSYKLLEKLRERWI------FTGLWHSLESVKTVIAEPQGGEKTDFDELLQVYYDAI 743
Query: 579 K-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++
Sbjct: 744 KFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSK 803
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK- 695
+G L G WY QA RA+NQA+GR IRH++D+GA+I D+RF +P R
Sbjct: 804 LRG---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPDRYI 854
Query: 696 SQISLWIQPHIQCYSKFGDVVYTLTRFF-REERICGSTNLKLIKTEVSGDVRELKPVDLL 754
S +S W++ IQ +S F + +LT F R +++ + + T+ +G ++ ++
Sbjct: 855 SGLSKWVRQQIQHHSTFASALESLTEFSKRHQKVTNRSKKEEKCTKENGSTLDVACLEGS 914
Query: 755 DKISLEEVPSSTP 767
S+ E TP
Sbjct: 915 TLTSVSEASHQTP 927
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP AY QL M +++ L + + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|119595648|gb|EAW75242.1| hCG22751, isoform CRA_c [Homo sapiens]
Length = 784
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/313 (48%), Positives = 207/313 (66%), Gaps = 13/313 (4%)
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
+ LS+WCF+PG +M E R V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I
Sbjct: 15 GKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH 74
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
QIW G+VP GP G L+S++ R S E LG + NIAR+VP GLLIFFPSY +M++
Sbjct: 75 QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKS 134
Query: 533 IACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
+ W+ +L E + KP+ VEPR F I Y A++ ++GA F AV
Sbjct: 135 LEFWRAR---DLARKMEAL----KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAV 187
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
CRGK SEGLDF+D GR V++TG+P+ DP+V LK ++LD + + QGG + FL
Sbjct: 188 CRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FL 242
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
SG++WY QQASRAVNQA+GRVIRHR DYGA+ CD RFA ++Q+ W++PH++ Y
Sbjct: 243 SGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDN 302
Query: 712 FGDVVYTLTRFFR 724
FG V+ + +FFR
Sbjct: 303 FGHVIRDVAQFFR 315
>gi|299471115|emb|CBN78973.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 572
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 200/576 (34%), Positives = 285/576 (49%), Gaps = 97/576 (16%)
Query: 37 NALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV------------ 84
NALLESPTGTGKTLCLL A+LAW++ S Q++ + V
Sbjct: 3 NALLESPTGTGKTLCLLTASLAWQQR-NSAMVASKPAPTQLAYDERPVTDLSRPRHEQQP 61
Query: 85 ---NSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLL 141
N + I+Y SRTHSQL QV ELK + YRP++ +LGSR+QLC+H EVS +
Sbjct: 62 YQENKPALAAAMPSVIIYASRTHSQLGQVANELKNTVYRPRLSLLGSRDQLCVHEEVSQM 121
Query: 142 RGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNN--------------PHLGDEPIDIED 187
+G A+N+AC L K RRC +H D ++ P P DIE+
Sbjct: 122 KGGAKNHACSALVKA---RRCKYHRGTEDMVERAGGGGVVAGGGGSGPPDQSTVP-DIEE 177
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
LV++ + CPY++ R ++V PYNYL+DP R+G+ + W N+++IFDEAHNLE
Sbjct: 178 LVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGTRRGIKINWSNAVVIFDEAHNLE 237
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQSSDETLNPDNFAILRALLLKLE 305
+ +DA+SF+L+S + EA C ++ + + DN +++ L LE
Sbjct: 238 SVASDASSFELTSAQIAGAQEEALRCHNLCTEGGVDEEGGGGATQADNALLVKQALHLLE 297
Query: 306 KRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKS 365
+ V + + GFT+ G Y+Y L IT +TA + ++ ++ LQE+ L +
Sbjct: 298 DAMEGVKLPASGKGFTQKGEYVYALFEHAGITFDTAQAWLGKLQDMSDTLQENALYGQ-- 355
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGK-------------- 411
A +++ +S +K F A RV R + + A G
Sbjct: 356 ANALKVDVVSRSIKGGFGGG-NASGEGGRVFARMSRWHMASAGGGSPLDGRGGGKGGKGG 414
Query: 412 --------------ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
A R +WCF PG+AMQ+ L V SII+TSGTLSP+ SF EL+L
Sbjct: 415 VGVGGGGGGGGGGGAGRVFCFWCFCPGVAMQDLKALGVRSIIVTSGTLSPLSSFGNELRL 474
Query: 458 NFPLRVENPHVITSKQI------------------------------WAGIVPVGPSGYL 487
F ++VENPHVI +Q W G + GP+
Sbjct: 475 PFEVQVENPHVIGPEQTPLAGLLQAMSPRSSAWWPVGPSETKGKAKAWIGTLGRGPTSVT 534
Query: 488 LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
LNSSY NRD+ YK ELG T+ N+ RIVP G+L+FF
Sbjct: 535 LNSSYANRDNDNYKDELGATLANLCRIVPGGVLVFF 570
>gi|345805276|ref|XP_852649.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Canis lupus familiaris]
Length = 1247
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 211/690 (30%), Positives = 353/690 (51%), Gaps = 71/690 (10%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S ++ G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 228 SSNTTKKDHGGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEV 287
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD------EPIDIEDLVNIG 192
+ +N C L + C + V + +N H + DIE+LV++G
Sbjct: 288 --VGNFNRNEKCMELLDGKNGKSCYFYHGV--HKISNQHTLQTLQGMCKAWDIEELVSLG 343
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
+ CPY+ REL + I+F PYNYL+D R+ + + K ++I DEAHN+E +
Sbjct: 344 KKLKACPYYTARELIEDAHIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCARE 403
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
+AS+ ++ L E + ++ + ++ E L ++++ L E +
Sbjct: 404 SASYSVTEVQLRFARDELDSMVNNNIRKKNH---EPLRAVCYSLINWLEANSEHLVERDY 460
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTAC 369
+S ++ G + L + IT TA I +A L +E+K + K+ T
Sbjct: 461 ESSCKIW---SGSEMVLNLHKMGIT--TATFPILQGHFSAVLQKEEKVLPIHGKEETREV 515
Query: 370 RIESISN---------ILKIIFRDKGTAHSAYYRVHVREADA------------------ 402
I S S + +FR + + + Y+V +++ +
Sbjct: 516 PIISASTQIMLKGLFMVFDYLFR-QNSRFADDYKVAIQQTYSWINQTDTSDKNGFFAPAK 574
Query: 403 NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
N + + A L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F ++
Sbjct: 575 NKKHLRQKTAVHVLNFWCLNPAVAFSDING-KVLTIVLTSGTLSPMKSFSSELGVTFTIQ 633
Query: 463 VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
+E HVI + Q+W G + GP G L +++++ ++ E++ E+G ++++ + V G+L F
Sbjct: 634 LEANHVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLLSVCQTVNQGILCF 693
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK- 579
PSY L+++ W T +W + K +VEP+ + + F ++ Y +K
Sbjct: 694 LPSYKLLEKLKERWL------YTGLWHNLELVKTVIVEPQGGEKTDFNELLQVYYDAIKY 747
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++ +
Sbjct: 748 KGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDQHSKLR 807
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQ 697
G L G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++PSR S
Sbjct: 808 G---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISG 858
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+S WI+ IQ +S F + +L+ F R+ +
Sbjct: 859 LSKWIRQQIQHHSTFESALESLSDFSRKHQ 888
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 45/60 (75%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+TLAW++S+
Sbjct: 8 YTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSTLAWQQSV 67
>gi|395845987|ref|XP_003795698.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Otolemur garnettii]
Length = 1234
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 210/694 (30%), Positives = 357/694 (51%), Gaps = 73/694 (10%)
Query: 79 GSQSSVNSSQ---SGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCI 134
SQ S N+++ G K+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+
Sbjct: 224 NSQESSNTTKKDHGGKFKIPKIYFGTRTHKQIAQITKELRRTAYSGVPMTILSSRDHTCV 283
Query: 135 HREVSLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLG-DEPIDIEDLVN 190
H EV + +N C L + C + +++D G + DIE+LV+
Sbjct: 284 HPEV--VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTLQGMSKAWDIEELVS 341
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ REL DI+F PYNYL+D R+ + + K ++I DEAHN+E
Sbjct: 342 LGKKLKACPYYTARELIGDADIIFCPYNYLLDSQIRESMDLNLKEQVVILDEAHNIEDCA 401
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI-- 308
++AS+ ++ L E + ++ + ++ E L +++ L E I
Sbjct: 402 RESASYSVTEVQLRFARDELDSLVNNNIRKKDH---EPLRAVCCSLINWLEANSEHLIER 458
Query: 309 -----------AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
+E+ +N +G T I + + +E I E A E
Sbjct: 459 DYESSCKIWSGSEMLLNLHRMGITTATFPILQGHFSAVLQKEEKVSAIYGKEEARE---- 514
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA-----DANAAD------ 406
+ ++T ++ + +L +FR + + + Y++ +++ + N +D
Sbjct: 515 --VPIISASTQIMLKGLFMVLDYLFR-QNSRFADDYKIAIQQTYSWINETNTSDKNMLVA 571
Query: 407 VLKGKASRT--------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN 458
+L R+ L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL +
Sbjct: 572 LLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDING-KVRTIVLTSGTLSPMKSFSSELGVT 630
Query: 459 FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
F +++E HVI + Q+W G + GP G L +++++ ++ E++ E+G ++++ + V G
Sbjct: 631 FTIQLEANHVIKNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLLSVCQTVSQG 690
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMA 576
+L F PSY L+++ W +T +W + K +VEP+ + + F ++ Y
Sbjct: 691 ILCFLPSYKLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKTNFDELLQLYYD 744
Query: 577 KLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
+K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D
Sbjct: 745 AIKFKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRKYNDHH 804
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSR 694
++ +G LSG WY QA RA+NQA+GR IRHR+D+GA+I D+RF ++P+R
Sbjct: 805 SKLRG---------VLSGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRSNPNR 855
Query: 695 K-SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
S +S WI+ IQ +S F + +L F ++ +
Sbjct: 856 YISGLSKWIRQQIQHHSTFESALESLAEFSKKHQ 889
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKINFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|297609925|ref|NP_001063870.2| Os09g0551800 [Oryza sativa Japonica Group]
gi|255679120|dbj|BAF25784.2| Os09g0551800 [Oryza sativa Japonica Group]
Length = 1187
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 213/665 (32%), Positives = 335/665 (50%), Gaps = 82/665 (12%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATLA 58
Y++ G+ VEFP++ Y QL +M +VI +L Q + +ALLESPTGTGK+L LLC+ LA
Sbjct: 25 YQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALA 84
Query: 59 WRK----------SLGSFSTLGSQVNNQISGSQS-SVNSSQSGDSKLPTILYTSRTHSQL 107
W++ + F G V + + V + +PTI Y +RTH+Q+
Sbjct: 85 WQRHYPLRAPPAAAPDPFLHGGGFVPDDTQKQATPGVPEKATRKKNVPTIYYATRTHAQI 144
Query: 108 RQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
QV++E + ++YR +M IL SR+ C+++ V + + C+ L + + C + +
Sbjct: 145 TQVVREYRKTSYRVRMAILASRKHYCVNKNVCM--SGNIDELCKSLLDD-SAQGCPEY-K 200
Query: 168 VADYMKNNPHLG----DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
A + +P L E DIEDLV +GR CPYF + + + +VF PYNYLI P
Sbjct: 201 NAQKLSRHPSLQIGGCYEVHDIEDLVRVGRKVKGCPYFAAQTMAEAAQLVFCPYNYLISP 260
Query: 224 WFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ 283
R+ + ++ + SI++ DEAHN+E I DA SFD+ + ++ + + G
Sbjct: 261 IVRRAMDIDIRGSIIVLDEAHNIEDIARDAGSFDV----------DEESLLFLRQELEGL 310
Query: 284 SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIY--ELLADLNITQETA 341
+DE + + L ++ L I E N ++ F P + E + +L T
Sbjct: 311 VTDEAV-AKIYEPLHEVIQGLNGWIDEQGNNLQKNEFEHPASFWTGEEAMKELKYAGITP 369
Query: 342 YKLIDIVEVAAELLQ-----EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVH 396
+ E A + ++ E + + +A +ES+ + L F + G HS Y++
Sbjct: 370 VNFPVLQECATKAIKAASDAESEGVHLSGGSAMTLESLFSSLSYFFAENGR-HSNDYQLA 428
Query: 397 VR---EADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ 453
++ + + N+ G +S WC NP + ++ + L + S+ILTSGTLSPM SFA
Sbjct: 429 LQRFAKREGNSVTSFIGWKC-VMSLWCLNPAVVFRDIADLTL-SVILTSGTLSPMGSFAS 486
Query: 454 ELKLNFPLRVENPHVITS-KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
EL + F +E PHVI + Q++A ++ GP+G LN+SYR + ++ ELG T+ I
Sbjct: 487 ELGVQFEACMEAPHVINADSQVFATVLSSGPTGRRLNASYRTANEYSFQDELGATLEEIC 546
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS--LFPLA 570
R+VP G L+FFPSY L+++ W T W R+ K VEPR S+ L P+
Sbjct: 547 RVVPGGALVFFPSYNLLEKLQRRWSQTGQ------WARLEAQKHVCVEPRGSTEELEPVL 600
Query: 571 IEDYMAKL-------------------------KDTSTSGAVFFAVCRGKVSEGLDFADH 605
Y A L ++++ GA F AVCRGKVSEG+DF+D
Sbjct: 601 KGYYNAILGKAPPKKGRGGAKQIVKNRVTKDSSQESAKGGAAFLAVCRGKVSEGIDFSDD 660
Query: 606 AGRAV 610
R V
Sbjct: 661 KARVV 665
>gi|390352857|ref|XP_001196422.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 204/310 (65%), Gaps = 15/310 (4%)
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
MQE V SIILTSGTL+P++SF EL ++FP+++ENPHVI Q+ G++ GP G
Sbjct: 1 MQELYSQGVRSIILTSGTLAPLNSFKSELSIDFPIQLENPHVIDKHQMVVGVMTKGPDGT 60
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
+LNSSY+ R EY LGN IVN AR+VP+GLL+FFPSY +M+ I W+ + N
Sbjct: 61 VLNSSYQTRFKKEYVLSLGNAIVNFARMVPNGLLVFFPSYPVMNHAIEIWQESGVSN--- 117
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
RI ++K+ +EPR F A+E + +++D + +GA FFAVCRGKVSEGLDFAD+
Sbjct: 118 ---RITQYKEMFIEPRGKRDFKEAMESFYERVRDPTLNGAAFFAVCRGKVSEGLDFADNN 174
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GRAVVITG+PF DP+V LK +YLD E K LSG+ WY QQASRAVN
Sbjct: 175 GRAVVITGLPFPPRKDPRVMLKMQYLD--------EAKRRNPQGLSGQMWYRQQASRAVN 226
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE- 725
QA+GRVIRHR D+GAI+ CD RF + ++Q+ W++PH+ Y KFG V L FF+
Sbjct: 227 QAIGRVIRHRQDFGAILLCDTRFTNSEARAQLPSWVRPHLTVYDKFGQGVRDLMNFFKVC 286
Query: 726 ERICGSTNLK 735
E++ LK
Sbjct: 287 EKVMPKPKLK 296
>gi|119595652|gb|EAW75246.1| hCG22751, isoform CRA_f [Homo sapiens]
Length = 865
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/313 (48%), Positives = 207/313 (66%), Gaps = 13/313 (4%)
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
+ LS+WCF+PG +M E R V S+ILTSGTL+P+ SFA E+++ FP+ +ENPH+I
Sbjct: 15 GKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKH 74
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
QIW G+VP GP G L+S++ R S E LG + NIAR+VP GLLIFFPSY +M++
Sbjct: 75 QIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKS 134
Query: 533 IACWKNTSHGNLTTIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
+ W+ +L E + KP+ VEPR F I Y A++ ++GA F AV
Sbjct: 135 LEFWRAR---DLARKMEAL----KPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAV 187
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
CRGK SEGLDF+D GR V++TG+P+ DP+V LK ++LD + + QGG + FL
Sbjct: 188 CRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD-EMKGQGGAGGQ----FL 242
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
SG++WY QQASRAVNQA+GRVIRHR DYGA+ CD RFA ++Q+ W++PH++ Y
Sbjct: 243 SGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDN 302
Query: 712 FGDVVYTLTRFFR 724
FG V+ + +FFR
Sbjct: 303 FGHVIRDVAQFFR 315
>gi|74138560|dbj|BAE41179.1| unnamed protein product [Mus musculus]
gi|74216986|dbj|BAE26603.1| unnamed protein product [Mus musculus]
Length = 898
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 223/704 (31%), Positives = 358/704 (50%), Gaps = 85/704 (12%)
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSRE 130
Q NNQ + +V G K P I + +RTH Q+ Q+ +EL+ + Y M IL SR+
Sbjct: 226 QGNNQEPAN--TVKKDHGGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRD 283
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP--HLG--DEPIDIE 186
C+H EV + + C L + C + V HL DIE
Sbjct: 284 HSCVHPEV--VGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIE 341
Query: 187 DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+LV++GR CPY+ REL + DIVF PYNYL+D R+ + ++ K ++I DEAHN+
Sbjct: 342 ELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNI 401
Query: 247 EGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK 306
E ++AS+ ++ L E + I+ G ++ P LR + L
Sbjct: 402 EDCARESASYSVTEVQLRFARDELDSLIN------GNIRKKSHEP-----LRDVCYNL-- 448
Query: 307 RIAEVPINSKEL---GFTKP-----GPYIYELLADLNITQETAYKLIDIVEVAAELLQED 358
I + NSK L G+ G + L + IT TA + ++A L +E+
Sbjct: 449 -INWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT--TATFPVLQRHLSAVLQKEE 505
Query: 359 K---LQNKK---------STTACRIESISNILKIIFRDKGTAHSAYYRVHVRE------- 399
K + K+ ++T ++ + +L +FR+ + + Y+V +++
Sbjct: 506 KVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRE-NSRFADDYKVAIQQTYSWTNQ 564
Query: 400 -ADANAADVL----KGKASR------TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPM 448
A + VL K SR L++WC NP +A + + +V +I+LTSGTLSP+
Sbjct: 565 IAIFDKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAVAFSDIND-KVRTIVLTSGTLSPL 623
Query: 449 DSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTI 508
SF+ EL + F +++E HVI++ Q+W G V GP G L +++++ ++ E++ E+G +
Sbjct: 624 KSFSSELGVTFSIQLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGMLL 683
Query: 509 VNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSL 566
+++ + V G+L F PSY L+++ W T +W + K + EP+ + +
Sbjct: 684 LSVCQTVSQGILCFLPSYKLLEKLRERWI------FTGLWHSLESVKTVIAEPQGGEKTD 737
Query: 567 FPLAIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKV 625
F ++ Y +K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V
Sbjct: 738 FDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQV 797
Query: 626 RLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFC 685
LKR+Y D ++S+G L G WY QA RA+NQA+GR IRH++D+GA+I
Sbjct: 798 ELKRQYNDHHSKSRG---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILV 848
Query: 686 DERF-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
D+RF +P+R S +S W++ IQ +S F + +LT F R +
Sbjct: 849 DDRFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEFSRRHQ 892
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+ Y I G+ + FP AY QL M +++ L + + LLESPTG+GK+L LLC+ LAW+
Sbjct: 5 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQ 64
Query: 61 KSL 63
+SL
Sbjct: 65 QSL 67
>gi|47224934|emb|CAG06504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 862
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 220/694 (31%), Positives = 334/694 (48%), Gaps = 122/694 (17%)
Query: 88 QSGDSKLPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQ 146
Q+ + ++P I + +RTH Q+ QV EL+ + Y R M IL SR+ C++ EV+ S +
Sbjct: 224 QNSNQRVPKIFFGTRTHKQITQVAHELRRTVYSRVPMTILSSRDHTCVNPEVA--PHSKR 281
Query: 147 NNACRFLCKKGTNRRCNHHSRVA----DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFM 202
N C+ + R C+++ V Y H E DIEDLV++G+ C YF
Sbjct: 282 NELCKERLEAKDGRSCHYYHGVQKMGEQYQLQRVHGLCEAWDIEDLVSLGKRLRSCSYFA 341
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK----------NSILIFDEAHNLEGICAD 252
REL DIV PYNYL+DP R+ + +E + IL+ DEAHN+E +
Sbjct: 342 ARELMMDADIVLCPYNYLLDPLIRESVSLEEQLEEMMDINLSGQILVLDEAHNIEDCARE 401
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
+ASF L+ L + E ++ I + PD LRA L I E
Sbjct: 402 SASFTLNYDSLLSSRDELESMIR-----------NNIRPDKHEPLRAFCYSLINWIQESQ 450
Query: 313 INSKELGFTKP-----GPYIYELLADLNITQET----AYKLIDIVE----VAAELLQEDK 359
E G+ G + ++ +L IT T KL+ ++E + +ED
Sbjct: 451 SLLSERGYESASKVWSGRDMVDIFHNLGITSATFNILKQKLMAVLEKEERIGVVNGREDL 510
Query: 360 LQ--NKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA---------DANAADVL 408
+Q S T+ ++ + +L +FRD + YRV ++ + DA A
Sbjct: 511 VQVPTISSATSIVLKGLFMVLDYLFRD-SCRFAEDYRVALQRSFAWTNQVPPDAPDAQGF 569
Query: 409 KGKASR-------------TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL 455
G+ + T+S+WC NP +A + V SI+LTSGTLSPM SF+ EL
Sbjct: 570 FGRPHQRQRRSIRVKSEVLTVSFWCLNPAVAFSDLGD-AVRSIVLTSGTLSPMASFSSEL 628
Query: 456 KLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIV 515
+ F +++E HVI Q+W G V GP G L ++++ ++ ++ E+G ++++ +++
Sbjct: 629 GVKFSIQLEANHVINKSQVWVGTVGAGPHGKKLCATFQQAETYTFQDEVGALLLHVCQVM 688
Query: 516 PDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
G+L F PSY T ++ I KH E R
Sbjct: 689 TKGVLCFLPSY------------------KTYYDAI-KH----CEER------------- 712
Query: 576 AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
GA+ AVCRGKVSEGLDF D RAVV G+PF + D +V LK +Y D
Sbjct: 713 --------DGALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDHH 764
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
A+S+G LSG WY QA RA+NQA+GR IRHR+D+GA+I DER+ + K
Sbjct: 765 ARSRG---------LLSGHRWYEIQAYRALNQALGRCIRHRNDWGALILVDERYKNNPNK 815
Query: 696 --SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+ +S W++ +Q + F + + +L F RE++
Sbjct: 816 YITGLSKWVRQLVQHHDTFSNAMQSLVVFSREQQ 849
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
Y I G+ + FP +AY QL M +I+ L + LLESPTG+GK+L LLC+ L W+++
Sbjct: 8 YTIGGVKIHFPCKAYPSQLAMMNSIIRGLNAGNHCLLESPTGSGKSLALLCSALGWQRA 66
>gi|348567428|ref|XP_003469501.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Cavia porcellus]
Length = 1209
Score = 310 bits (793), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 211/704 (29%), Positives = 349/704 (49%), Gaps = 85/704 (12%)
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSRE 130
Q NNQ S +++ G K P I + +RTH Q+ Q+ +EL+ + Y M IL SR+
Sbjct: 223 QGNNQ--ESSNTIKKDHGGKFKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRD 280
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHH---SRVADYMKNNPHLG-DEPIDIE 186
C+H EV + +N C L + C + ++++D G + DIE
Sbjct: 281 HTCVHPEV--VGNFNRNEKCMELLDGKNGKSCYFYHGVNKISDQHTFQALQGMHKAWDIE 338
Query: 187 DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+LV++GR CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+
Sbjct: 339 ELVSLGRKLKACPYYTARELTEGADIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNI 398
Query: 247 EGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK 306
E ++AS+ ++ L E + + + +R E L +++ L E
Sbjct: 399 EDCARESASYSVTEVQLRFARDELDSMVSNNIRKRDH---EPLRAVCCSLINWLEANTEH 455
Query: 307 RIA-------------EVPINSKELGFTKPG-PYIYELLADLNITQETA---YKLIDIVE 349
+ E+ +N ++G T P + + + +E Y + VE
Sbjct: 456 LVERDYESSCKIWTGNEMLLNLYKMGITAATFPILQGHFSSVLQKEEKVSPIYGKEETVE 515
Query: 350 VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY---------YRVHVREA 400
V ++T ++ + +L +FR Y + H +
Sbjct: 516 VPI----------ISASTQIMLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTHHTDMS 565
Query: 401 DANAADVL-KGKASR------TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ 453
D + VL K K SR L++WC NP +A + + V +I+LTSGTLSPM+SF+
Sbjct: 566 DKSEFFVLPKNKRSRQKIAVHVLNFWCLNPAVAFSDING-RVRTIVLTSGTLSPMNSFSS 624
Query: 454 ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
EL + F +++E HVI + Q+W G + GP G L +++++ ++ E++ E+G ++++ +
Sbjct: 625 ELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLCATFQHIETFEFQDEVGALLLSVCQ 684
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAI 571
V G+L F PSY L+++ W +T +W + K +VEP+ + + F +
Sbjct: 685 TVGQGILCFLPSYKLLEKLKERWISTG------LWHNLELVKTVIVEPQRGEKTDFDELL 738
Query: 572 EDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKRE 630
+ Y +K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+
Sbjct: 739 QVYYDAIKYRGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRK 798
Query: 631 YLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA 690
Y D ++ +G L G WY QA RA+NQA+GR IRH++D+GA+ D+RF
Sbjct: 799 YNDHHSKLRG---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALFLVDDRF- 848
Query: 691 HPSRKSQ-------ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
R +Q +S W++ IQ +S F + +L F ++ +
Sbjct: 849 ---RSTQALYISXGLSKWVRQQIQHHSTFESALESLAEFSKKHQ 889
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L ++ + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKINFPCKAYPSQLAMMNCIVRGLNSRQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|294887329|ref|XP_002772055.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
gi|239875993|gb|EER03871.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
Length = 946
Score = 309 bits (791), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 210/658 (31%), Positives = 349/658 (53%), Gaps = 55/658 (8%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQNNACR 151
+P I+Y+SRTHSQLRQV++EL++++Y + + L SRE C++ +S ++GS + AC
Sbjct: 123 VPKIVYSSRTHSQLRQVMRELRSTSYAKDCQHITLASREHYCVNTRISAIQGSRKTAACT 182
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGDEP-IDIEDLVNIGRTFGPCPYFMTRELQK-- 208
L K C +++R+ M P + P +D+E+L + R G CP++ R++ +
Sbjct: 183 SLILKNA---CPYYNRMWQ-MNETPSMIPPPALDVEELTSHARGKGYCPFYYARKVAREG 238
Query: 209 -TVDIVFAPYNYLIDPWFRKG-LGVE-WKNSILIFDEAHNLEGICADAASFDLSSGLLTA 265
+ + PYNYL D KG LG + + +I+I DE HN+E +C ++ASF+ + + A
Sbjct: 239 SNLGCMLVPYNYLFDLSALKGALGPQALEGAIVIVDEGHNIEAVCEESASFEWGNFDIFA 298
Query: 266 CISEA-------KNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL 318
+ E N I + D++ + LLLK + E + S ++
Sbjct: 299 AVEEVDEAAYRCNNSPKILGLNVEHAPDDSPSAAPVTEDDLLLLKEDLMSLEATLTSADI 358
Query: 319 GFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIES--ISN 376
G + + IT +T ++ +E A L TTA ++ SN
Sbjct: 359 VTATEGSAVLDFFKQAGITDQTVTRIRSTLEGAISLFH---------TTAPEADAGGHSN 409
Query: 377 ILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS-------WWCFNPGIAMQE 429
+ G ++ R+ + AN ++L KASR S + CF+ G+A ++
Sbjct: 410 NNTLGAASSGAFLGSFLRI-IDLVFANDIELLD-KASRRTSVLNRNGRFRCFSGGVAARK 467
Query: 430 FSRLE-VGSIILTSGTLSPMDSFAQELK-LNFPLRVENPHVITSKQIWAGIVPVGPSGYL 487
E + S+I+TSGTL+P+ F + L+ ++FP+ +EN H+I IW GI+ GP+
Sbjct: 468 LLASEGILSLIVTSGTLAPLTEFKRGLRGVDFPIMLENDHII----IWGGIICAGPTNVK 523
Query: 488 LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTI 547
LN S+R R+S +Y QELGN + N+A DG+L+ F SY + W SH ++T
Sbjct: 524 LNGSFRARNSHDYLQELGNVLANVAPKAGDGVLVAFSSYAQLRTAKDFWD--SH-DITNR 580
Query: 548 WERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
+++ + + EP ++ + +Y A + S +GA+ AVCRGKV EG+D D
Sbjct: 581 FQQ--RGLRIFEEPNDATRLRPVLAEYTAAIASNSCNGAILCAVCRGKVCEGVDLTDRQC 638
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
R V++ G+P+ D +V+LK +YLD ++ E + G WY+ +A RAVNQ
Sbjct: 639 RIVMVVGIPYPMFKDERVQLKMQYLD---TARDIEDIQKGAHAPLGRAWYSLEAMRAVNQ 695
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
AVGR+IRH++D+GA++ CDERF S ++ W++P+++ Y FG + +LT+FF +
Sbjct: 696 AVGRIIRHKNDFGAVLLCDERFQ--SEAHRLPAWLRPYVKTYQAFGPAIGSLTQFFNQ 751
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 35/51 (68%), Gaps = 12/51 (23%)
Query: 25 MEKVIQSLQNKC------------NALLESPTGTGKTLCLLCATLAWRKSL 63
M KVI++LQ NALLESPTGTGKTLCLLCATLAWR+SL
Sbjct: 1 MTKVIETLQAAYSDPPKTGSPAVHNALLESPTGTGKTLCLLCATLAWRRSL 51
>gi|308802574|ref|XP_003078600.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
gi|116057053|emb|CAL51480.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
Length = 970
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 230/787 (29%), Positives = 371/787 (47%), Gaps = 123/787 (15%)
Query: 3 TYKIRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
T I G V+FP + + Q++ M +I++L K +A++ESPTGTGKTL LLC LAW+
Sbjct: 101 TRMIGGCQVKFPEGLDPHPAQMMTMSTIIRTLTRKEHAMIESPTGTGKTLALLCGALAWQ 160
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQ-------------------------------- 88
+ ++V SG ++V ++
Sbjct: 161 EK--------NKVEMMASGMTTAVERAKYEKARVEYLMQKCDPTRKKPPVCAQGPGWSAD 212
Query: 89 -------SGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHR----E 137
SG S P I SRTHSQL Q++ ELK + Y P+ +L SR+++C + E
Sbjct: 213 DEYFKPGSGSSMNPKIFICSRTHSQLGQILGELKRTGYSPRYSVLSSRQRMCQMQKNDAE 272
Query: 138 VSLLRGSAQNNACRFLCKKGTNRRC---NHHSRVADYMKNNPHLGDEPI-----DIEDLV 189
L GS + KK C N H+ V M+ P G + + D+ED
Sbjct: 273 CKQLIGSDEGK------KKTGTTGCPYYNKHTHVVRAMERYPLNGSQGMYPQAWDMEDFE 326
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGI 249
+ C +F R++ ++ D+VF PYNYL D R+ + +E + + +I DE HN+E +
Sbjct: 327 RVVDEVDGCSFFALRKMYESADVVFCPYNYLFDINIRRKMSIETEGACVIIDEGHNIEDV 386
Query: 250 CADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDET-LNPDNFAILRALLLKLEK-- 306
C + AS + S + EA +D S G + ET + D F + A L + +
Sbjct: 387 CREGASAEFS----LQAVGEA---MDALSKNLGHVNVETNMLADFFRSISAFLEDMFRTN 439
Query: 307 RIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKST 366
R I S ++ ++ E+L+ + A+ + + E +L+ K ++
Sbjct: 440 RAESTIIQSNQV-----PSFLQEMLSRF----DAAHDMATLSETVNDLMTT-KAKHLTPI 489
Query: 367 TACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIA 426
A I S++ L I T AY + + D N +D G + C P +A
Sbjct: 490 VAPHI-SLAGDLASIVTMASTQPEAYNVIFGMKVDIN-SDSCPG-----VIIQCMKPSVA 542
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
++ + S+ILTSGTLSPM +F EL + F ++E PHV+ ++ ++ + +G
Sbjct: 543 FNSVAK-KARSVILTSGTLSPMTTFEAELGVRFGAKIEAPHVVPNENVYVEV-----TGA 596
Query: 487 LLNSSYRNRDS----IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHG 542
L +Y+ +S + Q LGN ++ A+I+P G+L+FFP Y L+++ + W
Sbjct: 597 LGEITYKATESENAGRRFAQNLGNYLLRYAKIIPGGMLVFFPKYSLIERVVREW------ 650
Query: 543 NLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDF 602
+++ ++ ++ HK E R + F + + + + SG++ AV RGKVSEG+DF
Sbjct: 651 HMSGLFGQLNDHKFLCCETRGAKGFQETLNQFD---RGNTRSGSLMLAVYRGKVSEGIDF 707
Query: 603 ADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQAS 662
D RAV G+PF ++ DP+V+ K+E+ D Q G L+G +WY QA
Sbjct: 708 KDDKARAVFCVGIPFPSVFDPRVKAKKEFNDSPTSKQQG--------MLAGGEWYRAQAY 759
Query: 663 RAVNQAVGRVIRHRHDYGAIIFCDERFAHPS--RKSQISLWIQPHIQCYSKFGDVVYTLT 720
RA NQA+GR IRH DY A+ D RF + IS WI+ + + V ++
Sbjct: 760 RAYNQALGRCIRHPKDYAALFLVDARFREGGAWMLNNISKWIRNNTRASDDVNVSVRQVS 819
Query: 721 RFFREER 727
FF+ R
Sbjct: 820 AFFKRLR 826
>gi|339251144|ref|XP_003373055.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316969101|gb|EFV53261.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 1052
Score = 308 bits (788), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 219/745 (29%), Positives = 367/745 (49%), Gaps = 102/745 (13%)
Query: 31 SLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSG 90
+L +A++ SP G ++C+ RK++ FST SQ S+ NS+
Sbjct: 346 TLARGISAMVGSPLGE-----IICSPNCKRKNMDKFSTNKSQC--------SAANSAACQ 392
Query: 91 DSKLPTILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSREQLCIHREVS---------- 139
++P I Y +RTH QL Q+I+ELK + Y+ +M I+ SR+ C++ +V+
Sbjct: 393 KRRVPKIFYATRTHKQLSQMIRELKKTEYKNVRMTIMASRDFTCLNDKVNNHCDKAAACL 452
Query: 140 -------------LLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGDEPI 183
L++ + + ++ + R + S RV D + D
Sbjct: 453 QVKDVLEIFLQFLLIKNCSYYKGLQAFGQETSMLRKHVQSSKKRVKDIWEIIEENDDFAW 512
Query: 184 DIEDLVNIGRTFGPCPYFMTRE-LQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
DIE+LV GR CPYF + + + + +++F PY YLIDP R + K ++IFDE
Sbjct: 513 DIEELVEAGRKLNFCPYFASVDNMYQDANLIFCPYGYLIDPVVRSSSNINLKGQVIIFDE 572
Query: 243 AHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLL 302
AHN+E C + ASF ++ L + + ++ S ++L + ++++++
Sbjct: 573 AHNMEDECCEKASFQITKQELVDAVEYLSSIEELVP-----ESKKSLQDNCTELVKSVIE 627
Query: 303 KLEKR-IAEVPINSKELGFTK--PGPYIYELLADL-------NITQETAYKLIDIVEVAA 352
++K+ + E N E +TK G +Y L ++ NI Q+ K + +
Sbjct: 628 WIDKKSVIEEMTNHSEKFYTKIWSGRAMYAELQEMKLHYDAGNILQKAIQKFDSVFKPDN 687
Query: 353 EL-----LQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADV 407
L + E K N+ T +E + ILK I++D YR+
Sbjct: 688 SLNVTGTIFEKKHDNQPLTV---LEKLILILKYIYKD--------YRL------------ 724
Query: 408 LKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPH 467
+ T S+ C++ + S S+IL SGTL+P+ ++A EL L F +E PH
Sbjct: 725 -----TPTDSYDCYSYKFIFHDISS-SARSVILASGTLAPLKTYANELGLPFQYLLEAPH 778
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
VI ++W G VGP L ++Y+ S E++ ELG ++ I ++ PDG+L F PSY
Sbjct: 779 VILPDRVWIGATGVGPKHVPLKATYQLAQSTEFQDELGRLLIEICKVTPDGVLCFLPSYT 838
Query: 528 LMDQCIACWKNTSHG-NL---TTIWERICKHKKPVVEPRQS-SLFPLAIEDYMAKLKD-- 580
+D + WK N +++W ++ +K VVEPR++ S L ++ + +KD
Sbjct: 839 FIDCLLTRWKKVPPSCNFQVNSSLWSQLNVYKMVVVEPRKNGSDVRLIMDRFTETIKDPK 898
Query: 581 ---TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
+GA+ AV RGK+SEG+DFAD RAVV G+P+ M D ++RLK +Y + + +
Sbjct: 899 KVGPKCNGALLLAVYRGKISEGVDFADQQARAVVTVGIPYPDMEDMRIRLKIQYNNERLK 958
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
+ + L +SG WY QA RA+NQA+GR +RH+ D+GA++ D RF +
Sbjct: 959 NAKRIAEMAPL--ISGNQWYQAQAFRALNQALGRCLRHKLDWGALLLVDSRFQNAEYSCN 1016
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRF 722
+S WI+ +++CY +F ++ L F
Sbjct: 1017 LSTWIRKNLRCYDRFDQMICNLQTF 1041
>gi|357159919|ref|XP_003578599.1| PREDICTED: uncharacterized protein LOC100829852 [Brachypodium
distachyon]
Length = 1225
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 215/661 (32%), Positives = 317/661 (47%), Gaps = 90/661 (13%)
Query: 12 EFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATLAWRK----- 61
EFP++ Y QL +M +VI +L Q + +ALLESPTGTGK+L LLC+ LAW++
Sbjct: 38 EFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLR 97
Query: 62 ------SLGSFSTLGSQVNNQISGSQSSVNSSQSGDSK--LPTILYTSRTHSQLRQVIQE 113
+ F G V + Q++ + K PTI Y +RTHSQ+ QV++E
Sbjct: 98 APPAPPAADPFLHGGGFVPDDTQQQQATPGVPEKAAKKKNAPTIYYATRTHSQITQVVRE 157
Query: 114 LKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMK 173
L+ ++YR +M +L SR+ C+++ V + + C+ L + C + A +
Sbjct: 158 LRKTSYRVRMAVLASRKHYCVNKNVCM--SDNIDEQCKLLLDDKV-QGCPEF-KNAQKLS 213
Query: 174 NNPHLGD----EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL 229
+P L E DIEDL+ +GR CPYF + + +T +VF PYNYLI P R+ +
Sbjct: 214 RHPSLQKGGCYEVHDIEDLLRVGRQVKGCPYFAAQTMAETAQLVFCPYNYLISPIVRRAM 273
Query: 230 GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETL 289
++ SI+I DEAHN+E I DA S D+ LT E N + +
Sbjct: 274 DIDISGSIVILDEAHNIEDIARDAGSVDVDEESLTTLAGELANLATNEAVAK-------- 325
Query: 290 NPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPY------IYELL------ADLNIT 337
+ L ++ L I + N ++ F P + + EL A I
Sbjct: 326 ---IYQPLHEVIEGLINWITDQVGNLRDNEFEHPASFWTGENAMKELQKAGITPAYFPIL 382
Query: 338 QETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHV 397
QE A K V+ A++ + + + ++S+ + L F G Y
Sbjct: 383 QECATK---AVKAASDTESDGEYLTGRGVMT--LDSLFSSLSHFFAGNGCHFYDYQLAFQ 437
Query: 398 READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
+ + G S +S WC +P + Q S L + S+ILTSGTLSPM SFA EL +
Sbjct: 438 HFVQREGSSSVIGSRS-VMSLWCLSPAVVFQGISDLTL-SVILTSGTLSPMGSFASELGV 495
Query: 458 NFPLRVENPHVITS-KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
F +E PHVI + Q++A ++ GP+ Y LN+SY+ D ++ ELG +I I RIVP
Sbjct: 496 QFDACMEAPHVIDADSQVFASVISSGPTKYPLNASYKTADVYSFQDELGASIEEICRIVP 555
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS--LFPLAIEDY 574
G L+FFPSY L+D+ W T W R+ +K VEPR S+ L P+ Y
Sbjct: 556 GGALVFFPSYKLLDKMKVRWAQTGQ------WARLHANKPVFVEPRGSTEELEPILKGYY 609
Query: 575 MAKL-------------------------KDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
A L ++++ GA F AVCRGKVSEG+DF+D R
Sbjct: 610 DAILGKAPLKKGRGGAKQIVKNRVRKNSSQESAKGGAAFLAVCRGKVSEGIDFSDDNARV 669
Query: 610 V 610
V
Sbjct: 670 V 670
>gi|123437769|ref|XP_001309677.1| helicase [Trichomonas vaginalis G3]
gi|121891414|gb|EAX96747.1| helicase, putative [Trichomonas vaginalis G3]
Length = 859
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 216/726 (29%), Positives = 349/726 (48%), Gaps = 104/726 (14%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M+K I + +N ALLESPTGTGKTL LLC+TLAW++ Q + +
Sbjct: 1 MDKTIDACENGKFALLESPTGTGKTLSLLCSTLAWKE----------QTHYRCQ------ 44
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS 144
I+Y+SRTHSQL VI+ELK + ++P++ + SR+ LCI+ +
Sbjct: 45 ------------IVYSSRTHSQLSNVIEELKKTRFKPRVAHIASRKMLCINHTI----NK 88
Query: 145 AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTR 204
N LC +++ + + M N+ + DIE+ + CPYF +
Sbjct: 89 YDNFLITRLCHNLRSKKQCPYGIDENLMSNSNEVLTACSDIEEYIENCANHMICPYFAAQ 148
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGL-GVEWKNSILIFDEAHNLEGICADAASFDLSSGLL 263
+ D++ PY Y++DP R+ L ++LIFDEAHN C++A S +
Sbjct: 149 INSEQADLILTPYTYIVDPNVRQFLPSTTLVGNVLIFDEAHNFADTCSEAYSAKI---YF 205
Query: 264 TACISEAKNCIDISSTRRG---QSSDETLNPDNFAILRALLLKL------------EKRI 308
+ A + I R ++S +N ++ RA+L+ + E +
Sbjct: 206 KSFNDAALTLMKIEPNRFSNATRNSKAKVNGNDLLSTRAILMNIFQKCDTLENTDYEYKT 265
Query: 309 AEVPINSKE---LGFTKPGPYIYELLADLNITQETA---YKLIDIVEVAAELLQEDKLQN 362
A ++S L K +Y D +T+E + Y ++D+V + LQ L N
Sbjct: 266 ACESVSSSAKSVLYVKKTAEQLYAFFRDAGLTKENSRLVYSVLDLVVQKGDELQ--ILNN 323
Query: 363 KKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFN 422
+ + ++SI + + +IF + A V D+ + + +RT+S CF+
Sbjct: 324 EFGS----MQSIMSFIDLIFPNATEA--------VEMFDSKFSILFT--TNRTISIICFS 369
Query: 423 PGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVG 482
P IAM++ + ++ILTSGTLSP+ S EL+ FP+++E H+++ I G
Sbjct: 370 PSIAMKKVADFLPKTMILTSGTLSPLSSLEDELEYKFPIKLECNHIVSPDNFLVAIANSG 429
Query: 483 PSGYLLNSSYRN-RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH 541
SG N +Y+N R + + EL +++ ++ ++ P G L+FFPS+ MD+
Sbjct: 430 ISGQRFNFTYQNRRGNNRLESELVDSVTDVFKVSPSGALLFFPSFSYMDEVS-------- 481
Query: 542 GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLD 601
+I + K+ +E + + +E+Y K + GA AVCRG+ SEGLD
Sbjct: 482 ---RSISSNASRVKRIYIEAKDAVKQATVLENY----KRDAMKGAALLAVCRGRSSEGLD 534
Query: 602 FADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQA 661
F D R V + G+P+ T TD V LKRE+L+ + +G + WY + A
Sbjct: 535 FVDDFARFVGVVGIPYPTFTDYTVELKREWLENKKPGKGLK-------------WYTECA 581
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTR 721
RAVNQ++GR IRH DY AI+ DERF K Q+S W+Q I Y + + + +
Sbjct: 582 VRAVNQSIGRAIRHIDDYAAIVLFDERFT--GLKDQLSKWMQQSIYVYDDWSTLTTEIDQ 639
Query: 722 FFREER 727
FFR ++
Sbjct: 640 FFRAKK 645
>gi|294892654|ref|XP_002774167.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
gi|239879384|gb|EER05983.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
Length = 1036
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 203/651 (31%), Positives = 331/651 (50%), Gaps = 84/651 (12%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQNNACR 151
+P I+Y+SRTHSQLRQV++EL+ ++Y + + L SRE C++ +S ++GS + AC
Sbjct: 256 VPKIVYSSRTHSQLRQVMRELRGTSYAKDCQHITLASREHYCVNTRISAIQGSRKTAACT 315
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGDEP-IDIEDLVNIGRTFGPCPYFMTRELQK-- 208
L K C +++R+ M P + P +D+E+L + R G CP++ R++ +
Sbjct: 316 SLILKNA---CPYYNRMWQ-MNETPSMIPPPALDVEELTSHARGKGYCPFYYARKVAREG 371
Query: 209 -TVDIVFAPYNYLIDPWFRKG-LGVE-WKNSILIFDEAHNLEGICADAASFDLSSGLLTA 265
+ + PYNYL D KG LG + + +I+I DE HN+E +C ++ASF+ + + A
Sbjct: 372 SNLGCMLVPYNYLFDLSALKGALGPQALEGAIVIVDEGHNIEAVCEESASFEWGNFDIFA 431
Query: 266 CISEA-------KNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL 318
+ E N I + D++ + LLLK + E + S ++
Sbjct: 432 AVEEVDEAAYRCNNSPKILGLNVEHAPDDSPSAAPVTEDDLLLLKEDLMSLEATLTSADI 491
Query: 319 GFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNIL 378
G + + IT +T ++ +E A L TTA
Sbjct: 492 ITATEGSAVLDFFKQAGITDQTVTRIRSTLEGAISLFH---------TTA---------- 532
Query: 379 KIIFRDKGTAHSAYYRVHVREADANA---ADVLKGKASRTLSWWCFNPGIAMQEFSRLEV 435
EADA + L G A+R L + +
Sbjct: 533 -------------------PEADAGGHSNNNTLGGVAARKL-------------LASEGI 560
Query: 436 GSIILTSGTLSPMDSFAQELK-LNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
S+I+TSGTL+P+ F + L+ ++FP+ +EN H+IT Q+W GI+ GP+ LN S+R
Sbjct: 561 LSLIVTSGTLAPLTEFKRGLRGVDFPIMLENDHIITFDQVWGGIICAGPTNVKLNGSFRT 620
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+S +Y QELGN + N+A DG+L+ F SY + W SH ++T +++ +
Sbjct: 621 RNSHDYLQELGNVLANVAPKAGDGVLVAFSSYAQLRTAKDFWD--SH-DITNRFQQ--RG 675
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
+ EP + + + +Y A + S +GA+ AVCRGKV EG+D D R V++ G
Sbjct: 676 LRIFEEPNDAVNYIPVLAEYTAAIASNSCNGAILCAVCRGKVCEGVDLTDRQCRIVMVVG 735
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+ D +V+LK +YLD ++ E + G WY+ +A RAVNQAVGR+IR
Sbjct: 736 IPYPMFKDERVQLKMQYLD---TARDIEDIQKGAHAPLGRAWYSLEAMRAVNQAVGRIIR 792
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
H++D+GA++ CDERF S ++ W++P+++ Y FG + +LT+FF +
Sbjct: 793 HKNDFGAVLLCDERFQ--SEAHRLPAWLRPYVKTYQAFGPAIGSLTQFFNQ 841
>gi|330843781|ref|XP_003293824.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
gi|325075810|gb|EGC29655.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
Length = 617
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 331/643 (51%), Gaps = 49/643 (7%)
Query: 8 GIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW-RKSLGSF 66
G V+FPF+ Y Q M +++ L NK N LLESPTGTGKTL LLC+ L W R+ L
Sbjct: 1 GHTVKFPFKPYPSQASMMSRILSGLDNKENCLLESPTGTGKTLTLLCSALEWHREDLKKS 60
Query: 67 STLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVIL 126
+ + ++ + S+ V + + S PTI + SRTHSQ++Q+ +EL + YRP M+++
Sbjct: 61 NNNNNGSDSDDTDSEDPVENFRPNPS--PTIFFCSRTHSQIKQLTEELAKTPYRPNMLVM 118
Query: 127 GSREQLCIHREVSLL-------RGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLG 179
GSR+ CI++E+ + + ++ CR+ K+ S ++ + K
Sbjct: 119 GSRDHYCINKELKDVPRKKERCKKIIKDPGCRYYKKEFV------LSSISTFRKGG---A 169
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
+ DIEDL G+ CP+F+++++ + D+VF PYNYLIDP R L + KNSI+I
Sbjct: 170 KQVWDIEDLKKAGQEHSECPFFVSKDMLPSSDLVFCPYNYLIDPSIRSTLKDKVKNSIVI 229
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDN---FAI 296
FDEAHN+E DA+SF+ + L + + + R + L+P+ I
Sbjct: 230 FDEAHNIEDALMDASSFESTLDELYENVFQV-----LKQIRMNPKIIKNLSPEKEHAINI 284
Query: 297 LRALLLKLEKRIAEVPINSKELGFTK-----PGPYIYELLADLNITQETAYKLIDIVEVA 351
+ ++ +L I E + K + F K G I ++L + +++ ++ V+
Sbjct: 285 IHPIMDELVAWIREKSESLKPIDFEKHSRVWKGKEILDILQGIGLSESNYFEFSSSVKAL 344
Query: 352 AELLQEDKLQNKKSTT---ACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVL 408
++ + D QNKK + +E S +++ IF++ Y V ++ + V
Sbjct: 345 SD--ETDDKQNKKDKLGKPSAILEEFSKVIEFIFKNANWVDD-YVLVLQKQTVLTNSFVK 401
Query: 409 KGKASR---TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN 465
K ++S+ +S W +P IA + + SIILTSGTLSP+ SF EL FP+ E
Sbjct: 402 KQQSSKWNLIVSIWALSPRIAFSSLNS-KTHSIILTSGTLSPLYSFPFELASPFPISAEM 460
Query: 466 PHVITSK-QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
++ K + W G + G ++ N DS ++ LG TI+ +I+P G+L FFP
Sbjct: 461 GNLSDIKNRAWIGTLSHGVRNEKFLCTHGNTDSFSFQDSLGETIIEHIKIIPSGVLCFFP 520
Query: 525 SYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS 584
SY +++ W +T + ++I + K EP+ F + Y ++
Sbjct: 521 SYGFLEKITDRWASTG------LLDKINELKPAFAEPKNIKDFNETLIGYRQTVQSNPKK 574
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRL 627
GA+ FAVCRGKVSEG+DF+D R V++ G+P+ + D +V L
Sbjct: 575 GAILFAVCRGKVSEGIDFSDEYARGVIVVGIPYPNLKDLRVDL 617
>gi|68069879|ref|XP_676851.1| DNA repair helicase [Plasmodium berghei strain ANKA]
gi|56496730|emb|CAH94015.1| DNA repair helicase, putative [Plasmodium berghei]
Length = 939
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 227/774 (29%), Positives = 371/774 (47%), Gaps = 95/774 (12%)
Query: 106 QLRQVIQELKT-------SNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGT 158
QL+QVI+ELK Y+ ILGSR+QLC+H +G+ NN C+ + K G
Sbjct: 1 QLKQVIKELKNVYFIKNNEKYKLLTTILGSRDQLCVHNISYNYKGTMLNNMCKRVRKSG- 59
Query: 159 NRRCNHHSRVADYMKNNPHLGDEPIDIEDLV-------NIGRTFGPCPYFMTRELQKTVD 211
C +H+ + K HL P+D E L ++G+ CP++ TRE+Q
Sbjct: 60 --ECMYHNGLKHLYKY-KHLFTTPMDAETLNEMGKGNNSVGQNIHFCPFYATREIQNECH 116
Query: 212 IVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
++ PYNYL + R+ L ++ +N I+I DE HN+E + +A SF + L + K
Sbjct: 117 VILLPYNYLFEENTRRILKLDLENCIIIIDEGHNIENVAEEAVSFKIRDSDLNLFLESIK 176
Query: 272 NCIDISSTRRGQSSD--ETLNPDNFAILR----ALLLKLEKRIAEVPINSK--ELGFTKP 323
++I + + +N D IL +L+ L+ E K E T
Sbjct: 177 ATLNILEKVNDIDKEIQDKINVDELFILNRSINSLITWLDNERLERNDKKKIKERHKTYE 236
Query: 324 GPYIYELLADLNITQ-----ETAYKLI-DIVEVAAELLQEDKLQNKKSTTACR-IESISN 376
G I+++ + NI E L+ +++E+ + + + KL + I +I N
Sbjct: 237 GNKIFDIFENNNINISKSNFENFNNLLSNMIELLNKYINDFKLSQIDVKNVNKYIATIDN 296
Query: 377 ILK---IIFRDKGTAHSAYYRVHVREA-----DANAADVLKGKA---------------- 412
+ K I+F D Y+++++ E D+N + +
Sbjct: 297 VKKAFSILFSDIVKNCIEYFQLYINEEKVLYNDSNDPNKVYDHMKKFTKIKTKIGYDNQN 356
Query: 413 ----SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELK---LNFPLRVEN 465
S+T+S CF+ ++ + +V SII+TSGTLSP++ F+++L +F +EN
Sbjct: 357 NYTMSKTISLLCFSATASLCGIIKEKVNSIIVTSGTLSPVEPFSKQLSGSYFSFHHILEN 416
Query: 466 PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
HVI S Q++ G + + LL S+Y NR + Y + LGN I ++ +P G+LIFF S
Sbjct: 417 DHVIKSHQLFVGCMTHYNNQLLL-STYENRSNENYIKALGNCIFDVIAYIPFGVLIFFSS 475
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSG 585
Y M + +A WK I+++I +K VEP +++ + Y +K G
Sbjct: 476 YSSMTETVATWKKLK------IFDKINSYKTIFVEPNKAADLKDILFQYENIIK-KKRKG 528
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD----LQAQSQGG 641
A+ VCRGK+SEG+DF D R V+I G+P+ + D K+ KRE+LD +S
Sbjct: 529 AILMGVCRGKISEGIDFKDDCCRGVIICGLPYGNVYDSKIIFKREFLDNFKSEITESNNY 588
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
K + G WYN++A R++NQ++GRVIRH+ DYGAI+F D RF++ R +IS W
Sbjct: 589 SEKNNDNNISKGNKWYNEEAMRSINQSIGRVIRHKDDYGAILFLDSRFSNNQRIKEISKW 648
Query: 702 IQPHIQCYSKFGDVVYTLTRFFREERICGSTNLK-----LIKTEVSGDVRE--LKPVDLL 754
++ H + Y + + +FF E G +LK + +++SG+ + D
Sbjct: 649 VRAHFRVYRDIDQIQNDIEKFF--ELFKGINDLKTKQANINNSQISGEKQNGGYGMNDSF 706
Query: 755 DKISLEEVPSSTPAVD---QACYSLHEVKNRNTSSHSGEIVPANRSSLSPYKGI 805
+KI E S + Q CY ++N + H + N+ +P K I
Sbjct: 707 NKIGGNEESSIMKQIGKNFQDCY----IQNNKQNKHG---ISENKFVFNPTKKI 753
>gi|340503511|gb|EGR30093.1| regulator of telomere elongation helicase 1, putative
[Ichthyophthirius multifiliis]
Length = 671
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 211/655 (32%), Positives = 323/655 (49%), Gaps = 85/655 (12%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I GID+ FP+ Y Q++YM KVIQSL N+LL+SPTGTGKTLCLLCAT+AW K
Sbjct: 44 IDGIDIYFPYRPYPQQIMYMSKVIQSLNQGNNSLLQSPTGTGKTLCLLCATIAWLKKYRE 103
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLP--TILYTSRTHSQLRQVIQELKTSNYRPKM 123
+Q +P I+Y+SRTHSQ++QV++ELK + YRP++
Sbjct: 104 --------------------QNQENIDNVPPKKIVYSSRTHSQIQQVVKELKQTIYRPRI 143
Query: 124 VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD--- 180
+L SR+Q C+ +E L + C+ + N HS Y KN+ +L +
Sbjct: 144 TVLASRDQYCLKKEYQNLTDWTLISYCQ--------KAINEHS-CKFYQKNHENLEEIFS 194
Query: 181 -EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
+ +DIE+L G+ G CPYF +R ++ VDI+F PYNY+ D +E NSILI
Sbjct: 195 TDIMDIEELRQNGQKNGFCPYFHSRRVKDCVDIIFMPYNYIFDNQNASPFNIELTNSILI 254
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI-------SSTRRGQSSDE----- 287
FDEAHN+ I ++ SF ++ L A +E K +I ++ R+ + S +
Sbjct: 255 FDEAHNIAKIAEESTSFSITIKNLEAIETEIKLLREIIQSYKDPNTFRQKKESHKNKINK 314
Query: 288 ----------TLNPDNFAILRAL------LLKLEKRIAEVPINSKELGFTKPGPYIYELL 331
+ N D IL+ + L K + I + P NS+ + +K G I+++L
Sbjct: 315 LQEIDTQGLRSSNQDCDLILQHILPFKKYLQKFIENIQKNPENSETI-ISKEGRDIFQIL 373
Query: 332 ADLNITQETAYKLID--------IVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR 383
+ I + +D + E L+ LQ IE +S +
Sbjct: 374 ENNTIPIQLQENTLDTYFQENNNTFQQKKEGLKITNLQEYIKKLVMAIEDLSTT-----Q 428
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSG 443
+ G + V++ V + C +P ++ SI+LTSG
Sbjct: 429 NYGLDKWMLFLSKVQKLLC-VEKVEPENEQSEIYMQCLDPSVSFSFIKIKNPHSILLTSG 487
Query: 444 TLSPMDSFAQELKLNFPLRVENPHVITSKQ-IWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
TL+P DS+ ELK+ FP+ + N HVI +K+ + AGI GP L +Y+NR
Sbjct: 488 TLAPFDSWELELKIPFPIILNNQHVIDNKKNLLAGICIKGPLEQELEFTYQNRQKNLILD 547
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
++G T++N+ + +P+G+L+ F S C W+N H I ++ +HK+ EP+
Sbjct: 548 DVGLTLLNLCKFIPNGILVIFNSSSSYWNCRKQWENGEHK----IMNKLKEHKQLFFEPK 603
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
S +++Y K S GA+ FA+CRGKVSEG+DF D RAV + G+P+
Sbjct: 604 NSYEMNSFMKNYTQAAK--SKQGAILFAICRGKVSEGIDFYDELARAVFLIGVPY 656
>gi|260808249|ref|XP_002598920.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
gi|229284195|gb|EEN54932.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
Length = 1352
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 202/641 (31%), Positives = 320/641 (49%), Gaps = 100/641 (15%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSREQLCIHREVSLLRGSAQNNACR 151
+ P I + +RTH Q+ Q+ +EL + Y+ +M IL SRE CI+ + +RG+ +N+ CR
Sbjct: 223 RAPKIFFGTRTHKQIAQITRELGKTAYKGARMTILSSREHTCIN---ASIRGN-KNDGCR 278
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHL---GDEPIDIEDLVNIGRTFGPCPYFMTRELQK 208
L ++ C+ H V M N + G DIE+LV +G+ CPY+ REL
Sbjct: 279 ELLD---HKACSFHHNVV-RMSNQAQIQYRGLSAWDIEELVKLGKKIKACPYYSARELML 334
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
DIVF PYNYL+DP R+ + + KN +++ DEAHN+E +AASF ++ L C+S
Sbjct: 335 EADIVFCPYNYLVDPVIRENMQISLKNHVIVLDEAHNIEDSAREAASFSMTEDQLDNCMS 394
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK-----P 323
E +N + + D+ L + +K I + KE F +
Sbjct: 395 ELENLVL-----------HNVQMDDHRALHIVCGSFKKWIKDSSSLLKERDFERQTKVQT 443
Query: 324 GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK--------STTACRIESIS 375
G + +L + I +T + L+ ++A E+K + K+ S +A ++ +
Sbjct: 444 GMDMVAVLNTMGINPDT-FGLLK-KNLSAVTDPENKPEPKQGQEQMWLGSASAQMLKGMF 501
Query: 376 NILKIIFRDKGTAHSAYYRVHVREAD-ANAADVL--------KGKA-----SRTLSWWCF 421
+L +F++ Y V R + +N + KG+ S L +WC
Sbjct: 502 FVLGFLFKENMKFAEDYRVVIERTVEYSNRPEYFPNGYVRMKKGRGMDKTFSHQLHFWCL 561
Query: 422 NPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPV 481
NP +A E + +I+L+SGTLSP+DSF EL + FP+++E HV+ KQ+W G V
Sbjct: 562 NPAVAFSELANCR--AIVLSSGTLSPIDSFQSELGVPFPIQLEANHVVGKKQVWVGTVGA 619
Query: 482 GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH 541
GP G L ++Y++ ++I + G+L F PSY L+ + W+
Sbjct: 620 GPRGRKLMATYQHTETISH-----------------GVLCFLPSYKLLGKLCQRWQ---- 658
Query: 542 GNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK---DTST----SGAVFFAVC 592
+T +WE+I +HK+ + EP+ + F ++ + +K DT GA+F AVC
Sbjct: 659 --MTRLWEQIEEHKQVIREPQGGDKADFDDILKQFYDAIKCSEDTENGGGRGGALFLAVC 716
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGKVSEGLDFAD+ RAV+ G+P+ D +V LK+ Y + + ++G L+
Sbjct: 717 RGKVSEGLDFADNNARAVITVGIPYPNFKDLQVELKQNYNNQHSGARG---------LLT 767
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
G WY QA RA+NQA+GR IRH + + HPS
Sbjct: 768 GRQWYEIQAYRALNQALGRCIRHN-----VAMTPQASPHPS 803
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
Y I G++V+FP AY Q+ M K++Q L+ + N LLESPTG+GK+L LLC+ LAW+
Sbjct: 11 YTISGVNVQFPCNAYPTQIAMMHKILQGLEREQNCLLESPTGSGKSLALLCSCLAWQ 67
>gi|300176870|emb|CBK25439.2| unnamed protein product [Blastocystis hominis]
Length = 1177
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 235/843 (27%), Positives = 386/843 (45%), Gaps = 161/843 (19%)
Query: 3 TYKIRGIDVEFPFE--AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
TY+ G++VEFP + + Q M +++SL NA++ESPTGTGKTL +LC++L+W
Sbjct: 45 TYRFYGLEVEFPQDRIPFSSQKSTMTAIVKSLSRNENAIVESPTGTGKTLAILCSSLSWI 104
Query: 61 KSLGSF-STLGSQVNNQISGSQSS--------------VNSSQSGDSKLPTILYTSRTHS 105
KS +T S++ +QSS +N+S + + I Y SRTHS
Sbjct: 105 KSTQPIEATQPSEIPPVPEATQSSDYEAIDKLREKLRALNNSLTKQTH--HIYYCSRTHS 162
Query: 106 QLRQVIQELKTSNY------------------------RPKMVILGSREQLCIHREV--- 138
QL Q IQELK SN+ M +L S+ CI++ V
Sbjct: 163 QLDQAIQELKRSNFLMYTHRSEGRIALSLPVLVTEQQRELSMTVLASKSHYCINKAVLEN 222
Query: 139 ---SLLRGSAQNNACRFLCKKGTNR-------RCNHHSRVADYMKNNPHLGDEPIDIEDL 188
S+ FL + T + + R+ K+ + +DIED+
Sbjct: 223 PNFSVDEICGHERELAFLSQGETEKSFDMNFCKFRKQERIFACAKSIHGV----LDIEDM 278
Query: 189 VNIGRTFGPCPY-----------FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSI 237
+ + CPY F+ REL I+FAPYNY+IDP R + + S
Sbjct: 279 KRLCQRKNVCPYVCRIRFRIDVKFVARELMTKSQIIFAPYNYVIDPQIRDSMSINLAKSS 338
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAIL 297
+IFDEAHN+ +A + L + + I S + + ++ L+ N L
Sbjct: 339 IIFDEAHNILTTARSSAGMTIK---LREFQEKTNHFISFMSLLKIEKDNKYLSFTNLVEL 395
Query: 298 ---------RALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIV 348
L +LE E +N + GF + PY DL+I K ID++
Sbjct: 396 WNSTLNSHSDDSLFRLES--GESMMNLLKSGFFQ-NPY------DLDIIS----KNIDLI 442
Query: 349 EV----AAELLQEDKLQNKKST----------TACRIESISNILKIIFRDKGTAHSAYYR 394
+ ++ +D+L +K+ + +++ ++ +F D G + + +R
Sbjct: 443 DAWKKEIDQMTDQDELGDKERNFIRHCLASMGVLGVLRNLARVMTYLFTDAG-KYVSDFR 501
Query: 395 VHVREADANAADVLKGK------------ASRTLSWWCFNPGIAMQEFSRLEVGSIILTS 442
+ + +A + + A+ LS C N I ++ + SI+LTS
Sbjct: 502 LLIEQALPSKSKSKSKFYSKFYSSTNPEPANVELSILCLNAAIVFEDI-KSTCSSIVLTS 560
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
GTL+P+ SFA EL + F ++E I +Q++A +VP + LL S Y+NR + Y
Sbjct: 561 GTLAPLSSFANELNIPFQNQMEGIASIDVHRQLFAAVVPSYHNVSLLGS-YQNRSNPLYM 619
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEP 561
+G+ +++ +++P G++ FFPSY +++Q ++ WK T +R+ + K+ +E
Sbjct: 620 DAVGDVLLDCVQVIPAGVVFFFPSYSVLNQFLSYWKKTK------FIDRLSQIKQVYIEQ 673
Query: 562 RQSSLFPLAIEDYMAKLKD---------------------TSTSGAVFFAVCRGKVSEGL 600
R + F + +Y + + +S +GA+FF VCRGK+SEG+
Sbjct: 674 RDAVGFSAVLTNYTTFMDNFCTFFPPFSRPDKCKERGIQPSSVTGALFFGVCRGKISEGI 733
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DF D+ RAV+ +P+ ++RL REY+D Q Q + G WY++Q
Sbjct: 734 DFKDYMARAVISLSIPYPNSHAHEIRLMREYMDQQHQ--------LNPNVQDGSSWYDEQ 785
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLT 720
A RA+NQ +GR IRH DYGAII + RF +P K ++S W + I+ +++ L
Sbjct: 786 AFRALNQGLGRCIRHSRDYGAIILLESRFGNPEVKKRLSRWFRDEIRVSRSDAELIRGLK 845
Query: 721 RFF 723
FF
Sbjct: 846 AFF 848
>gi|340385001|ref|XP_003390999.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Amphimedon queenslandica]
Length = 466
Score = 292 bits (747), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 181/474 (38%), Positives = 261/474 (55%), Gaps = 41/474 (8%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I + V FPF Y CQ+ YMEKVI++LQN NA+LESPTGTGKTL LLCATL+WR+ L +
Sbjct: 12 IENVPVSFPFTPYPCQIEYMEKVIKALQNNTNAILESPTGTGKTLSLLCATLSWRQQLPA 71
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGD-SKLPTILYTSRTHSQLRQVIQELKTSNYRPKMV 124
S+ + S G P I+Y SRTHSQL Q I ELK+++YRPK+
Sbjct: 72 PVI-----------SEWDLQSDSKGPLGGRPKIIYASRTHSQLSQAIHELKSTSYRPKVS 120
Query: 125 ILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI 183
I+GSR+QLCI+ EV +A+ +AC K + C +++ V D + + P
Sbjct: 121 IIGSRDQLCINSEVMSKESNAEKVHACH---AKVAAKSCTYYNNV-DLKRLSVPESFIP- 175
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIE+LV +G CPY++ RE++ D++F PYNY++D R G+ N+++I DEA
Sbjct: 176 DIEELVGMGTKNKMCPYYLAREMKTEADLIFMPYNYILDLRTRLVHGINITNTVVILDEA 235
Query: 244 HNLEGICADAASFDLSSGLLTACISEA----KNCIDISSTRRGQSSDETLNP-DNFAILR 298
HN+E +C D++SF+L+S + CI + KN + + + +T N + A L+
Sbjct: 236 HNIERVCEDSSSFELTSTDIAHCIKDIDYLLKNKYEEAREYLSELDTQTQNTLKDLANLK 295
Query: 299 ALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQED 358
L L +E + ++ + S+ KPG YI+E L I ET LID A L D
Sbjct: 296 ELFLCIEDSLDKIELKSENNECVKPGSYIFEFLGKAGINTETHVVLIDQCSQAIASLTSD 355
Query: 359 KLQNKKSTTACRIESISNILKIIFR-------DKGTAHSAYYRVHV--------READAN 403
+ ++ ST ++ +KI+F + S +YRV++ R++D
Sbjct: 356 QSLHRTST---YLQKFLEAIKIVFSGSCPVGMTRERMASLHYRVYIKSDNNRKKRKSDVW 412
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
D R L +WCFNPG AM E R V S+ILTSGTLSP++SF EL+L
Sbjct: 413 TTDNNTDDTCRRLCYWCFNPGYAMTELVRQGVRSVILTSGTLSPLESFTSELQL 466
>gi|332025865|gb|EGI66021.1| Fanconi anemia group J protein-like protein [Acromyrmex echinatior]
Length = 653
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 194/655 (29%), Positives = 322/655 (49%), Gaps = 74/655 (11%)
Query: 87 SQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK-MVILGSREQLCIHREVSLLRGSA 145
S++ K+P I Y SRTH QL QV++E K + Y K M IL SR++ CI
Sbjct: 20 SRNKTKKVPKIFYGSRTHGQLEQVVKEFKKTAYSHKRMTILSSRKKTCIQET-----DKN 74
Query: 146 QNNAC-RFLCKKGTNRRCNHHSRVADYMKNNPHL---GDEPIDIEDLVNIGRTFGPCPYF 201
++ C L + ++C +++ D K P + D P DIEDLV++G+ G CPYF
Sbjct: 75 KDKLCNELLDPRLKAKKCKYYN---DDAKKKPTIFSKMDTPWDIEDLVSLGKEVGTCPYF 131
Query: 202 MTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSG 261
R L +I+F PYNY++ P R + + + +I+I DEAHN+E IC +AA+ D+
Sbjct: 132 GARVLMADAEIIFCPYNYILYPEIRDSMQINLRGNIVILDEAHNIENICREAATVDIRDD 191
Query: 262 LLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFT 321
L + E K+ +D+ +A + L L K + ++ + +
Sbjct: 192 KLLIAVKECKHFLDMD-----------YKSITYATIHEYLTDLIKFLNDIEVKDNDRNEM 240
Query: 322 KPGPYIYELLADL-NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI--------- 371
++ + +L N+ + + D + A+++ +D QN K + +I
Sbjct: 241 VSKHWVGAVFRELLNVNEIGCPRFPDFI-AASKIAIDDFKQNMKEENSKKINPTISQESK 299
Query: 372 ---ESISNILKIIFRDKGTAHSAYYRVHVREADANAADVL---------KGKASRTLSWW 419
E + +++I DK YR+ + E + V K RT+
Sbjct: 300 KLLEYLCFGMQMIASDKVDD----YRMCIVETNEFIEKVTENDWFSTTKKLTKVRTMILK 355
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIV 479
C NP I + + EV S+IL SGTL+P S+ EL F + H+I Q++ +
Sbjct: 356 CMNPAIVFEPLAH-EVRSVILASGTLTPTVSYQSELGTKFSYIINPDHIIPKNQLYIRYI 414
Query: 480 PVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNT 539
P G SG L ++Y ++ ++ ELGN I+ + VP G+L FF SY M+ W+N
Sbjct: 415 PQGLSGKPLKATYDQVNTWAFQDELGNLILQVCDAVPFGVLCFFSSYKAMNTIHNRWRNN 474
Query: 540 SHGNLTTIWERICKHKKPVVEPR-QSSLFPL------AIEDYMAKLKDTSTSGAVFFAVC 592
IW+++ K VEP+ + L P+ IE+ +++ T GA+FFAV
Sbjct: 475 G------IWDKLSNLKTIFVEPKYEKDLNPVMKAYRRVIEESLSEQYQT-VRGAIFFAVF 527
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
R KV+EG+DF+D+ R V+ G+P+ + V +K EY +L ++ + LS
Sbjct: 528 RAKVAEGIDFSDNEARCVLAIGIPY-LLQSSDVTMKMEYNNLNKSNESRQ-------LLS 579
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
G +WY A RA+NQA+GR +RH++D+GA++ D+RF + + W++ +++
Sbjct: 580 GSEWYTVNAFRALNQAIGRCVRHKNDWGAVLLVDKRFELQQNINYLPKWVKTNVR 634
>gi|297272722|ref|XP_002808171.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Macaca mulatta]
Length = 1151
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 185/606 (30%), Positives = 316/606 (52%), Gaps = 66/606 (10%)
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIE+LV++G+ CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEA
Sbjct: 239 DIEELVSLGKKLKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEA 298
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLK 303
HN+E ++AS+ ++ L E + ++ + R+ E L ++++ L
Sbjct: 299 HNIEDCARESASYSITEVQLRFARDELDSMVNNNIRRKDH---EPLRAVCYSLINWLEAN 355
Query: 304 LEKRIA-------------EVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEV 350
E + E+ +N ++G T I + + +E I E
Sbjct: 356 SEYLVERDYESACKIWSGNEMLLNLHKMGITTATFPILQGHFSAVLQKEEKISPIYGKEE 415
Query: 351 AAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------A 400
A E+ ++T ++ + +L +FR + + + Y++ +++ +
Sbjct: 416 AREV------PIISASTQIMLKGLFMVLDYLFR-QNSRFADDYKIAIQQTYSWTNQIDIS 468
Query: 401 DANAADVL--------KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFA 452
D N +L + A R L++WC NP +A + + +V +I+LTSGTLSPM SF+
Sbjct: 469 DKNGLLILPKNKKLSRQKTAVRVLNFWCLNPAVAFSDING-KVQTIVLTSGTLSPMKSFS 527
Query: 453 QELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
EL + F +++E HVI + Q+W G + GP G L ++++N ++ E++ E+G ++++
Sbjct: 528 SELGVTFTVQLEANHVIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVC 587
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLA 570
+ V G+L F PSY L+++ W +T +W + K +VEP+ + + F
Sbjct: 588 QTVSQGILCFLPSYKLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKTNFDEL 641
Query: 571 IEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
++ Y +K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR
Sbjct: 642 LQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKR 701
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
Y D ++ +G L G WY QA RA+NQA+GR IRH++D+GA+I D+RF
Sbjct: 702 RYNDHHSKLRG---------LLPGRQWYEIQAYRALNQALGRCIRHQNDWGALILVDDRF 752
Query: 690 -AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLK----LIKTEVSG 743
+PSR S +S W++ IQ +S F + +L F ++ + + ++K + TE +
Sbjct: 753 RNNPSRYISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVLNVSIKDRTNVQDTESTL 812
Query: 744 DVRELK 749
+V LK
Sbjct: 813 EVTSLK 818
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|298706777|emb|CBJ29700.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1061
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 218/708 (30%), Positives = 346/708 (48%), Gaps = 112/708 (15%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKT--------------SNYRP-KMVILGSREQLCIHRE 137
+ P + + SRTHSQL QV+ EL+T + +P M +L SR+ CI+RE
Sbjct: 225 RAPRVYFCSRTHSQLNQVVAELRTCRTAFQDTSAVGIGDDGKPFSMALLASRKSTCINRE 284
Query: 138 V-SLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTF 195
S +G ++AC+ L K+ + C ++ R P P+ D+E+ V +G+
Sbjct: 285 ACSDPKGI--DDACKRLLKE---KACTYYRRAKWAQTKLP-----PVWDVEEAVRMGQEN 334
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ R D+V PYNYL+DP R+ +G+ KN+++IFDEAHNLE +AAS
Sbjct: 335 QACPYYTARASLVNADLVLCPYNYLVDPGVREIMGINLKNAVVIFDEAHNLEDSAREAAS 394
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLK----LEKRIAEV 311
LS L E R + +L+P ++ +LR +++ LE+ + +
Sbjct: 395 AKLSLRALANAAGE---------MHRLGAKSLSLSP-SYDLLRGVIIGVQAFLEEEDSRL 444
Query: 312 PINSKELGFTKPGPYIYELLADLNITQE----TAYKLIDIVEVAAELLQED--------- 358
I S E +Y+ L + Q T+ L+ + E ++ ED
Sbjct: 445 TIGSYEKAHK-----VYKGAEALGLMQSRAGVTSESLVYLKEALKMVINEDGNADPYARD 499
Query: 359 ---------KLQNKKSTTACRIESISNILKII--FRDKGTAHSAYYRVHVREADANAADV 407
+L + ++ + ++++K++ +G + +Y++ V V
Sbjct: 500 QADGASFDHRLGGDEVLSSGSVHVTASLVKVLGFLLTEGMENVDHYKMVVLRERGPWEPV 559
Query: 408 LKGKASRT--------------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ 453
L +WC + E + +V S++LTSGTLSPM+SFA
Sbjct: 560 SSRGRRGRNRPGSGSITAMETYLCFWCQSASTCFSEIDK-QVHSVVLTSGTLSPMNSFAG 618
Query: 454 ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYL-LNSSYRNRDSIEYKQELGNTIVNIA 512
EL + FP R+E HVI K+ + VG G + L++ Y N+ ++Y+ LGN ++ A
Sbjct: 619 ELGIEFPHRLEANHVINVKKQCL-VTSVGYFGKVSLDARYTNQHDLKYQDALGNALLQHA 677
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIE 572
R+VP G+L+FFPSY LMD+ W+ T G L + E + +P + + + E
Sbjct: 678 RVVPGGILVFFPSYGLMDKMHDRWEVT--GLLQALQEIKGVYLEPRGQGKIDGVLAEYYE 735
Query: 573 DYMAKLKDTST----------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
D A ++ S+ +GA+ AV RGKVSEG+DF+D A R VI G+P+ + D
Sbjct: 736 DIAAARENQSSKENQYHSSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKD 795
Query: 623 PKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
+V LK+EY D + + + G WY+ QA RAVNQAVGR IRHR D+GAI
Sbjct: 796 LQVMLKKEYQD--------QRRTRDPRLVGGRAWYSLQAFRAVNQAVGRCIRHRSDFGAI 847
Query: 683 IFCDERFAHPSRKS-QISLWIQPHI-QCYSKFGDVVYTLTR-FFREER 727
+ CD R+A + + +S W++ + QC S +V L FFR+ +
Sbjct: 848 VLCDPRYASSTETTASLSKWVRSSVRQCRSV--EVSLPLVEAFFRQHQ 893
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 6 IRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
IRG V FP + + QL M K++ +Q N LLESPTGTGKTL LLCA LAW++
Sbjct: 9 IRGFPVSFPKGRKPFAPQLALMSKLLVGVQKGENCLLESPTGTGKTLALLCAALAWQR 66
>gi|322792265|gb|EFZ16249.1| hypothetical protein SINV_00648 [Solenopsis invicta]
Length = 599
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 312/639 (48%), Gaps = 92/639 (14%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRPK-MVILGSREQLCIHREVSLLRGSAQNNACR 151
K+P I Y +RTH Q+ QV++ELK + Y+ K M IL SR+ CI + +N+ C
Sbjct: 4 KVPKIYYGTRTHKQIAQVVKELKRTAYKHKRMTILSSRDHTCIQQT-----NRNKNDLCN 58
Query: 152 FLCKKGTNRRC---NHHSRV-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQ 207
L N+ C N HS+ A + P P DIEDLV++G + G CPYF R L
Sbjct: 59 ELLDPHKNKTCPYYNEHSKKKASIFGSMP----TPWDIEDLVSLGNSIGACPYFGARSLM 114
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
DI+F PYNY++DP R+ + + + I+I DEAHN+E IC +AA+ L + I
Sbjct: 115 TKADIIFCPYNYILDPAIRESMQIRLRGDIVILDEAHNIEDICREAANVILRDDEINTAI 174
Query: 268 SEAKNCIDISSTRRGQSSDETLNPDNFAILRAL------LLKLEKRIAEVPINSKELGFT 321
+ C +S+ R + D P+ A+ + +K ++I +V N E
Sbjct: 175 MD---CHHLSAVYRDKYHD----PNTAAVYDTIEKYFEDFVKFIQKI-DVEQNKNEERHN 226
Query: 322 KPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK------KSTTACRIESIS 375
K P IT++T +++ + +A E++ D N ++ A +I+ +
Sbjct: 227 KIKP---------TITRDTK-NILEHLCLAIEMITSDIYANDYRIYVVETIEASKIKPVC 276
Query: 376 NILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEV 435
+ +I+ K T + RTL C NP + +R +
Sbjct: 277 -LSNLIWLSKNTEKTKI---------------------RTLKVICMNPAVTFAPLAR-DT 313
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENP-HVITSKQIWAGIVPVGPSGYLLNSSYRN 494
S+IL SGTL+P SF EL FP R+ NP H+I QI+ +P P+G Y
Sbjct: 314 RSVILASGTLTPTTSFQSELGTKFP-RIVNPNHIIPKDQIYIRCIPRAPNGQSFKVVYEE 372
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
+ ++ LGN ++ + VP G+L FF SY++M+ WK +W+++
Sbjct: 373 VNKWTFQDNLGNLVIQVCDAVPYGVLCFFSSYHVMNTICNRWKENK------MWDKLSTL 426
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTS------GAVFFAVCRGKVSEGLDFADHAGR 608
K +EP+ +E+Y + ++ +ST GA+ FAV RGK++EG+DF+D+ R
Sbjct: 427 KTIFMEPKDHRENHQVMEEYRSVIEKSSTQSFRDSCGALLFAVFRGKMAEGIDFSDNEAR 486
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
V+ G+P+ ++ + +K Y D S+G LSG +WY A RA+NQA
Sbjct: 487 CVLAIGIPYFRQSN-DITMKMNYNDANI-SKG---------LLSGREWYTVNAFRALNQA 535
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+GR +RH +D+GA++ DER + WI+ +++
Sbjct: 536 IGRCVRHINDWGAVLLIDERHMQSKNNDYLPKWIKQNMK 574
>gi|390361889|ref|XP_003730027.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Strongylocentrotus purpuratus]
Length = 466
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 237/448 (52%), Gaps = 53/448 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP+ G+ VEFPFE Y CQ YM KVIQ LQ N +LESPTGTGKTLCLLC+TLAWR
Sbjct: 1 MPSVMCEGVQVEFPFEPYPCQKDYMRKVIQCLQMSKNGVLESPTGTGKTLCLLCSTLAWR 60
Query: 61 KSLGSFSTLG-------------------------SQVNNQISGSQSSVNSSQSG-DSKL 94
+ + LG Q+ + + S+ G
Sbjct: 61 HTYIAQQELGKCLKGSNGGGDGAGAGAGAGAGAYKEQLMTDLKAASGWGEGSEEGLFIDR 120
Query: 95 PTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLC 154
P I+Y SRTHSQL Q + +LK + YRPK+ +LGSREQ+C+H EV + N+A +C
Sbjct: 121 PKIIYASRTHSQLSQALDQLKDTIYRPKVCVLGSREQMCVHPEVVKVES---NSAKVHMC 177
Query: 155 KKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVF 214
+ N + H D K + +DIEDLV +G CPY+M REL+ + DI+F
Sbjct: 178 RAKVNAKMCHFHNNLDNKKGEKAFSEGILDIEDLVKLGNAHKVCPYYMARELKTSADIIF 237
Query: 215 APYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA---- 270
PYNYL+DP R+ G+E + +I+IFDEAHN+E +C ++ASFDL+S L +C+ E
Sbjct: 238 MPYNYLLDPKSRRIHGIELQGNIIIFDEAHNVERMCEESASFDLTSFDLASCVEETDHLL 297
Query: 271 KNCIDISSTR-----RGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGP 325
K ++++ G D+ + A L+ L L LE+ I+ I + G TKPG
Sbjct: 298 KKTVEVTMLNERYHGEGMGGDDEFDAAGLATLKKLFLDLEEHISSFNIPNHSDGITKPGS 357
Query: 326 YIYELLADLNITQETAYKLIDIVE-VAAELLQEDKLQNKKSTTACRIESISNILKIIFRD 384
+I+E + +NI ET +L+ ++E + + L + + K A ++ +I+ I+F
Sbjct: 358 FIFEFFSQVNINAETKNELMQLLEKMISHLTNSSTVFHNK---AAGLQKFHDIITIVFSR 414
Query: 385 KGTAHSA-----------YYRVHVREAD 401
G S+ YY+VH+R +
Sbjct: 415 DGPEGSSRTQLTASQMTKYYKVHIRTTE 442
>gi|402467806|gb|EJW03051.1| DNA repair helicase (rad3) [Edhazardia aedis USNM 41457]
Length = 704
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 203/756 (26%), Positives = 351/756 (46%), Gaps = 110/756 (14%)
Query: 11 VEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLG 70
++ PF+ Y+ Q + +++ S+ ++L+ESPTGTGKT +LC+ L++ + SF
Sbjct: 9 LKMPFKPYEAQRITTSQILDSICTSTSSLIESPTGTGKTYSILCSVLSYLSNTKSFK--- 65
Query: 71 SQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSRE 130
S+ + +S ++ + K P I +RTH Q+ Q++ L+ + P++ +L SR
Sbjct: 66 --------DSRDTKDSKENNNRK-PKIFICTRTHKQISQMLDSLRKLSDVPQIAVLSSRT 116
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVN 190
QLCI++ V + S +N+AC L KK C + +N L + +DIE+L
Sbjct: 117 QLCINQIVKI--ASDRNDACLKLIKKKNG--CKYFENTDSLAQN---LSSKIMDIEELAK 169
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI----------- 239
G+T CPYF R+LQ T DI+FAPYNYL+DP R L +E KN+++I
Sbjct: 170 AGKTMAGCPYFAMRKLQATADIIFAPYNYLVDPSIRASLNIELKNAVVIVDEAHNIEDFC 229
Query: 240 -----FDEAHNLEGICADAASFDLSSGLLTACI---------------------SEAKNC 273
F L I D L +G++ I AK+
Sbjct: 230 RSAGSFQATSELFVIIIDEIKKKLVNGMIAPEIVAHLQTIRGFLLIFTQFPSKNGSAKHD 289
Query: 274 IDISSTRRGQSSDETLNPDNFAILRALL-----LKLEKRIAEVPINSKELGFTKPGPYIY 328
+ + S + N NF + K + +++K K G I
Sbjct: 290 MKGKIGKFDNYSHQFSNKHNFLSSDKKFSVQSQMNKSKTFPQSKVSAKNNENVKTGREII 349
Query: 329 ELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTA 388
E L +NI +E ++ +++ + L ++ ++ S + ++ +S+++ ++
Sbjct: 350 EFLESMNIKKE----MVLLLKQSLNALSDENYRDLISPSYIKL--MSSLVYVL------- 396
Query: 389 HSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPM 448
+ H + A + + +S ++++W +P + + F+ S+IL SGTL P
Sbjct: 397 --EHILFHSPDCYAFQLKISETSSSFSINFWLLDPAVIFKPFA-CAAKSVILLSGTLKPF 453
Query: 449 DSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTI 508
+S EL +F VE PHVI I I+ G G L Y + +S EY ++ + +
Sbjct: 454 ESLRSELGFSFKNAVEAPHVIKDTNICVSIIKKGHLGKELIGKYGDSESFEYLDQIKHIL 513
Query: 509 VNIARIV--PDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL 566
+ I + + G+L+F PSY ++ N+ I+ E + ++
Sbjct: 514 LMIKKNLGKAGGILVFVPSYTFLENF-----QKRSTNIENIY----------FESKSAAE 558
Query: 567 FPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
F + + KD TS + V RG+ +EG+DF D+ R VV G+P+ DP+V
Sbjct: 559 FGKILRKFK---KDADTSVPICMCVYRGRAAEGMDFKDNHARVVVALGIPYPAYKDPEVV 615
Query: 627 LKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCD 686
KR Y D + KE K G+ WY QA RAVNQA+GRV+RH++D+GA++F D
Sbjct: 616 SKRMYND--------KNKEIK-----GQMWYEFQAFRAVNQAIGRVVRHKNDWGAVVFLD 662
Query: 687 ERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRF 722
R+ ++ + W++ +++ Y + + F
Sbjct: 663 SRYCWHKNQTHLPKWVKTNLKTYESVSSFINVFSAF 698
>gi|123505191|ref|XP_001328927.1| helicase [Trichomonas vaginalis G3]
gi|121911876|gb|EAY16704.1| helicase, putative [Trichomonas vaginalis G3]
Length = 884
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 220/799 (27%), Positives = 363/799 (45%), Gaps = 127/799 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+K+ GI+V FP E Y Q+ M VI+S++ NA+LESPTGTGK++ LL A LA++KS
Sbjct: 10 FKVAGIEVPFPHEKPYAAQMALMAGVIKSMRTGQNAILESPTGTGKSIALLSAALAFQKS 69
Query: 63 --------------------LGSF-------------STLGSQVNNQISGSQSSVNSSQS 89
LG F S L +Q N + S
Sbjct: 70 QKEVNITPPGQIDPPITKSYLGFFPPMKLVHTDQEIFSPLLTQGLNPSEIPRYSEFEGTE 129
Query: 90 GDSKLPT------------ILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHRE 137
G + T I Y +RTH QL+Q+++E+K + P+MVI+ SR Q+C++ +
Sbjct: 130 GPTDYTTDFYVKRKQHAGQIWYATRTHQQLKQLVKEMKKLPFHPQMVIMASRAQVCVNPK 189
Query: 138 VSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGP 197
+ + S + C L K G C + + + P+ + +IEDL + R
Sbjct: 190 I--MNQSDVDGHCSDLQKNGG---CPYDKKKGIPKEFKPNGILDKFEIEDLKDWCRKNKG 244
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
CPYF++R++ DIVF PYNY +DP + + ++ LI DEAHN+E C D SF
Sbjct: 245 CPYFISRKMMMAADIVFCPYNYFLDPKIKGQMQLDLTGVYLIIDEAHNIENSCRDGGSFH 304
Query: 258 LSSGLLTACISEAKNCI---DISSTRRGQSSDETLNPDNFAILRALLLK----LEKRIAE 310
S L + + I DI S R+ F I+ L+ K
Sbjct: 305 QSRKDLEWALMYLRKSIKKSDIPSLRKA-----------FMIVLELITKEYEWFTSTTKY 353
Query: 311 VPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR 370
+ + ++ + Y+ L LN++ T KL+ + +
Sbjct: 354 LRLQGQKEFIVRDNKAFYDSLR-LNLSFYT--KLVAAFDCIFKFCNTMNFPQIYQEA--- 407
Query: 371 IESISNILKIIFRDKGTAHSAYYRVHVRE-------ADANAADVLKGKASRTLSWWCFNP 423
+ I IL I + A + + +R D + D+ G C NP
Sbjct: 408 -DKIPMILGGILEQQWVAIALTLKYDLRNYAFAIVLGDDESNDIFHG--------LCMNP 458
Query: 424 GIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGP 483
G E ++IL+SGTL+P++ F E + FP+R+ PHVI+ Q+ G
Sbjct: 459 GAVFHR-PGTEASNVILSSGTLTPLEEFENEFGVPFPIRLSAPHVISPDQV-VGFTITSC 516
Query: 484 SGYLLNSSYRNRDSIEYKQE----LGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNT 539
L+S ++ +S + + L +++I ++P+G+L F S+ + + + W+
Sbjct: 517 DNVTLSSRHQYLESQGMRNDVNLKLAEILLHILPVIPNGVLFFVTSHSFLMRMLDAWQKA 576
Query: 540 SHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEG 599
++E+I K KK E P + ++ K K + G++ V RG+ SEG
Sbjct: 577 G------LYEKIDKIKKIFYET------PDSDPEFFDKYKASCEEGSLLIGVFRGRSSEG 624
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQ 659
+DF D RAV++ G+PF + D V+LK+EY D + Q +G WY+
Sbjct: 625 IDFVDEQARAVIVFGIPFPSYYDIDVKLKKEYNDYKNQ--------------TGNVWYDT 670
Query: 660 QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTL 719
QA R++ QA+GR IRH++D+G++I D+R+ P+ + W++ I+ +V L
Sbjct: 671 QAYRSLFQALGRCIRHKNDFGSVILIDQRY--PNELHRFPKWLKTQIRNDVGLNQIVTEL 728
Query: 720 TRFFR--EERICGSTNLKL 736
+RF++ +E+ +LK+
Sbjct: 729 SRFYQRMKEKFPRKISLKM 747
>gi|351703518|gb|EHB06437.1| Fanconi anemia group J protein [Heterocephalus glaber]
Length = 836
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/583 (31%), Positives = 301/583 (51%), Gaps = 68/583 (11%)
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIE+LV++GR CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEA
Sbjct: 6 DIEELVSLGRKLKACPYYTARELTEDADIIFCPYNYLLDAQIRESMDINLKEQVVILDEA 65
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLK 303
HN+E ++AS+ ++ L E + ++ S+ R+ E L +++ L
Sbjct: 66 HNIEDCARESASYSVTEVQLRFARDELDSLVN-SNIRK--KDHEPLRAVCCSLINWLEAN 122
Query: 304 LEKRIA-------------EVPINSKELGFTKPG-PYIYELLADLNITQETAYKLI---D 346
E + E+ +N ++G T P + L+ + +E + +
Sbjct: 123 TEHLVERDYESSCKIWSGNEMLLNLYKMGITTATFPILQGHLSSVLQKEEKVSPIFGKEE 182
Query: 347 IVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY---------YRVHV 397
+EV ++T ++ + +L+ +FR Y + H
Sbjct: 183 TIEVPI----------ISASTQIMLKGLFMVLEYLFRQNSRFADDYKVAIQQTYSWTHHT 232
Query: 398 READANA--ADVLKGKASR------TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMD 449
+D N A K+SR L++WC NP +A + + +V +I+LTSGTLSPM
Sbjct: 233 DISDKNGFFAVPKNKKSSRQKNAVHVLNFWCLNPAVAFSDING-KVRTIVLTSGTLSPMK 291
Query: 450 SFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIV 509
SF+ EL + F +++E HVI + Q+W G + GP G L +++++ ++ E++ E+G ++
Sbjct: 292 SFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLL 351
Query: 510 NIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLF 567
++ + V G+L F PSY L+++ W T +W + K +VEP+ + + F
Sbjct: 352 SVCQTVSQGILCFLPSYKLLEKLKERWL------YTGLWHNLELVKTVIVEPQGGEKTDF 405
Query: 568 PLAIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
++ Y +K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V
Sbjct: 406 DELLQVYYDAVKYRGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVE 465
Query: 627 LKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCD 686
LKR+Y D ++ +G L G WY QA RA+NQA+GR IRH++D+GA+I D
Sbjct: 466 LKRQYNDHHSKLRG---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVD 516
Query: 687 ERF-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+RF +PSR S +S WI+ IQ + F + +L F ++++
Sbjct: 517 DRFRNNPSRYISGLSKWIRQQIQHHLTFESALESLAEFSKKQQ 559
>gi|8886947|gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]
Length = 1119
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 220/720 (30%), Positives = 331/720 (45%), Gaps = 132/720 (18%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATLA 58
Y+I G+ VEFP++ Y QL +M +VI +L +ALLESPTGTGK+L LLC+ LA
Sbjct: 27 YQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLA 86
Query: 59 WRKSLGSFSTLGSQVNNQISGSQSSVNSS-QSGDSKLPTILYTSRTHSQLRQVIQELKTS 117
W+KS S G+ +++ S + +S+ + + ++PTI Y SRTH+Q+ QVI+E + +
Sbjct: 87 WQKSYKSRFPNGNLSHSKTQPSDIAGSSNVEPHEPQIPTIYYASRTHAQITQVIREYRKT 146
Query: 118 NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADY--MKNN 175
YR M +LGSR++ C + V K+ + +C R+ Y ++
Sbjct: 147 GYRVPMTVLGSRKRYCTNSHVQ--------------GKENVDEKCGV-GRILAYPSLQQT 191
Query: 176 PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKN 235
H G DIEDLV IG+T +T L K+
Sbjct: 192 GHNGVH--DIEDLVKIGKT-------VTGRLLKS-------------------------- 216
Query: 236 SILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFA 295
F N+E I +A S +L + I + KN ++ S + D +
Sbjct: 217 ----FTVHSNMEDIAREAGSINLEEDI----IFKLKNELEQMSEVEPEIYDSL-----YE 263
Query: 296 ILRALLLKLEKRIAEVPINSKELGFTK-PGPYIYELLADLNITQETAYKLIDIVEVAAEL 354
++ L+ + ++ + + F+ G + L + NIT+E L A
Sbjct: 264 VVEGLISWIGRKKDSLAKRDVDHYFSNWTGDRALKELKEFNITRENFPNLKACFNQAITK 323
Query: 355 LQEDKLQNKK----STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKG 410
+ ++ K + +E + L F G +H Y + ++ + A D
Sbjct: 324 SEAAEIDPDKPYLSGISVSTLEELFATLTYFFSRNG-SHVLDYEMGLQRS-AKRGD---N 378
Query: 411 KASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
+ T S WC NP + ++ + L + SIILTSGTLSPM+SF+ EL + F +E PHVI
Sbjct: 379 GWTNTFSLWCMNPSVVFKDLADLSL-SIILTSGTLSPMNSFSSELGMQFGTCLEAPHVID 437
Query: 471 -SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ Q+WAG + P Y LN+SYR ++ ++ LG ++ I IVP G L+FFPSY LM
Sbjct: 438 PNMQVWAGAISTVPGNYPLNASYRTAEAYAFQDALGKSLEEICTIVPGGSLVFFPSYKLM 497
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDY------------- 574
++ W T W R+C +EPR S F +++Y
Sbjct: 498 EKLCTRWHETGQ------WSRLCLKTDLFIEPRGGSKDDFETVLKEYYDSISGKNRLIGR 551
Query: 575 ----------MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+ + +D S G+ F AVCRGK +H +T F
Sbjct: 552 NSSVKKAGSVITEAQDDSKRGSAFLAVCRGKGP-----YEHQS----MTWFVFKFYMFLS 602
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
V LKR+Y D S+ + L G +WY QQA RA+NQA GR IRHR DYGAIIF
Sbjct: 603 VELKRKYNDTNKSSK---------NLLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAIIF 653
>gi|412990074|emb|CCO20716.1| predicted protein [Bathycoccus prasinos]
Length = 1018
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 315/654 (48%), Gaps = 55/654 (8%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFL 153
+P I SRTHSQ+ Q+ +ELK YRP +LGSR+Q C ++ + +
Sbjct: 388 IPRIFLCSRTHSQIAQLARELKRCPYRPNFSVLGSRQQFCPAKKTDEECQEMTRGCVKAV 447
Query: 154 CKKGTNRRCNHHSRVA---DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
T+ +C + +R A D M+N H+ DIEDL C +++T+EL K
Sbjct: 448 PPHSTSSKCAYFNRQAHLLDEMRN-AHI----WDIEDLKYAAEEHEACTFYVTKELYKDA 502
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
+ V PYNY+ D R + ++ N+ +I DE HN+E +C + AS ++ L ++E
Sbjct: 503 EFVLCPYNYIFDEGIRAAMDIDLTNAAIIIDEGHNIEDVCREGASVEVYEKDLERYLNE- 561
Query: 271 KNCIDISSTRRGQSSDETLNPDNFAI-LRALLLKLEKRIAEVPINSKELGFTKPGPYIYE 329
I I + E L NF I + A + + K+ E + + P I E
Sbjct: 562 ---IGILVV----TFPEALPVKNFLIQIAAWISRKMKQRQEFDRYKQTRTISDPNVIIEE 614
Query: 330 L---LADLNITQETAYKLIDIVEV----AAELLQEDKLQNKKSTTACRIESISNILKI-- 380
L L + +ET ++ V+ ++ +Q Q +K T ++++ +I
Sbjct: 615 LWDALCNPKREEETLDSVLKKVQTITAKQSKTMQMISEQGEKVTGVLGMQAMRFANEIAT 674
Query: 381 ---IFRDKGTAHSAYYRVHVREADANAADVLK-GKASRTLSWWCFNPGIAMQEFSRLEVG 436
+F+ + +A +N AD K + + + WC P +A + + +
Sbjct: 675 KFSLFKKYSNDYVLCIAQFAHDAFSNPADKPKHDEKTGGFALWCLRPAVAFERVAE-KAR 733
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
+ILTSGTLSP S EL + FP++V+ PHV+ + QI+ V L + RN
Sbjct: 734 CVILTSGTLSPTSSLEGELGVPFPIKVDAPHVVPNNQIF-----VESLDTLGAITRRNLQ 788
Query: 497 SI--EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
S ++ LG+ ++ + +P G+L+F PSY L+ + W +T T +I KH
Sbjct: 789 SSGQDFSARLGDMLLRYCKHIPGGVLVFLPSYELIQRISDEWFHT-----TGHHAQISKH 843
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
KK V E S F +ED+ LK G++ FAV RGK SEGLDF D+A RAV G
Sbjct: 844 KKIVFETGGSRGFDETLEDFRDGLK---KKGSLLFAVFRGKCSEGLDFKDNAARAVFCIG 900
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+PF + D KV LK+++ + + G + + L G WY QA RA NQA+GR +R
Sbjct: 901 IPFPNLGDVKVNLKKQF---NSSAHGAQK-----NLLDGNRWYEHQAFRAYNQALGRCVR 952
Query: 675 HRHDYGAIIFCDERFAHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
H HDY AI D+RF H + IS W++ ++ + V TL FF+ R
Sbjct: 953 HLHDYAAIFLVDQRFCHNRENINLISKWVRGRVRTSGGANESVGTLNEFFQTLR 1006
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 3 TYKIRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
T+ + GI V FP Q + M KV+Q+L+ K +AL+ESPTGTGK+L LLCA+LA++
Sbjct: 159 TFPMMGIPVAFPKGLTPLIPQKIVMSKVLQALKTKQHALVESPTGTGKSLALLCASLAFQ 218
Query: 61 KSL 63
K +
Sbjct: 219 KEM 221
>gi|195420017|ref|XP_002060746.1| GK24077 [Drosophila willistoni]
gi|194156831|gb|EDW71732.1| GK24077 [Drosophila willistoni]
Length = 297
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 191/302 (63%), Gaps = 21/302 (6%)
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
M++ +V S+ILTSGTL+P+ EL + +ENPH++ Q++ I+ GP
Sbjct: 1 MEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQ 60
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
SS++NRD+ +Y LG TI+N++RIVPDGLL+FFPSY ++++C+ W+ +
Sbjct: 61 QFISSFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQTSG------ 114
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+W I K +EPR F +E++ ++D + GA F AVCRGKVSEGLDFAD
Sbjct: 115 LWADIAAKKPIFLEPRGKDQFTTTMEEFYQAIRD--SKGACFMAVCRGKVSEGLDFADRN 172
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GRAV+I G+P+ + DPKV LKR YL+ KE +L L+G++WYN A+RAVN
Sbjct: 173 GRAVIIAGLPYPPLKDPKVILKRRYLE------ANRTKENQL--LTGQEWYNLDATRAVN 224
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI----QCYSKFGDVVYTLTRF 722
A+GRVIRHRHDYGAI+ CD RF S+ Q+S WI+ H+ QC S FG +V L +F
Sbjct: 225 HAIGRVIRHRHDYGAILLCDSRFQDNSQVQQLSKWIRGHLGARPQC-SPFGPIVRELRQF 283
Query: 723 FR 724
FR
Sbjct: 284 FR 285
>gi|148683833|gb|EDL15780.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_b [Mus
musculus]
Length = 1180
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 212/704 (30%), Positives = 337/704 (47%), Gaps = 91/704 (12%)
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSRE 130
Q NNQ + +V G K P I + +RTH Q+ Q+ +EL+ + Y M IL SR+
Sbjct: 232 QGNNQEPAN--TVKKDHGGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRD 289
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP--HLG--DEPIDIE 186
C+H EV + + C L + C + V HL DIE
Sbjct: 290 HSCVHPEV--VGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIE 347
Query: 187 DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+LV++GR CPY+ REL + DIVF PYNYL+D R+ + ++ K ++I DEAHN+
Sbjct: 348 ELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNI 407
Query: 247 EGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK 306
E ++AS+ ++ L E + I+ G ++ P LR + L
Sbjct: 408 EDCARESASYSVTEVQLRFARDELDSLIN------GNIRKKSHEP-----LRDVCYNL-- 454
Query: 307 RIAEVPINSKEL---GFTK-----PGPYIYELLADLNITQETAYKLIDIVEVAAELLQED 358
I + NSK L G+ G + L + IT TA + ++A L +E+
Sbjct: 455 -INWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT--TATFPVLQRHLSAVLQKEE 511
Query: 359 KLQN-KKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
K+ A +I IS +++ + +R + R AD K +T S
Sbjct: 512 KVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSR-----FADDYKVAIQQTYS 566
Query: 418 WW----CFNPGIAM-----QEFSRLEVGSIILTSGTLSPMDSFAQ--------------- 453
W F+ + ++ SR ++G L L+P +F+
Sbjct: 567 WTNQIAIFDKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAVAFSDINDKVRTIVLTSGTL 626
Query: 454 --------ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELG 505
EL + F +++E HVI++ Q+W G V GP G L +++++ ++ E++ E+G
Sbjct: 627 SPLKSFSSELGVTFSIQLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVG 686
Query: 506 NTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--Q 563
++++ + V G+L F PSY L+++ W T +W + K + EP+ +
Sbjct: 687 MLLLSVCQTVSQGILCFLPSYKLLEKLRERWI------FTGLWHSLESVKTVIAEPQGGE 740
Query: 564 SSLFPLAIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
+ F ++ Y +K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D
Sbjct: 741 KTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKD 800
Query: 623 PKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
+V LKR+Y D ++S+G L G WY QA RA+NQA+GR IRH++D+GA+
Sbjct: 801 LQVELKRQYNDHHSKSRG---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGAL 851
Query: 683 IFCDERF-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
I D+RF +P+R S +S W++ IQ +S F + +LT F R
Sbjct: 852 ILVDDRFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEFSR 895
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+ Y I G+ + FP AY QL M +++ L + + LLESPTG+GK+L LLC+ LAW+
Sbjct: 11 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQ 70
Query: 61 KSL 63
+SL
Sbjct: 71 QSL 73
>gi|325191332|emb|CCA26115.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 957
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 219/768 (28%), Positives = 354/768 (46%), Gaps = 111/768 (14%)
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT--S 117
R+ SF++ ++I GS + + S + P I + SRTHSQL Q ++E + S
Sbjct: 187 RRLPASFTSASEPDPDRI-GSNVTFSPSTIAAVRPPKIFFCSRTHSQLAQAVEEFRKCPS 245
Query: 118 NY--------------RPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTN---- 159
+Y R + IL S+ CI+ R + R + +K N
Sbjct: 246 SYFHFLGDYPELEFRSRLRSCILASKSHFCINS-----RAKQNKHDNRSVDEKCQNLLSE 300
Query: 160 RRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
+C+ + + +P + DIE+ +++ + C Y+ DIVF PY+Y
Sbjct: 301 NKCSFYRLGRESNAQSPKIP-HVWDIEEFISLSKRKKECAYYSALNTLPFADIVFCPYSY 359
Query: 220 LIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
LI P R + + K++I++ DEAHN+E IC +ASF+++ L+ CI I+ ++
Sbjct: 360 LIHPSIRSAVKISVKDAIVVLDEAHNVEDICRSSASFEVTKDTLSICIQSFTQVIEKAN- 418
Query: 280 RRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSK--ELGFTKPGPY--------IYE 329
P + L +L E+ + V K GF + +++
Sbjct: 419 ----------RPQAYPSLLKILTGFERWMDMVSTTVKLQTTGFEEESNVWSGSDAIAMFD 468
Query: 330 LLADLNITQETAYKLID--IVEVAAELLQEDK----------LQNKKSTTACR------I 371
A +N ++ ++ + E L+QE+K +Q R +
Sbjct: 469 EYAGMNQDNFSSLQVASNLVHEHERILMQEEKGTGNDEKSGSIQPNSPEVLLRPIALKTV 528
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADVLKGKASRTLSW--- 418
E+I + +FRD + + + +D + A K + T W
Sbjct: 529 ETILCVASFMFRDNFKYLDDFKLLFFKSRAQKWSKDIPSDDHLAMKDKKATTNTAGWQFR 588
Query: 419 ---WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK-QI 474
WC + + + ++ + S+ILTSGTL+PMDS+A EL L+F +R+E HV+ + Q+
Sbjct: 589 LAIWCLSGAVVFADIAK-DARSVILTSGTLTPMDSYAGELGLDFGVRLEANHVVDMRTQV 647
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+ + GP L+++Y+N+++ Y+ LGN + ++P G+L+F PSY L+ +
Sbjct: 648 FIRAIMQGPGQVDLSTTYQNQNTFRYQDALGNLLKQYVELIPGGILMFLPSYRLLGILVN 707
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSL-FPLAIEDY-MAKLKDTSTS-------- 584
WK T +W +I KK E R + + F +E Y +A K+ S+S
Sbjct: 708 RWKQTG------VWYQINTAKKVFTEARSAGINFDADLEQYKLAVQKEDSSSDAQSPKQR 761
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
GA+F AV RGKVSEG+DF+D RAV+ G+PF + +V LKREY D + +
Sbjct: 762 GAIFLAVYRGKVSEGIDFSDGNARAVIAVGIPFPNLKQLQVSLKREYQDRKCKI------ 815
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQP 704
E KL L+G WY QA RA+NQAVGR IRHR+DYGAI D R + S W++
Sbjct: 816 ERKL--LNGHQWYQLQAFRALNQAVGRCIRHRNDYGAIFLVDSRHRMQAYAPNFSKWMRS 873
Query: 705 HIQCYSKFGDVVYTLTRFFREE---RICGSTNLKLIKTEVSGDVRELK 749
I D + L++FF+ R C + I E G V +K
Sbjct: 874 LIVEQEHTDDCLPELSQFFQYNARVRPCVPVSTIKIAYEPDGIVEPMK 921
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
YK+ + PF A QL M +V+ +L+ +ALLESPTG+GKTL +LC+ L+++K
Sbjct: 25 YKVAFATDKKPFPA---QLAVMNRVLLALKTNQHALLESPTGSGKTLAILCSCLSFQK 79
>gi|30795235|ref|NP_840094.1| Fanconi anemia group J protein homolog [Mus musculus]
gi|78099253|sp|Q5SXJ3.1|FANCJ_MOUSE RecName: Full=Fanconi anemia group J protein homolog; Short=Protein
FACJ; AltName: Full=ATP-dependent RNA helicase BRIP1;
AltName: Full=BRCA1-associated C-terminal helicase 1;
AltName: Full=BRCA1-interacting protein C-terminal
helicase 1; Short=BRCA1-interacting protein 1
gi|62740250|gb|AAH94252.1| BRCA1 interacting protein C-terminal helicase 1 [Mus musculus]
Length = 1174
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 212/704 (30%), Positives = 337/704 (47%), Gaps = 91/704 (12%)
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSRE 130
Q NNQ + +V G K P I + +RTH Q+ Q+ +EL+ + Y M IL SR+
Sbjct: 226 QGNNQEPAN--TVKKDHGGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRD 283
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP--HLG--DEPIDIE 186
C+H EV + + C L + C + V HL DIE
Sbjct: 284 HSCVHPEV--VGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIE 341
Query: 187 DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+LV++GR CPY+ REL + DIVF PYNYL+D R+ + ++ K ++I DEAHN+
Sbjct: 342 ELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNI 401
Query: 247 EGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK 306
E ++AS+ ++ L E + I+ G ++ P LR + L
Sbjct: 402 EDCARESASYSVTEVQLRFARDELDSLIN------GNIRKKSHEP-----LRDVCYNL-- 448
Query: 307 RIAEVPINSKEL---GFTK-----PGPYIYELLADLNITQETAYKLIDIVEVAAELLQED 358
I + NSK L G+ G + L + IT TA + ++A L +E+
Sbjct: 449 -INWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT--TATFPVLQRHLSAVLQKEE 505
Query: 359 KLQN-KKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
K+ A +I IS +++ + +R + R AD K +T S
Sbjct: 506 KVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSR-----FADDYKVAIQQTYS 560
Query: 418 WW----CFNPGIAM-----QEFSRLEVGSIILTSGTLSPMDSFAQ--------------- 453
W F+ + ++ SR ++G L L+P +F+
Sbjct: 561 WTNQIAIFDKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAVAFSDINDKVRTIVLTSGTL 620
Query: 454 --------ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELG 505
EL + F +++E HVI++ Q+W G V GP G L +++++ ++ E++ E+G
Sbjct: 621 SPLKSFSSELGVTFSIQLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVG 680
Query: 506 NTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--Q 563
++++ + V G+L F PSY L+++ W T +W + K + EP+ +
Sbjct: 681 MLLLSVCQTVSQGILCFLPSYKLLEKLRERWI------FTGLWHSLESVKTVIAEPQGGE 734
Query: 564 SSLFPLAIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
+ F ++ Y +K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D
Sbjct: 735 KTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKD 794
Query: 623 PKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
+V LKR+Y D ++S+G L G WY QA RA+NQA+GR IRH++D+GA+
Sbjct: 795 LQVELKRQYNDHHSKSRG---------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGAL 845
Query: 683 IFCDERF-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
I D+RF +P+R S +S W++ IQ +S F + +LT F R
Sbjct: 846 ILVDDRFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEFSR 889
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+ Y I G+ + FP AY QL M +++ L + + LLESPTG+GK+L LLC+ LAW+
Sbjct: 5 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQ 64
Query: 61 KSL 63
+SL
Sbjct: 65 QSL 67
>gi|339240165|ref|XP_003376008.1| fanconi anemia group J protein-like protein [Trichinella spiralis]
gi|316975301|gb|EFV58747.1| fanconi anemia group J protein-like protein [Trichinella spiralis]
Length = 822
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 320/641 (49%), Gaps = 98/641 (15%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFL 153
P I Y +RTH QL Q+++ELK ++Y+ KM I+ SRE C++ V + ++ AC+ L
Sbjct: 160 PKIFYAARTHKQLAQMVRELKKTHYQNVKMTIMASREFTCLNPNVC--QEVDKSAACQKL 217
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHL------------------GDEPIDIEDLVNIGRTF 195
N C + Y +N L DIED++ +G
Sbjct: 218 LLDHKNGGCIFMRNLKKYDRNISGLRKLLYYSIKRKSLEETTDSGFAWDIEDIMQLGECH 277
Query: 196 GPCPYFMTRE-LQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPYF + L + ++F PYNYLIDP R L + K I+IFDEAHN+E IC +A+
Sbjct: 278 TICPYFACIDILARDAQLIFCPYNYLIDPMIRDTLQISLKGQIIIFDEAHNMEDICREAS 337
Query: 255 SF-------DLSSGLLTAC--------------ISEAKNCIDISSTRRGQSSDETLNPDN 293
SF D++ +LT +S AKN +D +G + D
Sbjct: 338 SFEIKKMELDMAINILTLLAEKSDFINEVAKPFVSYAKNIVDWIEREKGLYTKIWTGADM 397
Query: 294 FAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAE 353
+ L+++ L+ E I E+ L L D N +Q T
Sbjct: 398 YVQLQSMGLQRES-IDELKTVLSCL-----------LEVDSNSSQGTG---------KHR 436
Query: 354 LLQEDKLQNKKSTTACRIESISNILKIIFRD-----KGTAHSAYYRVHVREADANAADVL 408
++ +DKL N +E + L ++RD + YR+ +R+ ++L
Sbjct: 437 VINDDKLLNCIKP----MEKLLYALDYLYRDFDNYGEKNFGCYSYRMCLRK---ERLELL 489
Query: 409 KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHV 468
K S+ L A + S + S+IL SGTLSP+ S+A EL L F +E PHV
Sbjct: 490 KSD-SKNLR--------AFDDVSS-KTKSVILASGTLSPLKSYATELGLPFQFSLEAPHV 539
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ +++W G + VGP+ L ++++ +S ++ EL + + ++ +VP G+L F PSY L
Sbjct: 540 VPPERMWIGSIGVGPNDIPLKATFQQAESFAFQDELASLLTDVCNVVPGGILCFIPSYRL 599
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK-----DTST 583
+++ + WK + +W+R+ K+ +VEP+ S A+ + ++ ++
Sbjct: 600 LNKLVNRWK-----QVPGLWDRLNDSKQVIVEPKGSEHLESALTSFYYAIEHSTEINSKC 654
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ AV RGK+SEG+DF+D++ RAV+ G+PF + + +V+LK++Y + + ++ G
Sbjct: 655 TGALLLAVYRGKISEGIDFSDNSARAVIAVGIPFPNLKNIQVQLKKQYNNTRLKNAVG-- 712
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
+ S +SG++W QA RA+NQA+GR +RH+ D+GA++
Sbjct: 713 LGVQHSLISGDEWLEIQAYRALNQALGRCLRHKMDWGALLL 753
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
+ G D+ FPF Y Q M++ +++L++ N L+ESPTGTGK+L LLC+ LAW+K
Sbjct: 18 VGGADISFPFSPYPSQRAIMDRTLRALKHSNNCLIESPTGTGKSLALLCSALAWQKKF 75
>gi|384485133|gb|EIE77313.1| hypothetical protein RO3G_02017 [Rhizopus delemar RA 99-880]
Length = 667
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 207/625 (33%), Positives = 302/625 (48%), Gaps = 102/625 (16%)
Query: 63 LGSFSTLGSQVNNQISGS---------QSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQE 113
L SF T ++V N +S S +S ++ S SK+P I SRTH QL Q+I E
Sbjct: 72 LNSFKT--AEVANPVSPSTNDTPLEANKSLSSAPLSSISKIPRIYVGSRTHKQLTQLISE 129
Query: 114 LK-TSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM 172
LK + Y P+M +LGSR+QLCIH +VS + + +N C L K + C + R +
Sbjct: 130 LKRNTQYTPRMTVLGSRDQLCIHPKVS--KSANKNEDCVNLLDK---QACGYAHRTKKVL 184
Query: 173 KNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
++ + DIED++++G+ CPY+ +R L ++ ++VF PYNY++DP RK + +
Sbjct: 185 AHSALQSTLRVWDIEDMISLGKEVRGCPYYTSRNLFESAEVVFCPYNYILDPVIRKVMNI 244
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNP 291
+ + SI+I DEAHN+E A SF+L L+ + I T+ +S E
Sbjct: 245 DLEGSIVILDEAHNMEDAARSAGSFELDDRALSM--------VKIELTQIIKSGFEV--- 293
Query: 292 DNFAILRALLLKLEKRI--AEVPINSKELG---FTKPGPYIYELLADLNITQET------ 340
IL L L + + A+ + KE G I E L +LNIT
Sbjct: 294 SAHQILEYLFDGLWEWVCSADNVYDIKEYERHICVWSGQKIIEKLKELNITAHVFESQFV 353
Query: 341 -AYKLIDIVEVAAELL--------------QEDKLQNKKSTTACRIESISN--------- 376
AY+ I AE + ++++ N T R + +SN
Sbjct: 354 PAYR---IASTHAETVRKESENRGLVDDNSEKEEKDNDAEVTVHRRKCLSNSSLNIVQGI 410
Query: 377 --ILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT----------LSWWCFNPG 424
I +FR+ Y ++ D K +R L +WC NPG
Sbjct: 411 FLIFGYLFREDSDYTEDYRMALMKRVDRGGKIYGAKKNNRKSTHDSTWAYKLGFWCLNPG 470
Query: 425 IAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
I Q+ + S+ILTSGTLSPMD+FA EL F ++E HVI Q+W +PVGP+
Sbjct: 471 IIFQDMC-AKTKSVILTSGTLSPMDTFASELDTKFSGKLEANHVIDPSQVWVSCLPVGPN 529
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
G L Y N +S +Y+ ++G I IA VP G+L F PSY +D+ + W L
Sbjct: 530 GTYLKGVYSNMESFQYQDDIGEAICQIAETVPFGILCFLPSYNALDKLMERWA------L 583
Query: 545 TTIWERICKHKKPVVEPRQSS--LFPLAI----------EDYMAKLKDTSTSGAVFFAVC 592
T I ER+ K + EP+ S +F AI ++Y+A KD GA+FFAV
Sbjct: 584 TGIKERMESKKLILSEPKGSDKKVFEKAINRFYDHIDKAKNYLADEKD----GAIFFAVY 639
Query: 593 RGKVSEGLDFADHAGRAVVITGMPF 617
RGKVSEG+DF + RAVV G+P+
Sbjct: 640 RGKVSEGIDFTNEYCRAVVAIGIPY 664
>gi|414886609|tpg|DAA62623.1| TPA: hypothetical protein ZEAMMB73_124196, partial [Zea mays]
Length = 631
Score = 272 bits (696), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 197/595 (33%), Positives = 292/595 (49%), Gaps = 64/595 (10%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATL 57
Y++ G+ VEFP++ Y QL +M +VI +L Q + +ALLESPTGTGK+L LLC+ L
Sbjct: 31 VYQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSAL 90
Query: 58 AWRKSLGSFSTL--------GSQVNNQISGSQSSVNSSQSGDSK-LPTILYTSRTHSQLR 108
AW++ S G V + + V ++ K P I Y +RTH+Q+
Sbjct: 91 AWQRHYPLRSPPAPDPLLHGGGFVPDDTQPQPTPVVPEKAVKKKNAPIIYYATRTHAQIS 150
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
QV++E + ++YR +M IL SR+ C+++ A +N + +K ++ + H +
Sbjct: 151 QVVREYRKTSYRVRMAILASRKHYCVNK-----FACASDN----IDEKWNAQKLSRHPSL 201
Query: 169 ADYMKNNPHLGD--EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
+G E DIEDLV +G+ CPYF + + + +VF PYNYLI P R
Sbjct: 202 --------QIGGCYEVHDIEDLVRVGQKAKGCPYFAAQHMAEAAQLVFCPYNYLISPVVR 253
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD 286
+ + ++ SI+I DEAHN+E I DA S D+ L + + I +G+ +
Sbjct: 254 RAMDIDISGSIIILDEAHNIEDIARDAGSIDIDEESLCY-LKQMLKLIHYGEVLQGELQN 312
Query: 287 ETLNPDNFAI---LRALLLKLEKRIAEVPINSKELGFTKPGPY------IYELLAD---- 333
N I L ++ L IAE N F P Y + EL
Sbjct: 313 LAANEAVAMIYQPLHDIIQALIGWIAEREDNLHNHEFGHPASYWTGEKAMNELQRAGISP 372
Query: 334 --LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSA 391
+ QE A K I AA + D + +A +ES+ + L F KG
Sbjct: 373 MYFPVLQECATKAIK----AASDTESDG-SHLSGGSAMTLESLFSSLSYFFAQKGRNSCD 427
Query: 392 YYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSF 451
Y R DV+ ++ T+S WC NP + QE + + S+ILTSGTLSPM SF
Sbjct: 428 YQLALQRFVKKEGKDVI--SSTCTMSLWCLNPAVVFQEIADRTL-SVILTSGTLSPMGSF 484
Query: 452 AQELKLNFPLRVENPHVITS-KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVN 510
EL + F +E PHVI + Q++A ++ GP+ +LN+SY+ D+ ++ ELG ++
Sbjct: 485 TSELGVQFEACMEAPHVINADSQVFAAVLSSGPTRQILNASYKTADNSSFQDELGASLEE 544
Query: 511 IARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS 565
I RIVP G L+FFPSY LMD+ W T W R+ K VEP+ SS
Sbjct: 545 ICRIVPGGALVFFPSYKLMDKLQVRWSQTGQ------WARLNAQKHVFVEPKGSS 593
>gi|159472757|ref|XP_001694511.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
gi|158276735|gb|EDP02506.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
Length = 897
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 197/614 (32%), Positives = 304/614 (49%), Gaps = 88/614 (14%)
Query: 106 QLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHH 165
Q+ QV++ELK + Y+P M IL +++ CI++ V LR + C L ++ C
Sbjct: 137 QIAQVVRELKRTAYKPSMAILAAKQHYCINKAV--LRTGRVDEECERLAREEAFP-CRFR 193
Query: 166 SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
++ + + DIE+L + CPYF R+L T ++VF PY+YL+DP
Sbjct: 194 NKGGGKQPMRVAVAAQVHDIEELSSACAKAKTCPYFTARDLALTAELVFCPYSYLLDPVV 253
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSS 285
R LG++ +S+LI FD + + C +D+ + R +++
Sbjct: 254 RAALGLDVGSSVLI----------------FDEAHNMEDVCREGGSMDLDLDALREVEAA 297
Query: 286 DE-----TLNPDNFAIL----RALLLKLEKRIAEVPINSKELGFTK-----PGPYIYELL 331
T P+ + L L+L L R E P GF + GP L
Sbjct: 298 LRLAAALTGRPEIYEPLAEGCNRLVLWL-ARYEERPDGMAASGFEEHEAVWQGPRALTAL 356
Query: 332 ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSA 391
++ ++ +L E A K +K+T ++ + + RD +S
Sbjct: 357 DEMGLSSHMVAELWRAYEQA-------KAFEEKATFTTEGDAANEAVPA-NRD----NSG 404
Query: 392 YYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSF 451
YRV V+ A+ A K R SGTL+P+DSF
Sbjct: 405 DYRVVVKRWIAHGA-----KDRRK-------------------------ASGTLAPLDSF 434
Query: 452 AQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVN 510
A EL F +R+E PHV+ +Q+WAG+VP GP G +L+S+++ + ++ E G ++
Sbjct: 435 ASELGTEFHVRLEAPHVVDMGRQVWAGVVPRGPGGGVLSSTFKEAATFRFQDEAGEAVLR 494
Query: 511 IARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL-FPL 569
+++PDG+L+F PSY L+D+ + WK T +W R+ K V E R++ F
Sbjct: 495 YCQVIPDGVLMFVPSYGLLDKLVTRWKATG------LWSRLEGCKTLVTEGREAGKGFED 548
Query: 570 AIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
A+ Y A ++ S G +F A+CRGK SEG+DFAD R V++ G+PF + D KVRLK+
Sbjct: 549 AMSRYYAAVR--SGRGGLFMAICRGKASEGIDFADQHARGVILLGIPFPAVKDTKVRLKK 606
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
EY D + G +L LSG+ WY+QQA RA+NQAVGR IRH++D+GAII DERF
Sbjct: 607 EYNDAGSGPTSGRPPSQRL--LSGDAWYSQQAFRALNQAVGRCIRHKYDWGAIILLDERF 664
Query: 690 AHPSRKSQISLWIQ 703
P R+ Q+S W++
Sbjct: 665 RGPGRQQQLSRWVR 678
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 45/60 (75%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y IRG +V FP + Y QL +MEK++++L + NALLE+PTG GKTL LLCA LAW+
Sbjct: 1 MPQYSIRGHEVHFPHQPYGVQLSFMEKMLRTLDEQGNALLEAPTGCGKTLSLLCAALAWQ 60
>gi|255078886|ref|XP_002503023.1| predicted protein [Micromonas sp. RCC299]
gi|226518289|gb|ACO64281.1| predicted protein [Micromonas sp. RCC299]
Length = 1566
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/585 (30%), Positives = 284/585 (48%), Gaps = 75/585 (12%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW-----RKSLG-SFSTLGSQVNNQ-- 76
M KV+++ NALLESPTG+GK+L LLC+ LAW R +LG F +V+++
Sbjct: 35 MGKVLKAADAGENALLESPTGSGKSLALLCSALAWQERWKRDNLGVKFGVNNVKVDDEGW 94
Query: 77 ---ISGSQSSV----NSSQSGDSK----LPTILYTSRTHSQLRQVIQELKTSNYRPKMVI 125
SG ++ N + S + K +P + Y +RTHSQ++QV++ELK + YRP MV+
Sbjct: 95 IVPSSGDPPALEDKENDAGSANDKKPPKVPRVYYATRTHSQIQQVVRELKRTAYRPAMVV 154
Query: 126 LGSREQLCIHREVSLLRGSAQNNACRFLCK-------------------KGTNRRCNHHS 166
LGSR+ CIH V RG N+ C+ L + + T R C +
Sbjct: 155 LGSRDHYCIHPSVRK-RGRNINDECKQLLERGVRGGGGGGDASGAPSSGEDTGRGCGYSH 213
Query: 167 RVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
N G EP+DIEDLV G+ CPYF + + ++VF PYNYL+DP R
Sbjct: 214 GAMKLAGNVSRQGAEPLDIEDLVVAGKKSRACPYFAAKHAAEGAELVFCPYNYLLDPAVR 273
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD 286
+ ++ K +I+I DEAHN+E +AAS D+ L + S S+
Sbjct: 274 SAMDIDVKGAIVILDEAHNVEDTSREAASCDIDLERLEEAAAAFAGVASNSGGDGEGRSN 333
Query: 287 ETLNPDNFAILRALLLKLEKRI--------AEVPINSKELGFTK------PGPYIYELLA 332
E D A+L ++ + + + P+ + GF + G + +
Sbjct: 334 EPDTTDTHAVLGGIVANVARWLRGASDLDHPRCPL--RPHGFERWMAVWSGGSAVARQMR 391
Query: 333 DLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKII------FRD-- 384
D+ + + + A+ + K + + +++ +L +R
Sbjct: 392 DMGLDPASVAAAEEAKRSVAKEANDAKTPADRRVSGAALKTAETLLTSARYALHGYRGGP 451
Query: 385 -----KGTAHSAYYRVHVREA--DANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGS 437
G H YR+ ++++ DA +D + A TLS W NP +A + +
Sbjct: 452 SGGPVAGAVHD--YRLVIQKSFKDAPGSDGERDVAV-TLSLWALNPALAFNDLAGPGGAR 508
Query: 438 -IILTSGTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSSYRNR 495
++LTSGTL+P+ SFA EL ++FP+R+E PH + KQ+WAG V VGP+G L +++
Sbjct: 509 CVVLTSGTLAPLSSFASELGVSFPIRMEAPHCVDVHKQVWAGAVGVGPAGAQLCGTFKTA 568
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
Y+ +LGN + R +P G+L+FFPSY L+D+ WK+T
Sbjct: 569 AEFAYQDDLGNALREWCRDIPHGVLVFFPSYSLLDRVTQRWKSTG 613
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 85/139 (61%), Gaps = 10/139 (7%)
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
GAV AV RGKVSEG+DFAD R VV+ G+P+ + D +V LKR Y + + S+G
Sbjct: 706 GAVLLAVVRGKVSEGIDFADANARGVVVVGVPYPNVKDKRVELKRLYNN-EGVSRG---- 760
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQP 704
LSG+ WY+QQA RA+NQAVGR +RHR+D+GAI+ DER+ + W++P
Sbjct: 761 -----LLSGDQWYSQQAFRALNQAVGRCLRHRNDHGAILLADERYLRDDMTRHLPKWLRP 815
Query: 705 HIQCYSKFGDVVYTLTRFF 723
++ + F D L FF
Sbjct: 816 AMRKCAGFEDSRRGLRSFF 834
>gi|224070887|ref|XP_002303281.1| predicted protein [Populus trichocarpa]
gi|222840713|gb|EEE78260.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/244 (56%), Positives = 162/244 (66%), Gaps = 37/244 (15%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEK-VIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M TYKIR I+V+FP EA DCQLVYMEK +IQSL N+CNALLESP T KT CLLC +LAW
Sbjct: 1 MSTYKIRRIEVDFPLEADDCQLVYMEKKIIQSLHNRCNALLESPAATRKTPCLLCPSLAW 60
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY 119
RKSLG +ST DS LP ++Y SRTHSQLRQVIQE
Sbjct: 61 RKSLGGYST-------------------APEDSNLPILVYASRTHSQLRQVIQE------ 95
Query: 120 RPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLG 179
+ QLC+H EVSLLRG QNN C C+K +C+H+SR +K NPHL
Sbjct: 96 --------DQLQLCVHEEVSLLRGKVQNNTCHLNCRKREKYQCSHYSRAE--VKPNPHLV 145
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
DEP+DIEDLV+IGRTFGPCPY + REL K D++FAPYNYLID +K L ++W N+ LI
Sbjct: 146 DEPVDIEDLVDIGRTFGPCPY-IPRELHKVNDLLFAPYNYLIDRGNKKSLTIDWDNNRLI 204
Query: 240 FDEA 243
FDEA
Sbjct: 205 FDEA 208
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 281 RGQSSDETLNPDNFAIL--RALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQ 338
RG T++ DN ++ A LLKLEKRIAEV I SKELGFTKPG YIYELLADLNI
Sbjct: 188 RGNKKSLTIDWDNNRLIFDEAFLLKLEKRIAEVSIESKELGFTKPGSYIYELLADLNIAN 247
Query: 339 ETAYKLIDIV 348
+TA K IDI+
Sbjct: 248 DTATKTIDII 257
>gi|443682315|gb|ELT86966.1| hypothetical protein CAPTEDRAFT_219962 [Capitella teleta]
Length = 1021
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 210/721 (29%), Positives = 330/721 (45%), Gaps = 142/721 (19%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
++ I GI V+FP + Y QL M K + + L+ LA
Sbjct: 14 SFSIGGIKVQFPGKPYPSQLAMMNKGL--------------------VVLVIIKLA---- 49
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR-P 121
+ +F+ LGS +Q + K+P I + +RTH Q+ Q+ +EL ++Y+
Sbjct: 50 IPAFA-LGS-----CDKAQCNCGIETKPKKKVPKIWFGTRTHKQIGQIARELGKTDYKHT 103
Query: 122 KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLG-D 180
+M IL SRE CIH ++S S +N+ C+ L ++G R + + A K+ G
Sbjct: 104 RMSILSSREHTCIHPQIS--SSSYKNDECKAL-REGPGCRFHEQVKRAVSQKSIASQGLQ 160
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
+ +E+ V TF C R + + K I+I
Sbjct: 161 QAWQLEEFV----TF--C--------------------------LRNKMDISLKGEIVIL 188
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DE HN+E C +AAS+ + LT + + ++ I+ E P ++ L
Sbjct: 189 DEGHNIEDACREAASYTVQEKQLTEGVQDLQHLIE-----------EKFKPGEHGVMMKL 237
Query: 301 LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYK-------LIDIVEVAAE 353
L I + ++ E G E++A + A+ L +I E ++
Sbjct: 238 LQGFVDLIGKNQ-DALEDGDQSKVWGGMEMIAQIESVGIGAHNVELYQRCLNEITEEESD 296
Query: 354 --LLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR----------------- 394
+E K KS T +E + ++K D H+ YR
Sbjct: 297 PKKREEQKFLKAKSQTLNALEGLLMVIKFALAD-NHKHADDYRCCVSVMTAFNTHQIMPS 355
Query: 395 --------VHVREADANAADVL-KGKASRT-------LSWWCFNPGIAMQEFSRLEVGSI 438
+++R+A + L + K +R L++WC NP +A L+ S+
Sbjct: 356 RLAITKTTMYIRQATSPRNGWLSRRKGNRMQQETVCFLNFWCLNPAVAFGSMG-LDARSV 414
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
ILTSGTLSPM SF EL +FP+++E HVI+ Q+W G + GP G L SY+N +++
Sbjct: 415 ILTSGTLSPMTSFQSELGASFPIQLEANHVISPSQVWVGTISHGPKGGSLLGSYQNSETL 474
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
Y+ E+G I+++ +IVPDG+L F PSY + + WKNT +W + HK+
Sbjct: 475 RYQDEIGELILHVCQIVPDGVLCFLPSYKSLQKLADRWKNTG------LWAQFMNHKQVF 528
Query: 559 VEPRQSSL--FPLAIEDYMAKL--KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
E R S F ++++ + +D +G +FFAVCRGKVSEG+DF+D RAV+ G
Sbjct: 529 SESRASDKENFDEIMKNFYDAIHDEDQEVNGGLFFAVCRGKVSEGMDFSDRNARAVIAIG 588
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+PF D +V LK++Y ++ Q +G LSG DWY QA RA+NQA+GR IR
Sbjct: 589 IPFPNYKDAQVELKQKYNNMFGQKRG---------LLSGRDWYEIQAYRALNQALGRCIR 639
Query: 675 H 675
H
Sbjct: 640 H 640
>gi|170579413|ref|XP_001894820.1| BRCA1-binding helicase-like protein BACH1 [Brugia malayi]
gi|158598443|gb|EDP36331.1| BRCA1-binding helicase-like protein BACH1, putative [Brugia malayi]
Length = 962
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 228/773 (29%), Positives = 349/773 (45%), Gaps = 147/773 (19%)
Query: 73 VNNQISGSQ-------SSVNSSQSGDSKLP--TILYTSRTHSQLRQVIQELKTSNYRP-- 121
V+N++ G+ S+ + ++ + LP TI Y +RTH Q+ QV++E Y
Sbjct: 205 VSNKLEGATLLDDSKLSTKDVTEESHTCLPRVTIYYGTRTHKQISQVVKEFSRLPYSQDG 264
Query: 122 --KMVILGSREQLCIHREVSLLRGSAQNNACR-FLCKKGTNRRCNHHSR--------VAD 170
K IL SRE +CI+ + + N+ C+ F+ G + R +
Sbjct: 265 VIKHTILASREYMCINPAIQV--NDDINSKCKEFISSDGIGCSYKNAMRGKYEKPGAIRR 322
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGP--CPYFMT-RELQKTVDIVFAPYNYLIDPWFRK 227
+ + D+EDLV + P CPYF T R L DI+F P++YLIDP R
Sbjct: 323 LIAQTTRKVNYVWDVEDLVEALKCSTPSLCPYFSTARVLIDDADIIFCPFSYLIDPIVRT 382
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLT---------------------AC 266
G+ KN+I+I DEAHN+E +C +A SF L A
Sbjct: 383 NSGLSLKNTIVILDEAHNVEDVCREAVSFTFMERELVGAAADLYEKATELEKELAKVDAK 442
Query: 267 ISEAKNCIDISSTRRGQSSD--ETLNPDNFAILRALLLKLEKRIAEV--------PINSK 316
I + I+ R G+ + E L +F + + L K+ V P+ +
Sbjct: 443 IVAEEGLIETQDNRAGRYKECLEILK-GHFKTVISFLNKILDWFVNVSSNALQSAPMKND 501
Query: 317 ELGFTKPGPYIYELLA--DLNITQET----AYK-----LIDIVEVAAELLQEDKLQNKK- 364
L +T ++ A DLNI +T AY I I + E D+ Q+
Sbjct: 502 RLTYTFNWEKLFTTFANNDLNIFDKTGKGTAYSGLLEAFISITDTGNE---NDEFQSYLK 558
Query: 365 -----STTACRIESISNILKIIFRDKG-TAHSAYYRV---HVREADANAADVLKGKA--- 412
++TA +E K FRD TA+ + + V A +N D+ K +
Sbjct: 559 YYKPFASTAVCVEKFLYFFKAYFRDDNRTAYKLFVCIDKPFVPYAQSNLFDITKNSSDSV 618
Query: 413 -----------------SRT---------------LSWWCFNPGIAMQEFSRLEVGSIIL 440
S+T +S+WC P +A + + S+IL
Sbjct: 619 DILDMSSYEKEKEVWLDSKTRLKGYREVKYGYRVAISFWCMRPSLAYIDAFK-GCRSVIL 677
Query: 441 TSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR--NRDSI 498
SGTLSP D+F EL F +E +I +QI+A ++P GPSG L +YR NRD
Sbjct: 678 ASGTLSPTDTFRTELGTTFQQEMEGNQIIPDEQIFAAVIPSGPSGEKLCGTYRIINRDD- 736
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
+ +E+ + ++ +I+P G+L FF SY ++DQ + T I +I K +
Sbjct: 737 RFIREISLILSHVCKIIPKGVLCFFSSYRVLDQIY------EYMETTGILRQIQNVKLVL 790
Query: 559 VEPRQSSLFPLAIEDYMAKLKDT-----STSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
EPR+SSL + Y + ++ +GA+ AV RGK+SEG+DF D R VV
Sbjct: 791 KEPRRSSLMNTVMMQYERAIVNSLDIGPQCTGALLMAVFRGKISEGIDFTDDRARCVVTV 850
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+PF + D +V K++Y D TKL LSG++WY QA RA+NQA+GR +
Sbjct: 851 GIPFPSAVDEQVIEKKKYNDDYC---------TKLQLLSGDEWYTMQAYRALNQALGRCL 901
Query: 674 RHRHDYGAIIFCDERF----AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRF 722
RHR D+G+I+ DER A+P+ K +IS WI+ ++ + + + L F
Sbjct: 902 RHRSDWGSILMLDERLLQTQANPNAK-KISRWIRKQLRPLTNYEHFLNELANF 953
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 6 IRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
I G ++ P + Y Q + K++ SL+NK NAL+ESPTG+GKTL LL A+ AW L
Sbjct: 64 ICGYMIKLPPNIQPYATQRTMIAKILISLKNKLNALIESPTGSGKTLGLLSASCAW---L 120
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKL 94
+ +Q ++ + + SG+ L
Sbjct: 121 ERYKKERTQSRDECKACHNGSGNGHSGNKTL 151
>gi|414886610|tpg|DAA62624.1| TPA: hypothetical protein ZEAMMB73_124196 [Zea mays]
Length = 1167
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 191/594 (32%), Positives = 286/594 (48%), Gaps = 74/594 (12%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATLA 58
Y++ G+ VEFP++ Y QL +M +VI +L Q + +ALLESPTGTGK+L LLC+ LA
Sbjct: 32 YQVGGVPVEFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALA 91
Query: 59 WRKSL--------------GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTH 104
W++ G F +Q + +V + P I Y +RTH
Sbjct: 92 WQRHYPLRSPPAPDPLLHGGGFVPDDTQPQPTPVVPEKAVKKKNA-----PIIYYATRTH 146
Query: 105 SQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNH 164
+Q+ QV++E + ++YR +M IL SR+ C+++ A +N + +K ++ +
Sbjct: 147 AQISQVVREYRKTSYRVRMAILASRKHYCVNK-----FACASDN----IDEKWNAQKLSR 197
Query: 165 HSRVADYMKNNPHLGD--EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
H + +G E DIEDLV +G+ CPYF + + + +VF PYNYLI
Sbjct: 198 HPSL--------QIGGCYEVHDIEDLVRVGQKAKGCPYFAAQHMAEAAQLVFCPYNYLIS 249
Query: 223 PWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG 282
P R+ + ++ SI+I DEAHN+E I DA S D+ L + + I +G
Sbjct: 250 PVVRRAMDIDISGSIIILDEAHNIEDIARDAGSIDIDEESLCY-LKQMLKLIHYGEVLQG 308
Query: 283 QSSDETLNPDNFAI---LRALLLKLEKRIAEVPINSKELGFTKPGPYIY--ELLADLN-- 335
+ + N I L ++ L IAE N F P Y + + +L
Sbjct: 309 ELQNLAANEAVAMIYQPLHDIIQALIGWIAEREDNLHNHEFGHPASYWTGEKAMNELQRA 368
Query: 336 --------ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGT 387
+ QE A K I AA + D + +A +ES+ + L F KG
Sbjct: 369 GISPMYFPVLQECATKAIK----AASDTESDG-SHLSGGSAMTLESLFSSLSYFFAQKGR 423
Query: 388 AHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSP 447
Y R DV+ T+S WC NP + QE + + S+ILTSGTLSP
Sbjct: 424 NSCDYQLALQRFVKKEGKDVISSTC--TMSLWCLNPAVVFQEIADRTL-SVILTSGTLSP 480
Query: 448 MDSFAQELKLNFPLRVENPHVITS-KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGN 506
M SF EL + F +E PHVI + Q++A ++ GP+ +LN+SY+ D+ ++ ELG
Sbjct: 481 MGSFTSELGVQFEACMEAPHVINADSQVFAAVLSSGPTRQILNASYKTADNSSFQDELGA 540
Query: 507 TIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVE 560
++ I RIVP G L+FFPSY LMD+ W T W R+ K V+
Sbjct: 541 SLEEICRIVPGGALVFFPSYKLMDKLQVRWSQTGQ------WARLNAQKHVFVD 588
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 64/115 (55%), Gaps = 15/115 (13%)
Query: 622 DPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
D +V+LKR Y D YK +K LSG +WY QA RA+NQA GR IRH+ DYG
Sbjct: 599 DVQVKLKRRYND--------SYKSSK-HLLSGSEWYCHQAFRALNQAAGRCIRHKSDYGG 649
Query: 682 IIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR--EERI----CG 730
II DER+ IS W++ I+ Y F + + L +FF+ +E+I CG
Sbjct: 650 IILIDERYQDDRNVLYISKWLRNAIKKYDSFQETMAKLQKFFQNAQEKIKIKDCG 704
>gi|74203152|dbj|BAE26258.1| unnamed protein product [Mus musculus]
Length = 527
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 258/456 (56%), Gaps = 53/456 (11%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP + G+ V+FPF+ Y CQ YM KV++ LQ K N +LESPTGTGKTLCLLC+TLAW+
Sbjct: 1 MPRVVLNGVTVDFPFQPYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQ 60
Query: 61 KSL-GSFSTL--GSQVNNQISGSQS---------SVNSSQSGDSKLPTILYTSRTHSQLR 108
+ L + S+L +V ++ S++ + S + +P I+Y SRTHSQL
Sbjct: 61 QHLRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLT 120
Query: 109 QVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR 167
QVI+EL+ + YRPK+ +LGSREQLCIH EV + Q + CR KK +R C+ ++
Sbjct: 121 QVIRELRNTAYRPKVCVLGSREQLCIHPEVKKQESNHMQISLCR---KKVASRSCHFYNN 177
Query: 168 V-ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
V A +++ + L +DIEDLV G CPY+++R +++ DI+F PYNYL+D R
Sbjct: 178 VEAKFLEQD--LATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLDAKSR 235
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS--TRRGQ- 283
K ++ K +++IFDEAHN+E IC ++ASFDL+ + + + ++ + T++G+
Sbjct: 236 KAHSIDLKGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLEEQARVTQQGEL 295
Query: 284 ---------SSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
SS + ++ A L+ +LL+LE+ I V + + G TKPG YI+EL A+
Sbjct: 296 QQEFIVDTSSSGLNMELEDIAKLKMILLRLEEAIDAVQLPGDDRGVTKPGSYIFELFAEA 355
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR----------- 383
IT +T I+E +++Q + T ++ + +I++I+F
Sbjct: 356 QITFQTKGC---ILESLDQIIQHLAGRTGVFTNTAGLQKLMDIIQIVFSVDPPEGSPGSL 412
Query: 384 -DKGTAHSAYYRVHVREADANAADVLKGKASRTLSW 418
G +HS Y+VH+ ++ + A R+ +W
Sbjct: 413 VGLGISHS--YKVHIHPETSH-----RRAAKRSDAW 441
>gi|429965550|gb|ELA47547.1| hypothetical protein VCUG_00978 [Vavraia culicis 'floridensis']
Length = 855
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 207/756 (27%), Positives = 340/756 (44%), Gaps = 127/756 (16%)
Query: 5 KIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
KI I + FPF+ Y Q++ K+I L+NK ++ESPTGTGK++ +LCA LAW
Sbjct: 2 KINSITIAFPFKPYPAQILTCSKIIDCLKNKKTGIIESPTGTGKSIAILCAVLAWH---- 57
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMV 124
+ + D++ I SRTH QL Q++ +L+++ Y PK+
Sbjct: 58 ----------------------AHNRDTR---IFICSRTHKQLDQLVAQLRSTVYTPKVC 92
Query: 125 ILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPID 184
+L SR LC++R + L+G N+ CR L KKG R R+ +GD D
Sbjct: 93 VLASRRVLCLNR--NALKGDV-NSTCRELVKKGECRYFMGKERLV------KSIGDVH-D 142
Query: 185 IEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH 244
IE+L +G CPY+ +R L ++ I F PYNY++DP R +G+E KNS++I DEAH
Sbjct: 143 IEELRQMGEKCTGCPYYASRMLSESATITFMPYNYVVDPMVRHTMGIELKNSVVIVDEAH 202
Query: 245 NLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKL 304
N+E C A S +L++ + + E +S+ RR + E L NF LR +
Sbjct: 203 NIEDACRSAGSIELTNNTIDIMLKEL-----VSAYRRAEEYKEDLMVLNF-FLRKMRDVS 256
Query: 305 EKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK 364
+ ++ + ++ F G I +LL + E LI + + A + ++L++
Sbjct: 257 DVKMTRSNLENECACF--KGDEIVQLLTHKQVVPE----LIAKMRMNALFKKNEELKDAF 310
Query: 365 STTACR-IESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASR--TLSWWCF 421
S + IES+ ++L +IF K +++ ++ G A T+++
Sbjct: 311 SLMFLQTIESLVSVLMLIFSGKAPSYA----------------LIVGGAPGIPTINFMLL 354
Query: 422 NPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPV 481
+P + + V ++++ SGTL+P + EL F + P + A I+
Sbjct: 355 DPDVMFNAVVQ-HVHALVVLSGTLTPFSAVENELNHRFAYSLVAP-AVAQHTFCATILKN 412
Query: 482 GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP-DGLLIFFPSYYLMDQCIACWKNTS 540
+G + +Y + +S EY E+ + I ++ V G ++F PSY+ +++ + S
Sbjct: 413 TRTGADMLGTYAHAESFEYVDEVIDVIYGVSESVQGGGTVVFLPSYHAVNKVFGRMRMRS 472
Query: 541 HGN--------------------LTTIWERICKHKKPVVEPRQSSL-FPLAIEDYMAKLK 579
G+ T + I +K P + ++ IE+ +
Sbjct: 473 TGSEAGMRAGAVFGNKAWVNKMRTDTTNKSIGMNKNPFFTRKMANHSVNNRIENVFIETN 532
Query: 580 DTSTS----------GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
D S + AV RGK SEG DF D RAV++ GMP + + V L R
Sbjct: 533 DKSFDKTFAAYKKHHNPILLAVYRGKASEGTDFKDRLARAVILIGMPCPNIKEVSVELMR 592
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
+ WY Q +AVNQA+GR +RHR D+G + D R+
Sbjct: 593 NHR---------------------PGWYENQIFKAVNQAIGRCVRHRLDWGGVFLVDVRY 631
Query: 690 AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
K ++ W + + FGDVV F R+
Sbjct: 632 RRD--KERLCGWCRDRMVYGEYFGDVVEDFRGFVRK 665
>gi|403335726|gb|EJY67043.1| Regulator of telomere elongation helicase 1 [Oxytricha trifallax]
Length = 1454
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 203/358 (56%), Gaps = 27/358 (7%)
Query: 411 KASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
+ +R+L +WCFNPG+ Q+ L S+ILTSGTL PM SF +EL ++FP+++EN HVI+
Sbjct: 531 RTARSLGFWCFNPGLGFQKIVNLNPRSLILTSGTLYPMSSFQKELMMDFPIKIENKHVIS 590
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+Q I+ G G+ N +++ R++ + +LG T++ I + P G+LIFFPSY ++
Sbjct: 591 KEQASISILTNGVKGHEFNFAHKFRENEDQLDDLGETLLRITEVTPGGILIFFPSYQMLH 650
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+ W+ H L ERI K + EPR SS + I + + T GA+ FA
Sbjct: 651 KLYELWE---HSGLIKRLERI---KTVLQEPRDSSHYKYVITSF---YQSVYTKGAIIFA 701
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
VCRGK+SEGLDF+D A R V+I G+P+ DPK LK+ YLD +T+
Sbjct: 702 VCRGKISEGLDFSDDAARCVIIIGIPYPMTLDPKTILKKHYLD-----------KTRNDG 750
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS 710
L+G WY QQA+RA NQA+GRVIRH DYG II D+RF + +++ QI+ W++ + +
Sbjct: 751 LTGHTWYQQQATRATNQAIGRVIRHVQDYGNIILIDKRFDNHTQRKQITNWLRDSVVVFQ 810
Query: 711 KFGDVVYTLTRFFRE-------ERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEE 761
+ FF E ++ +KL E+ D+ + VDLL + EE
Sbjct: 811 DAKKAIDKYLDFFVEMKKRNFVPKVQQLAQVKLDFPEIDDDLNLKETVDLLKSKAQEE 868
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 154/284 (54%), Gaps = 33/284 (11%)
Query: 21 QLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGS 80
+L Y++ + Q+ + NALLESPTGTGKTLCLL A LAW K +
Sbjct: 113 KLRYLKHIDQACKRGLNALLESPTGTGKTLCLLTAGLAWLKKIRE--------------- 157
Query: 81 QSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSL 140
S++ + LP I+Y SRTHSQ+ QV+ ELK + Y+PK+ ++GSR+QLC++ V+
Sbjct: 158 -----SNEVDEKDLPKIIYCSRTHSQISQVMNELKHTAYKPKVCLIGSRDQLCVNPMVNT 212
Query: 141 LRGSAQNNACRFLCKKGTNRR------CNHHSRVADYMK-NNPHLGDEPIDIEDLVNIGR 193
+G + N+ LCKK +R C+ D + N G + D+EDL +G
Sbjct: 213 HKGMSLNS----LCKKVREQRKDSPNCCSFFKNTGDSVTPNGFEWGIQ--DVEDLHKLGT 266
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADA 253
CPY++ + K D++ PYNYLIDP R+ V+++NSI+I DEAHN+E + D
Sbjct: 267 KNIVCPYYLQKSRIKYADLILMPYNYLIDPKIRENFKVDYENSIIIMDEAHNVERVAEDV 326
Query: 254 ASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAIL 297
ASF++ L + E + TR D TL + + I+
Sbjct: 327 ASFEIHINQLHTVLGELHDLDKDFKTRVLDKPDSTLGQNIYEII 370
>gi|357631598|gb|EHJ79067.1| FancJ-like protein [Danaus plexippus]
Length = 830
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 191/644 (29%), Positives = 297/644 (46%), Gaps = 73/644 (11%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRPK--MVILGSREQLCIHREVSLLRGSAQNNACR 151
LP I Y +RTH QL QV+QE + Y M IL SRE CI ++ + R ++N+ CR
Sbjct: 195 LPIIYYGARTHKQLEQVVQEFSKTVYAENALMTILSSREHSCI-KDFDIKRWPSKNDMCR 253
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGRTFGPCPYFMTRELQ 207
C K N + S V Y N+ L + +E L+++GR CPY+ R++
Sbjct: 254 G-CTKNQNSSDSETSCV--YYDNHKLLKHSTLPRAFSLETLLSVGRKKKACPYYAARKMA 310
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
IVF PY+YLI+P RK + + +N+++I DEAHN+E IC +AA+F + + +
Sbjct: 311 AVAHIVFCPYSYLIEPAIRKSMQINLENNVVIIDEAHNIEDICREAATFTFTKLQMENAL 370
Query: 268 SEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK----------RIAEVPINSKE 317
E K SS N + + L LE+ + P N
Sbjct: 371 KEMK----------AASSFRFANDEAIDYITYLQTSLEEWCLWFANQKPLLDNQPRNGAA 420
Query: 318 LGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK--LQNKKSTTACRIESIS 375
+ E L + +I Q+ + + + ++D L +T IE++
Sbjct: 421 SEYAWDVHQFVETLNNHSIGQKQYPEFNKHAGIFCKKFRDDPRLLVGITQSTNTIIENLD 480
Query: 376 NILKIIFRDKGTAHSAYYRVHVREADANAAD-------------VLKGKASRTLSWWCFN 422
+L +FR+ GT Y + VR+ ++ A VL S TL C N
Sbjct: 481 TVLGYLFRNSGTCMDDYKPILVRKIESYDASYNHNWRKSNFEQKVLPESLSLTLC--CLN 538
Query: 423 PGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVG 482
P + S L ++L SGTL+PM S EL +F V + I+ ++W G + G
Sbjct: 539 PAVLFA--SVLSSRCVVLASGTLTPMASLHSELGTHFTHAVSATYEISKDRVWVGSLKSG 596
Query: 483 PSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHG 542
SG + + + +LG + + + P G+L F PSY LM+ + W+ SH
Sbjct: 597 TSGEKICCISKYTSVSNVQDDLGEMVYGVCDVTPHGVLCFLPSYRLMNLLVKRWR-YSH- 654
Query: 543 NLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT---STSGAVFFAVCRGKVSEG 599
+WER+ K VE + M K D + GA+ AV RGKV+EG
Sbjct: 655 ----LWERLEAKKHVFVESTH-----MKTHVNMMKAFDNCVGTDRGALLLAVYRGKVAEG 705
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQ 659
+DF DH RAV+ G+P+ + D V K +Y D ++++ + L+G +W
Sbjct: 706 MDFKDHQARAVIAIGIPYPS-KDRAVEEKMKYNDKYSKNR---------NLLNGREWLKI 755
Query: 660 QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
QA RA+NQAVGRV+RH D+G ++ D R+ P ++ W++
Sbjct: 756 QAYRALNQAVGRVMRHVGDWGGVLLVDSRYQEPQYSEHLAQWVK 799
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
I G++V P E Y CQ+V M KVI+++ N LLESPTGTGKTL LLC++LAW+
Sbjct: 14 ILGVEVVLPIEPYRCQMVVMSKVIKAINEGQNCLLESPTGTGKTLALLCSSLAWQ 68
>gi|393908189|gb|EJD74948.1| CBR-DOG-1 protein [Loa loa]
Length = 979
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 227/781 (29%), Positives = 357/781 (45%), Gaps = 140/781 (17%)
Query: 65 SFSTLGSQVNN--QISGSQSSVNSSQSGDSKLP--TILYTSRTHSQLRQVIQELKTSNYR 120
SFS+ +++ + S+ S ++ G + LP TI Y +RTH Q+ QV++E +Y
Sbjct: 201 SFSSTTNKLEGVASLDDSKISKKDAEEGHTCLPRVTIYYGTRTHKQISQVVKEFSRLSYG 260
Query: 121 P----KMVILGSREQLCIHREVSLLRGSAQNNACR-FLCKKGTNRRCNHH---------- 165
K IL SRE +CI+ + + N C+ F+ G C++
Sbjct: 261 QEGVIKHTILASREHMCINPAIRV--SDDINGKCKEFISSDGIG--CSYKNSMRGKYERP 316
Query: 166 SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGP--CPYFMT-RELQKTVDIVFAPYNYLID 222
S V + + D+EDLV + P CPYF T R L DI+F P++YLID
Sbjct: 317 SAVRRLVAQTTGQMNYIWDVEDLVKALKCSTPSLCPYFSTARVLIDDADIIFCPFSYLID 376
Query: 223 PWFRKGLGVEWKNSILIFDEAHNLE-----------------GICAD----AASFDLSSG 261
P R G+ KN+++I DEAHN+E G AD AA +
Sbjct: 377 PIIRANSGLSLKNTVVILDEAHNVEDVCREAVSFTFMERELVGATADLYQKAAELEKELT 436
Query: 262 LLTACISEAKNCIDISSTRRGQSSD--ETLNPDNFAILRALLLKLEKRIAEVPINSKE-- 317
+ A + + I+ +R G+ + E + +F + L K+ +V N+ +
Sbjct: 437 KVDAKVVAEEGLIETEDSRAGRYKECLEVMKG-HFKTVINFLNKILDWFVDVSSNALQSA 495
Query: 318 ------LGFTKPGPYIYELLA--DLNITQET----AYK--LIDIVEVAAELLQEDKLQNK 363
L +T ++ L DL+I +T AY L + + + D+ Q+
Sbjct: 496 SMKNDRLTYTYKWEKLFTTLTSNDLDIFSKTGKGTAYSGLLEAFISITGACNENDEFQSY 555
Query: 364 K------STTACRIESISNILKIIFRDKG-TAHSAYYRVH-------------VREADAN 403
+TTA +E K FRD TA+ + + V + +N
Sbjct: 556 LKHYKLCATTAICVEKFLYFFKSYFRDDNRTAYKLFVCIDKPFVPYSQSNIFDVAKNSSN 615
Query: 404 AADVL-----------------KGKASR--------TLSWWCFNPGIAMQEFSRLEVGSI 438
+ D+L + K R +S+WC P +A + + S+
Sbjct: 616 SIDILDMSSYDKEKEEWLDSTIRLKGYREVKYGYRVAISFWCMRPSLAYTDAFK-GCRSV 674
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR--NRD 496
IL SGTLSP D+F EL F +E +I +QI+A ++P GP+G L +YR NRD
Sbjct: 675 ILASGTLSPTDTFRTELGTTFHQEMEGNQIIPDEQIFAAVIPSGPNGEKLCGTYRIINRD 734
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
+ +E+ + ++ +I+P G+L FF SY ++DQ + T I +I K
Sbjct: 735 D-RFIREISLILSHVCKIIPKGVLCFFSSYRVLDQIY------EYMETTGILRQIQNIKL 787
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDT-----STSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
+ EPR+SSL + Y + ++ +GA+ AV RGKVSEG+DF D R VV
Sbjct: 788 VLKEPRRSSLMNTVMMQYENAIVNSFDFGPQCTGALLMAVFRGKVSEGIDFTDDRARCVV 847
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
G+PF + D +V K++Y D TKL LSG++WY QA RA+NQA+GR
Sbjct: 848 TVGIPFPSAMDEQVVEKKKYNDDYC---------TKLRILSGDEWYTMQAYRALNQALGR 898
Query: 672 VIRHRHDYGAIIFCDERF----AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+RHR D+G+I+ DER A+P+ K ++S WI+ ++ + + + LT F +
Sbjct: 899 CLRHRSDWGSILMLDERLLQIRANPNAK-KVSRWIREQLRPLTNYEHFLSELTSFVNKME 957
Query: 728 I 728
I
Sbjct: 958 I 958
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 6 IRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
I G V+ P + Y Q + K++ +L+NK NAL+ESPTG+GKTL LL A+ AW
Sbjct: 61 ICGYMVKLPPNIQPYATQRTMIAKILTALKNKLNALIESPTGSGKTLGLLSASCAW 116
>gi|338711555|ref|XP_001917874.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like, partial [Equus caballus]
Length = 1219
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 192/685 (28%), Positives = 332/685 (48%), Gaps = 91/685 (13%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S +++ Q G S++P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H +V
Sbjct: 228 SSNTIKKDQGGKSRIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPDV 287
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCNHHS---RVADYMKNNPHLGDEPIDIEDLVNIGRTF 195
+ +N C L + C + +++D K + DIE+LV +G+
Sbjct: 288 --VGNFNRNEKCMELLDGKNGKSCYFYHGIHKISDQHKLQTEGISKAWDIEELVTLGKKL 345
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ REL + DIVF PYNYL+D R+ + + K I+I DEAHN+ ++AS
Sbjct: 346 KACPYYTARELIEDADIVFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIVDCARESAS 405
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
+ ++ L E + ++ + ++ E L ++++ L E + +S
Sbjct: 406 YSITEVRLRFARDELDSMVNNNIRKKDH---EPLRAVCYSLINWLEANSEHLVERDYESS 462
Query: 316 KELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKS------- 365
++ G + L + IT TA I +A L +E+K + K+S
Sbjct: 463 CKIW---SGSEMLLNLHKMGIT--TATFPILQGHFSAVLQKEEKVLPIHGKESREVPIIS 517
Query: 366 -TTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADVLKGKASR 414
+T ++ + +L +FR + + + Y+V +++ +D N L R
Sbjct: 518 ASTQIMLKGLFMVLDYLFR-QNSRFADDYKVAIQQTYSWVNQTDPSDKNEFFALPKNKKR 576
Query: 415 --------TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F +++E
Sbjct: 577 LRQKTAVHVLNFWCLNPAVAFSDING-KVWTIVLTSGTLSPMKSFSSELGVTFTIQMEAN 635
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HVI + Q+W G + GP G L ++++ ++ E++ E+G ++++ + V G+L F PSY
Sbjct: 636 HVINNSQVWVGTIGSGPKGRNLCATFQRTETFEFQDEVGALLLSVCQTVSQGILCFLPSY 695
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLKDTSTS 584
L+++ W T +W + K +VEP+ + + F ++ Y +K
Sbjct: 696 KLLEKLKERWL------YTGLWHNLELVKTVIVEPQGGEKTDFEELLQVYYDAVKYKGE- 748
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
KV L G V I +V LKR Y D ++ +G
Sbjct: 749 ----------KVKNKLQ-----GNIVRI-----------QVELKRRYNDQHSKLRG---- 778
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLWI 702
L G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++P+R S +S W+
Sbjct: 779 -----LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPNRYISGLSKWV 833
Query: 703 QPHIQCYSKFGDVVYTLTRFFREER 727
+ IQ +S F + +L F ++ +
Sbjct: 834 RQQIQHHSTFESALESLAEFSKKHQ 858
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 7 YTIGGVKINFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 66
>gi|313233484|emb|CBY09656.1| unnamed protein product [Oikopleura dioica]
Length = 675
Score = 255 bits (652), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 196/719 (27%), Positives = 340/719 (47%), Gaps = 91/719 (12%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ---VNNQISGSQ 81
M+ + +++++ + ESPTGTGK+L ++C+ + W K + + L +Q V+ + G
Sbjct: 1 MKAIYTAIEDRKIGIFESPTGTGKSLSIICSAIKWLKDHRNRAQLVTQQPKVDKEEDGEL 60
Query: 82 SSVNSSQ-------SGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVI--LGSREQL 132
++ G + I Y SRTHSQL Q ++E++ S ++ + + + SR L
Sbjct: 61 DWLDLDSDYDDDDGEGQEFVEKIFYASRTHSQLSQFVKEIRKSPFKDSVTVAPIASRATL 120
Query: 133 CIHREVSLLRGSAQ-NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNI 191
C++ +V L +Q N +C+ L K N+ C ++ + ++ + + +DIED V
Sbjct: 121 CVNPKVKKLSTVSQMNESCKQLNK---NQGCEFKTKKGLSLLSH-RMNNTLMDIEDTVKF 176
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G CP++ RE TVD+ PYN L+ P R+ G+ KNS++I DEAHNL G
Sbjct: 177 GNENKCCPFYGAREALPTVDVCVLPYNLLVVPSARESCGINLKNSVVIIDEAHNLAGAIE 236
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILR---ALLLKLEKRI 308
S ++ LT + S R LNP+N ++ A+L+ L K +
Sbjct: 237 SCYSVGVTLNALTEAYKQLNAYKAKFSAR--------LNPENLMFVKQLLAVLIGLGKDL 288
Query: 309 AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTA 368
V NS++ T + E+L D + ++L+ + KS A
Sbjct: 289 KRVN-NSEQKIVT-----VREILNDAKLDNINLFELLKYMT--------------KSLIA 328
Query: 369 CRI----ESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK----GKASRTLSWWC 420
++ + ++N K+I + K A +V ++K GKA + +
Sbjct: 329 HKVKGFADKVANTPKVIVKPKENALKEMLTKNVLITPGADLRIIKNANDGKAQ--MKVFL 386
Query: 421 FNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-------KLNFPLRVENPHVITSKQ 473
NP E S+ + S++L GT+ P + +L KL++ HVI+ Q
Sbjct: 387 LNPASIFAEISK-DARSVLLAGGTMKPYQTLKDQLFAEVSSEKLSW---FNCEHVISDSQ 442
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+ A ++ GP+ ++ N+D+ KQ+LG +V+I + VP G+++FF SY
Sbjct: 443 MNALVLQRGPTNERFIFNHSNKDNFAMKQDLGRALVDIVQTVPSGVVVFFASYKQETMFY 502
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+K + ++I K EP++++ +E Y ++ GA+ FAV
Sbjct: 503 EMFKKSG------FLQQIENVKTLFREPKETAGVAPLLEKYEMSVR---VRGAILFAVVG 553
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG++F+D RAV++ G+P+ + +++L+ + L+ ++ GG G
Sbjct: 554 GKVSEGINFSDGLCRAVIMIGVPYPDIKSAEIKLRMDTLN--SKRPGG-----------G 600
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF 712
+ Y RAVNQ VGR IRHR D I+FCD R++ P + + WI+ + Y F
Sbjct: 601 QMLYTGLCMRAVNQCVGRAIRHRDDSSLILFCDGRYSEPRVRDHLPDWIKTRLTSYDNF 659
>gi|350646191|emb|CCD59102.1| brca1 interacting protein C-terminal helicase 1 brip1, putative
[Schistosoma mansoni]
Length = 725
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 297/660 (45%), Gaps = 132/660 (20%)
Query: 182 PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFD 241
P DIEDLV CPYF +R L ++ DI+F PY+YL+DP R +E + I+I D
Sbjct: 57 PWDIEDLVQALIPIPSCPYFCSRSLARSADIIFCPYDYLLDPLNRSATSLEVTDHIIILD 116
Query: 242 EAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALL 301
EAHN+E +AASF ++ L + + + + S TL ILR +
Sbjct: 117 EAHNIEDASREAASFTITEQQLKSARDDLEGLRIVGFEPEACS---TLIAMVDGILRVMQ 173
Query: 302 LKLEKRIAEVPINSKELGFTKPGPYIYELLADLN------ITQETAYKLIDIVEVAAELL 355
L L + + +T G I L++ + I Q +AY+ + + E
Sbjct: 174 LTLSRLVRAGETTQPTQVWT--GREICGLMSTVGLGPEQMIEQSSAYQKLSASIMDNENY 231
Query: 356 QE------------DKLQNKKS-TTACRIESISNILKIIFRDKGTAHSAYYRVHVREA-- 400
++ ++ Q K + T ++ +L +FRD H + YRV + E
Sbjct: 232 EDWYRNRNRDNSSNNQFQPKPTHRTLHFFNALFTVLNYMFRD-NMCHLSDYRVVLVETMG 290
Query: 401 ------DANAADVLKGKASRTLSW--------------------WCFNPGIAMQEFSRLE 434
+ D K S+ +W WC NP + + + +
Sbjct: 291 YEKQLTKESITDHKKSTESKMDAWISKKHVKPHFVENKQLSLNFWCLNPSVVFSQLASM- 349
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
+IL SGTLSP+DS EL + FPLR+E HVI++ ++ + GP+G L ++Y++
Sbjct: 350 AHCVILMSGTLSPLDSLEAELNVQFPLRLEANHVISNTRLLVTTLSHGPNGTRLCATYQH 409
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
+++ ++ E+G +VN R+VP G+L F PSY L+D+ I W+ LT + +
Sbjct: 410 QNTYTFQDEIGAVVVNACRLVPGGVLCFLPSYSLLDKLIQRWE------LTGLLNHLNMI 463
Query: 555 KKPVVEPRQSSLFPLAIEDYM---------AKLKDTSTS--------------------- 584
K ++EPR S +E++ AKLK S
Sbjct: 464 KHVMIEPRSSVGLDDWLEEFYTSVNQNVPNAKLKSRRKSIGQANNNESPSSTTLNGNSLV 523
Query: 585 ----GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD------- 633
G++ FAVCRGKVSEGLDFAD R V+ G+P+ T+P+V+ KRE+ D
Sbjct: 524 LNQTGSIIFAVCRGKVSEGLDFADSYARLVIAIGIPYPAFTNPQVQQKREFNDALYKSSS 583
Query: 634 -------------LQAQSQGGE-YKETK---------------LSFLSGEDWYNQQASRA 664
LQ+ + E Y +T LSG +WY+ QA RA
Sbjct: 584 PKMACADKHIRSPLQSLNSSMEKYSDTNDDITSSTSNVSSPRPRKVLSGSEWYDAQAYRA 643
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ--ISLWIQPHIQCYSKFGDVVYTLTRF 722
+NQA+GR IRH +D+G+II D RF S + IS WI+ + + + + L F
Sbjct: 644 LNQALGRCIRHANDWGSIILADARFVEQSSRYMCGISRWIRSRVNHHCSWDSLECQLQSF 703
>gi|256053044|ref|XP_002570021.1| brca1 interacting protein C-terminal helicase 1 brip1 [Schistosoma
mansoni]
Length = 725
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 297/660 (45%), Gaps = 132/660 (20%)
Query: 182 PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFD 241
P DIEDLV CPYF +R L ++ DI+F PY+YL+DP R +E + I+I D
Sbjct: 57 PWDIEDLVQALIPIPSCPYFCSRSLARSADIIFCPYDYLLDPLNRSATSLEVTDHIIILD 116
Query: 242 EAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALL 301
EAHN+E +AASF ++ L + + + + S TL ILR +
Sbjct: 117 EAHNIEDASREAASFTITEQQLKSARDDLEGLRIVGFEPEACS---TLIAMVDGILRVMQ 173
Query: 302 LKLEKRIAEVPINSKELGFTKPGPYIYELLADLN------ITQETAYKLIDIVEVAAELL 355
L L + + +T G I L++ + I Q +AY+ + + E
Sbjct: 174 LTLSRLVRAGETTQPTQVWT--GREICGLMSTVGLGPEQMIEQSSAYQKLSASIMDNENY 231
Query: 356 QE------------DKLQNKKS-TTACRIESISNILKIIFRDKGTAHSAYYRVHVREA-- 400
++ ++ Q K + T ++ +L +FRD H + YRV + E
Sbjct: 232 EDWYRNRNRDNSSNNQFQPKPTHRTLHFFNALFTVLNYMFRD-NMCHLSDYRVVLVETMG 290
Query: 401 ------DANAADVLKGKASRTLSW--------------------WCFNPGIAMQEFSRLE 434
+ D K S+ +W WC NP + + + +
Sbjct: 291 YEKQLTKESITDHKKSTESKMDAWISKKHVKPLFVENKQLSLNFWCLNPSVVFSQLASM- 349
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
+IL SGTLSP+DS EL + FPLR+E HVI++ ++ + GP+G L ++Y++
Sbjct: 350 AHCVILMSGTLSPLDSLEAELNVQFPLRLEANHVISNTRLLVTTLSHGPNGTRLCATYQH 409
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
+++ ++ E+G +VN R+VP G+L F PSY L+D+ I W+ LT + +
Sbjct: 410 QNTYTFQDEIGAVVVNACRLVPGGVLCFLPSYSLLDKLIQRWE------LTGLLNHLNMI 463
Query: 555 KKPVVEPRQSSLFPLAIEDYM---------AKLKDTSTS--------------------- 584
K ++EPR S +E++ AKLK S
Sbjct: 464 KHVMIEPRSSVGLDDWLEEFYTSVNQNVPNAKLKSRRKSIGQANNNESPSSTTLNGNSLV 523
Query: 585 ----GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD------- 633
G++ FAVCRGKVSEGLDFAD R V+ G+P+ T+P+V+ KRE+ D
Sbjct: 524 LNQTGSIIFAVCRGKVSEGLDFADSYARLVIAIGIPYPAFTNPQVQQKREFNDALYKSSS 583
Query: 634 -------------LQAQSQGGE-YKETK---------------LSFLSGEDWYNQQASRA 664
LQ+ + E Y +T LSG +WY+ QA RA
Sbjct: 584 PKMACADKHIRSPLQSLNSSMEKYSDTNDDITSSTSNVSSPRPRKVLSGSEWYDAQAYRA 643
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ--ISLWIQPHIQCYSKFGDVVYTLTRF 722
+NQA+GR IRH +D+G+II D RF S + IS WI+ + + + + L F
Sbjct: 644 LNQALGRCIRHANDWGSIILADARFVEQSSRYMCGISRWIRSRVNHHCSWDSLECQLQSF 703
>gi|449018745|dbj|BAM82147.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 1142
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 211/363 (58%), Gaps = 36/363 (9%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT-SKQ 473
TLS+WC PG+A++ + +++LTSGTLSP++S A E+ +FP+R++N HV+ + Q
Sbjct: 610 TLSFWCLWPGLALRRATS-NAHAVLLTSGTLSPLESVASEMGASFPVRLQNSHVVDPATQ 668
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
++AGI+ GP LNSSY NR + EY +LG+ +VNIAR+ P G+L+FFPSY L+ + +
Sbjct: 669 VFAGILTKGPRDIQLNSSYANRHNREYISDLGSALVNIARVSPRGMLVFFPSYVLLARFV 728
Query: 534 ACWKNTS--HGN------------LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
W+ + H N T+W+R+ K+ +EPR + ++ Y +
Sbjct: 729 EIWQTGAFHHNNPLNPAHRGRQPTQATVWDRLNAVKRIFMEPRDADASRQTVDAYRQWI- 787
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
+S A FAVCRG+ EG+DFAD GR V++ G+PF + TDP++ LKR+YL+ QA
Sbjct: 788 -SSGRDACLFAVCRGRTGEGIDFADDFGRTVILVGLPFPSTTDPRIILKRDYLERQALHL 846
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AH----PSR 694
K ++G WY QQ RA NQA+GRVIRH D+GAI+ CDERF AH P
Sbjct: 847 RDHGKT-----ITGRLWYVQQCLRAANQAMGRVIRHAQDFGAILLCDERFRAHLRDLPRW 901
Query: 695 KSQISLWIQP----HIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRELK- 749
S S P +IQ + +FG + L F+ ERI L + E++ V ++
Sbjct: 902 LSAASSDADPRATHNIQVFERFGTFMSNLCGFWHSERI---RQLSAAQLELATSVPPVRT 958
Query: 750 PVD 752
PVD
Sbjct: 959 PVD 961
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 193/388 (49%), Gaps = 72/388 (18%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
T IR + VEFPFE Y CQ+ YME VI++LQ NALLESPTGTGKTL LLCA LAWR
Sbjct: 11 TLFIRQVPVEFPFEPYPCQVRYMEHVIEALQTGQNALLESPTGTGKTLGLLCAALAWRSL 70
Query: 63 L-----GSFST---------------LGSQVNNQISGSQSSV-------------NSSQS 89
L G ST G ++ + G+ +V SS++
Sbjct: 71 LVAQVQGQASTQRISKSLADDSPKNDYGERLLQGVQGAAGAVVAPEASLRGLVPAASSEN 130
Query: 90 GDS-----KLPTILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLR 142
G +P I+Y +RTHSQ++Q ++EL + Y + V+LGSR+ LC+H VS L
Sbjct: 131 GPGPTPLQSVPRIIYLTRTHSQIKQAVRELSRTAYGASVRTVVLGSRQHLCVHPVVSRLE 190
Query: 143 -GSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE------------------PI 183
+ QN C L K+ RRC+ + K +GD+ P
Sbjct: 191 NATMQNVRCTQLTKE---RRCSFYLNAEQKFKE---VGDDFFFIAVDSTSTLALPGRRPR 244
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
D+EDL G CPYF++RE +I+F PYNYL D R+ LG+ + I+I DEA
Sbjct: 245 DLEDLAAYGHQHAMCPYFLSREASAEAEIIFMPYNYLFDGKCRRSLGLSVEGDIIIGDEA 304
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCIDISST-------RRGQSSDETLNPDNFAI 296
HNLE IC D+ SFD ++ C+S + S+ R G +++ L+ +
Sbjct: 305 HNLESICCDSLSFDFTAAERQRCVSAIQQLASALSSGLLNRDGREGSNTEPALHASDLHA 364
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPG 324
L +++ LE+RI+ V + +PG
Sbjct: 365 LLEIMVALEERISLVSQADAKASHARPG 392
>gi|268569974|ref|XP_002640663.1| C. briggsae CBR-DOG-1 protein [Caenorhabditis briggsae]
Length = 869
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 193/659 (29%), Positives = 311/659 (47%), Gaps = 86/659 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIH---REVSLLRG------SA 145
I Y +RTH Q+ QV++E Y K IL SR+Q CI+ R+ + G SA
Sbjct: 229 IYYGTRTHKQIAQVVKEFSRLPYANIIKHTILASRDQSCINPTARKQPDISGYCKEINSA 288
Query: 146 QNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGP--CPYFMT 203
C+F K R S + ++ + G D+E++V P CPYF T
Sbjct: 289 HGIGCQF--KNAMRPRFEKASMLRSHLMDQ---GTMVFDMEEIVETLALAYPQICPYFST 343
Query: 204 -RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
R L + D++F P++YL+DP R V KNS++I DEAHN+E C +AASF +
Sbjct: 344 NRILTQDADLIFCPFSYLVDPLIRNSSDVHVKNSVVILDEAHNIEDTCREAASFTFTEKE 403
Query: 263 LT-ACISEAKNCIDISSTRRGQSSDETLN--PD---NFAILRALLLKLEKRIAEVPINSK 316
L + +S + I + +S++E PD + + L+ LE E+ +
Sbjct: 404 LDDSLLSFRLKRVAIDNITSNKSAEEAFADVPDASIHMKEFKGHLMYLEHLTLEILRWVR 463
Query: 317 ELG--FTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESI 374
+ P E L ++ ET + + E+ +L K + A +I
Sbjct: 464 HVAEEARTPPKSRQEGLKTCTLSSETLFSSLTNAEIGVDLFAPPNTP-KHNAIATSFGAI 522
Query: 375 SNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTL---SWWCFNPGIAMQEF- 430
+ E + D K A+ + W F Q++
Sbjct: 523 TK--------------------QNEPEMKEMDQFKPSATAIVVIEKWLYFQSYFGNQQYR 562
Query: 431 -SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
+ E SIIL SGTL PMD+ EL + F +VE VI+ I+A ++P+GP G +
Sbjct: 563 PTYSETRSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPDNIFAAVLPIGPHGNRIT 622
Query: 490 SSYRNRDSIE--YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC-WKNTSHGNLTT 546
+YRN E + +E+ + + + VP G+L F PSY +++Q C +KN S ++
Sbjct: 623 CTYRNTSDPESPFYEEVASIVKYVCTNVPAGILCFLPSYRVLEQLKMCMYKNQSMLHI-- 680
Query: 547 IWERICKHKKPVV-EPRQSSLFPLAIEDYMAKLKD-----TSTSGAVFFAVCRGKVSEGL 600
K KK ++ EPR+SS ++++ + + + +GA+ FAV RGKVSEG+
Sbjct: 681 ------KSKKVILFEPRRSSELSAVMDEFDEAIFNPTRFGATINGALMFAVFRGKVSEGI 734
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DFAD R V+ G+P+ D +V K+ Y D ++ G L+G++WY Q
Sbjct: 735 DFADDRARVVISVGIPYPNAMDDQVNAKKMYNDQNSKEMG---------ILNGDEWYTTQ 785
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK-------SQISLWIQPHIQCYSKF 712
A RA+NQA+GR +RH++D+GA++ D+R + + +++S WI+ ++ Y F
Sbjct: 786 AYRALNQALGRCLRHKNDWGAMLMIDDRLERQTSQLTTGASSARVSKWIRAQLKSYPSF 844
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 9 IDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
+ V FP Y Q + + +++ +L++ N L ESPTG+GKT+ LL +T AW
Sbjct: 71 VPVRFPKGMSLYPTQKLMIVRILAALKSSQNVLGESPTGSGKTMALLSSTCAW 123
>gi|162462746|ref|NP_001104820.1| FancJ-like protein [Bombyx mori]
gi|161339205|dbj|BAF94023.1| FancJ-like protein [Bombyx mori]
Length = 851
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 196/707 (27%), Positives = 321/707 (45%), Gaps = 106/707 (14%)
Query: 68 TLGSQVNN--QISGSQSSVNSSQS--GDSKLPTILYTSRTHSQLRQVIQELKTSNY--RP 121
+LGS N IS S S ++SQ+ ++P + Y +RTH QL+QVI+E K + Y
Sbjct: 194 SLGSPAENITNISDSPRSPSNSQNPPKHERVPVVYYGTRTHKQLQQVIKEFKRTVYCKEI 253
Query: 122 KMVILGSREQLC-------------------IHREVSLLRGSA-QNNACRFLCKKGTNRR 161
+M IL R++ C I + SL+ S+ Q ++C+F NR
Sbjct: 254 RMSILAGRDRTCLMPFDRKVWKTKDDMCAECIKTKSSLMNASSPQTSSCKFY----DNRM 309
Query: 162 CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
HS + DIEDLV G CPYF + + I+F PYNYLI
Sbjct: 310 SLTHSNLP-----------PAFDIEDLVEAGAKLKACPYFAAKSMAARAKIIFCPYNYLI 358
Query: 222 DPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE---AKNCIDISS 278
+P+ R+ + + ++I++ DE HN+E IC D A+ + ++ + + AK + +
Sbjct: 359 NPFIRERMRINLADNIVVIDEGHNIEDICRDEATCTIERRRISEAVDQLQYAKRYVKMGQ 418
Query: 279 TR--RGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN- 335
RG++ D + I L++ R++ + + E +A LN
Sbjct: 419 DEAARGETIDFFIK--TLQIWDKCLIEQSDRVSRENTDMWNMN---------EFMAMLNE 467
Query: 336 --ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRD--------- 384
I Q + ++ L +D L T +E++ + L +F+D
Sbjct: 468 NGIGQNNYHNFN--FHLSKLLRMQDDLYGVGQHTVALLETMDSALGYLFKDECKHAEDFV 525
Query: 385 ----KGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIIL 440
KG A YR + A++ ++ C +P + + ++ SIIL
Sbjct: 526 PMLLKGDDSRALYRRRSYTGEFKGANI-------SIRLLCMSPAVLFEGLTKAR--SIIL 576
Query: 441 TSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY 500
SGTLSP+ S EL F + N HVI+ +++W G + S L + N + +
Sbjct: 577 ASGTLSPVGSMKHELGAEFNVSCLN-HVISRERVWIGTLRNCESSEQLKCTKDNMEKKQV 635
Query: 501 KQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVE 560
+ +G I+ + + P G+L F SY M W+ T +W+++ K E
Sbjct: 636 QDSIGKAILRVCDVTPHGVLCFHSSYTSMRLLHQRWQQTG------LWDKLNSLKYIFKE 689
Query: 561 PRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
++ +++Y + + GA+ FAV RGKVSEG+DF D RAVV G+PF T+
Sbjct: 690 SDNTTDHDEIMKEYYSAAE--VDRGAILFAVYRGKVSEGMDFRDRQARAVVTIGVPFPTI 747
Query: 621 TDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
D V K +Y D + + + G DWYN QA RA+NQA+GR +RH +D+G
Sbjct: 748 GDRMVTEKMKYNDKHSNGK---------KLMRGWDWYNVQAFRAMNQAIGRCVRHLNDWG 798
Query: 681 AIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFGDVVY---TLTRFF 723
A++ DER A +S W++ + + F ++++ +LTRF
Sbjct: 799 AVLMIDERIAEQRNLEYLSKWVRDFLGNNHFTFDELMHRQNSLTRFM 845
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T I G+ V P Y Q + +VI++++ N LLESPTG+GKTL LLC TLAW
Sbjct: 63 TIMIAGVKVNLPVNPYGTQKALIHQVIKTIKAAQNCLLESPTGSGKTLALLCGTLAW 119
>gi|198429884|ref|XP_002120239.1| PREDICTED: similar to BRIP1 [Ciona intestinalis]
Length = 1145
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 192/314 (61%), Gaps = 24/314 (7%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
L +WC NP +A + + + IILTSGTLSPM SF+ EL L FP+++E HVI++ Q++
Sbjct: 448 LHFWCLNPAVAFTDLA--DTRCIILTSGTLSPMSSFSSELGLAFPIQLEAAHVISNSQVF 505
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
G + GP+G+ L ++Y+N +S++++ ELG + ++ +VP G+L FF SY ++++
Sbjct: 506 VGSLGCGPNGHRLQATYQNTNSLDFQDELGKLVQSVCNVVPYGVLCFFSSYKMLEKLCER 565
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEP--RQSSLFPLAIEDY---MAKLKDTSTSGAVFFA 590
WKNT +W IC+ K+ V EP R + F ++++ +A + + +GA+F A
Sbjct: 566 WKNTG------LWYDICQKKEIVCEPHGRNKADFDGVLQNFYHTVAMVGTSDLTGALFLA 619
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
VCRGK SEGLDFA++ RAV+ G+PF D +V LK+ Y + Q +G
Sbjct: 620 VCRGKASEGLDFANNNARAVITVGIPFPNYRDKQVELKKTYNNFHCQDRG---------L 670
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK--SQISLWIQPHIQC 708
L+G DWY QA RA+NQA+GR IRHR+D+GA+I D+RF RK +S W++ ++
Sbjct: 671 LTGNDWYEIQAFRALNQALGRCIRHRNDWGALIIVDDRFCQNPRKYCKGLSKWVRQKVKS 730
Query: 709 YSKFGDVVYTLTRF 722
Y KF +L F
Sbjct: 731 YDKFKVFEESLANF 744
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 158/288 (54%), Gaps = 19/288 (6%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG- 64
I G+ + FPF+ Y QL M +++ LQ + LLESPTG+GKTL LLC+ LAW++ L
Sbjct: 12 IGGVKIHFPFKPYPSQLSMMSMIVKGLQRSEHCLLESPTGSGKTLSLLCSALAWQQDLAM 71
Query: 65 ---SFSTLGSQVNNQISGSQS-SVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
L Q N + + S+ K+PTI + +RTH Q+ Q+ EL T+ YR
Sbjct: 72 RLQKKEELYEQSNVDCAEEECCSIEQPPKEKEKVPTIWFGTRTHKQIAQITHELATTQYR 131
Query: 121 P-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTN-----RRCNHHSRVADYMKN 174
M IL SRE CIH S + +N C+ L +KG + C + V + +++
Sbjct: 132 HVNMSILSSREHACIHPLNS--QSKTKNEGCKEL-RKGIHPDLPGTHCIFYQNV-NRLRS 187
Query: 175 NPHLGD----EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
+ L + + D+EDLV +G CPY+ RELQKT I+F PYNYLIDP R +
Sbjct: 188 HASLKNCGITQAWDLEDLVKLGTRVKSCPYYAARELQKTASIIFCPYNYLIDPSIRSSMQ 247
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS 278
++ +N I+I DEAHN+E +AASF L + +++ ++ I + S
Sbjct: 248 IDLQNDIVILDEAHNIEDSSREAASFTAVETDLMSTVADLEHLISVES 295
>gi|242050104|ref|XP_002462796.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
gi|241926173|gb|EER99317.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
Length = 1153
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 286/586 (48%), Gaps = 81/586 (13%)
Query: 12 EFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATLAWRK----- 61
EFP++ Y QL +M +VI +L Q + +ALLESPTGTGK+L LLC+ LAW++
Sbjct: 34 EFPYKPYGTQLAFMGRVIATLDRARRQGRSHALLESPTGTGKSLSLLCSALAWQRHYPLR 93
Query: 62 ---------SLGSFSTLGSQVNNQISGSQSSVNSSQSGDSK-LPTILYTSRTHSQLRQVI 111
S F G V + + V ++ K PTI Y +RTH+Q+ QV+
Sbjct: 94 TPPAPAPAPSPDPFLHGGGFVPDDTQPQATPVVPEKAAKKKNAPTIYYATRTHAQISQVV 153
Query: 112 QELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADY 171
+E + ++YR +M IL SR+ C++ + A +N + ++ ++ + H +
Sbjct: 154 REYRKTSYRVRMAILASRKHYCVN-----MFACASDN----IDEQWNAQKLSRHPSL--- 201
Query: 172 MKNNPHLGD--EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL 229
+G E DIEDLV +G+ CPYF + + + +VF PYNYLI P R+ +
Sbjct: 202 -----QIGGCYEVHDIEDLVRVGQKAKGCPYFAAQHMAEAAQLVFCPYNYLISPVVRRAM 256
Query: 230 GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETL 289
++ +SI+I DEAHN+E I DA S D+ L E +N ++DE +
Sbjct: 257 DIDISSSIIILDEAHNIEDIARDAGSIDIDEESLHLLQGELQNL----------ATDEAV 306
Query: 290 NPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIY--ELLADLN----------IT 337
+ L ++ L IAE N F P Y + + +L +
Sbjct: 307 -AMIYQPLHDIIQGLIGWIAEREGNLHNHEFGHPASYWTGEKAMNELQRAGISPMYFPVL 365
Query: 338 QETAYKLIDIVEVAAELLQED--KLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRV 395
QE A K I AA + D L ++ T +ES+ + L F KG Y
Sbjct: 366 QECATKAIK----AASDTESDGSHLSGGRAMT---LESLFSSLSYFFGQKGRNSCDYQLA 418
Query: 396 HVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL 455
R D + + T+S WC NP + QE + + S+ILTSGTLSPM SF EL
Sbjct: 419 LQRFVKKEGNDEISSRC--TMSLWCLNPAVVFQEIADRTL-SVILTSGTLSPMGSFTSEL 475
Query: 456 KLNFPLRVENPHVITS-KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
+ F +E PHVI + Q++A ++ GP+ +LN+SY+ D++ ++ ELG ++ I RI
Sbjct: 476 GVQFEACMEAPHVINADSQVFAAVLSSGPTRQILNASYKTADNLSFQDELGASLEEICRI 535
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVE 560
VP G L+FFPSY L+D+ W T W R+ K V+
Sbjct: 536 VPGGALVFFPSYKLLDKLQVRWSQTGQ------WARLNAQKHVFVD 575
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 622 DPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
D +V+LK+ Y D YK +K LSG +WY QA RA+NQA GR IRH+ DYG
Sbjct: 586 DVQVKLKKRYND--------SYKSSK-HLLSGSEWYCHQAFRALNQAAGRCIRHKSDYGG 636
Query: 682 IIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR--EERI----CGSTNLK 735
II DER+ + IS W++ I+ Y F + + L +FF+ EE+I CG
Sbjct: 637 IILIDERYQEGRNVAYISKWLRNAIKKYDSFQETMAELQKFFQNAEEKIKIKDCGIFPKV 696
Query: 736 LIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAVDQ 771
+ +E + + K K+S E+ SS +V Q
Sbjct: 697 KLDSEAPQSLSDDK-----RKLSWPELSSSNHSVSQ 727
>gi|340379357|ref|XP_003388193.1| PREDICTED: hypothetical protein LOC100635447 [Amphimedon
queenslandica]
Length = 1055
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 201/350 (57%), Gaps = 47/350 (13%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVG-SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
+L +WC NP +A FS L+V SIILTSGTLSPM SF+ EL + FP+++E HV+ Q
Sbjct: 72 SLHFWCLNPAVA---FSELQVAHSIILTSGTLSPMSSFSSELGVIFPIQLEANHVVAQSQ 128
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
W + GPS LN+SY+ D+ E++ E+GN I+ + ++VP G+L F SY L+++
Sbjct: 129 TWVSTLSHGPSSQPLNASYQFADTFEFQDEIGNAILEVCKVVPFGVLCFVSSYKLLEKLT 188
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQS--SLFPLAIEDYMAKLK----------DT 581
+ W++T W +I K K V EPR + + F + + + +++ DT
Sbjct: 189 SRWQDTG------TWFQILKKKHIVCEPRAADKADFEIVMSQFYTRVQTAVERARSGEDT 242
Query: 582 ST---------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYL 632
+ GA+FFAVCRGKVSEGLDFAD+ RAV+ G+PF + D +V LKREY
Sbjct: 243 NVDDEDSESVQDGALFFAVCRGKVSEGLDFADNNARAVITIGIPFPNVKDEQVGLKREYN 302
Query: 633 DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHP 692
+ + +G LSG +WY QA RA+NQA+GR IRH+ D+GA+I DERF+
Sbjct: 303 NSHSYHRG---------LLSGSEWYEIQAYRALNQALGRCIRHKKDWGALILIDERFSKS 353
Query: 693 SRKSQ-ISLWIQPHIQCYSKFGDVVYTLTRFFR------EERICGSTNLK 735
+R + +S W++ + +S F D + +L F EE + LK
Sbjct: 354 ARYVKGLSKWVRQRVGHHSVFTDAMSSLNEFVSMHLQKDEEEVLSQIELK 403
>gi|402594364|gb|EJW88290.1| hypothetical protein WUBG_00802 [Wuchereria bancrofti]
Length = 961
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 213/741 (28%), Positives = 330/741 (44%), Gaps = 139/741 (18%)
Query: 87 SQSGDSKLP--TILYTSRTHSQLRQVIQELKTSNYRP----KMVILGSREQLCIHREVSL 140
++ G + LP TI Y +RTH Q+ QV++E Y K IL SRE +CI+ + +
Sbjct: 228 AEEGHTCLPRVTIYYGTRTHKQISQVVKEFSRLPYGKDGVMKHTILASREHMCINPAIRV 287
Query: 141 LRGSAQNNACR-FLCKKGTNRRCNHH----------SRVADYMKNNPHLGDEPIDIEDLV 189
N+ C+ F+ G C++ S + + + D+EDLV
Sbjct: 288 --NDDINSKCKEFISSDGIG--CSYKNSMRGKYERPSAIRRLIAQTTQKVNYVWDVEDLV 343
Query: 190 NIGRTFGP--CPYFMT-RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHN- 245
+ P CPYF T R L DI+F P++YLIDP R G+ KN+I+I DEAHN
Sbjct: 344 EALKCSTPSLCPYFSTARVLIDDADIIFCPFSYLIDPIIRTNSGLSLKNTIVILDEAHNV 403
Query: 246 ----------------LEGICAD----AASFDLSSGLLTACISEAKNCIDISSTRRGQSS 285
L G AD A + + A I + I+ R G+
Sbjct: 404 EDVCREAVSFTFMERELVGAAADLYEKATELEKELAKVDAKIVAEEGLIETQGNRAGRYK 463
Query: 286 DETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLA--DLNITQET--- 340
+ +L+ L P+ + L +T ++ DLNI +T
Sbjct: 464 E------CLEMLKGHFKTL------APMKNDRLTYTFNWEKLFTTFESNDLNIFDKTGKG 511
Query: 341 -AYK--LIDIVEVAAELLQEDKLQN------KKSTTACRIESISNILKIIFRDKG-TAHS 390
AY L + + + D+ Q+ ++TA +E K FRD T++
Sbjct: 512 TAYSGLLEAFISITGTGNENDEFQSYLKHYKPSASTAICVEKFLYFFKSYFRDDNRTSYK 571
Query: 391 AYYRVH-------------VREADANAADVLKGKA----------SRT------------ 415
+ + + +N+ D+L + SRT
Sbjct: 572 LFVCIDKPFVPYAQSNIFDIANNSSNSVDILDMSSYDKEKEVWLDSRTRLKGYREVKYGY 631
Query: 416 ---LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
+S+WC P +A + + S+IL SGTLSP D+F EL F +E +I +
Sbjct: 632 RVAISFWCMRPSVAYLDAFK-GCRSVILASGTLSPTDTFRTELGTTFQQEMEGNQIIPDE 690
Query: 473 QIWAGIVPVGPSGYLLNSSYR--NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
QI+A ++P GPSG L +YR NRD + +E+ + ++ +I+P G+L FF SY ++D
Sbjct: 691 QIFAAVIPSGPSGEKLCGTYRIINRDD-RFIREISLILSHVCKIIPKGVLCFFSSYRVLD 749
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT-----STSG 585
+ T I +I K + EPR+SSL + Y + ++ +G
Sbjct: 750 HIY------EYMETTGILRQIQNIKLVLKEPRRSSLMNSVMMQYERAIVNSLDIGPQCTG 803
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKE 645
A+ AV RGKVSEG+DF D R V+ G+PF D +V K++Y D
Sbjct: 804 ALLMAVFRGKVSEGIDFTDDRARCVMTVGIPFPNAMDEQVIEKKKYNDDYC--------- 854
Query: 646 TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF----AHPSRKSQISLW 701
TKL LSG++WY QA RA+NQA+GR +RHR D+G+I+ DER +P+ K ++S W
Sbjct: 855 TKLQILSGDEWYTMQAYRALNQALGRCLRHRSDWGSILMLDERLLQTRTNPNAK-KVSRW 913
Query: 702 IQPHIQCYSKFGDVVYTLTRF 722
I+ ++ + + + L F
Sbjct: 914 IRKQLRPLTNYEHFLSELANF 934
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 6 IRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
I G ++ P + Y Q + K++ SL+NK NAL+ESPTG+GKTL LL A+ W L
Sbjct: 64 ICGYIIKLPPNIQPYATQRTMIAKILISLKNKLNALIESPTGSGKTLGLLSASCGW---L 120
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM 123
+ +Q ++ + + SG+ L S L + ++ S+ K
Sbjct: 121 ERYKKERTQSRDECKACHNGSGNGHSGNKTLD--------QSTLLGELNDVDLSDNNSKR 172
Query: 124 VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI 183
+ S E C + S L +N+ C S V++ ++ L D +
Sbjct: 173 MNTISAECSCDTQSFSTLEDEFENDFCAVA----------SSSVVSNKLEGVTLLDDSKL 222
Query: 184 DIEDLVNIGRTFGP--CPYFMTRELQKTVDIV 213
++D+ G T P Y+ TR ++ +V
Sbjct: 223 SMKDVAEEGHTCLPRVTIYYGTRTHKQISQVV 254
>gi|148683832|gb|EDL15779.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a [Mus
musculus]
Length = 901
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 192/662 (29%), Positives = 312/662 (47%), Gaps = 106/662 (16%)
Query: 123 MVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP--HLG- 179
M IL SR+ C+H EV + + C L + C + V HL
Sbjct: 1 MTILSSRDHSCVHPEV--VGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQG 58
Query: 180 -DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSIL 238
DIE+LV++GR CPY+ REL + DIVF PYNYL+D R+ + ++ K ++
Sbjct: 59 MSRAWDIEELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVV 118
Query: 239 IFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILR 298
I DEAHN+E ++AS+ ++ L E + I+ G ++ P LR
Sbjct: 119 ILDEAHNIEDCARESASYSVTEVQLRFARDELDSLIN------GNIRKKSHEP-----LR 167
Query: 299 ALLLKLEKRIAEVPINSKEL---GFTK-----PGPYIYELLADLNITQETAYKLIDIVEV 350
+ L I + NSK L G+ G + L + IT TA + +
Sbjct: 168 DVCYNL---INWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT--TATFPVLQRHL 222
Query: 351 AAELLQEDK---LQNKK---------STTACRIESISNILKIIFRDKGTAHSAYYRVHVR 398
+A L +E+K + K+ ++T ++ + +L +FR+ ++ S +
Sbjct: 223 SAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSSSISIVFPFRF- 281
Query: 399 EADANAADVLKGKASRTLSWW----CFNPGIAM-----QEFSRLEVGSIILTSGTLSPMD 449
AD K +T SW F+ + ++ SR ++G L L+P
Sbjct: 282 ------ADDYKVAIQQTYSWTNQIAIFDKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAV 335
Query: 450 SFAQ-----------------------ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
+F+ EL + F +++E HVI++ Q+W G V GP G
Sbjct: 336 AFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVWVGTVGSGPKGR 395
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
L +++++ ++ E++ E+G ++++ + V G+L F PSY L+++ W T
Sbjct: 396 NLCATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWI------FTG 449
Query: 547 IWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W + K + EP+ + + F ++ Y +K VCRGKVSEGLDF+D
Sbjct: 450 LWHSLESVKTVIAEPQGGEKTDFDELLQVYYDAIKFKGEK------VCRGKVSEGLDFSD 503
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
RAV+ G+PF + D +V LKR+Y D ++S+G L G WY QA RA
Sbjct: 504 DNARAVITVGIPFPNVKDLQVELKRQYNDHHSKSRG---------LLPGRQWYEIQAYRA 554
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRF 722
+NQA+GR IRH++D+GA+I D+RF +P+R S +S W++ IQ +S F + +LT F
Sbjct: 555 LNQALGRCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEF 614
Query: 723 FR 724
R
Sbjct: 615 SR 616
>gi|387594391|gb|EIJ89415.1| hypothetical protein NEQG_00185 [Nematocida parisii ERTm3]
gi|387596770|gb|EIJ94391.1| hypothetical protein NEPG_01059 [Nematocida parisii ERTm1]
Length = 689
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 206/727 (28%), Positives = 329/727 (45%), Gaps = 126/727 (17%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + I+G + +E Y+ Q + ++ L+ + ++ESPTGTGKTL +L + +AW
Sbjct: 1 MYSENIKGYTITTKYELYEPQRQSIRTILNCLEEGVSGMIESPTGTGKTLSILESVVAW- 59
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+N ++ +K + T+RT Q +Q+I+ KT +
Sbjct: 60 -----------------------INKNKQ--NKEVKVYVTTRTIKQAQQLIEYFKTIRHA 94
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKK-GTNRRCNHHS-----RVADYMKN 174
PKM +L SR LC++ EV ++AC+ K + +C ++S R + +
Sbjct: 95 PKMSLLASRAHLCLNPEVR--TAGNLDSACKNKNKDINSKNKCKYYSIDKESRTSSMENS 152
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
P + IEDL+ G CPY+ T+++Q IVFAPYNY+I+ K +G++
Sbjct: 153 LPTV----FSIEDLIQSGSECSTCPYYYTKDMQDKSTIVFAPYNYIINKSIVKAMGIDLN 208
Query: 235 NSILIFDEAHNLEGICADAASFDLS----SGLLTACISEAKN----------CIDISSTR 280
SI+I DEAHNL+ IC + S D+ G+LT +E N CI I
Sbjct: 209 GSIIIVDEAHNLDDICRSSGSVDIERIILDGILTKLTTETVNASIEVPEVFTCISIIKGI 268
Query: 281 RGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQET 340
R + F + LL ++ + + +N K+ + P I L+ L IT E+
Sbjct: 269 R----------EYFDGVPDLLSEVPQDMKIYDVNGKQ-ELSIPQKCILSELSKLGITPES 317
Query: 341 AYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA 400
K+ + L++ L ++E+ + K+I D Y + + E
Sbjct: 318 VDKVFSDIN---GLIRNSVLDEFMERWLVQLET---VFKLILSD---GKQRDYGMVISE- 367
Query: 401 DANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN-- 458
D + +L+ F+P M S+IL SGTL P EL N
Sbjct: 368 DKVSFILLRAAVQ-------FDPIYKMAR-------SVILLSGTLQPFPELVNELTYNSG 413
Query: 459 -FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP- 516
F + HVI+ Q++ V +G+ L +Y+ + Y Q + I +IA +
Sbjct: 414 SFKYFLSAGHVISDSQLYTRTVG-QYNGHTLTGTYKETKNPVYFQTISRVITDIAHSLER 472
Query: 517 -DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
G+L F P+Y NT +T + ++ K E + +F ED +
Sbjct: 473 VGGVLCFVPNY-----------NT----ITLLKSKLEKQLLLYTESTDNGIF----EDNL 513
Query: 576 AKLKDTSTSG-AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
K + +G VF V RGK SEG++F DH RAVV+ G+P+ + + + LK++Y
Sbjct: 514 RKYRSKCLNGKCVFLCVFRGKASEGINFKDHESRAVVLVGIPYPNIRNHGIILKKQY--- 570
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
Q G SG WY+QQA RAVNQA+GR IRH++D+G+I D R+ +
Sbjct: 571 NNQYMNG----------SGSKWYDQQAFRAVNQALGRCIRHKNDWGSIFMIDSRYGSAVK 620
Query: 695 KSQISLW 701
S+IS W
Sbjct: 621 SSKISEW 627
>gi|147865346|emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
Length = 1261
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 177/576 (30%), Positives = 270/576 (46%), Gaps = 78/576 (13%)
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
E DIEDLV +G+ C Y+ R++ +VF PY+Y+I+P R + ++ + +ILI
Sbjct: 163 EAHDIEDLVKVGQVVKGCAYYAARDMADNAQLVFCPYSYIINPVIRGAMELDIEGAILIL 222
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHN+E + DA S D+ +L T GQ L P + I + L
Sbjct: 223 DEAHNIEDMARDAGSVDVEEDVLHKL-----------QTELGQ-----LCPADAMIYQPL 266
Query: 301 LLKLEKRIAEVPINSKELGFTK----------PGPYIYELLADLNITQETAYKLIDIVEV 350
+ I+ I+ K+ K G L + NI+Q++ L +
Sbjct: 267 YEMTQDIISW--IDRKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARK 324
Query: 351 A--AELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVL 408
A A + E ++ + + +E + + L F + G H+ Y++ ++ A +
Sbjct: 325 AIKAAIDIESRVAHLSGMSVITLEGLYSALSYFFSENGL-HTVDYQLALQRYVKKDAGSV 383
Query: 409 KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHV 468
G + T S WC NP + + + L + S+ILTSGTLSPM SF+ EL + F +E PHV
Sbjct: 384 AGSWTCTFSLWCLNPAVVFRGIADLSL-SVILTSGTLSPMHSFSSELGVQFGTCLEAPHV 442
Query: 469 I-TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
I Q+WA I P Y LN+SY+ D+ ++ LG ++ I +IVP G L+FFPSY
Sbjct: 443 IDIESQLWAAIFSTSPGNYPLNASYKTADAYAFQDALGKSLEEIFKIVPGGTLVFFPSYK 502
Query: 528 LMDQCIACWKNTSHGN---------LTTIWERICKHKKPVV-EPRQSSLFPLAIEDYMAK 577
LM++ + W+ T L +E + + KP + R++ L+ D
Sbjct: 503 LMEKLCSRWRETEPRGGSQDDFEPILKAYYESVRRGTKPTLGRKRRTKKMDLSQSDEKES 562
Query: 578 LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI------TGMPFATMT----DPKVRL 627
++ GA F AV RGKVSEG+DF+D RAVV + + F + D +V
Sbjct: 563 QDNSKKKGAAFLAVFRGKVSEGIDFSDENARAVVSFLPSLKSNIHFNISSVNSHDIQVAQ 622
Query: 628 KREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDE 687
K++Y D+ YK +K LSG +WY QA RA+NQA DE
Sbjct: 623 KKKYNDM--------YKSSK-DLLSGNEWYCHQAFRALNQAA----------------DE 657
Query: 688 RFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
RF + IS W++ I+ Y F + L FF
Sbjct: 658 RFREDRNTAYISKWLRKSIKQYESFDMSLERLKSFF 693
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATLA 58
Y I GI VEFP++ Y QL +M +VI +L C+ALLESPTGTGK+L LLC+ LA
Sbjct: 14 YHIGGIAVEFPYQPYGSQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSALA 73
Query: 59 WRKS 62
W+K+
Sbjct: 74 WQKN 77
>gi|378756742|gb|EHY66766.1| hypothetical protein NERG_00406 [Nematocida sp. 1 ERTm2]
Length = 690
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 212/724 (29%), Positives = 323/724 (44%), Gaps = 118/724 (16%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M + I+ + +E Y+ Q +E ++ L N + ++ESPTGTGKTL +L A +AW
Sbjct: 1 MHSETIKNYTINTEYELYEPQRKSIETILTCLDNGESGMIESPTGTGKTLSILEAVVAW- 59
Query: 61 KSLGSFSTLGSQVNN---QISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS 117
VN ++ G Q I T+RT Q Q+I LK
Sbjct: 60 ------------VNKNPEKLEGGQ---------------IYVTTRTIKQASQLIAHLKKM 92
Query: 118 NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNR-RCNHHSRVADYMKNNP 176
P M +L SR LC++ EVS + + ++AC+ K RC ++ + +
Sbjct: 93 KNAPMMNLLASRRHLCLNSEVS--KSNDIDSACKKKNKDPNKDSRCKYYRTPNEKEQERD 150
Query: 177 HLGDEP--IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
P IEDLV+ G CP++ TRE Q+ I+F+PYNY++ L ++
Sbjct: 151 RNISLPGVFSIEDLVSAGGECNSCPFYYTRERQEKATIIFSPYNYIVSERISAALKIDLT 210
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNP--D 292
S+LI DEAHN++ +C S D+ L + IS T G S E N +
Sbjct: 211 GSVLIVDEAHNIDDVCRSTGSVDIKRADLASLISRL-------GTGSGMESPEVANSMME 263
Query: 293 NFAILRALLLKLEKRI--------AEVPINS-KELGFTKPGPYIYELLADLNITQETAYK 343
++ ++ LE+ + INS + + P + L + I++ T
Sbjct: 264 TGKFVKKIMNYLEETTDVLNKLDPGQCVINSDNQREISIPSKEMISTLEKMGISKLT--- 320
Query: 344 LIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADAN 403
ID + ELL +D + + I I ++LK I D + V +D
Sbjct: 321 -IDDTFSSIELLFKDMIPDDYFFQW--ITQIKDVLKYIMNDGENKYGM-----VVSSDKI 372
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL---KLNFP 460
+ +L A FNP + E +R S+IL SGTL P EL K +F
Sbjct: 373 SFLLLHAAA-------IFNP---IYEKAR----SVILLSGTLEPFQELVTELTTKKNSFK 418
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD--G 518
+ H+I+ Q++ V S +L +Y+ +Y L ++IV+IA + G
Sbjct: 419 HFLSADHIISQSQLYTAEVSQYNSVPIL-GTYQGSKHPDYISTLVSSIVDIAHSLEKVGG 477
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWER-ICKHKKPVVEPRQSSLFPLAIEDYMAK 577
+L F PSY N+ T+ ER + KH K VE + +S F +E Y
Sbjct: 478 VLCFVPSY----------------NMLTLLERKLEKHVKLFVENKSNSKFEYELEQYRRY 521
Query: 578 LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
K +F V RGK SEG++F DH RAV++ G+P+ + + V LK++Y D
Sbjct: 522 CK---MGKCIFLCVFRGKASEGINFRDHESRAVILVGIPYPNIRNHSVILKKQYNDRYLN 578
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
S +G WY QQA RAVNQA+GR IRH++D+G+I D R+ R +
Sbjct: 579 S-------------TGSKWYEQQAFRAVNQALGRCIRHKNDWGSIFMLDSRYRSAVRSLK 625
Query: 698 ISLW 701
IS W
Sbjct: 626 ISKW 629
>gi|164657658|ref|XP_001729955.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
gi|159103849|gb|EDP42741.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
Length = 891
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 187/705 (26%), Positives = 317/705 (44%), Gaps = 86/705 (12%)
Query: 77 ISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY----RP-KMVILGSREQ 131
+G Q + ++ P I Y SRTHSQL Q+I E+K + + P + + LGSR+
Sbjct: 216 FAGRQCGGMAPENTPETRPKIFYASRTHSQLAQLINEVKRTPFGKAREPVRSISLGSRKH 275
Query: 132 LCIH---REVSLLRGS-AQNNACRFLCKKGTNRRCNH---HSRVADYMKNN--PHLGDEP 182
+C+H R V G+ A N C L + +RC H + + H +
Sbjct: 276 MCLHADVRRVGATSGTDAMNERCLELIQNKKGQRCPFLPPHDAMGQVTMDRYRDHALAQV 335
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
DIE+LV +G+ CPYF TR + ++V PYN L+ R+ L + + SIL+ DE
Sbjct: 336 HDIEELVQLGKDLRICPYFGTRHSARNAELVTLPYNLLLQHDAREALQLSLEESILLIDE 395
Query: 243 AHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLL 302
AHNL D ++ L A I EA +D+ +R + +N ++ IL+ +L
Sbjct: 396 AHNL----IDTILATYTTELTQAHIDEATAQVDVY-LQRFSKRLKGVNEEHIRILQVILH 450
Query: 303 KLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN 362
++ AE+ N + + + +A L + + I++V + L
Sbjct: 451 AMQSFCAEICKNKQHMWQRDTSLTLPAFMAHLGGSVDQ----INLVRLERWL-------- 498
Query: 363 KKSTTACRIESISNILKIIFRDKGTAHSAYYR-----------VHVREA----------- 400
K + A +I +N K+ R + + + + +R +H EA
Sbjct: 499 KDTRIARKIGGYAN--KVWERAQTSENPSTWRPATRPSCMTRAMHSLEAFLLALCNRSMN 556
Query: 401 ----DANAADVLKGKASRT-------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMD 449
+N + G+ + + +PG A + + +I+LT GT+ P+
Sbjct: 557 GCILVSNERAISGGRGTDNTVSGGVRFKYLLLHPGDAFEPLV-ADARAIVLTGGTMEPIS 615
Query: 450 SFAQELKLNFPLR----VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELG 505
F +L N P H++ + +VPVGP G+ L ++ ELG
Sbjct: 616 DFRTQLFSNLPDERLSLFSCGHIVPRDHVLGAVVPVGPKGHTLEFTHEAWQRPCLLDELG 675
Query: 506 NTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS 565
N + N + IVP G+++FFPSY +D +A W+ T + +R+ K K+ +EP+ +
Sbjct: 676 NVLSNYSNIVPHGMVVFFPSYASLDMTVAQWRKTG------MLDRLSKRKQVFMEPKDAK 729
Query: 566 LFPLAIEDYMAKLKD---TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
+ Y + + TS GA+ AV K+SEG++F D R VV+ G+PF
Sbjct: 730 DVDTILRQYASTVSTPPPTSPKGAMLLAVVGAKLSEGINFQDELARCVVMVGLPFPHSQS 789
Query: 623 PKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
P E + A ++ + +T+ S G D Y RAVNQ++GR IRH DY
Sbjct: 790 P------ELAERLAFARSTQPPDTRSSTDPGRDLYVNMCMRAVNQSMGRAIRHSADYAVF 843
Query: 683 IFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+ D+R+ S ++ WI+ +Q + +FG + + +FF++ +
Sbjct: 844 LMLDQRYGRDSILMRLPGWIRTQVQVHERFGSSIKAVAQFFQQRK 888
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 13 FPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ AY QL M + +++ + ESPTGTGKTL LLC+ L W
Sbjct: 31 FPYPTAYRIQLDLMSALFDTIEQGKAGVFESPTGTGKTLSLLCSALTW 78
>gi|302802273|ref|XP_002982892.1| hypothetical protein SELMODRAFT_116951 [Selaginella moellendorffii]
gi|300149482|gb|EFJ16137.1| hypothetical protein SELMODRAFT_116951 [Selaginella moellendorffii]
Length = 852
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 202/692 (29%), Positives = 322/692 (46%), Gaps = 90/692 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I + SRTHSQL Q I+ELK +++ K V LGSR+ LC++++V L GSA N+ C
Sbjct: 183 IFFCSRTHSQLSQFIRELKRTSFSTSLKTVALGSRKTLCVNQDV-LKLGSASRINDRCLD 241
Query: 153 L-----------CKKGTNRRCNHHS--RVAD------------YMKNNPH--------LG 179
L + + +HH+ +V D ++K +
Sbjct: 242 LQKKKKSSSQKVSTRNSPSFVSHHNFFQVDDQRMIKSKTSACPFLKKQRQRKQFKEAVVA 301
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
+P+DIEDLV++G+ G CPY+ +R +V PY L+ R+ LG+ K+S++I
Sbjct: 302 SQPMDIEDLVHLGQKLGSCPYYGSRNSLPMAQVVVLPYQSLLHAATRESLGINLKDSVVI 361
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
FDEAHNL + S LS+ L S+ + TR L P N ++
Sbjct: 362 FDEAHNLVDTVTNTYSSQLSTLQLRQVSSQLSEYLSRFRTR--------LAPANRRYIQT 413
Query: 300 LLL---KLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKL-IDIVEV--AAE 353
LL+ L +R+ V KE PG + A + + + L ID + +
Sbjct: 414 LLVLVQALLERLMSVGSREKE-----PGVQDVQTPAAITTINDFVFSLGIDNINLFKLCR 468
Query: 354 LLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKAS 413
++E + NK S + S N L G A + V + A ++ VL ++S
Sbjct: 469 YIKESNIVNKVSGYGDKYLSQQNEL-TPSSTAGFHPLAAFLVSLTTAQSDGR-VLIVESS 526
Query: 414 RTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITS 471
+ F A + FS + + ++IL GTL P+ L P E+ H +
Sbjct: 527 DGECMFKFLMLDAAKHFSEVVQQARTVILAGGTLQPVAELRDRLLFQVP--DESLHFFSC 584
Query: 472 KQIWAG--IVPV----GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
I G I+P+ GPSG + +Y++R S + +ELG ++NI+ IVP+G+++FFPS
Sbjct: 585 GHIVPGESILPLAIAKGPSGKTFDFTYQSRSSPQMIEELGRLLINISVIVPEGIVVFFPS 644
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSG 585
+ Q CW + I I K K EPR +S +++Y + T+ G
Sbjct: 645 FEYESQVHKCWDKSG------ILSSILKKKNIFREPRNASAVEAVLQEYKTSI--TTGGG 696
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD-------LQAQS 638
A+ +V GK+SEG++F+D GR VV+ G+P+ + DP++ K +Y+D + S
Sbjct: 697 ALLLSVVGGKMSEGINFSDGMGRCVVMVGLPYPSSRDPELLEKIKYIDELNNTKNRKESS 756
Query: 639 QGGEYKETKLSFLS----GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
+ T + G D+Y +AVNQ++GR IRH DY AI+ D R+
Sbjct: 757 SPPSQQRTGFTLQQCGHRGRDYYENLCIKAVNQSIGRAIRHAKDYAAILLLDGRYVTTGG 816
Query: 695 -KSQISLWIQPH-IQCYSKFGDVVYTLTRFFR 724
+++ WI+ H + FG+ L RFF+
Sbjct: 817 PAAKLPEWIKEHLVVVRGGFGEAHRLLHRFFK 848
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLG 70
FPF+ Y QL M V +L+ A++ESPTGTGKTL L+C+ L W + GS S+ G
Sbjct: 9 FPFQPYAIQLQLMRAVYGALEKGGVAIVESPTGTGKTLSLICSVLQWLEDRGSDSSRG 66
>gi|336369679|gb|EGN98020.1| hypothetical protein SERLA73DRAFT_56211 [Serpula lacrymans var.
lacrymans S7.3]
Length = 859
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 193/685 (28%), Positives = 309/685 (45%), Gaps = 83/685 (12%)
Query: 97 ILYTSRTHSQLRQVIQELK---------------------TSNYRPKMVILGSREQLCIH 135
I Y SRTHSQL Q++ EL+ Y+ + V LGSR+QLCI+
Sbjct: 203 IYYASRTHSQLSQILPELRKLKFKHSSNDDDDENDSQQDDQKYYKWRTVSLGSRKQLCIN 262
Query: 136 REVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE----PIDIEDLVNI 191
V L G + CR L ++ ++RC H D ++ L D+ P DIEDL
Sbjct: 263 DAVKLKHGDL-DERCRKLREEKADKRCEHLPGAEDELRM-LELRDQILATPKDIEDLAAA 320
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
GR CPY+ +R ++V PYN L+ R+ LG++ + I++ DEAHNL
Sbjct: 321 GRNALTCPYYGSRRAIPQAELVTLPYNLLLQRPAREALGIDLTDQIVVIDEAHNLIPTLL 380
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
+S L+ L+ + + + R S+ L+ L L ++K IAE
Sbjct: 381 ALSSTRLTRRTLSTSLHQL--SVYFQKFRNRLSAGHVLH---LKRLITFLEAVQKHIAE- 434
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKL--IDIVEVAAELLQEDKLQNK------ 363
S + G K + E++ Q K+ I+++E+ L+ K+ K
Sbjct: 435 -WKSSKDGVQKLSDKV-EVMTPQEFVQRLGRKVDGINLLEIET-YLRNSKVARKISGYCE 491
Query: 364 -------KSTTACRIESISNILKII-FRDKGTAHSAYYRVH---VREADANAADVLKGKA 412
S+ I + + +L + F + A S R+ ++ +D + +V
Sbjct: 492 KYLSIVADSSAGDHIAAAAPLLVVEGFMQRLAAASEDGRIILSIIKTSDGDDVEV----- 546
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP----HV 468
+ NP ++ + + ++L GT+SP+ +L FP + H+
Sbjct: 547 ----KYQLLNPSTIFRDVADVS-RCVVLAGGTMSPIQDVVNQLFAYFPTEKLSTFSCGHI 601
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I + I A +V GP G L +YR + + ELG I N+ IVP GL++FFPSY
Sbjct: 602 IPASNIQALVVGKGPRGGDLEFNYRGQSDKQMIAELGQIIFNLCSIVPGGLVVFFPSYSY 661
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST----- 583
++ W +T + E+ KK +EP SS + +Y + + ++
Sbjct: 662 LNVVKEEWGSTR------MLEKFEGKKKVFMEPPDSSEVEAVLREYAVEARSSNVRPRGR 715
Query: 584 -SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGE 642
+GAV FAV K+SEGL+F+D RAVVI G+PFA T P +R + +Y + +G
Sbjct: 716 RAGAVLFAVIGAKLSEGLNFSDELARAVVIVGLPFANKTSPDLRERMKYANEMEARRG-- 773
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
K + + Y AVNQ++GR IRHR D+ ++I D R+ + ++++ WI
Sbjct: 774 VKRNHGEKDAASELYENMCMNAVNQSIGRAIRHRSDWASLILVDRRYRSSAIQAKLPRWI 833
Query: 703 QPHIQCYSKFGDVVYTLTRFFREER 727
I FG V L FFR++R
Sbjct: 834 ASGIMATETFGQTVKQLGTFFRDKR 858
Score = 43.1 bits (100), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKT 49
FP+ Y Q+ M+ V S++N+ A++ESPTGTGKT
Sbjct: 19 FPYNPYPIQIDLMQHVYSSIENRQVAIVESPTGTGKT 55
>gi|260830571|ref|XP_002610234.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
gi|229295598|gb|EEN66244.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
Length = 763
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 209/779 (26%), Positives = 361/779 (46%), Gaps = 119/779 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ +SL K + +LE P+GTGKT+ LL +A+ K+
Sbjct: 5 IDGLLVLFPYDYIYPEQYSYMVELKRSLDAKGHCVLEMPSGTGKTVSLLSLIVAYLKT-- 62
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL--------KT 116
+ ++Y SRT ++ +V++EL K
Sbjct: 63 -------------------------SPKDVCKLIYCSRTVPEIEKVLEELRKLMEYYEKE 97
Query: 117 SNYRPKMV--ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSR-----V 168
+ P ++ L SR+ LCIH EVS L+ G + C + R H R V
Sbjct: 98 TGEPPNLIGLALSSRKNLCIHPEVSTLQFGKEVDGRCHQMTASFVRSR---HERDPDVPV 154
Query: 169 ADYMKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
D+ + LG E + +++D+ ++GR G CPYFM R +IV Y+YL+D
Sbjct: 155 CDFYERFDALGRETLLPPGIYNLDDMKDVGREKGYCPYFMARYAITYANIVVYSYHYLLD 214
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + E KNS+++FDEAHN++ +C D+ S ++ +L C + + + +R
Sbjct: 215 PKIADLVSKELAKNSVVVFDEAHNIDNVCIDSMSVTINRRMLDRCQTNVEALT--RTVQR 272
Query: 282 GQSSD------------ETLNPDNFA-----ILRALLLKLEKRIAEVPINSKE----LGF 320
+ +D E L N A +L +L E VP N + +GF
Sbjct: 273 LKDTDQQRLRQEYSRLVEGLREANVARETDVVLSNPVLPDEVLQEAVPGNIRTAEHFVGF 332
Query: 321 TKPG-PYIYELLADLNITQET-AYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNIL 378
K Y+ L ++ QET A L D+ E + + +++ + R I+++
Sbjct: 333 MKRFLEYLKSRLRIQHVVQETPASFLKDLKEKVCLDRKPLRFCSERLNSLIRTLEIADLT 392
Query: 379 K----IIFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-F 430
I+ + T S Y + + + D + ++ L++ C + IA++ F
Sbjct: 393 DFSPLILLANFATLVSTYMKGFTLIMEPFDDRTPTI----SNPILNFSCMDASIAIKPVF 448
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ-IWAGIVPVGPSGYLLN 489
R + S+++TSGTLSP+D + + L P+ + + + ++ I IV G +
Sbjct: 449 DRFQ--SVVITSGTLSPLDMYPKILDFR-PVNMASFTMTLARPCICPMIVGRGNDQVTMT 505
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
S + +R+ + + GN +V+++ +VPDG++ FF SY M+ +A W I E
Sbjct: 506 SKFESREDVAIIRNYGNLLVDMSAVVPDGIVAFFTSYSYMESTVAAWYEQG------IIE 559
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
+ ++K +E + ++ +A++ Y ++ GA+ +V RGKVSEG+DF H GRA
Sbjct: 560 NVQRNKLLFIETQSAAETSVALQKYQEACENGR--GAILLSVARGKVSEGIDFEHHLGRA 617
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
VV+ G+P+ ++ + EYL Q Q + D+ A R Q V
Sbjct: 618 VVMFGIPYVYTQSRILKARLEYLRDQFQ-------------IRENDFLTFDAMRHAAQCV 664
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI---QCYSKFGDVVYTLTRFFRE 725
GRV+R + DYG ++F D+RFA ++ ++ WIQ ++ C + V +F R+
Sbjct: 665 GRVLRGKTDYGVMVFADKRFARSDKRGKLPKWIQEYLSDGMCNLTTDEAVQVSKKFLRQ 723
>gi|328853665|gb|EGG02802.1| hypothetical protein MELLADRAFT_38383 [Melampsora larici-populina
98AG31]
Length = 791
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 192/699 (27%), Positives = 331/699 (47%), Gaps = 94/699 (13%)
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLP-TILYTSRTHSQLRQVIQELKTSNYR--PK 122
+T+ Q + + + G + LP +I +TSRTHSQL Q + EL+ +++ +
Sbjct: 135 IATISDQSDEEFAPEDDEGQEDTIGPNGLPRSIYFTSRTHSQLSQFVSELRKTSFGLGTR 194
Query: 123 MVILGSREQLCIHREVSLLRGS--AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLG- 179
++ LGSR LC++ EV S A N AC L +KG + N+ +L
Sbjct: 195 LIALGSRSNLCVNEEVKKKAKSLEALNEACTDL-QKGV-------------LPNDLNLSY 240
Query: 180 ---DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
E DIE+L ++G+ G CPY+ R+ + IV PYN L+ R LG+ ++
Sbjct: 241 ARQSEVRDIEELASLGKERGVCPYYGARKALRQAQIVTLPYNLLLQKSSRNALGISLTDN 300
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
++I DEAHNL S +SS L KN I + ++ L N
Sbjct: 301 VIIVDEAHNLIDNVLAIHSTSISSNFLEL----VKNSFKIYIKK----FEKKLKGSNLVH 352
Query: 297 LRALLLKLEKRIAEVPIN-SKELGFTKP---GPYIYELLADLNITQETAYKLIDIVEV-- 350
L+ L+ R+ E N EL P G + E++ ++ Q+T ++D++ +
Sbjct: 353 LQQLV-----RVFECLGNYCDELAKALPKNLGKH-EEIITTNSLLQKTG--VLDLLNMHD 404
Query: 351 AAELLQEDKLQNKKSTTACRIESISNILKI---IFRDKGTAHSAYYRVH----------- 396
E L E K+ NK S A ++E++ N F+ + T + +YR+
Sbjct: 405 LEEYLNESKIINKISGYATKVETVMNNTDSDDKAFKTRSTFVTGFYRIQSFMLALSNAEK 464
Query: 397 ----VREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFA 452
+ ++ ++ D + K TL + NP ++ + E S+IL GT++P+ F
Sbjct: 465 DGRVLSSSERSSTD--EKKVVVTLRYQLLNPSETFRDVAS-EARSVILAGGTMAPISDFR 521
Query: 453 QELKLNFP-------LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELG 505
+L FP L H++ + + +VP GPS L + +R + +LG
Sbjct: 522 TQL---FPYLGPDQFLEFACAHIVPQENLLVRVVPHGPSKTPLELKFASRGDNKLLDDLG 578
Query: 506 NTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS 565
+I NI +V DG++ FFPSY ++D WK + + R+ KK EP+ S+
Sbjct: 579 QSISNICNVVKDGIVCFFPSYAILDSLRDRWKTSG------LLSRLENRKKVFNEPKSSA 632
Query: 566 LFPLAIEDYMAKLKDTS--TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDP 623
++DY + + + +GA+ FAV GK+SEG++F++ RAV++ G+P+
Sbjct: 633 DVETTLKDYASAITSPTLPQTGALLFAVVGGKLSEGINFSNELCRAVIVIGIPYPNANSI 692
Query: 624 KVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
+++ + +Y A++ G +E +G Y+ A +AVNQ++G+ IRH +D+ +II
Sbjct: 693 ELKERIKY----AETLSGGKRE------AGAALYSNMAFKAVNQSIGQSIRHANDWSSII 742
Query: 684 FCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRF 722
D R+ + + ++ WI +Q FG +V L +F
Sbjct: 743 LLDSRYGTENSQKKLPGWINSSLQISDNFGKLVKDLAQF 781
Score = 44.3 bits (103), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 19 DCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
D Q +M + Q+++ + ESPTGTGK+L ++C+TL W S
Sbjct: 3 DIQKEFMRHLFQAVEEHKVGIFESPTGTGKSLSIICSTLTWLHS 46
>gi|393212456|gb|EJC97956.1| DNA repair helicase [Fomitiporia mediterranea MF3/22]
Length = 863
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 193/698 (27%), Positives = 311/698 (44%), Gaps = 111/698 (15%)
Query: 97 ILYTSRTHSQLRQVIQELK------------------------TSNYRPKMVILGSREQL 132
+ + SRTHSQL QVI EL+ +S+ P+ V L SR L
Sbjct: 207 VFFASRTHSQLSQVIHELEKLKPDGFNREIEEDSRISPRNGNGSSSPLPRSVSLASRTHL 266
Query: 133 CIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE----------- 181
CI+ ++ R + + CR L + RC Y+ P LG+E
Sbjct: 267 CINEKLRA-RTADLDEGCRELLQGRQEDRC-------PYL---PQLGEEDRLHDIRDRIL 315
Query: 182 --PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
P DIEDLV+ G+ CPYF +R + ++V PYN L+ R+ L ++ + ++I
Sbjct: 316 ASPKDIEDLVSTGKELRLCPYFGSRSAVSSAELVTLPYNLLLHSRSRQALEIDLTDQVVI 375
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
DEAHNL + +LS+ LL I + TR L ++ L+
Sbjct: 376 VDEAHNLIETLLQLHTVELSTSLLRRAIQQLAKYFSRFRTR--------LTTNHAVHLKR 427
Query: 300 LLLKLE----------KRIAEVPINSKELGFTKPGPYIYELLADLNI--------TQETA 341
LLL L + VP + + + + + D+N T + A
Sbjct: 428 LLLFLRALENFAGSCSNKTPSVPEHEVVMSVSAFVDNMGSKVNDINFLELHSYLTTSKIA 487
Query: 342 YKLIDIVEVAAELLQEDKLQNKK-STTACRIESISNILKIIFRD-KGTAHSAYYRVHVRE 399
+K+ E +E +Q ++ S + + + + + + +GT +A +
Sbjct: 488 HKVSRYSEEGEVGTEEPTVQKERVSGSVLPVHVVEAFIASLANNAEGTNDTATLHLF--- 544
Query: 400 ADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
AD ++ D + + + NP E + +IL GT+SP+ +L F
Sbjct: 545 ADKSSPD------EKRIRYQHLNPATHFDEIVQ-NARCVILAGGTMSPIPDVTLQL---F 594
Query: 460 PLRVEN-------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
P E+ HVI + + ++ GP G L Y+ RD ELG + N+
Sbjct: 595 PTIPEDRLSVFSCGHVIPHENLKCVVLGKGPLGRDLEFKYKARDDQSLTDELGQCLSNLV 654
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIE 572
I P+G+++FFPSY +D+ + W TS+G I +RI K K+ EP +SS +
Sbjct: 655 SISPNGIVVFFPSYTFLDRVKSRW--TSNG----ILDRIQKKKQVFFEPHESSEVENVLR 708
Query: 573 DY---MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
DY ++ T GA+ AV K+SEGL+FAD RAVV+ G+P+ + P++R +
Sbjct: 709 DYSIACTQVTTGPTKGALLLAVVGAKLSEGLNFADELARAVVLVGIPYPNLGSPELRERM 768
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
+YLD + +G +G + Y A RAVNQ++GR IRH++D+ A+I D R+
Sbjct: 769 KYLDKKMVGRGNNTGR------AGNELYENLAMRAVNQSIGRAIRHQNDWAALILIDNRY 822
Query: 690 AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+ ++ WI+ +I FG V L F+R +R
Sbjct: 823 KSQKVQQKLPGWIRQNITTPQSFGQAVKELGEFYRAKR 860
>gi|336382459|gb|EGO23609.1| hypothetical protein SERLADRAFT_349743 [Serpula lacrymans var.
lacrymans S7.9]
Length = 848
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 193/691 (27%), Positives = 310/691 (44%), Gaps = 89/691 (12%)
Query: 97 ILYTSRTHSQLRQVIQELK-------------------------TSNYRPKMVILGSREQ 131
I Y SRTHSQL Q++ EL+ Y+ + V LGSR+Q
Sbjct: 186 IYYASRTHSQLSQILPELRKLKFKHSSPPRSNDDDDENDSQQDDQKYYKWRTVSLGSRKQ 245
Query: 132 LCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE----PIDIED 187
LCI+ V L G + CR L ++ ++RC H D ++ L D+ P DIED
Sbjct: 246 LCINDAVKLKHGDL-DERCRKLREEKADKRCEHLPGAEDELRML-ELRDQILATPKDIED 303
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
L GR CPY+ +R ++V PYN L+ R+ LG++ + I++ DEAHNL
Sbjct: 304 LAAAGRNALTCPYYGSRRAIPQAELVTLPYNLLLQRPAREALGIDLTDQIVVIDEAHNLI 363
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKR 307
+S L+ L+ + + + R S+ L+ L L ++K
Sbjct: 364 PTLLALSSTRLTRRTLSTSLHQL--SVYFQKFRNRLSAGHVLH---LKRLITFLEAVQKH 418
Query: 308 IAEVPINSKELGFTKPGPYIYELLADLNITQETAYKL--IDIVEVAAELLQEDKLQNKKS 365
IAE S + G K + E++ Q K+ I+++E+ L+ K+ K S
Sbjct: 419 IAE--WKSSKDGVQKLSDKV-EVMTPQEFVQRLGRKVDGINLLEIET-YLRNSKVARKIS 474
Query: 366 TTACRIESISNI--------------LKII--FRDKGTAHSAYYRVH---VREADANAAD 406
++ +S + L ++ F + A S R+ ++ +D + +
Sbjct: 475 GYCEKVAGVSPLHDSSAGDHIAAAAPLLVVEGFMQRLAAASEDGRIILSIIKTSDGDDVE 534
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
V + NP ++ + + ++L GT+SP+ +L FP +
Sbjct: 535 V---------KYQLLNPSTIFRDVADVS-RCVVLAGGTMSPIQDVVNQLFAYFPTEKLST 584
Query: 467 ----HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
H+I + I A +V GP G L +YR + + ELG I N+ IVP GL++F
Sbjct: 585 FSCGHIIPASNIQALVVGKGPRGGDLEFNYRGQSDKQMIAELGQIIFNLCSIVPGGLVVF 644
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS 582
FPSY ++ W +T + E+ KK +EP SS + +Y + + ++
Sbjct: 645 FPSYSYLNVVKEEWGSTR------MLEKFEGKKKVFMEPPDSSEVEAVLREYAVEARSSN 698
Query: 583 T------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
+GAV FAV K+SEGL+F+D RAVVI G+PFA T P +R + +Y +
Sbjct: 699 VRPRGRRAGAVLFAVIGAKLSEGLNFSDELARAVVIVGLPFANKTSPDLRERMKYANEME 758
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
+G K + + Y AVNQ++GR IRHR D+ ++I D R+ + ++
Sbjct: 759 ARRG--VKRNHGEKDAASELYENMCMNAVNQSIGRAIRHRSDWASLILVDRRYRSSAIQA 816
Query: 697 QISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
++ WI I FG V L FFR++R
Sbjct: 817 KLPRWIASGIMATETFGQTVKQLGTFFRDKR 847
Score = 43.1 bits (100), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKT 49
FP+ Y Q+ M+ V S++N+ A++ESPTGTGKT
Sbjct: 19 FPYNPYPIQIDLMQHVYSSIENRQVAIVESPTGTGKT 55
>gi|392577022|gb|EIW70152.1| hypothetical protein TREMEDRAFT_29466 [Tremella mesenterica DSM
1558]
Length = 840
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 197/712 (27%), Positives = 306/712 (42%), Gaps = 108/712 (15%)
Query: 74 NNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK----------- 122
+N+++G + S + I + SRTH+QLRQ+ EL + + P
Sbjct: 170 DNEVNGGEGEYLSVE--------IYFASRTHTQLRQLTSELLKTTFVPSSSDTPDSEGDT 221
Query: 123 ----MVILGSREQLCIHREVSLLRGSA----QNNACRFLCKKGTNRRCNHHSRVADYMKN 174
MV LGSR+QLCI+ +V L + N AC + K VA
Sbjct: 222 HGISMVPLGSRKQLCINDKVRALARNGGDERMNEACLDMQKSSECEFLPKSEDVAMLDAR 281
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
+ L E DIED+V +GR G CPY+ TR K +V PYN L+ R+ L ++ K
Sbjct: 282 DAVLA-EVRDIEDIVQMGRKCGVCPYYSTRRAVKQAQLVTLPYNLLLQKNAREALDIDLK 340
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNF 294
+++ DEAHNL S L+ LT+ IS+ + + TR L P +
Sbjct: 341 GQVVVIDEAHNLIDTILSIHSTTLTHHHLTSAISQLQQYLSRFKTR--------LKPIHT 392
Query: 295 AILRALLLKLEKRIAEVPINSKELGFTKPGPYIYEL--------LADLNITQETAYKLID 346
+R L L ++ L F+ P + D+N A D
Sbjct: 393 LWIRQTLSVL------TGLSKVCLSFSTATPSSSNSSQNKSRSEMMDVNTFMARAGGSTD 446
Query: 347 IVEVA--AELLQEDKLQNKKSTTACRIESISNILKIIFRDKG------TAHSAYYRVHVR 398
V + L+E KL K S A ++E S R+KG T H+A H+
Sbjct: 447 QVNLMDLVRYLKESKLARKVSGFAEKVEEASKK-----RNKGERSDVRTRHAAIAAFHLV 501
Query: 399 E--------ADANAADVLKGKASR-TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMD 449
E A + +L + + L + NP +E + S++L GT+ P++
Sbjct: 502 ESFLLSLTDAKDDGRVILSDEGGKLELRYILLNPAERFREVVE-QARSVVLAGGTMEPIN 560
Query: 450 SFAQELKLNFP-------LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
F ++L FP + + HVI + +V GP L Y NR
Sbjct: 561 DFLRQL---FPFVTPSRIITLSCSHVIPKSNLLTQVVSCGPRKIELEFKYSNRSDDSLLA 617
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
ELG+ I++ +VPDG+++F PSY +D+ W T + ++ + K EP+
Sbjct: 618 ELGSVILSTVGLVPDGIVVFLPSYSFLDKIKHTW--------TAVLPKLAEKKHVFYEPQ 669
Query: 563 QSSLFPLAIEDYMAKLKDTS-------TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
S + DY + S GA+ FAV GK+SEG++F+D GR V++ G+
Sbjct: 670 TSGEVETVLRDYSLAISTVSPPGIGDKRKGALLFAVVGGKLSEGINFSDRLGRCVIMVGL 729
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PFA + ++ + +Y+ + KE Y RAVNQ++GR IRH
Sbjct: 730 PFANIASVELSERMKYVSGLPGAGPDASKE----------LYENLCMRAVNQSIGRAIRH 779
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+DY I+ D+R+A + ++ WI+ +Q + V L FFRE+R
Sbjct: 780 ANDYACILLVDKRYASQRIRRKLPKWIREDVQVPPDWAGVARGLAGFFREKR 831
>gi|358054721|dbj|GAA99647.1| hypothetical protein E5Q_06350 [Mixia osmundae IAM 14324]
Length = 830
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 185/657 (28%), Positives = 308/657 (46%), Gaps = 65/657 (9%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGS---AQNNACR 151
+ Y SRTHSQL Q +QE++ +++ ++V LGSR LCI+ ++ G N C
Sbjct: 201 VYYASRTHSQLAQFVQEIRKTSFADTTRIVPLGSRASLCINDKLKKACGGNTETLNERCL 260
Query: 152 FLCKKGTNRRCNH--HSRVADYMKN-NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQK 208
L K RC D M + +D+EDL ++GR CPY+ +R +
Sbjct: 261 ELQKAEKGSRCEFLPSQEEEDKMIGFRDRILATTLDLEDLEDLGRATHVCPYYGSRRAIR 320
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
+V PYN L+ R+ LG+ K I+I DEAHNL + ++S ++ +S
Sbjct: 321 QAHVVTLPYNMLLQHAARESLGISLKGHIVIIDEAHNLIDTVLSINTVSIASTSISNALS 380
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI---AEVPINSK---ELGFTK 322
+ + TR S+ L L A+ +LE +E N+K EL K
Sbjct: 381 GVQLYLQRFKTRLKGSNTVYLKQ-----LLAIFRRLEAYCITWSESRQNAKAIEELMLPK 435
Query: 323 PGPYIYELLADL--NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKI 380
L+ DL +I Q +KL ++ + + N ++ R + N K+
Sbjct: 436 A------LMEDLQGSIDQVDLHKLAAYMKTSKIAHKISGYANMQAEKQARAQQKPNKHKV 489
Query: 381 I----------FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEF 430
+ F T S R+ V A A++++V +L + NP + +
Sbjct: 490 LLVNAVYQIQSFLLALTNPSRDGRIIVSRA-ADSSNV-------SLRYLLLNPADSFRSI 541
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNF-----PLRVENPHVITSKQIWAGIVPVGPSG 485
+ S+IL GT+SP+ F +L + P+ + HV+ + I ++ GP+
Sbjct: 542 VD-DARSVILAGGTMSPLSDFDNQLFGHLAADQKPMALSCGHVVPRQNISVSVIRSGPTK 600
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
+Y NRD++ Q+LG+ I +AR+ P G++ F PSY +D+ A WK++
Sbjct: 601 QDFRFTYENRDNLAMLQDLGSAIATLARVCPAGIVCFVPSYAFLDKLQAVWKSSG----- 655
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
+ ERI K+K +EP+ + ++ Y + + GA+ FAV K+SEG++FAD
Sbjct: 656 -MIERIRKNKLIFMEPKTAGEVDAVLKGY-STANSSGNKGAILFAVVGAKLSEGINFADD 713
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
RAV+I G+P+ +++ + +L E K+ K G+ Y+ A RAV
Sbjct: 714 MARAVIIVGIPYPNAASTELKERMHHL-------SAESKKRKEITDGGDQLYSNLAFRAV 766
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRF 722
NQ++GR IRH +D+ +I+ D R+A P+ ++++ WI +Q FG V+ RF
Sbjct: 767 NQSIGRAIRHANDWASILLIDTRYATPALQAKLPQWIASEVQVPESFGLVLQKTARF 823
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D P++ YD Q M V ++++ A++ESPTGTGK+L L+C+TL+W
Sbjct: 10 DFNHPYKPYDIQSDLMRHVYKAIECSRPAIVESPTGTGKSLSLICSTLSW 59
>gi|302889483|ref|XP_003043627.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724544|gb|EEU37914.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 863
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 191/684 (27%), Positives = 316/684 (46%), Gaps = 83/684 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP-----------------KMVILGSREQLCIHREVS 139
I YTSRTHSQL Q I EL+ + P K+V L SR++LCI+ +VS
Sbjct: 207 IYYTSRTHSQLSQFITELRRPTFPPSLPTSLAKDEESKTEAVKLVPLSSRQRLCINPQVS 266
Query: 140 LLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGR 193
L GS Q N+ C L K + ++C + D + D + DIEDL ++G+
Sbjct: 267 RL-GSVQAINDRCAELQKPKSGKKCPFVPK-EDLLSETHQFRDSALATLPDIEDLHHLGK 324
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD- 252
+ CPY+ +R +I+ PY L+ R LGV+ + S++I DEAHN+ A+
Sbjct: 325 SLSVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEGSVVIIDEAHNIMDAVANV 384
Query: 253 -AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
AA LS + + + + R G+ + +N N + ++ L + +
Sbjct: 385 HAAEIRLSD------LRRGRGMLGVYVKRFGKKL-KGVNRVNVGRVGRVIEGLSEWMDGA 437
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
+ G P +L I Q ++LI + +QE KL K + A +
Sbjct: 438 LKFKAKHGIVDPN----DLTRPKGIDQINMFELI-------QYIQESKLAFKIESYASHV 486
Query: 372 E----------SISNILKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWW 419
E S + +L + F T S+ R+ ++ A D+ LS+
Sbjct: 487 ENEEAPTKTPKSTTPVLHTLVSFLVALTNLSSEGRIFYQKIKGGAPDI-------QLSYL 539
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF-PLRVEN---PHVITSKQ-- 473
+P A + +++L GT+SP D + L + P +V HVI +
Sbjct: 540 LLSPTHAFSSIAS-SARAVVLAGGTMSPFDDYKDHLFPSLEPEKVTTLSCGHVIPPENLC 598
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+W + P S++ R E +LG I+N+ +VPDG++IFFPSY +D+ +
Sbjct: 599 VWT-LASSRPGMPPFEFSFQKRSDPEMITQLGLAILNLCSLVPDGVVIFFPSYGYLDEVV 657
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS--GAVFFAV 591
A W+ + N IWER+ K E + +S + +++Y ++ ++ GA+ +V
Sbjct: 658 AAWQKSHGANAQPIWERLATRKALFKESKGASSDEI-LQEYTNAIQGEGSNGKGALLLSV 716
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ----SQGGEYKE-T 646
GK+SEG++F+D GR V++ G+P+ + P + K EY++ Q +QG +E T
Sbjct: 717 VGGKMSEGINFSDRLGRCVIVIGLPYPNIASPDWKAKIEYIETTTQTNLITQGIPKEEAT 776
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+Y RAVNQ++GR IRHR DY AI+ D R+ + ++ WI+ +
Sbjct: 777 SRGKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIVLVDRRYGTDRIRGKLPGWIRGGL 836
Query: 707 QCYSK---FGDVVYTLTRFFREER 727
S G ++ + FFR +R
Sbjct: 837 VGDSHEKGLGGLMGAVGGFFRGKR 860
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAW 59
+ +D P+ YD Q +M+ V L+ N +LESPTGTGK+L L+CA+L W
Sbjct: 13 LENLDFHHPYTPYDVQEQFMKTVYNVLETGNGQVGILESPTGTGKSLSLICASLTW 68
>gi|302818654|ref|XP_002991000.1| hypothetical protein SELMODRAFT_132642 [Selaginella moellendorffii]
gi|300141331|gb|EFJ08044.1| hypothetical protein SELMODRAFT_132642 [Selaginella moellendorffii]
Length = 834
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 201/692 (29%), Positives = 322/692 (46%), Gaps = 91/692 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I + SRTHSQL Q I+ELK +++ K + LGSR+ LC++++V L GSA N+ C
Sbjct: 165 IFFCSRTHSQLSQFIRELKRTSFSTSLKTIALGSRKTLCVNQDV-LKLGSASRINDRCLD 223
Query: 153 L-----------CKKGTNRRCNHHS--RVAD------------YMKNNPH--------LG 179
L + + +HH+ +V D ++K +
Sbjct: 224 LQKKKKSSSQKVSTRNSPSFVSHHNFFQVDDQRVIKSKTSACPFLKKQRQRKQFKEAVVA 283
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
+P+DIEDLV++G+ G CPY+ +R +V PY L+ R+ LG+ K+S++I
Sbjct: 284 SQPMDIEDLVHLGQKLGSCPYYGSRNSLPMAQVVVLPYQSLLHAATRESLGINLKDSVVI 343
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
FDEAHNL + S LS+ L S+ + TR L P N ++
Sbjct: 344 FDEAHNLVDTVTNTYSSQLSTLQLRQVSSQLSEYLSRFRTR--------LAPANRRYIQT 395
Query: 300 LLL---KLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKL-IDIVEV--AAE 353
LL+ L +R+ V KE PG + A + + + L ID + +
Sbjct: 396 LLVLVQALLERLMSVGSREKE-----PGVQDVQTPAAITTINDFVFSLGIDNINLFKLCR 450
Query: 354 LLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKAS 413
++E + NK S + S N L G A + V + A ++ VL ++S
Sbjct: 451 YIKESNIVNKVSGYGDKYLSQQNELSPS-STAGFHALAAFLVSLTTAQSDGR-VLIVESS 508
Query: 414 RTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITS 471
+ F A + FS + + ++IL GTL P+ L P E+ H +
Sbjct: 509 DGECMFKFLMLDAAKHFSEVVQQARTVILAGGTLQPVAEMRDRLLFQVP--DESLHFFSC 566
Query: 472 KQIWAG--IVPV----GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
I G I+P+ GPSG + +Y++R S + +ELG +VNI+ IVP+G+++FFPS
Sbjct: 567 GHIVPGESILPLAIAKGPSGKTFDFTYQSRSSPQMIEELGRLLVNISVIVPEGIVVFFPS 626
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSG 585
+ Q CW + I I K K EPR +S +++Y + T+ G
Sbjct: 627 FEYESQVHKCWDKSG------ILSSILKKKNIFREPRNASAVEAVLQEYKTSI--TTGGG 678
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD-------LQAQS 638
A+ +V GK+SEG++F+D GR VV+ G+P+ + DP++ K +Y+D + S
Sbjct: 679 ALLLSVVGGKMSEGINFSDGMGRCVVMVGLPYPSSRDPELLEKIKYIDELNNTKNRKESS 738
Query: 639 QGGEYKETKLSFLS----GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
+ T + G D+Y +AVNQ++GR IRH DY AI+ D R+
Sbjct: 739 SPPSQQRTGFTLQQCGHRGRDYYENLCIKAVNQSIGRAIRHAKDYAAILLLDGRYVTTGG 798
Query: 695 -KSQISLWIQPH-IQCYSKFGDVVYTLTRFFR 724
+++ WI+ H + FG+ + L FF+
Sbjct: 799 PAAKLPEWIKEHLVVVRGGFGE-AHRLLLFFK 829
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLG 70
FPF+ Y QL M V +L+ A++ESPTGTGKTL L+C+ L W + GS S+ G
Sbjct: 9 FPFQPYAIQLQLMRAVYGALEKGGVAIVESPTGTGKTLSLICSVLQWLEDRGSDSSRG 66
>gi|430812749|emb|CCJ29870.1| unnamed protein product [Pneumocystis jirovecii]
Length = 850
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 199/696 (28%), Positives = 326/696 (46%), Gaps = 87/696 (12%)
Query: 89 SGDSKLP---TILYTSRTHSQLRQVIQELKTSNY---------RP-KMVILGSREQLCIH 135
+ D + P I+Y SRTHSQL Q I EL+ ++ +P + + L SR+ LCI+
Sbjct: 185 TDDDRYPEELKIIYASRTHSQLTQFINELRRVSFPSTFQDNTVQPVRHIALASRKNLCIN 244
Query: 136 REVSLLRG-SAQNNACRFLCKKGT--NRRCNHHSRVADYMKNN--PHLGDEPIDIEDLVN 190
VS L + N C L K T RC + + +N H DIEDLV
Sbjct: 245 PNVSKLSNINLINEKCIELQKHNTIPEGRCRYLPKDDKTKIHNFRDHALANIRDIEDLVI 304
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ +R K +I+ PY L+ R+ L + KN+I+I DEAHNL
Sbjct: 305 LGQKLDICPYYSSRTALKLAEIITLPYPLLLQASARETLNLSLKNNIVIIDEAHNL---- 360
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA- 309
D + SS + + +S A N I+I ++ ++ L N ++ ++KL K I+
Sbjct: 361 IDTITSIYSSTITFSQVSLAMNQINIYLSK----FNKKLKGKNLVYIKQ-IIKLLKNISN 415
Query: 310 ----------EVPINSKELGFTKPGPY--IYELLADLNITQETAYKLIDIVEVAAELLQE 357
++ + E+ F G IY+L + A K+ + E ++ L +
Sbjct: 416 FMECKNNIIGDIQVEQSEILFYGGGDQVNIYKLEKYMK-NSGLARKVDEYFEKKSKNLDQ 474
Query: 358 DKLQNKKSTT-ACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTL 416
K +K+ I S + + T ++ H+ +A N K L
Sbjct: 475 TKTNTEKNIILGLPILSHIQTFLLNLTNPFTEGKIFFG-HIEKAQING----KTNTDCYL 529
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL-------RVENPHVI 469
+ NP +E E ++IL GT+ PMD F +L FP R H+I
Sbjct: 530 KYLLLNPCYQFKEIVN-EARAVILAGGTMEPMDDFIYQL---FPYLQKEKIHRFSCGHII 585
Query: 470 TSKQIWAGIVPVGPS--GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
+ + A IV GP+ ++ N RN D I ELG+ ++N+ R++PDG++ FFPSY
Sbjct: 586 SPDHLCAIIVSTGPTRKEFIFNYEKRNNDDI--LNELGSALINLCRVIPDGVICFFPSYD 643
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS--- 584
+++ + W + G +IWER+ + KK + +++Y + ++TS
Sbjct: 644 YLEEIVKKW-HIKQGTKLSIWERLEQKKKFSTDIEN------MLQNYSNTINSSNTSHYN 696
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS------ 638
GA+ +V GK+SEG++F+D GR V+I G+PF + + + K E+++ +
Sbjct: 697 GALLLSVIGGKLSEGINFSDKLGRGVIIVGLPFPNIQSAEWKAKLEFVENNFRQNFLNNP 756
Query: 639 --QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
Q G + S +++Y R+VNQ++GR IRHR+DY AIIF D+R+ +
Sbjct: 757 SIQKGSIENLIKSI--RKEYYENTCMRSVNQSIGRAIRHRNDYAAIIFLDKRYESEHIRD 814
Query: 697 QISLWIQ-----PHIQCYSKFGDVVYTLTRFFREER 727
+IS WI+ P + FG ++ L FF ++
Sbjct: 815 KISKWIKNSIISPDKETKDNFGLLLKHLINFFENKK 850
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
PF+ Y Q +ME + +++ ++ +SPTGTGK+L ++C L W
Sbjct: 10 PFKPYKIQNEFMEALYLAIEAGGVSIFDSPTGTGKSLSIICGALTW 55
>gi|312076541|ref|XP_003140907.1| hypothetical protein LOAG_05322 [Loa loa]
Length = 704
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 192/642 (29%), Positives = 298/642 (46%), Gaps = 115/642 (17%)
Query: 184 DIEDLVNIGRTFGP--CPYFMT-RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
D+EDLV + P CPYF T R L DI+F P++YLIDP R G+ KN+++I
Sbjct: 60 DVEDLVKALKCSTPSLCPYFSTARVLIDDADIIFCPFSYLIDPIIRANSGLSLKNTVVIL 119
Query: 241 DEAHNLE-----------------GICAD----AASFDLSSGLLTACISEAKNCIDISST 279
DEAHN+E G AD AA + + A + + I+ +
Sbjct: 120 DEAHNVEDVCREAVSFTFMERELVGATADLYQKAAELEKELTKVDAKVVAEEGLIETEDS 179
Query: 280 RRGQSSD-ETLNPDNFAILRALLLKLEKRIAEVPINSKE--------LGFTKPGPYIYEL 330
R G+ + + +F + L K+ +V N+ + L +T ++
Sbjct: 180 RAGRYKECLEVMKGHFKTVINFLNKILDWFVDVSSNALQSASMKNDRLTYTYKWEKLFTT 239
Query: 331 LA--DLNITQET----AYK--LIDIVEVAAELLQEDKLQNKK------STTACRIESISN 376
L DL+I +T AY L + + + D+ Q+ +TTA +E
Sbjct: 240 LTSNDLDIFSKTGKGTAYSGLLEAFISITGACNENDEFQSYLKHYKLCATTAICVEKFLY 299
Query: 377 ILKIIFRDKG-TAHSAYYRVH-------------VREADANAADVL-------------- 408
K FRD TA+ + + V + +N+ D+L
Sbjct: 300 FFKSYFRDDNRTAYKLFVCIDKPFVPYSQSNIFDVAKNSSNSIDILDMSSYDKEKEEWLD 359
Query: 409 ---KGKASR--------TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
+ K R +S+WC P +A + + S+IL SGTLSP D+F EL
Sbjct: 360 STIRLKGYREVKYGYRVAISFWCMRPSLAYTDAFK-GCRSVILASGTLSPTDTFRTELGT 418
Query: 458 NFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR--NRDSIEYKQELGNTIVNIARIV 515
F +E +I +QI+A ++P GP+G L +YR NRD + +E+ + ++ +I+
Sbjct: 419 TFHQEMEGNQIIPDEQIFAAVIPSGPNGEKLCGTYRIINRDD-RFIREISLILSHVCKII 477
Query: 516 PDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
P G+L FF SY ++DQ + T I +I K + EPR+SSL + Y
Sbjct: 478 PKGVLCFFSSYRVLDQIY------EYMETTGILRQIQNIKLVLKEPRRSSLMNTVMMQYE 531
Query: 576 AKLKDT-----STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKRE 630
+ ++ +GA+ AV RGKVSEG+DF D R VV G+PF + D +V K++
Sbjct: 532 NAIVNSFDFGPQCTGALLMAVFRGKVSEGIDFTDDRARCVVTVGIPFPSAMDEQVVEKKK 591
Query: 631 YLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF- 689
Y D TKL LSG++WY QA RA+NQA+GR +RHR D+G+I+ DER
Sbjct: 592 YNDDYC---------TKLRILSGDEWYTMQAYRALNQALGRCLRHRSDWGSILMLDERLL 642
Query: 690 ---AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERI 728
A+P+ K ++S WI+ ++ + + + LT F + I
Sbjct: 643 QIRANPNAK-KVSRWIREQLRPLTNYEHFLSELTSFVNKMEI 683
>gi|340381260|ref|XP_003389139.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 298
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/264 (44%), Positives = 155/264 (58%), Gaps = 37/264 (14%)
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
L+ HVI Q+W G+V GP LNSSY+ R + Y LGNT+VN RI+PDG+L
Sbjct: 10 LKKPGSHVIGQDQVWIGVVSKGPDNIHLNSSYQTRFTPAYMDSLGNTLVNFFRIIPDGVL 69
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD 580
+FFPSY +M+ + WK + Y K+
Sbjct: 70 VFFPSYVVMETLVTHWKEV-------------------------------MSAYYEKIGS 98
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
G FF VCRGKVSEGLDFAD+ GRAV+ITG+P+ +PKV+LK EYL A+S
Sbjct: 99 ADKVGGAFFGVCRGKVSEGLDFADNNGRAVIITGLPYPPFAEPKVQLKMEYLK-DARS-- 155
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL 700
+ T+L ++ + WYNQQA+RAVNQA+GRVIRH++DYGAII CDERFA+ + + L
Sbjct: 156 -NFNRTEL--ITDKQWYNQQATRAVNQAIGRVIRHKNDYGAIILCDERFAYSRGQDDLPL 212
Query: 701 WIQPHIQCYSKFGDVVYTLTRFFR 724
W++P +Q Y KFG LT FF+
Sbjct: 213 WLRPQLQKYDKFGPAQRDLTSFFK 236
>gi|393243158|gb|EJD50674.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 801
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 185/645 (28%), Positives = 302/645 (46%), Gaps = 54/645 (8%)
Query: 97 ILYTSRTHSQLRQV-IQELKTSNYRPKMVI-LGSREQLCIHREVSLLRGSAQNNACRFLC 154
I + SRTH+QL Q+ ++ LKT + R K V+ L SR+ LCI+ E+ G + CR +
Sbjct: 185 IYFASRTHTQLSQLRVELLKTPDGRMKRVVPLASRKNLCINDELKR-SGVDIDEGCRAML 243
Query: 155 KKGTNRRCNH---HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
+RC + ++ + H+ P DIEDLV +G+ CPYF +R +
Sbjct: 244 SGDKGKRCPYLPPPDELSQMLDFRDHILASPKDIEDLVTLGQELRTCPYFGSRRAVASAQ 303
Query: 212 IVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
IV PYN L+ R+ G++ K ++I DEAHNL S L+ L +S+
Sbjct: 304 IVTLPYNLLLQKSAREATGIDLKGHVVIIDEAHNLIDTMLSIHSVALNLKTLRESLSQL- 362
Query: 272 NCIDISSTRR--GQSSDETLNPDNFAIL------RALLLKLEKRIAEVPINSKELGFTKP 323
N +R G+ NF AL K E R+ VP LG
Sbjct: 363 NIYHGKFKKRLAGRHLLHLRRLLNFLTALEAFCAEALKKKEESRLWAVPDLEGALGKKAE 422
Query: 324 GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR 383
G + E+ + L ++ A K+ + AA+ +E+ KK + ++ + +
Sbjct: 423 GINLLEIHSYLRASK-LARKVSSYTDKAAQ--KENG--GKKVLVTPPLHAVEGFITAL-- 475
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSG 443
+ SA R+ V + NAA+ + L + NP QE E +++L G
Sbjct: 476 ---SGASADGRIFV---NVNAAE-----GTLQLKYQLLNPAPHFQEIIN-EARAVVLAGG 523
Query: 444 TLSPMDSFAQELKLNF--PLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
T+SP+ F Q+L L F P R+ + HVI + + A ++ P G L +Y R
Sbjct: 524 TMSPISVFEQQL-LPFLPPERLASFACGHVIPRENLCALVLSKSPQGTSLTFNYEKRSDK 582
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
+LG ++N+ RIVPDG+++FFPSY + + K + +W++I K
Sbjct: 583 TLMSDLGMVLLNLVRIVPDGMVVFFPSYAFLATVQSQLKESG------LWDKIGARKPLF 636
Query: 559 VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFA 618
EP S + +Y A + +++ + AV K+SEGL+F+D RAVV+ G+P+A
Sbjct: 637 TEPNDGSSVEEVLREYGAAIASGASA--LLLAVVGAKLSEGLNFSDGLARAVVLVGLPYA 694
Query: 619 TMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
+ P+++ + ++ + G K +G + Y RAVNQ+VGR IRH+ D
Sbjct: 695 NLNSPELKERMRFV----REAAGPTKPGARD--AGMEMYENMCMRAVNQSVGRAIRHKGD 748
Query: 679 YGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ A+IF D R+ ++++ WI + + +G L RF+
Sbjct: 749 WAALIFVDARYGSNRVRAKLPGWISADLAVHDAYGAAAGQLVRFY 793
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 12 EFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
+FPF Y QL M+ + +++ A+LESPTGTGKTL L+C+ L W
Sbjct: 17 QFPFPPYSIQLELMKHLYAAVEASKLAILESPTGTGKTLSLICSALQW 64
>gi|74146859|dbj|BAE41393.1| unnamed protein product [Mus musculus]
Length = 824
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 280/544 (51%), Gaps = 76/544 (13%)
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD 286
K + ++ K ++I DEAHN+E ++AS+ ++ L E + I+ G
Sbjct: 308 KHMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSLIN------GNIRK 361
Query: 287 ETLNPDNFAILRALLLKLEKRIAEVPINSKEL---GFTKP-----GPYIYELLADLNITQ 338
++ P LR + L I + NSK L G+ G + L + IT
Sbjct: 362 KSHEP-----LRDVCYNL---INWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGIT- 412
Query: 339 ETAYKLIDIVEVAAELLQEDK---LQNKK---------STTACRIESISNILKIIFRDKG 386
TA + ++A L +E+K + K+ ++T ++ + +L +FR+
Sbjct: 413 -TATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRE-N 470
Query: 387 TAHSAYYRVHVREADANAADVL------------KGKASR------TLSWWCFNPGIAMQ 428
+ + Y+V +++ + A + K SR L++WC NP +A
Sbjct: 471 SRFADDYKVAIQQTYSWANQIAIFDKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAVAFS 530
Query: 429 EFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLL 488
+ + +V +I+LTSGTLSP+ SF+ EL + F +++E HVI++ Q+W G V GP G L
Sbjct: 531 DIND-KVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVWVGTVGSGPKGRNL 589
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
+++++ ++ E++ E+G ++++ + V G+L F PSY L+++ W T +W
Sbjct: 590 CATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWI------FTGLW 643
Query: 549 ERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADH 605
+ K + EP+ + + F ++ Y +K GA+ AVCRGKVSEGLDF+D
Sbjct: 644 HSLESVKTVIAEPQGGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDD 703
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
RAV+ G+PF + D +V LKR+Y D ++S+G L G WY QA RA+
Sbjct: 704 NARAVITVGIPFPNVKDLQVELKRQYNDHHSKSRG---------LLPGRQWYEIQAYRAL 754
Query: 666 NQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFF 723
NQA+GR IRH++D+GA+I D+RF +P+R S +S W++ IQ +S F + +LT F
Sbjct: 755 NQALGRCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEFS 814
Query: 724 REER 727
R +
Sbjct: 815 RRHQ 818
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+ Y I G+ + FP AY QL M +++ L + + LLESPTG+GK+L LLC+ LAW+
Sbjct: 5 LSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQ 64
Query: 61 KSL 63
+SL
Sbjct: 65 QSL 67
Score = 47.0 bits (110), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSRE 130
Q NNQ + +V G K P I + +RTH Q+ Q+ +EL+ + Y M IL SR+
Sbjct: 226 QGNNQEPAN--TVKKDHGGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRD 283
Query: 131 QLCIHREV 138
C+H EV
Sbjct: 284 HSCVHPEV 291
>gi|344285337|ref|XP_003414418.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Loxodonta africana]
Length = 1240
Score = 233 bits (594), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 192/319 (60%), Gaps = 21/319 (6%)
Query: 412 ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITS 471
A L++WC NP +A + +V +I+LTSGTLSPM SF+ EL + F +++E HVI +
Sbjct: 570 AVHVLNFWCLNPAVAFSDIDE-KVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINN 628
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
Q+W G + GP+G L +++++ ++ E++ E+G ++++ + V G+L F PSY L+++
Sbjct: 629 SQVWVGTIGSGPTGRNLCATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEK 688
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-DTSTSGAVF 588
W +T +W + K +VEP+ + F ++ Y +K GA+
Sbjct: 689 LKERWHSTG------LWRNLELVKTVIVEPQGGDKTEFDELLQVYYDAVKYRGEKDGALL 742
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKL 648
AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++ +G
Sbjct: 743 VAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQVELKRQYNDQHSKLRG-------- 794
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLWIQPHI 706
L G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++PSR S +S W++ I
Sbjct: 795 -LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQQI 853
Query: 707 QCYSKFGDVVYTLTRFFRE 725
Q +S F + +LT F ++
Sbjct: 854 QHHSTFESALESLTEFSKK 872
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP +AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKINFPCKAYPSQLAMMNCIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 91/234 (38%), Gaps = 47/234 (20%)
Query: 40 LESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILY 99
L SP+GT + L + S SQ S +++ G SK+P I +
Sbjct: 196 LNSPSGTTNSFSLQSPPGHCSRCCCSPKQGNSQ------DSSNAIKKDHGGKSKIPKIYF 249
Query: 100 TSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGT 158
+RTH Q+ Q+ +EL+ + Y M IL SR+ C+H E + + C L
Sbjct: 250 GTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEA--VGNFNRKEKCMELLDGKN 307
Query: 159 NRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYN 218
+ C Y + H + ++ L G F + A +
Sbjct: 308 GKSC--------YFYHGVHKIRDQHTLQTLQ--GMMFSS---------------ILASTH 342
Query: 219 YL----IDPWFRK---------GLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
Y+ W +K G+ + K ++I DEAHN+E ++AS+ ++
Sbjct: 343 YMPVASSQLWHQKCLQILPDVLGMDINLKEQVVILDEAHNIEDCARESASYSVT 396
>gi|167384070|ref|XP_001736798.1| regulator of telomere elongation helicase 1 rtel1 [Entamoeba dispar
SAW760]
gi|165900684|gb|EDR26949.1| regulator of telomere elongation helicase 1 rtel1, putative
[Entamoeba dispar SAW760]
Length = 1030
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 245/999 (24%), Positives = 421/999 (42%), Gaps = 163/999 (16%)
Query: 13 FPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP++ Y Q+ M + Q+++ + L+ESPTGTGKTL LL +TL +
Sbjct: 85 FPYQPPYQPQIEMMNSIQQAVKEGKHLLMESPTGTGKTLVLLHSTLTF------------ 132
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQ 131
D + I+Y SRTHSQL QV+ E K K ++L SR+
Sbjct: 133 ------------------PDMR---IVYASRTHSQLAQVVNETKKIG-DIKGIVLASRDL 170
Query: 132 LCIHREVSLLRG-----SAQNNACRFL--CKKGTNRRCNHHSRV---------ADYMKNN 175
CI+ + + +A+ N L K R + +V A Y + N
Sbjct: 171 YCIYNPIRICDDKNYWCTAKPNVLETLKHIKPCPYRPFGNDGKVLPNVVMACQAVYKELN 230
Query: 176 PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI--------DPWFRK 227
+ + +DLV + + CPY+ +R K ++ PYN++ D +
Sbjct: 231 GVIKIQ----DDLVKVCQKHNLCPYYYSRWATKRSKLILCPYNFVTSVSIRHSSDIFLID 286
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDE 287
+ +L+ DEAHN+E D+ +F + LL I I R Q+ +
Sbjct: 287 ENDIHRHEFVLVMDEAHNVEDAFMDSLTFTFTETLLNRTIE----TIQFHQKRIKQTPE- 341
Query: 288 TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNIT---------- 337
N +F++L L+ +E + + ++ L F +Y + D
Sbjct: 342 --NFRSFSLLGELISTIES--FSIWMENRSLPFKDSEQCLYGVFEDQAFLPFIERSPSST 397
Query: 338 --QETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRV 395
E ++ I +V+ +L+QE L + + I +L I + + ++++
Sbjct: 398 RLTEAIFEYIKLVDNLDDLIQEPHL--IRYVNPFTTQYIEMVLFYIQVFRTPKLTKFFKI 455
Query: 396 HVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL 455
+ E + D+ R + + C +P + M R EV S+I SGTLSPM + AQEL
Sbjct: 456 IITERN----DL------REMLFRCLSPSLPMSLLQR-EVRSVIFASGTLSPMKAMAQEL 504
Query: 456 KLNFPL-----------RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
+ L + HV+ ++ ++ G + + E ++
Sbjct: 505 NIKEHLYKNIIISPGYRMLSTQHVVPPSHVFGRVIGSSSFGKSFIFTKKTSQDNEMIEQA 564
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQS 564
GNT+ + P G L+FF SY ++++ + WK ++ ++ K K +E +
Sbjct: 565 GNTMFRVLSKSPGGGLVFFASYSMLNRVVELWKQQG------VYTQLNKLKAIFIESKDK 618
Query: 565 SLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+ F ++Y S +GAVF V RGK+SEG+DF D R V+I G+P+ ++ D
Sbjct: 619 NEFKKDFKEYQI----LSKTGAVFLGVFRGKLSEGIDFGDDMARVVIIVGIPYPSLGDIN 674
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
V LKR+Y + LSG +WY+ QA RAVNQAVGRVIRH +DYGA +
Sbjct: 675 VNLKRDY--------NNQENLKNPDCLSGSEWYSIQALRAVNQAVGRVIRHINDYGAFLL 726
Query: 685 CDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGD 744
D+R++ K +S W++ + K + L FF + S IK E S
Sbjct: 727 LDKRYSTNPVKEMLSGWMKKSLVIADKNWE--QDLYNFFVQFSQSPS-----IKNE-SQK 778
Query: 745 VRELKPVDLLD-KISLEEVPSSTPAVDQACYSLHEVKNRNTSSHSGEIVPANRSSLS--- 800
V+E+K L+ KI EE+ V+ + ++ +P ++SLS
Sbjct: 779 VQEIKKESLVKCKIKSEELNKENQMVESKMSNGKVIR-----------IPTRKTSLSMKQ 827
Query: 801 -----PYKGIWASELKNSSDLIQFEKKLLLSGRKSIQYRDHEFIDLTSNSSLHAKPRKEE 855
++ ++ N+S F +++L Q + I T N ++KP K+
Sbjct: 828 NYSFPQFRTTAPTQPNNNSTKDVFTSQMIL------QNKPDPIIIRTFNIKTNSKPVKDN 881
Query: 856 LIAPCSTKKRKVLISESDQMQCVKKISEIASDAESSQPSSFIPITNKVKHEKPQ--ISDS 913
I +R L S Q K+I +I D + P K + +P +++
Sbjct: 882 HIVDAIPPQRMSLESTESQ-PSYKRILDIPQDLDPVDAMVMTPTFTKKQLNQPHQGVTEQ 940
Query: 914 GSRIIAQGSAPSKVDGTTYRIEAEIQSEKSKGSHSSAPP 952
+ + + +G + ++ I+ ++S ++ PP
Sbjct: 941 PPKEVQLRRMSIETEGQWHSLDLNIEDDQSFIKRTNTPP 979
>gi|307182232|gb|EFN69563.1| TFIIH basal transcription factor complex helicase subunit
[Camponotus floridanus]
Length = 759
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 207/752 (27%), Positives = 347/752 (46%), Gaps = 106/752 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ + L K + LLE P+GTGKT+ LL +A+
Sbjct: 5 VDGLIVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
+ + + ++ ++Y SRT ++ +VI+ELK
Sbjct: 60 -------MLEHPLDVTK---------------LIYCSRTVPEIEKVIEELKKLIDYYEKE 97
Query: 117 SNYRPKMV--ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADY 171
+ +PK+V +L SR+ +CIH EVS R G + C L R N+ + + +
Sbjct: 98 TKSKPKIVGLVLSSRKNMCIHPEVSREREGKIVDGRCHSLTASYVRERHNYDESTPICSF 157
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E I I+DL + G+ CPYF+ R IV Y+YL+DP
Sbjct: 158 YEGFDMEGREQIIPPGIYSIDDLKDYGKDRNWCPYFLARFTILHAQIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGL----------LTACISEAKNCI 274
+ + E KNS+++FDEAHN++ +C D+ S ++ L L ++E + +
Sbjct: 218 AETVSKELSKNSVVVFDEAHNIDNVCIDSMSVKINRKLMEKSSTNIQLLEKTVAEMRE-V 276
Query: 275 DISSTRRGQS------SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG 324
D++ + + D L + IL +L E VP N + + F K
Sbjct: 277 DVNKLKEEYNRLVEGLKDAQLQRETDVILANPILPNEVLEEVVPGNIRNAEHFVSFLKRF 336
Query: 325 -PYIYELLADLNITQET-AYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILK--- 379
Y+ L ++ QE+ A L DI A + + ++ + R I+++
Sbjct: 337 VEYLKTRLRVQHVVQESPAAFLRDIQAKVAIERKPLRFCAQRLASLLRTMEITDLTDFSP 396
Query: 380 -IIFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLE 434
I+ T S Y + + V D VL + L + C + IA++ F R +
Sbjct: 397 IILVTHLATLVSTYTHGFTIIVEPFDDKTPTVL----NPILHFSCLDSSIAVKPIFDRFQ 452
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
S+I+TSGTLSP+D + + L + + + + IV G ++S Y
Sbjct: 453 --SVIITSGTLSPLDMYPKILNFHPVIMSSFTMTLARPCLLPMIVGKGNDQVTISSKYET 510
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+ + + G +V A VPDGL+ FF SY M+ +A W + + +++ +H
Sbjct: 511 REDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLYMESVVAAWYDQG------VVDQLQRH 564
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K +E + S+ LA+ +Y+ ++ GAV +V RGKVSEG+DF H GRAV++ G
Sbjct: 565 KLLFIETQDSAETSLALINYIKACENGR--GAVLLSVARGKVSEGVDFDHHLGRAVLMFG 622
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+ ++ + EYL Q Q + ++ L+F A R Q VGR IR
Sbjct: 623 IPYVYTQSRILKARLEYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAIR 669
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ DYG ++F D+RF+ ++S++ WIQ H+
Sbjct: 670 GKTDYGIMVFADKRFSRIDKRSKLPKWIQEHL 701
>gi|321248407|ref|XP_003191119.1| CHL1 helicase [Cryptococcus gattii WM276]
gi|317457586|gb|ADV19332.1| CHL1 helicase, putative [Cryptococcus gattii WM276]
Length = 854
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 200/700 (28%), Positives = 317/700 (45%), Gaps = 103/700 (14%)
Query: 97 ILYTSRTHSQLRQVIQEL-KTS--NYRP--------------KMVILGSREQLCIHREVS 139
+ YTSRTH+QLRQ+ EL KTS NY P +V LGSR+QLCI+ +V
Sbjct: 190 VYYTSRTHTQLRQLTSELLKTSFANYDPMPESPSAEAPSHGVSLVPLGSRKQLCINEKV- 248
Query: 140 LLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-------------DIE 186
R L +KG + R N D K P DE + DIE
Sbjct: 249 -----------RALARKGGDERMNEA--CLDMQK--PAKTDEIMMLDARDMILTSVKDIE 293
Query: 187 DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
D+V +G+ CPY+ TR+ K IV PYN L+ R+ LG+ KN +++ DEAHNL
Sbjct: 294 DIVAVGKKSCVCPYYATRKAVKQSQIVTLPYNLLLQKNAREALGINLKNQVVVIDEAHNL 353
Query: 247 EGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK 306
S L+S L +S+ + + +R +S ++L+ L+ +K
Sbjct: 354 IDTILSIYSTTLTSVNLANALSQLRQYLQRFKSRL-KSKHSLWIQQVLSLLQGLIRVCDK 412
Query: 307 RIAEVPINSKELGFTKPGPYIYELLADLNITQE---TAYKLIDIVEVAAELLQEDKLQNK 363
I + +K KP + D N ++ VE+ A L+E KL K
Sbjct: 413 FIQDSKSQAKG---DKPVGMPKTEVIDANTLMRRIGGGSDQVNPVELVA-YLKESKLARK 468
Query: 364 KSTTACR-IESISNILKIIFRDKGTAHSAYYRVHVREA------DA--------NAADVL 408
S + +E S I R H++ H+ E+ DA + D+
Sbjct: 469 ISGFSEHVVEQASLKNAKIPRSATARHASITAFHIVESFLLSLVDAKDDGRILLSIDDLN 528
Query: 409 KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP----LRVE 464
K + + + NP +E + S++L GT+ P+ F Q+L + P L +
Sbjct: 529 KSEPVVVIKYILLNPSERFKEVIE-DARSVVLAGGTMEPITDFLQQLFPSIPKDRLLTLS 587
Query: 465 NPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
HVI + + +V VGP + NR+ +LG + I +VPDG+++F P
Sbjct: 588 CSHVIPKENLLTQVVSVGPRKSEFEFKFGNRNDEALLTDLGAVLQAIIGVVPDGVVVFLP 647
Query: 525 SYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM--------- 575
SY +D+ A W + G L + ER ++ EP+ S + DY
Sbjct: 648 SYAFLDKVRAFWMKS--GLLQRLGER---KQQLFYEPQTSGDVETILRDYALAITSCHAT 702
Query: 576 -AKLKDTSTSGAVFFAVCRGKVSEG----LDFADHAGRAVVITGMPFATMTDPKVRLKRE 630
A + + +GA+ FAV GK+SEG ++F+D+ GR V++ G+PFA + ++R + +
Sbjct: 703 SAAGQKSRKTGALMFAVVGGKLSEGASCCINFSDNLGRCVIMVGLPFANVGSVELRERMQ 762
Query: 631 YLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA 690
Y++ + G +E Y RAVNQ++GR IRH +DY I+ D+R+A
Sbjct: 763 YVETIPGAGQGASRE----------MYENLCMRAVNQSIGRAIRHANDYATILLVDKRYA 812
Query: 691 HPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICG 730
+P ++++ WI ++ FG V + FF+E++ G
Sbjct: 813 NPRIRNKLPKWIGEDVRIPQGFGGVARGVATFFKEKKDRG 852
>gi|390367138|ref|XP_792082.3| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Strongylocentrotus purpuratus]
Length = 792
Score = 232 bits (591), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 188/712 (26%), Positives = 318/712 (44%), Gaps = 106/712 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I Y SRTHSQL Q + E++ S Y K+V LGSR+ LCI+ V LR + N+ C +
Sbjct: 101 IFYCSRTHSQLSQFVHEVQKSPYHDDVKVVTLGSRQNLCINEAVKKLRSMTLINDRCLEM 160
Query: 154 CKKGTNRRCN--------HHSRVADYMKNNPHLGD------------EPIDIEDLVNIGR 193
K R +K PH E +D+E L +G+
Sbjct: 161 QSKKKPAAKKDDDSTTKPKRKRSKQSLKACPHFSQGQLSLYKDRVAVEVMDMEQLGKVGK 220
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADA 253
CPY+ TR +V PYN L+ RK + K +I+I DEAHNL +
Sbjct: 221 ELKACPYYGTRYAVPNAQLVVLPYNILLHKSTRKACRINLKGNIVIIDEAHNLIETICNV 280
Query: 254 ASFDLSSGLLTACISE-------------AKNCIDI-----------------------S 277
S +++ L S+ AKN + I S
Sbjct: 281 HSVEVTGAQLCRAHSQLSQYMQKFKSRLLAKNLMYIKQLLQILSSWVRQLGGRTDSAPDS 340
Query: 278 STRRGQSSDETLNPDNFAILRAL----LLKLEKRIAEVPINSKELGFTKPGPYIYELLAD 333
G S +NF + L KL++ + I+ K GF + Y+ L+
Sbjct: 341 QKLSGSGSTSVFTINNFLFETQMDNINLFKLQRYCQKSQISRKLNGFVER----YQPLS- 395
Query: 334 LNITQETAYKLIDIVEVAAELLQEDKL--QNKKSTTACRIESISNILKIIFRDKGTAHSA 391
+ + Q K + + ++ + D+ QN+ T + +++ H
Sbjct: 396 VKVHQPEKPKGSGMTQFLHQISKRDQAPSQNQPPTPDKSGDDETHVF-----SSPLMHIE 450
Query: 392 YYRVHVREADANAADVLKGK---ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPM 448
+ + + A+ + V+ K + +L + NP + + + E +II+ GT+ P+
Sbjct: 451 GFLLALTNANKDGRVVVNKKELVSQCSLRFQLLNPAVHFTDVVK-EARAIIVAGGTMQPV 509
Query: 449 DSFAQELKLNFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
+ F +L + ++ E HVI + + + GP+G L+ +Y++RD +
Sbjct: 510 EDFKHQLFVCTGVQPERILEFSCGHVIPPEHLLPISLSKGPTGLELDFTYQHRDLPQMMD 569
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
E+G +VNI+ IVP G++ FFPSY Q W+ SHG LT + R KK EPR
Sbjct: 570 EVGRILVNISNIVPGGVVCFFPSYDYEKQIYQYWE--SHGVLTRLGHR----KKIYREPR 623
Query: 563 QSSLFPLAIEDYMAKLKDTST-------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+++ + Y A ++ + +GA+ F V GK+SEG++F+D+ GR +V+ G+
Sbjct: 624 KANQVDQVLGQYSATIEKACSGCTLSGLNGAMLFCVVGGKMSEGINFSDNLGRCIVMVGL 683
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+A + P+++ K +YL+ G +G+ Y+ +AVNQ++GR IRH
Sbjct: 684 PYANIKSPELKEKMDYLNANMPQINGRS--------AGQVHYDNLCMKAVNQSIGRAIRH 735
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+ DY +++ D R+ PS +S++ WI + S+FG ++ +FF ++R
Sbjct: 736 KGDYASMLLLDHRYTRPSIRSKLPAWISERLLVASRFGPAFASINKFFVDKR 787
>gi|395324700|gb|EJF57135.1| DNA repair helicase [Dichomitus squalens LYAD-421 SS1]
Length = 879
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 192/701 (27%), Positives = 305/701 (43%), Gaps = 85/701 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYR------------------------------------ 120
I Y SRTHSQL QV+ EL+ N +
Sbjct: 193 IYYASRTHSQLAQVLHELEKLNIKLNIAVPSAPSLPSVRRPLDTSRAEKRSVESLENENE 252
Query: 121 -------PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV---AD 170
P+ V LGSR+QLCI+ + R + ACR + + +RC H V A
Sbjct: 253 DSTMGTGPRAVSLGSRKQLCINERLKE-RAGDLDEACRQMLGEKGKKRCPHLPSVEEEAR 311
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
+ + P DIEDL IG+ CPYF +R +V PYN L+ R+ LG
Sbjct: 312 MLDLRDQILATPKDIEDLYQIGQAADTCPYFGSRRAIPKAQLVLLPYNLLLQKTAREALG 371
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLN 290
++ + ++I DEAHNL ++ L L T + + I +S R S+ L+
Sbjct: 372 IDLTDQVVIIDEAHNLTSTLLSLSATRLP--LRTLSAARHQLSIYLSRFRNRLSTVHALH 429
Query: 291 PDNFAILRALLLKLEKRIAEVPINSKELGFTK--PGPYIY-----ELLADLNITQETAYK 343
+ L K + E E G K GP + EL+ L E
Sbjct: 430 LKRLTNVLEGLSKYAEDWREAQAKPAEDGKVKGRAGPEVEVITSGELMTRLGRKAEG--- 486
Query: 344 LIDIVEVAAELLQEDKLQNKKSTTACR-IESISNILKIIFRDKGTAHSAYYRVHVREA-- 400
++++E+ + L+E K+ K S + + +E + + + +H E+
Sbjct: 487 -VNLLEIE-KYLRESKIARKISGYSVKELEKAAGQDTVKLAKLARLANTTPPLHAVESFI 544
Query: 401 DANAADVLKGKASRTL-------SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ 453
A A G+ + +L + NP QE S++L GT+SPM
Sbjct: 545 VALTASSDDGRVTFSLVDGSVEIKYQHLNPATHFQEVVD-AARSVVLAGGTMSPMSDVVN 603
Query: 454 ELKLNFP----LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIV 509
+L + P H+I + + ++ GP G L ++ R ELG ++
Sbjct: 604 QLFSSLPSERLTTFSCGHIIPTSNLQTLVLKKGPRGGELTFKFQQRGDDSLIAELGQILL 663
Query: 510 NIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPL 569
N +VP G+++F PSY ++ WK + + E++ KK EP++S
Sbjct: 664 NFTNVVPGGMVVFVPSYGFLNVITERWKASG------MLEKLSAKKKVFSEPQESKQVEA 717
Query: 570 AIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
+ DY A++KD+S GA+ FAV K+SEGL+F D RAV+I G+PFA + P++R +
Sbjct: 718 VLRDYAAEIKDSSRRGALLFAVVGAKLSEGLNFTDDLARAVIIVGLPFANLGSPELRERM 777
Query: 630 EYLDLQAQSQ---GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCD 686
Y+ Q Q G +T + +G + Y AVNQ++GR IRHR D+ A++ D
Sbjct: 778 NYVTRLEQRQLASGARKAKTSSTKDAGTELYENMCMNAVNQSIGRAIRHRGDWAALVLVD 837
Query: 687 ERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
R+A P + ++ W++ FG + L RF+RE++
Sbjct: 838 CRYASPRIRGKLPKWLEAGTVVTESFGQAMKELGRFYREKK 878
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF+ YD QL M V ++++K A++ESPTGTGKTL LLCA+L W
Sbjct: 14 FPFKPYDIQLDLMRHVFSAIEDKKVAIMESPTGTGKTLSLLCASLTW 60
>gi|400603430|gb|EJP71028.1| DNA repair helicase [Beauveria bassiana ARSEF 2860]
Length = 868
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 196/697 (28%), Positives = 320/697 (45%), Gaps = 104/697 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP------------------KMVILGSREQLCIHREV 138
I YTSRTHSQL Q I EL+ + K++ L SR++LCI+ V
Sbjct: 210 IYYTSRTHSQLSQFITELRRPKFPASLPEGLSSADAKAQDELVKLLPLSSRQKLCINPSV 269
Query: 139 SLLRG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGR 193
S L+ A N+ C L + ++R+C+ R + + D + DIEDL +G+
Sbjct: 270 SRLKSVQAINDRCAELQQPKSSRKCDFVPR-EELLAQTHEFRDTALATIPDIEDLHQLGK 328
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADA 253
+ CPY+ +R +IV PY L+ R LG++ + +++I DEAHN+ ++
Sbjct: 329 SLQVCPYYASRTALPGAEIVTLPYPLLLQKSARDALGIKLEGNVVIVDEAHNIMDAVSNV 388
Query: 254 ASFDLSSGLLTACISEAKNCIDISSTRRGQS----------------------SDETLNP 291
+ DL L C + + I + G+ + TLN
Sbjct: 389 YAADLKLSDLRRC----REMLGIYVRKFGKKLKGVNRVNVGRVGRVVEGLSEYMNTTLNA 444
Query: 292 --DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVE 349
DN I+ A L K I + IN EL YI+E + AYK I+
Sbjct: 445 KHDN-GIVDANELTRPKGIDQ--INMFELI-----QYIHE--------SKLAYK-IEGYA 487
Query: 350 VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK 409
+ QED Q+ ++ + + + L + T S+ R+ ++ ADV
Sbjct: 488 SHVDSKQEDGKQHAPKSSTPVLHTFVSFLVAL-----TNLSSEGRIFYQKLSGAQADV-- 540
Query: 410 GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP--- 466
LS+ +P A + ++IL GT+SP + + L FP ++
Sbjct: 541 -----QLSYLLLSPTYAFSSIAS-SARAVILAGGTMSPFEDYKDHL---FPALDQSKITT 591
Query: 467 ----HVITSKQIWAGIVPVGPSGYL-LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
HVI S + + +G SY+ R E +LG I+N+ IVPDG+++
Sbjct: 592 LSCGHVIPSTNLCVRTLAASRAGGPPFEFSYQRRGDEEMIGQLGLAILNMCSIVPDGVVV 651
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM-AKLKD 580
FFPSY +DQ + WK G+ + WER+ K KK +++ + + ++ Y A L
Sbjct: 652 FFPSYGYLDQVVEVWKKKRAGDAQSTWERL-KSKKTILQESKGASSDEVLQKYSEAILGS 710
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS-- 638
+ GA+ +V GK+SEG++F+D GR V + G+P+ + P+ R K EY++ ++
Sbjct: 711 QAGGGALLLSVVGGKMSEGINFSDRLGRLVAVVGLPYPNVASPEWRAKMEYIESSTRTRL 770
Query: 639 -QGGEYKETKLSFLSGE---DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
+ G T+ S + + D+Y RAVNQ++GR IRHR DY AI+ D+R+
Sbjct: 771 LERGGITPTEASSRAKQVARDFYENSCMRAVNQSIGRAIRHRGDYAAIVLLDKRYTSERI 830
Query: 695 KSQISLWIQPHIQCYSK---FGDVVYTLTRFFREERI 728
+ ++ WIQ +Q S+ G ++ L FFR +++
Sbjct: 831 RKKLPGWIQGGLQMDSQEKGLGGIMGALASFFRGKKV 867
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCN--ALLESPTGTGKTLCLLCATLAW 59
I ID PF YD Q +M V Q L+ +LESPTGTGK+L L+CA+L W
Sbjct: 14 ITRIDFHHPFTPYDVQEKFMRTVYQVLETGEGQVGILESPTGTGKSLSLICASLTW 69
>gi|317032533|ref|XP_001395061.2| ATP-dependent RNA helicase CHL1 [Aspergillus niger CBS 513.88]
Length = 834
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 195/665 (29%), Positives = 301/665 (45%), Gaps = 56/665 (8%)
Query: 87 SQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLR-GSA 145
S D+ I Y SRTHSQL Q E + R K V LGSR+ LCI+ VS L +A
Sbjct: 193 SDDADNDEVKIFYCSRTHSQLTQFAGEEELEE-RVKHVTLGSRKNLCINPRVSSLENATA 251
Query: 146 QNNACRFLCKKGTN--RRCNHHSRVAD---YMKNNPHLGDEPIDIEDLVNIGRTFGPCPY 200
N C L + N RC D ++ H DIEDL +G+ G CPY
Sbjct: 252 INERCLDLQQPNVNPQHRCPFLPSKEDERQVLQFRDHALSTVKDIEDLGKLGKKIGICPY 311
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSS 260
+ +R + K +IV PY L+ R+ L K ++I DEAHNL ++ S ++
Sbjct: 312 YASRSVVKDSEIVTLPYPLLLQRSAREALNSSVKGHVIIIDEAHNLMDAISNIHSVTVTL 371
Query: 261 GLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGF 320
L +S+ T G+ L N + + A +++L IA + E G
Sbjct: 372 SQLQTSLSQL--------TIYGRKFKTRLKGKNRSYV-AQVIRLLSSIAAHLRSLLESGK 422
Query: 321 TKPGP-YIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK-------KSTTACRIE 372
GP I EL++ + Q YKL + LQE KL K + +
Sbjct: 423 APEGPVLISELMSGKGVDQINPYKL-------SRYLQESKLARKVDGYVEFTRDPSDKQA 475
Query: 373 SISNILKIIFRDKGTAHSAYYRVHVREADANAADVL---KGKASRTLSWWCFNPGIAMQE 429
S S + ++F +G S + +A L K + L + +P +E
Sbjct: 476 SRSPTVPVLFHIQGFLLSLM--------NPSAEGRLFYSKEQGDIQLKYMLLDPTNQFRE 527
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPL-RVEN---PHVITSKQIWAGIVPVGPSG 485
+ +IIL GT+SPM + L P R++ HVI + + A + G G
Sbjct: 528 LVE-DARAIILAGGTMSPMTDYMNHLFSYVPASRLDTFSYGHVIPPENLIAHTLVRGVQG 586
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
+ +Y RDS + +LG TI + ++PDG++ FFPSY + + + WK G
Sbjct: 587 SEFDFTYDARDSEKMIMDLGRTIATLCHVIPDGVVAFFPSYDYLGRVLNIWKKPMLGEQG 646
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVFFAVCRGKVSEGLDFA 603
+ KKP++ +S + E+ + +T S GA+ +V GK+SEG++F+
Sbjct: 647 QTVYNLIGQKKPILS--ESRDMTVTTEELLHTYANTVDSGRGALLLSVVGGKLSEGINFS 704
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QSQGGEYKETKLSFLSGEDWYNQQA 661
D GR V+I G+PF + + K +Y++ + Q+ G E + +G D+Y
Sbjct: 705 DKLGRGVLIVGLPFPNIRSAVWQAKIQYIEQKTHQQATGSEASRQLAAKAAGRDFYENSC 764
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS---KFGDVVYT 718
RAVNQ +GR IRHR+DY AI+ D R+ P ++++ WI+ + S G V +
Sbjct: 765 MRAVNQCIGRAIRHRNDYAAIVLVDRRYEKPGIQAKLPAWIKQSMVGSSVQRPAGATVQS 824
Query: 719 LTRFF 723
L +FF
Sbjct: 825 LAKFF 829
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D P+ YD QL M + L+ A+ ESPTGTGK+L L+C +L W
Sbjct: 7 DFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGTGKSLSLICGSLTW 56
>gi|402588914|gb|EJW82847.1| hypothetical protein WUBG_06243, partial [Wuchereria bancrofti]
Length = 550
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 180/314 (57%), Gaps = 6/314 (1%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
TL++WCF+P +AM V S+I+TSGTLSP+DSF L ++FP+ +EN H QI
Sbjct: 11 TLNYWCFSPSVAMWYLHSGGVRSVIVTSGTLSPLDSFINNLGISFPVTLENQHAANVDQI 70
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+ SG L ++ R S Y +G IV +I+PDG+L+FF SY M+ C+
Sbjct: 71 LCARIRSSQSGIDLCGTFHKRSSSAYVFGIGEVIVRACQIIPDGILVFFSSYVTMNTCLK 130
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
WK G + IW+ I +K+ VEP+ + + ++++ S +GA+ FAVCR
Sbjct: 131 FWKTLKFGPM-FIWKTILAYKEAFVEPKSKLELKAVLLQFRQQVREGS-NGAILFAVCRA 188
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF D R V++ G+P+A DP++ LKR++L Q + K+ +S +
Sbjct: 189 KVSEGIDFLDSESRGVIVIGIPYAPTMDPRIELKRQFLTKQRMAVA---KQELRKNVSAD 245
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
+WY +A R+VNQ++GRV+RH++D+G +I D RF S K + W++ ++ Y D
Sbjct: 246 EWYQVEAIRSVNQSIGRVLRHKNDFGVVILADSRFCSMSSK-RFPSWMRECLKNYQDISD 304
Query: 715 VVYTLTRFFREERI 728
+FF++ I
Sbjct: 305 FEDECKQFFKKRNI 318
>gi|296417607|ref|XP_002838444.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634383|emb|CAZ82635.1| unnamed protein product [Tuber melanosporum]
Length = 807
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 203/708 (28%), Positives = 315/708 (44%), Gaps = 107/708 (15%)
Query: 74 NNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP------------ 121
++ G+Q S+ GD+ P I Y SRTHSQL Q I EL+ + P
Sbjct: 145 GDEDGGAQGSL----GGDALSPAIFYCSRTHSQLTQFINELRRVKFPPSSPGGEGSALEE 200
Query: 122 --KMVILGSREQLCIHREVSLLRG-SAQNNACRFLCKKGTNR--RC------NHHSRVAD 170
K + LGSR+ LCI+ +V+ L +A N C L + G + RC + V D
Sbjct: 201 EVKHLSLGSRKNLCINPKVTKLGNPTAINERCLELQRSGASEASRCEFLPGRDDQVAVRD 260
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
+ H + DIEDL ++GR G CPY+ +R K +IV PY L+ R+ L
Sbjct: 261 F---RDHTLAKIRDIEDLASLGRKMGICPYYASRPTIKPSEIVTLPYPLLLQKSAREALD 317
Query: 231 VEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTR---RGQSSDE 287
+ K I+I DEAHNL I A ++ + ++ L A + +K+ +DI R R + ++
Sbjct: 318 LSLKGHIVIVDEAHNL--INAISSIYSITVSL--AQLQRSKSQLDIYLARFKNRLKGKNK 373
Query: 288 TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLID- 346
I+ +L LE E+ SKE G PG +LLA I Q YKL
Sbjct: 374 VYVMQTLRIIASLASYLE----EISKKSKE-GVIAPG----DLLAMQGIDQVNFYKLQTY 424
Query: 347 -------------IVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKG-----TA 388
IV A+ +++KL NK + S + ++ +G T
Sbjct: 425 LNESKLARKVEGYIVHKQAKEQEKNKLPNKPGGAKALQPTAS--IPVLTHIQGFLLALTN 482
Query: 389 HSAYYRV-HVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSP 447
SA ++ H + D N L + +P QE E ++IL GT+ P
Sbjct: 483 PSAEGKLFHGKTEDKN---------DTCLRYMLLDPAHHFQEIVE-EARAVILAGGTMEP 532
Query: 448 MDSFAQELKLNFPLR----VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQE 503
M+ + L P + HVI + + A V GP G ++ R +E
Sbjct: 533 MNDYTNHLFPYLPKEKIRTLSCGHVIPKENLTALPVTKGPGGREFEFTFEKRMQPAMIEE 592
Query: 504 LGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN----TSHGNLTTIWERICKHKKPVV 559
LG IVN+ +++P G++ FFPSY ++ ++ W+ S+ ++WER+ K
Sbjct: 593 LGRAIVNLCQVIPHGVVCFFPSYAYLEFVVSQWRKKPTPASNTAAKSLWERLEDRKTVFR 652
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
E S + +Y + S G + +V GK+SEG++F D+ GR +++ G+PF
Sbjct: 653 ESSDGSSVEEVLREYAQAI--DSGKGGLLLSVVGGKMSEGINFNDNLGRGIIMVGLPFPN 710
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ R K E+ + A G ++Y RAVNQ++GR IRHR DY
Sbjct: 711 SNTAEWRAKLEHAEKAA----------------GREFYENACMRAVNQSIGRAIRHREDY 754
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHI---QCYSKFGDVVYTLTRFFR 724
I D R++ S++ WIQ + FG+V+ +RFF+
Sbjct: 755 AVIALFDRRYSTDRIASKLPKWIQNGLVRGPVDKVFGEVMVITSRFFK 802
>gi|426347270|ref|XP_004041278.1| PREDICTED: Fanconi anemia group J protein-like [Gorilla gorilla
gorilla]
Length = 469
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 196/329 (59%), Gaps = 21/329 (6%)
Query: 412 ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITS 471
A L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F +++E H+I +
Sbjct: 60 AVHVLNFWCLNPAVAFSDING-KVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHIIKN 118
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
Q+W G + GP G L ++++N ++ E++ E+G ++++ + V G+L F PSY L+++
Sbjct: 119 SQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEK 178
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-DTSTSGAVF 588
W +T +W + K +VEP+ + + F ++ Y +K GA+
Sbjct: 179 LKERWLSTG------LWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKYKGEKDGALL 232
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKL 648
AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++ +G
Sbjct: 233 VAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRG-------- 284
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLWIQPHI 706
L G WY QA RA+NQA+GR IRHR+D+GA+I D+RF +PSR S +S W++ I
Sbjct: 285 -LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQI 343
Query: 707 QCYSKFGDVVYTLTRFFREERICGSTNLK 735
Q +S F + +L F ++ + + ++K
Sbjct: 344 QHHSTFESALESLAEFSKKHQKVLNVSIK 372
>gi|401826548|ref|XP_003887367.1| Rad3-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
gi|395459885|gb|AFM98386.1| Rad3-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
Length = 742
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 216/815 (26%), Positives = 355/815 (43%), Gaps = 148/815 (18%)
Query: 5 KIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
+I + V FP+++ Y QL YM ++ +SL NK + L+E P+GTGKT+ LL T++++ +
Sbjct: 4 QIDEVLVYFPYDSVYPEQLKYMREIKRSLDNKGHCLIEMPSGTGKTVALLSMTISYQLYM 63
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-----TSN 118
+++ K I+Y SRT ++ + ++EL
Sbjct: 64 ----------------------KAKNAHFK---IVYCSRTVQEVEKALKELDRVVEYIKK 98
Query: 119 YRPKMVI---LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNN 175
+RP + L R+ LCI+ S + + ACR L + +C D+ +N
Sbjct: 99 HRPIEFLGLGLTGRKNLCINEAAS--KSFNVDVACRRLINRLVESKC-------DFYENL 149
Query: 176 PHLGDEPIDIED---LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVE 232
+ P+ + D L +G G CPY++ R D + PYNYLIDP + E
Sbjct: 150 NSFNEVPVAVYDFSQLKEMGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRIYAIVSKE 209
Query: 233 WK-NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNP 291
+S++IFDEAHN++ C + S ++ +L KN ++ +RG + +E++
Sbjct: 210 LGPDSVVIFDEAHNIDSHCIEVLSIEIKRNILEGATRAIKN-LECLLKQRGPAGEESM-- 266
Query: 292 DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA 351
L K+++++ E P+ F G YE + ++ I ++
Sbjct: 267 --------LYEKMKEKVGE-PVADSIPYFYATGEGNYEFIPG---NLRNSFHFISALKRI 314
Query: 352 AEL---------------------LQEDKLQNKKSTTAC--RIESISNILKIIFRDKG-- 386
E ++E KK+ C R+ +S L + D G
Sbjct: 315 TEFFKTKLKTTHLTTESTESFCKSIKELSFVEKKALRFCSQRLGMLSQSLGVDDEDMGHL 374
Query: 387 ----------TAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEV 435
+ +S + V D+ A+ V + TL C + IAM F R
Sbjct: 375 KTVADFSTMVSMYSKGFVVIFEPFDSQASTVF----NPTLRLACLDSSIAMSSVFGRFR- 429
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVG------------- 482
++I+TSGT+SP+D + + L VE + I I+ G
Sbjct: 430 -NVIITSGTMSPIDMYPKILNFVSSRTVEIGATLDRNSISPLIITKGNDQMTLRALSDDV 488
Query: 483 -----PSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
+G +L +S+ R + G+ +V ++++VPDG++ FFPSY M++ ++ W
Sbjct: 489 EATDTSNGDVLTTSFSLRSDPSVVRNYGHLMVELSKVVPDGIVCFFPSYMYMEEIVSLWA 548
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
T+ I I K+K VE +A+ +Y K + G + F+V RGKVS
Sbjct: 549 ETN------IINEISKNKLVFVETPDGRETEIALSNY--KRACDNGRGGMLFSVARGKVS 600
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EG+DF D GR VV+ G+PF VRLK+ L+ + EY D+
Sbjct: 601 EGVDFEDGYGRCVVMLGVPFQYT--ESVRLKKRLDFLREEYGIKEY-----------DFL 647
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI---QCYSKFGD 714
A R Q +GRV+R+++DYG +I DERF +KS++ WIQ I C
Sbjct: 648 TFDAMRHAAQCLGRVLRNKNDYGLMILADERFERNDKKSKLPKWIQNCIDGGNCNLSVDM 707
Query: 715 VVYTLTRFFRE--ERICGSTNLKLIKTEVSGDVRE 747
+ RFFRE + G+ N L + +V V E
Sbjct: 708 ALSIARRFFREMAQECTGAGNSLLSEKDVENFVFE 742
>gi|326430720|gb|EGD76290.1| hypothetical protein PTSG_00993 [Salpingoeca sp. ATCC 50818]
Length = 871
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 189/673 (28%), Positives = 298/673 (44%), Gaps = 75/673 (11%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRG-SAQNNAC 150
++ I + SRTHSQL Q + E+K S + ++ LGSR+ LC + V+ L A N C
Sbjct: 236 RIRKIFFCSRTHSQLAQFVSEVKNSPFSDVRLTALGSRQNLCTNPRVNKLSSLHAINEKC 295
Query: 151 RFLCKKGTNRRCNHHSRVADYMKNNPHLG------------DEPIDIEDLVNIGRTFGPC 198
L K T + + A +K P L P DIE+ +G G C
Sbjct: 296 LDLQK--TKNEIDPKTGKAVKVKKCPMLNPRSMNVTSNIILGSPQDIEEAAVVGERLGAC 353
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
Y+ +R+ + ++V PYN L+ R+ +G++ K++I+I DEAHNL A S L
Sbjct: 354 AYYASRQAVEFAELVLLPYNMLLHKPTREAVGLDLKDNIVIVDEAHNLVETIAALHSAKL 413
Query: 259 SSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA----EVPIN 314
+ L + +D R L P + +R LL L+ + V
Sbjct: 414 ARLELEQAHAALSQYMDKFKRR--------LTPKHLMYIRQLLFVLKSWLTFLRKPVADG 465
Query: 315 SKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAA--------------ELLQEDKL 360
K +++E D +KL+ E + +
Sbjct: 466 EKSEFLLSVNDFLFETKTD----HMHFFKLLRYCEKSELHRKLLGYTQRHLPSVFDSGNG 521
Query: 361 QNKKSTTACRIESISNILKI-IFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWW 419
+S+ A R + IS + + F + T R+ VR + +A +L +
Sbjct: 522 DVGESSGALRSKHISPLRGVQAFIESLTHADEDGRIVVRRSGRDA----------SLQFM 571
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL--NFPLRVEN---PHVITSKQI 474
NP I +E L+ ++ + GT+ M F Q L+ L+V HV+ I
Sbjct: 572 LLNPAIYFEEVL-LKARAVAVVGGTMGSMSEFVQHLQTPKTRALKVSTFSCGHVVNGNNI 630
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
A GP+ ++ NR + + LG +VN+ R+VP G+++FFPSY D
Sbjct: 631 IALAATHGPTNEPFRFTFANRKNKAMVEGLGRLLVNVCRVVPAGVVVFFPSYDTEDFIYQ 690
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
WK + + + + K+ V EPR + + +Y ++ G + FAV G
Sbjct: 691 HWKACG------VLDSLQRLKQVVREPRAAGKTDECLTEYSNAVQ--QGRGGLLFAVVGG 742
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
K+SEG++F D GR VV+ G+P+ P ++ K YLD +A S G S GE
Sbjct: 743 KLSEGINFKDDLGRCVVMVGLPYPNRHSPALQEKMAYLDKRAGS--GARNANGQS--PGE 798
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
+Y +AVNQ++GR IRHR+DY AI+ D+R+A P SQ+ W+QP+ K G
Sbjct: 799 AYYENLCMKAVNQSIGRAIRHRNDYAAILLVDDRYARPRIASQLPEWMQPYHTTVDKMGG 858
Query: 715 VVYTLTRFFREER 727
VV L+ FFR+ +
Sbjct: 859 VVRHLSTFFRKRK 871
>gi|330930952|ref|XP_003303208.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
gi|311320914|gb|EFQ88691.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
Length = 865
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 198/729 (27%), Positives = 321/729 (44%), Gaps = 84/729 (11%)
Query: 60 RKSLGSF--STLGSQVNNQISGSQSSVNSSQSGDSKLPT---ILYTSRTHSQLRQVIQEL 114
R G+F S L ++ ++ SVN + D + P I + SRTHSQL Q EL
Sbjct: 160 RAKAGTFDESGLSAETQALMASLGYSVNVPKDDDGETPDETKIFFCSRTHSQLTQFSSEL 219
Query: 115 KTSNYRP--------------------KMVILGSREQLCIHREVSLL-RGSAQNNACRFL 153
P K + LGSR+ LCI+ +V+ L +A N C L
Sbjct: 220 GRVKMPPAIAPDDAENGGGAKSLVEDVKHLTLGSRKNLCINSKVNRLGSATAINEQCLEL 279
Query: 154 CKKGT-NRRCNHH-SRVADYMKNN--PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKT 209
+ RC H ++ ++ + N+ H + DIEDL ++G+ G CPY+ +R K
Sbjct: 280 QQSSVAETRCPHMPTKESEPLINDFRDHALAKIRDIEDLGSLGKKLGVCPYYASRPATKY 339
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
+IV PY L+ R+ LG+ K+ I+I DEAHNL DA + S + + +
Sbjct: 340 CEIVTLPYPLLLQRSAREALGISLKDHIVIIDEAHNL----MDAIAGIYSVSVTLEQVQQ 395
Query: 270 AKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYE 329
A+ + + Q L N + + L+ + + + G + +
Sbjct: 396 ARTQLTVYL----QKFRNKLKGKNRVYVAQTVRILDSIVGYLQTIHDKPGMSDGLVDMVS 451
Query: 330 LLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKII----FRDK 385
+++ + Q YKL LQE +L K +E +N + K
Sbjct: 452 IMSGKGVDQINIYKL-------NTYLQESRLARKVDGYTAYVEETTNEKAMTSTKQVGKK 504
Query: 386 GTAHSAYYRVHVRE---ADANAADVLKGKASR------TLSWWCFNPGIAMQEFSRLEVG 436
G H+ +HV+ + N + + SR TL + +P +E E
Sbjct: 505 GPRHNVPVLMHVQAFLLSLMNPSTEGRFFYSREEDTGMTLRYMLLDPTFHFKEIVE-EAR 563
Query: 437 SIILTSGTLSPMDSFAQELKLNF--PLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSS 491
++IL GT+SPM + Q L L++ P ++ HVI + A V G + +
Sbjct: 564 AVILAGGTMSPMSDYEQHL-LSYLEPSKIMTLSCGHVIPPSNLLAVPVMRTSGGVEFDFT 622
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH-GNLTTIWER 550
+ NR+ + +LG I+N ++ +PDG+++FFPSY +D C+A WK + T W+
Sbjct: 623 FENRNKEKTMIDLGTAILNFSQHIPDGVVVFFPSYSYLDTCVAAWKRIKQSASKATFWDN 682
Query: 551 ICKHKKPVVEPRQ----SSLFPLA--------IEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
+ K +E R S P + + Y A + + GA+ FAV G +SE
Sbjct: 683 FTQSKPVFLEQRSQQQASDQVPASKDVAVASVLSTYSAAIASGNGRGALLFAVIGGTLSE 742
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G++F+D GR VV+ G+PF + + K +Y+ + GG+ K + D+Y
Sbjct: 743 GINFSDALGRGVVVVGLPFPNAQSAEWKAKMQYIAAKTAKNGGDGKA------AARDFYE 796
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYT 718
RAVNQ VGR IRH+ DY AI+ D R+A + ++ WI+ + DV
Sbjct: 797 NACMRAVNQCVGRAIRHKGDYAAILMLDRRYAGRRIQDKLPKWIRASLTTGLGVRDVEGR 856
Query: 719 LTRFFREER 727
L FF +++
Sbjct: 857 LDEFFMDKK 865
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D P+ YD Q +M V + L+++ + ESPTGTGK+L L+C +L W
Sbjct: 9 DFHHPYTPYDIQNEFMGAVYKCLEDRKVGIFESPTGTGKSLSLICGSLTW 58
>gi|71018229|ref|XP_759345.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
gi|46099195|gb|EAK84428.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
Length = 1496
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 193/691 (27%), Positives = 310/691 (44%), Gaps = 112/691 (16%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRPKMVI-----------LGSREQLCIHREVSLL- 141
LP ++Y SRTHSQL Q + ELK +++ +I LGSR+Q+CI+ +V +
Sbjct: 242 LPRVIYASRTHSQLSQFVAELKKTSFGQVDIIHAETLPIRTIPLGSRKQMCINEDVQRIG 301
Query: 142 --RGS-AQNNACRFLCKKGTNR-RCNH--------HSRVADYMKNNPHLGDEPIDIEDLV 189
+GS A N C L K T + +C+ SR+ ++ E DIEDLV
Sbjct: 302 RNKGSEAMNERCIELIKGKTGKTKCSSLPPFDQTGRSRILEFRDAAMA---EVGDIEDLV 358
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGI 249
+G+ CPYF R K +++ PYN L+ R LG+ + I++ DEAHNL
Sbjct: 359 QLGKQTNTCPYFAARSSAKQAELITLPYNLLLQKDARNALGISLEGCIVLVDEAHNLIDT 418
Query: 250 CADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA 309
S + S + + +D + R S+++ L +L ++ K+ A
Sbjct: 419 ILSTHSVTIDSQQIAQASEQIDTYLDKFALRLKGSNEQNLRKVR-KVLSSMSAFFSKKAA 477
Query: 310 EVPINSKELGFTKPGPYIYELLADLN----ITQETAYKLIDIV----------------E 349
E N+ EL + + L +L+ +T ET K I +
Sbjct: 478 EGKTNA-ELVLSA-ADLVRSLTGNLDQINLVTLETWLKETQIARKISGYADKHSKMAVQQ 535
Query: 350 VAAELLQEDKLQNKKS------------------TTACRIESISNILKIIFRDKGTAHSA 391
AA + Q + + KS + I S+ I I +
Sbjct: 536 AAASVNQHNGTRTNKSRHPPKLLLENASPDSIRSASQSAISSMHAIETFILSLANRSEDG 595
Query: 392 YYRVHVREADANAAD-VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDS 450
RV + A +A + V++ K + NP + E S+IL GT+ PM
Sbjct: 596 --RVVLSSATNSAGENVVRAK------YQLLNPSHVFRSLVD-EARSVILAGGTMEPMSD 646
Query: 451 FAQELKLNF--PLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELG 505
F Q+L L F P R+ H+I + + ++ P G + +RD++E ELG
Sbjct: 647 FRQQL-LPFVPPDRLVTFSCGHIIPASNLMVSVLSASPKGLPFEFKFDSRDNVELIDELG 705
Query: 506 NTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS 565
T+VN+ IVP GL++F PSY +D+ +A WK+ + G L +R+ KK +EP+ +
Sbjct: 706 RTLVNVCNIVPAGLVVFVPSYAFLDKLMARWKDAASGGL---LQRLGSKKKIFIEPKTTM 762
Query: 566 LFPLAIEDYMAKLK------DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
+ +Y A ++ S+ GA+ FAV K+SEG++F+D+ R VV+ GMPFA
Sbjct: 763 EVDKVLGEYTAAIRAKDVKTGVSSGGAIMFAVVGAKLSEGINFSDNLARGVVMVGMPFAN 822
Query: 620 MTDPKVRLKREY---LDLQAQSQG---------------GEY-KETKLSFLSGEDWYNQQ 660
M P++ + +Y L ++ +S +Y T L L G + Y
Sbjct: 823 MHSPELAERMKYVRELAIKHESTACVTASQKPSDPQRVLTKYMSNTLLPPLQGHELYINL 882
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAH 691
+AVNQ++GR +RH++D+ A+I D A
Sbjct: 883 CMKAVNQSIGRAVRHQNDFAALILLDRSTAQ 913
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 13 FPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+ EAY QL M KV ++++ L ESPTGTGK+L L+CA W + T+G+
Sbjct: 27 FPYAEAYSIQLDLMRKVFSTIEDGKVGLFESPTGTGKSLSLICAAFTWLRQNAQRHTIGT 86
Query: 72 QVNN-QISGSQSSVNSSQSGD 91
N+ + GS + Q D
Sbjct: 87 STNDGETHGSNHGPATQQEPD 107
>gi|340710930|ref|XP_003394036.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Bombus terrestris]
Length = 759
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 201/752 (26%), Positives = 346/752 (46%), Gaps = 106/752 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ + L K + LLE P+GTGKT+ LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
+ N + ++ ++Y SRT ++ +VI+ELK
Sbjct: 60 -------MLENPLDVTK---------------LIYCSRTVPEIEKVIEELKKLMDYYEKE 97
Query: 117 SNYRPKMV--ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADY 171
+ +PK+V +L SR+ +CIH EVS R G + C L R N+ + + ++
Sbjct: 98 TGSKPKIVGLVLSSRKNMCIHPEVSREREGKIVDGRCHSLTASYVRERHNYDESTPICNF 157
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E I+DL GR CPYF+ R IV Y+YL+DP
Sbjct: 158 YEGFDMEGKEQFMPPGIYSIDDLKEYGRDRNWCPYFLARFTILHAQIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSS----------GLLTACISEAKNCI 274
+ + E K+S+++FDEAHN++ +C D+ S ++ LL ++E +
Sbjct: 218 AETVSKELSKSSVVVFDEAHNIDNVCIDSMSVKINRRTLEKSSANIQLLEKTVAEMRED- 276
Query: 275 DISSTRRGQS------SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG 324
D++ + D + + IL +L E VP N + +GF +
Sbjct: 277 DVNKLKEEYERLVEGLKDAHVARETDIILANPVLPDEILQEVVPGNIRNAEHFVGFLRRF 336
Query: 325 -PYIYELLADLNITQETAYKLIDIVEVAAELLQED-KLQNKKSTTACRIESISNILK--- 379
Y+ L ++ QE+ + V+ + ++ + ++ + R I+++
Sbjct: 337 VEYLKTRLRVQHVVQESPAAFLRDVQTKVSIERKPLRFCAERLASLLRTMEITDLTDFSP 396
Query: 380 -IIFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLE 434
I+ T S Y + + V D +VL + L + C + IA++ F R +
Sbjct: 397 AILVTHLATLVSTYTKGFTIIVEPFDDKTPNVL----NPILHFVCLDSSIAIKPIFDRFQ 452
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
S+++TSGTLSP+D + + L + + + + IV G ++S Y
Sbjct: 453 --SVVITSGTLSPLDMYPKILNFHPVIMSSFTMTLARPCLLPMIVAKGNDQVAISSKYET 510
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+ + + G +V A VPDGL+ FF SY M+ +A W + + +++ +H
Sbjct: 511 REDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLYMESVVAAWYDQG------VVDQLQRH 564
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K +E + S+ LA+ +Y+ ++ GAV +V RGKVSEG+DF H GRAV++ G
Sbjct: 565 KLLFIETQDSAETSLALINYIRACENGR--GAVLLSVARGKVSEGVDFDHHLGRAVLMFG 622
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+ ++ + EYL Q Q + ++ L+F A R Q VGR IR
Sbjct: 623 IPYVYTQSRILKARLEYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAIR 669
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ DYG ++F D+RF+ ++S++ WIQ H+
Sbjct: 670 GKTDYGIMVFADKRFSRMDKRSKLPKWIQEHL 701
>gi|350400679|ref|XP_003485920.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Bombus impatiens]
Length = 777
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 201/752 (26%), Positives = 346/752 (46%), Gaps = 106/752 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ + L K + LLE P+GTGKT+ LL +A+
Sbjct: 23 VDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAY----- 77
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
+ N + ++ ++Y SRT ++ +VI+ELK
Sbjct: 78 -------MLENPLDVTK---------------LIYCSRTVPEIEKVIEELKKLMDYYEKE 115
Query: 117 SNYRPKMV--ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADY 171
+ +PK+V +L SR+ +CIH EVS R G + C L R N+ + + ++
Sbjct: 116 TESKPKIVGLVLSSRKNMCIHPEVSREREGKIVDGRCHSLTASYVRERHNYDESTPICNF 175
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E I+DL GR CPYF+ R IV Y+YL+DP
Sbjct: 176 YEGFDMEGKEQFMPPGIYSIDDLKEYGRDRNWCPYFLARFTILHAQIVVYSYHYLLDPKI 235
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSS----------GLLTACISEAKNCI 274
+ + E K+S+++FDEAHN++ +C D+ S ++ LL ++E +
Sbjct: 236 AETVSKELSKSSVVVFDEAHNIDNVCIDSMSVKINRRTLEKSSANIQLLEKTVAEMRED- 294
Query: 275 DISSTRRGQS------SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG 324
D++ + D + + IL +L E VP N + +GF +
Sbjct: 295 DVNKLKEEYERLVEGLKDAHVARETDIILANPVLPDEILQEVVPGNIRNAEHFVGFLRRF 354
Query: 325 -PYIYELLADLNITQETAYKLIDIVEVAAELLQED-KLQNKKSTTACRIESISNILK--- 379
Y+ L ++ QE+ + V+ + ++ + ++ + R I+++
Sbjct: 355 VEYLKTRLRVQHVVQESPAAFLRDVQTKVSIERKPLRFCAERLASLLRTMEITDLTDFSP 414
Query: 380 -IIFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLE 434
I+ T S Y + + V D +VL + L + C + IA++ F R +
Sbjct: 415 VILVTHLATLVSTYTKGFTIIVEPFDDKTPNVL----NPILHFVCLDSSIAIKPIFDRFQ 470
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
S+++TSGTLSP+D + + L + + + + IV G ++S Y
Sbjct: 471 --SVVITSGTLSPLDMYPKILNFHPVIMSSFTMTLARPCLLPMIVAKGNDQVAISSKYET 528
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+ + + G +V A VPDGL+ FF SY M+ +A W + + +++ +H
Sbjct: 529 REDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLYMESVVAAWYDQG------VVDQLQRH 582
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K +E + S+ LA+ +Y+ ++ GAV +V RGKVSEG+DF H GRAV++ G
Sbjct: 583 KLLFIETQDSAETSLALINYIRACENGR--GAVLLSVARGKVSEGVDFDHHLGRAVLMFG 640
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+ ++ + EYL Q Q + ++ L+F A R Q VGR IR
Sbjct: 641 IPYVYTQSRILKARLEYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAIR 687
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ DYG ++F D+RF+ ++S++ WIQ H+
Sbjct: 688 GKTDYGIMVFADKRFSRMDKRSKLPKWIQEHL 719
>gi|346326897|gb|EGX96493.1| DNA helicase, putative [Cordyceps militaris CM01]
Length = 774
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 186/680 (27%), Positives = 311/680 (45%), Gaps = 78/680 (11%)
Query: 97 ILYTSRTHSQLRQVIQEL------------------KTSNYRPKMVILGSREQLCIHREV 138
I YTSRTHSQL Q I EL KT + K++ L SR++LCI+ V
Sbjct: 116 IYYTSRTHSQLSQFIAELRRPTFPASLPQDLSGSGAKTQDELVKLLPLSSRQKLCINPSV 175
Query: 139 SLLRG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGR 193
S L+ A N+ C L + + R+C R + + D + DIEDL +G+
Sbjct: 176 SRLKTVQAINDRCAELQQPKSGRKCEFVPR-EELLAQTHEFRDTALATVPDIEDLYQLGK 234
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADA 253
CPY+ +R +IV PY L+ R LG++ + +++I DEAHN+ ++
Sbjct: 235 ALRVCPYYASRTALPGAEIVTLPYPLLLQKSARDALGIKLEGNVVIVDEAHNIMDAVSNV 294
Query: 254 ASFDLSSGLLTACISEAKNCIDISSTRRGQS-------SDETLNPDNFAILRALLLKLEK 306
+ DL L C + + + + G+ + + + + KL
Sbjct: 295 YAADLKLSDLRRC----REMLGVYVRKFGKKLKGVNRVNVGRVGRVVEGLSEYMNTKLNA 350
Query: 307 RIAEVPINSKELGFTKPGPY----IYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN 362
+ ++ EL T+P ++EL+ ++ ++ AYK+ Q+ K
Sbjct: 351 KQDHGIVDPNEL--TRPKGIDQINMFELIQYIHESK-LAYKIEGYATHVDSNQQDGKPHA 407
Query: 363 KKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFN 422
KS+T +S ++ + T S+ R+ ++ +DV LS+ +
Sbjct: 408 PKSSTPVLHTFVSFLIAL------TNLSSEGRIFYQKLPGAQSDV-------QLSYLLLS 454
Query: 423 PGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP-------HVITSKQIW 475
P A + ++IL GT+SP D + L FP+ E+ HVI S +
Sbjct: 455 PTYAFSSIAS-SARAVILAGGTMSPFDDYKDHL---FPMLDESKITTLSCGHVIPSTNLC 510
Query: 476 AGIVPVGPSGYL-LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+ +G SY+ R E +LG I+N+ +VPDG++IFFPSY +D+ +
Sbjct: 511 VRTLAASRAGGPPFEFSYQRRGDQEMIGQLGLAILNMCSVVPDGVVIFFPSYGYLDEVVQ 570
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM-AKLKDTSTSGAVFFAVCR 593
WK G+ + WER+ K KK + + + + ++ Y A + GA+ +V
Sbjct: 571 VWKTKRAGDAQSTWERL-KSKKTIFQETKGASSDEVLQKYSEAIFGAQAGGGALLLSVVG 629
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS----QGG--EYKETK 647
GK+SEG++F+D GR V + G+P+ + P + K EY++ ++ +GG + T
Sbjct: 630 GKMSEGINFSDRLGRLVAVVGLPYPNIASPDWKAKMEYIESSTRTRLLERGGIPPAEATS 689
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+ + D+Y RAVNQ++GR IRH+ DY AI+ D R+ +S++ WIQ +Q
Sbjct: 690 RAKQTARDFYENSCMRAVNQSIGRAIRHKGDYAAIVLLDRRYTSERIRSKLPGWIQGGLQ 749
Query: 708 CYSK---FGDVVYTLTRFFR 724
+ G V+ L FFR
Sbjct: 750 VDVQEKGLGGVMGALGSFFR 769
>gi|307210249|gb|EFN86899.1| TFIIH basal transcription factor complex helicase subunit
[Harpegnathos saltator]
Length = 735
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 198/732 (27%), Positives = 336/732 (45%), Gaps = 105/732 (14%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M ++ + L K + LLE P+GTGKT+ LL +A+ L +N
Sbjct: 1 MLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAY--------MLEYPLN---------- 42
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELKT--------SNYRPKMV--ILGSREQLCI 134
+ ++Y SRT ++ +VI+ELK + +PK+V +L SR+ +CI
Sbjct: 43 ---------VTKLIYCSRTVPEIEKVIEELKKLIDYYETETKSKPKIVGLVLSSRKNMCI 93
Query: 135 HREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADYMKNNPHLGDEPI------DI 185
H EVS R G + C L R NH + + ++ + G E I +
Sbjct: 94 HPEVSREREGKIVDGRCHSLTASYVRERHNHDESTPICNFYEGFDMEGREQIVPPGIYSL 153
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAH 244
+DL + G+ G CPYF+ R IV Y+YL+DP + + E K+S+++FDEAH
Sbjct: 154 DDLKDYGKDRGWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKSSVVVFDEAH 213
Query: 245 NLEGICADAASFDLSSGL----------LTACISEAKNCIDISSTRRGQSS------DET 288
N++ +C D+ S ++ L L ++E ++C D++ + D
Sbjct: 214 NIDNVCIDSMSVKINKKLMERSTNNIQLLEKTVAEMRDC-DVNKLKEEYDRLVAGLRDAQ 272
Query: 289 LNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PYIYELLADLNITQETAYK 343
L + IL +L E VP N + + F K Y+ L ++ QE+
Sbjct: 273 LARETDVILANPVLPDEILEEIVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVMQESPAA 332
Query: 344 LIDIVEVAAELLQED-KLQNKKSTTACRIESISNILK----IIFRDKGTAHSAY---YRV 395
+ ++ + ++ + ++ + R I+++ I+ T S Y + +
Sbjct: 333 FLRDIQAKVSIERKPLRFCAQRLASLLRTMEITDMTDFSPIILVTHLATLVSTYTHGFTI 392
Query: 396 HVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQE 454
V D VL L + C + IA++ F R + S+I+TSGTLSP+D + +
Sbjct: 393 IVEPFDDKTPTVLNP----ILHFSCLDSSIAIKPIFDRFQ--SVIITSGTLSPLDMYPKI 446
Query: 455 LKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
L + + + + IV G ++S Y R+ + + G +V A
Sbjct: 447 LNFHPVIMSSFTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAAT 506
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
VPDGL+ FF SY M+ +A W + + +++ +HK +E + S+ LA+ +Y
Sbjct: 507 VPDGLVCFFTSYLYMESVVAAWYDQG------VVDQLQRHKLLFIETQDSAETSLALINY 560
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
+ ++ GAV +V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL
Sbjct: 561 IKACENGR--GAVLLSVARGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRD 618
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
Q Q + ++ L+F A R Q VGR IR + DYG ++F D+RF+ +
Sbjct: 619 QFQIRENDF----LTF---------DAMRHAAQCVGRAIRGKTDYGIMVFADKRFSRVDK 665
Query: 695 KSQISLWIQPHI 706
+S++ WIQ H+
Sbjct: 666 RSKLPKWIQEHL 677
>gi|391868700|gb|EIT77910.1| helicase of the DEAD superfamily [Aspergillus oryzae 3.042]
Length = 734
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 203/771 (26%), Positives = 345/771 (44%), Gaps = 108/771 (14%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQV 73
P+ YD QL +M + ++ A+ ESPTG K L TL K
Sbjct: 11 PYSPYDIQLQFMRALYSCIEKGKVAVFESPTG--KLAGLSTGTLELLKRF---------- 58
Query: 74 NNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR---PK-------- 122
Q S GD + ILY SRTHSQL Q EL+ N PK
Sbjct: 59 --QHKSSAHPRQDEDYGDEDI-KILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVAD 115
Query: 123 ---------MVILGSREQLCIHREVSLLRG-SAQNNACRFLCKKGT--NRRCNH---HSR 167
+ LGSR+ LCI+ VS L +A + C + + G +RC +
Sbjct: 116 TDGLQEGVRHLSLGSRKNLCINPRVSYLDNVTAISERCLDMQQPGVAAEQRCPFLPSNEN 175
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
A ++ H+ DIED+ +G+ G CPY+ +R + K +IV PY L+ R
Sbjct: 176 EAQVLQFRDHVLATVKDIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARD 235
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST--RRGQSS 285
L + K +++ DEAHNL ++ S +T +SE + + +T R+ ++
Sbjct: 236 ALDLSIKGHVVVIDEAHNLMDAISNIHS-------VTITLSELQTSLFQLTTYARKFKTR 288
Query: 286 DETLNPDNFAILRALLLKLEKRIAEVPINSKEL-GFTKPGPYIYELLADLNITQETAYKL 344
+ N + A + L+ + + + S+ G +P +L++ + Q YKL
Sbjct: 289 LKGKNRNYIAQVIRLVTSITDHLKTILETSQAPEGPVQPS----DLMSGKGVDQINPYKL 344
Query: 345 IDI---------VEVAAELLQE--DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYY 393
V+ +E +E D+ ++K +T S +L ++ + +Y
Sbjct: 345 CRYLRESKLARKVDGYSEFSRERADRQADRKPSTPVLFHIQSFLLPLM--NLSAEGKLFY 402
Query: 394 RVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSF 451
+K + L + +P M +F + + ++IL GT+SPM +
Sbjct: 403 --------------IKAQGDIQLKYMLLDP---MNQFREIVDDARAVILAGGTMSPMTDY 445
Query: 452 AQELKLNFPL-------RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
L FP HVI + + A ++ G +G + ++ RDS +L
Sbjct: 446 IHHL---FPYVPSSRLGTFSYGHVIPPENLIAQVLGKGVTGTEFDFTFETRDSERMIVDL 502
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT-TIWERICKHKKPVVEPRQ 563
G T+ + +++PDG++ FFPSY + Q ++ WK T G T+++ I K + E R
Sbjct: 503 GRTMAALCQVIPDGVVAFFPSYDYLSQVLSIWKRTLAGEKNRTVYDLIEGKKTILHESRD 562
Query: 564 SSLFPLAIEDYMAKLKDT--STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMT 621
++ + E+ + + S GA+ +V GK+SEG++F+D GR V+I G+PF +
Sbjct: 563 VTI---STEELLQEYASIVGSGRGALLLSVVGGKLSEGINFSDRLGRGVLIVGLPFPNIR 619
Query: 622 DPKVRLKREYLDLQA--QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ K Y++ +A +S G + ++ +G+D+Y RAVNQ +GR IRHR+DY
Sbjct: 620 SAVWQAKIHYVEQKAYKESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAIRHRNDY 679
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF---GDVVYTLTRFFREER 727
AI+ D R+ P+ + ++ WI+ + S G + +L++FF +R
Sbjct: 680 AAIVLMDRRYDKPAIQGKLPAWIKQSMASSSALRPAGATIGSLSKFFVAQR 730
>gi|345492904|ref|XP_001602139.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Nasonia vitripennis]
Length = 869
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 188/694 (27%), Positives = 314/694 (45%), Gaps = 96/694 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPK--MVILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I + SRTHSQL Q + ELK S Y K +V L SR CI+ +V L+ + N+ C+ L
Sbjct: 202 IFFCSRTHSQLSQFVGELKKSPYFDKVSLVSLASRNNYCINSKVKALKSINLINDQCQQL 261
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHL-GDEPI----------DIEDLVNIGRTFGPCPYFM 202
KK + + + + P + GD+ + DIE+ V + CPY+
Sbjct: 262 QKKKATSKQEKDLKRSKTSTSCPFMPGDQSLLMAEILTSIRDIEETVKLSEEIKTCPYYS 321
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
TR+ + ++ PYN ++ R G+ KN+ILI DEAHNL L+
Sbjct: 322 TRKSVEDGQVILVPYNSILHKNTRVSSGINLKNNILIVDEAHNLLEAIERMHCVTLTGKH 381
Query: 263 LTACISE-------------AKNCIDIS--------------STRRGQSSDETLNPDNFA 295
+ C+++ AKN + +S T R + D+ P N A
Sbjct: 382 ILHCLNQLTQYKKRFENVLTAKNVLFLSQISFCMKKLLKLLGGTFRSRPDDK---PTNTA 438
Query: 296 ILRALLLKLEKRIAEV-PINSKEL-GFTKPGPYIYELLA------DLNITQETAYKLIDI 347
+ + L+ + AE+ +N +L GF + +++L D + +E + +
Sbjct: 439 VTKLYSLEEFEITAEIDTVNMFDLIGFIQKSKLVHKLRGYVEKYEDDLVPKEVIKEKKGV 498
Query: 348 VEVAAELLQEDKLQNKKSTTACR---IESISNILKII--FRDKGTAHSAYYRVHVREADA 402
L +++ ++ K++ T R E I++ + +I F + + + R+ V
Sbjct: 499 TAFLESLQKKEVVEMKENVTVPRETEKEPITSPMMVITSFLETLRSSCSDGRIFVLPGTT 558
Query: 403 NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
LK + NP + + E +++L GT+ PM F ++L ++ +
Sbjct: 559 VGEGCLK--------FLLLNPAAHFADIVQ-EARAVVLAGGTMEPMSEFKEQLFISAGAK 609
Query: 463 VEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
E HVI + I I+ GP+G +++NR + + ELG T+VN+ IVP
Sbjct: 610 SERIVTFSCDHVIPKENILTCILKTGPTGIDFEFNFQNRQNTKMLDELGRTLVNLCNIVP 669
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV-EPRQSSLFPLAIEDYM 575
GL++F PSY D + S+G LT I + KK V EP+ ++ +E Y
Sbjct: 670 AGLVVFLPSYSYEDLLFKHLE--SNGVLTKI-----RTKKTVFREPKSTTQVNQILEKYA 722
Query: 576 --AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
AK +GA+ F+V GK+SEGL+F+D GR V++ GMP+ + P+++ K +YL+
Sbjct: 723 SAAKTPQKPQNGAILFSVVGGKLSEGLNFSDDLGRCVIVVGMPYPNVKSPELQEKMKYLN 782
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
G +Y +AVNQ +GR +RH DY ++ D R+++ +
Sbjct: 783 ENVNPNAGSV------------FYENSCMKAVNQCIGRAVRHIADYSTVVLLDRRYSNKT 830
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+ + WIQ + FG V L RFF +R
Sbjct: 831 K--SLPGWIQRTLTIQPNFGSCVQALARFFAAKR 862
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 18 YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
Y Q +M+ + L+N + ESPTGTGKTL ++C L W
Sbjct: 14 YSIQADFMKNLYMCLENGNLGIFESPTGTGKTLSIICGALKW 55
>gi|410980592|ref|XP_003996661.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Felis catus]
Length = 1230
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 193/326 (59%), Gaps = 21/326 (6%)
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
V + A R L++WC NP +A + + +V +I++TSGTLSPM SF+ EL + F +++E
Sbjct: 580 VRQKTAVRVLNFWCLNPAVAFSDING-KVWTIVVTSGTLSPMKSFSSELGVTFSIQLEAN 638
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HVI + Q+W G + GP G L +++++ ++ E++ E+G ++++ + V G+L F PSY
Sbjct: 639 HVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALVLSVCQTVSQGILCFLPSY 698
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIEDYMAKLK-DTST 583
L+++ W +T +W + K +VEP F ++ Y +K
Sbjct: 699 KLLEKLKERWLSTG------LWHNLELVKTVIVEPPAGEKIDFDELLQMYYDAIKYKGEK 752
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +V LKR+Y D ++ +G
Sbjct: 753 DGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVVLKRQYNDQHSKLRG--- 809
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLW 701
L G WY QA RA+NQA+GR IRH++D+GA+I D+RF ++P++ S +S W
Sbjct: 810 ------LLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFSSNPAQYISGLSKW 863
Query: 702 IQPHIQCYSKFGDVVYTLTRFFREER 727
I+ +Q +S F + +L F ++ R
Sbjct: 864 IRQQVQYHSTFESAMESLAEFSKKHR 889
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSRE 130
Q N+Q G ++ G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+
Sbjct: 223 QGNSQ--GYSNTTKKDHGGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRD 280
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIE 186
C+H EV + +N C L + C + V + E + DIE
Sbjct: 281 HTCVHPEV--VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTLEGMCKAWDIE 338
Query: 187 DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+LV++G+ CPY+ REL + IVF PYNYL+D R+ + + K I+I DEAHN+
Sbjct: 339 ELVSLGKKLKACPYYTARELIEDAHIVFCPYNYLLDAQIRESMDINLKEQIVILDEAHNI 398
Query: 247 EGICADAASFDLS 259
E ++AS+ ++
Sbjct: 399 EDCARESASYSVT 411
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ + FP++AY QL M +++ L +K + LLESPTG+GK++ LLC+ LAW++S
Sbjct: 8 YTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSVALLCSALAWQQSF 67
Query: 64 G 64
Sbjct: 68 N 68
>gi|312088350|ref|XP_003145827.1| hypothetical protein LOAG_10252 [Loa loa]
Length = 554
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 183/324 (56%), Gaps = 11/324 (3%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
TL++WCF+P +AM V S+I+TSGTLSP+DSF L ++FP+ +EN H QI
Sbjct: 11 TLNYWCFSPSVAMWYLQSCGVRSVIVTSGTLSPLDSFVNSLGISFPITLENEHAANLDQI 70
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+ G L ++ R + + E+ I+ +I+P G+L+FF SY +M+ C+
Sbjct: 71 LGARIRFSQGGIDLCGTFHKRIYL-WSWEV---IIRACQIIPGGILVFFSSYVVMNSCLK 126
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
WK G T +WE I HK+ +EP+ + + K+++ +GA+ FAVCR
Sbjct: 127 FWKTAKFG-ATFMWEAITTHKEAFIEPKSKLELKAVLLQFRQKVREGGGNGAILFAVCRA 185
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF D R V++ G+P+A T+P++ LK+++ L + G KE K + +S +
Sbjct: 186 KVSEGIDFLDSESRGVIVIGIPYAPTTNPRIELKKQF--LTKERNGVAKKELKKN-ISAD 242
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRKSQISLWIQPHIQCYSKFG 713
+WY A R VNQA+GRV+RH+ D+G +I D RF + PS++ W++ ++ Y G
Sbjct: 243 EWYQVDAIRGVNQAIGRVLRHKDDFGVVILVDSRFCSMPSKR--FPSWMRESLKNYQNIG 300
Query: 714 DVVYTLTRFFREERICGSTNLKLI 737
+FF++ I N + I
Sbjct: 301 HFENDCKQFFKKRNIEVCVNQRTI 324
>gi|55925522|ref|NP_001007320.1| probable ATP-dependent RNA helicase DDX11 [Danio rerio]
gi|55250690|gb|AAH85645.1| Zgc:92172 [Danio rerio]
Length = 890
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 194/704 (27%), Positives = 318/704 (45%), Gaps = 99/704 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S Y ++V LGSR+ LCI+ EV L G+ Q N C
Sbjct: 208 IYYCSRTHSQLAQFVHEVQKSPYGDAVRLVNLGSRQNLCINPEVVRL-GNVQMMNERCLE 266
Query: 153 LCKKGTNRRC------NHHSR-------VADYMKNNPHLGDEPI----DIEDLVNIGRTF 195
+ K +R + SR V +N + DE + D+E L+ GR
Sbjct: 267 MQKNKHEKRQKASDSESKRSRGLAKATCVFSRFENLMAMKDEVLVKVRDVEQLIQHGRET 326
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ TR +V PY L+ RK G++ K+ I+I DEAHNL + S
Sbjct: 327 HTCPYYSTRMSIPAAQVVVLPYQSLLHASTRKASGIKLKDQIVIIDEAHNLMDTISAIHS 386
Query: 256 FDLSSGLLTACISE-------------AKNCIDIS---------------------STRR 281
++S G L S+ AKN + I +T+
Sbjct: 387 AEISGGQLCRAHSQLSQYCERYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGQNPNTQS 446
Query: 282 GQSSDETLNPDNFAILRAL----LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNIT 337
Q+ E L ++F + L K++K + I+ K GF + YE + +N
Sbjct: 447 CQTGSELLTINDFLFKAQVDNINLFKVQKYFEKSMISRKLCGFAEK----YEG-SGINTH 501
Query: 338 QETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHV 397
+ K E LQ LQ+K + + + ++ + I+ A S + +
Sbjct: 502 SSSKNKENRRTEGLWRFLQ--TLQSKPTDVSEQQMAVED-KPIMASPMMLAESFLF--AL 556
Query: 398 READANAADVLKGKA---SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQE 454
A+ + V++ +A +L + N + + + E ++I+ GT+ P+ F ++
Sbjct: 557 TNANKDGRIVIQRQACVAQSSLKFLLLNAAVHFAQILQ-ECRAVIIAGGTMQPVADFKEQ 615
Query: 455 LKLNFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTI 508
L + + E HVI + I ++ GPSG L +++ RDS + +E G +
Sbjct: 616 LLFSAGVTEERILEFSCGHVIPPENILPIVLCAGPSGQQLEFTFQTRDSPQMMEETGRVL 675
Query: 509 VNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFP 568
N+ IVP G++ FFPSY + + W++T I +R+ KK EP+++S
Sbjct: 676 SNLCNIVPGGVVCFFPSYEYEKRILGHWESTG------ILQRLQSKKKIFQEPKKASQVE 729
Query: 569 LAIEDYMAKLKDTST-----SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDP 623
+ +Y ++ S +GA+ F+V GK+SEG++F+D GR +V+ GMP+ + P
Sbjct: 730 QVLSEYSKCIQRCSNIGGGQTGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSP 789
Query: 624 KVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
+++ K YLD G+ G+ +AVNQ++GR IRHR DY I+
Sbjct: 790 ELQEKMAYLDKHMPHVAGKS--------PGKALVESLCMKAVNQSIGRAIRHRGDYACIV 841
Query: 684 FCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
CD R+A ++ WI+ ++ FG + RFF E+R
Sbjct: 842 LCDHRYARTGTLQKLPEWIRSSTHTHATFGPAFASARRFFLEKR 885
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF+ Y Q +ME + +L + + ESPTGTGK+L L+C L W
Sbjct: 10 FPFQPYPIQESFMEALYTALDQRKVGIFESPTGTGKSLSLICGALTW 56
>gi|193606019|ref|XP_001943653.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Acyrthosiphon pisum]
Length = 756
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 203/761 (26%), Positives = 350/761 (45%), Gaps = 121/761 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I ++V FP+E Y Q YM ++ +++ K + LLE P+GTGKT+ +L +A+
Sbjct: 3 FFIDELEVLFPYEYIYPEQYAYMVELKKAIDAKGHCLLEMPSGTGKTITILSLIVAYMIK 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-------K 115
+KL +LY++RT S++ + +EL K
Sbjct: 63 Y---------------------------PAKLGKLLYSTRTLSEIEKAAEELRVLCDYYK 95
Query: 116 TSNYRPKM--VILGSREQLCIHREVS-LLRGSAQNNACRFLCKKGTNRRC--NHHSRVAD 170
++ Y + V+L SR+ LC++ ++ G + C L R V +
Sbjct: 96 SNKYDANVLGVVLSSRKNLCVNPSIAGEHNGRVVDARCHALTAPFVRARHADGEAVNVCE 155
Query: 171 YMKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
+ + LG + I +IEDL +G G CPYF+ R+ ++V Y+YL+DP
Sbjct: 156 FYEKLDSLGRDTILPPNIYNIEDLKELGVKQGICPYFVARQTLIHANVVIYSYHYLLDPK 215
Query: 225 FRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ 283
+ ++ KN+I++FDEAHN++ +C D+ S ++S L I E N +D T +
Sbjct: 216 IAGIVSKDFNKNTIVVFDEAHNIDNVCIDSLSSHITSNNLDKAI-EGLNKLDTEVTAMKE 274
Query: 284 SSDETLNPD-----------------NFAILRALLLKLEKRIAEVP--INSKE--LGFTK 322
+ L + N A+ ++ +I E+P I S E +GF K
Sbjct: 275 RDSQRLKEEYRKMVDGLREIYRNREANAALANPIVPDQVLKITELPGSIRSAEHYIGFMK 334
Query: 323 PGPYIYELLADLN---ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILK 379
+I L +N + QET I V + N+K C E +S++L+
Sbjct: 335 R--FIMYLKLRMNSTTVVQETPIMFIKDV-------YQKVCINRKPLRFCT-ERLSSLLR 384
Query: 380 IIFRDKGTAHSAYYRVHVREADANAADVLKG-------------KASRTLSWWCFNPGIA 426
+ + T S + V + + +KG S + + C + IA
Sbjct: 385 TLEISEITDFSPL--ITVAQFATLVSTYMKGFMIIIEPFDERSSTDSCVMHFSCLDASIA 442
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWA-GIVPVGPSG 485
++ ++++TSGTLSP+D + + L +N P+ + + + S+Q + +V G
Sbjct: 443 IKPILDY-FNTVLITSGTLSPLDMYPKILNIN-PVIMTSLTMTLSRQCFLPMVVGRGNDQ 500
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
L S + +R+ + G+ ++ + ++VPDG++ FFPSY M +A W +
Sbjct: 501 VALTSKWESREDSSVARNYGHLLLEMVKVVPDGVVCFFPSYLYMKSVVAAWYDQG----- 555
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
+ E+I +K +E + + AI+ Y ++ GA+ +V RGKVSEG+DF H
Sbjct: 556 -LIEKILDYKLIFIETQNIVVTNHAIKCYAEAIE--RGKGALLLSVARGKVSEGMDFDHH 612
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
GRAV++ GMP+ ++ + EYL Q Q G++ L+F A R
Sbjct: 613 YGRAVIVLGMPYVYTQCRILKARMEYLCSQYQISEGDF----LTF---------DAMRHT 659
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
Q VGR IR + DYG ++F D+RFA ++S++ WIQ ++
Sbjct: 660 AQCVGRAIRGKMDYGIMVFADKRFARHDKRSKLPKWIQAYL 700
>gi|302847399|ref|XP_002955234.1| hypothetical protein VOLCADRAFT_96085 [Volvox carteri f.
nagariensis]
gi|300259526|gb|EFJ43753.1| hypothetical protein VOLCADRAFT_96085 [Volvox carteri f.
nagariensis]
Length = 1606
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 175/313 (55%), Gaps = 50/313 (15%)
Query: 412 ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI-T 470
A+ +L WC NP +A + + + S++LTSGTL+P+DSFA EL F R+E PHV+
Sbjct: 695 AAVSLGLWCLNPAVAFRSLAD-KAHSVVLTSGTLAPLDSFASELGTEFHFRLEAPHVVDM 753
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
S+Q+WAG+VP GP G LL+++YR ++ ++ + G ++ +++P G+L+F PSY L+D
Sbjct: 754 SRQVWAGVVPRGPGGSLLSATYRESGTLAFQDDAGEAVLRYCQVIPGGVLLFMPSYSLLD 813
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL-FPLAIEDYMAKLKDTSTSGAVFF 589
+ ++ W+++ T +W R+ K VVEPR++ F A+ Y
Sbjct: 814 RLMSRWQSS-----TGLWSRLEAVKTVVVEPREAGRGFEEAMSSYY-------------- 854
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
G SEG+DFAD R V++ G+PF + D K
Sbjct: 855 ----GAASEGIDFADGFARGVILLGIPFPAIKDTK------------------------R 886
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCY 709
L+G+ WYNQQA RA+NQAVGR IRH++D+GAII DERF R+ Q+S W++ ++ +
Sbjct: 887 LLTGDAWYNQQAFRALNQAVGRCIRHKYDWGAIILLDERFRGSGRQQQLSRWVRTAVKVH 946
Query: 710 SKFGDVVYTLTRF 722
F + L F
Sbjct: 947 EDFNTSITELDAF 959
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
Query: 91 DSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNAC 150
D K P I + +RTHSQ+ QV++ELK S Y+P M IL +++ CI+++V R + C
Sbjct: 196 DFKPPKIFFATRTHSQIAQVVRELKRSGYKPTMAILAAKQHYCINKKVR--RTGRVDEEC 253
Query: 151 RFLCKKGTNRRCNHHSRVADYM-KNNPHLGDEPIDIEDLV---NIGRTFGPCPYFMTREL 206
L K+ + C + + A + P +G DIE+L + GR C YF+ R+L
Sbjct: 254 DKLLKE-SEYGCRYRGKAAGRAGRTPPEIGLH--DIEELAAKCSNGRNP-TCAYFVARDL 309
Query: 207 QKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
T D+VF PY YL+DP R LG++ ++LIFDEAHN+E +C + S DL
Sbjct: 310 ALTADLVFCPYTYLLDPLVRAALGIDVGGAVLIFDEAHNMEDVCREGGSMDL 361
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M+K++++L + NALLE PTG GKTL LLCA LAW+
Sbjct: 1 MDKMLRALAEQGNALLEMPTGCGKTLSLLCAALAWQ 36
>gi|328714715|ref|XP_003245432.1| PREDICTED: Fanconi anemia group J protein homolog isoform 2
[Acyrthosiphon pisum]
Length = 912
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 171/309 (55%), Gaps = 18/309 (5%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
+S+ C NP E + +IILTSGTLSPM SF EL FP+ +E HVI Q W
Sbjct: 606 ISFLCLNPAAVFGEL-KSTARTIILTSGTLSPMQSFQSELGTQFPIALEAGHVIKPDQCW 664
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
V VGP G LN YRN ++ Y+ E+G + ++ VP G+L F PSY LM++ +
Sbjct: 665 VSSVSVGPDGTDLNGQYRNINTYNYQDEMGKVLWDVCAAVPHGVLCFMPSYMLMEKLYSR 724
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK--DTSTSGAVFFAVCR 593
W+ T N R+ + K + EPR+ + Y A ++ + SGA+F AV R
Sbjct: 725 WQVTGQLN------RLKQIKVVMCEPRRGDQLEELMTKYYAAVRGDEKGPSGALFLAVYR 778
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GK+SEGLDF+D+ RAVV G+PF D V K++Y D +++G L G
Sbjct: 779 GKISEGLDFSDNNARAVVAVGIPFPNYKDAAVTHKKDYNDKHHKNKG---------LLPG 829
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFG 713
+WY QA RA+NQA+GR IRHR+D+GAI+ D R+ P S +S WI+ ++ + +
Sbjct: 830 WEWYQIQAYRALNQALGRCIRHRNDWGAILLVDSRYEQPKNLSGLSKWIRGRVERNNSWS 889
Query: 714 DVVYTLTRF 722
+V L F
Sbjct: 890 TIVTKLKNF 898
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 19/184 (10%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSREQLCIHRE---VSLLRGSAQNNA 149
+P I + +RTH Q+ QVI+EL+ +++ K +L SRE CI + ++
Sbjct: 207 IPVIYFCTRTHKQIEQVIKELQRTSFNTAKSCVLASREHTCIQDSNIYYPQISYKSKTEL 266
Query: 150 CRFLCKKGTNRR-----------CNHHS----RVADYMKNNPHLGDEPIDIEDLVNIGRT 194
CR L RR C+++ +++ Y + + DIED+V +G +
Sbjct: 267 CRDLLDPKARRRNSIKFRRTIDRCSYYDNGGVKISTYGQLAKFGVESVWDIEDIVRLGIS 326
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ TR L KT +IVF PYNY+IDP R + ++ K ++I DEAHN+E C +AA
Sbjct: 327 KKSCPYYGTRLLLKTAEIVFCPYNYIIDPVIRNTMNLKLKGHVIIVDEAHNIEDQCREAA 386
Query: 255 SFDL 258
S L
Sbjct: 387 SLQL 390
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
TY I G+ +E P Y Q+ M+KVI+ Q + N LLESPTG+GKTL LLC+ LAW+K+
Sbjct: 13 TYTIGGVKIEMPVRPYPSQVSMMDKVIRGCQRQQNCLLESPTGSGKTLALLCSALAWQKA 72
>gi|408390405|gb|EKJ69805.1| hypothetical protein FPSE_10005 [Fusarium pseudograminearum CS3096]
Length = 863
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 186/674 (27%), Positives = 309/674 (45%), Gaps = 70/674 (10%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP-----------------KMVILGSREQLCIHREVS 139
I YTSRTHSQL Q I EL+ ++ P K++ L SR++LCI+ VS
Sbjct: 208 IYYTSRTHSQLSQFITELRRPSFPPSLPTSLSKQEETKTEAVKLLPLSSRQRLCINPAVS 267
Query: 140 LLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGR 193
L GS Q N+ C L + + ++C + D + D + DIEDL +G+
Sbjct: 268 RL-GSVQAINDRCSELQQPKSGQKCPFVPK-EDLLSQTHQFRDSALATLPDIEDLHQLGK 325
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD- 252
+ CPY+ +R +I+ PY L+ R LGV+ + SI+I DEAHN+ A+
Sbjct: 326 SLAVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEGSIVIVDEAHNIMDAVANV 385
Query: 253 -AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
AA LS + + + + R G+ + +N N + ++ L + +
Sbjct: 386 HAAEIKLSD------LRRGRGMLGVYVKRFGKKL-KGVNRVNVGRVARVIDGLSEWMDGA 438
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
+E G P +L I Q ++LI + +Q+ KL K + +
Sbjct: 439 LKFKQEHGIVDPN----DLTRSKGIDQINMFELI-------QYIQDSKLAFKIESYISHV 487
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVREADANAADV----LKGKASRTLSWWCFNPGIAM 427
ES K HS + ++ + +KG LS+ +P A
Sbjct: 488 ESEEAGTKTPRSSTPVLHSLVSFLIALTNLSSEGRIFYQKIKGTPDIQLSYLLLSPTHAF 547
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNF-PLRVEN---PHVITSKQ--IWAGIVPV 481
+ ++IL GT+SP D + L + P +V HVI + +W P
Sbjct: 548 SSIAS-SARAVILAGGTMSPFDDYKDHLFPSLEPDKVTTLSCGHVIPPENLCVWTLASPR 606
Query: 482 GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH 541
P S++ R E +LG I+N+ +VPDG++IFFPSY +D+ +A W+ +
Sbjct: 607 -PGAPPFEFSFQKRGDTEMITQLGLAILNLCSLVPDGVVIFFPSYGYLDEVVAVWQKSQG 665
Query: 542 GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS--GAVFFAVCRGKVSEG 599
+ ++W+R+ K E R +S + +++Y ++ ++ GA+ +V GK+SEG
Sbjct: 666 ASTQSVWDRLGTRKALFKETRGASSEEV-LQEYSDAIQGEKSNGKGALLLSVVGGKMSEG 724
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLD------LQAQSQGGEYKETKLSFLSG 653
++F+D GR V++ G+P+ + P + K EY++ L AQ E +K + +
Sbjct: 725 INFSDRLGRCVLVIGLPYPNIASPDWKAKIEYIETTTRNNLVAQGTTQEQAVSK-AKQTA 783
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK-- 711
D+Y RAVNQ++GR IRHR DY AI+ D R+ + ++ WI+ + S
Sbjct: 784 RDFYENACMRAVNQSIGRAIRHRGDYAAIVLVDRRYGTDRIRGKLPGWIRGGLVGDSHEK 843
Query: 712 -FGDVVYTLTRFFR 724
G ++ + FFR
Sbjct: 844 GLGGLMGAVGGFFR 857
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAW 59
T ++ +D P+ YD Q +M+ V L+ N +LESPTGTGK+L L+CA+L W
Sbjct: 10 TSEMGKLDFHHPYTPYDVQEQFMKAVYDVLESGNGQVGILESPTGTGKSLSLICASLTW 68
>gi|328714717|ref|XP_001943091.2| PREDICTED: Fanconi anemia group J protein homolog isoform 1
[Acyrthosiphon pisum]
Length = 918
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 171/309 (55%), Gaps = 18/309 (5%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
+S+ C NP E + +IILTSGTLSPM SF EL FP+ +E HVI Q W
Sbjct: 612 ISFLCLNPAAVFGEL-KSTARTIILTSGTLSPMQSFQSELGTQFPIALEAGHVIKPDQCW 670
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
V VGP G LN YRN ++ Y+ E+G + ++ VP G+L F PSY LM++ +
Sbjct: 671 VSSVSVGPDGTDLNGQYRNINTYNYQDEMGKVLWDVCAAVPHGVLCFMPSYMLMEKLYSR 730
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK--DTSTSGAVFFAVCR 593
W+ T N R+ + K + EPR+ + Y A ++ + SGA+F AV R
Sbjct: 731 WQVTGQLN------RLKQIKVVMCEPRRGDQLEELMTKYYAAVRGDEKGPSGALFLAVYR 784
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GK+SEGLDF+D+ RAVV G+PF D V K++Y D +++G L G
Sbjct: 785 GKISEGLDFSDNNARAVVAVGIPFPNYKDAAVTHKKDYNDKHHKNKG---------LLPG 835
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFG 713
+WY QA RA+NQA+GR IRHR+D+GAI+ D R+ P S +S WI+ ++ + +
Sbjct: 836 WEWYQIQAYRALNQALGRCIRHRNDWGAILLVDSRYEQPKNLSGLSKWIRGRVERNNSWS 895
Query: 714 DVVYTLTRF 722
+V L F
Sbjct: 896 TIVTKLKNF 904
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 19/184 (10%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSREQLCIHRE---VSLLRGSAQNNA 149
+P I + +RTH Q+ QVI+EL+ +++ K +L SRE CI + ++
Sbjct: 213 IPVIYFCTRTHKQIEQVIKELQRTSFNTAKSCVLASREHTCIQDSNIYYPQISYKSKTEL 272
Query: 150 CRFLCKKGTNRR-----------CNHHS----RVADYMKNNPHLGDEPIDIEDLVNIGRT 194
CR L RR C+++ +++ Y + + DIED+V +G +
Sbjct: 273 CRDLLDPKARRRNSIKFRRTIDRCSYYDNGGVKISTYGQLAKFGVESVWDIEDIVRLGIS 332
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ TR L KT +IVF PYNY+IDP R + ++ K ++I DEAHN+E C +AA
Sbjct: 333 KKSCPYYGTRLLLKTAEIVFCPYNYIIDPVIRNTMNLKLKGHVIIVDEAHNIEDQCREAA 392
Query: 255 SFDL 258
S L
Sbjct: 393 SLQL 396
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
TY I G+ +E P Y Q+ M+KVI+ Q + N LLESPTG+GKTL LLC+ LAW+K+
Sbjct: 13 TYTIGGVKIEMPVRPYPSQVSMMDKVIRGCQRQQNCLLESPTGSGKTLALLCSALAWQKA 72
>gi|444320679|ref|XP_004180996.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS 6284]
gi|387514039|emb|CCH61477.1| hypothetical protein TBLA_0E04230 [Tetrapisispora blattae CBS 6284]
Length = 779
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 202/756 (26%), Positives = 342/756 (45%), Gaps = 118/756 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYQYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRE 94
Query: 122 KMVI---------LGSREQLCIHREVSL-LRGSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H ++S +G+ + CR L G N+R
Sbjct: 95 KELGVKEEFRGLGLTSRKNLCLHPQISKEKKGTVVDEKCRRLTN-GQNKRILENDPDAKV 153
Query: 162 --CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
C++H + N +L + E L+ CPYF+ R + +I+ Y+Y
Sbjct: 154 ELCDYHENLYKLDVEN-YLPNGVFSFEKLIRYCEERTLCPYFIVRRMISMCNIIIYSYHY 212
Query: 220 LIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID-IS 277
L+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ +L A + I
Sbjct: 213 LLDPKIAERVSKEVSKDSIVIFDEAHNIDNVCIESLSLDLTNDVLRKASKGATTLAEKIE 272
Query: 278 STRRGQSSDETLNPDNFAILRAL-----LLKLEKRIAEVPINSKEL------GFTKPGPY 326
R SS L + +++ L L E+ + E P+ S++L G + +
Sbjct: 273 EVREIDSS--KLQDEYEKLVKGLHASDILNAEEEPVVETPVLSEDLLTEAIPGNIRRAEH 330
Query: 327 IYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI 380
L L +T K++ ++ E LQ K ++K C R+ + L++
Sbjct: 331 FVAFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRFCSERLSLLVRTLEV 390
Query: 381 I-------FRDKGT------AHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAM 427
+D T + + + + + A V + + + C + IA+
Sbjct: 391 TEIEDFNALKDIATFATLISTYEEGFLLIIEPYEIENAAV----PNPIMRFTCLDASIAI 446
Query: 428 QE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
+ F R S+I+TSGT+SP+D + + L L+ +T K I+ G
Sbjct: 447 KPVFERF--SSVIITSGTISPLDMYPRMLNFTTTLQKSYSMTLTKKSFLPMIITKGSDQV 504
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
++S + R + G+ +V A+I PDG+++FFPSY M+ I+ W+ + G L
Sbjct: 505 AISSRFEIRSDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIISMWQ--TMGILDE 562
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+W KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF H
Sbjct: 563 VW----KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHHY 616
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GR V++ G+PF ++ + E+L Q + ++ LSF A R
Sbjct: 617 GRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF---------DAMRHAA 663
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RF+ R++Q+ WI
Sbjct: 664 QCLGRVLRGKDDYGVMVLADRRFSR--RRNQLPKWI 697
>gi|303389494|ref|XP_003072979.1| Rad3/XPD DNA repair helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302123|gb|ADM11619.1| Rad3/XPD DNA repair helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 743
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 216/795 (27%), Positives = 350/795 (44%), Gaps = 153/795 (19%)
Query: 5 KIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
+I + V FP+++ Y QL YM +V +SL N + L+E P+GTGKT+ LL T++++ +
Sbjct: 4 QIDEVLVYFPYDSVYPEQLKYMREVKRSLDNNGHCLIEMPSGTGKTVALLSMTISYQLYM 63
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-----TSN 118
S +T N +I +Y SRT S++ + ++EL
Sbjct: 64 KSKNT-----NFKI--------------------IYCSRTVSEVEKALKELDGVVGYIKK 98
Query: 119 YRPKMVI---LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNN 175
+RP + L SR+ LC+++ + L+ + +CR L + + RC D+ +N
Sbjct: 99 HRPFEFLGLGLTSRKNLCLNK--AALKSFNVDVSCRRLVNRLSESRC-------DFFENL 149
Query: 176 PHLGDEPIDIED---LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVE 232
+ P+ + D L IG G CPY++ R D + PYNYLIDP + E
Sbjct: 150 NSFHEVPVAVYDFSQLKEIGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRIYTIVSKE 209
Query: 233 WK-NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNP 291
NS++IFDEAHN++ C + S ++ +L +N ++ + + E+
Sbjct: 210 LGPNSVVIFDEAHNIDSHCIEVMSIEIKRNILEGASRAIRNLENLLKEKGSAAGKES--- 266
Query: 292 DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA 351
A ++++++ E I+S F G YE + ++ + ++
Sbjct: 267 -------AQYEQMKEKLVEPVIDSIPY-FYATGEGNYEFIPG---NLRNSFHFVSALKRI 315
Query: 352 AEL---------------------LQEDKLQNKKSTTAC--RIESISNILKIIFRDKG-- 386
AE ++E KK+ C R+ +S L I D G
Sbjct: 316 AEFFKTKLKTTHLTTESTESFCKSIKELSFVEKKALRFCSQRLGMLSQSLGIDDEDMGHL 375
Query: 387 ----------TAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
+ +S + V D+ A V + TL C + IAM R
Sbjct: 376 KTVADFSTMVSMYSKGFVVIFEPFDSQAPTVF----NPTLRLACLDSSIAMSSVFR-RFR 430
Query: 437 SIILTSGTLSPMDSFAQELKLNF-PLRVE-----------NPHVIT-----------SKQ 473
++I+TSGT+SP+D + + LNF P R+ +P +IT S+
Sbjct: 431 NVIITSGTMSPIDMYPK--ILNFVPSRIAEIGATLDRNSISPLIITKGNDQMTLRALSED 488
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+ A S L +S+ R + G+ +V ++++VPDG++ FFPSY M++ +
Sbjct: 489 VEAVDTHKNDS---LTTSFSLRSDPSVVRNYGHLMVELSKVVPDGIVCFFPSYMYMEEIV 545
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W T+ I I K+K VE +A+ +Y K + G + F+V R
Sbjct: 546 SLWAETN------IISEISKNKLVFVETPDGRETEMALANY--KRACNNGRGGMLFSVAR 597
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF D GR VV+ G+PF VRLK+ L+ + EY
Sbjct: 598 GKVSEGVDFEDGYGRCVVMLGVPFQYTE--SVRLKKRLDFLREEYGIKEY---------- 645
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI---QCYS 710
D+ A R Q +GRV+R++ DYG +I DERF +KS++ WIQ I C
Sbjct: 646 -DFLTFDAMRHAAQCLGRVLRNKSDYGLMILADERFERNDKKSKLPKWIQSCIDGGNCNL 704
Query: 711 KFGDVVYTLTRFFRE 725
+ RFFRE
Sbjct: 705 SVDMALSIARRFFRE 719
>gi|95007442|emb|CAJ20663.1| DNA repair helicase, putative [Toxoplasma gondii RH]
Length = 1250
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 199/719 (27%), Positives = 311/719 (43%), Gaps = 158/719 (21%)
Query: 122 KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHS-------RVADYMKN 174
K+ +LGSR+ LC+H LRG A N AC+ KK C +S ++A ++
Sbjct: 6 KVAVLGSRDNLCVHAVSQKLRGGALNAACK---KKLRGEGCKFYSSSVREKEKIAQVLQA 62
Query: 175 NPHLGDEPIDIEDLVNIGRTFGP--------CPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
P+D+EDL P CP++ R+ Q+ D+V PYNYL+DP +
Sbjct: 63 CG-----PMDVEDLKACATGCSPPGVEKVQFCPFYTMRDYQEKSDLVLLPYNYLLDPSSQ 117
Query: 227 KGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE------------AKNCI 274
NSILI DEAHN+E + DA+SF+L + CI+ A
Sbjct: 118 LLKPGSLANSILIIDEAHNVEQVAEDASSFELRQMDIGRCINALGTLAEMISRKLAVPET 177
Query: 275 DISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYI------- 327
D+S + R SS ++ +L+ L KL++ ++E +++ P +
Sbjct: 178 DVSDSNRKGSSAPPVSVAQLLLLQQSLAKLDEWMSEFELSAPTENLRHPHALLSLEEVTE 237
Query: 328 -YELLADLNITQ--ETAYKLID-------------IVEVAAELLQEDKLQNKKSTTACRI 371
+ +DL+ T+ E LID + + A +Q LQ++ + T I
Sbjct: 238 AFTACSDLSRTRKSEAPASLIDDATPLFSARGKPLLDRLLAACMQ--ALQDEGAETEAHI 295
Query: 372 E-------SISNILKIIFRDKGTAHSAYYRVHV--------------------------- 397
E ++ I I++ D +++ YRV++
Sbjct: 296 EKHVNSLDNLRRIFNILYADLTWQNASSYRVYLHDEGEEAAQRHQQERERETESESRGGW 355
Query: 398 ----------READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSP 447
+E+DA V K R L++W +P A SII TSGTL+P
Sbjct: 356 SKKKRAATASKESDAEVHAVAK---PRCLAFWSMSPAPAFASLLLQGARSIICTSGTLAP 412
Query: 448 MDSFAQEL----KLNFPLRVENPHVITSKQIWAGIV------PVGPSGYLLNSSYRNRDS 497
+ AQ L +L F + +EN HV+ Q++A ++ + LL
Sbjct: 413 LLPLAQRLGTPGRLKFSIFLENDHVVGPSQLFATVLSQVNLSAAAVASGLLGGGEETSAE 472
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFF-----------------PSYYLMDQCIACWKNTS 540
+ +Q + N R D L F+ P Y+ D T
Sbjct: 473 SDTRQNDSRRVWNDFRSYKD--LQFYHRQLDREGTDAKAEAASPPAYVEDA-------TK 523
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
+ T+ + + VE SS L T T GAV AVC+GK +EG+
Sbjct: 524 DSQMETLLSTFQRSVQEAVEADASS--SRDARGGTGHLGGTKT-GAVLLAVCKGKAAEGI 580
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLD-----LQAQSQG-------GEYKETKL 648
DF+DHA RAVVI G+P A+ +P+V+LKR +LD L A++ G G + T
Sbjct: 581 DFSDHACRAVVICGLPLASFFEPRVQLKRMWLDDCMQKLVAETGGASRGKEQGTGETTAP 640
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
++G WY+Q+A RAVNQAVGRV+RH D+G ++F D+RF+ P + + W++ ++
Sbjct: 641 VLINGRQWYDQEARRAVNQAVGRVVRHAKDFGVVVFLDKRFSSPDLQKDLPRWVRRSLE 699
>gi|342878343|gb|EGU79689.1| hypothetical protein FOXB_09802 [Fusarium oxysporum Fo5176]
Length = 864
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 193/686 (28%), Positives = 311/686 (45%), Gaps = 88/686 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP-----------------KMVILGSREQLCIHREVS 139
I YTSRTHSQL Q I EL+ ++ P K++ L SR++LCI+ VS
Sbjct: 206 IYYTSRTHSQLSQFITELRRPSFPPSLPTSLAKSEETKTEAVKLLPLSSRQRLCINPTVS 265
Query: 140 LLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGR 193
L GS Q N+ C L + + ++C + D + D + DIEDL +G+
Sbjct: 266 RL-GSVQAINDRCSELQQPKSGQKCPFVPK-EDLLSQTHQFRDSALATLPDIEDLHQLGK 323
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD- 252
+ CPY+ +R +I+ PY L+ R LGV+ + S++I DEAHN+ A+
Sbjct: 324 SLSVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEGSVVIIDEAHNIMDAVANV 383
Query: 253 -AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
AA LS + + + + + G+ + +N N + ++ L + +
Sbjct: 384 HAAEIKLSD------LRRGRAMLGVYVKKFGKKL-KGVNRVNIGRVGRVIDGLSEWMDGA 436
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
+E G P +L I Q ++LI + +QE KL K + +
Sbjct: 437 LKFKQEHGIVDPN----DLTRPKGIDQINMFELI-------QYIQESKLAFKIESYISHV 485
Query: 372 ES----------ISNILKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWW 419
ES S +L + F T S+ R+ ++ A D+ LS+
Sbjct: 486 ESEDTNSKTPRSSSPVLHTLVSFLIAFTNLSSEGRIFYQKIKGLAPDI-------QLSYL 538
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP-LRVEN------PHVITSK 472
+P A + +++L GT+SP D + L FP L E HVI +
Sbjct: 539 LLSPTYAFSSIAS-SARAVVLAGGTMSPFDDYKDHL---FPSLEPEKITTLSCGHVIPPE 594
Query: 473 Q--IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+W + P S++ R E +LG I+N+ +VPDG++IFFPSY +D
Sbjct: 595 NLCVWT-LASSRPGAPPFEFSFQKRGDTEMITQLGLAILNLCSLVPDGVVIFFPSYGYLD 653
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS-GAVFF 589
+ + W+ S GN W+R+ K E R +S + E A L + S GA+
Sbjct: 654 EVVTVWQK-SQGNAQPTWDRLASRKALFKESRGASSDEVLQEYSDAILGEKSNGKGALLL 712
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ---SQGGEYKET 646
+V GK+SEG++F+D GR V++ G+P+ + P + K EY++ Q + G KE
Sbjct: 713 SVVGGKMSEGINFSDRLGRCVIVIGLPYPNIASPDWKAKIEYIETTTQNNLTAQGVAKEE 772
Query: 647 KLS--FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQP 704
+S + D+Y RAVNQ++GR IRHR DY AI+ D R+ + ++ WI+
Sbjct: 773 AISKGKQTARDFYENACMRAVNQSIGRAIRHRGDYAAIVLVDRRYGTERIRGKLPGWIRG 832
Query: 705 HIQCYSK---FGDVVYTLTRFFREER 727
+ S G ++ + FFR ++
Sbjct: 833 GLVKDSHEKGLGGLMGAVGGFFRGKK 858
Score = 53.1 bits (126), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAW 59
T + +D P+ YD Q +M+ V L+ N +LESPTGTGK+L L+CA+L W
Sbjct: 10 TQDLEKMDFHHPYTPYDVQEQFMKAVYDVLETGNGQVGILESPTGTGKSLSLICASLTW 68
>gi|67470878|ref|XP_651401.1| DNA repair helicase [Entamoeba histolytica HM-1:IMSS]
gi|56468131|gb|EAL46015.1| DNA repair helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710566|gb|EMD49619.1| regulator of telomere elongation helicase rtel1, putative
[Entamoeba histolytica KU27]
Length = 1033
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 197/744 (26%), Positives = 325/744 (43%), Gaps = 134/744 (18%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ 72
FP++ Y Q+ M + Q+++ + L+ESPTGTGKTL LL +TL +
Sbjct: 86 FPYQPYQPQIEMMNSIQQAVKEGKHLLMESPTGTGKTLVLLHSTLTF------------- 132
Query: 73 VNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQL 132
D + ++Y SRTH+QL QV+ E K K ++L SR+
Sbjct: 133 -----------------PDMR---VVYASRTHNQLAQVVNETKKIG-NIKGIVLASRDLY 171
Query: 133 CIHREVSLLRGSAQNNAC----RFLCKKGTNRRCNHHSRVADYMKNNPH----------- 177
CI+ + +N C L K C + D K PH
Sbjct: 172 CIYNPIKTC--DDKNYWCTAKPNLLLKLKHINPCPYRP-FGDDGKILPHVVMACQAVYKE 228
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV------ 231
L I E+LV + + CPY+ R ++ PYN++ R +
Sbjct: 229 LNGIIIPQEELVKVCQKHNLCPYYYARWATVRSKLILCPYNFVTSVSIRHSSDIFLIDQN 288
Query: 232 --EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETL 289
+ +L+ DEAHN+E D+ +F+ + LL I I R Q+ + L
Sbjct: 289 SAHQREFVLVMDEAHNVEDAFMDSLTFNFTESLLNQTIE----TIQFHKKRIKQTPENLL 344
Query: 290 NPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQ----------- 338
++L L+ +E + + ++ L + Y+Y + D
Sbjct: 345 T---ISLLTELISTVES--FSIWMKNRSLPYKDSEHYLYGVFEDQAFLPFVERSPSSSRL 399
Query: 339 -ETAYKLIDIVEVAAEL----LQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYY 393
E + I +V+ +L + ++ S T IE I +++ + + ++
Sbjct: 400 LEAISEYIKVVDNLDDLDIFTREPHVIRYINSFTTQYIEMILFYIQVF---RTPTLTKFF 456
Query: 394 RVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ 453
++ + D N R + + C +P + M ++ V S+I SGTLSPM + AQ
Sbjct: 457 KIVI--TDYNGL--------REMLFRCLSPSLPM-SLLQIVVRSVIFASGTLSPMKAMAQ 505
Query: 454 ELKL------NFPLR-----VENPHVITSKQIWAGIV---PVGPSGYLLNSSYRNRDSIE 499
EL + +F + + HV+ +++ I+ +G S + ++ + IE
Sbjct: 506 ELDIKEHVYKDFIISPGYRMLSTEHVVPPSRVFGRIIISSSLGKSFIFTKKTSQDNEMIE 565
Query: 500 YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV 559
+ G+T+ + P G L+FF SY ++++ + WK HG I+ ++ K K +
Sbjct: 566 ---QAGDTMFRVLSKSPGGALVFFSSYNMLNRIVELWKQ--HG----IYTQLNKLKAIFI 616
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
E + S F ++Y + S GAVF V RGK+SEG+DF D R V++ G+P+ +
Sbjct: 617 ESKDKSEFKKDFKEYQIQ----SKKGAVFLGVFRGKLSEGIDFGDDMARLVIVVGIPYPS 672
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ D V LKREY LSG +WY+ QA RAVNQAVGRVIRH +DY
Sbjct: 673 LGDINVNLKREY--------NSHENLKNPDCLSGSEWYSIQALRAVNQAVGRVIRHINDY 724
Query: 680 GAIIFCDERFAHPSRKSQISLWIQ 703
GA + D+R++ S K +S W++
Sbjct: 725 GAFLLFDKRYSTNSVKEMLSGWMK 748
>gi|392575737|gb|EIW68869.1| hypothetical protein TREMEDRAFT_30972 [Tremella mesenterica DSM
1558]
Length = 796
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 196/754 (25%), Positives = 345/754 (45%), Gaps = 106/754 (14%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++ +
Sbjct: 3 FMIDDLPVLFPYDRIYPEQYSYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVSYMQ- 61
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
F + + ++Y SRT ++ + + ELK YR
Sbjct: 62 ---FYPVKRK------------------------LIYCSRTVPEIEKALAELKRLMEYRV 94
Query: 122 KM---------VILGSREQLCIHREVSL-LRGSAQNNACR-----FLCKKGTNR-----R 161
+M + L SR LC+H EVS +G ++ CR F C+KG
Sbjct: 95 EMGAKDEDFRGLGLTSRRNLCLHPEVSKEKKGKIVDSRCRDLTSAFACEKGRAEPGSVPL 154
Query: 162 CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
C++H + +Y N + ++D+ G+ G CPYF R + VDI+ ++YL+
Sbjct: 155 CSYHEELNNYETGN-LIPPGVYTLDDVKKWGQEKGTCPYFTIRRMMPFVDIIIYSFHYLL 213
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID-ISST 279
DP + + E K SI++FDEAHN++ +C ++ S DL+ +L + D I
Sbjct: 214 DPKVAENVSAEMSKESIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVNKISDKIEEM 273
Query: 280 RRGQSSDETLNPDNFAILRALLLKLEKR------IAEVPINSKELGFTKPGPY--IYELL 331
+R +D T D + L A L + +R +A +++ L PG +
Sbjct: 274 KR---TDATKLQDEYEKLVAGLQEANERREDEDMLASPVLSTDLLEEAMPGNIRKAEHFI 330
Query: 332 ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR------IESISNILKIIFRDK 385
A L E + ++ V AE Q K+ T R E ++N+++ +
Sbjct: 331 AFLKRFIEYMKTRMRVLHVVAETPQSFLAHLKEITFIERRPLKFAAERLTNLVRTLELTN 390
Query: 386 GTAHSAYYRVH-----VREADANAADVLKGKASR-------TLSWWCFNPGIAMQE-FSR 432
H A +V V + +L+ + C +P +A+ F R
Sbjct: 391 IDEHYALQKVAGFGTLVATYEKGFLLILEPYETEHATVPNPIFHMTCLDPSLAIAPVFER 450
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
S+++TSGT+SP+D + + L+ L P +T + ++ G ++S +
Sbjct: 451 F--SSVVITSGTISPLDMYPKILQFQPTLIQSYPMTLTRNAFFPMVITRGSDQVPISSRF 508
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R+ + G+ ++++++ VPDG++ FFPSY M+ ++ W + G L+ +W
Sbjct: 509 EVRNDPAVVRNFGSILIDMSKTVPDGIVAFFPSYLYMESIVSAWYDM--GILSEVW---- 562
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
KHK VE + +A+++Y + GAV +V RGKVSEG+DF + GRAV++
Sbjct: 563 KHKLLFVETPDAMETSVALKNYREACNN--GRGAVMLSVARGKVSEGIDFDHNYGRAVIM 620
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
G+P+ ++ + E+L + + +Y L+F A R Q VGRV
Sbjct: 621 FGIPYQYTESRILKARLEFLRDNHRIRENDY----LTF---------DAMRHAAQCVGRV 667
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+R + D+G ++F D+RFA +++++ LWI +I
Sbjct: 668 LRGKTDWGLMVFADKRFARQDKRAKLPLWINQYI 701
>gi|46126959|ref|XP_388033.1| hypothetical protein FG07857.1 [Gibberella zeae PH-1]
Length = 863
Score = 225 bits (574), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 183/673 (27%), Positives = 310/673 (46%), Gaps = 68/673 (10%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP-----------------KMVILGSREQLCIHREVS 139
I YTSRTHSQL Q I EL+ ++ P K++ L SR++LCI+ VS
Sbjct: 208 IYYTSRTHSQLSQFITELRRPSFPPSLPTSLSKQEETKTEAVKLLPLSSRQRLCINPSVS 267
Query: 140 LLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGR 193
L GS Q N+ C L + + ++C + D + D + DIEDL +G+
Sbjct: 268 RL-GSVQAINDRCSELQQPKSGQKCPFVPK-EDLLSQTHQFRDSALATLPDIEDLHQLGK 325
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD- 252
+ CPY+ +R +I+ PY L+ R LGV+ + SI+I DEAHN+ A+
Sbjct: 326 SLAVCPYYASRTALPGAEIITLPYPLLLQKSARDALGVKLEGSIVIVDEAHNIMDAVANV 385
Query: 253 -AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
AA LS + + + + R G+ + +N N + ++ L + +
Sbjct: 386 HAAEIKLSD------LRRGRGMLGVYVKRFGKKL-KGVNRVNVGRVARVIDGLSEWMDGA 438
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
+E G P +L I Q ++LI + +Q+ KL K + +
Sbjct: 439 LKFKQEHGIVDPN----DLTRSKGIDQINMFELI-------QYIQDSKLAFKIESYISHV 487
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVREADANAADV----LKGKASRTLSWWCFNPGIAM 427
ES K HS + ++ + +KG LS+ +P A
Sbjct: 488 ESEDAGTKTPRSSTPVLHSLVSFLIALTNLSSEGRIFYQKIKGTPDIQLSYLLLSPTHAF 547
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNF-PLRVEN---PHVITSKQ--IWAGIVPV 481
+ ++IL GT+SP D + L + P +V HVI + +W +
Sbjct: 548 SSIAS-SARAVILAGGTMSPFDDYKDHLFPSLEPEKVTTLSCGHVIPPENLCVWT-LASS 605
Query: 482 GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH 541
P S++ R E +LG I+N+ +VPDG++IFFPSY +D+ +A W+ +
Sbjct: 606 RPGAPPFEFSFQKRGDPEMITQLGLAILNLCSLVPDGVVIFFPSYGYLDEVVAVWQKSQG 665
Query: 542 GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS--GAVFFAVCRGKVSEG 599
+ ++W+R+ K E R +S + +++Y ++ ++ GA+ +V GK+SEG
Sbjct: 666 ASTQSVWDRLGTRKALFKETRGASSEEV-LQEYSDAIQGEKSNGKGALLLSVVGGKMSEG 724
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ----SQGGEYKE-TKLSFLSGE 654
++F+D GR V++ G+P+ + P + K EY++ + +QG ++E + +
Sbjct: 725 INFSDRLGRCVLVIGLPYPNIASPDWKAKIEYIETTTRNNLVAQGTTHEEAVSKAKQTAR 784
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK--- 711
D+Y RAVNQ++GR IRHR DY AI+ D R+ + ++ WI+ + S
Sbjct: 785 DFYENACMRAVNQSIGRAIRHRGDYAAIVLVDRRYGTDRIRGKLPGWIRGGLVGDSHEKG 844
Query: 712 FGDVVYTLTRFFR 724
G ++ + FFR
Sbjct: 845 LGGLMGAVGGFFR 857
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAW 59
T ++ +D P+ YD Q +M+ V L+ N +LESPTGTGK+L L+CA+L W
Sbjct: 10 TSEMEKLDFHHPYTPYDVQEQFMKAVYDVLESGNGQVGILESPTGTGKSLSLICASLTW 68
>gi|409044127|gb|EKM53609.1| hypothetical protein PHACADRAFT_148290 [Phanerochaete carnosa
HHB-10118-sp]
Length = 859
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 201/722 (27%), Positives = 337/722 (46%), Gaps = 109/722 (15%)
Query: 77 ISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK----------------TSNYR 120
+S S S N++++ + I YTSRTHSQL QV+QEL+ S
Sbjct: 173 VSKSGYSSNTTEA-EPTCTKIYYTSRTHSQLSQVLQELRKLSISLSPSSDDEQNDASVVD 231
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNH------HSRVADYMKN 174
+ V L SR+QLC++ ++ +G + ACR L + ++RC++ +R+ D M++
Sbjct: 232 IRTVSLASRKQLCVNEKLKG-KGGDLDEACRQLLSEKGDKRCSYLPPADDETRMLD-MRD 289
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
+ P DIE LV G+ CPYF +R+ +V PYN L+ R+ LG++
Sbjct: 290 --QILATPKDIESLVQTGQESRTCPYFGSRKAILQAQLVLLPYNLLLQRTARESLGIDLT 347
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNF 294
+ ++I DEAHNL ++ L L+ +++ I +S R S++ +L+
Sbjct: 348 DQVIIVDEAHNLISTLLSLSTVQLPLRTLSTSLNQL--SIYLSKFRNRLSTEHSLH---- 401
Query: 295 AILRALLLKLE-----------KRIAEVPINSKELGFTKPGPYIY---ELLADLNITQET 340
LR L+ LE KR A I +K G + + EL+A L E
Sbjct: 402 --LRRLVGLLEALSNFAEDWKAKRTASTSIVTKS-GTAQANAEVLTSGELMAKLGRKVE- 457
Query: 341 AYKLIDI-----------------VEVAAELLQEDKLQNKKSTTACRIESISNILKII-- 381
L++I + + + ++ KK ++ + + L ++
Sbjct: 458 GVNLLEIEKYLRSSKVARKISGYCTQAMEKAAGQGEMYPKKLVKLAKLSATTPPLHVVEN 517
Query: 382 FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILT 441
F TA S RV V + A D ++ + + NP QE + +++L
Sbjct: 518 FIVALTAASDGGRVTV----SLAGDQVE------IKYQHLNPATYFQEVVEVAR-AVVLA 566
Query: 442 SGTLSPMDSFAQELKLNFPLRVEN-------PHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
GT+SP+ +L FP + H++ + +V GP G + + +
Sbjct: 567 GGTMSPISDITAQL---FPFVPQERLTTFSCGHIVPPNSLQTLVVKKGPKGSQMQFKFES 623
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+ ELG + N A +VP G+++F PSY + + W+ + + ER+
Sbjct: 624 RNDHALLAELGQVLFNFASLVPGGMVVFVPSYGFLHTVMGVWEKSG------LLERLRSK 677
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLK--------DTSTS-GAVFFAVCRGKVSEGLDFADH 605
KK EP++S+ + DY A+++ DTS GA+ FAV K+SEGL+F+D+
Sbjct: 678 KKVFTEPQESAEVETVLRDYAAEIQSAGDGAPADTSKKRGALLFAVVGAKLSEGLNFSDN 737
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
RAVVI G+PFA + P++R + Y++ Q QG + K +G + Y AV
Sbjct: 738 LARAVVIVGLPFANLASPELRERMAYVN--RQQQGRDVKPAGAKD-AGTELYENMCMNAV 794
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
NQ++GR IRHR D+ ++I D R+A P ++++ WI ++ FG+ V + RF+RE
Sbjct: 795 NQSIGRAIRHRGDWASLILLDSRYASPRIRNKLPKWIGKNVTIAETFGEAVKEMGRFYRE 854
Query: 726 ER 727
+R
Sbjct: 855 KR 856
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF YD QL M + ++++N+ ++ESPTGTGKTL LLCA+L W
Sbjct: 14 FPFAPYDIQLGLMRHLYENIENRRVTVVESPTGTGKTLSLLCASLTW 60
>gi|348682926|gb|EGZ22742.1| hypothetical protein PHYSODRAFT_330481 [Phytophthora sojae]
Length = 873
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT-SKQ 473
TL WC + + + L+ S+IL SGTLSPMDSFA EL ++FP+R+E+ HV+ KQ
Sbjct: 505 TLCIWCLSAAVVFSSLA-LQAHSVILASGTLSPMDSFAGELGVDFPIRLESNHVVNMRKQ 563
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
++ G + GP L S+Y+N+ +Y+ +G ++ A+++P G+L+FFPSY LM
Sbjct: 564 VFIGAIMNGPGNVDLISTYKNQQKFQYQDSMGFLLLQYAQVIPGGILMFFPSYALMHILK 623
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL-FPLAIEDYMAKLKDTSTS-------- 584
A W+ T IW+++ KHK+ EPR F + Y + + S S
Sbjct: 624 ARWQRTG------IWDQLGKHKRMFWEPRLGGKEFDALLIQYKTVIAEHSVSHSTPSGWV 677
Query: 585 --------GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
GA+F AV R KVSEG+DF+D RAV+ G+PF D +V L+REY D ++
Sbjct: 678 NSEEPTQTGAIFLAVYRDKVSEGIDFSDDNARAVLAVGIPFPNFKDLQVSLRREYQDHKS 737
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
+ ++G WY QA RA+NQA+GR IRHR DYGA+I + R S +
Sbjct: 738 R--------VNRKLVNGSWWYKLQAFRALNQALGRCIRHRRDYGAVILIESRHRGNSHGN 789
Query: 697 QISLWIQPHIQCYSKFGDVVYTLTRFFREERI 728
+S W++PH+Q + D FF+ ++
Sbjct: 790 SLSKWMRPHVQEFYSSEDCNPLFAEFFQRNQV 821
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIED+ T C YF ++ + IVF PYNY++DP RK +G+ N+I++ DEA
Sbjct: 325 DIEDITKEASTCDECAYFFSKSALEEAHIVFCPYNYVLDPAIRKAVGINLHNAIVVLDEA 384
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCI 274
HN+E C AS +L+ +LT+ + + I
Sbjct: 385 HNVEDTCRSGASLELTEHMLTSAVKSFDDVI 415
>gi|254578942|ref|XP_002495457.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
gi|238938347|emb|CAR26524.1| ZYRO0B11836p [Zygosaccharomyces rouxii]
Length = 770
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 201/751 (26%), Positives = 341/751 (45%), Gaps = 108/751 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L + N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYHYMCDLKRTLDSGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-------- 114
Q + I+Y SRT S++ + + EL
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRT 94
Query: 115 KTSNYRPKMVILG--SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K YR LG SR+ LC+H +VS R G+ + CR + +
Sbjct: 95 KELGYREDFRGLGLTSRKNLCLHPQVSKERNGTLVDEKCRRMTNGQAKHKQEADPDAKVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C++H + +Y + +L E L+ CPYF+ R + +I+ Y+YL
Sbjct: 155 LCDYHENLYNYQVED-YLPKGVFSFEKLIRYCEERTLCPYFIVRRMISLCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA---KNCID- 275
+DP + + E K+ I+IFDEAHN++ +C ++ S DL++ +L A +N ID
Sbjct: 214 LDPKIAERVSNEVSKDGIVIFDEAHNIDNVCIESLSLDLTNDVLKRATKGAYALENRIDE 273
Query: 276 --ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL------GFTKPGPYI 327
RR Q + L D A +L + E+ E P+ S++L G + +
Sbjct: 274 VRQVDARRLQDEYDKLVQDLHAA--DILDQEEEPAVETPVLSQDLITEAMPGNIRRAEHF 331
Query: 328 YELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKII 381
L L +T K++ ++ E LQ K ++K C R+ + L++
Sbjct: 332 VSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRFCAERLSLLVRTLEVT 391
Query: 382 FRDKGTAHS--AYYRVHVREADANAADVLK-------GKASRTLSWWCFNPGIAMQE-FS 431
+ TA A + + ++ +++ + + + C + IA++ F
Sbjct: 392 EIEDFTALKDIATFATLISTYESGFLLIIEPYEIENAAVPNPIMRFTCLDASIAIKPVFE 451
Query: 432 RLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
R S+I+TSGT+SP+D + + L + L+ + K IV G ++S
Sbjct: 452 RF--SSVIITSGTISPLDMYPRMLNFDTVLQKSYAMTLAKKSFLPMIVTKGSDQVAISSR 509
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
+ R+ + G+ +V A+I PDG+++FFPSY M+ I+ W+ + G L +W
Sbjct: 510 FEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIISMWQ--TMGILDEVW--- 564
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
K+K +VE + LA+E Y ++ GA+ +V RGKVSEG+DF H GR V+
Sbjct: 565 -KYKLILVETPDAQETSLALETYRKAC--SNGRGAIILSVARGKVSEGIDFDHHYGRTVL 621
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
+ G+PF ++ + E+L Q + ++ LSF A R Q +GR
Sbjct: 622 MIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF---------DAMRHAAQCLGR 668
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
V+R + DYG +I D RF+ +++Q+ WI
Sbjct: 669 VLRGKDDYGVMILADRRFSR--KRNQLPKWI 697
>gi|124808195|ref|XP_001348254.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
gi|23497145|gb|AAN36693.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
Length = 1160
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 207/392 (52%), Gaps = 32/392 (8%)
Query: 414 RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN---FPLRVENPHVIT 470
+ +S CF+ ++ + ++ SII+TSGTLSP++ F+++L N F +EN HVI
Sbjct: 537 KNISLLCFSATASLCGIIKEKINSIIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHVIK 596
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
S Q++ G + + LL S+Y NR + Y + LGN I +I +P G+LIFF SY M
Sbjct: 597 SHQLFVGCMTHYNNQILL-STYENRANENYIRSLGNCIFDIIVCIPYGVLIFFSSYSSMT 655
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+ + WK I+++I +K VEP +++ ++ Y +K GA+
Sbjct: 656 ETVNSWKKMK------IYDKINTYKTIFVEPNKATDLKDILDQYEILIK-KKRKGAILMG 708
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD---LQAQSQGGEYKETK 647
VCRGK+SEG+DF D RAV+I G+P+ + D K+ K+E+LD Q +
Sbjct: 709 VCRGKISEGIDFKDDCCRAVIICGLPYGNVYDSKIIFKKEFLDNFKYQKTDERPNSSNIT 768
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+ G WYN++A R++NQ++GRVIRH++DYGAI F D RF++ R +IS W++ H +
Sbjct: 769 SNISKGNKWYNEEAMRSINQSIGRVIRHKNDYGAIFFLDSRFSNNQRIKEISKWVRTHFR 828
Query: 708 CYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTP 767
Y + + +FF E G N P+ L ++ + ++T
Sbjct: 829 IYRDVEQIQSDIDKFF--ELFKGLNN----------------PLQLQKDQNINQKSNNTK 870
Query: 768 AVDQACYSLHEVKNRNTSSHSGEIVPANRSSL 799
++ ++H++ N NT S G + N S+
Sbjct: 871 IMNIYNDNIHDMNNSNTISEGGVTIKENNESI 902
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 161/295 (54%), Gaps = 26/295 (8%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I I+V FP+E YDCQ YM V+ +L+ + NA+LESPTGTGKTLCLLCA++++ +
Sbjct: 22 YTINDIEVYFPYELYDCQYNYMLSVLSALKKRENAILESPTGTGKTLCLLCASISYVVDI 81
Query: 64 ----GSFSTLGSQVNNQISGSQSSVNSSQSGDSKL-----PTILYTSRTHSQLRQVIQEL 114
G F+ + N + S S++S K+ P I+Y SRTHSQL+QVI+EL
Sbjct: 82 LEKKGHFNENINISENNKNISLEFGKSNESVPKKVVANEFPKIIYASRTHSQLKQVIKEL 141
Query: 115 K-------TSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
K Y+ ILGSR+QLC+H +G+ NN C+ K G C +H+
Sbjct: 142 KNVYFIKNNEKYKLLTTILGSRDQLCVHNINYNYKGTLLNNMCKRTRKNG---ECIYHNG 198
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGR------TFGPCPYFMTRELQKTVDIVFAPYNYLI 221
+ Y+ HL P+D+E L IG+ CP++ TRE+Q I+ PYNYL
Sbjct: 199 LK-YLYKLKHLFTTPMDVETLSEIGKGNSVGQNIHFCPFYATREIQNECHIILLPYNYLF 257
Query: 222 DPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI 276
+ RK L + +NSI+I DE HN+E + +A SF L L + K + I
Sbjct: 258 EESTRKILKLNLENSIIIIDEGHNIENVAEEAVSFKLKDTDLNLFLEALKATLTI 312
>gi|410076214|ref|XP_003955689.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS 2517]
gi|372462272|emb|CCF56554.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS 2517]
Length = 779
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 197/753 (26%), Positives = 343/753 (45%), Gaps = 111/753 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL ++A+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLSVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKTLVELENLMDYRS 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
+ + L SR+ LC+H VS R G+ + CR L G N+R
Sbjct: 95 RELGYVEEFRGLGLTSRKNLCLHPVVSKERKGTVVDEKCRRLTN-GVNKRKLQENPDATD 153
Query: 162 ---CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYN 218
C +H + D M+ +L E L+ CPYF+ R + +I+ Y+
Sbjct: 154 AELCEYHENLYD-MEVENYLPKGVFSFEKLIKYAEEKTICPYFIVRRMISLCNIIVYSYH 212
Query: 219 YLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID-- 275
YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ +L ++ N ++
Sbjct: 213 YLLDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTNDVLRRA-TKGANALEGR 271
Query: 276 ISSTRRGQSSDETLNPDNFAILRAL-----LLKLEKRIAEVPINSKEL------GFTKPG 324
I R+ S + L + +++ L L E+ E P+ S++L G +
Sbjct: 272 IEEVRKADS--KKLQDEYDKLVQGLHADDILTVAEEPFVETPVLSQDLLKEAIPGNIRRA 329
Query: 325 PYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNIL 378
+ L L +T K++ ++ E LQ K ++K C R+ + L
Sbjct: 330 EHFISFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRFCSERLSLLVRTL 389
Query: 379 KIIFRDKGTAHS--AYYRVHVREADANAADVLK-------GKASRTLSWWCFNPGIAMQE 429
++ + TA A + + + +++ + + + C + IA++
Sbjct: 390 EVTEVEDFTALKDIATFATLISTYEDGFTLIIEPYEIENAAVPNPIMRFSCLDASIAIKP 449
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
+ S+I+TSGT+SP+D + + L L+ + K I+ G ++
Sbjct: 450 VFE-KFSSVIITSGTISPLDMYPRMLNFETILQKSYSMTLDKKSFLPMIITKGSDQVAIS 508
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
S + R+ + G+ +V A+I PDG+++FFPSY M+ ++ W+ + G L +W
Sbjct: 509 SRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQ--TMGILDEVW- 565
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF H GR
Sbjct: 566 ---KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHHYGRT 620
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V++ G+PF ++ + E+L Q + ++ LSF A R Q +
Sbjct: 621 VLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF---------DAMRHAAQCL 667
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
GRV+R + DYG ++ D RF+ +K+Q+ WI
Sbjct: 668 GRVLRGKDDYGVMVLADRRFSR--KKNQLPKWI 698
>gi|224059074|ref|XP_002299703.1| predicted protein [Populus trichocarpa]
gi|222846961|gb|EEE84508.1| predicted protein [Populus trichocarpa]
Length = 918
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 202/726 (27%), Positives = 327/726 (45%), Gaps = 124/726 (17%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRGSAQ-NNACRFL 153
I + SRTHSQL Q I+EL+ + + ++ V LGSR+ CI+ EV L S + N C L
Sbjct: 211 IYFCSRTHSQLSQFIKELRKTLFSNEINVVCLGSRKNFCINEEVLKLGSSVRVNERCLEL 270
Query: 154 CKKGTN--------------RRCN---------HHSRVADYMKNNPHLGDEPIDIEDLVN 190
K N RR H ++ G +DIEDLV
Sbjct: 271 QKNKKNEVSKIKNFSAEGRIRRTKASSGCPMLRKHKLQKEFRNETSQHG--ALDIEDLVR 328
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
IGR+ G CPY+ +R + D+V PY L+ R+ LG+ KNSI++ DEAHNL
Sbjct: 329 IGRSIGTCPYYGSRSMVPAADLVVLPYQSLLSKSSRESLGLNLKNSIIVIDEAHNL---- 384
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDN-------FAILRALLLK 303
AD+ + + ++ + + I+ TR L P N + RA L
Sbjct: 385 ADSLISMYDAKITSSQLESVHSHIEKYFTR----FRNLLGPGNRRYIQTLMVLTRAFLQT 440
Query: 304 LEKRIAEVPIN---SKELGFTKPGP-----YIYELLADLNITQETAYKLIDIVEVAAELL 355
L+ + +N ++E+ K I + L LNI KL+ + +
Sbjct: 441 LDNKKDLSNVNNYQAEEIAADKKAVCDTSIAINDFLFSLNIDNINLVKLL-------QYI 493
Query: 356 QEDKLQNKKSTTACRIESISNILKII----FRDKGTAHSAYYRV--HVREADANAAD--V 407
+E L +K S ++ S+ L + F ++G+ S++ + + N D +
Sbjct: 494 KESNLVHKVSGYGEKVASLQEGLALNRNGEFGEEGSTLSSFRALVDMLMSLTNNDGDGRM 553
Query: 408 LKGKASRTLS-----WWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFP 460
+ K T S + + + FS + E ++IL GTL P++ + L FP
Sbjct: 554 IISKMRSTCSGLQGGFLKYVMLTGEKIFSEIVDEAHAVILAGGTLQPIEETRERL---FP 610
Query: 461 LRVEN-------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
N H++ + I V GPSG + SY +R S+ +ELG + N+
Sbjct: 611 WLPPNQLHFFSCSHIVPPESILPIAVSRGPSGQSFDFSYSSRSSLVMIEELGLLLCNLVA 670
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
VP+G+++FF S+ Q WK + I ERI + K+ EPR +S L +++
Sbjct: 671 FVPEGIVVFFSSFEYEGQVYDSWKKSG------ILERIMRKKRIFREPRSNSDVELILKE 724
Query: 574 YMAKLKDTST---------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
Y + S+ +GAV AV GK+SEG++F+D GR +V+ G+P+ + +D +
Sbjct: 725 YKETIDGLSSGTKEDGVRHNGAVLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSDME 784
Query: 625 VRLKREYLDLQAQSQGGEYKE-------------TKLSFL-----SGEDWYNQQASRAVN 666
+ + +Y++ + G+ E T S L G+++Y +AVN
Sbjct: 785 LMERVKYIESLGEPNCGKRPEISVGEHYYNGDVQTAFSILRSCRRRGKEYYENLCMKAVN 844
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS-------LWIQPH-IQCYSKFGDVVYT 718
Q++GR IRH +DY AI+ D R+A S K+ S LWI+ + + +G+V
Sbjct: 845 QSIGRAIRHINDYAAILLVDMRYASDSSKTSFSHPTNKLPLWIKDRLVSATNNYGEVHRL 904
Query: 719 LTRFFR 724
L +FF+
Sbjct: 905 LHQFFK 910
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y Q+ +M+ + SL ++LESPTGTGKTL ++C+ L W
Sbjct: 6 FPYKPYSIQIDFMKALYHSLNQGGVSILESPTGTGKTLSIICSALQW 52
>gi|324507092|gb|ADY43014.1| TFIIH basal transcription factor complex helicase XPD subunit,
partial [Ascaris suum]
Length = 761
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 193/750 (25%), Positives = 335/750 (44%), Gaps = 103/750 (13%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G++V FP++ Y Q++YME+V ++L + +ALLE P+GTGKT+ LL LA+
Sbjct: 5 VDGLEVYFPYDYIYPEQVLYMEEVKKTLDAQGHALLEMPSGTGKTISLLSLVLAYMLKF- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--------T 116
KL ++Y SRT ++ + ++EL+
Sbjct: 64 --------------------------PDKLDKLIYCSRTIPEIEKCVEELRNLFKYYEQV 97
Query: 117 SNYRPKMVILG--SREQLCIHREVSLLR-GSAQNNACRFLCKKGT--NRRCNHHSRVADY 171
+ RP ++ L +R+ LCI+ V+ LR GSA + AC+ L R+ +
Sbjct: 98 NGKRPALLALAISARKNLCINESVACLRQGSAVDGACQRLTAGFVRAKRKLQPDLPACSF 157
Query: 172 MKNNPHLGDE--PIDIEDLVNI---GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
+ + P + +L N+ G G CPYFM R +I+ Y+Y++DP
Sbjct: 158 FEKFDAQREVVLPAGVYNLSNLRKWGHQKGVCPYFMARANADRANIIVYSYHYILDPKIA 217
Query: 227 KGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSS 285
+ + + + S ++FDEAHN++ +C ++ S L+ + + + +D R + +
Sbjct: 218 ELVSKNFSRRSCVVFDEAHNIDNVCIESMSVSLTKSTVEKAMQKVA-LLDKHVQRLKEEN 276
Query: 286 DETLNPDNFAILRALLLKLEKR-----IAEVPINSKELGFTKPGP------YIYELLADL 334
E L + ++ L + R +A + L PG +I L +
Sbjct: 277 SERLQNEYERLVEGLRQVEQDRANDETLANPVLPDSILQEAVPGSIRTAQHFINFLRRFI 336
Query: 335 NITQETAYKLIDIVEVAAELL---QEDKLQNKKSTTAC--RIESISNILK---------- 379
+ +VE A L QE ++ C R S++ L+
Sbjct: 337 EYLKYRMRSTTVLVESPASFLFDIQERMYIERRPLRFCTERFASLARTLELADISDFHSL 396
Query: 380 IIFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
++ + T S+Y + + + D + D S T+ C + IA++ +
Sbjct: 397 VLVTNFATLVSSYGPGFSLIIEPLDEKSGDA----HSCTMHLNCMDASIAIRPILQ-RFQ 451
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
S+I+TSGTLSP++ + + L + + + I IV G + S + +RD
Sbjct: 452 SVIITSGTLSPLEMYPKILDFDPAVMASLSMTLARPCIAPLIVSKGNDQVAITSRFESRD 511
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
+ GN ++ +A IVPDG+++FF SY M+ ++ W + I + + KHK
Sbjct: 512 DAAVIRNYGNLVLEVASIVPDGVVVFFTSYVYMENVVSIWYDQR------IIDELMKHKL 565
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+E + +A+E Y+ S GA+ F+V RGKVSEG+DF+ H GRAV++ G+P
Sbjct: 566 LFIETTDALETSVALEKYVEACD--SGRGAILFSVARGKVSEGIDFSHHLGRAVIMLGIP 623
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ +R + EYL + G + D+ A R Q VGR +R +
Sbjct: 624 YVYTESRILRARLEYL---REHHG----------IKENDFLTFDAMRHAAQCVGRALRGK 670
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
DYG +IF D+RFA + ++ WIQ ++
Sbjct: 671 TDYGLMIFADKRFAKKDKMGKLPRWIQEYL 700
>gi|313241207|emb|CBY33490.1| unnamed protein product [Oikopleura dioica]
Length = 761
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 185/676 (27%), Positives = 309/676 (45%), Gaps = 107/676 (15%)
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVI--LGSREQLCIHREVSLLRGSAQ- 146
G + I Y SRTHSQL Q ++E++ S ++ + + + SR LC++ +V L +Q
Sbjct: 124 GQEFVEKIFYASRTHSQLSQFVKEIRKSPFKDSVTVAPIASRATLCVNPKVKKLSTVSQM 183
Query: 147 NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTREL 206
N +C+ L K N+ C ++ + ++ + + +DIED V G CP++ RE
Sbjct: 184 NESCKQLNK---NQGCEFKTKKGLSLLSH-RMNNTLMDIEDTVKFGNENKCCPFYGAREA 239
Query: 207 QKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
TVD+ PYN L+ P R+ G+ KNS++I DEAHNL G S ++ LT
Sbjct: 240 LPTVDVCVLPYNLLVVPSARESCGINLKNSVVIIDEAHNLAGAIESCYSVGVTLNALTEA 299
Query: 267 ISEAKNCIDISSTRRGQSSDETLNPDNFAILR---ALLLKLEKRIAEVPINSKELGFTKP 323
+ S R LNP+N ++ A+L+ L K + V NS++ T
Sbjct: 300 YKQLNAYKAKFSAR--------LNPENLMFVKQLLAVLIGLGKDLKRVN-NSEQKIVT-- 348
Query: 324 GPYIYELLADLNITQETAYKLIDIV--EVAAELLQ--EDKLQNKKSTTACRIESISNILK 379
+ E+L D + ++L+ + + A ++ DK+ N T ++ N LK
Sbjct: 349 ---VREILNDAKLDNINLFELLKYMTKSLIAHKVKGFADKVAN---TPKVIVKPKENALK 402
Query: 380 IIFRDKGTAHSAYYRVHVR---EADA---------------------------------N 403
+ G + Y++ E DA N
Sbjct: 403 EMLTKNGKKKN--YKIEAEPEPEIDAKKKIPNFQLGALVQVEIFLAVLITPGADLRIIKN 460
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-------K 456
A D GKA + + NP E S+ + S++L GT+ P + +L K
Sbjct: 461 AND---GKAQ--MKVFLLNPASIFAEISK-DARSVLLAGGTMKPYQTLKDQLFAEVSSEK 514
Query: 457 LNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
L++ HVI+ Q+ A ++ GP+ ++ N+D+ KQ+LG +V+I + VP
Sbjct: 515 LSW---FNCEHVISDSQMNALVLQRGPTNERFIFNHSNKDNFAMKQDLGRALVDIVQTVP 571
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
G+++FF SY +K + ++I K EP++++ +E Y
Sbjct: 572 SGVVVFFASYKQETMFYEMFKKSG------FLQQIENVKTLFREPKETAGVAPLLEKYEM 625
Query: 577 KLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
++ GA+ FAV GKVSEG++F+D RAV++ G+P+ + +++L+ + L+ +
Sbjct: 626 SVR---VRGAILFAVVGGKVSEGINFSDGLCRAVIMIGVPYPDIKSAEIKLRMDTLN--S 680
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
+ GG G+ Y RAVNQ VGR IRHR D I+FCD R++ P +
Sbjct: 681 KRPGG-----------GQMLYTGLCMRAVNQCVGRAIRHRDDSSLILFCDVRYSEPRVRD 729
Query: 697 QISLWIQPHIQCYSKF 712
+ WI+ + Y F
Sbjct: 730 HLPDWIKTRLTSYDNF 745
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 32/48 (66%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ 72
M+ + +++++ + ESPTGTGK+L ++C+ + W K + + LG+Q
Sbjct: 1 MKAIYTAIEDRKIGIFESPTGTGKSLSIICSAIKWLKDHRNRAELGTQ 48
>gi|380016559|ref|XP_003692248.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Apis
florea]
Length = 856
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 187/689 (27%), Positives = 325/689 (47%), Gaps = 89/689 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I + SRTHSQL Q I+ELK S Y + V L SR+ C+++ V L+ + N C L
Sbjct: 192 IFFCSRTHSQLSQFIEELKKSPYSKNISVVTLTSRQNYCVNKNVKKLKHLNLINECCLQL 251
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHL-GDEPI----------DIEDLVNIGRTFGPCPYFM 202
+K T + + N P + G++ + DIE++V G + C Y+
Sbjct: 252 QRKKTTVKDEKDLKRRKIAINCPFIPGNQDLLLGEILIQIQDIEEIVQKGESLKTCTYYA 311
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
+R+ ++ PYN ++ R LG+ K ++LI DEAHNL S ++
Sbjct: 312 SRKAIPYSQLILVPYNSILHKNTRISLGINLKGNVLIIDEAHNLLEAIEKMHSVVITGRN 371
Query: 263 LTACISE-------------AKNCIDISS---------TRRGQSSDETLNPDNFAILRA- 299
L C S+ AKN + +S T G ++ NPD+F ++
Sbjct: 372 LLHCYSQLCQYQKRFQNLFSAKNVLSLSQLNFCLRKLLTVLGATTKS--NPDDFIDVKIS 429
Query: 300 -LLLKLEKRIAEV-PINSKEL-GFTKPGPYIYELLADLNITQETAYKLIDIVEVAA---E 353
L K+E+ + E+ +N EL F K ++L + +T K+ D +
Sbjct: 430 PKLYKIEEIMTEIDTVNIFELLKFIKNSQLCHKLQGFIE-QYDTNLKIHDYNTKTCGIKQ 488
Query: 354 LLQEDKLQNKKSTTACRIES---ISN--ILKII-FRDKGTAHSAYYRVHVREADANAADV 407
L K ++ +S IES SN I+ I+ F + S+ R+ V +
Sbjct: 489 FLNSIKTKDIESDVITNIESNEEQSNNPIIAIVNFLECLQNCSSDGRISVIPGPTVGQSI 548
Query: 408 LKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF---PLRVE 464
+K + NP I + R + ++IL GT++PM+ F ++L + P R+
Sbjct: 549 MK--------FLLLNPAIHFHDIVR-DARAVILAGGTMAPMNEFIEQLFIAAGAAPERII 599
Query: 465 N---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
HVI + I I+ GP+G +++NR++ + ELG T++N++ I+P G+++
Sbjct: 600 TFSCDHVIPEENIICNIITHGPTGIEFEFNFQNRENTKLLDELGRTLLNLSNIIPAGIVV 659
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK-- 579
F PSY + +K H + I ++ K + EP+ +S +E Y +K
Sbjct: 660 FLPSYNFEE---LVYK---HLEKSGIIAKLSLKKHILREPKLASQVNKILEQYSFYIKQP 713
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
S +G++ F+V GK+SEGL+F+D GR +++ GMP+ + +++ K +YL+ +
Sbjct: 714 QNSQNGSLLFSVVGGKLSEGLNFSDDLGRCIIVVGMPYPNIKSLELQEKMKYLNENIKPD 773
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
+G+++Y +AVNQ +GR IRH +DY +I D+R+ H ++ +
Sbjct: 774 ------------AGQNFYENSCMKAVNQCIGRAIRHINDYSTVILLDKRYIHKTK--VLP 819
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFFREERI 728
WIQ + + FG ++ L +FF +++I
Sbjct: 820 HWIQRTLMIHKTFGGMIGNLAKFFNKKKI 848
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW-----RKSLGSFS 67
FPF Y Q +M+++ + L+N + ESPTGTGK++ ++C L W + +
Sbjct: 9 FPFSPYLIQNQFMKELYKCLENAKLGIFESPTGTGKSMSIICGALKWLLDYEEQQRNQLT 68
Query: 68 TLGSQVNNQISG-SQSSVN 85
T S+++ QI + SS+N
Sbjct: 69 TAISELDQQIKQYNNSSIN 87
>gi|390597969|gb|EIN07368.1| DNA repair helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 796
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 204/785 (25%), Positives = 357/785 (45%), Gaps = 125/785 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FHIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
+ L +Y SRT ++ + + ELK YR
Sbjct: 63 YPTKRKL----------------------------IYCSRTVPEIEKALSELKRLMEYRI 94
Query: 122 KMVI---------------LGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKG--- 157
+ L SR+ LCIH EVS +G + CR L C++G
Sbjct: 95 ECAETEEEKEKERNFSGLGLTSRKNLCIHPEVSKEKKGKVVDARCRDLTNSAVCERGRAE 154
Query: 158 --TNRRCNHHSRVADYMKNN---PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
+ C H ++++ N P + + D++ GR G CPYF R + VD+
Sbjct: 155 PGSVELCTFHEKLSEREPGNLIPPGIWT----LADVLQYGRDQGTCPYFTVRRMMPFVDV 210
Query: 213 VFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC----- 266
+ ++YL+DP + + E K++I++FDEAHN++ +C ++ S DL+ +L +
Sbjct: 211 IIYSFHYLLDPKVAEQVSKELSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSASRSVI 270
Query: 267 -----ISEAKNCIDISSTRR---------GQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
I E K D S + +++DE + D F L L K
Sbjct: 271 RLGEKIEEIKKT-DASKLQDEYAKLVEGLQETTDEQSDEDAFVTSPVLPDDLLKEAIPGN 329
Query: 313 INSKE--LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQN- 362
I E + F K Y+ + L++ ET + DI + L+ ++LQ+
Sbjct: 330 IRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSL 389
Query: 363 KKSTTACRIESISNILKII-FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCF 421
++ RI+ S++ K+ F + + + + + + + A V + C
Sbjct: 390 VRTLELTRIDEYSSLQKVASFATLVSTYEKGFLLILEPFETDNATV----PNPMFHLTCL 445
Query: 422 NPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP 480
+P IA++ F R S+I+TSGT+SP+D + + L+ ++ P +T ++
Sbjct: 446 DPAIAIKPVFERF--SSVIITSGTISPLDMYPKMLQFTPVVQETYPMTLTRNAFLPLVIT 503
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
G ++S + R+ + G+ +V ++IVPDG++ FFPSY M+ +A W +
Sbjct: 504 RGSDQVAVSSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVAFFPSYLYMESIVAAWNDM- 562
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
G L +W K+K VE ++ +A+E+Y + GAV +V RGKVSEG+
Sbjct: 563 -GILNEVW----KNKLIFVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSEGI 615
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DF + GRAV++ G+P+ ++ + EYL + + E+ L F
Sbjct: 616 DFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LGF---------D 662
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYT 718
A R Q VGRV+R + D+G +IF D+RFA +++++ WI +I + S D+ T
Sbjct: 663 AMRNAAQCVGRVLRGKTDWGLMIFADKRFARADKRAKLPKWINQYITETASNLSTDMALT 722
Query: 719 LTRFF 723
L++ F
Sbjct: 723 LSKLF 727
>gi|15220007|ref|NP_178107.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
gi|12324592|gb|AAG52253.1|AC011717_21 putative helicase; 55525-51977 [Arabidopsis thaliana]
gi|332198199|gb|AEE36320.1| chromosome transmission fidelity protein 1 [Arabidopsis thaliana]
Length = 882
Score = 223 bits (567), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 196/723 (27%), Positives = 319/723 (44%), Gaps = 117/723 (16%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ-NNACRFL 153
+ + SRTHSQL Q ++EL+ + + + K+V LGSR+ LCI+ +V L + N C L
Sbjct: 185 VFFCSRTHSQLSQFVKELRKTVFAKKLKVVCLGSRKNLCINEDVLKLGNVTRINERCLDL 244
Query: 154 CKK-----------GTNRRC------------NHHSRVADYMKNNPHLGDEPIDIEDLVN 190
KK G N R H ++ + E +DIEDLV
Sbjct: 245 QKKKISQVSKKKNLGANVRIVRTKASCRCPMLRKHKLQREFKAES--FQQEAMDIEDLVQ 302
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+GR CPY+ +R + D+V PY L+ R+ LG+ KNS++I DEAHNL
Sbjct: 303 LGREMRTCPYYGSRRMAPAADLVILPYQSLLSKSSRESLGLSLKNSVVIIDEAHNL---- 358
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA- 309
AD + LT E +C S R Q+ N I+ L K +A
Sbjct: 359 ADTL-LSMHDAKLTVSQLEDIHCSIESYLGRFQNLLGAGNRRYIQIMLILTRAFLKPLAS 417
Query: 310 EVPINSKELGFTKPGP-----------YIYELLADLNITQETAYKLIDIV---------- 348
+ ++S +G P IY+ L LNI KL+ +
Sbjct: 418 DRNLSSVNVGLDTENPSKSKPCGACSMAIYDFLFSLNIDNINLVKLLAYIKESNIIHKVS 477
Query: 349 ---EVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAA 405
E A +LQ+D + +++ + + S++L + + G + +
Sbjct: 478 GYGERVAAMLQKDPVAHEEMSKLTSFRAFSDMLVALTNNNGDGRIII---------SRTS 528
Query: 406 DVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN 465
G+ + + E E ++IL GTL P++ + L FP N
Sbjct: 529 SSTSGQHGGYIKYVMLTGAKLFSEVVD-EAHAVILAGGTLQPIEETRERL---FPWLPSN 584
Query: 466 -------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
H++ + I V GPSG + S+ +R SI QELG + N+ +VP+G
Sbjct: 585 QLQFFSCSHIVPPESIMPIAVSHGPSGQSFDFSHSSRSSIGMIQELGLLMSNLVAVVPEG 644
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
+++FF S+ Q W N+ I RI K K+ EPR+++ + DY +
Sbjct: 645 IIVFFSSFEYETQVHTAWSNSG------ILRRIVKKKRVFREPRKNTEVEAVLRDYKEAI 698
Query: 579 KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
+ S GA+ AV GKVSEG++F+D R VV+ G+P+ + +D ++ + ++++ +A S
Sbjct: 699 E--SERGAIMLAVVGGKVSEGINFSDSMCRCVVMVGLPYPSPSDIELLERIKHIEGRADS 756
Query: 639 QGGEYKETKL--SFLSGE----------------DWYNQQASRAVNQAVGRVIRHRHDYG 680
+ T + S+ SG+ ++Y +AVNQ++GR IRH DY
Sbjct: 757 DSIKPSVTLVDDSYYSGDVQAGFGVLKSCKRRGKEYYENLCMKAVNQSIGRAIRHEKDYA 816
Query: 681 AIIFCDERF----------AHPSRKSQISLWIQPHIQCYSK-FGDVVYTLTRFFREERIC 729
+I+ D R+ +HPS K + WI+ + +K +GDV L +FF+ + +
Sbjct: 817 SILLVDARYSNDPSKRTSHSHPSNK--LPKWIKDRLIYSTKGYGDVHRLLHQFFKHKNVE 874
Query: 730 GST 732
S+
Sbjct: 875 NSS 877
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y Q+ +M + Q L ++LESPTGTGK+L ++C+ L W
Sbjct: 10 FPYKPYSIQIDFMNALYQFLDKGGVSMLESPTGTGKSLSIICSALQW 56
>gi|403216750|emb|CCK71246.1| hypothetical protein KNAG_0G01890 [Kazachstania naganishii CBS
8797]
Length = 773
Score = 223 bits (567), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 202/755 (26%), Positives = 341/755 (45%), Gaps = 116/755 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYHYMCDIKRTLDAGGNSILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H V R G+ + CR L G N+R
Sbjct: 95 KELGHAEEFRGLGLTSRKNLCLHPVVRKERKGTVVDEKCRRLTN-GVNKRKLEEDPNAEV 153
Query: 162 --CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
C +H + D N +L + E L+ CPYF+ R + +I+ Y+Y
Sbjct: 154 ELCAYHENLYDLDVEN-YLPNGVFSFEKLIKYCEEKTLCPYFIVRRMISMCNIIIYSYHY 212
Query: 220 LIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS 278
L+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ +L ++ N ++
Sbjct: 213 LLDPKIAERVSREVSKDSIVIFDEAHNIDNVCIESLSLDLTNDVLRRA-AKGANSLE-EK 270
Query: 279 TRRGQSSDETLNPDNFAILRALLLKL------EKRIAEVPINSKEL------GFTKPGPY 326
+ +S D T D ++ L L + E+ E P+ S++L G + +
Sbjct: 271 VQEVRSVDATKLQDEYSKLVQGLHMVDIVPAQEETFVETPVLSEDLLTEAIPGNIRRAEH 330
Query: 327 IYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI 380
+ L +T K++ ++ E LQ K ++K C R+ + L++
Sbjct: 331 FVSFMKRLIEYLKTRMKVLHVISETPKSFLQHLKHLTFIDRKPLRFCSERLSLLVRTLEV 390
Query: 381 IFRDKGTAH----------SAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAM 427
+ TA S Y +++ + + A V + + + C + IA+
Sbjct: 391 TEVEDFTALKDIATFATLISTYEDGFQLIIEPYEIENAAV----PNPIMRFTCLDASIAI 446
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYL 487
+ S+I+TSGT+SP+D + + L L+ + K IV G
Sbjct: 447 KPVFE-TFSSVIITSGTISPLDMYPKMLNFETVLQKSYAMTLAKKSFLPMIVTKGSDQVA 505
Query: 488 LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTI 547
++S + R+ + G+ +V A+I PDG+++FFPSY M+ ++ W+ + G L +
Sbjct: 506 ISSRFEIRNDPSIVRNYGSMMVEFAKITPDGMVVFFPSYLYMESIVSMWQ--TMGILDEV 563
Query: 548 WERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
W KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF G
Sbjct: 564 W----KHKLILVETPDAQETSLALETYRKAC--SNGRGAILMSVARGKVSEGIDFDHQYG 617
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
R V++ G+PF ++ + E+L Q + ++ LSF A R Q
Sbjct: 618 RTVLMIGIPFQYTESRILKARLEFLRENYQIKENDF----LSF---------DAMRHAAQ 664
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+GRV+R + DYG ++ D RFA +KSQ+ WI
Sbjct: 665 CLGRVLRGKDDYGVMVLADRRFAR--KKSQLPKWI 697
>gi|451852903|gb|EMD66197.1| hypothetical protein COCSADRAFT_137550 [Cochliobolus sativus
ND90Pr]
Length = 860
Score = 223 bits (567), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 197/708 (27%), Positives = 319/708 (45%), Gaps = 99/708 (13%)
Query: 85 NSSQSGDSKLPT---ILYTSRTHSQLRQVIQELKTSNYRP-------------------- 121
++ ++ D ++P I + SRTHSQL Q EL P
Sbjct: 187 DAPKNDDGEVPDETKIFFCSRTHSQLTQFSSELGRVKMPPAIALDDDTNSADTDSLVEDI 246
Query: 122 KMVILGSREQLCIHREVSLL-RGSAQNNACRFLCKKG-TNRRCNHH-SRVADYMKNN--P 176
K + LGSR+ LCI+ +V+ L +A N C L + T RC H S+ ++ + N+
Sbjct: 247 KHLTLGSRKNLCINDKVNKLGSATAINERCLELQQNSSTESRCPHMPSKESEPLINDFRD 306
Query: 177 HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
H + DIEDL ++G+ G CPY+ +R K +IV PY L+ R+ LG+ K+
Sbjct: 307 HALAKIRDIEDLGSLGKKLGVCPYYASRPATKYCEIVTLPYPLLLQRTAREALGLSLKDH 366
Query: 237 ILIFDEAHNLEGICADAASFDLSSG-------LLTACISEAKNCIDISSTRRGQSSDETL 289
++I DEAHNL A S ++ G LTA + + +N + + +
Sbjct: 367 VVIIDEAHNLMDAIAGIYSVSVTLGQVQQARAQLTAYLQKFRNKL--------KGKNRVY 418
Query: 290 NPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL-NITQETAYKLIDIV 348
IL ++L L+ A+ P + L D+ +I I++
Sbjct: 419 VAQTVRILDSILAYLQSIDAD--------------PKATDGLVDMVSIMSGKGVDQINVF 464
Query: 349 EVAAELLQEDKLQNK-KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE-----ADA 402
++ A LQE +L K TA +++ K + + KG HS +HV+ +
Sbjct: 465 KLNA-YLQESRLARKVDGYTAYAEQTVDEPTKQVSK-KGPRHSVPVLMHVQAFLLSLMNP 522
Query: 403 NAADVL---KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
+A K TL + +P ++ E +++L GT+SPM + Q L L++
Sbjct: 523 SAEGRFFYSKEDGVTTLRYMLLDPTFHFKDIVE-EARAVVLAGGTMSPMSDYKQHL-LSY 580
Query: 460 --PLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
P +++ HVI + A V SG + ++ NR+ + +LG I R
Sbjct: 581 LDPSKIKTLSCGHVIPPSNLLAVPVVRATSGAEFDFTFENRNKEKTMNDLGAAISAFTRD 640
Query: 515 VPDGLLIFFPSYYLMDQCIACWK--NTSHGNLTTIWERICKHKKPVVEPRQSSLFPL--- 569
+PDG+++FFPSY +D CIA WK S N TT W+ K+ KPV ++S L
Sbjct: 641 IPDGVVVFFPSYSYLDTCIAAWKRLKPSQSN-TTFWDTF-KNSKPVFLEQRSQQQNLDAS 698
Query: 570 ----------AIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
+ Y + + GA+ FAV G +SEG++F+D GR VV+ G+PF
Sbjct: 699 SAVKEGAVDSVLNAYSTAIACGNGRGALLFAVIGGTLSEGINFSDALGRGVVVVGLPFPN 758
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ + K +Y+ + GG+ K + ++Y R+VNQ VGR IRH+ DY
Sbjct: 759 AHSAEWKAKMQYIAAKEAKNGGDGKA------AAREFYENACMRSVNQCVGRAIRHKGDY 812
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
AI+ D R+ + ++ WI+ + DV L FF +++
Sbjct: 813 AAILMLDRRYGSKRIQDKLPKWIRGSLTGGLGMRDVEGKLGGFFADKK 860
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 5 KIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
K +D P+ YD Q +M V + L+N + ESPTGTGK+L L+C +L W
Sbjct: 4 KTEQLDFHHPYTPYDIQNEFMSAVYECLENGQVGIFESPTGTGKSLSLICGSLTW 58
>gi|58264204|ref|XP_569258.1| CHL1 helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223908|gb|AAW41951.1| CHL1 helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 849
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 191/701 (27%), Positives = 315/701 (44%), Gaps = 106/701 (15%)
Query: 97 ILYTSRTHSQLRQVIQEL-KTS----------------NYRPKMVILGSREQLCIHREVS 139
+ YTSRTH+QLRQ+ EL KTS ++ +V LGSR+QLCI+ +V
Sbjct: 190 VYYTSRTHTQLRQLTSELLKTSFASYDSVPESSSAEAPSHGVSLVPLGSRKQLCINEKV- 248
Query: 140 LLRGSAQNNACRFLCKKGTNRRCN------HHSRVAD---YMKNNPHLGDEPIDIEDLVN 190
R L + G + R N S AD + + DIED+V
Sbjct: 249 -----------RALARNGGDERMNEACLDMQKSAKADEITMLDARDTILASVKDIEDIVT 297
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ TR+ K IV PYN L+ + LG++ KN +++ DEAHNL
Sbjct: 298 MGKKSCVCPYYATRKAVKQSQIVTLPYNLLLQKNSHEALGIKLKNQVVVIDEAHNLIDTL 357
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDN-------FAILRALLLK 303
L+S L +S+ + + +R L P + ++L+ L+
Sbjct: 358 LSIHCTTLTSTNLANAVSQLQQYLQRFKSR--------LKPIHSLWIQQILSLLQGLIRV 409
Query: 304 LEKRIAEVPINSKELGFTKP-GPYIYELLADLNITQETA--YKLIDIVEVAAELLQEDKL 360
+K + +KE +KP G E+L N+ ++ +E+ A L+E +L
Sbjct: 410 CDKFFQDAKSQTKE---SKPVGKPKVEVLDVNNLMGRIGGGSDQVNPIELLA-YLKESRL 465
Query: 361 QNKKSTTACRIESISNILKIIFRDKGTA-HSAYYRVHVREA------DA--------NAA 405
K S + + + + TA H++ H E+ DA +
Sbjct: 466 ARKISGFSEHVAEQAALKDAKTSRSATARHASIAAFHNVESFLLSLVDAKDDGRIILSID 525
Query: 406 DVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL---- 461
D+ K + + + NP +E E S+IL GT+ P+ F Q+L + P
Sbjct: 526 DLDKSEPVVVIKYVLLNPSERFKEVVE-EARSVILAGGTMEPITDFLQQLFPSIPKDRLS 584
Query: 462 RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
+ HVI + + +V VGP + NR+ +LG + +VPDG+++
Sbjct: 585 TLSCSHVIPKENLLTQVVSVGPRKSEFEFKFGNRNDEALLTDLGAVLQATIGVVPDGVVV 644
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD- 580
F PSY +D+ A W + + +R+ + K+ EP+ S + DY +
Sbjct: 645 FLPSYAFLDKVRAFWTKSG------LLQRLGERKQLFYEPQTSGDVETILRDYALAISSC 698
Query: 581 --TSTSG-------AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY 631
TSTSG A+ FAV GK+SEG++F+D+ GR V++ G+PFA ++ +++ + Y
Sbjct: 699 YATSTSGQKSRKTGALMFAVVGGKLSEGINFSDNLGRCVIMVGLPFANVSSVELQERMRY 758
Query: 632 LDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAH 691
++ + G +E Y RAVNQ++GR IRH +DY I+ D+R+A
Sbjct: 759 VETVPGAGQGASRE----------MYENLCMRAVNQSIGRAIRHANDYATILLVDKRYAT 808
Query: 692 PSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGST 732
++++ WI ++ FG V + FF+E++ G T
Sbjct: 809 SRIRNKLPKWIGKDVKVPQDFGGVARGVAAFFKEKKDRGLT 849
>gi|358383392|gb|EHK21058.1| hypothetical protein TRIVIDRAFT_59546 [Trichoderma virens Gv29-8]
Length = 872
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 187/691 (27%), Positives = 315/691 (45%), Gaps = 93/691 (13%)
Query: 97 ILYTSRTHSQLRQVIQELK-----------------TSNYRP-KMVILGSREQLCIHREV 138
I YTSRTHSQL Q I EL+ S+ P K++ L SR++LCI+ V
Sbjct: 206 IYYTSRTHSQLSQFITELRRPVFPSSLPPSVAKGSDVSSTEPVKLLPLSSRQKLCINPSV 265
Query: 139 SLLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIG 192
+ L GS Q N+ C L + ++ +C+ + + + D + DIEDL +G
Sbjct: 266 ARL-GSVQAINDRCTELQQAKSSTKCSFVPK-EELLSQTHQFRDSALATLPDIEDLHLLG 323
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
++ CPY+ +R +I+ PY L+ R+ LG++ + +++I DEAHN+ D
Sbjct: 324 KSLSICPYYASRVALPGAEIITLPYPLLLQRSAREALGIKLEGNVVIIDEAHNI----LD 379
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
A S ++ L + + + + + R G+ + +N N + ++ L + +
Sbjct: 380 AISNVHAAELQLSDLRRGRQMLGVYVKRFGKKL-KGINRVNVGRVGRVIDGLSEWLEGAL 438
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE 372
E G P +L I Q Y+LI + +QE KL K + +E
Sbjct: 439 KLKNEHGIVDPN----DLTRHKGIDQINIYELI-------QYIQESKLAYKIESYVAHVE 487
Query: 373 SISNILKIIFRDKGTA--H------------SAYYRVHVREADANAADVLKGKASRTLSW 418
S K GT H + R+ ++ ADV L++
Sbjct: 488 SEGENKKPGLSKAGTPVLHMLVSFLIALTNLGSEGRIFYQKTQGATADV-------KLTY 540
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP--------HVIT 470
+P A + ++IL GT+SP + +L FP ++N HVI
Sbjct: 541 LLLSPTHAFSSIAS-SARAVILAGGTMSPFQDYKDQL---FPT-LDNTKVTSLSCGHVIP 595
Query: 471 SKQ--IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
++ +W + S+++R + E +LG I+N+ IVPDG+++FFPSY
Sbjct: 596 AENLCVWT-LASTNTESPPFEFSFKHRGNKEMMNQLGLAILNVCNIVPDGVVVFFPSYGY 654
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT-----ST 583
+D+ IA W+ G+ T W+R+ + +K V + + DY + T
Sbjct: 655 LDEIIAVWQQRQGGSSQTTWDRL-QARKFVFRDTKGESSEEVLRDYSEAILGTRPAGDKH 713
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ---- 639
+GA+ +V GK+SEG++F+D GR V++ G+P+ + P + K EY++ +++
Sbjct: 714 TGALLLSVVGGKMSEGINFSDRLGRCVMVVGLPYPNIASPDWKAKLEYIESTTEARLIKE 773
Query: 640 -GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
T + + D+Y RAVNQ++GR IRHR DY AII D R+ P ++++
Sbjct: 774 GQSSSDATAQAKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIILVDRRYGTPRIRNKL 833
Query: 699 SLWIQPHIQCYSK---FGDVVYTLTRFFREE 726
WIQ +Q S G ++ L FFR++
Sbjct: 834 PGWIQNGLQQDSHEKGLGVLMGALGGFFRKK 864
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCN--ALLESPTGTGKTLCLLCATLAW 59
+++ +D PF YD Q +M+ V Q L+ +LESPTGTGK+L L+CA+L W
Sbjct: 12 HELSSLDFHHPFTPYDVQNQFMQTVYQVLETGQGQVGILESPTGTGKSLSLICASLTW 69
>gi|389748846|gb|EIM90023.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 802
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 201/781 (25%), Positives = 360/781 (46%), Gaps = 120/781 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FFIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
+ L +Y SRT ++ + + EL+
Sbjct: 63 FPTKRKL----------------------------IYCSRTVPEIEKALAELRRLMEYRI 94
Query: 116 ----TSNYRPKM-----VILGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKG--- 157
T R K + L SR+ LCIH EVS +G + CR + C+KG
Sbjct: 95 SQAETEEQRVKEQGFMGIGLTSRKNLCIHPEVSKEKKGKVVDARCRDMTNSAACQKGRAN 154
Query: 158 --TNRRCNHHSRVADYMKNN---PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
+ C+ H ++ + N P + + D+++ GR G CPYF R + VDI
Sbjct: 155 PGSVDLCDFHEKLGEREPGNLIPPGIWT----LADVMDYGRQQGTCPYFTVRRMLPFVDI 210
Query: 213 VFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC---IS 268
V ++YL+DP + + E K+SI++FDEAHN++ +C ++ S DL+ +L + ++
Sbjct: 211 VIYSFHYLLDPKVAEQVSKEMSKDSIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVN 270
Query: 269 EAKNCID-ISSTRRGQSSDETLN---------PDNFAILRALLLKLEKRIAEVPINSKE- 317
+ + ID I T + DE D A + +L + +P N ++
Sbjct: 271 KLGDKIDEIKKTDASKLQDEYAKLVEGLQDAASDEDAFMSNPVLPEDLLNEAIPGNIRKA 330
Query: 318 ---LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQN-KKST 366
+ F K Y+ + L++ ET + DI + L+ ++LQ+ K+
Sbjct: 331 EHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLVKTL 390
Query: 367 TACRIESISNILKII-FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
R++ S + K+ F + + + + + + + A V + + C +P I
Sbjct: 391 EINRLDEFSALQKVASFATLVSTYEKGFLLILEPFETDNATV----PNPIFHFTCLDPAI 446
Query: 426 AMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
A++ F R S+++TSGT+SP+D + + L+ ++ +T ++ G
Sbjct: 447 AIKPVFERF--SSVVITSGTISPLDMYPKMLQFTPVVQETYAMTLTRNAFLPLVITRGSD 504
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
++S + R+ + G+ +V ++IVPDG++ FFPSY M+ +A W + G L
Sbjct: 505 QVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GIL 562
Query: 545 TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W KHK VE ++ +A+E+Y + GAV +V RGKVSEG+DF
Sbjct: 563 NEVW----KHKLIFVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSEGIDFDH 616
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
+ GRAV++ G+P+ ++ + EYL + + E+ L F A R
Sbjct: 617 NYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LGF---------DAMRN 663
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI--QCYSKFGDVVYTLTRF 722
Q VGRV+R + D+G ++F D+RFA +++++ WI +I + D+ TL++
Sbjct: 664 AAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETAANLSTDMALTLSKL 723
Query: 723 F 723
F
Sbjct: 724 F 724
>gi|290991586|ref|XP_002678416.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284092028|gb|EFC45672.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 902
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 187/675 (27%), Positives = 314/675 (46%), Gaps = 80/675 (11%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNYRPKMVI--LGSREQLCIHREVSLLR----GSAQN- 147
P I+Y SRTHSQL Q +QEL+ + + K+ + + SR+ LC + +V L R G+ QN
Sbjct: 240 PKIIYCSRTHSQLNQFVQELRKTEFSKKVRVSNIASRQVLCNNEDV-LYRKTKNGNIQNS 298
Query: 148 -NA----CRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFM 202
NA C++L K N S D+M H DIEDL+++G+ C YF
Sbjct: 299 LNAINEKCQYLRDKKACSYDNDPSLFKDHMTVKVH------DIEDLLDLGKRLKICSYFG 352
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVE-WKNSILIFDEAHNLEGICADAASFDLSSG 261
TR+ +++ PYN LI RK LG+ K+ ++I DEAHNL S +L
Sbjct: 353 TRKALPISELICMPYNSLIHEQTRKSLGISTLKDCVVIIDEAHNLINAIHQMHSVELDIT 412
Query: 262 LLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLE--KRIAEVPINSKE-L 318
L ++E N R S+++T I+ ++ L K+ + + I + E
Sbjct: 413 QL-YLVNETLNSYYTKFKNRLSSTNQTNINRLLTIINNMITYLNTVKKPSTLNIIADEGT 471
Query: 319 GFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNIL 378
G G +I + ++ ET I++ ++A E +++ L K + R +S +N
Sbjct: 472 GSNDIGGFIVSIT---DLVFETKLDNINLFDIA-EFIEKSDLTKKLNMFMERQDS-NNQT 526
Query: 379 KIIFRDKGTAHSAYYRVHVR-EADANAADVLKGKASRT--------LSWWCFNPGIAMQE 429
I +K + Y +V+ A + DV K T + + NP + Q
Sbjct: 527 VTIHNNKTVKRNNYSANYVQYNATKPSIDVSKIITPATSNIAVNNFIKFLLLNPSVYFQS 586
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE---------NPHVITSKQIWAGIVP 480
+ E S+ILT GT+ P+ Q++ FP + E + H++ +
Sbjct: 587 ILK-EARSVILTGGTMEPIQQLIQQV---FP-KTESSKIHIYQCDKHIVPQNHFLPIALS 641
Query: 481 VGPSGYLLNSSYRNRDSIE-YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNT 539
G +L+ +++NR + + LG IVN+ IVPDG+++FFPSY WKN
Sbjct: 642 KGVDDIVLDFTFKNRQKNDALTKSLGKMIVNLCNIVPDGVVLFFPSYQYEKTVFEYWKNN 701
Query: 540 SHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK--------DTSTSGAVFFAV 591
I +I K KK + E + ++E + + K ++ +G+V V
Sbjct: 702 G------IIGQIEKKKKFLREASTNEEPNSSLEKILQEYKKIIDHNFGNSRYNGSVLSCV 755
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
GK+SEG++F+D GR +++ GMP+ TDP++ ++ + + + GEY
Sbjct: 756 VGGKLSEGINFSDGYGRLIIVVGMPYPNTTDPELVEQQNFFEKTTKVSKGEY-------- 807
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
+ VNQ++GR IRH DY ++ D+R+ +++S WI+ +Q
Sbjct: 808 -----LDNLCMNGVNQSIGRAIRHSKDYATVLLLDKRYHQSRLTNKLSKWIRKGVQIQDS 862
Query: 712 FGDVVYTLTRFFREE 726
FG V ++ +FF+E+
Sbjct: 863 FGKSVNSIEQFFKEK 877
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 13 FPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+E YD Q YME++ ++Q+ + ESPTG+GK+L L+C L+W
Sbjct: 46 FPYEKPYDIQQQYMEQLFDTIQSGKVGIFESPTGSGKSLSLICGALSW 93
>gi|396081490|gb|AFN83106.1| Rad3/XPD DNA repair helicase [Encephalitozoon romaleae SJ-2008]
Length = 743
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 210/793 (26%), Positives = 345/793 (43%), Gaps = 149/793 (18%)
Query: 5 KIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
+I + V FP+++ Y QL YM ++ +SL N+ + LLE P+GTGKT+ LL T++++ +
Sbjct: 4 QIDEVLVYFPYDSVYPEQLKYMREIKRSLDNRGHCLLEMPSGTGKTVALLSMTISYQLHM 63
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-----TSN 118
+ N+ I+Y SRT ++ + ++EL
Sbjct: 64 KA-------KNDHFK------------------IVYCSRTVPEVEKALRELDGVVSYIKK 98
Query: 119 YRPKMVI---LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNN 175
+RP + L R+ LCI++ + + ACR L + RC D+ +N
Sbjct: 99 HRPIEFLGLGLTGRKNLCINKVA--FKSFNVDVACRRLVNRLGESRC-------DFYENL 149
Query: 176 PHLGDEPIDIED---LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVE 232
+ + P+ + D L IG G CPY++ R D + PYNYLIDP + E
Sbjct: 150 NNFNEVPVAVYDFSRLKEIGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRIYSIVSKE 209
Query: 233 WK-NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNP 291
NS++IFDEAHN++ C + S ++ +L KN ++ + + +E+
Sbjct: 210 LGPNSVVIFDEAHNIDSHCIEVLSIEIKRNILEGATRAIKNLENLLRQKGPTTGEES--- 266
Query: 292 DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA 351
A K++++I E P+ F G YE + +Y I ++
Sbjct: 267 -------AQYEKMKEKIRE-PVADSIPYFYATGEGSYEFIPG---NLRNSYHFISALKRI 315
Query: 352 AEL---------------------LQEDKLQNKKSTTAC--RIESISNILKI-------- 380
E ++E KK+ C R+ +S L +
Sbjct: 316 TEFFKTKLKTTHLTTESTESFCKSIKELSFIGKKALRFCSQRLGMLSQSLGLDDEDMTHL 375
Query: 381 -IFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEV 435
D T S Y + V D+ A+ V + TL C + IAM F+R
Sbjct: 376 KTVADFSTMVSMYSKGFVVIFEPFDSQASTVF----NPTLRLACLDSSIAMSSVFARFR- 430
Query: 436 GSIILTSGTLSPMDSFAQELKLNF-PLRVE-----------NPHVITSKQIWAGIVPVGP 483
++I+TSGT+SP+D + + LNF P R +P +IT + +
Sbjct: 431 -NVIITSGTMSPIDMYPK--ILNFVPSRTAEIGATLERNSISPLIITKGNDQMTLRALSE 487
Query: 484 --------SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
+ +L +S+ R + G+ ++ ++R+VPDG++ FFPSY M++ ++
Sbjct: 488 DIETTDKCNSDMLTTSFSLRSDPSVVRNYGHLMIELSRVVPDGIVCFFPSYMYMEEIVSL 547
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGK 595
W T+ I I K+K VE +A+ +Y + G + F+V RGK
Sbjct: 548 WAETN------IINEINKNKLVFVETPDGRETEMALSNYRRACDN--GRGGMLFSVARGK 599
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGED 655
VSEG+DF D GR VV+ G+PF ++R + ++L EY + FL+ +
Sbjct: 600 VSEGVDFEDGYGRCVVMLGVPFQYTESVRLRKRLDFLR-------EEYGIKEYDFLTFD- 651
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI---QCYSKF 712
A R Q +GRV+R+++DYG +I DERF +K ++ WIQ I C
Sbjct: 652 -----AMRHAAQCLGRVLRNKNDYGLMILADERFERNDKKGKLPKWIQNCIDGGNCNLSV 706
Query: 713 GDVVYTLTRFFRE 725
+ RFFRE
Sbjct: 707 DMALSIARRFFRE 719
>gi|254571493|ref|XP_002492856.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|238032654|emb|CAY70677.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|328353133|emb|CCA39531.1| chromosome transmission fidelity protein 1 [Komagataella pastoris
CBS 7435]
Length = 811
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 182/681 (26%), Positives = 298/681 (43%), Gaps = 68/681 (9%)
Query: 76 QISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY---------RPKMVIL 126
+IS S+ + Q+ + IL++SRTHSQL Q +L+ +++ K + +
Sbjct: 167 KISQKDSNSDPFQNLERSQTRILFSSRTHSQLNQFTSQLRLTSFPSSLGAVEEHIKYLPI 226
Query: 127 GSREQLCIHREVSLLRG----------SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP 176
GSR+QLCI+ +V+ + + +++ C++ + + DY +
Sbjct: 227 GSRKQLCINPKVNHYQSLPLLNEACLEAQKDSNCKYYDQPNNPQTMQRMQEFRDYTYSEI 286
Query: 177 HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
H DIEDL IG + CPY+ R+ +I+ PY L++ R+ L ++ +NS
Sbjct: 287 H------DIEDLNGIGESLDICPYYSIRKSIPLSEIISLPYQMLLERNTRQILNIDLRNS 340
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
I+I DEAHNL S LS L K + STR +S +N
Sbjct: 341 IVIVDEAHNLMDTIMALNSTSLSYKELIDMRKSLKYYLQKFSTR--MNSGNRINCLKLVK 398
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPGPY-----IYELLADLNITQETAYKLIDIVEVA 351
L LLL KR E I KPG I+ D+NI Q Y +
Sbjct: 399 LTELLLTYIKRKKETRI--------KPGEKLDLMDIFPTNVDINIFQLETYLTTSKLAFK 450
Query: 352 AELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGK 411
E E C ++ ++F+ K S H + +V
Sbjct: 451 VETYME----------KCSGRHANHASPLLFKLKKFLSSL---SHPSDNGCFFFEVAGDD 497
Query: 412 ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR----VENPH 467
S L + +P Q+ E +IL GT+ PM+ + L + P H
Sbjct: 498 IS--LKFLLLDPSEIFQDIVD-ESRCVILAGGTMEPMEDYVNFLFKHTPRNKIKMFSCDH 554
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
+I + + G G LLN S+ NR+S ++LG +I+ I + VP G +IFFPSY
Sbjct: 555 IIPKNNLKVFALSNGMEGNLLNFSFSNRESPAIIKDLGTSILKIVQCVPGGTVIFFPSYK 614
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAV 587
+++ + WK TS +W + + K EP S + DY K+ + GA+
Sbjct: 615 YLEKVVEHWKLTS----PLMWSTLNRLKDIFTEPTDSGKVEDVLSDYSRKISENPKRGAI 670
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
F+V GK+SEG++F D R +++ G+PF ++ +R++++ S E K
Sbjct: 671 LFSVVGGKMSEGINFQDDLARGIIMVGLPFPNAFSGELIARRKFIE---DSVLKETNSRK 727
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
S + +D+Y R+VNQ+VGR IRH +DY I D R+ + + + ++S WI+
Sbjct: 728 ASLQASKDFYENICMRSVNQSVGRAIRHINDYAVIFLLDNRYNNTNIQQKLSGWIRKRFA 787
Query: 708 CYSKFGDVVYTLTRFFREERI 728
++ + FFR ++
Sbjct: 788 SFT-MSKAISETEDFFRNRKL 807
Score = 47.0 bits (110), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAWRKSLGSFS-TLGS 71
PF+ YD Q M + ++ L ESPTGTGKTL ++C+ ++W + + + GS
Sbjct: 7 PFKPYDIQTQLMTAIYDTIAGGYKVGLFESPTGTGKTLSIICSVMSWLREYKTKNPDQGS 66
Query: 72 QVN-NQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMV 124
Q N ++S + S + + LP I R + +++ E S R K+V
Sbjct: 67 QQNETEVSDDEPSWVTEAYESTVLPKIKEKQREY----EIVLEKVKSQKRGKVV 116
>gi|388583056|gb|EIM23359.1| DNA repair helicase [Wallemia sebi CBS 633.66]
Length = 831
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 174/662 (26%), Positives = 300/662 (45%), Gaps = 68/662 (10%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYR--PKMVILGSREQLCIHREVSLLRG--SAQNNACRF 152
I + SRTHSQL Q I E+ + Y+ +++ L SR+ LCI+ + G + N CR
Sbjct: 205 IFFASRTHSQLSQFISEINKTTYKQDARVISLASRKNLCINEKARNAPGGDAGLNERCRE 264
Query: 153 L--CKKGTNRRCNHHSRVADYMK---NNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQ 207
L + +RC + ++ + K H ++EDL +G+ CPY+ +R
Sbjct: 265 LRTAPASSEKRCKFYPKIEEQTKLLEFRDHALASIRNVEDLEELGKNLNVCPYYGSRRAI 324
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
K +I PYN L+ R+ +G+ K+ I++ DEAHNL S +S L A +
Sbjct: 325 KQSEICTLPYNLLLSKRARESMGISLKDHIVVIDEAHNLIDTILAVHSCSVSLKTLNAAM 384
Query: 268 SEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYI 327
I R + ++ +A L+ +++ V + P +
Sbjct: 385 KALSTYIQRYGKR--LKGNHVVSLKLYAKTLKGLINFCQKVRSVNKKPTQEIIYLPKDVV 442
Query: 328 YELLADLNITQETAY--------KLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILK 379
+ D+N+ AY KL E A ++D L+N + T+ ES+S
Sbjct: 443 GDFGEDVNLGNVEAYLRDSHMSQKLGSFAEREA---KKDGLKNGQLTSP---ESLS---- 492
Query: 380 IIFRDKGTAH---SAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL--E 434
+ + H S + +AD + R LS+ N + F + +
Sbjct: 493 --YASANSMHQVQSLLLALAYPDADGRVVVTFDAEIPR-LSYQLLN---GAEHFKSIVDD 546
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENP----HVITSKQIWAGIVPVGPSGYLLNS 490
SIIL GT+ P+ F L + P N HVI + A + GPSG ++
Sbjct: 547 ARSIILAGGTMHPVSDFKTFLMPSLPASRFNSLSCEHVIPPTNLLATAITKGPSGQEMDF 606
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
+ NR ++ ELG I N+ ++PDGL+IFFPSY ++ + WK + + +R
Sbjct: 607 RFENRSKVDLLNELGMIIQNLVNLIPDGLVIFFPSYGYLNTVESHWKASG------LLKR 660
Query: 551 ICKHKKPVVEPRQSSLFPLAIEDYMAKL--KDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
I + KK EP++S+ ++ Y + K +G++ FAV K+SEG++F+D+ R
Sbjct: 661 IEQKKKVFREPKESTDVQATLDKYAEAILNKSDKMTGSILFAVVGAKLSEGINFSDNLAR 720
Query: 609 AVVITGMPFATMTDPKVRLKREYL---DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
+ + G+PF + + P + ++ Y+ + QA +G + Q RAV
Sbjct: 721 GIAMVGLPFPSPS-PALEERKNYVRSFNKQANQD------------TGNELVMNQCMRAV 767
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
NQ++GR IRH++D+ +I D+RFA ++++ WI+ + + F + T+ F+
Sbjct: 768 NQSIGRAIRHQNDWAGLILIDKRFATSQIQNKLPGWIKKSVSVSNSFPQAIKTIAPFYSH 827
Query: 726 ER 727
+R
Sbjct: 828 KR 829
>gi|389637597|ref|XP_003716432.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
gi|351642251|gb|EHA50113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
Length = 921
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 200/731 (27%), Positives = 326/731 (44%), Gaps = 119/731 (16%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--------RP-------------KMVILGSREQLCIH 135
I YTSRTHSQL Q I EL+ N+ P K V L SR++LCI+
Sbjct: 204 IFYTSRTHSQLTQFISELRRPNFPSSFPGADEPSLSKTETGTRECVKHVPLSSRQKLCIN 263
Query: 136 REVSLLRG-SAQNNACRFLCK---KGTNRRCNHHSRVADYMKNNPHLGDEPI----DIED 187
V+ L +A N+ C L K K +RC + D + D + DIED
Sbjct: 264 PAVARLGSVAAINDRCTELQKSKAKSEGKRCPYVPS-QDNLSETHQFRDASLATIPDIED 322
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
+G++ CPY+ TR +IV PY L+ R LG+E + S+++ DEAHN+
Sbjct: 323 AHKLGKSLQVCPYYATRTAIPGAEIVTLPYPLLLQKSARDALGIELQGSVVVVDEAHNI- 381
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ---SSDETLNPDNFAILRALLLKL 304
DA + S+ + + + + I + R G+ + + + +++ L L
Sbjct: 382 ---MDAIAGVHSAEIRLEDLRRGREMLSIYAKRFGKKLKAENRIMVGQVARVIQGLSEWL 438
Query: 305 EKRIAEVPINSKELGFTKP-------GPYIYELLADLNITQET--AYKLIDIVEVAAELL 355
E+ + + S E G P G ++ A ++ QE+ AYK+ EL
Sbjct: 439 ERALEQ----SVEHGIIDPRVLLKTKGMDQIDMFALISYIQESKLAYKIESYAAHVDELE 494
Query: 356 QEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
+ K Q K T+ + ++S+ L + + T ++ V + + D+
Sbjct: 495 EASKGQKKTIRTSPVLHNLSSFL-LALTNLSTEGRIFFEKVVVDGGSKQYDI-------K 546
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP----LRVENPHVITS 471
LS+ +P A + ++IL GT+SP + L + P ++ HVI S
Sbjct: 547 LSYMLLSPTYAFSSIA-TSARAVILAGGTMSPFQDYETHLFPSHPQHKITKLSCGHVIPS 605
Query: 472 KQ--IW--AGIVPVGPSGY--LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
+W A + P P+G L S++ R Q+LG I+NI VPDG+++FFPS
Sbjct: 606 SNLCVWTLASMRPATPAGNSDLFEFSFQKRRDKTMIQQLGTAILNICSAVPDGVVVFFPS 665
Query: 526 YYLMDQCIACWKN----TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM------ 575
Y +D+ +A + T ++IW+++ + +K V + +EDY
Sbjct: 666 YGYLDEVVAALQQKLAATGTAPNSSIWDKL-QSRKAVFRETKGGSSDQVLEDYSNAILGE 724
Query: 576 ----AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY 631
K + S +GA+ +V GK+SEG++F+D GR VVI G+P+ + P+ + + EY
Sbjct: 725 KDAEGKQRSPSQNGALLLSVVGGKMSEGINFSDRLGRCVVIVGLPYPNVASPEWKARMEY 784
Query: 632 ---------LDLQAQSQGGEY--KETKLS-------------------FLSGEDWYNQQA 661
LD Q + G+ +E+ S + D+Y
Sbjct: 785 IDSSTVAGLLDKQNGTTAGDVSARESTPSATVTKPPSTITREQAAAAGKQAARDFYENAC 844
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ---PHIQCYSKFG--DVV 716
RAVNQ++GR IRHR DY AI+ D RF ++++ WI+ I K G ++
Sbjct: 845 MRAVNQSIGRAIRHRGDYAAIVLLDRRFGTERIRAKLPGWIRCAMAPIGSNEKTGLPGLM 904
Query: 717 YTLTRFFREER 727
TL +FFRE++
Sbjct: 905 GTLNKFFREKK 915
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCN--ALLESPTGTGKTLCLLCATLAW 59
I +D PF YD QL +M+ V LQ +LESPTGTGK+L L+CA L W
Sbjct: 5 IEAVDFNHPFTPYDVQLDFMKTVYGVLQRGEGQVGILESPTGTGKSLSLICACLTW 60
>gi|440487319|gb|ELQ67113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae P131]
Length = 1493
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 200/731 (27%), Positives = 326/731 (44%), Gaps = 119/731 (16%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--------RP-------------KMVILGSREQLCIH 135
I YTSRTHSQL Q I EL+ N+ P K V L SR++LCI+
Sbjct: 776 IFYTSRTHSQLTQFISELRRPNFPSSFPGADEPSLSKTETGTRECVKHVPLSSRQKLCIN 835
Query: 136 REVSLLRG-SAQNNACRFLCK---KGTNRRCNHHSRVADYMKNNPHLGDEPI----DIED 187
V+ L +A N+ C L K K +RC + D + D + DIED
Sbjct: 836 PAVARLGSVAAINDRCTELQKSKAKSEGKRCPYVPS-QDNLSETHQFRDASLATIPDIED 894
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
+G++ CPY+ TR +IV PY L+ R LG+E + S+++ DEAHN+
Sbjct: 895 AHKLGKSLQVCPYYATRTAIPGAEIVTLPYPLLLQKSARDALGIELQGSVVVVDEAHNI- 953
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ---SSDETLNPDNFAILRALLLKL 304
DA + S+ + + + + I + R G+ + + + +++ L L
Sbjct: 954 ---MDAIAGVHSAEIRLEDLRRGREMLSIYAKRFGKKLKAENRIMVGQVARVIQGLSEWL 1010
Query: 305 EKRIAEVPINSKELGFTKP-------GPYIYELLADLNITQET--AYKLIDIVEVAAELL 355
E+ + + S E G P G ++ A ++ QE+ AYK+ EL
Sbjct: 1011 ERALEQ----SVEHGIIDPRVLLKTKGMDQIDMFALISYIQESKLAYKIESYAAHVDELE 1066
Query: 356 QEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
+ K Q K T+ + ++S+ L + + T ++ V + + D+
Sbjct: 1067 EASKGQKKTIRTSPVLHNLSSFL-LALTNLSTEGRIFFEKVVVDGGSKQYDI-------K 1118
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP----LRVENPHVITS 471
LS+ +P A + ++IL GT+SP + L + P ++ HVI S
Sbjct: 1119 LSYMLLSPTYAFSSIA-TSARAVILAGGTMSPFQDYETHLFPSHPQHKITKLSCGHVIPS 1177
Query: 472 KQ--IW--AGIVPVGPSGY--LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
+W A + P P+G L S++ R Q+LG I+NI VPDG+++FFPS
Sbjct: 1178 SNLCVWTLASMRPATPAGNSDLFEFSFQKRRDKTMIQQLGTAILNICSAVPDGVVVFFPS 1237
Query: 526 YYLMDQCIACWKN----TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM------ 575
Y +D+ +A + T ++IW+++ + +K V + +EDY
Sbjct: 1238 YGYLDEVVAALQQKLAATGTAPNSSIWDKL-QSRKAVFRETKGGSSDQVLEDYSNAILGE 1296
Query: 576 ----AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY 631
K + S +GA+ +V GK+SEG++F+D GR VVI G+P+ + P+ + + EY
Sbjct: 1297 KDAEGKQRSPSQNGALLLSVVGGKMSEGINFSDRLGRCVVIVGLPYPNVASPEWKARMEY 1356
Query: 632 ---------LDLQAQSQGGEY--KETKLS-------------------FLSGEDWYNQQA 661
LD Q + G+ +E+ S + D+Y
Sbjct: 1357 IDSSTVAGLLDKQNGTTAGDVSARESTPSATVTKPPSTITREQAAAAGKQAARDFYENAC 1416
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ---PHIQCYSKFG--DVV 716
RAVNQ++GR IRHR DY AI+ D RF ++++ WI+ I K G ++
Sbjct: 1417 MRAVNQSIGRAIRHRGDYAAIVLLDRRFGTERIRAKLPGWIRCAMAPIGSNEKTGLPGLM 1476
Query: 717 YTLTRFFREER 727
TL +FFRE++
Sbjct: 1477 GTLNKFFREKK 1487
>gi|426195896|gb|EKV45825.1| histidine phosphotransfer protein [Agaricus bisporus var. bisporus
H97]
Length = 863
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 185/691 (26%), Positives = 305/691 (44%), Gaps = 91/691 (13%)
Query: 97 ILYTSRTHSQLRQVIQELK-----------------------------TSNYRPKMVILG 127
I Y SRTHSQL QV+ EL+ + ++V LG
Sbjct: 204 IYYASRTHSQLSQVLPELRKIKLSQAVSVIDLHPSSVPQKRGADVLHDVDSTTTRVVALG 263
Query: 128 SREQLCIHREVSLLRGSAQN--NACRFLCKKGTNRRC------NHHSRVADYMKNNPHLG 179
SR+QLCI+ E LR A++ ACR L + ++RC ++ D+ +
Sbjct: 264 SRKQLCINDE---LRSKARDLDEACRELLSEKGDQRCPYLPPPGEDIKIIDF---RDQIL 317
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
P DIEDL +GR CPYF +R ++V PYN L+ R+ LG++ ++ I++
Sbjct: 318 AAPKDIEDLAEVGRMADTCPYFGSRHAIPQAELVTLPYNLLLQKSAREALGIDLRDQIVV 377
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
DEAHNL ++ L +L + + C +S R S+ ++ +
Sbjct: 378 IDEAHNLIPTLLSLSTTHLPYHILDVSLRQV--CAYLSKFRMRLSARNLVHLKRLVVFLD 435
Query: 300 LLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKL--IDIVEVAAELLQE 357
L K + E N +L T E+L + + K I+++E+ + L+E
Sbjct: 436 ALKKTLIQWKEKQCN--DLSSTSRSAERLEVLTLAELLDQMGRKAAGINLLEIG-QYLKE 492
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRV---HVREA----------DANA 404
K+ K S A + DK + A ++ HV E D
Sbjct: 493 SKIARKISGYADKET-----------DKESGSGAKGQIPPLHVVEDFMVSLTNTNDDGRV 541
Query: 405 ADVLKGKASRT---LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
L GK + + + NP + E S+IL GT+SPM +L +
Sbjct: 542 TLALFGKQGQEQVEIKYQLLNPAPNFMDVVD-EARSVILAGGTMSPMSDVVSQLFSHALE 600
Query: 462 RVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
R+ HVI K + A +V P G L + ELG ++N A ++P G
Sbjct: 601 RIRTFSCGHVIPEKNLQALVVTKSPRGGSLEYKADKQGDPNVVAELGQILLNFANVIPAG 660
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
+++FFPSY + + WK + G L +R ++ EP S+ + +Y A
Sbjct: 661 VVVFFPSYSFLKFAKSVWK--AGGTL----DRFSAKREVFFEPDGSTDVERVLGEYAAAA 714
Query: 579 KD--TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
+ GA+ FAV K+SEGL+F+D RAV++ G+PFA + P+++ + +Y+
Sbjct: 715 TTPPVNKKGAILFAVIGAKLSEGLNFSDDLARAVIVIGLPFANLGSPELKERLKYVKQLE 774
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
+ +G +K K + + Y +VNQ++GR IRH+ D+ ++I D+R+A + +
Sbjct: 775 ERRG--FKREKGQKDAAAELYENMCMNSVNQSIGRAIRHKGDWASLILLDQRYASSAIRM 832
Query: 697 QISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
++ WI + FG V+ L +F+ E+R
Sbjct: 833 KLPQWIGGRLFIPDGFGQVMRQLGQFYNEKR 863
>gi|392591953|gb|EIW81280.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 867
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 190/709 (26%), Positives = 311/709 (43%), Gaps = 120/709 (16%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP----------------------------------- 121
I Y SRTHSQL Q++ EL+ ++
Sbjct: 198 IYYASRTHSQLTQILPELRKLKFKLTSIPDTEPSHHGNQKEVSLKRRQEQAESDDDEGPS 257
Query: 122 ---KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNH------HSRVADYM 172
+ LGSR+QLCI+ EV G + CR L ++ +RC + R+AD
Sbjct: 258 TPWRTASLGSRKQLCINDEVKAKHGDL-DEKCRELLEEKGKKRCQYLPPLEEEHRLADL- 315
Query: 173 KNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVE 232
+ P DI +L GR CPY+ +R+ ++V PYN L+ R+ LG++
Sbjct: 316 --RDQILASPKDIVELAAAGRNSHICPYYGSRKAVPQAELVTLPYNLLLLKSAREALGID 373
Query: 233 WKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPD 292
++I DEAHNL +S LS G L+A +S+ R
Sbjct: 374 LTGQVVIIDEAHNLIPTLLSISSSSLSFGTLSAALSQVTVYYKRFRNR------------ 421
Query: 293 NFAILRALLLK-LEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA 351
F+ AL LK L + ++ + KE +KP + DL + I+++E+
Sbjct: 422 -FSPTHALHLKRLVEFMSSLQRFLKEKAASKPSTQEAMTVPDLGCALGHKVEGINLLEI- 479
Query: 352 AELLQEDKLQNKKSTTACRIESI-----SNILKIIFRDKG--------------TAHSAY 392
E L+ K+ +K + C E+I + + R KG +A S
Sbjct: 480 VEYLKTSKVA-RKVSGYCEKEAIRKSEQESQHRTYTRGKGNPPLHAIESFITGISAASED 538
Query: 393 YRVHV---READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMD 449
R+ + RE+DA+ +++ + NP ++ + S++L GT+SP+
Sbjct: 539 GRLILSLGRESDASDSEI---------KYQLLNPATIFRDVVDV-ARSVVLAGGTMSPIS 588
Query: 450 SFAQELKLNFPLRVENP-------HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
+L FP + H++ + A +V GPSG L+ S+ N+ +
Sbjct: 589 DVTNQL---FPYLSDASLSTFSCGHIVPQSHVQALLVGKGPSGRTLDFSFGNQKDKQLVN 645
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
ELG TI N +VP G+++FFPSY + W + IW+++ + K+ +EPR
Sbjct: 646 ELGRTIANFVNLVPGGMVVFFPSYTYLYFAKEMWGTSG------IWDQLARKKQLFIEPR 699
Query: 563 QSSLFPLAIEDYMAKL---KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
+++ + Y A D T GA+ FAV GKVSEGL+F+D RAV++ G+PFA
Sbjct: 700 EATGVESLLRAYSAAAITQPDDGTKGALLFAVVGGKVSEGLNFSDDMARAVMVVGLPFAN 759
Query: 620 MTDPKVRLKREYL-DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
+++ + Y+ +L+++ + + Y AVNQ++GR IRH+ D
Sbjct: 760 KASIELQERLRYVKELESKISNKHLGAKN----TASELYVNMCMSAVNQSIGRAIRHKMD 815
Query: 679 YGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+ A+I D RF S + ++ WI I FG V L+ F+R ++
Sbjct: 816 WAALILVDHRFGTASIQGKLPQWIGAGIVPCDTFGSAVKQLSVFYRNKK 864
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 13 FPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW--------RKSL 63
FP++ Y Q M V S++ + ++ESPTGTGKTL LLC++L W RK L
Sbjct: 14 FPYDPPYSIQTDLMRHVYASIEGRKVTIVESPTGTGKTLSLLCSSLTWLNDEKNRARKGL 73
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQ 88
ST S + + +S V Q
Sbjct: 74 LEASTSTSTMPSWVSAHSIQVMQQQ 98
>gi|321249881|ref|XP_003191608.1| general RNA polymerase II transcription factor [Cryptococcus gattii
WM276]
gi|317458075|gb|ADV19821.1| general RNA polymerase II transcription factor, putative
[Cryptococcus gattii WM276]
Length = 799
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 197/774 (25%), Positives = 353/774 (45%), Gaps = 110/774 (14%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ + + V FP++ Y Q YM + +L + +LE P+GTGKT+ LL +A+
Sbjct: 3 FMLGDLPVLFPYDRLYPEQYSYMADLKTTLDAGGHCVLEMPSGTGKTVSLLSLIIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
Q N + ++Y SRT ++ + + ELK YR
Sbjct: 60 -----------------MQFYPNKRK--------LIYCSRTVPEIEKALAELKRLMAYRA 94
Query: 122 KM---------VILGSREQLCIHREVSL-LRGSAQNNACR-----FLCKKG-----TNRR 161
M + L SR LC+H EVS +G ++ CR + C+KG +
Sbjct: 95 DMGANDGNFRGLGLTSRRNLCLHPEVSKEKKGKVVDSRCRDLTSAYACEKGRADPGSVPL 154
Query: 162 CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
C+ H + +Y N + ++D+ G+ G CPYF R + +D+V ++YL+
Sbjct: 155 CSFHEELNNYEPGN-LIPPGVYTLDDVKKYGQEKGVCPYFTIRRMLPFLDVVIYSFHYLL 213
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID----I 276
DP + + E K SI++FDEAHN++ +C ++ S DL+ +L + D I
Sbjct: 214 DPKVAEQVSAEMSKESIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVNKLNDKIAEI 273
Query: 277 SSTRRGQSSDE-----------TLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFT 321
T + DE ++ ++ +L + +L + VP N ++ + F
Sbjct: 274 KETDAKKLEDEYAKLVEGLQEANVSAEDEDMLVSPVLSKDMVDEAVPGNIRKAEHFIAFL 333
Query: 322 KPG-PYIYELLADLNITQETAYKLIDIVEVAAELLQED-KLQNKKSTTACRIESISNILK 379
K Y+ + L++ ET + ++ + Q K +++ T+ R ++N+ +
Sbjct: 334 KRFIEYLKTRMRVLHVVAETPQSFLAHLKEITYIEQRPLKFASERLTSLVRTLELTNLEE 393
Query: 380 IIFRDK----GTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FS 431
K GT + Y + + + + A V + + C +P +A+ F
Sbjct: 394 HSALQKVAGFGTLVATYEKGFLLILEPYETEHATV----PNPIFHFTCLDPSLAIAPVFD 449
Query: 432 RLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
R S+++TSGT+SP+D + + L+ + P +T ++ G ++S
Sbjct: 450 RF--ASVVITSGTISPLDMYPKMLQFQPVMEQSYPMTLTRNAFLPMVITRGSDQVPISSR 507
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
+ R+ + G+ ++ +AR VPDG++ FFPSY M+ ++ W + G L+ +W
Sbjct: 508 FEVRNDPAVVRNFGSILIEMARTVPDGVVAFFPSYLYMESIVSAWYDM--GILSEVW--- 562
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
KHK VE + +A+ +Y + GAV +V RGKVSEG+DF + GRAV+
Sbjct: 563 -KHKLLFVETPDAMETSIALRNYREACNN--GRGAVLLSVARGKVSEGIDFDHNYGRAVI 619
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
+ G+P+ ++ + E+L + + +Y L+F A R Q VGR
Sbjct: 620 MFGIPYQYTESRILKARLEFLRDNHRIRENDY----LTF---------DAMRHAAQCVGR 666
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYTLTRFF 723
V+R + D+G +IF D+RFA +++++ WI +I + +S DV +L + F
Sbjct: 667 VLRGKTDWGLMIFADKRFARQDKRAKLPKWINSYITEAHSNLSTDVAVSLAKKF 720
>gi|392560811|gb|EIW53993.1| DNA repair helicase [Trametes versicolor FP-101664 SS1]
Length = 875
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 201/721 (27%), Positives = 314/721 (43%), Gaps = 107/721 (14%)
Query: 91 DSKLPT---ILYTSRTHSQLRQVIQELKTSNYR--------------------------- 120
D K PT I Y SRTHSQL Q + EL+ +
Sbjct: 174 DDKEPTCTKIYYASRTHSQLAQALHELEKLKLKLNVAVSSIQQVHQKLATAKRSASAVEE 233
Query: 121 ------------PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV 168
+ V LGSR+QLCIH + + S + ACR + + +RC H V
Sbjct: 234 HDASTEDEEGSGARAVSLGSRKQLCIHERLRE-KASDLDEACRQMLGEKGKKRCPHLPTV 292
Query: 169 ADYMKNNPHLGDE----PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
+ K L D+ P DIEDL G+ CPYF R+ +V PYN L+
Sbjct: 293 EEETKM-LDLRDQILAVPKDIEDLFLTGQAADTCPYFGARKAIPQAQLVLLPYNLLLQRT 351
Query: 225 FRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS 284
R+ LG++ ++I DEAHNL ++ L L T + + I +S R S
Sbjct: 352 AREALGIDLTGQVVIIDEAHNLTSTLLSLSTTRLP--LRTLVNARHQLSIYLSRFRNRLS 409
Query: 285 SDETLNPDNFA-ILRALLLKLEK-RIAEVPINSKELGFTKPGPYIYELLADLNITQETAY 342
+ L+ +L AL+ E+ R A++ ++ K E++ + Q
Sbjct: 410 TTHALHLKRLMNLLDALVQYAEEWRDAQLKVDKGNGAAGKARASEVEVMTSAELLQRLGR 469
Query: 343 KL--IDIVEVAAELLQEDKLQNKKSTTACRI------ESISNILKIIFRDKGTAHSAYYR 394
K ++++EV + L+E K+ K S + + + I+ + K+ S
Sbjct: 470 KAEGVNLLEVE-KYLRESKIARKISGYSVKTLEKAAGQDIAKLAKL-----ARLASTTPP 523
Query: 395 VHVREADANAADVLKGKASRTLS---------WWCFNPGIAMQEFSRLEVGSIILTSGTL 445
+H E+ A TLS + NP QE ++IL GT+
Sbjct: 524 LHAVESFITALSASSDDGRVTLSMVDGQVEIKYQHLNPATYFQEVID-SARAVILAGGTM 582
Query: 446 SPMDSFAQELKLNFPL-RVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
SP+D +L P R+ H+I + + ++ GP G L Y+ R
Sbjct: 583 SPIDDVVHQLFSALPADRLSTFSCGHIIPPENLQTLVLKKGPRGGELQFKYQQRGDEGLI 642
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEP 561
ELG ++N +VP G+++F PSY ++ W+ + E++ KK EP
Sbjct: 643 AELGQILLNFTNVVPGGMVVFVPSYAFLNTVTKQWQAGG------LLEKLNAKKKVFSEP 696
Query: 562 RQSSLFPLAIEDYMAKLKDTSTS------GAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+QS+ + DY A+++ S GA+ FAV K+SEGL+FAD RAVVI G+
Sbjct: 697 QQSNEVEAVLRDYSAQIQSGDDSAGGKKRGALLFAVVGAKLSEGLNFADDLARAVVIIGL 756
Query: 616 PFATMTDPKVRLKREYLDLQAQ---------SQGGEYKETKLSFLSGEDWYNQQASRAVN 666
PFA + P++R + Y++ Q S+ G K+ +G + Y AVN
Sbjct: 757 PFANLGSPELRERMNYVNRLEQRRRAAAAPSSRPGGAKD------AGTELYENMCMNAVN 810
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
Q++GR IRHR D+ A+I D R+A P +S++ WI+ + FG + L RF+RE+
Sbjct: 811 QSIGRAIRHRGDWAALILVDGRYASPRIRSKLPKWIEAGTKVADGFGQAMKELGRFYREK 870
Query: 727 R 727
+
Sbjct: 871 K 871
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF+ YD QL M V ++N A+ ESPTGTGKTL LLCA+L W
Sbjct: 15 FPFKPYDIQLELMSHVYSCIENGKVAITESPTGTGKTLSLLCASLTW 61
>gi|320581727|gb|EFW95946.1| ATP-dependent RNA helicase Chl1, putative [Ogataea parapolymorpha
DL-1]
Length = 802
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 200/677 (29%), Positives = 312/677 (46%), Gaps = 106/677 (15%)
Query: 91 DSKLPTILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLL 141
DSK I ++SRTHSQL Q Q+L+ +++ + K + LGSR+QLCI+ +VS L
Sbjct: 185 DSK---IFFSSRTHSQLSQFGQQLRLTHFPSSLESVEEKTKYLALGSRKQLCINEKVSSL 241
Query: 142 RGSAQ-NNACRFLC-KKGTNRRCNHHSR--VADYMKNNPHLGDEPI-DIEDLVNIGRTFG 196
+ Q N AC L KK + C++ R D L I DIE+L IG +
Sbjct: 242 KDVQQINEACLELQRKKDGEKGCSYMPRPETEDLTTQFRDLTFSEIRDIEELHEIGSHYR 301
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
CPY+ R + +IV PY L+ R+ LG++ KNSI++ DEAHNL
Sbjct: 302 VCPYYSLRRGMEIAEIVSMPYQLLLQKSTRQVLGLDLKNSIVVIDEAHNL---------L 352
Query: 257 DLSSGLLTACISEAKNCIDISSTRRGQSSDET-----LNPDN----------FAILRALL 301
D S L +A IS ++ R+ S T LN N IL L
Sbjct: 353 DTISSLNSATIS----LNELLKVRKALKSYTTKFASRLNAGNRINLAKLSKMITILAKFL 408
Query: 302 LK-LEKRIAEVPINSKELGFTKPGPYI-YELLADLNITQETAYKLIDIVEVAAELLQEDK 359
+K EK+ A IN + G + + L + AYKL +E E
Sbjct: 409 MKDGEKKAAGTEINVTSIFDDTTGDLLNFHSLETYLTKSKIAYKLESYMEKIDE------ 462
Query: 360 LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWW 419
N K+ T + I + L+ + + Y D ++AD + + +
Sbjct: 463 --NYKAGTPILFK-IRSFLECLSNPSKSGKLFY--------DRDSADGI------AMKYL 505
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI----W 475
+P A ++ E +IL GT+ P+ F +NF + P+V SKQI
Sbjct: 506 LLDPSEAFRDVVE-ECKCVILAGGTMEPISDF-----INFLV----PYV-ESKQIKHFSC 554
Query: 476 AGIVP-----VGP----SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
I+P V P G S+ R+ + LG TI+ + +VPDG+++FFPSY
Sbjct: 555 DHIIPASNLDVYPVKSRQGVEFEFSFDKRNDKKMIDALGETILEMVAVVPDGMVVFFPSY 614
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGA 586
+DQ + WK + H + RI + K E R++++ + +++Y + GA
Sbjct: 615 KYLDQLVELWKKSGH------YHRINQVKTIYTESRENAVDNV-LQNYSQCI--LERRGA 665
Query: 587 VFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET 646
V FAV GK+SEG++F+D RAV + G+PF + + KR+Y++ + GG ++
Sbjct: 666 VLFAVVGGKMSEGINFSDELARAVAMVGLPFPNLMSGDLIAKRKYVESKTIEMGGSRED- 724
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ + ++Y +AVNQ+VGR IR+ DY I D R+ P + ++S WI+ I
Sbjct: 725 --ALANAREFYENICMKAVNQSVGRAIRNIRDYSVIYLIDVRYERPHIQKKLSGWIKKRI 782
Query: 707 QCYSKFGDVVYTLTRFF 723
+ + +V+ RFF
Sbjct: 783 ERGGELSEVIKQTKRFF 799
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 14 PFEAYDCQLVYMEKVIQSLQ-NKCNALLESPTGTGKTLCLLCATLAWRKSL 63
P+ YD Q+ ME + +L N + ESPTGTGKTL ++C+T+ W + L
Sbjct: 14 PYTPYDVQVKLMEAIYDTLTGNYKVGIFESPTGTGKTLSIICSTMTWLREL 64
>gi|121704642|ref|XP_001270584.1| DEAD_2 domain protein [Aspergillus clavatus NRRL 1]
gi|206558082|sp|A1CJ34.1|CHL1_ASPCL RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|119398730|gb|EAW09158.1| DEAD_2 domain protein [Aspergillus clavatus NRRL 1]
Length = 731
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 197/718 (27%), Positives = 317/718 (44%), Gaps = 85/718 (11%)
Query: 61 KSLG-----SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK 115
KSLG S STL + S + GD + P I Y SRTHSQL Q EL+
Sbjct: 37 KSLGHSSELSMSTLALLERFKKQYSAPTEEEETVGDDE-PKIFYCSRTHSQLAQFASELR 95
Query: 116 TSNYRP--------------------KMVILGSREQLCIH-REVSLLRGSAQNNACRFLC 154
P K + LGSR+ LCI+ R + L +A N C L
Sbjct: 96 RVEMPPSLPKELSEKLTDSEALEERVKHLSLGSRKNLCINPRVMKLENATAINERCMDLQ 155
Query: 155 KKG--TNRRCNHHSRVAD---YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKT 209
+ G RC + D ++ H DIED+ +G+ G CPY+ +R + K
Sbjct: 156 QPGMAVEHRCPYLPSKDDEPQVLQFRDHTLATVKDIEDMGKLGKHIGVCPYYASRSVIKH 215
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS-SGLLTACIS 268
+IV PY L+ R+ LG+ KN I+I DEAHNL ++ S ++ S L TA
Sbjct: 216 SEIVTLPYPLLLQRSAREALGLSIKNHIVIIDEAHNLMDAISNIHSVTITLSQLQTAIFQ 275
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGP--- 325
+ +G++ R + ++ + ++ V + + + + P
Sbjct: 276 LTTYARKFKTRLKGKN-------------RTYIAQVIRLVSSVADHLRSIQGSNQPPDGA 322
Query: 326 -YIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK-------KSTTACRIESISNI 377
+L+A + Q YKL + LQE KL K TA R
Sbjct: 323 VKTSDLMAGKGVDQINPYKL-------SHYLQESKLARKVDGYVEYSKDTANRQSHGKPS 375
Query: 378 LKIIFRDKGTAHSAYYRVHVREADANAADV-LKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
++F H + + + A +K + L + +P +E +
Sbjct: 376 TPVLF------HVQSFLLPLMNPSAEGRLFYMKDQNDIQLKYLLLDPTNHFREIVE-DAR 428
Query: 437 SIILTSGTLSPMDSFAQELKLNFPL-RVEN---PHVITSKQIWAGIVPVGPSGYLLNSSY 492
++IL GT+SPM + L P R++ HVI + + A + G G + +Y
Sbjct: 429 AVILAGGTMSPMSDYMNHLFPYVPASRLDTFSYGHVIPPENLVAHTLAQGVMGCAFDFTY 488
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
+RDS + +LG T+ + + +PDG++ FFPSY + + + WK + +
Sbjct: 489 ESRDSEKMIIDLGRTVATLCQAIPDGVVAFFPSYDYLSRILHIWKKPLGADKNQTILGLI 548
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVFFAVCRGKVSEGLDFADHAGRAV 610
+ KKP++ +S +D + + T S SGA+ +V GK+SEG++F+D GR V
Sbjct: 549 ERKKPIL--YESRDMTTKSDDILQEYTRTIDSGSGALLLSVIGGKLSEGINFSDRLGRGV 606
Query: 611 VITGMPFATMTDPKVRLKREYLDLQAQS--QGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
+I G+PF + + K +Y++ +A S G E ++ +G D+Y RAVNQ
Sbjct: 607 LIIGLPFPNIRSAVWQAKLQYVEQKAYSGSSGSETDRQMIAKAAGRDFYENACMRAVNQC 666
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI-QPHIQCYSK--FGDVVYTLTRFF 723
+GR IRHR+DY AI+ D R+ P+ + ++ WI Q ++ ++ G V L +FF
Sbjct: 667 IGRAIRHRNDYAAIVMIDRRYDKPNIQGKLPAWIKQSMVRSPTQRPAGATVQNLIKFF 724
>gi|58258935|ref|XP_566880.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. neoformans JEC21]
gi|134107057|ref|XP_777841.1| hypothetical protein CNBA5380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260539|gb|EAL23194.1| hypothetical protein CNBA5380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223017|gb|AAW41061.1| general RNA polymerase II transcription factor, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 799
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 197/776 (25%), Positives = 351/776 (45%), Gaps = 114/776 (14%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ + + V FP++ Y Q YM + +L + +LE P+GTGKT+ LL +A+
Sbjct: 3 FMLGDLPVLFPYDRLYPEQYSYMADLKTTLDAGGHCVLEMPSGTGKTVSLLSLIIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
Q N + ++Y SRT ++ + + ELK YR
Sbjct: 60 -----------------MQFYPNKRK--------LIYCSRTVPEIEKALAELKRLMMYRA 94
Query: 122 KM---------VILGSREQLCIHREVSL-LRGSAQNNACR-----FLCKKG-----TNRR 161
+M + L SR LC+H EVS +G ++ CR F C+KG +
Sbjct: 95 EMGANDGDFRGLGLTSRRNLCLHPEVSKEKKGKIVDSRCRDLTSAFACEKGRADPGSVPL 154
Query: 162 CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
C+ H + +Y N + ++D+ G+ G CPYF R + +D++ ++YL+
Sbjct: 155 CSFHEELNNYEPGN-LIPPGVYTLDDVKKYGQEKGVCPYFTIRRMLPFLDVMIYSFHYLL 213
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTR 280
DP + + E K SI+IFDEAHN++ +C ++ S DL+ +L + D
Sbjct: 214 DPKVAEQVSAEMSKESIVIFDEAHNIDNVCIESLSIDLTRPMLDSAARSVNKLSD--KIA 271
Query: 281 RGQSSDETLNPDNFAILRALLLKLEKRIAE-----VPINSKEL-GFTKPG---------- 324
+ +D D +A L L + +R+ + P+ SK++ PG
Sbjct: 272 EIKETDAKKLEDEYAKLVEGLQEANERVEDDDMLVSPVLSKDMVDEAIPGNIRKAEHFIA 331
Query: 325 ------PYIYELLADLNITQETAYKLIDIVEVAAELLQED-KLQNKKSTTACRIESISNI 377
Y+ + L++ ET + ++ + Q K +++ T R ++N+
Sbjct: 332 FLKRFIEYLKTRMRVLHVVAETPQSFLAHLKEITYIDQRPLKFASERLTCLVRTLELTNL 391
Query: 378 LKIIFRDK----GTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE- 429
+ K GT + Y + + + + A V + + C +P +A+
Sbjct: 392 EEHSALQKVAGFGTLVATYEKGFLLILEPYETEHATV----PNPIFHFTCLDPSLAIAPV 447
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
F R S+++TSGT+SP+D + + L+ + P +T ++ G ++
Sbjct: 448 FDRF--ASVVITSGTISPLDMYPKMLQFQPVMEQSYPMTLTRNAFLPMVITRGSDQVPIS 505
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
S + R+ + G+ ++ +AR VPDG++ FFPSY M+ ++ W + G L+ +W
Sbjct: 506 SRFEVRNDPAVVRNFGSILIEMARTVPDGVVAFFPSYLYMESIVSAWYDM--GILSEVW- 562
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
KHK VE + +A+ +Y + GAV +V RGKVSEG+DF + GRA
Sbjct: 563 ---KHKLLFVETPDAMETSIALRNYREACNN--GRGAVLLSVARGKVSEGIDFDHNYGRA 617
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V++ G+P+ ++ + E+L + + +Y L+F A R Q V
Sbjct: 618 VIMFGIPYQYTESRILKARLEFLRDNHRIRENDY----LTF---------DAMRHAAQCV 664
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYTLTRFF 723
GRV+R + D+G ++F D+RFA +++++ WI +I + +S DV +L + F
Sbjct: 665 GRVLRGKTDWGLMVFADKRFARQDKRAKLPKWINSYITEAHSNLSTDVAVSLAKKF 720
>gi|195430790|ref|XP_002063431.1| GK21904 [Drosophila willistoni]
gi|194159516|gb|EDW74417.1| GK21904 [Drosophila willistoni]
Length = 769
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 204/753 (27%), Positives = 347/753 (46%), Gaps = 108/753 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
I ++ + ++Y SRT ++ +VI EL+
Sbjct: 60 -----------MIEHPET-----------IRKLIYCSRTVPEIEKVIAELQNLMVYYERH 97
Query: 117 SNYRPKM--VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADY 171
S+ P M ++L SR+ +CIH EVS R G A + C L R + + + Y
Sbjct: 98 SDNPPAMTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYVRDRHEMDAETPICQY 157
Query: 172 MKNNPHLGDE---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E P+ I+D+ GR+ CPYFM R IV Y+YL+DP
Sbjct: 158 FEGFSLEGKEAALPVGIYSIDDMKEFGRSRNWCPYFMARHAIAHAHIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSS----------GLLTACISEAK--- 271
+ + E + S ++FDEAHN++ +C D+ S ++ LT + E +
Sbjct: 218 AQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNQLTKLVQEIREED 277
Query: 272 -NCIDISSTRRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
N ++ R Q D T+ D IL +L + VP N + L F +
Sbjct: 278 TNRLNEEYQRMVQGLKDATVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFI 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI---- 377
YI L ++ QE++ + ++++++ E K ++ ++ R I+++
Sbjct: 338 EYIKTRLRVHHVVQESSAGFLK--DISSKICIERKPLRFCAERLSSLLRTLEITDLTEFG 395
Query: 378 -LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRL 433
L +I F + ++ + + + D V ++ L + C + IAM FSR
Sbjct: 396 ALTLITHFATLVSTYTKGFTIIIEPFDDKTPTV----SNPILYFSCMDSSIAMAPVFSRF 451
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+ ++++TSGTLSPMD + + L + + + + IV G ++S +
Sbjct: 452 Q--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVAISSKFE 509
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G +V +A+ VPDG++ FF SY ++ +A W + I + + +
Sbjct: 510 TREDTAVIRNYGQLLVEVAKTVPDGVVCFFTSYLYLESVVASWYDQG------IVDTLLR 563
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +E + ++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++
Sbjct: 564 YKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMF 621
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + +YL Q Q + ++ L+F A R Q VGR +
Sbjct: 622 GIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAL 668
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 669 RGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHL 701
>gi|145495232|ref|XP_001433609.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400728|emb|CAK66212.1| unnamed protein product [Paramecium tetraurelia]
Length = 702
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 203/753 (26%), Positives = 350/753 (46%), Gaps = 102/753 (13%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I I+V FP++ Y QL YM+ + Q+L K + +LE PTGTGKT+ LL LA+
Sbjct: 3 FIIDDIEVIFPYKFLYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLAFILAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS----- 117
L + N + ++Y +RT ++ + ++E++
Sbjct: 60 ------LAQRPNT------------------IKKLIYCTRTVVEMEKTLEEVRLVMKARK 95
Query: 118 ----NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRF----LCKKGTNRRC----NHH 165
N V L SR LCI+ +V + ++ CR K+G + C N
Sbjct: 96 AEGLNDNFTAVGLSSRRNLCINPDVVNQKDRV-DSECRKRTAEWVKRGQSEICIFYDNFE 154
Query: 166 SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
D++ N P+ + + DL G CPY+ RE+ K +IV Y YLIDP
Sbjct: 155 KSAKDFIANLPN---DVYSLSDLRKNGGFSMQCPYYTAREMVKKANIVVYNYLYLIDPGI 211
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS 284
L ++ K S+++FDEAHN++ +C +A + L+ +L +EA N + + T+
Sbjct: 212 SSLLSKDYIKESVVVFDEAHNIDDVCIEAYTVRLNKPIL----AEAINNLKVVETQIQSE 267
Query: 285 SDETLNPDNFAILRALLLKLEKRIAEVPINSKEL-GFTKPGPYIYELLADLNITQETAYK 343
++E N N + L+ LEK+ E +N + G + + + I Q+
Sbjct: 268 TNEIQNRLNEE-YKKLIKNLEKK-PEGELNQLVIPGQIRKARNFIDFMK--RIIQKHQKH 323
Query: 344 LIDIVEVAAELLQEDKLQNK---KSTTAC--RIESISNILKIIFRDKGTAHSAYYRVHVR 398
L+ + LL+ K + S C R+ + N L+I DK S + +R
Sbjct: 324 LMLFYIIPKALLKRYKRKGNLDIDSLKQCGERLNLLLNTLQIAETDKFRPLSTVAQFVIR 383
Query: 399 EADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKL 457
+ + + ++ CF+ +AM+ F+ + S+ILTSGT+SP+D + + L
Sbjct: 384 --------IQRTLNEKLMTLACFDSSLAMKNIFASFQ--SVILTSGTMSPIDIYPKILDF 433
Query: 458 NFPLRVENPHV-ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
P+ ++ + +T I IV + G L S + R++ + + GN ++ ++ VP
Sbjct: 434 K-PVVAKSIDIELTRNSIQPIIVTMSEDGTELTSEFTFRNNEDVSRNYGNFLLELSENVP 492
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
DGL++F PSY M++ W+ + E+I K+K ++E + + ++ Y
Sbjct: 493 DGLIVFMPSYSRMEEWARQWQKDKY------LEQISKNKVLLIESKDVNETSQKLQQY-R 545
Query: 577 KLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
K D GA F++ RGK++EG+DF H GR V + G P D + + ++L+
Sbjct: 546 KCCDVG-RGAALFSIARGKIAEGIDFEGHYGRCVAVIGFPALNSKDTLILERCKFLE--- 601
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
++K TK F+ + A R Q +GRV+R + DYG +I D+RFA S+ S
Sbjct: 602 ----EKFKITKNDFIEFD------AMRQTCQCLGRVLRGKQDYGIMIMADKRFAQKSKLS 651
Query: 697 QISLWIQPHI---QCYSKFGDVVYTLTR-FFRE 725
++ WI + +C + + T+ R FFR+
Sbjct: 652 KMPRWIYKQLDQSRCLNITSETAITVVRDFFRQ 684
>gi|222630644|gb|EEE62776.1| hypothetical protein OsJ_17579 [Oryza sativa Japonica Group]
Length = 774
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 194/711 (27%), Positives = 318/711 (44%), Gaps = 106/711 (14%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC 150
P + +TSRTHSQL Q + ELK + + R + V LGSR+ LCI+++V L GSA N C
Sbjct: 89 PKVFFTSRTHSQLSQFVGELKKTEFGWRLRTVCLGSRKNLCINKDV-LKLGSANRINERC 147
Query: 151 RFLCK---------KGTNRR-CNHHSRVADYMKNNPHLGDE---------PIDIEDLVNI 191
L K +G NR+ C + M L E +DIEDL +
Sbjct: 148 LELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRKRGLQKEFKSEVSEQGALDIEDLAQL 207
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G+ G CPY+ R++ +T D+V PY L+ R+ LG+ KNS++I DEAHNL
Sbjct: 208 GKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEAHNLADSLT 267
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
+ ++S L A +S + ++ R QS L N ++ L + L + V
Sbjct: 268 SMYNSKITSSQLNAILSHLEAYLN-----RFQS---VLGAGNRRYIQTLTV-LTRSFLRV 318
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
++++ T I + L L+I KL V+ + + + NK + +
Sbjct: 319 LTSNQDDACTMTSMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKLNINQDGV 378
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK--------GKASRTLSWWCFNP 423
+S+ + D+G++ +++ + AD L+ G+ + P
Sbjct: 379 NHLSHQQQY---DEGSSIASFQTL---------ADFLRSLLNCNDNGRIIVARKKFSGQP 426
Query: 424 GIAMQEFSRL-----------EVGSIILTSGTLSPMDSFAQELKLNFPLR----VENPHV 468
A +F L + ++IL GTL P++ L N P H+
Sbjct: 427 EDAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPPSDIKFFTCNHI 486
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ + I V GPSG + SY +R S +ELG + N+ VP+G+++FF SY
Sbjct: 487 VPPESILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPEGVVMFFASYEY 546
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK-------DT 581
W + + +I K K EP+ S + + Y ++ DT
Sbjct: 547 ERFVYDAWAASG------MISKISKKKHVFREPKNSVDVEMTLNKYKEAIQSCSKSSQDT 600
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ---- 637
+GA+ AV GK+SEG++F+D GR VV+ G+P+ + +D ++ +Y++ ++
Sbjct: 601 GVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTETIKYIENISKPVLV 660
Query: 638 ----SQGGEY-KETKLS---------FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
S +Y E KL G ++Y +AVNQ++GR IRH +DY A++
Sbjct: 661 GGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSIGRAIRHANDYAAML 720
Query: 684 FCDERFAHPSRK-------SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
D R+AH S ++ WI+ + C +G+V L +FF+ R
Sbjct: 721 LVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACAQNYGEVHRLLHQFFKLNR 771
>gi|303271817|ref|XP_003055270.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463244|gb|EEH60522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 741
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 205/771 (26%), Positives = 341/771 (44%), Gaps = 131/771 (16%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ + G+ V FP+E Y Q YM+++ + L K + LE PTGTGKT+ L
Sbjct: 3 FNLEGLTVYFPYEYLYPEQYKYMQELKRGLDAKGHGCLEMPTGTGKTITCL--------- 53
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
+ + S Q + ++Y +RT ++ +V+ EL+ YR
Sbjct: 54 -------------------ALITSYQLAHPECGKLIYCTRTVPEMEKVLAELRVLQAYRE 94
Query: 122 K-------MVILG--SREQLCIHREVSLLRGSAQNNACRFLCKKGTNR--RCNHHSRVA- 169
K M+ LG SR+ +C+H V+ GS ++ R C++ T R H+S +A
Sbjct: 95 KHVGEAAAMLALGLSSRKNMCVHPRVAE-EGSRESVDAR--CRQLTASWVREKHNSALAS 151
Query: 170 -------------DYMKNNPHLGDEP--IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVF 214
DY + P P + DL GRT G CPYF R + K +++
Sbjct: 152 GEEPTTELCQFFEDYEREGPDAVLPPGVYTLADLRQFGRTKGWCPYFTARHMIKCSNVIV 211
Query: 215 APYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNC 273
Y YL+DP + E K +++FDEAHN++ +C +A S +L L +N
Sbjct: 212 YNYQYLLDPKVSSLVSRELEKECVVVFDEAHNIDNVCIEALSVNLRQQTLDVA---GRNI 268
Query: 274 IDISST--RRGQSSDETLNPDNFAILRALLLKL-------EKRIAEVPINSKELGFTKPG 324
+S+ R Q+ + L + A++ L + E IA I + L PG
Sbjct: 269 TALSAKIERAKQTDERRLRAEYDALVNGLANQGVLPRGGGEDAIANPVIPADILREAVPG 328
Query: 325 ----------------PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTA 368
Y+ + L + QET + A L Q + + K+
Sbjct: 329 NIRRAEHFVAFMRRLVEYLKQRLKATQVEQETPMAFL------AHLSQTAAI-DGKTLKF 381
Query: 369 C--RIESISNILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLS 417
C R+ S+ L+I+ ++ A S A + V + A +L+ R L
Sbjct: 382 CHDRLTSLLKTLEIVDTEEFNAVSLVADFGTLVGTYEKGFALILEPYDERYPNIPDPVLQ 441
Query: 418 WWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWA 476
C + +A+ F R + ++ +TSGTLSP+D + + L N + P +T +
Sbjct: 442 LSCLDASLAIAPVFERFD--NVFITSGTLSPIDLYPKLLSFNPVACISLPMTLTRDCLCP 499
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
++ G +++ + RD Q G ++++A VPDGL+ FF SY M+Q ++ W
Sbjct: 500 IVITRGADQQAVSTKFDMRDDPGVIQNYGRILIDMAASVPDGLVAFFVSYSYMEQIVSKW 559
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKV 596
T + + + +HK +E + LA+++Y + GAVF +V RGKV
Sbjct: 560 HETG------VLQNVMQHKLVFIETQDVVETSLALDNY--RRACNCGRGAVFLSVARGKV 611
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDW 656
+EG+DF H GRAV++ G+P+ +R + EYL Q + ++ L+F
Sbjct: 612 AEGIDFDRHYGRAVIMYGVPYQYTLSRILRARLEYLRETFQIKEADF----LAF------ 661
Query: 657 YNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRVIR + DYG ++F D+R+ ++ ++ WI H++
Sbjct: 662 ---DAVRQAAQCVGRVIRSKADYGLMVFADKRYNSHDKRGKLPGWITTHLK 709
>gi|354544295|emb|CCE41018.1| hypothetical protein CPAR2_300070 [Candida parapsilosis]
Length = 794
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 200/764 (26%), Positives = 337/764 (44%), Gaps = 126/764 (16%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K +R
Sbjct: 60 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRR----------- 161
+ + L SR+ LC++ L+ + N +C++ TN +
Sbjct: 95 SELGYVEDFRGLGLTSRKNLCLN---PLISREKKGNVVDEMCRRVTNGQLKEKIEKGVVT 151
Query: 162 -------------CNHHSRVADYMKNNPH--LGDEPIDIEDLVNIGRTFGPCPYFMTREL 206
C+ H ++ D +PH + + L+ + G CPYF R +
Sbjct: 152 EEDQIQDPAKYSLCSFHEKLYDL---DPHDLIPQGVYSFDALIRYCKEMGTCPYFTARRM 208
Query: 207 QKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTA 265
+I+ Y+YL+DP + E K+SI+IFDEAHN++ +C ++ S DL+ +L
Sbjct: 209 IPFCNIIIYSYHYLLDPKIADRVSRELSKDSIIIFDEAHNIDNVCIESLSLDLTEDVLKR 268
Query: 266 CISEAKNCIDISSTRRGQSSDETLNPDNFAI--LRALLLKLEKRI-AEVPINSKEL---- 318
A D + Q S++ N + LR ++ E+ + PI ++L
Sbjct: 269 ATRGANKLADAVEDMKAQDSEKLQNEYEQLVEGLRQAEVEREQEMFMSNPILPQDLLDEA 328
Query: 319 --GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--R 370
G + G + L +T K++ ++ E LQ K +KK C R
Sbjct: 329 IPGNIRKGEHFVAFLKRFIEYLKTRMKVLHVISETPTSFLQHLKELTYIDKKPLKFCSER 388
Query: 371 IESISNILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCF 421
+ + L++ + A A + V D +L+ + L + C
Sbjct: 389 LSLLVKTLELTEIEDFNALKDIATFATLVSTYDTGFQLILEPFETEGSTVPNPMLHFTCL 448
Query: 422 NPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGI 478
+ IA++ F R S+I+TSGT+SP+D + + LNF ++ + +T + I
Sbjct: 449 DASIAIKPVFERF--SSVIITSGTISPLDMYPK--MLNFQTVIQESYAMTLARRSFLPMI 504
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
V G ++S + R+ + G+ ++ A+I PDG+++FFPSY M+ I+ W+
Sbjct: 505 VTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVFFPSYLYMESIISMWQ- 563
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
+ G L +W KHK +VE + LA+E Y ++ GAV +V RGKVSE
Sbjct: 564 -TMGVLDEVW----KHKLILVETPDAQETSLALETYRKAC--SNGRGAVLLSVARGKVSE 616
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G+DF H GR V++ G+PF ++ + E++ Q + ++ LSF
Sbjct: 617 GIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKENDF----LSF-------- 664
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RFA +K+Q+ WI
Sbjct: 665 -DAMRHAAQCLGRVLRGKDDYGIMVLADRRFAR--KKAQLPKWI 705
>gi|345480734|ref|XP_001605333.2| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Nasonia vitripennis]
Length = 759
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 203/755 (26%), Positives = 343/755 (45%), Gaps = 112/755 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM + + L K + LLE P+GTGKT+ LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLDLKRGLDAKGHCLLEMPSGTGKTITLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
++ ++Y SRT ++ +VI+ELK
Sbjct: 60 ----------------------MLEHPHQVTKLIYCSRTVPEIEKVIEELKKLIDYYEKE 97
Query: 117 SNYRPKMV--ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADY 171
+ PK++ +L SR+ +CIH EVS R G ++ C L R N+ + V +
Sbjct: 98 TKVLPKIIGLVLSSRKNMCIHPEVSKEREGKIVDSQCHALTASYVRERHNYDESTPVCGF 157
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E + I+D+ G+ CPYF+ R I+ Y+YL+DP
Sbjct: 158 YETFDIEGREMMMPPGIYSIDDMKEYGKDRNWCPYFLARYTIMHAQIIVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSS----------GLLTACISEAKNCI 274
+ + E K+S+++FDEAHN++ +C D+ S L+ LL ++E K
Sbjct: 218 AEAVSKELAKSSVVVFDEAHNIDNVCIDSMSVKLNRRTMEKSCANLSLLEKTVAEMKE-- 275
Query: 275 DISSTRRGQSS-------DETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKP 323
D ++ + + + D + + +L +L E VP N ++ +GF K
Sbjct: 276 DDANKLKDEYNKLVEGLKDAQVARETDVVLANPVLPNEVLEDVVPGNIRKAEHFVGFLKR 335
Query: 324 G-PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNILK 379
Y+ L ++ QET + +V A++ E K ++ + R I+++
Sbjct: 336 FVEYLKMRLRIQHVVQETPVTFLR--DVQAKICIERKPLRFCAERLASLLRTMEITDLTD 393
Query: 380 ----IIFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FS 431
I+ T + Y + + + D A V + L + C + IAM+ F
Sbjct: 394 FSPLILVTHLATLVATYTKGFTIIIEPFDDKAPTV----HNPILYFSCLDSSIAMKPIFD 449
Query: 432 RLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
R + S+++TSGTLSP+D + + L + + + + IV G ++S
Sbjct: 450 RFQ--SVVITSGTLSPLDMYPKILNFHPVIMSSFTMTLARPCLLPMIVSKGNDQVAISSK 507
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
Y R+ + + G +V A VPDG++ FF SY M+ +A W + I ++I
Sbjct: 508 YETREDVAVIRNYGQLLVEFAANVPDGIVCFFTSYLYMESVVAAWYDQG------ILDQI 561
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
++K +E + ++ LA+ Y K D GAV +V RGKVSEG+DF H GRAV+
Sbjct: 562 QRYKLIFIETQDAAETSLALY-YYNKACDNG-RGAVLLSVARGKVSEGVDFDHHLGRAVL 619
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
+ G+P+ ++ + EYL Q Q + ++ L+F A R Q VGR
Sbjct: 620 MFGIPYVYTQSRILKARLEYLRDQFQIKENDF----LTF---------DAMRHAAQCVGR 666
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
IR + DYG ++F D+RF+ +KS++ WIQ ++
Sbjct: 667 AIRGKTDYGIMVFADKRFSRIDKKSKLPKWIQEYL 701
>gi|344228422|gb|EGV60308.1| DNA helicase component of transcription factor b [Candida tenuis
ATCC 10573]
Length = 797
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 202/759 (26%), Positives = 335/759 (44%), Gaps = 116/759 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + ++Y SRT S++ + + EL YR
Sbjct: 60 -------------------------QMHYPEHRKVVYCSRTMSEIEKALIELYNLMEYRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
+ + L SR+ LC+H +S R G+ + CR + R
Sbjct: 95 NELGFVEDFRGLGLTSRKNLCLHPTISKERKGAVVDEKCRRITNGQLKHRIEEGAIDEEA 154
Query: 162 ----------CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
C H + DY +++ + E L++ GR CPYF R + +
Sbjct: 155 QRSNPEVNSLCKFHENLYDYEQHD-LIPPGVYSFESLMDFGREKSTCPYFTVRRMIPFCN 213
Query: 212 IVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
I+ Y+YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL+ L A
Sbjct: 214 IIIYSYHYLLDPKIAERVSKELSKDSIIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGA 273
Query: 271 KNCIDISSTRRGQSSDETLNPDNFAI--LR-ALLLKLEKRIAEVPINSKEL------GFT 321
D + Q S++ N + LR A + + E+ P ++L G
Sbjct: 274 NKLSDAIEDMKAQDSEKLQNEYEKLVEGLRQAEIARDEELFMANPTLPQDLLDEAIPGNI 333
Query: 322 KPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESIS 375
+ G + L +T K++ ++ E LQ K ++K C R+ +
Sbjct: 334 RKGEHFVSFLKRFIEYLKTRMKVLHVISETPNSFLQHLKELTFIDRKPLRFCSERLSLLV 393
Query: 376 NILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIA 426
L++ + TA A + V D +L+ + L + C + IA
Sbjct: 394 RTLELNDIEDFTALKDIATFATLVSTYDKGFQLILEPFETEGATVPNPILRFTCLDASIA 453
Query: 427 MQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGP 483
M+ F R S+I+TSGT+SP+D + + LNF ++ + +T + IV G
Sbjct: 454 MKPVFDRF--SSVIITSGTISPLDMYPK--MLNFETVIQRSYTMTLDRRSFLPMIVTKGS 509
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
++S + R+ + G+ ++ ++I PDG+++FFPSY M+ I+ W+ + G
Sbjct: 510 DQVSISSRFEIRNDPSVVRNYGSLLIEFSKITPDGMVVFFPSYLYMESIISMWQ--TMGV 567
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
L +W K+K +VE + LA++ Y S GAV +V RGKVSEG+DF
Sbjct: 568 LDEVW----KYKLILVETPDAQETSLALDTYRKAC--NSGRGAVLLSVARGKVSEGIDFD 621
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
H GR V++ G+PF ++ + E+L Q + ++ LSF A R
Sbjct: 622 HHYGRTVLMIGIPFQYTESRILKARLEFLRENNQIRENDF----LSF---------DAMR 668
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RFA ++SQ+ WI
Sbjct: 669 HAAQCLGRVLRGKDDYGIMVLADRRFAR--KRSQLPKWI 705
>gi|307191862|gb|EFN75286.1| Probable ATP-dependent RNA helicase DDX11 [Harpegnathos saltator]
Length = 862
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 181/693 (26%), Positives = 313/693 (45%), Gaps = 93/693 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I + SRTHSQL Q + EL+ S Y + V L SR+ CI++ V L+ S N C L
Sbjct: 199 IFFCSRTHSQLTQFVHELQRSPYSQDISVVPLSSRQNYCINKNVKKLKHVSLINETCLQL 258
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHL-GDEPI----------DIEDLVNIGRTFGPCPYFM 202
+K T + + + P + GD+ + DIE++V G+ CPY+
Sbjct: 259 QRKKTTVKKEKDLKKSKTASGCPFIPGDQKLLMAEVLTNIQDIEEIVQKGQENNTCPYYG 318
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
+R+ + ++ PYN ++ R LG++ K S+LI DEAHNL S ++
Sbjct: 319 SRKSVQNGQLILVPYNSILHRNTRISLGIDLKESVLIIDEAHNLLDAIEGMYSSVITGRN 378
Query: 263 LTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLL-------------------- 302
L C S+ + S LN +F + + L+L
Sbjct: 379 LLHCYSQLSQYQKKFESLFSAKSVLFLNQLSFCLKKFLILFGATINSHPNDEVNKTIVPK 438
Query: 303 --KLEKRIAEVPINS----KELGFTKPGPYIYELLA-------DLNITQETAYKLIDIVE 349
KLE+ I++ K L F K +++L ++ I ++ K I E
Sbjct: 439 LYKLEEFELLTEIDTVNIFKLLEFVKASKLVHKLQGFVEQYGNNVKIGEQKVMK-SGITE 497
Query: 350 VAAELLQEDKLQNKKSTTA----CRIESISNILKII--FRDKGTAHSAYYRVHVREADAN 403
+ +D L + S+ A E +SN L I F + + R++V +
Sbjct: 498 FLNSIKNKDALSQEASSVADAPNNNEEPMSNPLMAILSFLESLKSSCLDGRIYVLPSATI 557
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
++K + NP + + S++L GT+ PM F +L L +
Sbjct: 558 GQGIIK--------FLLLNPAAHFHDIVE-DARSVVLAGGTMEPMSEFIDQLFLMAGATI 608
Query: 464 EN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD 517
+ HVI + I + +V GP+G S+ NR + ELG T++N+ IVP
Sbjct: 609 DRIMTFSCDHVIPKENIISNVVMRGPTGIEFEFSFHNRQDTKLLDELGRTLINLCNIVPA 668
Query: 518 GLLIFFPSYYLMDQCIACWKNTSH-GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
G+++FFPSY D +K+ S G ++ I + C ++ EP+ +S + ++ Y
Sbjct: 669 GVIVFFPSYKFED---TVFKHLSKSGVISKISAKKCIYR----EPKLASQVSVILDQYAH 721
Query: 577 KLKDTST--SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
+K+ + +G++ F+V GK+SEGL+F+D GR V++ G+P+ + +++ K +YL+
Sbjct: 722 SIKNPQSPCNGSLLFSVVGGKLSEGLNFSDDLGRCVIVVGLPYPNIKSLELQEKMKYLNE 781
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
+ +G +Y +AVNQ +GR +RH +DY ++ D+R+ H +
Sbjct: 782 NVKPD------------AGSKFYENSCMKAVNQCIGRSVRHINDYSTVVLLDKRYCH--K 827
Query: 695 KSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+ WIQ ++ FG V+ ++ +FF +R
Sbjct: 828 IKVLPQWIQRSVKINESFGSVISSIAKFFATKR 860
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW-----RKSLGSFS 67
FPF AY+ Q +M+++ L+ L ESPTGTGK+L L+C L W + S
Sbjct: 9 FPFPAYEIQKQFMKELYNCLEGGKLGLFESPTGTGKSLSLICGALKWLVDHEKYKKQELS 68
Query: 68 TLGSQVNNQISG-------------SQSSVNSS-QSGDSKLPTILYTSRTHSQLRQVIQE 113
++ S+++++I Q +N+ Q +KL IL + +++I+
Sbjct: 69 SVISEIDDKIKNCEKPSDDWFSVQTEQIQLNAEKQKFQAKLNAILEFESEKEKFKKIIEL 128
Query: 114 LKTSNYR 120
KTS +
Sbjct: 129 NKTSKTK 135
>gi|406605469|emb|CCH43113.1| DNA excision repair protein [Wickerhamomyces ciferrii]
Length = 781
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 197/755 (26%), Positives = 339/755 (44%), Gaps = 115/755 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL YR
Sbjct: 60 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHNLMTYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSL-LRGSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H VS +GS + CR + R+
Sbjct: 95 KELGYVEDFRGLGLTSRKNLCLHPTVSKEKKGSIVDEKCRRMTSGLAKRKIESGETENVD 154
Query: 162 -CNHHSRVADYMKNN---PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPY 217
C H + + +N P + + L N + CPYF R + +I+ Y
Sbjct: 155 LCEFHENLYELEPDNLVPPGV----YSFDSLTNYCKDQKTCPYFTVRRMIPFCNIIIYSY 210
Query: 218 NYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI 276
+YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ +L S+ N +
Sbjct: 211 HYLLDPKISERVSKELSKDSIIIFDEAHNIDNVCIESLSLDLNNDVLKKA-SKGANSLSK 269
Query: 277 SSTRRGQSSDETLNPDNFAILRAL----LLKLEKRIAEVPINSKEL------GFTKPGPY 326
++ + L + ++ L ++ E+++ E P+ S++L G + +
Sbjct: 270 RIEEVKKTDSKKLQDEYEKLVSGLSAADIINNEQQMMETPVLSEDLLKEAIPGNIRRAEH 329
Query: 327 IYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI 380
L +T K++ ++ E LQ K +K C R+ + L+I
Sbjct: 330 FVSFLKRFIEYLKTRMKVLHVISETPTSFLQHVKQLTFIERKPLRFCSERLSLLVRTLEI 389
Query: 381 IFRDKGTA--HSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-F 430
+ A A + V + A +L+ + L + C + IA++ F
Sbjct: 390 TDVEDYNALKDVATFATLVSTYEQGFALILEPYETENATVPNPILRFTCLDASIAIKPIF 449
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGPSGYLL 488
R S+I+TSGT+SP+D + + LNF ++ + +T + +V G +
Sbjct: 450 ERF--SSVIITSGTISPLDMYPR--MLNFETVIQESYSMTLAKRSFLPLVVTKGSDQVAI 505
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
+S + R+ + G+ ++ ++I PDG+++FFPSY M+ I+ W+ + G L +W
Sbjct: 506 SSRFEIRNDPSIVRNYGSLLIEFSKITPDGMVVFFPSYLYMESIISMWQ--TMGILDEVW 563
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
K+K +VE + LA+E Y ++ GA+ +V RGKVSEG+DF H GR
Sbjct: 564 ----KYKLILVETPDAQETALALETYRTAC--SNGRGAILLSVARGKVSEGIDFDHHYGR 617
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
V++ G+PF ++ + E+L Q + ++ LSF A R Q
Sbjct: 618 TVLMIGIPFQYTESRILKARLEFLRDHYQIRENDF----LSF---------DAMRHAAQC 664
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+GRV+R + DYG +I D RF +++Q+ WIQ
Sbjct: 665 LGRVLRGKDDYGVMILADRRFGR--KRNQLPKWIQ 697
>gi|190405726|gb|EDV08993.1| DNA repair helicase RAD3 [Saccharomyces cerevisiae RM11-1a]
gi|207345787|gb|EDZ72494.1| YER171Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 780
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 196/752 (26%), Positives = 339/752 (45%), Gaps = 110/752 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRT 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H EVS R G+ + CR + R+
Sbjct: 95 KELGYQEDFRGLGLTSRKNLCLHPEVSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + + ++ +L E L+ CPYF+ R + +I+ Y+YL
Sbjct: 155 LCEYHENLYN-IEVEDYLPKGVFSFEKLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--IS 277
+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ L + N +D IS
Sbjct: 214 LDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTTDALRRA-TRGANALDERIS 272
Query: 278 STRRGQSSDETLNPDNFAILRAL-----LLKLEKRIAEVPINSKEL------GFTKPGPY 326
R+ S + L + +++ L L E+ E P+ ++L G + +
Sbjct: 273 EVRKVDS--QKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTEAIPGNIRRAEH 330
Query: 327 IYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI 380
L L +T K++ ++ E LQ K +K C R+ + L++
Sbjct: 331 FVSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCSERLSLLVRTLEV 390
Query: 381 IFRDKGTAHS--AYYRVHVREADANAADVLK-------GKASRTLSWWCFNPGIAMQE-F 430
+ TA A + + + +++ + + + C + IA++ F
Sbjct: 391 TEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIMRFTCLDASIAIKPVF 450
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNS 490
R S+I+TSGT+SP+D + + L L+ + K I+ G ++S
Sbjct: 451 ERF--SSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPMIITKGSDQVAISS 508
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
+ R+ + G+ +V A+I PDG+++FFPSY M+ ++ W+ + G L +W
Sbjct: 509 RFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQ--TMGILDEVW-- 564
Query: 551 ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV 610
KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF GR V
Sbjct: 565 --KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHQYGRTV 620
Query: 611 VITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
++ G+PF ++ + E++ Y+ + FLS + A R Q +G
Sbjct: 621 LMIGIPFQYTESRILKARLEFM-------RENYRIRENDFLSFD------AMRHAAQCLG 667
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
RV+R + DYG ++ D RF+ ++SQ+ WI
Sbjct: 668 RVLRGKDDYGVMVLADRRFSR--KRSQLPKWI 697
>gi|398365073|ref|NP_011098.3| Rad3p [Saccharomyces cerevisiae S288c]
gi|131812|sp|P06839.1|RAD3_YEAST RecName: Full=DNA repair helicase RAD3; AltName: Full=General
transcription and DNA repair factor IIH subunit RAD3;
Short=TFIIH subunit RAD3
gi|4269|emb|CAA26215.1| unnamed protein product [Saccharomyces cerevisiae]
gi|172331|gb|AAA34943.1| RAD3 protein [Saccharomyces cerevisiae]
gi|603412|gb|AAB64698.1| Rad3p: DNA repair helicase component of transcription factor b
[Saccharomyces cerevisiae]
gi|151944888|gb|EDN63147.1| transcription initiation factor TFIIH subunit [Saccharomyces
cerevisiae YJM789]
gi|256271309|gb|EEU06379.1| Rad3p [Saccharomyces cerevisiae JAY291]
gi|259146100|emb|CAY79360.1| Rad3p [Saccharomyces cerevisiae EC1118]
gi|285811805|tpg|DAA07833.1| TPA: Rad3p [Saccharomyces cerevisiae S288c]
gi|323305313|gb|EGA59060.1| Rad3p [Saccharomyces cerevisiae FostersB]
gi|323355348|gb|EGA87173.1| Rad3p [Saccharomyces cerevisiae VL3]
gi|349577832|dbj|GAA23000.1| K7_Rad3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299876|gb|EIW10968.1| Rad3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 778
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 196/752 (26%), Positives = 339/752 (45%), Gaps = 110/752 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRT 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H EVS R G+ + CR + R+
Sbjct: 95 KELGYQEDFRGLGLTSRKNLCLHPEVSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + + ++ +L E L+ CPYF+ R + +I+ Y+YL
Sbjct: 155 LCEYHENLYN-IEVEDYLPKGVFSFEKLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--IS 277
+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ L + N +D IS
Sbjct: 214 LDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTTDALRRA-TRGANALDERIS 272
Query: 278 STRRGQSSDETLNPDNFAILRAL-----LLKLEKRIAEVPINSKEL------GFTKPGPY 326
R+ S + L + +++ L L E+ E P+ ++L G + +
Sbjct: 273 EVRKVDS--QKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTEAIPGNIRRAEH 330
Query: 327 IYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI 380
L L +T K++ ++ E LQ K +K C R+ + L++
Sbjct: 331 FVSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCSERLSLLVRTLEV 390
Query: 381 IFRDKGTAHS--AYYRVHVREADANAADVLK-------GKASRTLSWWCFNPGIAMQE-F 430
+ TA A + + + +++ + + + C + IA++ F
Sbjct: 391 TEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIMRFTCLDASIAIKPVF 450
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNS 490
R S+I+TSGT+SP+D + + L L+ + K I+ G ++S
Sbjct: 451 ERF--SSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPMIITKGSDQVAISS 508
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
+ R+ + G+ +V A+I PDG+++FFPSY M+ ++ W+ + G L +W
Sbjct: 509 RFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQ--TMGILDEVW-- 564
Query: 551 ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV 610
KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF GR V
Sbjct: 565 --KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHQYGRTV 620
Query: 611 VITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
++ G+PF ++ + E++ Y+ + FLS + A R Q +G
Sbjct: 621 LMIGIPFQYTESRILKARLEFM-------RENYRIRENDFLSFD------AMRHAAQCLG 667
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
RV+R + DYG ++ D RF+ ++SQ+ WI
Sbjct: 668 RVLRGKDDYGVMVLADRRFSR--KRSQLPKWI 697
>gi|125551293|gb|EAY97002.1| hypothetical protein OsI_18924 [Oryza sativa Indica Group]
Length = 877
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 194/711 (27%), Positives = 318/711 (44%), Gaps = 106/711 (14%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC 150
P + +TSRTHSQL Q + ELK + + R + V LGSR+ LCI+++V L GSA N C
Sbjct: 192 PKVFFTSRTHSQLSQFVGELKKTEFGWRLRTVCLGSRKNLCINKDV-LKLGSANRINERC 250
Query: 151 RFLCK---------KGTNRR-CNHHSRVADYMKNNPHLGDE---------PIDIEDLVNI 191
L K +G NR+ C + M L E +DIEDL +
Sbjct: 251 LELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRKRGLQKEFKSEVSEQGALDIEDLAQL 310
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G+ G CPY+ R++ +T D+V PY L+ R+ LG+ KNS++I DEAHNL
Sbjct: 311 GKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEAHNLADSLT 370
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
+ ++S L A +S + ++ R QS L N ++ L + L + V
Sbjct: 371 SMYNSKITSSQLNAILSHLEAYLN-----RFQS---VLGAGNRRYIQTLTV-LTRSFLRV 421
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
++++ T I + L L+I KL V+ + + + NK + +
Sbjct: 422 LTSNQDDACTMTSMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKLNINQDGV 481
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK--------GKASRTLSWWCFNP 423
+S+ + D+G++ +++ + AD L+ G+ + P
Sbjct: 482 NHLSHQQQY---DEGSSIASFQTL---------ADFLRSLLNCNDNGRIIVARKKFSGQP 529
Query: 424 GIAMQEFSRL-----------EVGSIILTSGTLSPMDSFAQELKLNFPLR----VENPHV 468
A +F L + ++IL GTL P++ L N P H+
Sbjct: 530 EDAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPPSDIKFFTCNHI 589
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ + I V GPSG + SY +R S +ELG + N+ VP+G+++FF SY
Sbjct: 590 VPPESILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPEGVVMFFASYEY 649
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK-------DT 581
W + + +I K K EP+ S + + Y ++ DT
Sbjct: 650 ERFVYDAWAASG------MISKISKKKHVFREPKNSVDVEMTLNKYKEAIQSCSKSSQDT 703
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ---- 637
+GA+ AV GK+SEG++F+D GR VV+ G+P+ + +D ++ +Y++ ++
Sbjct: 704 GVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTETIKYIENISKPVLV 763
Query: 638 ----SQGGEY-KETKLS---------FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
S +Y E KL G ++Y +AVNQ++GR IRH +DY A++
Sbjct: 764 GGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSIGRAIRHANDYAAML 823
Query: 684 FCDERFAHPSRK-------SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
D R+AH S ++ WI+ + C +G+V L +FF+ R
Sbjct: 824 LVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACAQNYGEVHRLLHQFFKLNR 874
Score = 46.2 bits (108), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNAL--LESPTGTGKTLCLLCATLAW 59
FPF Y Q +M + +L + AL LESPTGTGKTL ++C+ L W
Sbjct: 18 FPFAPYPIQSEFMSFLYGALSSGPGALALLESPTGTGKTLSIICSALQW 66
>gi|46981234|gb|AAT07552.1| unknown protein [Oryza sativa Japonica Group]
Length = 845
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 194/711 (27%), Positives = 318/711 (44%), Gaps = 106/711 (14%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC 150
P + +TSRTHSQL Q + ELK + + R + V LGSR+ LCI+++V L GSA N C
Sbjct: 160 PKVFFTSRTHSQLSQFVGELKKTEFGWRLRTVCLGSRKNLCINKDV-LKLGSANRINERC 218
Query: 151 RFLCK---------KGTNRR-CNHHSRVADYMKNNPHLGDE---------PIDIEDLVNI 191
L K +G NR+ C + M L E +DIEDL +
Sbjct: 219 LELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRKRGLQKEFKSEVSEQGALDIEDLAQL 278
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G+ G CPY+ R++ +T D+V PY L+ R+ LG+ KNS++I DEAHNL
Sbjct: 279 GKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEAHNLADSLT 338
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
+ ++S L A +S + ++ R QS L N ++ L + L + V
Sbjct: 339 SMYNSKITSSQLNAILSHLEAYLN-----RFQS---VLGAGNRRYIQTLTV-LTRSFLRV 389
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
++++ T I + L L+I KL V+ + + + NK + +
Sbjct: 390 LTSNQDDACTMTSMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKLNINQDGV 449
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK--------GKASRTLSWWCFNP 423
+S+ + D+G++ +++ + AD L+ G+ + P
Sbjct: 450 NHLSHQQQY---DEGSSIASFQTL---------ADFLRSLLNCNDNGRIIVARKKFSGQP 497
Query: 424 GIAMQEFSRL-----------EVGSIILTSGTLSPMDSFAQELKLNFPLR----VENPHV 468
A +F L + ++IL GTL P++ L N P H+
Sbjct: 498 EDAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPPSDIKFFTCNHI 557
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ + I V GPSG + SY +R S +ELG + N+ VP+G+++FF SY
Sbjct: 558 VPPESILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPEGVVMFFASYEY 617
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK-------DT 581
W + + +I K K EP+ S + + Y ++ DT
Sbjct: 618 ERFVYDAWAASG------MISKISKKKHVFREPKNSVDVEMTLNKYKEAIQSCSKSSQDT 671
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ---- 637
+GA+ AV GK+SEG++F+D GR VV+ G+P+ + +D ++ +Y++ ++
Sbjct: 672 GVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTETIKYIENISKPVLV 731
Query: 638 ----SQGGEY-KETKLS---------FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
S +Y E KL G ++Y +AVNQ++GR IRH +DY A++
Sbjct: 732 GGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSIGRAIRHANDYAAML 791
Query: 684 FCDERFAHPSRK-------SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
D R+AH S ++ WI+ + C +G+V L +FF+ R
Sbjct: 792 LVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACAQNYGEVHRLLHQFFKLNR 842
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 38 ALLESPTGTGKTLCLLCATLAW 59
ALLESPTGTGKTL ++C+ L W
Sbjct: 16 ALLESPTGTGKTLSIICSALQW 37
>gi|401625969|gb|EJS43941.1| rad3p [Saccharomyces arboricola H-6]
Length = 777
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 196/752 (26%), Positives = 340/752 (45%), Gaps = 110/752 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYNYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRT 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H EVS R G+ + CR + R+
Sbjct: 95 KELGYQEDFRGLGLTSRKNLCLHPEVSKERKGTVVDEKCRRMTNGQAKRKLEEDSNANVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + + ++ +L E L+ CPYF+ R + +I+ Y+YL
Sbjct: 155 LCEYHENLYN-IEVEDYLPKGVFSFEKLLRYCEEKTLCPYFIVRRMISLCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--IS 277
+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ L + N +D IS
Sbjct: 214 LDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTTDALRRA-TRGANALDERIS 272
Query: 278 STRRGQSSDETLNPDNFAILRAL-----LLKLEKRIAEVPINSKEL------GFTKPGPY 326
R+ S + L + +++ L L + E+ E P+ ++L G + +
Sbjct: 273 EVRKVDS--QKLQDEYEKLVQGLHSADILTEQEEPFVETPVLPQDLLTEAIPGNIRRAEH 330
Query: 327 IYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI 380
L L +T K++ ++ E LQ K +K C R+ + L++
Sbjct: 331 FVSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCSERLSLLVRTLEV 390
Query: 381 IFRDKGTAHS--AYYRVHVREADANAADVLK-------GKASRTLSWWCFNPGIAMQE-F 430
+ TA A + + + +++ + + + C + IA++ F
Sbjct: 391 AEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIMRFTCLDASIAIKPVF 450
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNS 490
R S+I+TSGT+SP+D + + L L+ + K I+ G ++S
Sbjct: 451 ERF--SSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPMIITKGSDQVAISS 508
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
+ R+ + G+ +V A+I PDG+++FFPSY M+ ++ W+ + G L +W
Sbjct: 509 RFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQ--TMGILDEVW-- 564
Query: 551 ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV 610
KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF GR V
Sbjct: 565 --KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHQYGRTV 620
Query: 611 VITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
++ G+PF ++ + E++ Y+ + FLS + A R Q +G
Sbjct: 621 LMIGIPFQYTESRILKARLEFM-------RENYRIRENDFLSFD------AMRHAAQCLG 667
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
RV+R + DYG ++ D RF+ ++SQ+ WI
Sbjct: 668 RVLRGKDDYGVMVLADRRFSR--KRSQLPKWI 697
>gi|76155584|gb|AAX26876.2| SJCHGC05649 protein [Schistosoma japonicum]
Length = 267
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 145/235 (61%), Gaps = 6/235 (2%)
Query: 401 DANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
D A G +RT+S+WCF+PG A+QE R V IILTSGTL P + EL L FP
Sbjct: 21 DTQATTTAVGATNRTISYWCFSPGRAIQELIRQNVRCIILTSGTLYPFEPLEAELNLKFP 80
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
+ + NPHVI + Q+ ++P GP G LN +Y R++ Y+ LG +V +A++VP GLL
Sbjct: 81 ITLRNPHVINADQLNLSVIPRGPDGVKLNGTYSVRETPAYRNSLGLLLVQLAQVVPAGLL 140
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD 580
IFFPSY M QCI WKN+ +E++ + K+ +EPR+ + F +Y +
Sbjct: 141 IFFPSYAFMSQCIEFWKNSD------TYEKLSRFKQIFIEPREKNQFNKIFNEYRSIACS 194
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
S+ GA+ F+V RG+VSEGLD AD+ GR V I G+P+A + DP+V LK YLD Q
Sbjct: 195 ESSVGAILFSVMRGRVSEGLDLADNTGRGVAILGLPYAPIHDPRVLLKMAYLDEQ 249
>gi|2114484|gb|AAB58296.1| DNA helicase [Mus musculus]
Length = 760
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 201/757 (26%), Positives = 343/757 (45%), Gaps = 116/757 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYR-- 120
++ ++Y SRT ++ +VI+EL+ S Y
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQ 97
Query: 121 --PKMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
K+ LG SR+ LCIH EV+ LR G + C L + + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +G+ G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDIHGRQMPLPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE----AKNCIDISSTR 280
+ E + ++++FDEAHN++ +C D+ S +L+ L C S K + I T
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETD 277
Query: 281 RGQSSDE-----------TLNPDNFAILRALLLKLEKRIAEVP--INSKE--LGFTKPG- 324
+ DE ++ + A L +L E VP I + E LGF +
Sbjct: 278 EQRLRDEYRRLVEGLREASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLL 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK-STTACRIESISNILKI--- 380
Y+ L ++ QE+ + + L Q +Q K A R+ S+ + L+I
Sbjct: 338 EYVKWRLRVQHVVQESPPAFL------SGLAQRVCIQRKPLRFCAERLRSLLHTLEIADL 391
Query: 381 -------IFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE- 429
+ + T S Y + + + D + A+ L + C + +A++
Sbjct: 392 ADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTI----ANPVLHFSCMDASLAIKPV 447
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
F R + S+I+TSGTLSP+D + + L + + + I+ G ++
Sbjct: 448 FERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAIS 505
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
S + R+ I + GN ++ ++ +VPDG++ FF SY M+ +A W I E
Sbjct: 506 SKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQG------ILE 559
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
I ++K +E + + +A+E Y ++ GAV +V RGKVSEG+DF H GRA
Sbjct: 560 NIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAVLLSVARGKVSEGIDFVHHYGRA 617
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V++ G+P+ ++ + EYL Q Q + D+ A R Q V
Sbjct: 618 VIMFGVPYVYTQSRILKARLEYLRDQFQ-------------IRENDFLTFDAMRHAAQCV 664
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
GR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 665 GRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
>gi|432092892|gb|ELK25255.1| Fanconi anemia group J protein [Myotis davidii]
Length = 1114
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 187/308 (60%), Gaps = 22/308 (7%)
Query: 427 MQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
+Q FS + +V +I+LTSGTLSPM SF+ EL + F +++E HVI + Q+W G + GP
Sbjct: 465 LQAFSDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPK 524
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
G L +++++ ++ E++ E+G ++++ +IV G+L F PSY L+++ W +T
Sbjct: 525 GRNLCATFQHTETFEFQDEVGALLLSVCQIVGQGILCFLPSYKLLEKLKERWLSTG---- 580
Query: 545 TTIWERICKHKKPVVEPR--QSSLFPLAIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLD 601
+W + K +VEP+ + + F ++ Y +K GA+ AVCRGKVSEGLD
Sbjct: 581 --LWHNLELVKTVIVEPQGGEKTDFDELLQVYYDAIKCKGEKDGALLVAVCRGKVSEGLD 638
Query: 602 FADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQA 661
F+D RAV+ G+PF + D +V LKR+Y D ++ +G L G WY QA
Sbjct: 639 FSDDNARAVITIGIPFPNVKDLQVELKRQYNDQHSKLRG---------LLPGRQWYEIQA 689
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERF-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTL 719
RA+NQA+GR IRH++D+GA+I D+RF ++PSR S +S W++ IQ +S F + +L
Sbjct: 690 YRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQQIQHHSTFESALESL 749
Query: 720 TRFFREER 727
F ++ +
Sbjct: 750 AEFSKKHQ 757
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 10/189 (5%)
Query: 79 GSQSSVNSSQ---SGDSKLPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCI 134
SQ + N+++ G SK+P I + +RTH Q+ Q+ +EL+ + Y R M IL SR+ C+
Sbjct: 154 NSQDASNATKKDHGGKSKIPKIYFGTRTHKQIAQITRELRRTAYSRVPMTILSSRDHTCV 213
Query: 135 HREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVN 190
H EV + +N C L + C + V + + + DIE+LV+
Sbjct: 214 HPEV--VGNFNRNEKCMELLDGKNGKSCYFYHGVHKISGQHTFQTLQGMCKAWDIEELVS 271
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E
Sbjct: 272 LGKKLKACPYYTARELIEDADIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCA 331
Query: 251 ADAASFDLS 259
++AS+ ++
Sbjct: 332 RESASYSIT 340
>gi|164662899|ref|XP_001732571.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
gi|159106474|gb|EDP45357.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
Length = 837
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 192/756 (25%), Positives = 349/756 (46%), Gaps = 88/756 (11%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L K + +LE P+GTGKT+ LL +++++
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYSYMVDLKRTLDVKGHGVLEMPSGTGKTVSLLSLIISYQRF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQ--ELKTSNYR 120
GS+ S + S + + + +L T QL I+ ++ + + +
Sbjct: 63 YP-----GSRKLVYCSRTVSEIEKALAELKRLMAYRAKYNTKKQLSDGIEPMDVDSEDIQ 117
Query: 121 PKM-----VILGSREQLCIHREVSLLR-GSAQNNACR-----FLCKKGTN-----RRCNH 164
+M + L SR+ +C+H VS R G + CR + C+KG C+
Sbjct: 118 GQMEDILALGLSSRKNMCVHPTVSQERKGKVVDARCRDMTSAWACEKGRQDPGSVELCDF 177
Query: 165 HSRVADYMKNNP-HLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
H + K P HL + IE+L+ + G CPYF R + DI+ ++YL+D
Sbjct: 178 HEELG---KLEPGHLVPPGVWTIEELIEYSKDKGICPYFAVRRMMPFCDIIIYSFHYLLD 234
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLT---ACISEAKNCID-IS 277
P + + E K++I++FDEAHN++ +C ++ S DL+ +L C+++ + +D +
Sbjct: 235 PKVAEQVSKEISKDAIVVFDEAHNIDNVCIESLSIDLTRPILDNAYRCVNQLADKVDEVK 294
Query: 278 STRRGQSSDETLNPDNFAILRALLLKLEKRIAEV----PINSKEL------GFTKPGPYI 327
+ DE + ++ L + + R AE P+ +L G + +
Sbjct: 295 KVDSARLQDEYVR-----LVEGLQQQSDDREAESFMANPVLPDDLLQEAIPGNIRRAEHF 349
Query: 328 YELLADLNITQETAYKLIDIV-EVAAELLQ---EDKLQNKKSTTAC--RIESISNILKII 381
L +T +++ +V E A LQ E +K C R+ + L++
Sbjct: 350 VAFLRRFVEYLKTRMRVLHVVAETPASFLQHLKEITFIERKPLRFCAERLRMLVQTLELT 409
Query: 382 FRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIAMQE-FS 431
D+ +A A++ V D +L+ + + C + +A+ F
Sbjct: 410 RLDEYSALQTVAFFATLVSTYDKGFLLILEPFETEQATVPNPIFHFTCLDASLAIAPVFE 469
Query: 432 RLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
R S+I+TSGT+SP+D + + L+ + ++ +T + ++ G ++S
Sbjct: 470 RF--SSVIITSGTISPLDMYPKMLRFDTVVQESYTMTLTRQCFLPLVITRGSDQVAISSR 527
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
+ R+ + GN ++ +R +PDG++ FFPSY M+ +A W + G L +W
Sbjct: 528 FEVRNDPSVVRNYGNILIEYSRCIPDGIVAFFPSYLYMESIVAAWHDM--GILDEVW--- 582
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
+HK +E + +A+E+Y + GA+ +V RGKVSEG+DF + GRAV+
Sbjct: 583 -RHKLVFIETPDAPETSIALENYRRACDN--GRGAILLSVARGKVSEGIDFDHNYGRAVI 639
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
+ G+P+ ++ + E+L KE D+ A R Q VGR
Sbjct: 640 MFGVPYQYTESRILKARLEFL-----RDNFRIKEN--------DFLTFDAMRHAAQCVGR 686
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
V+R + DYG +IF D+RFA +++++ WI +I+
Sbjct: 687 VLRGKSDYGLMIFADKRFARSDKRAKLPKWIAQYIE 722
>gi|31542614|ref|NP_031975.2| TFIIH basal transcription factor complex helicase XPD subunit [Mus
musculus]
gi|341940664|sp|O08811.2|ERCC2_MOUSE RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|26349935|dbj|BAC38607.1| unnamed protein product [Mus musculus]
gi|148691193|gb|EDL23140.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Mus musculus]
Length = 760
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 200/757 (26%), Positives = 343/757 (45%), Gaps = 116/757 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYR-- 120
++ ++Y SRT ++ +VI+EL+ S Y
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQ 97
Query: 121 --PKMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
K+ LG SR+ LCIH EV+ LR G + C L + + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +G+ G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDIHGRQMPLPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE----AKNCIDISSTR 280
+ E + ++++FDEAHN++ +C D+ S +L+ L C S K + I T
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETD 277
Query: 281 RGQSSDE-----------TLNPDNFAILRALLLKLEKRIAEVP--INSKE--LGFTKPG- 324
+ DE ++ + A L +L E VP I + E LGF +
Sbjct: 278 EQRLRDEYRRLVEGLREASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLL 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK-STTACRIESISNILKI--- 380
Y+ L ++ QE+ + + L Q +Q K A R+ S+ + L+I
Sbjct: 338 EYVKWRLRVQHVVQESPPAFL------SGLAQRVCIQRKPLRFCAERLRSLLHTLEIADL 391
Query: 381 -------IFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE- 429
+ + T S Y + + + D + A+ L + C + +A++
Sbjct: 392 ADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTI----ANPVLHFSCMDASLAIKPV 447
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
F R + S+I+TSGTLSP+D + + L + + + I+ G ++
Sbjct: 448 FERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAIS 505
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
S + R+ I + GN ++ ++ +VPDG++ FF SY M+ +A W I E
Sbjct: 506 SKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQG------ILE 559
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
I ++K +E + + +A+E Y ++ GA+ +V RGKVSEG+DF H GRA
Sbjct: 560 NIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLSVARGKVSEGIDFVHHYGRA 617
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V++ G+P+ ++ + EYL Q Q + D+ A R Q V
Sbjct: 618 VIMFGVPYVYTQSRILKARLEYLRDQFQ-------------IRENDFLTFDAMRHAAQCV 664
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
GR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 665 GRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
>gi|308499977|ref|XP_003112174.1| hypothetical protein CRE_29819 [Caenorhabditis remanei]
gi|308268655|gb|EFP12608.1| hypothetical protein CRE_29819 [Caenorhabditis remanei]
Length = 385
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 167/288 (57%), Gaps = 14/288 (4%)
Query: 11 VEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLG 70
V+FPFE Y+CQ ++M+ V+ L K +A LESPTGTGKTL LLC+TLAW + L
Sbjct: 21 VKFPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQKQKEIKPLD 80
Query: 71 SQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR-PKMVILGSR 129
+ + +S +PTI Y SRTHSQL QV+ EL + Y+ K ILGSR
Sbjct: 81 FSTWQSSGAGGAEKTEEKLKNSFIPTIFYASRTHSQLEQVVHELNRTEYKWVKTTILGSR 140
Query: 130 EQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSR----VADYMKNNPHLGDEPID 184
E CI+++V ++ S Q++ CR L K R C+++++ D M GD +D
Sbjct: 141 EHFCINQKVKKIKESNRQSHVCRGLVSK---RACHYYNKFDAMTTDKMNEVLDKGD-AMD 196
Query: 185 IEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH 244
IED V +G CPYFM+R+ +T +++ PYNY+IDP R+ ++ KNSI+IFDEAH
Sbjct: 197 IEDFVKLGTQNSLCPYFMSRQRSETAELILLPYNYIIDPKMRRRYKLDLKNSIVIFDEAH 256
Query: 245 NLEGICADAASFDLSSGLLTACISEAKNC----IDISSTRRGQSSDET 288
NLE IC AS +LSS + CI E K +D T R ++ +T
Sbjct: 257 NLESICESNASAELSSTNIALCIEELKKVLALLVDEEETARAEADMDT 304
>gi|255731468|ref|XP_002550658.1| DNA repair helicase RAD3 [Candida tropicalis MYA-3404]
gi|240131667|gb|EER31226.1| DNA repair helicase RAD3 [Candida tropicalis MYA-3404]
Length = 781
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 204/761 (26%), Positives = 338/761 (44%), Gaps = 120/761 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K YR
Sbjct: 60 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEYRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLC--------KKG------ 157
+ + L SR+ LC+H +S R G + CR + +KG
Sbjct: 95 NELGEVEDFRGLGLTSRKNLCLHPTISKERKGVVVDEKCRRITNGQLKSKIEKGIVTEED 154
Query: 158 ------TNRRCNHHSRVADYMKNNPHLGDEP--IDIEDLVNIGRTFGPCPYFMTRELQKT 209
TN C++H ++ DY PH P + L+ + G CPYF R +
Sbjct: 155 QLLNPETNSLCSYHEKLYDY---EPHNLIPPGVYSFDALLRYCKDEGTCPYFTVRRMIPF 211
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
+I+ Y+YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL+ L
Sbjct: 212 CNIIIYSYHYLLDPKIAERVSKELSKDSIIIFDEAHNIDNVCIESLSLDLTEDTLKRATR 271
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAI--LR-ALLLKLEKRIAEVPINSKEL------G 319
A + + Q S++ N + LR A + + ++ P+ ++L G
Sbjct: 272 GANKLGEAIEEMKSQDSEKLQNEYEQLVEGLRQAEIARDQELFMANPVLPQDLLDEAIPG 331
Query: 320 FTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIES 373
+ G + L +T K++ ++ E LQ K +K C R+
Sbjct: 332 NIRKGEHFIAFLKRFVEYLKTRMKVLHVISETPTSFLQHLKDLTYIERKPLRFCSERLSL 391
Query: 374 ISNILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPG 424
+ L++ + A A + V D +L+ + L + C +
Sbjct: 392 LVRTLELSEVEDFNALKDIATFATLVSTYDTGFQLILEPYETEGSTVPNPILHFTCLDAS 451
Query: 425 IAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPV 481
IA++ F R S+I+TSGT+SP+D + + +NF ++ + +T + IV
Sbjct: 452 IAIKPVFERF--SSVIITSGTISPLDMYPK--MMNFQTVIQQSYSMTLARRSFLPMIVTK 507
Query: 482 GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH 541
G ++S + R+ + G+ +V A+I PDG+++FFPSY M+ I+ W+N
Sbjct: 508 GSDQVSISSRFEIRNDPSVVRNYGSLLVEFAKITPDGMVVFFPSYLYMESIISMWQNM-- 565
Query: 542 GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLD 601
G L +W KHK +VE + LA+E Y ++ GAV +V RGKVSEG+D
Sbjct: 566 GVLDEVW----KHKLILVETPDAQETSLALETYRKAC--SNGRGAVLLSVARGKVSEGID 619
Query: 602 FADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQA 661
F H GR V++ G+PF ++ + E++ + ++ LSF A
Sbjct: 620 FDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFSIKENDF----LSF---------DA 666
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
R Q +GRV+R + DYG ++ D RF+ +K+Q+ WI
Sbjct: 667 MRHAAQCLGRVLRGKDDYGIMVLADRRFSR--KKNQLPKWI 705
>gi|50293749|ref|XP_449286.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528599|emb|CAG62260.1| unnamed protein product [Candida glabrata]
Length = 775
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 194/754 (25%), Positives = 338/754 (44%), Gaps = 114/754 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYQYMRDIKRTLDAGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H EVS R G+ + CR + ++
Sbjct: 95 KELGFKEEFRGLGLTSRKNLCLHPEVSKERSGTIVDEKCRRMTNGQAKKKLEEDPEANVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C++H + N +L + E L+ CPYF+ R + +I+ Y+YL
Sbjct: 155 LCDYHENLYQLDVEN-YLPNGVFSFEKLIKYCEQKVLCPYFIVRRMISMCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ +L ++ N ++
Sbjct: 214 LDPKIAERVSHEVSKDSIVIFDEAHNIDNVCIESLSLDLTNDVLRKA-TKGANTLNERIA 272
Query: 280 RRGQSSDETLNPDNFAILRAL-----LLKLEKRIAEVPINSKEL------GFTKPGPYIY 328
Q L + +++ L + + E+ E P+ ++L G + +
Sbjct: 273 EARQVDARKLQDEYEKLVQGLHAEDIMTQTEEPFVETPVLPQDLLKEAIPGNIRRAEHFI 332
Query: 329 ELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI-- 380
L L +T K++ ++ E LQ K ++K C R+ + L+I
Sbjct: 333 SFLKRLIEYLKTRMKVLHVISETPRSFLQHLKQLTFIDRKPLRFCSERLSLLVRTLEIED 392
Query: 381 -----IFRDKGT------AHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE 429
+D T + + + + + A V + + + C + IA++
Sbjct: 393 VEEFAALKDIATFATLVSTYEDGFTLIIEPYEIENAAV----PNPIMRFTCLDASIAIKP 448
Query: 430 -FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLL 488
F R S+I+TSGT+SP+D + + L L+ + K IV G +
Sbjct: 449 VFERF--SSVIITSGTISPLDMYPRMLNFETVLQKSYSMSLAKKSFLPMIVTKGSDQVAI 506
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
+S + R+ + G+ +V A+I PDG+++FFPSY M+ ++ W+ + G L +W
Sbjct: 507 SSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQ--TMGILDEVW 564
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF GR
Sbjct: 565 ----KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHQYGR 618
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
V++ G+PF ++ + E++ Y+ + FLS + A R Q
Sbjct: 619 TVLMIGIPFQYTESRILKARLEFM-------RENYRIRENDFLSFD------AMRHAAQC 665
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+GRV+R + DYG +I D RF+ +++Q+ WI
Sbjct: 666 LGRVLRGKDDYGVMILADRRFSR--KRNQLPKWI 697
>gi|365760988|gb|EHN02666.1| Rad3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 775
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 193/753 (25%), Positives = 334/753 (44%), Gaps = 112/753 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYKYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRT 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H EVS R G+ + CR + R+
Sbjct: 95 KELGYQEDFRGLGLTSRKNLCLHPEVSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ +L E L+ CPYF+ R + +I+ Y+YL
Sbjct: 155 LCEYHENLYD-IEVEDYLPKGVFSFEKLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ L + N +D T
Sbjct: 214 LDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTTDALRRA-TRGANALDERIT 272
Query: 280 RRGQSSDETLNPDNFAILRAL-----LLKLEKRIAEVPINSKEL------GFTKPGPYIY 328
+ + L + +++ L L E+ E P+ +L G + +
Sbjct: 273 EVRKVDSQKLQDEYEKLVQGLHSADILTDQEEPFVETPVLPLDLLKEAIPGNIRRAEHFV 332
Query: 329 ELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKII- 381
L L +T K++ ++ E LQ K +K C R+ + L++
Sbjct: 333 SFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCSERLSLLVRTLEVAE 392
Query: 382 ------FRDKGT------AHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE 429
+D T + + + + + A V + + + C + IA++
Sbjct: 393 VEDFNALKDIATFATLISTYEEGFLLIIEPYEIENAAV----PNPIMRFTCLDASIAIKP 448
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
+ S+I+TSGT+SP+D + + L L+ + K I+ G ++
Sbjct: 449 VFE-KFSSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPMIITKGSDQVAIS 507
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
S + R+ + G+ +V A+I PDG+++FFPSY M+ ++ W+ + G L +W
Sbjct: 508 SRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQ--TMGILDEVW- 564
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF GR
Sbjct: 565 ---KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHQYGRT 619
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V++ G+PF ++ + E++ Y+ + FLS + A R Q +
Sbjct: 620 VLMIGIPFQYTESRILKARLEFM-------RENYRIRENDFLSFD------AMRHAAQCL 666
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
GRV+R + DYG ++ D RF+ ++SQ+ WI
Sbjct: 667 GRVLRGKDDYGVMVLADRRFSR--KRSQLPKWI 697
>gi|367008340|ref|XP_003678670.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
gi|359746327|emb|CCE89459.1| hypothetical protein TDEL_0A01270 [Torulaspora delbrueckii]
Length = 775
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 201/759 (26%), Positives = 340/759 (44%), Gaps = 124/759 (16%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYKYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QLHYPEHRKIIYCSRTMSEIEKALVELENLMDYRS 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
+ + L SR+ LC+H VS R G+ + CR + ++
Sbjct: 95 RELGVHEDFRGLGLTSRKNLCLHPIVSKERKGTVVDEKCRRMTNGQAKQKLETDPDSKVE 154
Query: 162 -CNHHS-----RVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFA 215
C +H V DY+ + E L+ CPYF+ R + +I+
Sbjct: 155 LCEYHENLYNIEVEDYLPKGVY------SFERLIKYCEERKLCPYFIVRRMISLCNIIIY 208
Query: 216 PYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI 274
Y+YL+DP + + E K+ I+IFDEAHN++ +C ++ S DL++ +L ++ N +
Sbjct: 209 SYHYLLDPKIAERVSREMSKDGIVIFDEAHNIDNVCIESLSLDLTNDVLKRA-TKGANAL 267
Query: 275 D--ISSTRRGQSSDETLNPDNF--AILRALLLKLEKRIA-EVPINSKEL------GFTKP 323
+ I RR + D + A +L+ E+ A E P+ S++L G +
Sbjct: 268 ENRIEEVRRVDAQKLQDEYDKLVQGLHTAEILEPEEESALETPVLSQDLLTEAIPGNIRR 327
Query: 324 GPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--------RI 371
+ L L +T K++ ++ E LQ K ++K C R
Sbjct: 328 AEHFVSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRFCSERLSLLVRT 387
Query: 372 ESISNI-----LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPG 424
+S I LK I F + + + + + + A V + + + C +
Sbjct: 388 LEVSEIEDFMALKDIATFATLISTYETGFLLIIEPYEIENAAV----PNPIMRFTCLDAS 443
Query: 425 IAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGP 483
IA++ F R S+I+TSGT+SP+D + + L N L+ + K IV G
Sbjct: 444 IAIKPVFERF--SSVIITSGTISPLDMYPRMLNFNTVLQKSYAMTLAKKSFLPMIVTKGS 501
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
++S + R+ + G+ +V ++I PDG+++FFPSY M+ I+ W+ + G
Sbjct: 502 DQVAISSRFEIRNDPSIVRNYGSMLVEFSKITPDGMVVFFPSYLYMESIISMWQ--TMGI 559
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
L +W KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF
Sbjct: 560 LDEVW----KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFD 613
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
H GR V++ G+PF ++ + E+L Q + ++ LSF A R
Sbjct: 614 HHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF---------DAMR 660
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RF+ +++Q+ WI
Sbjct: 661 HAAQCLGRVLRGKDDYGVMVLADRRFSR--KRNQLPKWI 697
>gi|68471265|ref|XP_720409.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|77022390|ref|XP_888639.1| hypothetical protein CaO19_7119 [Candida albicans SC5314]
gi|46442275|gb|EAL01566.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|76573452|dbj|BAE44536.1| hypothetical protein [Candida albicans]
Length = 765
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 201/750 (26%), Positives = 334/750 (44%), Gaps = 107/750 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYSYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K +R
Sbjct: 60 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLC--------KKGT---NR 160
+ + L SR+ LC+H +S R G + CR + +KG +
Sbjct: 95 NELGEVEDFRGLGLTSRKNLCLHPTISKERKGVVVDEKCRRITNGQLKEKIEKGVPTEDS 154
Query: 161 RCNHHSRVADYMKNNPHLGDEP--IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYN 218
C+ H ++ D PH P + L+ + G CPYF R + +I+ Y+
Sbjct: 155 LCSFHEKLYDL---EPHNLVPPGVYSFDALIKYCKEEGTCPYFTVRRMIPFCNIIIYSYH 211
Query: 219 YLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDIS 277
YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL+ L A +
Sbjct: 212 YLLDPKIAERVSRELSKDSIVIFDEAHNIDNVCIESLSLDLTDETLKKASRGANKLGEAI 271
Query: 278 STRRGQSSDETLNPDNFAI--LR-ALLLKLEKRIAEVPINSKEL------GFTKPGPYIY 328
+ Q S++ N + LR A + + ++ P+ ++L G + G +
Sbjct: 272 EDMKAQDSEKLQNEYEQLVEGLRQAEIARDQELFMANPVLPQDLLDEAIPGNIRKGEHFI 331
Query: 329 ELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKIIF 382
L +T K++ ++ E LQ K +K C R+ + L++
Sbjct: 332 AFLKRFIEYLKTRMKVLHVISETPTSFLQHLKELTYIERKPLRFCSERLSLLVRTLEVTE 391
Query: 383 RDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIAMQE-FSR 432
D A A + V D+ +L+ + L + C + IA++ F R
Sbjct: 392 IDDFNALKDIATFATLVSTYDSGFQLILEPYETEGSTVPNPILHFTCLDASIAIKPVFDR 451
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
S+I+TSGT+SP+D + + LK ++ + + IV G ++S +
Sbjct: 452 F--SSVIITSGTISPLDMYPKMLKFETVIQESYAMTLARRSFLPMIVTKGSDQVSISSRF 509
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R+ + G+ ++ A+I PDG+++FFPSY M+ I+ W+ S G L +W
Sbjct: 510 EIRNDPSVVRNYGSLLIEFAKITPDGMVVFFPSYLYMESIISMWQ--SMGVLDEVW---- 563
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
KHK +VE + LA+E Y ++ GAV +V RGKVSEG+DF H GR V++
Sbjct: 564 KHKLILVETPDAQETSLALETYRKAC--SNGRGAVLLSVARGKVSEGIDFDHHYGRTVLM 621
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
G+PF ++ + E++ Q + ++ LSF A R Q +GRV
Sbjct: 622 IGIPFQYTESRILKARLEFMRDHFQIKENDF----LSF---------DAMRHAAQCLGRV 668
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+R + DYG ++ D RFA +K+Q+ WI
Sbjct: 669 LRGKDDYGIMVLADRRFAR--KKNQLPKWI 696
>gi|254569252|ref|XP_002491736.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|238031533|emb|CAY69456.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|328351762|emb|CCA38161.1| DNA excision repair protein ERCC-2 [Komagataella pastoris CBS 7435]
Length = 773
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 198/750 (26%), Positives = 339/750 (45%), Gaps = 108/750 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N +LE P+GTGKT+ LL T+++
Sbjct: 3 FLIDDLPVIFPYPKIYPEQYAYMCDIKRTLDIGGNCILEMPSGTGKTISLLSLTVSY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K ++R
Sbjct: 60 -------------------------QMFYPEHRKIIYCSRTMSEIEKALIELTKLMDFRT 94
Query: 122 KMVI---------LGSREQLCIHREVSLLRGSAQNNACRFLCK--------KG---TNRR 161
K + L SR+ LC+H +G + CR + KG ++
Sbjct: 95 KELGVKENFRGLGLTSRKNLCLHPISQERKGIVVDEKCRRMTNGQLSLQVAKGEADKDQL 154
Query: 162 CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
C+ H ++ D + ++ ++ E+L+ + G CPYF R + +I+ Y+YL+
Sbjct: 155 CSFHEKMND-LDSHEYIPIGVYSFEELIKYCKGVGICPYFTVRRMMSFCNIIIYSYHYLL 213
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC------ISEAKNCI 274
DP + + E K SI+IFDEAHN++ +C ++ S DL++ L +S+ + I
Sbjct: 214 DPKIAQRVSKELSKESIVIFDEAHNIDNVCIESLSLDLTNDTLKKASRGVNSLSKKVDEI 273
Query: 275 DISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL------GFTKPGPYIY 328
+++ Q E L A + + E+ I PI ++ G + G +
Sbjct: 274 KRIDSKKLQDEYERLVEGLRATESS---RNEELIMANPILPDDILTESIPGNIRRGEHFV 330
Query: 329 ELLADLNITQETAYKLIDIV-EVAAELLQEDKLQN---KKSTTAC--RIESISNILKIIF 382
L +T K++ ++ E A LQ KL +K C R+ + L++
Sbjct: 331 MFLKRFIEYLKTRMKVLHVISETPASFLQHLKLLTFIERKPLRFCAERLALLVKTLELTE 390
Query: 383 RDKGTAHS--AYYRVHVREADANAADVLKGKASRTLS-------WWCFNPGIAMQE-FSR 432
++ A A + V + +L+ + S + C + IA++ F R
Sbjct: 391 IEEFIALKDIATFATLVSTYETGFQLILEPYETENASGPNPILHFTCLDASIAIKPIFDR 450
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY 492
S+I+TSGT+SP+D + + LK + ++ ++ + IV G ++S +
Sbjct: 451 F--SSVIITSGTISPLDMYPKMLKFDTVIQESYTMTLSRRSFLPLIVTKGSDQVSISSRF 508
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R+ + G ++ ++I PDGL++FFPSY M+ I+ W+N G L +W
Sbjct: 509 EIRNDPSVVRNYGTLLIEFSKITPDGLVVFFPSYLYMESIISMWQNM--GILDEVW---- 562
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K+K +VE S L +E Y ++ GAV +V RGKVSEG+DF H GR V++
Sbjct: 563 KYKLILVETPDSQETSLGLETYRKAC--SNGRGAVLLSVARGKVSEGIDFDHHFGRTVLM 620
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
G+PF ++ + EYL Q + E+ LSF A R Q +GRV
Sbjct: 621 IGIPFQYTESRILKARLEYLRDHHQIKENEF----LSF---------DAMRHAAQCLGRV 667
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+R + DYG ++ D RF+ +++Q+ WI
Sbjct: 668 LRGKDDYGIMVLADRRFSR--KRNQLPKWI 695
>gi|195432086|ref|XP_002064057.1| GK19963 [Drosophila willistoni]
gi|194160142|gb|EDW75043.1| GK19963 [Drosophila willistoni]
Length = 848
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 186/683 (27%), Positives = 300/683 (43%), Gaps = 83/683 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I Y SRTHSQL Q++ EL+ +++ + + LGSR+QLCI+ V L S N C +
Sbjct: 194 IFYCSRTHSQLSQIVSELRKTSHSQWVRSISLGSRQQLCINPHVKRLSSVSLMNERCLDM 253
Query: 154 CKKGTNRRCNHHSRVADYMKNN---------PHLGD----EPIDIEDLVNIGRTFGPCPY 200
K T + SR+ HL D EP+DIEDLVN G+T CPY
Sbjct: 254 AKSKTKANPSKKSRLEISSSGGCAFKVPTQVDHLRDLALSEPVDIEDLVNQGQTARACPY 313
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSS 260
+ +R Q+ ++ PY L+ R+ LG+E SI+I DEAHNL A +++
Sbjct: 314 YASRLAQQKAQLILLPYQLLLQKSARQQLGIEISGSIVIIDEAHNLLDTLAQLHGSEINC 373
Query: 261 GLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGF 320
L N D+ TR G + +N F I+++LL L+ + P +
Sbjct: 374 NQLNMAKDLILNYKDVYKTRLGPKNLLKINQLVF-IIKSLLKLLDNKTTAKPRLLRTYEL 432
Query: 321 TKPGPY----IYELLADLNITQETAYKLIDI---------------VEVAAELLQEDKLQ 361
T G + + +LL D + A K+ + +E+ L ++ + Q
Sbjct: 433 TAEGDFFNINLIDLL-DFCVRSRFAQKVQNCPKREPKQVENRPPPSIELLKRLAKQHEGQ 491
Query: 362 NKK-------------STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVL 408
+K+ S+TA +++ ++ R + +DA VL
Sbjct: 492 SKRKLQHDEPAPQPPPSSTASTVDAKRLLMPSPIR------PILAFLETLTSDAADGRVL 545
Query: 409 KGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLRVEN- 465
T + NP + FS + + +I++ GT+ P + ++L N RV
Sbjct: 546 IQPEQGTFKYLLLNPA---EHFSDIVNQARAIVIAGGTMKPTEELIEQLFANCTERVVER 602
Query: 466 --PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
HV+ + + GP+G L +Y R S + EL + N+ +++P GL+ F
Sbjct: 603 FYDHVVPPDAVLPFAITKGPTGTNLCFNYTQRGSSKMLTELSMILQNLCQVLPHGLVCFL 662
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST 583
PSY +DQ H RI K K+ E ++ Y +
Sbjct: 663 PSYDYLDQVY------KHLEQCGALARIAKRKRIFRESSGGGSVEQLLQLYAEAISSEDN 716
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ +V GK+SEGL+FAD+ GR V++ G+P+ T P+++ + +LD
Sbjct: 717 GGALLLSVVGGKLSEGLNFADNLGRGVIVVGLPYPNRTSPELQERMRHLD---------- 766
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
KL +G ++Y +AVNQ +GR +RH DY + DER+A + ++ WI
Sbjct: 767 --EKLGPGAGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLLDERYAAERIQQKLPRWIA 824
Query: 704 PH-IQCYSKFGDVVYTLTRFFRE 725
H + +FG V +FF+E
Sbjct: 825 RHMVTANQRFGQVQAGTVKFFKE 847
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ 72
FP+E Y+ Q M++V Q L++K + ESPTGTGK+L L CA L W + + S+
Sbjct: 20 FPYEPYEIQGQLMQQVFQVLESKQIGIFESPTGTGKSLTLTCAALTWLQHHEEL--VRSE 77
Query: 73 VNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSN 118
+ +I+ +S + + ++ + +LR +Q+LK N
Sbjct: 78 LRERIARLESEIAKLRELGGQVTDWISEQAKVQELRAELQQLKRLN 123
>gi|116179420|ref|XP_001219559.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
gi|88184635|gb|EAQ92103.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 201/815 (24%), Positives = 340/815 (41%), Gaps = 151/815 (18%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAWRKSL--- 63
ID P+ YD QL +M V L+ N +LESPTGTGK+L L+CATL W ++
Sbjct: 7 IDFHHPYTPYDVQLNFMRTVYDVLERGNGQVGILESPTGTGKSLSLICATLTWLRAHKRA 66
Query: 64 ---GSFSTLGSQVNNQ------ISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL 114
SF + + ++ + + + + + L Q I EL
Sbjct: 67 RYEASFDATAAGMRDEPEWMVQARAAAQARGTGAAVGGAREGDGEGEGEGTGLTQFISEL 126
Query: 115 KTSNYRP----------------------KMVILGSREQLCIHREVSLLRG-SAQNNACR 151
+ + P K + L SR++LCI+ V L SA N+ C
Sbjct: 127 RRPAFPPSIPTEMLSSNEKDEEQPTTETVKQLPLSSRQKLCINPSVVRLGSLSAINDRCT 186
Query: 152 FLCKKGTNRRCNHHSRVADYMK----NNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQ 207
L + T +C+ + + + L P DIEDL IG+ CPY+ +R
Sbjct: 187 ELQQSKTKDKCSFMPNTENLKQAHDFRDAALATVP-DIEDLHRIGKELQVCPYYASRTAI 245
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
+++ PY L+ R LG++ + +++I DEAHN+ A+ + ++ C+
Sbjct: 246 PGAEVITLPYPLLLQKNARDALGIKLEGNVVIIDEAHNVMDAVANVYAAEI-------CL 298
Query: 268 SE---AKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP------INSK-E 317
SE A+ + I R G+ L +N R ++ ++ K + + +N K +
Sbjct: 299 SELRRARQMLSIYVKRFGKK----LKGEN----RVMIAQVGKVVESLSACLNEQLNIKGD 350
Query: 318 LGFTKPGPYIYELLAD-LNITQ--------ETAYKLIDIVEVAAELLQEDK---LQNKKS 365
G P + AD +N+ Q + AYK+ V A QE+ K S
Sbjct: 351 QGIVDPNTVLKARGADQINLYQLIKYIQDSKLAYKIESYVSHAEN--QEESSSSAHGKPS 408
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
+ + ++ + L + T S+ R+ + D+ LS+ +P
Sbjct: 409 PSTPVLHTLVSFLTAL-----TNLSSEGRIFSEKLATTPPDI-------KLSYLLLSPTN 456
Query: 426 AMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL----RVENPHVITSKQIWAGIVPV 481
A + ++IL GT+SP + + L +FP + HVI S ++ +
Sbjct: 457 AFSSIAS-SARAVILAGGTMSPFEDYKAHLFPSFPTDKITTLSCGHVIPSSNLFGWTLA- 514
Query: 482 GPSGYLLNSSYRNRDSIEYK----------QELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
S N DS E+ ++LG ++NI +VPDG+++FFPS+ +D+
Sbjct: 515 --STTPTTPGTTNADSFEFSFQKRREPGMIRQLGLALLNICSVVPDGVVVFFPSHGYLDE 572
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY----------------- 574
+A W+ +W+R+ KK V + + ++ Y
Sbjct: 573 VVAAWQTQETPTQPPLWDRLAG-KKAVFRETKGGVSEDVLQQYSDAILFPAAAAAPPSLG 631
Query: 575 ---MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY 631
A K GA+ +V GK+SEG++F+D GR VV+ G+P+A + P + + EY
Sbjct: 632 GSQQAATKPRRPGGALLLSVVGGKLSEGINFSDRLGRCVVVVGLPYANINSPDWKARLEY 691
Query: 632 LDLQAQSQ-------------------GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
++ + GE + L+ + D+Y RAVNQ++GR
Sbjct: 692 IEATEMERLMEGEGKGKGEGGVGGAPPRGEAEARALAKQAARDFYENACMRAVNQSIGRA 751
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
IRHR DY A++ D RFA K ++ WI+ ++
Sbjct: 752 IRHRADYAAVVLVDRRFATERIKGKLPGWIRAGME 786
>gi|241957053|ref|XP_002421246.1| 5' to 3' DNA helicase, putative; DNA repair helicase Rad3
homologue, putative; transcription initiation factor
TFIIH subunit, putative [Candida dubliniensis CD36]
gi|223644590|emb|CAX40578.1| 5' to 3' DNA helicase, putative [Candida dubliniensis CD36]
Length = 781
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 201/759 (26%), Positives = 336/759 (44%), Gaps = 116/759 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K +R
Sbjct: 60 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLC--------KKG------ 157
+ + L SR+ LC+H +S R G + CR + +KG
Sbjct: 95 NELGEVEDFRGLGLTSRKNLCLHPTISKERKGVVVDEKCRRITNGQLKEKIEKGVITEED 154
Query: 158 ------TNRRCNHHSRVADYMKNNPH--LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKT 209
TN C++H ++ D PH + + L+ + G CPYF R +
Sbjct: 155 QVRDPETNSLCSYHEKLYDL---EPHNLVPSGVYSFDALLKYCKEEGTCPYFTVRRMIPF 211
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
+I+ Y+YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL+ L
Sbjct: 212 CNIIIYSYHYLLDPKIAERVSRELSKDSIVIFDEAHNIDNVCIESLSLDLTDETLKKASR 271
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAI--LR-ALLLKLEKRIAEVPINSKEL------G 319
A + + Q S++ N + LR A + + ++ P+ ++L G
Sbjct: 272 GANKLGEAIEDMKTQDSEKLQNEYEQLVEGLRQAEIARDQELFMANPVLPQDLLDEAIPG 331
Query: 320 FTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIES 373
+ G + L +T K++ ++ E LQ K +K C R+
Sbjct: 332 NIRKGEHFIAFLKRFIEYLKTRMKVLHVISETPTSFLQHLKELTYIERKPLRFCSERLSL 391
Query: 374 ISNILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPG 424
+ L++ + A A + V D+ +L+ + L + C +
Sbjct: 392 LVRTLELTEIEDFNALKDIATFATLVSTYDSGFQLILEPYETEGSTVPNPILHFTCLDAS 451
Query: 425 IAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGP 483
IA++ F R S+I+TSGT+SP+D + + LK ++ + + IV G
Sbjct: 452 IAIKPVFDRF--SSVIITSGTISPLDMYPKMLKFETVIQESYAMTLARRSFLPMIVTKGS 509
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
++S + R+ + G+ ++ A+I PDG+++FFPSY M+ I+ W+N G
Sbjct: 510 DQVSISSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVFFPSYLYMESIISMWQNM--GV 567
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
L +W KHK +VE + LA+E Y ++ GAV +V RGKVSEG+DF
Sbjct: 568 LDEVW----KHKLILVETPDAQETSLALETYRKAC--SNGRGAVLLSVARGKVSEGIDFD 621
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
H GR V++ G+PF ++ + E++ Q + ++ LSF A R
Sbjct: 622 HHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKENDF----LSF---------DAMR 668
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RFA +K+Q+ WI
Sbjct: 669 HAAQCLGRVLRGKDDYGIMVLADRRFAR--KKNQLPKWI 705
>gi|255718745|ref|XP_002555653.1| KLTH0G14300p [Lachancea thermotolerans]
gi|238937037|emb|CAR25216.1| KLTH0G14300p [Lachancea thermotolerans CBS 6340]
Length = 782
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 195/749 (26%), Positives = 339/749 (45%), Gaps = 105/749 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL +A+
Sbjct: 3 FYIDDLPVIFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLAVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q+ ++ I+Y SRT S++ + + EL++ +YR
Sbjct: 60 -------------------------QTHYAEHRKIIYCSRTMSEIEKALVELESLMDYRS 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNH----HSR 167
K + L SR+ LC+H V R G+ + CR + R+ +
Sbjct: 95 KELGHKEHFRGLGLTSRKNLCLHPRVRKERKGTVVDEKCRRMTNGQAARKAEQDPTANIE 154
Query: 168 VADYMKNNPHLGDE---PIDI---EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
+ D+ +N + E P+ + E L+ CPYF R + DI+ Y+YL+
Sbjct: 155 LCDFHENLNTMDPENYVPVGVYSFEKLIKYCEERTMCPYFTVRRMIAMCDIMIYSYHYLL 214
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID-ISST 279
DP + + E +++I+IFDEAHN++ +C ++ S DL++ +L A N + I
Sbjct: 215 DPKISERVSKEVSRDAIVIFDEAHNIDNVCIESLSLDLTNDVLKRATKGANNLNEKIQEV 274
Query: 280 RRGQSSDETLNPDNFAILRAL----LLKLEKRIAEVPINSKEL------GFTKPGPYIYE 329
R Q + L + ++ L +L E+ E P+ S++L G + +
Sbjct: 275 R--QVDSQRLQDEYEKLVNGLRAPDMLGAEEPPVESPVLSQDLLSEAIPGNIRRAEHFVS 332
Query: 330 LLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKIIFR 383
L +T K++ ++ E LQ K +K C R+ + L++
Sbjct: 333 FLKRFIEYLKTRMKVLHVISETPNSFLQHLKQLTFIERKPLRFCSERLSLLVRTLEVSEI 392
Query: 384 DKGTAHS--AYYRVHVREADANAADVLK-------GKASRTLSWWCFNPGIAMQE-FSRL 433
++ TA A + + + +++ + + + C + IA++ F +
Sbjct: 393 EEFTALKDIATFATLISTYEEGFVLIIEPYEIENAAVPNPIMRFTCLDASIAIKPVFDKF 452
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
S+I+TSGT+SP+D + + L L+ + K IV G ++S +
Sbjct: 453 --SSVIITSGTISPLDMYPKMLNFETVLQESYAMTLAKKSFLPMIVTKGSDQVAISSRFE 510
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G+ +V A+I PDG+++FFPSY M+ I+ W+ + G L +W K
Sbjct: 511 IRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIISMWQ--TMGILDEVW----K 564
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +VE + LA+E Y ++ GA+ +V RGKVSEG+DF H GR V++
Sbjct: 565 YKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHHFGRTVLMI 622
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+PF ++ + E+L Q + ++ LSF A R Q +GRV+
Sbjct: 623 GIPFQYTESRILKARLEFLREHYQIRENDF----LSF---------DAMRHAAQCLGRVL 669
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWI 702
R + DYG ++ D RFA +K Q+ WI
Sbjct: 670 RGKDDYGVMVLADRRFAR--KKGQLPKWI 696
>gi|409078986|gb|EKM79348.1| hypothetical protein AGABI1DRAFT_58886 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 867
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 181/684 (26%), Positives = 302/684 (44%), Gaps = 73/684 (10%)
Query: 97 ILYTSRTHSQLRQVIQELK-----------------------------TSNYRPKMVILG 127
I Y SRTHSQL QV+ EL+ + ++V LG
Sbjct: 204 IYYASRTHSQLSQVLPELRRIKLSQAVAVIDLHPSSVPQKRGADVLHDVDSTTTRVVALG 263
Query: 128 SREQLCIHREVSLLRGSAQN--NACRFLCKKGTNRRC------NHHSRVADYMKNNPHLG 179
SR+QLCI+ E LR A++ ACR L + ++RC ++ D+ +
Sbjct: 264 SRKQLCINDE---LRSKARDLDEACRELLSEKGDQRCPYLPPPGEDIKIIDF---RDQIL 317
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
P DIEDL +GR CPYF +R ++V PYN L+ R+ LG++ ++ I++
Sbjct: 318 AAPKDIEDLAEVGRMADTCPYFGSRHAIPQAELVTLPYNLLLQKSAREALGIDLRDQIVV 377
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
DEAHNL ++ L +L + + C +S R S+ ++ +
Sbjct: 378 IDEAHNLIPTLLSLSTTHLPYHILDVSLRQV--CAYLSKFRMRLSARNLVHLKRLVVFLD 435
Query: 300 LLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKL--IDIVEVAAELLQE 357
L K + E N +L T E+L + + K I+++E+ + L+E
Sbjct: 436 ALKKTLIQWKEKQCN--DLSSTSRSAERLEVLTLAELLDQMGRKAAGINLLEIG-QYLKE 492
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAY----YRVHVREADANAADVL----- 408
K+ K S A + + KG + + V + + + L
Sbjct: 493 SKIARKISGYADKETDKETDPTSRQKKKGQIPPLHVVEDFMVSLTNTNDDGRVTLALFGK 552
Query: 409 KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN--- 465
+G+ + + NP + E SIIL GT+SPM +L + R+
Sbjct: 553 QGQEQVEIKYQLLNPAPNFMDVVD-EARSIILAGGTMSPMSDVVSQLFSHALERIRTFSC 611
Query: 466 PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
HVI K + A +V P G L + ELG ++N A ++P G+++FFPS
Sbjct: 612 GHVIPEKNLQALVVTKSPRGGSLEYKADKQGDPNVVAELGQILLNFANVIPAGVVVFFPS 671
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD--TST 583
Y + WK + G L +R ++ EP S+ + +Y A +
Sbjct: 672 YNFLKFAKNVWK--AGGTL----DRFSAKREVFFEPDGSTDVERVLGEYAAAATTPPVNK 725
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ FAV K+SEGL+F+D RAV++ G+PFA + P+++ + +Y+ + +G
Sbjct: 726 KGAILFAVIGAKLSEGLNFSDDLARAVIVIGLPFANLGSPELKERLKYVKQLEERRGS-- 783
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
K K + + Y +VNQ++GR IRH+ D+ ++I D+R+A + + ++ WI
Sbjct: 784 KREKGQKDAAAELYENMCMNSVNQSIGRAIRHKGDWASLILLDQRYASSAIRMKLPQWIG 843
Query: 704 PHIQCYSKFGDVVYTLTRFFREER 727
+ FG V+ L +F+ E+R
Sbjct: 844 GRLFIPDGFGQVMRQLGQFYNEKR 867
>gi|134107760|ref|XP_777491.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260183|gb|EAL22844.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 883
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 194/706 (27%), Positives = 315/706 (44%), Gaps = 108/706 (15%)
Query: 95 PTILYTSRTHSQLRQVIQEL-KTS----------------NYRPKMVILGSREQLCIHRE 137
P + YTSRTH+QLRQ+ EL KTS ++ +V LGSR+QLCI+ +
Sbjct: 218 PKVYYTSRTHTQLRQLTSELLKTSFASYDSVPESSSAEAPSHGVSLVPLGSRKQLCINEK 277
Query: 138 V-SLLRGSAQ---NNACRFLCKKGTNRRCNHHSRVAD---YMKNNPHLGDEPIDIEDLVN 190
V +L R N AC + K G RC AD + + DIED+V
Sbjct: 278 VRALARNGGDERMNEACLDMQKSG-KARCEFLPAKADEITMLDARDTILASVKDIEDIVT 336
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ TR+ K IV PYN L+ R+ LG++ KN +++ DEAHNL
Sbjct: 337 MGKKSCVCPYYATRKAVKQSQIVTLPYNLLLQKNSREALGIKLKNQVVVIDEAHNLIDTL 396
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDN-------FAILRALLLK 303
L+S L +S+ + + +R L P + ++L+ L+
Sbjct: 397 LSIHCTTLTSTNLANAVSQLQQYLQRFKSR--------LKPIHSLWIQQILSLLQGLIRV 448
Query: 304 LEKRIAEVPINSKELGFTKP-GPYIYELLADLNITQETA--YKLIDIVEVAAELLQEDKL 360
+K + +KE +KP G E+L N+ ++ +E+ A L+E +L
Sbjct: 449 CDKFFQDAKSQTKE---SKPVGKPKVEVLDVNNLMGRIGGGSDQVNPIELLA-YLKESRL 504
Query: 361 QNKKSTTACRIESISNILKIIFRDKGTAHSAYYR------VHVREA------DA------ 402
K S + + + +D T+ SA R H E+ DA
Sbjct: 505 ARKISGFSEHVAE-----QAALKDAKTSRSATARHASIAAFHNVESFLLSLVDAKDDGRI 559
Query: 403 --NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
+ D+ K + + + NP +E E S+IL GT+ P+ F Q+L + P
Sbjct: 560 ILSIDDLDKSEPVVVIKYVLLNPSERFKEVVE-EARSVILAGGTMEPITDFLQQLFPSIP 618
Query: 461 L----RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
+ HVI + +V VGP + NR+ +LG + +VP
Sbjct: 619 KDRLSTLSCSHVIPKVNLLTQVVSVGPRKSEFEFKFGNRNDEALLTDLGAVLQATIGVVP 678
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
DG+++F PSY +D+ A W + + +R+ + K+ EP+ S + DY
Sbjct: 679 DGVVVFLPSYAFLDKVRAFWTKSG------LLQRLGERKQLFYEPQTSGDVETILRDYAL 732
Query: 577 KLKD---TSTSG-------AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
+ TSTSG A+ FAV G++F+D+ GR V++ G+PFA ++ +++
Sbjct: 733 AISSCYATSTSGQKSRKTGALMFAVV-----GGINFSDNLGRCVIMVGLPFANVSSVELQ 787
Query: 627 LKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCD 686
+ Y++ + G +E Y RAVNQ++GR IRH +DY I+ D
Sbjct: 788 ERMRYVETVPGAGQGASRE----------MYENLCMRAVNQSIGRAIRHANDYATILLVD 837
Query: 687 ERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGST 732
+R+A ++++ WI ++ FG V + FF+E++ G T
Sbjct: 838 KRYATSRIRNKLPKWIGKDVKVPQDFGGVARGVAAFFKEKKDRGLT 883
>gi|300120242|emb|CBK19796.2| unnamed protein product [Blastocystis hominis]
Length = 759
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 177/630 (28%), Positives = 291/630 (46%), Gaps = 79/630 (12%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRGSAQ-NNACR 151
P I Y SRTHSQL QV QE S + + +G R CIH V L AQ ++ C
Sbjct: 159 PQIYYCSRTHSQLSQVFQEFLHSAWAEDVQCSCIGGRRSFCIHPTVKRLPTDAQMSDECL 218
Query: 152 FLCKKGTNRR--CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKT 209
FL + + + C H+R + + L ++IEDLV CPY+ +R+
Sbjct: 219 FLQRNRSRGKEGCLFHNREREESIRDEVLTTN-LEIEDLVQYAEKEKGCPYYASRKAIPY 277
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
+ +V PYN +++ R+ LG++ KN ++IFDEAHNL D S ++ +L++ S+
Sbjct: 278 LKLVLLPYNLILNKKSREALGIDLKNQVVIFDEAHNLINAIGDLFSPTVTLSMLSSSHSQ 337
Query: 270 AKNCIDISSTRRGQSSDETLNPDNFAI-LRALLLKLEKRIAEVPINSKELGFTKPGPYIY 328
S R S +F I L+ +L L + P N + +I
Sbjct: 338 IDAYYQRYSDRLSSESH------SFIIHLQTILKALSHLLTTKPSNFGMVNIFTVNRFIQ 391
Query: 329 EL-LADLNITQETAYKLIDIVE--VAAELLQE-----DKLQNKKSTTACRIESISNILKI 380
L L +N L DI+ + ++Q+ D L ++++ +
Sbjct: 392 HLHLESIN--------LFDILHFITSKRIVQKLNGFVDTLGEDGKPPVSHFPAVTDFILA 443
Query: 381 IFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIIL 440
+ D A RV V + N L + NP + +E E S+I+
Sbjct: 444 LTNDNEDA-----RVVVSYSKDNGP---------FLRFLLLNPSVYFKEIVD-ECRSVII 488
Query: 441 TSGTLSPMDSFAQELKLNFP-------LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
T GTL P F+ +L FP + + PH+++ + A V + + +
Sbjct: 489 TGGTLQPFSEFSSQL---FPHLSQDRIVSLSLPHILSPDHVGAFYVTHTATRQEMRFDFS 545
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
NR++ +L + + + R VP GL++FFPS+ ++ + +T G +++ E
Sbjct: 546 NRENPSLLSDLASKLGILCRTVPRGLVVFFPSFSMLQTTLRFLHST--GKFSSLNEL--- 600
Query: 554 HKKPVV-EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
KP+ E R+ +F Y + LKD + GA+ FAV GK+SEG++F+D GR V I
Sbjct: 601 --KPIFSEEREKDVFAA----YSSYLKDHPSKGALLFAVIGGKLSEGINFSDDLGRCVAI 654
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
GMP+ TD ++ + +YLD Q + G G+D+Y+ +AVNQA+GR
Sbjct: 655 VGMPYPNKTDVVLQERMKYLD---QQKAG----------LGQDYYSNLCIKAVNQAIGRA 701
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
RH+ D+ +++F D R+ S +S+++ WI
Sbjct: 702 FRHKEDWASVVFLDYRYCQQSIRSRLTRWI 731
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTL 69
M + L ++ESPTGTGKTL LLC +L W L S STL
Sbjct: 1 MNTLFDILMKGNIGIIESPTGTGKTLSLLCGSLTW---LNSVSTL 42
>gi|366990349|ref|XP_003674942.1| hypothetical protein NCAS_0B04860 [Naumovozyma castellii CBS 4309]
gi|342300806|emb|CCC68570.1| hypothetical protein NCAS_0B04860 [Naumovozyma castellii CBS 4309]
Length = 774
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 197/755 (26%), Positives = 338/755 (44%), Gaps = 116/755 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYHYMCDLKKTLDAGGNSILEMPSGTGKTVSLLSLTIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
+ + L SR+ LC+H VS R G+ + CR + R+
Sbjct: 95 RELGHRENFRGLGLTSRKNLCLHPVVSKERKGTVVDEKCRRMTNGVAKRKLEQDPNADAE 154
Query: 162 -CNHHS-----RVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFA 215
C +H V DY+ N E L+ CPYF+ R + +I+
Sbjct: 155 LCEYHENLYKMEVGDYLPNGV------FSFEKLIKYCEERTICPYFVVRRMISMCNIMIY 208
Query: 216 PYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI 274
Y+YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ +L ++ N +
Sbjct: 209 SYHYLLDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTNDVLRRA-TKGANAL 267
Query: 275 D--ISSTRRGQSSDETLNPDNF--AILRALLLKL-EKRIAEVPINSKEL------GFTKP 323
+ I R+ + D + A +L + E+ E P+ SK+L G +
Sbjct: 268 EERIDDVRKVDAQKLQDEYDKLVEGLHTADILPVQEEPFVETPVLSKDLLKEAIPGNIRR 327
Query: 324 GPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNI 377
+ L L +T K++ ++ E LQ K ++K C R+ +
Sbjct: 328 AEHFVSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRFCSERLSLLVRT 387
Query: 378 LKIIFRDKGTAHS--AYYRVHVREADANAADVLK-------GKASRTLSWWCFNPGIAMQ 428
L++ + TA A + + + +++ + + + C + IA++
Sbjct: 388 LEVTEVEDFTALKDIATFATLISTYEDGFLLIIEPYEIENAAVPNPIMRFTCLDASIAIK 447
Query: 429 E-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYL 487
F R S+I+TSGT+SP+D + + L L+ + K IV G
Sbjct: 448 PVFERF--SSVIITSGTISPLDMYPRMLNFETVLQKSYAMTLAKKSFLPMIVTKGSDQVA 505
Query: 488 LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTI 547
++S + R+ + G+ +V A+I PDG+++FFPSY M+ ++ W+ + G L +
Sbjct: 506 ISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQ--TMGILDEV 563
Query: 548 WERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
W KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF G
Sbjct: 564 W----KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHQYG 617
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
R V++ G+PF ++ + E+L Q + ++ LSF A R Q
Sbjct: 618 RTVLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF---------DAMRHAAQ 664
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+GRV+R + DYG ++ D RF+ +++Q+ WI
Sbjct: 665 CLGRVLRGKDDYGVMVLADRRFSR--KRTQLPKWI 697
>gi|195025610|ref|XP_001986090.1| GH20727 [Drosophila grimshawi]
gi|193902090|gb|EDW00957.1| GH20727 [Drosophila grimshawi]
Length = 769
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 201/753 (26%), Positives = 341/753 (45%), Gaps = 108/753 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL--------KT 116
I + ++ ++Y SRT ++ +VI EL K
Sbjct: 60 -----------MIEHPE-----------RIRKLIYCSRTVPEIEKVIAELQNLMVYYDKH 97
Query: 117 SNYRPKM--VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRV--ADY 171
++ P M ++L SR+ +CIH EVS R G A + C L R + V Y
Sbjct: 98 AHTPPGMTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDAEVPICQY 157
Query: 172 MKNNPHLGDE---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E P+ I+DL GR+ CPYF R IV Y+YL+DP
Sbjct: 158 FEGFTLEGKESTLPVGIYSIDDLKEYGRSRNWCPYFTARYAIAHAHIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS 284
+ + E + S ++FDEAHN++ +C D+ S ++ + + N + R +
Sbjct: 218 AQVVSKEMTRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNNLTKLVQDMRDED 277
Query: 285 S---------------DETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
+ D ++ D IL +L + VP N + L F +
Sbjct: 278 TNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPKDVLTEVVPGNIRNADHFLSFLRRFI 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI---- 377
YI L ++ QE+ + +V++++ E K ++ ++ R IS++
Sbjct: 338 EYIKTRLRVHHVVQESPAGFLK--DVSSKICIERKPLRFCAERLSSLLRTLEISDMTEFG 395
Query: 378 -LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRL 433
L +I F + ++ + + + D V ++ + + C + IAM FSR
Sbjct: 396 ALTLITHFATLVSTYTKGFTIIIEPFDDKTPTV----SNPIMHFSCLDSSIAMAPVFSRF 451
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+ ++++TSGTLSPMD + + L + + + + IV G ++S +
Sbjct: 452 Q--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVSISSKFE 509
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G +V +A+ VPDG++ FF SY ++ +A W + I + + +
Sbjct: 510 TREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLR 563
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +E + ++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++
Sbjct: 564 YKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMF 621
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + +YL Q Q + ++ L+F A R Q VGR +
Sbjct: 622 GIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAL 668
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 669 RGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHL 701
>gi|448537080|ref|XP_003871257.1| Rad3 protein [Candida orthopsilosis Co 90-125]
gi|380355614|emb|CCG25132.1| Rad3 protein [Candida orthopsilosis]
Length = 792
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 198/764 (25%), Positives = 338/764 (44%), Gaps = 126/764 (16%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K +R
Sbjct: 60 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRR----------- 161
+ + L SR+ LC++ L+ + N +C++ TN +
Sbjct: 95 SELGYVEDFRGLGLTSRKNLCLN---PLISREKKGNVVDEMCRRVTNGQLKEKIEKGVVT 151
Query: 162 -------------CNHHSRVADYMKNNPH--LGDEPIDIEDLVNIGRTFGPCPYFMTREL 206
C++H ++ D +PH + + L+ + G CPYF R +
Sbjct: 152 EEDQVRDPAKYSLCSYHEKLYDL---DPHELVPSGVYSFDALIRYCKEMGTCPYFTVRRM 208
Query: 207 QKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTA 265
+I+ Y+YL+DP + E K+SI+IFDEAHN++ +C ++ S DL+ +L
Sbjct: 209 IPFCNIIIYSYHYLLDPKIADRVSRELSKDSIIIFDEAHNIDNVCIESLSLDLTEDVLKR 268
Query: 266 CISEAKNCIDISSTRRGQSSDETLNPDNFAI--LRALLLKLEKRI-AEVPINSKEL---- 318
A + + + S++ N + LR ++ E+ + PI ++L
Sbjct: 269 ATRGANKLAEAVEDMKAKDSEKLQNEYEQLVDGLRQAEVEREQEMFMSNPILPQDLLDEA 328
Query: 319 --GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--R 370
G + G + L +T K++ ++ E LQ K +KK C R
Sbjct: 329 IPGNIRKGEHFIAFLKRFIEYLKTRMKVLHVISETPTSFLQHLKELTYIDKKPLKFCSER 388
Query: 371 IESISNILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCF 421
+ + L++ + A A + V D +L+ + L + C
Sbjct: 389 LSLLVKTLELTEIEDFNALKDIATFATLVSTYDTGFQLILEPFETEGSTVPNPMLHFTCL 448
Query: 422 NPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGI 478
+ IA++ F R S+I+TSGT+SP+D + + LNF ++ + +T + I
Sbjct: 449 DASIAIKPVFERF--SSVIITSGTISPLDMYPK--MLNFQTVIQESYAMTLARRSFLPMI 504
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
V G ++S + R+ + G+ ++ A+I PDG+++FFPSY M+ I+ W+
Sbjct: 505 VTKGSDQVSISSRFEIRNDPSVVRNYGSLLIEFAKITPDGMVVFFPSYLYMESIISMWQ- 563
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
+ G L +W KHK +VE + LA+E Y ++ GAV +V RGKVSE
Sbjct: 564 -TMGVLDEVW----KHKLILVETPDAQETSLALETYRKAC--SNGRGAVLLSVARGKVSE 616
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G+DF H GR V++ G+PF ++ + E++ Q + ++ LSF
Sbjct: 617 GIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIKENDF----LSF-------- 664
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RFA +K+Q+ WI
Sbjct: 665 -DAMRHAAQCLGRVLRGKDDYGIMVLADRRFAR--KKAQLPKWI 705
>gi|406606908|emb|CCH41762.1| chromosome transmission fidelity protein 1 [Wickerhamomyces
ciferrii]
Length = 814
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 180/670 (26%), Positives = 302/670 (45%), Gaps = 84/670 (12%)
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVS 139
S K +L+ SRTHSQL Q +L ++ K + LGSR+QLCIH +VS
Sbjct: 196 SNSEKDVKVLFASRTHSQLSQFSSQLTLPHFPSSIVGIEEHLKYLSLGSRKQLCIHEKVS 255
Query: 140 LLRG-SAQNNACRFLCKKGTNRRCNHHSRVADY-MKNN-----PHLGDEPIDIEDLVNIG 192
+ S N AC L K+ + +C S D+ M+N H+ + DIEDL ++G
Sbjct: 256 KMSDVSLMNEACLDLQKQESKHKCEFFSSQKDHDMQNRIIEFRDHIFSKVQDIEDLNSVG 315
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
+ G CPY+ TR+ +++ PY L+ R L + K+ +++ DEAHNL
Sbjct: 316 KNLGVCPYYSTRKAIPGSEVITLPYQLLLQKSSRDALNISIKDCVVVIDEAHNLLDTIIS 375
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
S ++ +AC K + S R LN N R ++K+ K I
Sbjct: 376 LHSVAVTIDEFSACKKALKRYLGKFSRR--------LNGGN----RVNIIKITKFIDLFL 423
Query: 313 INSKELGFTKPGPYIYELL-------AD-LNITQETAYKLIDIVEVAAELLQEDKLQNKK 364
PG I +LL D LNI + Y + + E E + Q+
Sbjct: 424 KYVDSCDKKVPGKEI-DLLDVFKGTTGDMLNIRKLEKYLTVSKIAFKIESYMEKQDQSST 482
Query: 365 STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPG 424
T IE + + + + V+ DV+ +L++ +P
Sbjct: 483 PTLFKVIEFLKAV-------SYPSKEGKFFFDVKN------DVV------SLNYMLLDPS 523
Query: 425 IAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL-------RVENPHVITSKQIWAG 477
+E EV +IL GT+ P++ + L FP + H+I + +
Sbjct: 524 QIFKEIVE-EVKCVILAGGTMEPVEDYTNYL---FPYLEPSKVNKFSCGHIIPKENLNVF 579
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
I+ S + S+ R K++ G ++ ++ + VP G+++F PSY + ++ WK
Sbjct: 580 IIDKNKSEFEF--SFGKRQDNLMKEDFGRSLCSLMKNVPAGMVVFLPSYKFLADIVSVWK 637
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
++ IW I KK +E + + +EDY L G++ +V G++S
Sbjct: 638 KSN------IWNEINFIKKVFMESATTDV----LEDY--SLNVAEGKGSLLLSVVGGRLS 685
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EG++F+D RAVV+ G+PF + ++ ++ Y++ Q + G+ ++ + + + +Y
Sbjct: 686 EGINFSDDLARAVVMVGLPFPNVFSDELVSRKRYIESQVLEKTGDKRQ---AIEATKSFY 742
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVY 717
RAVNQ+VGR IRHR DY I F D+R+ P +S++S WI+ + S F ++
Sbjct: 743 ENICMRAVNQSVGRSIRHRGDYSTIYFFDKRYHTPRIRSKLSNWIKERVSETSSFDSILK 802
Query: 718 TLTRFFREER 727
FFRE++
Sbjct: 803 ETNSFFREKK 812
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAWRKS 62
D P++ YD Q+ +M V ++L + ESPTGTGKTL L+C+T+ W +S
Sbjct: 11 DYNHPYQPYDIQIDFMNAVNETLNGGYKIGIFESPTGTGKTLSLICSTVTWLRS 64
>gi|297842879|ref|XP_002889321.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
gi|297335162|gb|EFH65580.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata]
Length = 868
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 197/725 (27%), Positives = 315/725 (43%), Gaps = 122/725 (16%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ-NNACRFL 153
+ + SRTHSQL Q ++EL+ + + +V LGSR+ LCI+ +V L + N +C L
Sbjct: 172 VFFCSRTHSQLSQFVKELRKTVFASILNVVSLGSRKNLCINEDVLKLANVTRINESCLDL 231
Query: 154 CKK-----------GTNRRCNH------------HSRVADYMKNNPHLGDEPIDIEDLVN 190
KK G N R H ++ + E +DIEDLV
Sbjct: 232 QKKKKSQVSKKKNLGANVRIGRTKASCGCPLLRKHKLQREFKAES--FQQEAMDIEDLVQ 289
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+GR CPY+ +R + D+V PY L+ R+ LG+ KNS++I DEAHNL I
Sbjct: 290 LGRQMRTCPYYGSRRMAPAADLVILPYQSLLSKSSRESLGLSLKNSVVIIDEAHNLADIL 349
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA- 309
+ +T E C S R Q+ N I+ L L K +A
Sbjct: 350 -----LSMHDAKITLSQLEDIQCSIESYLGRFQNLLGAGNRRYIQIMLILTRALLKPLAS 404
Query: 310 EVPINSKELGFTKPGP-----------YIYELLADLNITQETAYKLIDIVEVA------- 351
+ +NS +G P I + L LNI KL+ ++ +
Sbjct: 405 DWNLNSVNVGLDTGNPSKSKPCGACSMAINDFLFSLNIDNINLVKLLAYIKESNIIHKVS 464
Query: 352 -----AELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAAD 406
+LQ+D + +++ + + S++L + + G R+ V ++A+
Sbjct: 465 GYGERVAMLQKDPVAHEEMSNLTSFRAFSDMLVALTNNNGDG-----RIIVSRTSSSAS- 518
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN- 465
G+ + + E E ++IL GTL P++ + L FP +
Sbjct: 519 ---GQPGGHIKYVMLTGAKLFSEVVD-EAHAVILAGGTLQPIEETRERL---FPWLPSDQ 571
Query: 466 ------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
H++ S+ I V GPSG + S+ +R S QELG + N+ +VP+G+
Sbjct: 572 LQFFSCSHIVPSESIMPIAVSHGPSGQSFDFSHSSRSSTRMIQELGLLMSNLVAVVPEGV 631
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
++FF S+ Q W N+ I RI K K+ EPR+++ + DY ++
Sbjct: 632 IVFFSSFEYETQVHTAWSNSG------ILRRIMKKKRVFREPRRNTEVEAVLRDYKEAIE 685
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD----------------- 622
S GA+ AV GKVSEG++F+D R VV+ G+P+ + +D
Sbjct: 686 --SERGAIMLAVVGGKVSEGINFSDSMCRCVVMVGLPYPSPSDIELLERIKHIEGLGDSD 743
Query: 623 ---PKVRLKRE-YLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
P V L + Y Q+ G K K G+++Y +AVNQ++GR IRH D
Sbjct: 744 SVKPSVTLVDDSYYSGDVQAGFGVLKSCK---RRGKEYYENLCMKAVNQSIGRAIRHEKD 800
Query: 679 YGAIIFCDERF----------AHPSRKSQISLWIQPHIQCYSK-FGDVVYTLTRFFREER 727
Y +I+ D R+ +HPS K + WI+ + +K +GDV L +FF+ +
Sbjct: 801 YASILLVDARYSNDPSKRTSHSHPSNK--LPKWIKDCLIYSTKGYGDVHRLLHQFFKHKN 858
Query: 728 ICGST 732
+ S+
Sbjct: 859 VENSS 863
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y Q+ +M + Q L ++LESPTGTGK+L ++C+ L W
Sbjct: 10 FPYKPYSIQIDFMNALYQFLDKGGVSMLESPTGTGKSLSIICSALQW 56
>gi|363751190|ref|XP_003645812.1| hypothetical protein Ecym_3517 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889446|gb|AET38995.1| Hypothetical protein Ecym_3517 [Eremothecium cymbalariae
DBVPG#7215]
Length = 756
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 201/756 (26%), Positives = 338/756 (44%), Gaps = 118/756 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVIFPYPKIYPEQYQYMCDLKKTLDIGGNSILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL++ +YR
Sbjct: 60 -------------------------QMHYPEHRKIVYCSRTMSEIEKALVELESLMDYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H VS R GS + CR + +
Sbjct: 95 KELEYQEEFRGLGLTSRKNLCLHPRVSKERKGSVVDEKCRRMTNGQAKTKKEQDIEANVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + +Y + +L E L+ CPYF R + +I+ Y+YL
Sbjct: 155 LCEYHENMYNY-QPEEYLPLGVYSFEKLIKYCEDKTICPYFTVRRMISMCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI--DIS 277
+DP + + E +N+I+IFDEAHN++ +C ++ S DL+ LL S N + +
Sbjct: 214 LDPRIEERVSREISQNAIVIFDEAHNIDNVCIESLSLDLTKDLLKRA-SRGANALGKKVD 272
Query: 278 STRR---------------GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE----L 318
R+ G +++ L+PD ++ +L + VP N + +
Sbjct: 273 EVRKVDTMKLQQEYQDLVKGLRANDILDPDEEPLIPTPVLSRDVLKEAVPGNIRRAEHFV 332
Query: 319 GFTKPG-PYIYELLADLNITQETA------YKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
F K Y+ + L++ ET K + +E ++L T
Sbjct: 333 SFLKRFIEYLKTRMKVLHVISETPNSFLHHLKQLTFIERKPLRFCSERLSLLVRTLEVDE 392
Query: 372 ESISNILKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE 429
N LK I F + + + + + + + A V + + + C + IA++
Sbjct: 393 IEDFNALKDIATFATLISTYESGFLLIIEPYEIENAAV----PNPIMRFTCLDASIAIKP 448
Query: 430 -FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGPSGY 486
F R S+I+TSGT+SP+D + + LNF V+ + +T K IV G
Sbjct: 449 VFERF--SSVIITSGTISPLDMYPK--MLNFGTVVQKSYSMTLAEKSFLPMIVTKGSDQV 504
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
++S + R+ + G+ +V A+I PDG+++FFPSY M+ I+ W+ + G L
Sbjct: 505 AISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIISTWQ--TMGILDE 562
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+W K+K +VE + LA+E Y ++ GA+ +V RGK+SEG+DF H
Sbjct: 563 VW----KYKLILVETPDAQETSLALETYRKAC--SNGRGAILMSVARGKISEGIDFDQHY 616
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GR V++ G+PF ++ + E+L Q + ++ LSF A R
Sbjct: 617 GRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF---------DAMRHAA 663
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RF+ +KSQ+ WI
Sbjct: 664 QCLGRVLRGKDDYGVMVLADRRFSR--KKSQLPKWI 697
>gi|302681585|ref|XP_003030474.1| hypothetical protein SCHCODRAFT_77555 [Schizophyllum commune H4-8]
gi|300104165|gb|EFI95571.1| hypothetical protein SCHCODRAFT_77555 [Schizophyllum commune H4-8]
Length = 792
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 203/782 (25%), Positives = 352/782 (45%), Gaps = 119/782 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FNIDDLPIVFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
+ L +Y SRT ++ + + ELK
Sbjct: 63 YPTKRKL----------------------------IYCSRTVPEIEKALAELKRLMAYRI 94
Query: 116 ----TSNYRPKM-----VILGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKG--- 157
T R K + L SR+ LCIH EVS +G + CR L C+KG
Sbjct: 95 QCAETPEQRAKEEAFTGLGLTSRKNLCIHPEVSKEKKGVVVDARCRDLTNAVVCEKGRAD 154
Query: 158 --TNRRCNHHSRVADYMKNNPHLGDEP--IDIEDLVNIGRTFGPCPYFMTRELQKTVDIV 213
+ C H + + P P + D++ GR CPYF+ R + VD+V
Sbjct: 155 PGSVELCEWHENLG---QREPGQLIPPGIWTLADVLQYGRDNTICPYFLVRRMMPFVDVV 211
Query: 214 FAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE--- 269
++YL+DP + E K++I++FDEAHN++ +C ++ S DL+ +L +
Sbjct: 212 IYSFHYLLDPKVADQVSKELSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVGK 271
Query: 270 -AKNCIDISSTRRGQSSDE-----------TLNPDNF-AILRALLLKLEKRIAEVPINSK 316
+ +I +T + DE + PD+ + LL + VP N +
Sbjct: 272 LGEKIEEIKTTDAAKLQDEYARLVEGLQEASDRPDDADGFMSNPLLPDDLLNEAVPGNIR 331
Query: 317 E----LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQNK-K 364
+ + F K Y+ + L++ ET + DI + L+ ++LQ+ +
Sbjct: 332 KAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLIR 391
Query: 365 STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPG 424
+ R++ S + K+ T S Y R + + D + + C +P
Sbjct: 392 TLELSRLDEYSALQKVA--SFATLVSTYERGFILILEPFETDN-ATVPNPIFHFACLDPS 448
Query: 425 IAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGP 483
+A+Q F R S+++TSGT+SP+D + + L+ ++ P +T ++ G
Sbjct: 449 LAIQPVFERF--SSVVITSGTISPLDMYPKMLQFTPVVQESYPMTLTRNSFLPLVITRGS 506
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
++S + R+ + G+ ++ ++IVPDG++ FFPSY M+ +A W + G
Sbjct: 507 DQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GI 564
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
L +W HK VE S+ +A+E+Y + GAV +V RGKVSEG+DF
Sbjct: 565 LNEVW----NHKLIFVETPDSNETSIALENYRRACDN--GRGAVLLSVARGKVSEGIDFD 618
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
+ GRAV++ G+P+ ++ + EYL + + E+ LSF A R
Sbjct: 619 HNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LSF---------DAIR 665
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYTLTR 721
Q VGRV+R + D+G ++F D+RF ++S++ WI +I + S D+ TL++
Sbjct: 666 NAAQCVGRVLRGKTDWGLMVFADKRFGRSDKRSKLPRWINQYITETASNLSTDMAITLSK 725
Query: 722 FF 723
F
Sbjct: 726 IF 727
>gi|440633923|gb|ELR03842.1| hypothetical protein GMDG_01371 [Geomyces destructans 20631-21]
Length = 874
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 190/680 (27%), Positives = 290/680 (42%), Gaps = 114/680 (16%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP-----------------KMVILGSREQLCIHREVS 139
I Y SRTHSQL Q I EL+ P K + LGSR+ LCI+ V+
Sbjct: 222 IFYCSRTHSQLTQFINELRRVKIPPALQPEPAPVKPLLGEEFKHLTLGSRKNLCINPSVN 281
Query: 140 LLR-GSAQNNACRFLCKKGT--NRRC------NHHSRVADYMKNNPHLGDEPIDIEDLVN 190
LR +A N C L + GT +++C + V D+ H DIE+L +
Sbjct: 282 KLRSATAINERCMELQQSGTATDKKCCFLPNQQNQPLVNDF---RDHALATIRDIEELGD 338
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ +R K +IV PY L+ R+ LGV K ++I DEAHNL
Sbjct: 339 LGKEMKICPYYASRSAIKPAEIVTLPYPLLLQKSAREALGVSVKGHVVIVDEAHNL---- 394
Query: 251 ADAASFDLSSGL--LTACISEAKNCIDISSTRRGQSSDETLNP--DNFAILRALLLKLEK 306
D +G+ +T +S+ K S + GQ N + A +++L
Sbjct: 395 -----MDAIAGIYGITVSLSQLKR----SRAQIGQYLQRFRNKLKGKNRVYVAQVVRLID 445
Query: 307 RIAEV---PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK 363
+A+ + K +P ELL + Q YKL+ LQ+ KL K
Sbjct: 446 SLAQFLDGKVGQKGEMVVEPS----ELLVGKGVDQINLYKLM-------RYLQDSKLARK 494
Query: 364 KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANA------------------- 404
+E IIF + A + R+ DA +
Sbjct: 495 -------VEGY-----IIFAEGAAADNGNPAAKARKPDATSEAATPTLQHIQSLLVALTN 542
Query: 405 ----ADVLKGKASRT----LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELK 456
+ K T L + +P QE E ++IL GT+SPM + L
Sbjct: 543 PSKEGRLFYAKDPETSDIVLKYMLLDPTHHFQEIVS-EARAVILAGGTMSPMADYTSHLL 601
Query: 457 LNFPLR----VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ---ELGNTIV 509
P + HVI + + A + GP+G ++ R E ++ ELG ++
Sbjct: 602 SYLPAERITTLSCGHVIPKENLLAWTLSKGPTGKPFEFTFSKRAGREGEEMIDELGRAVL 661
Query: 510 NIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPL 569
NI IVPDG+++FFPSY +D I W+ +IWER+ K K E + + +
Sbjct: 662 NICTIVPDGIVVFFPSYSYLDTVIKRWEVILEPGRPSIWERLGKRKALFREAKDAKVGAE 721
Query: 570 AIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
+ AK D G + +V GK+SEG++F+D GR VVI G+P+ + + + K
Sbjct: 722 YVLTEYAKAID-GNQGGLLLSVVGGKMSEGINFSDRLGRCVVIVGLPYPNIMSGEWKAKM 780
Query: 630 EYLD------LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
Y++ L+A +G ++Y RAVNQ+VGR IRH++D+ +II
Sbjct: 781 SYIETATIERLEAAGEGTTSSRQAAGKAEAREFYENACMRAVNQSVGRAIRHKNDFASII 840
Query: 684 FCDERFAHPSRKSQISLWIQ 703
D RF + ++ WI+
Sbjct: 841 IVDGRFGKEGIRRKLPGWIR 860
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAW 59
+D P+ Y Q +M+ V L+ + +LESPTGTGK+L L+CA+L W
Sbjct: 23 VDFHHPYTPYSIQEDFMQTVYSVLERGDSSVGILESPTGTGKSLSLICASLTW 75
>gi|402224656|gb|EJU04718.1| DNA repair helicase [Dacryopinax sp. DJM-731 SS1]
Length = 798
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 198/774 (25%), Positives = 355/774 (45%), Gaps = 139/774 (17%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I G+ + FP++ Y Q YM + ++L + + +LE P+GTGKT+ LL
Sbjct: 3 FNIDGLPIIFPYDRIYPEQYSYMCDLKKTLDAQGHGVLEMPSGTGKTVSLL--------- 53
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYR- 120
S + S Q ++Y SRT ++ + + EL + YR
Sbjct: 54 -------------------SLIVSYQQHSPHPRKLIYCSRTVPEIEKALSELQRLMKYRV 94
Query: 121 ------------PKMVILG--SREQLCIHREVSL-LRGSAQNNACRFL-----CKKGTNR 160
+ LG SR+ LC+H +VS +G + CR L C+KG
Sbjct: 95 SQAETPEERMKEESFIGLGLTSRKNLCLHPDVSKEKKGKVVDARCRDLTNSAACEKGRAN 154
Query: 161 -----RCNHHSRVADYMKNN---PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
C+ H R+ + N P + + +++ GR G CPYF R + VD+
Sbjct: 155 PGSVPLCDWHERLGEKEPGNLIPPGI----YTLAEVLQYGRDEGVCPYFTIRRMMPFVDV 210
Query: 213 VFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL-------- 263
+ ++YL+DP + + E+ K++I++FDEAHN++ +C ++ S DL+ +L
Sbjct: 211 IIYSFHYLLDPKVAEQVSKEFSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSATRSVV 270
Query: 264 --TACISEAKNCIDISSTRR---------GQSSDETLNPDNF---AILRALLLKLEKRIA 309
T I E K D S + ++++ET + D F A+L LLK
Sbjct: 271 RLTEKIEEIKET-DASKLQDEYAKLVEGLQEANNETSDEDAFVANAVLPDDLLK-----E 324
Query: 310 EVPINSKE----LGFTKPG-PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK 364
+P N ++ + F K Y+ + L++ ET + + L++ ++
Sbjct: 325 AIPGNIRKAEHFIAFLKRFVEYLKTRMRVLHVVAETPLSFL-------QHLKDITYIERR 377
Query: 365 STTAC--RIESISNILKIIFRDKGTA--HSAYYRVHVREADANAADVLKGKASRT----- 415
C R++S+ L++ D+ A A + V + +L+ + T
Sbjct: 378 PLRFCAERLQSLVRTLELNQLDEYFALQKVASFATLVATYEKGFLLILEPFETETATVPN 437
Query: 416 --LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
+ C +P +A++ F R S+++TSGT+SP+D + + L+ ++ P +T
Sbjct: 438 PIFHFTCLDPSLAIKPIFERF--SSVVITSGTISPLDMYPKMLQFTPVIQESYPMTLTRN 495
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
++ G ++S + R+ + G+ ++ ++IVPDG++ FFPSY M+
Sbjct: 496 CFLPLVITRGSDQVAVSSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESI 555
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
+A W + G L +W K+K VE ++ +A+E+Y + + GAV +V
Sbjct: 556 VAAWNDM--GILNEVW----KNKLIFVETPDANETSIALENY--RRACNNGRGAVMLSVA 607
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGKVSEG+DF + GRAV++ G+P+ +R + EYL + + E+ L+F
Sbjct: 608 RGKVSEGIDFDHNYGRAVIMFGVPYQYTQSRILRARLEYLRDAYRIRESEF----LAF-- 661
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGRV+R + D+G ++F D+R+A +++++ W+ +I
Sbjct: 662 -------DAMRNAAQCVGRVLRGKTDWGLMVFADKRYARADKRAKLPRWMNQYI 708
>gi|322706322|gb|EFY97903.1| DEAD-2 domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 924
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 188/691 (27%), Positives = 319/691 (46%), Gaps = 104/691 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP-----------------KMVILGSREQLCIHREVS 139
I YTSRTHSQL Q I EL+ + K++ L SR++LCI+ V+
Sbjct: 240 IYYTSRTHSQLSQFITELRRPKFPSSLPTSLAEKKSSVEETVKLLPLSSRQRLCINPSVA 299
Query: 140 LLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGR 193
L GS Q N+ C L + + ++C + + + + D + DIEDL +G+
Sbjct: 300 RL-GSVQAINDRCAELQQSKSTKKCPYVPK-EELLSQTHQFRDSALATVPDIEDLHQLGK 357
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD- 252
+ CPY+ +R +I+ PY L+ R+ LG++ + +++I DEAHN+ A+
Sbjct: 358 SLAVCPYYASRSALPGAEIITLPYPLLLQRSAREALGIKLEGNVVIIDEAHNVMDAVANV 417
Query: 253 -AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
AA LS + + + + I R G+ + +N N + ++ L + +
Sbjct: 418 HAAEIKLSD------LHKGRGMLGIYVKRFGKKL-KGVNRVNVGRVGRVIDGLTEWM--- 467
Query: 312 PINSKELGFTK-PGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR 370
+ GF P + ++ ++T+ I++ E+ + +QE KL K + A
Sbjct: 468 ---NGAKGFKLIPRQQQHGIVDANDLTRPKGIDQINMFELI-QYIQESKLAYKIESYAAH 523
Query: 371 IESISNILK-------------IIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
+E+ ++ K + F T S+ R+ ++ A DV LS
Sbjct: 524 VENENDSGKPGTKSSTPVLHTLVSFLVALTNPSSEGRIFYQKTSGPAQDV-------QLS 576
Query: 418 WWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLRVENP--------H 467
+ +P A FS + ++IL GT+SP D + L FP + +P H
Sbjct: 577 YLLLSPTHA---FSSIVSSARAVILAGGTMSPFDDYKNHL---FPA-LADPKVTTLSCGH 629
Query: 468 VITSKQ--IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
VI + +W + P G SY+ R E +ELG I+NI +VPDG+++FFPS
Sbjct: 630 VIPRENLCVWT-LTGTRPGGSSFEFSYQRRGDSEMVKELGLAILNICSVVPDGVVVFFPS 688
Query: 526 YYLMDQCIACWKNTSHGN---LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS 582
Y +++ +A W + G+ TTIW+R+ K E + S + E A L +
Sbjct: 689 YGYLEEVVAAWSRRAPGDKNPQTTIWDRLQTRKMVFRETKGCSSDEVLQEYSQAILGNGG 748
Query: 583 TS--------GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD- 633
++ GA+ +V GK+SEG++F+D GR V++ G+P+ + P+ + K +Y++
Sbjct: 749 STTGLVKGKGGALLLSVVGGKMSEGINFSDRLGRCVMVVGLPYPNIASPEWKAKMDYIES 808
Query: 634 -----LQAQSQGGEYKETK-----LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
LQ + K TK + + D+Y RAVNQ++GR IRH+ DY AI+
Sbjct: 809 TTLANLQDSRRDAGPKLTKDEAAARAKQAARDFYENACMRAVNQSIGRAIRHKGDYAAIV 868
Query: 684 FCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
D R+A + ++ WI+ + GD
Sbjct: 869 LADRRYATERIQGKLPGWIRSGMDARGSGGD 899
>gi|358390776|gb|EHK40181.1| hypothetical protein TRIATDRAFT_296192 [Trichoderma atroviride IMI
206040]
Length = 871
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 187/692 (27%), Positives = 317/692 (45%), Gaps = 95/692 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKT------------------SNYRPKMVILGSREQLCIHREV 138
I YTSRTHSQL Q I EL+ S K++ L SR++LCI+ V
Sbjct: 206 IYYTSRTHSQLSQFITELRRPVFPSSLPTSVAKGSDIPSTEPVKLLPLSSRQKLCINPSV 265
Query: 139 SLLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIG 192
+ L GS Q N+ C L + ++ +C+ + + + D + DIEDL +G
Sbjct: 266 ARL-GSVQAINDRCTELQQARSSTKCSFAPK-EELLSQTHQFRDSTLATLPDIEDLHQLG 323
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
++ CPY+ +R + +I+ PY L+ R+ LG++ + +++I DEAHN+ D
Sbjct: 324 KSLSVCPYYASRGVLPGAEIITLPYPLLLQQSAREALGIKLEGNVVIIDEAHNI----LD 379
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
A S ++ L + + + + + R G+ + +N N + ++ L + +
Sbjct: 380 AISNVHAAELQLSDLRRGRQMLGVYVKRFGKKL-KGINRVNVGRVGRVIDGLTEWLEGAL 438
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE 372
E G P +L I Q Y+LI + +QE KL K + +E
Sbjct: 439 KLKDEHGIVDPN----DLTRHKGIDQINVYELI-------QYIQESKLAYKIESYVAHVE 487
Query: 373 S-----ISNILK---------IIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSW 418
+ S LK + F T S+ R+ ++ AADV L++
Sbjct: 488 NDEEGKKSGPLKAGSPVLHALVSFLIALTNLSSEGRIFYQKTHGAAADV-------KLTY 540
Query: 419 WCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPL-------RVENPHVI 469
+P A FS + ++IL GT+SP + +L FP + HVI
Sbjct: 541 LLLSPTHA---FSSIVSSARAVILAGGTMSPFQDYKDQL---FPTLDSTKVTSLSCGHVI 594
Query: 470 TSKQ--IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
+ +W + P S++ R + + +LG +I+N+ IVPDG+++FFPSY
Sbjct: 595 PRENLCVWT-LASSHPGSPPFEFSFKQRGNRDMMNQLGLSILNVCNIVPDGVVVFFPSYS 653
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM-----AKLKDTS 582
+D+ I W+ GN IW+R+ + +K V + + DY A+ +
Sbjct: 654 YLDEIIKIWQQPQSGNSHPIWDRL-QLRKMVYRDTKGESSDDVLRDYSQMILGARAAGDT 712
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS---Q 639
+GA+ +V GK+SEG++F+D GR V++ G+P+ + P + K EY++ + +
Sbjct: 713 RTGALLLSVVGGKMSEGINFSDRLGRCVIVIGLPYPNIASPDWKAKIEYIESTTEERLIK 772
Query: 640 GGEYKE--TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
G+ K T + + D+Y RAVNQ++GR IRHR DY AII D R+ + +
Sbjct: 773 EGQSKSEATAQAKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIILVDRRYGTGRIRGK 832
Query: 698 ISLWIQPHIQCYSK---FGDVVYTLTRFFREE 726
+ WI+ ++ S ++ L FFR++
Sbjct: 833 LPGWIRDGLEKDSHEKGISALMGALGGFFRKK 864
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCN--ALLESPTGTGKTLCLLCATLAW 59
+++ +D PF Y Q +M V Q LQ +LESPTGTGK+L L+CA+L W
Sbjct: 11 HELSNLDFHHPFTPYTVQNQFMRTVYQILQTGEGQVGILESPTGTGKSLSLICASLTW 68
>gi|346975762|gb|EGY19214.1| fanconi anemia group J protein [Verticillium dahliae VdLs.17]
Length = 838
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 185/669 (27%), Positives = 300/669 (44%), Gaps = 93/669 (13%)
Query: 100 TSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRG-SAQNNACRFLCKKGT 158
S H Q IQE K + L SR++LCI+ VS L+ SA N+ C L + +
Sbjct: 220 VSGEHGAAVQAIQE------PVKHLPLSSRQKLCINPAVSRLKTQSAINDRCAELQQPKS 273
Query: 159 NRRCNHHSRVADYMKNNPHLGDEPI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFA 215
+C + + + K + DIEDL ++G++ CPY+ +R +I+
Sbjct: 274 KNKCPYVPKEENLNKTHQFRDTAHATLPDIEDLFHLGKSLEVCPYYASRTAIAGTEIITL 333
Query: 216 PYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID 275
PY L+ R+ LG++ + +I+I DEAHN+ A+ + ++ G L A+ +
Sbjct: 334 PYPLLLQKTAREALGIKLEGNIVIVDEAHNIMDAVANVYASEIRLGEL----KRARLMLG 389
Query: 276 ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
+ R G+ LK E R+ + E G ELL
Sbjct: 390 VYVKRFGKK-----------------LKGENRVM---VGQPEQGIVD----AKELLRSKG 425
Query: 336 ITQETAYKLIDIVEVA---------AELLQEDKLQNK---KSTTACRIESISNILKIIFR 383
I Q +KLI ++ + ++ED NK +S+T +S ++ +
Sbjct: 426 IDQINLFKLIQYIQTSKLAYKIESYVAYVEEDD-SNKAAPRSSTPVLHTFVSFLVSL--- 481
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSG 443
T S+ R+ ++ A D+ LS+ +P A + ++IL G
Sbjct: 482 ---TNLSSEGRIFYQKLPGAAPDI-------QLSYLLLSPTHAFSSIA-TSARAVILAGG 530
Query: 444 TLSPMDSFAQELKLNFPLRVENP-------HVITSKQIWAGIVPVGPSG---YLLNSSYR 493
T+SP D + L FP E HVI + + +G S++
Sbjct: 531 TMSPFDDYRAHL---FPYLPEPKLTTLRCGHVIPPSNLCVRTLAASRAGDPNSTFEFSFQ 587
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R +LG I+N+ +VPDG+++FFPSY +D+ +A W+ T+ G T IW R+ +
Sbjct: 588 RRSDKAMVNQLGLAILNMCAVVPDGIVVFFPSYGYLDEVVAAWETTAAGESTPIWTRMQQ 647
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS-----GAVFFAVCRGKVSEGLDFADHAGR 608
K E + +S + A L D ++ GA+ +V GK+SEG++F+D GR
Sbjct: 648 RKAVFKESKGASSEEVLALYSEAILGDGTSDAPKPRGALLLSVVGGKMSEGINFSDRLGR 707
Query: 609 AVVITGMPFATMTDPKVRLKREYLD-------LQAQSQGGEYKETKLSFLSGEDWYNQQA 661
AV++ G+P+ M P+ + K EY++ L+A+ K + + D+Y
Sbjct: 708 AVMVVGLPYPNMHSPEWKAKTEYVEMTVLKRALEAEPGVDRAKAQAAAKQAARDFYENAC 767
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC---YSKFGDVVYT 718
RAVNQ++GR IRHR DY AII CD R+ K ++ WIQ IQ S ++
Sbjct: 768 MRAVNQSIGRAIRHRGDYAAIILCDRRYGTERIKGKLPGWIQGGIQGDGQESGLPQLMGA 827
Query: 719 LTRFFREER 727
L+ FFR +R
Sbjct: 828 LSGFFRGKR 836
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAWRKS 62
ID P+ YD Q +M + + LQ N +LESPTGTGK+L L+CA L W ++
Sbjct: 8 IDFHHPYTPYDVQTQFMTEAYKVLQTGNGQIGILESPTGTGKSLSLICAALTWLRN 63
>gi|345563336|gb|EGX46339.1| hypothetical protein AOL_s00110g163 [Arthrobotrys oligospora ATCC
24927]
Length = 920
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 185/708 (26%), Positives = 308/708 (43%), Gaps = 96/708 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP------------------KMVILGSREQLCIHREV 138
I Y SRTHSQL Q EL+ + P K + LGSR+ LCI+ +V
Sbjct: 225 IFYCSRTHSQLSQFTAELRRVHLPPTYEDDLTEESEEKPEEVVKHLSLGSRKLLCINDKV 284
Query: 139 SLLRGSAQN---------------NACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI 183
+ SA N C FL K N+R + D L D
Sbjct: 285 NTPSASANTVNDRCLDLQQSKSAENKCPFLLPKADNQRNVLNREFRDLA-----LADIK- 338
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIEDL +G C Y+ +RE K +I+ PY L+ R+ L + KN I+I DEA
Sbjct: 339 DIEDLRGVGEKLKICGYYASREAIKPTEIITLPYPLLLQKSSREALKISVKNHIIIIDEA 398
Query: 244 HNLEGICADAASFDLSSGLLTACIS-------------EAKNCIDISSTRRGQSSDETLN 290
HNL ++ S +S LT C + N + ++ R + +T
Sbjct: 399 HNLMDAVSNIHSVSISLSQLTKCADNLAAYILKFGKKLKGGNRVYVAQCHRLVKTLKTWL 458
Query: 291 PDNFAIL-RALLLKLEKRIAEVPINSKEL---------GFTKPGPYIYELLADLNITQET 340
D F+I A+ K+ +I + + +L K G Y+ E + T
Sbjct: 459 EDKFSIQPNAIDPKVPPKIPDGTVKQGDLLQLKGIDQIHILKLGKYLEESKLARKVEGYT 518
Query: 341 AYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIF---RDKGTAHSAYYRVHV 397
++ + + A+ + + +K T+ + +S++ + + Y +
Sbjct: 519 MFQENEKLADQAKKQKIPAAKARKVATSGGLPVLSHVYAFLLTLTNPEKEGKVFYGPID- 577
Query: 398 READANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
DA A D +A+ + +P ++ + +++L GT+ PM + L
Sbjct: 578 ---DAGAKDF---RAAVGFRYMLLDPTHHFKDLVE-DARAVVLAGGTMEPMSDYVNHLFP 630
Query: 458 NFP---LR-VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
P LR V HVI + A VP+G + ++ R+ + ELG TI N+ +
Sbjct: 631 YLPSERLRMVSCGHVIPQDNMLAMTVPMGVTNQAFEFTFEKRNGPKLITELGKTIFNLCK 690
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
++P G+++FFPSY ++ + W+ +I+E + K E + SS + D
Sbjct: 691 VIPHGVVVFFPSYAYLETVVKVWEEKGPEGTASIYENLQSRKAVFREAKGSSSVEDILRD 750
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y AK D GA+ +V GK+SEG++F+D+ GR V++ G+PF + + + K E+++
Sbjct: 751 Y-AKAVDEG-KGALLLSVVGGKMSEGINFSDNLGRGVIMVGLPFPNIHSAEWKAKLEFVE 808
Query: 634 L-------QAQSQGGEYKETKL---SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
A ++G TKL + + + +Y RAVNQ++GR IRHR+DY I+
Sbjct: 809 QSMITRSESAVAEGTSLDATKLQQEAKAAAQGYYENACMRAVNQSIGRAIRHRNDYAVIL 868
Query: 684 FCDERFAHPSRKSQISLWIQPHIQCYS-------KFGDVVYTLTRFFR 724
D+RF+ + ++ WI+ + KFG V+ + +FFR
Sbjct: 869 LLDKRFSRDNIWGKLPKWIRDGTSGVAAGKAGEVKFGMVMTGVGKFFR 916
>gi|320583366|gb|EFW97581.1| DNA repair helicase RAD3 [Ogataea parapolymorpha DL-1]
Length = 1061
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 202/758 (26%), Positives = 335/758 (44%), Gaps = 122/758 (16%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 299 FFIDDLPVLFPYPKIYPEQYAYMCDIKRTLDVGGNCILEMPSGTGKTISLLSLTVAY--- 355
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K YR
Sbjct: 356 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEYRS 390
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLC-----------KKGTNR 160
K + L SR+ LC+H S R G + CR + + T++
Sbjct: 391 KELGFVEDFRGLGLTSRKNLCLHPVASRERKGVVVDEMCRRMTNGQLKARIEQGQASTDQ 450
Query: 161 RCNHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
C+ H ++ Y K+ +L + E L+ + G CPYF R + +I+ Y+Y
Sbjct: 451 LCSFHEKL--YEKDPANLVPPGVYSFEQLMKYCKMEGTCPYFTIRRMMPFCNIIIYSYHY 508
Query: 220 LIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL-------TACISEAK 271
L+DP + + E ++SI+IFDEAHN++ +C ++ S DL+ +L A + +
Sbjct: 509 LLDPKIAERVSKELSRDSIIIFDEAHNIDNVCIESLSLDLTEDVLRRASKGANALARKVE 568
Query: 272 NCIDISSTR---------RGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK 322
S R G E + D A + +L + VP G +
Sbjct: 569 EVKKTDSKRLQDEYEKLVEGLRESEIYHTDEDAFMVNPVLPDDVLTEAVP------GSIR 622
Query: 323 PGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISN 376
+ L +T K++ ++ E LQ K ++K C R+ +
Sbjct: 623 RAEHFISFLKRFIEYLKTRMKVLHVISETPVSFLQHLKQLTFIDRKPLRFCSERLSLLVR 682
Query: 377 ILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAM 427
L+++ ++ A A + V D +L+ + L + C + IAM
Sbjct: 683 TLEVVEIEEFMALKDIATFGTLVSTYDTGFVLILEPYETENATVPNPILRFACLDASIAM 742
Query: 428 QE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGPS 484
+ F R S+I+TSGT+SP+D + + LNF V+ + +T + +V G
Sbjct: 743 KPIFERF--SSVIITSGTISPLDMYPR--MLNFETVVQESYTMTLDRRSFLPMVVTKGSD 798
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
++S + R+ + G ++ ++I PDG+++FFPSY M+ I+ W+ + G L
Sbjct: 799 QVAISSRFEIRNDPSVVRNYGTLLIEFSKITPDGMVVFFPSYLYMESIISQWQ--TMGIL 856
Query: 545 TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W K+K +VE + LA+E Y ++ GAV +V RGKVSEG+DF
Sbjct: 857 DEVW----KYKLILVETPDAQETSLALETYRKAC--SNGRGAVLLSVARGKVSEGIDFDH 910
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
H GR V++ G+PF ++ + E+L Q + ++ LSF A R
Sbjct: 911 HYGRTVLMIGIPFQYTESRILKARLEFLRDHYQIRENDF----LSF---------DAMRH 957
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RFA +KSQ+ WI
Sbjct: 958 AAQCLGRVLRGKDDYGVMVLADRRFA--KKKSQLPKWI 993
>gi|407037674|gb|EKE38739.1| DNA repair helicase, putative [Entamoeba nuttalli P19]
Length = 1034
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 198/749 (26%), Positives = 329/749 (43%), Gaps = 143/749 (19%)
Query: 13 FPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP++ Y Q+ M + Q+++ + L+ESPTGTGKTL LL +TL +
Sbjct: 86 FPYQPPYQPQIEMMNSIQQAVKEGKHLLMESPTGTGKTLVLLHSTLTF------------ 133
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQ 131
D + ++Y SRTH+QL QV+ E K K ++L SR+
Sbjct: 134 ------------------PDMR---VVYASRTHNQLAQVVNETKKIG-NIKGIVLASRDL 171
Query: 132 LCIHREV--------------SLLRGSAQNNACRFLCKKGTNRRCNHHSRV--ADYMKNN 175
CI+ + +LL N C + + H A Y + N
Sbjct: 172 YCIYNPIKTCDDKNYWCTAKPNLLLKLKHINPCPYRPFGDDGKVLPHVVMACQAVYKELN 231
Query: 176 PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV---- 231
+ + E+LV + + CPY+ R ++ PYN++ R +
Sbjct: 232 GIIKPQ----EELVKVCQKHNLCPYYYARWATVRSKLILCPYNFVTSVSIRHSSDIFLID 287
Query: 232 ----EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDE 287
+ +L+ DEAHN+E D+ +F+ + LL I I R Q
Sbjct: 288 QNSAHQREFVLVMDEAHNVEDAFMDSLTFNFTESLLNQTIE----TIKFHKKRVKQI--- 340
Query: 288 TLNPDNFAILRALLLKLEKRIAEVPI--NSKELGFTKPGPYIYELLADLNITQ--ETAYK 343
P+NF + +LL +L I I ++ L + Y+Y + D E +
Sbjct: 341 ---PENFLTI-SLLTELISTIESFSIWMKNRSLPYKDSEHYLYGVFEDQAFLPFVERSPP 396
Query: 344 LIDIVEVAAELL--------------QEDKLQNKKSTTACRIESISNILKIIFRDKGTAH 389
++E +E + + ++ S T IE I +++ +
Sbjct: 397 SSRLLEAISEYIKVVDDLDDLDIFTREPHAIRYINSFTTQYIEMILFYIQVF---RTPTL 453
Query: 390 SAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMD 449
+ ++++ V D N R + + C +P + M ++ V S+I SGTLSPM
Sbjct: 454 TKFFKIVV--TDHNGL--------REMLFRCLSPSLPM-SLLQMVVRSVIFASGTLSPMK 502
Query: 450 SFAQELKL------NFPLR-----VENPHVITSKQIWAGIV---PVGPSGYLLNSSYRNR 495
+ AQEL + +F + + HV+ +++ I+ +G S + ++
Sbjct: 503 AMAQELDIKEHVYKDFIISPGYRMLSTEHVVPPSRVFGRIIISSSLGKSFIFTKKTSQDN 562
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ IE + G+T+ + G L+FF SY ++++ + WK HG I+ ++ K K
Sbjct: 563 EMIE---QAGDTMFRVLSKSRGGALVFFSSYNMLNRIVELWKQ--HG----IYTQLNKLK 613
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+E + + F ++Y + S GAVF V RGK+SEG+DF D R V++ G+
Sbjct: 614 AIFIESKDKNEFKKDFKEYQIQ----SKKGAVFLGVFRGKLSEGIDFGDDMARLVIVVGI 669
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS-FLSGEDWYNQQASRAVNQAVGRVIR 674
P+ ++ D V LKREY ++ K S LSG +WY+ QA RAVNQAVGRVIR
Sbjct: 670 PYPSLGDINVNLKREY---------NNHENLKNSDCLSGSEWYSIQALRAVNQAVGRVIR 720
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
H +DYGA + D+R++ S K +S W++
Sbjct: 721 HINDYGAFLLFDKRYSTNSVKEMLSGWMK 749
>gi|340518246|gb|EGR48488.1| predicted protein [Trichoderma reesei QM6a]
Length = 857
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 184/696 (26%), Positives = 319/696 (45%), Gaps = 90/696 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP------------------KMVILGSREQLCIHREV 138
I YTSRTHSQL Q I EL+ + P K++ L SR++LCI+ V
Sbjct: 189 IYYTSRTHSQLSQFISELRRPAFPPSLPPSVAKASDVSPTEPVKLLPLSSRQKLCINPFV 248
Query: 139 SLLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIG 192
+ L GS Q N+ C L + ++ +C+ + + + D + DIEDL ++G
Sbjct: 249 ARL-GSVQAINDRCAELQQAKSSSKCSFVPK-EELLSQTHQFRDSALATIPDIEDLHHLG 306
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
++ CPY+ +R +I+ PY L+ R+ LG++ + +++I DEAHN+ D
Sbjct: 307 KSLSICPYYASRVALPGAEIITLPYPLLLQQSAREALGIKLEGNVVIIDEAHNI----LD 362
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFA----ILRALLLKLEKRI 308
A S ++ + + + + + + R G+ + +N N I+ L LE +
Sbjct: 363 AISNVHAAEIQLSDLRRGRQMLGVYVKRFGKKL-KGINRVNVGRVGRIIDGLSEWLEGAL 421
Query: 309 AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTA 368
+ + E G P +L I Q Y+LI + +QE KL K +
Sbjct: 422 -KFKVCLDEHGIVDPN----DLTRHKGIDQMNIYELI-------QYIQESKLAYKIESYV 469
Query: 369 CRIESISN------------ILKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASR 414
+E+ + +L + F T S+ R+ ++ A DV
Sbjct: 470 AHVEAEGDSSNSGPPKAATPVLHTLVSFLIALTNLSSEGRIFYQKVHGAATDV------- 522
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF-PLRVEN---PHVIT 470
L++ +P A + ++IL GT+SP + +L P +V + HVI
Sbjct: 523 KLTYLLLSPTHAFSSVAS-SARAVILAGGTMSPFQDYKDQLFPTLEPGKVTSLSCGHVIP 581
Query: 471 SKQ--IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ +W + P+ S++ R + E +LG I+N+ IVPDG+++FFPSY
Sbjct: 582 PENLCVWT-LASSNPASPPFEFSFKQRGNREMMTQLGLAILNVCNIVPDGVVVFFPSYGY 640
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL-----KDTST 583
+D+ + W+ + TIW+R+ + +K V + + DY +
Sbjct: 641 LDEIVKVWQQRQGESSQTIWDRL-QARKSVFRDSKGESSEDVLRDYSQAILGVRPAGDKR 699
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS----Q 639
+GA+ +V GK+SEG++F+D GR V++ G+P+ + P + K EY++ ++ +
Sbjct: 700 TGALLLSVVGGKMSEGINFSDRLGRCVMVVGLPYPNIASPDWKAKLEYIESTTEARLVKE 759
Query: 640 GGEYKE-TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
G E T + + D+Y RAVNQ++GR IRHR DY AII D R+ + ++
Sbjct: 760 GRNSGEATAQAKQAARDFYENACMRAVNQSIGRAIRHRGDYAAIILVDRRYGTDRIRGKL 819
Query: 699 SLWIQPHIQCYSK---FGDVVYTLTRFFREERICGS 731
WI+ ++ S G ++ L FFR++ G+
Sbjct: 820 PGWIRDGLEKESHERGLGALMGALGAFFRKKSQAGN 855
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAWR 60
+++ +D P+ YD Q +M+ V Q L+ N +LESPTGTGK+L L+CA+L W
Sbjct: 9 AHELSSLDFHHPYTPYDVQNQFMQTVYQVLETGNGQVGILESPTGTGKSLSLICASLTWL 68
Query: 61 KS 62
++
Sbjct: 69 RN 70
>gi|74219327|dbj|BAE26794.1| unnamed protein product [Mus musculus]
Length = 760
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 199/757 (26%), Positives = 342/757 (45%), Gaps = 116/757 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYR-- 120
++ ++Y SRT ++ +VI+E + S Y
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEERRKLLSFYEQQ 97
Query: 121 --PKMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
K+ LG SR+ LCIH EV+ LR G + C L + + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +G+ G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDIHGRQMPLPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE----AKNCIDISSTR 280
+ E + ++++FDEAHN++ +C D+ S +L+ L C S K + I T
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETD 277
Query: 281 RGQSSDE-----------TLNPDNFAILRALLLKLEKRIAEVP--INSKE--LGFTKPG- 324
+ DE ++ + A L +L E VP I + E LGF +
Sbjct: 278 EQRLRDEYRRLVEGLREASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLL 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK-STTACRIESISNILKI--- 380
Y+ L ++ QE+ + + L Q +Q K A R+ S+ + L+I
Sbjct: 338 EYVKWRLRVQHVVQESPPAFL------SGLAQRVCIQRKPLRFCAERLRSLLHTLEIADL 391
Query: 381 -------IFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE- 429
+ + T S Y + + + D + A+ L + C + +A++
Sbjct: 392 ADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTI----ANPVLHFSCMDASLAIKPV 447
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
F R + S+I+TSGTLSP+D + + L + + + I+ G ++
Sbjct: 448 FERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAIS 505
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
S + R+ I + GN ++ ++ +VPDG++ FF SY M+ +A W I E
Sbjct: 506 SKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQG------ILE 559
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
I ++K +E + + +A+E Y ++ GA+ +V RGKVSEG+DF H GRA
Sbjct: 560 NIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLSVARGKVSEGIDFVHHYGRA 617
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V++ G+P+ ++ + EYL Q Q + D+ A R Q V
Sbjct: 618 VIMFGVPYVYTQSRILKARLEYLRDQFQ-------------IRENDFLTFDAMRHAAQCV 664
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
GR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 665 GRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
>gi|145498283|ref|XP_001435129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402259|emb|CAK67732.1| unnamed protein product [Paramecium tetraurelia]
Length = 722
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 204/770 (26%), Positives = 356/770 (46%), Gaps = 116/770 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I ++V FP++ Y QL YM+ + Q+L K + +LE PTGTGKT+ LL +A+
Sbjct: 3 FVIDDLEVIFPYKFLYKEQLEYMQALKQTLDEKGHGILEMPTGTGKTVSLLALIIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS----- 117
L + N + ++Y +RT ++ + ++E++
Sbjct: 60 ------LAQRPNT------------------VKKLIYCTRTVVEMEKTLEEVRLVLKARK 95
Query: 118 ----NYRPKMVILGSREQLCIHREVSLLRGSAQNNACRF----LCKKGTNRRC----NHH 165
N V L SR+ LCI+ +V + + + CR K+G N C N+
Sbjct: 96 AEGLNDNFTAVGLSSRKNLCINPDV-INQKDRVDAECRKRTAEWVKRGQNETCIFYDNYE 154
Query: 166 SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ + N PH + + DL G CPYF RE+ K +IV Y YLIDP
Sbjct: 155 KSGKETIANLPH---DVYSLNDLRKNGAYSIQCPYFTAREMVKKANIVVYNYLYLIDPTV 211
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS 284
L + K S+++FDEAHN++ +C +A + L+ +L +EA N + + T+
Sbjct: 212 SSQLTKDQIKESVVVFDEAHNIDDVCIEAYTVRLNKPIL----AEAINNLKVVETQIQSE 267
Query: 285 SDET---LNPDNFAILRALLLKLEKRIAEVPINSK------ELGFTKPG-PYIYELLADL 334
++E LN + +++ L K E + ++ I + + F K + + L D
Sbjct: 268 TNEIQNRLNEEYKKLIKNLEKKPEGELNQLVIPGQIRKARNFIDFMKRVINSLRKKLKDN 327
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTAC--RIESISNILKIIFRDK-----GT 387
+ +T++ ++ + E +Q++ + S C R+ + N L+I DK
Sbjct: 328 SEALKTSHAILHNTKGFTEEIQKEGNLDIDSLKQCGERLNLLLNTLQIAETDKFRPLSSV 387
Query: 388 AHSAYYRVHVREA------DANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIIL 440
A Y V +E N L K ++ CF+ +AM+ F++ + S+IL
Sbjct: 388 AQFVMYLVQYQEGFKVIFQSNNYEGTLNEKL---MTLACFDSSLAMKNIFAQFQ--SVIL 442
Query: 441 TSGTLSPMDSFAQELKLNFPLRVENPHV-ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIE 499
TSGT+SP++ + + L P+ ++ + +T I IV + G L S + R++ +
Sbjct: 443 TSGTMSPIEIYPKILDFK-PVVAKSIDIELTRNSIQPIIVTMSEDGTELTSEFTLRNNED 501
Query: 500 YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV 559
+ GN ++ ++ VPDGL++F PSY M++ W +IW + K+K +
Sbjct: 502 VSRNYGNFLLELSENVPDGLIVFMPSYSRMEE----W--------ASIWNKFSKNKVLFI 549
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
E + + ++ Y K D GA F++ RGK++EG+DF H GR V + G P
Sbjct: 550 ESKDVAETSQKLQQY-RKCCDVG-RGAALFSIARGKIAEGIDFEGHYGRCVAVIGFPALN 607
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
D + + ++L+ ++K TK F+ + A R Q +GRV+R + DY
Sbjct: 608 SKDTLILERCKFLE-------EKFKITKNDFIEFD------AMRQTCQCLGRVLRGKQDY 654
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHI---QCYSKFGDVVYTLTR-FFRE 725
G +I D+RFA S+ ++ WI + +C + + T+ R FFR+
Sbjct: 655 GIMIMADKRFAQKSKLQKMPRWIYKQLDQSRCLNITSETAITVVRDFFRQ 704
>gi|268570745|ref|XP_002640826.1| Hypothetical protein CBG15713 [Caenorhabditis briggsae]
Length = 755
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 186/756 (24%), Positives = 337/756 (44%), Gaps = 112/756 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q++YM++V ++L + LLE P+GTGKT+ LL L++ S
Sbjct: 5 IDGLKVLFPYDYVYPEQVLYMKEVKKALDANGHGLLEMPSGTGKTVSLLSLVLSYMISYP 64
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPK- 122
+L ++Y SRT ++ + ++E+K +Y K
Sbjct: 65 D---------------------------RLDKLVYCSRTIPEIEKCVEEMKVLYDYWEKE 97
Query: 123 --------MVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRV--ADY 171
V + +R+ LCI+ +V+ LR G+ ++AC+ L + +S + D+
Sbjct: 98 TGVPVAKITVAMSARKNLCINEKVAALRFGNTVDSACQKLTSSSVRAKRQENSEIEGCDF 157
Query: 172 MKNNPHLG----DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
+N G + ++EDL +GR CPYF R IV Y+Y++DP +
Sbjct: 158 FENFEANGFPMQNGVWNLEDLRQLGRERKICPYFTARNAINRAHIVVYSYHYILDPKIAE 217
Query: 228 GLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD 286
+ ++ + S+++FDEAHN++ +C ++ S +S + E +N + + +S+
Sbjct: 218 LVSKDFSRKSVVVFDEAHNIDNVCIESMSVAISQKNADRALQELQNLEQVVGRIKSANSE 277
Query: 287 ETLNPDNFAILRALLLKLEK------RIAEVPINSKELGFTKPGP---------YIYELL 331
+ N + L L + E+ R+A I L PG ++ +
Sbjct: 278 KLQN--EYDKLVEGLKRAERERANDERLANPCIPDDILKEAVPGNIRQANHFLLFLKRFV 335
Query: 332 ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKII-FRDKG---- 386
+ T LI+ + +QE ++ C E ++N+++ + D G
Sbjct: 336 EYVRHRLRTHQVLIESPAAFMKDIQERMCIERRPMRFC-AERLANLVRTLEITDNGDVWA 394
Query: 387 -----------TAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEV 435
+ +S + V V D G T++ C + IA++
Sbjct: 395 LSQVTTMCTLVSTYSKGFSVIVEPQD--------GSQMATITLSCHDASIAIRPVLHRH- 445
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+I+TSGTLSP++ + + L + + + + +V G + S + R
Sbjct: 446 QSVIITSGTLSPLEMYPKILDFDPAVVASFTMTLARPCLAPLVVARGNDQVAMTSRFEQR 505
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ + GN ++ +A +VPDG+++FF SY M+ I W I + + K+K
Sbjct: 506 ADVAVIRNYGNLVLEMASLVPDGMVVFFTSYLYMENVIGVWYEQH------IIDELMKYK 559
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+E + A+E Y+ S GAV F+V RGKVSEG+DF+ H GR V++ G+
Sbjct: 560 LLFIETNDALETSAALEKYVEACD--SGRGAVLFSVARGKVSEGIDFSHHLGRCVIMLGI 617
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF-LSGEDWYNQQASRAVNQAVGRVIR 674
P+ +R + EYL + SF + D+ A R Q +GR +R
Sbjct: 618 PYMYTESRVLRARLEYL--------------RDSFGIRENDFLTFDAMRHTAQCMGRALR 663
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS 710
+ DYG ++F D+RF+ ++ ++ W+Q +++ S
Sbjct: 664 SKTDYGLMVFADKRFSRQDKRGKLPRWMQEYLETAS 699
>gi|392567211|gb|EIW60386.1| DNA repair helicase [Trametes versicolor FP-101664 SS1]
Length = 804
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 193/752 (25%), Positives = 350/752 (46%), Gaps = 97/752 (12%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + LLE P+GTGKT+ LL +++++
Sbjct: 3 FFIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCLLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK 122
+ ++ +V + ++L ++ + H++ + +E + S Y
Sbjct: 63 YPT--------KRKLIYCSRTVPEIEKALAELKRLMDYRKEHAETEEQ-REKEASFYG-- 111
Query: 123 MVILGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKGTNR-----RCNHHSRVADY 171
+ L SR+ LCIH EVS +G + CR L C+KG C+ H +
Sbjct: 112 -IGLTSRKNLCIHPEVSKEKKGKVVDARCRDLTNAAACQKGRENPGSVDLCDWHEELGKL 170
Query: 172 MKNN---PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
N P + + D++ GR CPYF+ R + VD++ ++YL+DP +
Sbjct: 171 EPGNLIPPGIWT----LADVLQHGRDNRVCPYFLVRRMMPFVDVIIYSFHYLLDPKVAEQ 226
Query: 229 LGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC---ISEAKNCID-ISSTRRGQ 283
+ E K++I++FDEAHN++ +C ++ S DL+ +L + + + ID I T +
Sbjct: 227 VSKEITKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVVRLGDKIDEIKKTDASK 286
Query: 284 SSDETL---------NPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PYIYE 329
DE + N A + +L + +P N ++ + F K Y+
Sbjct: 287 LQDEYMRLVEGLQEANDAEDAFVSNPVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKT 346
Query: 330 LLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQNKKSTTAC-RIESISNILKII- 381
+ L++ ET + DI + L+ ++LQ+ T R++ S++ K+
Sbjct: 347 RMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLVRTLEVNRVDEFSSLQKVAS 406
Query: 382 ------FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLE 434
+KGT + + + AA V + C +P IA++ F R
Sbjct: 407 FATLVATYEKGTLYPLAF-----PYETEAATV----PNPIFHLTCLDPAIAIKPVFERF- 456
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
++++TSGTLSP+D + + L+ ++ +T ++ G ++S +
Sbjct: 457 -STVVITSGTLSPLDMYPKMLQFTPVVQETYAMSLTRNSFLPLVITRGSDQVAISSRFEV 515
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+ + G+ ++ ++IVPDG++ FFPSY M+ +A W + G L +W KH
Sbjct: 516 RNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GILNEVW----KH 569
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K VE ++ +A+E+Y + GAV +V RGKVSEG+DF + GRAV++ G
Sbjct: 570 KLIFVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSEGIDFDHNYGRAVIMFG 627
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+ ++ + EYL + + E+ L F A R Q VGRV+R
Sbjct: 628 VPYQYTESRILKARLEYLRDAYRIRESEF----LGF---------DAMRNAAQCVGRVLR 674
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+G ++F D+RFA +++++ WI +I
Sbjct: 675 GKTDWGLMVFADKRFARADKRAKLPRWINQYI 706
>gi|448112560|ref|XP_004202128.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359465117|emb|CCE88822.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 197/759 (25%), Positives = 338/759 (44%), Gaps = 116/759 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP+ + Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPILFPYPKIYPEQYSYMCDIKRTLDVGGNCILEMPSGTGKTISLLSITVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + ++Y SRT S++ + + EL YR
Sbjct: 60 -------------------------QMHYPEHRKVVYCSRTMSEIEKALIELHNLMKYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLL-RGSAQNNACRFLCKKG-------------- 157
+ + L SR+ LC+H +S +G + CR +
Sbjct: 95 EQLGYVEEFRGLGLTSRKNLCLHPSISKEPKGVVVDEKCRRITNGQLKQQIENGKVSEED 154
Query: 158 ------TNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
T + C++H + D M+ + + + L+N + G CPYF R + +
Sbjct: 155 QKRHPETKQLCSYHEELYD-MEQHNLIPAGVYSFDALINYCKARGTCPYFTVRRMIPYCN 213
Query: 212 IVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
I+ Y+YL+DP + + + ++SI+IFDEAHN++ +C ++ S DL+ L A
Sbjct: 214 IIIYSYHYLLDPKIAERVSKDISRDSIIIFDEAHNIDNVCIESLSLDLTDDTLQRATRGA 273
Query: 271 KNCIDISSTRRGQSSDETLNPDNFAI--LRALLLKLEKRI-AEVPINSKEL------GFT 321
D + Q S++ N + LR ++ E+ + PI K+L G
Sbjct: 274 TKLGDAIDDMKSQDSEKLQNEYEKLVEGLRQSEIEREEELFMSNPILPKDLLDEAVPGNI 333
Query: 322 KPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESIS 375
+ G + L +T K++ ++ E LQ K ++K C R+ +
Sbjct: 334 RKGEHFISFLKRFIEYLKTRMKVLHVISETPTSFLQHLKDLTFIDRKPLRFCSERLSLLV 393
Query: 376 NILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIA 426
L++ + TA A + V + +L+ + L + C + IA
Sbjct: 394 RTLELTEIEDFTALKDIATFATLVSTYETGFQLILEPFETEGSSVPNPILHFTCLDASIA 453
Query: 427 MQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGP 483
++ F R S+I+TSGT+SP+D + + LNF ++ + IT + IV G
Sbjct: 454 IKPVFDRF--SSVIITSGTISPLDMYPR--MLNFQTVIQESYTITLARRSFLPMIVTKGA 509
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
++S + R+ + G+ ++ ++I PDG+++FFPSY M+ I+ W+N G
Sbjct: 510 DQVSISSRFEIRNDPSVVRNYGSLLIEFSKITPDGMVVFFPSYLYMESIISMWQNM--GV 567
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
L +W K+K +VE + LA+E + ++ GAV +V RGKVSEG+DF
Sbjct: 568 LDEVW----KYKLILVETPDAQETSLALETFRKAC--SNGRGAVLLSVARGKVSEGIDFD 621
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
H GR V++ G+PF ++ + E+L Q + ++ LSF A R
Sbjct: 622 HHYGRTVLMIGIPFQYTESRILKARLEFLRDHFQIRENDF----LSF---------DAMR 668
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RF+ +KSQ+ WI
Sbjct: 669 HAAQCLGRVLRGKDDYGIMVLADRRFSR--KKSQLPKWI 705
>gi|320591639|gb|EFX04078.1| dead domain containing protein [Grosmannia clavigera kw1407]
Length = 911
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 191/696 (27%), Positives = 318/696 (45%), Gaps = 109/696 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--------RP----------------KMVILGSREQL 132
I Y SRTHSQL Q I EL+ + +P + + L SR++L
Sbjct: 254 IYYASRTHSQLTQFIAELRRPTFPSSLPDFSQPDKEIDGVAAAAVDEPIRHIPLSSRQRL 313
Query: 133 CIHREVSLLRGS--AQNNACRFLCKK-------------GTNRRCNHHSRVADYMKNNPH 177
CI+ V+ L GS A N+ C L K G + +RVA+ +
Sbjct: 314 CINPAVARL-GSVGAINDRCAELQKPKKKTKTDDGKKIPGCPFAPSAENRVAERQFRDAA 372
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTR---ELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
L P DIEDL +G CPY+ +R E +IV PY L+ R+ LG+ +
Sbjct: 373 LATLP-DIEDLFRLGTELHVCPYYGSRRAAEAGGGAEIVTLPYPLLLHKAAREALGIRLE 431
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNF 294
NS++I DEAHN+ D +G+ A + + + R G+ L D
Sbjct: 432 NSVVIVDEAHNI---------MDAVAGVHAAAL------LAVYVRRFGRR----LRGDGR 472
Query: 295 AILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAEL 354
++ L ++ A + + ++ ++EL+ + T + A+K VE
Sbjct: 473 VMVGQLGRVIQGLSAWMEGGADQIN-------LFELVQYIQ-TSKLAFK----VESYGAY 520
Query: 355 LQEDKLQNKK----------STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANA 404
++E+ +N+K + + ++ + L + G Y R+ + A A
Sbjct: 521 VEEEAEKNQKVQKTENDAHNAHNPPVLHTLVSFLLALTNLSGEGRIFYERLPLVSPGA-A 579
Query: 405 ADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-KLNFPLRV 463
DV LS+ +P A + ++IL GT++P + L + P R+
Sbjct: 580 PDV-------KLSYLLLSPTHAFSSIA-ASARAVILAGGTMAPFSDYRCHLFPSHAPERI 631
Query: 464 EN---PHVITSKQ--IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
HVI +W + + PS L+ S++ R + ++LG ++N+ +VPDG
Sbjct: 632 TTLSCGHVIPPSNLCVWT-LAFISPSSPPLDFSFQKRSLAQTIRDLGAAMLNLCAVVPDG 690
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
+++FFPSY +D+ +A WK G T++W+R+C K +E R ++ + DY +
Sbjct: 691 VVVFFPSYGYLDEVVAAWKTAGPGA-TSLWDRLCARKTVFLETRGAASSDDVLADYSRAI 749
Query: 579 --KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
++ + GA+ F+V GK+SEG++FAD GR VVI G+PF P + + +Y++ A
Sbjct: 750 LGEEPKSQGALLFSVVGGKMSEGINFADRLGRCVVIVGLPFPNPHAPDWKARMQYIEATA 809
Query: 637 QSQGGEYKETKLSFLS--GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
+ ++ + D+Y RAVNQ++GR IRHR DY AII D RFA P
Sbjct: 810 RDANSNSSDSTSLSPAQQARDFYENACMRAVNQSIGRAIRHRADYAAIILADHRFATPRI 869
Query: 695 KSQISLWIQPHIQCYSK---FGDVVYTLTRFFREER 727
++++ WI+ + S+ +V TL FFR ++
Sbjct: 870 RNKLPAWIRDGMVAASEDRGLSAMVTTLGGFFRGKK 905
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN--ALLESPTGTGKTLCLLCATLAW 59
P+ YD Q+ +M V + A+LESPTGTGK+L L+C L W
Sbjct: 38 PYTPYDVQMDFMRAVYDACATGGGQVAILESPTGTGKSLSLICGALTW 85
>gi|452002470|gb|EMD94928.1| hypothetical protein COCHEDRAFT_1168302 [Cochliobolus
heterostrophus C5]
Length = 1449
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 195/709 (27%), Positives = 319/709 (44%), Gaps = 97/709 (13%)
Query: 60 RKSLGSF--STLGSQVNNQISGSQSSVNSSQSGDSKLP---TILYTSRTHSQLRQVIQEL 114
R G+F S L ++ ++ + ++ ++ D ++P I + SRTHSQL Q EL
Sbjct: 160 RARGGTFNESGLSAETQALMASLGYTDDAPKNDDGEVPDETKIFFCSRTHSQLTQFSSEL 219
Query: 115 KTSNYRP--------------------KMVILGSREQLCIHREVSLL-RGSAQNNACRFL 153
P K + LGSR+ LCI+ +V+ L +A N C L
Sbjct: 220 GRVKMPPAIALDDDTNGADIDSLVEDVKHLTLGSRKNLCINGKVNKLGSATAINERCLEL 279
Query: 154 CKKGT-NRRCNHH-SRVADYMKNN--PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKT 209
+ + RC H S+ + + N+ H + DIEDL +G+ G CPY+ +R K
Sbjct: 280 QQNSSAESRCPHMPSKEQEPLINDFRDHALAKIRDIEDLGLLGKKLGVCPYYASRPATKY 339
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSG-------L 262
+IV PY L+ R+ LG+ K+ ++I DEAHNL A S ++ G
Sbjct: 340 CEIVTLPYPLLLQRTAREALGLSLKDHVVIIDEAHNLMDAIAGIYSVSVTLGQVQQARAQ 399
Query: 263 LTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK 322
LTA + + +N + + + IL ++L L+ A+
Sbjct: 400 LTAYLQKFRNKL--------KGKNRVYVAQTVRILDSILAYLQSIDAD------------ 439
Query: 323 PGPYIYELLADL-NITQETAYKLIDIVEVAAELLQEDKLQNK-KSTTACRIESISNILKI 380
P + L D+ +I I++ ++ A LQE +L K TA +++ K
Sbjct: 440 --PKATDGLVDMVSIMSGKGVDQINVFKLNA-YLQESRLARKVDGYTAYAEQTVDEPTKQ 496
Query: 381 IFRDKGTAHSAYYRVHVRE-----ADANAADVL---KGKASRTLSWWCFNPGIAMQEFSR 432
+ + KG HS +HV+ + +A K TL + +P ++
Sbjct: 497 VSK-KGPRHSVPVLMHVQAFLLSLMNPSAEGRFFYSKEDGVTTLRYMLLDPTFHFKDVVE 555
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNF--PLRVEN---PHVITSKQIWAGIVPVGPSGYL 487
E +++L GT+SPM + Q L L++ P +++ HVI + A V SG
Sbjct: 556 -EARAVVLAGGTMSPMSDYEQHL-LSYLEPSKIKTLSCGHVIPPSNLLAVPVVRATSGAE 613
Query: 488 LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL-TT 546
+ ++ NR+ + +LG I AR +PDG+++FFPSY +D CIA WK TT
Sbjct: 614 FDFTFDNRNKEKTIIDLGAAISGFARDIPDGVVVFFPSYSYLDTCIAAWKRLKPAQSNTT 673
Query: 547 IWERICKHKKPVVEPR--------QSSLFPLAIED----YMAKLKDTSTSGAVFFAVCRG 594
W+ K +E R S++ A++ Y A + + GA+ FAV G
Sbjct: 674 FWDAFKSSKPVFLEQRSQQQNLDASSAVKEAAVDSVLNAYSAAIASGNGRGALLFAVIGG 733
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
+SEG++F+D GR VV+ G+PF + + K +Y+ + GG+ K +
Sbjct: 734 TLSEGINFSDALGRGVVVVGLPFPNAHSAEWKAKMQYIAAKEAKHGGDGKA------AAR 787
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
++Y R+VNQ VGR IRH+ DY AI+ D R+ + ++ WI+
Sbjct: 788 EFYENACMRSVNQCVGRAIRHKGDYAAILMLDRRYGSKRIQDKLPRWIR 836
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
D P+ YD Q +M V + L+N + ESPTGTGK+L L+C +L W +
Sbjct: 9 DFHHPYTPYDIQNEFMGAVYECLENGQVGIFESPTGTGKSLSLICGSLTWLR 60
>gi|206558115|sp|A2QY22.1|CHL1_ASPNC RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|134079766|emb|CAK40902.1| unnamed protein product [Aspergillus niger]
Length = 874
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 197/704 (27%), Positives = 304/704 (43%), Gaps = 94/704 (13%)
Query: 87 SQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY---------------------RPKMVI 125
S D+ I Y SRTHSQL Q EL+ R K V
Sbjct: 193 SDDADNDEVKIFYCSRTHSQLTQFAGELRRVKMPWSIPKDLLSTDLTGEEELEERVKHVT 252
Query: 126 LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTN--RRCNHHSRVAD---YMKNNPHLG 179
LGSR+ LCI+ VS L +A N C L + N RC D ++ H
Sbjct: 253 LGSRKNLCINPRVSSLENATAINERCLDLQQPNVNPQHRCPFLPSKEDERQVLQFRDHAL 312
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQK-----------TVD-------IVFAPYNYLI 221
DIEDL +G+ G CPY+ +R + K ++D IV PY L+
Sbjct: 313 STVKDIEDLGKLGKKIGICPYYASRSVVKDSEVCCLRARSSIDLVPDEWQIVTLPYPLLL 372
Query: 222 DPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
R+ L K ++I DEAHNL ++ S ++ L +S+ T
Sbjct: 373 QRSAREALNSSVKGHVIIIDEAHNLMDAISNIHSVTVTLSQLQTSLSQL--------TIY 424
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGP-YIYELLADLNITQET 340
G+ L N + + A +++L IA + E G GP I EL++ + Q
Sbjct: 425 GRKFKTRLKGKNRSYV-AQVIRLLSSIAAHLRSLLESGKAPEGPVLISELMSGKGVDQIN 483
Query: 341 AYKLIDIVEVAAELLQEDKLQNK-------KSTTACRIESISNILKIIFRDKGTAHSAYY 393
YKL + LQE KL K + + S S + ++F +G S
Sbjct: 484 PYKL-------SRYLQESKLARKVDGYVEFTRDPSDKQASRSPTVPVLFHIQGFLLSLM- 535
Query: 394 RVHVREADANAADVL---KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDS 450
+ +A L K + L + +P +E + +IIL GT+SPM
Sbjct: 536 -------NPSAEGRLFYSKEQGDIQLKYMLLDPTNQFRELVE-DARAIILAGGTMSPMTD 587
Query: 451 FAQELKLNFPL-RVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGN 506
+ L P R++ HVI + + A + G G + +Y RDS + +LG
Sbjct: 588 YMNHLFSYVPASRLDTFSYGHVIPPENLIAHTLVRGVQGSEFDFTYDARDSEKMIMDLGR 647
Query: 507 TIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL 566
TI + ++PDG++ FFPSY + + + WK G + KKP++ +S
Sbjct: 648 TIATLCHVIPDGVVAFFPSYDYLGRVLNIWKKPMLGEQGQTVYNLIGQKKPILS--ESRD 705
Query: 567 FPLAIEDYMAKLKDT--STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+ E+ + +T S GA+ +V GK+SEG++F+D GR V+I G+PF +
Sbjct: 706 MTVTTEELLHTYANTVDSGRGALLLSVVGGKLSEGINFSDKLGRGVLIVGLPFPNIRSAV 765
Query: 625 VRLKREYLDLQA--QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
+ K +Y++ + Q+ G E + +G D+Y RAVNQ +GR IRHR+DY AI
Sbjct: 766 WQAKIQYIEQKTHQQATGSEASRQLAAKAAGRDFYENSCMRAVNQCIGRAIRHRNDYAAI 825
Query: 683 IFCDERFAHPSRKSQISLWIQPHIQCYS---KFGDVVYTLTRFF 723
+ D R+ P ++++ WI+ + S G V +L +FF
Sbjct: 826 VLVDRRYEKPGIQAKLPAWIKQSMVGSSVQRPAGATVQSLAKFF 869
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D P+ YD QL M + L+ A+ ESPTGTGK+L L+C +L W
Sbjct: 7 DFHHPYSPYDIQLQLMRALYSCLEQGKVAVFESPTGTGKSLSLICGSLTW 56
>gi|448115115|ref|XP_004202752.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359383620|emb|CCE79536.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 198/759 (26%), Positives = 337/759 (44%), Gaps = 116/759 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP+ + Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPILFPYPKIYPEQYSYMCDIKRTLDVGGNCILEMPSGTGKTISLLSITVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + ++Y SRT S++ + + EL YR
Sbjct: 60 -------------------------QMHYPEHRKVVYCSRTMSEIEKALIELHNLMKYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLL-RGSAQNNACRFLCKKG-------------- 157
+ + L SR+ LC+H VS +G + CR +
Sbjct: 95 EQLGYVEEFRGLGLTSRKNLCLHPSVSKEPKGVVVDEKCRRITNGQLKQQIENGKVSEED 154
Query: 158 ------TNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
T + C++H + D M+ + + + L N + G CPYF R + +
Sbjct: 155 QKRHPETKQLCSYHEELND-MEQHNLIPAGVYSFDALTNYCKARGTCPYFTVRRMIPYCN 213
Query: 212 IVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
I+ Y+YL+DP + + + ++SI+IFDEAHN++ +C ++ S DL+ L A
Sbjct: 214 IIIYSYHYLLDPKIAERVSKDISRDSIIIFDEAHNIDNVCIESLSLDLTDDTLQRATRGA 273
Query: 271 KNCIDISSTRRGQSSDETLNPDNFAI--LRALLLKLEKRI-AEVPINSKEL------GFT 321
D + Q S++ N + LR ++ E+ + PI K+L G
Sbjct: 274 TKLGDAIDDMKSQDSEKLQNEYEKLVEGLRQSEIEREEELFMSNPILPKDLLDEAVPGNI 333
Query: 322 KPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESIS 375
+ G + L +T K++ ++ E LQ K ++K C R+ +
Sbjct: 334 RKGEHFISFLKRFIEYLKTRMKVLHVISETPTSFLQHLKDLTFIDRKPLRFCSERLSLLV 393
Query: 376 NILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIA 426
L++ + TA A + V + +L+ + L + C + IA
Sbjct: 394 RTLELTEIEDFTALKDIATFATLVSTYETGFQLILEPFETEGSSVPNPILHFTCLDASIA 453
Query: 427 MQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGP 483
++ F R S+I+TSGT+SP+D + + LNF ++ + IT + IV G
Sbjct: 454 IKPVFDRF--SSVIITSGTISPLDMYPR--MLNFQTVIQESYTITLARRSFLPMIVTKGA 509
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
++S + R+ + G+ ++ ++I PDG+++FFPSY M+ I+ W+N G
Sbjct: 510 DQVSISSRFEIRNDPSVVRNYGSLVIEFSKITPDGMVVFFPSYLYMESIISMWQNM--GV 567
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
L +W K+K +VE + LA+E + ++ GAV +V RGKVSEG+DF
Sbjct: 568 LDEVW----KYKLILVETPDAQETSLALETFRKAC--SNGRGAVLLSVARGKVSEGIDFD 621
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
H GR V++ G+PF ++ + E+L Q + ++ LSF A R
Sbjct: 622 HHYGRTVLMIGIPFQYTESRILKARLEFLRDHFQIRENDF----LSF---------DAMR 668
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RF+ +KSQ+ WI
Sbjct: 669 HAAQCLGRVLRGKDDYGIMVLADRRFSR--KKSQLPKWI 705
>gi|395333451|gb|EJF65828.1| DNA repair helicase [Dichomitus squalens LYAD-421 SS1]
Length = 796
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 191/746 (25%), Positives = 349/746 (46%), Gaps = 86/746 (11%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + LLE P+GTGKT+ LL +++++
Sbjct: 3 FFIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCLLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK 122
+ ++ +V + S+L ++ R ++ + Q K N+
Sbjct: 63 YPT--------KRKLIYCSRTVPEIEKALSELQRLMDYRRDCAETDE--QREKEKNFYG- 111
Query: 123 MVILGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKGTN-----RRCNHHSRVADY 171
+ L SR+ LCIH EVS +G + CR L C KG C+ H +
Sbjct: 112 -IGLTSRKNLCIHPEVSKEKKGKVVDARCRDLTNSAVCTKGRENPGSVELCDWHENLGKL 170
Query: 172 MKNN---PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
N P + + D++ GR CPYF+ R + VD++ ++YL+DP +
Sbjct: 171 EPGNLIPPGIWT----LADVLQHGRENKICPYFLVRRMMPFVDVIIYSFHYLLDPKVAEQ 226
Query: 229 LGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC---ISEAKNCID-ISSTRRGQ 283
+ E K++I++FDEAHN++ +C ++ S DL+ +L + + + + ID I T +
Sbjct: 227 VSKELTKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVVKLGDKIDEIKKTDASK 286
Query: 284 SSDE---------TLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PYIYE 329
DE + D A + +L + +P N ++ + F K Y+
Sbjct: 287 LQDEYAKLVEGLQEASNDEDAFVSNPVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKT 346
Query: 330 LLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQN-KKSTTACRIESISNILKII- 381
+ L++ ET + DI + L+ ++LQ+ ++ R++ +S++ K+
Sbjct: 347 RMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLVRTLELSRLDELSSLQKVAS 406
Query: 382 FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIIL 440
F + + + + + + A V + C +P IA++ F R S+++
Sbjct: 407 FATLVATYEKGFLLILEPFETDNATV----PNPIFHLTCLDPSIAIKPVFERF--SSVVI 460
Query: 441 TSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY 500
TSGTLSP+D + + L+ ++ +T ++ G ++S + R+
Sbjct: 461 TSGTLSPLDMYPKMLQFTPVVQETYSMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAV 520
Query: 501 KQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVE 560
+ G+ ++ ++IVPDG++ FFPSY M+ +A W + G L +W KHK VE
Sbjct: 521 VRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GILNEVW----KHKLIFVE 574
Query: 561 PRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
++ +A+E+Y + GAV +V RGKVSEG+DF + GRAV++ G+P+
Sbjct: 575 TPDANETSIALENYRRACDN--GRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYT 632
Query: 621 TDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
++ + EYL + + E+ L F A R Q VGRV+R + D+G
Sbjct: 633 ESRILKARLEYLRDAYRIRESEF----LGF---------DAMRNAAQCVGRVLRGKTDWG 679
Query: 681 AIIFCDERFAHPSRKSQISLWIQPHI 706
++F D+RFA +++++ WI +I
Sbjct: 680 LMVFADKRFARADKRAKLPRWINQYI 705
>gi|392595870|gb|EIW85193.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 787
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 198/780 (25%), Positives = 361/780 (46%), Gaps = 117/780 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL ++++
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ-- 60
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
Q N + ++Y SRT ++ + + ELK YR
Sbjct: 61 ------------------QFYPNKRK--------LIYCSRTVPEIEKALAELKRLMEYRI 94
Query: 122 KMVI---------------LGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKG--- 157
K L SR+ LCIH EV+ +G + CR L C KG
Sbjct: 95 KCAETTEQKEKEENFRGLGLTSRKNLCIHPEVAKEKKGKVVDARCRDLTNSAVCAKGRED 154
Query: 158 --TNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFA 215
+ C H + ++ + + D++ GR G CPYF R + VD+V
Sbjct: 155 PGSVELCEWHENLGK-LEPGSLISPGVHTLADVLEHGRANGTCPYFTVRRMMPFVDVVIY 213
Query: 216 PYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL-TACISEAKNC 273
++YL+DP + + E K++I++FDEAHN++ +C ++ S DL+ +L +A S K
Sbjct: 214 SFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVVKLG 273
Query: 274 IDISSTRRGQSS-------------DETLNPDNFAILRALLLKLEKRIAEVPINSKE--- 317
I +R ++ E P+ + + +L + +P N ++
Sbjct: 274 DKIEEIKRTDAAKLQDEYARLVEGLQEPAAPEEDSFMSNPVLPEDLLSEAIPGNIRKAEH 333
Query: 318 -LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQNK-KSTTA 368
+ F K Y+ + L++ ET + DI + L+ ++LQ+ ++
Sbjct: 334 FVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSMIRTLEL 393
Query: 369 CRIESISNILKII-FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAM 427
R++ S++ K+ F + + + + + ++A V + + C +P +A+
Sbjct: 394 SRLDEYSSLQKVASFATLVATYEKGFLLILEPFETDSATV----PNPMFHFTCLDPSLAI 449
Query: 428 QE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPV-GPSG 485
+ F R S+++TSGT+SP+D + + L+ P+ E+ + ++ + +V G
Sbjct: 450 KPVFERF--SSVVITSGTISPLDMYPKMLQFT-PVVQESYSMTLARNTFLPLVITRGSDQ 506
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
++S + R+ + G+ ++ ++IVPDG++ FFPSY M+ +A W + G LT
Sbjct: 507 VAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GILT 564
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
+W K+K VE ++ +A+E+Y + GAV +V RGKVSEG+DF +
Sbjct: 565 EVW----KNKLIFVETPDANETSIALENYRRACDNGR--GAVLLSVARGKVSEGIDFDHN 618
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
GRAV++ G+P+ ++ + EYL + + E+ L F A R
Sbjct: 619 YGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LGF---------DAMRNA 665
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYTLTRFF 723
Q VGRV+R + D+G ++F D+RFA +++++ WI +I + S D+ TL++ F
Sbjct: 666 AQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITEVASNLSTDMAITLSKLF 725
>gi|322694417|gb|EFY86247.1| DEAD-2 domain-containing protein [Metarhizium acridum CQMa 102]
Length = 891
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 187/689 (27%), Positives = 308/689 (44%), Gaps = 105/689 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY-----------------RPKMVILGSREQLCIHREVS 139
I YTSRTHSQL Q I EL+ + K++ L SR++LCI+ V+
Sbjct: 212 IYYTSRTHSQLSQFITELRRPKFPSSLPTSLAEEKSSVQETVKLLPLSSRQRLCINPSVA 271
Query: 140 LLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGR 193
L GS Q N+ C L + + ++C++ + + + D + DIEDL +G+
Sbjct: 272 RL-GSVQAINDRCAELQQSKSTKKCSYVPK-EELLSQTHQFRDSALATVPDIEDLHQLGK 329
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD- 252
+ CPY+ +R +I+ PY L+ R+ LG++ + +++I DEAHN+ A+
Sbjct: 330 SLAVCPYYASRSALPGAEIITLPYPLLLQRSAREALGIKLEGNVVIIDEAHNVMDAVANV 389
Query: 253 -AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
AA LS + + + + + R G+ + +N N R+ V
Sbjct: 390 HAAEIKLSD------LQKGRGMLGVYVKRFGKKL-KGVNRVNVG-----------RVGRV 431
Query: 312 PINSKELGFTKPGPYIYELLADLN-ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR 370
E G + D N +T+ I++ E+ + +QE KL K + A
Sbjct: 432 IDGLTEWMNGAKGFKQQHGIVDANDLTRPKGIDQINMFELI-QYIQESKLAYKIESYAAH 490
Query: 371 IESISNILK-------------IIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
+ES ++ K + F T S R+ ++ DV LS
Sbjct: 491 VESENSSGKPATKSSTPVLHTLVSFLAALTNPSTEGRIFYQKTSGPVQDV-------QLS 543
Query: 418 WWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLRVENP-------HV 468
+ +P A FS + ++IL GT+SP D + L FP + HV
Sbjct: 544 YLLLSPTHA---FSSIVSSARAVILAGGTMSPFDDYKNHL---FPALADAKVTTLSCGHV 597
Query: 469 ITSKQIWA-GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
I + + + P G SY+ R E +ELG I+NI +VPDG+++FFPSY
Sbjct: 598 IPRENLCVCTLTGTRPGGSSFEFSYQRRGDQEMVKELGLAILNICSLVPDGVVVFFPSYG 657
Query: 528 LMDQCIACWKNTSHGN---LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS 584
+++ +A W + G+ TTIW+R+ K E + S + E A L + +
Sbjct: 658 YLEEVVAVWSRRALGDKNPQTTIWDRLQTRKMVFRETKGCSSDEVLQEYTQAILGNGGRT 717
Query: 585 --------GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD--- 633
GA+ +V GK+SEG++F+D GR V++ G+P+ + P+ + + EY++
Sbjct: 718 TGMVKGKGGALLLSVVGGKMSEGINFSDRLGRCVMVVGLPYPNIASPEWKARMEYIESTT 777
Query: 634 ---LQAQSQGGEYKETK-----LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFC 685
LQ K TK + + D+Y RAVNQ++GR IRH+ DY AI+
Sbjct: 778 LENLQDSVNVAGSKLTKDEAAARAKQAARDFYENACMRAVNQSIGRAIRHKGDYAAIVLA 837
Query: 686 DERFAHPSRKSQISLWIQPHIQCYSKFGD 714
D R+A + ++ WI+ ++ GD
Sbjct: 838 DRRYATERIQGKLPGWIRSGMEARGSGGD 866
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCN--ALLESPTGT-GKTLCLLCATLAW 59
T + +D P+ Y Q +M V L +LESPTGT GK+L L+CA+L W
Sbjct: 13 TRHLEKLDFHHPYTPYAVQEQFMRTVYDILDKGEGQVGILESPTGTKGKSLSLICASLTW 72
Query: 60 RKSLGS 65
++ S
Sbjct: 73 LRNFKS 78
>gi|429854790|gb|ELA29777.1| ATP-dependent RNA helicase chl1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 858
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 194/715 (27%), Positives = 319/715 (44%), Gaps = 113/715 (15%)
Query: 97 ILYTSRTHSQLRQVIQELK----------------TSNYRP-----KMVILGSREQLCIH 135
I YTSRTHSQL Q I EL+ + + RP K + L SR++LCI+
Sbjct: 177 IYYTSRTHSQLTQFIHELRRPAFPSSMPPSVKPNDSEDARPDKEPVKHLPLSSRQKLCIN 236
Query: 136 REVSLLRG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP----IDIEDLVN 190
V+ L SA N+ C L K +C ++ D +K D DIEDL +
Sbjct: 237 PSVAKLGTISAINDRCSELQKPKAKDKC-PYTLNEDNIKQTHQFRDTAHATLPDIEDLYH 295
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ +R +I+ PY L+ R LG++ + +++I DEAHN+
Sbjct: 296 LGKKLEVCPYYASRAAIAGAEIITLPYPLLLQKNARDALGIKLEGNVVIVDEAHNI---- 351
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAE 310
DA + +S + + A+ + + R G+ L +N ++ + R+ E
Sbjct: 352 MDAVANVYASEIKLTELRRARQMLGVYVKRFGKK----LKGENRVMVGQV-----GRVIE 402
Query: 311 VPINSKELGFTKPGPY-IYE---LLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKST 366
T P+ I + LL + Q +KLI + +QE KL K +
Sbjct: 403 GLTEWMSGAMTLKAPHGIVDSKVLLRCKGVDQINLFKLI-------QYIQESKLAYKIES 455
Query: 367 TACRIE--------------SISNILKII--FRDKGTAHSAYYRVHVREADANAADVLKG 410
+E S + +L I+ F T S+ R+ + +N+ D+
Sbjct: 456 YVAHVEEEIAQANAGKAPPRSSTPVLHILSSFLISLTNLSSEGRIFYEKTSSNSPDI--- 512
Query: 411 KASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP---- 466
LS+ +P A + ++IL GT+SP + + L FP ++
Sbjct: 513 ----QLSYLLLSPTHAFSSIA-TSARAVILAGGTMSPFEDYKDHL---FPYLSDSKLTTL 564
Query: 467 ---HVITSKQ--IW--AGIVPVGPSGYLLNS---SYRNRDSIEYKQELGNTIVNIARIVP 516
HVI +W AG P GP+ + ++ S++ R +LG I+NI +VP
Sbjct: 565 SCGHVIPPSNLCVWTLAGTKP-GPNRDVSSTFEFSFQRRSDKTMVSQLGLAILNICNVVP 623
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
DG+++FFPSY +D+ +A W+ S G +IW+R+ + K+ E R S + A
Sbjct: 624 DGVVVFFPSYGYLDEVVAVWETKSPGESKSIWDRMRERKEAFKETRGGSSDEVLEAYSKA 683
Query: 577 KLKDTS--------TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
L D GA+ +V GK+SEG++F+D GR V+I G+P+ + P+ + K
Sbjct: 684 ILGDGEPCAGAAPKPRGAILLSVVGGKMSEGINFSDRLGRCVIIIGLPYPNINSPEWKAK 743
Query: 629 REYL---------DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
EY+ D A ++ + ++ + D+Y RAVNQ++GR IRH+ DY
Sbjct: 744 TEYIETTTVQRLTDASASTRISREEAIVVAKQAARDFYENACMRAVNQSIGRAIRHQGDY 803
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSK---FGDVVYTLTRFFREERICGS 731
AI+ D R+ + ++ WI+ + S ++ L+ FFR +R S
Sbjct: 804 AAIVLVDRRYGTDRIRGKLPGWIRGGMNNDSHEKGLPQLMGALSGFFRSKRKSAS 858
>gi|303289303|ref|XP_003063939.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454255|gb|EEH51561.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 770
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 203/811 (25%), Positives = 326/811 (40%), Gaps = 176/811 (21%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR--KSLGSFSTLGSQVNNQISGS-- 80
M + L+ + ESPTGTGKTL LCA L W ++ G L + + +G+
Sbjct: 1 MRSLYDVLRRGGIGIFESPTGTGKTLSTLCAALQWLEVRARGEAEFLADEWRDDAAGNPN 60
Query: 81 -----------------------------QSSVNSSQSG---------DSKLPT-ILYTS 101
+ N + +G D+ PT +++ S
Sbjct: 61 PDDDVFRGARADDSSSDDDGDDPNGNTKRRGKRNGAGAGPADGDSSDEDAAAPTQVIFCS 120
Query: 102 RTHSQLRQVIQELKTSNYRP-----KMVILGSREQLCIHREVSLLRGSAQNNA------- 149
RTHSQL QV+ EL ++++ + + SR QLC++ EV R +NA
Sbjct: 121 RTHSQLTQVVGELNSTSFGGPEGTVNAIAIASRAQLCVNPEV---RSVGVSNARLNERCL 177
Query: 150 -------------------------------CRFLCKKGTNRRCNHHSRVADYMKNNPHL 178
C FL NRR +
Sbjct: 178 ELGKPTTTKSSSSATATDPATGKKKKKTAGGCPFL----KNRRAAVAELADAALS----- 228
Query: 179 GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSIL 238
+P+DIEDL +G CPY+ R D+VFAPY L+ R+ LG+ K +++
Sbjct: 229 --QPMDIEDLAALGVRRRACPYYAARRALPRADLVFAPYASLLHAETRESLGINLKGAVV 286
Query: 239 IFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILR 298
+FDEAHNL+ A ++T +A + ++ R N + L
Sbjct: 287 VFDEAHNLQ-----EAVHGAYGAVITGSQIKAVKAMLVAYVERFHKRLAAGNLRHLRTLI 341
Query: 299 ALLLKLEKRI--AEVPINSKELGFTKPGP---------------YIYELLADLNITQETA 341
+L +EK + + + N++ +G T +++ + AD N+
Sbjct: 342 SLAKSMEKALDPSMMHHNARNVGVTGSSSGARTSSGSEIKCLNDFLFGVGAD-NVNVFAL 400
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREAD 401
K + ++A ++ + +N+ + R+ ++ + F + A RV V A
Sbjct: 401 TKYLRESKIAHKIAGYAESRNESTKRPPRVGAVHALAA--FVSALASSDADGRVLVERAG 458
Query: 402 A-NAAD--VLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELK 456
A AD +G L + + A F + E +++L GTLSP+D A+ L
Sbjct: 459 AVGGADQGADQGADGGRLKFVLLD---AAARFKSVVDESRAVVLVGGTLSPIDELARAL- 514
Query: 457 LNFPL---------------RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
FP + HV+ + + V GP G + S+ RD+ +
Sbjct: 515 --FPSAAPVGSKIASETTLSSLSLGHVVPKESLLPIAVGKGPGGVRFDFSFGKRDAFDVV 572
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEP 561
ELG ++N + + P G+++FFPS+ D W T ++ KHK EP
Sbjct: 573 DELGRLLINASAVTPGGVVVFFPSFKYADDVYQRWVRTG------AVGQLAKHKAVFREP 626
Query: 562 RQ--------SSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
R+ S P A +GAV VC GK+SEG++F D GR V++
Sbjct: 627 RKARSPIHTGSRTTPSACNPKGGGG--GGQTGAVMLCVCGGKLSEGINFKDDLGRLVIMV 684
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+A DP++ + ++LD L G +Y R+VNQ+VGR I
Sbjct: 685 GLPYANPDDPELSARMKHLD--------AMDAATLDVPRGRAYYEALCMRSVNQSVGRAI 736
Query: 674 RHRHDYGAIIFCDERFAHPSRKS-QISLWIQ 703
RH DY AI+F D R+ +P S Q+ WI+
Sbjct: 737 RHARDYAAILFADHRYVNPDGASAQLPGWIR 767
>gi|344299882|gb|EGW30235.1| DNA helicase component of transcription factor b [Spathaspora
passalidarum NRRL Y-27907]
Length = 792
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 202/758 (26%), Positives = 333/758 (43%), Gaps = 114/758 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FFIDDLPVLFPYPKIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K YR
Sbjct: 60 -------------------------QMHYPEQRKIVYCSRTMSEIEKALIELYKLMEYRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVADY 171
+ + L SR+ LC+H +S R G + CR + +
Sbjct: 95 NELGYVEDFRGLGLTSRKNLCLHPTISKERKGVVVDEKCRRITNGQLKNKIEKGMISEQQ 154
Query: 172 MKNNP--------HLGDEPIDIEDLVNIG-----------RTFGPCPYFMTRELQKTVDI 212
+NP H E +D DL+ G + G CPYF R + +I
Sbjct: 155 QADNPEVNSLCSFHENLEDMDQHDLIPPGVYSFDGLLKYCKQRGTCPYFTVRRMMPFCNI 214
Query: 213 VFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
+ Y+YL+DP + E K+SI+IFDEAHN++ +C ++ S DL+ L A
Sbjct: 215 IIYSYHYLLDPKIADRVSKELSKDSIVIFDEAHNIDNVCIESLSLDLTEDTLKRATRGAN 274
Query: 272 NCIDISSTRRGQSSDETLNPDNFAI--LR-ALLLKLEKRIAEVPINSKEL------GFTK 322
D + Q S++ N + LR A + + E+ PI ++L G +
Sbjct: 275 KLGDAIEEMKAQDSEKLQNEYEQLVEGLRQAEIARNEELFMSNPILPQDLLDEAIPGNIR 334
Query: 323 PGPYIYELLADLNITQETAYKLIDIVEVAA----ELLQEDKLQNKKSTTAC--RIESISN 376
G + L +T K++ ++ + L+E ++K C R+ +
Sbjct: 335 KGEHFIAFLKRFIEYLKTRMKVLHVISETPISFLKHLKELTYIDRKPLRFCSERLSLLVR 394
Query: 377 ILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIAM 427
L++ + A A + V D +L+ + L + C + IA+
Sbjct: 395 TLELAEIEDFNALKDIATFATLVSTYDTGFQLILEPYETEGSSVPNPILHFTCLDASIAI 454
Query: 428 QE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGPS 484
+ F R SII+TSGT+SP+D + + LNF ++ + +T + IV G
Sbjct: 455 KPVFERFY--SIIITSGTISPLDMYPK--MLNFQTVIQESYAMTLARRSFLPMIVTKGSD 510
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
++S + R+ + G+ +V ++I PDG+++FFPSY M+ I+ W+N G L
Sbjct: 511 QVSISSRFEIRNDPSVVRNYGSLLVEFSKITPDGMVVFFPSYLYMESIISMWQNM--GVL 568
Query: 545 TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W K+K +VE + LA+E Y ++ GAV +V RGKVSEG+DF
Sbjct: 569 DEVW----KYKLILVETPDAQETSLALETYRKAC--SNGRGAVLLSVARGKVSEGIDFDH 622
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
H GR V++ G+PF ++ + E++ Q + ++ LSF A R
Sbjct: 623 HYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIRENDF----LSF---------DAMRH 669
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RF+ +K+Q+ WI
Sbjct: 670 AAQCLGRVLRGKDDYGIMVLADRRFSR--KKNQLPKWI 705
>gi|409045964|gb|EKM55444.1| hypothetical protein PHACADRAFT_256068 [Phanerochaete carnosa
HHB-10118-sp]
Length = 792
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 199/781 (25%), Positives = 354/781 (45%), Gaps = 120/781 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FYIDDLPVIFPYDRIYPEQYSYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
+ L +Y SRT ++ + + ELK YR
Sbjct: 63 YPARRKL----------------------------IYCSRTVPEIEKALAELKRLMEYRL 94
Query: 122 KM---------------VILGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKGTNR 160
+ + L SR+ LCIH EVS +G + CR L C+KG +
Sbjct: 95 SIAETEEQQAKERGFYGLGLTSRKNLCIHPEVSKEKKGRVVDARCRDLTNSAVCQKGRDN 154
Query: 161 -----RCNHHSRVADYMKNN---PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
C+ H + N P + + D++ GR CPYF+ R + VD+
Sbjct: 155 PGSVDLCDWHENLGKLEPGNLIPPGIWT----LADVLQYGRDNVVCPYFLVRRMMAFVDV 210
Query: 213 VFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
V ++YL+DP + + E K+SI++FDEAHN++ +C ++ S DL+ +L +
Sbjct: 211 VIYSFHYLLDPKVAEQVSKEMSKDSIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVT 270
Query: 272 NCID-ISSTRRGQSS---DETLN---------PDNFAILRALLLKLEKRIAEVPINSKE- 317
D I +R +S DE D +++ +L + +P N ++
Sbjct: 271 RLGDKIEEIKRTDASKLQDEYAKLVEGLQEAATDEDSLVANPVLPEDLLTEAIPGNIRKA 330
Query: 318 ---LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQNKKSTT 367
+ F K Y+ + L++ ET + DI + L+ ++LQ+ T
Sbjct: 331 EHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLVRTL 390
Query: 368 AC-RIESISNILKII-FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
R++ S + K+ F + + + + + + A V + + C +P I
Sbjct: 391 ELNRLDEFSALQKVASFATLVATYEKGFLLILEPFETDNATV----PNPIFHFTCLDPSI 446
Query: 426 AMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
A++ F R S+++TSGT+SP+D + + L+ ++ +T ++ G
Sbjct: 447 AIKTVFERF--SSVVITSGTISPLDMYPKMLQFTPVIQESYSMTLTRNSFLPLVITRGSD 504
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
++S + R+ + G+ ++ ++IVPDG++ FFPSY M+ +A W + G L
Sbjct: 505 QVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GIL 562
Query: 545 TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W K+K VE ++ +A+E+Y + GAV +V RGKVSEG+DF
Sbjct: 563 NEVW----KYKLIFVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSEGIDFDH 616
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
+ GRAV++ G+P+ ++ + EYL + + E+ L F A R
Sbjct: 617 NYGRAVIMFGVPYQYTESRILKARLEYLRDTYRIRESEF----LGF---------DAMRN 663
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYTLTRF 722
Q VGRV+R + D+G ++F D+RFA +++++ WI +I + S D+ TL++
Sbjct: 664 AAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMAITLSKL 723
Query: 723 F 723
F
Sbjct: 724 F 724
>gi|302836153|ref|XP_002949637.1| hypothetical protein VOLCADRAFT_59582 [Volvox carteri f.
nagariensis]
gi|300264996|gb|EFJ49189.1| hypothetical protein VOLCADRAFT_59582 [Volvox carteri f.
nagariensis]
Length = 780
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 206/783 (26%), Positives = 350/783 (44%), Gaps = 142/783 (18%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ + G+ V FP+E Y Q YM ++ ++L + + LLE PTGTGKT+ LL
Sbjct: 3 FNLEGLTVYFPYEYIYPEQYRYMLELKRALDARGHCLLEMPTGTGKTITLL--------- 53
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
S + S Q ++ ++Y +RT ++ +V+ EL + +YR
Sbjct: 54 -------------------SLITSYQLAHKEVGKLIYCTRTVPEMEKVLAELAELIDYRA 94
Query: 122 K----------MVILG--SREQLCIHREVSLLRGSAQ--NNACRFLCKKGTNRRCNHHS- 166
K ++ LG SR+ LCIH V+ GS + + CR L R
Sbjct: 95 KYLGRGPGSNEILALGLSSRKNLCIHPRVAE-EGSRESVDAGCRRLTASWVRERAAERGA 153
Query: 167 -------------------RVADYMKNNPHLGDEPI------DIEDLVNIGRTFGPCPYF 201
+ D+ + + G E + + DL + GR G CPYF
Sbjct: 154 RGGEGGAEEGGSGGSVADIELCDFFEGHERAGVEALLPPGVYTLSDLRDFGRKRGWCPYF 213
Query: 202 MTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSS 260
+ R + ++V Y Y+IDP + + E K +++FDEAHN++ +C +A S +L
Sbjct: 214 LARHMMAFANVVVYNYQYMIDPKVSQMVSRELEKECVVVFDEAHNIDNVCIEALSVNLRK 273
Query: 261 GLLTACISEAKNCIDISST--RRGQSSDETLNPDNFAILRALLLKLEKRIAE-------- 310
L A +N +S++ R ++ L + ++ L+ + R E
Sbjct: 274 QTLEAA---GRNLGKLSNSIRRAREADAARLQGEYNRLVAGLVAQGALRGGEDWLANPAL 330
Query: 311 --------VPINSKE----LGF-TKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE 357
VP N + +GF + ++ E +A +T +T +V + LQE
Sbjct: 331 PEDVVQETVPGNIRRAEHFMGFLNRFLAFLREKMASPVVTSQTP-------QVFLQELQE 383
Query: 358 DKLQNKKSTTAC--RIESISNILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKAS 413
+ K+ C R+ S+ L+I D+ T A + V A +++
Sbjct: 384 RVQVDAKTLKFCYDRLSSLLKTLEITNTDEFTPIQLVADFATLVGTYAKGFAIIMEPYDE 443
Query: 414 R-------TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN 465
R L C + +AM+ FS+ + S+++TSGTLSP+D + + L N P+ +++
Sbjct: 444 RLPQVPDPVLQLSCLDASLAMKPVFSKFQ--SVVITSGTLSPIDLYPRILNFN-PVAIQS 500
Query: 466 PHVITSKQIWAGIVPV-GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
+ ++ +V G +++ + R + G +V ++ +VPDG++ FF
Sbjct: 501 FQMTLTRDCLCPVVVTRGADQMPMSTKFEMRGDPGVMRNYGRLLVELSAVVPDGIVAFFV 560
Query: 525 SYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS 584
SY MDQ I+ W + I + I +HK +E + LA++++ + S
Sbjct: 561 SYRYMDQIISKWHDMG------ILQEIMQHKLIFIETQDVVETTLALDNF--RRACDSGR 612
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
GAVF +V RGKV+EG+DF H GRAVV+ G+P+ +R + EYL Q + +Y
Sbjct: 613 GAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPYQYTLSRILRARLEYLRETFQIKENDY- 671
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQP 704
L+F A R Q VGRVIR + DYG +IF D+R+ ++ ++ WI
Sbjct: 672 ---LAF---------DAVRQAAQCVGRVIRSKADYGMMIFADKRYQRHDKRDKLPQWITR 719
Query: 705 HIQ 707
H++
Sbjct: 720 HLK 722
>gi|301097939|ref|XP_002898063.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105424|gb|EEY63476.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 622
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 160/541 (29%), Positives = 248/541 (45%), Gaps = 96/541 (17%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQ----------LCIHREVSLLRGS 144
P I + SRTHSQL Q + ELK I GS E LC++ +V+
Sbjct: 136 PKIFFCSRTHSQLTQAVNELKDCPASYMRAIPGSTELRSCVLAVKRLLCVNEDVNS-EPM 194
Query: 145 AQNNACRFLCKKGTNRR----------CNHH-SRVADYMKNNPHLGDEPIDIEDLVNIGR 193
N C+ L + RR C ++ + ++ +P + DIED+ +
Sbjct: 195 LVNEKCQELRMEKERRRMAGDEEGEGGCKYNQTSFSELRAQSPQV----WDIEDITKLAS 250
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADA 253
T C YF ++ +T IVF PYNY++DP RK +G+ NSI++ DEAHN+E C
Sbjct: 251 TCEECAYFFSKSKLETAHIVFCPYNYILDPAIRKAVGITLHNSIVVLDEAHNVEDTCRSG 310
Query: 254 ASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPI 313
AS +++ +L I + I DE P + +R +L +E A
Sbjct: 311 ASLEITDNMLGRAIKSFDDVI--------WQGDEGFQPPAYDAVRRMLSSVETWFAVNEE 362
Query: 314 NSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIES 373
++L PG + LL+ N TA +LI + A + D +N
Sbjct: 363 LHEQLKLATPGKKV--LLS--NSALNTATRLISV----ATYMFSDNCKN----------- 403
Query: 374 ISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL 433
++ K++ K RV + +++ K L WC + + E +R
Sbjct: 404 -ADDFKLLITKK-------MRV-----NDEGEEIIDTK----LCIWCLSAAVVFAEVAR- 445
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT-SKQIWAGIVPVGPSGYLLNSSY 492
S+IL SGTLSPM+SFA EL ++FP+R+E HV+ KQ++ G + GP G L S+Y
Sbjct: 446 NSHSVILASGTLSPMNSFAGELGVDFPIRLEANHVVNMRKQVFVGALMNGPGGVDLLSTY 505
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
+N+ + +Y+ +G ++ A+++P G+L+FFPSY L+ A W+ T IW ++
Sbjct: 506 KNQQNFQYQDSMGYLLLQYAQMIPGGILMFFPSYALLGILKARWERTG------IWAKLV 559
Query: 553 KHKKPVVEPRQSSLFPLAIED------------------YMAKLKDTSTSGAVFFAVCRG 594
KHKK EPRQ F + D +M + +GA+F AV RG
Sbjct: 560 KHKKMFSEPRQGGKFFDELLDKYKNSIARHAASQDAPSGWMNDNAEPRETGAIFLAVYRG 619
Query: 595 K 595
K
Sbjct: 620 K 620
>gi|365983344|ref|XP_003668505.1| hypothetical protein NDAI_0B02270 [Naumovozyma dairenensis CBS 421]
gi|343767272|emb|CCD23262.1| hypothetical protein NDAI_0B02270 [Naumovozyma dairenensis CBS 421]
Length = 771
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 196/756 (25%), Positives = 339/756 (44%), Gaps = 118/756 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+++
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYHYMCDLKKTLDAGGNSILEMPSGTGKTVSLLSLTISY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMAYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H VS R GS + CR + R+
Sbjct: 95 KELGHVETFRGLGLTSRKNLCLHPVVSKERKGSVVDEKCRRMTNGIAKRKLEQDPNADAE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + M+ + +L + E L+ CPYF+ R + +I+ Y+YL
Sbjct: 155 LCEYHENLYK-MEVDEYLPNGVFSFEKLIKYCEERTICPYFVVRRMISMCNIMIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA---KNCID- 275
+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ +L A + ID
Sbjct: 214 LDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTNDVLRRATKGAHALEEKIDD 273
Query: 276 ---ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL------GFTKPGPY 326
I S R D+ + + + ++ + E+ E P+ SK+L G + +
Sbjct: 274 VRKIDSQRLQDEYDKLVEGLHSS---DIVPEQEEPFVETPVLSKDLLKEAIPGNIRRAEH 330
Query: 327 IYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTACRIESISNILKII- 381
L L +T K++ ++ E LQ K ++K C E +S +++ +
Sbjct: 331 FVSFLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIDRKPLRFCS-ERLSLLVRTLE 389
Query: 382 ---------FRDKGT------AHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIA 426
+D T + + + + + A V + + + C + IA
Sbjct: 390 VNDVEDFNSLKDIATFATLISTYEDGFLLIIEPYEIENAAV----PNPIMRFTCLDASIA 445
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
++ + S+I+TSGT+SP+D + + L L+ + K IV G
Sbjct: 446 IKPVFE-KFSSVIITSGTISPLDMYPRMLNFETVLQKSYSMTLAKKSFLPMIVTKGSDQV 504
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
++S + R+ + G+ +V A+I PDG+++FFPSY M+ ++ W+ + G L
Sbjct: 505 AISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQ--TMGILDE 562
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+W KHK +VE + LA+E Y ++ GA+ +V RGKVSEG+DF
Sbjct: 563 VW----KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDHQY 616
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GR V++ G+PF ++ + E+L Q + ++ LSF A R
Sbjct: 617 GRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF---------DAMRHAA 663
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RF+ +++Q+ WI
Sbjct: 664 QCLGRVLRGKDDYGVMVLADRRFSR--KRTQLPKWI 697
>gi|50549437|ref|XP_502189.1| YALI0C23639p [Yarrowia lipolytica]
gi|74635004|sp|Q6CAX3.1|CHL1_YARLI RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49648056|emb|CAG82511.1| YALI0C23639p [Yarrowia lipolytica CLIB122]
Length = 803
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 183/681 (26%), Positives = 313/681 (45%), Gaps = 107/681 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP----------KMVILGSREQLCIHREVSLLRG-SA 145
I++ SRTHSQL Q + +++ + + P K++ LGSR+QLCI+ VS + A
Sbjct: 170 IIFASRTHSQLSQFVGQMQHTTFPPSSDLQDLESTKLISLGSRKQLCINPRVSHMNSVQA 229
Query: 146 QNNACRFLCKKGTNRRCNHHSRVADYMKNNPH--LGD------------EPIDIEDLVNI 191
N+ACR L ++G C ++ NPH LG E +DIEDL +
Sbjct: 230 MNDACRDL-REGKKGGCKYY--------KNPHDALGKVDINTFRDTTLAEILDIEDLYKL 280
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G+ CPY+ +R +++ PY L+ RK + + KNSI+I DEAHNL
Sbjct: 281 GKHTSTCPYYASRASIPASEVITVPYQILLSRSARKAIDLPVKNSIVIIDEAHNL----- 335
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRG--------QSSDETLNPDNFAILRALLLK 303
D + L T I++++ +SS G Q+ + N N L +L
Sbjct: 336 ----LDTITSLHTMSITKSQ----VSSASSGLQKYQHKFQNRLNSGNRVNLGYLVNMLQA 387
Query: 304 LEKRIAEV-PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN 362
LE + + KE T PG T T L D A+L+ ++L+
Sbjct: 388 LEVFFEKAQKFHKKE---TAPG------------TPVTTSSLFD--GSTADLINVNRLEK 430
Query: 363 --KKSTTACRIESISNILKIIFRDKGTAHSAY------YRVHVREADANAADVLKGKASR 414
+S +IES + ++K + S + V D+ G
Sbjct: 431 YIDESKIVFKIESYLEHVNGETQEKSHSSSLVLSSVMEFLRQVNNPDSEGVLCFDGPTK- 489
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP-------H 467
L + +P ++ ++L GT+ P + + L P ++ H
Sbjct: 490 -LKYQLLDPSEPFKDIVE-NARCVVLAGGTMEPTGDYLEYL---LPYLSQDQIKLFSCGH 544
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
VI + + ++P GP+ Y N ++ R+ + ++ T++ ++I+P+G+++FFPSY
Sbjct: 545 VIPPQNLSVQVIPNGPN-YSFNFTFDKRNDEKMILDVAITLLVYSKIIPEGMVVFFPSYK 603
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAV 587
++Q +A WK I+E + K+ VE + S +E +++ + GA+
Sbjct: 604 YLEQVVAVWKKAKKDG-KNIYEILNDQKRIFVESQHDS-----VEKTLSEYAEEVPKGAI 657
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL----QAQSQGGEY 643
+V GK+SEG++F+D RAV + G+PF + ++ KR+Y++ + +++G
Sbjct: 658 LLSVVGGKMSEGINFSDGLARAVFMIGLPFPNLMSAEIIAKRKYIEQSVSEKMKAKGVSA 717
Query: 644 KET-KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
KE + S + D+Y RAVNQ+VGR IRH +DY I D RF P + ++S W+
Sbjct: 718 KEALEASKGAARDFYMNICLRAVNQSVGRAIRHANDYACIFLLDGRFGKPEIQKKLSKWM 777
Query: 703 QPHIQCYSKFGDVVYTLTRFF 723
+ I+ S F + + + +FF
Sbjct: 778 REGIREGS-FKEALGEVQQFF 797
Score = 47.8 bits (112), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
P+ Y Q+ +ME + +++ + ESPTGTGKTL L+C ++ W
Sbjct: 12 PYTPYPIQVDFMEALYDCIESYKVGIFESPTGTGKTLSLICGSMTW 57
>gi|121799524|sp|Q2U587.1|CHL1_ASPOR RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|83773151|dbj|BAE63278.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 721
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 200/771 (25%), Positives = 338/771 (43%), Gaps = 121/771 (15%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQV 73
P+ YD QL +M + ++ A+ ESPTG K L TL K
Sbjct: 11 PYSPYDIQLQFMRALYSCIEKGKVAVFESPTG--KLAGLSTGTLELLKRF---------- 58
Query: 74 NNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR---PK-------- 122
Q S GD + ILY SRTHSQL Q EL+ N PK
Sbjct: 59 --QHKSSAHPRQDEDYGDEDI-KILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVAD 115
Query: 123 ---------MVILGSREQLCIHREVSLLRG-SAQNNACRFLCKKGT--NRRCNH---HSR 167
+ LGSR+ LCI+ VS L +A + C + + G +RC +
Sbjct: 116 TDGLQEGVRHLSLGSRKNLCINPRVSSLDNVTAISERCLDMQQPGVAAEQRCPFLPSNEN 175
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
A ++ H+ DIED+ +G+ G CPY+ +R + K +IV PY L+ R
Sbjct: 176 EAQVLQFRDHVLATVKDIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARD 235
Query: 228 GLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST--RRGQSS 285
L + K +++ DEAHNL ++ S +T +SE + + +T R+ ++
Sbjct: 236 ALDLSIKGHVVVIDEAHNLMDAISNIHS-------VTITLSELQTSLFQLTTYARKFKTR 288
Query: 286 DETLNPDNFAILRALLLKLEKRIAEVPINSKEL-GFTKPGPYIYELLADLNITQETAYKL 344
+ N + A + L+ + + + S+ G +P +L++ + Q YKL
Sbjct: 289 LKGKNRNYIAQVIRLVTSITDHLKTILETSQAPEGPVQPS----DLMSGKGVDQINPYKL 344
Query: 345 IDI---------VEVAAELLQE--DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYY 393
V+ +E +E D+ ++K +T S +L ++ + +Y
Sbjct: 345 CRYLRESKLARKVDGYSEFSRERADRQADRKPSTPVLFHIQSFLLPLM--NLSAEGKLFY 402
Query: 394 RVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSF 451
+K + L + +P M +F + + ++IL GT+SPM +
Sbjct: 403 --------------IKAQGDIQLKYMLLDP---MNQFREIVDDARAVILAGGTMSPMTDY 445
Query: 452 AQELKLNFPL-------RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
L FP HVI + + A ++ G +G + ++ RDS
Sbjct: 446 IHHL---FPYVPSSRLGTFSYGHVIPPENLIAQVLGKGVTGTEFDFTFETRDSERM---- 498
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT-TIWERICKHKKPVVEPRQ 563
++PDG++ FFPSY + Q ++ WK T G T+++ I K + E R
Sbjct: 499 ---------VIPDGVVAFFPSYDYLSQVLSIWKRTLAGEKNRTVYDLIEGKKTILHESRD 549
Query: 564 SSLFPLAIEDYMAKLKDT--STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMT 621
++ + E+ + + S GA+ +V GK+SEG++F+D GR V+I G+PF +
Sbjct: 550 VTI---STEELLQEYASIVGSGRGALLLSVVGGKLSEGINFSDRLGRGVLIVGLPFPNIR 606
Query: 622 DPKVRLKREYLDLQA--QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ K Y++ +A +S G + ++ +G+D+Y RAVNQ +GR IRHR+DY
Sbjct: 607 SAVWQAKIHYVEQKAYKESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAIRHRNDY 666
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF---GDVVYTLTRFFREER 727
AI+ D R+ P+ + ++ WI+ + S G + +L++FF +R
Sbjct: 667 AAIVLMDRRYDKPAIQGKLPAWIKQSMASSSALRPAGATIGSLSKFFVAQR 717
>gi|194881824|ref|XP_001975021.1| GG22096 [Drosophila erecta]
gi|190658208|gb|EDV55421.1| GG22096 [Drosophila erecta]
Length = 769
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 202/753 (26%), Positives = 343/753 (45%), Gaps = 108/753 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
V ++ + ++Y SRT ++ +VI EL+
Sbjct: 60 ------------------MVEHPET----VRKLIYCSRTVPEIEKVIAELQNLMVYYERQ 97
Query: 117 -SNYRPKM-VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADY 171
N P ++L SR+ +CIH EVS R G A + C L R + + + Y
Sbjct: 98 CPNPPPLTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDAETPICQY 157
Query: 172 MKNNPHLGDE---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E P+ I+DL GR+ CPYF+ R IV Y+YL+DP
Sbjct: 158 FEGFSMEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS--------------SGLLTACISEA 270
+ + E + S ++FDEAHN++ +C D+ S ++ + L+ E
Sbjct: 218 AQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNQLTKLVQDIREED 277
Query: 271 KNCIDISSTRRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
N ++ R Q D ++ D IL +L + VP N + L F +
Sbjct: 278 TNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFI 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI---- 377
YI L ++ QE+ + ++++++ E K ++ ++ R IS++
Sbjct: 338 EYIKTRLRVHHVVQESPAGFLK--DISSKICIERKPLRFCAERLSSLLRTLEISDLTEYG 395
Query: 378 -LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRL 433
L +I F + ++ + + + D V ++ L + C + IAM FSR
Sbjct: 396 ALTLITHFATLVSTYTKGFTIIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRF 451
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+ ++++TSGTLSPMD + + L + + + + IV G ++S +
Sbjct: 452 Q--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFE 509
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G +V +A+ VPDG++ FF SY ++ +A W + I + + +
Sbjct: 510 TREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLR 563
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +E + ++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++
Sbjct: 564 YKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMF 621
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + +YL Q Q + ++ L+F A R Q VGR +
Sbjct: 622 GIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAL 668
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 669 RGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHL 701
>gi|238506092|ref|XP_002384248.1| DNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220690362|gb|EED46712.1| DNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 777
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 184/695 (26%), Positives = 320/695 (46%), Gaps = 94/695 (13%)
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKTSNYR---PK-----------------MVILGSR 129
GD + ILY SRTHSQL Q EL+ N PK + LGSR
Sbjct: 116 GDEDI-KILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVADTDGLQEGVRHLSLGSR 174
Query: 130 EQLCIHREVSLLRG-SAQNNACRFLCKKGT--NRRCNH---HSRVADYMKNNPHLGDEPI 183
+ LCI+ VS L +A + C + + G +RC + A ++ H+
Sbjct: 175 KNLCINPRVSSLDNVTAISERCLDMQQPGVAAEQRCPFLPSNENEAQVLQFRDHVLATVK 234
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIED+ +G+ G CPY+ +R + K +IV PY L+ R L + K +++ DEA
Sbjct: 235 DIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALDLSIKGHVVVIDEA 294
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCIDISST--RRGQSSDETLNPDNFAILRALL 301
HNL ++ S +T +SE + + +T R+ ++ + N + A + L+
Sbjct: 295 HNLMDAISNIHS-------VTITLSELQTSLFQLTTYARKFKTRLKGKNRNYIAQVIRLV 347
Query: 302 LKLEKRIAEVPINSKE-LGFTKPGPYIYELLADLNITQETAYKLIDI---------VEVA 351
+ + + S+ G +P +L++ + Q YKL V+
Sbjct: 348 TSITDHLKTILETSQAPEGPVQPS----DLMSGKGVDQINPYKLCRYLRESKLARKVDGY 403
Query: 352 AELLQE--DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK 409
+E +E D+ ++K +T S +L ++ + +Y +K
Sbjct: 404 SEFSRERADRQADRKPSTPVLFHIQSFLLPLM--NLSAEGKLFY--------------IK 447
Query: 410 GKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPL------ 461
+ L + +P M +F + + ++IL GT+SPM + L FP
Sbjct: 448 AQGDIQLKYMLLDP---MNQFREIVDDARAVILAGGTMSPMTDYIHHL---FPYVPSSRL 501
Query: 462 -RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
HVI + + A ++ G +G + ++ RDS +LG T+ + +++PDG++
Sbjct: 502 GTFSYGHVIPPENLIAQVLGKGVTGTEFDFTFETRDSERMIVDLGRTMAALCQVIPDGVV 561
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLT-TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
FFPSY + Q ++ WK T G T+++ I K + E R ++ + E+ + +
Sbjct: 562 AFFPSYDYLSQVLSIWKRTLAGEKNRTVYDLIEGKKTILHESRDVTI---STEELLQEYA 618
Query: 580 DT--STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA- 636
S GA+ +V GK+SEG++F+D GR V+I G+PF + + K Y++ +A
Sbjct: 619 SIVGSGRGALLLSVVGGKLSEGINFSDRLGRGVLIVGLPFPNIRSAVWQAKIHYVEQKAY 678
Query: 637 -QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
+S G + ++ +G+D+Y RAVNQ +GR IRHR+DY AI+ D R+ P+ +
Sbjct: 679 KESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAIRHRNDYAAIVLMDRRYDKPAIQ 738
Query: 696 SQISLWIQPHIQCYSKF---GDVVYTLTRFFREER 727
++ WI+ + S G + +L++FF +R
Sbjct: 739 GKLPAWIKQSMASSSALRPAGATIGSLSKFFVAQR 773
>gi|195346339|ref|XP_002039723.1| GM15813 [Drosophila sechellia]
gi|194135072|gb|EDW56588.1| GM15813 [Drosophila sechellia]
Length = 769
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 202/753 (26%), Positives = 344/753 (45%), Gaps = 108/753 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
V ++ + ++Y SRT ++ +VI EL+
Sbjct: 60 ------------------MVEHPET----VRKLIYCSRTVPEIEKVIAELQNLMVYYERH 97
Query: 117 -SNYRP-KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADY 171
N P ++L SR+ +CIH EVS R G A + C L R + + + Y
Sbjct: 98 CPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHDMDAETPICQY 157
Query: 172 MKNNPHLGDE---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E P+ I+DL GR+ CPYF+ R IV Y+YL+DP
Sbjct: 158 FEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS--------------SGLLTACISEA 270
+ + E + S ++FDEAHN++ +C D+ S ++ + L+ E
Sbjct: 218 AQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREED 277
Query: 271 KNCIDISSTRRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
N ++ R Q D ++ D IL +L + VP N + L F +
Sbjct: 278 TNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFI 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI---- 377
YI L ++ QE+ + ++++++ E K ++ ++ R I+++
Sbjct: 338 EYIKTRLRVHHVVQESPAGFLK--DISSKICIERKPLRFCAERLSSLLRTLEINDLTEFG 395
Query: 378 -LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRL 433
L +I F + ++ + + + D V ++ L + C + IAM FSR
Sbjct: 396 ALTLITHFATLVSTYTKGFTIIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRF 451
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+ ++++TSGTLSPMD + + L + + +T + IV G ++S +
Sbjct: 452 Q--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLTRPCLLPMIVSKGNDQVTISSKFE 509
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G +V +A+ VPDG++ FF SY ++ +A W + I + + +
Sbjct: 510 TREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLR 563
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +E + ++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++
Sbjct: 564 YKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMF 621
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + +YL Q Q + ++ L+F A R Q VGR +
Sbjct: 622 GIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAL 668
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 669 RGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHL 701
>gi|428173412|gb|EKX42314.1| hypothetical protein GUITHDRAFT_141266 [Guillardia theta CCMP2712]
Length = 864
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 186/687 (27%), Positives = 298/687 (43%), Gaps = 89/687 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQNNACRFLC 154
++Y SRTHSQL Q + E+K + + K V L SR+ +CI+ +VS L+ S + NA
Sbjct: 196 VIYCSRTHSQLSQFMNEVKRTQWGKDLKAVSLASRKGMCINPKVSSLKSSTRINAACLDL 255
Query: 155 KKGTNRRCNHHSRVADYMKNNPHLGDEPI------------------DIEDLVNIGRTFG 196
+KG ++ +K + P DIED+V G+
Sbjct: 256 QKGVEDTESNIEDAPSALKAKKKKSNCPFYDQDRQLDLRDMILARVQDIEDIVENGKKVQ 315
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
CPY+ +R + ++V PY L+ R+ LG++ + +++I DEAHNL S
Sbjct: 316 CCPYYASRAAIRAAELVTIPYTSLVHKATREALGLKLEGNVVIIDEAHNLIEAVTTTHSS 375
Query: 257 DLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSK 316
LS +T S + ++ TR L+ N +R ++L L K++ + I+S+
Sbjct: 376 TLSYSAITLLKSLFSDYLERFCTR--------LSAKNAENVRLIILVL-KKLDQYMIDSE 426
Query: 317 ELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISN 376
G K L T ++ AE + N R S
Sbjct: 427 SKGSEK---------GSLKKTSGEGKPVVGKTVSVAEFCIMAGIDNVNFFQLLRYFDKSK 477
Query: 377 ILKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE 434
IL+ + F +K A Y + D GK S LS+ N +E + +
Sbjct: 478 ILQKLHGFYEKRLAE---YHEKAGFDGEDELDEATGKLS--LSYQLLNASTHFKEILQ-Q 531
Query: 435 VGSIILTSGTLSPMDSFAQELKLNF-PLRVEN---PHVITSKQIWAGIVPVGPSGYLLNS 490
S++L GT+ PM + Q+L + P R HVI + I V GP+G +
Sbjct: 532 AHSVVLAGGTMQPMAEYVQQLMPSIQPSRFRTLSVGHVIPKENILPLTVSTGPTGLKFDF 591
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
+ R K E+G IVNI + PDG+++F PSY ++ W T+ G + ++
Sbjct: 592 RHGTRSDPTQKSEIGRLIVNICGLTPDGIVVFLPSYSYEEELWTYW--TTEG----LVDK 645
Query: 551 ICKHKKPVVEPRQSSLFPLAIEDYMAKL----------KDTS----------------TS 584
I K KK EPR S + Y + KD+S +
Sbjct: 646 IAKKKKIFREPRSSGEVEAVLRQYEECIRTQGTENTSPKDSSCMVDTRILNRVTDRFPVT 705
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD-----LQAQSQ 639
GA+ V GK+SEG++F+D GR V++ G+PFA DP++ K +Y++ + +
Sbjct: 706 GAILLCVVGGKLSEGINFSDELGRCVIVVGLPFANRGDPRLLEKIKYVESLPPVTELVGE 765
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
+ T +G+ +Y +AVNQ +GR IRH DY AI+ D R+ + + +I+
Sbjct: 766 DSKSSPTLTGAKAGQAYYQNMCMKAVNQCIGRAIRHIADYAAILLVDSRYEGSNVRCKIT 825
Query: 700 LWIQPHIQCYS--KFGDVVYTLTRFFR 724
WI+ + S FG L +FF+
Sbjct: 826 SWIRDKLTADSPTSFGPCYQALAKFFK 852
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
+ +FPF Y Q+ M V +L + + ESPTGTGK++ L+C++L W K
Sbjct: 5 EFKFPFSPYTVQVQLMTAVYGALCDGAVGIFESPTGTGKSMSLICSSLRWLK 56
>gi|157132567|ref|XP_001656074.1| DNA repair helicase rad3/xp-d [Aedes aegypti]
gi|108884369|gb|EAT48594.1| AAEL000404-PA [Aedes aegypti]
Length = 760
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 202/751 (26%), Positives = 334/751 (44%), Gaps = 104/751 (13%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ ++ K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLIVAYIME-- 62
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRPKM 123
N I + ++Y SRT ++ +VI ELK NY K
Sbjct: 63 ---------NPHI----------------VRKLIYCSRTVPEIEKVIAELKHLMNYYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVA--DY 171
++L SR+ +CIH EVS R G + C + R VA Y
Sbjct: 98 TGVMPNITGLVLSSRKNMCIHSEVSKERDGKIVDAKCYGMTASYVRERATTDDSVAVCQY 157
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E I+DL + GR CPYF++R +V Y+YL+DP
Sbjct: 158 YEGFQAEGKESTLPPGVYSIDDLKDFGRERNWCPYFLSRFAINQAHVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL----TACISEAKNCIDISSTR 280
+ + E K S+++ DEAHN++ +C D+ S ++ L+ T + K ++
Sbjct: 218 AEVVSKELAKESVVVCDEAHNIDNVCVDSMSVKINRRLIEKSTTGVHTLEKYVAEMKEDD 277
Query: 281 RGQSSDETL------NPDNFA-----ILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
R + +DE L +FA +L +L E VP N + L F K
Sbjct: 278 RKRLNDEYLRLVQGLKDASFARETDMVLANPVLPTEILKEVVPGNIRNADHFLSFLKRFI 337
Query: 325 PYIYELLADLNITQET-AYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNI-----L 378
YI L ++ QE+ A L DI + + + ++ ++ R I+++ L
Sbjct: 338 EYIKSRLRVQHVVQESPAGFLKDIQQKVCIERKPLRFCAERLSSLLRTLEITDLTEFGPL 397
Query: 379 KII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEV 435
+I F + ++ + + + D V ++ L C + IAM+ F R +
Sbjct: 398 TVITSFATLVSTYTKGFTIIIEPFDDKTPTV----SNPILHLSCMDSSIAMKPIFQRFQ- 452
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+++TSGTLSPMD + + L + + + IV G ++S + R
Sbjct: 453 -SVVITSGTLSPMDMYPKILDFEPVVMSSFTMTLARPCLLPMIVSRGNDQVAISSKFETR 511
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ + G +V A+ VPDG++ FF SY ++ +A W + I + + ++K
Sbjct: 512 EDTAVTRNYGQLLVETAKTVPDGIVCFFTSYLYLESVVASWYDQG------IIDTLLRYK 565
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+E + ++ A+ +Y+ + GAV AV RG+VSEG+DF H GRAV++ G+
Sbjct: 566 LLFIETQDNAETSYALMNYVKACE--CGRGAVLLAVARGRVSEGVDFDHHLGRAVLMFGI 623
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ ++ + +YL Q Q + ++ L+F A R Q VGR IR
Sbjct: 624 PYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DALRHAAQCVGRAIRG 670
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ DYG +IF D+RF ++ ++ WIQ H+
Sbjct: 671 KTDYGIMIFADKRFGRQDKRGKLPKWIQEHL 701
>gi|281183417|gb|ADA53577.1| RH28463p [Drosophila melanogaster]
Length = 781
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 202/753 (26%), Positives = 343/753 (45%), Gaps = 108/753 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 17 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 71
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
V ++ + ++Y SRT ++ +VI EL+
Sbjct: 72 ------------------MVEHPET----VRKLIYCSRTVPEIEKVIAELQNLMVYYERH 109
Query: 117 -SNYRP-KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADY 171
N P ++L SR+ +CIH EVS R G A + C L R + + + Y
Sbjct: 110 CPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQY 169
Query: 172 MKNNPHLGDE---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E P+ I+DL GR+ CPYF+ R IV Y+YL+DP
Sbjct: 170 FEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKI 229
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS--------------SGLLTACISEA 270
+ + E + S ++FDEAHN++ +C D+ S ++ + L+ E
Sbjct: 230 AQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREED 289
Query: 271 KNCIDISSTRRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
N ++ R Q D ++ D IL +L + VP N + L F +
Sbjct: 290 TNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFI 349
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI---- 377
YI L ++ QE+ + ++++++ E K ++ ++ R IS++
Sbjct: 350 EYIKTRLRVHHVVQESPAGFLK--DISSKICIERKPLRFCAERLSSLLRTLEISDLTEYG 407
Query: 378 -LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRL 433
L +I F + ++ + + + D V ++ L + C + IAM FSR
Sbjct: 408 ALTLITHFATLVSTYTKGFTIIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRF 463
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+ ++++TSGTLSPMD + + L + + + + IV G ++S +
Sbjct: 464 Q--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFE 521
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G +V +A+ VPDG++ FF SY ++ +A W + I + + +
Sbjct: 522 TREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLR 575
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +E + ++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++
Sbjct: 576 YKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMF 633
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + +YL Q Q + ++ L+F A R Q VGR +
Sbjct: 634 GIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAL 680
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 681 RGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHL 713
>gi|195486599|ref|XP_002091573.1| GE12176 [Drosophila yakuba]
gi|194177674|gb|EDW91285.1| GE12176 [Drosophila yakuba]
Length = 769
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 202/753 (26%), Positives = 341/753 (45%), Gaps = 108/753 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
V ++ + ++Y SRT ++ +VI EL+
Sbjct: 60 ------------------MVEHPET----VRKLIYCSRTVPEIEKVIAELQNLMVYYERN 97
Query: 117 -SNYRPKM-VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADY 171
N P ++L SR+ +CIH EVS R G A + C L R + + + Y
Sbjct: 98 CPNPPPLTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDAETPICQY 157
Query: 172 MKNNPHLGDE---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E P+ I+DL GR CPYF+ R IV Y+YL+DP
Sbjct: 158 FEGFSMEGKESTLPVGVYSIDDLKEYGRARNWCPYFLARYAIAHAHIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS--------------SGLLTACISEA 270
+ + E + S ++FDEAHN++ +C D+ S ++ + L+ E
Sbjct: 218 AQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNQLTKLVQDIREED 277
Query: 271 KNCIDISSTRRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
N ++ R Q D ++ D IL +L + VP N + L F +
Sbjct: 278 TNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFI 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI---- 377
YI L ++ QE+ + +++ ++ E K ++ ++ R IS++
Sbjct: 338 EYIKTRLRVHHVVQESPAGFLK--DISTKICIERKPLRFCAERLSSLLRTLEISDLTEYG 395
Query: 378 -LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRL 433
L +I F + ++ + + + D V ++ L + C + IAM FSR
Sbjct: 396 ALTLITHFATLVSTYTKGFTIIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRF 451
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+ ++++TSGTLSPMD + + L + + + + IV G ++S +
Sbjct: 452 Q--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFE 509
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G +V +A+ VPDG++ FF SY ++ +A W + I + + +
Sbjct: 510 TREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLR 563
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +E + ++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++
Sbjct: 564 YKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMF 621
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + +YL Q Q + ++ L+F A R Q VGR +
Sbjct: 622 GIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAL 668
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 669 RGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHL 701
>gi|195585328|ref|XP_002082441.1| GD11571 [Drosophila simulans]
gi|194194450|gb|EDX08026.1| GD11571 [Drosophila simulans]
Length = 769
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 202/753 (26%), Positives = 343/753 (45%), Gaps = 108/753 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
V ++ + ++Y SRT ++ +VI EL+
Sbjct: 60 ------------------MVEHPET----VRKLIYCSRTVPEIEKVIAELQNLMVYYERH 97
Query: 117 -SNYRP-KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADY 171
N P ++L SR+ +CIH EVS R G A + C L R + + + Y
Sbjct: 98 CPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHDMDAETPICQY 157
Query: 172 MKNNPHLGDE---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E P+ I+DL GR+ CPYF+ R IV Y+YL+DP
Sbjct: 158 FEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS--------------SGLLTACISEA 270
+ + E + S ++FDEAHN++ +C D+ S ++ + L+ E
Sbjct: 218 AQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREED 277
Query: 271 KNCIDISSTRRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
N ++ R Q D ++ D IL +L + VP N + L F +
Sbjct: 278 TNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFI 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI---- 377
YI L ++ QE+ + ++++++ E K ++ ++ R IS++
Sbjct: 338 EYIKTRLRVHHVVQESPAGFLK--DISSKICIERKPLRFCAERLSSLLRTLEISDLTEFG 395
Query: 378 -LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRL 433
L +I F + ++ + + + D V ++ L + C + IAM FSR
Sbjct: 396 ALTLITHFATLVSTYTKGFTIIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRF 451
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+ ++++TSGTLSPMD + + L + + + + IV G ++S +
Sbjct: 452 Q--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFE 509
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G +V +A+ VPDG++ FF SY ++ +A W + I + + +
Sbjct: 510 TREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLR 563
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +E + ++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++
Sbjct: 564 YKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMF 621
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + +YL Q Q + ++ L+F A R Q VGR +
Sbjct: 622 GIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAL 668
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 669 RGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHL 701
>gi|317151049|ref|XP_001824411.2| ATP-dependent RNA helicase CHL1 [Aspergillus oryzae RIB40]
Length = 858
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 184/695 (26%), Positives = 320/695 (46%), Gaps = 94/695 (13%)
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKTSNYR---PK-----------------MVILGSR 129
GD + ILY SRTHSQL Q EL+ N PK + LGSR
Sbjct: 197 GDEDI-KILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVADTDGLQEGVRHLSLGSR 255
Query: 130 EQLCIHREVSLLRG-SAQNNACRFLCKKGT--NRRCNH---HSRVADYMKNNPHLGDEPI 183
+ LCI+ VS L +A + C + + G +RC + A ++ H+
Sbjct: 256 KNLCINPRVSSLDNVTAISERCLDMQQPGVAAEQRCPFLPSNENEAQVLQFRDHVLATVK 315
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIED+ +G+ G CPY+ +R + K +IV PY L+ R L + K +++ DEA
Sbjct: 316 DIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALDLSIKGHVVVIDEA 375
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCIDISST--RRGQSSDETLNPDNFAILRALL 301
HNL ++ S +T +SE + + +T R+ ++ + N + A + L+
Sbjct: 376 HNLMDAISNIHS-------VTITLSELQTSLFQLTTYARKFKTRLKGKNRNYIAQVIRLV 428
Query: 302 LKLEKRIAEVPINSKE-LGFTKPGPYIYELLADLNITQETAYKLIDI---------VEVA 351
+ + + S+ G +P +L++ + Q YKL V+
Sbjct: 429 TSITDHLKTILETSQAPEGPVQPS----DLMSGKGVDQINPYKLCRYLRESKLARKVDGY 484
Query: 352 AELLQE--DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK 409
+E +E D+ ++K +T S +L ++ + +Y +K
Sbjct: 485 SEFSRERADRQADRKPSTPVLFHIQSFLLPLM--NLSAEGKLFY--------------IK 528
Query: 410 GKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPL------ 461
+ L + +P M +F + + ++IL GT+SPM + L FP
Sbjct: 529 AQGDIQLKYMLLDP---MNQFREIVDDARAVILAGGTMSPMTDYIHHL---FPYVPSSRL 582
Query: 462 -RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
HVI + + A ++ G +G + ++ RDS +LG T+ + +++PDG++
Sbjct: 583 GTFSYGHVIPPENLIAQVLGKGVTGTEFDFTFETRDSERMIVDLGRTMAALCQVIPDGVV 642
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLT-TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
FFPSY + Q ++ WK T G T+++ I K + E R ++ + E+ + +
Sbjct: 643 AFFPSYDYLSQVLSIWKRTLAGEKNRTVYDLIEGKKTILHESRDVTI---STEELLQEYA 699
Query: 580 DT--STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA- 636
S GA+ +V GK+SEG++F+D GR V+I G+PF + + K Y++ +A
Sbjct: 700 SIVGSGRGALLLSVVGGKLSEGINFSDRLGRGVLIVGLPFPNIRSAVWQAKIHYVEQKAY 759
Query: 637 -QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
+S G + ++ +G+D+Y RAVNQ +GR IRHR+DY AI+ D R+ P+ +
Sbjct: 760 KESSGSDANRQLVAKAAGKDFYENSCMRAVNQCIGRAIRHRNDYAAIVLMDRRYDKPAIQ 819
Query: 696 SQISLWIQPHIQCYSKF---GDVVYTLTRFFREER 727
++ WI+ + S G + +L++FF +R
Sbjct: 820 GKLPAWIKQSMASSSALRPAGATIGSLSKFFVAQR 854
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
P+ YD QL +M + ++ A+ ESPTGTGK+L ++C +L W
Sbjct: 11 PYSPYDIQLQFMRALYSCIEKGKVAVFESPTGTGKSLSIICGSLTW 56
>gi|149248494|ref|XP_001528634.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|206558158|sp|A5DUW8.1|CHL1_LODEL RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|146448588|gb|EDK42976.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 892
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 181/648 (27%), Positives = 303/648 (46%), Gaps = 72/648 (11%)
Query: 95 PT-ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRGS 144
PT I +TSRTHSQL Q +L+ + + R K + LGSR+QLCI+ +V +G
Sbjct: 254 PTKIFFTSRTHSQLNQFSSQLRLTKFDASFKDLEERTKYLPLGSRKQLCINDKVKNRKGE 313
Query: 145 AQ-NNACRFL--CKKGTNRRCN--HHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPC 198
N+AC L KKG N + S ++ K L I DIEDL ++G + C
Sbjct: 314 QSINDACIDLQKTKKGCTYLPNPSNSSTISSATKEFADLSLAQIRDIEDLGDLGSSLHTC 373
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
PY+ RE K +++ PY L+ R L ++ KNSI+I DEAHN+ S +
Sbjct: 374 PYYSVREGIKLAEVISLPYQLLLQSGSRDALKLDIKNSIIIIDEAHNIFDTLTSLYSVKI 433
Query: 259 SSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLK-LEKRIAEVPINSKE 317
++ L+ I K I ++ + +S +N L LL+ L+ +A+ S +
Sbjct: 434 TAAQLSRTIKALK--IYMTKFLKKLNSGNRINLMKLTKLCKLLMDFLQSDLAK----SAK 487
Query: 318 LGFTKPGPYIYE-----------LLADLNITQETAYKLIDIVE-VAAELLQEDKLQNKKS 365
LG G I++ + A LN ++ A+KL +E + E + D N S
Sbjct: 488 LGDQVVGEEIFQGSTGDLVNIHKMEAYLNKSK-IAFKLQSYMEKIGVEDVGTDFKLNSSS 546
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
+ I LK + K + R++ D +V +L++ +P
Sbjct: 547 PI---LFDIVKFLKCLSYPKKEGKFFWDRIY---GDNGGCEV-------SLNYMLLDPCA 593
Query: 426 AMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP-------HVITSKQIWAGI 478
+E + +IL GT+ P F L FP N H+I + +
Sbjct: 594 VFKEIVD-QAKCVILCGGTMEPTSDFTDYL---FPSIKHNKIKKFACGHIIPKNNL--KV 647
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
+PVG + Y R+ ++ + LG ++ I IVP G+++F SY L+ + W+
Sbjct: 648 IPVGQYYGNFDFLYNRRNDLDQFKRLGEFLIKICEIVPAGIVVFISSYQLLSDIVKIWRE 707
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
TTI+ R+ K+ E +++ + +Y + + +T GA+ AV GK+SE
Sbjct: 708 ------TTIYSRLNLLKQVFEESVENTKLTSLLSEY-SYVINTQCKGAILLAVVGGKMSE 760
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G++F+D+ RAV++ GMP+ ++ KR +++ Q ++GG ++ + ++Y+
Sbjct: 761 GINFSDNLARAVIMVGMPYPNAFSGEIVAKRNFIEEQVITKGGTIQQAR---AKSYEYYD 817
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+AVNQ++GR IRH DY II D R+ P + ++S W++ I
Sbjct: 818 NLCMKAVNQSIGRSIRHAKDYAIIILLDYRYQTPKVQGKLSKWVRDRI 865
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAWRKSLGSFST 68
D P++ YD QL +M+ + ++LQN + ESPTGTGKTL ++C+++ W +
Sbjct: 14 DYHHPYDPYDIQLQFMDALYETLQNGYKIGMFESPTGTGKTLSIICSSMTWLRDYKRNYN 73
Query: 69 LGSQVNNQISGSQSSVNSSQSGD 91
L +++ + G+ S+ + Q+G+
Sbjct: 74 LNTKL---LEGNVSNNDDKQAGE 93
>gi|145525869|ref|XP_001448751.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416306|emb|CAK81354.1| unnamed protein product [Paramecium tetraurelia]
Length = 913
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 181/313 (57%), Gaps = 25/313 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
+L+ WC +P +A ++ + SII TSGTL+PM+S+ EL++ F +++ N HVI I
Sbjct: 449 SLNMWCLDPSLAFKKLKLNNICSIIFTSGTLAPMESWQSELQMEFKIQLSNKHVID---I 505
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+ + + SY+ R++ + LG I+N ++++ G++I F SY LM
Sbjct: 506 ANNVRAFQHLSF--DFSYQKRENEDQIINLGLAILNFSKVIKGGIIIVFSSYGLMQNIRR 563
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W N + +R+ + KK + E + S+ F +E + K GA+ FAV RG
Sbjct: 564 RWANQQ------LIQRLNEVKKCLWEEQGSAQFHNTLEVF----KQNGQKGAILFAVHRG 613
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ-AQSQGGEYKETKLSFLSG 653
KV+EG+D +D RAV + G+P+ + D K++LK+++LD Q A+++ G L+
Sbjct: 614 KVTEGIDLSDDLCRAVFLIGIPYPPLKDQKIKLKKQFLDQQLAKNRQG---------LTS 664
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFG 713
+DWY QQA RA NQA+GRVIRH +DYG I FCD RF + K+ +S W+QP IQ +
Sbjct: 665 KDWYMQQAVRATNQAIGRVIRHINDYGVIFFCDRRFLWSNMKNSLSKWVQPAIQSWKNDE 724
Query: 714 DVVYTLTRFFREE 726
DV++ L FF+ +
Sbjct: 725 DVLFNLKNFFQRQ 737
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 144/265 (54%), Gaps = 28/265 (10%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I ++ FP + YD Q+ YME V+Q L KCN LLESPTGTGKTL LLC+T+ W
Sbjct: 39 IENTEIYFPHKPYDVQVKYMESVVQILDKKCNGLLESPTGTGKTLSLLCSTMGWLHK--- 95
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVI 125
+ Q SG+ S++ I+Y SRTH+QL+QV QELK + Y P + +
Sbjct: 96 -----HRKEQQKSGASSNL-----------KIIYASRTHAQLKQVAQELKRTVYAPNISM 139
Query: 126 LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPID- 184
+GSR+Q C+ + S L+G+A ACR L K+ +C +++ D + N + I+
Sbjct: 140 VGSRDQYCL-LDFSNLKGNALIQACRRLVKRN---KCQFYNK--DSLPNIAAQNSKLINT 193
Query: 185 IEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH 244
+E+ G CPY+ RE D++ PYNYL+D F + E NSI+IFDEAH
Sbjct: 194 LEESKQFGHNNNVCPYYFERERLTNADLILLPYNYLLDREFSNIVNTE--NSIIIFDEAH 251
Query: 245 NLEGICADAASFDLSSGLLTACISE 269
N+ + SF ++ ++ E
Sbjct: 252 NVPSAAENGQSFFINETIVQEAKKE 276
>gi|402592700|gb|EJW86627.1| excision repair cross-complementing rodent repair deficiency
[Wuchereria bancrofti]
Length = 772
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 189/758 (24%), Positives = 340/758 (44%), Gaps = 119/758 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G++V FP++ Y Q++YM ++ ++L K + LLE P+GTGKT+ LL +A+
Sbjct: 16 VDGLEVYFPYDYIYPEQILYMSELKKTLDAKGHCLLEMPSGTGKTVSLLSLVIAYMLRF- 74
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------S 117
L ++Y SRT ++ + ++EL+
Sbjct: 75 --------------------------PDHLDKLVYCSRTIPEIEKCVEELRNLFKYYEQC 108
Query: 118 NYRPK---MVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGT--NRR-------CNH 164
+ +P V L +R+ LCI+ VS LR GS + AC+ L RR C
Sbjct: 109 DGKPPSLFAVALSARKNLCINESVSSLRQGSLVDGACQKLTASFVRAKRRLRPDLPCCAF 168
Query: 165 HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
++ + + + + D ++++L +G+ G CPYF++R + IV Y+Y++DP
Sbjct: 169 FEKLDE--QKDFNYPDGVYNLQNLRKLGQQRGICPYFLSRNVVDRAHIVVYSYHYILDPK 226
Query: 225 FRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ 283
+ + + ++S ++FDEAHN++ +C ++ +S L + +A + I +
Sbjct: 227 IAELVSKNFSRHSCVVFDEAHNIDNVCIES----MSVSLTKTTVEKATQKLGILEEHVQR 282
Query: 284 SSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL---------------GFTKPGPYIY 328
+E N + + L++ +RI E N + L G + +
Sbjct: 283 LREE--NSEQLRVEYDRLVEGLRRIEEERTNDQILANPVLPDMILKEAVPGTIRNALHFI 340
Query: 329 ELLADLN--ITQETAYKLIDIVEVAAELLQEDKLQ--NKKSTTAC--RIESISNILK--- 379
L N + K + I AA L + L +++ C R S++ L+
Sbjct: 341 SFLRRFNEYLKHRMRTKTVLIESPAAFLRDVNDLMHIDRRPLRFCAERFASLTRTLELAD 400
Query: 380 -------IIFRDKGTAHSAYYR---VHVREADANAADVLKGKASRTLSWWCFNPGIAMQE 429
++ + T S Y R V + D + S TL C + +A++
Sbjct: 401 ISDFSSLVLITNFATLVSTYARGFTVVIEPLDEKSGT----GHSCTLHLSCMDASVAIRP 456
Query: 430 -FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLL 488
F R ++++TSGTLSP+D + + L + + + I IV G +
Sbjct: 457 IFQRYH--TVVITSGTLSPLDMYPKILDFDPAIMASLSMTLARPCIAPLIVSKGNDQVAM 514
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
S + +R+ + G+ ++ +A +VPDG+++FF SY M+ I+ W + I
Sbjct: 515 TSRFESREDAAVIRNYGSLVLELASLVPDGVVVFFTSYLYMENVISTWYDQG------II 568
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
+ + K+K +E + +A+E Y+ GA+FF+V RGKVSEG+DF+ H GR
Sbjct: 569 DELLKYKLLFIETTDALETSIALEKYVEACD--CGRGAIFFSVARGKVSEGIDFSHHLGR 626
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
AV++ G+P+ +R + EYL + Q G + D+ A R Q
Sbjct: 627 AVIMLGVPYVYTESRILRARLEYL----REQLG---------IRENDFLTFDAMRQAAQC 673
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+GR +R + DYG ++F D+RF+ + ++ WIQ +I
Sbjct: 674 MGRALRGKSDYGLMVFADKRFSRKDKMGKLPRWIQEYI 711
>gi|45551134|ref|NP_726036.2| xeroderma pigmentosum D, isoform A [Drosophila melanogaster]
gi|45445340|gb|AAM70857.2| xeroderma pigmentosum D, isoform A [Drosophila melanogaster]
Length = 769
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 202/753 (26%), Positives = 343/753 (45%), Gaps = 108/753 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
V ++ + ++Y SRT ++ +VI EL+
Sbjct: 60 ------------------MVEHPET----VRKLIYCSRTVPEIEKVIAELQNLMVYYERH 97
Query: 117 -SNYRP-KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADY 171
N P ++L SR+ +CIH EVS R G A + C L R + + + Y
Sbjct: 98 CPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQY 157
Query: 172 MKNNPHLGDE---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E P+ I+DL GR+ CPYF+ R IV Y+YL+DP
Sbjct: 158 FEGFSLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS--------------SGLLTACISEA 270
+ + E + S ++FDEAHN++ +C D+ S ++ + L+ E
Sbjct: 218 AQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREED 277
Query: 271 KNCIDISSTRRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
N ++ R Q D ++ D IL +L + VP N + L F +
Sbjct: 278 TNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFI 337
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI---- 377
YI L ++ QE+ + ++++++ E K ++ ++ R IS++
Sbjct: 338 EYIKTRLRVHHVVQESPAGFLK--DISSKICIERKPLRFCAERLSSLLRTLEISDLTEYG 395
Query: 378 -LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRL 433
L +I F + ++ + + + D V ++ L + C + IAM FSR
Sbjct: 396 ALTLITHFATLVSTYTKGFTIIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRF 451
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+ ++++TSGTLSPMD + + L + + + + IV G ++S +
Sbjct: 452 Q--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFE 509
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G +V +A+ VPDG++ FF SY ++ +A W + I + + +
Sbjct: 510 TREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLR 563
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +E + ++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++
Sbjct: 564 YKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMF 621
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + +YL Q Q + ++ L+F A R Q VGR +
Sbjct: 622 GIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAL 668
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 669 RGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHL 701
>gi|406865719|gb|EKD18760.1| putative ATP-dependent RNA helicase chl1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 894
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 199/717 (27%), Positives = 315/717 (43%), Gaps = 115/717 (16%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP---------------KMVILGSREQLCIHREVSLL 141
I Y SRTHSQL Q I EL+ N+ P K + LGSR+ LCI+ +V+ L
Sbjct: 205 IFYCSRTHSQLTQFINELRRVNFPPSIKDENIKPSDIEDLKHLTLGSRKNLCINPKVNKL 264
Query: 142 RG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHL----GDEPI----DIEDLVNIG 192
+A N C L + T + H V K N L D + DIED+ ++G
Sbjct: 265 NSLTAVNERCAELQQTSTPK---EHKCVFLPNKENQTLVNTFRDRSLATIRDIEDMGDLG 321
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
+ G CPY+ +R + +IV PY L+ R+ LG+ K ++I DEAHNL +
Sbjct: 322 KQIGICPYYASRSAIRPAEIVTLPYPLLLQKSAREALGISLKGHVVIIDEAHNLMDAISG 381
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTR-RGQSSDETLNPDNFAILRALLLKLEKRIA-- 309
++S L A+ + + R R + + ++ +L LE R+A
Sbjct: 382 IHGVEVS--LRQLKRGRAQLGVYLQKFRNRLKGKNRVYIAQVVRVIDSLTGYLESRLALH 439
Query: 310 --EVPI--------NSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK 359
E P+ K G ELL+ + Q +KL+ LQE K
Sbjct: 440 VSETPLYLSFRADLEEKSDGIVSD----KELLSGKGVDQINLFKLV-------HYLQESK 488
Query: 360 LQNKKSTTACRIES-ISNILKIIFRDKGT-------------AHSA-----YYRVHVREA 400
L K + A E+ S K + K T H + +Y + A
Sbjct: 489 LARKVESYALYTETDTSTTAKTSEQSKSTPVLHQISSLLLALTHPSKEGRLFYALSPNPA 548
Query: 401 DANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
+ + L + +P Q E ++IL GT+SPM + L P
Sbjct: 549 SPDLIN---------LKFLLLDPAPHFQAIVS-EARAVILAGGTMSPMSDYTSHLFPYLP 598
Query: 461 ----LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
+ HVI + + A + GP+G + +++NR + + +LG ++NI +VP
Sbjct: 599 PAGITTLSCGHVIPKENLLAWNLSRGPTGQEFDFTFKNRGNNDMIDDLGRALLNICTVVP 658
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
DG+++FFPSY + ++ W+ + ++ +R+ K E ++ S+ + +Y A
Sbjct: 659 DGVVVFFPSYSYLSSIVSRWEVIPGQDQKSLLQRLEGKKVLFKESKEQSV-DTVLNEY-A 716
Query: 577 KLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD--- 633
K DT G + +V GK+SEG++F+D GR VVI G+PF + + R K +Y++
Sbjct: 717 KAIDTG-RGGLLLSVVGGKMSEGINFSDSLGRCVVIVGLPFPNINSAEWRAKIQYIESSI 775
Query: 634 ---LQAQSQGGE---------------YKETKLSFLSGE--DWYNQQASRAVNQAVGRVI 673
L+A+ G KE ++ GE ++Y RAVNQ+VGR I
Sbjct: 776 VERLEAEGLAGSGCTSTNQHIDGKLKLSKEEMITRGKGEAREFYENACMRAVNQSVGRAI 835
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS---KFGDVVYTLTRFFREER 727
RHR DY AI+ D+RF + ++ WI+ + S FG ++ L FFR +R
Sbjct: 836 RHRGDYAAIVMIDKRFEGQKIRGKLPGWIREGLVEGSGGKGFGVLMSALGGFFRGKR 892
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D PF Y Q +ME V Q L+N +LESPTGTGK+L L+C L W
Sbjct: 17 DFHHPFTPYTIQETFMETVYQVLENGKVGILESPTGTGKSLSLICGALTW 66
>gi|195565263|ref|XP_002106221.1| GD16747 [Drosophila simulans]
gi|194203595|gb|EDX17171.1| GD16747 [Drosophila simulans]
Length = 308
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 173/298 (58%), Gaps = 32/298 (10%)
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
D+ +Y LG TI+N+ARIVPDGLL+FFPSY ++++C+ W+ + +W I K
Sbjct: 12 DNPKYVSSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASG------LWADISCKK 65
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+EPR F +E++ ++D+ GAVF AVCRGKVSEGLDFAD GRAV+ITG+
Sbjct: 66 PIFLEPRSKDQFTSTMEEFYQAIRDSK--GAVFMAVCRGKVSEGLDFADRNGRAVIITGL 123
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PF + DPKV LKR YL + +E +L LSG++WYN A+RAVNQA+GRVIRH
Sbjct: 124 PFPPLKDPKVILKRRYL------EANRTRENQL--LSGQEWYNLDATRAVNQAIGRVIRH 175
Query: 676 RHDYGAIIFCDERFAHPSRKSQISL---WIQPHIQCYSKFGDVVYTLTRFFREERICGST 732
R+DYGAI+ CD RF S+ Q+S +PH S DV FRE +
Sbjct: 176 RNDYGAILLCDSRFKDASQVQQLSAKNGRSKPHRPLSSPVDDV-------FREMQSI-EK 227
Query: 733 NLKLIKTEVSGDVRELKPVDLLDKISLEEVPSSTPAVDQACYSLHEV-KNRNTSSHSG 789
N+ L K E RE + + +E ++T +AC S+ + K+R + SG
Sbjct: 228 NVDLEKVE----ERETRSKSESFSETRDETTAATGNAKKACTSVRCITKSRMSWKRSG 281
>gi|196006780|ref|XP_002113256.1| hypothetical protein TRIADDRAFT_50379 [Trichoplax adhaerens]
gi|190583660|gb|EDV23730.1| hypothetical protein TRIADDRAFT_50379 [Trichoplax adhaerens]
Length = 720
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 191/745 (25%), Positives = 339/745 (45%), Gaps = 129/745 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ ++L K + LE P+GTGKT+ LL +A++K
Sbjct: 5 IDGLLVYFPYDYIYPEQYSYMCELKRALDAKGHCALEMPSGTGKTISLLSLIIAYQKVYP 64
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
T ++Y SRT ++ + ++E+K
Sbjct: 65 LHIT---------------------------KLIYCSRTVPEIEKALEEMKILLEYYEKQ 97
Query: 117 SNYRPKMVILG--SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHS----RVA 169
+ + K + LG +R+ LCIH E+S R G + C L R NH V
Sbjct: 98 TGEKQKFLGLGLSARKNLCIHPEISKERDGKVVDGRCLGLTASYVRR--NHQQDRSVEVC 155
Query: 170 DYMKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
+ + G + + +++DL + G G CPYF+ R ++V Y YL+DP
Sbjct: 156 SFFEKFDTFGRDSVLPPGVYNLDDLKDFGAKQGWCPYFLARHSILHANVVVYSYYYLLDP 215
Query: 224 WFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG 282
+ E K S+++FDEAHN++ +C ++ + +S + C A + +D +
Sbjct: 216 KIADLVSKEMSKQSVVVFDEAHNIDNVCIESMTVKISRKTIDRC-QTALDVMDKKVKKIK 274
Query: 283 QSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAY 342
++ + L + ++ + L +K IA LL ++ QET
Sbjct: 275 ETDKKKLQEEYRRLVEGIYLIPDKTIA--------------------LLIVQHVVQETPM 314
Query: 343 KLIDIVEVAAELLQEDKLQNKKSTTAC--RIESISNILKIIFRDKG-------------T 387
+ ++E ++K C R++S+ + L+II + +
Sbjct: 315 SFL-------HHIKETVCIDRKPLRFCSERLQSLMHTLEIINNSEFAALAAAASFATLVS 367
Query: 388 AHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLS 446
+S + + + D A + L + C + IA++ F R + S+++TSGTLS
Sbjct: 368 TYSKGFTLIIEPFDDRAPTI----PDPVLHFSCMDASIAIKPVFDRFQ--SVVITSGTLS 421
Query: 447 PMDSFAQELKLNF-PLRVENPHVITSK-QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
P+D + + LNF P+ + + + ++ + IV G ++S + +R+ I +
Sbjct: 422 PLDMYPK--ILNFRPVSMSSYTMTLARPSLCPLIVTRGNDQVTISSKFESREDIAVMRNY 479
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQS 564
GN + + VPDG++ FFPSY M+ ++ W + I I ++K +E +
Sbjct: 480 GNLLAELTASVPDGVVCFFPSYTYMESVVSFWCDQG------IMNNIIRNKLLFIETQDL 533
Query: 565 SLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+ LA+E+Y ++ GAV +V RGKVSEG+DF H GRAV++ G+P+ K
Sbjct: 534 AETVLALENYYKACENGR--GAVLLSVARGKVSEGIDFDHHYGRAVLMFGIPYVYTQSRK 591
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA--VGRVIRHRHDYGAI 682
+R + +YL Q + ++ L+F A R QA VGR IR + DYG +
Sbjct: 592 LRARLDYLRENYQIRENDF----LTF---------DAMRHAAQASCVGRAIRGKSDYGIM 638
Query: 683 IFCDERFAHPSRKSQISLWIQPHIQ 707
+F D+R++ +K ++ WIQ +++
Sbjct: 639 VFADKRYSRLDKKGKLPKWIQEYLK 663
>gi|353227556|emb|CCA78059.1| probable RAD3-DNA helicase/ATPase [Piriformospora indica DSM 11827]
Length = 798
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 196/769 (25%), Positives = 343/769 (44%), Gaps = 132/769 (17%)
Query: 4 YKIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
++I + V FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FEIDNLPVVFPYDKIYPEQYKYMCDLKRTLDASGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
+ L +Y SRT ++ + + ELK
Sbjct: 63 FPTKRKL----------------------------IYCSRTVPEIEKALTELKRLMKYRI 94
Query: 116 ----TSNYRPKM-----VILGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKGTNR 160
T R K + L SR LC+H +VS +G + CR L C+KG
Sbjct: 95 ESAETDEQREKERAFTGLGLTSRRNLCLHPQVSTEKKGHVVDAKCRDLTSAAACEKGRAN 154
Query: 161 -----RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFA 215
C+ H + D M+ + + + DL+ GR CPYF R + VD++
Sbjct: 155 PGSVPLCDWHEGLND-MEPGSLVPPGILTLADLMERGRRTTTCPYFTIRRMMPFVDVIIY 213
Query: 216 PYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCI 274
++YL+DP + + + K++I++FDEAHN++ +C ++ S DL+ +L + +
Sbjct: 214 SFHYLLDPKVAEQVSKDLSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAVR------ 267
Query: 275 DISSTRRGQS------SDETLNPDNFAILRALLLKLEKRIAEVPINSKEL---------- 318
S T+ G+ +D + D +A L L + E PI S +
Sbjct: 268 --SVTKLGEKVEEIKLTDASKLQDEYAKLVQGLQDADADDNEDPIVSNPVLPEDLLKEAI 325
Query: 319 -GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RI 371
G + + L +T +++ +V E A LQ K K+ C R+
Sbjct: 326 PGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIEKRPLRFCAERL 385
Query: 372 ESISNILKIIFRDK----------GTAHSAY---YRVHVREADANAADVLKGKASRTLSW 418
+S+ L++ D+ T + Y + + + + + A V +
Sbjct: 386 QSLIRTLELTGLDEYYSLQKVASFATLVATYEKGFLLILEPFETDNATV----PNPIFHL 441
Query: 419 WCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAG 477
C +P A++ F R S+++TSGT+SP+D + + L+ ++ P +T
Sbjct: 442 ICLDPSFAIKPIFERF--SSVVITSGTISPLDMYPKMLQFTPVVQETYPMTLTRNCFLPL 499
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
++ G ++S + R+ + G+ ++ ++IVPDG++ FFPSY M+ +A W
Sbjct: 500 VITRGSDQVAISSQFEVRNDPAVVRNFGSILIEYSKIVPDGVVAFFPSYLYMESIVAAWN 559
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
+ G L +W KHK VE ++ +A+E+Y + + GAV +V RGKVS
Sbjct: 560 DM--GILEDVW----KHKLIFVETPDANETSIALENY--RRACNNGRGAVLLSVARGKVS 611
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EG+DF + GRAV++ +P+ +R + EYL + + E+ L F
Sbjct: 612 EGIDFDHNYGRAVIM--VPYQYTESRILRARLEYLRDTYRIRESEF----LGF------- 658
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGRV+R + D+G ++F D RFA ++S++ WI +I
Sbjct: 659 --DAMRNAAQCVGRVLRGKTDWGLMVFADRRFARSDKRSKLPKWINQYI 705
>gi|336364077|gb|EGN92441.1| hypothetical protein SERLA73DRAFT_99245 [Serpula lacrymans var.
lacrymans S7.3]
Length = 793
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 198/785 (25%), Positives = 354/785 (45%), Gaps = 125/785 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYR- 120
+ L +Y SRT ++ + + ELK YR
Sbjct: 63 YPTRRKL----------------------------IYCSRTVPEIEKALAELKRLVEYRI 94
Query: 121 -----PKM---------VILGSREQLCIHREVSL-LRGSAQNNACRFLCKKGTNRRCNHH 165
P+ + L SR+ LCIH EVS +G + CR L +
Sbjct: 95 SCAETPEEKEKEQNFTGLGLTSRKNLCIHPEVSKEKKGKVVDARCRDLTNTAVCEKARQD 154
Query: 166 SRVADYMKNNPHLGD-EPIDI--------EDLVNIGRTFGPCPYFMTRELQKTVDIVFAP 216
D + +LG EP ++ D++ GR CPYF R + VD+V
Sbjct: 155 PGSVDICDWHENLGQLEPGNLITPGIWTLADVLQHGRDNKLCPYFTIRRMMPFVDVVIYS 214
Query: 217 YNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE----AK 271
++YL+DP + + E K++I++FDEAHN++ +C ++ S DL+ +L + +
Sbjct: 215 FHYLLDPKVAEQVSKELSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVTKLGE 274
Query: 272 NCIDISSTRRGQSSDE--------------TLNPDNFA---ILRALLLKLEKRIAEVPIN 314
+I +T + DE + DNF +L LL +P N
Sbjct: 275 KIEEIKTTDAAKLQDEYAKLVEGLEEPASEAADEDNFMSNPVLPDDLLN-----EAIPGN 329
Query: 315 SKE----LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQNK 363
++ + F K Y+ + L++ ET + DI + L+ ++LQ+
Sbjct: 330 IRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSM 389
Query: 364 KSTTAC-RIESISNILKII-FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCF 421
T R++ S++ K+ F + + + + + + A V + + C
Sbjct: 390 IRTLELNRLDEYSSLQKVASFATLVATYEKGFLLILEPFETDNATV----PNPIFHFTCL 445
Query: 422 NPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP 480
+P +A++ F R S+++TSGT+SP+D + + L+ ++ P +T ++
Sbjct: 446 DPSLAIKPVFERF--SSVVITSGTISPLDMYPKMLQFTPVVQETYPMTLTRNAFLPLVIT 503
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
G ++S + R+ + G+ ++ ++IVPDG++ FFPSY M+ +A W +
Sbjct: 504 RGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAAWNDM- 562
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
G L +W K+K VE ++ +A+E+Y + GAV +V RGKVSEG+
Sbjct: 563 -GILNEVW----KNKLIFVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSEGI 615
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DF + GRAV++ G+P+ ++ + EYL + + E+ L F
Sbjct: 616 DFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LGF---------D 662
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYT 718
A R Q VGRV+R + D+G ++F D+RFA +++++ WI +I + S D+ T
Sbjct: 663 AMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITEVASNLSTDMALT 722
Query: 719 LTRFF 723
L++ F
Sbjct: 723 LSKLF 727
>gi|345792101|ref|XP_543872.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Canis
lupus familiaris]
Length = 905
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 173/698 (24%), Positives = 303/698 (43%), Gaps = 89/698 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC-- 150
I Y SRTHSQL Q + E++ S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCVNEDVKTL-GSVQLINDRCME 287
Query: 151 --------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-----DIEDLVNIGRTFGP 197
R +K RR H + Y L + + DIE LV +G+
Sbjct: 288 MQRSKHENRAEEEKPKRRRQEHQAACPFYNYEQLQLLRDQVLVGVKDIEQLVALGKEARA 347
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
CPY+ +R +V PY L+ R+ G+ + +++ DEAHNL S +
Sbjct: 348 CPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQVVVIDEAHNLIDTITGIHSVE 407
Query: 258 LSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE 317
+S L S+ ++ R L N ++ +L LEK + + N K+
Sbjct: 408 VSGSQLCQAHSQLLQYMERYGKR--------LKAKNLMYIKQILYLLEKFVTVLGGNVKQ 459
Query: 318 LGFTKP-----------GPYIYELLAD-LNITQETAY--------KLIDIVEVAAELLQE 357
T+ ++++ D +N+ + Y KL E +L
Sbjct: 460 NPNTQSLSQTGTELKTINDFLFQTQIDNINLFKVRHYCEKSMISRKLFGFTERYGIVLAP 519
Query: 358 DKLQNKKSTTACRIESISNILK---IIFRDKGTA----------HSAYYRVHVREADANA 404
+ Q + ++S+ + + + G A H + + A+ +
Sbjct: 520 SREQPNLAGLQHFLQSLQPTVTKTPVTPVEDGEARVPRPASPLMHIESFLAALTTANQDG 579
Query: 405 ADVLKGKAS---RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
+L + S +L + NP + + + E ++++ GT+ P+ F ++L +
Sbjct: 580 RVILSRQGSLSQSSLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFREQLLACAGV 638
Query: 462 RVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIV 515
E HVI I I+ GPS L +Y+ R+ + E G + N+ +V
Sbjct: 639 EAERVVEFSCGHVIPPDNILPLIICSGPSSQQLEFTYQKRELPQMMDETGRILCNLCTVV 698
Query: 516 PDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
P G++ FFPSY Q A W + + R+ KK EP++++ + +Y
Sbjct: 699 PGGVVCFFPSYEYQRQVYAHWDKSG------LLARLAVRKKIFQEPKRANQVEQVLMEYS 752
Query: 576 AKLK-----DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKRE 630
+K + +GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++ K
Sbjct: 753 RCIKCCGQAGGTVTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMA 812
Query: 631 YLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA 690
YLD G+ G+ +AVNQ++GR IRH+ D+ +I+ D+R+A
Sbjct: 813 YLDQTLPRVPGQPP-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYA 865
Query: 691 HPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERI 728
P ++ WI+ ++ + FG T+ +F RE+ +
Sbjct: 866 RPPILEKLPAWIRDRVEVRATFGPAFATMRKFHREKSV 903
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T +I I FPF Y Q +M ++ + L+ + ESPTGTGK+L ++C L+W
Sbjct: 5 TQEIGDIHFPFPFTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSVICGALSW 61
>gi|378731863|gb|EHY58322.1| chromosome transmission fidelity protein 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 839
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 186/673 (27%), Positives = 317/673 (47%), Gaps = 77/673 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKT-----------SNYRP--------KMVILGSREQLCIHRE 137
I+Y SRTHSQL Q + EL+ N RP K + LGSR+ LCI+ +
Sbjct: 195 IIYCSRTHSQLTQFVNELRRVKPPSSIPSAFDNLRPSTDLEERVKHLPLGSRKNLCINPK 254
Query: 138 VSLLRGS-AQNNACRFLCKKGT--NRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVN 190
V+ L + A N C L K GT +++C + D + D+ I DIEDL +
Sbjct: 255 VARLSSTTAINEQCLELQKPGTAKDKKCPYLPSKEDRQRMES-FRDKAIAQIRDIEDLAH 313
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ +R + +++ PY L+ R+ LG+ K+ ++I DEAHNL
Sbjct: 314 LGKRMDLCPYYASRSAITSAEVLTLPYPLLLQKSAREALGISVKDDVIIIDEAHNL---- 369
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTR---RGQSSDETLNPDNFAILRALLLKLEKR 307
ADA + S+ L + + +A + + + R R + + +L + L +
Sbjct: 370 ADAIAETFSAALRLSQLDQAVHQVTAYAVRFKNRLKGKNRVYVTQVLRLLNSFTDCL-RS 428
Query: 308 IAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTT 367
+ E + K++ T +L++ + Q +KL+ L E KL +K
Sbjct: 429 VGEKS-HMKDVTVTAS-----QLMSGKGVDQIRPHKLM-------RYLHESKLCHK---- 471
Query: 368 ACRIESISNILKII---FRDKGT--AHSAYYRVHVREADANAADVLKGKASRTLSWWCFN 422
+ES + + K + + KG + + + D V++ T+ + +
Sbjct: 472 ---VESYTEVQKSVEGQNQGKGALMQFQNFLSLLMNPDDEGRFFVVRQDGDITVHYTLLD 528
Query: 423 PGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL-RVEN---PHVITSKQIWAGI 478
P ++ + ++IL GT+SPM +A L R+E HV+ S ++A
Sbjct: 529 PREHFRDVVE-DARAVILAGGTMSPMADYANYLFSYLDKDRLETFSFGHVVPSSHLFAQP 587
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
V GPSG + ++ R S + ELG+ + +IVPDG+++FFPSY + Q +A W+
Sbjct: 588 VVQGPSGSEFDFTFEKRRSEQMILELGHLVSRTCKIVPDGVVVFFPSYDYLAQVVAVWQK 647
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
+ + + K K E + S+ L + DY + S GA+ +V GK+SE
Sbjct: 648 QPPA--LPLLQSLGKTKVTFQESKGVSVDEL-LRDYANAVD--SGKGALLLSVVGGKLSE 702
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD------LQAQSQGGEYKETKLSFLS 652
G++F+D GR V+ G+PF + + K ++++ + +S E + + +
Sbjct: 703 GINFSDKLGRVVIAVGLPFPNANGAEWKAKMQHVESLRYQQCRTESILPESQWQIEAKRA 762
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK- 711
D+Y RA+NQ++GRVIRHR+DY AII D R+A ++++ WIQ I +K
Sbjct: 763 SRDFYENACMRAINQSIGRVIRHRNDYAAIIMVDRRYATDRIRTKLPKWIQGSIGSDAKS 822
Query: 712 FGDVVYTLTRFFR 724
+ ++ L FFR
Sbjct: 823 WDEIERGLVEFFR 835
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
P++ YD QL +M ++ + ++ K + ESPTGTGK+L L+C L W
Sbjct: 11 PYQPYDIQLEFMTQLYRCIEGKKVGIFESPTGTGKSLSLICGALTW 56
>gi|299743627|ref|XP_001835886.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
gi|298405743|gb|EAU85951.2| CHL1 helicase [Coprinopsis cinerea okayama7#130]
Length = 905
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 181/715 (25%), Positives = 289/715 (40%), Gaps = 138/715 (19%)
Query: 86 SSQSGDSKLPT---ILYTSRTHSQLRQVIQELK--------------------------- 115
+ Q GD + T I Y SRTHSQL QV+ EL+
Sbjct: 232 TGQLGDEEETTCTKIYYASRTHSQLSQVLPELRRLKLKQQISVANHCTSAASGNQASTGR 291
Query: 116 -------------TSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRC 162
+ R ++V LGSR+QLCI+ E+ + S + ACR L +++
Sbjct: 292 KRCAEEHEDTDEEVAGKRIRIVALGSRKQLCINDELRE-KSSDLDEACRELLGGRASQK- 349
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
DIEDL GR CPYF +R+ ++V PYN L+
Sbjct: 350 ---------------------DIEDLAEAGRLANTCPYFGSRKAIPQAELVTLPYNLLLQ 388
Query: 223 PWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG 282
R+ LG++ K I+I DEAHNL ++ LS G L + + + TR
Sbjct: 389 KSAREALGIDLKGQIVIIDEAHNLIPTLLSLSTHRLSYGTLAISLQQVAEYVRRFKTR-- 446
Query: 283 QSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAY 342
L+P N L+ L++ LE IN + E+ A L ++ A
Sbjct: 447 ------LSPANMLQLKRLVIFLEALKKAAGIN------------LLEVEAYLKKSK-IAR 487
Query: 343 KLIDIVEVAAELLQEDKLQNKKSTTAC--RIESISNILKIIFRDKGTAHSAYYRVHVREA 400
K+ V+ AE + +KS + + + +K + + V
Sbjct: 488 KISGYVDKQAEKDSASSVPRRKSRKGAIPPLHVVEDFMKSLSNVNDDGRVTFTLVETAGQ 547
Query: 401 DANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
+A L + NP E + +IIL GT+SP+ +L + P
Sbjct: 548 EATV----------ELKYQLLNPAPNFLEIVE-DARAIILAGGTMSPISDVTNQLFYSVP 596
Query: 461 L-RVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
RV N HVI + V GP G+ L+ + ELG I N A I P
Sbjct: 597 RERVSNFSCGHVIPEDNLKPLAVMKGPKGHDLDFRANRQSDPTVLAELGQIIFNYASITP 656
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
G+++FFPSY ++ A W + + +R K EP +S+ +++Y
Sbjct: 657 AGMIVFFPSYSFLNTAKATWGKSK------VLDRFGTKKAVFFEPEESNAVESVLQEYSK 710
Query: 577 KLK--------------------------DTSTSGAVFFAVCRGKVSEGLDFADHAGRAV 610
+ G + FAV K+SEGL+F+D R V
Sbjct: 711 AAQVCILIAHQRLQYKPAGLFYREQSVPSSDRKGGGLLFAVIGAKLSEGLNFSDDLARTV 770
Query: 611 VITGMPFATMTDPKVRLKREYLDL--QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
+I G+PFA + P++R + +Y+ + + + Q G++ + + + Y AVNQ+
Sbjct: 771 IIVGLPFANLGSPELRERMKYVKMLEEKRQQNGDFSKPAGQKDAAAELYENICMNAVNQS 830
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+GR IRHR+D+ +++ D R+A + ++++ WI + FG + L FF
Sbjct: 831 IGRAIRHRNDWASLLLLDRRYASATIRNKLPKWIGNRLVVTDTFGQSIKELASFF 885
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 13 FPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y Q+ M V ++++ K ++ESPTGTGKTL LLC++L W
Sbjct: 60 FPYDPPYAIQVDLMRHVYEAIEKKHVTIVESPTGTGKTLTLLCSSLTW 107
>gi|358057423|dbj|GAA96772.1| hypothetical protein E5Q_03443 [Mixia osmundae IAM 14324]
Length = 797
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 194/753 (25%), Positives = 332/753 (44%), Gaps = 104/753 (13%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP++ Y Q Y+ + ++L N +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDQLPVIFPYDRIYPEQYAYVCDLKRTLDAGGNCVLEMPSGTGKTVSLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
L +Y SRT ++ + + ELK YR
Sbjct: 63 YPERRKL----------------------------VYCSRTVPEIEKALAELKRLMEYRR 94
Query: 122 K--------MVI-LGSREQLCIHREVSL-LRGSAQNNACR-----FLCKKG-----TNRR 161
M + L SR+ LCIH +S +G + CR ++C+KG +
Sbjct: 95 AAGCNDDGFMALGLSSRKNLCIHPTISREKKGKVADAKCRDLTSAWVCEKGRADPGSVEL 154
Query: 162 CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
C H + ++ L +ED+ G G CPYF R + +V ++YL+
Sbjct: 155 CEFHENLGQ-LEPGTQLPPAVYTLEDVKAYGEQQGICPYFAVRRMLVHASVVIYSFHYLL 213
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTR 280
DP + + E K++I++FDEAHN++ +C ++ S DL+ +L + D +
Sbjct: 214 DPKVAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVTALTD--KIK 271
Query: 281 RGQSSDETLNPDNFAILRALLLKLEKRIAE--------VP---INSKELGFTKPGPYIYE 329
+ +D T D +A L L E E +P +N G + +
Sbjct: 272 EIRQTDATKLQDEYARLVEGLQGAEADQDENAFMGNPVLPDDILNEAVPGNIRRAEHFVA 331
Query: 330 LLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKIIFR 383
LA +T +++ +V E A LQ K KK C R+ S+ L++
Sbjct: 332 FLARFVEYLKTRMRVLHVVAEKPASFLQHLKDITFIEKKPLRFCAERLTSLVRTLELTRI 391
Query: 384 DKGTAHS--AYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRL 433
D+ +A S A + V D +L+ + C + +A++ F R
Sbjct: 392 DEFSALSKVASFATLVATYDKGFLLILEPFETENATVPNPIFHLCCLDASLAIKPVFDRF 451
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
S+++TSGT+SP++ + + L+ ++ +T ++ G ++S +
Sbjct: 452 --SSVVITSGTISPLEMYPKMLQFTATVQESYAMTLTRNCFLPLVITRGSDQVNISSRFE 509
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + G ++ A+ VPDG++ FFPSY M+ +A W + G L W K
Sbjct: 510 VRNDPAVVRNFGTILIEYAKAVPDGMVCFFPSYLYMESIVAAWHDM--GILNEAW----K 563
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
HK VE ++ +A+E+Y + GAV +V RGKVSEG+DF H GR V++
Sbjct: 564 HKLIFVETPDAAETSVALENYRRACDN--GRGAVLLSVARGKVSEGIDFDHHYGRCVIMF 621
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + E+L + + + +Y L+F A R Q VGRV+
Sbjct: 622 GIPYQYTESRILKARLEFLRDEHRIRENDY----LTF---------DAMRHAAQCVGRVL 668
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + DYG ++F D RFA +++++ WI +I
Sbjct: 669 RGKTDYGLMVFADRRFAKADKRAKLPKWINHYI 701
>gi|449664165|ref|XP_002163452.2| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Hydra magnipapillata]
Length = 759
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 199/771 (25%), Positives = 335/771 (43%), Gaps = 103/771 (13%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP + Y Q YM ++ ++L K + LLE P+GTGKT+ L+ +A+ K
Sbjct: 5 IDGLLVLFPHDFIYPEQYSYMLELKRTLDAKGHCLLEMPSGTGKTVSLISLIVAYIKE-- 62
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQV--IQELKTSNYRP- 121
L +Y SRT ++ +V L Y+
Sbjct: 63 -------------------------RPHHLSKFVYCSRTVPEIEKVYNFXXLLIEFYKKE 97
Query: 122 -----KMV--ILGSREQLCIHREVSLLRGSAQ-NNACRFLCKKGTNRR--CNHHSRVADY 171
KMV L SR+ LCIH EV L+ Q + C L R + + V +
Sbjct: 98 TGQDLKMVGLALSSRKNLCIHPEVKNLKDGKQVDGKCHTLTASFVRTRYQADKQTPVCQF 157
Query: 172 MKNNPHLG-DEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+N G +EP+ ++EDL G G CPYFM R +IV Y+YL+DP
Sbjct: 158 YENFDSFGREEPLPSGIYNLEDLKQYGEEIGCCPYFMARHAISLANIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS 284
+ + K+S ++FDEAHN++ +C D+ + ++ L C S + R +
Sbjct: 218 ADLVSKSFPKSSAVVFDEAHNIDNVCIDSMTVHINRRTLDKCHSNIDKLAE-HVQRIKMT 276
Query: 285 SDETLNPDNFAILRALLLKLEKRIAEVPINSKEL----------GFTKPGPYIYELLADL 334
+ LN + +++ L E R + + + L G + + +
Sbjct: 277 DAKKLNGEYERLVQGLREAQEARETDQYLGNPVLPDAVLEEAVPGNIRQAEHFIAFMRRF 336
Query: 335 NITQETAYKLIDIV-EVAAELLQEDKLQ---NKKSTTAC--RIESISNILKI--IFRDKG 386
+T ++ +V E LQ Q +K C R+ S+ N L++ I G
Sbjct: 337 VEYLKTRLRIQHVVSETPPSFLQHIHQQVCIERKPLRFCSERLRSLLNTLELPDITDYSG 396
Query: 387 TAHSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEVGSI 438
+ A + V +++ +T + + C + +A++ F R + S+
Sbjct: 397 LSLVANFATLVSTYSKGFVLIIEPFDDQTPTIPNPIIHFCCLDASVAIKPVFERFQ--SV 454
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ-IWAGIVPVGPSGYLLNSSYRNRDS 497
++TSGTLSP+D + + L P+ + + ++Q + I G ++SS++ RD
Sbjct: 455 VITSGTLSPVDMYPKLLDFQ-PVNMSTFTMTLARQCVLPIICSKGNDQVAISSSFQTRDD 513
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
+ + GN +V ++ VPDG+ FF SY M+ ++ W + I I K+K
Sbjct: 514 MAVIRNYGNLLVEMSASVPDGIACFFVSYLYMETVVSIWHDQG------IISNIQKNKLL 567
Query: 558 VVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
+E + LA+ +Y ++ GA+ +V RGKVSEG+DF H GRAV++ G+P+
Sbjct: 568 FIETQDGPETALALYNYQKACENGR--GAILLSVARGKVSEGIDFDHHYGRAVIMFGIPY 625
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
++ + E+L Q + D+ A R Q VGR +R +
Sbjct: 626 VYTQSRILKARLEFLRDQFN-------------IRENDFLTFDAMRHAAQCVGRAMRGKT 672
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHIQ---CYSKFGDVVYTLTRFFRE 725
DYG + F D+RF+ +K ++ WIQ H++ C + V RF R+
Sbjct: 673 DYGIMCFADKRFSKADKKGKLPKWIQEHLKPCNCNLSIDEAVQVSKRFLRQ 723
>gi|426200162|gb|EKV50086.1| hypothetical protein AGABI2DRAFT_183219 [Agaricus bisporus var.
bisporus H97]
Length = 792
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 199/781 (25%), Positives = 358/781 (45%), Gaps = 119/781 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
+ L +Y SRT ++ + + ELK YR
Sbjct: 63 YPTKRKL----------------------------IYCSRTVPEIEKALTELKRLMKYRE 94
Query: 122 KMVI---------------LGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKG--- 157
+ L SR+ LCI+ EVS +G + CR L C+KG
Sbjct: 95 EAAESEEEKIKERNYMGLGLTSRKNLCINPEVSREKKGKVVDARCRDLTNSAVCEKGRAD 154
Query: 158 --TNRRCNHHSRVADYMKNNP-HLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIV 213
+ C+ H + K P HL I + D+++ G+ CPYF R + VD V
Sbjct: 155 PGSVELCDWHENLG---KMEPGHLMPAGIWTLADVLDYGKEQRICPYFAVRRMMPFVDAV 211
Query: 214 FAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE--- 269
++YL+DP + + E K+SI++FDEAHN++ +C ++ S DL+ +L + +
Sbjct: 212 IYSFHYLLDPKVAEQVSKEMSKDSIVVFDEAHNIDNVCIESLSIDLTRPMLDSAVRSVTK 271
Query: 270 -AKNCIDISSTRRGQSSDETLN-------PDNFAILRAL---LLKLEKRIAEVPINSKE- 317
+ ++ +T + DE PD+ AL +L + +P N ++
Sbjct: 272 LGEKIEEVKTTDAAKLQDEYAKLVEGLQEPDDSDTDNALANPVLPEDILKEAIPGNIRKA 331
Query: 318 ---LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQNK-KST 366
+ F K Y+ + L++ ET + DI + L+ ++LQ+ ++
Sbjct: 332 EHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLIRTL 391
Query: 367 TACRIESISNILKI-IFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
R++ S++ K+ F + + + + + + A V + + C +P +
Sbjct: 392 ELSRLDEHSSLQKVATFATLVATYEKGFLLILEPFETDNATV----PNPIFHFTCLDPSL 447
Query: 426 AMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
A++ F R S+++TSGT+SP+D + + L+ ++ +T ++ G
Sbjct: 448 AIKPVFERF--SSVVITSGTISPLDMYPKMLQFTPVVQETYSMTLTRNAFLPLVITRGSD 505
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
++S + R+ + G+ +V ++IVPDG++ FFPSY M+ +A W + G L
Sbjct: 506 QVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GIL 563
Query: 545 TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W KHK VE ++ +A+E+Y + GAV +V RGKVSEG+DF
Sbjct: 564 NEVW----KHKLIFVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSEGIDFDH 617
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
+ GRAV++ G+P+ ++ + EYL + + E+ L F A R
Sbjct: 618 NYGRAVLMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LGF---------DAMRN 664
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYTLTRF 722
Q VGRV+R + D+G ++F D+RFA +++++ WI +I + S D+ TL++
Sbjct: 665 AAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMAITLSKL 724
Query: 723 F 723
F
Sbjct: 725 F 725
>gi|405118752|gb|AFR93526.1| CHL1 helicase [Cryptococcus neoformans var. grubii H99]
Length = 853
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 189/706 (26%), Positives = 310/706 (43%), Gaps = 125/706 (17%)
Query: 90 GDSKLPTILYTSRTHSQLRQVIQEL-KTS----------------NYRPKMVILGSREQL 132
G+ +P + YTSRTH+QLRQ+ EL KTS ++ +V LGSR+QL
Sbjct: 210 GEDDVPKVYYTSRTHTQLRQLTSELLKTSFASYDSVPESPSAEAPSHGVSLVPLGSRKQL 269
Query: 133 CIHREVSLL--RGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDL 188
CI+ ++ L +G + N AC + K G RC AD + +D+ D
Sbjct: 270 CINEKIRALARKGGDERMNEACLDMQKSG-KARCEFLPAKADEITM--------LDVRD- 319
Query: 189 VNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEG 248
T+ IV PYN L+ R+ LG++ KN +++ DEAHNL
Sbjct: 320 --------------------TILIVTLPYNLLLQKNSREALGIKLKNQVVVIDEAHNLID 359
Query: 249 ICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI 308
L+S L +S+ + TR +S ++LR L+ +K I
Sbjct: 360 TLLSIHCTTLTSTNLANAMSQLQQYHQRFKTRL-KSIHFLWIQQVLSLLRGLIRVCDKFI 418
Query: 309 AEVPINSKELG-FTKPGPYIY-------------------ELLADLNITQETAYKLIDIV 348
+ KE G KP + EL+A L ++ A K+
Sbjct: 419 QDAKAQRKESGPVGKPKAEVLDVNTLMRRIGGGSDQVNPIELVAYLKESK-LARKINGFF 477
Query: 349 EVAAELLQEDKLQNKKSTTA--CRIESISNILKIIF-----RDKGTAHSAYYRVHVREAD 401
E AE ++ +S TA I + N+ + +D G R+ + D
Sbjct: 478 EHVAEQAALKDVKTSRSATARHASITAFHNVESFLLSLVDAKDDG-------RILLSIDD 530
Query: 402 ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
N ++ + + + NP +E E S+IL GT+ P+ F Q+L + P
Sbjct: 531 LNESEPVV-----VIKYVLLNPSERFKEVVE-EARSVILAGGTMEPITDFLQQLFPSIPK 584
Query: 462 ----RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD 517
+ HVI + + +V VGP + NR+ +LG + +VPD
Sbjct: 585 DRLSTLSCSHVIPKENLLTQVVSVGPRKSEFEFKFGNRNDEALLTDLGAVLQATIGVVPD 644
Query: 518 GLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAK 577
G+++F PSY +D+ A W + + +R+ + K+ EP+ S + DY
Sbjct: 645 GVVVFLPSYAFLDKVRALWTKSG------LLQRLGERKQLFYEPQTSGDVETILRDYALA 698
Query: 578 LKD---TST-------SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRL 627
+ TST +GA+ FAV GK+SEG++F+D+ GR V++ G+PFA ++ +++
Sbjct: 699 ISSCYATSTAGQKSRKTGALMFAVVGGKLSEGINFSDNLGRCVIMVGLPFANVSSVELQE 758
Query: 628 KREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCD 686
+ Y++ + SQG + + Y RAVNQ++GR IRH +DY I+ D
Sbjct: 759 RMRYVETIPGASQG-----------ASREMYENLCMRAVNQSIGRAIRHANDYATILLVD 807
Query: 687 ERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGST 732
+R+A ++++ WI ++ FG V + FF+E++ G T
Sbjct: 808 KRYATSRIRNKLPKWIGEDVKVPQDFGGVARGVAAFFKEKKDRGLT 853
>gi|350631746|gb|EHA20117.1| ATP-dependent DNA helicase-like protein [Aspergillus niger ATCC
1015]
Length = 987
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 191/686 (27%), Positives = 297/686 (43%), Gaps = 88/686 (12%)
Query: 87 SQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY---------------------RPKMVI 125
S D+ I Y SRTHSQL Q EL+ R K V
Sbjct: 181 SDDADNDEVKIFYCSRTHSQLTQFAGELRRVKMPWSIPKDLLSTDLTGEEELEERVKHVT 240
Query: 126 LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTN--RRCNHHSRVAD---YMKNNPHLG 179
LGSR+ LCI+ VS L +A N C L + N RC D ++ H
Sbjct: 241 LGSRKNLCINPRVSSLENATAINERCLDLQQPNVNPQHRCPFLPSKEDERQVLQFRDHAL 300
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILI 239
DIEDL +G+ G CPY+ +R + K ++ R+ L + K ++I
Sbjct: 301 STVKDIEDLGKLGKKIGICPYYASRSVVKDSEVS------------REALNLSVKGHVII 348
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
DEAHNL ++ S ++ L +S+ T G+ L N + + A
Sbjct: 349 IDEAHNLMDAISNIHSVTVTLSQLQTSLSQL--------TIYGRKFKTRLKGKNRSYV-A 399
Query: 300 LLLKLEKRIAEVPINSKELGFTKPGP-YIYELLADLNITQETAYKLIDIVEVAAELLQED 358
+++L IA + E G GP I EL++ + Q YKL + LQE
Sbjct: 400 QVIRLLSSIAAHLRSLLESGKAPEGPVLISELMSGKGVDQINPYKL-------SRYLQES 452
Query: 359 KLQNK-------KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVL--- 408
KL K + + S S + ++F +G S + +A L
Sbjct: 453 KLARKVDGYVEFTRDPSDKQASRSPTVPVLFHIQGFLLSL--------MNPSAEGRLFYS 504
Query: 409 KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL-RVEN-- 465
K + L + +P +E + +IIL GT+SPM + L P R++
Sbjct: 505 KEQGDIQLKYMLLDPTNQFRELVE-DARAIILAGGTMSPMTDYMNHLFSYVPASRLDMFS 563
Query: 466 -PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
HVI + + A + G G + +Y RDS + +LG TI + ++PDG++ FFP
Sbjct: 564 YGHVIPPENLIAHTLVRGVQGSEFDFTYDARDSEKMIMDLGRTIATLCHVIPDGVVAFFP 623
Query: 525 SYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--S 582
SY + + + WK G + KKP++ +S + E+ + +T S
Sbjct: 624 SYDYLGRVLNIWKKPMLGEQGQTVYNLIGQKKPILS--ESRDMTVTTEELLHTYANTVDS 681
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ--G 640
GA+ +V GK+SEG++F+D GR V+I G+PF + + K +Y++ + Q G
Sbjct: 682 GRGALLLSVVGGKLSEGINFSDKLGRGVLIVGLPFPNIRSAVWQAKIQYIEQKTHQQATG 741
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL 700
E + +G D+Y RAVNQ +GR IRHR+DY AI+ D R+ P ++++
Sbjct: 742 SEASRQLAAKAAGRDFYENSCMRAVNQCIGRAIRHRNDYAAIVLVDRRYEKPGIQAKLPA 801
Query: 701 WIQPHIQCYS---KFGDVVYTLTRFF 723
WI+ + S G V +L +FF
Sbjct: 802 WIKQSMVGSSVQRPAGATVQSLAKFF 827
>gi|301756631|ref|XP_002914172.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like [Ailuropoda melanoleuca]
Length = 908
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 175/698 (25%), Positives = 306/698 (43%), Gaps = 91/698 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC-- 150
I Y SRTHSQL Q + E++ S + ++V LGSR+ LCI+ +V L SAQ N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCINEDVKTL-SSAQLINDRCME 287
Query: 151 ----------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-----DIEDLVNIGRTF 195
R +K RR H + Y HL + + DIE LV +G+
Sbjct: 288 MQRSKHGKKNRAEEEKPKRRRQEHRAACPFYSYEQLHLLRDQVLVGVKDIEQLVALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ + +++ DEAHNL S
Sbjct: 348 RACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQVVLIDEAHNLIDTITSIHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N ++ +L LEK + + N
Sbjct: 408 AEVSGAQLCQAHSQLLQYMERYGKR--------LKAKNLMYVKQILYLLEKFVTVLGGNI 459
Query: 316 KELGFTKP-----------GPYIYELLAD-LNITQETAY--------KLIDIVEVAAELL 355
K+ T+ +++E D +N+ + Y KL E +L
Sbjct: 460 KQNPNTQSLSQTGTELKTINDFLFESQIDNINLFKVRRYWEKSMISRKLFGFTERYGTVL 519
Query: 356 QEDKLQNKKSTTACRIESI------SNILKIIFRDKGTAHSAYYRVHVRE-------ADA 402
+ Q + + ++S+ + + + + G A +H+ A+
Sbjct: 520 AASREQPRLAGFQHFLQSLQPAVTKTPVTPVEEGEAGVPRLASPLMHIESFLAALTTANQ 579
Query: 403 NAADVLKGKAS---RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
+ +L + S +L + NP + + + E ++++ GT+ P+ F ++L
Sbjct: 580 DGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFREQLLACA 638
Query: 460 PLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
+ E HVI + I ++ GPS L +Y+ R+ + E G + N+
Sbjct: 639 GVEAERVVEFSCGHVIPPENILPLVICSGPSSQQLEFTYQKRELPQMMDETGRILCNLCT 698
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
+VP G++ FFPSY Q A W + + R+ KK EP++++ + +
Sbjct: 699 VVPGGVVCFFPSYEYQRQVYAHWDKSG------LLARLAVRKKIFQEPKRANQVEQVLME 752
Query: 574 YMAKLK-----DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
Y +K + +GA+ +V GK+SEG++F+D+ GR VV+ GMP+ + P+++ K
Sbjct: 753 YSRCIKCCGQAGGTVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPYPNIKSPELQEK 812
Query: 629 REYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
YLD G+ K +AVNQ++GR IRH+ D+ +I+ D+R
Sbjct: 813 MAYLDQTLPRGPGQPPPGK-------ALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQR 865
Query: 689 FAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
+A PS ++ WI+ ++ + FG + +F RE+
Sbjct: 866 YARPSILGKLPAWIRDRVEVKATFGLAFAAMRKFHREK 903
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T ++ GI FPF Y Q +M ++ Q L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQEVGGIHFPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|409082328|gb|EKM82686.1| hypothetical protein AGABI1DRAFT_118129 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 792
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 199/781 (25%), Positives = 358/781 (45%), Gaps = 119/781 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
+ L +Y SRT ++ + + ELK YR
Sbjct: 63 YPTKRKL----------------------------IYCSRTVPEIEKALTELKRLMKYRE 94
Query: 122 KMVI---------------LGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKG--- 157
+ L SR+ LCI+ EVS +G + CR L C+KG
Sbjct: 95 EAAESEEEKIRERNYMGLGLTSRKNLCINPEVSREKKGKVVDARCRDLTNSAVCEKGRAD 154
Query: 158 --TNRRCNHHSRVADYMKNNP-HLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIV 213
+ C+ H + K P HL I + D+++ G+ CPYF R + VD V
Sbjct: 155 PGSVELCDWHENLG---KMEPGHLMPAGIWTLADVLDYGKEQRICPYFAVRRMMPFVDAV 211
Query: 214 FAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE--- 269
++YL+DP + + E K+SI++FDEAHN++ +C ++ S DL+ +L + +
Sbjct: 212 IYSFHYLLDPKVAEQVSKEMSKDSIVVFDEAHNIDNVCIESLSIDLTRPMLDSAVRSVTK 271
Query: 270 -AKNCIDISSTRRGQSSDETLN-------PDNFAILRAL---LLKLEKRIAEVPINSKE- 317
+ ++ +T + DE PD+ AL +L + +P N ++
Sbjct: 272 LGEKIEEVKTTDAAKLQDEYAKLVEGLQEPDDSDTDNALANPVLPEDILKEAIPGNIRKA 331
Query: 318 ---LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQNK-KST 366
+ F K Y+ + L++ ET + DI + L+ ++LQ+ ++
Sbjct: 332 EHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLIRTL 391
Query: 367 TACRIESISNILKI-IFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
R++ S++ K+ F + + + + + + A V + + C +P +
Sbjct: 392 ELSRLDEHSSLQKVATFATLVATYEKGFLLILEPFETDNATV----PNPIFHFTCLDPSL 447
Query: 426 AMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
A++ F R S+++TSGT+SP+D + + L+ ++ +T ++ G
Sbjct: 448 AIKPVFERF--SSVVITSGTISPLDMYPKMLQFTPVVQETYSMTLTRNAFLPLVITRGSD 505
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
++S + R+ + G+ +V ++IVPDG++ FFPSY M+ +A W + G L
Sbjct: 506 QVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GIL 563
Query: 545 TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W KHK VE ++ +A+E+Y + GAV +V RGKVSEG+DF
Sbjct: 564 NEVW----KHKLIFVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSEGIDFDH 617
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
+ GRAV++ G+P+ ++ + EYL + + E+ L F A R
Sbjct: 618 NYGRAVLMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LGF---------DAMRN 664
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYTLTRF 722
Q VGRV+R + D+G ++F D+RFA +++++ WI +I + S D+ TL++
Sbjct: 665 AAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMAITLSKL 724
Query: 723 F 723
F
Sbjct: 725 F 725
>gi|348564904|ref|XP_003468244.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cavia porcellus]
Length = 908
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 173/699 (24%), Positives = 305/699 (43%), Gaps = 92/699 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC-- 150
I Y SRTHSQL Q +QE++ S + ++V LGSR+ LC++ +V L G+ Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVQEVQKSPFGKDTRLVTLGSRQNLCVNEDVRSL-GAVQLINDRCME 287
Query: 151 ----------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-----DIEDLVNIGRTF 195
R +K RR + Y + L + I D+E LV +GR
Sbjct: 288 MQRSPHENKNRAEAEKPKRRRQEGRTACPFYNREQTQLLRDEILVAARDMEQLVALGREA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL D S
Sbjct: 348 RACPYYGSRLAVPVAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITDIHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N ++ +L LE+ +A + N
Sbjct: 408 TEVSGSQLCQAHSQLLQYMERYRKR--------LKAKNLMYIKQILYLLEQFVAVLGGNI 459
Query: 316 KELGFTKP-----------GPYIYELLAD-LNITQETAY--------KLIDIVEVAAELL 355
K+ T+ ++++ D +N+ + Y KL E +L
Sbjct: 460 KQNPNTQSLSQTGTELKTINDFLFQSQVDNINLFKVQRYFEKSKVSRKLCGFTERYGAIL 519
Query: 356 QEDKLQNKKSTTACRIESIS--------------NILKIIFRDKGTAHSAYYRVHVREAD 401
+ Q++ + ++S+ ++ + H + + A+
Sbjct: 520 PPSREQSRLAGLQQFLQSLQPGVTETPAAAPPEEAEVEAMRAASPLMHIEGFLTALTTAN 579
Query: 402 ANAADVLKGKASRTLSWWCF---NPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN 458
+ +L + S + S F NP + + + E ++++ GT+ P+ F ++L
Sbjct: 580 QDGRVILSRQGSLSQSSLKFLLLNPAVQFAQVVK-ECRAMVIAGGTMQPVSDFREQLLAW 638
Query: 459 FPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
+ E HVI I ++ GP+G L +++ R+ +E G + N+
Sbjct: 639 AGTQSERVVEFSCGHVIPPDNILPLVLCSGPTGQQLEFTFQQRELPAMMEETGRILCNLC 698
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIE 572
+VP GL+ FFPSY Q +A W + + R+ KK EP+++S +
Sbjct: 699 NVVPGGLVCFFPSYEYQRQVLAHWDKSG------LLARLTVRKKLFQEPKRASQVEQVLS 752
Query: 573 DYMAKLKDTS-----TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRL 627
Y +K +GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++
Sbjct: 753 AYSKCIKRCGQAGGPVTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIRSPELQE 812
Query: 628 KREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDE 687
K YLD + G+ G+ +AVNQ++GR IRH+ D+ +I+ D+
Sbjct: 813 KMAYLDQRLPRSPGQVP-------PGKALLENLCMKAVNQSIGRAIRHQRDFASIVLLDQ 865
Query: 688 RFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
R+ P +++ WI+ ++ + FG L +F RE+
Sbjct: 866 RYTRPPVLAKLPAWIRDRVEVKATFGAAFAALRKFHREK 904
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 8 GIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
GID FPF Y Q +M K+ L+ + ESPTGTGK+L L+C L W
Sbjct: 10 GIDFPFPFPPYSIQKDFMAKLYHVLEAGKIGIFESPTGTGKSLSLICGALTW 61
>gi|294659657|ref|XP_462055.2| DEHA2G12056p [Debaryomyces hansenii CBS767]
gi|199434130|emb|CAG90541.2| DEHA2G12056p [Debaryomyces hansenii CBS767]
Length = 794
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 200/758 (26%), Positives = 335/758 (44%), Gaps = 115/758 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPILFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTISLLSITVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + ++Y SRT S++ + + EL +R
Sbjct: 60 -------------------------QMHYPEHRKVVYCSRTMSEIEKALIELHNLMKFRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRF-----LCKK---------- 156
+ + L SR+ LC+H +S R G + CR L KK
Sbjct: 95 EQLGYVEEFRGLGLSSRKNLCLHPTISKERKGIVVDEKCRRVTNGQLKKKIENGLINTEQ 154
Query: 157 ----GTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
N C+ H + + ++N + + L+N + G CPYF R + +I
Sbjct: 155 TQDPEANALCSFHESLNEMDQHN-LIPAGVYSFDALINHCKEVGTCPYFTVRRMIPFCNI 213
Query: 213 VFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
+ Y+YL+DP + E K+SI+IFDEAHN++ +C ++ S DL+ L A
Sbjct: 214 IIYSYHYLLDPKIADRVSKEISKDSIIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGAN 273
Query: 272 NCIDISSTRRGQSSDETLNPDNFAI--LR-ALLLKLEKRIAEVPINSKEL------GFTK 322
D + Q S++ N + LR A + + E+ P ++L G +
Sbjct: 274 KLGDAVDDMKSQDSEKLQNEYEKLVEGLRQAEIARDEELFMSNPTLPQDLLDEAIPGNIR 333
Query: 323 PGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISN 376
+ L +T K++ ++ E LQ K ++K C R+ +
Sbjct: 334 KAEHFISFLKRFIEYLKTRMKVLHVISETPISFLQHLKDLTFIDRKPLKFCSERLSLLVR 393
Query: 377 ILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIAM 427
L++ + TA A + V D +L+ + L + C + IA+
Sbjct: 394 TLELSEIEDFTALKDIATFATLVSTYDTGFQLILEPFETEGSTVPNPILHFTCLDASIAI 453
Query: 428 QE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGPS 484
+ F R S+I+TSGT+SP+D + + LNF ++ + +T + IV G
Sbjct: 454 KPVFERF--SSVIITSGTISPLDMYPK--MLNFQTVIQESYTMTLARRSFLPMIVTKGSD 509
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
++S + R+ + G+ ++ A+IVPDG+++FFPSY M+ I+ W+N G L
Sbjct: 510 QVSISSRFEIRNDPSVVRNYGSLLIEFAKIVPDGMVVFFPSYLYMESIISMWQNM--GVL 567
Query: 545 TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W K+K +VE + LA+E Y ++ GA+ +V RGKVSEG+DF
Sbjct: 568 DEVW----KYKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGKVSEGIDFDH 621
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
H GR V++ G+PF ++ + E+L Q + ++ LSF A R
Sbjct: 622 HYGRTVLMIGIPFQYTESRILKARLEFLRDHYQIRENDF----LSF---------DAMRH 668
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q +GRV+R + DYG ++ D RF+ +K+Q+ WI
Sbjct: 669 AAQCLGRVLRGKDDYGIMVLADRRFSR--KKNQLPKWI 704
>gi|345487716|ref|XP_001605873.2| PREDICTED: Fanconi anemia group J protein homolog [Nasonia
vitripennis]
Length = 950
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 181/330 (54%), Gaps = 33/330 (10%)
Query: 410 GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI 469
G+ RT+ + C N I + +R +IL SGTLSP +F EL F ++ HV+
Sbjct: 635 GRRLRTIKFMCMNSAIVFSQMARA-TRCVILASGTLSPTSTFESELGTKFVHKLHANHVV 693
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
Q++ + GP G L ++Y+N + +K +LG ++++ + VP G+L FF SY +M
Sbjct: 694 PRDQVYVRGIASGPKGTTLRATYKNVQMLPFKDDLGRLVLDVCQTVPHGVLCFFSSYSMM 753
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT-------- 581
I WK T IW + + K V EPR ++ +ED M + +D
Sbjct: 754 LSQIDRWKETD------IWYELQQCKHIVQEPRSNN----DLEDIMREFRDVIRETADRE 803
Query: 582 ---STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
+GA+ FAV RGKV+EG+DF+D+ RAV+ G+P+A DP+V+LKREY D+ ++
Sbjct: 804 AACGINGALLFAVFRGKVAEGIDFSDNEARAVLTIGIPYAVQNDPQVKLKREYNDMH-RN 862
Query: 639 QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
+G L G +WY+ QA RA+NQA+GR IRHR+D+GA++ DER P + +
Sbjct: 863 KG---------LLPGGEWYSVQAYRALNQALGRCIRHRNDWGAVLLVDERLMWPDSINYL 913
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREERI 728
WI+ ++ D+ L F +E++I
Sbjct: 914 PKWIR-EMRREGAIYDLKSELKEFVKEQKI 942
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 146/293 (49%), Gaps = 32/293 (10%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I G+ V+FP Y Q+ M VI+ + K + LLESPTG+GKTL LLCA L W++S
Sbjct: 175 IAGVPVKFPVSPYRSQISVMNAVIKGCKGKEHCLLESPTGSGKTLALLCAALGWQESFEQ 234
Query: 66 FSTLGS--QVNNQISGSQSSV----------------NSSQSGDSKLPTILYTSRTHSQL 107
L + ++ N S + + ++ + K+P I Y SRTH Q+
Sbjct: 235 SHLLDAAKKLRNHDPDDPSGLCQPGKSVDDWKAIEFDETKEANEKKIPKIYYGSRTHKQI 294
Query: 108 RQVIQELKTSNYRPK-MVILGSREQLCIHREVSLLRGSAQNNACRFLC----KKGTNRRC 162
QVI+E + + Y K M IL SRE CI S ++G ++ C L K G
Sbjct: 295 EQVIREFRKTAYAHKNMTILSSREHTCIQ---SPVKGISKTQLCNNLLDPAKKTGGCEYY 351
Query: 163 NHHSRVADYMKNNPHLGD----EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYN 218
+++ A + N L P DIEDLV++G+ CPYF R L DI+F PYN
Sbjct: 352 KENNKQA--ISCNSALSSCGLKTPWDIEDLVDLGKQEKACPYFAARALMAEADIIFCPYN 409
Query: 219 YLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
YLIDP R+ + + ++I DEAHN+E IC D S D L I + K
Sbjct: 410 YLIDPVIRETMKINLNGDVVIVDEAHNIESICRDVGSADFREDNLGEAIEDCK 462
>gi|170087262|ref|XP_001874854.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650054|gb|EDR14295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 759
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 193/768 (25%), Positives = 355/768 (46%), Gaps = 89/768 (11%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK 122
+ ++ +V + ++L ++ +H++ E K
Sbjct: 63 YPT--------RRKLVYCSRTVPEIEKALAELKRLMAYRISHAE----TPEEKEKERSFM 110
Query: 123 MVILGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKG-----TNRRCNHHSRVADY 171
+ L SR+ LCIH E+S +G + CR L C+KG + C+ H +
Sbjct: 111 GMGLTSRKNLCIHPEISKEKKGRVVDARCRDLTNAAVCEKGRADPDSVELCSWHEELGKL 170
Query: 172 MKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTV--DIVFAPYNYLIDPWFRKG 228
N L + I + D++ GR G CPYF R + D++ ++YL+DP +
Sbjct: 171 EPGN--LIPQGIWTLADILEYGRDKGVCPYFAVRRMASMAFADVIIYSFHYLLDPKVAEQ 228
Query: 229 LGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA--------KNCIDISST 279
+ E K++I++FDEAHN++ +C ++ S DL+ +L + + I I+
Sbjct: 229 VSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSATRSVVKLGEKIEEQVIKITDA 288
Query: 280 RRGQSS--------DETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PY 326
+ Q E D A + LL + VP N ++ + F K Y
Sbjct: 289 AKLQDEYAKLVEGLQEPGGEDGDAFMGNPLLPEDLLNEAVPGNIRKAEHFVAFLKRFVEY 348
Query: 327 IYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQNKKSTTAC-RIESISNILK 379
+ + L++ ET + DI + L+ ++LQ+ T R++ +++ K
Sbjct: 349 LKTRMRVLHVVAETPLSFLQHLKDITYIERRPLRFCAERLQSLIRTLELNRLDEYASLQK 408
Query: 380 II-FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGS 437
+ F + + + + + + + A V + + C +P +A++ F R S
Sbjct: 409 VASFATLVSTYEKGFLLILEPFETDNATV----PNPIFHFTCLDPSLAIKPVFERF--SS 462
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+++TSGTLSP+D + + L+ ++ P +T ++ G ++S + R+
Sbjct: 463 VVITSGTLSPLDMYPKMLQFTPVVQETYPMTLTRNAFLPLVITRGSDQVAISSRFEVRND 522
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
+ G+ ++ ++IVPDG++ FFPSY M+ +A W + G L +W K+K
Sbjct: 523 PAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GILNEVW----KNKLI 576
Query: 558 VVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
VE ++ +A+E+Y + GAV +V RGKVSEG+DF + GRAV++ G+P+
Sbjct: 577 FVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGVPY 634
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
++ + EYL + + E+ L F A R Q VGRV+R +
Sbjct: 635 QYTESRILKARLEYLRDAYRIRESEF----LGF---------DAMRNAAQCVGRVLRGKT 681
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVVYTLTRFF 723
D+G +IF D+RFA +++++ WI +I + S D+ TL++ F
Sbjct: 682 DWGLMIFADKRFARADKRAKLPRWINQYITETASNLSTDMALTLSKLF 729
>gi|21961619|gb|AAH34517.1| Ercc2 protein [Mus musculus]
Length = 739
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 196/747 (26%), Positives = 333/747 (44%), Gaps = 117/747 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A+++ +
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRVIE 64
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMV 124
L S Q G+ KLP + +
Sbjct: 65 ELRKL------------LSFYEQQEGE-KLPFL-------------------------GL 86
Query: 125 ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD---YMKNNPHLGD 180
L SR+ LCIH EV+ LR G + C L + + + Y + + H
Sbjct: 87 ALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDIHGRQ 146
Query: 181 EPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-K 234
P+ +++DL +G G CPYF+ R ++V Y+YL+DP + E +
Sbjct: 147 MPLPAGIYNLDDLKALGHRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELAR 206
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTACISE----AKNCIDISSTRRGQSSDE--- 287
++++FDEAHN++ +C D+ S +L+ L C S K + I T + DE
Sbjct: 207 KAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRR 266
Query: 288 --------TLNPDNFAILRALLLKLEKRIAEVP--INSKE--LGFTKPG-PYIYELLADL 334
++ + A L +L E VP I + E LGF + Y+ L
Sbjct: 267 LVEGLREASVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQ 326
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKK-STTACRIESISNILKI----------IFR 383
++ QE+ + + L Q +Q K A R+ S+ + L+I +
Sbjct: 327 HVVQESPPAFL------SGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLA 380
Query: 384 DKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSII 439
+ T S Y + + + D + A+ L + C + +A++ F R + S+I
Sbjct: 381 NFATLVSTYAKGFTIIIEPFDDRTPTI----ANPVLHFSCMDASLAIKPVFERFQ--SVI 434
Query: 440 LTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIE 499
+TSGTLSP+D + + L + + + I+ G ++S + R+ I
Sbjct: 435 ITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIA 494
Query: 500 YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV 559
+ GN ++ ++ +VPDG++ FF SY M+ +A W I E I ++K +
Sbjct: 495 VIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQG------ILENIQRNKLLFI 548
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
E + + +A+E Y ++ GA+ +V RGKVSEG+DF H GRAV++ G+P+
Sbjct: 549 ETQDGAETSVALEKYQEACENGR--GAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVY 606
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
++ + EYL Q Q + ++ L+F A R Q VGR IR + DY
Sbjct: 607 TQSRILKARLEYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAIRGKTDY 653
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHI 706
G ++F D+RFA ++ ++ WIQ H+
Sbjct: 654 GLMVFADKRFARADKRGKLPRWIQEHL 680
>gi|149712588|ref|XP_001490646.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Equus
caballus]
Length = 906
Score = 209 bits (533), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 172/703 (24%), Positives = 302/703 (42%), Gaps = 103/703 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 228 IYYCSRTHSQLSQFVHEVQKSPFGKDTRLVSLGSRQNLCVNEDVRHL-GSVQLINDRCVE 286
Query: 153 LCKKGTNRRCNHHSRVADYMKNNPH-------------LGDEPI----DIEDLVNIGRTF 195
+ + R+ + P L DE + DIE LV +G+
Sbjct: 287 MQRNKHERKSEAEEEKPKKRRQEPRATCPFYNYEQLQLLRDEVLVEVKDIEQLVTLGKEA 346
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ + +++ DEAHNL S
Sbjct: 347 HACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQVVVIDEAHNLIDTITGIHS 406
Query: 256 FDLSSGLLTACISE-------------AKNCIDIS----------------------STR 280
++S L S+ AKN + I S R
Sbjct: 407 AEVSGSQLCQAHSQLLQYMERYGRRLKAKNLMYIKQILYLLEKFVTVLGGNIKQNPHSQR 466
Query: 281 RGQSSDETLNPDNFAILRAL----LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNI 336
Q+ E ++F L + L K+++ + ++ K GFT+ Y L
Sbjct: 467 LSQTGTELKTINDFLFLSQIDNINLFKVQRYCEKSMVSRKLFGFTEK--YGAVLAPSREQ 524
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVH 396
+ ++ + LQ + + K+ A E + L+ H +
Sbjct: 525 PRLAGFQ---------QFLQSLQPEVTKTPAAPVEEGEARALR---PSSPLMHIEGFLAA 572
Query: 397 VREADANAADVLKGKAS---RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ 453
+ A+ + +L + S +L + NP + + + E ++++ GT+ P+ F +
Sbjct: 573 LTTANQDGRVILSRQGSLSQSSLKFLLLNPAVPFAQVVK-ECRAVVIAGGTMQPVSDFRE 631
Query: 454 ELKLNFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNT 507
+L + E HVI I +V GPS L +Y+ R+ + E G
Sbjct: 632 QLLACAGVDAERVVEFSCGHVIPPDNILPLVVCSGPSNQQLEFTYQQRELPQMMTETGRI 691
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLF 567
+ N+ +VP G++ FFPSY Q A W + + R+ KK EP++++
Sbjct: 692 LCNLCNVVPGGVVCFFPSYEYQRQVHAHWDKSG------LLARLAVRKKIFQEPKRANQV 745
Query: 568 PLAIEDYMAKLK-----DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
+ +Y ++ ++ +GA+ +V GK+SEG++F+D+ GR VV+ GMP+ +
Sbjct: 746 EQVLLEYSKCIQCCGQMGSTMTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPYPNIKS 805
Query: 623 PKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
P+++ K YLD G+ G+ +AVNQ++GR IRH+ D+ +I
Sbjct: 806 PELQEKMAYLDQTLPRTPGQVP-------PGKALVENLCMKAVNQSIGRAIRHQKDFASI 858
Query: 683 IFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
+ D+R+A P +++ WI+ ++ + FG + + +F RE
Sbjct: 859 VLLDQRYARPPILAKLPAWIRDRVEIKTTFGPAIAAMRKFHRE 901
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T ++ I FPF Y Q +M ++ Q L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TPEVGDIHFPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|429963255|gb|ELA42799.1| DNA repair helicase (rad3) [Vittaforma corneae ATCC 50505]
Length = 747
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 212/777 (27%), Positives = 331/777 (42%), Gaps = 151/777 (19%)
Query: 4 YKIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I G+ + FP+E Y QL Y++ +++S+Q + L+E P+GTGKT+ LL T+++
Sbjct: 3 FLIDGVPIYFPYEKIYPEQLKYIKSLLKSIQTPGHVLIEMPSGTGKTVALLSCTVSY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLP-TILYTSRTHSQLRQVIQELKT-SNYR 120
Q++ + G +P I+Y SRT ++ + ++EL++ Y
Sbjct: 60 ---------QLHMKAKG--------------VPFKIVYCSRTLPEIDKALKELRSLVEYI 96
Query: 121 PKMVI-------LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMK 173
K V L R +CI++E L CR + N +C+ + A +
Sbjct: 97 KKHVSFDFLGVGLSKRGNMCINKEA--LGSFDVEITCRKMTNHFENMKCDFYENKATSIP 154
Query: 174 NNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW 233
+ D ++ +G G CPYF R D + PYNYLI+P + E
Sbjct: 155 YGVY------DFTEIKELGAKMGVCPYFFVRNHLPLFDCIIYPYNYLIEPSIFSIISKEL 208
Query: 234 -KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPD 292
K+S ++FDEAHN++ C +A S ++S L A S + I+ + Q D L +
Sbjct: 209 PKDSFVVFDEAHNIDSHCIEALSIEISRNTLEAA-SRIMSVIESKIKSKKQEIDRRLRKE 267
Query: 293 NFAILRALLLKLEKRIAEV-PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA 351
+ + + E I N EL PG N+ + + V V
Sbjct: 268 YELMFKTMEYTGENTIPHFFNTNKPELA---PG----------NLRNASHF-----VSVM 309
Query: 352 AELLQEDKLQNKKSTTACRIESISNILKII----FRDKGTAHSAYYRVHVR------EAD 401
L++ L+ K TT +ESI + ++ I F DK T R+ + E D
Sbjct: 310 KRLIE--FLKTKLKTTHLTVESIKSFIQSIKELTFIDKKTLSFVSQRMGIMVQSLGVEDD 367
Query: 402 --------ANAA-----------------DVLKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
AN D + G + L C + IAM +
Sbjct: 368 ELYKLLSIANFGTMLSIYSKGFSVIFEPYDTMSGVFNPVLRLSCLDASIAMSHVFK-NFR 426
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLL-------- 488
++I+TSGTLSP++ + + L VE + I+ G LL
Sbjct: 427 NVIITSGTLSPIEMYPKILNFVPSSIVEIGITLCRNSTSPLIITKGDDQMLLKNSKDDEY 486
Query: 489 -----------------NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+S+ R + GN I ++++IVPD +++FFPSY M++
Sbjct: 487 EMLEMQKSSMSQADGKITTSFALRADPSVVRNYGNLITSLSKIVPDNIVVFFPSYIYMEE 546
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
I W ++ + E I + K +E A+ +Y K D GAV F+V
Sbjct: 547 VITLWSESN------VMEEILQSKLVFIETPDFRETETALRNY-RKACDMG-RGAVLFSV 598
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG-GEYKETKLSF 650
RGKVSEG+DF GRAVV+ G+PF M VRLK E L Q G EY+ F
Sbjct: 599 ARGKVSEGVDFEHGYGRAVVMLGVPF--MYTESVRLK-ERLKYMRQEHGIKEYE-----F 650
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
L + A R Q +GRV+R++ DYG +I D+RF S+ S++ WIQ I+
Sbjct: 651 LVFD------AMRHAAQCLGRVLRNKTDYGLMIMADQRFGAQSKISKMPKWIQERIE 701
>gi|212531953|ref|XP_002146133.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
gi|210071497|gb|EEA25586.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
Length = 794
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 198/756 (26%), Positives = 339/756 (44%), Gaps = 113/756 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+KI ++V FP+ + Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FKIDELEVLFPYPKIYPEQWQYMCDLKKALDASGHCVLEMPSGTGKTVTLLSLIVAYQQ- 61
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
GDS+ ++Y SRT S++ + + ELK YR
Sbjct: 62 -------------------------HHGDSR--KLIYCSRTMSEIDKALHELKALMKYRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLRGSAQNNA-CRFLC--------KKGTN-RRC 162
+ + L SR+ LC+H V + A +A CR L ++G + C
Sbjct: 95 SQLGYTEDFRGLGLSSRKNLCLHPSVKREKSGAVVDARCRSLTASFVVQKKERGEDVETC 154
Query: 163 NHHSRVADYMKNNPHLGDEP--IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
+H + D ++ PH EP DL+ + CPYF R + +++ Y+YL
Sbjct: 155 TYHDNL-DLLE--PHNLIEPGVFTFGDLLRYCQEKVTCPYFTVRRMLPYCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + + E K+ I++FDEAHN++ + ++ S DL+ L AKN ++
Sbjct: 212 LDPKIAERVSRELSKDCIVVFDEAHNIDNVAIESLSIDLTEDSLRKASRGAKN-LERKIE 270
Query: 280 RRGQSSDETLNPDNFAILRALLLKLEKR----IAEVPINSKEL-GFTKPGP--------- 325
S E L + ++ L E R I P+ ++L PG
Sbjct: 271 EMKSSDAEKLQSEYTKLVEGLKATEEARDEDLIMSNPVLPQDLLSEAVPGNIRRAEHFIA 330
Query: 326 ----YIYELLADLNITQETAYKLIDIVEVAAELL----QEDKLQNKKSTTACRIESISNI 377
+I L+ + +T + ++ EL+ + + +++ T+ R + NI
Sbjct: 331 FLQRFIQYLMTRMKVTHTISETTPSFLQHLRELVFIEAKPLRFCSERLTSLVRTLELMNI 390
Query: 378 LKI-------IFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEF 430
+F + + + + + ++ AA V + L C + IA +
Sbjct: 391 EDYQPLQEVAMFATLVSTYDRGFLLILEPFESEAATV----PNPVLHLACLDAAIAFRPV 446
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNS 490
SI++TSGTL+P+D F + L L+ + + IV G ++S
Sbjct: 447 VE-RFSSIVVTSGTLTPLDMFPKMLNFTPVLQESYTMTLARRSFLPMIVTRGSDQSQISS 505
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
S++ R+ + G+ +++ A+IVPDG+++FFPSY M+ + W + G L IW
Sbjct: 506 SFQTRNDPSNLRNFGSLLLDFAKIVPDGIVVFFPSYLYMESTLHVW--SGMGILDMIW-- 561
Query: 551 ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV 610
+K +VE + LA+E Y + + GA+ +V RGKV+EG+DF GRAV
Sbjct: 562 --NYKLILVETPDAQESSLALETY--RTACCNGRGAILMSVARGKVAEGVDFDHQYGRAV 617
Query: 611 VITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
+ G+PF +R + E+L + G + LSF A R +Q +G
Sbjct: 618 ICIGVPFQYTESRILRARLEFL----RENYGIRENDFLSF---------DAMRHASQCLG 664
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
RVIR + DYG ++ D+RFA ++SQ+ WI +I
Sbjct: 665 RVIRGKDDYGIMVLADKRFAR--KRSQLPKWISQNI 698
>gi|84997393|ref|XP_953418.1| helicase [Theileria annulata strain Ankara]
gi|65304414|emb|CAI76793.1| helicase, putative [Theileria annulata]
Length = 951
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 172/315 (54%), Gaps = 14/315 (4%)
Query: 418 WW-CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL---KLNFPLRVENPHVITSKQ 473
W+ C P SIILTSGTL P+D + L ++ F ++++N HVI +
Sbjct: 535 WFKCLQPVPTFVRLKNAGARSIILTSGTLGPLDVLERHLGGGQVKFDIKLQNEHVIDPSR 594
Query: 474 IWAG-IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
+W G I +L+S++ R+ + Y ELGN +V+ + VP G+L+FF SY +M+
Sbjct: 595 VWVGSISGNAEDPNMLSSTFNTRNKMNYITELGNAVVSFVKNVPAGVLVFFCSYNVMNYT 654
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVFFA 590
+ WK + +++++ +PV P S + P+ D + K+ +G+VFFA
Sbjct: 655 TSVWKKIGIYSKIEMYKKVYLEARPVENPEDSDVVPVTTMDIFNRYKENIDKGNGSVFFA 714
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
+CRG+++EG+DF+D R + + G+P+ + D LK +YLD Y++ L+
Sbjct: 715 ICRGRLAEGIDFSDDYCRGIFVCGIPYPSRFDDNTALKMDYLDKLGHKT---YEKGNLA- 770
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS 710
DWY QA RA+NQAVGR IRH DYGAI+ D RF + K +S W+ ++ Y+
Sbjct: 771 ---NDWYTSQAIRAINQAVGRSIRHNRDYGAILLADYRFKYVPVKPNLSKWVLNRLKLYN 827
Query: 711 KFGDVVYTLTRFFRE 725
K D +L+ FF++
Sbjct: 828 KMDDCTESLSSFFKQ 842
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP-------KMVILGSREQLCIHREVSLLRGSAQNNA 149
I+Y SRTHSQL+QV+ E++ + Y K V+L SR+QLCI+ + G N
Sbjct: 138 IMYASRTHSQLKQVVGEVEKTEYSRQFNLRGLKGVLLASRDQLCINPLRGKMTGEVLANF 197
Query: 150 CRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKT 209
C+ L ++ R+C + + + + + +DIED+V G+ CPYF +E Q+
Sbjct: 198 CKALVQE---RKCEYFNTMRGDKNSKQFQFERLMDIEDMVETGKNKHFCPYFSVKEGQEH 254
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
D++ PYNYL+ P R + ++ ++SIL+ DEAHN E + + ASF++
Sbjct: 255 ADLILLPYNYLLSPDIRDAVDIDIRDSILVIDEAHNAEQVAEEGASFEI 303
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLA 58
I GIDV+FPF Y CQ YME VI++++ NALLESPTGTGKTL L+C+TLA
Sbjct: 11 IDGIDVKFPFYPYRCQRSYMEHVIKTIKESKNALLESPTGTGKTLSLICSTLA 63
>gi|393236508|gb|EJD44056.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 810
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 190/762 (24%), Positives = 346/762 (45%), Gaps = 116/762 (15%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FFIDNLPIIFPYDRIYPEQYSYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
+ L +Y SRT ++ + + ELK YR
Sbjct: 63 FPTKRKL----------------------------IYCSRTVPEIEKALAELKRLMAYRI 94
Query: 122 KMVI---------------LGSREQLCIHREVSL-LRGSAQNNACRFL-----CKK---- 156
+ L SR+ LC+H EV+ +G + CR L C+K
Sbjct: 95 ECAETEEERERERAFTGLGLTSRKNLCLHPEVAKEKKGWVVDARCRDLTCTANCEKARAN 154
Query: 157 -GTNRRCNHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTRELQKTVDIVF 214
G+ C H ++ + N L + I + D+ G+ G CPYF R + VD++
Sbjct: 155 PGSVPVCTWHDKLGEMEPGN--LIPQGIWTLADVQAYGQEKGVCPYFTIRRMMPFVDVII 212
Query: 215 APYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNC 273
++YL+DP + + E K++I++FDEAHN++ +C ++ S DL+ +L +
Sbjct: 213 YSFHYLLDPKVAEQVSKELSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDSAARSVTRL 272
Query: 274 ID----ISSTRRGQSSDETLN-----------PDNFAILRALLLKLEKRIAEVPINSKE- 317
D I T + DE D A + +L + VP N ++
Sbjct: 273 GDQIEEIKKTDASKLQDEYAKLVEGLQEAADARDEDAFIANPILPDDLLTEAVPGNIRKA 332
Query: 318 ---LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEVAAELLQ--EDKLQN-KKST 366
+ F K Y+ + L++ ET + DI + L+ ++LQ+ ++
Sbjct: 333 EHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITFIERRPLRFCAERLQSLVRTL 392
Query: 367 TACRIESISNILKII-FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
R++ + ++ K+ F + + + + + + A V + + C +P +
Sbjct: 393 ELTRLDEMRSLQKVASFATLVATYEKGFLLILEPFETDNATV----PNPVFHFTCLDPSL 448
Query: 426 AMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
A++ F R S+++TSGT+SP+D + + L+ ++ P +T ++ G
Sbjct: 449 AIKPIFERF--SSVVITSGTISPLDMYPKMLQFTPVVQETYPMTLTRDAFLPLVITRGSD 506
Query: 485 GYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
++S + R+ + G+ ++ ++IVPDG++ FFPSY M+ +A W + G L
Sbjct: 507 QVAVSSRFEVRNDPAVVRNFGSILIEYSKIVPDGIVAFFPSYLYMESIVAAWNDM--GIL 564
Query: 545 TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+W K+K VE ++ +A+E+Y + + GAV +V RGKVSEG+DF
Sbjct: 565 NEVW----KNKLIFVETPDANETSIALENY--RRACNNGRGAVLLSVARGKVSEGIDFDH 618
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
H GRAV++ G+P+ ++ + EYL + + E+ L F A R
Sbjct: 619 HYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LGF---------DAMRN 665
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
Q VGRV+R + D+G ++F D+RFA +++++ WI +I
Sbjct: 666 AAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYI 707
>gi|195382171|ref|XP_002049804.1| GJ20544 [Drosophila virilis]
gi|194144601|gb|EDW60997.1| GJ20544 [Drosophila virilis]
Length = 769
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 202/756 (26%), Positives = 345/756 (45%), Gaps = 114/756 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR---- 120
I ++ + ++Y SRT ++ +VI EL+
Sbjct: 60 -----------MIEHPET-----------VRKLIYCSRTVPEIEKVIAELQNLMVYYDRH 97
Query: 121 ----PKM--VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
P + ++L SR+ +CIH EVS R G A + C L HH A+
Sbjct: 98 CPVPPGLTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIR---EHHELDAEVPI 154
Query: 171 --YMKNNPHLGDE---PIDI---EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
Y + G E P+ I +DL GR+ CPYF+ R IV Y+YL+D
Sbjct: 155 CQYFEGFTLEGKESTLPVGIYSLDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLD 214
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGL----------LTACISEAK 271
P + + E + + ++FDEAHN++ +C D+ S ++ + LT + + +
Sbjct: 215 PKIAQVVSKEMTREACVVFDEAHNIDNVCIDSMSVKINRRIVERSTNALNQLTKLVQDMR 274
Query: 272 ----NCIDISSTRRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTK 322
N ++ R Q D ++ D IL +L + VP N + L F +
Sbjct: 275 EEDTNRLNEEYQRMVQGLKDASVQRDTDMILANPVLPSDVLKEVVPGNIRNADHFLSFLR 334
Query: 323 PG-PYIYELLADLNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI- 377
YI L ++ QE+ + +V++++ E K ++ ++ R IS++
Sbjct: 335 RFVEYIKTRLRVHHVVQESPAGFLK--DVSSKICIERKPLRFCAERLSSLLRTLEISDLT 392
Query: 378 ----LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-F 430
L +I F + ++ + + + D V ++ + + C + IAM F
Sbjct: 393 EYGALTLITHFATLVSTYTKGFTIIIEPFDDKTPTV----SNPIMHFSCLDSSIAMAPVF 448
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNS 490
SR + ++++TSGTLSPMD + + L + + + + IV G ++S
Sbjct: 449 SRFQ--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVAISS 506
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
+ R+ + G +V +A+ VPDG++ FF SY ++ +A W + I +
Sbjct: 507 KFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDT 560
Query: 551 ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV 610
+ ++K +E + ++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV
Sbjct: 561 LLRYKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAV 618
Query: 611 VITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
++ G+P+ ++ + +YL Q Q + ++ L+F A R Q VG
Sbjct: 619 LMFGIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVG 665
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R +R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 666 RALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHL 701
>gi|260946235|ref|XP_002617415.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC 42720]
gi|238849269|gb|EEQ38733.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC 42720]
Length = 825
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 179/669 (26%), Positives = 306/669 (45%), Gaps = 85/669 (12%)
Query: 96 TILYTSRTHSQLRQVIQELKTSNYRP---------KMVILGSREQLCIHREV-SLLRGSA 145
TIL++SRTHSQL Q +L+ ++ K V LGSR+QLCI+ +V SL ++
Sbjct: 200 TILFSSRTHSQLYQFAHQLQLPSFHSSLEEITEYTKFVALGSRKQLCINDKVRSLGNLNS 259
Query: 146 QNNACRFLCKKGTNRRCNHHSRVAD--------------YMKNNPHLGDEPIDIEDLVNI 191
N+AC L KK ++ C+ ++ ++K N DIED+ ++
Sbjct: 260 INDACVDLQKK--DQPCDFFPKITKSGVSEKTKSFIDNCFVKVN--------DIEDVASL 309
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G+ CPY+ R +I+ PY L+ R+ L ++ +NSI++ DEAHNL +
Sbjct: 310 GKKLEICPYYTVRNATDYAEIIALPYQLLLSKSARESLDLKIENSIVVIDEAHNLIDTIS 369
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
S LS LT CI+ K + + R LN N R L+KL K V
Sbjct: 370 SMNSVRLSLSELTMCINGLKLYLSKFARR--------LNSGN----RIYLVKLIKLCQVV 417
Query: 312 -PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR 370
+K L + K G + + L I Q LI++ ++ L KS A +
Sbjct: 418 QKFMTKTLSY-KSG----DKVDPLEIFQGNTGDLINVNKLNKYL--------SKSKIAYK 464
Query: 371 IESISNILKIIFRDKGTAHSAYYRV----HVREADANAADVL--KGKASRTLSWWCFNPG 424
IES + + +++ ++V +N +++ + + TL + +P
Sbjct: 465 IESYLEHVDDQISKQSSSNPILFKVVQFLECLTNTSNEGEIIWDMQEENVTLQYILLDPS 524
Query: 425 IAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP----HVITSKQIWAGIVP 480
I ++ + ++L GT+ PMD F L N P + H+I + + +
Sbjct: 525 IIFEDVLS-QAKCVLLCGGTMEPMDDFKSYLFPNIPSNLVKTFTCDHLIPKENL--KVFA 581
Query: 481 VGPSGYL-LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNT 539
V + L S++ R +ELG I + + +P G++IFFPSY + + W ++
Sbjct: 582 VKATNNLDFEFSFQKRSQPSMMRELGLLIARLCQSIPSGVVIFFPSYKYLSHVFSLWSSS 641
Query: 540 SHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEG 599
I ERI K EP+ S +++Y +K +S GA FAV GK++EG
Sbjct: 642 G------ILERISSSKTVFQEPKDSQEVESTLQEYSNAVK-SSFKGAALFAVVGGKMAEG 694
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQ 659
++FAD R V++ G+P+ + K+ ++ ++G E + D+Y
Sbjct: 695 INFADDLARGVIVVGLPYPNAAATDLVAKQNHIVRTLIAKGKSRSEAANA---SRDFYEN 751
Query: 660 QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFGDVVYT 718
RAVNQ++GR IRH +DY I D+R++ + + ++S W++ + +++++
Sbjct: 752 ICMRAVNQSIGRSIRHANDYSTIFLIDQRYSRKNIRQKLSKWVRNQLSDSDQNIDEIIHS 811
Query: 719 LTRFFREER 727
+FF R
Sbjct: 812 TEKFFEYHR 820
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAWRKSL 63
D P+E Y Q M+ + +++ N L ESPTGTGKTL ++C+T+ W +
Sbjct: 15 DYSHPYEPYKIQNELMDAIYETVNNGFKVGLFESPTGTGKTLSIICSTMTWLRDF 69
>gi|389744669|gb|EIM85851.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 875
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 193/701 (27%), Positives = 303/701 (43%), Gaps = 110/701 (15%)
Query: 97 ILYTSRTHSQLRQVIQELK----------------------------------------- 115
I Y+SRTHSQL Q+I EL+
Sbjct: 210 IYYSSRTHSQLSQIIPELRRLKRNRQNPPATGHMSAASHTTSLPQPSSLKRGYQALASDN 269
Query: 116 ------TSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVA 169
S + + V LGSR+QLCI+ ++ +G + CR L C + R
Sbjct: 270 DDDDVFVSQQQTRAVSLGSRKQLCINEDLRA-KGGDLDERCRDLMNSKKGHGCPYLPRDE 328
Query: 170 DYMKNNPHLGDE----PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
D M+ + L D+ P DIE+LV++ + CPYF +RE ++V PYN L+ P
Sbjct: 329 DDMRLH-DLRDQILAAPKDIEELVSVAKESRTCPYFASREAVSQAELVTMPYNLLLQPSA 387
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST-----R 280
R LG+ ++ +++ DEAHNL S LS ++ K+ +D ST R
Sbjct: 388 RDALGINLQDQVIVIDEAHNL-------ISTILSLSTVSMTYQNLKDSMDQISTYLSKFR 440
Query: 281 RGQSSDETLNPDNF-AILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQE 339
SS L+ L+A + + K ++ + +++ + L NI
Sbjct: 441 LRLSSRHMLHLTRLHTFLKAFMAFIIKWRSQQKLGNEQHAVVMTVGEVMRALGQ-NID-- 497
Query: 340 TAYKLIDIVEVAAELLQEDKLQNKKSTTAC------RIESISNILKIIFRDKGTAHSAYY 393
A L++I E L+ K+ K S + R +S S+ LK ++
Sbjct: 498 -AVNLLEIYEY----LRSSKIARKVSAYSTQFQPSQRKDSESDFLKPSLH----VIESFI 548
Query: 394 RVHVREAD------ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSP 447
+ AD ++ ADV S ++++ C NP Q SIIL GTLSP
Sbjct: 549 TSITQAADDGRLLLSSCADV----ESFSITYQCLNPSPQFQALVD-SAQSIILAGGTLSP 603
Query: 448 MDSFAQELKLNFPL-RVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQE 503
+ +L P R+ H+I + A IV GP L ++ N + E
Sbjct: 604 TEDIITQLFYYLPSSRISQFSCLHIIPKSNLQALIVGYGPRNSDLKFTHSNLSTKGLIDE 663
Query: 504 LGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQ 563
LG I+N+ R VP G++IFF SY ++ ++ WK G+L + E ++ VEP
Sbjct: 664 LGQAILNLIRSVPGGVVIFFSSYKVLHMALSTWKK---GHLFSALE---SKRELFVEPSD 717
Query: 564 SSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDP 623
S ++ Y L GA+ FAV K+SEGL+F+D+ R VVI G+PFA +
Sbjct: 718 GSEVESVLDAY--SLATQKPRGALLFAVIGAKLSEGLNFSDNLARMVVIVGLPFANLNSL 775
Query: 624 KVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAII 683
+++ + Y D QG L+G Y AVNQ++GR IRH+ D+ ++I
Sbjct: 776 ELKERLRYAD---HIQGTLPSSNSPFGLAGTYLYENLCMNAVNQSIGRAIRHKDDWASLI 832
Query: 684 FCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
D R+ + +++ WI+ + + FG V + +F R
Sbjct: 833 LLDSRYQNSRIYNKLPTWIKDVVISSTSFGQSVQLINQFMR 873
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 13 FPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ E Y+ QL M + +++ + A++ESPTGTGKTL LL AT W
Sbjct: 25 FPYPEPYNIQLDLMRHLYAAIEGRKVAIVESPTGTGKTLSLLSATFTW 72
>gi|268570308|ref|XP_002648469.1| Hypothetical protein CBG24757 [Caenorhabditis briggsae]
Length = 558
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 174/324 (53%), Gaps = 17/324 (5%)
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
+ K + ++CF I+M+ V +++L SGTLSP+ +F + LNF +EN
Sbjct: 18 IRKDSGKLVIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGAILENE 77
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
H + + IV G G L+ S++NR +IEY ++G +++ + P G+L+FF SY
Sbjct: 78 HALKQVPVLTSIVTRGKHGGLV-GSFQNRKNIEYVSDVGESLIRVMETTPQGVLVFFSSY 136
Query: 527 YLMDQCIACWKNTSHG---NLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST 583
MD+ + WK T G + T WE++ K KK VEPR Y + +
Sbjct: 137 SQMDELVEVWKKTKRGASDSPETFWEKMEKTKKIAVEPRAKEQLAAVRLRYTQGV--SEP 194
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYL-DLQAQSQGGE 642
GA AVCRGKVSEG+DF D RAV+I G+P+ + D +V LK+ YL DL +
Sbjct: 195 HGAALLAVCRGKVSEGIDFCDAESRAVIIVGIPYPPIHDERVVLKKMYLDDLMGR----- 249
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
K+ S DWY +A RAVNQA+GRV+RH++D+G ++ D R+A ++ W+
Sbjct: 250 -KDLTNEPQSSRDWYQMEAFRAVNQAIGRVLRHKNDFGTVVLIDTRYAS-AKPEMFPKWL 307
Query: 703 QPHI-QCYSKFGDVVYTLTRFFRE 725
+ I +C S + RFF+E
Sbjct: 308 RNTISRCDS--NNCALKTARFFKE 329
>gi|413944885|gb|AFW77534.1| hypothetical protein ZEAMMB73_555309, partial [Zea mays]
Length = 590
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 166/590 (28%), Positives = 276/590 (46%), Gaps = 72/590 (12%)
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
+DIEDL IG+ G CPY+ +R++ ++ D+V PY L+ R+ LG+ KNS++I DE
Sbjct: 21 LDIEDLAQIGKKIGTCPYYGSRDMVRSADLVVLPYQSLLLKSARESLGLNLKNSVVIIDE 80
Query: 243 AHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLL 302
AHNL AD+ S +S + ++ + +C+D R L N ++ L +
Sbjct: 81 AHNL----ADSLSNMYNSKITSSQLKAVLSCLDEYLDRFYN----VLGAGNRRYIQTLTV 132
Query: 303 KLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN 362
L K V IN+++ T I + L L+I I+IV++ + ++E + +
Sbjct: 133 -LTKSFIRVLINNQDGASTMSSMTINQFLFSLDIDN------INIVKL-CQFVKESNIIH 184
Query: 363 KKSTTACRIESISNILKIIFRDKGTAHSA------YYRVHVREADANAADVLKGK--ASR 414
K A ++ SI N + D+G++ + + R + D V K K
Sbjct: 185 KVCGYANKLSSIQNQFDLQLHDEGSSIACFQALVDFLRSLLNSNDDGRIIVAKQKLGGQP 244
Query: 415 TLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLR----VENPHV 468
++ F A + FS + + ++IL GTL P++ L + P H+
Sbjct: 245 DEAYLKFVMLCAEKIFSEVTQDAYAVILAGGTLQPIEETRLRLCPSLPPTDIKFFTCNHI 304
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ + I V GPSG + SY +R S +ELG I NI +VP+G+++FF SY
Sbjct: 305 VPPESILPIAVTRGPSGKAFDFSYNSRSSPSMIEELGRFICNIITVVPEGVVMFFSSYDY 364
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL-------KDT 581
+ W T G ++ RI K K EPR S+ + Y + +DT
Sbjct: 365 ERRVYDAWMTT--GTIS----RISKKKHVFREPRNSADVEAVLNKYKEAIESCSNFSQDT 418
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKV---------------- 625
+GA+ AV GK+SEG++F++ GR V++ G+P+ + +D ++
Sbjct: 419 GVNGALLLAVVGGKISEGINFSNGMGRCVIMVGLPYPSPSDVELIETIKHIESISSSFSV 478
Query: 626 ----RLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
L R+Y D + + Q G Y + G ++Y +AVNQ++GR IRH +DY A
Sbjct: 479 GDDKALSRKY-DDECELQPG-YDILRKCTRGGREYYENLCMKAVNQSIGRAIRHINDYAA 536
Query: 682 IIFCDERFAHPSRKSQISL-------WIQPHIQCYSKFGDVVYTLTRFFR 724
++ D R+A S S WI+ + C +G+V +L +FF+
Sbjct: 537 MLLVDSRYAQTSSTKSFSCPADKLPQWIKARLSCAQNYGEVHRSLHQFFK 586
>gi|242774370|ref|XP_002478428.1| TFIIH complex helicase Rad3, putative [Talaromyces stipitatus ATCC
10500]
gi|218722047|gb|EED21465.1| TFIIH complex helicase Rad3, putative [Talaromyces stipitatus ATCC
10500]
Length = 795
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 197/756 (26%), Positives = 335/756 (44%), Gaps = 113/756 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+KI I+V FP+ + Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FKIDEIEVLFPYPKIYPEQWQYMCDLKKALDAGGHCVLEMPSGTGKTVTLLSLIVAYQQ- 61
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
GDS+ ++Y SRT S++ + + ELK YR
Sbjct: 62 -------------------------HHGDSR--KLIYCSRTMSEIDKALHELKALMKYRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + G+ + CR L ++ C
Sbjct: 95 LELGHTEDFRGLGLSSRKNLCLHPSVKREKSGTVVDARCRSLTASFVAQKKERGEDVETC 154
Query: 163 NHHSRVADYMKNNPHLGDEP--IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
+H + D ++ PH EP DL+ + CPYF R + +++ Y+YL
Sbjct: 155 TYHDNL-DLLE--PHNLIEPGVFTFSDLLRYCQEKVTCPYFTVRRMLPYCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + + E K+ I++FDEAHN++ + ++ S DL+ L AKN ++
Sbjct: 212 LDPKIAERVSRELSKDCIVVFDEAHNIDNVAIESLSIDLTEDSLRKASRGAKN-LERKIE 270
Query: 280 RRGQSSDETLNPDNFAILRALLLKLEKR----IAEVPINSKEL-GFTKPGP--------- 325
S E L + ++ L E R I P+ ++L PG
Sbjct: 271 EMKTSDAEKLQSEYTKLVEGLKATEEARDEDLIMSNPVLPQDLLSEAVPGNIRRAEHFIA 330
Query: 326 ----YIYELLADLNITQETAYKLIDIVEVAAELL----QEDKLQNKKSTTACRIESISNI 377
+I L+ + +T + ++ EL+ + K +++ T+ R + NI
Sbjct: 331 FLQRFIQYLMTRMKVTHTISETTPSFLQHLRELVFIEAKPLKFCSERLTSLVRTLELMNI 390
Query: 378 LKI-------IFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEF 430
+F + + + + + ++ AA V + L C + IA +
Sbjct: 391 EDYQPLQEVAMFATLVSTYDRGFLLILEPFESEAATV----PNPVLHLACLDAAIAFRPV 446
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNS 490
SI++TSGTL+P+D F + L L+ + + IV G ++S
Sbjct: 447 CE-RFSSIVVTSGTLTPLDMFPKMLNFTPVLQESYTMTLARRSFLPMIVTRGSDQSQISS 505
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
S++ R+ + G +++ A+IVPDG+++FFPSY M+ + W + G L IW
Sbjct: 506 SFQTRNDPSNLRNYGTLLLDFAKIVPDGIVVFFPSYLYMESTLHVW--SGMGILDMIW-- 561
Query: 551 ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV 610
+K +VE + LA+E Y + + GA+ +V RGKV+EG+DF GRAV
Sbjct: 562 --NYKLILVETPDAQESSLALETY--RTACCNGRGAILMSVARGKVAEGVDFDHQYGRAV 617
Query: 611 VITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
+ G+PF +R + E+L + G + LSF A R +Q +G
Sbjct: 618 ICIGVPFQYTESRILRARLEFL----RENYGIRENDFLSF---------DAMRHASQCLG 664
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
RVIR + DYG ++ D+RFA +++Q+ WI I
Sbjct: 665 RVIRGKDDYGIMVLADKRFAR--KRNQLPKWINQTI 698
>gi|393904465|gb|EFO18242.2| hypothetical protein LOAG_10252 [Loa loa]
Length = 533
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 171/304 (56%), Gaps = 11/304 (3%)
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V S+I+TSGTLSP+DSF L ++FP+ +EN H QI + G L ++
Sbjct: 10 VRSVIVTSGTLSPLDSFVNSLGISFPITLENEHAANLDQILGARIRFSQGGIDLCGTFHK 69
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R + + E+ I+ +I+P G+L+FF SY +M+ C+ WK G T +WE I H
Sbjct: 70 RIYL-WSWEV---IIRACQIIPGGILVFFSSYVVMNSCLKFWKTAKFG-ATFMWEAITTH 124
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K+ +EP+ + + K+++ +GA+ FAVCR KVSEG+DF D R V++ G
Sbjct: 125 KEAFIEPKSKLELKAVLLQFRQKVREGGGNGAILFAVCRAKVSEGIDFLDSESRGVIVIG 184
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+A T+P++ LK+++ L + G KE K + +S ++WY A R VNQA+GRV+R
Sbjct: 185 IPYAPTTNPRIELKKQF--LTKERNGVAKKELKKN-ISADEWYQVDAIRGVNQAIGRVLR 241
Query: 675 HRHDYGAIIFCDERF-AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTN 733
H+ D+G +I D RF + PS++ W++ ++ Y G +FF++ I N
Sbjct: 242 HKDDFGVVILVDSRFCSMPSKR--FPSWMRESLKNYQNIGHFENDCKQFFKKRNIEVCVN 299
Query: 734 LKLI 737
+ I
Sbjct: 300 QRTI 303
>gi|350584454|ref|XP_003126634.3| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Sus scrofa]
Length = 693
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 172/704 (24%), Positives = 312/704 (44%), Gaps = 93/704 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC-- 150
I Y SRTHSQL Q + E++ S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 15 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCVNDDVRKL-GSVQLINDRCVD 73
Query: 151 --------RFLCKKGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + ++ RR R A ++ L DE + DIE LV +G+
Sbjct: 74 MQRSRRGKKSIAEEAKPRRRKQEQRTACPFYSHERLQLLRDEVLVGAKDIEQLVALGKEA 133
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY ++ R+ G+ + +++ DEAHNL S
Sbjct: 134 RACPYYGSRFAIPAAQLVVLPYQMVLHAATRQAAGIRLQGQVVLVDEAHNLMDTITGIHS 193
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N ++ +L LEK +A + N
Sbjct: 194 VEVSGSQLCQAHSQLLQYMERYGKR--------LKAKNLMYIKQILYLLEKFVAVLGGNV 245
Query: 316 KE----LGFTKPGPYIYEL--------LADLNITQETAY--------KLIDIVEVAAELL 355
K+ ++ G + + + ++N+ + Y KL+ E +L
Sbjct: 246 KQNPNTQSLSQAGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLLGFTERYGAVL 305
Query: 356 QEDKLQNKKSTTACRIESI------SNILKIIFRDKGTAHSAYYRVHVR-------EADA 402
+ Q + + ++S+ + + + G A +H+ A+
Sbjct: 306 ASPREQPRLAGFQHFLQSLQPGVTEAPAAPVEEEEAGAPRPASPLMHIEGFLAALTTANQ 365
Query: 403 NAADVLKGKAS---RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
+ +L + S +L + NP + + + E ++++ GT+ P+ F ++L
Sbjct: 366 DGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFREQLLACA 424
Query: 460 PLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
+ E HVI I ++ GP+ L +Y+ R+ + E G + N+
Sbjct: 425 GVEAERVVEFSCGHVIPPDNILPLVICSGPANQQLEFTYQKRELPQMMDETGRILCNLCN 484
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
+VP G++ FFPSY Q A W + + R+ KK EP++++ +++
Sbjct: 485 VVPGGVVCFFPSYEYQRQVHAHWDRSG------LLARLAVRKKIFQEPKRANQVEQVLKE 538
Query: 574 YMAKLK-----DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
Y +K + +GA+ +V GK+SEG++F+D GR VV+ GMP+ + +++ K
Sbjct: 539 YSRCIKHCGQAEGMVTGALLLSVVGGKMSEGINFSDSLGRCVVMVGMPYPNIRSAELQEK 598
Query: 629 REYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
YLD G+ G+ +AVNQ++GR IRH+ D+ +I+ D+R
Sbjct: 599 MAYLDQTLPRAPGQAA-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQR 651
Query: 689 FAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGST 732
+A P +++ WI+ ++ + FG L +F RE+ CGS+
Sbjct: 652 YARPPILAKLPAWIRDRVEVKATFGPAFAALRKFHREK--CGSS 693
>gi|388855689|emb|CCF50677.1| probable RAD3-DNA helicase/ATPase [Ustilago hordei]
Length = 847
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 198/770 (25%), Positives = 348/770 (45%), Gaps = 102/770 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR-- 60
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL ++++
Sbjct: 3 FYIDELPVLFPYPRIYPEQYAYMADLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 61 ------------------KSLGSFSTLGS--QVNNQISGSQSSVNSSQSGDSKLPTILYT 100
K+L L N G QS V +Q+ P
Sbjct: 63 HPAKRKLIYCSRTVPEIEKALAELKRLMEYRARYNLKQGQQSQVLRNQAEQGNAP----- 117
Query: 101 SRTHSQLRQVIQELKTSNYRPKMVILG--SREQLCIHREVSLLR-GSAQNNACR-----F 152
S H Q+ K ++ LG SR+ LCIH +VS R G + CR +
Sbjct: 118 SEHHIQMEG---RGKAGAQMQDILALGLSSRKNLCIHPDVSRERKGKVVDARCRDMTSSW 174
Query: 153 LCKKGTN-----RRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQ 207
C+KG C+ H + + M+ + +E++ R CPYF R +
Sbjct: 175 ACEKGRQDPGSVELCDFHEELGN-MEPGQLIPPGVWTLEEVKEYARDKRICPYFAVRRMI 233
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
VDI+ ++YL+DP + + E K++I+IFDEAHN++ +C ++ S DL+ +L +
Sbjct: 234 PFVDIIIYSFHYLLDPKVAEQVSKEMSKDAIVIFDEAHNIDNVCIESLSIDLTRPMLDS- 292
Query: 267 ISEAKNCIDISSTRRGQ--SSDETLNPDNFA-ILRALLLKLEKRIAEV----PINSKEL- 318
A I+ S R Q +D + D +A +++ L + ++R AE P+ +L
Sbjct: 293 ---AYRSINQLSERVDQIKKTDASKLQDEYARLVQGLQEQGDQREAETFMANPVLPDDLL 349
Query: 319 -----GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC 369
G + + L +T +++ +V E A LQ K +K C
Sbjct: 350 SEAIPGNIRRAEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIERKPLRFC 409
Query: 370 --RIESISNILKIIFRDKGTA--HSAYYRVHVREADANAADVLKGKASRT-------LSW 418
R+ + L++ D+ +A A + V D +L+ + +
Sbjct: 410 AERLRMLVGTLELTRLDEYSALQKVAAFATLVATYDKGFLLILEPFETENATVPNPIFHF 469
Query: 419 WCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAG 477
C + +A+ F R S+I+TSGT+SP+D + + LK + ++ +T +
Sbjct: 470 TCLDASLAIAPVFERF--SSVIITSGTISPLDMYPKMLKFDAIIQESYAMTLTRQCFLPL 527
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
++ G ++S + R+ + G+ ++ A+ VPDG++ FFPSY M+ +A W
Sbjct: 528 VITRGSDQVAISSRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFPSYLYMESIVAAWH 587
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
+ G L +W K+K +E + +A+E+Y + + GA+ +V RGKVS
Sbjct: 588 DM--GILDQVW----KYKLIFIETPDAPETSIALENY--RRACDNGRGAILLSVARGKVS 639
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EG+DF + GRAV++ G+P+ ++ + E+L + + ++ L+F
Sbjct: 640 EGIDFDHNYGRAVIMFGVPYQYTESRILKARLEFLRDNFRIRENDF----LTF------- 688
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRV+R + DYG ++F D+RFA +++++ WI +I+
Sbjct: 689 --DAMRHAAQCVGRVLRGKTDYGLMVFADKRFARADKRNKLPKWIAQYIK 736
>gi|449018319|dbj|BAM81721.1| DNA excision repair protein ERCC2/XPD [Cyanidioschyzon merolae
strain 10D]
Length = 782
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 201/780 (25%), Positives = 330/780 (42%), Gaps = 141/780 (18%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ + + V FP++ Y Q YM ++ ++L + + +LE PTGTGKT+ LL
Sbjct: 3 FNVENVKVYFPYDYVYPEQYAYMRELKRALDSNGHCILEMPTGTGKTVTLL--------- 53
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS-NYRP 121
S + S Q ++ ++Y +RT +L +V+ EL+ YR
Sbjct: 54 -------------------SFITSYQLAHREVRKLIYCTRTVGELEKVLSELEVVIRYRD 94
Query: 122 KM---------------VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNR--RCNH 164
V L +R LC+ VS + ++ LC+ T R +H
Sbjct: 95 AQLEKAGKRDQAAAVLAVGLTTRRNLCLQSAVSKAESREEADS---LCRSLTASWVRESH 151
Query: 165 HSRVADYMKNNPHLGDEPIDI-----------------------EDLVNIGRTFGPCPYF 201
+ +A + KN P L D P + E ++ IGR G CPY+
Sbjct: 152 SAAIARFEKN-PDLEDLPTTLCQFYEGYRREGNDAILPSGIYTLEKVLQIGRERGWCPYY 210
Query: 202 MTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSS 260
R +++ Y YL+DP + E + I++FDEAHN++ +C DA S L
Sbjct: 211 TVRHTMNFANVIVYNYQYLLDPKIAGLISRELSRECIVVFDEAHNIDNVCIDALSVSLRL 270
Query: 261 GLL---TACISEAKNCIDISST-----------RRGQSSDETLNPDNFAILRALLLKLEK 306
L A + +N I T R Q + D F I + ++ +
Sbjct: 271 DDLRRAQANVVSLRNRIQEIRTHDERRLLEEYRRILQGIRRPADVDAFTIEASPVIPEDV 330
Query: 307 RIAEVPINSKE-----LGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQ 361
+P N + L + + + + +TQ+T + + + ++ L+
Sbjct: 331 LQETIPGNIRRGEHFLLFLLRLIDFFRQRMRSTQVTQDTPRNFLHALMPSVQIPDSKPLR 390
Query: 362 NKKSTTACRIES--ISNILKIIFRDK--------GTAHSAYYRVHVREADANAADVLKGK 411
A +++ ISN+ + K GT +S + V + D A +V
Sbjct: 391 FCSDRLASLLQTLEISNVRDFVSLQKLAHFATLLGT-YSQGFSVIMEPYDERAPNV---- 445
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
L C + I M+ F+R + S+ILTSGT+SP+D +A+ L R H +
Sbjct: 446 PDPVLQLSCLDASIGMRPIFTRFQ--SVILTSGTISPLDLYARILGF----RPAVAHSLN 499
Query: 471 SKQIWAGIVPV----GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
A I P+ G ++S Y +R + G +V +A +VPDG++ FF SY
Sbjct: 500 ISLHRASICPMVIARGSDQIAISSKYDSRRDPSVIRNYGALLVELASVVPDGVVGFFTSY 559
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGA 586
++ + W I +++ +HK +E +A+E+Y + S GA
Sbjct: 560 IYLESVVQMWHQMG------IIQKLLEHKLVFIETPDIFESSVALENY--RRACDSGRGA 611
Query: 587 VFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET 646
+F V RGKV+EG+DF H GR VVI G+PF +R + E+L Q + G++
Sbjct: 612 IFLCVARGKVAEGIDFDRHYGRCVVIIGVPFQYTESRVLRARLEFLREHLQIREGDF--- 668
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
L+F A R Q +GRVIR + DYG +I D R+ +S++ LWIQ H+
Sbjct: 669 -LTF---------DAMRQAAQCMGRVIRSKVDYGLMILADRRYNRAQNRSKLPLWIQSHL 718
>gi|119195411|ref|XP_001248309.1| hypothetical protein CIMG_02080 [Coccidioides immitis RS]
gi|121932141|sp|Q1E5T3.1|CHL1_COCIM RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
Length = 861
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 199/727 (27%), Positives = 327/727 (44%), Gaps = 99/727 (13%)
Query: 67 STLGSQVNNQISGSQSSVNSSQSGDSKLPT---------ILYTSRTHSQLRQVIQELKTS 117
ST ++ N+ +S + ++ SG +++ I Y SRTHSQL Q +EL+
Sbjct: 158 STHDAKSNSDLSATTIALLEKLSGSAEIQDDFEEENAVKIFYCSRTHSQLAQFARELRRV 217
Query: 118 NYRP-----------------------------KMVILGSREQLCIHREVSLLRGSAQNN 148
+ P K V LGSR+ +CI+ +V L G+A
Sbjct: 218 VFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLGSRKTMCINPKVRRL-GNATAI 276
Query: 149 ACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD-------EPIDIEDLVNIGRTFGPCPYF 201
R L + +N H A +N + D E DIED+ IG+ G CPY+
Sbjct: 277 NERCLDLQSSNVLPGHKCPFAPSKENELAINDFRDHVLAEVHDIEDIGKIGQRTGICPYY 336
Query: 202 MTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSG 261
+R + +IV PY L+ R L + K+ ++I DEAHNL + A+ S ++S
Sbjct: 337 ASRSVIGHSEIVTLPYQLLLQKSARDALDISLKDHVIIIDEAHNLMDVIANIHSVNVSLT 396
Query: 262 LLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL--G 319
L + + R+ ++ + N A + LL + K + V + ++EL G
Sbjct: 397 QLRIGLEQL-----TIYARKYKARLKGKNRVYVAQVMRLLGSIAKYLESV-LAARELREG 450
Query: 320 FTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK-----KSTTACRIES- 373
P L++ I Q +KL + LQE KL K +S+T+ ++
Sbjct: 451 AVDPS----YLMSGKGIDQINLHKL-------SRYLQESKLARKVDGYIESSTSLEEKNP 499
Query: 374 -ISNILKIIFRDKG-----TAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAM 427
S + ++F+ + SA R+ + N DVL L + +P
Sbjct: 500 ETSTTVPVLFQVQSFLLSLMNPSAEGRLFF---EKNGNDVL-------LKYTLLDPTAHF 549
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP---LRV-ENPHVITSKQIWAGIVPVGP 483
+E E ++IL GT+SPM + L LR HVI + + A V G
Sbjct: 550 REAVE-EARAVILAGGTMSPMSDYRDHLFSYLAPGQLRTFSYGHVIPTSNLSARPVSRGI 608
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN--TSH 541
+ ++ R+S +LG TI I + PDG++ FFPSY ++Q + WK ++
Sbjct: 609 LDTEFDFTFEKRNSRAMIIDLGKTISEICKATPDGVVAFFPSYDFLNQVVEIWKQPCSNS 668
Query: 542 GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLD 601
GN +I + + K + E ++ ++ A+ A D GA+ +V GK+SEG++
Sbjct: 669 GN-PSILDSLGLVKPLLYESKEKAMNTEALLQKYANFIDEG-KGALLLSVMGGKLSEGIN 726
Query: 602 FADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QSQGGEYKETKLSFLSGEDWYNQ 659
F+D GR V++ G+PFA + + + K +Y++ + +S GGE + L+G D+Y
Sbjct: 727 FSDRLGRGVIVIGLPFANIRSAEWQAKIQYVERKTYERSSGGEETRRSKAKLAGRDFYEN 786
Query: 660 QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTL 719
R VNQ +GR IRH+HDY AI+ D R+ +S++ WI+ + + G + L
Sbjct: 787 ACMRVVNQCIGRAIRHQHDYAAILMFDRRYGTARIQSKLPEWIRRSL-ISAPIGATISNL 845
Query: 720 TRFFREE 726
FF E+
Sbjct: 846 YTFFEEK 852
Score = 47.8 bits (112), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
P+ YD Q+ +M + ++ + ESPTGTGK+L L+C +L W
Sbjct: 11 PYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTGKSLSLICGSLTW 56
>gi|392862459|gb|EAS36901.2| ATP-dependent RNA helicase CHL1 [Coccidioides immitis RS]
Length = 908
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 199/727 (27%), Positives = 327/727 (44%), Gaps = 99/727 (13%)
Query: 67 STLGSQVNNQISGSQSSVNSSQSGDSKLP---------TILYTSRTHSQLRQVIQELKTS 117
ST ++ N+ +S + ++ SG +++ I Y SRTHSQL Q +EL+
Sbjct: 205 STHDAKSNSDLSATTIALLEKLSGSAEIQDDFEEENAVKIFYCSRTHSQLAQFARELRRV 264
Query: 118 NYRP-----------------------------KMVILGSREQLCIHREVSLLRGSAQNN 148
+ P K V LGSR+ +CI+ +V L G+A
Sbjct: 265 VFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLGSRKTMCINPKVRRL-GNATAI 323
Query: 149 ACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD-------EPIDIEDLVNIGRTFGPCPYF 201
R L + +N H A +N + D E DIED+ IG+ G CPY+
Sbjct: 324 NERCLDLQSSNVLPGHKCPFAPSKENELAINDFRDHVLAEVHDIEDIGKIGQRTGICPYY 383
Query: 202 MTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSG 261
+R + +IV PY L+ R L + K+ ++I DEAHNL + A+ S ++S
Sbjct: 384 ASRSVIGHSEIVTLPYQLLLQKSARDALDISLKDHVIIIDEAHNLMDVIANIHSVNVSLT 443
Query: 262 LLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL--G 319
L + + R+ ++ + N A + LL + K + V + ++EL G
Sbjct: 444 QLRIGLEQL-----TIYARKYKARLKGKNRVYVAQVMRLLGSIAKYLESV-LAARELREG 497
Query: 320 FTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNK-----KSTTACRIES- 373
P L++ I Q +KL + LQE KL K +S+T+ ++
Sbjct: 498 AVDPS----YLMSGKGIDQINLHKL-------SRYLQESKLARKVDGYIESSTSLEEKNP 546
Query: 374 -ISNILKIIFRDKG-----TAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAM 427
S + ++F+ + SA R+ + N DVL L + +P
Sbjct: 547 ETSTTVPVLFQVQSFLLSLMNPSAEGRLFF---EKNGNDVL-------LKYTLLDPTAHF 596
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP---LRV-ENPHVITSKQIWAGIVPVGP 483
+E E ++IL GT+SPM + L LR HVI + + A V G
Sbjct: 597 REAVE-EARAVILAGGTMSPMSDYRDHLFSYLAPGQLRTFSYGHVIPTSNLSARPVSRGI 655
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN--TSH 541
+ ++ R+S +LG TI I + PDG++ FFPSY ++Q + WK ++
Sbjct: 656 LDTEFDFTFEKRNSRAMIIDLGKTISEICKATPDGVVAFFPSYDFLNQVVEIWKQPCSNS 715
Query: 542 GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLD 601
GN +I + + K + E ++ ++ A+ A D GA+ +V GK+SEG++
Sbjct: 716 GN-PSILDSLGLVKPLLYESKEKAMNTEALLQKYANFIDEG-KGALLLSVMGGKLSEGIN 773
Query: 602 FADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QSQGGEYKETKLSFLSGEDWYNQ 659
F+D GR V++ G+PFA + + + K +Y++ + +S GGE + L+G D+Y
Sbjct: 774 FSDRLGRGVIVIGLPFANIRSAEWQAKIQYVERKTYERSSGGEETRRSKAKLAGRDFYEN 833
Query: 660 QASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTL 719
R VNQ +GR IRH+HDY AI+ D R+ +S++ WI+ + + G + L
Sbjct: 834 ACMRVVNQCIGRAIRHQHDYAAILMFDRRYGTARIQSKLPEWIRRSL-ISAPIGATISNL 892
Query: 720 TRFFREE 726
FF E+
Sbjct: 893 YTFFEEK 899
>gi|119493390|ref|XP_001263885.1| DEAD_2 domain protein [Neosartorya fischeri NRRL 181]
gi|206558089|sp|A1D8E4.1|CHL1_NEOFI RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|119412045|gb|EAW21988.1| DEAD_2 domain protein [Neosartorya fischeri NRRL 181]
Length = 861
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 190/710 (26%), Positives = 304/710 (42%), Gaps = 105/710 (14%)
Query: 57 LAWRKSLGSFSTLGS-------QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQ 109
+ + K LG S L + + Q S S + D K I Y SRTHSQL Q
Sbjct: 165 ITYSKKLGDISGLSTSTLELLERFKEQFSASAEDETGHEDDDVK---IFYCSRTHSQLSQ 221
Query: 110 VIQELK--------------------TSNYRPKMVILGSREQLCIHREV-SLLRGSAQNN 148
EL+ + R K + LGSR+ LCI+ +V SL +A N
Sbjct: 222 FSSELRRVKMPSSMPAELSTSDANTDDAEERVKHLTLGSRKNLCINPKVMSLGNATAINE 281
Query: 149 ACRFLCKKGT--NRRCNHHSRVAD---YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMT 203
C L + G +RC + D ++ H DIED+ +G+ G CPY+ +
Sbjct: 282 RCLELQQPGVAAEKRCPYLPSKEDEGQVLQFRDHTLATIKDIEDMGKLGKRMGICPYYAS 341
Query: 204 RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLL 263
R + K +IV PY L+ R L + KN ++I DEAHNL + S ++ L
Sbjct: 342 RSVLKHSEIVTLPYPLLLQRSARDALDLSIKNHVVIIDEAHNLMDAICNIHSVTITLSQL 401
Query: 264 TACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAE-----VPINSKEL 318
+S+ T + L N + + A +++L IA+ + N
Sbjct: 402 QTALSQL--------TTYARKHKARLKGKNRSYI-AQIIRLISSIADHLRSTIGENLPAE 452
Query: 319 GFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL----------------QN 362
G P +L+A + Q YKL + LQE KL Q+
Sbjct: 453 GAVDPS----DLMAGKGVDQINPYKL-------SRYLQESKLARKVDGYVEFSKDKNQQS 501
Query: 363 KKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFN 422
++ + + + L + Y + H D+ L + +
Sbjct: 502 DDKPSSPVLFLVQSFLLPLMNPSAEGRFFYLKFH--------DDI-------QLKYMLLD 546
Query: 423 PGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-KLNFPLRVEN---PHVITSKQIWAGI 478
P +E + ++IL GT+SPM + L P R++ HVI + + A
Sbjct: 547 PTNHFREIVE-DARAVILAGGTMSPMSDYRNHLFSYIAPSRLDTFSYGHVIPPENLIAHT 605
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
+ G G + +Y +RDS + +LG T+ + + +PDG++ FFPSY + + +A W+
Sbjct: 606 LVNGVLGSEFDFTYDSRDSEKMILDLGRTVAMLCQAIPDGVVAFFPSYDYLSRILAIWRK 665
Query: 539 TSHGNL-TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVFFAVCRGK 595
G TI I + K + E R ED + + T S GA+ +V GK
Sbjct: 666 PLVGEKGQTILSLIERKKSILYEGRD---MGAKTEDLLQEYTRTIDSGQGALLLSVVGGK 722
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QSQGGEYKETKLSFLSG 653
+SEG++F+D GR V+I G+PF + + K +Y++ + S G E ++ +G
Sbjct: 723 LSEGINFSDKLGRGVLIIGLPFPNIRSAVWQAKIQYVEQKTYNSSSGSEKDRLSIAKAAG 782
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+D+Y RAVNQ +GR IRHR+DY AI+ D R+ + + ++ WI+
Sbjct: 783 KDFYENACMRAVNQCIGRAIRHRNDYAAIVMIDRRYEKANIQGKLPAWIK 832
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
P+ YD QL +M + L+ A+ ESPTGTGK+L L+C ++ W
Sbjct: 11 PYSPYDIQLQFMRALYTCLEEGKVAVFESPTGTGKSLSLICGSMTW 56
>gi|452000477|gb|EMD92938.1| hypothetical protein COCHEDRAFT_1133207 [Cochliobolus
heterostrophus C5]
Length = 799
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 189/748 (25%), Positives = 327/748 (43%), Gaps = 103/748 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FYIDSLPVLFPYPRVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIIAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK YR
Sbjct: 63 YPEKRKL----------------------------IYCSRTMSEIEKALAELKALMKYRT 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + G+ + CR L + C
Sbjct: 95 TELGYEEEFRGLGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEKKERGEDVELC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + + ++ G CPYF R + +++ Y+YL+D
Sbjct: 155 VYHENL-DLLEPHNLIPPGVWTFDGILKYGEQQKQCPYFTARRMMPYCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + E K+ I++FDEAHN++ +C ++ S DL+ +L ++ N +D T
Sbjct: 214 PKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKA-TKGVNNLDRKITEM 272
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL----------GFTKPGPYIYELL 331
S E L + ++ L E R E + + L G + + L
Sbjct: 273 KSSDAEKLQNEYAKLVEGLRAADEARNEEAFMANPALPDDLLTEAVPGNIRRAEHFVAFL 332
Query: 332 ADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI--IFR 383
+T K++++V + E L+ K +K C R+ S+ L++ I
Sbjct: 333 KRFIEYLKTRMKVLNVVADTPPEFLKHLKDLTFIERKPLRFCAERLTSLVRTLELTNIED 392
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEV 435
+ A + V + +++ S T L C + IA++ F R
Sbjct: 393 YQPLQEVATFATLVATYETGFLLIIEPFESATATVPNPVLHLTCLDAAIAIKPVFERFY- 451
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+I+TSGT+SP+D + + L N ++ +T K IV G + S + +R
Sbjct: 452 -SVIVTSGTMSPLDMYPRMLNFNTVVQESFTMTLTRKSFLPMIVDRGNDQNQVTSQFEHR 510
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ ++ ++ GN ++ ++ PDG+++FFPSY M+ I+ W+ L T+W K+K
Sbjct: 511 NDLQVQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESIISAWQGME--ILDTVW----KYK 564
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+VE + LA+E + + GAV V RGKVSEG+DF H GR V+ G+
Sbjct: 565 LILVETPDAQETALALETFRTACNN--GRGAVLLCVARGKVSEGIDFDHHYGRTVLCMGV 622
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ ++ + E+L Y+ + FLS + A R Q +GRVIR
Sbjct: 623 PYQYTESRILKARLEFLR-------ETYRIKEADFLSFD------AMRHAAQCLGRVIRG 669
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+ DYG ++ D+RF +++Q+ WIQ
Sbjct: 670 KDDYGIMVLADKRFN--KKQTQLPKWIQ 695
>gi|451850440|gb|EMD63742.1| hypothetical protein COCSADRAFT_37505 [Cochliobolus sativus ND90Pr]
Length = 798
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 189/748 (25%), Positives = 327/748 (43%), Gaps = 103/748 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FYIDSLPVLFPYPRVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIIAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK YR
Sbjct: 63 YPEKRKL----------------------------IYCSRTMSEIEKALAELKALMKYRT 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + G+ + CR L + C
Sbjct: 95 TELGYEEEFRGLGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEKKERGEDVELC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + + ++ G CPYF R + +++ Y+YL+D
Sbjct: 155 VYHENL-DLLEPHNLIPPGVWTFDGILKYGEQQKQCPYFTARRMMPYCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + E K+ I++FDEAHN++ +C ++ S DL+ +L ++ N +D T
Sbjct: 214 PKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKA-TKGVNNLDRKITEM 272
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL----------GFTKPGPYIYELL 331
S E L + ++ L E R E + + L G + + L
Sbjct: 273 KSSDAEKLQNEYAKLVEGLRAADEARNEEAFMANPALPDDLLTEAVPGNIRRAEHFVAFL 332
Query: 332 ADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI--IFR 383
+T K++++V + E L+ K +K C R+ S+ L++ I
Sbjct: 333 KRFIEYLKTRMKVLNVVADTPPEFLKHLKDLTFIERKPLRFCAERLTSLVRTLELTNIED 392
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEV 435
+ A + V + +++ S T L C + IA++ F R
Sbjct: 393 YQPLQEVATFATLVATYETGFLLIIEPFESATATVPNPVLHLTCLDAAIAIKPVFERFY- 451
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+I+TSGT+SP+D + + L N ++ +T K IV G + S + +R
Sbjct: 452 -SVIVTSGTMSPLDMYPRMLNFNTVVQESFTMTLTRKSFLPMIVDRGNDQNQVTSQFEHR 510
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ ++ ++ GN ++ ++ PDG+++FFPSY M+ I+ W+ L T+W K+K
Sbjct: 511 NDLQVQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESIISAWQGME--ILDTVW----KYK 564
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+VE + LA+E + + GAV V RGKVSEG+DF H GR V+ G+
Sbjct: 565 LILVETPDAQETALALETFRTACNN--GRGAVLLCVARGKVSEGIDFDHHYGRTVLCMGV 622
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ ++ + E+L Y+ + FLS + A R Q +GRVIR
Sbjct: 623 PYQYTESRILKARLEFLR-------ETYRIKEADFLSFD------AMRHAAQCLGRVIRG 669
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+ DYG ++ D+RF +++Q+ WIQ
Sbjct: 670 KDDYGIMVLADKRFN--KKQTQLPKWIQ 695
>gi|213404244|ref|XP_002172894.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
gi|212000941|gb|EEB06601.1| fanconi anemia group J protein [Schizosaccharomyces japonicus
yFS275]
Length = 847
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 171/680 (25%), Positives = 301/680 (44%), Gaps = 97/680 (14%)
Query: 88 QSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSA 145
Q D LP + Q +++L + + + + L SR+ LCI+ V L +A
Sbjct: 223 QPSDGTLPQV------QKQFLDEVRKLDMTTFTTPVRAISLASRKNLCINENVKRLGSAA 276
Query: 146 QNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD-------EPIDIEDLVNIGRTFGPC 198
N +C +++ + D E +D+ED++ +G C
Sbjct: 277 L-----------INEKCIEIQGNCPFLQATTPIDDFRDAVLAEVMDMEDMITLGEQTQTC 325
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHN-LEGICADAASFD 257
PY+ RE IV PY L+ R LG+ ++++ I DEAHN ++ IC+
Sbjct: 326 PYYGIREAIAPAHIVAVPYAMLLQQSTRDSLGISLRDNVCILDEAHNVIDSICS------ 379
Query: 258 LSSGLLTACISEAKN--CIDISSTRRGQSSDETLNPDNFAILRAL-----LLKLEKRIAE 310
+L+A +S+ + C + + P+ I + L LL + +R+A
Sbjct: 380 ----ILSASVSQTEVLLCQKQLQCYLQRFAKRLSGPNRMHIQQLLRIVDELLHVFERLA- 434
Query: 311 VPINSKELGFTKPGP-YIYELLADLNITQETAY-------KLIDIVEVAAELLQEDKLQN 362
+E P +I +N+ + T Y + + V L ED +
Sbjct: 435 ----GQEACTIDPATLFIAHGTDQINLHRLTQYISASKIARKANTFHVKNTLEAEDADHS 490
Query: 363 KKS--TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASR-TLSWW 419
+ + T I ++ L I + +YR+ E + ++G S+ L +
Sbjct: 491 RHAVPTGTPVIMKLATFLTAI-ANPSPEGRLFYRMESVE------ETVQGHNSKAVLEYA 543
Query: 420 CFNPG---IAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN---PHVITSKQ 473
+P A+ E +R S+IL GT+SPMD AQ L +F RV+ H++
Sbjct: 544 LLDPSHEIAALAEQAR----SVILAGGTMSPMDEIAQLLFPSFLDRVKQFSCGHIVPESN 599
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
I ++ G G +Y+NR + Q+LG T++N+ ++PDG+++FF S+ + + I
Sbjct: 600 ICTVVLSKGTGGTPFRFTYKNRGDVNALQDLGRTMLNLTAVIPDGVVVFFCSFRHLSEAI 659
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFP------LAIEDYMAKLKDTSTSGAV 587
+CWK + +W R+CK K E ++ EDY A + T+ G +
Sbjct: 660 SCWKKSD------LWLRLCKRKPIFYEDKEREALAGDGSKKSVFEDYCASV--TAGKGGL 711
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
+V G++SEG++F+D GR V + GMPF D + + K ++ + S+ K
Sbjct: 712 LLSVINGRLSEGINFSDRLGRCVAVVGMPFPNAQDVRWQAKMSFVKEKMSSK--TEKGID 769
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
L + ++ RA NQ++GR IRH+ DY I+ DER+ PS ++++ W+ +I
Sbjct: 770 LDY----EFAENTCMRAANQSIGRAIRHKDDYACILLLDERYNKPSTQAKLPKWLANNIT 825
Query: 708 CYSKFGDVVYTLTRFFREER 727
FG + + +FFR ++
Sbjct: 826 HAQSFGVAMRQIAQFFRGKK 845
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQV 73
P+ Y QL +M+ + ++N + ESPTGTGK+L LLC L W GS L SQ
Sbjct: 41 PYIPYSIQLDFMKTLFDVIENGNIGIFESPTGTGKSLSLLCGALTWLDERGSMG-LCSQG 99
Query: 74 NNQISGSQSSVNSSQSGDS 92
++ ++V+ + GD+
Sbjct: 100 ETELQTGTTAVSDKKHGDT 118
>gi|350399366|ref|XP_003485501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Bombus
impatiens]
Length = 858
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 170/684 (24%), Positives = 306/684 (44%), Gaps = 87/684 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I + SRTHSQL Q I EL+ S Y + + L SR+ CI++ V L+ + N C L
Sbjct: 193 IFFCSRTHSQLSQFIGELRKSPYSKNVSVITLTSRQNYCINKNVKKLKHLNLINECCLQL 252
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHL-GDEPI----------DIEDLVNIGRTFGPCPYFM 202
+K T + + + P + G++ + DIE++V G C Y+
Sbjct: 253 QRKKTTAKDEKDLKRKKMTSSCPFVPGNQDLLIRESLMQIRDIEEIVQKGENLKTCAYYA 312
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
+R+ ++ PYN ++ R G+ K +ILI DEAHNL + S ++
Sbjct: 313 SRKAVSYGQLILVPYNTILHKNTRISSGINLKGNILIIDEAHNLLEAIENMHSVIITGRN 372
Query: 263 LTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK 322
L C S+ + T + +L +F LR L+ L A + N ++ +
Sbjct: 373 LLHCYSQLSQYQNRFQTLFSAKNILSLTQLSFC-LRKLITVLG---ATIKSNPDDVINIE 428
Query: 323 PGPYIY---ELLADLNITQETAYKLIDIVE-------VAAELLQED---KLQNKKSTTAC 369
P +Y E NI ++L+ ++ + + Q D K+ N + T C
Sbjct: 429 ASPKLYKIEEFAIMTNIDTVNMFELLKFIKNSRLNHKLQGFIEQYDTNLKIHNHNTKT-C 487
Query: 370 RIESISNILKIIFRDKGTAHSAYYRVHVREADANA--------ADVLKGKAS-------- 413
++ N +K K T + + E +N + L+ S
Sbjct: 488 GVKQFLNSIK----TKSTEFDTITDIQLDEDRSNNPMMTIISFLECLRSNCSDGRIFIIP 543
Query: 414 ------RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN-- 465
+ + NP + R + ++IL GT++PM+ F +L + E
Sbjct: 544 GPTVGQSIIKFLLLNPAAHFHDIIR-DARAVILAGGTMAPMNEFTDQLFIAAGASSERIV 602
Query: 466 ----PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
HVI + I I GP+G +++NR++ + ELG ++N+ I+P G+++
Sbjct: 603 TYSCDHVIPEENIVCSITTHGPTGIEFEFNFQNRENTKLLDELGRALLNLCNIIPAGIIV 662
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD- 580
F PSY + +N+ I +++ K + EP+ +S +++Y +K+
Sbjct: 663 FLPSYNFEELIYKHLENSG------IVKKLSLKKHILREPKSASQVHEILKEYSLHVKNP 716
Query: 581 -TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
S +G++ F+V GK+SEGL+F+D GR V++ GMP+ + +++ K +YL+ +S
Sbjct: 717 KNSQNGSLLFSVVGGKLSEGLNFSDDLGRCVIVVGMPYPNIQSLELQEKMKYLNENIKSD 776
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
+G+++Y +AVNQ +GR IRH +DY +I D+R+++ + +
Sbjct: 777 ------------AGQNFYENSCMKAVNQCIGRAIRHINDYSTVILLDKRYSYKIKA--LP 822
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFF 723
WIQ + + FG + +++FF
Sbjct: 823 QWIQRTLIIHKSFGSTIGAISKFF 846
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 18 YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
Y Q +M+++ + +N + ESPTGTGK++ ++C L W
Sbjct: 14 YPIQTQFMKELYKCFENSKLGIFESPTGTGKSMSIICGALKW 55
>gi|5022|emb|CAA43022.1| rad15 [Schizosaccharomyces pombe]
Length = 772
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 192/753 (25%), Positives = 328/753 (43%), Gaps = 105/753 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP+ Y Q YM + SL ALLE P+GTGKT+ LL +++++
Sbjct: 3 FYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------T 116
L +Y SRT S++ + + ELK T
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIDKALAELKRLMAYRT 94
Query: 117 SN--YRPKMVILG--SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
S Y + LG SR+ LC+H V + G+ + CR L + C
Sbjct: 95 SQLGYEEPFLGLGLTSRKNLCLHPSVRREKNGNVVDARCRSLTAGFVREQRLAGMDVPTC 154
Query: 163 NHHSRVADYMKNNPH--LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
H + D PH + + ++D+ G CPYF R + +++ Y+YL
Sbjct: 155 EFHDNLEDL---EPHSLISNGVWTLDDITEYGEKTTRCPYFTVRRMLPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + + E K+ I++FDEAHN++ +C ++ S DL+ L S++ ++
Sbjct: 212 LDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTESSLRKA-SKSILSLEQKVN 270
Query: 280 RRGQSSDETLNPDNFAILRAL----LLKLEKRIAEVPINSKEL------GFTKPGPYIYE 329
QS + L + ++R L E + P+ +++ G + +
Sbjct: 271 EVKQSDSKKLQDEYQKLVRGLQDANAANDEDQFMANPVLPEDVLKEAVPGNIRRAEHFIA 330
Query: 330 LLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKIIFR 383
L +T K++ ++ E LQ K +KK C R+ S+ L+I
Sbjct: 331 FLKRFVEYLKTRMKVLHVIAETPTSFLQHVKDITFIDKKPLRFCAERLTSLVRALQISLV 390
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT---------LSWWCFNPGIAMQE-FSRL 433
+ + A +L + T L + C + IA++ F R
Sbjct: 391 EDFHSLQQVVAFATLVATYERGFILILEPFETENATVPNPILRFSCLDASIAIKPVFERF 450
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
S+I+TSGTLSP+D + + L+ N ++ + +V G ++S +
Sbjct: 451 R--SVIITSGTLSPLDMYPKMLQFNTVMQESYGMSLARNCFLPMVVTRGSDQVAISSKFE 508
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + GN +V ++I PDGL+ FFPSY ++ ++ W+ S G L +W K
Sbjct: 509 ARNDPSVVRNYGNILVEFSKITPDGLVAFFPSYLYLESIVSSWQ--SMGILDEVW----K 562
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +VE LA+E Y A T+ GAV +V RGKVSEG+DF H GRAV++
Sbjct: 563 YKLILVETPDPHETTLALETYRAAC--TNGRGAVLLSVARGKVSEGVDFDHHYGRAVIMF 620
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + E+L Q + ++ L+F A R Q +GRV+
Sbjct: 621 GIPYQYTESRVLKARLEFLRDTYQIREADF----LTF---------DAMRHAAQCLGRVL 667
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + D+G ++ D+R+ +++++ WIQ +I
Sbjct: 668 RGKDDHGIMVLADKRYGRSDKRTKLPKWIQQYI 700
>gi|303310525|ref|XP_003065274.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240104936|gb|EER23129.1| DNA repair helicase family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 864
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 191/688 (27%), Positives = 311/688 (45%), Gaps = 90/688 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP-----------------------------KMVILG 127
I Y SRTHSQL Q +EL+ + P K V LG
Sbjct: 200 IFYCSRTHSQLAQFARELRRVAFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG 259
Query: 128 SREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD------- 180
SR+ +CI+ ++ L G+A R L + +N H A +N + D
Sbjct: 260 SRKTMCINPKIRRL-GNATAINERCLDLQSSNVLPEHKCPFAPSKENELAISDFRDHVLA 318
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
E DIED+ IG+ G CPY+ +R + +IV PY L+ R L + K+ ++I
Sbjct: 319 EVHDIEDIGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISLKDHVIII 378
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHNL + A+ S ++S L + + R+ ++ + N A + L
Sbjct: 379 DEAHNLMDVIANIHSVNVSLTQLRIGLEQL-----TIYARKYKARLKGKNRVYVAQVMRL 433
Query: 301 LLKLEKRIAEVPINSKEL--GFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQED 358
L + K + V + ++EL G P L++ + Q +KL + LQE
Sbjct: 434 LGSIAKYLESV-LAARELREGAVDPS----YLMSGKGVDQINLHKL-------SRYLQES 481
Query: 359 KLQNK-----KSTTACRIES--ISNILKIIFRDKG-----TAHSAYYRVHVREADANAAD 406
KL K +S+T+ ++ S + ++F+ + SA R+ + N D
Sbjct: 482 KLARKVDGYIESSTSLEEKNPETSTTVPVLFQVQSFLLSLMNPSAEGRLFF---EKNGND 538
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP---LRV 463
VL L + +P +E E ++IL GT+SPM + L LR
Sbjct: 539 VL-------LKYTLLDPTAHFREAVE-EARAVILAGGTMSPMSDYRDHLFSYLAPGQLRT 590
Query: 464 -ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
HVI + + A V G + ++ R+S +LG TI I + PDG++ F
Sbjct: 591 FSYGHVIPTSNLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKATPDGVVAF 650
Query: 523 FPSYYLMDQCIACWKN--TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD 580
FPSY ++Q + WK ++ GN +I + + K + E ++ ++ A+ A D
Sbjct: 651 FPSYDFLNQVVEIWKQPCSNSGN-PSILDSLGLVKPLLYESKEKAMNTEALLQKYANFID 709
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QS 638
GA+ +V GK+SEG++F+D GR V++ G+PFA + + + K +Y++ + +S
Sbjct: 710 EG-KGALLLSVMGGKLSEGINFSDRLGRGVIVIGLPFANIRSAEWQAKIQYVERKTYERS 768
Query: 639 QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
GGE + L+G D+Y R VNQ +GR IRH+HDY AI+ D R+ +S++
Sbjct: 769 SGGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQHDYAAILMFDRRYGTARIQSKL 828
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREE 726
WI+ + + G + L FF E+
Sbjct: 829 PEWIRRSL-VSAPIGATINNLYTFFEEK 855
Score = 47.8 bits (112), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
P+ YD Q+ +M + ++ + ESPTGTGK+L L+C +L W
Sbjct: 11 PYSPYDIQVQFMRSLYTCIEECKVGIFESPTGTGKSLSLICGSLTW 56
>gi|320034910|gb|EFW16853.1| ATP-dependent RNA helicase [Coccidioides posadasii str. Silveira]
Length = 905
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 191/688 (27%), Positives = 311/688 (45%), Gaps = 90/688 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP-----------------------------KMVILG 127
I Y SRTHSQL Q +EL+ + P K V LG
Sbjct: 241 IFYCSRTHSQLAQFARELRRVAFPPSIPPETEDGEIDTQGEGRRHPDTELEEPTKHVSLG 300
Query: 128 SREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD------- 180
SR+ +CI+ ++ L G+A R L + +N H A +N + D
Sbjct: 301 SRKTMCINPKIRRL-GNATAINERCLDLQSSNVLPEHKCPFAPSKENELAISDFRDHVLA 359
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
E DIED+ IG+ G CPY+ +R + +IV PY L+ R L + K+ ++I
Sbjct: 360 EVHDIEDIGKIGQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISLKDHVIII 419
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHNL + A+ S ++S L + + R+ ++ + N A + L
Sbjct: 420 DEAHNLMDVIANIHSVNVSLTQLRIGLEQL-----TIYARKYKARLKGKNRVYVAQVMRL 474
Query: 301 LLKLEKRIAEVPINSKEL--GFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQED 358
L + K + V + ++EL G P L++ + Q +KL + LQE
Sbjct: 475 LGSIAKYLESV-LAARELREGAVDPS----YLMSGKGVDQINLHKL-------SRYLQES 522
Query: 359 KLQNK-----KSTTACRIES--ISNILKIIFRDKG-----TAHSAYYRVHVREADANAAD 406
KL K +S+T+ ++ S + ++F+ + SA R+ + N D
Sbjct: 523 KLARKVDGYIESSTSLEEKNPETSTTVPVLFQVQSFLLSLMNPSAEGRLFF---EKNGND 579
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP---LRV 463
VL L + +P +E E ++IL GT+SPM + L LR
Sbjct: 580 VL-------LKYTLLDPTAHFREAVE-EARAVILAGGTMSPMSDYRDHLFSYLAPGQLRT 631
Query: 464 -ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
HVI + + A V G + ++ R+S +LG TI I + PDG++ F
Sbjct: 632 FSYGHVIPTSNLSARPVSRGILDTEFDFTFEKRNSRAMIIDLGKTISEICKATPDGVVAF 691
Query: 523 FPSYYLMDQCIACWKN--TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD 580
FPSY ++Q + WK ++ GN +I + + K + E ++ ++ A+ A D
Sbjct: 692 FPSYDFLNQVVEIWKQPCSNSGN-PSILDSLGLVKPLLYESKEKAMNTEALLQKYANFID 750
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QS 638
GA+ +V GK+SEG++F+D GR V++ G+PFA + + + K +Y++ + +S
Sbjct: 751 EG-KGALLLSVMGGKLSEGINFSDRLGRGVIVIGLPFANIRSAEWQAKIQYVERKTYERS 809
Query: 639 QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
GGE + L+G D+Y R VNQ +GR IRH+HDY AI+ D R+ +S++
Sbjct: 810 SGGEETRRSKAKLAGRDFYENACMRVVNQCIGRAIRHQHDYAAILMFDRRYGTARIQSKL 869
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREE 726
WI+ + + G + L FF E+
Sbjct: 870 PEWIRRSL-VSAPIGATINNLYTFFEEK 896
>gi|343425212|emb|CBQ68748.1| probable RAD3-DNA helicase/ATPase [Sporisorium reilianum SRZ2]
Length = 847
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 193/774 (24%), Positives = 348/774 (44%), Gaps = 110/774 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR-- 60
+ I + V FP+ + Y Q YM + ++L + +LE P+GTGKT+ LL ++++
Sbjct: 3 FYIDELPVLFPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQLF 62
Query: 61 ------------------KSLGSFSTLGS--QVNNQISGSQSSVNSSQSGDSKLP----- 95
K+L L N G +S V +++ S P
Sbjct: 63 HPAKRKLIYCSRTVPEIEKALAELKRLMEYRARYNVKEGEESEVLKNEAEGSNGPGEHNV 122
Query: 96 TILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACR--- 151
+ + Q+ ++ + L SR+ LCIH +VS R G + CR
Sbjct: 123 EMKGKGKAGGQMEDILA-----------LGLSSRKNLCIHPDVSRERKGKVVDARCRDMT 171
Query: 152 --FLCKKG-----TNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTR 204
+ C+KG T C+ H ++ M+ + +E++ R G CPYF R
Sbjct: 172 SSWACEKGRQDPGTVELCDFHEKLGK-MEPGQLIPQGVRTLEEVKEYARDKGICPYFAIR 230
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
+ VDI+ ++YL+DP + + E K++I++FDEAHN++ +C ++ S DL+ +L
Sbjct: 231 RMLPFVDIIIYSFHYLLDPKIAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPML 290
Query: 264 TAC---ISEAKNCID-ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV----PINS 315
+ I++ +D I T + DE ++ L + E+R AE P+
Sbjct: 291 DSAYRSINQLSEHVDEIKKTDASKLQDEYAR-----LVEGLQEQGEQREAESFMANPVLP 345
Query: 316 KEL------GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKS 365
+L G + + L +T +++ +V E A LQ K +K
Sbjct: 346 DDLLQEAVPGNIRRAEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIERKP 405
Query: 366 TTAC--RIESISNILKIIFRDKGTA--HSAYYRVHVREADANAADVLKGKASRT------ 415
C R+ + + L++ D+ +A A + V D +L+ +
Sbjct: 406 LRFCAERLRMLVSTLELTRLDEFSALQKVAAFATLVATYDKGFLLILEPFETENATVPNP 465
Query: 416 -LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
+ C + +A+ F R S+I+TSGT+SP+D + + LK + ++ +T +
Sbjct: 466 IFHFTCLDASLAIAPVFERF--SSVIITSGTISPLDMYPKMLKFDAIVQESYAMTLTRQC 523
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
++ G ++S + R+ + G+ ++ A+ VPDG++ FFPSY M+ +
Sbjct: 524 FLPLVITRGSDQVAISSRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFPSYLYMESIV 583
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
A W + G L +W K+K +E + +A+E+Y + GA+ +V R
Sbjct: 584 AAWHDM--GILDEVW----KYKLIFIETPDAPETSIALENYRRACDN--GRGAILLSVAR 635
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF + GRAV++ G+P+ ++ + E+L + + ++ L+F
Sbjct: 636 GKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEFLRDNFRIRENDF----LTF--- 688
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRV+R + DYG ++F D+RFA +++++ WI +I+
Sbjct: 689 ------DAMRHAAQCVGRVLRGKTDYGLMVFADKRFARADKRNKLPKWIAQYIK 736
>gi|219112193|ref|XP_002177848.1| xeroderma pigmentosum group D complementing protein [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217410733|gb|EEC50662.1| xeroderma pigmentosum group D complementing protein [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 782
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 202/790 (25%), Positives = 335/790 (42%), Gaps = 157/790 (19%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ + G+DV FP++ Y Q YM + QSL + LLE PTGTGKT+CLL
Sbjct: 3 FDLDGLDVFFPYDRIYLEQHQYMRALKQSLDAGGHCLLEMPTGTGKTVCLL--------- 53
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS-NYRP 121
S + S Q + ++Y +RT ++ V++EL T YR
Sbjct: 54 -------------------SLITSYQFANPSAGKLVYCTRTVPEMNHVMEELATVLAYRS 94
Query: 122 K--------------------------MVILGSREQLCIH-REVSLLRGSAQNNACRFLC 154
+ + L SR +C+H R ++ A + ACR L
Sbjct: 95 QELQRHQEENILPMDTDGDIENVPVAGTLCLSSRRNMCVHERVMAESDREAVDAACRSLT 154
Query: 155 ----------KKGTNRRCNHHSRVADYMKNNPHLGDEPI-------DIEDLVNIGRTFGP 197
+ G+ C+++ +N H E D+E+L G+ G
Sbjct: 155 ASWVLEEAQKRPGSIETCSYY--------DNFHAAGESTSMPSGVYDLEELQKWGKRRGW 206
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK-NSILIFDEAHNLEGICADAASF 256
CPY++TR+ +I+ Y Y++DP K + E + SI++FDEAHN++ +C +A S
Sbjct: 207 CPYYLTRQAINHANILVFNYQYMLDPKVAKMVSKELEAESIVVFDEAHNIDSVCIEALSV 266
Query: 257 DLSS-GLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++ GL A S + ++S R S ++ L + ++ L +++ + + P N
Sbjct: 267 TINDRGLEQATRSLGRLSSEVS--RLKASDNQRLQTEYQNLVNGL---IDQGLLDAPAND 321
Query: 316 KELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQE------------------ 357
L P + NI + A I ++ E L+
Sbjct: 322 AGLTSNVLNPDVLNEAVPGNIRR--AEHFIGFMKKVVEHLKARLRSVAGPNGGVRSETPL 379
Query: 358 ---DKLQNKKSTTA-------CRIESISNILKIIFRDK-----GTAHSAYYRVHVREADA 402
++ N S A R+ S+ L++ D A + E A
Sbjct: 380 AFLHRMTNGTSLEAKPLRFAYSRLSSLLRTLQVSNLDDFNSLTDVADFSSLLAAYSEGVA 439
Query: 403 NAADVLK-------GKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQE 454
A +++ G + C + +A+ F R GS+I+TSGTLSP+D + +
Sbjct: 440 KFAIIMEPNGSSIPGATDPVIQLVCLDSSLAIAPLFKRF--GSVIITSGTLSPIDLYPKL 497
Query: 455 LKLNFPLRVENPHVITSKQ-IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
L+ P E+ + T + I ++ G +++ Y +R + + G +V +
Sbjct: 498 LQFE-PCVSESLSMSTFRPCIRPLVITKGSDQLAVSTKYEDRGDMGVIRNYGTMLVELCS 556
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
+PDG++ FF SY M+ I+ W + I + K K +E + LA+++
Sbjct: 557 TIPDGVVAFFTSYSYMESLISEW------DAIGILRELTKSKLVFIETKDVVETTLALDN 610
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y + GAVF +V RGKVSEG++F H GRAV++ G+PF +R + EYL
Sbjct: 611 Y--RRACDCGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHTLRARLEYLQ 668
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
Q + +D+ N A R +Q VGRVIR + DYG +IF D R+
Sbjct: 669 THYQ-------------IREQDFLNFDAIRQASQCVGRVIRSKTDYGLMIFADSRYNRHD 715
Query: 694 RKSQISLWIQ 703
++S++ WIQ
Sbjct: 716 KRSKLPKWIQ 725
>gi|126140148|ref|XP_001386596.1| DNA helicase component of transcription factor b [Scheffersomyces
stipitis CBS 6054]
gi|126093880|gb|ABN68567.1| DNA helicase component of transcription factor b [Scheffersomyces
stipitis CBS 6054]
Length = 793
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 197/760 (25%), Positives = 335/760 (44%), Gaps = 118/760 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K +R
Sbjct: 60 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRS 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCK--------KG------ 157
+ + L SR+ LC+H +S R G+ + CR + KG
Sbjct: 95 TELGYVEEFRGLGLTSRKNLCVHPTISQERKGNVVDEKCRRITNGQLKERIAKGLVTPDQ 154
Query: 158 ------TNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
N C+ H + D M + + + L+ + G CPYF R + +
Sbjct: 155 EVNHAEANTLCDMHENMND-MDQHNLIPAGVYSFDALIKYCKQEGTCPYFTVRRMIPFCN 213
Query: 212 IVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
I+ Y+YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL+ L A
Sbjct: 214 IIIYSYHYLLDPKIAERVSKELSKDSIIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGA 273
Query: 271 KNCIDISSTRRGQSSDETLNPDNFAI--LR-ALLLKLEKRIAEVPINSKEL------GFT 321
D + S++ N + LR A + + E+ P ++L G
Sbjct: 274 NKLGDAVDEMKAHDSEKLQNEYEKLVEGLRQAEIARDEELFMSNPTLPQDLLDEAIPGNI 333
Query: 322 KPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTACRIESISNI 377
+ + L +T K++ ++ E LQ K ++K C E +S +
Sbjct: 334 RKAEHFISFLKRFIEYLKTRMKVLHVISETPISFLQHLKELTFIDRKPLRFCS-ERLSLL 392
Query: 378 LKII-FRDKGTAHS----AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGI 425
++ + + H+ A + V D +L+ S L + C + I
Sbjct: 393 VRTLELSEIEDFHALKDIATFATLVSTYDTGFQLILEPFESEGSTVPNPILHFICLDASI 452
Query: 426 AMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVG 482
A++ F R S+I+TSGT+SP+D + + +NF ++ + +T + IV G
Sbjct: 453 AIKPVFERF--SSVIITSGTISPLDMYPK--MMNFQTVIQESYTMTLARRSFLPMIVTKG 508
Query: 483 PSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHG 542
++S + R+ + G+ ++ ++I PDG+++FFPSY M+ I+ W+ + G
Sbjct: 509 SDQVSISSRFEIRNDPSVVRNYGSLLIEFSKITPDGMVVFFPSYLYMESIISMWQ--TMG 566
Query: 543 NLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDF 602
L +W K+K +VE + LA+E Y ++ GAV +V RGKVSEG+DF
Sbjct: 567 VLDEVW----KYKLILVETPDAQETSLALETYRKAC--SNGRGAVLLSVARGKVSEGIDF 620
Query: 603 ADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQAS 662
H GR V++ G+PF ++ + E++ Q + ++ LSF A
Sbjct: 621 DHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIRENDF----LSF---------DAM 667
Query: 663 RAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
R Q +GRV+R + DYG ++ D RF+ +K+Q+ WI
Sbjct: 668 RHAAQCLGRVLRGKDDYGIMVLADRRFS--KKKNQLPKWI 705
>gi|50556538|ref|XP_505677.1| YALI0F20746p [Yarrowia lipolytica]
gi|49651547|emb|CAG78486.1| YALI0F20746p [Yarrowia lipolytica CLIB122]
Length = 785
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 196/752 (26%), Positives = 327/752 (43%), Gaps = 105/752 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V +P+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+++
Sbjct: 3 FYIDDLPVLWPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
I+Y SRT S++ + + ELK
Sbjct: 63 YPEHRK----------------------------IIYCSRTMSEIEKALAELKNLMKFRT 94
Query: 116 -TSNYRPKMVILG--SREQLCIHREVSL-LRGSAQNNACRFLCKKGTNRR---------C 162
T + LG SR+ LC++ V +G + CR + ++ C
Sbjct: 95 ETLGFEEDFRGLGLTSRKNLCLNPNVRYEKKGYIVDEKCRAMTSGIAKQKLAAGEDVTLC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D +N ++ ED++ G CPYF R + +++ Y+YL+D
Sbjct: 155 EYHENMNDIEPHN-YIPPGVFTFEDILAYGEEHKTCPYFTVRRMMAFCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + E K+ I+IFDEAHN++ +C +A S D++ L A + S R
Sbjct: 214 PKIADRVSKELSKDCIVIFDEAHNIDNVCIEALSVDITEDSLKRATRGANHLAKKVSEAR 273
Query: 282 GQSSDETLNPDNFAI--LRALLL-KLEKRIAEVPINSKEL------GFTKPGPYIYELLA 332
S++ N N + LR L + E P+ ++L G + + L
Sbjct: 274 SSDSEKLKNEYNKLVDGLRDLESGEQEDTFLANPVLPEDLISEAVPGNIRKAEHFVAFLK 333
Query: 333 DLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKIIFRDKG 386
++ K++ ++ E A L+ + +K C R+ + L++ D
Sbjct: 334 RFIEYLKSRMKVLHVISETPASFLKHLRDLTYIERKPLRFCAERLSYLVRTLELTHVDDY 393
Query: 387 TA--HSAYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIAMQE-FSRLEVG 436
TA A + V D +L+ + L C + IA++ F R
Sbjct: 394 TALKEIAVFATLVSTYDTGFQLILEPFETDQATVPNPILHLTCLDASIAIKPVFDRF--S 451
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGPSGYLLNSSYRN 494
SII+TSGT+SP+D + + LNF V+ + +T + IV G ++S +
Sbjct: 452 SIIITSGTISPLDMYPK--MLNFETVVQESYTMTLARRAFCPLIVTKGSDQVAISSRFEI 509
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+ + GN ++ ++I PDGL++FFPSY M+ I+ W+ + G L +W K+
Sbjct: 510 RNDPSVVRNYGNLLIEFSKITPDGLVVFFPSYLYMESIISMWQ--TMGILDEVW----KY 563
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K +VE + LA+E Y ++ GAV V RGKVSEG+DF GR V++ G
Sbjct: 564 KLILVETPDAQETSLALETYRTAC--SNGRGAVMLCVARGKVSEGIDFDHQFGRTVLMIG 621
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+PF ++ + E+L + ++ LSF A R Q +GRV+R
Sbjct: 622 VPFQYTESRILKARLEFLRDNYHIRENDF----LSF---------DAMRHAAQCLGRVLR 668
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ DYG ++ D RFA +++Q+ WI I
Sbjct: 669 GKDDYGVMVLADRRFA--KKRNQLPKWINQAI 698
>gi|71020135|ref|XP_760298.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
gi|46100007|gb|EAK85240.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
Length = 850
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 194/770 (25%), Positives = 353/770 (45%), Gaps = 102/770 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FYIDELPVLFPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTIL-YTSRTHSQLRQ---VIQELKTSN 118
++ +V + ++L ++ Y +R + Q Q V+++ S+
Sbjct: 63 --------HPAKRKLIYCSRTVPEIEKALAELKRLMEYRARYNVQQDQASGVLKKESQSS 114
Query: 119 YRP------------------KMVILG--SREQLCIHREVSLLR-GSAQNNACR-----F 152
RP ++ LG SR+ LCIH +VS R G + CR +
Sbjct: 115 DRPGEHNIEMNGKGNTGSQMEDILALGLSSRKNLCIHPDVSRERKGKVVDARCRDMTSSW 174
Query: 153 LCKKGTN-----RRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQ 207
C+KG CN H + M+ + +E++ R CPYF R +
Sbjct: 175 ACEKGRQDPGSVELCNFHEELGK-MEPGQLIPQGVWTLEEVKEYAREKAICPYFAIRRMM 233
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
VDI+ ++YL+DP + + E K++I++FDEAHN++ +C ++ S DL+ +L +
Sbjct: 234 PFVDIIIYSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPMLDS- 292
Query: 267 ISEAKNCIDISSTRRGQ--SSDETLNPDNFA-ILRALLLKLEKRIAEV----PINSKEL- 318
A I+ S R + +D + D +A ++ L + E+R AE P+ +L
Sbjct: 293 ---AYRSINQLSERVDEIKKTDASKLQDEYARLVEGLQQQGEQREAESFMANPVLPDDLL 349
Query: 319 -----GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC 369
G + + L +T +++ +V E A LQ K +K C
Sbjct: 350 QEAVPGNIRRAEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIERKPLRFC 409
Query: 370 --RIESISNILKIIFRDKGTA--HSAYYRVHVREADANAADVLKGKASRT-------LSW 418
R+ + L++ D+ +A A + V D +L+ + +
Sbjct: 410 AERLRMLVGTLELTRLDEFSALQKVAAFATLVATYDKGFLLILEPFETENATVPNPIFHF 469
Query: 419 WCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAG 477
C + +A+ F R S+I+TSGT+SP+D + + LK + ++ +T +
Sbjct: 470 TCLDASLAIAPVFERF--SSVIITSGTISPLDMYPKMLKFDAIVQESYAMTLTRQCFLPL 527
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
++ G ++S + R+ + G+ ++ A+ VPDG++ FFPSY M+ +A W
Sbjct: 528 VITRGSDQVAISSRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFPSYLYMESIVAAWH 587
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
+ G L +W K+K +E + +A+E+Y + GA+ +V RGKVS
Sbjct: 588 DM--GILDEVW----KYKLIFIETPDAPETSIALENYRRACDN--GRGAILLSVARGKVS 639
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EG+DF + GRAV++ G+P+ ++ + E+L + + ++ L+F
Sbjct: 640 EGIDFDHNYGRAVIMFGVPYQYTESRILKARLEFLRDNFRIRENDF----LTF------- 688
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRV+R + DYG ++F D+RFA +++++ WI +I+
Sbjct: 689 --DAMRHAAQCVGRVLRGKTDYGLMVFADKRFARADKRNKLPKWIAQYIK 736
>gi|296211273|ref|XP_002752340.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Callithrix jacchus]
Length = 903
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 175/697 (25%), Positives = 306/697 (43%), Gaps = 93/697 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
+ Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 VYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCKK------------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGR 193
+ + RR + Y N+ +G DE + DIE L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRPEKQAACPFY--NHEQMGLLRDEALAEVKDIEQLLALGK 345
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADA 253
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL
Sbjct: 346 EARACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGM 405
Query: 254 ASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPI 313
S ++S L S+ ++ S R L N L+ +L LEK +A +
Sbjct: 406 HSVEVSGSQLCQAYSQLLQYMERYSKR--------LKAKNLMYLKQILYLLEKFVAMLGG 457
Query: 314 NSKE----LGFTKPGPYIYEL--------LADLNITQETAY--------KLIDIVEVAAE 353
N K+ ++ G + + + ++N+ + Y KL E
Sbjct: 458 NIKQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMVSRKLFGFTERYGA 517
Query: 354 LLQEDKLQNKKSTTACRIESISNILKIIFRDKGTA----------HSAYYRVHVREADAN 403
+L + Q K + ++S+ + D+ A H + + A+ +
Sbjct: 518 VL-SSREQPKLAGFQQFLQSLQPKATEVPADESPATALRPASPLMHIEGFLAALTTANQD 576
Query: 404 AADVLKGKAS---RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF- 459
+L + S +L + NP + + + E ++++ GT+ P+ F Q+L
Sbjct: 577 GRVILSRQGSLSQSSLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAG 635
Query: 460 --PLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
P RV HVI I ++ G S L +++ R+ + E G + N+ +
Sbjct: 636 VEPERVVEFSCGHVIPPDNILPLVICSGISSQPLEFTFQKRELPQMMDEAGGILCNLCGV 695
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
VP G++ FFPSY + Q W+ + +R+ KK EP+ + + Y
Sbjct: 696 VPGGVVCFFPSYEYLRQVHTHWEKGG------LLDRLAARKKIFQEPKSTHQVEQVLLAY 749
Query: 575 MAKLKDTS-----TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
++ +GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K
Sbjct: 750 SRCIQGCGQERGRVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKM 809
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
YLD G+ G+ +AVNQ++GR IRH+ D+ +I+ D+R+
Sbjct: 810 AYLDQTLPRAPGQAP-------PGKALVENLCMKAVNQSIGRAIRHQRDFASIVLLDQRY 862
Query: 690 AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
A P +++ WIQ ++ + FG + + +F RE+
Sbjct: 863 ARPPVLAKLPAWIQARVEVKAAFGPAIAAVQKFHREK 899
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K GI FPF Y Q +M ++ + L + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKAGGIHFPFPFTPYSIQKDFMAELYRVLDAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|384251189|gb|EIE24667.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 827
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 190/688 (27%), Positives = 314/688 (45%), Gaps = 87/688 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKMVI--LGSREQLCIHREVSLLRGSAQNNACRFLC 154
+ + SRTHSQL Q + EL + + + + SR+ LCI+ V L + + N
Sbjct: 165 VYFCSRTHSQLSQFVSELHRTPFAASFSVATVASRKALCINDSVQRLGNATRINEKCLDL 224
Query: 155 KKGTNRR-------------CNHHS----RVADYMKNNPHLGDE----PIDIEDLVNIGR 193
+ G R+ HS R A+ M + L D P+D+ED+ +GR
Sbjct: 225 QSGKGRKKVVTEAQGNTKASSKSHSGCPFRKAN-MTSQRQLKDTVLAMPMDVEDMARLGR 283
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADA 253
CPY+ R D+V PY L+ R+ LGV + ++++ DEAHNL DA
Sbjct: 284 RKELCPYYAARAALPEADLVLLPYPALLLKETRESLGVRLEGNVVVVDEAHNL----VDA 339
Query: 254 ASFDLSSGLLTAC-ISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
+ ++ S L+TA ++ A + ++ S +R ++ N + L L L+K P
Sbjct: 340 VN-NVHSALITAQQLATAHSALE-SYYQRFRALLAPGNSKHIQTLMCLASTLQK-CWNRP 396
Query: 313 INSKELGFTKPGPYIYEL-LADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
+ +++ + L ++N ++LI ++ + L++ + S A
Sbjct: 397 SGAAGTRLDTVNDFLFSMELDNMNF-----FRLIRYIKESKVLVKIAGYADATSARAGDE 451
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVREADANAAD----VLKGKASRTLSWWCFNPGIAM 427
+ + D G+ S+ + + + N AD ++ A++TL + N G
Sbjct: 452 VTPNATDGQTQSDGGSGMSSLHALVGLASALNNADADGRIIVDTAAKTLKFVLLNAGAHF 511
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL----RVENPHVITSKQIWAGIVPVGP 483
+ +++L SGTL+P+ S Q+L P + HV+ +++ A + GP
Sbjct: 512 VQV-LASAHAVVLASGTLAPVSSLKQQLFPGLPATQLHQFSCGHVVPKERLLAVALGRGP 570
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
+G L+ + R E+G + NI + VP G++ FFPS+ D A W+ S G
Sbjct: 571 TGATLDLRHEQRAQSSSMDEIGTLLTNICQAVPQGVVAFFPSFAYADAVYAHWQ--SSGA 628
Query: 544 LTTIWERICKHKKPVV-EPRQS-----------SLFPLAIEDYMAKLKDTSTSGAVFFAV 591
L + + KK V EPR S SL+ +A ++A++ + SGA+ V
Sbjct: 629 LAAL-----RSKKHVFREPRSSVEVEAVLRQVSSLYHIA---HLAQM-EKGPSGALLLCV 679
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK---- 647
GK+SEG++FAD GR VV+ GMPF TDP++ + ++D A S +T
Sbjct: 680 VGGKMSEGINFADGMGRCVVMVGMPFPNPTDPELCERMRFMDTCAASTPAACTDTSSAAG 739
Query: 648 -----LSFLS-GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA-----HPSRKS 696
+S S G +++ +AVNQ +GRVIRHR D+ AI+ D R+ P RK
Sbjct: 740 DGVAPISASSPGREYFEDLCMKAVNQCIGRVIRHRGDWAAILLADVRWTAGGANKPLRK- 798
Query: 697 QISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+ WIQ + S FGD + RF R
Sbjct: 799 -LPGWIQESLVVASGFGDAYSRIRRFVR 825
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M+ + LQ LLESPTGTGKTL L+C+TL W
Sbjct: 1 MQHLYSVLQTGGVGLLESPTGTGKTLSLICSTLQW 35
>gi|427782715|gb|JAA56809.1| Putative excision repair cross-complementing rodent repair
deficiency complementation group 2 [Rhipicephalus
pulchellus]
Length = 718
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 189/743 (25%), Positives = 333/743 (44%), Gaps = 123/743 (16%)
Query: 43 PTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
P+GTGKT+ LL LA++K+ + + +LY SR
Sbjct: 2 PSGTGKTVTLLSLILAYQKA---------------------------NPAMISKLLYCSR 34
Query: 103 THSQLRQVIQELK--TSNYRPK----MVILG----SREQLCIHREVSLLR-GSAQNNACR 151
T ++ +V++EL+ +Y+ + M +LG SR+ LCIH +VSL R G + C
Sbjct: 35 TLPEIEKVVEELRRLLEHYKRETGEDMDLLGLCLTSRKNLCIHPQVSLERDGRVVDGRCF 94
Query: 152 FLCKKGTNRRC---NHHSRVADYMKNNPHLG-DEPI-----DIEDLVNIGRTFGPCPYFM 202
L + RR + ++ + +N G D P+ ++DL GR CPYF+
Sbjct: 95 SL--TASYRRAQATDPETQCCTFFENFDSQGRDIPLPTGIYSVDDLKEYGRERQLCPYFV 152
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSG 261
R+ +V Y+YL+DP + + E +N+++IFDEAHN++ +C ++ S L+
Sbjct: 153 ARQAVLNAKVVVYSYHYLLDPKIAEVVSKEMSRNAVVIFDEAHNIDNVCIESMSVRLTKR 212
Query: 262 LLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV----PINSKE 317
+ + N +D + + E L + +L L E R A++ P+ E
Sbjct: 213 TIEGSMENIDN-LDHTIKELKEQDAEKLRTEYEQLLEGLRQAKEAREADLILANPVLPDE 271
Query: 318 -LGFTKPG----------------PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
L PG Y+ + ++ QE+ + ++LQ+ L
Sbjct: 272 VLEEAVPGNIRLAEHFVSFLRRLVEYVKMRMRAQHMVQESPAAFLK------DILQKVCL 325
Query: 361 QNKK-STTACRIESISNILKII-------------FRDKGTAHSAYYRVHVREADANAAD 406
+ K +A R+ S+ L++ F + ++ + + V D +
Sbjct: 326 ERKPLRFSAERLRSLLRTLEVPDPTNFSPLVRLCHFASLVSTYTKGFTIIVEPYDERSP- 384
Query: 407 VLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN 465
G + ++ C + ++++ F+R + S+I+TSGTLSP++ + + L +
Sbjct: 385 ---GVPNPVINLSCMDASLSIKPVFNRFQ--SVIITSGTLSPVEMYPKILDFRPVVSASL 439
Query: 466 PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
+ I IV G L+S + R+ + + G +V +A VPDGL+ FF S
Sbjct: 440 SITLARPSICPLIVSKGSDQVALSSRFETREEVSVVRNYGALLVELASCVPDGLVCFFTS 499
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSG 585
Y ++ +A W + +++ + K +E ++ LA+ +Y+ ++ G
Sbjct: 500 YVYLESVVAAWYEQG------VLDQLQRRKLLFLETPDAAETALALANYVKACENGR--G 551
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKE 645
AV +V RGKVSEG+DF H GRAV++ G+PF +R + E+L Q Q
Sbjct: 552 AVLLSVARGKVSEGVDFDHHLGRAVLMFGIPFVYTQSRILRARLEFLRDQFQ-------- 603
Query: 646 TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPH 705
+ D+ A R Q VGR +R + DYG +IF D+RF+ ++S++ WIQ H
Sbjct: 604 -----IRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRWDKRSKLPRWIQEH 658
Query: 706 IQ---CYSKFGDVVYTLTRFFRE 725
+Q C + + + RF R+
Sbjct: 659 LQDSLCNLSTEEALQVVKRFLRQ 681
>gi|403351116|gb|EJY75039.1| putative: regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1087
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 189/354 (53%), Gaps = 28/354 (7%)
Query: 373 SISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSR 432
+++N + DK + + +Y E ++ R ++ WCFNP A Q
Sbjct: 423 TVNNYGNKVTHDKRSGYYDFYMCIFEEQHGYT------QSKRKIALWCFNPSFAFQSLLE 476
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAGIVPVGPSGYLLNSS 491
+ +II +SGTL+P+ ++ EL+ FP+++EN HVI Q+ I+ + S
Sbjct: 477 EKPRNIIFSSGTLAPLHTYESELETTFPIKLENDHVIDKDSQVMVSILTHDIDNKQIQFS 536
Query: 492 YRNRDSIEYKQELGNTIVNI-ARIVPDGLLIFFPSYYLMDQCIACWK-NTSHGNLTTIWE 549
+ R+ + + T+ I A++ G+L+F PSY ++ + W+ N + +L W+
Sbjct: 537 FEKREDLNFYLVFARTLARIFAKVHQGGILVFLPSYTVLKKLHKVWRDNKLYKDLFKQWD 596
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
+ P + + S+LF EDY ++ + AVF AVCRGK+SEG+DF D R
Sbjct: 597 IFIE---PQDQVKNSALF----EDYKRAIQ--TQKRAVFIAVCRGKLSEGIDFTDDVARC 647
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V++ G+P+ + DPKV K++YLD + +QG S ++G WY QA RA+NQA+
Sbjct: 648 VIMAGIPYPQIYDPKVITKKDYLD-RKYAQGK-------SIINGNQWYKLQACRAINQAI 699
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
GRVIRH +D+GAII DER+ S +IS W+ + Y++F D+ L FF
Sbjct: 700 GRVIRHINDFGAIILMDERYV--SHNIEISKWLNLRKKIYNQFVDLEVDLENFF 751
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 112/289 (38%), Gaps = 95/289 (32%)
Query: 5 KIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
K+ + V+FPFE Y CQL K++Q+ Q L + CLL
Sbjct: 16 KLSDVSVKFPFEKPYQCQL----KMMQAEQQGTIDLESDQEDNEEETCLL---------- 61
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLP-TILYTSRTHSQLRQVIQELKTS-NYRP 121
+P TI+Y +RTHSQ+ Q+ +E+K Y
Sbjct: 62 -----------------------------DIPSTIIYCTRTHSQINQIFEEIKLRLPYVL 92
Query: 122 KMVILGSREQLCIHREV-SLLRGSAQNNACRFLCKKGT-NRRCNHH-----SRVADYMKN 174
++ SR+Q CI + G++ N +C+ L K T ++ N +++ KN
Sbjct: 93 RVSPFASRKQSCIFENLPEQFPGNSLNLSCKLLRKLNTIQQKLNKDATLKLTKLKSGSKN 152
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFM------------------------TRELQKTV 210
+ D+ + + + G CP++ + + K++
Sbjct: 153 DIENCDQQVSV---IKSG-----CPFYYGYSFENKMSMKQSEPKQFGQIIISSAQQDKSI 204
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
++V + PW +S++IFDE HN++ C + +FD+S
Sbjct: 205 NLVASQI-----PW-----DQPLSDSVIIFDEGHNIDTFCEELFTFDIS 243
>gi|384483940|gb|EIE76120.1| hypothetical protein RO3G_00824 [Rhizopus delemar RA 99-880]
Length = 762
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 204/417 (48%), Gaps = 71/417 (17%)
Query: 371 IESISNILKIIFRDKGTAHSAYYRVHV--READANAADVLKGKASRT----------LSW 418
++ I + +FR K + YR+ + R+ N +V K S +S+
Sbjct: 144 VQGIFMVFGFLFR-KDRDYVQDYRMALMKRKEKGNELNVAHSKKSAKSTQDSLWSYKISF 202
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGI 478
WC NPGI Q+ E S+ILTSGTLSPM++FA EL+ +FP
Sbjct: 203 WCLNPGIIFQDMC-AETRSVILTSGTLSPMETFASELETDFP------------------ 243
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
+G L Y N +S Y+ ++G I I VP G+L F PSY +D+ + W
Sbjct: 244 -----NGAHLRGVYSNIESFRYQDDVGEAISQIVETVPFGILCFLPSYNALDKLMQRW-- 296
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSL--FPLAIE------DYMAKLKDTSTSGAVFFA 590
LT E I + K +EPR S F I D + D GA+FFA
Sbjct: 297 ----TLTGTLEHIKRKKFVFLEPRGSDKKKFERVINAFYDQIDELVDCSDDEKDGAIFFA 352
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ--GGEYKETKL 648
V RGKVSEG+DF+D RAV+ G+P+ + D +V LK+EY DL+ ++Q GG
Sbjct: 353 VYRGKVSEGVDFSDAYCRAVIALGLPYPGLKDIEVSLKKEYNDLKQRTQHHGG------- 405
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
++G DWY QA RA+NQA+GR IRH++D+GAII ++RF +S WI+ +
Sbjct: 406 -VMNGRDWYATQAYRAMNQALGRCIRHKNDWGAIILLEDRFQESEHIKGLSKWIRNRVHI 464
Query: 709 YSKFGDVVYTLTRF------FREERICGS----TNLKLIKTEVSGDVRELKPVDLLD 755
+ F + + +L F ++ I + TN + I + + DV +K D+ D
Sbjct: 465 HESFNEGISSLKEFVDHRLSIEQQSIIPNSDMPTNNQTITQQATIDVSAIKNEDMSD 521
>gi|410963605|ref|XP_003988355.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Felis catus]
Length = 907
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 180/698 (25%), Positives = 312/698 (44%), Gaps = 93/698 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC-- 150
I Y SRTHSQL Q + E++ S + ++V LGSR+ LCI+ +V L GSAQ N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCINEDVKNL-GSAQLINDRCME 287
Query: 151 ----------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-----DIEDLVNIGRTF 195
R +K RR H + Y L + + DIE LV++G+
Sbjct: 288 MQRSKHGKKSRAEDEKPKRRRQEHQAACPFYSYEQLQLLRDEVLVGVKDIEQLVSLGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ + +++ DEAHNL
Sbjct: 348 RACPYYGSRFAIPAAQLVVLPYQMLLHGATRQAAGIRLQGQVVVIDEAHNL--------- 398
Query: 256 FDLSSGLLTACISEAKNCIDISST-RRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
D +G+ +A +S ++ C S + + + L N ++ LL LE+ + + N
Sbjct: 399 IDTITGIYSAEVSGSQFCQAHSQLLQYMERYGKRLKAKNLMYIKQLLYLLEQFVTVLGGN 458
Query: 315 SKELGFTKP-----------GPYIYELLAD-LNITQETAY--------KLIDIVEVAAEL 354
K+ T+ ++++ D +N+ + Y KL E +
Sbjct: 459 IKQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVRRYCEKSMVSRKLFGFTERYGTV 518
Query: 355 LQEDKLQNKKSTTACRIESISNILK---IIFRDKGTAH---SAYYRVHVR-------EAD 401
L + Q++ + ++S+ L + D+G A SA +H+ A+
Sbjct: 519 LASSREQSRLAGFQHFLQSLQPALTETPVPHGDEGEARVPRSASPLMHIEGFLAALTTAN 578
Query: 402 ANAADVLKGKASRTLSWWCF---NPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN 458
+ +L + S +LS F NP + + + E ++++ GT+ P+ F ++L
Sbjct: 579 QDGRVILNRQGSLSLSSLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFREQLLAC 637
Query: 459 FPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
+ E HVI I ++ GPS L +Y+ R+ + E G + N+
Sbjct: 638 AGVEAERVVEFSCGHVIPPDNILPLVICSGPSSQQLEFTYQKRELPQMMDETGRILYNLC 697
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIE 572
+VP G++ FFPSY Q A W + + R+ KK EP++++ +
Sbjct: 698 NVVPGGVVCFFPSYEYQRQVHAHWDKSG------LLARLAVRKKIFQEPKRANQVEQVLL 751
Query: 573 DYMAKLK-----DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRL 627
+Y +K + +GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++
Sbjct: 752 EYSRCIKCCGHAGGAVTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQE 811
Query: 628 KREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDE 687
K YLD G+ G+ +AVNQ++GR IRH+ D+ +I+ D
Sbjct: 812 KMAYLDQTLPRIPGQPP-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDH 864
Query: 688 RFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
R+A P ++ WI+ ++ + FG + +F RE
Sbjct: 865 RYARPPVLGKLPAWIRDRVEVKATFGPAFAAMRKFHRE 902
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 8 GIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
GI FPF Y Q +M ++ + L + ESPTGTGK+L L+C L+W +
Sbjct: 10 GIHFPFPFTPYSIQKDFMAELYRVLDAGKIGIFESPTGTGKSLSLICGALSWLRDF 65
>gi|356522168|ref|XP_003529720.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Glycine max]
Length = 897
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 192/722 (26%), Positives = 326/722 (45%), Gaps = 105/722 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRGSAQ-NNACRFL 153
+ + SRTHSQL Q I+EL+ + + +M V LGSR+ LCI+ EV L S + N C L
Sbjct: 190 VYFCSRTHSQLSQFIKELRRTVFANEMNVVSLGSRKNLCINEEVVALGNSTRINERCLEL 249
Query: 154 CKKGTNRR------------CNHHSRVADYMKNNPHLGDE---------PIDIEDLVNIG 192
KK N C + M + E P+DIEDL N+G
Sbjct: 250 QKKKKNEATKVKNLKVGAGVCRTKASSGCPMLRKHRVQQEFRNEVSQQGPLDIEDLANLG 309
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
RT G CPY+ +R L + D+V PY L+ R+ LG+ K++I+I DEAHNL +
Sbjct: 310 RTMGACPYYGSRSLVQGADLVVLPYQSLLSKSSRETLGLNLKSNIIIIDEAHNLADSLIN 369
Query: 253 AASFDLSSGLLTACISEAKNCIDISSTRRGQSSD---ETLNPDNFAILRALL----LKLE 305
++S L + + G ++ +TL A LRALL L+
Sbjct: 370 MYDSKITSSQLEIVHRHVERYFERFRNLLGPANRRYIQTLMVLMRAFLRALLDDKDGNLK 429
Query: 306 KRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKS 365
+ S+E G I + L +LNI KL+ ++ + ++ + +K
Sbjct: 430 DSCRDTAQASEESGACDFTMAINDFLFELNIDNINLVKLLKYIK-ESNIMHKVNGYGEKV 488
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRV-----HVREADANAADVLKGKASRTLSWWC 420
T +I +I I + ++G+ SA+ + + D + ++ S +
Sbjct: 489 ATLAKIPAIHIIGEQA--EEGSCISAFQALADILLSLTNNDGDGRIIISRSRSTSFKKQG 546
Query: 421 FNPGIAM----QEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLRVENP-------H 467
+ M + FS + E +++L GTL P++ + L FP N H
Sbjct: 547 GHIKYVMLSGEKIFSEIVDEAHAVVLVGGTLQPIEETRERL---FPWLPPNQLHFFSCGH 603
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
++ I V GP+G + S+ +R S + +ELG + N+ +V +G+++FFPS+
Sbjct: 604 IVPPDSIMPIAVTRGPTGRSFDFSFSSRSSPDMMRELGLLLCNLVTVVHEGIVVFFPSFD 663
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT------ 581
++ WK++ I ERI K K+ EPR + + +E + + KDT
Sbjct: 664 YENRVYEHWKSSG------ILERIIKRKRVFREPRNN----MDVESVLKEYKDTIDTISV 713
Query: 582 --------STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYL- 632
S +GA+ AV K+SEG++ +D GR +V+ G+P+ + +D ++ + +++
Sbjct: 714 MNSEVNQASHNGAILLAVVGAKLSEGINLSDGMGRCIVMVGLPYPSPSDIELLERIKHIE 773
Query: 633 -----------------DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
DL + G + + G+++Y +AVNQ++GR IRH
Sbjct: 774 GFRNLKLPENPSVSSSYDLYSGDVQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRH 833
Query: 676 RHDYGAIIFCDERFAHPSRK-------SQISLWIQPH-IQCYSKFGDVVYTLTRFFREER 727
+DY AI+ D R+A S K +++ WI+ + +G+V L +FF+ ++
Sbjct: 834 INDYAAILLVDTRYASDSSKRSFSHPVTKLPQWIKDRFVSSTINYGEVHRLLHQFFKLKK 893
Query: 728 IC 729
C
Sbjct: 894 TC 895
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPFE Y Q+ +M + +SL ++LESPTGTGKT+ ++C+ L W
Sbjct: 13 FPFEPYSIQIDFMNSLYESLNQGGVSMLESPTGTGKTMSVICSALQW 59
>gi|71029556|ref|XP_764421.1| DNA repair helicase [Theileria parva strain Muguga]
gi|68351375|gb|EAN32138.1| DNA repair helicase, putative [Theileria parva]
Length = 962
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 182/332 (54%), Gaps = 21/332 (6%)
Query: 414 RTLSWWCFNPGIAMQEFSRLEVG---SIILTSGTLSPMDSFAQEL---KLNFPLRVENPH 467
+ ++ C P + F RL+ G SIILTSGTL P++ + L + F ++++N H
Sbjct: 531 KVFTFKCLQP---VPTFVRLKNGGVRSIILTSGTLGPLEVLERHLGGGHVKFDVKLQNEH 587
Query: 468 VITSKQIWAGIVPVGPSG-YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
VI ++W G + +L+S++ R+ + Y ELGN +++ + VP G+L+FF SY
Sbjct: 588 VIDPSRVWVGAISGNAEDPNMLSSTFNTRNKMNYITELGNAVLSFVKNVPGGVLVFFGSY 647
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STS 584
+M+ + WK + +++RI +PV P P+ + K K +
Sbjct: 648 SVMNYTASVWKKIGIYSKIEMFKRIYLEARPVENPDDKDAIPVTTMEIFEKYKQNIDQGN 707
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
G+VFFA+CRG+++EG+DF+D R + + G+P+ + D LK +YLD + Y+
Sbjct: 708 GSVFFAICRGRLAEGIDFSDDYCRGIFVCGIPYPSRFDDNTALKMDYLD---KLSNKTYE 764
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQP 704
++ L+ +WY QA RA+NQAVGR IRH DYGAI+ D RF H K +S W+
Sbjct: 765 KSNLA----NEWYTSQAIRAINQAVGRSIRHDRDYGAILLADYRFKHIPVKPNLSKWVLN 820
Query: 705 HIQCYSKFGDVVYTLTRFFR--EERICGSTNL 734
++ Y++ + + +L+ FF ++R C T L
Sbjct: 821 RLKLYTRMDECIESLSSFFEQFDQRPCSPTRL 852
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 146/295 (49%), Gaps = 45/295 (15%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLC---ATLAWRKS 62
I GI+V+FPF Y CQ YME VI++++ NALLESPTGTGKTL LLC ATL W K
Sbjct: 11 IDGIEVKFPFHPYRCQRSYMENVIKTIKESKNALLESPTGTGKTLSLLCSTIATLLWNKM 70
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLP--------------------------- 95
+ + + V S+ G K
Sbjct: 71 VKKVKKTKDDIIKPDATKDVKVKKSEDGTVKSEQLEKESEKRWADFRAVSVLDQRKKVEI 130
Query: 96 -----TILYTSRTHSQLRQVIQELKTSNYRP-------KMVILGSREQLCIHREVSLLRG 143
I+Y+SRTHSQL+QVI E+ S+Y K V+L SR+ LCI+ + G
Sbjct: 131 KPERIKIMYSSRTHSQLKQVIGEVWKSDYYEEFNPKGLKGVLLASRDLLCINPSRGKMTG 190
Query: 144 SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMT 203
N C+ + ++ R+C + + + + +DIE++V G+ CPYF
Sbjct: 191 EVLANFCKQVIQE---RKCEYFNTMRGDKNAKQFQFERLMDIEEMVQTGKDGHFCPYFSV 247
Query: 204 RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
+E Q+ D+V PYNY++ P R + ++ K+SI+I DEAHN E + + ASF +
Sbjct: 248 KEGQEHADLVLLPYNYILSPDIRDAMDIDIKDSIIIIDEAHNAEQVAEEGASFGI 302
>gi|281349618|gb|EFB25202.1| hypothetical protein PANDA_002012 [Ailuropoda melanoleuca]
Length = 897
Score = 205 bits (522), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 172/684 (25%), Positives = 300/684 (43%), Gaps = 90/684 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC-- 150
I Y SRTHSQL Q + E++ S + ++V LGSR+ LCI+ +V L SAQ N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVQRSPFGKDTRLVSLGSRQNLCINEDVKTL-SSAQLINDRCME 287
Query: 151 ---------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-----DIEDLVNIGRTFG 196
R +K RR H + Y HL + + DIE LV +G+
Sbjct: 288 MQRSKHEKNRAEEEKPKRRRQEHRAACPFYSYEQLHLLRDQVLVGVKDIEQLVALGKEAR 347
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
CPY+ +R +V PY L+ R+ G+ + +++ DEAHNL S
Sbjct: 348 ACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGIRLQGQVVLIDEAHNLIDTITSIHSA 407
Query: 257 DLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSK 316
++S L S+ ++ R L N ++ +L LEK + + N K
Sbjct: 408 EVSGAQLCQAHSQLLQYMERYGKR--------LKAKNLMYVKQILYLLEKFVTVLGGNIK 459
Query: 317 ELGFTKP-----------GPYIYELLAD-LNITQETAY--------KLIDIVEVAAELLQ 356
+ T+ +++E D +N+ + Y KL E +L
Sbjct: 460 QNPNTQSLSQTGTELKTINDFLFESQIDNINLFKVRRYWEKSMISRKLFGFTERYGTVLA 519
Query: 357 EDKLQNKKSTTACRIESI------SNILKIIFRDKGTAHSAYYRVHVRE-------ADAN 403
+ Q + + ++S+ + + + + G A +H+ A+ +
Sbjct: 520 ASREQPRLAGFQHFLQSLQPAVTKTPVTPVEEGEAGVPRLASPLMHIESFLAALTTANQD 579
Query: 404 AADVLKGKAS---RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
+L + S +L + NP + + + E ++++ GT+ P+ F ++L
Sbjct: 580 GRVILSRQGSLSQSSLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFREQLLACAG 638
Query: 461 LRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
+ E HVI + I ++ GPS L +Y+ R+ + E G + N+ +
Sbjct: 639 VEAERVVEFSCGHVIPPENILPLVICSGPSSQQLEFTYQKRELPQMMDETGRILCNLCTV 698
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
VP G++ FFPSY Q A W + + R+ KK EP++++ + +Y
Sbjct: 699 VPGGVVCFFPSYEYQRQVYAHWDKSG------LLARLAVRKKIFQEPKRANQVEQVLMEY 752
Query: 575 MAKLK-----DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
+K + +GA+ +V GK+SEG++F+D+ GR VV+ GMP+ + P+++ K
Sbjct: 753 SRCIKCCGQAGGTVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPYPNIKSPELQEKM 812
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
YLD G+ K +AVNQ++GR IRH+ D+ +I+ D+R+
Sbjct: 813 AYLDQTLPRGPGQPPPGK-------ALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRY 865
Query: 690 AHPSRKSQISLWIQPHIQCYSKFG 713
A PS ++ WI+ ++ + FG
Sbjct: 866 ARPSILGKLPAWIRDRVEVKATFG 889
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T ++ GI FPF Y Q +M ++ Q L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQEVGGIHFPFPFTPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|327272138|ref|XP_003220843.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Anolis carolinensis]
Length = 914
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 178/706 (25%), Positives = 310/706 (43%), Gaps = 97/706 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + ++ LGSR+ LC++ EV + G+ Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVQKSPFGKEIRLASLGSRQNLCVNEEVRRM-GAVQLINDRCME 287
Query: 153 LCK---------KGTNRRCNHHSRVADYMKNNPH---LGDEPI----DIEDLVNIGRTFG 196
+ K + T ++ SR + H L DE + DIE LV +G+
Sbjct: 288 MQKNKHEKKSTGEETEKKKTRVSRTVCPFYSYEHMQFLRDEVLVQVKDIEQLVTLGKEMK 347
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
CPY+ +R +V PY L+ R G++ K+ ++I DEAHNL
Sbjct: 348 ACPYYGSRHAIPAAQLVVLPYQMLLHDATRNASGIKLKDQVVIIDEAHNL---------I 398
Query: 257 DLSSGLLTACISEAKNCIDISST-RRGQSSDETLNPDNFAILRALLLKLEKRI----AEV 311
D + + +A +S ++ C S + + + L N ++ +L LE+ + V
Sbjct: 399 DTITCIYSAQVSGSQLCCAHSQLLQYMERYRKRLKAKNLMYIKQILFLLERFVIVLGGNV 458
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL----QNKKSTT 367
N K ++ G + + L + Q L + + L KL + +
Sbjct: 459 NQNPKTQNISEAGVELKSINDFLFLCQIDNINLFKVQHYCEKSLISRKLFGFVERYGAAG 518
Query: 368 ACRIE-------SISNILKIIFRDKGT----------------------AHSAYYRVHVR 398
A +I + N L+ + + +G H + +
Sbjct: 519 AVKIRKADQKMSGLQNFLETLNKRQGEEGIPQDSSEEAEDDQPKMASPLMHIEGFLAALT 578
Query: 399 EADANAADVLKGKASRTLS---WWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL 455
A+ + +L + + LS + NP + + + E ++I+ GT+ P+ F ++L
Sbjct: 579 NANQDGRVILSRQGTLALSSLKFLLLNPAVHFAKVLK-ECRAVIIAGGTMQPIADFREQL 637
Query: 456 KLNFPL---RVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIV 509
+ R+E HVI I I+ GPS L+ +Y R + +E G +
Sbjct: 638 LQSAGASADRIEEFSCGHVIPPDNILPIILCSGPSNQQLDFTYEKRGLPQMMEETGRILC 697
Query: 510 NIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPL 569
N+ IVP G++ FFPSY Q W T G LT ++ KK EP++++
Sbjct: 698 NLCNIVPGGMVCFFPSYEYEKQVYMHWGKT--GLLT----QLAAKKKIFQEPKRANQVEQ 751
Query: 570 AIEDYMAKLKDTS-----TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+ +Y +K + +GA+ F+V GK+SEG++F+D GR V++ GMP+ + P+
Sbjct: 752 VLAEYAKCIKRCNQTGGPMTGALLFSVVGGKMSEGINFSDDLGRCVIMVGMPYPNIKSPE 811
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
++ K YL+ G+ G + +AVNQ++GR IRH+ D+ +I+
Sbjct: 812 LQEKIAYLNKTMPKAAGQ--------APGRMLIDNLCMKAVNQSIGRAIRHQKDFASIVL 863
Query: 685 CDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICG 730
D R++ P+ +++ WI+ Q + FG L +F E++ G
Sbjct: 864 LDHRYSRPAIFNKLPQWIKSQTQVKAGFGPAFAALRKFHWEKKSNG 909
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 16/127 (12%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFST 68
++ FP+ Y Q +M K+ Q L+ + ESPTGTGK+L L+C L W + +
Sbjct: 11 MNFPFPYAPYPIQEEFMAKLYQVLETGKIGIFESPTGTGKSLSLICGALTWLRDFEEKTK 70
Query: 69 ------LGSQVNNQISGSQ-------SSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK 115
L ++N + + Q S+ N +G+ T + R+ Q LK
Sbjct: 71 QEEAQLLAGEINGKDTNKQLEKGITESATNQVSTGEPDWITQFVQKKEE---REATQRLK 127
Query: 116 TSNYRPK 122
R K
Sbjct: 128 EEQIRKK 134
>gi|340931927|gb|EGS19460.1| hypothetical protein CTHT_0049210 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 918
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 200/727 (27%), Positives = 324/727 (44%), Gaps = 131/727 (18%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--------------------RP-KMVILGSREQLCIH 135
I YTSRTHSQ+ Q I EL+ + P K V L SR++LCI+
Sbjct: 220 IYYTSRTHSQIAQFIGELRRPAFPTSIPEDMLSTDNLGKGPPTEPVKQVPLSSRQKLCIN 279
Query: 136 REVSLLRG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVN 190
V+ L SA N+ C L + + +C AD +K D + DIEDL
Sbjct: 280 PSVARLNSLSAINDRCTELQQGKSGHKCPFIPN-ADNLKQVHEFRDTVLASLPDIEDLYR 338
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ +RE ++V PY L+ R+ LG++ + +I+I DEAHN+
Sbjct: 339 VGKDLQVCPYYASREAIPGAEVVTLPYPLLLQKSAREALGIKLEGNIVIIDEAHNIMDAI 398
Query: 251 AD--AASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI 308
A+ AA LS + A+ + + R G+ L +N ++ A + ++ + +
Sbjct: 399 ANVHAAEIRLSE------LRRAREMLGVYVKRFGKK----LKGEN-RMMVAQVGRVVESL 447
Query: 309 AE---VPINSK-ELGFTKPGPYIYELLAD-LNITQETAY----KLIDIVE--VAAELLQE 357
+E +N K + G + AD +N+ Q Y KL VE V+ + +E
Sbjct: 448 SEWLNTALNGKGDHGIVDSNSLLKARGADQINLYQLIKYIQDSKLAYKVESYVSHKEEEE 507
Query: 358 DKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
+ Q K STT + ++ + L + T S R+ + +D+ LS
Sbjct: 508 AQGQGKTSTTTPVLHTLVSFLSAL-----TNLSTEGRIFYEKLLTTPSDI-------KLS 555
Query: 418 WWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLRVENP-------HV 468
+ +P FS + ++IL GT+SP D + L FP+ E+ HV
Sbjct: 556 YLLLSP---THAFSSIVSAARAVILAGGTMSPFDDYKAHL---FPMLSEDKITTLSCGHV 609
Query: 469 ITSKQ--IW--AGIVPVGPSGYLLNS-----SYRNRDSIEYKQELGNTIVNIARIVPDGL 519
I S +W A P G G S S++ R ++LG ++NI +VPDG+
Sbjct: 610 IPSSNLFVWTLASTRP-GQQGSAAASDAFEFSFQKRSDPAMIRQLGLVLLNICSVVPDGV 668
Query: 520 LIFFPSYYLMDQCIACWK--------NTSHGNLTTIWERICKHKKPVVEPRQSS------ 565
++FFPSY +D+ +A W+ + S T+W+R+ K E + S
Sbjct: 669 VVFFPSYSYLDEVVAAWQAPETQNGPSVSFQRKQTLWDRLAAKKTLFRESKGGSSDEILQ 728
Query: 566 -----LFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
+F +L T GA+ +V GK+SEG++F+D GR VV+ G+P+ +
Sbjct: 729 QYSDAIFSAGTASRQ-QLDPTGRGGALLLSVVGGKLSEGINFSDRLGRCVVVVGLPYPNI 787
Query: 621 TDPKVRLKREYLDLQAQSQ---------GGEYKETKLSFLSGE-----------DWYNQQ 660
P+ + + EY++ A ++ GE +T+ L+ E D+Y
Sbjct: 788 NSPEWKARIEYVETAAIARLTSSKTSRFEGEGDKTQSRALTREEALPLARQVARDFYENA 847
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK---FGDVVY 717
RAVNQ++GR IRHR DY A++ D RF + ++ WI+ + S+ ++
Sbjct: 848 CMRAVNQSIGRAIRHRGDYAAVVLIDRRFGTDRIRGKLPGWIRQGMVEGSENKGLAGLMS 907
Query: 718 TLTRFFR 724
L FFR
Sbjct: 908 GLGSFFR 914
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCN--ALLESPTGTGKTLCLLCATLAW 59
I+ P+ YD QL +M V L+ +LESPTGTGK+L L+C+ L W
Sbjct: 19 INFHHPYTPYDVQLQFMRTVYNILEKGGGQVGILESPTGTGKSLSLICSALTW 71
>gi|5044|emb|CAA45870.1| rhp3+ [Schizosaccharomyces pombe]
Length = 772
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 191/753 (25%), Positives = 328/753 (43%), Gaps = 105/753 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP+ Y Q YM + SL ALLE P+GTGKT+ LL +++++
Sbjct: 3 FYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------T 116
L +Y SRT S++ + + ELK T
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIDKALAELKRLMAYRT 94
Query: 117 SN--YRPKMVILG--SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
S Y + LG SR+ LC+H V + G+ + CR L + C
Sbjct: 95 SQLGYEEPFLGLGLTSRKNLCLHPSVRREKNGNVVDARCRSLTAGFVREQRLAGMDVPTC 154
Query: 163 NHHSRVADYMKNNPH--LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
H + D PH + + ++D+ G CPYF R + +++ Y+YL
Sbjct: 155 EFHDNLEDL---EPHSLISNGVWTLDDITEYGEKTTRCPYFTVRRMLPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + + E K+ I++FDEAHN++ +C ++ S DL+ L S++ ++
Sbjct: 212 LDPKIAERVSRELNKDCIVVFDEAHNIDNVCIESLSIDLTESSLRKA-SKSILSLEQKVN 270
Query: 280 RRGQSSDETLNPDNFAILRAL----LLKLEKRIAEVPINSKEL------GFTKPGPYIYE 329
QS + L + ++R L E + P+ +++ G + +
Sbjct: 271 EVKQSDSKKLQDEYQKLVRGLQDANAANDEDQFMANPVLPEDVLKEAVPGNIRRAEHFIA 330
Query: 330 LLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKIIFR 383
L +T K++ ++ E LQ K +KK C R+ S+ L+I
Sbjct: 331 FLKRFVEYLKTRMKVLHVIAETPTSFLQHVKDITFIDKKPLRFCAERLTSLVRALQISLV 390
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT---------LSWWCFNPGIAMQE-FSRL 433
+ + A +L + T L + C + IA++ F R
Sbjct: 391 EDFHSLQQVVAFATLVATYERGFILILEPFETENATVPNPILRFSCLDASIAIKPVFERF 450
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
S+I+TSGTLSP+D + + L+ N ++ + +V G ++S +
Sbjct: 451 R--SVIITSGTLSPLDMYPKMLQFNTVMQESYGMSLARNCFLPMVVTRGSDQVAISSKFE 508
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + GN +V ++I PDGL+ FFPSY ++ ++ W+ S G L +W K
Sbjct: 509 ARNDPSVVRNYGNILVEFSKITPDGLVAFFPSYLYLESIVSSWQ--SMGILDEVW----K 562
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +VE LA+E Y A ++ GAV +V RGKVSEG+DF H GRAV++
Sbjct: 563 YKLILVETPDPHETTLALETYRAAC--SNGRGAVLLSVARGKVSEGVDFDHHYGRAVIMF 620
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + E+L Q + ++ L+F A R Q +GRV+
Sbjct: 621 GIPYQYTESRVLKARLEFLRDTYQIREADF----LTF---------DAMRHAAQCLGRVL 667
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + D+G ++ D+R+ +++++ WIQ +I
Sbjct: 668 RGKDDHGIMVLADKRYGRSDKRTKLPKWIQQYI 700
>gi|19113937|ref|NP_593025.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe 972h-]
gi|1709995|sp|P26659.2|RAD15_SCHPO RecName: Full=DNA repair helicase rad15; AltName: Full=Protein
rhp3; AltName: Full=RAD3 homolog
gi|1177345|emb|CAA93221.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe]
Length = 772
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 191/753 (25%), Positives = 328/753 (43%), Gaps = 105/753 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP+ Y Q YM + SL ALLE P+GTGKT+ LL +++++
Sbjct: 3 FYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------T 116
L +Y SRT S++ + + ELK T
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIDKALAELKRLMAYRT 94
Query: 117 SN--YRPKMVILG--SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
S Y + LG SR+ LC+H V + G+ + CR L + C
Sbjct: 95 SQLGYEEPFLGLGLTSRKNLCLHPSVRREKNGNVVDARCRSLTAGFVREQRLAGMDVPTC 154
Query: 163 NHHSRVADYMKNNPH--LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
H + D PH + + ++D+ G CPYF R + +++ Y+YL
Sbjct: 155 EFHDNLEDL---EPHSLISNGVWTLDDITEYGEKTTRCPYFTVRRMLPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + + E K+ I++FDEAHN++ +C ++ S DL+ L S++ ++
Sbjct: 212 LDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTESSLRKA-SKSILSLEQKVN 270
Query: 280 RRGQSSDETLNPDNFAILRAL----LLKLEKRIAEVPINSKEL------GFTKPGPYIYE 329
QS + L + ++R L E + P+ +++ G + +
Sbjct: 271 EVKQSDSKKLQDEYQKLVRGLQDANAANDEDQFMANPVLPEDVLKEAVPGNIRRAEHFIA 330
Query: 330 LLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKIIFR 383
L +T K++ ++ E LQ K +KK C R+ S+ L+I
Sbjct: 331 FLKRFVEYLKTRMKVLHVIAETPTSFLQHVKDITFIDKKPLRFCAERLTSLVRALQISLV 390
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT---------LSWWCFNPGIAMQE-FSRL 433
+ + A +L + T L + C + IA++ F R
Sbjct: 391 EDFHSLQQVVAFATLVATYERGFILILEPFETENATVPNPILRFSCLDASIAIKPVFERF 450
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
S+I+TSGTLSP+D + + L+ N ++ + +V G ++S +
Sbjct: 451 R--SVIITSGTLSPLDMYPKMLQFNTVMQESYGMSLARNCFLPMVVTRGSDQVAISSKFE 508
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + GN +V ++I PDGL+ FFPSY ++ ++ W+ S G L +W K
Sbjct: 509 ARNDPSVVRNYGNILVEFSKITPDGLVAFFPSYLYLESIVSSWQ--SMGILDEVW----K 562
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+K +VE LA+E Y A ++ GAV +V RGKVSEG+DF H GRAV++
Sbjct: 563 YKLILVETPDPHETTLALETYRAAC--SNGRGAVLLSVARGKVSEGVDFDHHYGRAVIMF 620
Query: 614 GMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVI 673
G+P+ ++ + E+L Q + ++ L+F A R Q +GRV+
Sbjct: 621 GIPYQYTESRVLKARLEFLRDTYQIREADF----LTF---------DAMRHAAQCLGRVL 667
Query: 674 RHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
R + D+G ++ D+R+ +++++ WIQ +I
Sbjct: 668 RGKDDHGIMVLADKRYGRSDKRTKLPKWIQQYI 700
>gi|340721189|ref|XP_003399007.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX11-like [Bombus terrestris]
Length = 857
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 170/693 (24%), Positives = 307/693 (44%), Gaps = 95/693 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I + SRTHSQL Q I EL+ S Y + + L SR+ CI++ V L+ + N C L
Sbjct: 194 IFFCSRTHSQLSQFIGELRKSPYSKNVSVITLTSRQNYCINKNVKKLKHLNLINECCLQL 253
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHL-GDEPI----------DIEDLVNIGRTFGPCPYFM 202
+K + + + P + G++ + DIE++V G C Y+
Sbjct: 254 QRKKATAKDEKDLKRKKMTSSCPFVPGNQDLLIRESLMQIQDIEEIVQKGENLKTCAYYA 313
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
+R+ ++ PYN ++ R G+ K +ILI DEAHNL + S ++
Sbjct: 314 SRKAVSYGQLILVPYNTILHKNTRISSGINLKGNILIIDEAHNLLEAIENMHSVIITGRN 373
Query: 263 LTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI----AEVPINSKEL 318
L C S+ +R Q+ + N L L L K I A + N ++
Sbjct: 374 LLHCYSQLS-----QYQKRFQT---LFSAKNILSLTQLSFCLRKLITVLGATIKSNPDDV 425
Query: 319 GFTKPGPYIY---ELLADLNITQETAYKLIDIVE-------VAAELLQED---KLQNKKS 365
+ P +Y E NI ++L+ ++ + + Q D K+ N +
Sbjct: 426 INIEASPKLYKIEEFAIMTNIDTVNMFELLKFIKNSRLNHKLQGFIEQYDTNLKIHNY-N 484
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANA--------ADVLKGKAS---- 413
T C ++ N +K K + + + E +N + L+ S
Sbjct: 485 TKTCGVKQFLNSIK----TKSSEFDTITDIQLDEDRSNNPMMTIISFLECLRSNCSDGRI 540
Query: 414 ----------RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
+ + NP + R + ++IL GT++PM+ F +L +
Sbjct: 541 FIIPGPTVGQSIIKFLLLNPAAHFHDIIR-DARAVILAGGTMAPMNEFIDQLFIAAGASS 599
Query: 464 EN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD 517
E HVI + I I GP+G +++NR++ + ELG T++N+ I+P
Sbjct: 600 ERIVTYSCDHVIPEENIVCSITTHGPTGIEFEFNFQNRENTKLLDELGRTLLNLCNIIPA 659
Query: 518 GLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAK 577
G+++F PSY + +N+ I ++ K + EP+ +S +++Y
Sbjct: 660 GIIVFLPSYNFEELMYKHLENSG------IIRKLSLKKHILREPKSASQVHEILKEYSLH 713
Query: 578 LKD--TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
+K S +G++ F+V GK+SEGL+F+D GR V++ GMP+ + +++ K +YL+
Sbjct: 714 IKSPKNSQNGSLLFSVVGGKLSEGLNFSDDLGRCVIVVGMPYPNIQSLELQEKMKYLNEN 773
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
+S +G+++Y +AVNQ +GR IRH +DY +I D+R+++ +
Sbjct: 774 IKSD------------AGQNFYENSCMKAVNQCIGRAIRHINDYSTVILLDKRYSYKIKA 821
Query: 696 SQISLWIQPHIQCYSKFGDVVYTLTRFFREERI 728
+ WIQ + + FG + +++FF ++++
Sbjct: 822 --LPQWIQRTLIIHKSFGSTIGAISKFFNKKKL 852
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 18 YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
Y Q +M+++ + L+N + ESPTGTGK++ ++C L W
Sbjct: 14 YPIQTQFMKELYKCLENSKLGIFESPTGTGKSMSIICGALKW 55
>gi|76155593|gb|AAX26884.2| SJCHGC09335 protein [Schistosoma japonicum]
Length = 412
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 213/412 (51%), Gaps = 71/412 (17%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW- 59
MP I G++++FP++ YDCQL YM KV+ SL +A+LESPTGTGKTLCLLCA+LAW
Sbjct: 1 MPRIVIDGVEIDFPYQPYDCQLEYMTKVLLSLNQGKHAILESPTGTGKTLCLLCASLAWL 60
Query: 60 -----------------RKSLGSFST---LGSQVNNQISGSQSSVNSSQSGDSKLPTILY 99
+ LG+ T +G+ +N++ N ++ ++ I++
Sbjct: 61 DKQIRPAELISTIDTKHQSGLGNCLTCDDIGNHDDNKLFRQIHFTNLNKVNNA--CKIIF 118
Query: 100 TSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREV-SLLRGSAQNNACRFLCKKG 157
SRTHSQL Q I LK + Y + + ++GSR+QLC+ EV SL SA+ ACR K+
Sbjct: 119 ASRTHSQLAQAINALKGTVYSKSNISVVGSRDQLCLLTEVMSLDSNSAKIYACRMRVKR- 177
Query: 158 TNRRCNHH--SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFA 215
+R N S + + N L + +DIEDL N G+ CPYF++REL+ ++F
Sbjct: 178 --KRVNISGISTLNAMILANLKL-EGIVDIEDLSNFGQKTRCCPYFISRELKTDSRLIFM 234
Query: 216 PYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID 275
PYNYL+D R + +N+ +IFDEAHN+E +C DA+S LSS LL + I + +
Sbjct: 235 PYNYLLDSRIRTLYNINLENTAVIFDEAHNIEQVCEDASSVTLSSALLASAIEHVRCVCE 294
Query: 276 I--------------------------------------SSTRRGQSSDETLNPDNFAIL 297
+ T+ +S+ E+L+ + L
Sbjct: 295 VIFNHNIESIETETGDNNHVNSNNNKRKPTVIMNKKELFDMTQPEESAIESLSIEKMITL 354
Query: 298 RALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVE 349
+ L++LE+ I E+ + S+ G TK G +I++LL I T + I++
Sbjct: 355 KGQLIELERLIDELSVPSE--GLTKDGSFIFDLLGRAGINHWTNNAIQTIID 404
>gi|328871465|gb|EGG19835.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 1125
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 177/316 (56%), Gaps = 22/316 (6%)
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE--NPHVITSKQIWA 476
WC NP A + R + +IILTSGTL+P++SFA EL FP+ E N IT K++W
Sbjct: 648 WCMNPRSAFKSI-REKARTIILTSGTLAPLNSFASELSSPFPVTAELGNLGDIT-KRVWI 705
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
G + VG + ++ +++ ++++++ LG+ I+ ++VP+G+L+FFPSY M++ W
Sbjct: 706 GTLGVGTNNTKMDCTFKGSENLQFQDALGDAILKHLQVVPNGVLVFFPSYAFMEKIKNRW 765
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKV 596
+ +T ++ +I + K EP+Q+ F +E Y D +GA F+VCRGKV
Sbjct: 766 E------MTGMYNKIDQCKPIFFEPKQTKDFKRVLEGY----NDAVKTGATLFSVCRGKV 815
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDW 656
SEG++F+D R V+I G+P + D +V LK++Y D + ++G +W
Sbjct: 816 SEGINFSDEYARGVIIVGIPLPNIKDLRVDLKKKYNDSNCS--------IIQNLINGNEW 867
Query: 657 YNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVV 716
Y Q RA+NQA+GR IRH+ DYG+I+ D RF S +S W + I+ + +
Sbjct: 868 YTLQGYRALNQAIGRCIRHKDDYGSILLIDSRFTQESVWRNLSRWARMCIKNNNSIDRSL 927
Query: 717 YTLTRFFREERICGST 732
+L FF ++ T
Sbjct: 928 PSLKSFFDSRKLLEQT 943
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 102/186 (54%), Gaps = 10/186 (5%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFL 153
+P I + SRTHSQ+ Q+ EL + YRP+M +L SR+ CI+ +++ + + CR +
Sbjct: 301 VPKIFFCSRTHSQIAQLTSELLKTPYRPRMCVLASRDHYCINPKLAGY--DRKKDKCRKV 358
Query: 154 CKKGTNRRCNHHSRVADYM-----KNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQK 208
K+ R C R Y K P E IED ++ G+ G CPY+ ++ +
Sbjct: 359 RKE---RNCRFERRTKQYSLSQIPKFLPGGEKEVWSIEDFIDGGKDLGECPYYASKGFIE 415
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
+++F PYNY+I+P RK + NSI+IFDEAHN+E AASF+L+ + +
Sbjct: 416 HANLIFCPYNYIIEPSIRKIFKEHFDNSIIIFDEAHNIEDSLMSAASFELTKEEVNESTT 475
Query: 269 EAKNCI 274
+ K+ +
Sbjct: 476 QCKDTM 481
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
TYKI G +++FP+E YD Q M +++++ + NALLES TGTGKTL LLCATL W+K
Sbjct: 109 TYKINGHNIKFPYEPYDTQATMMHRILEACEKGQNALLESATGTGKTLSLLCATLEWQK- 167
Query: 63 LGSFSTLGSQVN 74
G + S +N
Sbjct: 168 -GKLAERDSNIN 178
>gi|448514499|ref|XP_003867130.1| Chl1 protein [Candida orthopsilosis Co 90-125]
gi|380351468|emb|CCG21692.1| Chl1 protein [Candida orthopsilosis Co 90-125]
Length = 808
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 168/635 (26%), Positives = 288/635 (45%), Gaps = 73/635 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRGSAQN 147
I ++SRTHSQL Q +L+ + + R K + +GSR+QLC++ +VS L + N
Sbjct: 199 IFFSSRTHSQLNQFSSQLRLTTFDASFDDMTERTKYLPVGSRKQLCVNEKVSKLGNQSIN 258
Query: 148 NACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTREL 206
+AC L K T C + ++ +K L I DIEDL +G CPY+ R+
Sbjct: 259 DACIDLQK--TKEGCTYLTKDQSLIKEFSDLSLSRIRDIEDLATLGTELHACPYYSVRKG 316
Query: 207 QKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ ++V PY L R+ G+ K++I+I DEAHN+ D+ + S + +
Sbjct: 317 LDSAEVVSLPYQLLFQKSAREAWGLNIKDAIVIIDEAHNI----IDSITSLYSVKITVSQ 372
Query: 267 ISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPY 326
+ + + I T+ + LN N R ++KL K I +V E PG
Sbjct: 373 LHKVMQSLKIYLTKFAKK----LNSGN----RINIVKLTK-ICKVLTKFMESQSASPGKE 423
Query: 327 IYELLADLNITQETAYKLIDI-VEVAAELLQEDKLQN--KKSTTACRIESI--------S 375
+ K+ DI ++ +L+ KL KS A +IES +
Sbjct: 424 V---------------KVEDIFLDSTGDLVNIHKLDEYLTKSKIAYKIESYMEKNEEPHA 468
Query: 376 NILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEV 435
L ++F + + R K L + +P + E E
Sbjct: 469 ASLPVLFEI-----AKFLRALTNPRKEGKFYWDKSANEFELRYMLLDPSVIFYEIVT-EA 522
Query: 436 GSIILTSGTLSPMDSFAQELKLNFP----LRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
++L GT+ PM F + L P R H+I + + V G + S
Sbjct: 523 RCVLLCGGTMEPMSDFTKFLMPQIPDHQIKRFSCQHIIPENNL--KVFTVDKWGSEFDFS 580
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
Y RD + LG I+ + ++VP G+++FF SY + + + W+ T+ +++I
Sbjct: 581 YNRRDDMLQMDRLGQFILQVCQVVPRGVVVFFGSYSFLYKIVQHWQQTN------TYQKI 634
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
K EP SS + +Y + + ++ GA+ F+V GK+SEG++F+D+ RAVV
Sbjct: 635 SALKAVFQEPTNSSNVDSVLFEY-SNVINSQKKGAILFSVVGGKLSEGINFSDNLARAVV 693
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
+ G+P+ ++ KR +++ Q +GG + K S ++Y +A+NQ++GR
Sbjct: 694 MVGLPYPNAFSGEIVAKRTFIESQVIEKGGSAQRAK---ESSSEYYENLCMKAINQSIGR 750
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
IRH +DY I D+R+ P ++++S W++ +
Sbjct: 751 CIRHANDYALIYLVDKRYKQPRVQNKLSKWVKDRL 785
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAW 59
PF YD Q+ M+ + +++N L ESPTGTGKTL ++C+T+ W
Sbjct: 26 PFTPYDIQVQLMDAIYDTIENGYKVGLFESPTGTGKTLSIICSTMTW 72
>gi|330947928|ref|XP_003307004.1| hypothetical protein PTT_20325 [Pyrenophora teres f. teres 0-1]
gi|311315183|gb|EFQ84891.1| hypothetical protein PTT_20325 [Pyrenophora teres f. teres 0-1]
Length = 796
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 187/748 (25%), Positives = 327/748 (43%), Gaps = 103/748 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FYIDNLPVLFPYPRVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK YR
Sbjct: 63 YPEKRKL----------------------------IYCSRTMSEIEKALAELKALMKYRT 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + G+ + CR L + C
Sbjct: 95 TELGYEEDFRGLGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEKKERGEPVELC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + + ++ G CPYF R + +++ Y+YL+D
Sbjct: 155 VYHENL-DLLEPHNLIPPGVWTFDGMLKYGEQQKQCPYFTARRMMPHCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + E K+ I++FDEAHN++ +C ++ S DL+ +L ++ N +D T
Sbjct: 214 PKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKA-TKGVNNLDRKITEM 272
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL----------GFTKPGPYIYELL 331
S E L + ++ L E R + + + L G + + L
Sbjct: 273 KSSDAEKLQNEYAKLVEGLRAADEARNEDAFMANPALPDDLLTEAVPGNIRRAEHFVAFL 332
Query: 332 ADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI--IFR 383
+T K++++V + E L+ + +K C R+ S+ L++ I
Sbjct: 333 KRFIEYLKTRMKVLNVVADTPPEFLKHLRDLTFIERKPLRFCAERLTSLVRTLELTNIED 392
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEV 435
+ A + V + +++ S T L C + IA++ F R
Sbjct: 393 YQPLQEVATFATLVATYETGFLLIIEPFESATATVPNPVLHLTCLDAAIAIKPVFERFY- 451
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+I+TSGT+SP+D + + L N ++ +T K IV G + S + +R
Sbjct: 452 -SVIVTSGTMSPLDMYPRMLNFNTVVQESFTMTLTRKSFLPMIVDRGNDQNQVTSQFEHR 510
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ ++ ++ GN ++ ++ PDG+++FFPSY M+ I+ W+ L T+W K+K
Sbjct: 511 NDLQVQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESIISAWQGME--ILDTVW----KYK 564
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+VE + LA+E + + GAV V RGKVSEG+DF H GR V+ G+
Sbjct: 565 LILVETPDAQETALALETFRTACNN--GRGAVLLCVARGKVSEGIDFDHHYGRTVICMGV 622
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ ++ + E+L Y+ + FLS + A R Q +GRVIR
Sbjct: 623 PYQYTESRILKARLEFLR-------ETYRIKEADFLSFD------AMRHAAQCLGRVIRG 669
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+ DYG ++ D+RF +++Q+ WIQ
Sbjct: 670 KDDYGIMVLADKRFN--KKQTQLPKWIQ 695
>gi|396466748|ref|XP_003837763.1| similar to ATP-dependent RNA helicase chl1 [Leptosphaeria maculans
JN3]
gi|312214326|emb|CBX94319.1| similar to ATP-dependent RNA helicase chl1 [Leptosphaeria maculans
JN3]
Length = 861
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 178/690 (25%), Positives = 297/690 (43%), Gaps = 92/690 (13%)
Query: 97 ILYTSRTHSQLRQVIQEL-------------------KTSNYRPKMVILGSREQLCIHRE 137
I + SRTHSQL Q EL T+N K + LGSR+ LCI+ +
Sbjct: 203 IFFCSRTHSQLTQFSSELGRVKMPPALLAENVDNENSDTTNEDVKHLTLGSRKNLCINSK 262
Query: 138 VSLL-RGSAQNNACRFLCKKGT-NRRCNHH---------SRVADYMKNNPHLGDEPIDIE 186
V L +A N C L +K + + RC + DY DIE
Sbjct: 263 VKALGNATAINERCVELQQKTSADCRCQFMPTKESETLLTEFRDYALARIR------DIE 316
Query: 187 DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
DL ++G+ G CPY+ +R + K ++V PY L+ R+ LG+ K ++I DEAHNL
Sbjct: 317 DLGSLGKQLGICPYYASRPVTKYCEMVTLPYPLLLQRAAREALGLSLKGHVVIIDEAHNL 376
Query: 247 EGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK 306
DA S S + + +A+ + T Q L N + +L L+
Sbjct: 377 ----MDAISGIYSVSVTLDQVQQARAQL----TTYLQKFRNKLKGKNRMYVAQILRVLDS 428
Query: 307 RIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKST 366
I + ++ + +L+ + Q YKL LQE +L K
Sbjct: 429 IITYLQSVGRDDKTADGQADMVSILSGKGVDQINIYKL-------NTYLQESRLARKVDG 481
Query: 367 TACRIESISNILKIIFRDKGTAHSAYYRVHVR---------EADANAADVLKGKASRTLS 417
IE + + ++ +HV+ A+ + TL
Sbjct: 482 YTAFIEQSNKDGGKVSAERKPRQQIPVLMHVQTFLLSLMNPSAEGRFFWSKEESTGTTLR 541
Query: 418 WWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP-------LRVENPHVIT 470
+ +P ++ E +++L GT+SPM + L P + + HVI
Sbjct: 542 YMLLDPTYHFRDIIE-EARAVVLAGGTMSPMSDYENHL---LPYLDHSQIMTLSCGHVIP 597
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
++A V PSG + ++ NR+ +LG +I+ A+ +PDG++IFFPSY +
Sbjct: 598 PSNLFAAPVIQAPSGAAFDFTFENRNKETTLVDLGYSILAFAQHIPDGVVIFFPSYSYLH 657
Query: 531 QCIACWKNTSHGN-LTTIWERICKHKKPVVE-------------PRQSSLFPLAIEDYMA 576
C+ WK S + +W++I + K +E P+ +++ + + Y A
Sbjct: 658 TCVTGWKRISTTDSQQKLWQKIEQAKPIFLEQQSQQSRSTQSLVPKDAAIDSV-LTAYSA 716
Query: 577 KLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
+ + GA+ FAV G +SEG++F+D GR VV+ G+PF + + K +Y+ +
Sbjct: 717 AVASGNGRGALLFAVIGGSLSEGINFSDSLGRGVVVVGLPFPNPHSAEWKAKMQYISAKE 776
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
++GG+ + ++ ++Y RAVNQ +GR IRH+ DY AI+ D R+ +
Sbjct: 777 SARGGDGR------VAAREFYENACMRAVNQCIGRAIRHKGDYAAILMLDRRYGSKRIQD 830
Query: 697 QISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
++ WI+ + D+ L FF E+
Sbjct: 831 KLPKWIRGSMASGLGAKDIGGKLDNFFAEK 860
Score = 47.0 bits (110), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
P+ Y+ Q +M V L++ + ESPTGTGK+L L+C +L W
Sbjct: 13 PYTPYEIQNDFMHAVYNCLESGKVGIFESPTGTGKSLSLICGSLTW 58
>gi|307202440|gb|EFN81860.1| Fanconi anemia group J protein [Harpegnathos saltator]
Length = 293
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 171/299 (57%), Gaps = 24/299 (8%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
TL C NP + + SR+ S+IL SGTL+P SF EL FP ++ H+I +Q+
Sbjct: 1 TLKLVCMNPAVVFEPLSRI-TRSVILASGTLAPTSSFESELGTRFPHKLHANHIIPREQV 59
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+ +P GP+G L ++Y+N +S ++ ELG IV + +P G+L FF SY M++
Sbjct: 60 YVRCIPRGPNGESLLANYKNVNSWSFQDELGKLIVQVCDAIPYGVLCFFSSYSAMNKIHM 119
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST------SGAVF 588
WK+ IW ++ + K+ VEP+++ P + +Y +K++S+ SGA+
Sbjct: 120 RWKDIG------IWAKLAELKEIFVEPKENRELPEIMREYREVIKESSSKSFRERSGAIL 173
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKL 648
FAV RGKV+EG+DF+D+ R V+ G+PF ++ + V +K++Y D S+G
Sbjct: 174 FAVFRGKVAEGIDFSDNEARCVLTVGIPFTSIKNVAVAMKKDYND-SNMSKG-------- 224
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAH-PSRKSQISLWIQPHI 706
LSG +WY A RA+NQA+GR IRH +D+GA++ DERF P + WI+ +
Sbjct: 225 -LLSGSEWYTINAFRALNQALGRCIRHINDWGAVLLVDERFLQRPKNADYLPKWIKEMV 282
>gi|320165278|gb|EFW42177.1| DNA repair helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1329
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 180/340 (52%), Gaps = 32/340 (9%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
L WC N + +F R V S+ILTSGTLSPM+SFA EL FP+ +E HVI +
Sbjct: 835 LEIWCLNSALCFSDF-REGVRSVILTSGTLSPMNSFASELGTAFPVVLEGAHVIPPDHTF 893
Query: 476 AGIVPVGPSGYLLNSSYR----NRDSIEYKQELGNTIVNIARIVP--DGLLIFFPSYYLM 529
+ GPS L ++Y S + ++G+ I +A VP G L+FF SY +M
Sbjct: 894 VRCLSRGPSTNALRATYSVLSDYTSSTIFFDDVGSIISQVAHTVPRGTGTLVFFASYSMM 953
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL-------FPLAIEDYMAKLKDTS 582
D+ W + N + ++ V EPR++ + F L I
Sbjct: 954 DKAATRWSQSGFLNELRLTHQV------VFEPREAKMLEETMRMFNLGIYTSPPPAHPQL 1007
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGE 642
G+V FAVCRGKVSEG+DFAD+ RAV+ G+PF + ++ +KR Y DL A
Sbjct: 1008 PRGSVMFAVCRGKVSEGIDFADNQARAVLAVGIPFPNLGTDQIVIKRSYNDLHA------ 1061
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
++ L+G WY+ QA RA+NQA+GR IRHR+D+GAI+ DERF H + + +S W+
Sbjct: 1062 ---SERDLLTGSQWYDIQAYRALNQALGRCIRHRNDWGAILLLDERFRHANAINSLSRWV 1118
Query: 703 QPHIQCYSKFGDVVYTLTRFFREERI--CGSTNLKLIKTE 740
+ +Q ++ +++ L R F R+ C L+ KTE
Sbjct: 1119 RQRLQHNTELPELLTHL-RSFVATRVAMCQVALLQKRKTE 1157
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 12/189 (6%)
Query: 88 QSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK------MVILGSREQLCIHREVSLL 141
++ LP I +T+RTH Q+ Q+++EL+ +Y M IL SR + C+H L
Sbjct: 417 RTAPDDLPIIYFTTRTHKQIAQIVRELRRISYLTDSDSPDLMTILASRSKTCVHP----L 472
Query: 142 RGSAQNNACRFLCKKGTN-RRCNHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCP 199
S + + R C + RRC+H + + + + + +IEDL++ G CP
Sbjct: 473 VNSGKPDEIRDRCNEAVQARRCSHREKTTTMVDSFRRKSEYIVWEIEDLISFSDKSGGCP 532
Query: 200 YFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
YF TRE+ +IV PYNY++DP RK + ++ N+I+I DEAHN+E +C D+ S +S
Sbjct: 533 YFATREMAGFANIVLCPYNYVLDPVIRKNMEIDLSNNIVIVDEAHNIEDVCRDSLSMCVS 592
Query: 260 SGLLTACIS 268
L +S
Sbjct: 593 KSRLDYLVS 601
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 45/57 (78%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
I G+ V FPF Y QL M+KVIQ+L++K NALLESPTGTGK+L LLC+ LAWR+S
Sbjct: 107 IGGVSVRFPFPPYPTQLTMMQKVIQALESKQNALLESPTGTGKSLTLLCSALAWRRS 163
>gi|312370938|gb|EFR19235.1| hypothetical protein AND_22844 [Anopheles darlingi]
Length = 807
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 210/775 (27%), Positives = 335/775 (43%), Gaps = 128/775 (16%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ ++ K + LLE P+GTGKT LL T+A+
Sbjct: 3 VDGLLVYFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLTVAYILE-- 60
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRPKM 123
N I + ++Y SRT ++ +VI ELK NY K
Sbjct: 61 ---------NPHI----------------VRKLIYCSRTVPEIEKVIAELKHLMNYYEKQ 95
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADY 171
++L SR+ +CIH EVS R G + C + R H + V Y
Sbjct: 96 TGTMPNITGLVLSSRKNMCIHPEVSREREGKIVDARCYGMTASYVRERAAHDETAPVCQY 155
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E + I+DL GR CPYF++R +V Y YL+DP
Sbjct: 156 YEGFQAEGKESMLPPGVYSIDDLKEFGRERNWCPYFLSRFAINQAHVVVYSYYYLLDPKV 215
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGL----------LTACISEAKNC- 273
+ + E + S+++ DEAHN++ +C D+ S ++ L L ISE K
Sbjct: 216 AEVVSKELTRESVVVCDEAHNIDNVCVDSMSVKINKRLIERSTTGIHNLEQKISELKEDD 275
Query: 274 ---IDISSTRRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG- 324
++ TR Q D + + ++ +L E VP N + L F K
Sbjct: 276 KRRLNDEYTRLVQGLKDASFARETDMVVANPVLPNEILREVVPGNIRNADHFLSFLKRFI 335
Query: 325 PYIYELLADLNITQET-AYKLIDI-----VEVAAELLQEDKLQNKKSTTACRIESISNIL 378
YI L ++ QE+ A L D+ +E D+LQ+ T S L
Sbjct: 336 EYIKSRLRVQHVVQESPAGFLRDVQRQVCIERKPLRFCADRLQSLLRTLEITDLSEYGPL 395
Query: 379 KII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEV 435
+I F + ++ + + + D V + L + C + IAM+ F R +
Sbjct: 396 SVITSFATLVSTYTKGFTIIIEPFDDKTPTV----PNPILHFSCLDSSIAMKPIFQRFQ- 450
Query: 436 GSIILTSGTLSPMDSFAQELKL------NFPLRVENP----------------HVITSKQ 473
S+++TSGTLSPMD + + L +F + + P V+T
Sbjct: 451 -SVVITSGTLSPMDMYPKILDFEPVVMSSFTMTLARPCLLPMVGSFHLLRYSVLVLTINC 509
Query: 474 IWA--GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
I + IV G ++S + R+ + G +V A+ VPDG++ FF SY ++
Sbjct: 510 ICSPHQIVARGNDQVAISSRFETREDTAVTRNYGQLLVETAKTVPDGIVCFFTSYLYLES 569
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
+A W + I + + ++K +E + ++ A+ +Y+ + GAV AV
Sbjct: 570 VVASWYDQG------IIDTLLRYKLLFIETQDNAETSYALMNYVKACE--CGRGAVLLAV 621
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
RGKVSEG+DF H GRAV++ G+P+ ++ + +YL Q Q +
Sbjct: 622 ARGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLDYLRDQFQ-------------I 668
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
D+ A R Q VGR IR + DYG +IF D+RF+ ++ ++ WIQ H+
Sbjct: 669 RENDFLTFDALRHAAQCVGRAIRGKTDYGIMIFADKRFSRQDKRGKLPKWIQEHL 723
>gi|395836775|ref|XP_003791325.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Otolemur garnettii]
Length = 880
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 168/683 (24%), Positives = 298/683 (43%), Gaps = 88/683 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + ++V LGSR+ LC++++V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVQKSPFGKDVRLVSLGSRQNLCVNQDVKRL-GSVQLINDRCMD 287
Query: 153 LCK------------KGTNRRCNHHSRVADYMKNNPHLGDEPI-----DIEDLVNIGRTF 195
+ + K RR + Y + HL + + DIE LV +G+
Sbjct: 288 MQRSKHEKRNEAEEEKPKRRRQEKQAACPFYSYEHMHLLRDEVLAEVKDIEQLVALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G++ + ++I DEAHNL S
Sbjct: 348 WACPYYGSRFAIPAAQLVVLPYQMLLHAATREAAGIQLQGQVVIIDEAHNLIDAITGIHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNP----------DNFAILRAL----L 301
++S L S+ ++ R S+ P ++F + L
Sbjct: 408 VEVSGSQLCQAHSQLLQYMERYGCRALGSAGRLCIPSVVWMELKTINDFLFQSQIDNINL 467
Query: 302 LKLEKRIAEVPINSKELGFTKPGPYIYELLADLNIT--QETAYKL-IDIVEVAAELLQED 358
K+ + + ++ K GFT+ + +T QE +L + E A + E
Sbjct: 468 FKVRRYCEKSMVSRKLFGFTERYGAVLSSQEKPRLTGFQEFLQRLQPGVTEAPATPVDEG 527
Query: 359 KLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKAS---RT 415
+ + S H + + A+ + +L + S +
Sbjct: 528 QARPPTSPLM--------------------HIEGFLTALTTANQDGRIILNHQGSLSQSS 567
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHVI 469
L + NP + + + E ++++ GTL P+ F ++L + E HVI
Sbjct: 568 LKFLLLNPAVHFAQVVK-ECRAMVIAGGTLQPVSDFREQLLACAGVEAERVVEFSCGHVI 626
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
I ++ G S L+ Y++R+ + E G + + ++P G++ FFPSY
Sbjct: 627 PPDNILPIVLSTGISNRPLDFKYQHRELPQMMDEAGRILFCLCNVIPGGVVCFFPSYEYQ 686
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY------MAKLKDTST 583
Q A W+ + + R+ KK EP+ ++ + +Y +++
Sbjct: 687 RQVHAYWEKSG------VLCRLASRKKIFQEPKSTNQVEQVLTEYSKCIENCGQVRGKMV 740
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMP+ + P+++ K YLD G+
Sbjct: 741 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPYPNVRSPELQEKMAYLDQTLPRIPGKA 800
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ RAVNQ++GR IRH+ D+ +I+F D+R+A P +++ WI+
Sbjct: 801 P-------PGKALAENLCMRAVNQSIGRAIRHQRDFASIVFLDQRYAQPPVLAKMPGWIR 853
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + L +F RE+
Sbjct: 854 DRVKTKATFGSAIAMLQKFHREK 876
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 5 KIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
KI GI FPF Y Q +M ++ Q L+ + ESPTGTGK+L L+C +L+W
Sbjct: 7 KIDGIHFPFPFTPYSIQKDFMAQLYQVLEAGKIGIFESPTGTGKSLSLICGSLSW 61
>gi|396473579|ref|XP_003839371.1| similar to TFIIH basal transcription factor complex helicase
subunit [Leptosphaeria maculans JN3]
gi|312215940|emb|CBX95892.1| similar to TFIIH basal transcription factor complex helicase
subunit [Leptosphaeria maculans JN3]
Length = 792
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 189/748 (25%), Positives = 326/748 (43%), Gaps = 103/748 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDTLPVLFPYPRVYPEQYAYMCDLKRTLDQGGHCVLEMPSGTGKTVSLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK YR
Sbjct: 63 YPEKRKL----------------------------IYCSRTMSEIEKALAELKALMKYRT 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + GS + CR L + C
Sbjct: 95 QELGYEEEFRGLGLTSRKNLCLHPSVKREKSGSIVDARCRSLTAGFVKEKKERGEDVELC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + + ++ G CPYF R + +++ Y+YL+D
Sbjct: 155 VYHDNL-DLLEPHNLIPPGVWTFDGMLKYGEQQKQCPYFTARRMMPYCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + E K+ I++FDEAHN++ +C ++ S DL+ +L ++ N +D T
Sbjct: 214 PKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDVLRKA-TKGVNNLDRKITEM 272
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEV----PINSKEL------GFTKPGPYIYELL 331
+ E L + ++ L E R E P+ +L G + + L
Sbjct: 273 KSTDAEKLQNEYAKLVDGLRSADEARSEEAFMANPVLPDDLLTEAVPGNIRRAEHFVAFL 332
Query: 332 ADLNITQETAYKLIDIVE----VAAELLQEDKLQNKKSTTAC--RIESISNILKI--IFR 383
+T K++++V L++ +K C R+ S+ L++ I
Sbjct: 333 KRFIEYLKTRMKVLNVVSDTPPAFLSHLRDLTYIERKPLRFCAERLTSLVRTLELTSIED 392
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEV 435
+ A + V + +++ S T L C + IA++ F R
Sbjct: 393 YQPLQEVATFATLVATYETGFLIIIEPFESATATVPNPILHLTCLDAAIAIKPVFERFY- 451
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+I+TSGT+SP+D + + L N ++ +T K IV G + S + +R
Sbjct: 452 -SVIVTSGTMSPLDMYPRMLNFNTVVQESFTMTLTRKSFLPMIVDRGNDQNQITSQFEHR 510
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ ++ ++ GN ++ ++ PDG+++FFPSY M+ I+ W+ L T+W K+K
Sbjct: 511 NDLQVQRNFGNLLIEFCKLTPDGVVVFFPSYLYMESIISAWQGME--ILDTVW----KYK 564
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+VE + LA+E + + GAV V RGKVSEG+DF H GR V+ G+
Sbjct: 565 LILVETPDAQETALALETFRTACNN--GRGAVLLCVARGKVSEGIDFDHHYGRTVLCMGV 622
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ ++ + E+L Y+ + FLS + A R Q +GRVIR
Sbjct: 623 PYQYTESRILKARLEFL-------RETYRIKEADFLSFD------AMRHAAQCLGRVIRG 669
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+ DYG ++ D+RF ++SQ+ WIQ
Sbjct: 670 KDDYGIMVLADKRFN--KKQSQLPKWIQ 695
>gi|340506361|gb|EGR32513.1| tfiih basal transcription factor complex helicase subunit, putative
[Ichthyophthirius multifiliis]
Length = 809
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 189/763 (24%), Positives = 325/763 (42%), Gaps = 115/763 (15%)
Query: 4 YKIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+++ Y QL YM+ + L N+ + ++E PTGTGKT+C
Sbjct: 3 FYINDLPVYFPYQSLYKEQLEYMKDLKLILDNQGHGIIEMPTGTGKTVC----------- 51
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK 122
+ K +LY +RT ++ + I+ELK K
Sbjct: 52 ----------------LLSLISSYLLQNQGKFKKLLYCTRTVVEMEKTIEELKFVLENTK 95
Query: 123 MVIL-------------GSREQLCIHREVSLLRGSAQ-NNAC--------RFLCKKGTNR 160
IL +R LCI+ V + + ++ C RF +KG +
Sbjct: 96 KYILEEKREFKFLCTALSARSNLCINPLVQNQQKKEKIDDECLKLTAKWVRFRGEKGEQK 155
Query: 161 RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C + + +I+DL IG+ CPYF+ R+L +IV Y YL
Sbjct: 156 LCTFFENFEEKKEEIEFKEG-IYNIDDLKEIGKQKNICPYFLARKLVNDSNIVVYNYMYL 214
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+ P + + K+ I++FDEAHN++ IC D + +++ LL + + +++
Sbjct: 215 LSPQMKDIINKSLQKDCIVVFDEAHNIDNICLDVFTVNINKRLLDSAYKNVEQ-LELKID 273
Query: 280 RRGQSSDETLNPDNFAILRAL-----------LLKLEKRIAEVPINSKELGFTKPGPYIY 328
S ++L + +L L L ++ E+ S L P++
Sbjct: 274 NMKNQSQQSLENEYKQLLNGLKKKILLQKNNFYLLIKGVFEELAKQSIPLQIRLAKPFVL 333
Query: 329 ELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI--ESISNI---LKIIFR 383
L L + + I + + L + ++QN T+ + E +S + L+I
Sbjct: 334 FLKKILMFLKNKLKEKNCINQDPPQFLSDMQIQNHIDQTSLKFAEERLSQLFMSLEITDN 393
Query: 384 DKGTAHSAYYRVHVREA---------------DANAADVLKGKASRTLSWWCFNPGIAMQ 428
D+ A + + A D + +D L L++ C + +A+Q
Sbjct: 394 DEYVAITTIAQFSTLLAMNQRGFKIIFQPSPLDGSLSDPL-------LTFTCLDSSLAIQ 446
Query: 429 EFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ-IWAGIVPVGPSGYL 487
+ E S+ILTSGT+SP+D + + L N P +++ + S+ I IV G
Sbjct: 447 NVFK-EYASVILTSGTMSPLDIYPKILNFN-PFMLKSIDIELSRNSINPIIVTKGLDFTA 504
Query: 488 LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTI 547
L+S + R ++ + G +++I++I PDG++ FFPSY M+Q I W +
Sbjct: 505 LSSEFEARQNMTVTRSFGALLIDISKICPDGIVAFFPSYRYMEQIIFEWDQDGILDELRK 564
Query: 548 WERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
++ + K V + QS DY GA+FF++ RGKV+EG+DF + G
Sbjct: 565 YKLVYFESKDVAQTSQSLFHFRRACDY--------GRGAIFFSIARGKVAEGIDFNEQYG 616
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
R V++ G P DP + + +YL + EY E A R Q
Sbjct: 617 RCVIMLGFPVQNSNDPILLERVKYLTENFKVTKNEYIEF-------------DAMRQCAQ 663
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS 710
+GRV+R ++DYG +I ++RFA K ++ WI+ I+ Y+
Sbjct: 664 CLGRVMRGKNDYGLMIMAEKRFARSLVKKKLPEWIKKQIKDYN 706
>gi|170591680|ref|XP_001900598.1| probable DNA helicase ERCC2/XPD - southern platyfish [Brugia
malayi]
gi|158592210|gb|EDP30812.1| probable DNA helicase ERCC2/XPD - southern platyfish, putative
[Brugia malayi]
Length = 763
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 187/758 (24%), Positives = 336/758 (44%), Gaps = 126/758 (16%)
Query: 13 FPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP++ Y Q++YM ++ ++L K + LLE P+GTGKT+ LL +A+
Sbjct: 7 FPYDYIYPEQILYMSELKKTLDAKGHCLLEMPSGTGKTVSLLSLVIAYMLRF-------- 58
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------SNYRPK-- 122
L ++Y SRT ++ + ++EL+ + +P
Sbjct: 59 -------------------PDHLDKLVYCSRTIPEIEKCVEELRNLFKYYEQCDGKPPSL 99
Query: 123 -MVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGT--NRR-------CNHHSRVADY 171
V L +R+ LCI+ VS LR GS + AC+ L RR C ++ +
Sbjct: 100 FAVALSARKNLCINESVSSLRQGSLVDGACQKLTASFVRAKRRLRPDLPCCAFFEKLDE- 158
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ + + D ++++L +G+ G CPYF++R + IV Y+Y++DP + +
Sbjct: 159 -QKDFNYPDGVYNLQNLRKLGQQKGICPYFLSRNVVDRAHIVVYSYHYILDPKIAELVSK 217
Query: 232 EW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLN 290
+ ++S ++FDEAHN++ +C ++ +S L + +A + I + +E N
Sbjct: 218 NFSRHSCVVFDEAHNIDNVCIES----MSVSLTKTTVEKATQKLGILEEHVQRLREE--N 271
Query: 291 PDNFAILRALLLKLEKRIAEVPINSKEL---------------GFTKPGPYIYELLADLN 335
+ + L++ +RI E N + L G + + L N
Sbjct: 272 SEQLRVEYDRLVEGLRRIEEERTNDQILANPVLPDMILKEAVPGTIRNALHFISFLRRFN 331
Query: 336 --ITQETAYKLIDIVEVAAELLQEDKLQ--NKKSTTAC--RIESISNILK---------- 379
+ K + I AA L + L +++ C R S++ L+
Sbjct: 332 EYLKHRMRTKTVLIESPAAFLRDINDLMHIDRRPLRFCAERFASLTRTLELADISDFSSL 391
Query: 380 IIFRDKGTAHSAYYR---VHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEV 435
++ + T S Y R + + D + S TL C + +A++ F R
Sbjct: 392 VLITNFATLVSTYARGFTIVIEPLDEKSG----TSHSCTLHLSCMDASVAIRPIFQRYH- 446
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYL-------L 488
++++TSGTLSP+D + + L + + + I IV G Y +
Sbjct: 447 -TVVITSGTLSPLDMYPKILDFDPAIMASLSMTLARPCIAPLIVSKGSVAYAHSNDQVAM 505
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
S + +R+ + G+ ++ +A +VPDG+++FF SY M+ I+ W + I
Sbjct: 506 TSRFESREDAAVIRNYGSLVLELASLVPDGVVVFFTSYLYMENVISTWYDQG------II 559
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
+ + K+K +E + +A+E Y+ GA+FF+V RGKVSEG+DF+ H GR
Sbjct: 560 DELLKYKLLFIETTDALETSIALEKYVEACD--CGRGAIFFSVARGKVSEGIDFSHHLGR 617
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
AV++ G+P+ +R + EYL + Q G + D+ A R Q
Sbjct: 618 AVIMLGVPYVYTESRILRARLEYL----REQLG---------IRENDFLTFDAMRQAAQC 664
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+GR +R + DYG ++F D+RF+ + ++ WIQ +I
Sbjct: 665 MGRALRGKSDYGLMVFADKRFSRKDKMGKLPRWIQEYI 702
>gi|402080753|gb|EJT75898.1| DEAD_2 domain-containing protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 936
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 206/741 (27%), Positives = 329/741 (44%), Gaps = 135/741 (18%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP----------------------KMVILGSREQLCI 134
I YTSRTHSQL Q I EL+ N+ P K + L SR++LCI
Sbjct: 217 IFYTSRTHSQLSQFISELRRPNFPPSFPNPSAGADQGQADGSQAECVKHIPLSSRQRLCI 276
Query: 135 HREVSLLRG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLG------DEPI---- 183
+ V+ L SA N+ C L + + N ++ N +LG D +
Sbjct: 277 NPAVARLGSVSAINDRCAELQTPKSGSKGNK----CPFVPNQENLGETHEFRDTALATLP 332
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIED +G++ CPY+ TR +I+ PY L+ R+ G++ K S+++ DEA
Sbjct: 333 DIEDAHRLGKSLRVCPYYATRTAIPGAEIITLPYPLLLQRSAREAFGIDLKGSVVVIDEA 392
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAIL----RA 299
HN+ A + ++ G L A+ + + + R G+ L +N ++ RA
Sbjct: 393 HNIMDAVAGVHAAEVRLGDL----RRAREMLSVYAKRFGKK----LKGENRIMVGQVARA 444
Query: 300 -------LLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAA 352
L LE R + ++ + L TK G ++ A + QE+ KL +E A
Sbjct: 445 VQGLSEWLERTLEARTEQGIVDPRVLLKTK-GMDQMDMFALVGYIQES--KLAFKIESYA 501
Query: 353 ELLQEDKLQ--NKKSTTACR--IESISNILKIIFRDKGTAHSAYYRVHV-READANAADV 407
L E K + K++TT + S+S L + T S+ R+ R A+ AD
Sbjct: 502 TRLDEKKAEAAGKQATTRSSPVLHSLSGFLLAL-----TNLSSEGRIFFERLPPASPAD- 555
Query: 408 LKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-KLNFPLRVEN- 465
KA LS+ +P A + +I+L GT+SP + L ++ P ++
Sbjct: 556 ---KADIKLSYLLLSPTHAFSSIAS-SARAIVLAGGTMSPFQDYETHLFPMHPPAKITTL 611
Query: 466 --PHVITSKQ--IW--AGIVPVGPSGY------LLNSSYRNRDSIEYKQELGNTIVNIAR 513
HVI +W + + P GP+ + + S++ R Q+LG I+N
Sbjct: 612 SCGHVIPPSNLCVWTLSSMRP-GPAAAKGTGNDVFDFSFQKRRDKNMIQQLGTAILNTCS 670
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHG--NLTTIWERICKHKKPVVEPRQSSL----- 566
+VPDG+++FFPSY +D+ IA WK G IW+R+ K E + S
Sbjct: 671 VVPDGVVVFFPSYGYLDEVIASWKERPSGPTGPPPIWDRLQAKKAVFRESKGGSSEEVLQ 730
Query: 567 -FPLAI----EDYMAKLK-----DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
+ AI ED A K +T+ SGA+ +V GK+SEG++F+D GR VVI G+P
Sbjct: 731 NYTSAILGGAEDAKASAKKTEPNNTAQSGALLLSVVGGKMSEGINFSDRLGRCVVIVGLP 790
Query: 617 FATMTDPKVRLKREYLD-----------------LQAQSQGGEYKE--TKLSFLSGEDWY 657
+ + P+ + + EY++ Q+ G +E + ++Y
Sbjct: 791 YPNIASPEWKARMEYIESSTVDRLLGKQQQQQQQQQSTQAAGMTREQAAAAGKQAAREFY 850
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC--------- 708
RAVNQ++GR IRHR DY AI+ D RF + ++ WI+ +
Sbjct: 851 ENACMRAVNQSIGRAIRHRGDYAAIVLLDSRFGADRIRGKLPGWIRGGMPAPGGAEERRA 910
Query: 709 -YSKFGDVVYTLTRFFREERI 728
++ L++FFRE+R+
Sbjct: 911 REGGLPGLMGALSKFFREKRV 931
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCN--ALLESPTGTGKTLCLLCATLAW 59
+D PF YD QL +M V LQ A+LESPTGTGK+L L+CA + W
Sbjct: 18 VDFNHPFTPYDVQLEFMSTVYSVLQQGDGQVAVLESPTGTGKSLSLICACMTW 70
>gi|281208566|gb|EFA82742.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 997
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 175/307 (57%), Gaps = 22/307 (7%)
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE--NPHVITSKQIWA 476
W NP +A + S S+ILTSGTLSP+ SFA EL FP+ E N IT K++W
Sbjct: 688 WSMNPRVAFKSISE-NTRSVILTSGTLSPLSSFASELGAPFPITAELGNLEDIT-KRVWI 745
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
G + G + L++++++ D + ++ LGN I+ ++PDG+L+FFPSY+ MD+ I W
Sbjct: 746 GTLGFGANNTKLDATFKSSDMLVFQDALGNAILKHIELIPDGVLVFFPSYFFMDKMILRW 805
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKV 596
K T +++ I + K EP+ + F + DY ++ S G + F++ RGKV
Sbjct: 806 KKTG------VYDLIDRIKPIFTEPKFAKDFQPVLNDYNKAVQ--SKRGGLLFSIYRGKV 857
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDW 656
SEG++F+D R V+I G+P+ D K+ LK++Y +L + K ++G W
Sbjct: 858 SEGINFSDQFARGVIIIGIPYPNFKDLKIDLKKKYNELNS----------KKGMMNGSSW 907
Query: 657 YNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVV 716
YN QA RA+NQA+GR IRH+ D+G+I+ DERF +PS + S W + I +
Sbjct: 908 YNLQAYRALNQALGRCIRHKDDFGSILLIDERFTNPSLWTNFSKWARVCITNNKNISSSL 967
Query: 717 YTLTRFF 723
+L +FF
Sbjct: 968 TSLQQFF 974
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 13/174 (7%)
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNA 149
G +PTI + SRTHSQ++Q+ EL+ + YRP+MV+LGSR+Q C++ ++ L +
Sbjct: 315 GSINVPTIFFCSRTHSQIKQLTDELRKTPYRPRMVVLGSRDQYCVNSKLEGLYSKKER-- 372
Query: 150 CRFLCKKGTNRRCNHHSRVADY-----MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTR 204
C+ + K ++ C H + Y PH + DIED G+ CPYF ++
Sbjct: 373 CKKMVK---DKECIFHRQSKTYNLATQFSGAPH---QVWDIEDFRVAGKETRECPYFASK 426
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
+ T +++F PYNY+ID R ++ NSI+IFDEAHN+E AASFD+
Sbjct: 427 SMVPTANLIFCPYNYIIDMSIRSHFKDKFTNSIVIFDEAHNIEDALMSAASFDI 480
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
TY I G +V+FPF+ Y+CQ M +++++L+ NALLES TGTGKTL LLCATL W+
Sbjct: 142 TYLINGYNVKFPFQPYECQSTMMHQILEALKGGHNALLESATGTGKTLSLLCATLEWQ 199
>gi|449299736|gb|EMC95749.1| hypothetical protein BAUCODRAFT_502978 [Baudoinia compniacensis
UAMH 10762]
Length = 803
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 187/747 (25%), Positives = 331/747 (44%), Gaps = 103/747 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FMIDDLPVLFPYPRIYPEQYAYMSDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK YR
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMKYRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + GS + CR L + C
Sbjct: 95 DQLGEVEDFRGLGLTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKKERGEDVDLC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + ++ ++ G CPYF R + +++ Y+YL+D
Sbjct: 155 IYHDNL-DLLEPHNLIPPGVWTLDGMLRYGEQHKQCPYFTARRMMPFCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + + E K+ I++FDEAHN++ +C ++ S DL+ L A+N D +
Sbjct: 214 PKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTEESLRRAGRGAQNLED-KIKQM 272
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL----------GFTKPGPYIYELL 331
++ E L + ++ L + R E +++ L G + + L
Sbjct: 273 KETDAEKLQNEYAKLVEGLREADQAREEEAFMSNPALPDDLLKEAIPGNIRRAEHFTAFL 332
Query: 332 ADLNITQETAYKLIDIV-EVAAELL---QEDKLQNKKSTTAC--RIESISNILKI--IFR 383
+T K++ ++ E L +E KK C R+ S+ L++ I
Sbjct: 333 KRFIEYLKTRMKVLHVISETPPSFLAHLKELTFIEKKPLRFCAERLTSLVRTLELTNIED 392
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEV 435
+ A + V + +L+ S T L + C + IA++ F R
Sbjct: 393 YQPLQEVASFATLVATYETGFLLILEPYESDTATVPNPELHFTCLDAAIAIKPVFDRF-- 450
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+I+TSGT+SP++ + + L + ++ + + IV G +++ ++ R
Sbjct: 451 SSVIITSGTISPLEMYPKMLGFSTVVQESYAMTLARRSFLPMIVTRGSDQSQMSTGFQTR 510
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
D + + GN ++ +++ PDG+++FFPSY M++ I+ W+ S G L ++W K K
Sbjct: 511 DDPQVVRNYGNLLIEFSKLTPDGIVVFFPSYLYMERVISSWQ--SMGILDSVW----KSK 564
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+VE S LA+E Y + ++ GAV V RGKVSEG+DF H GR V+ G+
Sbjct: 565 LILVETPDSQETSLALETY--RTACSNGRGAVLLCVARGKVSEGIDFDHHYGRTVLCIGV 622
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PF ++ + E+L +ET + D+ + A R Q +GRV+R
Sbjct: 623 PFQYTESRILKARLEFL-----------RETYR--IRENDFLSFDAMRHCAQCLGRVLRG 669
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWI 702
+ DYG ++ D+RFA +++Q+ WI
Sbjct: 670 KDDYGIMVMADKRFA--KKRTQLPKWI 694
>gi|189211309|ref|XP_001941985.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978078|gb|EDU44704.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 850
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 188/729 (25%), Positives = 308/729 (42%), Gaps = 99/729 (13%)
Query: 60 RKSLGSF--STLGSQVNNQISGSQSSVNSSQSGDSKLPT---ILYTSRTHSQLRQVIQEL 114
R G+F S L ++ ++ SV+ + D + P I + SRTHSQL Q EL
Sbjct: 160 RAKAGTFDESGLSAETQALMASLGYSVDVPKEDDGETPDETKIFFCSRTHSQLTQFSSEL 219
Query: 115 KTSNYRP--------------------KMVILGSREQLCIHREVSLLR-GSAQNNACRFL 153
P K + LGSR+ LCI+ +V+ L +A N C L
Sbjct: 220 GRVKMPPAIASDDTENGGGIESLVEDVKHLTLGSRKNLCINSQVNRLESATAINERCLEL 279
Query: 154 CKKGT-NRRCNHH-SRVADYMKNN--PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKT 209
+ RC H ++ ++ + N+ H + DIEDL ++G+ G
Sbjct: 280 QQSSVAETRCPHMPTKESEPLINDFRDHALAKIRDIEDLGSLGKKLG------------- 326
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
IV PY L+ R+ LG+ ++ I+I DEAHNL DA + S + + +
Sbjct: 327 --IVTLPYPLLLQRSAREALGISLRDHIVIIDEAHNL----MDAIAGIYSVSVTLEQVQQ 380
Query: 270 AKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYE 329
A+ + + Q L N + + L+ +A + I + G + +
Sbjct: 381 ARTQLTVYL----QKFRNKLKGKNRVYVAQTVRILDSIVAYLQIIHAKPGMSDGLVDMVS 436
Query: 330 LLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKII----FRDK 385
+++ + Q YKL LQE +L K E N ++ K
Sbjct: 437 IMSGKGVDQINIYKL-------NTYLQESRLARKVDGYTAYAEETKNKDVMVSTKQVVKK 489
Query: 386 GTAHSAYYRVHVR---------EADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG 436
G H+ +HV+ + + S TL + +P +E E
Sbjct: 490 GPRHNVPVLMHVQAFLLSLMNPSTEGRFFYSREEDTSTTLRYMLLDPTFHFKEIVE-EAR 548
Query: 437 SIILTSGTLSPMDSFAQELKLNF--PLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSS 491
+++L GT+SPM + Q L L++ P ++ HVI + A V G + +
Sbjct: 549 AVVLAGGTMSPMSDYEQHL-LSYLEPSKIMTLSCGHVIPPSNLLAVPVMRTSGGVEFDFT 607
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS-HGNLTTIWER 550
+ NR+ +LG I+N ++ +PDGL++FFPSY +D CIA WK + T W+
Sbjct: 608 FENRNKEMTMIDLGTAILNFSQHIPDGLVVFFPSYAYLDTCIAAWKRIKPSASKATFWDG 667
Query: 551 ICKHKKPVVEPR------------QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
+ K +E R + + + Y A + + GA+ FAV G +SE
Sbjct: 668 FTQSKPVFLEQRSQQQASDQVPASKDAAVASVLSAYSAAIASGNGRGALLFAVIGGTLSE 727
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G++F++ GR VV+ G+PF + + K +Y+ + GG+ K + D+Y
Sbjct: 728 GINFSNALGRGVVVVGLPFPNAQSAEWKAKMQYIATKTAKNGGDGKA------AARDFYE 781
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYT 718
RAVNQ VGR IRH+ DY AI+ D R+ + ++ WI+ + DV
Sbjct: 782 NACMRAVNQCVGRAIRHKGDYAAILMLDRRYGSRRIQDKLPKWIRGSLTTGLGVRDVEGR 841
Query: 719 LTRFFREER 727
L FF +++
Sbjct: 842 LDEFFVDKK 850
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D P+ YD Q +M V + L++ + ESPTGTGK+L L+C +L W
Sbjct: 9 DFHHPYTPYDIQNEFMGAVYKCLEDGKVGIFESPTGTGKSLSLICGSLTW 58
>gi|403223632|dbj|BAM41762.1| helicase [Theileria orientalis strain Shintoku]
Length = 954
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 172/322 (53%), Gaps = 25/322 (7%)
Query: 414 RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELK---LNFPLRVENPHVIT 470
+ +++ C P R + S+ILTSGTL P+D + + L F ++++N HVI
Sbjct: 513 KIMNFACLQPIPTFIRIKREGLRSLILTSGTLGPLDVLERHIGGNYLKFEIKLQNDHVID 572
Query: 471 SKQIWAGIVPVGPSG-YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
K++WAG+V +L+S+Y R + Y LG + + VP G+L+FF SY +M
Sbjct: 573 PKRVWAGVVTGNDEDPNILSSAYNKRGDLNYITALGRALYGFIKSVPSGVLVFFGSYMVM 632
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSG--AV 587
+ ++CWK + + + I +P R + + P + + + KD SG ++
Sbjct: 633 NNTLSCWKRLGLYSKMEMEKSIFVENRPPGFVRDNDIIPESTQALFTRYKDNIDSGRASM 692
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
FFA+CRG+++EG+DF+D R + + G+P+ + + LK +YLD K
Sbjct: 693 FFAICRGRMAEGIDFSDDYCRGIFLCGIPYPSRYEDTTALKMDYLD-------------K 739
Query: 648 LSFLSGE------DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
LS +GE +WY QA +A+NQA+GR IRH DYGAI+ D RF P K+ IS W
Sbjct: 740 LSVATGENLNLSHEWYTTQAIKAINQAIGRSIRHIEDYGAIMLADYRFRFPPVKTSISKW 799
Query: 702 IQPHIQCYSKFGDVVYTLTRFF 723
+ ++ Y+K D + L+ FF
Sbjct: 800 VLDRLKVYTKIEDCMEELSSFF 821
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 160/275 (58%), Gaps = 27/275 (9%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I GIDV+FP+E Y+ Q +ME VI+++++ NALLESPTGTGKTL L+CA+LA S +
Sbjct: 11 IGGIDVKFPYEPYELQKSFMESVIKAIKDGKNALLESPTGTGKTLSLICASLACILSNKT 70
Query: 66 FSTLGSQV--------NNQISGSQ-SSVNSSQSGDSKLP--------TILYTSRTHSQLR 108
LG + + I SQ S+ + D K P I+YTSRTHSQL+
Sbjct: 71 NKILGGKTLEEEKKVNQDDILVSQLISLKGAIEKDLKKPKSILSNKMNIIYTSRTHSQLK 130
Query: 109 QVIQELKTSNYRP-------KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRR 161
QVI E++ S+Y K +L SR+ LCI+ L G NN CR L + NR+
Sbjct: 131 QVISEVRKSSYCKEFHQKGLKAALLASRDLLCINPAKGNLSGDHLNNFCRLLVQ---NRK 187
Query: 162 CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
C +++ + N +E +DIED+V +G+ CPYF ++ Q+ D++ PYNYL+
Sbjct: 188 CIYYNSLRGSKNNEEAQFNELVDIEDMVKMGKRGTFCPYFAVKDAQENADLILVPYNYLL 247
Query: 222 DPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
P R + ++ KNSI+I DEAHN+E + +A+SF
Sbjct: 248 SPSVRDAMDLKTKNSIVIIDEAHNVESVAEEASSF 282
>gi|156400058|ref|XP_001638817.1| predicted protein [Nematostella vectensis]
gi|156225941|gb|EDO46754.1| predicted protein [Nematostella vectensis]
Length = 735
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 195/757 (25%), Positives = 336/757 (44%), Gaps = 114/757 (15%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M ++ ++L K + LLE P+GTGKT+ LL +A+ K+
Sbjct: 1 MLELKRTLDAKGHCLLEMPSGTGKTVSLLSLIVAYLKN---------------------- 38
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNY------RPKMVILG--SREQLCI 134
+L ++Y SRT ++ +V++ELK T Y +P ++ L SR+ LCI
Sbjct: 39 -----KPLELTKLIYCSRTVPEIEKVMEELKKLTEYYESETGEKPNILALALSSRKNLCI 93
Query: 135 HREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSR----VADYMKNNPHLG-DEPI----- 183
H EV+ R G + C L + R H V ++ ++ LG DE +
Sbjct: 94 HPEVAGEREGKKVDGKC--LSMTASFVRLKHKEDSSVPVCNFYEDFDSLGRDEKMPPGSY 151
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDE 242
+++DL GR G CPYF+ R +++ Y+Y++DP + E K ++++FDE
Sbjct: 152 NLDDLRQFGRKKGWCPYFLARRAIYHANVIVYSYHYMLDPKIADLVSKELDKKAVVVFDE 211
Query: 243 AHNLEGICADAASFDLSSGLLT---ACISEAKNCIDISSTRRGQSSDETLNP-------- 291
AHN++ +C D+ S +S L A + + ID Q E N
Sbjct: 212 AHNIDNVCIDSMSVTISRRTLDRSHANVESLASVIDRIKATDAQKLREEYNRLVEGLRQA 271
Query: 292 ----DNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PYIYELLADLNITQETAY 342
D +L +L E VP N ++ +GF + Y+ L ++ QE+
Sbjct: 272 SEARDTDIVLSNPVLPDEVLQESVPGNIRKAEHFVGFMRRFIEYLKTRLRIQHVVQESPM 331
Query: 343 KLIDIVEVAAELLQEDKLQNKK-STTACRIESISNILKII-FRDKG-TAHSAYYRVHVRE 399
+ + Q+ ++ K A R+ S+ L+I +D G A + V
Sbjct: 332 SFLQ------HIYQQVCIERKPLRFCAERLSSLLRTLEIPEMQDYGPLVLIANFATLVST 385
Query: 400 ADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSF 451
+ +++ RT L + C + IA++ F R + S+++TSGTLSP+D +
Sbjct: 386 YNKGFNIIIEPFDDRTPTIPNPILHFSCMDASIAVKPVFDRFQ--SVVITSGTLSPIDMY 443
Query: 452 AQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNI 511
+ L + + IV G + + + R+ + + GN + +
Sbjct: 444 PKILDFRPVTMATFTMTLARTCLCPMIVSRGSDQVAMTTKFEMREDLAVIRNYGNLLTEM 503
Query: 512 ARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAI 571
+ +VPDG++ FF SY M+ ++ W + I I K+K +E ++ LA+
Sbjct: 504 SAVVPDGIVCFFTSYLYMESVVSLWHDQG------IISNIQKNKLLFIETTDAAETSLAL 557
Query: 572 EDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY 631
+Y ++ GA+ +V RGKVSEG+DF H GRAV++ G+P+ ++ + EY
Sbjct: 558 HNYQKACENGR--GAILLSVARGKVSEGIDFDHHYGRAVIMFGIPYVYTQSRILKARLEY 615
Query: 632 LDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAH 691
L Q + ++ L+F A R Q VGR IR + DYG ++F D+RF+
Sbjct: 616 LREQFNIRENDF----LTF---------DAMRHAAQCVGRAIRGKTDYGIMVFADKRFSK 662
Query: 692 PSRKSQISLWIQPHIQ---CYSKFGDVVYTLTRFFRE 725
++ ++ WIQ +++ C + V RF R+
Sbjct: 663 VDKRGKLPKWIQEYLKESLCNLSTDESVQIAKRFLRQ 699
>gi|328776825|ref|XP_394659.4| PREDICTED: Fanconi anemia group J protein homolog isoform 1 [Apis
mellifera]
Length = 305
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 162/288 (56%), Gaps = 22/288 (7%)
Query: 421 FNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP 480
NPG+A + L IIL SGTL+P SF EL +F + HVI +Q++A +P
Sbjct: 1 MNPGVAFSPLA-LNARCIILASGTLTPTTSFQSELGTSFTHVLNTGHVIPKEQVYATCIP 59
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
GP+G LL ++Y+ ++ +++ ELG ++++ +P G+L FF SY +M+ + WK S
Sbjct: 60 KGPNGILLKANYQIVNTWQFQDELGQVLLDVCESIPHGILCFFSSYNVMNIQMERWKQNS 119
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----TSGAVFFAVCRGK 595
IW +I K +EPR + +Y ++ TS +GA+F AV RGK
Sbjct: 120 ------IWSKITSVKTVFIEPRHGGGLTDIMNEYREVIEYTSEPKGRITGALFLAVFRGK 173
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGED 655
V+EG+DF D+ R V+ G+P+A DP + +K Y D+ S+G L G +
Sbjct: 174 VAEGIDFRDNEARCVITVGIPYAVRKDPVIDMKMTYNDMNV-SKG---------LLRGSE 223
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
WY+ QA RA+NQA+GR +RH HD+GA++ DERF P K + W++
Sbjct: 224 WYSIQAYRALNQALGRCLRHIHDWGAVLLVDERFLVPQNKENLPKWVK 271
>gi|168063226|ref|XP_001783574.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664903|gb|EDQ51606.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 858
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 191/707 (27%), Positives = 321/707 (45%), Gaps = 93/707 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIH-REVSLLRGSAQ-NNACRF 152
+ + SRTHSQL Q + ELK + + + V LGSR+ LCI+ +V+ L+ S + N C
Sbjct: 157 VFFCSRTHSQLSQFVGELKRTKFATSLQTVSLGSRKTLCINPADVAKLKSSERINERCLE 216
Query: 153 LCKKGTNRRCNHHSRVADYMKNN-------PHLGDE--------------PIDIEDLVNI 191
L K ++ + + + M+ P L + +D+EDLV +
Sbjct: 217 LHKAKSSGQAGSKAVKDNQMQKRKVKSSGCPMLKKQRLQRQFKEKLELSGAMDVEDLVKL 276
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G+ G CPY+ +R D+V PY L+ R+ LGV+ K+ ++I DEAHNL +
Sbjct: 277 GQELGTCPYYGSRRAVPAADVVVLPYQSLLHSATRETLGVKLKDCVIIIDEAHNLVDTVS 336
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD---ETLNPDNFAILRALLLKLEKRI 308
+ S +S L S+ ++ R +S+ ETL A+L L + +
Sbjct: 337 NIYSCQVSVTQLKQVSSQLSEYLEKFKNRLAESNRRYIETLLLLIKALLDCLAVPQQGGS 396
Query: 309 AEVPINSKELGFTKPGPYIYELLAD-LNITQETAY-KLIDIVEVAAELLQEDKLQNKKST 366
E + +++ L D +N+ + Y K +IV + ++ L+ ST
Sbjct: 397 KERQNGRTDSKMLTINDFVFSLKIDSINLLKLRHYIKESNIVHKVSSYGEKLTLEQTVST 456
Query: 367 TACRIESISNILKIIFRDKGTAHSAY-----YRVHVREADANAADVLKGKASRTLSWWCF 421
+ R S + K A + + + + + AD + ++ + L W
Sbjct: 457 SQSR----SGVPKGSVPQSNNALTGFHALADFVLALTNADKDGRVLVVPSVGKGLELWDG 512
Query: 422 NPGIAM----QEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFP-LRVENPHVITSKQI 474
+ M + F+ + E ++IL GTL P+ L FP L E H+ + I
Sbjct: 513 HLKFIMLNATKHFTEIVEEARTVILAGGTLQPISELRDRL---FPQLPHEKVHLFSCGHI 569
Query: 475 W--AGIVPV----GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I+P+ GP G+ + +Y++R +ELG I N++ IVP+G+++FFPS+
Sbjct: 570 VPRESILPIAIAKGPGGHTFDFTYQSRSCQTTIEELGRLINNVSSIVPEGIVVFFPSFEY 629
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVV-EPRQSSLFPLAIEDYMAKLKDTSTS--- 584
Q A W T G L +I + KK V EPR +S ++ Y + TS
Sbjct: 630 ESQVHATW--TDKGILASI-----QMKKHVYREPRSASEVEDVLQKYRNSITKTSDKADI 682
Query: 585 ------GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
GA+ V GK+SEG++F+D GR VV+ G+P+ +DP++ + Y++ + +
Sbjct: 683 TTENRRGALLLCVVGGKMSEGINFSDGMGRCVVMVGLPYPNPSDPELIERIRYIEQLSAA 742
Query: 639 QGGEYKE---------TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
+ G + + G ++Y +AVNQ++GR IRH DY AI+ D R+
Sbjct: 743 EAGVGNDGAALNGNNVLQRCGQRGREYYENLCMKAVNQSIGRAIRHIGDYAAILLVDVRY 802
Query: 690 ----------AHPSR-KSQISLWI-QPHIQCYSKFGDVVYTLTRFFR 724
A PS S++ WI + + S FG+V+ L +FF+
Sbjct: 803 TSTSGPPGPNAKPSGPASKLPDWILERLVPVTSSFGEVIKLLHKFFK 849
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M V ++LQ ++ESPTGTGKTL L+C+ L W
Sbjct: 1 MNVVYRALQKGGVCIVESPTGTGKTLSLICSALQW 35
>gi|259488995|tpe|CBF88902.1| TPA: 5' to 3' DNA helicase (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 791
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 192/760 (25%), Positives = 335/760 (44%), Gaps = 129/760 (16%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVTLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
L +Y SRT S++ + + EL+
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELRELMKFRS 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLC--------KKGTN-R 160
T ++R + L SR+ LC+H V + G+ + CR L +KG +
Sbjct: 95 EQLGYTEDFRA--LGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEKKEKGEDVE 152
Query: 161 RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ + + ++ L+N G CPYF R + +++ Y+YL
Sbjct: 153 LCVYHENL-DLLEPHNLVPPGVFTLDGLLNYGEQHKQCPYFSARRMMPYCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + + E+ K+ I++FDEAHN++ +C ++ S D++ L A N
Sbjct: 212 LDPKIAERVSKEFSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKATRGANNLE--RKI 269
Query: 280 RRGQSSD-ETLNPDNFAILRALLLKLEKRIAE----------------VPINSKE----L 318
+ +SSD E LN + ++ L + R + VP N + +
Sbjct: 270 QDVKSSDAEKLNNEYMKLVEGLREAEQARDEDQFISNPVLPDDLLKEAVPGNIRRAEHFV 329
Query: 319 GFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTAC--RIESISN 376
F K +I L + +T + + + EL +K C R+ S+
Sbjct: 330 AFLKR--FIEYLKTRMKVTHTISETPLSFLNHVKEL----TFIERKPLRFCAERLTSLVR 383
Query: 377 ILKII-------------FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNP 423
L++I F + + + + + ++ AA V + L + C +
Sbjct: 384 TLELINIEDYQPLQEVATFATLVSTYDKGFLLILEPFESEAATV----PNPVLHFTCLDA 439
Query: 424 GIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVG 482
IA++ F R S+++TSGTLSP++ + + L ++ + + IV G
Sbjct: 440 AIAIKPVFDRF--SSVVITSGTLSPLEMYPKMLGFTTVMQESYSMTLARRSFLPMIVTRG 497
Query: 483 PSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHG 542
++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+ W+ G
Sbjct: 498 SDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGVVVFFPSYLYMESIISMWQGM--G 555
Query: 543 NLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDF 602
L +IW +K +VE + LA+E Y + + GA+ F V RGKVSEG+DF
Sbjct: 556 ILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGALLFCVARGKVSEGIDF 609
Query: 603 ADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQAS 662
H GRAV+ G+PF ++ + E+L Y+ + FLS + A
Sbjct: 610 DHHYGRAVLCIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD------AM 656
Query: 663 RAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 657 RHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRNQLPKWI 694
>gi|357129541|ref|XP_003566420.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Brachypodium distachyon]
Length = 932
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 191/706 (27%), Positives = 318/706 (45%), Gaps = 102/706 (14%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNYRPK--MVILGSREQLCIHREVSLLRGSAQ--NNAC 150
P + +TSRTHSQL Q + ELK + + K MV LGSR LCI+ +V L GSA N C
Sbjct: 247 PKVYFTSRTHSQLSQFVGELKKTQFSAKLRMVCLGSRMNLCINNDVRKL-GSANRINERC 305
Query: 151 RFLCKKGTNRRC-----NHHSRVADYMKNNPHL--------------GDEPIDIEDLVNI 191
L K + + N +R A P L + +DIEDL I
Sbjct: 306 LELQKNKKSSKIKVDGDNQKARQAKISCQCPMLRKRSLQKEFRSEVSANGALDIEDLAQI 365
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G+ G CPY+ R++ D+V PY L+ R+ LG+ KNS++I DEAHNL
Sbjct: 366 GKKIGTCPYYGVRDMVPAADLVVLPYQSLLLKSARESLGLNLKNSVIIIDEAHNLADSLT 425
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
+ ++ L A +S + +D R Q+ L N ++ L++ L + V
Sbjct: 426 SMYNSKVTCPQLRAALSHLEAYLD-----RFQN---VLGAGNRRYIQTLIV-LTRSFQRV 476
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
++ ++ + L L+I I+IV++ + L+E + +K S A ++
Sbjct: 477 LMSGEDGSCAVTSVTVNNFLFSLDIDN------INIVKL-CQYLKESNIIHKVSGYANKL 529
Query: 372 ----ESISNILKIIFRDKGTAHSAYYRV--HVREADANAAD----VLKGKASRT-----L 416
+ SN+ D+G+ S++ V +R + D V + K L
Sbjct: 530 IITQDGASNLNHQQQHDEGSTISSFQAVANFLRSLLNSNVDGRIIVARQKPGGQPEDAYL 589
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHVIT 470
+ P E + + ++++ GTL P++ L+L L + H++
Sbjct: 590 KFIMLCPEKIFSEVTE-DAHAVVMAGGTLQPIEE--TRLRLFPSLSTSDVKFFSCNHIVP 646
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
++ I V GPSG + S+ +R S +ELG + NI IVPDG+++FF SY
Sbjct: 647 AESILPIAVTRGPSGMEFDFSFGSRRSPAMIEELGRFLCNIVTIVPDGVVMFFTSYEYEK 706
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL---FPLAIEDYMAKLKDTSTSGAV 587
Q W T+ G ++ I ++ C ++P + + AI+ + T +GA+
Sbjct: 707 QVYDAW--TASGTISKISKKKCVFREPKNSVNVEGILNKYKEAIQSCSEHSQGTGVNGAL 764
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKV--------------------RL 627
AV GK+SEG++F+D GR V++ G+P+ + D ++ L
Sbjct: 765 LLAVVGGKISEGINFSDGMGRCVLMVGLPYPSPDDVELMETIKHIGNHSSSSTVGDNNSL 824
Query: 628 KREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDE 687
+Y D + + G + + SG + Y +AVNQ++GR IRH +DY A++ D
Sbjct: 825 SSQY-DHECTVEPG-FDTLRRCGKSGREHYENLCMKAVNQSIGRAIRHVNDYAAMLLVDS 882
Query: 688 RFAH---------PSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
R++ P+ K + WI+ + C +G+V L +FF+
Sbjct: 883 RYSSTSSSRSLSCPAEK--LPQWIKRRLTCGKNYGEVHRLLLQFFK 926
Score = 47.8 bits (112), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQN--KCNALLESPTGTGKTLCLLCATLAW 59
FPF Y Q +M + +L + + ALLESPTGTGKTL ++C+ L W
Sbjct: 86 FPFTPYPIQSEFMSFLYAALSSGPRALALLESPTGTGKTLSIICSALQW 134
>gi|380495771|emb|CCF32142.1| DNA repair helicase [Colletotrichum higginsianum]
Length = 896
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 198/726 (27%), Positives = 316/726 (43%), Gaps = 127/726 (17%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYR---PKMVILG------------------SREQLCIH 135
I YTSRTHSQL Q I EL+ + P ++ G SR++LCI+
Sbjct: 207 IYYTSRTHSQLTQFIHELRRPEFPSSIPSSIVQGQREDDRRSKEPVKHLPLSSRQKLCIN 266
Query: 136 REVSLLRG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP----IDIEDLVN 190
V+ L SA N+ C L K +C + + D + D DIEDL +
Sbjct: 267 PSVARLGSLSAINDRCSELQKPKAKDKCPYTLK-EDNITQTHQFRDTAHATLPDIEDLYH 325
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ +R +IV PY L+ R LG++ + +I+I DEAHN+
Sbjct: 326 LGKKLSVCPYYASRAAIAGAEIVTLPYPLLLQKNARDALGIKLEGNIVIVDEAHNI---- 381
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAE 310
DA + +S + + + A+ + + R G+ L +N ++ + +E
Sbjct: 382 MDAVANVYASEVKLSELRRARQMLGVYVKRFGKK----LKGENRVMVGQVGRVIEGLSEW 437
Query: 311 VPINSKELGFTKPGPYIYE--LLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTA 368
+ SK P + LL + Q ++LI + +QE KL K +
Sbjct: 438 MDAQSK---LKSPQGIVDSKVLLRCKGVDQINLFRLI-------QYIQESKLAYKIESYV 487
Query: 369 CRIE--------------SISNILKII--FRDKGTAHSAYYRVHVREADANAADVLKGKA 412
+E S + +L I+ F T S+ R+ + + D+
Sbjct: 488 AHVEEEAADASHGKGPPRSSTPVLHILSSFLISLTNLSSEGRIFYEKLATSPPDI----- 542
Query: 413 SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP------ 466
LS+ +P A + ++IL GT+SP D + L FP E+
Sbjct: 543 --QLSYLLLSPTHAFSSIA-TSARAVILAGGTMSPFDDYKSHL---FPYLPESKLTTLSC 596
Query: 467 -HVITSKQ--IW--AGIVP---VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
HVI +W AG P P+ S++ R ++ K LG I N+ +VPDG
Sbjct: 597 GHVIPPSNLCVWTLAGSQPGLKRDPNS-TFEFSFQRRGDMDMKGSLGLAIFNLCNVVPDG 655
Query: 519 LLIFFPSYYLMDQCIACWKN--TSHG----NLTTIWERICKHKKPVVEPRQSSLFPLAIE 572
+++FFPSY +++ + WK T G T++W+R+ + K+ + E R S + +E
Sbjct: 656 VVVFFPSYGYLEEVVTAWKGVATRQGQTPQGATSLWDRLQQRKEVLSETRGGSSDEV-LE 714
Query: 573 DY-MAKLKDT---------STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
Y A L D GA+ +V GK+SEG++F+D GR V+I G+P+ +
Sbjct: 715 SYSRAILGDGREPKPGAAGKPRGALLLSVVGGKMSEGINFSDRLGRCVIIVGLPYPNINS 774
Query: 623 PKVRLKREYLD------LQAQSQGGEYKETKLSF--------LSGEDWYNQQASRAVNQA 668
P+ + K EY++ L S G TK+S + D+Y RAVNQ+
Sbjct: 775 PEWKAKTEYIETTTVQRLTTDSSG----TTKMSRDEALAVAKQAARDFYENACMRAVNQS 830
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK---FGDVVYTLTRFFRE 725
+GR IRH+ DY AI+ D RF + ++ WI+ + S ++ L FFR
Sbjct: 831 IGRAIRHQGDYAAIVLVDRRFGTDRIRGKLPGWIRGGLDGDSHEKGLPQLMGALGSFFRS 890
Query: 726 ERICGS 731
+R GS
Sbjct: 891 KRAVGS 896
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAW 59
ID P+ YD Q +M+ LQ N +LESPTGTGK+L L+CA+L W
Sbjct: 17 IDFNHPYTPYDVQTDFMKTAYGVLQRGNGQVGILESPTGTGKSLSLICASLTW 69
>gi|405117928|gb|AFR92703.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. grubii H99]
Length = 773
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 177/684 (25%), Positives = 316/684 (46%), Gaps = 89/684 (13%)
Query: 97 ILYTSRTHSQLRQVIQELK-TSNYRPKM---------VILGSREQLCIHREVSL-LRGSA 145
++Y SRT ++ + + ELK YR +M + L SR LC+H EVS +G
Sbjct: 43 LIYCSRTVPEIEKALAELKRLMVYRAEMGANDGDFRGLGLTSRRNLCLHPEVSKEKKGKV 102
Query: 146 QNNACR-----FLCKKGTNR-----RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTF 195
++ CR F C+KG C+ H + +Y N + ++D+ G+
Sbjct: 103 VDSRCRDLTSAFACEKGRTDPGSVPLCSFHEELNNYEPGN-LIPPGVYTLDDVKKYGQEK 161
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAA 254
G CPYF R + +D+V ++YL+DP + + E K SI+IFDEAHN++ +C ++
Sbjct: 162 GVCPYFTIRRMLPFLDVVIYSFHYLLDPKVAEQVSAEMSKESIVIFDEAHNIDNVCIES- 220
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQ--SSDETLNPDNFAILRALLLKLEKRIAE-- 310
LS L + A ++ S + + +D D +A L L + +R +
Sbjct: 221 ---LSIDLTRPMLDSAARSVNKLSDKIAEIKETDAKKLEDEYAKLVEGLQEANERAEDED 277
Query: 311 ---VPINSKEL-GFTKPG----------------PYIYELLADLNITQETAYKLIDIVEV 350
P+ SK++ PG Y+ + L++ ET + ++
Sbjct: 278 MLVSPVLSKDMVDEAVPGNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFLAHLKE 337
Query: 351 AAELLQED-KLQNKKSTTACRIESISNILKIIFRDK----GTAHSAY---YRVHVREADA 402
+ Q K +++ T+ R ++N+ + K GT + Y + + + +
Sbjct: 338 ITYIEQRPLKFASERLTSLVRTLELTNLEEHSALQKVAGFGTLVATYEKGFLLILEPYET 397
Query: 403 NAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
A V + + C +P +A+ F R S+++TSGT+SP+D + + L+ +
Sbjct: 398 EHATV----PNPIFHFTCLDPSLAIAPVFDRF--ASVVITSGTISPLDMYPKMLQFQPVM 451
Query: 462 RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
P +T ++ G ++S + R+ + G+ ++ +AR VPDG++
Sbjct: 452 EQSYPMTLTRNAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSILIEMARTVPDGVVA 511
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT 581
FFPSY M+ ++ W + G L+ +W KHK VE + +A+ +Y +
Sbjct: 512 FFPSYLYMESIVSAWYDM--GILSEVW----KHKLLFVETPDAMETSIALRNYREACNN- 564
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
GAV +V RGKVSEG+DF + GRAV++ G+P+ ++ + E+L + +
Sbjct: 565 -GRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIREN 623
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
+Y L+F A R Q VGRV+R + D+G ++F D+RFA +++++ W
Sbjct: 624 DY----LTF---------DAMRHAAQCVGRVLRGKTDWGLMVFADKRFARQDKRAKLPKW 670
Query: 702 IQPHI-QCYSKFG-DVVYTLTRFF 723
I +I + +S DV +L + F
Sbjct: 671 INSYITEAHSNLSTDVAVSLAKKF 694
>gi|328770825|gb|EGF80866.1| hypothetical protein BATDEDRAFT_29908 [Batrachochytrium
dendrobatidis JAM81]
Length = 758
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 195/773 (25%), Positives = 331/773 (42%), Gaps = 158/773 (20%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ + + + FP+E Y Q YM+ + ++L + + LLE P+GTGKT+ LL +A+
Sbjct: 3 FTLDDLPIIFPYEYIYPEQYAYMKDMKRALDAQGHCLLEMPSGTGKTISLLSLIVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + ++Y SRT ++ + + EL + YR
Sbjct: 60 -------------------------QQFYPEKRKLIYCSRTVPEIEKALAELSRLMKYRE 94
Query: 122 KMVI--------LGSREQLCIHREVSL-LRGSAQNNACRFLCKKGTNRRCNHHSRV---- 168
+ + L SR LCIH VS RG+ + CR L H +
Sbjct: 95 EQGLVENFLGLGLTSRRNLCIHPIVSKEKRGTVTDAKCRNLTSPWVRENAKHEPDIELCE 154
Query: 169 -------ADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
AD P +EDL CPYF+ R L +++ Y+YL+
Sbjct: 155 FYETLEAADTTATVP---SGVYTLEDLKEYSTKKKYCPYFLARRLLPFANVIIYSYHYLL 211
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC------ISEAKNCI 274
DP + E ++ I++FDEAHN++ +C ++ S D+S +L A +S +
Sbjct: 212 DPKVADMVSKELSRDCIVVFDEAHNIDNVCTESLSIDISKPMLDASARSVAELSRRIESM 271
Query: 275 DISST----------RRGQSSDET-------LNPDNF----------------AILRALL 301
+S++ R+ Q S + + PD+ A LR +
Sbjct: 272 KVSNSEKLQNEYTRLRQAQESRDAGEIMTNPVLPDDILQESVPGNIRRAEHFVAFLRRFI 331
Query: 302 LKLEKR------IAEVPI----NSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA 351
L+ R +AE P+ + KE+ F P L + E LI +E+
Sbjct: 332 EYLKTRMRVMHVVAESPLSFLQHVKEITFIDKKP--------LRFSAERLGSLIKTLEIN 383
Query: 352 AELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGK 411
+L LQ ++ S + ++ T + V + E N D +
Sbjct: 384 -DLTDYSALQ--------KVASFATLV-------ATYQKGF--VLILEPFENDMDTIPNP 425
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
L + C + +A++ F R S+I+TSGTLSPM+ + L P+ E+ +
Sbjct: 426 V---LHFTCLDATLAIKPVFDRF--SSVIITSGTLSPMELYPMLLGFE-PVVTESYQMTL 479
Query: 471 SKQIWAG-IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
++ + IV G ++S + R+ + + GN ++ A+I PDGL+ FFPSY M
Sbjct: 480 TRTCFLPLIVTRGSDQVTVSSKFEVRNDVAVVRNYGNILLEFAKITPDGLVCFFPSYLYM 539
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFF 589
+ +A W + + + K K +E ++ +A+E+Y + GAV
Sbjct: 540 ESIVAAWNDLG------MLRELLKLKLIFIETPDATETSIALENYRQACDN--GRGAVLL 591
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
+V RGKVSEG+DF + GRAV++ G+P+ ++ + EYL ++ + ++ L+
Sbjct: 592 SVARGKVSEGVDFDHNYGRAVILFGIPYQYTESRILKARLEYLRDNSRIRENDF----LT 647
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
F A R Q VGRV+R + DYG ++F D+RF ++S++ WI
Sbjct: 648 F---------DAMRHGAQCVGRVLRGKTDYGLMVFADKRFGRMDKRSKLPKWI 691
>gi|403412410|emb|CCL99110.1| predicted protein [Fibroporia radiculosa]
Length = 759
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 189/746 (25%), Positives = 333/746 (44%), Gaps = 124/746 (16%)
Query: 43 PTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
P+GTGKT+ LL +++++ + L +Y SR
Sbjct: 2 PSGTGKTVSLLSLIVSYQQFYPAKRKL----------------------------IYCSR 33
Query: 103 THSQLRQVIQELK-TSNYRPKMVI---------------LGSREQLCIHREVSL-LRGSA 145
T ++ + ++ELK YR L SR+ LCIH EVS +G
Sbjct: 34 TVPEIEKALEELKRLMVYRLSSAETEEEKEKERSFYGLGLTSRKNLCIHPEVSKEKKGKV 93
Query: 146 QNNACRFL-----CKKGTNR-----RCNHHSRVADYMKNNPHLGDEP--IDIEDLVNIGR 193
+ CR L C+KG C+ H + K +P P + D++ GR
Sbjct: 94 VDARCRDLTNSAVCEKGRQNPGSVDLCDWHENLG---KLDPGSLIPPGIWTLADVLQYGR 150
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICAD 252
CPYF+ R + VDI+ ++YL+DP + + E K++I++FDEAHN++ +C +
Sbjct: 151 DNTICPYFLVRRMMPFVDIIIYSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNIDNVCIE 210
Query: 253 AASFDLSSGLLTACISEAKNCID----ISSTRRGQSSDETLN---------PDNFAILRA 299
+ S DLS +L + D I T + DE D A +
Sbjct: 211 SLSIDLSRPMLESAARSVGKLGDRIEEIKKTDASKLQDEYAKLVEGLQEAANDEDAFMSN 270
Query: 300 LLLKLEKRIAEVPINSKE----LGFTKPG-PYIYELLADLNITQETAYKLI----DIVEV 350
+L + +P N ++ + F K Y+ + L++ ET + DI +
Sbjct: 271 PVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLSFLQHLKDITYI 330
Query: 351 AAELLQ--EDKLQN-KKSTTACRIESISNILKII-------FRDKGTAHSAYYRVHVREA 400
L+ ++LQ+ ++ R++ +++ K+ +KG H + + +
Sbjct: 331 ERRPLRFCAERLQSLVRTLDLSRLDEYASLQKVASFATLVATYEKGAIHVGFLLI-LEPF 389
Query: 401 DANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
+ + A V + C +P IA++ F R ++++TSGT+SP+D + + L+
Sbjct: 390 ETDNATV----PNPIFHLTCLDPAIAIKPVFERF--STVVITSGTISPLDMYPKMLQFTP 443
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
++ +T ++ G ++S + R+ + G+ ++ ++IVPDG+
Sbjct: 444 VVQETYAMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGI 503
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
+ FFPSY M+ +A W + G L +W KHK VE ++ +A+E+Y
Sbjct: 504 VAFFPSYLYMESIVAAWNDM--GILNEVW----KHKLIFVETPDANETSIALENYRRACD 557
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
+ GAV +V RGKVSEG+DF + GRAV++ G+P+ ++ + EYL + +
Sbjct: 558 N--GRGAVLLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIR 615
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
E+ L F A R Q VGRV+R + D+G ++F D+RFA +++++
Sbjct: 616 ESEF----LGF---------DAMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLP 662
Query: 700 LWIQPHI-QCYSKFG-DVVYTLTRFF 723
WI +I + S D+ TL++ F
Sbjct: 663 RWINQYITETASNLSTDMALTLSKLF 688
>gi|291224421|ref|XP_002732204.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like
[Saccoglossus kowalevskii]
Length = 853
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 171/678 (25%), Positives = 296/678 (43%), Gaps = 91/678 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I + SRTHSQL Q ++E++ S + K+V LGSR+ LCI+ V R S N C L
Sbjct: 210 IFFCSRTHSQLAQFVREVQKSPFGEDTKVVTLGSRQNLCINESVRRFRSLSLINEKCLEL 269
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPY--------FMTRE 205
K R+ N + +G CP+ + R
Sbjct: 270 QKNKKERKRNDDEETQRKRRKKA--------------VG-----CPFNNYTALMDYKDRV 310
Query: 206 LQKTVDI----VFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSG 261
L + DI V PYN L+ R+ G++ + +I+I DEAHNL ++ S ++
Sbjct: 311 LVEVQDIEQLLVVLPYNTLLHKSTREACGIKLEGNIVIIDEAHNLLDTISNIHSIMITGM 370
Query: 262 LLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFT 321
LT S+ ++ +R + + F +L L+ L R+ P
Sbjct: 371 QLTRAHSQLSQYMEKYKSRLKAKNLMYIKQILF-LLNCLVKGLNGRLGVPP------HLQ 423
Query: 322 KPGPYIYELLADLNITQETAYKLIDIVEVA--AELLQEDKLQN------------KKSTT 367
GP +LL + T I++ +V E Q K N K+ +
Sbjct: 424 NTGPSSVKLLTINDFLFTTQMDNINLFKVRKYCEKSQISKKLNGFLERYQPGVEIKQQKS 483
Query: 368 ACRIESISNILK------IIFRDKGTAHSAYYRVHVREADANAADVLKGK---ASRTLSW 418
+C ++ L+ + + + AD + V+ + + ++ +
Sbjct: 484 SCNKSGMTQFLQDMSKKNTVEQKNNNSSGXXXXXXXXXADKDGRVVINKQETLSESSVKF 543
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHVITSK 472
NP + +E + S+I+ GT+ P+ F ++L + E HVI
Sbjct: 544 LLLNPAVHFKEIV-TKCKSVIVAGGTMQPISEFKEQLFFATGVTPEKISEFACGHVIPDD 602
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
+ + GP G L+ +Y++RD E ELG + N+ +VP G++ FFPSY
Sbjct: 603 HLLPIALCTGPVGVELDFTYQSRDKKEMLDELGRVMCNVCSVVPGGVVCFFPSYEYE--- 659
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK-------DTSTSG 585
+K +H + T + R+ KK + EPR+++L + +Y + ++ ++ +G
Sbjct: 660 ---YKVHAHWDKTGVLTRLGAKKKVLREPRKANLSENVLAEYTSCIQQCDKTSNESGITG 716
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKE 645
A+ +V GK+SEG++F+D GR +V+ G+P+ + P+++ K +YL+ G+ K
Sbjct: 717 ALLLSVVGGKMSEGINFSDGLGRCIVMVGLPYPNIKSPELKEKMDYLN-STMGPSGDGK- 774
Query: 646 TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPH 705
L G+ Y +AVNQ++GR IRH+ DY I+ D R+A ++++ WI
Sbjct: 775 -----LPGQIHYENLCMKAVNQSIGRAIRHKDDYATILLLDHRYAKSHIRTKLPGWIASE 829
Query: 706 IQCYSKFGDVVYTLTRFF 723
+Q KFG + +FF
Sbjct: 830 LQVMQKFGPAQAAIKKFF 847
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 18 YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
YD Q +M ++ Q+L + ESPTGTGK+L L+C L W
Sbjct: 18 YDIQKDFMSQLYQTLDQSKIGIFESPTGTGKSLSLICGALKW 59
>gi|268574822|ref|XP_002642390.1| Hypothetical protein CBG18394 [Caenorhabditis briggsae]
Length = 834
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 182/686 (26%), Positives = 304/686 (44%), Gaps = 99/686 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCK 155
I Y SRTHSQL Q++ EL + ++P++V SR LC++ EV L+ N C L K
Sbjct: 185 IFYASRTHSQLEQLVDELGKTRFQPRVVTCSSRGNLCVNEEVKKLKLNHLINEKCMELRK 244
Query: 156 KGTNRRCNHHSRVADYMKNNPHLGDEPID------IEDLVN---------------IGRT 194
GT+ + + + D + + + IEDLVN G +
Sbjct: 245 NGTSDK-DKKQKTEDGGEKKKKSCSKSCEFYSSTQIEDLVNGVLANKLKTTIQVTKEGVS 303
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPYF +R+ +V PY L+ R G++ K+++++ DEAHN+
Sbjct: 304 SKGCPYFASRKAVPQCQLVLLPYQVLLHEGTRNAWGIDLKDNVIVLDEAHNVLTTINSLY 363
Query: 255 SFDLSSGLLTACIS-------------EAKNCIDISSTRR----------GQSSDETLN- 290
S ++S L+ + +AKN + + + QS ++ +
Sbjct: 364 SAEISEKSLSLALRLIREYNAKYKLRLKAKNLLYMKQLEQLTSKMLIFLNSQSKEDVMTM 423
Query: 291 ---PDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAY-KLID 346
N IL L KL I + + K GF Y+ + A +++ +E KL
Sbjct: 424 AQLSRNLNILELNLFKLATYIEKSDLCKKFHGF-----YLQSMRASIDLKKENEKPKLTG 478
Query: 347 IVEVAAELLQEDKLQNKKSTTACRIE-SISNILKII--FRDKGTAHSAYYRVHVREADAN 403
I ++ + + +K++ +++ R + ++S+ L + F D T R+ +
Sbjct: 479 IQKLMVKKEEAEKIKAEENQEEVRPQITVSSPLFSLKSFIDALTNKCEDGRILI------ 532
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL-----N 458
D K R + NP + E + + +L GT+ P + + L +
Sbjct: 533 --DKTKDPKYR---YILLNPADRLAEVVK-ACRATVLVGGTMEPSELLVETLSRGSVGPD 586
Query: 459 FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
R HVI Q+ A + G +Y+ R + E + +G T+ +++ +P+G
Sbjct: 587 AIRRFSCAHVINDSQLLAVTIQKTVDGKPFQLTYKTRQNPETLKSIGRTLQVLSQHIPNG 646
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
++IF PSY ++ I K T I E+I + K E RQSS L+ DY
Sbjct: 647 VVIFVPSYEILTDLIKKMKETK------IMEQIGRKKSVFAETRQSSSTMLS--DYSTAA 698
Query: 579 KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
K S+ GA+ FAV GK+SEG++F+D GRAV++ G+P+ T ++R + +LD Q +
Sbjct: 699 K--SSRGAILFAVMGGKMSEGINFSDELGRAVIVIGLPYPNKTGVELRERMRFLDSQ-MA 755
Query: 639 QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
GG Y +VNQ++GR IRHR DY A+ D+R+A S KS++
Sbjct: 756 NGGNM------------LYESMCMHSVNQSIGRAIRHRKDYAAVYLFDDRYALESTKSKL 803
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFR 724
S WI Q +F ++ FF+
Sbjct: 804 SAWIGDRTQRNLRFPQIIQKSNAFFK 829
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ 72
FPF+ YD QL M ++ +++ + ESPTGTGK+L +LC+TL W ++ + + ++
Sbjct: 6 FPFQPYDIQLRLMREIRDCIEDGKVGIFESPTGTGKSLSVLCSTLTWLEN--EENRIETE 63
Query: 73 VNNQISGSQSSV-NSSQSGDS---KLPTILYTSRTHSQLRQVIQELK 115
+N ++ Q ++ S +SG S L L + S++ + I++ K
Sbjct: 64 LNEKLRKIQENIAESKKSGASWEDALKLSLEAEKEESEVMEAIEKRK 110
>gi|17137232|ref|NP_477178.1| xeroderma pigmentosum D, isoform B [Drosophila melanogaster]
gi|281363902|ref|NP_001163231.1| xeroderma pigmentosum D, isoform C [Drosophila melanogaster]
gi|4928442|gb|AAD33587.1|AF132140_1 excision repair protein ERCC2/XPD [Drosophila melanogaster]
gi|7291258|gb|AAF46689.1| xeroderma pigmentosum D, isoform B [Drosophila melanogaster]
gi|220945966|gb|ACL85526.1| Xpd-PB [synthetic construct]
gi|272432602|gb|ACZ94503.1| xeroderma pigmentosum D, isoform C [Drosophila melanogaster]
Length = 745
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 194/733 (26%), Positives = 332/733 (45%), Gaps = 107/733 (14%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M ++ +SL K + LLE P+GTGKT LL +A+ V
Sbjct: 1 MLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY-----------------------MV 37
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELKT---------SNYRP-KMVILGSREQLCI 134
++ + ++Y SRT ++ +VI EL+ N P ++L SR+ +CI
Sbjct: 38 EHPET----VRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLVLSSRKNMCI 93
Query: 135 HREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADYMKNNPHLGDE---PI---DI 185
H EVS R G A + C L R + + + Y + G E P+ I
Sbjct: 94 HPEVSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQYFEGFSLEGKESTLPVGVYSI 153
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAH 244
+DL GR+ CPYF+ R IV Y+YL+DP + + E + S ++FDEAH
Sbjct: 154 DDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAH 213
Query: 245 NLEGICADAASFDLS--------------SGLLTACISEAKNCIDISSTRRGQS-SDETL 289
N++ +C D+ S ++ + L+ E N ++ R Q D ++
Sbjct: 214 NIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQGLKDASV 273
Query: 290 NPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PYIYELLADLNITQETAYKL 344
D IL +L + VP N + L F + YI L ++ QE+
Sbjct: 274 QRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGF 333
Query: 345 IDIVEVAAELLQEDK---LQNKKSTTACRIESISNI-----LKII--FRDKGTAHSAYYR 394
+ ++++++ E K ++ ++ R IS++ L +I F + ++ +
Sbjct: 334 LK--DISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFATLVSTYTKGFT 391
Query: 395 VHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQ 453
+ + D V ++ L + C + IAM FSR + ++++TSGTLSPMD + +
Sbjct: 392 IIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRFQ--TVVITSGTLSPMDMYPK 445
Query: 454 ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
L + + + + IV G ++S + R+ + G +V +A+
Sbjct: 446 ILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAK 505
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
VPDG++ FF SY ++ +A W + I + + ++K +E + ++ A+ +
Sbjct: 506 TVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLRYKLLFIETQDNAETSYALMN 559
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y+ K D GAV AV RGKVSEG+DF H GRAV++ G+P+ ++ + +YL
Sbjct: 560 YV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLR 617
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
Q Q + ++ L+F A R Q VGR +R + DYG +IF D+RF+
Sbjct: 618 DQFQIRENDF----LTF---------DAMRHAAQCVGRALRGKTDYGIMIFADKRFSRHD 664
Query: 694 RKSQISLWIQPHI 706
++S++ WIQ H+
Sbjct: 665 KRSRLPKWIQEHL 677
>gi|443898496|dbj|GAC75831.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, 5'-3' helicase subunit RAD3
[Pseudozyma antarctica T-34]
Length = 851
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 191/773 (24%), Positives = 346/773 (44%), Gaps = 108/773 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR-- 60
+ I + V FP+ + Y Q YM + ++L + +LE P+GTGKT+ L ++++
Sbjct: 3 FYIDELPVLFPYPKIYPEQYAYMTDLKRTLDANGHCVLEMPSGTGKTVSLFSLIVSYQLF 62
Query: 61 ------------------KSLGSFSTLGS--QVNNQISGSQSSVNSSQSGDSKLPT---- 96
K+L L N G +S V S + + P
Sbjct: 63 HPAKRKLIYCSRTVPEIEKALAELKRLMEYRARYNVPEGEESHVAKSDADGTNGPADDDI 122
Query: 97 -ILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACR--- 151
+ + Q+ ++ + L SR+ LCIH +V R G + CR
Sbjct: 123 EMKGRGKAGGQMEDILA-----------LGLSSRKNLCIHPDVGRERKGKVVDARCRDMT 171
Query: 152 --FLCKKGTN-----RRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTR 204
+ C+KG + C+ H + M+ + +E++ R G CPYF R
Sbjct: 172 SSWACEKGRQDPGSVQLCDFHEELGK-MEPGQLIPQGVWTLEEVKEYARVKGICPYFAIR 230
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
+ VDI+ ++YL+DP + + E K++I++FDEAHN++ +C ++ S DL+ +L
Sbjct: 231 RMIPFVDIIVYSFHYLLDPKIAEQVSKEMSKDAIVVFDEAHNIDNVCIESLSIDLTRPML 290
Query: 264 TACISEAKNCIDISSTRRGQ--SSDETLNPDNFA-ILRALLLKLEKRIAEV----PINSK 316
+ A I+ S R + +D + D +A ++ L + E+R AE P+
Sbjct: 291 DS----AYRSINQLSERVDEIKRTDASKLQDEYARLVEGLQEQGEQREAESFMANPVLPD 346
Query: 317 EL------GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKST 366
+L G + + L +T +++ +V E A LQ K +K
Sbjct: 347 DLLQEAVPGNIRRAEHFVAFLKRFVEYLKTRMRVLHVVAETPASFLQHLKDITYIERKPL 406
Query: 367 TAC--RIESISNILKIIFRDKGTA--HSAYYRVHVREADANAADVLKGKASRT------- 415
C R+ + L++ D+ +A A + V D +L+ +
Sbjct: 407 RFCAERLRMLVGTLELTRLDEYSALQKVAAFATLVATYDKGFLLILEPFETENATVPNPI 466
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
+ C + +A+ F R S+I+TSGT+SP+D + + LK + ++ +T +
Sbjct: 467 FHFTCLDASLAIAPVFERF--SSVIITSGTISPLDMYPKMLKFDAIVQESYAMTLTRQCF 524
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
++ G ++S + R+ + G+ ++ A+ VPDG++ FFPSY M+ +A
Sbjct: 525 LPLVITRGSDQVAISSRFEVRNDPAVVRNYGSILIEYAKCVPDGIVAFFPSYLYMESIVA 584
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + G L +W K+K +E + +A+E+Y + + GA+ +V RG
Sbjct: 585 AWHDM--GILDEVW----KYKLIFIETPDAPETSIALENY--RRACDNGRGAILLSVARG 636
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF + GRAV++ G+P+ ++ + E+L + + ++ L+F
Sbjct: 637 KVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEFLRDNFRIRENDF----LTF---- 688
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRV+R + DYG ++F D+RFA +++++ WI +I+
Sbjct: 689 -----DAMRHAAQCVGRVLRGKTDYGLMVFADKRFARADKRNKLPKWIAQYIK 736
>gi|195123085|ref|XP_002006040.1| GI20811 [Drosophila mojavensis]
gi|193911108|gb|EDW09975.1| GI20811 [Drosophila mojavensis]
Length = 745
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 194/733 (26%), Positives = 332/733 (45%), Gaps = 107/733 (14%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M ++ +SL K + LLE P+GTGKT LL +A+ I ++
Sbjct: 1 MLELKRSLDAKGHCLLEMPSGTGKTATLLSLVVAY----------------MIEHPET-- 42
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQEL--------KTSNYRPKM--VILGSREQLCI 134
+ ++Y SRT ++ +VI EL + + P ++L SR+ LCI
Sbjct: 43 ---------VRKLIYCSRTVPEIEKVIAELQNLMAYYERNAPVAPGFTGLVLSSRKNLCI 93
Query: 135 HREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADYMKNNPHLGDE---PI---DI 185
H EVS R G A + C L R + + Y + G E P+ I
Sbjct: 94 HPEVSKEREGKAVDGKCYGLTASYIRERHELDPEVPICQYFEGFTLEGKESTLPVGVYSI 153
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAH 244
+DL GR+ CPYF+ R IV Y+YL+DP + + E + S ++FDEAH
Sbjct: 154 DDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMTRESCVVFDEAH 213
Query: 245 NLEGICADAASFDLSS----------GLLTACISEAK----NCIDISSTRRGQS-SDETL 289
N++ +C D+ S ++ LT + E + N ++ R Q D ++
Sbjct: 214 NIDNVCIDSMSVKINRRTVERSTNALNQLTKLVQEMREEDTNRLNEEYQRMVQGLKDASV 273
Query: 290 NPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PYIYELLADLNITQETAYKL 344
D IL +L + VP N + L F + YI L ++ QE+
Sbjct: 274 QRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGF 333
Query: 345 IDIVEVAAELLQEDK---LQNKKSTTACRIESISNI-----LKII--FRDKGTAHSAYYR 394
+ +V++++ E K ++ ++ R I+++ L +I F + ++ +
Sbjct: 334 LK--DVSSKICIERKPLRFCAERLSSLLRTLEITDMTEFGALTLITHFATLVSTYTKGFT 391
Query: 395 VHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQ 453
+ + D V ++ + + C + IAM FSR + ++++TSGTLSPMD + +
Sbjct: 392 IIIEPFDDKTPTV----SNPIMHFSCLDSSIAMAPVFSRFQ--TVVITSGTLSPMDMYPK 445
Query: 454 ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
L + + + + IV G ++S + R+ + G +V +A+
Sbjct: 446 ILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVAISSKFETREDTAVIRNYGQLLVEVAK 505
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
VPDG++ FF SY ++ +A W + I + + ++K +E + ++ A+ +
Sbjct: 506 TVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLRYKLLFIETQDNAETSYALMN 559
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y+ K D GAV AV RGKVSEG+DF H GRAV++ G+P+ ++ + +YL
Sbjct: 560 YV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLR 617
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
Q Q + ++ L+F A R Q VGR +R + DYG +IF D+RF+
Sbjct: 618 DQFQIRENDF----LTF---------DAMRHAAQCVGRALRGKTDYGIMIFADKRFSRQD 664
Query: 694 RKSQISLWIQPHI 706
++S++ WIQ H+
Sbjct: 665 KRSRLPKWIQEHL 677
>gi|196005263|ref|XP_002112498.1| hypothetical protein TRIADDRAFT_25417 [Trichoplax adhaerens]
gi|190584539|gb|EDV24608.1| hypothetical protein TRIADDRAFT_25417 [Trichoplax adhaerens]
Length = 899
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 188/710 (26%), Positives = 313/710 (44%), Gaps = 133/710 (18%)
Query: 91 DSKLPTILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ-N 147
D ++ I Y SRTHSQL Q I E+K N+ ++V+LGSR+ LCI+ V L+ + N
Sbjct: 202 DPEITKIYYCSRTHSQLAQFIGEVKKCNFADSIRLVVLGSRQNLCINPSVVKLKSVNKIN 261
Query: 148 NACRFLCK-----------KGTNRR-----------CNHHSR--VADYMKNNPHLGDEPI 183
+ C + K K +N++ N SR + DY+ + H
Sbjct: 262 DKCLEMQKRKKEEKVTVAHKDSNKKRKISKLSGCPYLNIASRNDLRDYILADIH------ 315
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIE++V+ G + CPY+ R DIV PYN L+ R G++ +++I DEA
Sbjct: 316 DIEEVVHFGTSLKACPYYGARAALSQADIVVTPYNTLLSKSTRDACGIKLAGNVVIVDEA 375
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLK 303
HNL + S +LS LT EA + + R + L+ N ++ L+
Sbjct: 376 HNLLETIGNINSVELSHRQLT----EAMHLLQCYQDRYKKR----LSARNLVFIKQLIYL 427
Query: 304 LEKRIAEVPINSKELGFTKPGPYIY---ELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
L K I + N+ + +Y + L LN+ +K+ L
Sbjct: 428 L-KCIVGIFTNTNNKTSPEKETSVYRSNDFLLSLNVDNLNLFKI---------------L 471
Query: 361 QNKKSTTACR-----IESISNILKIIFRDKGTAH-----------SAYYRVH-----VRE 399
+ K T+ + +E + +++ R + T H +A+ + +
Sbjct: 472 RYCKRTSISKKLNGFMERYKSTVQVSTRSESTEHGENDSIYDSYMAAFQNIENFLELLTN 531
Query: 400 ADANAADVLKGKASR---TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELK 456
+ + V+ +A + T+ + NP E + ++I+ GT+ P++ +
Sbjct: 532 PNQDGRVVVNHQAMQSQSTVKYLLLNPASYFAEIIN-DCRAVIIAGGTMQPVNDLRH--R 588
Query: 457 LNFPLRVENP--------HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTI 508
L F VE+ HVI +I + GPSG L+ S+++R+ E G +
Sbjct: 589 LFFACGVESSRITEFTCGHVIAPDRILPFSLSKGPSGLELDFSFQSRELNTMIDEFGRIL 648
Query: 509 VNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL--TTIWERICKHKKPVVEPRQSSL 566
+N ++P G++ FF SY ++ + L T I E+I + KK EPR+S+
Sbjct: 649 LNFVNVIPGGMVCFFASYD--------YETIVYTRLEKTGILEKIGRKKKVYREPRKSAK 700
Query: 567 FPLAIEDYM-------AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR----------- 608
+ DY KL TS +GAV F+V GK+SEG++F+D GR
Sbjct: 701 VEQVLSDYARCIQLSDKKLGSTSLNGAVLFSVVGGKMSEGINFSDGLGRLCILIIIINTT 760
Query: 609 -----AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
V++ G+P+ P++ K EYLD + + +T G+ +Y +
Sbjct: 761 QLFLRCVIMVGLPYPNSKSPELIEKMEYLDSLSSVSSPDSSKT-----LGQMYYENICLK 815
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFG 713
AVNQ++GR IRH +DY AI+ D R+ S +S ++ WI + Y +FG
Sbjct: 816 AVNQSIGRAIRHINDYAAIVLLDYRYKRSSIRSGLASWINERLIEYDRFG 865
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D +FPF+ YD Q+ +M + LQ++ + ESPTGTGK+L L+C + W
Sbjct: 16 DFDFPFQPYDIQVQFMRTLYTVLQDRKIGIFESPTGTGKSLSLICGAITW 65
>gi|212545032|ref|XP_002152670.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210065639|gb|EEA19733.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 887
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 184/697 (26%), Positives = 316/697 (45%), Gaps = 88/697 (12%)
Query: 90 GDSKLPT-ILYTSRTHSQLRQVIQELKTSNYRP-----------------------KMVI 125
GD++ T I Y SRTHSQL Q QEL+ N K +
Sbjct: 214 GDNENQTRIYYCSRTHSQLSQFAQELRRVNLPSSLPSLQESAEGEKQEHTELEEVIKHLT 273
Query: 126 LGSREQLCIHREVSLL-RGSAQNNACRFLCKKGT--NRRCNH------HSRVADYMKNNP 176
LGSR+QLCI+ VS L +A N C L + G ++RC++ + D+
Sbjct: 274 LGSRKQLCINPRVSNLGNATAINERCMELQQSGVAADKRCSYLPTKESEGMLFDF---RD 330
Query: 177 HLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
+ DIED+ +G+ CPY+ R+ +I+ PY L+ R+ L + ++
Sbjct: 331 RVLSTVQDIEDISQVGKQLAICPYYAARKAIDQCEIITLPYPLLLQRSSREALDLSLRDH 390
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
I+I DEAHNL ++ S ++ L + + TR + + +
Sbjct: 391 IVIIDEAHNLMDAISNLHSVSVTLEQLRTSLFQLTTYARKFQTRL-KGKNRVYVTQVIRL 449
Query: 297 LRALLLKLEK-----RIAEVPINSKEL----GFTKPGPY-IYELLADLNITQETAYKLID 346
+ AL L+ + +EV + +L G + PY + L + + A K+
Sbjct: 450 VSALAENLQSLSDKHKSSEVIVQYSDLVSGKGVDQINPYKLTRYLQESKL----ARKVDG 505
Query: 347 IVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAAD 406
VE A Q+ K+ N K+T + + ++F+ + ++ + +D
Sbjct: 506 YVENANN--QDGKVNNGKATRE------NTTIPVLFQVQ-----SFILTLMNPSDEGQLF 552
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-KLNFPLRVEN 465
+ K L + +P ++ E ++IL GT+SPM ++ L P +++
Sbjct: 553 LNKADGGVLLRYLLLDPTSHFRDIVD-EARTVILAGGTMSPMSDYSDHLFSYVSPEKLDT 611
Query: 466 ---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
HVI K + A I+ G G N ++ R+S +LG TI NI ++PDG+++F
Sbjct: 612 YSFGHVIPPKNLTARILTKGVLGSDFNFTFDQRNSDSMITDLGQTIANICAVIPDGVVVF 671
Query: 523 FPSYYLMDQCIACWKNTSH-GNLTTIWERICKHKKPVVEP---RQSSLFPLAIEDYMAKL 578
FPSY ++Q + W+ + G +I+ I K+K V E ++ S + +Y K+
Sbjct: 672 FPSYDYLNQVLNAWRKPNKTGGAVSIFAEIEKYKPIVYESNNHKKESNTDDTLLEYSKKV 731
Query: 579 KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
+ S SGA+ +V G++SEG++F+D GR V+I G+PF + + K +++ Q +
Sbjct: 732 E--SGSGALLLSVVGGRLSEGINFSDKLGRGVLIVGLPFPNIHSAVWKAKIGHIEKQTYA 789
Query: 639 QGGEYKETKLSF-----------LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDE 687
+ + ET+L +G D++ RAVNQ +GR IRHR+DY AI+ D
Sbjct: 790 KLTQ-NETELPVSRRREAETAAKAAGRDFFENSCMRAVNQCIGRAIRHRNDYAAIVLIDR 848
Query: 688 RFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
R+ + ++ WI+ + S ++ L FF+
Sbjct: 849 RYETQRIQGKLPTWIRQSLAS-SATSNIRGDLISFFK 884
>gi|148232300|ref|NP_001083272.1| BRCA1 interacting protein C-terminal helicase 1 [Xenopus laevis]
gi|37747678|gb|AAH60014.1| MGC68622 protein [Xenopus laevis]
Length = 713
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 235/474 (49%), Gaps = 59/474 (12%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGSAQNNACR 151
K+P I + +RTH Q+ Q+ +EL+ + Y +M IL SRE C+H ++ S +N C+
Sbjct: 249 KVPKIFFGTRTHKQIAQITRELRRTAYSSVRMTILSSREHTCVHPDIH----SNRNERCK 304
Query: 152 FL--CKKGTNRRCNH--HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQ 207
L K G + R H H + H D+ DIE+LV +G+ C YF REL
Sbjct: 305 ELLEAKDGHSCRFYHGVHKMNEQSLLQYRHGIDKAWDIEELVGLGKRLRACAYFAARELM 364
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
+ DIVF PYNYL+D R+ + + +N ++I DEAHN+E ++ASF S L
Sbjct: 365 QGADIVFCPYNYLLDSQIRESMEICLENQVVILDEAHNIEDCARESASFSCSDEQLMY-- 422
Query: 268 SEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKP---- 323
A++ ID + SD P LRA+ L I + E +
Sbjct: 423 --ARDEIDSMVNHGIRVSDH--EP-----LRAVCYSLTNWIRQCSDQLVEREYEASCKVW 473
Query: 324 -GPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN-KKSTTACRIESISN----- 376
G I + D+ IT T + L+ V +AA + +E+K+ +I ++S
Sbjct: 474 NGKEILSIFHDMGITNAT-FPLLK-VNLAAVVEKEEKITMFHGQENVIKIPTLSPQSQMV 531
Query: 377 ------ILKIIFRDKGTAHSAYYRVHVREAD--ANAADV-------LKGKASR------- 414
+L +FR + + YRV ++++ N D+ + ++ R
Sbjct: 532 LKGLFLVLDYLFR-QNNRFAEDYRVALQQSYTWTNRPDIPDENGFFARPRSRRSIRQKIM 590
Query: 415 --TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
TL++WC NP +A + S +I+LTSGTLSPM SF+ EL + F +++E HVI
Sbjct: 591 VYTLNFWCLNPAVAFSDLSS-NARTIVLTSGTLSPMGSFSSELGVKFSIQLEANHVIHKS 649
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
Q+W G V GP G L +++++ ++ +++ E+G ++++ + V G+L F PSY
Sbjct: 650 QVWVGTVGAGPKGRKLCATFQHTETFDFQDEIGALLLSVCQTVSHGILCFLPSY 703
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
+ Y I G+ + FP AY QL M +++ L K + LLESPTG+GK+L LLC+ LAW+
Sbjct: 5 LSEYTIGGVKILFPCRAYPSQLAMMNSIMRGLNCKQHCLLESPTGSGKSLALLCSALAWQ 64
Query: 61 KSL 63
+SL
Sbjct: 65 QSL 67
>gi|448110971|ref|XP_004201733.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359464722|emb|CCE88427.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 183/664 (27%), Positives = 303/664 (45%), Gaps = 83/664 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP---------KMVILGSREQLCIHREVSLLRG-SAQ 146
I+++SRTHSQL Q +L +++ P K V L SR+QLCIH VS L +
Sbjct: 199 IIFSSRTHSQLSQFAHQLGLTSFNPTFEGIPERIKFVPLASRKQLCIHPRVSHLTSLESI 258
Query: 147 NNACRFLCKKGTNRRCNHHSRVADYMKNN-PHLGDEPI-DIEDLVNIGRTFGPCPYFMTR 204
N AC L ++ T C + + +K L I DIEDL ++G CPY+ R
Sbjct: 259 NEACIDL-QQNTKEGCTFNPKHGSTLKKKFSDLSFTKIHDIEDLGSLGTGLRICPYYSVR 317
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLT 264
K+ +++ PY L+ R+ L V+ ++I++ DEAHNL D L +
Sbjct: 318 HGLKSAEVIACPYQILLQKSAREMLNVDVDDAIIVIDEAHNL---------IDTIISLYS 368
Query: 265 ACISEAKNCIDISSTRRG-----QSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELG 319
I N ++I +G + + LN N R L+KL K + +
Sbjct: 369 VSI----NLLEIEMVIKGVKHYLKKFMKKLNSGN----RINLMKLLKLCQSIQNFIDKSI 420
Query: 320 FTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILK 379
+ K E++ I +T LI+I +V + L++ K+ K T + E +
Sbjct: 421 YQKEARSGSEVIVS-EIFGDTTGDLINIYKVE-KFLEKSKIAYKIDTYMEKEEGLD---- 474
Query: 380 IIFRDKGTAHSAYYRVHVREADANAAD-------VLKGKASRTLSWWCFNPGIAMQEFSR 432
F K ++ + + AN +D V K K + + + +P ++
Sbjct: 475 --FTKKSSSPLLFKITKFLKCLANPSDEGRFFWNVTKDKTA--IDYLLLDPSEIFRDIVS 530
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPL-------RVENPHVITSKQIWAGIVPVGPSG 485
+ +IL GT+ P D F + L FP + H+I K + + P+G G
Sbjct: 531 -KCRCLILCGGTMEPTDDFKKYL---FPYVPSQSIKKFSCDHIIPDKNLI--VFPIGKYG 584
Query: 486 Y-LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNL 544
+ SY R + LGN I I G ++FFPSY +++ A W+ +HG L
Sbjct: 585 NSVFEFSYEKRSDLNMILNLGNAINGICEKTKGGAVVFFPSYRYLNEVKAHWQ--THGIL 642
Query: 545 TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
+I R + EP S+ + Y + ++ A+ FAV GK+SEG++FAD
Sbjct: 643 RSIENR----RTVYYEPTDSADVTQILNSYRTSI-ESDNGLAILFAVVGGKLSEGINFAD 697
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
RAV++ GMP+ T + ++E+++ + G K+ K ++ + +Y+ RA
Sbjct: 698 DLARAVIMVGMPYPNSTSADLIARKEFIEKTVLEENGSVKDAK---IASKIFYDNLCMRA 754
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK-----FGDVVYTL 719
VNQ++GR IRH+ D I D+R+ + S +S++S W++ + Y+K F V+
Sbjct: 755 VNQSIGRSIRHKDDSSLIYLIDQRYGYESVQSKLSGWVKKRL--YNKNSCTYFNKVLEET 812
Query: 720 TRFF 723
TRF+
Sbjct: 813 TRFY 816
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
PFE YD QL M + ++ N + ESPTGTGKTL ++C+T+ W ++
Sbjct: 18 PFEPYDIQLELMRSIYDAIDNYKIGIFESPTGTGKTLSIICSTMTWLRN 66
>gi|297743271|emb|CBI36138.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 186/717 (25%), Positives = 307/717 (42%), Gaps = 137/717 (19%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ-NNAC--- 150
I + SRTHSQL Q ++EL+ + + K+V LGSR+ CI+ EV L S + N C
Sbjct: 150 IYFCSRTHSQLSQFVKELRKTIFGNEMKVVCLGSRKISCINEEVLKLGNSTRINERCLEL 209
Query: 151 -----------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDE---------PIDIEDLVN 190
+ L +G RR S M N L + +DIEDLV+
Sbjct: 210 QQNKKKEVSKLKNLGSEGRIRRTKASSGCP--MLRNHKLQKQFRSEISQEGALDIEDLVH 267
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+GR G CPY+ +R + D+V PY L+ R+ LG+ KN+I+I DEAHNL
Sbjct: 268 LGRRMGTCPYYGSRSIIPAADLVVLPYQSLLSKSSRESLGLNLKNNIVIIDEAHNLADSL 327
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAE 310
++S L S K + Q L P N ++ LL+ + + +
Sbjct: 328 ISMYDAKITSSQLEHVHSHIKQYL--------QRFRNFLGPGNRRYIQTLLV-VTRAFLQ 378
Query: 311 VPINSKELGFTKPGP----------------YIYELLADLNITQETAYKLIDIVEVA--- 351
+ +N K+ PG I + L LNI KL+ ++ +
Sbjct: 379 ILLNGKDTSLVDPGHDAEKAFGAKSASDSSMAINDFLFSLNIDNINLVKLLHYIKESNII 438
Query: 352 ---------------AELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVH 396
L + N++ +T + ++L+ + + G R
Sbjct: 439 HKVSGYGDKVAYLRKGSALNDGGESNEEGSTLSGFRAFVDMLQSLTNNDGDGKIIISR-- 496
Query: 397 VREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQE 454
A G+ L + + FS + + ++IL GTL P++ +
Sbjct: 497 -------AKQACSGQQGGYLKYVMLT---GEKIFSEIVDQAHAVILAGGTLQPIEETRER 546
Query: 455 LKLNFPLRVEN-------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNT 507
L FP + H+I + I + GPSG + SY +R S +ELG
Sbjct: 547 L---FPWLTSDQFHFFSCSHIIPPESILPVALSHGPSGQSFDFSYSSRSSSIMIEELGLL 603
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLF 567
+ N+ +VP+G+++FF S+ Q WK + I ERI K K EPR+++
Sbjct: 604 LCNLVTVVPEGIVVFFSSFDYEGQVHDAWKASG------ILERIMKKKCVFREPRKNTDV 657
Query: 568 PLAIEDYMAKLKDTS----------TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
+++Y + +S +GA+ AV GK+SEG++F+D GR +V+ G+P+
Sbjct: 658 EFVLKEYKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLPY 717
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
+ +D ++ + +Y++ G+++Y +AVNQ++GR IRH +
Sbjct: 718 PSPSDIELLERVKYIEGLGH--------------RGKEYYENLCMKAVNQSIGRAIRHIN 763
Query: 678 DYGAIIFCDER---------FAHPSRKSQISLWIQP-HIQCYSKFGDVVYTLTRFFR 724
DY AI+ D R F+HP+ K + WI+ + K+G+ L +FF+
Sbjct: 764 DYAAILLVDARYASDPLKRSFSHPTNK--LPQWIKDCLVPVTGKYGEAHRLLHQFFK 818
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+E Y Q+ +M+ + +SL ++LESPTGTGKTL ++C+ L W
Sbjct: 12 FPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQW 58
>gi|169625336|ref|XP_001806072.1| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
gi|160705637|gb|EAT76778.2| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
Length = 1396
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 189/725 (26%), Positives = 313/725 (43%), Gaps = 92/725 (12%)
Query: 64 GSFSTLGSQVNNQISGSQ--SSVNSSQSGDSKLPT---ILYTSRTHSQLRQVIQELKTSN 118
G FS G Q Q S +++++ + ++P I + SRTHSQL Q EL
Sbjct: 165 GGFSESGLSAETQALMEQLGYSTSATKAEEGEVPDETKIFFCSRTHSQLTQFTSELGRVK 224
Query: 119 YRP------------------KMVILGSREQLCIHREVSLL-RGSAQNNACRFLCKKGTN 159
P K + LGSR+ LCI+ +VS L +A N C L + +
Sbjct: 225 MPPAITPDDQDADVDRLVDDVKHLTLGSRKNLCINSKVSRLGNATAINERCVELQQATSA 284
Query: 160 R-RCNHH-SRVADYMKNN--PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFA 215
+C H ++ ++ + N+ H + DIEDL +G+ G CPY+ +R
Sbjct: 285 EGKCPHMPNKESETLVNDFRDHALAKIRDIEDLGALGKKLGVCPYYASR----------- 333
Query: 216 PYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID 275
P + R LG+ KN ++I DEAHNL + A A + +S L + A+ +
Sbjct: 334 PAIQHCESTARDALGLSLKNHVVIIDEAHNL--MDAIAGIYSVSVTLDQVQQARAQLTMY 391
Query: 276 ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLN 335
+ R L N + + L+ + + S + T + +++
Sbjct: 392 LQKFR------NKLKGKNRVYVAQTVRILDSILGYLKTISDDKKATDGLVDMLTIMSGKG 445
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNIL-----KIIFRDKGTAHS 390
+ Q +KL LQE +L K E+++N K +F+ K +
Sbjct: 446 VDQVNIFKL-------NTYLQESRLARKVDGYTTYAETVANDTAKVGAKTMFQ-KAPRQN 497
Query: 391 AYYRVHVRE-----ADANAADVL---KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTS 442
+HV+ + +A K + TL + +P ++ E +++L
Sbjct: 498 VPVLMHVQSFLLSLMNPSAEGRFFYSKEDSCVTLRYMLLDPTYHFKDIVE-EARAVVLAG 556
Query: 443 GTLSPMDSFAQELKLNFP----LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
GT+SPM + Q L + + HVI + A V SG ++ NR+
Sbjct: 557 GTMSPMSDYEQHLLPYLDSTKIMTLSCGHVIPPTNLLAIPVVRASSGNEFVFTFENRNKE 616
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN-TSHGNLTTIWERICKHKKP 557
+LG+ I+ A+ +PDG+++FFPSY +D CIA WK + G+ T W+R + K
Sbjct: 617 RTMIDLGHAILGTAQHIPDGVVVFFPSYSYLDACIAAWKRLAAAGSKVTFWDRFTQTKPI 676
Query: 558 VVEPRQS---SLFPLA---------IEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
+E R + P+A + Y + + GA+ FAV G +SEG++F+D
Sbjct: 677 FLEQRSQPNVATQPVANKEAAVDSVLTAYSTAIASGNGCGALLFAVIGGTLSEGINFSDA 736
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
GR VV+ G+PF + K +Y+ + +GG+ K + D++ RAV
Sbjct: 737 LGRGVVVVGLPFPNPHSAGWKAKMQYISTKENKRGGDGKA------AARDFFENACMRAV 790
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
NQ VGR IRH+ DY AI+ D R+ + ++ WI+ + DV L +FF
Sbjct: 791 NQCVGRAIRHKGDYAAIMMLDRRYGTKRIQDKLPKWIRGSLTSGLGVTDVENQLDQFFAG 850
Query: 726 ERICG 730
+ + G
Sbjct: 851 KGVSG 855
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
P+E YD Q +M V L + ESPTGTGK+L L+C +L W +
Sbjct: 13 PYEPYDIQNDFMNAVYDCLDAGKVGIFESPTGTGKSLSLICGSLTWLR 60
>gi|255710557|ref|XP_002551562.1| KLTH0A02376p [Lachancea thermotolerans]
gi|238932939|emb|CAR21120.1| KLTH0A02376p [Lachancea thermotolerans CBS 6340]
Length = 821
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 180/652 (27%), Positives = 298/652 (45%), Gaps = 92/652 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP----------KMVILGSREQLCIHREVSLLRGSAQ 146
I Y SRTHSQL Q+ +L+ N+ P K V L SR+QLCI+ +VS
Sbjct: 213 IFYASRTHSQLGQLASQLRLPNFPPSFESMEHERVKFVPLASRKQLCINPKVSKTSSQVI 272
Query: 147 NNACRFLCKKGTNRRCNHHSRVAD---YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMT 203
N+ CR K + C ++R D H DIED+V++GR CPY+
Sbjct: 273 NDYCRDAVSK---KECVPYTRSKDPEILHAFRDHAFYAIHDIEDMVSLGRATSTCPYYAL 329
Query: 204 REL-QKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
REL V++V PY +L+ R+ LGV+ K+SI+I DEAHNL D + +
Sbjct: 330 RELLHDGVEVVTLPYQHLLVESTREALGVDLKDSIVIIDEAHNL---------IDTINAV 380
Query: 263 LTACISEAKNCIDISSTRRGQSSDET-----LNPDNFAILRALLLKLEKRIAEVPINSKE 317
+A +S A D+ S++ G + E L+P N L+ LL +E I + N K
Sbjct: 381 NSAEVSLA----DLQSSKLGITMYENKFAKRLSPHNRVNLKRLLTLVEVLIVFLQQNYKN 436
Query: 318 LGFTKPGPYIYE-LLAD-LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESIS 375
G ++E AD LNI + Y + ++A ++ K QN+ + TA +E
Sbjct: 437 -GKEFESHEVFEGTNADVLNIHKLEQY--MKTTKIAYKIDSYIKSQNESAETAA-VERQP 492
Query: 376 NILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEV 435
+ K+ +++ + + KGK + + P + +
Sbjct: 493 VLFKV---------ASFLKTLSNPSLEGQFFFEKGK---VMKYMLLEPSNSFKSIVH-AA 539
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENP-------HVITSKQIWAGIVPVGPSGYLL 488
++L GT+ P+ F ++L P EN HVI + IV G
Sbjct: 540 RCVLLAGGTMEPISDFTRDL---IPFVDENQINKFACNHVIPDNNLNTFIVTEG-----F 591
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH-----GN 543
+Y R+ +L + + +IVPDG+++F PSY ++ + W +T GN
Sbjct: 592 EFTYDKREDSRTLSDLYDFFSRLVKIVPDGVVVFLPSYKFLESLMRFWNSTCKVGACIGN 651
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
+E K + +F E+ + KL T GA+ FAV G++SEG++F
Sbjct: 652 KKIFYESADK----------ADVFAKYAEE-VRKL----TGGAILFAVVGGRLSEGINFQ 696
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
+ RAVV+ G+P+ + ++ +KR++L+ + G ++ K + ++Y +
Sbjct: 697 NELARAVVMVGLPYPNLFSGELIIKRKHLEQKVLKANGSSQDAK---RATREFYENICMK 753
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDV 715
AVNQ++GR IRH DY I D+R++ ++++S W+ I+ + D+
Sbjct: 754 AVNQSIGRAIRHAQDYANIYLVDKRYSSIQVQTKLSNWVAKRIRHTTSLDDL 805
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSLQN-KCNALLESPTGTGKTLCLLCATLAW-RKSLGSFSTLGS 71
PF+ YD QL M +V +L++ K + ESPTGTGKTL L+C T+ W R++ +
Sbjct: 10 PFQPYDIQLQLMHQVYNTLESGKKIGIFESPTGTGKTLSLICPTVTWLRRNKAHYMGKSK 69
Query: 72 QVNNQISGS 80
+ ++ + G+
Sbjct: 70 ETSSSVDGN 78
>gi|403341333|gb|EJY69968.1| Regulator of telomere elongation helicase 1 [Oxytricha trifallax]
Length = 1216
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 205/408 (50%), Gaps = 42/408 (10%)
Query: 319 GFTKPGPYIYELLADLNIT---QETAYKLIDIVEVAAELLQ------EDKLQNKKSTTAC 369
GF G Y L D N+T ++ +++ I + ELL+ D + K+ +
Sbjct: 748 GFN-AGDLYYNELKDKNLTDKERKQRARVLMINKRVDELLEVLDQCIADMQSDSKALSKL 806
Query: 370 R--IESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKA----SRTLSWWCFNP 423
+ ++++ ++ KI R++ +R+++ E A + G+A + L + C NP
Sbjct: 807 KNSLKTVQHLSKITERERQD-----FRLYIEEVTYIANKNVPGRAFEASKKLLGYICLNP 861
Query: 424 GIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGP 483
++ + SIILTSGTLSPMDSFA EL+ F +++EN H I Q+ +V
Sbjct: 862 SYIFKQLVKKNPRSIILTSGTLSPMDSFADELRTVFGVQLENQHAIDKSQLMVSVVQCDF 921
Query: 484 SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGN 543
+ + N Y R + + LG I + + +P G+L+FFPSY LM + ++ W
Sbjct: 922 NQHQFNFVYDRRKNYDQIIGLGKFIQKLEKNIPGGILLFFPSYELMAEIMSIWDQQQILY 981
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
++ E + F + Y+ ++ A+ VCRGK+SEG+DF
Sbjct: 982 QRQQFK----------EAKNGKEFKEIFDKYLKCIQ--RGKRAMLMCVCRGKLSEGIDFI 1029
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
D A RA+ + G+P+ + DP+V K+EYLD ++KE + G WY QASR
Sbjct: 1030 DDAARAIFVIGIPYPCVNDPRVVQKQEYLD-------QKHKEEPNFEIDGGKWYKLQASR 1082
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
VNQA+GRVIRH D+GA+ CDER+ + +IS W++ + Y K
Sbjct: 1083 TVNQAIGRVIRHIRDFGAVFLCDERYG--GQMVEISKWMKDRRRIYDK 1128
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 115/268 (42%), Gaps = 46/268 (17%)
Query: 113 ELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFL---CKKGTNRRCNHHSRVA 169
E + N R +M I E+L + E ++ + N R K+ + R H S V
Sbjct: 427 EDEKKNQRKRMDIRQQEEKLRQYEETIFVQNIIETNTTRNKKQNAKEFDDMRRKHQSGVC 486
Query: 170 DY------------MKNNPHLGD-------EPI-DIEDLVNIGRTFGPCPYFMTRELQKT 209
Y + NP +P+ DIEDL +G+ CPY++ R
Sbjct: 487 PYYNGGEKRIFETELNVNPFFEKMQQKILTQPVYDIEDLNKVGKMHSLCPYYLARSKLSN 546
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTAC--- 266
VDI PY+Y++ P R+ L ++ +NS++IFDEAHNLE IC + SF LS L C
Sbjct: 547 VDIAVIPYHYILTPSIRRKLPLKIENSVIIFDEAHNLERICEEIMSFKLSVDKLIQCEKI 606
Query: 267 -----------ISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
S + N + ++ + G DET ILR + L + I P
Sbjct: 607 LQKLETVYREKDSMSANVTNQNNDKAGDKLDET------EILRCFIDHLRRAIDIKPNMR 660
Query: 316 KELGFTKPGP---YIYELLADLNITQET 340
K +G + G Y++++ NI E
Sbjct: 661 KHVGEMERGNIKYYLFDIQEVHNILDEA 688
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 82/175 (46%), Gaps = 46/175 (26%)
Query: 9 IDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS----- 62
I V FP+E Y CQ Y++ ++++L+ K NALLESPTGTGKTLCLL TL + K+
Sbjct: 175 IQVHFPYEKPYQCQENYIKSLVKALRKKQNALLESPTGTGKTLCLLSGTLGFLKAYSDNP 234
Query: 63 --LGSFSTLGS--------------------------QVNNQISGSQSSVNSSQSGD--- 91
F G ++ Q + +Q SSQ +
Sbjct: 235 SIFDEFDENGKPLKHINSSQPDEPDEEFALDNPDAAIELQKQKTQNQDERVSSQQDNEEA 294
Query: 92 --------SKLPTILYTSRTHSQLRQVIQELKTS-NYRPKMVILGSREQLCIHRE 137
K ++Y +RTHSQ+ QVI+E+K Y +V L SR+ +CI E
Sbjct: 295 GKKNYLNQDKRIMVIYCTRTHSQISQVIKEIKNKLAYEINVVPLASRKHMCIFGE 349
>gi|452822263|gb|EME29284.1| putative DNA helicase required for mitotic chromosome segregation
CHL1 [Galdieria sulphuraria]
Length = 984
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 173/313 (55%), Gaps = 26/313 (8%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGS--IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK- 472
L WCFNP ++ FS L+ S I+L+SGTL+PMDSF+ EL ++F + PHVI K
Sbjct: 488 LCLWCFNPAVS---FSYLQSHSRCIVLSSGTLTPMDSFSSELGIHFDIMNSLPHVIDVKN 544
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
Q+ A GP+ +S++ SI Y LG +I+ R++PDG++ FFPSY L++
Sbjct: 545 QVCAIASSCGPNSVDYDSTFAASSSIAYHDCLGQSILEYCRVIPDGVICFFPSYRLLESV 604
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSS--LFPLAIEDYMAKLKDTSTSGAVFFA 590
+ W+ + + W+ + K+ +EP Q+ F + Y + GA+F A
Sbjct: 605 VRRWRQSGY------WKELESCKQVFIEPCQNDRVYFDNILLSYYHAIH--KKQGALFLA 656
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
VCRGKVSEG+DF D R V+I G+P+ + D +V K+EY D + S+
Sbjct: 657 VCRGKVSEGIDFKDEYARGVIIVGLPYPNLRDLQVIQKKEYNDRYSASR---------KL 707
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS 710
L+G+ WY QA R++NQA+GR IRH++DYG I+ D+R+ + W+ I+ +
Sbjct: 708 LNGQRWYALQAFRSLNQAIGRCIRHKNDYGVIVLLDKRYTRHETLRNLPKWLAHQIRI-A 766
Query: 711 KFGDVVYTLTRFF 723
+ +V ++ F
Sbjct: 767 TYHEVAISMISHF 779
Score = 149 bits (377), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 128/204 (62%), Gaps = 11/204 (5%)
Query: 59 WRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSN 118
+++ +G+ T+ S ++ I+ + + N + P I + +RTH+Q+ QV+QEL+ ++
Sbjct: 130 FQQGIGTNQTIDSDSDDWITHDEDN-NLDSDKEIIPPKIFFATRTHTQIDQVVQELRRTS 188
Query: 119 YRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHL 178
YRPKM ILGSR++ CIH +V +R +N C+ L ++ R C++ V + + N L
Sbjct: 189 YRPKMDILGSRDRYCIHNKV--IRSQNRNEECKKLLEE---RSCSYAFGV-EKVHNIKEL 242
Query: 179 GDEPI----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
+ I DIEDLV IG+ CPYF ++EL KT +++F PY+YL+DP R + VE
Sbjct: 243 SENHIHQVWDIEDLVRIGKRHNLCPYFSSQELMKTAELIFCPYSYLLDPVVRNAMQVELS 302
Query: 235 NSILIFDEAHNLEGICADAASFDL 258
NSI+I DEAHN+E +C +AAS ++
Sbjct: 303 NSIVILDEAHNIEDVCREAASCEV 326
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP +++ G ++EFP+E Y Q V+MEK++++ +N NALLESPTGTGK+L LLCA LAW+
Sbjct: 1 MP-FQVYGTEIEFPYEPYPVQFVFMEKILRACENSQNALLESPTGTGKSLALLCAVLAWQ 59
Query: 61 K 61
K
Sbjct: 60 K 60
>gi|391337516|ref|XP_003743113.1| PREDICTED: Fanconi anemia group J protein-like [Metaseiulus
occidentalis]
Length = 567
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 264/564 (46%), Gaps = 94/564 (16%)
Query: 3 TYKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW-- 59
++ + G+ V FP+E Y Q V M ++I +L+ K N LLESPTGTGK+L LLCA LA+
Sbjct: 13 SHPLGGLKVLFPYENPYPQQKVMMSRLITALKQKKNCLLESPTGTGKSLSLLCAALAFCE 72
Query: 60 ------RKSLGSF-------------STLGSQV------------------NNQISGSQS 82
RK L F S L ++ N S S
Sbjct: 73 DEKRKHRKGLEKFPDGLPPKAEESSHSLLEPELPKTKSVMDMYDDECVKPHNESASKSLL 132
Query: 83 SVNSSQSGDS----KLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHRE 137
+ S + + K P I Y +RTH Q+ QV+ E + + Y KM ILGSRE++C+ R+
Sbjct: 133 NEKSPHAPEGVRILKAPKIFYGTRTHRQVSQVVNEFRRTGYHNMKMTILGSRERMCVSRK 192
Query: 138 V------------SLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDI 185
+ + S + CRFL + ++ N +S Y + EP DI
Sbjct: 193 AIESVHGISEECRNFRKESKKGLGCRFLHRL---QKINRYS----YPTSMEGGKTEPWDI 245
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHN 245
ED+V +G+ CPY+ + +L + DIVF PYNY++DP R + ++ +N+I+I DEAHN
Sbjct: 246 EDIVTVGKRHTLCPYYWSIQLAEDADIVFCPYNYILDPRIRAAVDIQVENNIVILDEAHN 305
Query: 246 LEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLE 305
+E IC DA ++ + I ++ I+ S +++ LR LLL
Sbjct: 306 IEDICRDAMGMEIK----LSDILHIEDFIENSVKNHKETAALMQMSPAIGALRHLLL--- 358
Query: 306 KRIAEVPINS-KELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK 364
A+VP+ ++L + + +LL + T + + E+ +LL E +
Sbjct: 359 NEAADVPLQEPRKLSTAQ----LCQLLEAAGLGPTTWPR---VSEILGQLLNESIEEGGG 411
Query: 365 STTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADV-----------LKGKAS 413
R+ + +I F Y+++ + D V LKG
Sbjct: 412 EVADERL--LDTRSRIFFDALCGTGGHMYKMNGKFLDCFRGAVSKKIAKEFQKELKGSPE 469
Query: 414 RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
TL +C NP +A+ + R ++ S+++ SGTLSPM SF EL + FP + HV+ +Q
Sbjct: 470 ITLQIFCLNPAVALVDI-RDKLHSLVVASGTLSPMKSFECELGIPFPFSLSLNHVVREEQ 528
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDS 497
+ A ++ GP G ++S +++R S
Sbjct: 529 MLACVLAKGPKGS-VSSIFKSRSS 551
>gi|449455724|ref|XP_004145601.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Cucumis sativus]
Length = 1027
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 244/506 (48%), Gaps = 59/506 (11%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSL-----QNKCNALLESPTGTGKTLCLLCATLA 58
Y I GI VEFPF Y QL +M++VI +L + C+ALLESPTGTGK+L LLC++LA
Sbjct: 25 YPIGGIQVEFPFRPYGSQLEFMDRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLA 84
Query: 59 WRKS-----------------------LGSFSTLGSQVNNQISGSQSSV---NSSQSGDS 92
W+K+ LG +V Q ++SS+ N+
Sbjct: 85 WQKNYKIKNPDANPCHTKAAPEAATDPLGFGGGFIPEV--QTPNTESSLPGPNNKSQKKK 142
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQ-NNACR 151
PTI Y SRTHSQ+ QVI+E + + YR M +L SR+ LC + V RG + C+
Sbjct: 143 TAPTIYYASRTHSQISQVIREYRKTAYRVPMAVLASRKHLCTNPYV---RGKDNLDEECK 199
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGD----EPIDIEDLVNIGRTFGPCPYFMTRELQ 207
L K C+ + A+ +K +P L E DIEDLV +G C Y+ R +
Sbjct: 200 LLLKDQI-AGCSEF-KNANKVKCHPTLQKGGCHEVHDIEDLVKVGEAVKGCSYYAARSMA 257
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
+VF PY+Y+I+P R + V+ K +I+IFDEAHN+E I S D+ L
Sbjct: 258 DDAQLVFCPYSYIINPVIRGAMDVDIKGAIVIFDEAHNIEDIARHGGSVDIEEDTLNKLQ 317
Query: 268 SEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYI 327
E ++ I S + T + ++ R L+ + V + G +
Sbjct: 318 MELEDLCPIDSLVYQPLYEMTQDLTSWIDQRKTTLQKREFQHYVTCWT--------GNHA 369
Query: 328 YELLADLNITQETAYKLIDI----VEVAAELLQEDKLQNKKSTTACRIESISNILKIIFR 383
L + NITQ+ L++ ++ A++ +D + + +E + + L F
Sbjct: 370 QRELQEANITQQCFPILLECATKAIKAASDTESDDA--HLSGLSVITLEGLFSSLTYFFS 427
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSG 443
G H + Y++ ++ + + TLS WC NP + ++ L + S+ILTSG
Sbjct: 428 RNG-CHMSDYQLALQRYTKRDPGKAYAEWTVTLSLWCLNPAVVFRDIGDLSL-SVILTSG 485
Query: 444 TLSPMDSFAQELKLNFPLRVENPHVI 469
TLSPM+SF+ EL + F +E PHVI
Sbjct: 486 TLSPMNSFSSELGVQFGTSLEAPHVI 511
>gi|328855625|gb|EGG04750.1| hypothetical protein MELLADRAFT_108080 [Melampsora larici-populina
98AG31]
Length = 795
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 188/766 (24%), Positives = 333/766 (43%), Gaps = 120/766 (15%)
Query: 4 YKIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I +++ FP++ Y Q M + ++L + +LE P+GTGKT+ LL +A+
Sbjct: 3 FNIDDLEIIFPYDKIYPEQ---MSDLKRTLDVGGHCVLEMPSGTGKTISLLSLIVAY--- 56
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
Q + ++Y SRT ++ + + ELK YR
Sbjct: 57 -------------------------QQNHPEKRKLVYCSRTVPEIEKALIELKRLMAYRA 91
Query: 122 KM--------------------VILGSREQLCIHREVSL-LRGSAQNNACRFL-----CK 155
+ L SR+ LCIH +VS +G + CR L C+
Sbjct: 92 SQLRLRAELTNAGPIEDEDFLGIGLTSRKNLCIHPDVSREKKGKVVDARCRDLTSAWACE 151
Query: 156 KGTNR-----RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
+G C H ++ + ++ + +E++ N G G CPYF R +
Sbjct: 152 QGRANPGSVPLCEFHEKLGE-LEAGDLIPRGVWTLEEITNYGHQQGICPYFAVRRMLAYA 210
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWK-NSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
D+V ++YL+DP + E NSI++FDEAHN++ +C ++ S DL+ +L
Sbjct: 211 DVVIYSFHYLLDPKVATQVSKEISPNSIVVFDEAHNIDNVCIESLSIDLNKSILDNAGRA 270
Query: 270 AKNC-IDISSTRRGQSSDETLNPDNFAILRALL------LKLEKRIAEVPINSKEL---- 318
+N + I +R +S L + ++R L + E + P+ +L
Sbjct: 271 IENLEVKIQEIKRTDAS--KLQNEYQRLVRGLQGSELEQAEDEAGVIATPVLPDDLLQEA 328
Query: 319 --GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--R 370
G + + L +T +++ +V E LQ K ++K C R
Sbjct: 329 IPGNIRRAEHFTAFLTRFVEYLKTRMRVLHVVAETPLSFLQHLKDLTFIDRKPLRFCSER 388
Query: 371 IESISNILKIIFRDK--GTAHSAYYRVHVREADANAADVLKGKASR-------TLSWWCF 421
+ S+ L++ D+ G A + V + +L+ + C
Sbjct: 389 LTSLIRTLELTQLDQYNGLQQVASFATLVATYEKGFLLILEPFETENATVPNPVFHLTCL 448
Query: 422 NPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP 480
+ +A++ F R S+++TSGT+SP+D + + L ++ +T ++
Sbjct: 449 DASLAIKPVFDRF--SSVVITSGTISPLDMYPKMLGFESAVQESYSMTLTRNCFLPLVIT 506
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
G ++S + R+ + G +++ +IVPDG++ FFPSY M+ +A W +
Sbjct: 507 RGADQVAISSRFEVRNDPSVVRNFGTVLIDYCKIVPDGIVAFFPSYLYMESIVAAWHDM- 565
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
G L +W K+K VE + +A+E+Y + GAV +V RGKVSEG+
Sbjct: 566 -GILKEVW----KYKLIFVETPDAVETSIALENYRRACDN--GKGAVLLSVARGKVSEGI 618
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DF + GRAV++ G+P+ ++ + E+L + + +Y L+F
Sbjct: 619 DFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNYRIRENDY----LTF---------D 665
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGRV+R + DYG +IF D+RFA +++++ WI +I
Sbjct: 666 AMRHAAQCVGRVLRGKTDYGLMIFADKRFAKADKRAKLPKWINAYI 711
>gi|50293497|ref|XP_449160.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637307|sp|Q6FKT4.1|CHL1_CANGA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49528473|emb|CAG62130.1| unnamed protein product [Candida glabrata]
Length = 830
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 176/662 (26%), Positives = 312/662 (47%), Gaps = 81/662 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY-----------RPKMVILGSREQLCIHREVSLLRG-S 144
I ++SRTHSQL Q ++LK +N+ R K + LGS++QLCI+ +V +
Sbjct: 213 IFFSSRTHSQLNQFAEQLKLTNFPSSFPDKVAHERVKYMPLGSKKQLCINPDVKKWKTLE 272
Query: 145 AQNNACRFL------CKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPC 198
N+AC + C N H+S+ ++ ++ + + DIED+ +G + C
Sbjct: 273 GINDACSEVRRSKEGCPFYQNTPKWHNSKETNHFRD--QVFSDIHDIEDIAKVGESLAVC 330
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
PY+ R+ + +IV PY YL+ R L ++ K SI++ DEAHNL S ++
Sbjct: 331 PYYAARDFIPSSEIVTLPYQYLLSESTRSQLRLDLKGSIVVIDEAHNLVDTINSIHSAEI 390
Query: 259 SSGLLTACISEAKNCID--ISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSK 316
S +SE K + I ++ +S LNP N R LLKL K I V IN
Sbjct: 391 S-------LSELKQSYNSIILYMKKFKSR---LNPGN----RVNLLKLSKLIT-VLINFI 435
Query: 317 ELGFTKPGPYI--YELLADLNITQETAYKLIDIVEVAAELLQED----KLQNKKSTTACR 370
+ KPG + + +L N ++++ ++ + + D KLQ K+S + +
Sbjct: 436 TTHYKKPGLEVDAFSILESNNTDMLNVHRVLKYIKTSHIAYKLDTYIQKLQEKESPSNQK 495
Query: 371 IESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEF 430
S + KI S + + + +G + R + P Q+
Sbjct: 496 PSSQPLLYKI---------SKFLECLNNTSSEGSFFFERGPSLR---YMLLEPSRIFQDI 543
Query: 431 SRLEVGSIILTSGTLSPMDSFAQEL--KLNFP--LRVENPHVITSKQIWAGIVPVGPSGY 486
+IL GT+ P+ Q L KL+ + HVI + IV +
Sbjct: 544 ID-SARCVILAGGTMEPVSQLLQYLVPKLDDSSITKFSCNHVIPDSHLRTYIVNEPQFEF 602
Query: 487 LLNSSYRNRDSIEYKQ-ELGNTIVNIARIVPD--GLLIFFPSYYLMDQCIACWKNTSHGN 543
++ R+S+ Q L N + ++ +P G++ FFPSY +D+ I W+
Sbjct: 603 ----TFEKRNSVNLVQNHLFNFYLELSTTIPKTGGIIGFFPSYKYLDEIIVSWRKAG--- 655
Query: 544 LTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFA 603
++E++ K +K E + P + DY + + ++ GA+ FA+ GK+SEG++F
Sbjct: 656 ---LFEKLDKERKVFYEMKDG---PDPLPDYTSAV--ANSEGAILFAIVGGKLSEGINFG 707
Query: 604 DHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASR 663
+ RA+V+TG+P+ + ++ + R++L+ + + GG + ++ ++++ +
Sbjct: 708 GNLCRAIVMTGLPYPNVFSGELIISRKHLEEKVLNGGGSKTDANMA---AKEFFENICMK 764
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
AVNQ+VGR IR +DY I D+R+A+ + +S++S W++ IQ S DV+ + FF
Sbjct: 765 AVNQSVGRSIRSINDYSLIYLLDKRYANANIQSKLSQWVRSRIQSVSTVRDVMASSKEFF 824
Query: 724 RE 725
+
Sbjct: 825 DQ 826
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 14 PFEAYDCQLVYMEKVIQSLQN--KCNALLESPTGTGKTLCLLCATLAWRKS-----LGSF 66
P+ YD QL M+ V +L N K A++ESPTGTGKTL L+C+TL W + L S
Sbjct: 10 PYSPYDIQLDLMQCVYDTLANPVKKVAIVESPTGTGKTLSLICSTLTWLRDNKADILSSV 69
Query: 67 STLGS 71
TL S
Sbjct: 70 DTLHS 74
>gi|425778625|gb|EKV16743.1| hypothetical protein PDIG_19320 [Penicillium digitatum PHI26]
gi|425784169|gb|EKV21962.1| hypothetical protein PDIP_01290 [Penicillium digitatum Pd1]
Length = 974
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 171/637 (26%), Positives = 281/637 (44%), Gaps = 63/637 (9%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------------------RPKMVILGSREQLCIH 135
I + SRTHSQL Q EL+ R K + LGSR+ LCI+
Sbjct: 195 IFFCSRTHSQLSQFAGELRRVTLPSSLPSDLDPESKDDLSKLEERVKHLSLGSRKNLCIN 254
Query: 136 REVSLLRGSAQ-NNACRFLCKKG--TNRRCNH---HSRVADYMKNNPHLGDEPIDIEDLV 189
+V L + + N C L + G +++C+ A ++ H DIED+
Sbjct: 255 PKVRALANNTEINEKCLDLQQAGLAADKKCSFIPSKDNEALALEFRDHALATVKDIEDIA 314
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGI 249
+G+ G CPY+ +R + K +IV PY L+ R+ L + K I+I DEAHNL
Sbjct: 315 QVGKKLGICPYYASRPVIKHSEIVTLPYQLLLQRSAREALNISVKGHIVIIDEAHNLMDA 374
Query: 250 CADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA 309
S +S L I + + R+ ++ + N + A + L+ + + +
Sbjct: 375 ITGIHSVTVSLNQLRTAIGQL-----TTYARKFKNKLKGKNRNYVAQVIRLVSSIAEHME 429
Query: 310 EVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTAC 369
+ S++ G + +L+ + Q YKL + LQE KL K
Sbjct: 430 SI---SQQNGPLEGSVQTSDLMTGKGVDQINPYKL-------SRYLQESKLARK---VDG 476
Query: 370 RIESISNILKIIFRDKGTAHSAYYRVHVREADANAAD-----VLKGKASRTLSWWCFNPG 424
+ES +DK T ++ N ++ K + L + +P
Sbjct: 477 YLESSQQPQPDRPKDKTTVPVLFHIQSFLLPLMNPSEEGRLFFQKSQEDVLLKYMLLDPT 536
Query: 425 IAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR----VENPHVITSKQIWAGIVP 480
+E + + ++IL GT+SPM + L P HVI + A +
Sbjct: 537 NHFREIAE-DARAVILAGGTMSPMSDYVNYLFSYLPPERLGTFSYGHVIPKSNLVAQSLT 595
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN-T 539
G G + +Y R+S +LG T+ + +++PDG++ FFPSY + + WK
Sbjct: 596 QGLMGNEFDFTYEARNSERMITDLGRTMATLCQVIPDGVVAFFPSYDYLSHVLGVWKKPI 655
Query: 540 SHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVFFAVCRGKVS 597
+GN + + + KK + E R++ +D + + + S SGA+ ++ GK+S
Sbjct: 656 PNGNGQSTLNLLERKKKIIYESREAMT---TTDDLLREYTEAVQSGSGALLLSIVGGKLS 712
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QSQGGEYKETKLSFLSGED 655
EG++F+D+ GR V I G+PF + P + K +YL+ + Q+ G E + + +G D
Sbjct: 713 EGINFSDNLGRGVFIIGLPFPNIRSPVWQAKIQYLEEKTYKQASGSEPERKAVGKAAGRD 772
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHP 692
+Y RAVNQ +GR IRH +DY AII D R P
Sbjct: 773 FYENSCMRAVNQCIGRAIRHINDYAAIIMIDRRRNDP 809
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
+D P+ Y+ QL +M+ + L++ A+ ESPTGTGK+L L+C +L W
Sbjct: 1 MDFHHPYTPYEIQLQFMQALYACLEDGKIAVFESPTGTGKSLSLICGSLTW 51
>gi|324502086|gb|ADY40918.1| Fanconi anemia group J protein [Ascaris suum]
Length = 962
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 177/318 (55%), Gaps = 27/318 (8%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
T ++WC P +A + + E S+IL SGTL PMD+F EL F +E VI S I
Sbjct: 641 TFNFWCMRPALAYLDAFK-ECRSVILASGTLCPMDTFRSELGTEFQQMMEGSQVIPSDHI 699
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIE-YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+A ++P GP+GY L +YRN +S + + +E+ + ++ IVP G+L F SY L+DQ
Sbjct: 700 FAAVIPSGPTGYPLCGTYRNINSDDRFVREISLLLKSVCEIVPKGVLCFLASYRLLDQIY 759
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----TSGAVF 588
+ I +I K+ + EPR+SS + Y + +++ +GA+
Sbjct: 760 EFMETAG------ILRQIQTIKRVLCEPRRSSQMNEIMAQYEEAITNSARYGPQCTGALM 813
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKL 648
FAV RGKVSEG+DFAD R VV G+PF D +V K+++ D + K+
Sbjct: 814 FAVFRGKVSEGIDFADDRARCVVSVGIPFPNAMDEQVSEKKKFNDDNCK---------KM 864
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF----AHPSRKSQISLWIQP 704
L+G++WY QA RA+NQA+GR +RHR D+GAI+ DER ++P+ +++S WI+
Sbjct: 865 RILTGDEWYTMQAYRALNQALGRCLRHRSDWGAILMVDERLLQRRSNPN-ATKVSKWIRE 923
Query: 705 HIQCYSKFGDVVYTLTRF 722
++ S + V L +F
Sbjct: 924 QLRPLSGYKHFVEELQQF 941
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 97/192 (50%), Gaps = 22/192 (11%)
Query: 87 SQSGDSKLP--TILYTSRTHSQLRQVIQELKTSNY----RPKMVILGSREQLCIHREVSL 140
S+ G + LP TI Y +RTH Q+ QV+ E Y + IL SRE CI+ V
Sbjct: 216 SREGHTCLPRVTIYYGTRTHKQISQVVGEFARLPYGHDGTIRHTILASREHSCINLAV-- 273
Query: 141 LRGSAQ-NNACRFL-------CKKGTNRRCNHH--SRVADYMKNNPHLGDEPIDIEDLVN 190
R S N C+ L C + R + V + N D+ DIEDLV+
Sbjct: 274 -RNSGDVNGKCKELISAAGVGCSYKNSMRGKYEKSGSVRKLVSQNLERSDDVWDIEDLVS 332
Query: 191 IGRTFGP--CPYFM-TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
+T P CPYF TR L + DIVF P++Y++DP R V KN+++I DEAHN+E
Sbjct: 333 ALKTSSPALCPYFSSTRVLTQDADIVFCPFSYMLDPIIRDNSDVTLKNAVVILDEAHNVE 392
Query: 248 GICADAASFDLS 259
+C +A SF +
Sbjct: 393 DVCREAVSFSFT 404
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 6 IRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
+ G+ V+ P Y Q M K++ SL+NK NAL+ESPTG+GKTL LL AT AW
Sbjct: 52 VGGLVVKLPPGLTPYTTQRTMMAKILMSLKNKLNALIESPTGSGKTLGLLSATCAW 107
>gi|255723968|ref|XP_002546913.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134804|gb|EER34358.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 812
Score = 199 bits (505), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 183/662 (27%), Positives = 307/662 (46%), Gaps = 82/662 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRGSAQ- 146
I Y+SRTHSQL Q +L+ +++ R K + LGSR+QLCI+ +V +G+ Q
Sbjct: 202 IFYSSRTHSQLNQFSSQLRLTHFEASFEELNERTKYIPLGSRKQLCINEKVRS-KGNDQS 260
Query: 147 -NNACRFLCKKGTNRRCNHHSRVADYMKNN--PHLGDEPI----DIEDLVNIGRTFGPCP 199
N+AC L + C + +YM +N D + DIEDL +G CP
Sbjct: 261 MNDACIDLQRNSNG--CEFLPK--NYMTSNVTKDFADLSLAKIRDIEDLGELGTELRICP 316
Query: 200 YFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
Y+ R + +I+ PY + R+ L ++ K++I+I DEAHN+ S ++
Sbjct: 317 YYSVRRGVELTEIISLPYQMIFQDTTRRILNLDVKDAIIIIDEAHNIIDTITSMYSLKIT 376
Query: 260 SGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELG 319
+ L I K + ++ + +S +N + LLLK +V
Sbjct: 377 ADQLNKVIKSLK--VYLNKFLKKLNSGNRINLLKLIKICQLLLKFLNNNQDV-------- 426
Query: 320 FTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILK 379
+PG E+ A+ +I +++ L++I ++ L KS A +IES I K
Sbjct: 427 --RPGD---EIKAE-DIFKDSTGDLVNIHKLDQFL--------SKSKIAYKIESY--IEK 470
Query: 380 IIFRDKGTAHSAYYRV-HVREADANAADV-----LKGKASRTLSWWCFNPGIAMQEFSRL 433
K ++ + V + ++ N + K S ++++ +P +E
Sbjct: 471 TENEYKSCSNPLLFTVINFLKSLTNLSQEGKFFWDKSNNSISINYMLLDPSAVFKEIVD- 529
Query: 434 EVGSIILTSGTLSPMDSFAQEL-------KLNFPLRVENPHVITSKQIWAGIVPVGP-SG 485
+ ++L GT+ PM + L K+N R HVI + + + PV
Sbjct: 530 QAKCVLLCGGTMEPMSDYVDYLFPSVSKEKIN---RFTCGHVIPKENL--EVFPVKQFKE 584
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
+ S+ R++ LG I+ I + VP GL+IFFPSY ++Q + WKN G L+
Sbjct: 585 FQFEFSFDKRNNPVQLNALGRFIIEICQRVPYGLVIFFPSYKYLNQVLESWKN---GILS 641
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
TI C +K EP S + Y A + +T GA+ F+V GK+SEG++F+D
Sbjct: 642 TIE---C-YKSVFQEPSDPSKVEFTLGQY-ASVINTERKGAILFSVVGGKMSEGINFSDD 696
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
RAVV+ G+P+ ++ K ++++ GG ++ K ++Y RAV
Sbjct: 697 LARAVVMVGLPYPNAYSGEMVAKMKFIETNVLQNGGTIQQAK---EKSRNYYENLCMRAV 753
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
NQ++GR IRH DY I D+RF +P +S++S W++ I + +++ T FF +
Sbjct: 754 NQSIGRSIRHIKDYSTIYLIDKRFEYPRIQSKLSQWVKQRINNNT---NIMEQTTEFFNK 810
Query: 726 ER 727
R
Sbjct: 811 IR 812
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAWRKSLGSFSTL 69
P+E YD Q+ M+ + ++ + L ESPTGTGKTL ++C+T+ W ++ +T
Sbjct: 13 PYEPYDIQVQLMDAIYHTIDDGYKIGLFESPTGTGKTLSIICSTMTWLRNYKKNNTF 69
>gi|225442629|ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Vitis
vinifera]
Length = 961
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 191/735 (25%), Positives = 318/735 (43%), Gaps = 141/735 (19%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ-NNAC--- 150
I + SRTHSQL Q ++EL+ + + K+V LGSR+ CI+ EV L S + N C
Sbjct: 253 IYFCSRTHSQLSQFVKELRKTIFGNEMKVVCLGSRKISCINEEVLKLGNSTRINERCLEL 312
Query: 151 -----------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDE---------PIDIEDLVN 190
+ L +G RR S M N L + +DIEDLV+
Sbjct: 313 QQNKKKEVSKLKNLGSEGRIRRTKASSGCP--MLRNHKLQKQFRSEISQEGALDIEDLVH 370
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+GR G CPY+ +R + D+V PY L+ R+ LG+ KN+I+I DEAHNL
Sbjct: 371 LGRRMGTCPYYGSRSIIPAADLVVLPYQSLLSKSSRESLGLNLKNNIVIIDEAHNLADSL 430
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAE 310
++S L S K + Q L P N ++ LL+ + + +
Sbjct: 431 ISMYDAKITSSQLEHVHSHIKQYL--------QRFRNFLGPGNRRYIQTLLV-VTRAFLQ 481
Query: 311 VPINSKELGFTKPGP----------------YIYELLADLNITQETAYKLIDIVEVA--- 351
+ +N K+ PG I + L LNI KL+ ++ +
Sbjct: 482 ILLNGKDTSLVDPGHDAEKAFGAKSASDSSMAINDFLFSLNIDNINLVKLLHYIKESNII 541
Query: 352 ---------------AELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVH 396
L + N++ +T + ++L+ + + G R
Sbjct: 542 HKVSGYGDKVAYLRKGSALNDGGESNEEGSTLSGFRAFVDMLQSLTNNDGDGKIIISR-- 599
Query: 397 VREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQE 454
A G+ L + + FS + + ++IL GTL P++ +
Sbjct: 600 -------AKQACSGQQGGYLKYVMLT---GEKIFSEIVDQAHAVILAGGTLQPIEETRER 649
Query: 455 LKLNFPLRVEN-------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNT 507
L FP + H+I + I + GPSG + SY +R S +ELG
Sbjct: 650 L---FPWLTSDQFHFFSCSHIIPPESILPVALSHGPSGQSFDFSYSSRSSSIMIEELGLL 706
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLF 567
+ N+ +VP+G+++FF S+ Q WK + I ERI K K EPR+++
Sbjct: 707 LCNLVTVVPEGIVVFFSSFDYEGQVHDAWKASG------ILERIMKKKCVFREPRKNTDV 760
Query: 568 PLAIEDYMAKLKDTS----------TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
+++Y + +S +GA+ AV GK+SEG++F+D GR +V+ G+P+
Sbjct: 761 EFVLKEYKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLPY 820
Query: 618 ATMTDPKVRLKREYLD-----LQAQSQ----GGEY--KETKLSF-------LSGEDWYNQ 659
+ +D ++ + +Y++ + ++S G EY + ++ F G+++Y
Sbjct: 821 PSPSDIELLERVKYIEGLGVSISSRSTKFSVGNEYFSGDVQVGFDILRSCKHRGKEYYEN 880
Query: 660 QASRAVNQAVGRVIRHRHDYGAIIFCDER---------FAHPSRKSQISLWIQP-HIQCY 709
+AVNQ++GR IRH +DY AI+ D R F+HP+ K + WI+ +
Sbjct: 881 LCMKAVNQSIGRAIRHINDYAAILLVDARYASDPLKRSFSHPTNK--LPQWIKDCLVPVT 938
Query: 710 SKFGDVVYTLTRFFR 724
K+G+ L +FF+
Sbjct: 939 GKYGEAHRLLHQFFK 953
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+E Y Q+ +M+ + +SL ++LESPTGTGKTL ++C+ L W
Sbjct: 76 FPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQW 122
>gi|452840050|gb|EME41988.1| hypothetical protein DOTSEDRAFT_72929 [Dothistroma septosporum
NZE10]
Length = 798
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 184/751 (24%), Positives = 325/751 (43%), Gaps = 111/751 (14%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FYIEDLPVLFPYPRIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK YR
Sbjct: 63 YPEARKL----------------------------IYCSRTMSEIEKALAELKALMKYRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + GS + CR L + C
Sbjct: 95 DQLGEVEDFRGLGLTSRKNLCLHPSVRREKSGSVVDARCRSLTAGFVKEKKERGEDVDLC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + ++ ++ G CPYF R + +++ Y+YL+D
Sbjct: 155 IYHDNL-DLLEPHNLIPPGVWTLDGMLQYGEQHKQCPYFTARRMMPFCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + + E K+ I++FDEAHN++ +C ++ S DL+ L A N ++ T
Sbjct: 214 PKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKAARGASN-LEQKITEM 272
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL----------GFTKPGPYIYELL 331
+ E L + ++ L + R +++ L G + + L
Sbjct: 273 KDTDAEKLQNEYAKLVEGLREADQARDEGAFMSNPALPDDLLKEAVPGNIRRAEHFTAFL 332
Query: 332 ADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKII---- 381
+T K++ ++ E LQ K KK C R+ S+ L++
Sbjct: 333 KRFIEYLKTRMKVLHVISETPPSFLQHLKELTFIEKKPLRFCAERLTSLVRTLELTNIED 392
Query: 382 ---------FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FS 431
F + + + + ++++A V A+ L + C + IA++ F
Sbjct: 393 YQPLQEVATFATLVATYDTGFLLILEPYESDSATV----ANPILHFTCLDAAIAIKPVFD 448
Query: 432 RLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
R S+I+TSGT+SP++ + + L ++ + + IV G ++S+
Sbjct: 449 RF--SSVIITSGTISPLEMYPKMLGFEAVVQESYAMTLARRSFLPMIVTRGADQAPISSN 506
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
++ R+ + G ++ +++ PDG+++FFPSY M+ I+ W+N G L +W
Sbjct: 507 FQRRNDPNVVKNYGQLLIKFSKLTPDGIVVFFPSYLYMESVISMWQNM--GTLDEVW--- 561
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
K K +VE S LA+E Y + ++ GAV V RGKVSEG+DF H GR V+
Sbjct: 562 -KSKLILVETPDSQETSLALETY--RTACSNGRGAVLLCVARGKVSEGIDFDHHYGRTVL 618
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
G+P+ ++ + E+L Y+ +FL+ + A R Q +GR
Sbjct: 619 CIGIPYQYTESRILKARLEFLQ-------ETYRIKDSTFLAFD------AMRHCAQCLGR 665
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
V+R + DYG ++ D+RF RK Q+ WI
Sbjct: 666 VLRGKDDYGIMVMADDRFK--KRKEQLPKWI 694
>gi|219113321|ref|XP_002186244.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583094|gb|ACI65714.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 614
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 171/649 (26%), Positives = 278/649 (42%), Gaps = 87/649 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I+Y +RTHSQL Q + EL+ + + ++V LG R+ LC + V+ L+ +A N AC L
Sbjct: 4 IIYAARTHSQLSQFVGELRRTAWGDHVRVVALGGRKALCGNAAVARLKSEAAVNEACLDL 63
Query: 154 CK-KGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
K K N D + H DIE +G+ C Y+ +R ++
Sbjct: 64 QKAKSCNCPLLASKDTVDTLAM--HTLASVTDIEQASQLGKASQTCAYYASRTALAAAEV 121
Query: 213 VFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
V PY+ L+ P R +G+ K S++I DEAHNL S LS ++ A + +
Sbjct: 122 VVLPYSMLLSPQTRSAVGLSLKESLVIVDEAHNLPEALRSLHSCSLSLPVVMASLEQLAL 181
Query: 273 CIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI-AEVPINSKELGFTKPGPYIYELL 331
C ++R N +R +L+ K P + E PG ELL
Sbjct: 182 CTTKYASRLAGR-----NIYYLGQIRKVLVTFRKHFECTTPNHKLEERMVSPG----ELL 232
Query: 332 ADLNITQETAYKLIDIVE---VAAELL----------------QEDKLQNKKSTTACRIE 372
+L + +K++ +E +A +LL + D Q + + +
Sbjct: 233 IELKLDSVNLFKILRYLERSRLAQKLLGFTSLVSTEVQAKTGDEGDDAQETTTGISKHVS 292
Query: 373 SIS---NIL----------KIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWW 419
++S N L KI+ G + + + VR+ A +
Sbjct: 293 AMSLVQNFLEKLSLTGQEGKIVTDRPGISPNPDHNPRVRQRQHPA-----------FRYV 341
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN-----FPLRVENPHVITSKQI 474
P + + E ++ L GTL P A EL N F HV++ +
Sbjct: 342 LLQPAVFFENV-LTEAHALALVGGTLRPFVHVAAELLGNQISSSFA-AFSCDHVVSPNNV 399
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
GP+G L+ ++ R + ELG T++++ R VP G+++F PSY +
Sbjct: 400 LLQCHLKGPTGKSLDFRHQQRKTATACNELGATLLHLCRSVPSGMVVFLPSYSYEAHLVQ 459
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
WK + IW + K K EP+QSS ++ Y + GA+ F+V G
Sbjct: 460 HWKRSG------IWNDLQKIKSIYREPKQSSQLDTTLQAY----SRDALKGALLFSVIGG 509
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
K+SEG++F++ R VV+ G+P+ +TDP++ K +D +SG
Sbjct: 510 KMSEGINFSNDMARCVVVVGLPYPDITDPELLEKMAMMDRAPDKT-----------ISGR 558
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+Y RAVNQ+VGR IRH DY A++ CD+R++ S + W++
Sbjct: 559 AYYQNLCMRAVNQSVGRAIRHADDYAAVVLCDQRYSEERIWSALPGWLK 607
>gi|75858956|ref|XP_868818.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
gi|40747660|gb|EAA66816.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
Length = 797
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 193/766 (25%), Positives = 336/766 (43%), Gaps = 135/766 (17%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVTLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
L +Y SRT S++ + + EL+
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELRELMKFRS 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLC--------KKGTN-R 160
T ++R + L SR+ LC+H V + G+ + CR L +KG +
Sbjct: 95 EQLGYTEDFRA--LGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEKKEKGEDVE 152
Query: 161 RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKT------VDIVF 214
C +H + D ++ + + ++ L+N G CPYF R + T +++
Sbjct: 153 LCVYHENL-DLLEPHNLVPPGVFTLDGLLNYGEQHKQCPYFSARRMPLTPVQMPYCNVII 211
Query: 215 APYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNC 273
Y+YL+DP + + E+ K+ I++FDEAHN++ +C ++ S D++ L A N
Sbjct: 212 YSYHYLLDPKIAERVSKEFSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKATRGANNL 271
Query: 274 IDISSTRRGQSSD-ETLNPDNFAILRALLLKLEKRIAE----------------VPINSK 316
+ +SSD E LN + ++ L + R + VP N +
Sbjct: 272 E--RKIQDVKSSDAEKLNNEYMKLVEGLREAEQARDEDQFISNPVLPDDLLKEAVPGNIR 329
Query: 317 E----LGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTAC--R 370
+ F K +I L + +T + + + EL +K C R
Sbjct: 330 RAEHFVAFLKR--FIEYLKTRMKVTHTISETPLSFLNHVKEL----TFIERKPLRFCAER 383
Query: 371 IESISNILKII-------------FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS 417
+ S+ L++I F + + + + + ++ AA V + L
Sbjct: 384 LTSLVRTLELINIEDYQPLQEVATFATLVSTYDKGFLLILEPFESEAATV----PNPVLH 439
Query: 418 WWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWA 476
+ C + IA++ F R S+++TSGTLSP++ + + L ++ + +
Sbjct: 440 FTCLDAAIAIKPVFDRF--SSVVITSGTLSPLEMYPKMLGFTTVMQESYSMTLARRSFLP 497
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+ W
Sbjct: 498 MIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGVVVFFPSYLYMESIISMW 557
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKV 596
+ G L +IW +K +VE + LA+E Y + + GA+ F V RGKV
Sbjct: 558 QGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGALLFCVARGKV 609
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDW 656
SEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 610 SEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD-- 660
Query: 657 YNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 661 ----AMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRNQLPKWI 700
>gi|299471116|emb|CBN78974.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 415
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 130/199 (65%), Gaps = 12/199 (6%)
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSG 585
Y M+ C+ WK+ S+G W RI HK+P++EPR ++ +E+Y AK+++T G
Sbjct: 27 YRTMNDCVQRWKHFSNGK---AWARISAHKEPMIEPRTAADLKAVMEEYDAKIENTG--G 81
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKE 645
AVF AVCRGKVSEG+DF+D R VV+TG+P+A DPKV LK++Y+ G
Sbjct: 82 AVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDPKVVLKKKYMSESLLPPG----- 136
Query: 646 TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPH 705
++ ++G +WY QQASRAVNQA+GRVIRHR DYG ++ CD RFA + +SLW +P
Sbjct: 137 --VARVTGNEWYQQQASRAVNQAIGRVIRHRLDYGCVVLCDSRFAEDRNRKSLSLWARPF 194
Query: 706 IQCYSKFGDVVYTLTRFFR 724
++ S FG V LT+FF+
Sbjct: 195 VRECSGFGKVAADLTKFFK 213
>gi|452981603|gb|EME81363.1| hypothetical protein MYCFIDRAFT_189512 [Pseudocercospora fijiensis
CIRAD86]
Length = 776
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 188/747 (25%), Positives = 326/747 (43%), Gaps = 103/747 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + Q+L + + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FYIGDLPVLFPYPRIYPEQYEYMCALKQTLDSGGHCVLEMPSGTGKTVSLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK YR
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMKYRS 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + GS + CR L + C
Sbjct: 95 DQLGHAEDFRGLGLTSRKNLCLHPSVKQEKSGSVVDARCRSLTAAFVKEKKDRGEDVDVC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + ++ ++ G CPYF R + +++ Y+YL+D
Sbjct: 155 IYHDNL-DLLEPHNLIPPGVWTLDGMLRYGEQQKQCPYFTARRMMPFCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + + E K+ I++FDEAHN++ +C ++ S DL+ L A N ++ T
Sbjct: 214 PKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKAARGAAN-LEREITTM 272
Query: 282 GQSSDETLNPDNFAILRAL----LLKLEKRIAEVPINSKEL------GFTKPGPYIYELL 331
Q+ + L + ++ L + E P +L G + + L
Sbjct: 273 KQTDADKLQNEYAKLVEGLREADAARDEGAFMSNPALPDDLLKEAVPGNIRRAEHFVAFL 332
Query: 332 ADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI--IFR 383
+T K++ ++ E LQ K +K C R+ S+ L++ I
Sbjct: 333 KRFIEYLKTRMKVLHVISETPPSFLQHLKELTFIERKPLRFCAERLTSLVRTLELTNIED 392
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEV 435
+ A + D +L+ S T L + C + IA++ F R
Sbjct: 393 YQPLQEVATFATLAATYDTGFLLILEPYESDTATVPNPILHFTCLDAAIAIKPVFDRF-- 450
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+I+TSGT+SP++ + + L ++ + K IV G ++S ++ R
Sbjct: 451 SSVIITSGTISPLEMYPKMLGFECVVQESYTMTLARKSFLPMIVTRGSDQGQISSGFQTR 510
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ + GN ++ +++ PDG+++FFPSY M+ I+ W+ + G L ++W K K
Sbjct: 511 NDPANVRNYGNLLIEFSKLTPDGIVVFFPSYLYMESVISMWQ--TMGILDSVW----KSK 564
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+VE S LA+E Y + ++ GAV V RGKVSEG+DF H GR V+ G+
Sbjct: 565 LILVETPDSQETSLALETY--RTACSNGRGAVLLCVARGKVSEGIDFDHHYGRTVLCIGV 622
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PF ++ + E+L +ET + D+ + A R Q +GRV+R
Sbjct: 623 PFQYTESRILKARLEFL-----------RETYR--IKENDFLSFDAMRHCAQCLGRVLRG 669
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWI 702
+ DYG ++ D+RFA +++Q+ WI
Sbjct: 670 KDDYGVMVMADKRFA--KKRNQLPKWI 694
>gi|403215508|emb|CCK70007.1| hypothetical protein KNAG_0D02580 [Kazachstania naganishii CBS
8797]
Length = 832
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 185/689 (26%), Positives = 306/689 (44%), Gaps = 127/689 (18%)
Query: 97 ILYTSRTHSQLRQVIQELK-----------TSNYRPKMVILGSREQLCIHREVSLLRG-S 144
I + SRTHSQL Q +L+ N R K + L S++QLCI+ EV+
Sbjct: 210 IFFASRTHSQLNQFASQLQLPKFPSSFPDSVPNERVKFLPLASKKQLCINPEVTKWGTLE 269
Query: 145 AQNNACRFL------CKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPC 198
A N+AC + C N H+S+ + K+ L + DIE+LV G+ C
Sbjct: 270 AINDACYEVRHSPKGCPYYQNTTEWHYSKDTTFFKDK--LFESVHDIENLVETGQHLRVC 327
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
PY+ +R+ ++++ PY YL+ R +G++ K+SI+I DEAHNL S +
Sbjct: 328 PYYASRDTLPGMEVITLPYQYLLSESTRDIMGIDLKDSIVIIDEAHNLVDTVNSIHSAKV 387
Query: 259 SSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL 318
+ L C + ++ + R LNP N R LLKL K I+ + K
Sbjct: 388 TLDDLITCENGIRHYLQKFKLR--------LNPGN----RVNLLKLLKLISTISQYIKS- 434
Query: 319 GFTKPGPYI--YELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISN 376
F KPG + ++L D N ++LI + V S A +I++
Sbjct: 435 NFKKPGQKVDANDILGDSNADILNIHRLIKYIRV--------------SKVAYKIDTYIK 480
Query: 377 ILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLS---------WWCFNPGIAM 427
L DK TA + + ++ L K L+ + F G +M
Sbjct: 481 AL-----DKKTADDSPTD---KPGPTTSSQPLLFKVVSFLTCLTNPASEGQFFFETGPSM 532
Query: 428 QEFSRLEVGS-----------IILTSGTLSPMDSFAQELKLNFPLRVENP-------HVI 469
E+ LE + L GT+ P+ + L FPL + H++
Sbjct: 533 -EYMLLEPSKQFESIIEDARCVFLAGGTMEPISDLTENL---FPLVPKEEISIFQCNHIV 588
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNI---------ARIVP--DG 518
+ ++ G L ++ NR + NT++NI ++ VP G
Sbjct: 589 PDANVETFVI--NEPG--LEFTFANRGN--------NTLINIQLFSFYKKLSKTVPLSGG 636
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
++ FFPSY + I WK I++ + + +K E + + DY +
Sbjct: 637 IVGFFPSYQFLQNIIDQWKENG------IFDEMNRTRKIFYESKNGKD---PLNDYTTVV 687
Query: 579 KDTSTS-GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
+ GA+ FAV G++SEG++F D+ RAVV+TG+PF + ++++K+ +L + +
Sbjct: 688 TNQDPKVGAILFAVVGGRLSEGINFQDNLCRAVVMTGLPFPNLASGELQIKKLHLQEKVK 747
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
+GG+ K+ + +D+ +AVNQ+VGR IRH +DY I D R+++ S + +
Sbjct: 748 KRGGDTKQ------ATKDFIENICMKAVNQSVGRAIRHMNDYANIYLLDNRYSNESIRGK 801
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
+SLW++ IQ + V+ TRFF E+
Sbjct: 802 LSLWVRRRIQPQTSLDGVITETTRFFTEK 830
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 14 PFEAYDCQLVYMEKVIQSL----------QNKCNALLESPTGTGKTLCLLCATLAW-RKS 62
PFE YD Q+ M+ + L Q K +LESPTGTGKTL L+CA+L+W R +
Sbjct: 8 PFEPYDIQVELMQCIYDVLSSTASTNANVQRKKIGILESPTGTGKTLSLICASLSWLRDN 67
Query: 63 LGSFSTLGSQVNNQISGSQS 82
+ G V + S S S
Sbjct: 68 KLKLLSCGDNVGGENSDSDS 87
>gi|398396458|ref|XP_003851687.1| DNA repair helicase [Zymoseptoria tritici IPO323]
gi|339471567|gb|EGP86663.1| hypothetical protein MYCGRDRAFT_43883 [Zymoseptoria tritici IPO323]
Length = 801
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 188/747 (25%), Positives = 324/747 (43%), Gaps = 103/747 (13%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIEDLPVLFPYPRIYPEQYAYMCDLKRTLDSGGHCVLEMPSGTGKTVSLLSLIVAYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK YR
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMKYRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + GS ++ CR L + C
Sbjct: 95 DQLGEVEDFRGLGLTSRKNLCLHPSVKREKSGSVVDSRCRSLTAGFVKEKKERGEDVDLC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + ++ ++ G CPYF R + +++ Y+YL+D
Sbjct: 155 IYHDNL-DLLEPHNLIPPGVWTLDGMLRYGEQQKQCPYFTARRMMPFCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + + E K+ I++FDEAHN++ +C ++ S DL+ L A N ++ T
Sbjct: 214 PKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKAARGASN-LERKITEM 272
Query: 282 GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL----------GFTKPGPYIYELL 331
+ E L + ++ L E R +++ L G + + L
Sbjct: 273 KDTDAEKLQNEYAKLVEGLREADEARDEGAFMSNPALPDDLLKEAIPGNIRRAEHFTAFL 332
Query: 332 ADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI--IFR 383
+T K++ ++ E LQ K KK C R+ S+ L++ I
Sbjct: 333 KRFIEYLKTRMKVLHVISETPPSFLQHLKELTFIEKKPLRFCAERLTSLVRTLELSNIED 392
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEV 435
+ A + V D +L+ S T L + C + IA++ F R
Sbjct: 393 YQPLQEVATFATLVATYDTGFLLILEPYESDTATVPNPILHFTCLDAAIAIKPVFDRF-- 450
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
S+I+TSGT+SP++ + + L ++ + + IV G ++S ++ R
Sbjct: 451 SSVIITSGTISPLEMYPKMLGFTAVVQESYAMTLARRSFLPMIVTRGSDQGQMSSGFQTR 510
Query: 496 DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK 555
+ G I+ +++ PDG+++FFPSY M+ I+ W+ G L +W K K
Sbjct: 511 SDPGNIRNYGALIIEFSKLTPDGIVVFFPSYLYMESVISMWQGM--GILDQVW----KSK 564
Query: 556 KPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+VE S LA+E Y + ++ GAV V RGKVSEG+DF H GR V+ G+
Sbjct: 565 LILVETPDSQETSLALETY--RTACSNGRGAVLLCVARGKVSEGIDFDHHYGRTVLCIGV 622
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
PF ++ + E+L +ET + D+ + A R Q +GRV+R
Sbjct: 623 PFQYTESRILKARLEFL-----------RETYR--IRENDFLSFDAMRHCAQCLGRVLRG 669
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWI 702
+ DYG ++ D+RFA +++Q+ WI
Sbjct: 670 KDDYGVMVMADKRFA--KKRTQLPKWI 694
>gi|408395822|gb|EKJ74995.1| hypothetical protein FPSE_04815 [Fusarium pseudograminearum CS3096]
Length = 789
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 192/762 (25%), Positives = 328/762 (43%), Gaps = 123/762 (16%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FNIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQY 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
+ L +Y SRT S++ + + ELK+ YR
Sbjct: 63 MPEKRKL----------------------------IYCSRTMSEIEKALVELKSLMKYRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLRGSAQNNA-CRFLC--------KKGTNRR-C 162
+ + L SR+ LC+H V + A +A CR L ++G N C
Sbjct: 95 EELGYEEEFRGLGLTSRKNLCLHPSVKREKSGAIVDARCRSLTAGFVKEKKERGENVDVC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + + +D++ G CPYF R + + ++V Y+YL+D
Sbjct: 155 VYHDNL-DLLEPHNLIPNGVWSFDDIIRYGEEQKQCPYFTARRMMQYCNVVIFSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
P + + ++ K+ I++FDEAHN++ +C ++ S D++ L A+N + S R
Sbjct: 214 PKIAERVSKDFSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRGAQNLENKISQMR 273
Query: 282 G-----------------QSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPG 324
+ +DE D F AL L K I E
Sbjct: 274 DTDQEQLQNEYQKLVQGLRDADEARQEDAFMANPALPEDLLKEAVPGNIRRAEHFIAFLK 333
Query: 325 PYIYELLADLNITQ---ETAYKLIDIVEVAAELLQEDKLQNKKSTTAC--RIESISNILK 379
+I L + + Q ET + L+E KK C R+ S+ L+
Sbjct: 334 RFIEYLKTRMKVRQVISETPPSFLS-------HLREHTFIEKKPLRFCAERLTSLVRTLE 386
Query: 380 II-------------FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIA 426
+ F + + + + +++ A+V + L + C + IA
Sbjct: 387 LTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESDTAEV----PNPVLHFTCLDAAIA 442
Query: 427 MQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSG 485
++ F R S+I+TSGT+SP++ + + L ++ + + IV G
Sbjct: 443 IKPVFDRF--YSVIITSGTISPLEIYPKMLDFQTVIQESYAMTLARRSFMPMIVTRGSDQ 500
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
+++S++ R+ + GN + A+I PDG+++FFPSY M+ I+ W+ G L
Sbjct: 501 ASVSTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFPSYLYMESIISMWQGM--GVLD 558
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
+W K+K +VE + LA+E Y + GAV V RGKVSEG+DF
Sbjct: 559 EVW----KYKLILVETPDAQETSLALETYRTAC--CNGRGAVLLCVARGKVSEGIDFDHQ 612
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
GR V+ G+PF T+ ++ R LQ + KE D+ + A R
Sbjct: 613 YGRTVLCIGVPF-QYTESRILKAR----LQFLRETYRIKEN--------DFLSFDAMRHA 659
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
Q +GRV+R + DYG ++ D RF +++Q+ WI +Q
Sbjct: 660 AQCLGRVLRGKDDYGIMVLADRRFQ--KKRTQLPKWINQGLQ 699
>gi|254583620|ref|XP_002497378.1| ZYRO0F04136p [Zygosaccharomyces rouxii]
gi|238940271|emb|CAR28445.1| ZYRO0F04136p [Zygosaccharomyces rouxii]
Length = 803
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 185/703 (26%), Positives = 320/703 (45%), Gaps = 114/703 (16%)
Query: 68 TLGSQVNNQISGSQSSVNSSQSG---DSKLPT-ILYTSRTHSQLRQVIQELKTSNYRP-- 121
TLG +V + ++ + Q D P + + SRTHSQLRQ +L+ + P
Sbjct: 161 TLGREVKDMLAKLNGVAKNEQDKFDIDHLNPIKVYFASRTHSQLRQFASQLRLPIFPPSL 220
Query: 122 --------KMVILGSREQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYM 172
K + LGSR+QLCI+ +VS L+ + A N+AC+ L + G N C + + +
Sbjct: 221 PNVKNESIKHLPLGSRKQLCINPQVSRLKSTDAINDACKELQQNGKNG-CKFKQNINNQL 279
Query: 173 KNNPHLGDEPI----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG 228
+ D DIEDL +G++ CPY+ +R+ + +I+ PY +L+ R+
Sbjct: 280 EQ--EFRDRSFTSIHDIEDLAALGQSLDICPYYASRDSLTSAEIITLPYQFLLFQSTRES 337
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDET 288
LG++ KNS+++ DEAHNL S ++S L + + N + +R G
Sbjct: 338 LGLDLKNSVVVIDEAHNLIDTVNAIHSSEISLQDLQSVKTGLTNYLSKFKSRLG------ 391
Query: 289 LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIV 348
P N R L+KL K I + I +++ + KPG ++ID +
Sbjct: 392 --PGN----RVNLMKLIKLIDVLIIFTRQ-NYKKPG------------------QVIDPI 426
Query: 349 EVAAELLQEDKLQNKKSTTACRIESIS----NILKIIFRDKGTAH---------SAYYRV 395
E+ + D L K +I IS + ++ + +D+G + +++
Sbjct: 427 EILSG--NADTLNIHKINKYIKISKISYKIQSYMQSVEKDQGINNPGQPLLFKIASFITC 484
Query: 396 HVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGS-IILTSGTLSPMDSFAQE 454
KG + + + P Q S LE +IL GT+ P+ +
Sbjct: 485 LTYPTQEGKFFFEKGPS---IKYMLLQPDKCFQ--SVLEDSRCVILAGGTMQPVSDVLEN 539
Query: 455 LKLNFPLRVENPHVITSKQIWAGIVPVGPSG-YLLNS-----SYRNRDSIEYKQELGNTI 508
L FP N V S ++P G Y+L ++ R+ + +++G
Sbjct: 540 L---FPTVSNNQLVNFS---CDHVIPDDNLGTYVLQEPQIELTFEKREQPQVLRQMGEFY 593
Query: 509 VNIARIVP--DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSL 566
+ +++ VP G++ FFPSY + I WK T +W ++ K +K E +
Sbjct: 594 LQLSKAVPLTGGIVGFFPSYQYLQFVIDHWKKTG------LWSQLTKLRKVNYETKSG-- 645
Query: 567 FPLAIEDYMAKLKDT--STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
ED + + + GA+ FAV G++SEG++F D+ RA+V+TG+PF + +
Sbjct: 646 -----EDPLPEYTEAVDKGEGAMLFAVVGGRLSEGINFQDNLCRAIVMTGLPFPNVFSGE 700
Query: 625 VRLKREYLDLQAQSQGGEYKE----TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
+ +KR +L+ + +GG ++ TKL ++ +AVNQ+VGR IRH +DY
Sbjct: 701 MMVKRSHLENKILQKGGTRQDAMSATKL-------FFETICLKAVNQSVGRAIRHANDYA 753
Query: 681 AIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
I D+R+ +P + ++S W+ +Q S ++ + RFF
Sbjct: 754 NIYLLDKRYGNPHTQEKLSHWVSKRLQPQSDLDSIMDSTRRFF 796
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSL-QNKCNALLESPTGTGKTLCLLCATLAW 59
P++ YD QL M V +L K ++ESPTGTGKTL L+C+ L W
Sbjct: 8 PYDPYDIQLELMRCVYDALSHGKKLCIVESPTGTGKTLSLICSVLTW 54
>gi|150863715|ref|XP_001382279.2| YPL008W (CHL1)-like protein [Scheffersomyces stipitis CBS 6054]
gi|206558237|sp|A3LN13.2|CHL1_PICST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|149384971|gb|ABN64250.2| syntenic [Scheffersomyces stipitis CBS 6054]
Length = 835
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 180/677 (26%), Positives = 299/677 (44%), Gaps = 107/677 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRGSAQN 147
I ++SRTHSQL Q +L + + R K + +GSR+QLCI+ +V + N
Sbjct: 206 IYFSSRTHSQLNQFAHQLALTKFQSSFKGVEERTKYLPIGSRKQLCINEKVKSFSKNDSN 265
Query: 148 ------------NACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTF 195
C+FL K N +++D + H DIE++ ++G
Sbjct: 266 INDVCVDLQKSKEGCQFLPKDYLNSSLTK--KLSDLSLSKIH------DIEEIADLGSNM 317
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ R+ + +I+ PY L+ R L ++ ++SI++ DEAHNL
Sbjct: 318 KVCPYYSVRKGVEMTEIISLPYQILLSESTRAILNLQIEDSIVVIDEAHNL--------- 368
Query: 256 FDLSSGLLTACIS--EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV-- 311
D + + + CI+ E + I G+ + LN N R L+KL K V
Sbjct: 369 MDTITSMHSVCITIGEMNSIIKALKFYLGRFL-KKLNSGN----RIHLMKLIKLCQLVIS 423
Query: 312 ---------------PINSKELGFTKPGPYI-YELLADLNITQETAYKLIDIVEVAAELL 355
IN+ ++ G + +L + AYK+ +E AE
Sbjct: 424 FIQKSEKCNNIKVGNEINTSDIYQNSTGDMLNIHILEAFLAKSKIAYKIESYMEKVAENE 483
Query: 356 QEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
E Q K S++ + I LK + + D G S
Sbjct: 484 NE---QAKTSSSNPLLYKIVQFLKCLVNPSKEGKFFW-------------DSTNGITS-- 525
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP--------H 467
+ + +P ++ + +IL GT+ PM F L FP VE+ H
Sbjct: 526 IKYMLLDPSSVFKDIVS-KARCVILCGGTMEPMSEFKNFL---FPY-VEDKKIKSFSCNH 580
Query: 468 VITSKQIWAGIVPVGPSGYL-LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
+I + + PV + L S+ NR++ + LG +IV I + VPDG+++FFPSY
Sbjct: 581 IIPPDNL--KVYPVSSQNNVTLEFSFDNRNNPLMIEALGASIVRICQSVPDGVVVFFPSY 638
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGA 586
M+ ++ WK+T + +I KK EP +S + DY +K+ GA
Sbjct: 639 KYMNHILSIWKSTD------VLTQIESQKKLFEEPTSASQVQTILADYANTIKE-EKKGA 691
Query: 587 VFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET 646
+ F+V GK+SEG++FAD GRAVV+ G+P+ ++ KR++++ +A ++G E
Sbjct: 692 ILFSVVGGKMSEGINFADELGRAVVMVGLPYPNAYSGEIIAKRKFIESEAIARGCSMSEA 751
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ + + +Y RAVNQ++GR IRH +DY I D R+ ++++S W++ I
Sbjct: 752 Q---RNSQSYYENLCMRAVNQSIGRSIRHINDYSIIYLVDCRYQSSRIQNKLSSWVRKRI 808
Query: 707 QCYSKFGDVVYTLTRFF 723
+ + D + TR F
Sbjct: 809 ETRNYNMDQIMEETRDF 825
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAW 59
P++ YD Q+ M+ + ++ N L ESPTGTGKTL ++C+T+ W
Sbjct: 15 PYKPYDIQIQLMDAIYDTIDNGYKIGLFESPTGTGKTLSIICSTMTW 61
>gi|310791719|gb|EFQ27246.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 897
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 184/715 (25%), Positives = 313/715 (43%), Gaps = 111/715 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYR---PKMVILG------------------SREQLCIH 135
I YTSRTHSQL Q I EL+ + P V+ G SR++LCI+
Sbjct: 208 IYYTSRTHSQLTQFIHELRRPTFPSSIPPSVVQGRSKGEDAAKEPVKHLPLSSRQKLCIN 267
Query: 136 REVSLLRG-SAQNNACRFLCKKGTNRRCNH---HSRVADYMKNNPHLGDEPIDIEDLVNI 191
V+ L SA N+ C L K + +C + VA + DIEDL ++
Sbjct: 268 PSVARLGTLSAINDRCSELQKPKSKDKCPYTLKEDNVAQTHQFRDTAHATLPDIEDLYHL 327
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G+ CPY+ +R +I+ PY L+ R LG++ + +++I DEAHN+
Sbjct: 328 GKKLSICPYYASRAAVAGAEIITLPYPLLLQKNARDALGIKLEGNVVIVDEAHNI----M 383
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
DA + +S + + + +A+ + + R G+ L +N ++ + +E ++E
Sbjct: 384 DAVANVYASEIKLSELRQARQMLGVYVRRFGKK----LKGENRVMVGQVGRVIEG-LSEW 438
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
+L T+ LL + Q ++L+ + +QE KL K + +
Sbjct: 439 MDGQSKLKSTQGIVDSKVLLRCKGVDQINLFRLV-------QYIQESKLAYKIESYVAHV 491
Query: 372 E--------------SISNILKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
E S + +L + F T S+ R+ + + D+
Sbjct: 492 EEEAVGAGHGKPPSRSSAPVLHTLSSFLISLTNLSSEGRIFYEKLATDPPDI-------Q 544
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP-------HV 468
LS+ +P A + ++IL GT+SP + + L FP E+ HV
Sbjct: 545 LSYLLLSPTHAFSSIA-TSARAVILAGGTMSPFNDYKSHL---FPYLPESKLTTLSCGHV 600
Query: 469 ITSKQ--IW--AGIVPVGPSGYLLNS---SYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
I +W AG P GP+ + ++ S++ R LG I+N+ +VPDG+++
Sbjct: 601 IPPSNLCVWTLAGPEP-GPNRDINSTFEFSFQRRGEASTMSNLGMAILNMCNVVPDGVVV 659
Query: 522 FFPSYYLMDQCIACWKNTSHGN------LTTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
FFPSY +++ + WK N ++IW+R+ + K E R S +
Sbjct: 660 FFPSYGYLEEVVTAWKGAGPRNSQGQNGASSIWDRLQQRKAVFSETRGGSSDEVLEAYSR 719
Query: 576 AKLKDTSTS---------GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
A L D S GA+ +V GK+SEG++F+D GR V+I G+P+ + P+ +
Sbjct: 720 AILGDGSEPHSGAAAKPRGALLLSVVGGKMSEGINFSDRLGRCVIIVGLPYPNINSPEWK 779
Query: 627 LKREYLDLQ----------AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
K EY++ +Q + ++ + D+Y RAVNQ++GR IRH+
Sbjct: 780 AKTEYIESTTVQRLTDPSLGTAQMAREEAEAVAKQAARDFYENACMRAVNQSIGRAIRHQ 839
Query: 677 HDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK---FGDVVYTLTRFFREERI 728
DY AI+ D R+ + ++ WI+ + S ++ L+ FFR +R+
Sbjct: 840 GDYAAIVLVDRRYGTDRIREKLPGWIRGGLNGDSHEKGLPQLMGALSGFFRSKRM 894
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQ--NKCNALLESPTGTGKTLCLLCATLAW 59
ID P+ YD Q +M+ + LQ N +LESPTGTGK+L L+CA+L W
Sbjct: 17 IDFNHPYTPYDVQTDFMKAAYRVLQRGNGQVGILESPTGTGKSLSLICASLTW 69
>gi|448096961|ref|XP_004198556.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359379978|emb|CCE82219.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 178/660 (26%), Positives = 304/660 (46%), Gaps = 75/660 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP---------KMVILGSREQLCIHREVSLLRG-SAQ 146
I+++SRTHSQL Q +L +N+ P K V L SR+QLCIH +S L +
Sbjct: 199 IIFSSRTHSQLSQFAHQLGLTNFNPTFEGIPERIKFVPLASRKQLCIHPRISHLTSLDSI 258
Query: 147 NNACRFLCKKGTNRRCNHHSRVADYMKNN-PHLGDEPI-DIEDLVNIGRTFGPCPYFMTR 204
N AC L ++ T C + + K L I DIEDL ++G CPY+ R
Sbjct: 259 NEACIDL-QQNTKEGCAFNPKHGSMSKKKFSDLSFTKIHDIEDLGSLGTGLRVCPYYSVR 317
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLT 264
K+ +++ +PY L+ R+ L V+ +++I++ DEAHNL D L +
Sbjct: 318 NGLKSAEVIASPYQILLQKSARETLNVDVEDAIIVIDEAHNL---------IDTIISLYS 368
Query: 265 ACISEAKNCIDISSTRRG-----QSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELG 319
I N ++I +G + + LN N L LL KL + I S +
Sbjct: 369 VSI----NLLEIEMIIKGIRYYLRKFMKKLNSGNRINLMKLL-KLCQSIQNFINKSIDRK 423
Query: 320 FTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILK 379
+ G E++ + I +T LI+I +V + L++ K+ K T + E ++
Sbjct: 424 ESHNGS---EVMVN-EIFGDTTGDLINIYKVE-KFLEKSKIAYKIDTYMEKEEGLT---- 474
Query: 380 IIFRDKGTAHSAYYRVHVREADANAADVLK-----GKASRTLSWWCFNPGIAMQEFSRLE 434
F K ++ + + AN ++ K K + + +P ++ +
Sbjct: 475 --FIKKSSSPLLFKITKFLKCLANPSNEGKFFWNVTKDKTAIDYLLLDPSEIFRDIVS-K 531
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPL-------RVENPHVITSKQIWAGIVPVGPSGY- 486
+IL GT+ PM+ + + L FP + H+I K + + P+G G
Sbjct: 532 CRCLILCGGTMEPMEDYKKYL---FPYVPNESIKKFSCDHIIPDKNLI--VFPIGTYGNS 586
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
+ SY R + LGN I I G ++FFPSY +++ A W+ HG L +
Sbjct: 587 VFEFSYEKRGDLNMILNLGNVITQICENTKGGAVVFFPSYRYLNEVKAQWR--IHGILRS 644
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
I +R + EP S+ + Y + ++ A+ FAV GK+SEG++FAD
Sbjct: 645 IEDR----RTVYYEPIDSADVAQILNSYRTSI-ESDNGLAIIFAVVGGKLSEGINFADDL 699
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
RAV++ GMP+ +T + ++E+++ + G K+ + + + +Y+ RAVN
Sbjct: 700 ARAVIMVGMPYPNVTSADLIARKEFIEKTILEENGNVKDAR---TASKTFYDNLCMRAVN 756
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK---FGDVVYTLTRFF 723
Q++GR IRH+ D I D+R+ + + +S++S W++ + S F V+ T+F+
Sbjct: 757 QSIGRSIRHKDDSSLIYLIDQRYGYETVQSKLSGWVKKRLYTKSSCTYFNKVLEETTKFY 816
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
PFE YD QL M + +++N + ESPTGTGKTL ++C+T+ W ++
Sbjct: 18 PFEPYDIQLELMRSIYDAIENYKIGIFESPTGTGKTLSIICSTMTWLRN 66
>gi|403358712|gb|EJY79009.1| Fanconi anemia group J protein [Oxytricha trifallax]
Length = 965
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 246/542 (45%), Gaps = 73/542 (13%)
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKN----CIDISSTRRGQSSDETLNPDN 293
+ DE HN C +A SF L +G + +E + ++ + + G ++ N D
Sbjct: 252 FVIDEGHNFSQSCQEAQSFILETGEIIRAYTELNDLYAKSVNQAKIKTGHGPEKPENHD- 310
Query: 294 FAILRALL------LKLEKRIAEV-PINSKELGFTKPGPYIY------ELLA--DLNITQ 338
F ++ L+ +K + + E IN + T G Y+ E+L +N +
Sbjct: 311 FQSVKQLIGIIDKFMKFQTDLKEKHQINIQNSKNTFQGKYVLNISVIDEILTYDQMNSSI 370
Query: 339 ETAYKLIDIV--EVAAELLQEDKLQNKKSTTACR--IESISNILKIIFRDKGTAHSAY-- 392
++ K+ + V E + ++K Q K TTA ++ + + + F + AY
Sbjct: 371 KSLKKITNFVMDEGSERSDNQNKDQKKFDTTALDHFLDCMLKLKRTFFSNTFDQVKAYKS 430
Query: 393 -------------YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSII 439
R H ++ ++ + + +CFN ++ R SII
Sbjct: 431 IDEFQVSDHYILIQRKHFKDLHLTTDQMI----FKEMHLYCFNAAFTFKQIQRKNPFSII 486
Query: 440 LTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSY---RNRD 496
LTSG+LSP+ + + EL + F + HVI QI + P +G L+S Y +
Sbjct: 487 LTSGSLSPISTVSYELDVKFDYIMTGGHVIQKNQILPIVYPFCDNGLELSSKYDLPKEHK 546
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
+I + G + + + G+L+FF SY M W + I K K
Sbjct: 547 TI-IDENYGKLVRDACLTIEGGILVFFSSYEKMKYSYDLWTKKMY------MASILKVKS 599
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKD----TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
E + L IE Y+ +++ + +GAV F VCRG SEG DF+D+ R V+I
Sbjct: 600 FYQEQQNKELNNQTIESYLRDMRELDMQSKKNGAVLFGVCRGNFSEGYDFSDYDARCVII 659
Query: 613 TGMPFATMTDPKVRLKREYLDL---QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
GMPFA ++DPK+ +K +LD Q + + ++T +F+SG+ WY QQ RA+NQAV
Sbjct: 660 IGMPFACISDPKLLMKWHFLDYRFNQMKENSQKIRDTDSNFISGKTWYEQQTHRAINQAV 719
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI----------QCYSKFGDVVYTL 719
GRVIRH++DYG +I DER+ ++ + W++ I Q Y KF +Y L
Sbjct: 720 GRVIRHKNDYGVVILADERYRLSKNQAMLPGWMRKQITVANSSKELRQHYQKF---IYDL 776
Query: 720 TR 721
+
Sbjct: 777 KK 778
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 22/164 (13%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
T+ + GI+++FP Y Q YM +++++N A LE PTGTGKTL LL +TLA+
Sbjct: 97 TFSVEGIEIKFPKIPYKVQEEYMTLAVKAIKNNKYAALEMPTGTGKTLSLLSSTLAF--- 153
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP- 121
I S S+Q KL +YTSRTHSQL QV +E++ S Y+
Sbjct: 154 --------------IDQYNQSNLSTQKQKLKL---IYTSRTHSQLSQVRKEIRKSPYQYF 196
Query: 122 KMVILGSREQLCIHREVSL-LRGSAQNNACRFLCKKGTNRRCNH 164
K V + SR+ C+ ++ G N C + +N RC +
Sbjct: 197 KSVTIASRDYYCLRSDLKQEFTGIDLNKQCHKSKQLASNYRCKY 240
>gi|189188692|ref|XP_001930685.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972291|gb|EDU39790.1| TFIIH basal transcription factor complex helicase subunit
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 772
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 179/721 (24%), Positives = 315/721 (43%), Gaps = 102/721 (14%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + +LE P+GTGKT+ LL +A+++ L
Sbjct: 6 RTLDQGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPEKRKL-------------------- 45
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP---------KMVILGSREQLCIHREVS 139
+Y SRT S++ + + ELK YR + + L SR+ LC+H V
Sbjct: 46 --------IYCSRTMSEIEKALAELKALMKYRTTELGYEEDFRGLGLTSRKNLCLHPSVK 97
Query: 140 LLR-GSAQNNACRFLCKKGTNRR---------CNHHSRVADYMKNNPHLGDEPIDIEDLV 189
+ G+ + CR L + C +H + D ++ + + + ++
Sbjct: 98 REKSGTVVDARCRSLTAGFVKEKKERGEPVELCVYHENL-DLLEPHNLIPPGVWTFDGML 156
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEG 248
G CPYF R + +++ Y+YL+DP + E K+ I++FDEAHN++
Sbjct: 157 KYGEQQKQCPYFTARRMMPHCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNIDN 216
Query: 249 ICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI 308
+C ++ S DL+ +L ++ N +D T S E L + ++ L E R
Sbjct: 217 VCIESLSIDLTEDVLRKA-TKGVNNLDRKITEMKSSDAEKLQNEYAKLVEGLRAADEARN 275
Query: 309 AEVPINSKEL----------GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQE 357
+ + + L G + + L +T K++++V + E L+
Sbjct: 276 EDAFMANPALPDDLLTEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLNVVADTPPEFLKH 335
Query: 358 DK---LQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAADVLKG 410
+ +K C R+ S+ L++ I + A + V + +++
Sbjct: 336 LRDLTFIERKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYETGFLLIIEP 395
Query: 411 KASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
S T L C + IA++ F R S+I+TSGT+SP+D + + L N ++
Sbjct: 396 FESATATVPNPVLHLTCLDAAIAIKPVFERFY--SVIVTSGTMSPLDMYPRMLNFNTVVQ 453
Query: 463 VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
+T K IV G + S + +R+ ++ ++ GN ++ ++ PDG+++F
Sbjct: 454 ESFTMTLTRKSFLPMIVDRGNDQNQVTSQFEHRNDLQVQRNFGNLLIEFCKLTPDGVVVF 513
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS 582
FPSY M+ I+ W+ L T+W K+K +VE + LA+E + +
Sbjct: 514 FPSYLYMESIISAWQGME--ILDTVW----KYKLILVETPDAQETALALETFRTACNN-- 565
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGE 642
GAV V RGKVSEG+DF H GR V+ G+P+ ++ + E+L
Sbjct: 566 GRGAVLLCVARGKVSEGIDFDHHYGRTVICMGVPYQYTESRILKARLEFLR-------ET 618
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Y+ + FLS + A R Q +GRVIR + DYG ++ D+RF +++Q+ WI
Sbjct: 619 YRIKEADFLSFD------AMRHAAQCLGRVIRGKDDYGIMVLADKRFN--KKQTQLPKWI 670
Query: 703 Q 703
Q
Sbjct: 671 Q 671
>gi|123493892|ref|XP_001326390.1| helicase [Trichomonas vaginalis G3]
gi|121909304|gb|EAY14167.1| helicase, putative [Trichomonas vaginalis G3]
Length = 717
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 188/757 (24%), Positives = 327/757 (43%), Gaps = 108/757 (14%)
Query: 18 YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW----RKSLGSFSTLGSQV 73
Y Q + +I++ Q ESPTGTGK++ +L ++LA+ K + G+
Sbjct: 20 YSIQTEFATDMIKAFQENKIGFFESPTGTGKSMSVLTSSLAFIQEKNKDIADSYAYGTD- 78
Query: 74 NNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--------TSNYRPKMVI 125
N+ I+ + +++ SKL + +RTHSQ+++++ ELK S + +
Sbjct: 79 NDDIA---DILYANKPKRSKL---IVCTRTHSQIKELVNELKRPSLLRYKDSRRTTRCIS 132
Query: 126 LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDI 185
L SR LCI+ + GS NN +CKK + N R AD +K + EP DI
Sbjct: 133 LASRRFLCINDVYANYSGSELNN----VCKKSCDYYKNFKDRKADILK---KISTEPHDI 185
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHN 245
EDL++ GR CPYF +R + D++ PY L + L ++ N+ ++ DE HN
Sbjct: 186 EDLMSFGRAGIFCPYFASRATIRFSDVILMPYQTLFQQQTLESLKIDISNAYIVIDEGHN 245
Query: 246 LEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLE 305
L D + + + +++A+ DI+ G + L K++
Sbjct: 246 L---------VDALNSMYSISLTKAE---DITGVTNGLKE-----------FQMKLTKVK 282
Query: 306 KRIAEVPI----NSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAA--ELLQEDK 359
I+E P + K + T E++ +++ A +I ++ A +L + +
Sbjct: 283 GPISEDPSKLEDDKKPVEETPQNQLKKEIMMNMSTLNRIATGIISVMNKVAKGQLPKVME 342
Query: 360 LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRV--------------------HVRE 399
+ + + ++ R NI I D S YR+ E
Sbjct: 343 MNDFQESSGLR-----NINPFILLDFVHEKSLVYRICGKKEEKERLSSTTAFRKLLQFVE 397
Query: 400 ADANAADVLKGKASR-TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL--K 456
A N + + ++S+ NP + + ++ S+ L GTL P +L +
Sbjct: 398 AMGNPDKYGRVIVTENSVSYMLLNPSLVFAQVAK-TAKSVCLVGGTLQPFSDLTAQLIDQ 456
Query: 457 LNFP----LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
+ P N HVI ++ + GP+ L +Y R + E+G + + ++
Sbjct: 457 NSIPEDRIFTHVNGHVILAENALTFCLHTGPNKEKLGFTYETRQNERLFDEIGQSCLELS 516
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHK---KPVVEPRQSSLFPL 569
+VP G++ FF S+ ++++ + S+ E+I HK K P
Sbjct: 517 CVVPGGIIYFFTSFDILNKAYKYIETKSYK------EKIENHKFILKETQNPNDLDKLMR 570
Query: 570 AIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
+ ++ K + T GAV FAV GK+SEG++FA+ R VV GMPF+ M D ++ +
Sbjct: 571 TFKSHIDKQRGDFT-GAVLFAVMNGKLSEGINFANDYCRCVVCVGMPFSNMNDMQISERM 629
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
++ D Q Q G +S G + R VNQ++GR R+ DY I DER+
Sbjct: 630 KFFD-QMQKDG-------ISSCGGRQFVENTCMRIVNQSIGRSFRNIKDYAVAILFDERY 681
Query: 690 AHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
K + WIQ + Q + D + ++ FF ++
Sbjct: 682 N--DHKQLLPGWIQRNYQDIQYWNDAMNSVKSFFNKK 716
>gi|22760335|dbj|BAC11156.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 171/293 (58%), Gaps = 20/293 (6%)
Query: 448 MDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNT 507
M SF+ EL + F +++E H++ + Q+W G + GP G L ++++N ++ E++ E+G
Sbjct: 1 MKSFSSELGVTFTIQLEANHIVKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGAL 60
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR--QSS 565
++++ + V G+L F PSY L+++ W +T +W + K +VEP+ + +
Sbjct: 61 LLSVCQTVSQGILCFLPSYKLLEKLKERWLSTG------LWHNLELVKTVIVEPQGGEKT 114
Query: 566 LFPLAIEDYMAKLK-DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
F ++ Y +K GA+ AVCRGKVSEGLDF+D RAV+ G+PF + D +
Sbjct: 115 NFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQ 174
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
V LKR+Y D ++ +G L G WY QA RA+NQA+GR IRHR+D+GA+I
Sbjct: 175 VELKRQYNDHHSKLRG---------LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALIL 225
Query: 685 CDERF-AHPSRK-SQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLK 735
D+RF +PSR S +S W++ IQ +S F + +L F ++ + + ++K
Sbjct: 226 VDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVLNVSIK 278
>gi|242087259|ref|XP_002439462.1| hypothetical protein SORBIDRAFT_09g007185 [Sorghum bicolor]
gi|241944747|gb|EES17892.1| hypothetical protein SORBIDRAFT_09g007185 [Sorghum bicolor]
Length = 590
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 157/590 (26%), Positives = 268/590 (45%), Gaps = 72/590 (12%)
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
+DIEDL IG+ G CPY+ +R++ ++ D+V PY L+ R+ LG+ KNS++I DE
Sbjct: 21 LDIEDLARIGKKIGTCPYYGSRDMIRSADLVVLPYQSLLLKSARESLGLNLKNSVVIIDE 80
Query: 243 AHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLL 302
AHNL + + ++S L +S ++ G ++ + L
Sbjct: 81 AHNLADSLTNMYNSKITSSQLKTVLSHLDEYLNRFHNVLGAANRRYIQT---------LT 131
Query: 303 KLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN 362
L + V IN ++ I + L L+I I+IV++ + ++E + +
Sbjct: 132 VLTRSFLRVLINKQDGASNMSSMTINQFLFSLDIDN------INIVKLC-QFVKESNIIH 184
Query: 363 KKSTTACRIESISNILKIIFRDKGTAHSA------YYRVHVREADANAADVLKGK--ASR 414
K S A ++ SI N I D+G++ + + R + + V K K
Sbjct: 185 KVSGYANKLTSIQNQFDIQLHDEGSSIACLQALVDFIRSLLNSNNDGRIIVAKQKLGGQP 244
Query: 415 TLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPLR----VENPHV 468
++ F A + FS + + ++IL GTL P++ L + P H+
Sbjct: 245 DEAYLKFVMLCAEKIFSEVTQDAYAVILAGGTLQPIEETRLRLCPSLPPTDIKFFTCNHI 304
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ + I V GPSG + SY +R S +ELG I NI +VP+G+++FF SY
Sbjct: 305 VPPESILPIAVTRGPSGMTFDFSYNSRSSPSMIEELGRFICNIITVVPEGVVMFFSSYDY 364
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL-------KDT 581
+ W + G ++ +I K K EPR S+ + Y + +DT
Sbjct: 365 ERRVYDAW--MTAGTIS----KISKKKHVFREPRNSADVEGVLNKYKETIESCSKISQDT 418
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKV---------------- 625
+GA+ AV GK+SEG++F++ GR V++ G+P+ + +D ++
Sbjct: 419 GVNGALLLAVVGGKISEGINFSNGMGRCVIMVGLPYPSPSDVELIETIKHIESISSSFLV 478
Query: 626 ----RLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
R+Y D + + Q G Y + G ++Y +AVNQ++GR IRH +DY A
Sbjct: 479 GDDKASSRKY-DDECELQPG-YDIFRKCTRGGREYYENLCMKAVNQSIGRAIRHINDYAA 536
Query: 682 IIFCDERFAHPSRKSQISL-------WIQPHIQCYSKFGDVVYTLTRFFR 724
++ D R+A S S WI+ + C +G+V +L +FF+
Sbjct: 537 MLLVDSRYAQTSSTKNFSCPTDKLPQWIKARLSCAQNYGEVHRSLHQFFK 586
>gi|17507137|ref|NP_493618.1| Protein DOG-1 [Caenorhabditis elegans]
gi|3876642|emb|CAB04262.1| Protein DOG-1 [Caenorhabditis elegans]
Length = 983
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 171/324 (52%), Gaps = 30/324 (9%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
T+S WC +P ++ + + E SI+L SGTL PMD+ EL + F +VE VI I
Sbjct: 661 TISLWCMSPALSFFD-AFNETRSIVLASGTLCPMDTLKTELGMEFKQQVEGDQVINKDNI 719
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIE--YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
+A ++P+GP G + +YRN E + ELG I + VP G+L F PSY ++DQ
Sbjct: 720 FAAVLPIGPFGNRIQCTYRNTSDPESSFYCELGAIIKYVCSNVPAGILCFLPSYRVLDQL 779
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----TSGAV 587
C S +I K + EPR+SS ++ + A + D S +G++
Sbjct: 780 KQCMIRNS------TMRQIEMKKVVLYEPRRSSELTSVMDQFDAAIFDPSRFGANINGSL 833
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
FAV RGKVSEG+DFAD R V+ G+P+ D +V K+ Y D ++ +G
Sbjct: 834 MFAVFRGKVSEGIDFADDRARVVISVGIPYPNAMDDQVNAKKLYNDQNSKEKG------- 886
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS-------RKSQISL 700
L+G++WY QA RA+NQA+GR +RH++D+GA++ DER + +++S
Sbjct: 887 --ILTGDEWYTTQAYRALNQALGRCLRHKNDWGAMLMIDERLERQTGNLVGGASSARVSK 944
Query: 701 WIQPHIQCYSKFGDVVYTLTRFFR 724
WI+ ++ Y F + F +
Sbjct: 945 WIRAQLKSYPSFKEFNANFREFIQ 968
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCI------HREVSLL---RGSA 145
I Y +RTH Q+ QV++E Y K IL SREQ CI H ++S SA
Sbjct: 240 IYYGTRTHKQIAQVVKEFSRLPYAKILKHTILASREQSCINPAARKHADISQYCKEVNSA 299
Query: 146 QNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGP--CPYFMT 203
+ C F K R + D+++ N G D+E +V P CPYF T
Sbjct: 300 HSIGCSF--KSAMKPRFEKALPLRDHLERN---GTVVFDMEKIVETLAISYPQLCPYFST 354
Query: 204 -RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
R L + DI+F P++YL+DP R V+ +NSI+I DEAHN+E C +AASF +
Sbjct: 355 NRILTQDADIIFCPFSYLVDPLIRNSSDVQIRNSIVILDEAHNIEDTCREAASFSFTEKE 414
Query: 263 LTACISE---AKNCIDISSTRRGQSSDETLNPD---NFAILRALLLKLEKRIAEV 311
L I + +D + G PD + R LL LE I E+
Sbjct: 415 LDDSILSLRIKRKAVDTELDKTGIEEKLLHIPDREVHLKEFRGHLLYLEHLILEM 469
Score = 47.4 bits (111), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 8 GIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
G+ V P Y Q + + +++ +L+N N L ESPTG+GKT+ LL +T AW K
Sbjct: 79 GVPVRVPRGLSLYSTQKLMIVRILTALKNSQNVLGESPTGSGKTMALLASTCAWLK 134
>gi|147789151|emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
Length = 914
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 193/746 (25%), Positives = 324/746 (43%), Gaps = 144/746 (19%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ-NNAC--- 150
I + SRTHSQL Q ++EL+ + + K+V LGSR+ CI+ EV L S + N C
Sbjct: 187 IYFCSRTHSQLSQFVKELRKTIFGNEMKVVCLGSRKISCINEEVLKLGNSTRINERCLEL 246
Query: 151 -----------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDE---------PIDIEDLVN 190
+ L +G RR S M N L + +DIEDLV+
Sbjct: 247 QQNKKKEVSKLKNLGSEGRIRRTKASSGCP--MLRNHKLQKQFRSEISQEGALDIEDLVH 304
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+GR G CPY+ +R + D+V PY L+ R+ LG+ KN+I+I DEAHNL
Sbjct: 305 LGRRMGTCPYYGSRSIIPAADLVVLPYQSLLSKSSRESLGLNLKNNIVIIDEAHNLADSL 364
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISST-----------RRGQSSDETLNPDNFAILRA 299
++S ++ + A + ++ T + Q L P N ++
Sbjct: 365 ISMYDAKITSIIVASERQVASLVLGVNLTILLEHVHSHIKQYLQRFRNFLGPGNRRYIQT 424
Query: 300 LLLKLEKRIAEVPINSKELGFTKPGP----------------YIYELLADLNITQETAYK 343
LL+ + + ++ +N K+ PG I + L LNI K
Sbjct: 425 LLV-VARAFLQILLNGKDTSLVDPGHDAEKAFGAKSASDSSMAINDFLFSLNIDNINLVK 483
Query: 344 LIDIVEVA------------------AELLQEDKLQNKKSTTACRIESISNILKIIFRDK 385
L+ ++ + L + N + +T + ++L+ + +
Sbjct: 484 LLHYIKESNIIHKVSGYGDKVANLXKGSALNDGGESNXEGSTLSGFRAFVDMLQSLTNND 543
Query: 386 GTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSG 443
G R A G+ L + + FS + + ++IL G
Sbjct: 544 GDGKIIISR---------AKQACSGQQGGYLKYVMLT---GEKIFSEIVDQAHAVILAGG 591
Query: 444 TLSPMDSFAQELKLNFP-LRVENPHVITSKQIW--AGIVPV----GPSGYLLNSSYRNRD 496
TL P++ + L FP L + H + I I+PV GPSG + SY +R
Sbjct: 592 TLQPIEETRERL---FPRLTSDQFHFFSCSHIIPPESILPVALSHGPSGQSFDFSYSSRS 648
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
S +ELG + N+ +VP+G+++FF S+ Q WK + I ERI K K
Sbjct: 649 SSIMIEELGLLLCNLVTVVPEGIVVFFSSFDYEGQVHDAWKASG------ILERIMKKKC 702
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTS----------TSGAVFFAVCRGKVSEGLDFADHA 606
EPR+++ +++Y + +S +GA+ AV GK+SEG++F+D
Sbjct: 703 VFREPRKNTDVEFVLKEYKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGM 762
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLD-----LQAQSQ----GGEY--KETKLSF----- 650
GR +V+ G+P+ + +D ++ + +Y++ + ++S G EY + ++ F
Sbjct: 763 GRCIVMVGLPYPSPSDIELLERVKYIEGLGVSISSRSTKFSVGNEYYSGDVQVGFDILRS 822
Query: 651 --LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER---------FAHPSRKSQIS 699
G+++Y +AVNQ++GR IRH +DY AI+ D R F+HP+ K +
Sbjct: 823 CKHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDARYASDPLKRSFSHPTNK--LP 880
Query: 700 LWIQP-HIQCYSKFGDVVYTLTRFFR 724
WI+ + K+G+ L +FF+
Sbjct: 881 QWIKDCLVPVTGKYGEAHRLLHQFFK 906
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+E Y Q+ +M+ + +SL ++LESPTGTGKTL ++C+ L W
Sbjct: 12 FPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQW 58
>gi|290983090|ref|XP_002674262.1| DNA repair helicase UVH6 [Naegleria gruberi]
gi|284087851|gb|EFC41518.1| DNA repair helicase UVH6 [Naegleria gruberi]
Length = 753
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 184/743 (24%), Positives = 325/743 (43%), Gaps = 133/743 (17%)
Query: 43 PTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
P+GTGKT+ LL +++ ++ G S+ ++Y +R
Sbjct: 2 PSGTGKTISLLSLITSYQ-------------------------LTEEGKSR--KLIYCTR 34
Query: 103 THSQLRQVIQELKT-SNYRPKM-------VILGSREQLCIH-REVSLLRGSAQ-NNACRF 152
T ++ +V++EL + YR K V L SR+ LCIH + S L AQ ++ CR
Sbjct: 35 TVPEMEKVLEELGSLIEYRKKYTDSPIIGVGLSSRKNLCIHPKSQSFLHDGAQVDSVCRG 94
Query: 153 LC--------------KKGTNR----------------RCNHHSRVADYMKNNPHLGDEP 182
L GT + CN+ R + + L +
Sbjct: 95 LTASWLRAEAKEKVESSNGTIQPVISNNNATATVDDIELCNYFERFIEANPTDTILPNGV 154
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFD 241
+ DL G+ G CPYF++R + ++V Y+YL+DP + NSI++FD
Sbjct: 155 YTMRDLKVFGKKKGWCPYFLSRRAIEYANVVVYSYSYLLDPKISSIISKNLPANSIVVFD 214
Query: 242 EAHNLEGICADAASFDLSSGLLTACIS----------------------EAKNCID-ISS 278
EAHN++ +C +A S ++ +L S E + +D + +
Sbjct: 215 EAHNIDNVCIEALSINIDRDILGVAKSNLTKLEENIANMEKVNSQRLQEEYRRLVDGLGA 274
Query: 279 TRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN-SKELGFTKPGPYIYELLADLNIT 337
G+SSD + D +L +L + VP N K F K ++ +N
Sbjct: 275 VGVGRSSDVIRSDDE--LLSNPVLPGDIMTEAVPGNIRKAHHFVK---FMKRFATHVNKR 329
Query: 338 QETAYKLIDIVEVAAELLQEDKLQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYY 393
+T + + E + E+ + +S C R+ S+ N L+I I+ G +
Sbjct: 330 LQTQKSVNETPEQFLNHVLENIDIDSRSLRFCSERLLSLMNTLEIKNIYEFNGIKIIMDF 389
Query: 394 RVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE--FSRLEVGSIILTSGT 444
+ +++ RT L + C + +A+ + F R + +++LTSGT
Sbjct: 390 ATLIGTYQEGFVIIIEPHDPRTPTNPDPVLQFSCMDASLAISKPIFGRFK--TVVLTSGT 447
Query: 445 LSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
LSP+D + + LK + +T + I ++ G + + YR R+ ++
Sbjct: 448 LSPLDMYPKLLKFKPIISKSLEMTLTRECICPLVLTRGSDQVAVTTKYRFRNDASVQRNY 507
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQS 564
G+ ++ +++ +PDG++ FF SY M+ ++ W N + I HK +E +
Sbjct: 508 GSLLLELSKYIPDGIVCFFTSYQYMEDIVSFW------NSVGLLSSITNHKLVFIETPNT 561
Query: 565 SLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+ +A+E+Y K D GA+FF++ RGKV+EG+DF H GR VV+ G+PF
Sbjct: 562 AETAIALENY-RKACDCG-RGAIFFSIARGKVAEGIDFDGHYGRCVVMIGVPFQNTESKI 619
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
++ + YL + +ET L+F A R +Q +GRVIR++ DYG ++
Sbjct: 620 LKARLNYL----RQNFAIKEETFLTF---------DALRHASQCIGRVIRNKADYGIMVL 666
Query: 685 CDERFAHPSRKSQISLWIQPHIQ 707
D+R+ P +++++ WI I+
Sbjct: 667 ADKRYNQPDKRNKLPKWIAKQIK 689
>gi|388580610|gb|EIM20923.1| DNA repair helicase [Wallemia sebi CBS 633.66]
Length = 776
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 182/733 (24%), Positives = 318/733 (43%), Gaps = 129/733 (17%)
Query: 43 PTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
P+GTGKT+ LL +A+++ D KL +Y SR
Sbjct: 2 PSGTGKTVSLLSLIVAYQQHY-------------------------DADRKL---VYCSR 33
Query: 103 THSQLRQVIQELK-TSNYRPKM-----------VILGSREQLCIHREVSL-LRGSAQNNA 149
T ++ + + ELK YR + L SR+ LC+H +S RG A +
Sbjct: 34 TVPEIEKALAELKRLMAYRADQGYAAKDSGYIGLGLSSRKNLCLHPSISQERRGKAVDAR 93
Query: 150 CRFLCKK----------GTNRRCNHH---SRVADYMKNNPHLGDEPIDIEDLVNIGRTFG 196
CR L G++ C++H S VA P + IED+ G+ G
Sbjct: 94 CRDLTSAHAVQKGRSDPGSHELCSYHEGLSEVAPGEIVPPGIWT----IEDVKKFGQQKG 149
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAAS 255
CPYF R + + + ++YL+DP + + E K++I++FDEAHN++ +C ++ S
Sbjct: 150 YCPYFSVRRMVPFCNTIIYSFHYLLDPKVAEMVSREMSKDAIVVFDEAHNIDNVCIESLS 209
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQ--SSDETLNPDNFAIL---------------- 297
DL+ + + A +D S + + +D D +A L
Sbjct: 210 IDLTRPM----LESASRSVDKLSEKIAEVKENDAQRLQDEYAKLVEGMQDADQPPPAAND 265
Query: 298 -RALLLKLEKRIAEVPINSKEL------GFTKPGPYIYELLADLNITQETAYKLIDIV-E 349
A++ + ++ + P+ +L G + + L +T +++ +V E
Sbjct: 266 EMAMIRRQDEDVLSNPVLPADLLKEAIPGNIRKAEHFVSFLKRFVEYLKTRMRVLHVVAE 325
Query: 350 VAAELLQEDK---LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVH-----VREAD 401
LQ + +K C + +SN++K + ++ +SA V V +
Sbjct: 326 TPLSFLQHLRDITYIERKPLRFCS-DRLSNLIKTLELERLDEYSALQSVAAFATLVSTYE 384
Query: 402 ANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQ 453
+L+ S T C + IA+ F R S+I+TSGT+SP+D + +
Sbjct: 385 KGFLLILEPFESETATIPNPIFHLTCQDASIAIAPVFERF--SSVIITSGTISPLDMYPK 442
Query: 454 ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
L N ++ P ++ ++ G ++S + R+ + G ++ ++
Sbjct: 443 MLNFNAIVQESYPMTLSRNCFIPMVITRGSDQVAVSSRFEVRNDPAVVRNYGQMLIEYSK 502
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
++PDG++ FFPSY M+ ++ W N I + + KHK VE + +A+E+
Sbjct: 503 VIPDGIVAFFPSYLYMESIVSAW------NEMQILDEVWKHKLIFVETPDAPETSIALEN 556
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
+ + GAV +V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL
Sbjct: 557 FRKACDN--GRGAVMLSVARGKVSEGIDFDHHFGRAVIMFGVPYQYTESRILKARLEYL- 613
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+E+ D+ A R Q VGRV+R + DYG +IF D+RFA
Sbjct: 614 ----RDNHRIRES--------DFLTFDAMRHAAQCVGRVLRGKSDYGLMIFADKRFARSD 661
Query: 694 RKSQISLWIQPHI 706
+++++ WI +I
Sbjct: 662 KRAKLPRWINQYI 674
>gi|242814468|ref|XP_002486375.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714714|gb|EED14137.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 860
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 196/751 (26%), Positives = 339/751 (45%), Gaps = 107/751 (14%)
Query: 41 ESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYT 100
ES T TGK++ + + S + + L + +++GS+ S N +++ I Y
Sbjct: 147 ESDTETGKSVRIPGFSDIEGLSASTVALL-DRFKGRVTGSKESENDNENQ----TRIYYC 201
Query: 101 SRTHSQLRQVIQELKT----SNYRP-------------------KMVILGSREQLCIH-R 136
SRTHSQL Q QEL+ S+ P K + LGSR+QLCI+ R
Sbjct: 202 SRTHSQLSQFAQELRRVTLPSSLPPLQENADAEQKEHAELEEVIKHLTLGSRKQLCINPR 261
Query: 137 EVSLLRGSAQNNACRFLCKKGT--NRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVN 190
++L +A N C L + G +++C++ R ++ D + DIED+
Sbjct: 262 VLNLGNATAINERCMELQQSGVAADKKCSYLPR-KEFEDVQLDFRDRVLSTVQDIEDITQ 320
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ CPY+ R++ +I+ PY L+ R+ L + ++ ++I DEAHNL
Sbjct: 321 VGKQLSICPYYAARKVIDQCEIITLPYPLLLQRSSREALDLSLRDHVVIIDEAHNLMDAI 380
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAE 310
++ S ++ L + + + R+ Q+ + N R + ++ + ++
Sbjct: 381 SNIHSVSVTLDQLRTSLFQL-----TTYARKFQTRLKGKN-------RVYVTQVIRLVSA 428
Query: 311 VPINSKELGFTKPGPYIYELLADL----NITQETAYKLIDIVEVAAELLQEDKLQNKKST 366
+ N + L +DL + Q YKL LQE KL K
Sbjct: 429 LAENLQSLSQKHKSSEAVVQYSDLVSGKGVDQINPYKL-------TRYLQESKLARK--- 478
Query: 367 TACRIESISNILKII-----FRDKGTAH-----SAYYRVHVREADANAADVLKGKASRTL 416
+E +N I RDK T ++ + +D + K L
Sbjct: 479 VDGYVEHANNKNDKIASGKETRDKTTVPVLFQVQSFILTLMNPSDEGQLFLNKTDGGVIL 538
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-------KLN-FPLRVENPHV 468
+ +P ++ E ++IL GT+SPM +A L KL+ F HV
Sbjct: 539 RYMLLDPTNHFRDIVD-EARAVILAGGTMSPMSDYADHLFSYLSSAKLDTFSF----GHV 593
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I K + A I+ G G N + R S +LG TI N+ ++PDG++ FFPSY
Sbjct: 594 IPPKNLTARILAKGVLGNDFNFIFDQRTSDSMITDLGQTIANLCAVIPDGVVAFFPSYDY 653
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVV-----EPRQSSLFPLAIEDYMAKLKDTST 583
++Q + W+ S +I+ I K +KP+V + ++S+ + +E Y K++ S
Sbjct: 654 LNQVLNTWRKPSKTG-GSIFAEIEK-RKPIVYESNNQKKESNTDDVLLE-YSKKVE--SG 708
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ-----AQS 638
SGA+ +V G++SEG++F+D GR V+I G+PF + + K +++ Q Q+
Sbjct: 709 SGALLLSVVGGRLSEGINFSDKLGRGVLIVGLPFPNIHSAVWKAKIGHIEKQTFAKLTQN 768
Query: 639 QG----GEYKETKLSF-LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ + +E +++ +G D++ RAVNQ +GR IRHR+DY AI+ D R+
Sbjct: 769 ESELPVSKRREAEITAKAAGRDFFENSCMRAVNQCIGRAIRHRNDYAAIVLIDRRYETQR 828
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+ ++ WI+ + S ++ L FF+
Sbjct: 829 IQEKLPAWIRQSL--VSSTSNIREGLRSFFK 857
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
P+ YD QL +M + ++ + ESPTGTGK+L L+C L W
Sbjct: 8 PYTPYDIQLEFMSALYDCIEAGKVGIFESPTGTGKSLSLICGALTW 53
>gi|341901524|gb|EGT57459.1| CBN-DOG-1 protein [Caenorhabditis brenneri]
Length = 987
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 176/326 (53%), Gaps = 36/326 (11%)
Query: 415 TLSWWCFNPGIAM-QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
++S WC +P ++ FS E SIIL SGTL PMD+ EL + F +VE VI+
Sbjct: 665 SVSLWCMSPALSFFDAFS--ETRSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPDN 722
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIE--YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
I+A ++P+GP G + ++RN + + E+G+ I + VP G+L F PSY +++Q
Sbjct: 723 IFAAVLPIGPHGNRVQCTFRNTSDPDSPFYSEVGSIIKYVCSNVPAGILCFLPSYRVLEQ 782
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT-----STSGA 586
C NL+ ++I K + EPR+SS ++ + A + + + +GA
Sbjct: 783 LKTCMTR----NLSM--KKIETKKVVLFEPRRSSELSNVMDQFDAAIFNPKNFGPTINGA 836
Query: 587 VFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET 646
+ FAV RGKVSEG+DFAD R V+ G+P+ D +V K+ Y D+ ++ G
Sbjct: 837 LMFAVFRGKVSEGIDFADDRARVVISVGIPYPNAMDDQVNAKKSYNDMNSKEMG------ 890
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ-------IS 699
L+G++WY QA RA+NQA+GR +RH++D+GA++ DER + Q +S
Sbjct: 891 ---ILTGDEWYTTQAYRALNQALGRCLRHKNDWGAMLMIDERLERQTGNLQSGAVSARVS 947
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFFRE 725
WI+ ++ Y F T FRE
Sbjct: 948 KWIRAQLKSYPSFK----TFNASFRE 969
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 92/175 (52%), Gaps = 15/175 (8%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ-----NNA 149
I Y +RTH Q+ QV++E Y K IL SREQ CIH +Q N+A
Sbjct: 246 IYYGTRTHKQIAQVVKEFSRLPYANIIKHTILASREQSCIHPTARKQPDISQYCKEINSA 305
Query: 150 CRFLCKKGTNRRCNHH--SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGP--CPYFMT-R 204
C TN R + + D+++NN G DI+++V T P CPYF T R
Sbjct: 306 NGIGCTFKTNMRPRFEKAAPMRDHLQNN---GTVVFDIDEVVETLATSYPQLCPYFSTNR 362
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
L + D++F P++YL+DP R V KNS++I DEAHN+E C DAASF +
Sbjct: 363 ILTQDADLIFCPFSYLVDPLIRNSSDVTIKNSVVILDEAHNIEDTCRDAASFTFT 417
Score = 47.0 bits (110), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 9 IDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
+ V FP Y Q + + +++ +L+N N L ESPTG+GKT+ LL +T AW K
Sbjct: 83 VPVRFPQGMSLYPTQKLMIVRILAALKNSQNVLGESPTGSGKTMALLSSTCAWLK 137
>gi|341878721|gb|EGT34656.1| hypothetical protein CAEBREN_18601 [Caenorhabditis brenneri]
Length = 830
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 178/680 (26%), Positives = 286/680 (42%), Gaps = 92/680 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCK 155
I Y SRTHSQL Q+I+EL+ + ++P++V GSR LC++ EV L+ N C L K
Sbjct: 183 IFYASRTHSQLDQLIEELEKTRFQPRVVTCGSRGTLCVNDEVMKLKLNHLINEKCMELRK 242
Query: 156 KGTNRR-------------------CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFG 196
GT+ + C +++ N L ++ L + G
Sbjct: 243 NGTSEKEKKQKTEEGSKKKKSCATSCEYYNSTQIEELVNGVLANKFKTSAQLKSQGSASH 302
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
CPYF TR+ +V PY L+ R G++ K++++I DEAHN+
Sbjct: 303 GCPYFATRKSIPQCQLVLLPYQVLLHEGTRNAWGIDLKDNVIILDEAHNV---------L 353
Query: 257 DLSSGLLTACISEAKNCIDISSTRR-GQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
+ L +A ISE + + R + L N ++ L K I + S
Sbjct: 354 STINSLYSAEISEKSLALALKLIREYNEKYKLRLKAKNLLYMKQLEQLTSKMITFLKSES 413
Query: 316 KELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA-------AELLQEDKLQNKKSTTA 368
KE T + +L +LNI +KL +E +Q + + KK
Sbjct: 414 KEDVMT-----MAQLSRNLNILGINLFKLATYIEKTDLCKKFHGFYVQFQRNEVKKENEK 468
Query: 369 CRIESISNIL-KIIFRDKGTAHSA-------------YYRVHVREADANAAD---VLKGK 411
++ I +L K + + TA + + + D ++
Sbjct: 469 PKLTGIQKLLAKKDEKPEETAEESEPAPPKTVSSPLFSLKSFIDSLTNKCEDGRIIVDKT 528
Query: 412 ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL-----NFPLRVENP 466
A + NP + E + S +L GT+ P + L + R
Sbjct: 529 ADPKFRYILLNPADRLAEVLKA-CRSTVLVGGTMEPAQLLVETLSRGSIGPDSIRRFSCS 587
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HVI Q+ A + G +Y+ R E + L +I +++ +P+G++IF PSY
Sbjct: 588 HVINDSQLLAVTINKTVDGKPFRLTYQTRSLPETLKSLARSIQVLSQHLPNGVVIFVPSY 647
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS-- 584
+ ++ T I E+I + K E RQS+ D + + + +
Sbjct: 648 DFL------FELKKKMIETKILEQIERKKSVFTETRQST------SDVFKRFSEAAKTPK 695
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
GA+FFAV GK+SEG++F+D GRAV++ G+PF T ++R + +LD Q +
Sbjct: 696 GAIFFAVIGGKMSEGINFSDELGRAVIVIGLPFPNKTSVELRERMRFLDSQMPN------ 749
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQP 704
G Y AVNQA+GR IRHR+DY A+ DERF+ S KS++S WI
Sbjct: 750 -------GGNMLYESLCMHAVNQAIGRAIRHRNDYAAVYLFDERFSQDSIKSKLSSWIGD 802
Query: 705 HIQCYSKFGDVVYTLTRFFR 724
Q F +++ FF+
Sbjct: 803 RTQTNLGFTEIIQKSQAFFK 822
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF+ YD QL M ++ L+ + ESPTGTGK+L +LC+T+ W
Sbjct: 6 FPFKPYDIQLRLMREIRDCLEQGKVGIFESPTGTGKSLSVLCSTMTW 52
>gi|440491198|gb|ELQ73865.1| Helicase of the DEAD superfamily, partial [Trachipleistophora
hominis]
Length = 867
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 257/537 (47%), Gaps = 71/537 (13%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M KI I++ FPF+ Y Q++ K+I L+NK ++ESPTGTGK++ +LCA LAW
Sbjct: 4 MHKMKINSINITFPFKPYPAQILTCSKIIDCLKNKKTGIIESPTGTGKSIAILCAVLAWH 63
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ ++ I SRTH QL Q++ +L+ + Y
Sbjct: 64 AT-----------------------------NRSTRIFICSRTHKQLDQLVAQLRATAYA 94
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
PK+ +L SR LC++++ L+G N +CR L KKG R R+A +GD
Sbjct: 95 PKVCVLASRRALCLNKQA--LKGDV-NASCRDLVKKGECRYFMGKERLA------KSIGD 145
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
DIE+L G CPY+ +R L + I F PYNY++DP R+ +G+E K+S++I
Sbjct: 146 VH-DIEELRQAGERCTGCPYYASRMLSEDAAITFMPYNYVVDPMVRRTMGIELKDSVVIV 204
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHN+E C A S +L++ + + E + RR + E L N+ LR +
Sbjct: 205 DEAHNIEDACRSAGSIELTNDTIDIMLKEL-----VGVYRRVEEYREDLVVLNY-FLRKM 258
Query: 301 LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
+ ++ +S+ F G I + LA +E +LI + + A + + L
Sbjct: 259 RGLSDVKMTRSSADSECACF--KGDEIVQHLAH----KEVVPELIARMRMNALFKKNEDL 312
Query: 361 QNKKSTTACR-IESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASR-TLSW 418
++ S + +ES+ ++L ++F K ++ A ++KG S +L++
Sbjct: 313 KDAFSLVFLQTMESLVSVLMLVFSGKARSY---------------ALIVKGAPSAPSLNF 357
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGI 478
+ + + V ++++ SGTL+P + EL +F + P + A I
Sbjct: 358 MLLDADVMFNAVVQ-HVHALVVLSGTLTPFSAVENELNHHFTYSLVAP-AVAQHTFCATI 415
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP-DGLLIFFPSYYLMDQCIA 534
+ +G + +Y + +EY E+ + I ++ V G ++F PSY+ +++ ++
Sbjct: 416 LRNARTGGDMLGTYAYAECLEYVDEVIDVIYGVSGCVQGGGTVVFLPSYHAVNKVVS 472
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 23/136 (16%)
Query: 587 VFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET 646
+ AV RGK SEG DF D RAV++ GMP + + V L R +
Sbjct: 622 ILLAVYRGKASEGTDFKDKLARAVILVGMPCPNIKEIGVELMRNHR-------------- 667
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
WY Q +AVNQA+GR +RHR D+G + D R+ K ++ W + +
Sbjct: 668 -------PGWYENQIFKAVNQAIGRCVRHRMDWGGVFLVDVRYRRD--KDRLCGWCRDRM 718
Query: 707 QCYSKFGDVVYTLTRF 722
FGDVV F
Sbjct: 719 VYGEYFGDVVDDFREF 734
>gi|312091190|ref|XP_003146892.1| hypothetical protein LOAG_11323 [Loa loa]
Length = 438
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 163/269 (60%), Gaps = 10/269 (3%)
Query: 11 VEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLG 70
VEFPFE Y+CQ+ +MEKV+++L NA LESPTGTGKTLCLLCA +A+ L + +
Sbjct: 11 VEFPFEPYECQIKFMEKVVEALWTGQNAALESPTGTGKTLCLLCAAIAF---LKDYKSRI 67
Query: 71 SQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSR 129
SQ+++ I + +V + S + P ILY SRTHSQL QVI EL + Y+ K V L SR
Sbjct: 68 SQMDS-IMKYKVTVPALLSHN---PKILYASRTHSQLAQVISELNKTTYKDIKTVTLASR 123
Query: 130 EQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-DIED 187
+ LCI+ +V S ++ CR L K N + + + + G+ + DIE+
Sbjct: 124 DILCINDKVMKENSSHVKSLMCRNLISKHQCPFYNSYEKADPSTLDLLYNGNGLVPDIEE 183
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
++NI + CPYF R + + D++ PYNY++DP R ++ K +I+IFDEAHNLE
Sbjct: 184 VINISQKHRYCPYFRNRTVYENADLILLPYNYIVDPSLRHKHNIQLKGNIVIFDEAHNLE 243
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDI 276
IC ++ S S+ ++ACI EAK +++
Sbjct: 244 SICEESTSVSFSTTQISACIREAKKVLEM 272
>gi|342871641|gb|EGU74151.1| hypothetical protein FOXB_15338 [Fusarium oxysporum Fo5176]
Length = 761
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 186/736 (25%), Positives = 318/736 (43%), Gaps = 122/736 (16%)
Query: 29 IQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQ 88
+Q+L + +LE P+GTGKT+ LL +A+++ + L
Sbjct: 1 MQTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYMPEKRKL------------------- 41
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREV 138
+Y SRT S++ + + ELK+ YR + + L SR+ LC+H V
Sbjct: 42 ---------IYCSRTMSEIEKALVELKSLMKYRAEQLGYEEEFRGLGLTSRKNLCLHPSV 92
Query: 139 SLLRGSAQNNA-CRFLC--------KKGTNRR-CNHHSRVADYMKNNPHLGDEPIDIEDL 188
+ A +A CR L ++G N C +H + D ++ + + + +D+
Sbjct: 93 KREKSGAIVDARCRSLTAGFVKEKKERGENVDVCVYHDNL-DLLEPHNLIPNGVWSFDDM 151
Query: 189 VNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLE 247
+ G CPYF R + + ++V Y+YL+DP + + ++ K+ I++FDEAHN++
Sbjct: 152 IRYGEEHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNID 211
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRG-----------------QSSDETLN 290
+C ++ S D++ L A+N + S R + +DE
Sbjct: 212 NVCIESLSTDITEDSLRKATRGAQNLENKISQMRDTDQQQLQNEYEKLVQGLRDADEARQ 271
Query: 291 PDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQ---ETAYKLIDI 347
D F AL L K I E +I L + + Q ET +
Sbjct: 272 EDAFMANPALPEDLLKEAVPGNIRRAEHFIAFLKRFIEYLKTRMKVRQVISETPPSFL-- 329
Query: 348 VEVAAELLQEDKLQNKKSTTAC--RIESISNILKII-------------FRDKGTAHSAY 392
L+E KK C R+ S+ L++ F +
Sbjct: 330 -----AHLREHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKG 384
Query: 393 YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSF 451
+ + + +++ A+V + L + C + IA++ F R S+I+TSGT+SP++ +
Sbjct: 385 FLLILEPFESDTAEV----PNPVLHFTCLDAAIAIKPVFDRFY--SVIITSGTISPLEIY 438
Query: 452 AQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNI 511
+ L + ++ + + IV G +++S++ R+ + GN +
Sbjct: 439 PKMLDFSTVIQESYAMTLARRSFMPMIVTRGSDQASVSTSFQVRNEPSVVRNYGNLLTEF 498
Query: 512 ARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAI 571
A+I PDG+++FFPSY M+ I+ W+ G L +W K+K +VE + LA+
Sbjct: 499 AKITPDGMVVFFPSYLYMESIISMWQGM--GILDEVW----KYKLILVETPDAQETSLAL 552
Query: 572 EDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY 631
E Y + GAV V RGKVSEG+DF GR V+ G+PF T+ ++ R
Sbjct: 553 ETYRTAC--CNGRGAVLLCVARGKVSEGIDFDHQYGRTVLCIGVPF-QYTESRILKAR-- 607
Query: 632 LDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAH 691
LQ + KE D+ + A R Q +GRV+R + DYG ++ D RF
Sbjct: 608 --LQFLRETYRIKEN--------DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQ- 656
Query: 692 PSRKSQISLWIQPHIQ 707
++SQ+ WI +Q
Sbjct: 657 -KKRSQLPKWINQGLQ 671
>gi|308499723|ref|XP_003112047.1| CRE-RTEL-1 protein [Caenorhabditis remanei]
gi|308268528|gb|EFP12481.1| CRE-RTEL-1 protein [Caenorhabditis remanei]
Length = 535
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 158/294 (53%), Gaps = 14/294 (4%)
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
V +++L SGTLSP+ +F + LNF +EN H + + IV G G L S++N
Sbjct: 9 VRNVLLASGTLSPIQAFTYNMGLNFGAILENEHALKQVPVLTSIVTRGKHGGL-TGSFQN 67
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNT-SHGNLT-TIWERIC 552
R ++ Y ++ ++ + P G+L+FF SY MD+ +A WK S N T T W R+
Sbjct: 68 RKNVNYVSDVAEALIRVMEATPQGILVFFSSYSQMDELVATWKTMKSAANSTDTFWARME 127
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K K+ VVEPR Y + + GA AVCRGKVSEG+DF D RAV+I
Sbjct: 128 KSKRVVVEPRAKEELAAVRLKYTQGVSEPH--GAALLAVCRGKVSEGIDFCDAESRAVII 185
Query: 613 TGMPFATMTDPKVRLKREYL-DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
G+P+ + D +V LK++YL DL + K+ S DWY +A RAVNQA+GR
Sbjct: 186 VGIPYPPIHDERVVLKKKYLDDLMGRKDVTHEKQ------SSTDWYQMEAFRAVNQAIGR 239
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
V+RH++D+G ++ D R+A ++ W++ I + RFF+E
Sbjct: 240 VLRHKNDFGTVVLLDTRYAT-AKPEMFPKWLRSTISRMDS-DNCALKTARFFKE 291
>gi|344303265|gb|EGW33539.1| ATP-dependent RNA helicase CHL1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 816
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 176/658 (26%), Positives = 302/658 (45%), Gaps = 67/658 (10%)
Query: 95 PT-ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREV-SLLRG 143
PT I Y SRTHSQL Q +L+ + + R K + LGSR+QLCI+ +V S +
Sbjct: 188 PTKIFYCSRTHSQLNQFAGQLRLTKFESSFDDLQERTKYLPLGSRKQLCINDKVRSQVTV 247
Query: 144 SAQNNACRFLCKKGTNRRCNHHSRV-ADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYF 201
+ N+AC L K + + V +D +K L I DIEDL +G CPY+
Sbjct: 248 QSMNDACIDLQKSKEGCKFLPKNYVDSDLVKEFSELSVAKIRDIEDLGILGTDLNVCPYY 307
Query: 202 MTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSG 261
R + +I+ PY + R + ++ K+SI+I DEAHN+ + S +++
Sbjct: 308 SVRGGIELTEIISLPYQMIFQDSTRDIMKLDVKDSIVIIDEAHNIMDVITSLYSVSITAD 367
Query: 262 LLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFT 321
L I K + G+ + LN N L+ L+ K+ + + IN K G
Sbjct: 368 NLDRVIKSLKFYL-------GKFI-KKLNSGNRINLQKLI-KICQSLRNF-INDKS-GKV 416
Query: 322 KPGPYIYELLADLNITQETAYKLIDIVEVAAEL------------LQEDKLQNKKSTTAC 369
KPG E+ D +I Q++ L++I ++ L L++ +++N+ +TT
Sbjct: 417 KPGD---EINVD-DIFQDSTADLVNIHKLEKFLSKTKIAYKIENYLEKIEIENETNTTIR 472
Query: 370 RIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE 429
S + ++ K H + + N T+++ +P ++
Sbjct: 473 SSSSTPLLFSVVSFLKSLTHPSTEGKFFWDVTNNTT---------TINYMLLDPSGVFKD 523
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLN-FPLRVEN---PHVITSKQIWAGIVPVGPSG 485
+ I+L GT+ PM +A L + P +V HVI + + V +G
Sbjct: 524 ILN-QAKCILLCGGTMEPMSDYADYLFPSVLPEKVNKFTCGHVIPKENLDVFTV-TEMNG 581
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
S+ R++ LG+ I+ + + VP G++IFFPSY ++Q + WK ++
Sbjct: 582 IDFEFSFNKRNNAVQLNALGSFIIEVCKRVPYGIVIFFPSYKYLNQVLMEWKKSN----- 636
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
+ I + K EP ++ + +Y + GA+ F+V GK+SEG++F+D+
Sbjct: 637 -LLNSISQLKSVFQEPSDATKVEQTLSEYSTAAQ---AKGAILFSVVGGKMSEGINFSDN 692
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
RAV++ G+P+ ++ KR +++ S+GG E K + ++Y RAV
Sbjct: 693 LARAVLMVGLPYPNAFSGEMVAKRNFIEKNVISKGGTNNEAKEKSM---NYYENLCMRAV 749
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
NQ++GR IRH DY I D RF +P + ++S W++ +Q + + FF
Sbjct: 750 NQSIGRSIRHIKDYSIIYLIDSRFKYPRIQIKLSKWVRDRLQATNNTSQIFNQTEEFF 807
Score = 47.0 bits (110), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAW 59
P++ Y Q+ M V ++ N + ESPTGTGKTL L+C+++ W
Sbjct: 13 PYDPYTIQIQLMNAVYDTISNDYKIGIFESPTGTGKTLSLICSSMTW 59
>gi|393904464|gb|EFO17178.2| hypothetical protein LOAG_11323 [Loa loa]
Length = 449
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 163/269 (60%), Gaps = 10/269 (3%)
Query: 11 VEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLG 70
VEFPFE Y+CQ+ +MEKV+++L NA LESPTGTGKTLCLLCA +A+ L + +
Sbjct: 11 VEFPFEPYECQIKFMEKVVEALWTGQNAALESPTGTGKTLCLLCAAIAF---LKDYKSRI 67
Query: 71 SQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSR 129
SQ+++ I + +V + S + P ILY SRTHSQL QVI EL + Y+ K V L SR
Sbjct: 68 SQMDS-IMKYKVTVPALLSHN---PKILYASRTHSQLAQVISELNKTTYKDIKTVTLASR 123
Query: 130 EQLCIHREVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-DIED 187
+ LCI+ +V S ++ CR L K N + + + + G+ + DIE+
Sbjct: 124 DILCINDKVMKENSSHVKSLMCRNLISKHQCPFYNSYEKADPSTLDLLYNGNGLVPDIEE 183
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
++NI + CPYF R + + D++ PYNY++DP R ++ K +I+IFDEAHNLE
Sbjct: 184 VINISQKHRYCPYFRNRTVYENADLILLPYNYIVDPSLRHKHNIQLKGNIVIFDEAHNLE 243
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDI 276
IC ++ S S+ ++ACI EAK +++
Sbjct: 244 SICEESTSVSFSTTQISACIREAKKVLEM 272
>gi|410076050|ref|XP_003955607.1| hypothetical protein KAFR_0B01730 [Kazachstania africana CBS 2517]
gi|372462190|emb|CCF56472.1| hypothetical protein KAFR_0B01730 [Kazachstania africana CBS 2517]
Length = 809
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 187/663 (28%), Positives = 304/663 (45%), Gaps = 87/663 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY------------RPKMVILGSREQLCIHREVSLLRG- 143
I + SRTHSQL Q +L+ + R K + LGS++QLCI V +
Sbjct: 197 IYFASRTHSQLNQFASQLRLPTFPSSFDKNLVPSERIKYLPLGSKKQLCIEPSVKKWKTL 256
Query: 144 SAQNNACRFL------CKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGP 197
A N+AC L C TN H S + ++N + + DIEDLV++G T
Sbjct: 257 EAINDACSELRHSKDGCPYYTNTTEWHQSLANNTFRDN--IFAKVHDIEDLVSLGETLHI 314
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
CPY+ +R+ V+IV PY YL+ R+ + ++ +NSI+I DEAHNL S +
Sbjct: 315 CPYYASRDHLDGVEIVTLPYQYLLSEQTRRIMNLDLQNSIVIIDEAHNLIDTINSIHSNE 374
Query: 258 LSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE 317
+S L C + ++ R LNP N R +LKL K I V I
Sbjct: 375 VSLAELKICNKGLQLYLNNFKKR--------LNPGN----RVNILKLIKLI-NVFIEFIT 421
Query: 318 LGFTKPGPYIYELLADLN-ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISN 376
FTKPG I D+N I T +++I +++ + +Q ++ K T RI+ +
Sbjct: 422 KKFTKPGIKI-----DINDIMTGTNTDVLNIHKLS-KYIQTSRIAYKIDTYLVRIKDKLD 475
Query: 377 ILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQ-------- 428
II + ++V ++ L +S + F G AM+
Sbjct: 476 PTLII---NSKSQPLLFKV------SSFLSSLNNPSSE--GQFFFEKGPAMKYMLLEPNK 524
Query: 429 EFSRLEVGS--IILTSGTLSPMDSFAQELKLNFP----LRVENPHVITSKQIWAGIVPVG 482
+F + GS +IL GT+ P+ F L P ++ H+I + IV
Sbjct: 525 QFESIVNGSLKVILAGGTMEPVSDFYDNLFPQIPKNEAVKFSCDHIIPDSNLNTFIVD-R 583
Query: 483 PSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD--GLLIFFPSYYLMDQCIACWKNTS 540
S + R D+ +L N I +++ VP G+++F PSY + I WK
Sbjct: 584 ESNFEFTFGKRT-DAQLINADLYNFITKLSQNVPKNGGIIVFLPSYQYLKTVIDNWKQNG 642
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
++++ + +K E + + ED ++K + G+V FAV GK+SEG+
Sbjct: 643 ------TFDKLNQIRKIFYESKDN-------EDPLSKYIECVQDGSVLFAVVGGKLSEGI 689
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
+F D+ RA+V+ G+PF + ++ +KR +++ + GG KE K + +++
Sbjct: 690 NFQDNLCRALVMVGLPFPNVFSGELTIKRAHIEEKTIRNGGTQKEAK---EATKEFLENI 746
Query: 661 ASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLT 720
+AVNQ VGR IRH +DY I D+R+ + + + ++S W++ IQ + D + T
Sbjct: 747 CMKAVNQCVGRAIRHANDYSNIYLLDKRYNNDNIRDKLSNWVKRRIQKDNSV-DAIMNAT 805
Query: 721 RFF 723
R F
Sbjct: 806 RSF 808
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN--ALLESPTGTGKTLCLLCATLAW 59
PF+ YD QL M+ + +L +K A+LESPTGTGKTL L+C+T+ W
Sbjct: 15 PFKPYDIQLELMQCIYDTLSDKTKKIAILESPTGTGKTLSLICSTITW 62
>gi|308485824|ref|XP_003105110.1| CRE-DOG-1 protein [Caenorhabditis remanei]
gi|308257055|gb|EFP01008.1| CRE-DOG-1 protein [Caenorhabditis remanei]
Length = 1008
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 183/349 (52%), Gaps = 39/349 (11%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
T+S WC +P ++ + FS E SIIL SGTL PMD+ EL + F +VE VI+
Sbjct: 683 TISLWCMSPALSFYDAFS--ETRSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPDN 740
Query: 474 IWAGIVPVGPSGYLLNSSYRNRD--SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
I+A ++P GP G + ++RN S + +E+ + I + VP G+L F PSY +++Q
Sbjct: 741 IFAAVIPFGPHGNRITCTFRNTSDPSSPFYEEIASIIKYVCMHVPAGILCFLPSYRVLEQ 800
Query: 532 CIACW-KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD-----TSTSG 585
C +N S ++ T K + EPR+SS ++++ + + S +G
Sbjct: 801 LKTCMLRNHSMKHIQT-------KKVVLFEPRKSSELTAVMDEFDSAIFHPTNFGESING 853
Query: 586 AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKE 645
A+ FAV RGKVSEG+DFAD R V+ G+P+ D +V K+ Y D ++
Sbjct: 854 ALMFAVFRGKVSEGIDFADDRARVVISVGIPYPNAMDDQVNAKKSYNDQNSKD------- 906
Query: 646 TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK-------SQI 698
L L+G++WY QA RA+NQA+GR +RH++D+GA++ D+R + K +++
Sbjct: 907 --LGILTGDEWYTTQAYRALNQALGRCLRHKNDWGAMLLIDDRLERQTEKIMTGATSARV 964
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVSGDVRE 747
S WI+ ++ Y F F I G N+ +K E V E
Sbjct: 965 SKWIRAQLKNYRDFKQFNQNFRVF-----IEGRQNVNNVKKEKEDIVDE 1008
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 27/181 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIH-------------REVSLL 141
I Y +RTH Q+ QV++E Y K IL SR+Q CIH +E++
Sbjct: 239 IYYGTRTHKQIAQVVKEFSRLPYANIIKHTILASRDQSCIHPLARKQPDISQFCKEIN-- 296
Query: 142 RGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGP--CP 199
SA C F K + + D+++NN G DIE +V P CP
Sbjct: 297 --SANGIGCSF--KSAMRPKFEKAQPLRDHLRNN---GSVVFDIEQVVETLALSYPQICP 349
Query: 200 YFMT-RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
YF T R L + D++F P++YL+DP R V KNSI+I DEAHN+E C DAASF
Sbjct: 350 YFSTNRVLTQDADLIFCPFSYLVDPLIRNSSDVHIKNSIVILDEAHNIEDTCRDAASFSF 409
Query: 259 S 259
+
Sbjct: 410 T 410
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 6 IRGIDVEFP--FEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
++ + V +P Y Q + + ++I+++QN N L ESPTG+GKT+ LL +T AW K
Sbjct: 75 MQSVPVRYPKGLTLYPTQKLMIVRIIKAIQNSENVLGESPTGSGKTMALLSSTCAWLK 132
>gi|452822429|gb|EME29448.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 788
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 182/661 (27%), Positives = 292/661 (44%), Gaps = 69/661 (10%)
Query: 93 KLPTILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLL-R 142
+LP I Y SRTHSQL Q +E+K + RP ++IL SR+ LCI+ +VS L
Sbjct: 168 ELPRIYYCSRTHSQLLQFQEEVKRTIANMQWSEKVPRPSVLILSSRKNLCINEKVSSLSN 227
Query: 143 GSAQNNACRFLCKK--GTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPY 200
+ N C L K G+ C ++ + + HL E +DIE+LVN+G+ CPY
Sbjct: 228 ANLINERCMELTSKEPGSPGCCPYYHLEGQRILRD-HLSSEIVDIEELVNLGKERRACPY 286
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK-NSILIFDEAHNLEGICADAASFDLS 259
+ + K+ + PY L+ R+ L + N I+IFDEAH++ D + +
Sbjct: 287 YGMKRAIKSSQFILLPYQSLLHKPTRESLRLPLHSNCIVIFDEAHHVVDALNDMYGAETN 346
Query: 260 SGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL- 318
+ + +C+ K ID TR L+ N +LR LE + ++ K
Sbjct: 347 TQQIQSCLFGLKRYIDCYETR--------LSSLNLFMLRQFHSFLESLVQFSSLHLKIPP 398
Query: 319 --GFTKPGPYIYELLADLNITQETAYKLIDIVEVAA------ELLQEDKLQNKKSTTACR 370
G T+ + + + L I +KL + +E LL+ L + T C
Sbjct: 399 IDGETQNVFTVEDFVTRLGIDNLNIFKLNEFLESKCLHLKLIGLLKSRILSDSNGTDPC- 457
Query: 371 IESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEF 430
+ I + + K + V R+ +L A+ L+ E
Sbjct: 458 -QGIHAVFHFVQTLKQPYSKSRIIVKFRKDIGCTFKMLVLHAANNLT-----------EI 505
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFP----LRVENPHVITSKQIWAGIVPVGPSGY 486
L V S++ GTL P+ L F + HVI I IV GP+
Sbjct: 506 ISL-VRSVVFVGGTLEPLRDIKLRLLGTFEDSHIVHCSFDHVIPDSHILPIIVSRGPTRV 564
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
L +Y R+S ELG ++NI R+VP G+++FF SY C ++
Sbjct: 565 PLEFTYATRESEILIHELGRMLLNICRVVPGGVVVFFSSYS------YCSYALNYLQQKD 618
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
IW+ + + K EP++S +++Y + + G + FAV GK+SEG++F D
Sbjct: 619 IWKLLLRQKAIFKEPQESLELNNVLDNYKKAVYEQQ--GGILFAVIGGKLSEGINFQDDL 676
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GR +++ GMPF +L ++ Q + Y +S ++ + VN
Sbjct: 677 GRCIIVVGMPFPN-----------HLSIELQ-ESINYITGMFPSVSSKEILEDMCMKLVN 724
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
Q +GR IRH DYGA++ D+RFA P+ +++ W++ + FG V+ +L FFR
Sbjct: 725 QTIGRTIRHISDYGAVLLVDQRFARPAISNKLPKWLRRRLAFPDDFGWVLSSLAEFFRNF 784
Query: 727 R 727
R
Sbjct: 785 R 785
>gi|302901601|ref|XP_003048472.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729405|gb|EEU42759.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 761
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 186/726 (25%), Positives = 323/726 (44%), Gaps = 102/726 (14%)
Query: 29 IQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQ 88
+Q+L + +LE P+GTGKT+ LL +A+++ + L
Sbjct: 1 MQTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYMPEKRKL------------------- 41
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP---------KMVILGSREQLCIHREV 138
+Y SRT S++ + + ELK+ YR + + L SR+ LC+H V
Sbjct: 42 ---------IYCSRTMSEIEKALVELKSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPSV 92
Query: 139 SLLR-GSAQNNACRFLC--------KKGTNRR-CNHHSRVADYMKNNPHLGDEPIDIEDL 188
+ GS + CR L +G N C +H + D ++ + + + +D+
Sbjct: 93 KREKSGSVVDARCRSLTAGFVKEKKDRGENVDVCVYHDNL-DLLEPHNLIPNGVWSFDDI 151
Query: 189 VNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLE 247
+ G CPYF R + + ++V Y+YL+DP + + ++ K+ I++FDEAHN++
Sbjct: 152 IRYGEEHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNID 211
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKR 307
+C ++ S D++ L A+N + + R + E L + +++ L E R
Sbjct: 212 NVCIESLSTDITEDSLRKATRGAQNLENRIAQMR-DTDQEQLQNEYQKLVQGLRDAEEAR 270
Query: 308 -----IAEVPINSKELGFTKPGPY--IYELLADLNITQETAYKLIDIVEVAAEL------ 354
+A + + L PG +A L E + + +V +E
Sbjct: 271 QEDAFMANPALPADLLQEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVRQVISETPPSFLA 330
Query: 355 -LQEDKLQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAADVLK 409
L+E KK C R+ S+ L++ I + A + V + +L+
Sbjct: 331 HLKEHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVSTYEKGFLLILE 390
Query: 410 GKASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
S T L + C + IA++ F R S+I+TSGT+SP++ + + L + +
Sbjct: 391 PYESDTAEVPNPILHFTCLDAAIAIRPVFERFY--SVIITSGTISPLEIYPKMLDFSTVI 448
Query: 462 RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
+ + + IV G +++S++ R+ + GN + A+I PDG+++
Sbjct: 449 QESYSMTLARRSFLPMIVTRGSDQASVSTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVV 508
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT 581
FFPSY M+ I+ W+ G L +W K+K +VE + LA+E Y +
Sbjct: 509 FFPSYLYMESIISMWQGM--GILDEVW----KYKLILVETPDAQETSLALETY--RTACC 560
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
+ GAV V RGKVSEG+DF GR V+ G+PF T+ ++ R LQ +
Sbjct: 561 NGRGAVLLCVARGKVSEGIDFDHQYGRTVLCIGVPF-QYTESRILKAR----LQFLRETY 615
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
KE D+ + A R Q +GRV+R + DYG ++ D RF +++Q+ W
Sbjct: 616 RIKEN--------DFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRTQLPKW 665
Query: 702 IQPHIQ 707
I +Q
Sbjct: 666 INQGLQ 671
>gi|195132879|ref|XP_002010867.1| GI21782 [Drosophila mojavensis]
gi|193907655|gb|EDW06522.1| GI21782 [Drosophila mojavensis]
Length = 852
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 186/690 (26%), Positives = 296/690 (42%), Gaps = 97/690 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ-NNACRFL 153
I + SRTHSQL Q++ EL+ + + + + LGSR+QLCI+ +V L N C +
Sbjct: 195 IFFCSRTHSQLSQIVAELRKTPHGQNVRCIALGSRQQLCINAQVRKLPNIGLINERCLDM 254
Query: 154 CK-----------KGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFM 202
+ + T RC + S +N L EP DIE+LV G G CPY+
Sbjct: 255 AQSKISANAISKSRQTLSRCVYKSSAQLQRLSNAALC-EPFDIEELVAEGSACGGCPYYA 313
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGL 262
TR Q ++ PY L+ R+ LG++ + +I+I DEAHNL A S +LS
Sbjct: 314 TRAAQSQAQLLLLPYPMLLQRSARQQLGLDLRGAIIIVDEAHNLLDTIAQLHSSELSLAQ 373
Query: 263 LTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK 322
L + + R ++ +N + + R L L E G
Sbjct: 374 LQLAKQQLAGYKQRYARRLSSANLLRINQLLYVVRRLLQL-------------LEAGGEP 420
Query: 323 PGPYIYELLADLNITQETAYKLIDIVEVA--AELLQE--DKLQNKKSTTACRIESISNIL 378
YEL A+ + ++L++ A+ +Q +LQ + + R +L
Sbjct: 421 RMLRTYELSAEGDFFNIDVHELLEFCARTRLAQKMQSFGRQLQREPHPSENRPPPTQQLL 480
Query: 379 KIIFRDKGTAHSAYYRVHVREADANAADVLK-----GKASRTLSWWC-FNPGIAMQE--F 430
+ + + + AD NA D K A++T + F P IA E
Sbjct: 481 QRLAAQHEQQCQTLSKCKRKAADENADDKAKQPPHPQPAAQTPAMSSPFRPLIAFLETLT 540
Query: 431 SRLEVGSIILTSGT-------LSPMDSFA-----------------------QELKLNFP 460
S G ++L T L+P + FA ++L + P
Sbjct: 541 SNAADGRVLLNPETATLKYLLLNPAEHFADIVKEARALIIAGGTMRPTQELTEQLFAHCP 600
Query: 461 LRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD 517
RV HV+ + + I+P GP+G L SY R S +EL + N+ ++P
Sbjct: 601 ERVVERFYDHVVPADAVLPFILPTGPTGARLCFSYAERTSPAMLKELSMVLQNLCGVLPA 660
Query: 518 GLLIFFPSYYLMDQCIACWKNTSHGNL--TTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
G++ F PSY +D T +G+L + +RI + K+ E + ++ Y
Sbjct: 661 GVVCFLPSYAYLD--------TVYGHLEQSGALQRIGQRKRIFRETAGGAGVEQLLQQY- 711
Query: 576 AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
A D + GA+ +V GK+SEGL+FAD GR V++ G+P+ T P+++ + +LD
Sbjct: 712 ANAIDQTAGGALLLSVVGGKLSEGLNFADQLGRGVIVVGLPYPNRTSPELKERMRHLD-- 769
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
L +G ++Y +AVNQ +GR +RH DY + DER+ +
Sbjct: 770 ----------ATLGNGAGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLLDERYGSERIQ 819
Query: 696 SQISLWIQPHIQCYSK-FGDVVYTLTRFFR 724
++ WI HI S+ FG V RFF+
Sbjct: 820 QKLPAWIARHIHVASEGFGAVQARTARFFK 849
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ Y+ Q M+++ Q L++K + ESPTGTGK+L L C L W
Sbjct: 18 FPYTPYEIQEQLMQQLFQVLEHKQIGIFESPTGTGKSLTLTCGALTW 64
>gi|46116906|ref|XP_384471.1| hypothetical protein FG04295.1 [Gibberella zeae PH-1]
Length = 761
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 186/732 (25%), Positives = 316/732 (43%), Gaps = 114/732 (15%)
Query: 29 IQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQ 88
+Q+L + +LE P+GTGKT+ LL +A+++ + L
Sbjct: 1 MQTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYMPEKRKL------------------- 41
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP---------KMVILGSREQLCIHREV 138
+Y SRT S++ + + ELK+ YR + + L SR+ LC+H V
Sbjct: 42 ---------IYCSRTMSEIEKALVELKSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPSV 92
Query: 139 SLLRGSAQNNA-CRFLC--------KKGTNRR-CNHHSRVADYMKNNPHLGDEPIDIEDL 188
+ A +A CR L ++G N C +H + D ++ + + + +D+
Sbjct: 93 KREKSGAIVDARCRSLTAGFVKEKKERGENVDVCVYHDNL-DLLEPHNLIPNGVWSFDDI 151
Query: 189 VNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLE 247
+ G CPYF R + + ++V Y+YL+DP + + ++ K+ I++FDEAHN++
Sbjct: 152 IRYGEEQKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNID 211
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRG-----------------QSSDETLN 290
+C ++ S D++ L A+N + S R + +DE
Sbjct: 212 NVCIESLSTDITEDSLRKATRGAQNLENKISQMRDTDQEQLQNEYQKLVQGLRDADEARQ 271
Query: 291 PDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQ---ETAYKLIDI 347
D F AL L K I E +I L + + Q ET +
Sbjct: 272 EDAFMANPALPEDLLKEAVPGNIRRAEHFIAFLKRFIEYLKTRMKVRQVISETPPSFL-- 329
Query: 348 VEVAAELLQEDKLQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADAN 403
L+E KK C R+ S+ L++ I + A + V +
Sbjct: 330 -----AHLREHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKG 384
Query: 404 AADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQEL 455
+L+ S T L + C + IA++ F R S+I+TSGT+SP++ + + L
Sbjct: 385 FLLILEPFESDTAEVPNPVLHFTCLDAAIAIKPVFDRFY--SVIITSGTISPLEIYPKML 442
Query: 456 KLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIV 515
++ + + IV G +++S++ R+ + GN + A+I
Sbjct: 443 DFQTVIQESYAMTLARRSFMPMIVTRGSDQASVSTSFQVRNEPSVVRNYGNLLTEFAKIT 502
Query: 516 PDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
PDG+++FFPSY M+ I+ W+ G L +W K+K +VE + LA+E Y
Sbjct: 503 PDGMVVFFPSYLYMESIISMWQGM--GVLDEVW----KYKLILVETPDAQETSLALETYR 556
Query: 576 AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
+ GAV V RGKVSEG+DF GR V+ G+PF ++ + ++L
Sbjct: 557 TAC--CNGRGAVLLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLQFL--- 611
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
Y+ + FLS + A R Q +GRV+R + DYG ++ D RF ++
Sbjct: 612 ----RETYRIKENDFLSFD------AMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKR 659
Query: 696 SQISLWIQPHIQ 707
+Q+ WI +Q
Sbjct: 660 TQLPKWINQGLQ 671
>gi|358380117|gb|EHK17796.1| hypothetical protein TRIVIDRAFT_214193 [Trichoderma virens Gv29-8]
Length = 763
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 181/726 (24%), Positives = 321/726 (44%), Gaps = 102/726 (14%)
Query: 29 IQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQ 88
+Q+L + +LE P+GTGKT+ LL +A+++ + L
Sbjct: 1 MQTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMPEKRKL------------------- 41
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREV 138
+Y SRT S++ + + EL++ YR + + L SR+ LC+H V
Sbjct: 42 ---------IYCSRTMSEIEKALVELQSLMKYRAEQLGYEEEFRGLGLTSRKNLCLHPSV 92
Query: 139 SLLR-GSAQNNACRFLC--------KKGTNRR-CNHHSRVADYMKNNPHLGDEPIDIEDL 188
+ GS + CR L +G N C +H + D ++ + + + + L
Sbjct: 93 KREKSGSIVDARCRSLTAGFVKEKKDRGENVDVCTYHDNL-DLLEPHNLIPNGVWSFDAL 151
Query: 189 VNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLE 247
+ G CPYF R + + ++V Y+YL+DP + + ++ K+ I++FDEAHN++
Sbjct: 152 LKYGEEHKQCPYFTARRMMEYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNID 211
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKR 307
+C ++ S D++ + A++ ++ ++ E L + +++ L E R
Sbjct: 212 NVCIESLSTDITEDSIRKATRSAQH-LERRIAEMRETDQEQLQNEYEKLVQGLREADESR 270
Query: 308 -----IAEVPINSKELGFTKPGPY--IYELLADLNITQETAYKLIDIVEVAAEL------ 354
+A + L PG +A L E + + +V +E
Sbjct: 271 QEDAFMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFLEYLKTRMKVRQVISETPPSFLA 330
Query: 355 -LQEDKLQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAADVLK 409
L+E KK C R+ S+ L++ I + A + V + +L+
Sbjct: 331 HLKEHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQALQEVATFATLVATYEKGFLLILE 390
Query: 410 GKASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
S T L + C + IA++ F R S+I+TSGT+SP++ + + L + +
Sbjct: 391 PYESDTAEVPNPTLHFTCLDAAIAIRPVFERFY--SVIITSGTISPLEMYPKMLDFSTVI 448
Query: 462 RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
+ + + IV G ++SS++ R+ + GN + ARI PDG+++
Sbjct: 449 QESYSMTLARRSFLPMIVTRGSDQASVSSSFQVRNEPSVVRNYGNLLTEFARITPDGMVV 508
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT 581
FFPSY M+ I+ W+ G L +W K+K +VE + LA+E Y +
Sbjct: 509 FFPSYLYMESIISMWQGM--GILDEVW----KYKLILVETPDAQETSLALETY--RTACC 560
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
+ GA+ V RGKVSEG+DF GR V+ G+PF ++ + E+L
Sbjct: 561 NGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFL--------- 611
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
+ET + D+ + A R Q +GRV+R + DYG ++ D RF +++Q+ W
Sbjct: 612 --RETYR--IKENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRTQLPKW 665
Query: 702 IQPHIQ 707
I +Q
Sbjct: 666 INQGLQ 671
>gi|294654380|ref|XP_456430.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
gi|218511979|sp|Q6BZD9.2|CHL1_DEBHA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|199428836|emb|CAG84382.2| DEHA2A02112p [Debaryomyces hansenii CBS767]
Length = 820
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 179/664 (26%), Positives = 304/664 (45%), Gaps = 73/664 (10%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRG-SAQ 146
I ++SRTHSQL Q +L + + R K L SR+QLCIH ++S L S+
Sbjct: 193 IFFSSRTHSQLSQFSHQLNMTEFESSLDNIPERIKFSPLASRKQLCIHPKISKLSNVSSI 252
Query: 147 NNACRFLCKKGTNRRCN-----HHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPY 200
N+AC L + N C H+++ + +K L I DIEDL +G CPY
Sbjct: 253 NDACIDLQQSSKNS-CEYIPKLHNTQSEEIVKKFSDLSFTKIHDIEDLGKLGNKLKICPY 311
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSS 260
+ R+ +I+ PY L+ R L + +SI+I DEAHNL + + S ++S
Sbjct: 312 YSVRKGIDVTEIIALPYQMLLQDSTRSALNLNIDDSIIIIDEAHNLLDVISSIYSVSITS 371
Query: 261 GLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGF 320
L+ K ++ R N N L L LEK I+ NSK+ G
Sbjct: 372 NELSDITKSLKFYLNKFIKRLNSG-----NRINIMKLIKLCQVLEKFISS---NSKD-GK 422
Query: 321 TKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKI 380
K G I + +D I + T L++I ++ L KS A +IES L
Sbjct: 423 IKHGDEI--ITSD--IFEGTTGDLVNIHKIEQFL--------NKSKIAYKIESYMQKLND 470
Query: 381 IFRDKGTAHSAYYRVH------VREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE 434
K ++ +++ + K S ++++ +P ++ +
Sbjct: 471 SESIKNRSNPLLFKITKFLKCLTNPSKEGKFFWDKTNDSVSINYMLLDPSEIFRDIVK-R 529
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPL-------RVENPHVITSKQIWAGIVPVGPSGYL 487
++L GT+ PM+ + L FP + H+I + + + P+G +
Sbjct: 530 ARCVLLCGGTMEPMNDYTNYL---FPYIPPEQIKKFSCGHIIPQENL--EVFPIGNYNDI 584
Query: 488 -LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
S+ R++ + ELG+ I+NI PDG++IFFPSY ++ + W+
Sbjct: 585 SFEFSFDKRNNSKMIIELGHAILNIIESTPDGIVIFFPSYKYLNVVMNVWRQNK------ 638
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
I E + K K EP SS + DY + K S A+ +V GK+SEG++F+D
Sbjct: 639 IIESLTKVKAIFQEPEDSSKVEKVLNDYSSTNKSEKHS-ALLLSVVGGKMSEGINFSDEL 697
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
R V++ G+PF + ++ KR++++ ++GG + + ++ +++Y RAVN
Sbjct: 698 ARGVIMIGLPFPNIFSAELIAKRKFIEESTIAKGGTKSQ---AMVNAKNFYENICMRAVN 754
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI----QCYSKFGDVVYTLTRF 722
Q++GR IRH++DY I D+R+ + ++S W++ + +C + F V+ F
Sbjct: 755 QSIGRSIRHKNDYSIIYLFDQRYGSDKIQDKLSGWVKQKLFTRGRC-TDFNQVIKETQDF 813
Query: 723 FREE 726
FR++
Sbjct: 814 FRQK 817
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTL 69
PFE YD Q+ M+ + ++ N L ESPTGTGKTL L+C+++ W + ST
Sbjct: 19 PFEPYDIQIQLMDAIYDAIDNYKIGLFESPTGTGKTLSLICSSMTWLREYKKNSTF 74
>gi|47204868|emb|CAF94395.1| unnamed protein product [Tetraodon nigroviridis]
Length = 529
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 149/523 (28%), Positives = 236/523 (45%), Gaps = 94/523 (17%)
Query: 88 QSGDSKLPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRGSAQ 146
Q+ + ++P I + +RTH Q+ QV EL+ + Y R M IL SR+ C++ EV+ S +
Sbjct: 20 QNSNQRVPKIFFGTRTHKQITQVAHELRRTVYSRVPMTILSSRDHTCVNPEVA--PHSKR 77
Query: 147 NNACRFLCKKGTNRRCNHHSRVA----DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFM 202
N C+ + R C+++ V Y H E DIEDLV++G+ C YF
Sbjct: 78 NELCKERLEAKDGRSCHYYHGVQKMGEQYQLQRVHGLCEAWDIEDLVSLGKRLRSCSYFA 137
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK----------NSILIFDEAHNLEGICAD 252
REL DIV PYNYL+DP R+ + +E + IL+ DEAHN+E +
Sbjct: 138 ARELMMDADIVLCPYNYLLDPLIRESVSLEEQLEEMMDINLSGQILVLDEAHNIEDCARE 197
Query: 253 AASFDLSSGLLTACISEAKNCI---------------------------DISSTRRGQSS 285
+ASF L+ L + E ++ I + S R +S+
Sbjct: 198 SASFTLNYDSLLSSRDELESMIRNNIRPDKHEPLRAFCYSLINWIQESQSLLSERGYESA 257
Query: 286 DET--------------LNPDNFAILRALLLKL---EKRIA---------EVPINSKELG 319
+ + F IL+ L+ + E+RI +VP S L
Sbjct: 258 SKVWSGRDMVDIFHNLGITSATFNILKQKLMAVLEKEERIGVVNGREDLVQVPTQSAPLP 317
Query: 320 FTKPGPYIYELLADLNITQETA--YKLIDIVEVAAELLQEDKLQNKKSTTACR--IESIS 375
+++ + + ETA DI Q L N ST + R E
Sbjct: 318 PLSSKAFLWSWIT----SSETAAGQTETDIASRLCRFCQRVTLANNASTVSVRRFAEDYR 373
Query: 376 NILKIIFR-------DKGTAHSAYYRVHVREADA--NAADVLKGKASRTLSWWCFNPGIA 426
L+ F D A + R H R+ + ++VL T+S+WC NP +A
Sbjct: 374 VALQRSFAWTNQVPPDAPDAQGFFGRPHQRQRRSIRVKSEVL------TVSFWCLNPAVA 427
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
+ V SI+LTSGTLSPM SF+ EL + F +++E HVI Q+W G V GP G
Sbjct: 428 FSDLGD-AVRSIVLTSGTLSPMASFSSELGVKFSIQLEANHVINKSQVWVGTVGAGPHGK 486
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
L ++++ ++ ++ E+G ++++ +++ G+L F PSY ++
Sbjct: 487 KLCATFQQAETYTFQDEVGALLLHVCQVMTKGVLCFLPSYKVI 529
>gi|449019202|dbj|BAM82604.1| probable DNA helicase required for mitotic chromosome segregation
CHL1 [Cyanidioschyzon merolae strain 10D]
Length = 1020
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 181/705 (25%), Positives = 302/705 (42%), Gaps = 103/705 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPK-----MVILGSREQLCIHREVSLLRGSAQNNACR 151
ILY SRTHSQL Q I E++ + Y + +L SR+ +CIH +V +LR +A N
Sbjct: 339 ILYASRTHSQLSQFISEVRRTEYAKQDPTLTTTVLASRKMMCIHPKVRMLRSAAAVNE-- 396
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI------------DIEDLVNIGRTFGPCP 199
C + N + + A+ P E I D+EDL+ +G+ CP
Sbjct: 397 -RCHELRNNQVK--TAAAEQQSQCPFYQKERIRNLANVMHQQVCDLEDLLALGQQHQACP 453
Query: 200 YFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDL 258
Y+ R +++ PY L+ R+ V + +I+I DEAHNL + + L
Sbjct: 454 YYAARASLACAELIVMPYQTLLHETTRQSANVPVDQRTIVILDEAHNLVDALNEMHTTKL 513
Query: 259 SSGLLTACISEAKNCID---------------------ISSTRRG-QSSDETLNPDNFAI 296
S +TA + I+ +++ R+G Q D + P +
Sbjct: 514 SIAEVTAMEATVSEFIEKQKTWKPDPDRSFHLEQLRRLLAALRQGMQPEDLSRRPSDPTR 573
Query: 297 LRALLLKLEKRI----AEVPINSKELG-------FTK-PGPYIYEL-LADLNITQETAYK 343
R L ++ +E+P ++L F + P + +++ + +N +Q Y
Sbjct: 574 TRPLDKASDEHSPVVRSEIPEPGRDLQDDVILSEFCQTPSDFCFQMKIEQMNFSQLIRYL 633
Query: 344 LIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAH-SAYYRVHVREA-- 400
+ L E + + ++S + +S + + + T + + +Y + A
Sbjct: 634 FSTKCMHMLQSLHESRRRTERSIESSAHSVLSEVASVHSNESPTLYGTGFYELASFLAAL 693
Query: 401 -DANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL---- 455
+ A + +R + + +P R + IL GTL P ++ L
Sbjct: 694 CEPRACGKVLTAPNRHIRYVLLDPIPYFSPIYR-TARATILAGGTLEPREALLPRLFDEE 752
Query: 456 ---KLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
++ F HV+ + + A I+ GP+G L S+ R + ELG+ IVN+
Sbjct: 753 TCKQVYF---SAFQHVVPQENVLALILGKGPTGLPLEFSFSQRQCMAQIDELGHCIVNLC 809
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR---------- 562
+VP GL++FFPSY L W + N++ ERI + K+ E R
Sbjct: 810 ALVPKGLVVFFPSYALER---LVWTRFAETNIS---ERIARRKEVFREQRGCDVDKLFND 863
Query: 563 -QSSLFPLAIEDYMAKLKDTST-SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
+S++ L A+L GA+ AV GK+SEG++FAD GR VV+ G+PF
Sbjct: 864 YRSAVTALPAATERAELASPQERDGALLSAVIGGKLSEGINFADDLGRCVVVVGLPFPNA 923
Query: 621 TDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
+ RL +L Y + LS ++ AVNQ+VGR IRH DY
Sbjct: 924 RQTETRLVLHFLQ-------ERYPSSDLS----REYLENACMIAVNQSVGRAIRHARDYA 972
Query: 681 AIIFCDERFAHPSR-KSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
A++F D+R+A R + ++ W++ + FGD + L FFR
Sbjct: 973 AVVFVDQRYAAQERLRFKLPRWLRGRVLEPRTFGDAIQQLASFFR 1017
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 6 IRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
+ G D FP+ + Y QL M V +++ + ESPTGTGKTL LLCA L W
Sbjct: 152 LSGADFGFPYPQPYGTQLELMRAVYETIDRGGIGVFESPTGTGKTLSLLCAALTW 206
>gi|297743288|emb|CBI36155.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/243 (46%), Positives = 154/243 (63%), Gaps = 2/243 (0%)
Query: 775 SLHEVKNRNTSSHSGEIVPANRSSLSPYKGIWASELKNSSDLIQFEKKLLLSGRKSIQYR 834
S+ E K N SS G ++PANRSSL+PY+ + L + SDL +K LL+ GRK +Q
Sbjct: 89 SVLEAKRGNFSSQLGGVLPANRSSLTPYEQNQSLTLSSPSDLFSKKKSLLIPGRKIMQCS 148
Query: 835 DHEFIDLTSNSSLHAKPRKEELIAPCSTKKRKVLISESDQMQCVKKISEIASDAESSQPS 894
+ E ++S L KP KEE++ C+ KKR++ + D MQ + +++Q +
Sbjct: 149 NSEMPYSFNSSLLGEKPSKEEVLVTCTAKKRRIAKLDPDAMQNFEMSHHHPFMVKNAQSN 208
Query: 895 SFIPITNKVKHEKPQISDSGSRIIAQGSAPSKVDGTTYRIEAEIQSEKSKGSHSSAPPCG 954
+ + VKH+ Q+ D +R GSA D + + +AE S+K KG SS PC
Sbjct: 209 DHL-ANHSVKHDNSQLPDGTNRETQVGSAMLLEDDSPKK-DAEFLSQKGKGVQSSPLPCS 266
Query: 955 GEETKGSAFLIQVQEKLSATEYKEFVGFMKAMKSKAMKISHVLQSIAKLFAGPERLPLLR 1014
+ET+GSAFLIQVQEKLS EYKEFVGFMKA+KSKAMKI VL+SIA+LF+GPERLPLL+
Sbjct: 267 VKETRGSAFLIQVQEKLSTAEYKEFVGFMKALKSKAMKIGQVLESIARLFSGPERLPLLK 326
Query: 1015 RFK 1017
R++
Sbjct: 327 RYE 329
>gi|432863481|ref|XP_004070088.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oryzias latipes]
Length = 859
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 178/703 (25%), Positives = 296/703 (42%), Gaps = 134/703 (19%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + +V LGSR+ LCI+ EV L GS Q N+ C
Sbjct: 210 IYYCSRTHSQLAQFVHEVQKSPFSKDISLVTLGSRQNLCINEEVRRL-GSIQRINDRCME 268
Query: 153 LCKK---------GTNRRCNHHSRVADYMKNNP--HLGDEPI----DIEDLVNIGRTFGP 197
+ K G R+ V + K + + DE + DIE L+ +G+
Sbjct: 269 MQKNKHEKQRPEDGAKRKRGPAKSVCPFNKASALQQMRDEVLGTVYDIEQLIKVGKDIHS 328
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
CPY+ TR +V PY ++ R+ GV+ K ++I DEAHNL + S +
Sbjct: 329 CPYYATRLAIPPAKLVVLPYQMVLHEATRRAAGVQLKGQVVIIDEAHNLSDTLSCIHSSE 388
Query: 258 LSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE 317
L+ L S+ D +R + + FAI R L+ L ++ + P +
Sbjct: 389 LNGSQLCRAYSQLTQYADRYKSRLKAKNLMYIKQILFAIER-LVRVLGGKVGQNPQSQN- 446
Query: 318 LGFTKPGPYIYEL--------LADLNITQETAY--------KLIDIVEVAAELLQEDKLQ 361
T+ G ++ + + ++N + Y KL VE A Q
Sbjct: 447 ---TQAGTEMHTINNFLFKAEIDNINWFKLQRYFEKSMISRKLSGFVEKYAGSGVTLHTQ 503
Query: 362 NKKSTTACRIESISNILKIIFRDKGTA---------------------HSAYYRVHVREA 400
N + R E + N LK + ++ +A + +
Sbjct: 504 NTLNKENRRTEGLLNYLKTLKSNQNSASDLQESAEAEKVLSASPMMQIEGFFMALTNSNT 563
Query: 401 DANAADVLKGKASRT-LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF 459
D +G S + + + NP + E + E S+I+ GT+ P+ F +EL L+
Sbjct: 564 DGRVLVHRQGTLSESSIKFLLLNPAVHFAEVLK-ECRSVIIAGGTMQPVSDFKEELLLSA 622
Query: 460 PLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
+ E HVI + I ++ GPSG L+ ++++RD E G + NI
Sbjct: 623 GVGQERIVEFACGHVIPPENILPIVMCSGPSGQELDFTFQSRDLPCMMDETGRILSNICN 682
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
+VP G++ FFPSY + + + W+ + G LT R+ KK EP++ P +E
Sbjct: 683 VVPGGVVCFFPSYEYLRRIMCHWE--ASGALT----RLSNKKKIFQEPKK----PNQVEH 732
Query: 574 YMAKL---------KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+++ + + +GA+ F+V GK+SEG++F+D GR VV+ GMP+ + P+
Sbjct: 733 VLSEFSRCIQRCAQESSGLTGALLFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPE 792
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
++ K YLD +H ++
Sbjct: 793 LQEKMSYLD----------------------------------------KH-----LVVL 807
Query: 685 CDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
CD R++ P+ S++ WI+ Y+ FG L +FF E++
Sbjct: 808 CDRRYSRPATLSKLPAWIRSRTSTYATFGPAFAALRKFFMEKK 850
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ YD Q +M+ + ++L + ESPTGTGK+L L+C L+W
Sbjct: 10 FPYQPYDIQEQFMQALYRALDQSKVGIFESPTGTGKSLSLICGALSW 56
>gi|350590580|ref|XP_003483097.1| PREDICTED: Fanconi anemia group J protein-like [Sus scrofa]
Length = 801
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 240/486 (49%), Gaps = 55/486 (11%)
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREV 138
S + G SK+P I + +RTH Q+ Q+ +EL+ + Y M IL SR+ C+H EV
Sbjct: 229 SSDTTKKDHGGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEV 288
Query: 139 SLLRGSAQNNACRFLCKKGTNRRCN-HHS--RVADYMK-NNPHLGDEPIDIEDLVNIGRT 194
+N C L + C +H +++D H + DIE+LV +G+
Sbjct: 289 VGNFNRKEN--CMELLDGRNGKSCYLYHGIHKISDQRTLQTLHGMCKAWDIEELVTLGKK 346
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ REL + DI+F PYNYL+D R+ + + K ++I DEAHN+E ++A
Sbjct: 347 IKACPYYTARELMQDADIIFCPYNYLLDVQIRESMEINLKEQVVILDEAHNIEDCARESA 406
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI------ 308
S+ ++ L E + + I++ R+ E + ++++ L + E +
Sbjct: 407 SYSVTEVQLRFARDELDSMV-INNIRK--KDHEPIRAVCYSLINWLEVNSEHLMERDYES 463
Query: 309 -------AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQED--- 358
+E+ N ++G T A I Q + ++ E + + ++
Sbjct: 464 SCKIWSGSEMLSNLHKMGITT---------ATFPILQGHLFAILQKEEKVSSIHGKEEAV 514
Query: 359 KLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVRE----------ADANAADVL 408
++ ++T ++ + +L +FR + + + Y+V +++ +D N VL
Sbjct: 515 EIPIISASTRVMLKGLFMVLDYLFR-QNSRFADDYKVAIQQTYSWINQPDSSDKNVFFVL 573
Query: 409 --------KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
+ A R L++WC NP +A + + +V +I+LTSGTLSPM SF+ EL + F
Sbjct: 574 PKNKKRLPQKTAVRVLNFWCLNPAVAFSDING-KVWNIVLTSGTLSPMKSFSSELGVTFT 632
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
+++E HVI + Q+W G + GP G L +++++ ++ ++ E+G ++++ + V G+L
Sbjct: 633 IQLEANHVINNSQVWVGTIGSGPQGRNLCATFQHTETFAFQDEVGALLLSVCQTVSQGIL 692
Query: 521 IFFPSY 526
F PSY
Sbjct: 693 CFLPSY 698
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 45/60 (75%)
Query: 4 YKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
Y I G+ ++FP++AY QL M +++ L +K + LLESPTG+GK+L LLC+ LAW++SL
Sbjct: 8 YTIGGVKIDFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSL 67
>gi|238883179|gb|EEQ46817.1| DNA repair helicase RAD3 [Candida albicans WO-1]
Length = 701
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 178/689 (25%), Positives = 305/689 (44%), Gaps = 88/689 (12%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K +R
Sbjct: 60 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEFRA 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLC--------KKGT---NR 160
+ + L SR+ LC+H +S R G + CR + +KG +
Sbjct: 95 NELGEVEDFRGLGLTSRKNLCLHPTISKERKGVVVDEKCRRITNGQLKEKIEKGVPTEDS 154
Query: 161 RCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C+ H ++ D +N + + L+ + G CPYF R + +I+ Y+YL
Sbjct: 155 LCSFHEKLYDLEPHN-LVPSGVYSFDALIKYCKEEGTCPYFTVRRMIPFCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + + E K+SI+IFDEAHN++ +C ++ S DL+ L A +
Sbjct: 214 LDPKIAERVSRELSKDSIVIFDEAHNIDNVCIESLSLDLTDETLKKASRGANKLGEAIED 273
Query: 280 RRGQSSDETLNPDNFAI--LR-ALLLKLEKRIAEVPINSKEL------GFTKPGPYIYEL 330
+ Q S++ N + LR A + + ++ P+ ++L G + G +
Sbjct: 274 MKAQDSEKLQNEYEQLVEGLRQAEIARDQELFMANPVLPQDLLDEAIPGNIRKGEHFIAF 333
Query: 331 LADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKIIFRD 384
L +T K++ ++ E LQ K +K C R+ + L++ D
Sbjct: 334 LKRFIEYLKTRMKVLHVISETPTSFLQHLKELTYIERKPLRFCSERLSLLVRTLEVTEID 393
Query: 385 KGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIAMQE-FSRLE 434
A A + V D+ +L+ + L + C + IA++ F R
Sbjct: 394 DFNALKDIATFATLVSTYDSGFQLILEPYETEGSTVPNPILHFTCLDASIAIKPVFDRF- 452
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
S+I+TSGT+SP+D + + LK ++ + + IV G ++S +
Sbjct: 453 -SSVIITSGTISPLDMYPKMLKFETVIQESYAMTLARRSFLPMIVTKGSDQVSISSRFEI 511
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+ + G+ ++ A+I PDG+++FFPSY M+ I+ W+ S G L +W KH
Sbjct: 512 RNDPSVVRNYGSLLIEFAKITPDGMVVFFPSYLYMESIISMWQ--SMGVLDEVW----KH 565
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K +VE + LA+E Y ++ GAV +V RGKVSEG+DF H GR V++ G
Sbjct: 566 KLILVETPDAQETSLALETYRKAC--SNGRGAVLLSVARGKVSEGIDFDHHYGRTVLMIG 623
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+PF ++ + E++ Q + ++
Sbjct: 624 IPFQYTESRILKARLEFMRDHFQIKENDF 652
>gi|401827400|ref|XP_003887792.1| Rad3-like DNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998799|gb|AFM98811.1| Rad3-like DNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 618
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 177/715 (24%), Positives = 308/715 (43%), Gaps = 105/715 (14%)
Query: 16 EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNN 75
E Y+ Q ++ + +++ + SPTGTGKT+ LL A + + G++ +
Sbjct: 4 ELYEGQKQFIRDARRVVEDGGVGIFSSPTGTGKTMSLLNAVMDY------IGGDGAEPGS 57
Query: 76 QISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIH 135
+ + ++ +G T+ Y +RTH+QL Q + ELK R VILGSR C++
Sbjct: 58 RSKALEQTLFQGSAG-----TVFYCTRTHTQLSQAVNELKRLGVRCNAVILGSRRVYCLN 112
Query: 136 REVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRT 194
+V + S A N CR + ++G A Y ++ G +D+ED IGR
Sbjct: 113 EKVLQHKNSDAMNEGCRQIVREGL---------CAFYDGSDLFDGHGILDVEDFGLIGRE 163
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ ++ DIVF PY L RK ++ + SI+I DEAHN IC
Sbjct: 164 QKLCPYYASKRYSHRCDIVFLPYQLLFTREGRKSADIDVRGSIVIVDEAHN---ICDSVI 220
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
+ SS +L IS +++ R + S + +L ++E A ++
Sbjct: 221 QMNTSS-VLFVTISRYVKAMELY---RERYSKRAKGDGKLERVMEVLRRIEGFGA---LH 273
Query: 315 SKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESI 374
+ +G + + E L I + +++I + A KL+ ++ I
Sbjct: 274 CRSVGEEERVVGVSEFLLKTGIED---FNMLEIEDYIASSGISRKLEGLGRDLNLQLPEI 330
Query: 375 SNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE 434
S L ++ + Y SR + + + + ++ LE
Sbjct: 331 SKFLSLLTMSDRSGRIFY-------------------TSRRIKFTPLDASMYFEDV--LE 369
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
S++L GT+ P+D A L P+ V +VP GPSG + +Y
Sbjct: 370 CRSLLLAGGTMEPVDQLASVLARRNPMYFSYKSV--CNDFLPIVVPSGPSGREVVVNYET 427
Query: 495 RDSIEYKQELGNTIVNIARIVPD-GLLIFFPS-YYLMDQCIACWKNTSHGNLTTIWERIC 552
R+S+E +++ ++I+N + V D G++ F PS YL AC +RI
Sbjct: 428 RESLESVKDVASSILNFSNAVRDGGMVCFLPSKAYLKILREAC------------GDRIG 475
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
+ K+ + E + D+ + + FAV GK+SEG++F+D+ R +++
Sbjct: 476 R-KRVLYED---------LTDFQEYASEVKKGACILFAVMGGKLSEGINFSDNLCRLLMV 525
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRV 672
G+P+ DL+ + + G +G + A R VNQ +GR
Sbjct: 526 VGVPYPNQ------------DLELKERIG---------FNGNGYTTMLAMRVVNQTLGRA 564
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+RH++DY ++ D+R+ S+ IS W++ C FGD + +RF ++R
Sbjct: 565 LRHKNDYAVLVLLDKRYIQLSK--LISSWVREKAIC-CGFGDGLLRASRFLNKDR 616
>gi|118383994|ref|XP_001025150.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89306917|gb|EAS04905.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1032
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 185/341 (54%), Gaps = 26/341 (7%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK-QI 474
L+ C NP + ++ + + ++ TSGTL P + + EL++ F + +EN HVI SK Q+
Sbjct: 536 LNLTCLNPSLNFKKILQQDPHCLLFTSGTLKPFNFWKTELQIPFNVILENKHVIDSKKQL 595
Query: 475 WAGIVPVGPSG--------YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
++ ++ PS N SY R + +LGN + + I+P+G+LI FPS
Sbjct: 596 FSAVIKGRPSKSSVITTYKQTFNFSYEKRKDQDMILDLGNALAELFEIIPNGVLIVFPSN 655
Query: 527 YLMDQCIACWKNTSHGNLTT-----IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT 581
LM+QC + W N + I+ R+ K E + ++ A++D+ K K
Sbjct: 656 QLMNQCRSQWSNFFSNQNSNNQQQKIYNRLLSKKFIYWEGKTNTETMSAMQDFRQKSK-- 713
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
+ G+ FF V RGK++EG+DFAD + RAV++ G+P+ + + +++K++YL+ Q++
Sbjct: 714 TQKGSAFFCVARGKITEGIDFADESARAVILIGLPYPPLKNINIQVKKDYLNQQSKLNSQ 773
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
++G +WY Q+A RA+NQ++GRVIRH +D+G++IF DERF + W
Sbjct: 774 R--------INGNEWYVQEAIRAMNQSIGRVIRHINDWGSVIFLDERFGQQDIIKHMPSW 825
Query: 702 IQPHIQCYSKFGDVVYTLTRFFREERICGSTNLKLIKTEVS 742
Q F + L++FF E+++ + ++ +++
Sbjct: 826 C--LTQQIDSFDQALIQLSQFFSEKKMASKQKQEELRKQIN 864
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 145/267 (54%), Gaps = 26/267 (9%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I I+V FP + YD Q+VYME VI+ LQ + + LLESPTGTGKTL +LCA L W
Sbjct: 68 INNIEVYFPHKPYDVQVVYMESVIKCLQERTHGLLESPTGTGKTLSMLCACLGWL----- 122
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLPT-ILYTSRTHSQLRQVIQELKTSNYRPKMV 124
Q Q +P I+Y SRTHSQ++QV++E+KT+ Y+PK++
Sbjct: 123 ---------------QQRREQQQGIKDIIPNRIIYCSRTHSQIQQVVKEIKTTAYQPKII 167
Query: 125 ILGSREQLCIHREVSLLRGSAQNNAC-RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI 183
+ GSREQ CI +E L+G N +C + + + C + D ++ L
Sbjct: 168 VQGSREQYCIKKEFQQLKGGLLNTSCQKAISQLNPQTYCRYFKGTMDESRDFFKL--RMP 225
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIEDL + G CP++ T+++ VD++F PYNYL+D + KN+++IFDEA
Sbjct: 226 DIEDLRSDGYNNNYCPFYHTQKVNNAVDVLFLPYNYLLDRNVMNQANINIKNAVIIFDEA 285
Query: 244 HNLEGICADAASFDLSSGLLTACISEA 270
HN+ + S L+ L C +EA
Sbjct: 286 HNIHKSAEEGYSLFLNYSSL--CAAEA 310
>gi|396081915|gb|AFN83529.1| Rad3-like ATP dependent DNA binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 617
Score = 189 bits (480), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 180/722 (24%), Positives = 312/722 (43%), Gaps = 119/722 (16%)
Query: 16 EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNN 75
E Y+ Q +++ + + + + SPTGTGKT+ LL A + + G ++N+
Sbjct: 5 ELYEGQKQFIKDAKKIVDGEAVGIFSSPTGTGKTMSLLSAVVDY------IDVDGVELNH 58
Query: 76 QISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIH 135
+ + ++ G T+ Y +RTH+QL Q I ELK + R V+LGSR+ C++
Sbjct: 59 RNRVLEQALFQRNGG-----TVFYCTRTHTQLAQAINELKRLDVRCNAVVLGSRKIYCLN 113
Query: 136 REVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRT 194
++ + S A N C+ + K+G A Y G +D+EDL IG+
Sbjct: 114 EKILQYKNSDAMNEGCKQIVKEGL---------CAFYDGGELFDGCGVLDVEDLTLIGKE 164
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ ++ DIVF PY L R+ + ++ + SI+I DEAHN IC
Sbjct: 165 QRLCPYYASKIYSHQCDIVFLPYQLLFTREGRRSVDIDVRGSIVIVDEAHN---ICDSVI 221
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
+ S+ +L IS+ +++ R E + D +L +L L + A ++
Sbjct: 222 QMNTST-ILFMTISKYIKAMEMYKER----YSERVRRD--GVLERILEVLRRIEAFGLMH 274
Query: 315 SKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESI 374
+ + + + E L +I + +++I + A KL+ + ++ I
Sbjct: 275 CRNMNEEEGVMGVSEFLLKTSIED---FNMLEIEDYIASSGISRKLEGFEKDLNLQLSEI 331
Query: 375 SNILKII-FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSR- 432
S L ++ DKG G+ T F P A F
Sbjct: 332 SKFLSLLTMSDKG-----------------------GRIFYTSKRIKFTPLDATMYFEDV 368
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPV----GPSGYLL 488
LE S++ GT+ P+D A L +P + + + +P+ GPSG +
Sbjct: 369 LECKSLLFAGGTMEPIDQLAS------VLGKRSPQYFSYRSVCRDFLPIVVGSGPSGREV 422
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPD-GLLIFFPS-YYLMDQCIACWKNTSHGNLTT 546
+Y R+S E +++ ++I+N + V D G++ F PS YL C G
Sbjct: 423 VVNYETRESTESVKDVASSILNFSNAVRDGGMVCFLPSKAYLKILREVCGDMI--GRKKA 480
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
++E + ++ V+E ++ + + FAV G++SEG++F D
Sbjct: 481 LYEDLTNFQEYVLEVKKEA--------------------CILFAVMGGRLSEGMNFNDKL 520
Query: 607 GRAVVITGMPFATM-TDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
R +++ G+P+ + + K R+K +G + A R V
Sbjct: 521 CRLLMVVGVPYPSQDLELKERIKH----------------------NGRGYTTSIAMRIV 558
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFRE 725
NQ +GR +RH+ DY ++ D R+A S+ IS WI+ I C S FGD + +RF +
Sbjct: 559 NQTLGRALRHKDDYAVLVLLDRRYAQLSK--LISSWIRERIACCS-FGDGLLKASRFLNK 615
Query: 726 ER 727
+R
Sbjct: 616 DR 617
>gi|47221017|emb|CAG12711.1| unnamed protein product [Tetraodon nigroviridis]
Length = 759
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 196/802 (24%), Positives = 324/802 (40%), Gaps = 206/802 (25%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++K+
Sbjct: 4 IDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKAF- 62
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +V++EL K Y K
Sbjct: 63 --------------------------PLEVTKLIYCSRTVPEIEKVVEELRKLLEYYTKQ 96
Query: 124 ---------VILGSREQLCIHREVSLLRGSAQNN----------------------ACRF 152
+ L SR+ LCIH EVS LR + + ACRF
Sbjct: 97 TGENNNFLALALSSRKNLCIHPEVSALRFGKEVDGKCHSLTASYIRAQRHSDSNVPACRF 156
Query: 153 -------LCKKGTNRRCNHHSRVADYM-KNNPHLGDEP---------------------- 182
+ K T +C+ + + K P+ + P
Sbjct: 157 FEVRPFLVSKTLTLEKCSQTVQTEILLEKKGPNCSNLPPRGALCLQDFDAVGRQVPLPAG 216
Query: 183 -IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIF 240
+++DL + GR G CPY++ R +IV Y+YL+DP + E K S+++F
Sbjct: 217 IYNLDDLKDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVF 276
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHN++ +C D+ S +++ L C Q + +TL I
Sbjct: 277 DEAHNIDNVCIDSMSVNITRRTLDRC----------------QGNVDTLQRTIHKIKETD 320
Query: 301 LLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKL 360
KL++ + E L + NI +ET L + V + E+LQ
Sbjct: 321 AAKLKEEYRR----------------LVEGLKEANIARETDVYLSNPV-LPDEILQGSA- 362
Query: 361 QNKKSTTACRIESISNILKII-------FRDKGTAHSAYYRVHVREADANAADVLKGKAS 413
+++T A + +++ FR G + + H R +D
Sbjct: 363 --RRATVAAQDAGDRRHRRLLRCYSHRQFRHPGQHVQSRFYHHHRAFRGQNSD------- 413
Query: 414 RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
C PG A+Q TLSP+D + + L +
Sbjct: 414 -----HC-QPGAALQ---------------TLSPLDIYPKILDFRPVTMASFTMTLARTC 452
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+ I+ G L+S + R+ + GN ++ ++ IVPDG++ FF SY M+ +
Sbjct: 453 LCPLIIGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSSIVPDGIVAFFTSYVYMENIV 512
Query: 534 ACW--KNTSHGNLTT-----------------IWERICKHKKPVVEPRQSSLFPLAIEDY 574
A W + + H ++ I E I K+K +E ++ +A+E Y
Sbjct: 513 ASWYEQVSVHRRISVCNTACTQIKAYFVFFKGILENIQKNKLIFIETPDAAETSMALEKY 572
Query: 575 MAKLKD----------TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
+++D + GA+ +V RGKVSEG+DF H GRAV++ G+P+
Sbjct: 573 Q-EVRDRCHDGHLRACENGRGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRI 631
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
++ + EYL Q + D+ A R Q VGR IR + DYG +IF
Sbjct: 632 LKARLEYLRDHFQ-------------IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIF 678
Query: 685 CDERFAHPSRKSQISLWIQPHI 706
D+R+A ++ ++ WIQ HI
Sbjct: 679 ADKRYARMDKRGKLPRWIQEHI 700
>gi|400593003|gb|EJP61017.1| DNA repair helicase RAD3 [Beauveria bassiana ARSEF 2860]
Length = 749
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 180/710 (25%), Positives = 308/710 (43%), Gaps = 111/710 (15%)
Query: 43 PTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
P+GTGKT+ LL +A+++S+ L +Y SR
Sbjct: 2 PSGTGKTVSLLSLIVAYQQSMPEKRKL----------------------------IYCSR 33
Query: 103 THSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREVSLLR-GSAQNNACR 151
T S++ + + EL+ YR + + L SR+ LC+H V + GS + CR
Sbjct: 34 TMSEIEKALMELEALMKYRTEQLGHEEDFRGLGLTSRKNLCLHPSVKREKSGSVVDARCR 93
Query: 152 FLC--------KKGTN-RRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFM 202
L ++G N C +H + D ++++ + + + ++ G CPYF
Sbjct: 94 SLTAGFVKEKKERGENVDLCVYHDNL-DLLESHNLIPNGVWTFDGILRYGEEHKQCPYFT 152
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSG 261
R + + ++V Y+YL+DP + + ++ K+ I++FDEAHN++ +C ++ S D++
Sbjct: 153 ARRMMQYCNVVIFSYHYLLDPKIAERVTKDFSKDCIVVFDEAHNIDNVCIESLSTDITED 212
Query: 262 LLTACISEAKNC----IDISSTRRGQ-------------SSDETLNPDNFAILRALLLKL 304
L A+N D+ T + Q +DE D F L +L
Sbjct: 213 SLRRATRGAQNLKQKIADMRETDQEQLQNEYEKLVQGLREADEARQEDAFMANPVLPEEL 272
Query: 305 EKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKK 364
+ I E + +I L A + ET + L+E KK
Sbjct: 273 LREAVPGNIRRAEHFVSFLQRFIEYLKAGAPVISETPPSFL-------AHLKEHTFIEKK 325
Query: 365 STTAC--RIESISNILKIIFRD--KGTAHSAYYRVHVREADANAADVLKGKASRT----- 415
C R+ S+ L++ D + A + V D +L+ S T
Sbjct: 326 PLGFCAERLTSLVRTLELTNIDDYQPLQEVATFATLVATYDKGFLLILEPYESDTAEVPN 385
Query: 416 --LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSK 472
L + C + IA++ F R S+I+TSGT+SP++ + + L + ++ + +
Sbjct: 386 PILHFTCLDAAIAIRPVFDRFY--SVIITSGTISPLEMYPKMLDFSTVIQESYSMTLARR 443
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
IV G +++S++ R+ + GN + A+I PDGL++FFPSY M+
Sbjct: 444 SFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFAKITPDGLVVFFPSYLYMESI 503
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
I+ W+ G L +W K+K +VE + LA+E Y + + GA+ V
Sbjct: 504 ISMWQGM--GILDEVW----KYKLILVETPDAQETSLALETY--RTACCNGRGAILLCVA 555
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGKVSEG+DF GR V+ G+PF ++ + E+L +ET +
Sbjct: 556 RGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFL-----------RETYR--IK 602
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
D+ + A R Q +GRV+R + DYG ++ D RF ++ Q+ WI
Sbjct: 603 ENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRPQLPKWI 650
>gi|145355132|ref|XP_001421822.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582061|gb|ABP00116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 849
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 187/708 (26%), Positives = 300/708 (42%), Gaps = 125/708 (17%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRGSAQ- 146
++ SRTHSQL QVI ELK + + + + + R QLC++ V L +A+
Sbjct: 179 VILCSRTHSQLTQVIGELKRTVFGGSVANAEEQVAVAAVAGRAQLCVNPAVKSLGSAARI 238
Query: 147 NNACRFLCK-------KGTNRRCNHHSRVADYMKNNPHLG-DEPIDIEDLVNIGRTFGPC 198
N C + K K + C + S+ M +P+DIEDL +G + C
Sbjct: 239 NERCLDMSKGKAKPGEKTKIKACPYLSKRRKAMLELKEAALAKPMDIEDLAKLGESSRAC 298
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA-------HNLEGICA 251
PY+ R D+V PY L+ R+ LGV+ +N++++FDEA HN G
Sbjct: 299 PYYAARSALPEADLVLMPYASLLHADTREILGVKLENAVVVFDEAHNLVDAVHNSYGAAV 358
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
+ +LT + K + ++ R + TL I RA + L K +
Sbjct: 359 TLNQLSDVNDMLTEYVERFKTRLSANNLRYLR----TLTN----ITRAFVKVLAKETEDE 410
Query: 312 PINSKELGFTKPGPYIYELLAD-LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR 370
K L T +++E D +N+ Y L+E K+ +K ++ R
Sbjct: 411 SKPQKRL--TTLNDFLFECGQDTVNMFSLRRY------------LKESKVAHKIASYGER 456
Query: 371 IESISNI------LKIIFRDKGTAH---SAYYRVHVREADANAADVLKGKAS-------- 413
+ S N+ ++ I R K +A RV A + D L S
Sbjct: 457 VRSGENMSVDGVKMETIGRTKVAVAPDPNAAPRVGAVHALTSLIDALASADSDGRMIYER 516
Query: 414 -------RTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFP-LRV 463
TL + + A F R+ + S+IL GTL+P+ +L FP L+
Sbjct: 517 ATPEGDPATLRFVLLD---AASRFKRVVEQARSVILVGGTLAPIPELVAQL---FPDLQS 570
Query: 464 ENP--------------HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIV 509
+ H+I + + GP+G L+ ++ R + ELG ++
Sbjct: 571 QTAPAPGARQLKTFTCGHIIPRDNLLPIALSAGPTGVALDFTHGARADVSVIDELGRILL 630
Query: 510 NIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPL 569
N R+ P G +FFPS+ D+ A W++T G + +I K EPR +S
Sbjct: 631 NACRVSPGGACVFFPSFKYADEVYARWEST--GAMASIR----GVKDVYREPRDASTLEQ 684
Query: 570 AIEDYMAKLK---DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
+ DY A + T GAV V GK+SEG++F D GR VV+ G+P+A + D +++
Sbjct: 685 CLRDYAASVSRGASTRNGGAVLLCVVGGKLSEGINFKDELGRLVVMVGLPYANVADAELK 744
Query: 627 LKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCD 686
+ ++LD +QG G +Y R VNQ++GR IRH DY I+ CD
Sbjct: 745 ARMDHLDTGPGNQG-----------RGRAYYEALCMRGVNQSIGRAIRHVGDYACILLCD 793
Query: 687 ER---FAHPSRKSQISL------WIQPHIQCYSK-FGDVVYTLTRFFR 724
+R F + S+ WI+ + + +G+ + +FFR
Sbjct: 794 KRWGAFGSATNGSRTKAAKALPEWIEQRLVVPQRNYGEAHGRVAQFFR 841
>gi|319411548|emb|CBQ73592.1| related to CHL1-protein of the DEAH box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNF--PLRVEN---PHVITSKQIWAGIVPVGPSGYLL 488
E S+IL GT+ PM F Q+L L F P R+ HVI + ++ P G
Sbjct: 627 EARSVILAGGTMEPMSDFRQQL-LPFVPPDRLVTFSCGHVIPPSNLMVSVLSASPKGLPF 685
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
+ +RD++E ELG T+ N+ I+P GL++F PSY +D+ +A WK+ + G +
Sbjct: 686 EFKFDSRDNLELVDELGRTLANLCNIIPAGLVVFVPSYAFLDKVMARWKDAASGG---VL 742
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKL--KDTSTSGA-----VFFAVCRGKVSEGLD 601
+R+ KK EP+ + + +Y A + KD T A + FAV K+SEG++
Sbjct: 743 QRLGSKKKIFTEPKTTMEVDKVLGEYTAAIRAKDAKTGAAGGGGAIMFAVVGAKLSEGIN 802
Query: 602 FADHAGRAVVITGMPFATMTDPKVRLKREY---LDLQAQSQGGEYKETKLSFLSGEDWYN 658
F+D R VV+ GMPFA M P++ + +Y L ++++S G K + G + Y
Sbjct: 803 FSDDLARGVVMVGMPFANMHSPELAERMKYVRELGVKSESNGTSSSTNKAAIDPGHELYT 862
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYT 718
+AVNQ++GR +RH++DY A+I D R+A P + ++ WI+ + +FG ++
Sbjct: 863 NLCMKAVNQSIGRAVRHQNDYAALILLDRRYARPEIRQRLPGWIRDQVTVADRFGGMIQQ 922
Query: 719 LTRFFR 724
FFR
Sbjct: 923 TAAFFR 928
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 88/175 (50%), Gaps = 23/175 (13%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP-----------KMVILGSREQLCIHREVSLL- 141
LP ++Y SRTHSQL Q + ELK + + + + LGSR+Q+CI+ EV +
Sbjct: 243 LPRVIYASRTHSQLSQFVAELKKTLFGQVDILDFEKLPVRTIGLGSRKQMCINEEVQRIG 302
Query: 142 --RGS-AQNNACRFLCK-KGTNRRC------NHHSRVADYMKNNPHLGDEPIDIEDLVNI 191
RGS A N C L K K +C + R A ++ E DIEDLV +
Sbjct: 303 RSRGSEAMNERCLELMKAKKGKTKCPSLPPFDQVGR-AQVLEFRDAAMAEVGDIEDLVQL 361
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
G+ CPYF R K ++V PYN L+ R LG+ + I++ DEAHNL
Sbjct: 362 GKQTKTCPYFAARSSAKQAELVTLPYNLLLQKDARNALGISLEGCIVLIDEAHNL 416
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 DVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
+ +FP+ +AY QL M +V ++++ L ESPTGTGK+L L+CA W
Sbjct: 25 EFQFPYPQAYSIQLDLMRQVFSTIEDGKVGLFESPTGTGKSLSLICAAFTW 75
>gi|308810260|ref|XP_003082439.1| DNA repair/transcription factor protein (ISS) [Ostreococcus tauri]
gi|116060907|emb|CAL57385.1| DNA repair/transcription factor protein (ISS) [Ostreococcus tauri]
Length = 792
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 184/748 (24%), Positives = 323/748 (43%), Gaps = 131/748 (17%)
Query: 21 QLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGS 80
++ YM ++ ++L + + +E PTGTGKT+ +L +++
Sbjct: 46 KVAYMREMKRALDARGHGAVEMPTGTGKTITVLSMCVSY--------------------- 84
Query: 81 QSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT---------SNYRPKMVILG--SR 129
Q ++ I+Y +RT ++ +V++E+K +M+ LG SR
Sbjct: 85 -------QLAHPEVGKIIYCTRTVPEMEKVLEEMKALQAYIEKELGAETARMLSLGLSSR 137
Query: 130 EQLCIHREVSLLRGSAQ--NNACRFLCKKGTN-RRCNHHSRVA----------------- 169
+ +C++ V+ GS + + CR L RR +R A
Sbjct: 138 KNMCVNPAVAD-EGSRESVDGRCRRLTASWVRERRLERQARDAGRTVAAEDGEGDNEGGV 196
Query: 170 ---DYMKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
D+ + G++ + + DL GR CPYF+ R + +++ Y Y+
Sbjct: 197 SCCDWFEEFETAGEKAVLPPGVYTLHDLRQFGRAKKWCPYFLARNMISFANVIVYNYQYM 256
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST 279
+DP + K +++FDEAHN++ +C +A S +L L A I +
Sbjct: 257 LDPKVASLVSSALEKECVVVFDEAHNIDNVCIEALSVNLRQQTL----ENAGRSITSLNA 312
Query: 280 R--RGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK------PGPYIYELL 331
R + + +DE LR +L +A+ + ++ G P + E +
Sbjct: 313 RIDKAKQTDERR-------LRQEYERLVNGLAQQGVLARGGGEDMLMNPVIPDDILREAV 365
Query: 332 ADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIES--ISNILKIIFRD----- 384
NI + A + +++ E L+ +LQ ST C + LK++ R
Sbjct: 366 PG-NIRR--AEHFVAVLKRFVEYLKF-RLQ---STQHCAANAGIDGKTLKVLLRSPDESV 418
Query: 385 ---KGTAHSAYYRVHVR-EADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSII 439
+G H R+ V E D+ +G S T + C + +A++ F R + S+
Sbjct: 419 EDARGGRHGRVQRIVVGGELCCARGDIFQGFRSHTRALACLDASLAIKPVFERFQ--SVF 476
Query: 440 LTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIE 499
+TSGTLSP+D + + L N +T + + ++ G +++ + RD
Sbjct: 477 ITSGTLSPIDLYPKLLGFNPVCAKSLEMTLTRECLCPMVITRGADQQAVSTKFDVRDDPN 536
Query: 500 YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV 559
Q G +V +A+ VPDG++ FF SY M+ ++ W T I I +HK +
Sbjct: 537 VIQNYGRILVGLAQTVPDGIVAFFVSYSYMENIVSKWHETG------ILREIMQHKLVFI 590
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
E LA+++Y + GA+F +V RGKV+EG+DF H GRAVV+ G+P+
Sbjct: 591 ETTDVVETSLALDNY--RRACNCGRGAIFLSVARGKVAEGIDFDRHYGRAVVMYGVPYQY 648
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+R + EYL Q + ++ L+F A R Q VGRVIR + DY
Sbjct: 649 TLSRILRARLEYLRETFQIKESDF----LAF---------DAVRQAAQCVGRVIRSKKDY 695
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQ 707
G ++F D+R+ ++ ++ WI H+
Sbjct: 696 GLMVFADKRYNSQDKRGKLPGWITSHLH 723
>gi|154296465|ref|XP_001548663.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 764
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 177/719 (24%), Positives = 312/719 (43%), Gaps = 95/719 (13%)
Query: 29 IQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQ 88
+++L + +LE P+GTGKT+ LL +A+++ L
Sbjct: 1 MRTLDAGGHCVLEMPSGTGKTISLLSLIVAYQQYYPEHRKL------------------- 41
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREV 138
+Y SRT S++ + + ELK YR + + L SR+ LC+H V
Sbjct: 42 ---------IYCSRTMSEIEKALAELKALMKYRAEQLGHQEDFRGLGLTSRKNLCLHPSV 92
Query: 139 SLLRGSAQNNA-CRFLCKKGTNRRCNHHSRVADYMKNNPH--LGDEPIDIEDLVNIGRTF 195
+ A +A CR L + V + PH + + ++ ++ G
Sbjct: 93 KREKSGAVVDARCRSLTAGFVKEKKERGEDVPNLDLLEPHNLIPNGVWTLDGIMRYGEEH 152
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAA 254
CPYF +R + +++ Y+YL+DP + + E K+ I++FDEAHN++ +C ++
Sbjct: 153 KQCPYFTSRRMMSFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESL 212
Query: 255 SFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPIN 314
S D++ L A N S R S E L + ++ L E R + ++
Sbjct: 213 STDITDDSLRRATRGAMNLESRISDLR-DSDSEKLKDEYAKLVEGLRGADEARAEDAFMS 271
Query: 315 SKEL-----------GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELL---QEDK 359
+ L + ++ L + ++T K+ ++ E A L +E
Sbjct: 272 NPALPDDLLKEAVPGNIRRAEHFVVFLKRFIEYLKKTRMKVRQVISETPASFLAHLKEYT 331
Query: 360 LQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
KK C R+ S+ L++ I + A + V + +L+ S T
Sbjct: 332 YIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPYESDT 391
Query: 416 -------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPH 467
L + C + IA++ F R S+I+TSGT+SP++ + + L ++ P
Sbjct: 392 AEVPNPVLHFTCLDAAIAIKPVFERF--SSVIITSGTISPLEMYPKMLNFECVVQESYPM 449
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
+ + IV G ++S ++ R+ + GN + ++++ PDG+++FFPSY
Sbjct: 450 TLARRSFLPMIVTRGSDQVAISSGFQVRNEPAVVRNYGNLLTEMSKLTPDGMVVFFPSYL 509
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAV 587
M+ I+ W+ G L +W K+K +VE + LA+E Y + + GA+
Sbjct: 510 YMESIISMWQGM--GILDEVW----KYKLILVETPDAQETSLALETY--RTACCNGRGAI 561
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
V RGKVSEG+DF GR V+ G+PF ++ + E+L +ET
Sbjct: 562 LLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFL-----------RETY 610
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ + A R Q +GRV+R + DYG ++ D RF +++Q+ WI I
Sbjct: 611 R--IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFL--KKRTQLPKWINQAI 665
>gi|258566511|ref|XP_002584000.1| hypothetical protein UREG_06967 [Uncinocarpus reesii 1704]
gi|237907701|gb|EEP82102.1| hypothetical protein UREG_06967 [Uncinocarpus reesii 1704]
Length = 593
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 158/596 (26%), Positives = 272/596 (45%), Gaps = 50/596 (8%)
Query: 132 LCIHREV-SLLRGSAQNNACRFLCKKGT--NRRC------NHHSRVADYMKNNPHLGDEP 182
+CI+++V SL +A N C L + G +++C + S + D+ H+ +
Sbjct: 1 MCINQKVRSLGNATAINERCLDLQRPGVPPDQKCPFAPSQENESAINDF---RDHVLAKV 57
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
DIED+ IG G CPY+ TR + +IV PY L+ R+ L + K+ ++I DE
Sbjct: 58 QDIEDIGKIGERMGICPYYATRSVIGHSEIVTLPYPLLLQKSAREALDISLKDHVIIIDE 117
Query: 243 AHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLL 302
AHNL + A+ S +S L + + TR + + ++ ++L
Sbjct: 118 AHNLMDVIANIHSVTISLKQLQTALEQVTVYAKKYKTRL-KGKNRVYIAQVMRLIASILK 176
Query: 303 KLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN 362
LE +A + G +P +L++ I Q +KL + LQE KL
Sbjct: 177 YLESNVATKGLMD---GTVEPS----QLMSGKGIDQINPHKL-------SRYLQESKLAR 222
Query: 363 KKSTTACRIESISNILKIIFRDKGTAHSAYYRVH-----VREADANAADVLKGKASRTL- 416
K + +S+ + + TA +++ + A + S L
Sbjct: 223 KIDGYLEKSKSLEEKVN----GQRTAVPVLFQIQSFLLSLMNPAAEGRLFFENTGSDILL 278
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP---LRV-ENPHVITSK 472
+ +P +E E ++IL GT+SPM ++ L P LR HVI ++
Sbjct: 279 KYMLLDPTEHFREVVE-EARAVILAGGTMSPMTDYSDHLFSYLPPEKLRTFSYGHVIPTE 337
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
+ A + G + ++ R S + +LG TIV + +++PDG++ FFPSY + Q
Sbjct: 338 NLTARPISRGIGNTEFDFTFEKRKSSDMMLDLGQTIVEMCKVIPDGVVAFFPSYKFLQQV 397
Query: 533 IACWKNTSHGNL-TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVFF 589
+ WK G+ I E I K + E ++ + IE+ + K + GA+
Sbjct: 398 LEAWKYFPSGSTGPKIIETIGLLKPLLYESQEEN---TNIEELLRKYTNLIDEGKGALLL 454
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QSQGGEYKETK 647
+V GK+SEG++F+D GR V++ G+PF + + K +Y++ +A ++ G E
Sbjct: 455 SVMGGKLSEGINFSDRLGRGVIVIGLPFPNVRSAQWEAKMKYVEHRAYEKAAGPEGSRRS 514
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+ L+ ++Y R VNQ +GR IRH+ DY AI D R+ +S++ LWI+
Sbjct: 515 QAKLASREFYENACMRVVNQCIGRAIRHQQDYAAIFMLDRRYETQRIQSKLPLWIR 570
>gi|38455500|gb|AAR20847.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455503|gb|AAR20849.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455507|gb|AAR20851.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455515|gb|AAR20856.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455523|gb|AAR20861.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 167/624 (26%), Positives = 289/624 (46%), Gaps = 70/624 (11%)
Query: 124 VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADYMKNNPHLGD 180
++L SR+ +CIH EVS R G A + C L R + + + Y + G
Sbjct: 23 LVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQYFEGFSLEGK 82
Query: 181 E---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW- 233
E P+ I+DL GR+ CPYF+ R IV Y+YL+DP + + E
Sbjct: 83 ESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMS 142
Query: 234 KNSILIFDEAHNLEGICADAASFDLS--------------SGLLTACISEAKNCIDISST 279
+ S ++FDEAHN++ +C D+ S ++ + L+ E N ++
Sbjct: 143 RESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQ 202
Query: 280 RRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PYIYELLAD 333
R Q D ++ D IL +L + VP N + L F + YI L
Sbjct: 203 RMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRV 262
Query: 334 LNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI-----LKII--FR 383
++ QE+ + ++++++ E K ++ ++ R IS++ L +I F
Sbjct: 263 HHVVQESPAGFLK--DISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFA 320
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTS 442
+ ++ + + + D V ++ L + C + IAM FSR + ++++TS
Sbjct: 321 TLVSTYTKGFTIIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRFQ--TVVITS 374
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
GTLSPMD + + L + + + + IV G ++S + R+ +
Sbjct: 375 GTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIR 434
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
G +V +A+ VPDG++ FF SY ++ +A W + I + + ++K +E +
Sbjct: 435 NYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLRYKLLFIETQ 488
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++ G+P+
Sbjct: 489 DNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQS 546
Query: 623 PKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
++ + +YL Q Q + ++ L+F A R Q VGR +R + DYG +
Sbjct: 547 RILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRALRGKTDYGIM 593
Query: 683 IFCDERFAHPSRKSQISLWIQPHI 706
IF D+RF+ ++S++ WIQ H+
Sbjct: 594 IFADKRFSRHDKRSRLPKWIQEHL 617
>gi|38455521|gb|AAR20860.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 167/624 (26%), Positives = 289/624 (46%), Gaps = 70/624 (11%)
Query: 124 VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADYMKNNPHLGD 180
++L SR+ +CIH EVS R G A + C L R + + + Y + G
Sbjct: 23 LVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQYFEGFSLEGK 82
Query: 181 E---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW- 233
E P+ I+DL GR+ CPYF+ R IV Y+YL+DP + + E
Sbjct: 83 ESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMS 142
Query: 234 KNSILIFDEAHNLEGICADAASFDLS--------------SGLLTACISEAKNCIDISST 279
+ S ++FDEAHN++ +C D+ S ++ + L+ E N ++
Sbjct: 143 RESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQ 202
Query: 280 RRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PYIYELLAD 333
R Q D ++ D IL +L + VP N + L F + YI L
Sbjct: 203 RMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRV 262
Query: 334 LNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI-----LKII--FR 383
++ QE+ + ++++++ E K ++ ++ R IS++ L +I F
Sbjct: 263 HHVVQESPAGFLK--DISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFA 320
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTS 442
+ ++ + + + D V ++ L + C + IAM FSR + ++++TS
Sbjct: 321 TLVSTYTKGFTIIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRFQ--TVVITS 374
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
GTLSPMD + + L + + + + IV G ++S + R+ +
Sbjct: 375 GTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIR 434
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
G +V +A+ VPDG++ FF SY ++ +A W + I + + ++K +E +
Sbjct: 435 NYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLRYKLLFIETQ 488
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++ G+P+
Sbjct: 489 DNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQS 546
Query: 623 PKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
++ + +YL Q Q + ++ L+F A R Q VGR +R + DYG +
Sbjct: 547 RILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRALRGKTDYGIM 593
Query: 683 IFCDERFAHPSRKSQISLWIQPHI 706
IF D+RF+ ++S++ WIQ H+
Sbjct: 594 IFADKRFSRHDKRSRLPKWIQEHL 617
>gi|145512032|ref|XP_001441938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409199|emb|CAK74541.1| unnamed protein product [Paramecium tetraurelia]
Length = 927
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 184/340 (54%), Gaps = 20/340 (5%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
T+ WC P +A Q + S++LTSGTLSP+ S+ EL++NF + +PH+I +Q
Sbjct: 472 TIYMWCLEPSLAFQRILSKNIHSVLLTSGTLSPLQSWTCELRMNFQTQFSSPHIINIQQ- 530
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
++ + + SY+ R++ E LG ++N + ++P+G+L+ F SY LM
Sbjct: 531 --NLIVFQHKQF--DFSYQQRNNDEQFNRLGQNLLNYSYVIPNGILVIFSSYSLM----- 581
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
+K S + + R+ + K + EP+Q+ + +++ K S GA+ FAV RG
Sbjct: 582 -FKFRSKLTTSKLLFRLNEIKHCLWEPQQT----VEMQNVFELYKQHSKKGAIMFAVQRG 636
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KV+EG+DF+D RAV + G+P+ D KV K EYL+ E+ + L +
Sbjct: 637 KVAEGIDFSDELCRAVFLVGVPYPPKQDHKVSQKMEYLE--KIYNDPEFNDQDR--LKSQ 692
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
+WY QQA RA NQA+GRVIRH +DYG + CD+RF + + S W++ ++ ++ +
Sbjct: 693 EWYCQQAIRATNQALGRVIRHVNDYGIVFLCDKRFEYTDIRKGFSEWVKTALKPWANDDE 752
Query: 715 VVYTLTRFF-REERICGSTNLKLIKTEVSGDVRELKPVDL 753
V+ F+ R + + + K++ E S E+K +L
Sbjct: 753 VLKQTKAFYNRTDNNFQTPSQKIMTEEKSSQQSEVKKRNL 792
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 147/272 (54%), Gaps = 37/272 (13%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTL 69
++ FP + YD QL YME V+QSL K NALLESPTGTGKTL LLCA+L W L
Sbjct: 54 EIYFPHKPYDVQLKYMESVVQSLDRKHNALLESPTGTGKTLSLLCASLGW---LSKHRKE 110
Query: 70 GSQVNNQISGSQSSVNSSQSGDSKLPT---ILYTSRTHSQLRQVIQELKTSNYRPKMVIL 126
+ NN PT I+Y SRTH+QL+QV QELK + Y+P + +L
Sbjct: 111 QQKANN-------------------PTKLRIIYASRTHAQLKQVAQELKKTVYKPNVSVL 151
Query: 127 GSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSR-VADYMKNNPHLGDEPI-- 183
GSR+Q C+ + ++G+ N CR + K +C + + V +M L + +
Sbjct: 152 GSRDQYCLRGDFYNIKGNLLNQNCRKVVKAN---QCQYFKKDVVMFMA----LQYKTLIN 204
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
++E+ G CPY+ R+ DI+ PYNYL++ F+ + ++ NSILIFDEA
Sbjct: 205 NLEEAKQFGYKNKICPYYFERQRMDEADIILLPYNYLLEKDFQDYVNID--NSILIFDEA 262
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCID 275
HN++ + +SF ++ ++ + + ID
Sbjct: 263 HNVQSTAEEGSSFFITQNIIIEAEKDLEKWID 294
>gi|403338080|gb|EJY68268.1| hypothetical protein OXYTRI_11217 [Oxytricha trifallax]
Length = 779
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 191/793 (24%), Positives = 356/793 (44%), Gaps = 132/793 (16%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M+++ ++L ++ +A+LE PTGTGKT+CLL L++ K+ + N ++ ++
Sbjct: 1 MKELKKTLDSEGHAILEMPTGTGKTVCLLSLILSYIKA--------KKPNFKLIYCTRTI 52
Query: 85 NSSQSGDSKLPTILY-------TSRTHSQLRQVIQELKTSNYR------PKMVI-LGSRE 130
+ +L +L + ++H Q Q + ++ N + P + + L SR
Sbjct: 53 VEMEKTLEELKFVLEQREKDFPSDQSHQQQFQNMTLEESKNQQNQDLNSPILALCLSSRR 112
Query: 131 QLCIHREVSLLRGSAQ-NNACRFLC-----------KKGTNRRCNHHSR----------V 168
LCIH EVS + ++ CR L + G++ N+ + +
Sbjct: 113 NLCIHPEVSKDDDRERVDSKCRQLTASWVREDALQQRGGSSVFLNNDTSSKIMTNVIPDI 172
Query: 169 ADYMKNNP---------HLGDE------PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIV 213
D KN + D+ +EDL G+ CPYF+ R +I+
Sbjct: 173 EDLHKNMKLCAFYETFWNRADQFTMPKGVYTLEDLRAFGKKHKMCPYFLARHFLLQANII 232
Query: 214 FAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
Y Y++DP + E K+ I++FDE HN++ C +A S ++S L + +
Sbjct: 233 VYNYAYMLDPKISNLVSKELQKDCIVVFDECHNIDNACIEAFSLNISRKTLELASNNLRK 292
Query: 273 CID------ISSTRRGQSSDE------TLNPDNFAILRALLLKLEKRIAEVPINSKEL-- 318
D +SST R Q + L +N I + EK + P+ ++++
Sbjct: 293 LEDMVKEEKVSSTSRLQDEYKRLVEGLVLGGENKGIQLS-----EKELLSHPLLAQDVLK 347
Query: 319 ----GFTKPGPYIYELLADLNITQETAYKLIDI-VEVAAELL---QEDKLQNKKSTTAC- 369
G + + L + + + K ++ ++ +L+ Q + +++S
Sbjct: 348 EAVPGSIRKAEHFINFLRRIIVCLKEELKTREVKIQTPLQLIYTFQGNYFLDQRSLKFAH 407
Query: 370 -RIESISNILKI----------IFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSW 418
R+ S+ N L+I I D T S YY+ + D L L +
Sbjct: 408 DRLSSLMNTLQIAAVDEFNPINIVADFATLLSTYYKGFSVIIEPYPQDNLIYDP--LLQF 465
Query: 419 WCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ-IWA 476
+C + IA + F+R ++I+TSGT+SP++ + + L P + ++I + +
Sbjct: 466 YCLDASIATKPVFNRFR--NVIMTSGTISPIEIYPKMLDFQ-PKTMRAFNIILPRNAVQP 522
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
IV G ++S + R++ + GN ++ ++ IVPDG++ FF SY M+ I W
Sbjct: 523 LIVTKGVDQLQISSKFDERENQGNIRNYGNLLIELSSIVPDGIVCFFTSYKYMEHIIIKW 582
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKV 596
I +++ ++K +E + + LA+E+Y K + GAVFF++ RGKV
Sbjct: 583 DEMG------ILQKVRENKLIYIETKDNFETILALENY--KQACDNGRGAVFFSIARGKV 634
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF-LSGED 655
SEG+DFA H GR V++ G+P+ ++ + ++L K +F + D
Sbjct: 635 SEGVDFAGHYGRCVIMFGIPYQNTLSRNLKARMQFL--------------KENFGIREND 680
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK---F 712
+ A R +Q VGRV+R ++DYG +IF D+R++ ++ + +WI+ ++ ++
Sbjct: 681 FLTFDAMRQCSQCVGRVLRSKYDYGLMIFADKRYSRSDKQDKFPIWIRNQLEARNQNISI 740
Query: 713 GDVVYTLTRFFRE 725
+ T FF+E
Sbjct: 741 DIAIQTANTFFKE 753
>gi|449672585|ref|XP_004207744.1| PREDICTED: Fanconi anemia group J protein homolog, partial [Hydra
magnipapillata]
Length = 372
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 148/256 (57%), Gaps = 21/256 (8%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
+ W C NP + E R +IL+SGTLSPM SFA EL ++FP+ E H+I+ Q+W
Sbjct: 109 IKWCCLNPAVVFSEVGR-HSRCVILSSGTLSPMSSFASELGIDFPITYEGNHIISDSQVW 167
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
+ VGPSG ++N++Y N ++ ++ ++GN +++I +P G+L FFPSY++M++
Sbjct: 168 VSTLSVGPSGNVINANYTNSETFLFQDDIGNILLHICEAIPRGILCFFPSYHMMEKLHKR 227
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPR--QSSLFPLAIEDYM--AKLKDTSTSGAVFFAV 591
W+ T + +++ K EPR + +F ++ + + +GA+ AV
Sbjct: 228 WEATG------LLDKMSAFKVVFSEPRGNEKKVFDETLKQFYECVTTDNGKINGALLLAV 281
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
CRGKVSEGLDF+D RAVV G+PF + D V LKR+Y DL S+G L
Sbjct: 282 CRGKVSEGLDFSDDNARAVVAVGIPFPNVKDLSVTLKRKYNDLYF-SKG---------LL 331
Query: 652 SGEDWYNQQASRAVNQ 667
SG +WY QA RA+NQ
Sbjct: 332 SGNNWYELQAFRALNQ 347
>gi|341891975|gb|EGT47910.1| hypothetical protein CAEBREN_01520 [Caenorhabditis brenneri]
Length = 714
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 172/715 (24%), Positives = 313/715 (43%), Gaps = 111/715 (15%)
Query: 43 PTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
P+GTGKT+ LL LA+ S +L ++Y SR
Sbjct: 2 PSGTGKTVSLLSLVLAYMISYPD---------------------------RLDKLVYCSR 34
Query: 103 THSQLRQVIQELKT-SNYRPK---------MVILGSREQLCIHREVSLLR-GSAQNNACR 151
T ++ + ++E++ +Y K V + +R+ LCI+ +V+ LR G+ ++AC+
Sbjct: 35 TIPEIEKCVEEMRVLYDYWEKETGMPVAKITVAMSARKNLCINEKVAALRFGNTVDSACQ 94
Query: 152 FLCKKGTNRRCNHHSRV--ADYMKNNPHLG----DEPIDIEDLVNIGRTFGPCPYFMTRE 205
L + + D+ +N G + ++E+L +GR CPYF R
Sbjct: 95 KLTSSSVRAKKQEDPSIEGCDFFENFEANGFPMQNGVWNLENLRTLGREKKICPYFTARN 154
Query: 206 LQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLT 264
IV Y+Y++DP + + ++ + S+++FDEAHN++ +C ++ S +S
Sbjct: 155 AINRAHIVVYSYHYILDPKIAELVSKDFSRKSVVVFDEAHNIDNVCIESMSVAISQKNAD 214
Query: 265 ACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK------RIAEVPINSKEL 318
+ E +N + R ++ E L + ++ L K E+ R+A I L
Sbjct: 215 RALQELQNLEGVVG-RMKTANSEKLKTEYDRLVEGLR-KAERERANDERLANPCIPDDIL 272
Query: 319 GFTKPGP---------YIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTAC 369
PG ++ + + T LI+ + +QE ++ C
Sbjct: 273 KEAVPGNIRQANHFLLFLKRFVEYVRHRLRTHQVLIESPASFMKDIQERMCIERRPMRFC 332
Query: 370 RIESISNILKII-FRDKG---------------TAHSAYYRVHVREADANAADVLKGKAS 413
E +SN++K + D G + +S + V + D + +L
Sbjct: 333 -AERLSNLVKTLEITDNGDVWALSQVTTLCTLVSTYSRGFSVIIEPQDGSQMAML----- 386
Query: 414 RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
TLS C + IA++ + S+I+TSGTLSP++ + + L + + +
Sbjct: 387 -TLS--CHDASIAIRPVLKRH-QSVIITSGTLSPLEMYPKILDFDPAVVASFTMTLARPC 442
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+ +V G + S + R + + GN ++ +A +VPDG+++FF SY M+ I
Sbjct: 443 LAPLVVARGNDQVAMTSRFEQRADVAVIRNYGNLVLEMASLVPDGMVVFFTSYLYMENVI 502
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
W I + + K+K +E + A+E Y+ S GAV F+V R
Sbjct: 503 GVWYEQH------IIDELMKYKLLFIETNDALETSAALEKYVEACD--SGRGAVLFSVAR 554
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF-LS 652
GKVSEG+DF+ H GR V++ G+P+ +R + EYL + +F +
Sbjct: 555 GKVSEGIDFSHHLGRCVIMLGIPYMYTESRVLRARLEYL--------------RDTFNIR 600
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
D+ A R Q +GR +R + DYG ++F D+RF+ ++ ++ W+Q +++
Sbjct: 601 ENDFLTFDAMRHTAQCMGRALRSKTDYGLMVFADKRFSRTDKRGKLPRWMQEYLE 655
>gi|347831219|emb|CCD46916.1| similar to DNA repair helicase RAD3 [Botryotinia fuckeliana]
Length = 770
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 177/726 (24%), Positives = 316/726 (43%), Gaps = 103/726 (14%)
Query: 29 IQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQ 88
+++L + +LE P+GTGKT+ LL +A+++ L
Sbjct: 1 MRTLDAGGHCVLEMPSGTGKTISLLSLIVAYQQYYPEHRKL------------------- 41
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREV 138
+Y SRT S++ + + ELK YR + + L SR+ LC+H V
Sbjct: 42 ---------IYCSRTMSEIEKALAELKALMKYRAEQLGHQEDFRGLGLTSRKNLCLHPSV 92
Query: 139 SLLRGSAQNNA-CRFLCKKGTNRR---------CNHHSRVADYMKNNPHLGDEPIDIEDL 188
+ A +A CR L + C +H + D ++ + + + ++ +
Sbjct: 93 KREKSGAVVDARCRSLTAGFVKEKKERGEDVPVCIYHDNL-DLLEPHNLIPNGVWTLDGI 151
Query: 189 VNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLE 247
+ G CPYF +R + +++ Y+YL+DP + + E K+ I++FDEAHN++
Sbjct: 152 MRYGEEHKQCPYFTSRRMMSFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNID 211
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKR 307
+C ++ S D++ L A N S R S E L + ++ L E R
Sbjct: 212 NVCIESLSTDITDDSLRRATRGAMNLESRISDLR-DSDSEKLKDEYAKLVEGLRGADEAR 270
Query: 308 IAEVPINSKEL-----------GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELL 355
+ +++ L + ++ L + ++T K+ ++ E A L
Sbjct: 271 AEDAFMSNPALPDDLLKEAVPGNIRRAEHFVVFLKRFIEYLKKTRMKVRQVISETPASFL 330
Query: 356 ---QEDKLQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAADVL 408
+E KK C R+ S+ L++ I + A + V + +L
Sbjct: 331 AHLKEYTYIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLIL 390
Query: 409 KGKASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
+ S T L + C + IA++ F R S+I+TSGT+SP++ + + L
Sbjct: 391 EPYESDTAEVPNPVLHFTCLDAAIAIKPVFERF--SSVIITSGTISPLEMYPKMLNFECV 448
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
++ P + + IV G ++S ++ R+ + GN + ++++ PDG++
Sbjct: 449 VQESYPMTLARRSFLPMIVTRGSDQVAISSGFQVRNEPAVVRNYGNLLTEMSKLTPDGMV 508
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD 580
+FFPSY M+ I+ W+ G L +W K+K +VE + LA+E Y +
Sbjct: 509 VFFPSYLYMESIISMWQGM--GILDEVW----KYKLILVETPDAQETSLALETY--RTAC 560
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
+ GA+ V RGKVSEG+DF GR V+ G+PF ++ + E+L
Sbjct: 561 CNGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFL-------- 612
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL 700
+ET + D+ + A R Q +GRV+R + DYG ++ D RF +++Q+
Sbjct: 613 ---RETYR--IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFL--KKRTQLPK 665
Query: 701 WIQPHI 706
WI I
Sbjct: 666 WINQAI 671
>gi|354547011|emb|CCE43744.1| hypothetical protein CPAR2_213880 [Candida parapsilosis]
Length = 790
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 168/653 (25%), Positives = 300/653 (45%), Gaps = 70/653 (10%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRGSAQN 147
I ++SRTHSQL Q +L+ +++ R K + +GSR+QLC++ +VS + N
Sbjct: 186 IFFSSRTHSQLNQFSSQLRLTSFDSSFDDLTERTKYLPIGSRKQLCVNEKVSKCGDQSIN 245
Query: 148 NACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYFMTREL 206
+AC L K T C + ++ +K L I DIEDL +G CPY+ R+
Sbjct: 246 DACIDLQK--TKEGCTYLTKDQSLVKEFSDLSLSRIRDIEDLATLGTELHACPYYSVRKG 303
Query: 207 QKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
++ ++V PY L R G++ K++I+I DEAHN+ S +S L
Sbjct: 304 LESAEVVSLPYQLLFQKSARDAWGLDIKDAIIIIDEAHNVIDSITSLYSVQISVRQLHKV 363
Query: 267 ISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPY 326
+ K + + R LN N R ++KL K I +V E PG
Sbjct: 364 MQSLKVYLTKFAKR--------LNSGN----RINIIKLTK-ICKVLATFMESQEVSPGK- 409
Query: 327 IYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKG 386
E+ + +I Q++ L++I ++ L KS A +IES ++ G
Sbjct: 410 --EVKVE-DIFQDSTGDLVNIHKLDEYL--------TKSKIAYKIESY---IEKSEDSPG 455
Query: 387 TAHSAYYRV--------HVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSI 438
+ A + + + R+ D + + L + +P I E + +
Sbjct: 456 ASSPALFEIAKFLRALTNPRKEGKFYWDKIANEFQ--LRYMLLDPSIVFNEIV-ADAKCV 512
Query: 439 ILTSGTLSPMDSFAQELKLNFPLR----VENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
+L GT+ PM F L P H++ + + + + G + SY
Sbjct: 513 LLCGGTMEPMTDFTDFLMPQVPQHQIKAFSCQHIVPNDNL--KVFTIDKWGIEFDFSYNR 570
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+ ++LG I+ I ++VP G++IFF SY + + + W+ T+ +++++
Sbjct: 571 REDKSQMEKLGQFILQICKVVPHGVVIFFSSYNFLYKVVQYWQQTN------LFQKLTAF 624
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K EP SS + +Y + + + GA+ +V GK+SEG++F+D+ RAV++ G
Sbjct: 625 KTIFQEPTNSSNVDAVLSEY-SNVITSQEKGALLLSVVGGKLSEGINFSDNLARAVIMIG 683
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+ ++ KR +++ Q ++GG + K S ++Y +A+NQ++GR IR
Sbjct: 684 LPYPNAFSGEIIAKRAFIESQVLAKGGSLQSAK---ESSNEYYENLCMKAINQSIGRCIR 740
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
H +DY I D+R+ P ++++S W++ + V+ T+FF +R
Sbjct: 741 HGNDYALIYLVDKRYKQPRVQNKLSKWVKDRLVTDDS---VLDDSTKFFSSKR 790
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAW 59
PF YD QL M+ + +++N L ESPTGTGKTL ++C+T+ W
Sbjct: 13 PFAPYDIQLKLMDAIYDTIENGYKIGLFESPTGTGKTLSIICSTMTW 59
>gi|367011419|ref|XP_003680210.1| hypothetical protein TDEL_0C01100 [Torulaspora delbrueckii]
gi|359747869|emb|CCE90999.1| hypothetical protein TDEL_0C01100 [Torulaspora delbrueckii]
Length = 815
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 177/657 (26%), Positives = 288/657 (43%), Gaps = 79/657 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY------------RPKMVILGSREQLCIHREVSLLRG- 143
I Y SRTHSQL Q +L+ ++ R K V L SR+QLCI+ V +
Sbjct: 198 IYYASRTHSQLNQFASQLRLPSFPSSFADQQVPAERLKYVPLASRKQLCINENVKKWKTV 257
Query: 144 SAQNNACRFLCKKGTNRRCNHH---SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPY 200
A N+AC L K + + C +H S ++ ++ H + DIE+L +GR+ CPY
Sbjct: 258 DAINDACADLLK--SKKGCPYHQPSSTSSNLFRD--HTFTQVQDIEELAELGRSLHICPY 313
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSS 260
+ TR + +I+ PY YL+ R LG+ K+SI++ DEAHNL S ++
Sbjct: 314 YATRGSLENAEIITLPYQYLLSESTRTSLGINLKDSIVVIDEAHNLIETINSIHSAQIAL 373
Query: 261 GLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGF 320
L +C + + R LNP N L L+ + IN K
Sbjct: 374 TDLLSCNEGLRKYFERFRNR--------LNPGNRVNLMKLMELCNTLARYIKINYK---- 421
Query: 321 TKPGPYI--YELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNIL 378
KPG I ++ N+ +KL + +++ K+ +K T E N
Sbjct: 422 -KPGQEISSSDIFGSSNMDTLNIHKL-------NKYIKKSKIASKIDTYIHSFEDEKNAS 473
Query: 379 KIIFRDKGTAHSAYYRV-HVREADANAADVLKGK----ASRTLSWWCFNPGIAMQEFSRL 433
++ K ++ ++V +N A +G+ + + + PG + Q S L
Sbjct: 474 EV----KSSSTPLLFKVASFLSCLSNPAQ--EGRFFFEKGQVIKYMLLEPGKSFQ--SVL 525
Query: 434 EVGS-IILTSGTLSPMDSFAQELKLNFPLR----VENPHVITSKQIWAGIVPVGPSGYLL 488
E +IL GT+ P+ + L P + HVI + I +
Sbjct: 526 EDARCVILAGGTMQPISDLMENLFAGVPEEKISILSCDHVIPDANLRTYITQ--EPAFEF 583
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVP--DGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
R S+ L N ++R VP G++ FFPSY +D + W+
Sbjct: 584 TFEKRQAPSL-VNGALYNFFDKLSRSVPRSGGIVGFFPSYQYLDYVVDSWQREG------ 636
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+++++ +K E + + A + +A K GA+ FAV GK+SEG++F D
Sbjct: 637 LFDKLDHVRKIYFESKNGAEPLSAYSEAVAGGK-----GALLFAVVGGKLSEGINFQDDL 691
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
RAVVI G+PF + ++ +K +L+ + GG + K + ++Y +AVN
Sbjct: 692 CRAVVIAGLPFPNVFSGELLIKTRHLETKILRNGGSNHDAK---NAAREFYETICMKAVN 748
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
Q++GR IRH +DY I D+R+A S++S W+ +Q S D++ RFF
Sbjct: 749 QSIGRAIRHANDYSLIFLLDKRYAKLEINSKLSKWVSKRLQPQSSVTDIMADTQRFF 805
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSLQ-NKCNALLESPTGTGKTLCLLCATLAW-RKSLGSFSTLGS 71
P+E Y QL M+ + +L K A+LESPTGTGKTL L+C+ + W R++ G
Sbjct: 9 PYEPYGIQLELMQCIYDTLSLGKKLAILESPTGTGKTLSLICSVVTWLRQNKADLVASGG 68
Query: 72 QVNNQISGSQS 82
+SGS+S
Sbjct: 69 HNVGGLSGSES 79
>gi|215736805|dbj|BAG95734.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 596
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 156/600 (26%), Positives = 267/600 (44%), Gaps = 82/600 (13%)
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
+DIEDL +G+ G CPY+ R++ +T D+V PY L+ R+ LG+ KNS++I DE
Sbjct: 21 LDIEDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNLKNSVVIIDE 80
Query: 243 AHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLL 302
AHNL + ++S L A +S + ++ R QS L N ++ L +
Sbjct: 81 AHNLADSLTSMYNSKITSSQLNAILSHLEAYLN-----RFQS---VLGAGNRRYIQTLTV 132
Query: 303 KLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQN 362
L + V ++++ T I + L L+I KL V+ + + + N
Sbjct: 133 -LTRSFLRVLTSNQDDACTMTSMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYAN 191
Query: 363 KKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLK--------GKASR 414
K + + +S+ + D+G++ +++ + AD L+ G+
Sbjct: 192 KLNINQDGVNHLSHQQQY---DEGSSIASFQTL---------ADFLRSLLNCNDNGRIIV 239
Query: 415 TLSWWCFNPGIAMQEFSRL-----------EVGSIILTSGTLSPMDSFAQELKLNFPLR- 462
+ P A +F L + ++IL GTL P++ L N P
Sbjct: 240 ARKKFSGQPEDAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPPSD 299
Query: 463 ---VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
H++ + I V GPSG + SY +R S +ELG + N+ VP+G+
Sbjct: 300 IKFFTCNHIVPPESILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPEGV 359
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
++FF SY W + + +I K K EP+ S + + Y ++
Sbjct: 360 VMFFASYEYERFVYDAWAASG------MISKISKKKHVFREPKNSVDVEMTLNKYKEAIQ 413
Query: 580 -------DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYL 632
DT +GA+ AV GK+SEG++F+D GR VV+ G+P+ + +D ++ +Y+
Sbjct: 414 SCSKSSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTETIKYI 473
Query: 633 DLQAQ--------SQGGEY-KETKLS---------FLSGEDWYNQQASRAVNQAVGRVIR 674
+ ++ S +Y E KL G ++Y +AVNQ++GR IR
Sbjct: 474 ENISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSIGRAIR 533
Query: 675 HRHDYGAIIFCDERFAHPSR-------KSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
H +DY A++ D R+AH S ++ WI+ + C +G+V L +FF+ R
Sbjct: 534 HANDYAAMLLVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACAQNYGEVHRLLHQFFKLNR 593
>gi|38455518|gb|AAR20858.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 167/623 (26%), Positives = 287/623 (46%), Gaps = 70/623 (11%)
Query: 124 VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADYMKNNPHLGD 180
++L SR+ +CIH EVS R G A + C L R + + + Y + G
Sbjct: 23 LVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQYFEGFSLEGK 82
Query: 181 E---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW- 233
E P+ I+DL GR+ CPYF+ R IV Y+YL+DP + + E
Sbjct: 83 ESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMS 142
Query: 234 KNSILIFDEAHNLEGICADAASFDLS--------------SGLLTACISEAKNCIDISST 279
+ S ++FDEAHN++ +C D+ S ++ + L+ E N ++
Sbjct: 143 RESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQ 202
Query: 280 RRGQS-SDETLNPDNFAILRALLLKLEKRIAEVPINSKE----LGFTKPG-PYIYELLAD 333
R Q D ++ D IL +L + VP N + L F + YI L
Sbjct: 203 RMVQGLKDASVQRDTDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRV 262
Query: 334 LNITQETAYKLIDIVEVAAELLQEDK---LQNKKSTTACRIESISNI-----LKII--FR 383
++ QE+ + ++++++ E K ++ ++ R IS++ L +I F
Sbjct: 263 HHVVQESPAGFLK--DISSKICIERKPLRFCAERLSSLLRTLEISDLTEYGALTLITHFA 320
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTS 442
+ ++ + + + D V ++ L + C + IAM FSR + ++++TS
Sbjct: 321 TLVSTYTKGFTIIIEPFDDKTPTV----SNPILHFSCLDSSIAMAPVFSRFQ--TVVITS 374
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
GTLSPMD + + L + + + + IV G ++S + R+ +
Sbjct: 375 GTLSPMDMYPKILDFDPVVMSSFTMTLARPCLLPMIVSKGNDQVTISSKFETREDTAVIR 434
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
G +V +A+ VPDG++ FF SY ++ +A W + I + + ++K +E
Sbjct: 435 NYGQLLVEVAKTVPDGIVCFFTSYLYLESVVASWYDQG------IVDTLLRYKLLFIETX 488
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
++ A+ +Y+ K D GAV AV RGKVSEG+DF H GRAV++ G+P+
Sbjct: 489 DNAETSYALMNYV-KACDCG-RGAVLLAVARGKVSEGVDFDHHYGRAVLMFGIPYVYTQS 546
Query: 623 PKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAI 682
++ + +YL Q Q + ++ L+F A R Q VGR +R + DYG +
Sbjct: 547 RILKARLDYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRALRGKTDYGIM 593
Query: 683 IFCDERFAHPSRKSQISLWIQPH 705
IF D+RF+ ++S++ WIQ H
Sbjct: 594 IFADKRFSRHDKRSRLPKWIQEH 616
>gi|440635897|gb|ELR05816.1| DNA repair helicase rad15 [Geomyces destructans 20631-21]
Length = 795
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 192/752 (25%), Positives = 322/752 (42%), Gaps = 113/752 (15%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FNIDDLPVLFPYPRIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQY 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK NYR
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMNYRT 94
Query: 122 KMVI---------LGSREQLCIHREVSLLRGSAQNNA-CR-----FLCKKGTN----RRC 162
+ + L SR+ LC+H V + A +A CR F+ K N C
Sbjct: 95 EQLGRVEEFRGLGLTSRKNLCLHPSVKREKSGAIVDARCRSLTAGFVKDKKENGEDVELC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + + ++ ++ G CPYF +R + +++ Y+YL+D
Sbjct: 155 TYHENL-DLLEPHDLIPNGVWTLDGIMRYGEEHKQCPYFTSRRMMPFCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNL-----EGICADAASFDLSSGLLTACISEAKNC-ID 275
P + + E K+ I++FDEAHN+ E + D L A E K C I
Sbjct: 214 PKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSTDITEDSLRKATRGAQNLETKICEIK 273
Query: 276 ISSTRRGQS-----------SDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPG 324
+ + Q+ +DE D F AL L K I E
Sbjct: 274 DTDAEKLQNEYAKLVEGLREADEAREEDTFMSNPALPDDLLKEAVPGNIRRAEHFVAFLK 333
Query: 325 PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTAC--RIESISNILKI-- 380
++ L + + Q + + + L+E +K C R+ S+ L++
Sbjct: 334 RFVEYLKTRMRVRQVISETPLSFLA----HLKETTFIERKPLRFCAERLTSLVRTLELTN 389
Query: 381 IFRDKGTAHSAYYRVHVREADANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSR 432
I + A + V + +L+ S T L + C + IA++ F R
Sbjct: 390 IEDYQPLQQVATFATLVATYEKGFLLILEPYESDTAEVPNPVLHFTCLDAAIAIKPVFDR 449
Query: 433 LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SKQIWAGIVPVGPSGYLLNS 490
S+I+TSGTLSP++ + + LNF V+ + +T + IV G ++S
Sbjct: 450 F--SSVIITSGTLSPLEMYPK--MLNFTTVVQETYQMTLARRSFLPMIVTRGSDQVAISS 505
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
++ R+ + GN + ++I PDG+++FFPSY M+ I+ W+ G L +W
Sbjct: 506 GFQVRNEPSVVRNYGNLLTEFSKITPDGMVVFFPSYLYMESIISMWQGM--GILDEVW-- 561
Query: 551 ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAV 610
K+K +VE + LA+E Y + GA+ V RGKVSEG+DF GR V
Sbjct: 562 --KYKLILVETPDAQETSLALETYRTAC--CNGRGAILLCVARGKVSEGIDFDHQYGRTV 617
Query: 611 VITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVG 670
+ G+PF ++ + E+L +ET + D+ + A R +Q +G
Sbjct: 618 LCIGVPFQYTESRILKARLEFL-----------RETYR--IRENDFLSFDAMRHASQCLG 664
Query: 671 RVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
RV+R + DYG ++ D RF +++Q+ WI
Sbjct: 665 RVLRGKDDYGIMVLADRRFM--KKRAQLPSWI 694
>gi|145353086|ref|XP_001420860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581095|gb|ABO99153.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 788
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 194/787 (24%), Positives = 330/787 (41%), Gaps = 154/787 (19%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ + G+ V FP+ + Y QL M + +SL + + +E PTGTGKT+ +L +++
Sbjct: 3 FNLEGLRVFFPYPQIYPEQLAMMTEFKRSLDARGHGAIEMPTGTGKTITVLSLCVSY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT------ 116
Q + ++Y +RT ++ +V+ E +T
Sbjct: 60 -------------------------QIAHPECGKLIYCTRTVPEMEKVLAECRTLERFIA 94
Query: 117 ---SNYRPKMVILG--SREQLCIHREVSLLRGSAQ--NNACRFLCKKGT-NRRCNHHSRV 168
M+ LG SR+ +C++ V + GS + + CR L +R +R
Sbjct: 95 ARAGEDVAAMLALGLSSRKNMCVNPRV-VDEGSRESVDGKCRRLTASWVREKRLEREARG 153
Query: 169 A---------------DYMKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQ 207
A ++ ++ G++ + + DL GRT CPYF+ R +
Sbjct: 154 ASENENVEDGGEGNCCEFFEDFESAGEKAVLPPGVYTLHDLRAFGRTKKWCPYFLARNMI 213
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
++V Y Y++DP + K I++FDEAHN++ +C +A LS L
Sbjct: 214 SFANVVVYNYQYMLDPKVASLVSSSLEKECIVVFDEAHNIDNVCIEA----LSVNLRQQT 269
Query: 267 ISEAKNCIDISSTR------------------------------RGQSSDETLNP---DN 293
+ A I +TR RG D +NP D+
Sbjct: 270 LENAGRSITSLNTRIDRAKQTDERRLRQEYERLVNGLAQQGVLARGGGEDVLMNPIIPDD 329
Query: 294 FAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAE 353
ILR + +R K F + Y+ L + QET + A
Sbjct: 330 --ILREAVPGNIRRAEHFVAVLKR--FVE---YLNMRLRSTQVEQETPTAFLQHCAANAG 382
Query: 354 LLQEDKLQNKKSTTAC--RIESISNILKIIFRDKGTAHS--AYYRVHVREADANAADVLK 409
+ + K+ C R+ S+ L+++ D+ A S A + V A +L+
Sbjct: 383 I-------DGKTLKFCYDRLTSLLKTLEVVDMDEFNALSLVANFAALVGTYSNGFALILE 435
Query: 410 GKASR-------TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
R L C + +A++ F R + S+ +TSGTLSP+D + + L N P+
Sbjct: 436 PYDERYPNIPDPVLQLACLDASLAIKPVFERFQ--SVFITSGTLSPIDLYPKLLGFN-PV 492
Query: 462 RVEN-PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
V + +T + ++ G +++ + RD Q G ++ +A+ VPDG++
Sbjct: 493 SVRSLAMTLTRDCLCPMVITRGADQQAVSTKFDMRDDPNVIQNYGRILIGLAQTVPDGIV 552
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD 580
FF SY M+ ++ W T I I +HK +E LA+++Y +
Sbjct: 553 AFFVSYSYMENIVSKWHETG------ILREIMQHKLVFIETTDVVETSLALDNY--RRAC 604
Query: 581 TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
GA+F +V RGKV+EG+DF H GRAVV+ G+P+ +R + EYL +
Sbjct: 605 NCGRGAIFLSVARGKVAEGIDFDRHYGRAVVMYGVPYQYTLSRILRARLEYL-----RET 659
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL 700
+ KE+ D+ A R Q VGRVIR + DYG ++F D+R+ ++ ++
Sbjct: 660 FQIKES--------DFLAFDAVRQAAQCVGRVIRSKKDYGLMVFADKRYNSQDKRGKLPG 711
Query: 701 WIQPHIQ 707
WI H++
Sbjct: 712 WITTHLR 718
>gi|145517083|ref|XP_001444430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411841|emb|CAK77033.1| unnamed protein product [Paramecium tetraurelia]
Length = 905
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 210/434 (48%), Gaps = 53/434 (12%)
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRL---EVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
+L +++ WC P +A FSRL + SI+LTSGTLSPM S+A EL++ F +++
Sbjct: 466 ILDQSNQLSINMWCLEPSLA---FSRLFSKSIYSILLTSGTLSPMPSWACELRIPFEVQL 522
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
N H+I + + S+ R++ E + G T++++++I+P+G+L+ F
Sbjct: 523 VNEHIIDLNKNLRVF-----QHKTFDFSFNQRNNEEQVSKFGVTLLSLSQIIPNGILVIF 577
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST 583
SY LM++ + W + R+C+ K + EP+QS+ + Y K S
Sbjct: 578 SSYSLMNKFRSKW------TYNKLLPRLCEIKACLWEPQQSAEMQNVFDLY----KQKSK 627
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ FAV RGKV+EG+DF+D RA+ + G+P+ D + K YLD +
Sbjct: 628 KGAIMFAVHRGKVAEGIDFSDELCRAIFLVGVPYPPKQDNHLLEKMGYLD----KIFNDP 683
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
+ T + +WY QQA RA NQA+GRVIRH +DYG + CD+RF + K +S W Q
Sbjct: 684 EFTNQQRIKSSEWYTQQAIRATNQAMGRVIRHINDYGIVYLCDKRFEYRDIKQGLSKWAQ 743
Query: 704 PHIQCYSKFGDVVYTLTRFFR-------------------EERICGSTNLKLIKTEVSGD 744
P IQ + +V+ F+ +E+ C L+ + D
Sbjct: 744 PAIQPWVNDDEVIKQTKEFYNRTISIKEQCIKEQIEQKPIQEQDCKKRKLQFFGLQNKND 803
Query: 745 VRELKPVDLLDKISLEEVPSSTPAVD----QACYSLHEVKNRNTSSHSGEIVPANRSSLS 800
+LK +L E ++ Q Y E +N+N++ +S + + +S
Sbjct: 804 FEKLKDETQERVKNLNEQQQQNEYINLQSYQMNYKPQEQQNKNSNKNSQK-----QLDIS 858
Query: 801 PYKGIWASELKNSS 814
++ I S L +S
Sbjct: 859 NFQNINLSNLDQNS 872
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 147/272 (54%), Gaps = 39/272 (14%)
Query: 11 VEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLG 70
V FP + YD Q YME VI++L K NALLESPTGTGKTL LLCA+LAW K
Sbjct: 57 VYFPHQPYDVQKSYMESVIRALNKKQNALLESPTGTGKTLSLLCASLAWLK--------- 107
Query: 71 SQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSRE 130
+ +NS Q + K I+Y+SRTH+QL+QV ELK + Y+P + +LGSR+
Sbjct: 108 -------KNRKDQLNSDQPKNIK---IIYSSRTHAQLKQVAMELKKTVYKPNVSMLGSRD 157
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLV- 189
Q CI + S ++G+ N +CR K + +C + + HL + L+
Sbjct: 158 QYCIRGDFSAIKGTLLNQSCR---KSVKSNQCQFYKK--------EHLILMAQNYSTLIS 206
Query: 190 --NIGRTFG----PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
+ + FG CPY+ R+ D++ PYNYL++ F+ + +E NSILIFDEA
Sbjct: 207 SLDEAKQFGFKNKLCPYYFERQRLDFADLILLPYNYLLEKDFQDVVEIE--NSILIFDEA 264
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCID 275
HN++ + +SF ++ + + + ID
Sbjct: 265 HNVQSTAEEGSSFLITHNNIIEAEKDLEKWID 296
>gi|194768579|ref|XP_001966389.1| GF22147 [Drosophila ananassae]
gi|190617153|gb|EDV32677.1| GF22147 [Drosophila ananassae]
Length = 875
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 182/708 (25%), Positives = 296/708 (41%), Gaps = 103/708 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQNN------ 148
I + SRTHSQL Q++ E+K + + + + +GSR+QLC + +V L+ A N
Sbjct: 191 IFFCSRTHSQLAQIMAEVKKTPHLSWVRCISMGSRQQLCCNSQVRALKSVAMMNERCLDM 250
Query: 149 -ACRFLCKKGTN----RRCNHHSRVADYMKNNPHLGD--------EPIDIEDLVNIGRTF 195
R L + + R S+ + HL + EP+DIE+L G +
Sbjct: 251 ITSRALPSQPSTSKKIRITGKESKPSRCPLKGQHLIESLRDLALSEPMDIEELAAEGTST 310
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
G C Y+ +R ++ PY L+D R+ LG+ K SI+I DEAHNL A
Sbjct: 311 GACAYYASRAALSEAHLILLPYQLLLDKSAREQLGINLKGSIVIVDEAHNLLDSVAQIHG 370
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
+++ + E N D R S+ L + + +LL+L + + I
Sbjct: 371 AEITRSDMEFAQLEMINYRDFYKNRF--SARNLLKINQLIFIARMLLQLHETMVPAQILD 428
Query: 316 KELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESIS 375
+K + +L L + + V+ + LQ Q++ A
Sbjct: 429 SCTLTSKADFFNLDLTGILTFCDKN--RFARKVQSYTQKLQSAPQQSENDPPAGPSVRSQ 486
Query: 376 NILKIIFRDKGTAHSAYYRVHVREADANAADVLK-------------------------G 410
+ K++ + R + E AN D K G
Sbjct: 487 MLQKLVQEQQEKEKPKAGRRRLEEVKANEPDKPKQGKRKLEEIATKELPKISPKKSLPSG 546
Query: 411 KASRTLSWWCF-----NPGIAMQEFSRLEVG---------------------SIILTSGT 444
K+S+ ++ F NP A + E G ++I+ GT
Sbjct: 547 KSSQVRNYLAFLETLLNPNDAGRILLDFENGIFKYFLIQPAEKFGYVVQLARAVIVAGGT 606
Query: 445 LSPMDSFAQELKLNFPLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
+ P + +L + R+ HV+ + +V GP+G L ++ R +
Sbjct: 607 MKPTEELKGQLFSCYQTRIVEHFYGHVVPDNAVLPFVVSHGPNGSALRFNFLQRSNPAML 666
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEP 561
QEL + N+ +++P G++ F PSY ++ H + ERI + KK E
Sbjct: 667 QELAMVLQNLVQVIPGGMVCFLPSYDYLEVVY------RHLEKSGTLERISQRKKIFRE- 719
Query: 562 RQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMT 621
+S +EDY + +KD S+ GA+ +V GK+SEGL+F D GRAV++ G+P+
Sbjct: 720 -ESGSADQLLEDYASAVKDKSSGGALLLSVVGGKLSEGLNFTDDLGRAVLVVGLPYPN-- 776
Query: 622 DPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
R+ L+LQ + Q + + L +GE++Y +AVNQ +GR IRH DY
Sbjct: 777 -------RKSLELQTRMQ---HLDQHLGSRAGEEFYENLCLKAVNQCIGRAIRHIGDYAC 826
Query: 682 IIFCDERFAHPSRKSQISLWIQPHIQCYSK----FGDVVYTLTRFFRE 725
+ DER+ +S++ WI HI SK FG V RFF+E
Sbjct: 827 VYLLDERYIWKKIQSKLPEWISKHIVEASKENGGFGAVQARTARFFKE 874
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+E Y+ Q M+++ Q L+N + ESPTGTGK+L L C L W
Sbjct: 20 FPYEPYEIQKKLMQELFQILENGEVGIFESPTGTGKSLTLTCGALTW 66
>gi|358399042|gb|EHK48385.1| hypothetical protein TRIATDRAFT_214371 [Trichoderma atroviride IMI
206040]
Length = 769
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 179/730 (24%), Positives = 318/730 (43%), Gaps = 122/730 (16%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + +LE P+GTGKT+ LL +A+++ + L
Sbjct: 6 KTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMPEKRKL-------------------- 45
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP---------KMVILGSREQLCIHREVS 139
+Y SRT S++ + + EL++ YR + + L SR+ LC+H V
Sbjct: 46 --------IYCSRTMSEIEKALVELQSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPSVK 97
Query: 140 LLR-GSAQNNACRFLC--------KKGTNRR-CNHHSRVADYMKNNPHLGDEPIDIEDLV 189
+ GS + CR L +G N C +H + D ++ + + + + L+
Sbjct: 98 REKSGSVVDARCRSLTAGFVKEKKDRGENVDVCVYHDNL-DLLEPHNLIPNGVWSFDALL 156
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEG 248
G CPYF R + + ++V Y+YL+DP + + ++ K+ I++FDEAHN++
Sbjct: 157 KYGEEHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVTKDFSKDCIVVFDEAHNIDN 216
Query: 249 ICADAASFDLSSGLLTACISEAKNC----IDISSTRRGQ-------------SSDETLNP 291
+C ++ S D++ + A++ ++ T + Q +DE+
Sbjct: 217 VCIESLSTDITEDSIRKATRSAQHLERRIAEMRETDQEQLQNEYEKLVQGLREADESRQE 276
Query: 292 DNFAILRALLLKLEKRIAEVPINSKE--LGFTKPG-PYIYELLADLNITQETAYKLIDIV 348
D F AL L K I E + F K Y+ + + ET +
Sbjct: 277 DAFMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFLEYLKTRMKVRQVISETPLSFL--- 333
Query: 349 EVAAELLQEDKLQNKKSTTAC--RIESISNILKII-------------FRDKGTAHSAYY 393
L+E +K C R+ S+ L+++ F + +
Sbjct: 334 ----AHLKEHTFIERKPLRFCAERLTSLVRTLELMNIEDYQALQEVATFATLVATYEKGF 389
Query: 394 RVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFA 452
+ + +++ A+V + TL + C + IA++ F R S+I+TSGT+SP++ +
Sbjct: 390 LLILEPYESDTAEV----PNPTLHFTCLDAAIAIRPVFERFY--SVIITSGTISPLEMYP 443
Query: 453 QELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIA 512
+ L ++ + + IV G ++SS++ R+ + GN + A
Sbjct: 444 KMLDFATVIQESYSMTLARRSFLPMIVTRGSDQASVSSSFQVRNEPSVVRNYGNLLTEFA 503
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIE 572
+I PDGL++FFPSY M+ I+ W+ G L +W K+K +VE + LA+E
Sbjct: 504 KITPDGLVVFFPSYLYMESIISMWQGM--GILDEVW----KYKLILVETPDAQETSLALE 557
Query: 573 DYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYL 632
Y + + GA+ V RGKVSEG+DF GR V+ G+PF ++ + E+L
Sbjct: 558 TY--RTACCNGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFL 615
Query: 633 DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHP 692
+ET + D+ + A R Q +GRV+R + DYG ++ D RF
Sbjct: 616 -----------RETYR--IKENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQ-- 660
Query: 693 SRKSQISLWI 702
+++Q+ WI
Sbjct: 661 KKRTQLPKWI 670
>gi|145525952|ref|XP_001448787.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416353|emb|CAK81390.1| unnamed protein product [Paramecium tetraurelia]
Length = 901
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 184/367 (50%), Gaps = 31/367 (8%)
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
VL ++ WC P +A + SI+LTSGTLSPM S++ EL++ F +++ N
Sbjct: 466 VLDQSNQLSIHMWCLEPSLAFSRLYNKSIHSILLTSGTLSPMPSWSCELRIPFDVQLANE 525
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
H+I + + Y + SY RD+ EY G T++++ + +P+G+L+ F SY
Sbjct: 526 HIID---LDKNLRIFQHKTY--DFSYNQRDNEEYICGFGVTLLSLCQTIPNGILVIFSSY 580
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGA 586
LM + + W + R+ + K + EP+QS+ + Y K+ S GA
Sbjct: 581 SLMFKFRSKWTQNK------LIPRLSELKVCLWEPQQSNQMQNVFDTY----KEKSKKGA 630
Query: 587 VFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET 646
+ FAV RGKV+EG+DF+D RA+ + G+P+ D + K YLD +++
Sbjct: 631 IMFAVHRGKVAEGIDFSDELCRAIFLVGVPYPPKKDNHLLEKMNYLDRIYNDLEFNHQQR 690
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ +WY QQA RA NQA+GRVIRH +DYG + CD+RF + +S W QP I
Sbjct: 691 ----IKSSEWYTQQAIRATNQAMGRVIRHINDYGIVYLCDKRFEQKEIRQGLSKWAQPAI 746
Query: 707 QCYSKFGDVVYTLTRFF-------REERICGSTNLKLIKTEVSGDVRELKPVDLLDKISL 759
Q + DV+ FF +ERI ++ EV R+L+ L +K
Sbjct: 747 QPWINDDDVIKQTKEFFNRTASNKEQERIEKKP---FLEQEVKK--RKLQFFGLQNKTEF 801
Query: 760 EEVPSST 766
E++ T
Sbjct: 802 EKLKEDT 808
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 147/277 (53%), Gaps = 39/277 (14%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I V FP + Y+ Q YME VIQ+L K NALLESPTGTGKTL LLCA+LAW K
Sbjct: 52 IDNTPVYFPHQPYEVQKAYMESVIQALNMKQNALLESPTGTGKTLSLLCASLAWLK---- 107
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVI 125
Q +S Q + K I+Y+SRTH+QL+QV ELK + Y+P + +
Sbjct: 108 ------------KNRQDQQSSDQPKNIK---IIYSSRTHAQLKQVAMELKKTIYKPNVSM 152
Query: 126 LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDI 185
LGSR+Q CI E S+L+G+ N +CR K +C + + HL
Sbjct: 153 LGSRDQYCIRGEFSMLKGTLLNQSCR---KSVKANQCQFYKK--------EHLIVMAQSY 201
Query: 186 EDLVNI---GRTFG----PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSIL 238
LV+ R FG CPY+ R+ + D++ PYNYL++ F+ + +E NSIL
Sbjct: 202 STLVSSLEEARQFGLKNKLCPYYFERQRLDSADLILLPYNYLLEKDFQDVVQIE--NSIL 259
Query: 239 IFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID 275
IFDEAHN++ D +SF ++ + + + ID
Sbjct: 260 IFDEAHNVQSTAEDGSSFFITLNNIVEAEKDLEKWID 296
>gi|403159247|ref|XP_003319882.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168014|gb|EFP75463.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 826
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 163/611 (26%), Positives = 282/611 (46%), Gaps = 96/611 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRGSAQ-----NNA 149
I +TSRTHSQL Q I E++ + ++ K+ + LGSR LCI+R V R AQ N A
Sbjct: 208 IYFTSRTHSQLNQFISEIRKTTFQDKVRVITLGSRANLCINRSV---RDKAQTLEAINEA 264
Query: 150 CRFLCKKGTNRRCNH------HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMT 203
C L K +++RC H R+ D+ H + DIE+L +GR CPY+ +
Sbjct: 265 CMDLQK--SDKRCPHLPSLDEQDRMNDFRD---HALAQIHDIEELAELGRVQNCCPYYGS 319
Query: 204 RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLL 263
R+ + IV PYN L+ R+ LG+ + +++I DEAHNL + LS+ L+
Sbjct: 320 RKAVRRAQIVTLPYNLLLQNSSREALGISLEKNVVIVDEAHNLIDSILGIRAVSLSNTLI 379
Query: 264 TACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTK- 322
+ ++ S + L N A L+ LL R+ + +N F+K
Sbjct: 380 SQIHKAFDTYVNKFSPK--------LKGTNLAHLKHLL-----RVFKCLLN-----FSKN 421
Query: 323 ------PGPYIYELLADLNITQETAYKL--IDIVEVAAELLQEDKLQNKKSTTACR---- 370
P +E N E + L ++++E+ + L E K+ NK + A +
Sbjct: 422 WSKNVPPNKVRHEETVTTNTLLENSGVLDQLNVLELE-KYLHESKIINKVAGYATKGADV 480
Query: 371 ---IESISNILKIIFRDKGTAHSAYYRVH-----VREADANAADVLKGKASR-------T 415
+S R + T +A+Y++ + AD + ++ + S T
Sbjct: 481 EKKNQSAQQADSNFSRSRSTLVTAFYKMQAFILAMSNADKDGRILMVSERSTASDQPTIT 540
Query: 416 LSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFP-------LRVENP 466
+ + + A FS + E S++L GT++P+D F +L FP L
Sbjct: 541 IKYQLLD---ASSSFSDIVSEARSVVLAGGTMAPLDDFHSQL---FPFVSPEKILDFSCS 594
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
H++ + + V GP G L + ++D + + +LG ++ NI I+ DG++ FFPSY
Sbjct: 595 HIVPPEHLLVRAVSKGPMGTNLQLKFSSKDDPKMQNDLGQSVANICNIIKDGVICFFPSY 654
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS---- 582
+D WK T +W R+ KK +EP+ ++ + Y A + ++
Sbjct: 655 ASLDTLTDRWKKTG------LWTRLENKKKIFIEPKSAADVDKILNGYSAAVNQSTNPTS 708
Query: 583 -TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD--LQAQSQ 639
+ G + AV GK+SEG++F+++ RAV++ G+P+ +++ + +Y++ AQ
Sbjct: 709 VSGGGLMLAVVGGKLSEGINFSNNLCRAVIVIGIPYPNSQSVELKERIKYVENLKGAQKD 768
Query: 640 GGEYKETKLSF 650
G+ L+F
Sbjct: 769 AGKNFYANLAF 779
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPFE Y+ Q +M + + ++++ + ESPTGTGK+L L+CA L W
Sbjct: 21 FPFEPYEIQRRFMRVLFEVIEHQKVGIFESPTGTGKSLSLICAALTW 67
>gi|432891078|ref|XP_004075537.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oryzias latipes]
Length = 665
Score = 186 bits (471), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 182/669 (27%), Positives = 301/669 (44%), Gaps = 102/669 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++K+
Sbjct: 5 IEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKAFP 64
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPK- 122
T ++Y SRT ++ +V++EL K + K
Sbjct: 65 LDVT---------------------------KLIYCSRTVPEIEKVVEELRKLMEFYAKE 97
Query: 123 --------MVILGSREQLCIHREVSLLR-GSAQNNACRFLCKK--GTNRRCNHHSRVADY 171
+ L SR+ LCIH EVS LR G + C L R N V +
Sbjct: 98 TGEVNNFLALALSSRKNLCIHPEVSSLRFGKEVDGKCHSLTASYIRAQRHSNPDQPVCRF 157
Query: 172 MKNNPHLGDE-PI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ +G + P+ +++DL + GR G CPY++ R +IV Y+YL+DP
Sbjct: 158 YEEFDAVGRQVPLPAGIYNLDDLKDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTA--CISEA---KNCIDISST 279
+ E K S+++FDEAHN++ +C D+ S +++ L C+ + + + I T
Sbjct: 218 ADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRRFCLIQTELKRKILKIKDT 277
Query: 280 RRGQSSDET------LNPDNFA-----ILRALLLKLEKRIAEVP--INSKE--LGFTKPG 324
+ +E L N A L +L E VP I + E LGF +
Sbjct: 278 DAAKLREEYRRLVEGLKEANVARETDVYLANPVLPDEILQEAVPGSIRTAEHFLGFLRRF 337
Query: 325 -PYIYELLADLNITQETAYKLI-DIVE----------VAAELLQE--DKLQNKKSTTACR 370
Y+ L ++ QE+A + + DI E AE LQ L+
Sbjct: 338 LEYLKSRLRVHHVVQESAPQFLKDIFEKVCIDRKPLRFCAERLQSLLRTLEIADIADFSA 397
Query: 371 IESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE- 429
+ ISN ++ + +S + + + D + A+ L + C +P IA++
Sbjct: 398 VTLISNFATLV-----STYSLGFTIIIEPFDDRTPTI----ANPVLHFSCMDPSIAIKPV 448
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
F R + S+++TSGTLSP+D + + L + + IV G L+
Sbjct: 449 FQRFQ--SVVITSGTLSPLDIYPKILDFRPVTMASFTMTLARTCLCPLIVGRGNDQVALS 506
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
S + R+ + GN ++ ++ IVPDG++ FF SY M+ +A W I E
Sbjct: 507 SKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYVYMENIVASWYEQG------ILE 560
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
I ++K +E + ++ +A+E Y ++ GA+ +V RGKVSEG+DF H GRA
Sbjct: 561 NIQRNKLIFIETQDAAETSMALEKYQEACENGR--GAILLSVARGKVSEGIDFVHHFGRA 618
Query: 610 VVITGMPFA 618
V++ G+P+
Sbjct: 619 VIMFGVPYV 627
>gi|241950739|ref|XP_002418092.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
gi|223641431|emb|CAX43392.1| ATP-dependent RNA helicase Chl1, putative [Candida dubliniensis
CD36]
Length = 823
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 180/641 (28%), Positives = 300/641 (46%), Gaps = 74/641 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRGSAQ- 146
I ++SRTHSQL Q +L+ +N+ R K + LGSR+QLCI+ +V +G+ Q
Sbjct: 204 IFFSSRTHSQLNQFSSQLRLTNFQASFEDLEERTKYIPLGSRKQLCINDKVRA-KGNDQS 262
Query: 147 -NNACRFLCKKGTNRRCNHHSRVADYMKNNP--HLGDEPI----DIEDLVNIGRTFGPCP 199
N+AC L ++ TN C + + +YM +N D + DIEDL +G CP
Sbjct: 263 VNDACIDL-QRETNG-CQYLPK--NYMMSNATKEFADLSLAKIRDIEDLNQLGTELNICP 318
Query: 200 YFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
Y+ R+ +I+ PY + RK L ++ K+SI+I DEAHN+ + S ++
Sbjct: 319 YYSVRKGIDMTEIISLPYQMIFQDTTRKILNLDIKDSIIIIDEAHNIIDVITSMYSIKVT 378
Query: 260 SGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK--RIAEVPINSKE 317
S L I K ++ R LN N R L+KL K +I +N+ +
Sbjct: 379 SDQLNKVIKSLKVYLNKFLKR--------LNSGN----RINLMKLIKICQILLKFLNNNQ 426
Query: 318 LGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNI 377
G K G I + D I +++ L++I ++ E L + K+ K + +IE
Sbjct: 427 -GSVKSGDEIQ--IQD--IFKDSTGDLVNIHKLD-EFLTKSKIAYKIESYIEKIE----- 475
Query: 378 LKIIFRDKGTAHSAYYRVHVREADANAADVLKGK-------ASRTLSWWCFNPGIAMQEF 430
L+ + + + + + N + +GK S +L++ +P +E
Sbjct: 476 LETGMKKSSSNPLLFTIIKFLKTLTNLSK--EGKFFWDNENGSISLNYMLLDPSAIFKEI 533
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP----HVITSKQIWAGIVPVGP-SG 485
+ ++L GT+ PM + L P N HVI + + + PV +
Sbjct: 534 VD-QAKCVLLCGGTMEPMADYMDYLFPTVPTNKINTFACGHVIPKENL--EVFPVSQWND 590
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
S++ R+ + LG ++ I + VP G++IFFPSY +DQ + WKNT
Sbjct: 591 TNFEFSFQKRNDPKQLTSLGEFLIEITKRVPYGVVIFFPSYKYLDQVLQFWKNTG----- 645
Query: 546 TIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
I I +K EP S + Y + T GA+ F+V GK+SEG++F+D
Sbjct: 646 -ILSSIESNKTIFREPTDPSNVEKVLSQY-GYIIQTERKGAMLFSVVGGKMSEGINFSDD 703
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
RAV++ G+P+ ++ KR++++ GG + + +++Y RAV
Sbjct: 704 LARAVIMVGLPYPNAYSGEMVTKRKFIETSVLKNGGTANDAR---EKSKNYYENLCMRAV 760
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
NQ++GR IRH +DY I D RF+ P ++++S W++ I
Sbjct: 761 NQSIGRSIRHVNDYSIIYLVDRRFSFPRIQNKLSQWVKERI 801
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAWRKSL---GSFSTL 69
P+ YD Q+ M+ + +++N L ESPTGTGKTL ++C+++ W ++ +F
Sbjct: 13 PYTPYDIQIQLMDAIYDTIENGYKIGLFESPTGTGKTLSIICSSMTWLRNFKRNNTFLET 72
Query: 70 GSQVNNQISG 79
G +V N G
Sbjct: 73 GPKVENGNEG 82
>gi|429329870|gb|AFZ81629.1| DNA repair helicase, putative [Babesia equi]
Length = 956
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 177/343 (51%), Gaps = 42/343 (12%)
Query: 414 RTLSWWCFNPGIAMQEFSRLE---VGSIILTSGTLSPMDSFAQEL---KLNFPLRVENPH 467
+ L++ C A+ F R++ V SIILTSGTL+P+ +++ KL F ++++N H
Sbjct: 516 KILNFECLQ---AVPTFLRIKDEGVRSIILTSGTLAPLYVLEKQIGGNKLPFEIKLQNRH 572
Query: 468 VITSKQIWAGIVPVGPSG-YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
VI ++WAGIV + L+S Y R + Y + LG ++++ + VP G+L+FF SY
Sbjct: 573 VIEPSRVWAGIVTGDKDDPHSLSSVYNTRATTPYVKALGESLLSFIKCVPSGVLVFFGSY 632
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD------ 580
M+Q ++ WK ++ ++ K +E R S L ++KL
Sbjct: 633 PAMNQTVSMWKQLG------LYSKMEMFKSIFIESRSSELNSAENYQELSKLDSSYGLTQ 686
Query: 581 ----------TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKRE 630
TS G++F +CRGK++EG+DF+D R V + G+P+ D LK +
Sbjct: 687 AQIMEYKSHITSGKGSIFIGICRGKIAEGIDFSDDYCRGVFVCGIPYPNRYDDNTALKMD 746
Query: 631 YLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA 690
YL + E + L++ DWY QA RA+NQA+GR IRH +DYGA++ D R+
Sbjct: 747 YLRRNGNCET-ESAKNDLAY----DWYTTQAIRAINQAIGRSIRHINDYGAVLLADYRYQ 801
Query: 691 HPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGSTN 733
K IS W+ ++ Y D +L RFF+ G+TN
Sbjct: 802 LSPIKQNISEWVANRLKIYQSIDDSTDSLKRFFK-----GATN 839
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 157/279 (56%), Gaps = 32/279 (11%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR----- 60
I G++V FP+ Y Q +YME VI++++N NALLESPTGTGKTL L+C++LA
Sbjct: 11 IEGVEVRFPYPPYQSQKLYMEAVIKAVKNGKNALLESPTGTGKTLSLICSSLACLLNNKF 70
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPT---------------ILYTSRTHS 105
+ G F+ NN +SS+ + S K P I+Y SRTH+
Sbjct: 71 NNKGGFNAPTDNANNNQYTLESSLLNKMSDLRKTPVSDQKKTKLRNRNRIHIVYASRTHT 130
Query: 106 QLRQVIQELKTSNYRP-------KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGT 158
QLRQV++E++ S Y K V+LGSR+QLCI+ RG++ A LCK
Sbjct: 131 QLRQVLKEVRKSLYTNEFNSKGIKAVLLGSRDQLCINPA----RGNSSGEALNALCKNLV 186
Query: 159 -NRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPY 217
NR+C +HS + N E +DIED+V++G++ CPY+ ++ ++ D+ PY
Sbjct: 187 QNRKCIYHSGLKMGKVNEDMSFYELLDIEDMVSLGKSKKCCPYYAVKDAHESADLTLLPY 246
Query: 218 NYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
NYL+ R+ + + + +ILI DEAHN+E I +AASF
Sbjct: 247 NYLLSTTIREAMELNLQGAILIIDEAHNIESIAENAASF 285
>gi|118387755|ref|XP_001026980.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89308750|gb|EAS06738.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1433
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 166/311 (53%), Gaps = 22/311 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT-SKQ 473
+++ WC +P +A Q SI+LTSGTL PM+S+ EL + F +++ H+I K
Sbjct: 527 SINLWCLDPSVAFQNILNEGPYSIMLTSGTLHPMNSWESELNIKFDVKLATSHIINIQKS 586
Query: 474 IWAGIVPVGPSGYLLNSSYRNR-DSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
+ G+V GP+ +N S+ NR + I+ +ELG ++ + IVP+G+L+ F S LM
Sbjct: 587 VVGGVVKNGPNKMEMNFSFNNRQNGIKIYEELGQFLIQLCNIVPNGILVCFSSGSLMQLA 646
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
W + I +R+ K EPR + ++ Y + GA+ F VC
Sbjct: 647 RDSWLESQ----LNIIQRLNAIKDVFFEPRSNVELSSTMKSY-CNAAERDDRGAIMFCVC 701
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGK+SEG+DF D R+VV+ G+PF D V K +YLD + Q E + +L L+
Sbjct: 702 RGKISEGIDFTDKLARSVVVVGVPFPPAADTWVVTKMDYLD---KKQSKENTDIELKTLN 758
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF 712
G++WY RA+NQA+GRVIRH+ DYG++ CD R W++P ++ YS F
Sbjct: 759 GKEWYFLCTVRALNQAIGRVIRHKDDYGSVYLCDNR------------WVRPALKNYSTF 806
Query: 713 GDVVYTLTRFF 723
++ FF
Sbjct: 807 EYLLNDCQNFF 817
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 133/259 (51%), Gaps = 44/259 (16%)
Query: 8 GIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFS 67
G+D+ FPF+ Y Q YM ++++L +K NALL+SPTGTGKTL LLCA L W
Sbjct: 50 GVDILFPFKPYQIQEDYMRSIVEALNSKSNALLQSPTGTGKTLSLLCACLGW-------- 101
Query: 68 TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQ---VIQELKTSNYRPKMV 124
L R Q++ V++ELK + Y+PK+
Sbjct: 102 ------------------------------LRQKRASQQIQSDGIVMKELKATAYKPKVC 131
Query: 125 ILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPID 184
I+GSREQ C+ +E S L+ N +C+ KK T C ++ D K P + DE +D
Sbjct: 132 IMGSREQYCLKKEYSNLKDLELNGSCKDAIKKKT---CQFYNYSGDGGKQQPKILDEVLD 188
Query: 185 IEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAH 244
IE+L GR CPY+ +RE++ D++ PY++L+ + V K+SI+IFDEAH
Sbjct: 189 IEELQERGRCKKFCPYYYSREIKDDADLIILPYSFLLKQSRFQEFQVILKDSIIIFDEAH 248
Query: 245 NLEGICADAASFDLSSGLL 263
N+ + S+ + L+
Sbjct: 249 NVPSAAEEGTSYKVDQNLI 267
>gi|340514003|gb|EGR44274.1| DNA excision repair helicase [Trichoderma reesei QM6a]
Length = 783
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 179/720 (24%), Positives = 317/720 (44%), Gaps = 102/720 (14%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + +LE P+GTGKT+ LL +A+++ + L
Sbjct: 20 ETLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMPEKRKL-------------------- 59
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREVS 139
+Y SRT S++ + + EL++ YR + + L SR+ LC+H V
Sbjct: 60 --------IYCSRTMSEIEKALVELQSLMKYRTEQLGYEEEFRGLGLTSRKNLCLHPSVK 111
Query: 140 LLR-GSAQNNACRFLC--------KKGTNRR-CNHHSRVADYMKNNPHLGDEPIDIEDLV 189
+ GS + CR L +G N C +H + D ++ + + + + L+
Sbjct: 112 REKSGSIVDARCRSLTAGFVKEKKDRGENVDVCVYHDNL-DLLEPHNLIPNGVWSFDALL 170
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEG 248
G CPYF R + + ++V Y+YL+DP + + ++ K+ I++FDEAHN++
Sbjct: 171 RYGEEHKQCPYFTARRMMEYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNIDN 230
Query: 249 ICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKR- 307
+C +A S D++ + A++ ++ ++ E L + +++ L E R
Sbjct: 231 VCIEALSTDITEDSIRKATRSAQH-LERRIAEMRETDQEQLQNEYEKLVQGLRAADESRQ 289
Query: 308 ----IAEVPINSKELGFTKPGPY--IYELLADLNITQETAYKLIDIVEVAAEL------- 354
+A + L PG +A L E + + +V +E
Sbjct: 290 EDAFMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFLEYLKTRMKVRQVISETPPSFLAH 349
Query: 355 LQEDKLQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAADVLKG 410
L+E KK C R+ S+ L++ I + A + V + +L+
Sbjct: 350 LKEHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQALQEVATFATLVATYEKGFLLILEP 409
Query: 411 KASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR 462
S T L + C + IA++ F R S+I+TSGT+SP++ + + L ++
Sbjct: 410 YESDTAEVPNPTLHFTCLDAAIAIRPVFERFY--SVIITSGTISPLEMYPKMLDFATVIQ 467
Query: 463 VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
+ K IV G ++SS++ R+ + G+ + A+I PDG+++F
Sbjct: 468 ESYSMTLARKSFLPMIVTRGSDQASISSSFQVRNEPSVVRNYGSLLTEFAKITPDGMVVF 527
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS 582
FPSY M+ I+ W+ G L +W K+K +VE + LA+E Y + +
Sbjct: 528 FPSYLYMESIISMWQGM--GILDEVW----KYKLILVETPDAQETSLALETY--RTACCN 579
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGE 642
GA+ V RGKVSEG+DF GR V+ G+PF ++ + E+L
Sbjct: 580 GRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFL---------- 629
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+ET + D+ + A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 630 -RETYR--IKENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRNQLPKWI 684
>gi|353235657|emb|CCA67667.1| related to CHL1-protein of the DEAH box family [Piriformospora
indica DSM 11827]
Length = 769
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 156/576 (27%), Positives = 262/576 (45%), Gaps = 69/576 (11%)
Query: 97 ILYTSRTHSQLRQVIQELK-------TSNYRP--KMVILGSREQLCIHREVSLLRGSAQN 147
I YTSRTHSQL Q+ E + +N RP ++V LGSR+ LCI+ E+ +G +
Sbjct: 196 IFYTSRTHSQLSQLQVEFEKLKHLPSQANDRPIARVVPLGSRKNLCINEELRA-KGGDLD 254
Query: 148 NACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE----PIDIEDLVNIGRTFGPCPYFMT 203
CR L ++ +RC + D + L D+ P DIEDL +G+ CPY+ +
Sbjct: 255 EGCRELIQEKGKKRCPYLPPAGD-ISAMADLRDQILATPRDIEDLAQLGKELKTCPYYGS 313
Query: 204 RELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLL 263
R+ K ++V PYN L+ R+ LGV+ + +I DEAHNL + L +L
Sbjct: 314 RKAIKQAELVTLPYNLLLQKQARETLGVDLTDQTVIIDEAHNLIDTILSIHTVSLPHSVL 373
Query: 264 TACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL---LLKLEK---RIAEVPINSKE 317
+ + + + Q + L P + LR L L+ ++K +A ++
Sbjct: 374 KKSLEQLRIYL--------QRFRKMLTPQHALHLRRLVEFLVAVDKYCNDLATQFTGAET 425
Query: 318 LGFTKPGPYIY---ELLADLNITQETAYKLIDIVEVAAELLQ-EDKLQNKKSTTACRI-- 371
PG I E + +N+ + Y + ++A ++ DKL K++ A +
Sbjct: 426 ENMMTPGEMIAVLGEKVQGINLLEIEKY--LRTSKIARKVSGYSDKLAAKEAQAAGKTFH 483
Query: 372 ----ESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAM 427
+ + I + V + A++ DV TL + NP
Sbjct: 484 QGTTPPLHLVQSWIVTLSNANEDGKLVITVSRSKASSPDV-------TLKYQLLNPSRVF 536
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN-------PHVITSKQIWAGIVP 480
++ S++L GT++PM F +L P E+ HV+ + + +V
Sbjct: 537 RDIVD-SARSVVLAGGTMAPMSDFHSQL---VPYLSEDRISLFSCGHVMPEENLKTVVVS 592
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
GP+G L ++ + ELG + N+ IVPDG+++FFPSY ++ A W
Sbjct: 593 RGPTGKGLVYKHQQQKDPAVMDELGQILANLVNIVPDGMVVFFPSYNFLNALRARW---- 648
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK----DTSTSGAVFFAVCRGKV 596
GN T ER+ KK EP++ +++Y ++ + +GA+ AV K+
Sbjct: 649 GGNGT--LERLKNKKKLFFEPQEGGSVDAVLQEYTDAIRLKKPEDKQTGALLLAVVGAKL 706
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYL 632
SEGL+F+D RAVV+ G+PFA T +++ + ++
Sbjct: 707 SEGLNFSDELSRAVVVVGLPFANATSIELKERMRFV 742
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 13 FPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW------RKSLGS 65
FP++ Y+ QL M + +++ K A++ESPTGTGKTL LL +L W R G
Sbjct: 15 FPYDKPYNIQLDLMRHLFAAIEGKQVAVVESPTGTGKTLSLLSGSLTWLQDEKSRAVKGQ 74
Query: 66 FSTL 69
F+ L
Sbjct: 75 FAQL 78
>gi|399217948|emb|CCF74835.1| unnamed protein product [Babesia microti strain RI]
Length = 843
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 195/799 (24%), Positives = 331/799 (41%), Gaps = 191/799 (23%)
Query: 21 QLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGS 80
Q+ + K+ +L +ALLESPTGTGKT ++ A +W K + S G +V
Sbjct: 101 QIQIIAKLTSALTTGGHALLESPTGTGKTAAIVAAVGSWLKH--NLSRPGPRVQ------ 152
Query: 81 QSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLC------- 133
+ Y +RTHSQ+RQV+ E++ +R + LGSR C
Sbjct: 153 ----------------VFYLTRTHSQIRQVLGEVRRCCFRLDVACLGSRAVACPMVKRGS 196
Query: 134 -IHREVSLLRGS-----AQNNACRFL-------CKKGTNRRCNHHS-RVADYMKNNP--- 176
I S + + N CR+ + RC S R+AD ++
Sbjct: 197 DIKSADSFCQSARAGEEGDPNGCRYYRGLESKDFASMIHFRCRTLSHRIADPLRKGDVTA 256
Query: 177 --HLGDEPIDIEDLVNI------------------------------GRTFGPCPYFMTR 204
L D DIE+LV++ G G CPY+ +
Sbjct: 257 RYELKDGLWDIEELVDLCTENNAAVSNEPVPSRNKKQKSIISYFVREGPHVG-CPYYTAK 315
Query: 205 ELQKTVDIVFAPYNYLID----------------------------------PWFRKGLG 230
L DIV PY+Y+ID P G G
Sbjct: 316 SLSALADIVICPYSYVIDVTLPATDETIVERALATPKTELQQKLLDRALAFLPDRSIGAG 375
Query: 231 VE--WKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDET 288
N++++ DEAHN+E C + S D+S L A S + D+ R S+ +
Sbjct: 376 ARLPMGNNVIVIDEAHNIESFCKERGSLDVSVVQLRAAGSWLR---DLCPNR---SNKDK 429
Query: 289 LNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIV 348
+ + ++ L + ++ N + + G ++ T + + D +
Sbjct: 430 MANKSLEAVQDHALHVYGFVSNFAANVRRISAAATGSFV---------TWDRYDHVEDKL 480
Query: 349 EVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVR-EADANAADV 407
AA+ L++ ++ + A ++N+ I T S + +R EA
Sbjct: 481 GGAAQFLKDFEITFLDAFLA-----LANMYYIT--SFATLLSVLSPLSIRLEAGTEGTPR 533
Query: 408 LKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV---- 463
LK W G+ + SR + S++LTSGTL+P++ + L +F R+
Sbjct: 534 LK--------LWLQRAGVVLDPISR-KAKSLLLTSGTLAPLNVTSASLGESFVKRLGKCT 584
Query: 464 -ENPHVITSKQIWA---GIVPV-GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
E HVI+ +Q +P+ G G +L +RN + ++ LG + +++ ++P
Sbjct: 585 LEAGHVISKEQFALFTLSTMPLRGGGGVVLECVHRNLKNNDFLASLGTVVASLSALLPGN 644
Query: 519 LLIFFPSYYLMDQCIACWKNTSHG---NLTTIWERICKHKKPV-VEPRQSSLFPLAIEDY 574
+LIFFPS L+ +CI WK++ H + +TI +R+ + K+ + +EP+ S L +D
Sbjct: 645 ILIFFPSRDLVRRCIELWKHSQHSCGRDGSTILDRLARAKEELFIEPKTS----LEFQDI 700
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
+ +++ + + A RG SEGL+ +++V+ G+PFA DP V
Sbjct: 701 VLRMEQVRS--FILLATFRGHASEGLNLGV---QSLVLIGLPFANRVDPAVD-------- 747
Query: 635 QAQSQGGEYKETKLSFLSG-EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ ++G DWY A RA+NQ++GR IR + D G ++ D R H +
Sbjct: 748 ---------ASIRFGAVAGVGDWYLIDAYRAINQSIGRCIRKKSDRGIVLLLDSR--HST 796
Query: 694 RKSQISLWIQPHIQCYSKF 712
+S W++PH+ +F
Sbjct: 797 YCGNLSAWLRPHLSHVDEF 815
>gi|366997252|ref|XP_003678388.1| hypothetical protein NCAS_0J00700 [Naumovozyma castellii CBS 4309]
gi|342304260|emb|CCC72049.1| hypothetical protein NCAS_0J00700 [Naumovozyma castellii CBS 4309]
Length = 832
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 173/668 (25%), Positives = 292/668 (43%), Gaps = 91/668 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTS------------NYRPKMVILGSREQLCIHREVSLLRGS 144
I + SRTHSQL Q +L+ N + K + LGS++ LCI+ V + +
Sbjct: 213 IYFASRTHSQLNQFASQLRLPSFPSSFSKENDINEKIKYIPLGSKKILCINPNVKKWKTT 272
Query: 145 -AQNNACRFLCKKGTNRRCNHHSRVADYMKNNP--HLGDEPI-----------DIEDLVN 190
A N+AC H Y +N P H ++ + DIED V
Sbjct: 273 EAINDACY---------EVRHSKEGCPYYQNTPEWHTANDTLAFRDNTFAQIHDIEDTVT 323
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
G T G CP++ R+ +++ PY YL+ R+ L +E KNSI+I DEAHNL
Sbjct: 324 AGETLGVCPFYAIRDSIPGAEVITLPYQYLLSETMRESLNLELKNSIIIIDEAHNLIDTI 383
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAE 310
S +++ L CI+ + + +R LNP N R LLKL K +
Sbjct: 384 NSIYSSEVALNDLIYCINGLQVYLSKFKSR--------LNPGN----RVNLLKLIKLLNV 431
Query: 311 VPINSKELGFTKPGPYI--YELLADLNITQETAYKLIDIVEVAAELLQEDK-LQNKKSTT 367
+ KE F KPG I ++L D N+ +KLI V+V+ + D +Q+ +
Sbjct: 432 IAKFIKE-NFKKPGQEIDPNDMLNDSNVDMLNIHKLIKYVKVSKVAYKIDTYMQSLQPVE 490
Query: 368 ACRIESISNILKIIFRDKGTAHSAYYRVH---VREADANAADVLKGKASRTLSWWCFNPG 424
+ E ++ ++ +R+ ++ + + + + P
Sbjct: 491 EHQSEK---------KNSSSSQPLLFRIMSFLTSLSNPKSEGQFFFEKGSKVKYMLMEPS 541
Query: 425 IAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS 484
Q + +IL GT+ P+ F L FP ++ ITS I +
Sbjct: 542 KQFQSILS-DSKCVILAGGTMEPIQDFYDNL---FPSVPKDQ--ITSFSCDHVIPDSNLN 595
Query: 485 GYLLNS-----SYRNRDSIEY-KQELGNTIVNIARIVPD--GLLIFFPSYYLMDQCIACW 536
++LN ++ R+ + + L + ++ VP G+++FFPSY +D I W
Sbjct: 596 TFILNEPIWEFTFEKRNDTQLINKYLFQFFIKLSTSVPSKGGIVVFFPSYQYLDHVITQW 655
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKV 596
K+ I K V+P + DY + GA+ FA+ GK+
Sbjct: 656 KSNGLFEKLNAIRSIFYESKDGVDP---------LSDYSETI--AKNQGAILFAIVGGKL 704
Query: 597 SEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDW 656
SEG++F D RA+V+TG+P+ + ++ +K+++L+ + GG ++ ++ ++
Sbjct: 705 SEGINFQDDLCRAIVMTGLPYPNVFSGELLVKKKHLEEKILKNGGTKQDVN---IATRNF 761
Query: 657 YNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVV 716
+ +AVNQ+VGR IRH +DY I D+R+A + K ++S W+ IQ + V+
Sbjct: 762 FETICMKAVNQSVGRAIRHANDYANIYLLDKRYATQNIKGKLSHWVANRIQPQTTVDSVM 821
Query: 717 YTLTRFFR 724
FF+
Sbjct: 822 LETRTFFK 829
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSL-QNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFST 68
D P++ YD QL M+ + L +NK A+LESPTGTGKTL L+C+T+ W + +
Sbjct: 10 DFHHPYKPYDIQLQLMQCIYDVLSENKKIAILESPTGTGKTLSLICSTITWLRENKTNYL 69
Query: 69 LGSQVNNQISGSQSSVNSSQSGDSK 93
G IS + + N S++ D +
Sbjct: 70 AG------ISNEKENNNQSENDDDE 88
>gi|345562800|gb|EGX45813.1| hypothetical protein AOL_s00117g18 [Arthrobotrys oligospora ATCC
24927]
Length = 749
Score = 182 bits (463), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 175/707 (24%), Positives = 301/707 (42%), Gaps = 102/707 (14%)
Query: 43 PTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
P+GTGKT+ LL +A+++ L +Y SR
Sbjct: 2 PSGTGKTVSLLSLIVAYQQHYPEHRKL----------------------------IYCSR 33
Query: 103 THSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREVSL-LRGSAQNNACR 151
T S++ + + ELK YR K + L SR+ LC+H V +G+ + CR
Sbjct: 34 TMSEIEKALYELKALMEYRAKELGQVEDFRGLGLTSRKNLCLHPSVKREKKGTVVDARCR 93
Query: 152 FLC---------KKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFM 202
L K C +H + D ++ + + ++ ++ G CPYF
Sbjct: 94 SLTAGFVKEKKEKGEEVESCIYHDNL-DLLEPHNLIPPGVYTLDGMLKYGEDQKQCPYFT 152
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSG 261
R + +++ Y+YL+DP + + E K+ I++FDEAHN++ +C ++ S D++
Sbjct: 153 ARRMMPYCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDITED 212
Query: 262 LLT----ACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE 317
L C S K D+ ST + E + A + E P+ +
Sbjct: 213 SLRKAARGCTSLEKKIEDMKSTDADKLQQEYAKLVE-GLQDASTAREEDSFMANPVLPDD 271
Query: 318 L------GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTT 367
L G + + L +T K++ ++ E LQ K KK
Sbjct: 272 LLKEAVPGNIRRAEHFVAFLKRFVEYLKTRMKVLHVISETPPSFLQHLKDLTFIEKKPLR 331
Query: 368 AC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAADVLKGKASRT-------L 416
C R+ S+ L++ + + A + V + +L+ S T
Sbjct: 332 FCAERLTSLIRTLELSNVEEFQALQEVATFATLVATYEKGFLLILEPFESETATVPNPIF 391
Query: 417 SWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
+ C + IA++ F R S+++TSGT+SP++ + + L+ + ++ + +
Sbjct: 392 HFTCLDASIAIKPVFDRF--WSVVITSGTISPLEMYPKMLQFDCVVQESYAMTLARRSFL 449
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
+V G ++S + R+ + GN ++ ++I PDGL+IFFPSY M+ I+
Sbjct: 450 PMVVTRGSDQVAISSRFEIRNDPSVVRNYGNLMIEFSKITPDGLVIFFPSYLYMESIISM 509
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGK 595
W+ G L +W K+K +VE S LA+E Y + + GAV V RGK
Sbjct: 510 WQGM--GILDEVW----KYKLILVETPDSQETSLALETY--RTACCNGRGAVLLCVARGK 561
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGED 655
VSEG+DF GR V+ G+PF ++ + E+L + KE D
Sbjct: 562 VSEGIDFDHQYGRTVICIGVPFQYTESRILKARLEFL-----RENFRIKEN--------D 608
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+ + A R Q +GRV+R + DYG ++ D+RF +++Q+ WI
Sbjct: 609 FLSFDAMRHAAQCLGRVLRGKDDYGIMVLADKRFG--KKRNQLPKWI 653
>gi|449300032|gb|EMC96045.1| hypothetical protein BAUCODRAFT_514453 [Baudoinia compniacensis
UAMH 10762]
Length = 831
Score = 182 bits (462), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 176/684 (25%), Positives = 287/684 (41%), Gaps = 108/684 (15%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNYRPKM------------------VILGSREQLCIH- 135
P I + SRTHSQL Q ++EL+ P M V LGSR+ LCI+
Sbjct: 195 PKIYFCSRTHSQLSQFVRELRRVQLPPSMPPGAEAKLDEHVHEAVKQVPLGSRKNLCINP 254
Query: 136 REVSLLRGSAQNNACRFL--CKKGTNRRC------NHHSRVADYMKNNPHLGDEPIDIED 187
+ + L +A N C L K RC ++ V D+ H DIED
Sbjct: 255 KVIKLGDQTAINERCVELQQTKTPAEHRCPYLPSKDNEDLVLDF---RDHALARIRDIED 311
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
L +G G CPY+ +R ++V PY L+ R LG+ + +++ DEAHNL
Sbjct: 312 LAEVGARLGICPYYASRTAIGAAELVTLPYPLLLQKSARDALGISLRGQVVVIDEAHNL- 370
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTR---RGQSSDETLNPDNFAILRALLLKL 304
A A S+ + + +K+ + I R R + ++ +L +LL
Sbjct: 371 ---ASAVEGIYSAKISDMLVERSKSSMLIYLQRFRNRLKGANRVYVTQVVRVLDSLL-SF 426
Query: 305 EKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEV----------AAEL 354
+ P S + ++ LLA + Q KLI + V A+ L
Sbjct: 427 FASLLNAPRTSGTVEASR-------LLAGKGVDQVNISKLIHFLTVSKLARKVEGYASHL 479
Query: 355 -LQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKAS 413
+++D NK +E+ ++ + T A+ V +
Sbjct: 480 TIKQDSADNKSP-----VENTADTPAL------THVQAFLATLVNPSSDGRFSWSIETGR 528
Query: 414 RTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNFP--LRVENPHVI 469
R L + +P + F + E ++IL GT+SPMD + + L P H+I
Sbjct: 529 RELQYMLLDPA---EHFRGIVDETRAVILAGGTMSPMDDYQERLFPYLPSLTTFSCGHLI 585
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ + G + SY++R+ + +G+ ++ +A V GL++F PSY +
Sbjct: 586 PPSNLLVRTIATDAKG-TIELSYKSRNDATAVR-IGDALLKVATYVQGGLVVFLPSYGFL 643
Query: 530 DQCIACWKNTSH-GNLTTI----WERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS 584
Q CW S L I W+ + V + +++ TS
Sbjct: 644 QQLYDCWHAHSMIARLEQIKAVFWDSRTMSAEAVFKAYTEAIY-------------TSAK 690
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
GA+ +V GK+SEG++F+D GR VV+ G+PF + P+ + + +YLD +A +G
Sbjct: 691 GAILLSVLGGKLSEGINFSDDLGRCVVVVGLPFPNLETPEWKARMQYLDEKAVGRG---- 746
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQP 704
+L + + RAVNQAVGRVIRH+ D+ +I+ D R+ + ++ WI+
Sbjct: 747 --ELKGKASREHAENVCMRAVNQAVGRVIRHKDDWASIVLMDSRYLQSRIRQKLPGWIK- 803
Query: 705 HIQCY-----SKFGDVVYTLTRFF 723
C+ SK VV + FF
Sbjct: 804 --DCFPADSASKVDGVVGDVAAFF 825
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D PF+ YD Q +ME + +++ + ESPTGTGK+L L+CA+L W
Sbjct: 5 DFHHPFQPYDIQQQFMEAMYDCIEDGKVGIFESPTGTGKSLSLICASLTW 54
>gi|407929782|gb|EKG22592.1| Helicase-like DEXD box c2 type [Macrophomina phaseolina MS6]
Length = 816
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 191/704 (27%), Positives = 311/704 (44%), Gaps = 107/704 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--------------------------KMVILGSRE 130
+ Y SRTHSQL Q EL+ P K + LGSR+
Sbjct: 139 VFYCSRTHSQLSQFAGELRRVKMPPAISSSDGQQMRSGQQDDAHTEITENFKHLTLGSRK 198
Query: 131 QLCIHREVSLLRGSAQ--NNACRFLCKKGT--NRRCNH-HSRVADYMKNN--PHLGDEPI 183
LCI+ +V L GSA N C L K GT +R+C + ++ + + N+ H +
Sbjct: 199 NLCINPKVQKL-GSAPLVNEKCLDLQKPGTAADRKCPYLPTKETEPIVNDFRDHALADIR 257
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIEDL IG+ G CPY+ +R K +IV PY L+ R+ L + K ++I DEA
Sbjct: 258 DIEDLGKIGKKLGVCPYYASRAAVKPSEIVTLPYPLLLQKTAREALDINMKGHVVIIDEA 317
Query: 244 HNL----EGICADAASFD---LSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
HNL GI + + S S G LT + +N + +G+ N A
Sbjct: 318 HNLMDAITGIYSVSVSLSQLLRSRGQLTTYLQRFRNRL------KGK------NRVYLAQ 365
Query: 297 LRALLLKLEKRIAEVPINS-KELGFTKPGPYIYELLADLNITQETAYKLIDIVE------ 349
L+ L + + + N+ +E G + G +L+A + Q YKL+ ++
Sbjct: 366 TVRLVDSLIRYLQSIDSNTGEEEGIVQIG----DLMAGKGVDQINLYKLLRYLDESRLAR 421
Query: 350 -VAAELLQ-EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYY-----RVHVREADA 402
V +L E++ + K+ST+A E S + ++ S +Y V R A
Sbjct: 422 KVDGYVLHTEEQEKIKQSTSAMSGEPRSTMPVLMH-----IQSFFYALLNPSVEGRFFYA 476
Query: 403 NAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP-- 460
+ L L + +P ++ + ++IL GT+SPM +++ L P
Sbjct: 477 KNDEEL----GLCLKYMLLDPTHHFRDIVE-DARAVILAGGTMSPMSDYSEHLLSYLPPS 531
Query: 461 --LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
+ V HVI + A V GPSG + ++ R++ +LG+ +++ +PDG
Sbjct: 532 RIVTVSCGHVIPPSNLLAWPVTTGPSGAPFDFTFEKRNTEATILDLGSALLSFISSIPDG 591
Query: 519 LLIFFPSYYLMDQCIACWK---NTSHGNLTTIWE--RICK-------------HKKPVVE 560
+++FFPSY +D+C+ W+ + T+++ R+ K K
Sbjct: 592 VVVFFPSYAYLDRCMEAWQRLPSPRASGAKTLYDALRLVKPIFHESKNKATRMEKTKTAP 651
Query: 561 PRQSSLFPLAI-EDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
P Q ++ ++ Y + + GA+ AV G +SEG++F+D GR VV+ G+PF
Sbjct: 652 PEQINVTTDSVLSAYSTAVATGNGRGALLLAVIGGSLSEGINFSDGLGRGVVVVGLPFPN 711
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+ + K Y+ +A +GG K + ++Y RAVNQ VGR IRHR+DY
Sbjct: 712 PHSAEWKAKLAYISRKAVEKGGSGDAGK---AAAREFYENACMRAVNQCVGRAIRHRNDY 768
Query: 680 GAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+I+ D R+ K + WI+ ++ V L FF
Sbjct: 769 ASILLVDRRYESDRIKVKFPGWIRGSLRKGDGIQVVKRGLVEFF 812
>gi|406859189|gb|EKD12258.1| tfiih complex helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 786
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 174/721 (24%), Positives = 317/721 (43%), Gaps = 107/721 (14%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + +LE P+GTGKT+ LL +A+++ L
Sbjct: 6 RTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQYYPEHRKL-------------------- 45
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREVS 139
+Y SRT S++ + + EL+ YR +M+ L SR+ LC+H V
Sbjct: 46 --------IYCSRTMSEIEKALFELEALMKYRAEMLGHEEEFRGLGLTSRKNLCLHPSVK 97
Query: 140 LLR-GSAQNNACRFLCKKGTNRR---------CNHHSRVADYMKNNPHLGDEPIDIEDLV 189
+ G+ + CR L + C +H + D ++ + + + E ++
Sbjct: 98 REKSGTVVDARCRSLTAGFVKEKKERGEDVPVCIYHDNL-DLLEPHDLIPNGVWTFEGIL 156
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEG 248
G CPYF +R + +++ Y+YL+DP + + E K+ I++FDEAHN++
Sbjct: 157 KYGEEHKQCPYFTSRRMMSFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDN 216
Query: 249 ICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI 308
+C ++ S D++ L A+N ++I T S + L + ++ L + R
Sbjct: 217 VCIESLSTDITEDSLRKATRGAQN-LEIKITDMKNSDADKLKSEYAKLVEGLRDADDARQ 275
Query: 309 AEVPINSKELGFTKPGPYIYELL------ADLNITQETAY--KLIDIVEVAAEL------ 354
+ +++ L P + E + A+ IT E+ + + +V +E
Sbjct: 276 EDAFMSNPAL----PDDLLKEAVPGNIRRAEHFITSESDLLQTRMKVRQVISETPPSFLA 331
Query: 355 -LQEDKLQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAADVLK 409
L+E KK C R+ S+ L++ I + A + V + +L+
Sbjct: 332 HLKEYTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFVLILE 391
Query: 410 GKASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
S T L + C + IA++ F R S+I+TSGT+SP++ + + L +
Sbjct: 392 PYESDTAEVPNPVLHFACLDAAIAIKPVFDRF--SSVIITSGTISPLEMYPKMLGFTAVV 449
Query: 462 RVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
+ + + IV G ++S ++ R+ + G+ + +++ PDG+++
Sbjct: 450 QESYTMTLARRSFLPMIVTRGSDQVAISSGFQVRNEPSVVRNYGHLLTEFSKLTPDGMVV 509
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT 581
FFPSY M+ I+ W+ G L +W K+K +VE + LA++ Y +
Sbjct: 510 FFPSYLYMESIISMWQGM--GILDEVW----KNKLILVETPDAQETSLALDTYRTACNN- 562
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
GA+ V RGKVSEG+DF + GR V+ G+PF ++ + E+L
Sbjct: 563 -GRGAILLCVARGKVSEGIDFDNQYGRTVLCIGVPFQYTESRILKARLEFL--------- 612
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
+ET + D+ + A R Q +GRV+R + DYG ++ D RF +++Q+ W
Sbjct: 613 --RETYR--IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFL--KKRNQLPKW 666
Query: 702 I 702
I
Sbjct: 667 I 667
>gi|401423118|ref|XP_003876046.1| putative DNA excision repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492286|emb|CBZ27561.1| putative DNA excision repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 813
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 184/762 (24%), Positives = 335/762 (43%), Gaps = 116/762 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ + V FP+E Y QL Y+ ++ + L + +LE P+GTGKT+ LL +A+
Sbjct: 5 VEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQ--ELKTSNYRP- 121
+++ + V +++ + + +T ++R++++ E + RP
Sbjct: 60 --------LHHHAYEKRKVVYCTRTVEEMV-------KTMGEMRKLLKHWEAEGEQLRPL 104
Query: 122 KMVILGSREQLCIHREV-SLLRGSAQNNACRFLCKKGTNR-RCNHHSRVADYMKNNP-HL 178
+ + L +++ LCI V SL+ + CR + RC ++ D + P L
Sbjct: 105 RGLCLTAKKNLCIETSVASLIHPDEVDAGCRSITAPWQQEGRCGYY----DTLVQAPLEL 160
Query: 179 GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW--KNS 236
++DL + G CPY++ R+ VDI+ Y Y++DP + + E+ +N+
Sbjct: 161 PPGVYSLDDLKDFGEQHHVCPYYLVRKALPVVDIIVHSYLYMVDPVVSE-VTKEFLNENT 219
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDIS-------STRRGQSSDETL 289
I++ DE HN++ +C +A S L+ + +N D+S +T R Q DE
Sbjct: 220 IVVMDEGHNVDDVCIEAMSLILTK---KDSLDAKQNMKDLSKELDHLKATNRQQLQDEYD 276
Query: 290 NPDNFAILRALLLKLEKR----IAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLI 345
N + + LE+R +P N E LA + + ++++
Sbjct: 277 RLVNGLAMAEMARDLEQRALVETPAIPANVAEGAIPASLRQANHFLAFMQRLVDFTHRIV 336
Query: 346 DIVE---VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR-------- 394
+ VA L KL+ + + +S LK++ ++ YR
Sbjct: 337 ARITRTYVADPLTFLTKLKEECALEISHFRYLSERLKVLLTTLQVTNAGKYRPVALIAQM 396
Query: 395 ------------------VHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEV 435
V V EA + RT+ C + +A+++ FSR
Sbjct: 397 YTLLSMYYTDDRYEKPGFVVVCEAFDPTRPQIPDPVIRTV---CVDASLALRDTFSRYR- 452
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP-----VGPSGYLLNS 490
S+ILTSGTLSPMD + + L + ++ K I IV V + + S
Sbjct: 453 -SVILTSGTLSPMDIYPKILGFTPAISKSFQMTLSRKCIAPVIVTRSSESVSITAEEVTS 511
Query: 491 SYRNRDSIEYKQELGNT----IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
S++ R + + + + ++ +A+ VPDG++ FF Y M + + W ++
Sbjct: 512 SFKVRTNPTAQALVTSAYESLLLELAKTVPDGMVCFFTGYQYMGEVLLTWHSSG------ 565
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+++ KHK VE + +A+ +Y + D GA+F ++ RGK++EG+DF H
Sbjct: 566 FLQKLAKHKLIFVETQGVEETSVALANY-RRACDIG-RGAIFMSIARGKIAEGIDFDRHY 623
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GRAVV+ G+PF D +R + ++++ E++ N A R +
Sbjct: 624 GRAVVMFGVPFLPPNDEPLRQRMHWMEVCLGISESEFR-------------NFDAMRQAS 670
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
Q +GRV+R++ DYG ++ D+RFA + +I WI +QC
Sbjct: 671 QCIGRVLRNKTDYGMMLLVDKRFALNDKIKKIPRWI---VQC 709
>gi|444313385|ref|XP_004177350.1| hypothetical protein TBLA_0A00310 [Tetrapisispora blattae CBS 6284]
gi|387510389|emb|CCH57831.1| hypothetical protein TBLA_0A00310 [Tetrapisispora blattae CBS 6284]
Length = 893
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 175/693 (25%), Positives = 316/693 (45%), Gaps = 89/693 (12%)
Query: 74 NNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR------------- 120
NNQ+S S + +N + I +TSRTHSQL Q +L N +
Sbjct: 251 NNQLSQSTNFINPIK--------IYFTSRTHSQLNQFASQLDLINSKFKSSFEKFDITKE 302
Query: 121 -PKMVILGSREQLCIHREVSLLRGSAQ--NNACRFLCKKGTNRRCNHHSR---VADYMKN 174
K + L SR+QLCI+ +++ + + N AC L + C ++ V +
Sbjct: 303 KIKYLPLASRKQLCINSKITSKYNTVESINEACIDLI--NSKEGCPYYENYKLVQNQSNF 360
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
HL DIED+ +G++ CPY+ ++ + +I+ PY YL+ R L ++ K
Sbjct: 361 TNHLFTSIHDIEDMFQLGKSLKTCPYYTSKTSIENSEIITLPYQYLLSQSTRLSLNIDLK 420
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDN- 293
+SI+I DEAHNL D + SS +L + + + K ++ S ++ + LNP N
Sbjct: 421 DSIVIIDEAHNL----IDTINSIYSSKILLSDLIKIKTGLN-SYLKKFKLK---LNPGNR 472
Query: 294 FAILRALLLK--LEKRIAEVPINSKELGFTKPGPYIYELLAD-LNITQETAYKLIDIVEV 350
+L+ L L L + I P +SK + P + AD LNI + Y I I ++
Sbjct: 473 INLLKILKLANILIEFILYYPKDSKNIKI-DPMDFFEGSNADILNIHKLQKY--IKISKI 529
Query: 351 AAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKG 410
+ ++ E +QN + + S S ++F+ S +N
Sbjct: 530 SYKI--EAFIQNSNANNSNIANSPSTTSPVLFKLSKFLSSL-------SNPSNEGQFFID 580
Query: 411 KASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL----RVENP 466
++++ P Q + IIL GT+ P++ F L +N P
Sbjct: 581 LKENSINYMLLEPFHPFQSIIN-DAKCIILAGGTMEPINDFVDNLLINIPKGQISTFACN 639
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY-KQELGNTIVNIARIVPD--GLLIFF 523
H+I + I+ + + + ++ R ++ EL N + ++ P G++ FF
Sbjct: 640 HIIPDDYLTTFII----NNPIFDFTFAKRSNLNLINNELFNFFIKLSNQTPKNGGIVAFF 695
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST 583
P+Y + I W+ + I+++I K+ +P+ + P ++DY+ ++++S
Sbjct: 696 PNYDYLKLIIDNWQKIN------IFDKIDKNIRPIFFETKDG--PDILQDYITSVENSSK 747
Query: 584 -----SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
+ F++ GK+SEG++F D+ RAVV+ G+P+ + ++ +K+ +L +
Sbjct: 748 IASKLGAGILFSIVGGKLSEGINFQDNLCRAVVMVGLPYPNIFSNEMLIKKNHLKDKILK 807
Query: 639 QGGEYKE----TKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
GG + TKL +Y +AVNQ+VGR IRH+ D+ I D R+A +
Sbjct: 808 NGGTINQVNEKTKL-------FYENICMKAVNQSVGRAIRHKDDFANIYLLDRRYATDAI 860
Query: 695 KSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
K ++S W++ + SK +V++ FF+++R
Sbjct: 861 KLKLSNWVRKRVIISSKIDEVMHQTNLFFKKKR 893
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 14 PFEAYDCQLVYMEKVIQSL-QNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
PF YD QL M + SL K ++ESPTGTGKTL L+C+TL + + +
Sbjct: 29 PFHPYDIQLQLMTFLYDSLFLEKKVLIVESPTGTGKTLSLICSTLTYLRDI 79
>gi|169612700|ref|XP_001799767.1| hypothetical protein SNOG_09475 [Phaeosphaeria nodorum SN15]
gi|160702563|gb|EAT82740.2| hypothetical protein SNOG_09475 [Phaeosphaeria nodorum SN15]
Length = 724
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 164/653 (25%), Positives = 287/653 (43%), Gaps = 74/653 (11%)
Query: 105 SQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFL 153
S++ + + ELK YR K + L SR+ LC+H V + G+ ++ CR L
Sbjct: 2 SEIEKALAELKNLMKYRTKELGYEEEFRGLGLTSRKNLCLHPTVKREKSGTVVDSKCRSL 61
Query: 154 CKKGTNRR---------CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTR 204
+ C +H + D ++ + + + L+ G CPYF R
Sbjct: 62 TAGFVKEKKERGEDVDLCVYHDNL-DLLEPHNLVPPGVFTFDGLLKYGEKHKQCPYFSAR 120
Query: 205 ELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
+ +++ Y+YL+DP + E K+ I++FDEAHN++ +C ++ S D++ L
Sbjct: 121 RMMAYCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDITEDSL 180
Query: 264 TACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL----- 318
++ N +D T + E L + ++ L E R + + + L
Sbjct: 181 RKA-TKGVNNLDRKITEMKTTDAEKLQSEYAKLVEGLRTADEARQEDTFMANPALPDDLL 239
Query: 319 -----GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC 369
G + + L +T K++ ++ E LQ + KK C
Sbjct: 240 TEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHVISETPPSFLQHLRDLTFIEKKPLRFC 299
Query: 370 --RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAADVLKGKASRT-------LSW 418
R+ S+ L++ I + A + V + +L+ S T L +
Sbjct: 300 AERLTSLVRTLELTNIEDYQPLQDIATFATLVATYETGFLLILEPFESATATVPNPVLHF 359
Query: 419 WCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAG 477
C + IA++ F R S+I+TSGT+SP+D + + L N ++ +T K
Sbjct: 360 TCLDAAIAIKPVFERFY--SVIVTSGTMSPLDMYPRMLNFNTVVQESFTMTLTRKTFLPM 417
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
IV G + S + +R+ ++ ++ G ++ ++ PDG+++FFPSY M+ I+ W+
Sbjct: 418 IVDRGNDQNQITSQFEHRNDLQVQRNFGTLLIEFCKLTPDGVVVFFPSYLYMESIISAWQ 477
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
L T+W K+K +VE + LA+E + + GAV V RGKVS
Sbjct: 478 GME--ILDTVW----KYKLILVETPDAQETALALETFRTACNN--GRGAVLLCVARGKVS 529
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EG+DF H GR V+ G+P+ ++ + E+L Y+ + FLS +
Sbjct: 530 EGIDFDHHYGRTVLCMGVPYQYTESRILKARLEFL-------RETYRIKESDFLSFD--- 579
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS 710
A R Q +GRVIR + DYG ++ D+RF + +Q+ WIQ ++ S
Sbjct: 580 ---AMRHAAQCLGRVIRGKDDYGIMVLADKRFN--KKVTQLPKWIQQGLEAKS 627
>gi|410907467|ref|XP_003967213.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Takifugu rubripes]
Length = 979
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 171/324 (52%), Gaps = 26/324 (8%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
++ + NP + + + E ++++ GT+ P+ F QEL + + E HV
Sbjct: 667 SVKFLLLNPAVHFAQILK-ECRAVVIAGGTMQPVSDFKQELLFSAGVGEERIVEFSCGHV 725
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I + I ++ GPSG L+ +++NRDS E G + NI +VP G++ FFPSY
Sbjct: 726 IPPENILPLVLCNGPSGQELDFTFQNRDSPHMMDETGRILSNICNVVPGGVVCFFPSYEY 785
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST----- 583
+ + + W+ ++G L R+ KK EP++S+L ++D+ ++ +
Sbjct: 786 LRRITSHWE--TNGTLA----RLANKKKIFHEPKKSNLVEQVLKDFSRCIQRCAADSGAL 839
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ F+V GK+SEG++F+D GR VV+ GMP+ + P+++ K YLD GG+
Sbjct: 840 TGALLFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMSYLDKHLPHNGGKS 899
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRHR DY +++ CD R++ P+ +++ WI+
Sbjct: 900 --------PGQALIENLCMKAVNQSIGRAIRHRGDYSSMVLCDRRYSRPATLAKLPAWIR 951
Query: 704 PHIQCYSKFGDVVYTLTRFFREER 727
++ FG TL +FF E +
Sbjct: 952 DRTSTHTSFGPAFATLRKFFHERK 975
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 26/189 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + +V LGSR+ LCI+ EV L GS Q N+ C
Sbjct: 298 IYYCSRTHSQLAQFVHEVQKSPFANDISLVTLGSRQNLCINEEVRRL-GSIQHINDRCME 356
Query: 153 LCKKGTNRRCNHHSRVADYMKNNP--------------HLGDEPI----DIEDLVNIGRT 194
+ K N+ H K P + DE + DIE L+ +G
Sbjct: 357 MQK---NKHEKQHQEDGAKRKRGPAKSTCPYNKAPALQRMRDEILGAVQDIEQLLKLGSE 413
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ R +V PY L+ R+ GV+ K ++I DEAHNL +
Sbjct: 414 TRSCPYYSARLTIPPAQLVVLPYQMLLHEATRRAAGVQLKGQVVIIDEAHNLSDTLSCIY 473
Query: 255 SFDLSSGLL 263
S +L+ L
Sbjct: 474 SAELTGAQL 482
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ YD Q +M+ + +L + ESPTGTGK+L L+C L+W
Sbjct: 99 FPYQPYDIQQQFMQALYSALDQGKVGIFESPTGTGKSLSLICGALSW 145
>gi|346976950|gb|EGY20402.1| DNA repair helicase RAD3 [Verticillium dahliae VdLs.17]
Length = 772
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 173/713 (24%), Positives = 308/713 (43%), Gaps = 106/713 (14%)
Query: 20 CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISG 79
CQ Y + +++L + +LE P+GTGKT+ LL +A+++ L
Sbjct: 40 CQ--YADTALETLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHYPEHRKL---------- 87
Query: 80 SQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVILGSREQLCIHREV 138
+Y SRT S++ + + EL+ YR + LG E L
Sbjct: 88 ------------------IYCSRTMSEIEKALAELRELMKYRTEQ--LGQEEDLTA---- 123
Query: 139 SLLRGSAQNNACRFLCKKGTNRR-CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGP 197
G + KG N C +H + D ++ + + + + L+ G
Sbjct: 124 ----GFVKEKK-----DKGENVDVCVYHDNL-DLLEPHNLIPNGVWTFDGLLRYGEQHKQ 173
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASF 256
CPYF +R + + +++ Y+YL+DP + + E K+ I++FDEAHN++ +C ++ S
Sbjct: 174 CPYFTSRRMMQYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLST 233
Query: 257 DLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSK 316
D++ L A+N +D Q+ E L + ++ L E R + + +
Sbjct: 234 DITEDSLRKAARGAQN-LDRKIAEMKQTDQEQLQNEYLKLVEGLRDAGEARQEDAFMANP 292
Query: 317 E--LGFTKPG---------PYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKS 365
+ L PG ++ + L + + + L+E KK
Sbjct: 293 DDLLNEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVRNTISETPPSFLAHLKEFTFIEKKP 352
Query: 366 TTAC--RIESISNILKII-------------FRDKGTAHSAYYRVHVREADANAADVLKG 410
C R+ S+ L++ F + + + + ++ AA+V
Sbjct: 353 LKFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESEAAEV--- 409
Query: 411 KASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI 469
+ L + C + IA++ F R S+I+TSGT+SP++ + + L + ++ +
Sbjct: 410 -PNPVLHFTCLDAAIAIKPVFDRF--SSVIITSGTISPLEMYPKMLGFSTVVQESYSMTL 466
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ IV G +++S++ R+ + G+ + A+I PDG+++FFPSY M
Sbjct: 467 ARRSFLPMIVTRGSDQASVSTSFQVRNEPSVVRNYGSLLTEFAKITPDGMVVFFPSYLYM 526
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFF 589
+ I+ W+ G L +W K+K +VE + LA+E Y + + GAV
Sbjct: 527 ESIISMWQGM--GILDEVW----KYKLILVETPDAQETSLALETY--RTACCNGRGAVLL 578
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
V RGKVSEG+DF GRAV+ G+PF ++ + E+L Y+ +
Sbjct: 579 CVARGKVSEGIDFDHQYGRAVLNIGVPFQYTESRILKARLEFL-------RETYRIREND 631
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
FLS + A R Q +GRV+R + DYG ++ D RF ++ Q+ WI
Sbjct: 632 FLSFD------AMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRVQLPKWI 676
>gi|170585544|ref|XP_001897542.1| DEAD_2 family protein [Brugia malayi]
gi|158594849|gb|EDP33426.1| DEAD_2 family protein [Brugia malayi]
Length = 794
Score = 179 bits (454), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 214/455 (47%), Gaps = 55/455 (12%)
Query: 89 SGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSREQLCIHREVSLLRGS-AQ 146
S S P ILY SRTHSQL QVI+EL + Y+ K V L SR+ LCI+ +V S +
Sbjct: 8 SSRSLYPKILYASRTHSQLVQVIRELNKTTYKDIKTVTLASRDXLCINDKVMKENNSHVK 67
Query: 147 NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-------DIEDLVNIGRTFGPCP 199
+ CR L +K RC ++ Y K +P D DIE+++++ R CP
Sbjct: 68 SLMCRNLIRK---HRCPFYNF---YEKADPSTLDLLYSKNGLVPDIEEVISVSRKHKYCP 121
Query: 200 YFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
YF +R + + D++ PYNY++DP R ++ K +I+IFDEAHNLE +C ++ S S
Sbjct: 122 YFRSRSMYENADLILLPYNYIVDPSLRYKHNIQLKGNIVIFDEAHNLESVCEESTSVSFS 181
Query: 260 SGLLTACISEAKNCIDIS------------------STRRGQSSDETLNPDNFAILRALL 301
+ ++ACI E K +++ T ++++ + ++ A L A L
Sbjct: 182 TTQISACIRETKKVLELMINDEEEVRTQMDNTVVPIGTEIQETNEVKIEKNDVAYLLASL 241
Query: 302 LKLEKRIAEVPINSKEL-----GFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
+ E + + + G PG ++ ELL+ ++ + ++ + L
Sbjct: 242 HQFEDAVDVCAKSGGKKVTGIDGKVYPGEHMIELLSKAGFRKDMREAVSQTIDKIGQYLT 301
Query: 357 EDKLQNKK----STTACRIESISNILKIIFRDKGTAHSAY-------YRVHVREADANAA 405
K QN+ ++ S+ + I+ K + ++H + D +
Sbjct: 302 A-KAQNETIGEFVEKGVYLQEFSSFISTIYAYKHASSQVLDSPACVVRKLHKKITDDSIV 360
Query: 406 D-----VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP 460
+ K + TL++WCF+P +AM V S+I+TSGTLSP+DSF L ++FP
Sbjct: 361 KYFQLYITKHSSVITLNYWCFSPSVAMWYLHSCGVRSVIVTSGTLSPLDSFINNLGISFP 420
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNR 495
+ +EN H QI + SG L ++ R
Sbjct: 421 IALENQHAANVDQILCARIRSSQSGIDLCGTFHKR 455
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 19/174 (10%)
Query: 567 FPLAIEDYMAKLKD--------TSTSG----AVFFAVCRGKVSEGLDFADHAGRAVVITG 614
FP+A+E+ A D +S SG F C VSEG+DF D R V++ G
Sbjct: 419 FPIALENQHAANVDQILCARIRSSQSGIDLCGTFHKRC---VSEGIDFLDSESRGVIVIG 475
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+A DP++ LKR++L Q K+ +S ++WY +A R+VNQ++GRV+R
Sbjct: 476 IPYAPTMDPRIELKRQFLTKQRMVV---VKQELRKNISADEWYQVEAIRSVNQSIGRVLR 532
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERI 728
H++D+G +I D RF S K S W++ ++ Y D +FF++ I
Sbjct: 533 HKNDFGVVILADSRFCSMSSKWFPS-WMRGCLKNYQDISDFEDECKQFFKKRNI 585
>gi|344233991|gb|EGV65861.1| hypothetical protein CANTEDRAFT_101726 [Candida tenuis ATCC 10573]
Length = 807
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 167/659 (25%), Positives = 300/659 (45%), Gaps = 77/659 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRGSAQ- 146
I ++SRTH+QL Q +L + + R K + +GSR+QLCIH ++S L +
Sbjct: 185 IFFSSRTHTQLGQFSGQLALTTFESSLYDMSERVKYLPMGSRKQLCIHPKISKLSNTESI 244
Query: 147 NNACRFLCKKGTNRR--CNHH-----SRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCP 199
N AC L KK + CN + DY H DI++L +G CP
Sbjct: 245 NEACGELAKKESKCEFVCNTKVEGIKQQFNDYSLTKIH------DIQELKQLGEYLKICP 298
Query: 200 YFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
Y+ R K +++ PY L++ R L + KNSI+I DEAHNL D
Sbjct: 299 YYSVRNNLKMTEVISLPYQMLLEENARDSLNINIKNSIIIVDEAHNL---------LDTI 349
Query: 260 SGLLTACIS-EAKNCIDISSTRRGQSSDETLNPDN-FAILRALLLKLEKRIAEVPINSKE 317
+ L +A IS E ++ S + LNP N I++ L+K+ + + + +++
Sbjct: 350 NALNSAAISAEELTSLNQSLKLYFNKFIKRLNPGNRINIMK--LIKICSILHKFIVYNRD 407
Query: 318 LGFTKPGPYIY--ELLAD-----LNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR 370
K G I ++ D NI + Y + E E ++N ++T+
Sbjct: 408 NKLAKTGGKIKINDIFIDNTGDLFNIHKLNEYLKTSKIAFKIETYLEKNVENYQTTSNPL 467
Query: 371 IESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEF 430
+ + L+ + T +++ D+ + D L ++ + +P +
Sbjct: 468 LFKLVTFLRAL--SNPTNEGSFF------WDSTSPDDL------SIKYLLLDPSEIFKPI 513
Query: 431 SRLEVGSIILTSGTLSPMDSFAQELKLNFPL----RVENPHVITSKQIWAGIVPVGP-SG 485
+ +IL GT+ PM + + L P + H+I + + ++P+G
Sbjct: 514 VE-DCKCLILAGGTMEPMSDYTEYLFPYLPTTQIKQFSCDHIIPIENL--KVLPIGSYKN 570
Query: 486 YLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT 545
+L+ S++NR++ LG ++ I + PDG ++F PSY ++ +A WK
Sbjct: 571 QILDFSFKNRNNSTLILRLGECLIEIMKNTPDGTVVFLPSYKYLNHIVAEWKQMG----- 625
Query: 546 TIWERICKHKKPV-VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
IW+++ K + VEP SS ++ Y +K + GAV F+V GK+SEG++F+D
Sbjct: 626 -IWKQMEALKSSLFVEPSSSSQVDEVLKKYSRAIK--TGKGAVLFSVVGGKLSEGINFSD 682
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
RAV++ G+P+ + ++ ++++++ + G ++ + + R+
Sbjct: 683 ELARAVIMVGLPYPNLMSGELIARKKFIEETTFLKTG---SKSMALDNSRQFIENICMRS 739
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+NQ++GR IRH +DY I D R+ S ++++S WI+ I F +V+ FF
Sbjct: 740 INQSIGRSIRHINDYSMIYLFDHRYHQKSVQNKLSGWIKRRILDQLPFPEVIQHTNDFF 798
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 7 RGID-VEFPFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAWRKSLG 64
RG D P+E YD QL M ++ +++ L ESPTGTGKTL L+CAT++W
Sbjct: 3 RGDDKFHHPYEPYDIQLQLMGEIYEAIDKGFKVGLFESPTGTGKTLSLICATMSW----- 57
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQS 89
L N ++ S S + S+S
Sbjct: 58 ----LRKHKNTNLTTSHSGDSESES 78
>gi|167527059|ref|XP_001747862.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773611|gb|EDQ87249.1| predicted protein [Monosiga brevicollis MX1]
Length = 812
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/565 (24%), Positives = 257/565 (45%), Gaps = 63/565 (11%)
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
+P+D+E+L + C Y+ R+ ++V PYN L+ R G++ N+++I
Sbjct: 284 QPLDVEELAAMASREKACAYYAARKAVAPAELVVVPYNMLLHKSTRLASGLQLTNNVVII 343
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
DEAHNL A+ S ++ +L + ++ ++ + + L N ++ L
Sbjct: 344 DEAHNLMDTIANIHSVTVTGDIL---LGAHRDLLEYCQRYKAR-----LKAKNLMYVKQL 395
Query: 301 LLKLEKRIAEVP--------INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVE--- 349
L L++ + V +S+ L +P + E L +KL+ E
Sbjct: 396 LFTLKRWLMAVKKADGLESQTDSERL---QP---VNEFLFATETDHVNLFKLLTFCERSE 449
Query: 350 VAAELLQEDKLQNKKSTTACRIESISN------ILKIIFRDKGTAHSAYYRVHVREADAN 403
++ +LL + + +++ C E+ S +++ +F+ ++ RV V++A +
Sbjct: 450 ISRKLLGFAERRARQAGQVCGSETGSKHLSPLRVVETLFQALSNSNRDG-RVLVKQAHS- 507
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
G + + NP + +E + ++I+ GT+SP+ F ++L V
Sbjct: 508 ------GLKQSFIRFLLLNPAVYFEEILQ-SARAVIVAGGTMSPVTDFVEQLTTQATKSV 560
Query: 464 EN-----PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
HV+ S + ++ + L ++ R S +ELG +++ +A VP G
Sbjct: 561 AVHHFACGHVVPSSHLCPIVLTQTSNRQPLRLTFSTRQSEAMMRELGESLIRVAATVPAG 620
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
L++FFPSY + + W T G + + +HK EPR + ++ Y +
Sbjct: 621 LVVFFPSYEYEQKLVEFW--TRQG----VLRKFERHKPIFREPRAGKDVDVVLQQYATAI 674
Query: 579 KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
+ GA F+V GK+SEG++F D GR VV+ GMP+ + +++ K +L Q S
Sbjct: 675 Q---KGGAALFSVVGGKLSEGINFKDDLGRCVVMVGMPYPNLHSKELQEKMAFLRSQPAS 731
Query: 639 QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
S G+++Y +AVNQ++GR IRHR D+ A+I DER+A P ++++
Sbjct: 732 G---------SVDKGQEYYENLCLKAVNQSIGRAIRHRGDFAAVIMLDERYATPRVRNKL 782
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFF 723
W+ +++ + L FF
Sbjct: 783 PGWMMSNLKVTPTVAQLEDHLKEFF 807
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
+D FPFE Y Q +M ++ ++++ + ESPTGTGK+L LLC L W
Sbjct: 24 VDFAFPFEPYSIQRDFMHRLYETIEQGGLGIFESPTGTGKSLSLLCGALRW 74
>gi|195441757|ref|XP_002068655.1| GK23572 [Drosophila willistoni]
gi|194164740|gb|EDW79641.1| GK23572 [Drosophila willistoni]
Length = 196
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 125/201 (62%), Gaps = 21/201 (10%)
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAV 587
++++C+ W+ + +W I K +EPR F +E++ ++D+ GA
Sbjct: 1 MLNKCVDAWQTSG------LWADIAAKKPIFLEPRGKDQFTTTMEEFYQAIRDSK--GAC 52
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
F AVCRGKVSEGLDFAD GRAV+I G+P+ + DPKV LKR YL+ KE +
Sbjct: 53 FMAVCRGKVSEGLDFADRNGRAVIIAGLPYPPLKDPKVILKRRYLE------ANRTKENQ 106
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI- 706
L L+G++WYN A+RAVN A+GRVIRHRHDYGAI+ CD RF S+ Q+S WI+ H+
Sbjct: 107 L--LTGQEWYNLDATRAVNHAIGRVIRHRHDYGAILLCDSRFQDNSQVQQLSKWIRGHLG 164
Query: 707 ---QCYSKFGDVVYTLTRFFR 724
QC S FG +V L +FFR
Sbjct: 165 ARPQC-SPFGPIVRELRQFFR 184
>gi|12835975|dbj|BAB23443.1| unnamed protein product [Mus musculus]
Length = 593
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 151/559 (27%), Positives = 260/559 (46%), Gaps = 69/559 (12%)
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDE 242
+++DL +G+ G CPYF+ R ++V Y+YL+DP + E + ++++FDE
Sbjct: 9 NLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDE 68
Query: 243 AHNLEGICADAASFDLSSGLLTACISE----AKNCIDISSTRRGQSSDE----------- 287
AHN++ +C D+ S +L+ L C S K + I T + DE
Sbjct: 69 AHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDECRRLVEGLREA 128
Query: 288 TLNPDNFAILRALLLKLEKRIAEVP--INSKE--LGFTKPG-PYIYELLADLNITQETAY 342
++ + A L +L E VP I + E LGF + Y+ L ++ QE+
Sbjct: 129 SVARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPP 188
Query: 343 KLIDIVEVAAELLQEDKLQNKK-STTACRIESISNILKI----------IFRDKGTAHSA 391
+ + L Q +Q K A R+ S+ + L+I + + T S
Sbjct: 189 AFL------SGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVST 242
Query: 392 Y---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSP 447
Y + + + D + A+ L + C + +A++ F R + S+I+TSGTLSP
Sbjct: 243 YAKGFTIIIEPFDDRTPTI----ANPVLHFSCMDASLAIKPVFERFQ--SVIITSGTLSP 296
Query: 448 MDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNT 507
+D + + L + + + I+ G ++S + R+ I + GN
Sbjct: 297 LDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNL 356
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLF 567
++ ++ +VPDG++ FF SY M+ +A W I E I ++K +E + +
Sbjct: 357 LLEMSAVVPDGIVAFFTSYQYMESTVASWYEQG------ILENIQRNKLLFIETQDGAET 410
Query: 568 PLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRL 627
+A+E Y ++ GA+ +V RGKVSEG+DF H GRAV++ G+P+ ++
Sbjct: 411 SVALEKYQEACENGR--GAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKA 468
Query: 628 KREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDE 687
+ EYL Q Q + ++ L+F A R Q VGR IR + DYG ++F D+
Sbjct: 469 RLEYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAIRGKTDYGLMVFADK 515
Query: 688 RFAHPSRKSQISLWIQPHI 706
RFA ++ ++ WIQ H+
Sbjct: 516 RFARADKRGKLPRWIQEHL 534
>gi|428170235|gb|EKX39162.1| ERCC2/XPD/Rad3 nucleotide excision repair [Guillardia theta
CCMP2712]
Length = 703
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 161/621 (25%), Positives = 289/621 (46%), Gaps = 78/621 (12%)
Query: 82 SSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP--------KMVILG--SRE 130
S + S Q ++P ++Y +RT ++ + ++EL+ YR K++ LG SR
Sbjct: 31 SLITSYQLAHPEVPKLVYCTRTVPEMEKALEELRELIKYRTSILGAEGGKILALGLSSRR 90
Query: 131 QLCIHREVSLLRGSAQNNA-CRFLCKKGTNRR--CNHHSRVADYMKNNPHLGDEPI---- 183
+CIH E+S +A CR + +R +++ V + + G + +
Sbjct: 91 NMCIHPEISQESDRIAVDAQCRSITASWVRQRKEQDNNINVCSFFEGFDKHGSQSLLQPG 150
Query: 184 --DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIF 240
++DL N+G+ G CPYF R + + +++ Y Y+IDP + + K SIL+F
Sbjct: 151 VYTLDDLRNMGKEKGWCPYFTARHMIRYANVIVYNYAYVIDPKISLLVSRDVEKESILVF 210
Query: 241 DEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISST--RRGQSSDETLNPDNFAILR 298
DEAHN++ +C +A S +++ L ++N +S + + + E L + ++
Sbjct: 211 DEAHNIDNVCIEALSVNINKKNLDGA---SRNIATLSRAIEKSKEQNAEQLRQEYERLVA 267
Query: 299 ALL-------LKLEKRIAEVPIN-SKELGFTKPGP------YIYELLADLNITQE----- 339
L L + P+ + EL PG +I + ++ +E
Sbjct: 268 GLQGSGAITGAPLSDQFGGDPVGFANELEQLIPGDIIQAHNFISFMRKVVDFLKERLRVS 327
Query: 340 TAYKLIDIVEVAAELLQEDKLQNKKST--TACRIESISNILKIIFRDKGT---------- 387
++ D V L+Q+ +LQ KS +A R++S+ + L+++ D T
Sbjct: 328 NTVEMTDNVPFVRSLMQKMQLQEPKSLRFSAQRLKSLLHTLEVVDVDTYTPLSLVADFCA 387
Query: 388 ---AHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSG 443
++ +++ + D +V L C + +A++ F + S+++TSG
Sbjct: 388 LVSTYTQGFKIIIEPFDERLPNV----PDPILHLACLDASLAIKPVFEHFQ--SVVITSG 441
Query: 444 TLSPMDSFAQELKLNF-PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
TLSP+D + + LNF PL ++ + I IV G LN+ Y++R
Sbjct: 442 TLSPIDLYPK--ILNFVPLTKTFEMSLSRQCICPMIVTRGSDQMPLNARYQSRSDRSIIH 499
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
G IV ++ VPDG+++FFPSY M++ + W N + E+I +K +E +
Sbjct: 500 NYGRLIVELSSCVPDGMVVFFPSYRYMEEVVGAWANGK------VLEQITTYKLLFIETQ 553
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
LA+E++ K GAVFF+V RGKV+EG+DF H GRAV+I G+PF
Sbjct: 554 DVVETTLALENF--KRACDCGRGAVFFSVARGKVAEGIDFDKHYGRAVIIIGIPFQYTLS 611
Query: 623 PKVRLKREYLDLQAQSQGGEY 643
+R + +Y+ + Q G++
Sbjct: 612 KILRARLDYMKERYQIDEGDF 632
>gi|156050655|ref|XP_001591289.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980]
gi|206557752|sp|A7ERG1.1|CHL1_SCLS1 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|154692315|gb|EDN92053.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 902
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 174/699 (24%), Positives = 279/699 (39%), Gaps = 133/699 (19%)
Query: 126 LGSREQLCIHREVSLLRG-SAQNNACRFLCKKGTNR--RCNHHSRVADYMKNNPHLGDEP 182
LGSR+ LCI+ +V+ L +A N C L + T + +C H P+ ++P
Sbjct: 237 LGSRKNLCINPKVNKLNSVTAINERCAELQQSSTPKEHKCPHL----------PNKDNKP 286
Query: 183 I-------------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL 229
+ DIED+ +G+ CPY+ +R K +IV PY L+ R+ L
Sbjct: 287 LVSTFRDHALATIRDIEDMGALGKEISICPYYASRSAIKPAEIVTLPYPLLLQKSAREAL 346
Query: 230 GVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETL 289
G+ K ++I DEAHNL A ++S L N + +R + +
Sbjct: 347 GISLKGHVVIIDEAHNLMDAIAGIYGTEMSLKELKLAKEMLGNYF-MKFAKRLKGKNRIY 405
Query: 290 NPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVE 349
++ +L+ L KR+ I+ G ELLA Q +KLI
Sbjct: 406 VAQAIRVVDSLMGYLMKRLEGTEID----GVVDQ----KELLAGKGADQIDLFKLI---- 453
Query: 350 VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSA------------------ 391
LQE KL K + +I I +K T S
Sbjct: 454 ---RYLQESKLARKVESYTEHTRNIKQASTIPHNNKETPKSTTPILHTLTSLLLALTHPT 510
Query: 392 -----YYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLS 446
++ + + + D++ TL + NP + +IIL GT+S
Sbjct: 511 TEGQLFFLKSTSTSPSPSPDLI------TLKFQLLNPAPHFESIVS-SARAIILAGGTMS 563
Query: 447 PMDSFAQELKLNFP----LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
P + L + P + HVI ++A V GP+G ++ NR + +
Sbjct: 564 PFSDYTSILFPSIPSHKITTLSCGHVIPKTHLFASTVSRGPTGIPFKWTFANRGNTDMMD 623
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCI--------------ACWKNTSHGNLTTIW 548
ELG ++N+ IVPDG+++FFPSY + + A T G TI
Sbjct: 624 ELGRVLLNVCTIVPDGVVVFFPSYNFLSTILYRFSIPSSGTGSATATATGTEKGKGKTIL 683
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
ER+ + KKP+ + + + Y + + GA+ F+V GK+SEG++F+D GR
Sbjct: 684 ERLSE-KKPIFQESKEESVETILAAYAKSIAE--GKGALLFSVVGGKLSEGINFSDALGR 740
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK--------------------- 647
V+I G+PF M + + + +++ A + + + K
Sbjct: 741 CVMIVGLPFPNMHTAEWKRRLRFIEESAVERLTSFYQEKESNNKDGNGNEEEGNGKKKEN 800
Query: 648 ---------LSFLSGE--DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
L GE D++ RAVNQ VGR IRHR D+ I+ DER+
Sbjct: 801 REKIQRDQILQQAKGEARDYFENVCMRAVNQCVGRAIRHRGDWAGILLLDERYKGERVVG 860
Query: 697 QISLWIQPHI--------QCYSKFGDVVYTLTRFFREER 727
+++ WI+ + FG ++ L RF R R
Sbjct: 861 KLAGWIREGVLRGEGMGMGDAGGFGRLMGGLGRFCRGRR 899
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 5 KIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
KI D P+ Y Q +M+ V L+ +LESPTGTGK+L L+C +L W
Sbjct: 13 KIHKKDFHHPYTPYPIQEKFMQTVYDVLEQGKIGILESPTGTGKSLSLICGSLTW 67
>gi|118376302|ref|XP_001021333.1| DNA repair helicase [Tetrahymena thermophila]
gi|89303100|gb|EAS01088.1| DNA repair helicase [Tetrahymena thermophila SB210]
Length = 807
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 189/749 (25%), Positives = 320/749 (42%), Gaps = 155/749 (20%)
Query: 35 KCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKL 94
K + ++E PTGTGKT+ LL ++ +S K
Sbjct: 2 KGHGIIEMPTGTGKTVSLLALITSYL---------------------------ESNQDKF 34
Query: 95 PTILYTSRTHSQLRQVIQELK-----------TSNYRPKMVILGSREQLCIHREVSLLRG 143
++Y +RT ++ + I+E+K ++ L +R LCIH VS +
Sbjct: 35 KKLIYCTRTVVEMEKTIEEVKFILDNRKQEKPEEQFKFLCTGLSARSNLCIHPNVSRQQS 94
Query: 144 SAQNNACRFLCKKGT------------NRRC----------NHHSRVADYMKNNPHLGDE 181
+ +A CKK T +R C + + +N +E
Sbjct: 95 RDRVDA---ECKKLTAPWVRAQSFEKSSRDCLIILSKIQGDSDQLELCQLFENFEGKKEE 151
Query: 182 ------PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVE-WK 234
++EDL G CPYF+ R L +I+ Y Y++D + L E WK
Sbjct: 152 LKFTEGIYNLEDLRQYGEKNNICPYFLARRLLNQSNIIVYNYMYMLDAKMTEILDKEFWK 211
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNF 294
+ +++FDEAHN++ +C + + D++ L + A I++ T+ + ET+N +
Sbjct: 212 DCLVVFDEAHNIDNVCLEVFTVDINRKL----LDMAYKNIEVLGTKVDRV--ETINHEKL 265
Query: 295 -----AILRALLLKLEKRIAEVPINSKEL-----------GFTKPGPYIYEL-------- 330
+L+ L K ++ NSK+L K P+I L
Sbjct: 266 ESEYNQLLQGLKNKGVLNDNQLNENSKQLPSELTAESIPFHIKKAKPFIQFLKKIVIFLK 325
Query: 331 --LADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTA 388
L + N T + + I+ + +++ L D K R+ + N L+I D+ +A
Sbjct: 326 NRLKEKNATTQDPPQFINDMYISSHL---DSYSLK--LAGERLNMLLNSLEITETDEFSA 380
Query: 389 HSAYYRVHVREADANAADVLK---------GKASRTL-SWWCFNPGIAMQE-FSRLEVGS 437
H A+ A K G + L ++ C + +AM F++ + S
Sbjct: 381 IDTI--THFTSLLASYARGFKIIYQPNPKDGSLNDPLMTFACLDCSLAMTHVFTQFK--S 436
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDS 497
+ILTSGT+SP+D + + LNF NP+ + I G L+S Y R +
Sbjct: 437 VILTSGTMSPLDIYPK--ILNF-----NPYTVK-----PLIATKGIDFTQLSSEYEARAN 484
Query: 498 IEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP 557
+ + G+ ++++++ VPDG++ FFPSY M++ I W N I + + K+K
Sbjct: 485 MTVTRSYGSLLIDLSKFVPDGIVAFFPSYMYMEKIIYEW------NQEGILDEMRKYKLL 538
Query: 558 VVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
E + + ++ Y K D GA+FF++ RGK++EG+DF +H GRAVV+ G P
Sbjct: 539 YFESKDVAQTSQSLFHY-RKACDCG-RGAIFFSIARGKIAEGIDFNEHYGRAVVMVGFPV 596
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
DP + + +YL + EY E A R Q +GRV+R +
Sbjct: 597 QNSKDPILIERCKYLTENFKITKNEYIEF-------------DAMRQTAQCLGRVMRGKT 643
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHI 706
DYG +I ++RFA KS++ WI+ +
Sbjct: 644 DYGIMIMAEKRFARSLVKSKLPNWIKKQM 672
>gi|403168572|ref|XP_003889745.1| DNA excision repair protein ERCC-2 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375167558|gb|EHS63460.1| DNA excision repair protein ERCC-2 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 784
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 188/749 (25%), Positives = 324/749 (43%), Gaps = 98/749 (13%)
Query: 4 YKIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I +++ FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +A++
Sbjct: 65 FTIDDLEILFPYDKIYPEQYAYMCDLKRTLDLGGHCVLEMPSGTGKTISLLSLIVAYQ-- 122
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPK 122
L ++ +V + +L ++ +LR + +
Sbjct: 123 ------LYYPERRKLVYCSRTVPEIEKALIELKRLMAYRAAQHRLRAGLTDNSAPTNEDD 176
Query: 123 MVILG--SREQLCIHREVSL-LRGSAQNNACRFL-----CKKG-----TNRRCNHHSRVA 169
+ +G SR+ LCIH +VS +G + CR L C+KG + C+ H ++
Sbjct: 177 FLGVGLTSRKNLCIHPQVSREKKGKVVDARCRDLTSAWACEKGRADPGSVPLCDFHEKLG 236
Query: 170 DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL 229
+ N + +E++ G G CPYF R + DI+ ++YL+DP +
Sbjct: 237 ELEPGN-LIPRGVWTLEEITAYGHQHGICPYFAVRRMLAHADIIIYSFHYLLDPKVATQV 295
Query: 230 GVEW-KNSILIFDEAHNLEGICADAASFDL----------SSGLLTACISEAKNCIDISS 278
E NSI++FDEAHN++ +C ++ S DL S G L I E K D S
Sbjct: 296 SKELLPNSIVVFDEAHNIDNVCIESLSIDLTKGMLDNAGKSIGALDEKIREIKRT-DASK 354
Query: 279 TRR---------GQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYE 329
+ GQS + + + AIL +L + VP N + +
Sbjct: 355 LQNEYERLVRGLGQSENTFESEEEAAILGNPVLPEDLLQEAVPGNIRR------AEHFTA 408
Query: 330 LLADLNITQETAYKLIDIV-EVAAELLQEDK---LQNKKSTTAC--RIESISNILKIIFR 383
L +T +++ +V E LQ K ++K C R+ S+ L++
Sbjct: 409 FLTRFVEYLKTRMRVLHVVAETPPSFLQHVKDLTYIDRKPLRFCADRLTSLIRTLELTDL 468
Query: 384 DKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG------- 436
D+ A A +L + T + NP + +G
Sbjct: 469 DQYNALQKVASFATLVATYEKGFLLILEPFETENATVPNPVFHSDVVFYVLLGTNPFFEG 528
Query: 437 --SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPS------GYLL 488
S+I+ G +SP + + + L F V + + +T + + +P+G + G
Sbjct: 529 FSSVIIPWGPISPREMYPK--MLGFGATVRDSYSMTLPRNF--FLPLGITRGSDQGGIFW 584
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
++N S+ + G ++ +IVPDG++ FFPSY M+ +A W + G L +W
Sbjct: 585 GFEFQNDPSV--VRNFGTILIEYCKIVPDGIVAFFPSYLYMESIVAAWHDM--GILKEVW 640
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
K+K VE + +A+E+Y + GAV +V RGKVSEG+DF + GR
Sbjct: 641 ----KYKLIFVETPDAVETSIALENYRRACDNGK--GAVLLSVARGKVSEGIDFDHNYGR 694
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
AV++ G+P+ ++ + E+L + + +Y L+F A R Q
Sbjct: 695 AVIMFGIPYQYTESRILKARLEFLRDNYRIRENDY----LTF---------DAMRHAAQC 741
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
VGRV+R + DYG ++F D+RFA +++Q
Sbjct: 742 VGRVLRGKTDYGLMVFADKRFARADKRAQ 770
>gi|424513271|emb|CCO66855.1| predicted protein [Bathycoccus prasinos]
Length = 770
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 192/779 (24%), Positives = 332/779 (42%), Gaps = 137/779 (17%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M ++ +L K + LE PTGTGKT+ LL ++ Q+ S
Sbjct: 1 MIELKHALDAKGHGALEMPTGTGKTITLLSLITSY----------------QLQYPHSC- 43
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI-------------LGSRE 130
++Y +RT ++ +V+ ELK YR + V L SR+
Sbjct: 44 ----------GKLIYCTRTVPEMEKVLAELKVLQKYREEHVEKGKEEETHILALGLSSRK 93
Query: 131 QLCIHREVSLLRGSAQ--NNACRFLC----------------KKGTNRRCN------HHS 166
LC++ +VS GS + + CR L +KGT + S
Sbjct: 94 NLCVNPKVSE-EGSRESVDARCRNLTASWVRDKAKEEAEEGDQKGTKIKTVLENEKIRKS 152
Query: 167 RVADYMKNNPHLGDEP------IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
+ ++ ++ LG E ++DL GR CPYF+ R+ + ++V Y YL
Sbjct: 153 NLCEFYEDLEALGAEAEVPKGVYTLQDLREFGREKRWCPYFLARQTLQRANVVVYNYQYL 212
Query: 221 IDPWFRKGLGVEWK-NSILIFDEAH------------NLEGICADAASFDLSSGLLTACI 267
+DP + E++ N+I++FDEAH NL DAA ++++ L I
Sbjct: 213 LDPKVAGLVSREFEDNAIVVFDEAHNIDNVCIEALSVNLRSQTLDAAQRNITT--LNTRI 270
Query: 268 SEAKNCIDISSTRRGQSSDETL-----NPDNFAILRALLLKLEKRIAEVPINSKELGFTK 322
+E K + +R Q E L N + R L I+E + G +
Sbjct: 271 TEVKK----TDRKRLQDEYERLVSGLANQGAISRQRGEDLMANPVISEDVVQEVIPGNIR 326
Query: 323 PGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQ----NKKSTTAC--RIESISN 376
+ ++ + +V+ A + + + K+ C R+ S+
Sbjct: 327 RAEHFVAIMRRFVEFLRHELRAPSVVQTAPRMFIQKSEAGGGVDAKTLKFCYDRLTSLLK 386
Query: 377 ILKIIFRDKGTAHS--AYYRVHVREADANAADVLKGKASR-------TLSWWCFNPGIAM 427
L+I+ ++ A S A + + D +++ R L C + +A+
Sbjct: 387 TLEIVDTEEFGALSSVADFATLIGTYDQGFTIIMEPYDERYPHIPDPVLQLACLDASLAV 446
Query: 428 QE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
+ F + + S+ +TSGTLSP+D + + LK + +T K + ++ G
Sbjct: 447 KPVFEKYQ--SVFITSGTLSPIDLYPRLLKFRPNVMKSLMMTLTRKCLCPMVITRGADQQ 504
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
++S + R+ Q G +V +A+ +PDG++ FF SY M+ I+ W +T
Sbjct: 505 HISSKFDMREDPNVIQNYGKVLVGLAQSIPDGIVAFFVSYSYMENIISKWHDTG------ 558
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
I I +HK +E + LA+++Y + + GAVF +V RGKV+EG+DF H
Sbjct: 559 ILREIMQHKLIFMETQDVVETSLALDNY--RRACNAGRGAVFLSVARGKVAEGIDFDRHY 616
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GRAVV+ G+P+ +R + EYL Q + +D+ A R +
Sbjct: 617 GRAVVMYGVPYQYTLSRILRARLEYLRETLQ-------------IKEQDFLTFDAIRQAS 663
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI--QCYSKFGDVVYTLTRFF 723
Q +GRVIR + DYG ++F D+R+ ++S++ WI H+ + + D+ T++R F
Sbjct: 664 QCIGRVIRSKADYGLMVFADKRYNSHDKRSKLPKWISNHMTEELLNLSTDMALTVSRAF 722
>gi|41055526|ref|NP_957220.1| TFIIH basal transcription factor complex helicase subunit [Danio
rerio]
gi|29437217|gb|AAH49410.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Danio rerio]
Length = 643
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 181/680 (26%), Positives = 308/680 (45%), Gaps = 105/680 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++K+
Sbjct: 5 IDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKTY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +V++EL K +Y K
Sbjct: 64 --------------------------PLEVTKLVYCSRTVPEIEKVVEELRKLMDYYSKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSR----VA 169
+ L SR+ LCIH EVS LR G + C L + R H S V
Sbjct: 98 TGVKNDFLALALSSRKNLCIHPEVSSLRFGKEVDGKCHSL--TASYIRAQHQSNPNQPVC 155
Query: 170 DYMKNNPHLGDE-PI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
+ + ++G + PI +++DL + GR G CPYF+ R +IV Y+YL+DP
Sbjct: 156 QFYEEFDNVGRQVPIPPGIYNLDDLKDFGRRKGWCPYFLARYALLHANIVVYSYHYLLDP 215
Query: 224 WFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC---ISEAKNCID-ISS 278
+ E K S+++FDEAHN++ +C D+ S +++ L C + +N I I
Sbjct: 216 KIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQTNVETLQNTISRIKE 275
Query: 279 TRRGQSSDET------LNPDNFA-----ILRALLLKLEKRIAEVP--INSKE--LGFTKP 323
T + +E L N A L +L E VP I + E +GF K
Sbjct: 276 TDAAKLREEYRRLVEGLKEANVARETDIYLSNPVLPDEILQEAVPGSIRTAEHFVGFMKR 335
Query: 324 G-PYIYELLADLNITQETAYKLI-DIVEVAAELLQEDKLQNKKSTTACRIESISNI---- 377
Y+ L ++ QE+A + + DI E + + ++ + R I++I
Sbjct: 336 FLEYLKARLRIHHVVQESAPQFLKDIFEKVCIDRKPLRFCAERLRSLLRTLEIADIADFS 395
Query: 378 -LKII--FRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRL 433
+ +I F + +S + + + + + A+ L + C +P IA++ F R
Sbjct: 396 PITLISHFATLVSTYSKGFTIIIEPFEDKTPTI----ANPVLHFSCMDPSIAIKPVFGRF 451
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYR 493
+ ++I+TSGTLSP+D + + L + + IV G + S +
Sbjct: 452 Q--TVIITSGTLSPLDIYPRILDFRPVTMASFTMTLARTCLCPLIVGRGNDQVAMTSKFE 509
Query: 494 NRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICK 553
R+ + GN ++ ++ IVPDG++ FF SY M+ +A W I E I +
Sbjct: 510 TREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYMYMENIVASWYEQG------ILENIQR 563
Query: 554 HKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV-- 611
+K +E + ++ +A+E Y ++ GA+ +V RGKVSEG+DF H R+ +
Sbjct: 564 NKLIFIETQDAAETSMALEKYQEACEN--GRGAILLSVARGKVSEGIDFVHHHVRSALCL 621
Query: 612 --------ITGMPFATMTDP 623
TG+P +++P
Sbjct: 622 HSEPNPQGTTGVPQRPVSNP 641
>gi|241623164|ref|XP_002407529.1| CHL1 protein, putative [Ixodes scapularis]
gi|215501004|gb|EEC10498.1| CHL1 protein, putative [Ixodes scapularis]
Length = 429
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 172/333 (51%), Gaps = 30/333 (9%)
Query: 407 VLKGKASRT----LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL--NFP 460
VL KA T L + NP ++ + ++IL GT+ P F +L + P
Sbjct: 111 VLVSKAGDTAGSYLKYVLLNPSNYFKDVVS-QARAVILAGGTMEPTSEFVDQLLIPAGVP 169
Query: 461 ----LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
L HV+ + A + GPSG L +Y+NR +E +ELGN ++N+AR+VP
Sbjct: 170 PERILHFACGHVVPKSNLCALALSQGPSGKTLEFTYQNRADVETIRELGNLLINVARVVP 229
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFP--LAIEDY 574
G++ FFPSY WK++ + E++ K EP +SS LA+
Sbjct: 230 GGVVCFFPSYEYEKVVSEKWKSSG------LLEKLAARKPIFREPVKSSELEKMLALYGQ 283
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
AK S++GA+ FAV GK+SEG++F+D GR VV+ G+PF P+++ K ++L+
Sbjct: 284 CAK----SSTGALLFAVVGGKMSEGINFSDDMGRCVVMVGLPFPNARSPEMKSKIDFLN- 338
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
Y ++ +G+ +Y+ +AVNQ++GR IRH+ DY I+ D+R+ PS
Sbjct: 339 ------ATYPQSSDGRSAGKVYYDNVCMKAVNQSIGRAIRHKDDYATILLVDQRYQRPSI 392
Query: 695 KSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+ WI+ + +SKFG + +FFR +R
Sbjct: 393 SKALPSWIRDSLAAHSKFGTAFAAIQQFFRVDR 425
>gi|429962537|gb|ELA42081.1| hypothetical protein VICG_00930 [Vittaforma corneae ATCC 50505]
Length = 599
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 175/716 (24%), Positives = 311/716 (43%), Gaps = 130/716 (18%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ 72
F + Y Q+ ++ VI ++ K A++ SPTGTGKTL LLCA + K ST
Sbjct: 5 FSRKLYPSQIKLIQDVINTINQKKMAIVSSPTGTGKTLSLLCALTNFVKK----STQEED 60
Query: 73 VNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQL 132
+ +S + + I Y SRTHSQL QVI EL++ YR K +ILGSR+
Sbjct: 61 LFELLSRTNRT------------KIYYCSRTHSQLSQVISELRSCKYRYKSIILGSRKVY 108
Query: 133 CIHREVSLLRG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNI 191
C++ EV+ + N+ C+ + + + C +H + + E +DIE+L
Sbjct: 109 CVNNEVNKITNIDLLNDRCKEMIRDDS---CKYHGK--------EYYTHETLDIEELKAC 157
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G CPY+ + +IV PYN L RK L + K+ I++ DEAHN+
Sbjct: 158 GIKERFCPYYHAKNRSADCEIVLLPYNLLFTAEGRKSLDISLKDKIVVVDEAHNIYDTVI 217
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
S +LS + I + +G S D + R+ + + ++ +
Sbjct: 218 QLNSAELSW-----------DSIKLIFNAKGLSEDLKFITSSILSFRSRVFQNNQKRTQN 266
Query: 312 PINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRI 371
++ E G Y + +N E +++E+ A+ ++ +KL K + I
Sbjct: 267 TLDG-ENGVGNESVY-----SVVNFLIECKIAKFNMLEI-ADFIETNKLAQKNDMKS--I 317
Query: 372 ESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFS 431
+ LK++ T + R+ AN + + + C +P + +E S
Sbjct: 318 FEFAKFLKLL-----TFSDSSGRIF-----ANNSKI---------KFSCISPKMYFEELS 358
Query: 432 RLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
E S+I GT+ P+ S LK FP + + ++ + I+ +G +N S
Sbjct: 359 --ECASVIFAGGTMEPIAS----LKAIFPEMLYFTYPAVNENFESVIITETVTGKQINLS 412
Query: 492 YRNRDSIEYKQELGNTIVNIAR-IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
+ R+ E ++ NT++ ++ +V G++IF PS M+
Sbjct: 413 FSYRN--EQIDDVLNTLIALSNPVVTGGVVIFVPSKQFME-------------------- 450
Query: 551 ICKHKKPVVEPRQSSLF--PLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
+ K + + R+ F + ED+ +K + A+ G +SEG++F+D R
Sbjct: 451 LLKKSQKIGNFRRKVYFGDDVLFEDFKSK-------PEILIAIMGGSLSEGINFSDEVCR 503
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQA 668
+V+ G+P+ T + +++ +++ S +D+ A + VNQ
Sbjct: 504 LLVVVGVPYPTRS----------VEIMERAK------------SVKDYETLVAMKTVNQT 541
Query: 669 VGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
VGR IRH+ DY AI+ D R+ + K ++S W+ + KF + + + F +
Sbjct: 542 VGRAIRHKDDYAAIVLLDCRYL--ALKERLSPWLHAKTKI-CKFSEGLLRINSFLK 594
>gi|440471332|gb|ELQ40355.1| DEAD_2 domain-containing protein [Magnaporthe oryzae Y34]
Length = 1458
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 186/731 (25%), Positives = 308/731 (42%), Gaps = 157/731 (21%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--------RP-------------KMVILGSREQLCIH 135
I YTSRTHSQL Q I EL+ N+ P K V L SR++LCI+
Sbjct: 779 IFYTSRTHSQLTQFISELRRPNFPSSFPGADEPSLSKTETGTRECVKHVPLSSRQKLCIN 838
Query: 136 REVSLLRG-SAQNNACRFLCK---KGTNRRCNHHSRVADYMKNNPHLGDEPI----DIED 187
V+ L +A N+ C L K K +RC + D + D + DIED
Sbjct: 839 PAVARLGSVAAINDRCTELQKSKAKSEGKRCPYVPS-QDNLSETHQFRDASLATIPDIED 897
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLE 247
+G++ + S+++ DEAHN+
Sbjct: 898 AHKLGKSL--------------------------------------QGSVVVVDEAHNI- 918
Query: 248 GICADAASFDLSSGLLTACISEAKNCIDISSTRRGQ---SSDETLNPDNFAILRALLLKL 304
DA + S+ + + + + I + R G+ + + + +++ L L
Sbjct: 919 ---MDAIAGVHSAEIRLEDLRRGREMLSIYAKRFGKKLKAENRIMVGQVARVIQGLSEWL 975
Query: 305 EKRIAEVPINSKELGFTKP-------GPYIYELLADLNITQET--AYKLIDIVEVAAELL 355
E+ + + S E G P G ++ A ++ QE+ AYK+ EL
Sbjct: 976 ERALEQ----SVEHGIIDPRVLLKTKGMDQIDMFALISYIQESKLAYKIESYAAHVDELE 1031
Query: 356 QEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRT 415
+ K Q K T+ + ++S+ L + + T ++ V + + D+
Sbjct: 1032 EASKGQKKTIRTSPVLHNLSSFL-LALTNLSTEGRIFFEKVVVDGGSKQYDI-------K 1083
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP----LRVENPHVITS 471
LS+ +P A + ++IL GT+SP + L + P ++ HVI S
Sbjct: 1084 LSYMLLSPTYAFSSIA-TSARAVILAGGTMSPFQDYETHLFPSHPQHKITKLSCGHVIPS 1142
Query: 472 KQ--IW--AGIVPVGPSGY--LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
+W A + P P+G L S++ R Q+LG I+NI VPDG+++FFPS
Sbjct: 1143 SNLCVWTLASMRPATPAGNSDLFEFSFQKRRDKTMIQQLGTAILNICSAVPDGVVVFFPS 1202
Query: 526 YYLMDQCIACWKN----TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM------ 575
Y +D+ +A + T ++IW+++ + +K V + +EDY
Sbjct: 1203 YGYLDEVVAALQQKLAATGTAPNSSIWDKL-QSRKAVFRETKGGSSDQVLEDYSNAILGE 1261
Query: 576 ----AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY 631
K + S +GA+ +V GK+SEG++F+D GR VVI G+P+ + P+ + + EY
Sbjct: 1262 KDAEGKQRSPSQNGALLLSVVGGKMSEGINFSDRLGRCVVIVGLPYPNVASPEWKARMEY 1321
Query: 632 ---------LDLQAQSQGGEY--KETKLS-------------------FLSGEDWYNQQA 661
LD Q + G+ +E+ S + D+Y
Sbjct: 1322 IDSSTVAGLLDKQNGTTAGDVSARESTPSATVTKPPSTITREQAAAAGKQAARDFYENAC 1381
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ---PHIQCYSKFG--DVV 716
RAVNQ++GR IRHR DY AI+ D RF ++++ WI+ I K G ++
Sbjct: 1382 MRAVNQSIGRAIRHRGDYAAIVLLDRRFGTERIRAKLPGWIRCAMAPIGSNEKTGLPGLM 1441
Query: 717 YTLTRFFREER 727
TL +FFRE++
Sbjct: 1442 GTLNKFFREKK 1452
>gi|351702333|gb|EHB05252.1| Putative ATP-dependent RNA helicase DDX11-like protein
[Heterocephalus glaber]
Length = 953
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 175/706 (24%), Positives = 302/706 (42%), Gaps = 111/706 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKK 156
I Y SRTHSQL Q +QE N + LGS QL R V + R S + R +K
Sbjct: 279 IYYCSRTHSQLAQFVQENLCVNE--DVRSLGS-VQLINDRCVEIQR-SQHKSKSRAEEEK 334
Query: 157 GTNRRCNHHSRVADYMKNNPH---LGDEPI----DIEDLVNIGRTFGPCPYFMTRELQKT 209
RR +R A N+ L DE + D+E LV +G+ CPY+ +R
Sbjct: 335 PKRRR--QEARAACPFYNHEQMQLLRDEILVEVRDVEQLVALGKEARACPYYGSRLAIAA 392
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
+V PY R+ G+ + ++I DEAHNL D +G+ + ++
Sbjct: 393 AQLVVLPYPT------RQAAGIRLQGQVVIIDEAHNL---------IDTITGIHSVEVTG 437
Query: 270 AKNCIDISST-RRGQSSDETLNPDNFAILRALLLKLEKRIA----EVPINSKELGFTKPG 324
++ C S + + + L N ++ +L LEK +A ++ N ++ G
Sbjct: 438 SQLCQAHSQLLQYTERYRKRLKAKNLMYIKQILYLLEKFVAVLGGDIRQNPNTRSLSQTG 497
Query: 325 P-------YIYELLAD-LNITQETAY--------KLIDIVEVAAELLQEDKLQNKKSTTA 368
+++E D +N+ + Y KL E +L + Q++ +
Sbjct: 498 TELKTINDFLFESQVDNINLFKVQRYCEKSKVSRKLCGFTERYGAVLPPPQQQSRLAGLQ 557
Query: 369 CRIESI------SNILKIIFRDKGTAHSAYYRVHVR-------EADANAADVLKGKAS-- 413
++S+ + + + G +A +HV A+ + +L + S
Sbjct: 558 HFLQSLQPSTTEAPAAPLEEAEPGAVRAASPLMHVEGFLSALTTANQDGRVILSRQGSLS 617
Query: 414 -RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------P 466
+L + NP + + + E ++++ GT+ P+ F ++L + E
Sbjct: 618 QSSLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCG 676
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HVI I ++ GP+ L +Y+ R+ E G + N+ +VP GL+ FFPSY
Sbjct: 677 HVIPPDNILPLVLCSGPTNQQLEFTYQKREVPAMMDEAGRILCNLCNVVPGGLVCFFPSY 736
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST--- 583
Q +A W + G LT R+ KK EP+++ + Y ++ +
Sbjct: 737 EYQHQVLAHWGKS--GLLT----RLAVRKKIFQEPKRAGQVEQVLAAYARCIESCARASG 790
Query: 584 --SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
+GA+ AV GK+SEG++F+D GR VV+ GMP+ ++ P+++ K YLD + G
Sbjct: 791 PGTGALLLAVVGGKMSEGINFSDDLGRCVVMVGMPYPSIRAPELQEKMAYLDQRLPGTPG 850
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAV---------------------GRVIRHRHDYG 680
+ G+ +AVNQ+V GR IRH+ D+
Sbjct: 851 QVP-------PGKALVENLCMKAVNQSVGEPGAVLALDAQPGTDGQRGGGRAIRHQRDFA 903
Query: 681 AIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREE 726
+I+ D+R+A P +++ WI+ ++ + FG L +F RE+
Sbjct: 904 SIVLLDQRYARPPVLAKLPAWIRDRVEVKATFGAAFAALRKFHREK 949
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T ++ GI FPF Y Q +M ++ Q L+ + ESPTGTGK+L L+C L+W
Sbjct: 22 TQEVGGIHFPFPFPPYSIQKDFMAELYQVLEAGKIGIFESPTGTGKSLSLICGALSW 78
>gi|398016273|ref|XP_003861325.1| TFIIH basal transcription factor complex helicase subunit, putative
[Leishmania donovani]
gi|322499550|emb|CBZ34624.1| TFIIH basal transcription factor complex helicase subunit, putative
[Leishmania donovani]
Length = 813
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 181/762 (23%), Positives = 333/762 (43%), Gaps = 116/762 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ + V FP+E Y QL Y+ ++ + L + +LE P+GTGKT+ LL +A+
Sbjct: 5 VEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQ--ELKTSNYRP- 121
+++ + V +++ + + +T ++R++++ E + RP
Sbjct: 60 --------LHHHAHEKRKVVYCTRTVEEMV-------KTMGEMRKLLKHWEAEGEQLRPL 104
Query: 122 KMVILGSREQLCIHREV-SLLRGSAQNNACRFLCKKGTNR-RCNHHSRVADYMKNNP-HL 178
+ + L +++ LCI V SL+ + CR + RC ++ D + P L
Sbjct: 105 RGLCLTAKKNLCIETSVASLIHPDEVDAGCRSITAPWQQEGRCGYY----DTLAQAPLEL 160
Query: 179 GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW--KNS 236
++DL + G CPY++ R+ VDI+ Y Y++DP + + E+ +N+
Sbjct: 161 PPGVYSLDDLKDFGEQHHVCPYYLVRKALPVVDIIVHSYLYMVDPVVSE-VTKEFLNENT 219
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDIS-------STRRGQSSDETL 289
I++ DE HN++ +C +A S L+ + +N D+S +T R DE
Sbjct: 220 IVVMDEGHNVDDVCIEAMSLILTK---KDSLDAKQNMKDLSKELDHLKATNRQMLQDEYD 276
Query: 290 NPDNFAILRALLLKLEKRI----AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLI 345
N + + E+R +P N E LA + + ++++
Sbjct: 277 RLVNGLAMTEMARDPEQRALVEAPAIPANVAEGAIPASLRQANHFLAFMQRLVDFTHRIV 336
Query: 346 DIVE---VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR-------- 394
+ VA L KL+ + + +S LK++ ++ YR
Sbjct: 337 ARITRTYVADPLTFLTKLKEECALEISHFRYLSERLKVLLTTLQVTNAGKYRPVALIAQM 396
Query: 395 ------------------VHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEV 435
V V EA + RT+ C + +A+++ F+R
Sbjct: 397 YTLLSMYYTDDRYEKPGFVVVCEAFDPTRPQIPDPVIRTV---CVDASLALRDTFARYR- 452
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP-----VGPSGYLLNS 490
S+ILTSGTLSPMD + + L + ++ K I IV V + + S
Sbjct: 453 -SVILTSGTLSPMDIYPKILGFTPAISKSFQMTLSRKCIAPVIVTRSSESVSITAEEVTS 511
Query: 491 SYRNRDSIEYKQELGNT----IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
S++ R + + + + ++ +A+ VPDG++ FF Y M + + W ++
Sbjct: 512 SFKVRTNPTAQALVTSAYESLLLELAKTVPDGMVCFFTGYQYMGEVLLAWHSSG------ 565
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+++ KHK VE + +A+ +Y + D GA+F ++ RGK++EG+DF H
Sbjct: 566 FLQKLAKHKLIFVETQGVEETSVALANY-RRACDIG-RGAIFMSIARGKIAEGIDFDRHY 623
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GRAVV+ G+PF D +R + ++++ E++ N A R +
Sbjct: 624 GRAVVMFGVPFLPPNDEPLRQRMHWMEVCLGISESEFR-------------NFDAMRQAS 670
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
Q +GRV+R++ DYG ++ D+RFA + +I WI +QC
Sbjct: 671 QCIGRVLRNKTDYGMMLLVDKRFALNDKVKKIPRWI---VQC 709
>gi|389583177|dbj|GAB65913.1| DNA excision-repair helicase, partial [Plasmodium cynomolgi strain
B]
Length = 738
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 185/782 (23%), Positives = 341/782 (43%), Gaps = 149/782 (19%)
Query: 1 MPTYKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M +++ ++V FP++ Y Q YM + ++L ++ + +LE PTGTGKT+ +
Sbjct: 1 MVVFQLDDLEVFFPYDYIYPEQYAYMRYLKKTLDSEGHCVLEMPTGTGKTVAIF------ 54
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY 119
S + S Q G + ++ +RTH + ++ +E +
Sbjct: 55 ----------------------SLITSYQYGKNDEGKFIFCTRTHER-EKIDEECR---- 87
Query: 120 RPKMVILGSREQLCIHREVSLLRGSAQNNACR---FLCKK-------------GTNRRCN 163
K+ RE+ I+++++ L G+A ++ R F+ K T+
Sbjct: 88 --KLTATFIREKKYINQKINKL-GNAHSDRDRISEFIVKNKQHIDVEDYFDIYNTSNSLE 144
Query: 164 HHSRVA------DYMKNNPHLGDEP--IDIEDLVNIGRTFGP--------CPYFMTRELQ 207
++ + +Y K +P IEDL + + + CPYF +++
Sbjct: 145 EYNEIGLCGYFENYKKEFQFELIQPGVYTIEDLKILCKGYKNAQNVSVPICPYFCAKKII 204
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVE---------WKNSILIFDEAHNLEGICADAASFDL 258
+ ++ Y Y+IDP K L + KN I++FDEAHN++ +C +A S L
Sbjct: 205 EVAKVIVLNYQYVIDPKVSKSLFIGRDVNNRVNLQKNDIIVFDEAHNIDSVCLEALSLKL 264
Query: 259 -SSGLLTACISEAKNCIDISSTRRGQSSDETL----------NPDNFAILRALLLKLEKR 307
SE K+ +SS +S D +L +P L+ + K
Sbjct: 265 LGQSTEQPITSEKKDQTAVSSLFPEESKDYSLLTNSNNEGGEDPTELHYSPLLMEDIVKN 324
Query: 308 IAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAE----LLQEDKLQNK 363
+ +P N ++ L + + K ++I E+ +E L + + + K
Sbjct: 325 VI-IPGNIRKAE---------HFLNLMRVVVMYLKKYVNIYEITSEGPLSFLYKCERETK 374
Query: 364 KSTTA---C--RIESISNILKIIFRDKGTAHS----------AYYR--VHVREADANAAD 406
T+ C R++ I N L+I+ + +A + +Y++ + + E A
Sbjct: 375 LDTSFFKFCFDRLKGILNALQIVNVEDYSALNIVCNFCTLLGSYFQGFIIICEPYPEAT- 433
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP 466
G + + C + IAM+ + + S+ILTSGT++P++ + + L L P
Sbjct: 434 ---GIYDPVIQFACLDSSIAMKSVIK-KYRSVILTSGTITPLELYPKLLNFKTVLTASFP 489
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
+ IV L+S + R I + G +V + + +PDG++ +FPSY
Sbjct: 490 MSFDRNCVCPLIVTKSSDLVPLSSQFSLRSDITVIKNYGMLLVEMCKTIPDGIVAYFPSY 549
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGA 586
M++ I+ W G +T+I + HK +E + +A+ ++ K GA
Sbjct: 550 IYMEEVISSWYEL--GIITSILD----HKLVFIETKDIVSTTIALHNF--KRACDLGKGA 601
Query: 587 VFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET 646
VF ++CRGK++EG+DF H G+ V++ G+P+ ++ + ++L Q E+
Sbjct: 602 VFLSICRGKIAEGIDFDKHYGKCVILFGIPYQYTLSRILKSRLDFLKETYNIQENEF--- 658
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
L+F A R +Q VGR+IR++ DYG +IF D R+A +KS++ WI I
Sbjct: 659 -LTF---------DAMRQASQCVGRIIRNKKDYGIMIFADIRYARNDKKSKLPPWI---I 705
Query: 707 QC 708
+C
Sbjct: 706 KC 707
>gi|388854508|emb|CCF51895.1| related to CHL1-protein of the DEAH box family [Ustilago hordei]
Length = 931
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 153/299 (51%), Gaps = 11/299 (3%)
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFP----LRVENPHVITSKQIWAGIVPVGPSGYLLN 489
E S+IL GT+ P+ F Q+L P + HVI + ++ P G
Sbjct: 632 EARSVILAGGTMEPISDFRQQLLPFLPSDRLVTFSCGHVIPPSNLMVSVLSSSPKGLPFE 691
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
+RD+ + +LG T+VN+ I+P GL++F PSY +D+ +A WK+ + G + +
Sbjct: 692 FKLDSRDNTDMLDQLGKTLVNLCNIIPAGLVVFVPSYAFLDKLMARWKDAASGQ---VLQ 748
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLK---DTSTSGAVFFAVCRGKVSEGLDFADHA 606
R+ KK +EP+ + + +Y A ++ GA+ AV K+SEG++F+D
Sbjct: 749 RLSAKKKIFIEPKTTMQVDKVLAEYTAAIRAEQGRGGGGAIMLAVVGAKLSEGINFSDDL 808
Query: 607 GRAVVITGMPFATMTDPKVRLKREYL-DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAV 665
R VV+ GMPFA + P++ + +Y+ DL Q++ G++ Y +AV
Sbjct: 809 ARGVVMVGMPFANINSPELAERIKYVRDLAKQARTTSNLSMPKVADPGDELYTNLCMKAV 868
Query: 666 NQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
NQ++GR +RH+ DY A+I D R+ P + ++ WI+ + +FG ++ FF+
Sbjct: 869 NQSIGRAVRHQKDYAALILLDRRYGRPEIRQRLPAWIRNQVTVAERFGGMIQQTAAFFK 927
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 23/175 (13%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP-----------KMVILGSREQLCIHREV---S 139
LP I+Y SRTHSQL Q + ELK +++ + + L SR+Q+CI+++V +
Sbjct: 238 LPRIIYASRTHSQLSQFVAELKKTSFGQVDVLDAEKMPVRTIALASRKQMCINQDVQRIA 297
Query: 140 LLRGS-AQNNACRFLCK-KGTNRRC------NHHSRVADYMKNNPHLGDEPIDIEDLVNI 191
++GS A N C L K K RC + R A+ ++ E DIEDLV +
Sbjct: 298 SIKGSEAMNERCLELIKAKKGKGRCALLPTFDQVGR-AEILEFRDAAMAEVGDIEDLVQL 356
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
G + CPYF R K ++V PYN L+ R+ LG+ K I++ DEAHNL
Sbjct: 357 GISTKTCPYFAARSSAKQAELVTLPYNLLLQKDARQSLGISLKGCIVLIDEAHNL 411
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 12 EFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
+FPF EAY QL M +V ++++ + ESPTGTGK+L L+CA W
Sbjct: 27 QFPFPEAYSIQLDLMRQVFSTIEDGKVGIFESPTGTGKSLSLICAAFTW 75
>gi|444730736|gb|ELW71110.1| TFIIH basal transcription factor complex helicase XPD subunit
[Tupaia chinensis]
Length = 732
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 187/752 (24%), Positives = 326/752 (43%), Gaps = 134/752 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + S +
Sbjct: 98 DGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRVQYQQDSSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +GR G C P+F
Sbjct: 158 YEEFDAHGRQVPLPMGIYNLDDLKALGRRQGWC------------------------PYF 193
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN----CID---ISS 278
+ N ++++ + L+ AD S +L+ + EA N CID ++
Sbjct: 194 LARYSILHAN-VVVYSYHYLLDPKIADLVSKELARKAVVV-FDEAHNIDNVCIDSMSVNL 251
Query: 279 TRRG----QSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
TRR Q++ ETL I +L + + +E + LA+
Sbjct: 252 TRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARETD---AHLANP 308
Query: 335 NITQETAYKLIDIVE-----VAAELLQEDKLQNKK-STTACRIESISNILKI-------- 380
+ E ++ +V+ + L Q +Q K A R+ S+ + L+I
Sbjct: 309 VLPDEWRLRVQHVVQESPPAFLSSLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSP 368
Query: 381 --IFRDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLE 434
+ + T S Y + + + D + A+ L + C + +A++ FSR +
Sbjct: 369 LTLLANFATLVSTYAKGFTIIIEPFDDRTPTI----ANPILHFSCMDASLAIKPVFSRFQ 424
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
S+I+TSGTLSP+D + + L + + + I+ G ++S +
Sbjct: 425 --SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFET 482
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R+ I + GN ++ ++ +VPDG++ FF SY M+ +A W I E I ++
Sbjct: 483 REDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQG------ILENIQRN 536
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K +E + + +A+E Y ++ GA+ +V RGKVSEG+DF H GRAV++ G
Sbjct: 537 KLLFIETQDGAETSVALEKYQEACENGR--GAILLSVARGKVSEGIDFVHHYGRAVIMFG 594
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+ ++ + EYL Q Q + ++ L+F A R Q VGR IR
Sbjct: 595 VPYVYTQSRILKARLEYLRDQFQIRENDF----LTF---------DAMRHAAQCVGRAIR 641
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 642 GKTDYGLMVFADKRFARADKRGKLPRWIQEHL 673
>gi|123491434|ref|XP_001325843.1| helicase [Trichomonas vaginalis G3]
gi|121908748|gb|EAY13620.1| helicase, putative [Trichomonas vaginalis G3]
Length = 747
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 161/312 (51%), Gaps = 37/312 (11%)
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGI 478
+CF P A E L+ +IILTSGTL+P+++FA FP+ +ENPH+ +Q+
Sbjct: 369 YCFTPEKAFSEIVNLQPRTIILTSGTLAPLETFASYFGYKFPIILENPHIAKPEQLLVIC 428
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
GP G L+ +Y NR+ + K EL + + + + P+G L+FFPS+ +
Sbjct: 429 CGEGPFGNRLSFTYANRNDNQQKVELKSALSKLFSLSPNGSLVFFPSF----------SS 478
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
S ++ +I + KK +EPR F + + K GA FAVCRGK+SE
Sbjct: 479 LSEFDVHSIDTK----KKIFIEPRTFGDFSSIVSQF--KENAVKEEGAALFAVCRGKMSE 532
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G+DF+D R+V + G+PF DPKV L++++ +++ +G SG WY
Sbjct: 533 GIDFSDDYARSVFVVGIPFPNTKDPKVILRKQF--YESKKKG-----------SGMKWYI 579
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL---WIQPHIQCYSKFGDV 715
A R VNQ++GR IRH+ D+ ++ D R+ I L W++P + + + +
Sbjct: 580 DSAMRVVNQSIGRAIRHKDDWSVVVLIDNRY-----DGMIELLPKWVKPSVITLNNWNVL 634
Query: 716 VYTLTRFFREER 727
L F+ E+R
Sbjct: 635 EKKLKLFYEEKR 646
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 136/265 (51%), Gaps = 39/265 (14%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGS 65
I + + FP++ Y Q YM KVI+S A+LESPTGTGKTL LLC+ L+WR+ +
Sbjct: 5 INEVSIHFPYKPYPLQETYMSKVIESCDTGNYAILESPTGTGKTLSLLCSVLSWRQQRNT 64
Query: 66 FSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVI 125
S I+Y+SRTHSQL VI+ELK + ++P I
Sbjct: 65 SS----------------------------RIIYSSRTHSQLSNVIKELKRTKFQPTTSI 96
Query: 126 LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRC--NHHSRVADYMKNNPHLGDEPI 183
+ SR LC+H + + S Q+ CR L +K +C ++ S++ K + + +
Sbjct: 97 IASRTYLCLHDNIQKMESSLQSRFCRELRQKN---QCIYDNESKIEQVSK---KVINSLL 150
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL-GVEWKNSILIFDE 242
DI+ V+I R CP+F+++ KT D + +PY Y+ DP R L V + S++IFDE
Sbjct: 151 DIDSFVDICRNEAVCPFFVSQFNVKTADFILSPYTYIADPISRSSLPSVVFNKSVVIFDE 210
Query: 243 AHNLEGICADAASFDLSSGLLTACI 267
AHN C + F +S C+
Sbjct: 211 AHNFPEQCCEY--FSMSVPFNKFCV 233
>gi|146088245|ref|XP_001466027.1| TFIIH basal transcription factor complex helicase subunit
[Leishmania infantum JPCM5]
gi|134070128|emb|CAM68462.1| TFIIH basal transcription factor complex helicase subunit
[Leishmania infantum JPCM5]
Length = 813
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 181/762 (23%), Positives = 332/762 (43%), Gaps = 116/762 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ + V FP+E Y QL Y+ ++ + L + +LE P+GTGKT+ LL +A+
Sbjct: 5 VEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQ--ELKTSNYRP- 121
+++ + V +++ + + +T ++R++++ E + RP
Sbjct: 60 --------LHHHAHEKRKVVYCTRTVEEMV-------KTMGEMRKLLKHWEAEGEQLRPL 104
Query: 122 KMVILGSREQLCIHREV-SLLRGSAQNNACRFLCKKGTNR-RCNHHSRVADYMKNNP-HL 178
+ + L +++ LCI V SL+ + CR + RC + D + P L
Sbjct: 105 RGLCLTAKKNLCIETSVASLIHPDEVDAGCRSITAPWQQEGRCGYF----DTLAQAPLEL 160
Query: 179 GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW--KNS 236
++DL + G CPY++ R+ VDI+ Y Y++DP + + E+ +N+
Sbjct: 161 PPGVYSLDDLKDFGEQHHVCPYYLVRKALPVVDIIVHSYLYMVDPVVSE-VTKEFLNENT 219
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDIS-------STRRGQSSDETL 289
I++ DE HN++ +C +A S L+ + +N D+S +T R DE
Sbjct: 220 IVVMDEGHNVDDVCIEAMSLILTK---KDSLDAKQNMKDLSKELDHLKATNRQMLQDEYD 276
Query: 290 NPDNFAILRALLLKLEKRI----AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLI 345
N + + E+R +P N E LA + + ++++
Sbjct: 277 RLVNGLAMTEMARDPEQRALVEAPAIPANVAEGAIPASLRQANHFLAFMQRLVDFTHRIV 336
Query: 346 DIVE---VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR-------- 394
+ VA L KL+ + + +S LK++ ++ YR
Sbjct: 337 ARITRTYVADPLTFLTKLKEECALEISHFRYLSERLKVLLTTLQVTNAGKYRPVALIAQM 396
Query: 395 ------------------VHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEV 435
V V EA + RT+ C + +A+++ F+R
Sbjct: 397 YTLLSMYYTDDRYEKPGFVVVCEAFDPTRPQIPDPVIRTV---CVDASLALRDTFARYR- 452
Query: 436 GSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP-----VGPSGYLLNS 490
S+ILTSGTLSPMD + + L + ++ K I IV V + + S
Sbjct: 453 -SVILTSGTLSPMDIYPKILGFTPAISKSFQMTLSRKCIAPVIVTRSSESVSITAEEVTS 511
Query: 491 SYRNRDSIEYKQELGNT----IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
S++ R + + + + ++ +A+ VPDG++ FF Y M + + W ++
Sbjct: 512 SFKVRTNPTAQALVTSAYESLLLELAKTVPDGMVCFFTGYQYMGEVLLAWHSSG------ 565
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+++ KHK VE + +A+ +Y + D GA+F ++ RGK++EG+DF H
Sbjct: 566 FLQKLAKHKLIFVETQGVEETSVALANY-RRACDIG-RGAIFMSIARGKIAEGIDFDRHY 623
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GRAVV+ G+PF D +R + ++++ E++ N A R +
Sbjct: 624 GRAVVMFGVPFLPPNDEPLRQRMHWMEVCLGISESEFR-------------NFDAMRQAS 670
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
Q +GRV+R++ DYG ++ D+RFA + +I WI +QC
Sbjct: 671 QCIGRVLRNKTDYGMMLLVDKRFALNDKVKKIPRWI---VQC 709
>gi|426243940|ref|XP_004015798.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Ovis aries]
Length = 759
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 183/748 (24%), Positives = 321/748 (42%), Gaps = 139/748 (18%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 45 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 103
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYRP- 121
++ ++Y SRT ++ +VI+EL+ S Y
Sbjct: 104 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQ 137
Query: 122 ---KMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
K+ LG SR+ LCIH EV+ LR G + C L + S +
Sbjct: 138 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRF 197
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +GR G C P+F
Sbjct: 198 YEEFDVHGRQVPLPTGIYNLDDLKAVGRRQGWC------------------------PYF 233
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN----CID---ISS 278
+ N ++++ + L+ AD S +L+ + EA N CID ++
Sbjct: 234 LARYSILHAN-VVVYSYHYLLDPKIADLVSKELARKAVVV-FDEAHNIDNVCIDSMSVNL 291
Query: 279 TRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQ 338
TRR + N L+ +L+ ++ + E + + E L + + +
Sbjct: 292 TRRTLDRCQA----NLETLQKTVLRYKE--------TDEQRLREEYRRLVEGLREASAAR 339
Query: 339 ETAYKLIDIV----EVAAELLQEDKLQNKKSTTAC--RIESISNILKI----------IF 382
ET L + V + L+ L + C R+ S+ + L+I +
Sbjct: 340 ETDAHLANPVLPDEVLKGPLIAPQPLGRSQPLRFCAERLRSLLHTLEISDLTDFSPLTLL 399
Query: 383 RDKGTAHSAY---YRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSI 438
+ T S Y + + + D + A+ L + C + +A++ F R + S+
Sbjct: 400 ANFATLVSTYAKGFTIIIEPFDDRTPTI----ANPILHFSCMDASLAIKPVFERFQ--SV 453
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
I+TSGTLSP+D + + L + + + I+ G ++S + R+ I
Sbjct: 454 IITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDI 513
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
+ GN ++ ++ +VPDG++ FF SY M+ +A W I E I ++K
Sbjct: 514 AVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQG------ILENIQRNKLLF 567
Query: 559 VEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFA 618
+E + + +A+E Y ++ GA+ +V RGKVSEG+DF H GRAV++ G+P+
Sbjct: 568 IETQDGAETSVALEKYQEACENGR--GAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYV 625
Query: 619 TMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHD 678
++ + EYL Q Q + D+ A R Q VGR IR + D
Sbjct: 626 YTQSRILKARLEYLRDQFQ-------------IRENDFLTFDAMRHAAQCVGRAIRGKTD 672
Query: 679 YGAIIFCDERFAHPSRKSQISLWIQPHI 706
YG ++F D+RFA ++ ++ WIQ H+
Sbjct: 673 YGLMVFADKRFARADKRGKLPRWIQEHL 700
>gi|71994598|ref|NP_497182.2| Protein Y50D7A.2 [Caenorhabditis elegans]
gi|351059416|emb|CCD73788.1| Protein Y50D7A.2 [Caenorhabditis elegans]
Length = 606
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/566 (25%), Positives = 257/566 (45%), Gaps = 89/566 (15%)
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAH 244
EDL ++GR CPYF R+ IV Y+Y++DP + + ++ + S+++FDEAH
Sbjct: 27 EDLRSLGREKKICPYFTARQAINRAHIVVYSYHYILDPKIAELVSKDFSRKSVVVFDEAH 86
Query: 245 NLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKL 304
N++ +C ++ S +S + E ++ ++ R S+ E L + ++ L
Sbjct: 87 NIDNVCIESMSVAISQKNADRALQELQS-LEGVVNRMKSSNSEKLQSEYDKLVEGL---- 141
Query: 305 EKRIAEVPINSKELGF-TKPGPYIYELLADLNITQETAYKLI----------------DI 347
KR N + L P ++E + NI Q + L +
Sbjct: 142 -KRTERERANDERLANPVLPDQILHEAVPG-NIRQANHFLLFLKRFVEYIRHRLRTHQVL 199
Query: 348 VEVAAELLQE--DKLQNKKSTTACRIESISNILKII-FRDKG---------------TAH 389
+E A +++ D++ ++ E +SN++K + D G + +
Sbjct: 200 IESPAAFMKDILDRMCIERKPMRFCAERLSNLVKTLEITDNGDVWALSQVTTLCTLVSTY 259
Query: 390 SAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPM 448
S + V V D + V+ TLS C + IA++ SR + S+I+TSGTLSP+
Sbjct: 260 SKGFSVIVEPQDGSQLAVI------TLS--CHDASIAIRPVMSRFQ--SVIITSGTLSPL 309
Query: 449 DSFAQELKLNFPLRVENPHVITSKQIWAG-------IVPVGPSGYLLNSSYRNRDSIEYK 501
+ + + L + P VI S + +V G + S + R +
Sbjct: 310 EMYPKVLDFD-------PSVIASFTMTLARPCLSPLVVARGNDQVAMTSRFEQRADVAVI 362
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEP 561
+ GN ++ +A +VPDG+++FF SY M+ I W I + + K+K +E
Sbjct: 363 RNYGNLVLEMASLVPDGMVVFFTSYLYMENVIGVWYEQH------IIDELMKYKLLFIET 416
Query: 562 RQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMT 621
+ A+E Y+ S GAV F+V RGKVSEG+DF+ H GR V++ G+P+
Sbjct: 417 NDALETSAALEKYVEACD--SGRGAVLFSVARGKVSEGIDFSHHLGRCVIMLGIPYMYTE 474
Query: 622 DPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
+R + EYL + Q G + D+ A R Q +GR +R + DYG
Sbjct: 475 SRVLRARLEYL----RDQFG---------IKENDFLTFDAMRHTAQCMGRALRSKTDYGL 521
Query: 682 IIFCDERFAHPSRKSQISLWIQPHIQ 707
++F D+RF+ ++ ++ W+Q +++
Sbjct: 522 MVFADKRFSRNDKRGKLPRWMQEYLE 547
>gi|123486053|ref|XP_001324631.1| helicase [Trichomonas vaginalis G3]
gi|121907517|gb|EAY12408.1| helicase, putative [Trichomonas vaginalis G3]
Length = 880
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 142/256 (55%), Gaps = 9/256 (3%)
Query: 8 GIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSF 66
GIDV+FPF Y Q M K + +L+ NALLESPTGTGKTL LL ++L ++ L S
Sbjct: 2 GIDVDFPFSTPYPAQKAIMAKTMVALKQSENALLESPTGTGKTLSLLASSLGYQTWLQSQ 61
Query: 67 STLGSQVNN--QISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS--NYRPK 122
+ + + G + + ++ + + YTSRTH+QL QV+ ELK YRPK
Sbjct: 62 KPEPPKKIDPAALYGEKYTELDPETEEEPQLKVYYTSRTHNQLSQVVSELKRKLPTYRPK 121
Query: 123 MVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEP 182
M IL SR+QLCI+ V + ACR + GT C + P
Sbjct: 122 MAILASRQQLCINDNVR--NKPDIDAACRL--EHGTKHNCEFGKSMTIPRSMMPDGEYSK 177
Query: 183 IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
DIE+L+++ R CPYF+TR L K + + APYNY++D R + +E NS++IFDE
Sbjct: 178 YDIENLIDVCREEVKCPYFVTRNLAKRAEFILAPYNYILDGRIRGTMKIELANSVVIFDE 237
Query: 243 AHNLEGICADAASFDL 258
HN+EGIC DAAS L
Sbjct: 238 GHNIEGICRDAASLSL 253
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 24/332 (7%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
L C +PG+A + + S+I+TSGTLSP+ + EL+ F ++ HVI Q+
Sbjct: 409 LELLCMSPGVAFRSIV-AKTHSVIITSGTLSPLTQYESELRTKFTHQLSAKHVIDPSQVL 467
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
+ I+ G L S+ ++ ++ YK+ LG+ ++ I + VPDG+L+FFPS M +C+
Sbjct: 468 SMIIQ-RMDGVELTSTAKSLNNNIYKK-LGDIVLTIVQKVPDGILLFFPSGSTMRKCLEI 525
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPL---AIEDYMAKLKDTSTSGAVFFAVC 592
W++ S ++E + KPV + A ++Y + + G + +VC
Sbjct: 526 WRSES-----LLYE--IQKFKPVFNENSGNKKKGEGDAFKEYRSSI--NKGKGGLLISVC 576
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RG+VSEG DFAD R V+I G+P+ ++ P++ LKR Y D A+ + E+ +
Sbjct: 577 RGRVSEGTDFADRQARCVIIFGIPYPSLYAPEIILKRNYNDDHAKQKNVEFATS-----D 631
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ--CYS 710
G +WY+ QA RA++QAVGR IRH+ DYG+II D RF +S+ W+Q ++ +
Sbjct: 632 GSEWYSAQAFRALSQAVGRCIRHKDDYGSIIMIDSRFMQ--ERSKFPRWMQDGLKRNPIT 689
Query: 711 KFGDVVYTLTRFFREERICGSTNLKLIKTEVS 742
++ L F+++ + + ++I+TE++
Sbjct: 690 SLSELGGQLANFYQDMTMRFPNSAQIIETEIN 721
>gi|300123500|emb|CBK24772.2| unnamed protein product [Blastocystis hominis]
Length = 280
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 142/259 (54%), Gaps = 15/259 (5%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLA---- 58
++ G+ V+FPF YD Q YM VI S+QN+ NA+LESPTGTGKTL LLC+ LA
Sbjct: 14 SFDYNGVSVQFPFPPYDIQKDYMRMVIDSIQNRKNAMLESPTGTGKTLSLLCSALAAIDF 73
Query: 59 ---------WRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQ 109
+ L + T S + G ++ S D ++Y SRTH+Q++Q
Sbjct: 74 RMTSYIPKQYADHLKNIETSNSISDKVAKGMARKISPISSADVAGRKLIYCSRTHTQIKQ 133
Query: 110 VIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVA 169
+++E+K + YRPK+++L SR+Q+CI+++V L AQ C FL R + ++
Sbjct: 134 IVREIKKTVYRPKLMVLASRDQMCINQDVRGLPQYAQRATCHFLGLTCPYHRNVNGDIIS 193
Query: 170 DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV--DIVFAPYNYLIDPWFRK 227
D P E +DIEDL GR CPY++ R + +++ PYNY++D R
Sbjct: 194 DLFHVQPPRERELMDIEDLYAYGRRRNVCPYYIARHEVSMIESELLLMPYNYIMDYHIRS 253
Query: 228 GLGVEWKNSILIFDEAHNL 246
L ++ + ++I DEAHN+
Sbjct: 254 RLNLDLQECVVIVDEAHNI 272
>gi|393910719|gb|EJD76012.1| Ercc2 protein [Loa loa]
Length = 705
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 172/719 (23%), Positives = 304/719 (42%), Gaps = 131/719 (18%)
Query: 43 PTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
P+GTGKT+ LL +A+ L ++Y SR
Sbjct: 2 PSGTGKTVSLLSLVVAYMLRF---------------------------PDHLDKLVYCSR 34
Query: 103 THSQLRQVIQELKT-------SNYRPK---MVILGSREQLCIHREVSLLR-GSAQNNACR 151
T ++ + ++EL+ + +P V L +R+ LCI+ VS LR GS + AC+
Sbjct: 35 TIPEIEKCVEELRNLFKYYEQCDGKPPSLFAVALSARKNLCINESVSSLRQGSLVDGACQ 94
Query: 152 FLCKKGTNRR--------CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMT 203
L + C D ++ HL D ++++L +G+ G CPYF++
Sbjct: 95 KLTASFVRAKRKLRPDLPCCTFFEKLDEQEDFNHL-DGVYNLQNLRKLGQQNGICPYFLS 153
Query: 204 RELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGL 262
R + IV Y+Y++DP + + + ++S ++FDEAHN++ +C ++ +S L
Sbjct: 154 RNVVDRAHIVVYSYHYILDPKIAELVSKNFSRHSCVVFDEAHNIDNVCIES----MSVSL 209
Query: 263 LTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKEL---- 318
+ +A + I + +E N + + L++ KR+ E N + L
Sbjct: 210 TKTTVEKATQKLGILEEHVQRLREE--NSEQLRVEYDRLVEGLKRVEEERTNDQVLANPV 267
Query: 319 -----------GFTKPGPYIYELLADLN--ITQETAYKLIDIVEVAAELLQEDKLQ--NK 363
G + + L N + K + I AA L + L ++
Sbjct: 268 LPDMILKEAVPGTIRNALHFISFLRRFNEYLKHRMRTKTVLIENPAAFLRDINDLMHIDR 327
Query: 364 KSTTAC--RIESISNILK----------IIFRDKGTAHSAYYR---VHVREADANAADVL 408
+ C R S++ L+ ++ + T S Y R + + D +
Sbjct: 328 RPLRFCAERFASLTRTLELADISDFSSLVLITNFATLVSTYARGFTIVIEPLDEKSGI-- 385
Query: 409 KGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPH 467
S TL C + +A++ F R ++++TSGTLSP+D + + L + +
Sbjct: 386 --GHSCTLHLSCMDASVAIRPIFQRYR--TVVITSGTLSPLDMYPKILDFDPAVMASLSM 441
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
+ I IV G + S + +R+ + G+ ++ + +VPDG+++F P
Sbjct: 442 TLARPCIAPLIVSKGNDQVAMTSRFESREDAAVIRNYGSLVLELVSLVPDGVVVFLPG-- 499
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAV 587
I + + K+K +E + +A+E Y+ GAV
Sbjct: 500 -------------------IIDELLKYKLLFIETTDALETSIALEKYVEACD--CGRGAV 538
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
FF+V RGKVSEG+DF+ H GRAV++ G+P+ +R + EYL + Q G
Sbjct: 539 FFSVARGKVSEGIDFSHHLGRAVIMLGVPYVYTESRILRARLEYL----REQLG------ 588
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q +GR +R + DYG +IF D+RF+ + ++ WIQ +I
Sbjct: 589 ---IRENDFLTFDAMRQAAQCMGRALRGKSDYGLMIFADKRFSRKDKMGKLPRWIQEYI 644
>gi|157870391|ref|XP_001683746.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
gi|68126812|emb|CAJ05417.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
Length = 813
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 186/780 (23%), Positives = 341/780 (43%), Gaps = 113/780 (14%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ + V FP+E Y QL Y+ ++ + L + +LE P+GTGKT+ LL +A+
Sbjct: 5 VEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQ--ELKTSNYRP- 121
+++ + V ++ T+ +T ++R++++ E + RP
Sbjct: 60 --------LHHHAHEKRKVVYCTR-------TVEEMVKTMGEMRKLLKHWEAEGEQLRPL 104
Query: 122 KMVILGSREQLCIHREV-SLLRGSAQNNACRFLCKK-GTNRRCNHHSRVADYMKNNPHLG 179
+ + L +++ LCI V S + + CR + RRC ++ +A P G
Sbjct: 105 RGLCLSAKKNLCIETSVASRIHPDEVDAGCRSITAPWQQERRCGYYDTLAQAPLELPP-G 163
Query: 180 DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW--KNSI 237
+D DL + G CPY++ R+ VDI+ Y Y++DP + + E+ +N+I
Sbjct: 164 VHSLD--DLKDFGEQHHVCPYYLVRKALPIVDIIVHSYLYMVDPVVSE-VTKEFLNENTI 220
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDIS-------STRRGQSSDETLN 290
++ DE HN++ +C +A S L+ + +N D++ +T R Q +E
Sbjct: 221 VVMDEGHNVDDVCIEAMSLILTK---KDSLDAKENMKDLNKELDHLKATNRQQLQNEYDR 277
Query: 291 PDNFAILRALLLKLEKRI----AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLID 346
N + + E+R +P N E LA + + ++++
Sbjct: 278 LVNGLAMAEMARDPEQRALVEAPAIPANVAEGAIPASLRQANHFLAFMQRLVDFTHRIVA 337
Query: 347 IVE---VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR--------- 394
+ VA L KL+ + + +S LK++ A++ YR
Sbjct: 338 RITRTYVADPLTFLTKLKEECALEISHFRYLSGRLKVLLTTLQIANAGKYRPVALIAQMY 397
Query: 395 -----------------VHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVG 436
V V EA + RT+ C + +A+++ F+R
Sbjct: 398 TLLSMHYTDDRYEKPGFVVVCEAFDPTRPQIPDPVIRTV---CVDASLALRDTFARHR-- 452
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVP-----VGPSGYLLNSS 491
S+ILTSGTLSPMD + + L + ++ K I IV V + + SS
Sbjct: 453 SVILTSGTLSPMDIYPKILGFTPAISKSFQMTLSRKCIAPVIVTRSSESVNITAEEVTSS 512
Query: 492 YRNRDSIEYKQELGNT----IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTI 547
++ R + + + + ++ +A+ VPDG++ FF Y M + + W ++
Sbjct: 513 FKVRTNPTAQALVTSAYESLLLELAKTVPDGMVCFFTGYQYMGEVLLAWHSSG------F 566
Query: 548 WERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
+++ KHK VE + +A+ +Y + D GA+F ++ RGK++EG+DF H G
Sbjct: 567 LQKLAKHKLIFVETQGVEETSVALANY-RRACDIG-RGAIFMSIARGKIAEGIDFDRHYG 624
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
RAVV+ G+PF D +R + ++++ E++ N A R +Q
Sbjct: 625 RAVVMFGVPFLPPNDEPLRQRMHWMEVCLGISESEFR-------------NFDAMRQASQ 671
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFG-DVVYTLTR-FFRE 725
+GRV+R++ DYG ++ D+RFA + +I WI ++ + D + R FF+E
Sbjct: 672 CIGRVLRNKTDYGMMLLVDKRFALNDKVKKIPRWIAQCLKNNTNLSVDAAVAVARGFFKE 731
>gi|349581808|dbj|GAA26965.1| K7_Chl1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 861
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 176/690 (25%), Positives = 301/690 (43%), Gaps = 74/690 (10%)
Query: 68 TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-----------KT 116
TL +++ ++S ++ + + I Y SRT+SQL Q +L K
Sbjct: 204 TLLDKIDGKVSRDPNNGDRFDVTNQNPVKIYYASRTYSQLGQFTSQLRLPSFPSSFRDKV 263
Query: 117 SNYRPKMVILGSREQLCIHREVSLLRG-SAQNNACRFL--CKKGTN--RRCNHHSRVADY 171
N + K + L S++QLCI+ +V + A N+AC L K+G + N D
Sbjct: 264 PNEKVKYLPLASKKQLCINPKVMKWKTLEAINDACADLRHSKEGCMFYQNTNEWRHCPDT 323
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ + E DIEDLV +G++ G CPY+ +RE ++V PY YL+ R L +
Sbjct: 324 LALRDMIFSEIQDIEDLVPLGKSLGICPYYASREALPIAEVVTLPYQYLLSESTRSSLQI 383
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSDETL 289
+NSI+I DEAHNL S +S + + KNC ++ + +S
Sbjct: 384 NLENSIVIIDEAHNLIETINSIYSSQIS-------LEDLKNCHKGIVTYFNKFKSRLNPG 436
Query: 290 NPDNFAILRALLLKLEKRIA--------EVPINSKELGFTKPGPYIYELLADLNITQETA 341
N N L +LL+ L + I E+ N G I++LL + +++ A
Sbjct: 437 NRVNLLKLNSLLMALIQFIVKNFKKIGQEIDPNDMFTGSNIDTLNIHKLLRYIKVSK-IA 495
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREAD 401
YK ID A L +E+ +N+ +S+S+ ++F+ + +
Sbjct: 496 YK-IDTYNQA--LKEEESSKNENPIKETHKKSVSS-QPLLFKVSQFLYCL--------TN 543
Query: 402 ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
+ + + ++ + P + + ++L GT+ PM F L P
Sbjct: 544 LTSEGQFFFEKNYSIKYMLLEPSKPFESILN-QAKCVVLAGGTMEPMSEFLSNLLPEVPS 602
Query: 462 R----VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY-KQELGNTIVNIARIVP 516
+ + HVI + + I P L ++ R S L V++++ VP
Sbjct: 603 KDITTLSCNHVIPKENLQTYITN-QPE---LEFTFEKRMSPSLVNNHLFQFFVDLSKAVP 658
Query: 517 D--GLLIFFPSYYLMDQCIACWK-NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
G++ FFPSY + I CWK N L + +K E + D
Sbjct: 659 KKGGIVAFFPSYQYLAHVIQCWKQNDRFATLNNV-------RKIFYEAKDGDDILSGYSD 711
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
+A+ + G++ A+ GK+SEG++F D RAVV+ G+PF + ++ +KR++L
Sbjct: 712 SVAEGR-----GSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGELIVKRKHLA 766
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ GG +E + +++ +AVNQ+VGR IRH +DY I D R+ P+
Sbjct: 767 AKIMKSGGTEEEASRA---TKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPN 823
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ ++S W+Q I V+ + +FF
Sbjct: 824 FRKKLSRWVQDSINSEHTTHQVISSTRKFF 853
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSL-QNKCNALLESPTGTGKTLCLLCATLAW 59
P++ YD Q+ ME V + L + K A+LESPTGTGKTL L+CAT+ W
Sbjct: 13 PYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTW 59
>gi|206558290|sp|A6ZWN8.1|CHL1_YEAS7 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|151942784|gb|EDN61130.1| DEAH box protein [Saccharomyces cerevisiae YJM789]
Length = 861
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 176/690 (25%), Positives = 301/690 (43%), Gaps = 74/690 (10%)
Query: 68 TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-----------KT 116
TL +++ ++S ++ + + I Y SRT+SQL Q +L K
Sbjct: 204 TLLDKIDGKVSRDPNNGDRFDVTNQNPVKIYYASRTYSQLGQFTSQLRLPSFPSSFRDKV 263
Query: 117 SNYRPKMVILGSREQLCIHREVSLLRG-SAQNNACRFL--CKKGTN--RRCNHHSRVADY 171
N + K + L S++QLCI+ +V + A N+AC L K+G + N D
Sbjct: 264 PNEKVKYLPLASKKQLCINPKVMKWKTLEAINDACADLRHSKEGCMFYQNTNEWRHCPDT 323
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ + E DIEDLV +G++ G CPY+ +RE ++V PY YL+ R L +
Sbjct: 324 LALRDMIFSEIQDIEDLVPLGKSLGICPYYASREALPIAEVVTLPYQYLLSESTRSSLQI 383
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSDETL 289
+NSI+I DEAHNL S +S + + KNC ++ + +S
Sbjct: 384 NLENSIVIIDEAHNLIETINSIYSSQIS-------LEDLKNCHKGIVTYFNKFKSRLNPG 436
Query: 290 NPDNFAILRALLLKLEKRIA--------EVPINSKELGFTKPGPYIYELLADLNITQETA 341
N N L +LL+ L + I E+ N G I++LL + +++ A
Sbjct: 437 NRVNLLKLNSLLMTLIQFIVKNFKKIGQEIDPNDMFTGSNIDTLNIHKLLRYIKVSK-IA 495
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREAD 401
YK ID A L +E+ +N+ +S+S+ ++F+ + +
Sbjct: 496 YK-IDTYNQA--LKEEESSKNENPIKETHKKSVSS-QPLLFKVSQFLYCL--------TN 543
Query: 402 ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL 461
+ + + ++ + P + + ++L GT+ PM F L P
Sbjct: 544 LTSEGQFFFEKNYSIKYMLLEPSKPFESILN-QAKCVVLAGGTMEPMSEFLSNLLPEVPS 602
Query: 462 R----VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY-KQELGNTIVNIARIVP 516
+ + HVI + + I P L ++ R S L V++++ VP
Sbjct: 603 KDITTLSCNHVIPKENLQTYITN-QPE---LEFTFEKRMSPSLVNNHLFQFFVDLSKAVP 658
Query: 517 D--GLLIFFPSYYLMDQCIACWK-NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
G++ FFPSY + I CWK N L + +K E + D
Sbjct: 659 KKGGIVAFFPSYQYLAHVIQCWKQNDRFATLNNV-------RKIFYEAKDGDDILSGYSD 711
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
+A+ + G++ A+ GK+SEG++F D RAVV+ G+PF + ++ +KR++L
Sbjct: 712 SVAEGR-----GSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGELIVKRKHLA 766
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ GG +E + +++ +AVNQ+VGR IRH +DY I D R+ P+
Sbjct: 767 AKIMKSGGTEEEASRA---TKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPN 823
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ ++S W+Q I V+ + +FF
Sbjct: 824 FRKKLSRWVQDSINSEHTTHQVISSTRKFF 853
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSL-QNKCNALLESPTGTGKTLCLLCATLAW 59
P++ YD Q+ ME V + L + K A+LESPTGTGKTL L+CAT+ W
Sbjct: 13 PYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTW 59
>gi|449328753|gb|AGE95029.1| ATP dependent DNA binding helicase [Encephalitozoon cuniculi]
Length = 619
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 182/720 (25%), Positives = 298/720 (41%), Gaps = 115/720 (15%)
Query: 16 EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNN 75
E YD Q + + + + + SPTGTGKT+ LL A + + +G+ N
Sbjct: 5 ELYDVQKLLIRDARRVIDEGTAGIFSSPTGTGKTMSLLSAVIDY---IGADEAGLDPRNR 61
Query: 76 QISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIH 135
+ + Q G K +LY +RTH+QL Q I ELK V+LGSR C++
Sbjct: 62 ALEQALF-----QGGRMK---VLYCTRTHTQLTQAINELKKLEAGCNSVVLGSRRIYCLN 113
Query: 136 REVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRT 194
V R S A N C+ K+G Y + G +D+EDLV +GR
Sbjct: 114 ERVCQNRSSDAVNEGCKEAVKEGL---------CVFYDGCDLFDGHGVLDVEDLVAMGRN 164
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY++++ + DIVF PY L RK +G++ + SI++ DEAHN+
Sbjct: 165 ERLCPYYVSKRYSQQCDIVFLPYQLLFTREGRKSMGIDVRESIVVVDEAHNI-------- 216
Query: 255 SFDLSSGLLTACI--SEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
+D + TACI S CI R + + +L +++ E
Sbjct: 217 -YDSVVQMNTACILFSTMNRCIKAMQLYRERHGRRMKREGQLETVVEILRRIKGFGDEY- 274
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE 372
++G + + E L I ++ D + V + + + +L+ S + +I
Sbjct: 275 --CGDVGEGEGVMGVSEFLLKAGIEDFNMLEVEDYI-VTSGIFR--RLEGFGSNPSLQIP 329
Query: 373 SISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSR 432
IS L ++ + Y VR F P A F
Sbjct: 330 EISKFLGLLTVSDRSGRIFYSSRGVR----------------------FTPLDASMYFED 367
Query: 433 -LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
LE +++L GT+ P+D L P + A ++ GPSG + +
Sbjct: 368 VLECRALLLAGGTMEPVDQLMSVLGKKSPRYFSYGSI--CNDFLALVMGSGPSGREIIVN 425
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPD-GLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
+ R+ E +++ ++I N++ V D G++ F P S L + ER
Sbjct: 426 FETRERPESIKDVTSSISNLSNAVKDGGMVCFLP---------------SKAYLGILRER 470
Query: 551 ---ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
+ KK + E + E Y ++ + FAV G++SEG++F D
Sbjct: 471 CGDMVGTKKALYED------LITFEGYA---EEAGRGPCILFAVMGGRLSEGVNFGDGLC 521
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
R +V+ G+P+ T + LK +A+ GGEY + A R VNQ
Sbjct: 522 RLLVVVGVPYPT---QDLELKE-----RAKFNGGEYATSI-------------AMRTVNQ 560
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+GR +RHR+DY ++ D+R+ SR +S WI+ + + FG ++ +RF +R
Sbjct: 561 TLGRALRHRNDYAVLVLLDKRYIQLSR--LVSPWIREKV-VHCDFGSGLFRASRFLGRDR 617
>gi|294879226|ref|XP_002768609.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983]
gi|239871280|gb|EER01327.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983]
Length = 887
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 208/861 (24%), Positives = 346/861 (40%), Gaps = 224/861 (26%)
Query: 1 MPTYKIRGIDVEFPFEA-YDCQLVYMEKVIQSLQ-NKCNALLESPTGTGKTLCLLCATLA 58
+P I G+ V FP++A Y Q+ YM + Q+L + L+E PTGTGKT+ ++
Sbjct: 3 IPNLNIDGLRVLFPYDAIYPEQVQYMHYLKQALDASHGQGLIEMPTGTGKTVTIM----- 57
Query: 59 WRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TS 117
S + S Q ++ ++Y +RT ++ Q I+ELK
Sbjct: 58 -----------------------SLITSYQLSHPQMGKLVYCTRTVPEMNQAIRELKLVI 94
Query: 118 NYRPKMVI---------------LGSREQLCIHREVS----------------------- 139
YR +++ L +R +CIH +V+
Sbjct: 95 EYRERVLASEKPDEAPQKFLGIGLSARRNMCIHPDVANQADRDKIDIKCREMTSNFLNKK 154
Query: 140 ------LLRGSAQNNACR---------------FL-CK-----------KGTNRRCNHHS 166
L G ++ N+ R FL C+ G +R N+ S
Sbjct: 155 SNRFSQLSSGVSKANSGRNVQKPIEISQKFSQNFLTCRCSFFEQYDELIGGVGKRYNNDS 214
Query: 167 RVA-DYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
A + K + +EDL G G CPY+M++ L + D++ Y Y++DP
Sbjct: 215 ESASNEEKKKFAIPSGVYTLEDLRVAGGAEGWCPYYMSKRLLRHADVIVFNYQYVLDPRV 274
Query: 226 RK----------------------------GLGV-------EWKNSILIFDEAHNLEGIC 250
LGV +++ +++IFDEAHN++ IC
Sbjct: 275 SASALIAGEASGRGVMTHGALAKEGEERPAALGVDNNDDDQQFEPAVVIFDEAHNIDDIC 334
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISST--RRGQSSDETLNPDNFAILRALLLKLEKRI 308
DA LT + + ID +S+ +R Q L + A L+A + L + +
Sbjct: 335 MDA---------LTVTVD--RKTIDRASSNVKRLQHEVTQLKKVDEARLKAEVENLMRGL 383
Query: 309 AEVPINSKE---LGFTKPGPY--------IYELLADLNITQET--------------AYK 343
A S+E + + GP + L+ N+ Q AY
Sbjct: 384 APASGMSEEDESISALRFGPNELKKAVSGVSHLVIPGNVRQAEHFLGVLQQVCAFLRAYI 443
Query: 344 LIDIVEVAAELLQEDKLQNKKSTTA-------CRIESISNILKIIFRDK----------- 385
+D L+ +L++++ A R+ S+ N LKI D+
Sbjct: 444 RVDKARAEGPLMFLHELESQQFIEARTMKAFDARLRSLMNTLKITDIDEFSPLTKICDLC 503
Query: 386 --GTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVG-SIILTS 442
+ HS + V A+V + + N A+ SR E+ S++LTS
Sbjct: 504 TLASLHSKGFAVLTDPCPE--AEVSQPVLREVAQYLVKNVKFAI--CSRREICFSLVLTS 559
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQ 502
GTLSP+ +++ L L+ + E + + ++ + +L+SS+++R E +
Sbjct: 560 GTLSPLSMYSKLLGLDRVVVSEALDISLERDCIRPLIVTRSNDVVLSSSFQSRKDEEVSK 619
Query: 503 ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR 562
G + + ++VPDG++ FF S M Q + W ++ G L R+ HK E
Sbjct: 620 CYGTLLEELVQVVPDGVVCFFTSKVFMQQVVRTWYDS--GTLA----RLSTHKVVFFETD 673
Query: 563 QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTD 622
+A+ +Y G +F AV RGKVSEG+DF H GRAVV+ G+PF
Sbjct: 674 DVVSTTIALSNYREACD--QGRGGLFLAVARGKVSEGIDFDRHYGRAVVLFGVPFQYSLS 731
Query: 623 PKVRLKREYL-DLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
++R + Y+ D S+G FL+ + A RA Q VGRV+R + DYG
Sbjct: 732 RRLRARLAYIRDTHGISEG--------EFLTFD------AMRAAAQCVGRVLRSKQDYGL 777
Query: 682 IIFCDERFAHPSRKSQISLWI 702
++ D R+A ++ ++ WI
Sbjct: 778 MVLADARYARADKRKKLPPWI 798
>gi|19173439|ref|NP_597242.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
gi|19171028|emb|CAD26418.1| ATP DEPENDENT DNA BINDING HELICASE (RAD3/XPD SUBFAMILY OF
HELICASES) [Encephalitozoon cuniculi GB-M1]
Length = 619
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 183/720 (25%), Positives = 298/720 (41%), Gaps = 115/720 (15%)
Query: 16 EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNN 75
E YD Q + + + + + SPTGTGKT+ LL A + + +G+ N
Sbjct: 5 ELYDVQKLLIRDARRVIDEGTAGIFSSPTGTGKTMSLLSAVIDY---IGADEAGLDPRNR 61
Query: 76 QISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIH 135
+ + Q G K +LY +RTH+QL Q I ELK V+LGSR C++
Sbjct: 62 ALEQALF-----QGGRMK---VLYCTRTHTQLTQAINELKKLEAGCNSVVLGSRRIYCLN 113
Query: 136 REVSLLRGS-AQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRT 194
V R S A N C+ K+G Y + G +D+EDLV +GR
Sbjct: 114 ERVCQNRSSDAVNEGCKEAVKEGL---------CVFYDGCDLFDGHGVLDVEDLVAMGRN 164
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY++++ + DIVF PY L RK + ++ + SI++ DEAHN+
Sbjct: 165 ERLCPYYVSKRYSQQCDIVFLPYQLLFAREGRKSMDIDVRESIVVVDEAHNI-------- 216
Query: 255 SFDLSSGLLTACI--SEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVP 312
+D + TACI S CI R + + +L +++ E
Sbjct: 217 -YDSVVQMNTACILFSTMNRCIKAMQLYRERHGRRMKREGQLETVVEILRRIKGFGDEY- 274
Query: 313 INSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE 372
+++G + + E L I ++ D + V + + + +L+ S + +I
Sbjct: 275 --CEDVGEGEGVMGVSEFLLKAGIEDFNMLEVEDYI-VTSGIFR--RLEGFGSNPSLQIP 329
Query: 373 SISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSR 432
IS L ++ + Y VR F P A F
Sbjct: 330 EISKFLGLLTVSDRSGRIFYSSRGVR----------------------FTPLDASMYFED 367
Query: 433 -LEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
LE +++L GT+ P+D L P V A +V GPSG + +
Sbjct: 368 VLECRALLLAGGTMEPVDQLMSVLGKKSPRYFSYGSV--CNDFLALVVGSGPSGREIIVN 425
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPD-GLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER 550
+ R+ E +++ ++I N++ V D G++ F P S L + ER
Sbjct: 426 FETRERPESIKDVTSSISNLSNAVKDGGMVCFLP---------------SKAYLGILRER 470
Query: 551 ---ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
+ KK + E + E Y ++ + FAV G++SEG++F D
Sbjct: 471 CGDMVGTKKALYED------LITFEGYA---EEAGRGPCILFAVMGGRLSEGVNFGDGLC 521
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
R +V+ G+P+ T + LK +A+ GGEY + A R VNQ
Sbjct: 522 RLLVVVGVPYPT---QDLELKE-----RAKFNGGEYATSI-------------AMRTVNQ 560
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+GR +RHR+DY ++ D+R+ SR +S WI+ + + FG ++ +RF +R
Sbjct: 561 TLGRALRHRNDYAVLVLLDKRYIQLSR--LVSPWIREKV-VHCDFGSGLFRASRFLGRDR 617
>gi|154338549|ref|XP_001565499.1| putative TFIIH basal transcription factor complex helicase subunit
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062548|emb|CAM42411.1| putative TFIIH basal transcription factor complex helicase subunit
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 813
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 176/762 (23%), Positives = 332/762 (43%), Gaps = 116/762 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ + V FP+E Y QL Y+ ++ + L + +LE P+GTGKT+ LL +A+
Sbjct: 5 VEDVLVVFPYEYIYPEQLDYITELKRGLDKGGHMVLEMPSGTGKTISLLSILVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQ--ELKTSNYRP- 121
+++ + V +++ + + +T ++R++++ E + RP
Sbjct: 60 --------LHHHAHEKRKVVYCTRTVEEMV-------KTMGEMRKLLKHWEAEGEQLRPL 104
Query: 122 KMVILGSREQLCIHREV-SLLRGSAQNNACRFLCKKGTNR-RCNHHSRVADYMKNNP-HL 178
+ + L +++ LCI V SL+ + CR + RC ++ D + P L
Sbjct: 105 RGLCLTAKKNLCIEPSVTSLIHPDKVDAGCRSITAPWQQEGRCGYY----DTLIQGPLEL 160
Query: 179 GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSI 237
++DL + G CPY++ R+ VDI+ Y Y++DP + +N+I
Sbjct: 161 PPGVYSLDDLKDFGEQHHVCPYYLVRKALPIVDIIVHSYLYMVDPVVSEVTKAFLNENTI 220
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDIS-------STRRGQSSDETLN 290
++ DE HN++ +C +A S L+ + +N D++ +T R Q DE
Sbjct: 221 VVMDEGHNVDDVCIEAMSLILTK---KDSLDAKQNMKDLNKELDHLKATNRQQLQDEYDR 277
Query: 291 PDNFAILRALLLKLEKR----IAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLID 346
N + + E+R + +P N E L + + ++++
Sbjct: 278 LVNGLAMAEMARIPEERAVVVVPAIPANVAEGAIPASLRQANHFLVFMQRLVDFTHRIVA 337
Query: 347 IVE---VAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYR--------- 394
+ VA L KL+ + + +S LK++ ++ YR
Sbjct: 338 RITRTYVADPLTFLTKLKEECALEISHFRYLSERLKVLLTTLQVTNTGKYRPVALIAQMY 397
Query: 395 -----------------VHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVG 436
V V EA + RT+ C + +A+++ F R
Sbjct: 398 TLLSMYYTDDRYEKPGFVVVCEAFDPTRPQIPDPVIRTV---CVDASLALRDTFGRYR-- 452
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIV------PVGPSGYLLNS 490
S+ILTSGTLSPMD + + L P ++ + S++ A ++ V + + S
Sbjct: 453 SVILTSGTLSPMDIYPKILGFA-PAVSKSFQMTLSRKCIAPVIVTRSSESVSITAEEVTS 511
Query: 491 SYRNRDSIEYKQELGNT----IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
S++ R + + + + + +A+ VPDG++ FF Y M + + W ++
Sbjct: 512 SFKVRTNPAAQALVTSAYESLLFELAKTVPDGMVCFFTGYQYMGEVLLAWHSSG------ 565
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
+++ KHK VE + +A+ +Y + GA+F ++ RGK++EG+DF H
Sbjct: 566 FLQKLAKHKLIFVETQGVEETSVALANY--RRACDIGRGAIFMSIARGKIAEGIDFDRHY 623
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GRAV++ G+PF D +R + ++++ E++ N A R +
Sbjct: 624 GRAVIMFGVPFLPPNDEPLRQRMHWMEVCLGISESEFR-------------NFDAMRQAS 670
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
Q +GRV+R++ DYG ++ D+RFA + ++I WI +QC
Sbjct: 671 QCIGRVLRNKTDYGMMLLVDKRFALNDKCNKIPRWI---VQC 709
>gi|452840275|gb|EME42213.1| hypothetical protein DOTSEDRAFT_81172 [Dothistroma septosporum
NZE10]
Length = 836
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 178/683 (26%), Positives = 299/683 (43%), Gaps = 99/683 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--------------------KMVILGSREQLCIHR 136
+ + SRTHSQL Q + EL+ P K + GSR+ LCI+
Sbjct: 194 VFFCSRTHSQLSQFVGELRRVRMPPALPSEKTDGRDDSEQSTEQLKHLTFGSRKNLCINS 253
Query: 137 EVSLLRGS-AQNNACRFLCK-KGTNRRCNH---HSRVADYMKNNPHLGDEPIDIEDLVNI 191
+V+ L A N C L + K +C + A ++ H + DIEDL +
Sbjct: 254 KVNQLSSQVAINERCIELQQAKTVETKCPYMPTKDNEAQVLEFRDHALAKIRDIEDLAQL 313
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G CPY+ +R +IV PY L+ R+ LG+ K ++I DEAHNL
Sbjct: 314 GAKREICPYYASRPAVGPAEIVTLPYPLLLQKSAREALGISVKGHVVIIDEAHNL----M 369
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTR---RGQSSDETLNPDNFAILRALLLKLEKRI 308
+A S+ + + A++ + R R + S+ + ++ ALL + R+
Sbjct: 370 NAVESTYSAQISDLQLKRARDALIAYLQRFRHRLKGSNRSYVTQVVRVVDALL-QFATRM 428
Query: 309 AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIV---EVAAELLQEDKLQNKKS 365
+ +N G P LLA + Q KL+ + +A ++ K
Sbjct: 429 RQGNVNG---GTISPSA----LLAGKGVDQINLAKLVRYINDSRLARKVEGYVKFVATIE 481
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
R ++ SN D+G HV+ + + R L W G+
Sbjct: 482 AEQTRSQTKSN-------DRGEVVDVPTLTHVQNFLLTLMN--PSREGRFL-WSKMEDGV 531
Query: 426 AMQ--------EFSRL--EVGSIILTSGTLSPMDSFAQELKLNFPL-----RVENPHVIT 470
A+Q F + + S+IL GT+SPMD + Q+L FP H+I
Sbjct: 532 ALQYLLLDPSEHFREIVEDARSVILAGGTMSPMDDYRQQL---FPYLHSIQTFSCDHLIP 588
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
++ + G + + S++ R+ + LGN+I+ I+R V G+++FFPSY ++
Sbjct: 589 PSSLFVRAISSDEYGRI-DFSFKARNDTSAVR-LGNSILQISRKVKGGMVVFFPSYGYLE 646
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS---GAV 587
+ ++ W + I R+ K ++ R ++ ED +T + GAV
Sbjct: 647 KVLSIWASQK------IKSRLEGLKALFLDGR-----AMSAEDTFRAYSETIANDPRGAV 695
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
+V GK+SEG++F+D+ GR VV+ G+P+ + P+ K +YLD +A +G E K
Sbjct: 696 LLSVIGGKLSEGINFSDNLGRCVVVVGLPYPNLETPEWIAKMQYLDDKAACRG----EAK 751
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+ + R+VNQA+GR IRH++D+ +I+ D R+A ++++ WI+
Sbjct: 752 GK--ASREHAENVCMRSVNQAIGRAIRHKNDWASILLFDARYAEGRVQTKLPRWIK--TS 807
Query: 708 CYSK----FGDVVYTLTRFFREE 726
C +K VV L FF ++
Sbjct: 808 CDAKVSGALAGVVADLGGFFEQK 830
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
PFE Y QL +M + ++ + ESPTGTGK+L LLCA+L W
Sbjct: 9 PFEPYSIQLDFMTAMYDCIEEGSVGIFESPTGTGKSLSLLCASLTW 54
>gi|348506178|ref|XP_003440637.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oreochromis niloticus]
Length = 897
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 167/325 (51%), Gaps = 28/325 (8%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
++ + NP + + + E ++I+ GT+ P+ F QEL + + E HV
Sbjct: 585 SVKFLLLNPAVHFAQVLK-ECRAVIIAGGTMQPVSDFKQELLFSAGVVEERVTEFSCGHV 643
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I + I ++ GPSG L +++NRD+ E G + NI +VP G++ FFPSY
Sbjct: 644 IPPENILPLVLCSGPSGQELEFTFQNRDTPRMMDETGRILSNICNVVPGGVVCFFPSYDY 703
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST----- 583
+ I+ W+ + G LT R+ KK EP++++ + ++ ++ S
Sbjct: 704 SRRIISHWETS--GTLT----RLANKKKIFQEPKKANQVEQVLNEFSRCIQRCSADCSGL 757
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ-AQSQGGE 642
+GA+ F+V GK+SEG++F+D GR VV+ GMP+ + P+++ K YLD SQG
Sbjct: 758 TGALLFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMSYLDRHLPHSQGRS 817
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
G+ +AVNQ++GR IRHR DY +I+ CD R++ P+ S++ WI
Sbjct: 818 ---------PGQALIENLCMKAVNQSIGRAIRHRGDYSSIVLCDRRYSRPATLSKLPTWI 868
Query: 703 QPHIQCYSKFGDVVYTLTRFFREER 727
+ + FG L +FF E++
Sbjct: 869 KDRTTTHMTFGPAFAALRKFFLEKK 893
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 103/230 (44%), Gaps = 30/230 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRGSAQ--NNAC-- 150
I Y SRTHSQL Q + E++ S + + V LGSR+ LCI+ EV L GS Q N+ C
Sbjct: 210 IYYCSRTHSQLAQFVHEVQKSPFSKDISVVTLGSRQNLCINEEVRRL-GSIQRINDRCME 268
Query: 151 ---------RFLCKKGTNRRCNHHSRVADYMKNNP--HLGDEPI----DIEDLVNIGRTF 195
F+ + G R+ V Y K + + D + DIE L+ +GR
Sbjct: 269 MQKNKHGERHFVEELGVKRKRGPAKSVCPYNKASALQQMRDVVLGAVHDIEQLLKLGRET 328
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ TR +V PY ++ R+ GV+ K +LI DEAHNL + S
Sbjct: 329 HSCPYYATRLAIPPAQLVVLPYQMVLHEATRRAAGVQLKGQVLIIDEAHNLSDTLSCIHS 388
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLE 305
+LS L S+ D +R L N ++ +L +E
Sbjct: 389 AELSGAQLCRAHSQLIQYADRYKSR--------LKAKNLMYIKQILFVIE 430
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y+ Q +M+ + +L + ESPTGTGK+L L+C L+W
Sbjct: 10 FPYQPYNIQEEFMQALYSALDKGKVGIFESPTGTGKSLSLICGALSW 56
>gi|158301911|ref|XP_321585.4| AGAP001537-PA [Anopheles gambiae str. PEST]
gi|157012699|gb|EAA01808.4| AGAP001537-PA [Anopheles gambiae str. PEST]
Length = 910
Score = 172 bits (437), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 190/377 (50%), Gaps = 32/377 (8%)
Query: 357 EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVR--EADANAADVLKGKASR 414
+ +LQ+K S T I + N L+ + D G S RV + E D + A
Sbjct: 552 DQQLQSKPSVTNA-IRPLINFLECLVEDAGGG-SGDSRVMISFDEKDLSQA--------- 600
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV---ENPHVITS 471
++ + NPG ++ + S++L GT+ P + +++ N RV PHV+
Sbjct: 601 SMKYLLLNPGGKFEDIVQ-SCRSVVLAGGTMQPTEELTEQVFRNCRERVTIKSYPHVVPK 659
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ + GP+G +Y N+ ++E EL +T++NI+++VP G+++FF SY +D
Sbjct: 660 DAVLPIALGRGPTGKDFLFNYNNKHNVEMLDELQSTLLNISQVVPHGVVVFFSSYDFLD- 718
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
+ K GN + ER KK EP+ S + +Y + S +GA+ F+V
Sbjct: 719 -LFTRKLEESGNRARLEER----KKVFREPKTSGQVEKTLSEYGRAAR--SATGAILFSV 771
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
GK+SEGL+F+D GR VV+ G+P+ T P++ + YLD +S G T +
Sbjct: 772 VGGKLSEGLNFSDQLGRCVVVVGLPYPNRTSPELCERMRYLD---RSLAG---ATSGASS 825
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR-KSQISLWIQPHIQCYS 710
+G ++Y +AVNQ +GR +RH DY A+I D R+ R + ++ +WI ++C
Sbjct: 826 AGNEYYENLCMKAVNQCIGRAVRHIRDYAAVILLDTRYCTGERIRRKLPVWISERMECAE 885
Query: 711 KFGDVVYTLTRFFREER 727
++G L +FFR+ +
Sbjct: 886 RYGQAHGKLVKFFRDHK 902
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 28/176 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ-NNACRFL 153
+++ SRTHSQL QV+ E+K + + +++ L SR+ LCI+ +V L+ S N C L
Sbjct: 203 VIFCSRTHSQLSQVVSEVKETEHSKDLRLMSLASRQSLCINADVRKLKSSTLINERCLEL 262
Query: 154 CKKGTNRRCN-----------------------HHSRVADYMKNNPHLGDEPIDIEDLVN 190
KG + + ++ R + +KN E DIEDLV
Sbjct: 263 LNKGGKNKASAGDEGDDGRSVKKRRKLTQSCPYYNQRAIEGLKNGILF--EVPDIEDLVK 320
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
G+ CPY+ +R ++ PY ++ R+ G+ +++ILI DEAHNL
Sbjct: 321 AGKREQACPYYASRAAIPDAQVLMVPYQLILHRRTRQQSGIRLQDAILIIDEAHNL 376
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 7 RGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
+G D FPF YD QL +M+ + + + + ESPTGTGK+L L C TL W K
Sbjct: 15 KGSDFAFPFLPYDIQLDFMKTLYTVIHSGGIGIFESPTGTGKSLSLTCGTLTWLK 69
>gi|209879600|ref|XP_002141240.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556846|gb|EEA06891.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 835
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 208/859 (24%), Positives = 338/859 (39%), Gaps = 216/859 (25%)
Query: 1 MPTYKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M + I ++V FP++ Y QL YM+ + Q L + +LE PTGTGKT+ L
Sbjct: 1 MVRFFIEEVEVFFPYDYVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLF------ 54
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS-N 118
S + S Q L ++Y +RT +++ + + ELKT N
Sbjct: 55 ----------------------SFITSYQLAHPNLGRLIYCTRTVAEMEKALLELKTVIN 92
Query: 119 YRPK------------------------------MVILGSREQLCIHREVSLLRGSAQNN 148
YR K + + +R LCI+ V ++ +
Sbjct: 93 YRIKELQKDKLALQETNNINISTSENQILNGSILAIGMSARRNLCINSSVI---SNSDRD 149
Query: 149 ACRFLCKKGTN--RRCNHHSRVADYMKNNPHLGDEPI--DIEDLVN-------------- 190
+C+ T R S D K+ + D+ DIED++
Sbjct: 150 KIDAMCRSMTAPWVRAKKSSTRLDNDKSGTQVIDQSSLQDIEDIIQGNCTDLCPYYEIFD 209
Query: 191 ---------IG-------RTFGP-------------CPYFMTRELQKTVDIVFAPYNYLI 221
IG R FG CPY+ T+ L + +V Y Y +
Sbjct: 210 KIWSSDTIPIGVYTIDELRRFGKEWEHPTLKKNTPFCPYYSTKRLIQVAKVVVLNYQYTL 269
Query: 222 DP--------------WFRKGLGVEWKN-------------------SILIFDEAHNLEG 248
DP F G + K SI++FDEAHN++
Sbjct: 270 DPKVAQASLLGGTVSQGFSHGSNINGKQAGSSYAAALDPELLGSKEPSIVVFDEAHNIDN 329
Query: 249 ICADAASFDLSSGLLTAC---ISEAKNCI----DISSTR---------RGQSSDETLNPD 292
IC +A S +++ +L + KN I +I R RG S + D
Sbjct: 330 ICTEALSVNINRQVLDGASRNLKSLKNEINKLTEIDEKRLQEEYNRLVRGLKSTGQIEDD 389
Query: 293 -------NFAILRALLLKLEKRIAEVPINSKE---LGFTKPGPYIYELLADLNITQETAY 342
F +L A + KL+K + I E L K Y+ + E
Sbjct: 390 LVLEELQRFPVLPAEVEKLKKELIPGSIRKAEHFLLIMKKITLYLQNYIRVFTPKIEGPL 449
Query: 343 KLIDIVEVAAELLQEDKLQNKKSTTAC--RIESISNILKIIFRDK----------GTAHS 390
++ +E + + + C R+ S+ N L+II D+ T
Sbjct: 450 TFLNHLESSCMI-------DVNIIRFCDERLRSLMNTLQIIDMDQYSPIELVCTFCTILG 502
Query: 391 AYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMD 449
Y + V D + G + C + IAM+ R + SI+LTSGTLSP+D
Sbjct: 503 TYSKGFVIIVDPYPE--VTGLYDPIIQLSCLDSSIAMKPILDRYQ--SIVLTSGTLSPLD 558
Query: 450 SFAQELKLNFPLRVENPHVITSKQ-IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTI 508
+ + L + P+ E+ + + I IV G L+S Y +R+ +Q G +
Sbjct: 559 LYPKLLGFD-PVVSESLSMTLDRTCICPMIVTRGSDQVPLSSRYESREDSIIQQNYGKLV 617
Query: 509 VNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFP 568
+ I++ VPDG++ FFPSY M+Q + W + I +I +HK VE +
Sbjct: 618 LEISKKVPDGIVCFFPSYLYMEQVLGQWYESG------ILAQIMEHKLVFVETKDIVSTT 671
Query: 569 LAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
LA+ + K D G +FF++ RGKV+EG+DF H GR V++ G+P+ ++ +
Sbjct: 672 LALHHF-RKACDIG-RGGIFFSIARGKVAEGIDFDRHYGRCVILVGIPYQYTLSRILQSR 729
Query: 629 REYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
+L + E+ L+F A R +Q VGR+IR + DYG +I D+R
Sbjct: 730 LSFLKENYNIEENEF----LTF---------DAMRQASQCVGRIIRSKADYGLMILADQR 776
Query: 689 FAHPSRKSQISLWIQPHIQ 707
++ ++ ++ WI +++
Sbjct: 777 YSKKDKREKLPPWILKYLK 795
>gi|190407937|gb|EDV11202.1| deah box protein [Saccharomyces cerevisiae RM11-1a]
Length = 861
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 176/690 (25%), Positives = 303/690 (43%), Gaps = 74/690 (10%)
Query: 68 TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT----SNYRPKM 123
TL +++ ++S ++ + + I Y SRT+SQL Q +L+ S++R K+
Sbjct: 204 TLLDKIDGKVSRDPNNGDRFDVTNQNPVKIYYASRTYSQLGQFTSQLRLPSFPSSFRDKV 263
Query: 124 -------VILGSREQLCIHREVSLLRG-SAQNNACRFL--CKKGTN--RRCNHHSRVADY 171
+ L S++QLCI+ +V + A N+AC L K+G + N D
Sbjct: 264 PDEKVKYLPLASKKQLCINPKVMKWKTLEAINDACADLRHSKEGCMFYQNTNEWRHCPDT 323
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ + E DIEDLV +G++ G CPY+ +RE ++V PY YL+ R L +
Sbjct: 324 LALRDMIFSEIQDIEDLVPLGKSLGICPYYASREALPIAEVVTLPYQYLLSESTRSSLQI 383
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSDETL 289
+NSI+I DEAHNL S +S + + KNC ++ + +S
Sbjct: 384 NLENSIVIIDEAHNLIETINSIYSSQIS-------LEDLKNCHKGIVTYFNKFKSRLNPG 436
Query: 290 NPDNFAILRALLLKLEKRIA--------EVPINSKELGFTKPGPYIYELLADLNITQETA 341
N N L +LL+ L + I E+ N G I++LL + +++ A
Sbjct: 437 NRVNLLKLNSLLMTLIQFIVKNFKKIGQEIDPNDMFTGSNIDTLNIHKLLRYIKVSK-IA 495
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREAD 401
YK ID A L +E+ +N+ +S+S+ ++F+ + +
Sbjct: 496 YK-IDTYNQA--LKEEESSKNENPIKETHKKSVSS-QPLLFKVSQFLYCL--------TN 543
Query: 402 ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP- 460
+ + + ++ + P + + ++L GT+ PM F L P
Sbjct: 544 LTSEGQFFFEKNYSIKYMLLEPSKPFESILN-QAKCVVLAGGTMEPMSEFLSNLLPEVPS 602
Query: 461 ---LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY-KQELGNTIVNIARIVP 516
+ HVI + + I P L ++ R S L V++++ VP
Sbjct: 603 EDITTLSCNHVIPKENLQTYITN-QPE---LEFTFEKRMSPSLVNNHLFQFFVDLSKAVP 658
Query: 517 D--GLLIFFPSYYLMDQCIACWK-NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
G++ FFPSY + I CWK N L + +K E + D
Sbjct: 659 KKGGIVAFFPSYQYLAHVIQCWKQNDRFATLNNV-------RKIFYEAKDGDEILSGYSD 711
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
+A+ + G++ A+ GK+SEG++F D RAVV+ G+PF + ++ +KR++L
Sbjct: 712 SVAEGR-----GSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGELIVKRKHLA 766
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ GG +E + +++ +AVNQ+VGR IRH +DY I D R+ P+
Sbjct: 767 AKIMKSGGTEEEASRA---TKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPN 823
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ ++S W+Q I V+ + +FF
Sbjct: 824 FRKKLSRWVQDSINSEHTTHQVISSTRKFF 853
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSL-QNKCNALLESPTGTGKTLCLLCATLAW 59
P++ YD Q+ ME V + L + K A+LESPTGTGKTL L+CAT+ W
Sbjct: 13 PYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTW 59
>gi|6325249|ref|NP_015317.1| Chl1p [Saccharomyces cerevisiae S288c]
gi|116351|sp|P22516.1|CHL1_YEAST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1; AltName: Full=Chromosome
transmission fidelity protein 1
gi|3538|emb|CAA39922.1| CHL1 [Saccharomyces cerevisiae]
gi|683782|emb|CAA88378.1| Chl1p [Saccharomyces cerevisiae]
gi|965085|gb|AAB68097.1| Chl1p: kinetochore protein in the DEAH box family [Saccharomyces
cerevisiae]
gi|1314068|emb|CAA95033.1| Chl1p [Saccharomyces cerevisiae]
gi|285815528|tpg|DAA11420.1| TPA: Chl1p [Saccharomyces cerevisiae S288c]
gi|392296003|gb|EIW07106.1| Chl1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 861
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 176/690 (25%), Positives = 303/690 (43%), Gaps = 74/690 (10%)
Query: 68 TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT----SNYRPKM 123
TL +++ ++S ++ + + I Y SRT+SQL Q +L+ S++R K+
Sbjct: 204 TLLDKIDGKVSRDPNNGDRFDVTNQNPVKIYYASRTYSQLGQFTSQLRLPSFPSSFRDKV 263
Query: 124 -------VILGSREQLCIHREVSLLRG-SAQNNACRFL--CKKGT--NRRCNHHSRVADY 171
+ L S++QLCI+ +V + A N+AC L K+G + N D
Sbjct: 264 PDEKVKYLPLASKKQLCINPKVMKWKTLEAINDACADLRHSKEGCIFYQNTNEWRHCPDT 323
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ + E DIEDLV +G++ G CPY+ +RE ++V PY YL+ R L +
Sbjct: 324 LALRDMIFSEIQDIEDLVPLGKSLGICPYYASREALPIAEVVTLPYQYLLSESTRSSLQI 383
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSDETL 289
+NSI+I DEAHNL S +S + + KNC ++ + +S
Sbjct: 384 NLENSIVIIDEAHNLIETINSIYSSQIS-------LEDLKNCHKGIVTYFNKFKSRLNPG 436
Query: 290 NPDNFAILRALLLKLEKRIA--------EVPINSKELGFTKPGPYIYELLADLNITQETA 341
N N L +LL+ L + I E+ N G I++LL + +++ A
Sbjct: 437 NRVNLLKLNSLLMTLIQFIVKNFKKIGQEIDPNDMFTGSNIDTLNIHKLLRYIKVSK-IA 495
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREAD 401
YK ID A L +E+ +N+ +S+S+ ++F+ + +
Sbjct: 496 YK-IDTYNQA--LKEEESSKNENPIKETHKKSVSS-QPLLFKVSQFLYCL--------TN 543
Query: 402 ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP- 460
+ + + ++ + P + + ++L GT+ PM F L P
Sbjct: 544 LTSEGQFFFEKNYSIKYMLLEPSKPFESILN-QAKCVVLAGGTMEPMSEFLSNLLPEVPS 602
Query: 461 ---LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY-KQELGNTIVNIARIVP 516
+ HVI + + I P L ++ R S L V++++ VP
Sbjct: 603 EDITTLSCNHVIPKENLQTYITN-QPE---LEFTFEKRMSPSLVNNHLFQFFVDLSKAVP 658
Query: 517 D--GLLIFFPSYYLMDQCIACWK-NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
G++ FFPSY + I CWK N L + +K E + D
Sbjct: 659 KKGGIVAFFPSYQYLAHVIQCWKQNDRFATLNNV-------RKIFYEAKDGDDILSGYSD 711
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
+A+ + G++ A+ GK+SEG++F D RAVV+ G+PF + ++ +KR++L
Sbjct: 712 SVAEGR-----GSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGELIVKRKHLA 766
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ GG +E + +++ +AVNQ+VGR IRH +DY I D R+ P+
Sbjct: 767 AKIMKSGGTEEEASRA---TKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPN 823
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ ++S W+Q I V+ + +FF
Sbjct: 824 FRKKLSRWVQDSINSEHTTHQVISSTRKFF 853
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSL-QNKCNALLESPTGTGKTLCLLCATLAW 59
P++ YD Q+ ME V + L + K A+LESPTGTGKTL L+CAT+ W
Sbjct: 13 PYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTW 59
>gi|346319590|gb|EGX89191.1| DNA repair helicase RAD3 [Cordyceps militaris CM01]
Length = 709
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 153/605 (25%), Positives = 270/605 (44%), Gaps = 54/605 (8%)
Query: 126 LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPID 184
L SR+ LC+H V + GS + CR L + D ++++ + +
Sbjct: 33 LTSRKNLCLHPSVKREKSGSVVDARCRSLTAGFVKEKKERGEDNLDLLESHNLIPNGVWT 92
Query: 185 IEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEA 243
+ ++ G CPYF R + + ++V Y+YL+DP + + ++ K+ I++FDEA
Sbjct: 93 FDGILRYGEENKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEA 152
Query: 244 HNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLK 303
HN++ +C ++ S D++ L A+N + R ++ E L + +++ L
Sbjct: 153 HNIDNVCIESLSTDITEESLRRATRGAQNLKQKIADMR-ETDQEQLQNEYEKLVQGLREA 211
Query: 304 LEKRIAEV----PINSKEL------GFTKPGPYIYELLADLNITQETAYKLIDIV-EVAA 352
E R + P+ +EL G + + L +T K+ ++ E
Sbjct: 212 DEARQEDAFMANPVLPEELLKEAVPGNIRRAEHFVSFLQRFIEYLKTRMKVRQVISETPP 271
Query: 353 ELL---QEDKLQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREADANAA 405
L +E KK C R+ S+ L++ I + A + V +
Sbjct: 272 SFLAHLKEHTFIEKKPLGFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFL 331
Query: 406 DVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKL 457
+L+ S T L + C + IA++ F R S+I+TSGT+SP++ + + L
Sbjct: 332 LILEPYESDTAEVPNPILHFTCLDAAIAIRPIFDRFY--SVIITSGTISPLEMYPKMLDF 389
Query: 458 NFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPD 517
+ ++ + + IV G +++S++ R+ + GN + A+I PD
Sbjct: 390 STVIQESYSMTLARRSFLPMIVTRGSDQASISTSFQVRNEPSVVRNYGNLLTEFAKITPD 449
Query: 518 GLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAK 577
GL++FFPSY M+ I+ W+ G L +W K+K +VE + LA+E Y
Sbjct: 450 GLVVFFPSYLYMESIISMWQGM--GILDEVW----KYKLILVETPDAQETSLALETYRTA 503
Query: 578 LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
+ GA+ V RGKVSEG+DF GR V+ G+PF ++ + E+L
Sbjct: 504 C--CNGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFL----- 556
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
+ET + D+ + A R Q +GRV+R + DYG ++ D RF ++ Q
Sbjct: 557 ------RETYR--IKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRPQ 606
Query: 698 ISLWI 702
+ WI
Sbjct: 607 LPKWI 611
>gi|154419164|ref|XP_001582599.1| helicase [Trichomonas vaginalis G3]
gi|121916835|gb|EAY21613.1| helicase, putative [Trichomonas vaginalis G3]
Length = 1428
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 150/287 (52%), Gaps = 42/287 (14%)
Query: 5 KIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
KI GIDV FP+E Y Q V MEK I+ + + NAL+ESPTGTGKTL LL A+LA+
Sbjct: 6 KIMGIDVLFPYEKPYKSQEVVMEKTIKGIASNHNALIESPTGTGKTLALLSASLAY---- 61
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM 123
Q D KL +I+YTSRTH+QL+QVI E K Y+ +M
Sbjct: 62 ------------------------QHVDPKLDSIIYTSRTHTQLKQVISEYKRLPYKVQM 97
Query: 124 VILGSREQLCIHREVSLLRGSAQNNACRFLCKKG-----TNRRCNH--HSRVADYMKNNP 176
+L SR++LCI+ EV + N C L T +C + H++V ++
Sbjct: 98 TVLASRKRLCINDEVRESPNTDIN--CYILTHPKTVNGVTQEQCPYFVHAQVEKAPRSLT 155
Query: 177 HLGDEP-IDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKN 235
GD P D+E+L G+ CPY++ + L+ + I+F+PYNY +D F N
Sbjct: 156 IEGDLPKFDLEELFQYGKRHAACPYYLAKNLKSSAKIIFSPYNYYLDTIFSSEF---LTN 212
Query: 236 SILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRG 282
SILIFDEAHN+E + A+F + LLT AK + S R G
Sbjct: 213 SILIFDEAHNIENAARNIATFKMPFELLTRINISAKQIAERKSDRFG 259
Score = 139 bits (350), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 37/300 (12%)
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIV 479
C +P + ++ + SIIL SGTLSP SF EL L FP++ PHVI+ Q+ +
Sbjct: 379 CLDPSVVFEQAGK-SAKSIILASGTLSPQQSFESELGLPFPIKASVPHVISPDQVKLYQI 437
Query: 480 PVGPSGYLLNSSYRNRDSIEYKQ-----ELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
VG +G + S + D +E + + G +++I + G+L+F PSY + ++ +
Sbjct: 438 -VGTNGRRMTSLF---DEMEKRGKQILLDFGRGVLSIVKNTDGGVLVFMPSYAVREKMMK 493
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ I E+I K + + Q I DY AV FA+C+G
Sbjct: 494 VWRKAG------IAEQIYKERW-IFNEEQGKDMKKVISDY-----KNCKGRAVLFAICKG 541
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
+ EG+DF+D+ RAVV G+P+ + ++ KR + + G+
Sbjct: 542 SIGEGIDFSDYHARAVVCFGIPYPPSKEQEIIQKRLFNNKNRPKYNGKL----------- 590
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
WYN Q R + Q +GRVIRH DYGA+ ++R HP R W+ +I+ K D
Sbjct: 591 -WYNGQGMRTLFQVLGRVIRHSQDYGALFVFEDRL-HPQR--DFPSWMTRNIEQTYKTAD 646
>gi|207340439|gb|EDZ68787.1| YPL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270082|gb|EEU05324.1| Chl1p [Saccharomyces cerevisiae JAY291]
gi|259150146|emb|CAY86949.1| Chl1p [Saccharomyces cerevisiae EC1118]
Length = 861
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 176/690 (25%), Positives = 303/690 (43%), Gaps = 74/690 (10%)
Query: 68 TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT----SNYRPKM 123
TL +++ ++S ++ + + I Y SRT+SQL Q +L+ S++R K+
Sbjct: 204 TLLDKIDGKVSRDPNNGDRFDVTNQNPVKIYYASRTYSQLGQFTSQLRLPSFPSSFRDKV 263
Query: 124 -------VILGSREQLCIHREVSLLRG-SAQNNACRFL--CKKGTN--RRCNHHSRVADY 171
+ L S++QLCI+ +V + A N+AC L K+G + N D
Sbjct: 264 PDEKVKYLPLASKKQLCINPKVMKWKTLEAINDACADLRHSKEGCMFYQNTNEWRHCPDT 323
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ + E DIEDLV +G++ G CPY+ +RE ++V PY YL+ R L +
Sbjct: 324 LALRDMIFSEIQDIEDLVPLGKSLGICPYYASREALPIAEVVTLPYQYLLSESTRSSLQI 383
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID--ISSTRRGQSSDETL 289
+NSI+I DEAHNL S +S + + KNC ++ + +S
Sbjct: 384 NLENSIVIIDEAHNLIETINSIYSSQIS-------LEDLKNCHKGIVTYFNKFKSRLNPG 436
Query: 290 NPDNFAILRALLLKLEKRIA--------EVPINSKELGFTKPGPYIYELLADLNITQETA 341
N N L +LL+ L + I E+ N G I++LL + +++ A
Sbjct: 437 NRVNLLKLNSLLMTLIQFIVKNFKKIGQEIDPNDMFTGSNIDTLNIHKLLRYIKVSK-IA 495
Query: 342 YKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREAD 401
YK ID A L +E+ +N+ +S+S+ ++F+ + +
Sbjct: 496 YK-IDTYNQA--LKEEESSKNENPIKETHKKSVSS-QPLLFKVSQFLYCL--------TN 543
Query: 402 ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP- 460
+ + + ++ + P + + ++L GT+ PM F L P
Sbjct: 544 LTSEGQFFFEKNYSIKYMLLEPSKPFESILN-QAKCVVLAGGTMEPMSEFLSNLLPEVPS 602
Query: 461 ---LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY-KQELGNTIVNIARIVP 516
+ HVI + + I P L ++ R S L V++++ VP
Sbjct: 603 EDITTLSCNHVIPKENLQTYITN-QPE---LEFTFEKRMSPSLVNNHLFQFFVDLSKAVP 658
Query: 517 D--GLLIFFPSYYLMDQCIACWK-NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
G++ FFPSY + I CWK N L + +K E + D
Sbjct: 659 KKGGIVAFFPSYQYLAHVIQCWKQNDRFATLNNV-------RKIFYEAKDGDDILSGYSD 711
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
+A+ + G++ A+ GK+SEG++F D RAVV+ G+PF + ++ +KR++L
Sbjct: 712 SVAEGR-----GSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGELIVKRKHLA 766
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ GG +E + +++ +AVNQ+VGR IRH +DY I D R+ P+
Sbjct: 767 AKIMKSGGTEEEASRA---TKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPN 823
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ ++S W+Q I V+ + +FF
Sbjct: 824 FRKKLSRWVQDSINSEHTTHQVISSTRKFF 853
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSL-QNKCNALLESPTGTGKTLCLLCATLAW 59
P++ YD Q+ ME V + L + K A+LESPTGTGKTL L+CAT+ W
Sbjct: 13 PYKPYDIQVQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTW 59
>gi|156089201|ref|XP_001612007.1| DNA repair helicase (rad3) family protein [Babesia bovis]
gi|154799261|gb|EDO08439.1| DNA repair helicase (rad3) family protein [Babesia bovis]
Length = 948
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 157/276 (56%), Gaps = 27/276 (9%)
Query: 6 IRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLA--WR--- 60
I GI+V FP+ Y+ Q VYME VI+++++ NALLESPTGTGKTL L+C+TLA W
Sbjct: 11 IDGIEVRFPYTPYENQTVYMETVIKAVRHGKNALLESPTGTGKTLSLICSTLACIWHTRF 70
Query: 61 KSLGSFSTLGSQVNNQ------ISGSQSSVNSSQS-----GDSKLPTILYTSRTHSQLRQ 109
K SF+ Q ++ + + S+ ++ G KL ILY SRTH+QL+Q
Sbjct: 71 KDETSFNLKPVQTTSEEGLMKTMQDLRDSIQQKKTIVKFKGSKKL-RILYASRTHNQLKQ 129
Query: 110 VIQELKTSNYRPKM-------VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRC 162
VI+E K ++Y + V+LGSR+QLCIH G A N CR + K ++ C
Sbjct: 130 VIREAKKTSYAKEFASKGLTTVLLGSRDQLCIHPGKKNATGEALNAFCRKMVK---HQGC 186
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
++ + + E +DIEDL+++G++ CP++ R+ ++ D+ PYNYL+
Sbjct: 187 MYYRGLKKKEISRKIQFYEFVDIEDLISLGKSTRCCPFYACRDAHESADVTMLPYNYLLS 246
Query: 223 PWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
P R + + N++LI DEAHN+E + +A F +
Sbjct: 247 PISRDAMDIVLDNAVLIIDEAHNIESVAESSAGFTI 282
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 159/310 (51%), Gaps = 33/310 (10%)
Query: 414 RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL---KLNFPLRVENPHVIT 470
+ +++ C + V S+ILTSGTLSP+ A + K+ F ++ + H++
Sbjct: 515 KVMAFECMQSTPSFLGLQNAGVRSVILTSGTLSPLADLANSIGGDKVRFEYQLSSSHIVP 574
Query: 471 SKQIWAGIVPVGP-SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ ++ G G +L+S Y NR + Y + LG +++ R VP G+L+FF SY ++
Sbjct: 575 VSNLCPRVITGGDVDGSILSSDYNNRSTPSYIKALGESVLTFVRCVPAGVLVFFVSYPVL 634
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLA--------IEDYMAKLKDT 581
+ + WK+ I+ + K K+ +E + S+ + ++D ++LK+
Sbjct: 635 EDTVNAWKSAG------IFAALEKEKRVFIESKGSAKSFVGNYYNRNTNVDDTQSQLKEY 688
Query: 582 ST-----SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
T G +F VCRGK++EG+DF+D + R V + G+P+ + + LK +YL
Sbjct: 689 FTLTDKGVGCLFLGVCRGKLAEGIDFSDDSCRGVFLCGVPYPNPYEETIALKMDYL---- 744
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
+ G+ E W+ QA RAVNQA+GRVIRH +DYGAI+ D RF+
Sbjct: 745 RKLYGKNNENV------THWFTSQAIRAVNQAIGRVIRHINDYGAIVLADRRFSAEHILK 798
Query: 697 QISLWIQPHI 706
+S W+ +I
Sbjct: 799 SVSSWVTRNI 808
>gi|365757958|gb|EHM99827.1| Chl1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 861
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 178/709 (25%), Positives = 311/709 (43%), Gaps = 112/709 (15%)
Query: 68 TLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT----SNYRPKM 123
TL ++++ +IS S+ N + I + SRT+SQL Q +++ S++R K+
Sbjct: 204 TLLNRIDGKISMDSSNSNCFAVLNQNPVKIYFASRTYSQLSQFTSQIRLPTFPSSFRNKV 263
Query: 124 -------VILGSREQLCIHREVSLLRG-SAQNNACRFL--CKKGTN--RRCNHHSRVADY 171
+ L S++QLCI+ +V+ + A N+AC K+G + + N D
Sbjct: 264 PDEKVKYLPLASKKQLCINPKVTKWKTLEAINDACTDARHSKEGCSFYQNTNEWRHAPDT 323
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ + E DIEDLV +G++ G CPY+ +RE ++V PY YL+ R L +
Sbjct: 324 LALRDTIFSEIQDIEDLVPLGKSLGICPYYASREALPIAEVVTLPYQYLLSESTRSSLQI 383
Query: 232 EWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNP 291
+ +++I+I DEAHNL S ++S L C + +R LNP
Sbjct: 384 DLQDAIVIIDEAHNLIETINSIYSSEVSLEDLRNCHKGILTYFNKFKSR--------LNP 435
Query: 292 DNFAILRALLLKLEKRIAEVPINSKELGF-TKPGPYIYELLADLNITQETAYKLIDIVEV 350
N L L L I + N K++G P ++ NI +K++ ++V
Sbjct: 436 GNRVNLLKLNSLLTTLIQFITKNFKKIGLEIDPN----DMFEGSNIDTLNIHKILRYIKV 491
Query: 351 AAELLQEDKLQNKKSTTACRIESISNILKII--FRDKGTAHSAYYRVHVREADANAADVL 408
S A +I++ + L+ I R++ + A+ + ++ L
Sbjct: 492 --------------SKIAYKIDAYTQALEDIESVRNEKQTNGAHRK-------PVSSQPL 530
Query: 409 KGKASRTLS---------WWCFNPGIAM--------QEFSRL--EVGSIILTSGTLSPMD 449
K S+ LS + F G ++ + F + + ++L GT+ P+
Sbjct: 531 LFKVSKFLSCLTNLTSEGQFFFEKGCSIKYMLLEPSEPFDSILNQAKCVLLAGGTMEPVS 590
Query: 450 SFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQE------ 503
F L FP +V + + T ++P L + N+ E+ E
Sbjct: 591 EFLTNL---FP-KVSSESITTFS--CNHVIPKEN----LKTYATNQSEFEFTFEKRMSPS 640
Query: 504 -----LGNTIVNIARIVPD--GLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
L I+ ++ VP G++ FFPSY + I CWK NLT + K +K
Sbjct: 641 LINDRLFQFIIELSEAVPQKGGIVAFFPSYQYLAHIIECWKQNE--NLT----HLNKVRK 694
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTSTSG--AVFFAVCRGKVSEGLDFADHAGRAVVITG 614
E + ED +A ++ G ++ FA+ GK+SEG++F D+ RAVV+ G
Sbjct: 695 IFYESKDG-------EDILAGYSESVAEGKGSILFAIVGGKLSEGINFQDNLCRAVVMVG 747
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+PF + ++ +KR++L + GG +E + ++ +AVNQ++GR IR
Sbjct: 748 LPFPNIFSGELIIKRKHLTNKIMKSGGTKEEAS---QATREFMENICMKAVNQSIGRAIR 804
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
H +DY I D R+ P+ + ++S W++ I ++ + FF
Sbjct: 805 HANDYANIYLLDVRYNRPNFREKLSRWVKDSINSEQTINQIISSTRLFF 853
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 14 PFEAYDCQLVYMEKVIQSL-QNKCNALLESPTGTGKTLCLLCATLAW 59
P+E YD Q+ ME V + L + K A+LESPTGTGKTL L+CAT+ W
Sbjct: 13 PYEPYDIQIQLMETVYRVLSEGKKIAILESPTGTGKTLSLICATMTW 59
>gi|91081131|ref|XP_975541.1| PREDICTED: similar to regulator of telomere elongation helicase 1
rtel1 [Tribolium castaneum]
Length = 861
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 174/680 (25%), Positives = 293/680 (43%), Gaps = 123/680 (18%)
Query: 95 PT-ILYTSRTHSQLRQVIQELKTSNYRPKMVI--LGSREQLCIHREVSLLRG-SAQNNAC 150
PT I SRTHSQL Q I E+ S + + + L SR+ CI+ V+ L+ S N C
Sbjct: 173 PTKIFICSRTHSQLSQFIGEILKSPFGKNIRVASLASRQNYCINPNVNKLKNNSLINEKC 232
Query: 151 RFLCK----------------KGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRT 194
+ K +GT +C ++ + + L E D+EDLV G+
Sbjct: 233 LDMQKQSKSQKDADGKTIKKPRGTTTKCPYYKQSTIEDLKDLTLT-EVQDVEDLVKSGKE 291
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ +R + ++V PYN ++ R+ G++ K++++I DEAHNL
Sbjct: 292 LNACPYYSSRLAAEDAEVVLVPYNTILHKATREANGIDLKDNVIIIDEAHNLLEAMGQMY 351
Query: 255 SFDLS-----SGLL-TACISE-------AKNCIDISS-----TRRGQSSDE--------- 287
S +L+ GLL C + A N + I+ T+ Q D+
Sbjct: 352 SSELTYSQIDQGLLQVKCYKQRFNTRFSAPNLLLINQLIFVITKLQQLLDQNSEEKTDVF 411
Query: 288 -------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQET 340
T DNF + R + + RIA+ K Y + D +I ++
Sbjct: 412 TIENFVLTAKIDNFNMFRLVKFCKDGRIAQ-----------KVRSYALKYPFDKSIIEKP 460
Query: 341 AYKLIDIVEVAAELLQEDKLQNKKSTTACRIE-----SISNILKIIFRDKGTAHSAYY-- 393
A K + + L + NK T IE +++N L I T +Y
Sbjct: 461 AKKGV------KDFLSS--ITNKNETVEQNIEKPAAFALTNPLLAIISFLETLTYSYKDG 512
Query: 394 RVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ 453
R+ V + K+ L + NP ++ +L S+I+ GT+ P + F
Sbjct: 513 RIFVHTN--------QDKSKIKLQFLLLNPTQNFEDIVKL-ARSVIVCGGTMKPNEEFRN 563
Query: 454 ELKLNFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNT 507
L ++ + E H+I + I I+ G + L ++ R S+ +
Sbjct: 564 RLFISSGVSPERIFEFSCGHIIPPENILPVIMTEGANKEKLLFNFERRMSM--GGCIKRI 621
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLF 567
+V + ++V G+++FFPSY + K+ S G L EP+ S
Sbjct: 622 LVEVCKVVKGGIVVFFPSYNYENWVWQQIKDVSFGRLV------------FREPQDSGSV 669
Query: 568 PLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRL 627
++ Y + S SGA+ +V GK+SEGL+F+D GR V++ G+P+A +T P ++
Sbjct: 670 DSVLKSYSDAVH-KSNSGALLLSVVGGKLSEGLNFSDDLGRCVIVVGLPYANITAPDLKE 728
Query: 628 KREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDE 687
K +LD + + G +G+ +Y +AVNQ++GR +RH++DY I+ DE
Sbjct: 729 KMSHLD-KIEGSG-----------AGKRFYESLCMKAVNQSIGRAVRHKNDYATILLLDE 776
Query: 688 RFAHPSRKSQISLWIQPHIQ 707
R+ + K + WI+ ++
Sbjct: 777 RYNRTATKEALPDWIKKSLK 796
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
+ EFPF+ Y Q +M + + ++NK + ESPTGTGK+L +LC + W K
Sbjct: 6 NFEFPFQPYPIQHAFMRNLFEVIENKKFGIFESPTGTGKSLSILCGAIRWLK 57
>gi|399218456|emb|CCF75343.1| unnamed protein product [Babesia microti strain RI]
Length = 824
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 161/645 (24%), Positives = 285/645 (44%), Gaps = 82/645 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYR----PKMVILGSREQLCIHREV-SLLRGSAQ--NNA 149
I+ SRTH+QL Q I+E+K + + + I SR+ LC+++ + S +GS + N+
Sbjct: 163 IIICSRTHTQLNQFIKEVKKLDPQLYCDVRFAIASSRQYLCVNKHILSTSKGSVELLNDE 222
Query: 150 CRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIG--RTFGPCPYFMTRELQ 207
CR +C S + +++ P+D +L IG CPY+ ++
Sbjct: 223 CR-------RSKCQFKSNITPIIESTISY---PLDQSELRLIGSENCLSSCPYYASKHTI 272
Query: 208 KTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACI 267
K D++ APYN++I+ R+ G++ ++ILIFDEAHNL DA + S T
Sbjct: 273 KYADVILAPYNFIINKSLRESSGLKIDHNILIFDEAHNL----GDAITNSTSVSFTTY-- 326
Query: 268 SEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYI 327
+ I + R + ++ P + + KL + + I E I
Sbjct: 327 ---DSLILLEQIRMYTNKYNSILPQDTKFNLGTITKLLESFTNIKICVDEKVID-----I 378
Query: 328 YELLADLNITQETAYKLIDIVEVAAELLQ--------EDKLQ---NKKSTTACRIESISN 376
+ L + I + + +ID + + L+ KL+ NK+++ N
Sbjct: 379 SQFLVECGIATLSIHSIIDFLTNSEICLKIRSYAEGLYSKLEYNYNKETSIIYMFREFLN 438
Query: 377 ILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL--E 434
+ + +D S H E V K L ++ I FS +
Sbjct: 439 CILLCTKDDKIIIS-----HQNETPYYEGLVSKFINDTYLKIEIYSLSI-FDSFSEIITS 492
Query: 435 VGSIILTSGTLSPMDSFAQEL-KLNFPLRV-ENPHVITSKQIWAGIVPVGPSGY-LLNSS 491
S++L SGTL+P+ + + +R+ NP + T +I+ I+ PS +LN +
Sbjct: 493 ARSVMLVSGTLTPIHEYLMMIPSTKDKVRIFRNPGIFTIDKIYCNIISTTPSNNNVLNFT 552
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
+ R + L I N++ +VP+GLL+FF S+ M + + ++
Sbjct: 553 HEKRTDRNTMEGLCQIISNLSLVVPEGLLVFFTSFNYMHSFLTFGLGNRY--------KM 604
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
+ P+ +++ + M + ++ +GAV FA+ K SEG+DF+DH RA++
Sbjct: 605 NQFDGPLSSLKKNIFIEGTTPNLMEQYTKSAINGAVLFAIFGAKFSEGIDFSDHLARAII 664
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA------- 664
+ G+P+ + K++LK +Y +++QS G + T++ S + N +A
Sbjct: 665 LIGLPYPPES-SKLKLKEQYYRIKSQSTIGS-RTTQIDLSSQLNILNINDIKASLMTETV 722
Query: 665 ----------VNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
+NQA+GR IRH +DY AII D R+ S S +S
Sbjct: 723 NLRKIICFKTINQAIGRAIRHINDYAAIILIDNRYLQQSNISFLS 767
>gi|195420015|ref|XP_002060745.1| GK24076 [Drosophila willistoni]
gi|195441759|ref|XP_002068656.1| GK23573 [Drosophila willistoni]
gi|194156830|gb|EDW71731.1| GK24076 [Drosophila willistoni]
gi|194164741|gb|EDW79642.1| GK23573 [Drosophila willistoni]
Length = 216
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 133/237 (56%), Gaps = 32/237 (13%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP I GI V FPFE Y+ Q +MEKVI L++ N +LESPTGTGKTL LLC +LAW
Sbjct: 1 MPESIIAGIPVHFPFEPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCLSLAW- 59
Query: 61 KSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR 120
+ + QS +P ++Y SRTHSQL Q ++ELK S Y
Sbjct: 60 -----------------------IRTRQSEQQGVPKVIYASRTHSQLTQAMRELKRSAYA 96
Query: 121 P-KMVILGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRCNHHSRVADYMKNNPHL 178
+ V+LGSR+QLCIH EV +G++ N C+ T C+ RV + K++P
Sbjct: 97 GMRSVVLGSRDQLCIHPEVMREQGNSNKVNMCKMRVHSKT---CSFQLRV-ESKKDHPDF 152
Query: 179 -GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
G +DIEDLV +G+ CPYF +++L DI F PYNYL+DP RK V W+
Sbjct: 153 RGPSIMDIEDLVKVGQKLKMCPYFASKKLVNDADITFMPYNYLLDPMARKANKV-WR 208
>gi|401882732|gb|EJT46976.1| general RNA polymerase II transcription factor [Trichosporon asahii
var. asahii CBS 2479]
Length = 794
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 166/715 (23%), Positives = 311/715 (43%), Gaps = 132/715 (18%)
Query: 43 PTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSR 102
P+GTGKT+ LL +++ + G K ++Y SR
Sbjct: 63 PSGTGKTVSLLSLIISYMQFYGG--------------------------EKKRKLIYCSR 96
Query: 103 THSQLRQVIQELK-TSNYRPKM---------VILGSREQLCIHREVSLLRGSAQNNACR- 151
T ++ + + ELK YR M + L SR+ LC++ E +G ++ CR
Sbjct: 97 TVPEIEKALAELKRLMEYREDMGAKDTGFRGLGLTSRKNLCLNPEEK--KGKVVDSRCRD 154
Query: 152 ----FLCKKG-----TNRRCNHHSRVADYMKNNPHLGDEPI-DIEDLVNIGRTFGPCPYF 201
F C+KG + + C+ H + +Y HL E + ++D+ G+ G CPYF
Sbjct: 155 MTSSFACEKGRADPGSVQLCSWHEELNNYEPG--HLIPEGVWTLDDVKKYGQEKGVCPYF 212
Query: 202 MTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSG 261
R + VD++ ++YL+DP + + E ++ FD +
Sbjct: 213 TIRRMMPYVDVIIYSFHYLLDPKVAEQVSAELSKEAIVV---------------FDEAHN 257
Query: 262 LLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKR----IAEVPINSKE 317
+ +++ + ID +S E LN + ++ L ++R + P+ S++
Sbjct: 258 IAARSVAKIGDKID----EIKKSDAEKLNAEYQKLVDGLAAANDRREEDDMLSNPVLSED 313
Query: 318 L------GFTKPGPYIYELLADLNITQETAYKLIDIVEVAAE----LLQEDKLQNKKSTT 367
+ G + + L +T +++ +V + L+E K+
Sbjct: 314 MIQEAIPGNIRKAEHFIAFLKRFIEYLKTRMRVLHVVAETPQSFMAHLKEITFIEKRPLQ 373
Query: 368 AC--RIESISNILKIIFRDK----------GTAHSAY---YRVHVREADANAADVLKGKA 412
C R+ S+ L++ D+ GT + Y + + + + A V
Sbjct: 374 FCAERLTSLIRTLELTNLDEHFALQKIASFGTLVATYEKGFLLILEPYETEHATV----P 429
Query: 413 SRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITS 471
+ + C +P +AM F R S+I+TSGT+SP+D + + L+ ++ P +T
Sbjct: 430 NPIFHFTCLDPSLAMAPVFERF--SSVIITSGTISPLDMYPKMLQFQPVIQESYPMTLTR 487
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
++ G ++S + R+ + G+ ++++A+ VPDG++ FFPSY M+
Sbjct: 488 NAFLPMVITRGSDQVPISSRFEVRNDPAVVRNFGSILIDMAKTVPDGVVAFFPSYLYMES 547
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
++ W + G L+ +W KHK VE + +A+++Y + GAV +V
Sbjct: 548 IVSAWYDM--GILSEVW----KHKLLFVETPDAMETSIALKNYREAC--NNGRGAVLLSV 599
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
RGKVSEG+DF + GRAV++ G+P+ ++ + E+L + + +Y L+F
Sbjct: 600 ARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNHRIRENDY----LTF- 654
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGRV+R + D+G ++F D+ +++++ WI +I
Sbjct: 655 --------DAMRHAAQCVGRVLRGKTDWGLMVFADK-----DKRAKLPRWINQYI 696
>gi|340381258|ref|XP_003389138.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 300
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 6/151 (3%)
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y K+ G FF VCRGKVSEGLDFAD+ GRAV+ITG+P+ +PKV+LK EYL
Sbjct: 4 YYEKIGSADKVGGAFFGVCRGKVSEGLDFADNNGRAVIITGLPYPPFAEPKVQLKMEYL- 62
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
+ + T+L ++ + WYNQQA+RAVNQA+GRVIRH++DYGAII CDERFA+
Sbjct: 63 ---KDARSNFNRTEL--ITDKQWYNQQATRAVNQAIGRVIRHKNDYGAIILCDERFAYSR 117
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
+ + LW++P +Q Y KFG LT FF+
Sbjct: 118 GQDDLPLWLRPQLQKYDKFGPAQRDLTSFFK 148
>gi|67601888|ref|XP_666434.1| DNA repair protein-related [Cryptosporidium hominis TU502]
gi|54657424|gb|EAL36199.1| DNA repair protein-related [Cryptosporidium hominis]
Length = 841
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 209/866 (24%), Positives = 343/866 (39%), Gaps = 221/866 (25%)
Query: 1 MPTYKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M + I ++V FP++ Y QL YM+ + Q L + +LE PTGTGKT+ LL
Sbjct: 1 MVRFFIEELEVFFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLL------ 54
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SN 118
S + S Q + ++Y +RT +++ + +QELKT +
Sbjct: 55 ----------------------SFITSYQLVHPNMGKLIYCTRTVAEMEKALQELKTVVD 92
Query: 119 YRPKMV-------------------------------ILG----SREQLCIHREVSLLRG 143
Y K + ILG +R +CI+ VS+
Sbjct: 93 YCKKEIENDKIKLELEIKSENNSSFASVSESRLSAASILGIGMTARRNMCINPRVSV--- 149
Query: 144 SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD-------EPIDIEDLVNIGRTFG 196
A + +C+ T ++ +N GD E DIE+++ G T
Sbjct: 150 HADRDKIDSMCRSMTAPWVRAKHQMEARERNALSEGDTNSSKMTEIADIEEMLESGCT-T 208
Query: 197 PCPY--------------------------------------------FMTRELQKTVDI 212
CPY F ++ L +T +
Sbjct: 209 LCPYYEAYERVWSSDLVPTGIYTIDEFKDFSKNWEHPILGKKIQFCPYFASKRLIQTAKV 268
Query: 213 VFAPYNYLIDP---------------WFRKG-------LGVEWKNSIL------------ 238
V Y Y++DP F G LG ++ S+L
Sbjct: 269 VVLNYQYILDPKVAQASLLGGGTVSQGFSHGANPNGLSLGSKFAASLLPEQEGTKEPSVV 328
Query: 239 IFDEAHNLEGICADAASFDLSSGLLTACI-------SEAKNCIDISSTR----------- 280
+FDEAHN++ +C +A S +++ +L+ SE ++ + R
Sbjct: 329 VFDEAHNIDNVCIEALSVNMNRQILSGAARNLRTLKSEIESLSSLDEQRLQDEYTRLIQG 388
Query: 281 ---RGQSSDETLNPD--NFAILRALLLKLEKRIAEVPINSKELGFT---KPGPYIYELLA 332
GQ DE + D F +L + K++K + I E T K Y+ E +
Sbjct: 389 LRNSGQVQDEAVLEDLERFPVLPEEMEKIKKGLIPGSIRRAEHFITIMKKLILYLQEYIR 448
Query: 333 DLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK------- 385
+ E + +E A+ +Q L+ R+ S+ N L+I+ D+
Sbjct: 449 VYSTRIEGPLTFVKHIE-ASCYIQSGLLKFCDE----RLRSLLNTLRIVDSDQYSSLELV 503
Query: 386 ---GTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTS 442
T +Y + + D + G + C + IAM+ + SI+LTS
Sbjct: 504 CTFFTILGSYSKGFIVIVDPYPE--VSGLYDPVIQLSCLDSSIAMRPILK-RYQSIVLTS 560
Query: 443 GTLSPMDSFAQELKLNFPLRVENPHVITSKQ-IWAGIVPVGPSGYLLNSSYRNRDSIEYK 501
GTLSP+D + + L P+ ++ + + I IV G L+S + +R + +
Sbjct: 561 GTLSPLDLYPKLLGF-IPVVSQSLTMTLDRTCICPLIVTRGSDQTPLSSKFESRADVSIQ 619
Query: 502 QELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEP 561
Q G I+ I + VPDG++ FF SY M+Q ++ W + + +I +HK VE
Sbjct: 620 QNYGKLILEITKKVPDGVVCFFSSYLYMEQMLSQWYESG------LLAQIMEHKLVFVET 673
Query: 562 RQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMT 621
+ LA+ Y K D GA+FF++ RGKV+EG+DF H GR VV+ G+P+
Sbjct: 674 KDIVSTTLALHHY-RKACDIG-RGAIFFSIARGKVAEGIDFDRHYGRCVVMVGIPYQYTL 731
Query: 622 DPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGA 681
++ + +L Q E+ L+F A R +Q VGRVIR + DYG
Sbjct: 732 SKILQSRLSFLKENYGIQENEF----LTF---------DAMRQASQCVGRVIRSKADYGL 778
Query: 682 IIFCDERFAHPSRKSQISLWIQPHIQ 707
+IF D R+ ++ +I WI H++
Sbjct: 779 MIFADLRYNKKDKREKIPPWILKHLK 804
>gi|402216420|gb|EJT96518.1| hypothetical protein DACRYDRAFT_25669, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 532
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 213/460 (46%), Gaps = 42/460 (9%)
Query: 97 ILYTSRTHSQLRQVIQEL-KTSNY-RPKMVILGSREQLCIHREVSLLRGSAQNNACRFLC 154
I YTSRTHSQL Q++ EL KT Y + + V LGSR LCI+ E+ G + ACR L
Sbjct: 87 IYYTSRTHSQLSQLVSELRKTPLYEKTRFVALGSRRNLCINHELRNKAGGDLDEACRDLV 146
Query: 155 KKGTNRRCNH---HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
+ C H ++ + H+ P DIEDLV +G CPY+ +R+ K +
Sbjct: 147 NNKQGKGCPFLPSHDEMSKMLDFRDHVLAAPKDIEDLVTLGEELKICPYYGSRQAIKQSE 206
Query: 212 IVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
+V PYN L+ R+ L + + +++ DEAHNL S LS+ L C+ +
Sbjct: 207 VVTLPYNLLLQKSAREALDINLHDQVVVIDEAHNLIDTVLSIHSVTLSTTTLETCLGQL- 265
Query: 272 NCIDISSTRRGQSSDETLNPDNF-AILRALL-LKLEKRIAEVPINSKELGFTKPGPYIYE 329
I ++ R+ +S ++ A L AL L+ + A+ N + L + +
Sbjct: 266 -AIYVTKFRKRLASKHLIHLKRLVAFLSALENFCLDWQSADATKNEEMLSIAGVAESLGQ 324
Query: 330 LLADLNITQETAY----KLIDIVEVAAELLQEDKLQN-------KKSTTACRIESISNIL 378
+ +N+ + Y K+ + + L ED+++N + TT + ++ L
Sbjct: 325 KVDGINLLEIEQYLKESKIARKISGYNDKLAEDQVKNGDTKFTKSRRTTNPPLHAVQAFL 384
Query: 379 KIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSI 438
++ RVH+ ++ V+ GK TL + NP + QE E ++
Sbjct: 385 LVLMNSDEDG-----RVHLSKS------VIDGKVVVTLCYQLLNPSPSFQEVVD-EARAV 432
Query: 439 ILTSGTLSPMDSFAQELKLNFPLRVEN-------PHVITSKQIWAGIVPVGPSGYLLNSS 491
+L GT+ P+ F +L FP +EN HV+ + + A V GP G L+
Sbjct: 433 VLAGGTMEPISDFRTQL---FPRLLENRFATFSCGHVVAKENLTALAVSRGPKGGDLSFK 489
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
Y +R ELG ++N +VPDG+++F PSY ++Q
Sbjct: 490 YSSRGDKGMASELGQALLNFLSLVPDGMVVFMPSYAFLNQ 529
>gi|443709796|gb|ELU04301.1| hypothetical protein CAPTEDRAFT_175213 [Capitella teleta]
Length = 875
Score = 169 bits (428), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 163/320 (50%), Gaps = 25/320 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL--KLNFP-LRVEN---PHV 468
++ + NP + E R E ++IL GT+ P++ F ++L P R+ HV
Sbjct: 566 SVRFILLNPSVHFSEIIR-EARAVILAGGTMQPVNDFKEQLFKAAGVPEQRIREFSCGHV 624
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I KQ+ + G SG L+ +Y+ RD + ELG I N+ + P G++ FFPSY L
Sbjct: 625 IPPKQLLPIALARGSSGTELDFTYQKRDQPQMMSELGRVIYNVCNLTPGGVVCFFPSYEL 684
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK-----DTST 583
A W+ N ++ KK EPR+S+ + +Y A ++ TS
Sbjct: 685 ERTVHAYWEKEGFLN------KMAAKKKIFREPRKSNQVDRILREYSACIERHASGGTSI 738
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GAV F V GK+SEG++F+D+ R VV+ G+P+ + P+++ K EYL+
Sbjct: 739 TGAVMFCVVGGKMSEGINFSDNLCRCVVMVGLPYPNIRSPELKEKMEYLN-------ATM 791
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
T G+ Y +AVNQ++GR IRH+ DY AI+ D+R+ + +S++ WI
Sbjct: 792 PRTPDGQTPGQLHYENLCMKAVNQSIGRAIRHQADYAAILLLDQRYLKANVQSKLPSWIC 851
Query: 704 PHIQCYSKFGDVVYTLTRFF 723
H+Q +FG V L +FF
Sbjct: 852 KHLQNIQRFGPTVSALRKFF 871
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 17/196 (8%)
Query: 91 DSKLPTILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRG-SAQN 147
D ++ I Y SRTHSQL Q ++E++ S + ++ LGSR+ CI+ V L S N
Sbjct: 193 DEQITKIFYCSRTHSQLTQFVREVQKSPFGESTHLISLGSRQNTCINEAVKRLSSLSLIN 252
Query: 148 NACRFLCKKGTNRRCNHHSRVAD---------YMKNNPHL-GDEPI----DIEDLVNIGR 193
+ C + + + +R + + Y +++ HL D + DIE LV G+
Sbjct: 253 DRCLEMQRSKSEKRNKDGEKSSKMTKQCGCPFYKQDSLHLLKDRALIDVQDIEQLVTQGK 312
Query: 194 TFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADA 253
CPY+ +R IV PY L+ R+ GV+ K ++I DEAHNL ++
Sbjct: 313 QTKACPYYSSRLAVPAAQIVVLPYQMLLHKSTRESCGVKLKGQVVIIDEAHNLLETISNI 372
Query: 254 ASFDLSSGLLTACISE 269
S ++ LT S+
Sbjct: 373 HSTSVNGLQLTCAYSQ 388
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPFE Y Q +M + +++ + ESPTGTGK+L L+C L W
Sbjct: 9 FPFEPYGIQEAFMHNLYSAIEGGQMGIFESPTGTGKSLSLICGALTW 55
>gi|224149616|ref|XP_002336837.1| predicted protein [Populus trichocarpa]
gi|222836982|gb|EEE75375.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 147/303 (48%), Gaps = 51/303 (16%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQ-----NKCNALLESPTGTGKTLCLLCATL 57
+Y I GI VEFP++ Y QL +M +VI +L C+ALLESPTGTGK+L LLC+TL
Sbjct: 17 SYHIGGIQVEFPYKPYGTQLAFMGRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSTL 76
Query: 58 AWRKSL--------------------------GSFSTLGSQVNNQISGSQSSVNSSQSGD 91
AW+++ G F + + + + + S
Sbjct: 77 AWQQNYKLKNQYANLTHSTPNPEAITDPLAHGGGFVPESTPSSTEPTAAVELAQKVASNK 136
Query: 92 SK--LPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSREQLCIHREVSLLRGSAQNNA 149
K +P I Y SRTHSQ+ QV+ E + + YR M +L SR+ C + V+ R +
Sbjct: 137 KKKAVPKIYYASRTHSQISQVVSEFRKTTYRVPMAVLASRKHYCTNVHVN--RKENVDEE 194
Query: 150 CRFLCK---------KGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPY 200
C+ L K K N+ H S K H E DIEDLV +G+ C Y
Sbjct: 195 CKLLLKDKEAGCLQFKNANKVRGHPS----LQKGGCH---EVHDIEDLVKVGQVVKGCSY 247
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSS 260
+ R + +VF PYNY+I+P R + V+ +IL+ DEAHN+E I DA S D+
Sbjct: 248 YAARSMADDAQLVFCPYNYIINPVIRGAMEVDIIGAILVLDEAHNIEDIARDAGSVDVEE 307
Query: 261 GLL 263
+L
Sbjct: 308 DVL 310
>gi|19115889|ref|NP_594977.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74581973|sp|O14147.1|CHL1_SCHPO RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|2408082|emb|CAB16287.1| ATP-dependent DNA helicase Chl1 (predicted) [Schizosaccharomyces
pombe]
Length = 844
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 155/298 (52%), Gaps = 20/298 (6%)
Query: 437 SIILTSGTLSPMDSF-----AQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS 491
S+ L GT+SP+D F + E P + H++ + I +V GP+G +
Sbjct: 561 SVNLAGGTMSPIDDFITLLFSDEQSRILPFSCD--HIVPPENITTILVSQGPAGVPFEFT 618
Query: 492 YRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
++ +D ++LG T N I+PDG+++FFPS+ + Q + W+ + I R+
Sbjct: 619 HKRKDDENLLKDLGRTFQNFISIIPDGVVVFFPSFAFLQQAVKVWE------MNGITNRL 672
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
K +E + PL ++ + D SG + F+V G++SEG++F+D GRAV+
Sbjct: 673 NAKKPLFIESKDFGDNPLDTFEHYKQSVDAGLSG-MLFSVIGGRLSEGINFSDKLGRAVM 731
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
+ GMPF D + + K Y++ +A+ +G K+ + +++Y RAVNQ++GR
Sbjct: 732 VVGMPFPNSQDVEWQAKVSYVEEKAKEKGINAKQ------ASQEFYENTCMRAVNQSIGR 785
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERIC 729
IRHR DY +II D R+ S + ++ W+ +I FG + L FFR +++C
Sbjct: 786 AIRHRDDYASIILLDSRYNRSSIQRKLPNWLSKNIHSSPNFGPAIRQLATFFRAKKMC 843
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 30/216 (13%)
Query: 74 NNQISGSQSSVNSSQSGDSKLPTIL----YTSRTHSQLRQVIQELKTSNYRP-----KMV 124
NN S S + S D++ P I+ +TSRTHSQL+Q++QE+K N + ++V
Sbjct: 187 NNGYSSKVSELLRKLSPDNEKPPIVQKIYFTSRTHSQLQQLVQEIKKLNNQTFSTPIRVV 246
Query: 125 ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD--- 180
L SR+ LCI+ EV LR SA N C L +G+ +C ++++N L D
Sbjct: 247 SLASRKNLCINNEVRKLRPTSALNEKCIEL--QGSAHKC-------PFLQDNTQLWDFRD 297
Query: 181 ----EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS 236
E +DIE+LV +G+ CPY+ TRE + IV PY L+ R L + K++
Sbjct: 298 EALAEIMDIEELVELGQRLKVCPYYGTREAVDSAQIVTLPYPLLLQESARNALNLTLKDN 357
Query: 237 ILIFDEAHNL-EGICADAASFDLSSGLLTACISEAK 271
I I DEAHNL + IC+ +S S CI+E +
Sbjct: 358 ICIIDEAHNLIDAICSMHSS---SISFRQVCIAETQ 390
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQV 73
P+ YD QL +M + S+ + + ESPTGTGK+L L+CA+L W G
Sbjct: 16 PYTPYDIQLEFMRSLYSSISDGKIGIFESPTGTGKSLSLICASLTWLDEHGGVLL----E 71
Query: 74 NNQISGSQSSVNSSQSGDSKLPTILYTSR-----THSQLRQVIQELKTSNYRPKMVILGS 128
+N+ S S SS+ D L L + TH++L Q ++E++ N K + S
Sbjct: 72 DNEKSNDNKSNTSSKIPDWVLEQDLKIQKDLVKETHARLEQRLEEIRKRNQSRKNQM--S 129
Query: 129 REQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYM 172
HRE +A+ T+ CN+ + D M
Sbjct: 130 NNSTTYHRETKRRNINAE---------ASTSDNCNNSNTSVDPM 164
>gi|159118615|ref|XP_001709526.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
gi|157437643|gb|EDO81852.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
Length = 1059
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 177/357 (49%), Gaps = 53/357 (14%)
Query: 397 VREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE-VGSIILTSGTLSPMDSFAQEL 455
+R+ A + +A + C P ++ E V S++LTSGTL+P + EL
Sbjct: 591 IRKHSATTVPAISSQAGWQVHLLCMTPKSILKTIVLGESVHSLVLTSGTLAPFSALQAEL 650
Query: 456 KLNFPLRVENPHVIT-SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
L+F + V PH++ S ++ I + +G L Y+NR+S Y+++LG + R
Sbjct: 651 GLSFGISVSCPHIVPPSNYLFRAITAI--TGTPLLGIYKNRESKSYQKQLGYALQACVRG 708
Query: 515 VPDGLLIFFPSYYLMDQCIACWK---------NTSHGNLTTIWERICKHKKPVVEPRQSS 565
V G L+FFPSY M Q + WK +++HG +PR
Sbjct: 709 VVGGTLVFFPSYKYMAQVLDSWKADGTEAELKSSTHG-----------------DPRDLF 751
Query: 566 LFPLAIEDYMA---KLKDTSTSG--AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATM 620
+ PL +D A K +D+ +G + F +CRGK++EG+DF+++ R ++ +P+ +
Sbjct: 752 VEPLRQQDCNAVIKKYRDSCDAGRSPILFVICRGKLAEGIDFSNNYCRCALVISLPYPNI 811
Query: 621 TDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYG 680
+DP ++ K ++LD K S L G DWY+ A R+VNQA+GRV+RH+ DYG
Sbjct: 812 SDPLLKAKMDWLD-------------KHSVLKGGDWYSVHAYRSVNQALGRVLRHKDDYG 858
Query: 681 AIIFCDERFAHPSRKSQISLWIQPHIQCYSKFG-----DVVYTLTRFFREERICGST 732
+ D+R++ + Q+S W+ + G + ++ TR F +R S+
Sbjct: 859 CMFLLDQRYSIEISRKQLSGWLADQLVSTELAGTGVQTEKIFAETRAFYSKRTLSSS 915
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 156/353 (44%), Gaps = 82/353 (23%)
Query: 5 KIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
KI+G+ +FPFE Y Q+ YM +I +L K NALLESPTGTGKTL LL +A+++
Sbjct: 6 KIKGVHFQFPFEPYPSQIEYMSSLITALNKKENALLESPTGTGKTLSLLIPAIAYQEQCI 65
Query: 65 SFSTLGSQVNNQ------ISGSQSSVNSSQSG--------------------------DS 92
SF +L + + + I+ + S S DS
Sbjct: 66 SFLSLVTSLLKKCKAGAIIAEPTGAPTLSSSAPLMPPDVGKLLEWTDQTLDFRDSVIIDS 125
Query: 93 KL-----------------PTILYTSRTHSQLRQVIQELK--------TSNYRPKMV--- 124
KL P ILY +RTH+Q+ Q I++LK + + R ++
Sbjct: 126 KLKNIRLNDTARWVAERPPPKILYAARTHAQIEQAIRQLKKHVTISDASGDSRSFLLWPI 185
Query: 125 -ILGSREQLCIHREVSLLRGSAQ---NNACRFLCKKGTNRRCNHHSRVAD---------- 170
+LGSR CI+ +A AC+ LC +R+C ++S D
Sbjct: 186 AMLGSRRIFCINERAHTYAAAANITLGMACKKLCD---DRQCRYYSSDGDSDDLAQKYRE 242
Query: 171 -YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG- 228
Y +N+ D D+ED + + CPY++ R L +V APYNY++ R
Sbjct: 243 YYCENSNGRLD---DLEDFLGYCKNESRCPYYLGRALVPQARVVTAPYNYILSSKNRTSE 299
Query: 229 LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
L +NSIL+ DE HN+ C D S +++ L E + +++ +R
Sbjct: 300 LSSMLRNSILLVDEGHNIGQACCDTFSGSVTTDALLKASEEIQYLQKVAAAQR 352
>gi|307108452|gb|EFN56692.1| hypothetical protein CHLNCDRAFT_57565 [Chlorella variabilis]
Length = 1523
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 150/254 (59%), Gaps = 23/254 (9%)
Query: 419 WCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVI-TSKQIWAG 477
WC NP +A + ++ S++LTSGTL+P++ FA EL F + +E PHV+ +Q+WAG
Sbjct: 569 WCMNPAVAFRPVAQ-AAHSVVLTSGTLAPLEGFASELGTPFAITLEAPHVVDMRRQVWAG 627
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
+V GP G LN++++N++ ++ +G I+ A +PDGLL+F PSY L+D+ +A WK
Sbjct: 628 VVGAGPGGTPLNATWKNQNEAGFQDGVGRLILEGAASIPDGLLVFLPSYVLLDKLMARWK 687
Query: 538 NTSHGNLTTIWERICKHKKPVVEPR---QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
+ + ++ KK V EPR Q +L E Y A + FFAVCRG
Sbjct: 688 ------FSGLLAQLEALKKVVQEPRGGGQDALKKTMQEYYAAIQAGGGAA---FFAVCRG 738
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEGLDFAD R V+I G+PF D KV+ K+ + D + +LS +SG+
Sbjct: 739 KVSEGLDFADGNARGVIIVGIPFPAAKDLKVQEKKAFND---------RGQRQLSLVSGD 789
Query: 655 DWYNQQASRAVNQA 668
WY+QQA RA+NQA
Sbjct: 790 VWYSQQAFRALNQA 803
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 38/208 (18%)
Query: 93 KLPTILYTSRTHSQLRQV-------------------------IQELKTSNYRPKMVILG 127
K P I Y +RTHSQ+ Q ++ELK Y+P+M +LG
Sbjct: 149 KPPKIFYATRTHSQIAQARRRGGLVSGGGGGVLGGGGGAGAVVVKELKRCEYKPRMAVLG 208
Query: 128 SREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRC-NHHSRVADYMKNNPHLGDEPIDIE 186
SR+ CI++ + R + + AC L K+ + N HS V+ + H DIE
Sbjct: 209 SRKHYCINQHAT--RQGSIDEACEELLKESQCQYFKNVHSFVSSGFQYRLH------DIE 260
Query: 187 DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
DL +GR+ CPY+ R+ +++FAPY+YLIDP R+ + V+ + +L+FDEAHN+
Sbjct: 261 DLKGMGRSNKACPYYTARKWADEAEVIFAPYSYLIDPVIRRAMAVDVEGCMLVFDEAHNM 320
Query: 247 EGICADAASFDLSSGLLTACISEAKNCI 274
E +C +AAS ++ A ++E C
Sbjct: 321 EDVCREAASTEVD----LATMAEVLGCF 344
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
MP Y I G V FP +AY QL +M KVI +L+ NALLE+PTG+GKTL LLC+ LAW+
Sbjct: 1 MPNYTIGGCQVHFPHKAYGVQLSFMNKVIAALEGGHNALLEAPTGSGKTLSLLCSALAWQ 60
>gi|339239905|ref|XP_003375878.1| DNA repair helicase family protein [Trichinella spiralis]
gi|316975433|gb|EFV58877.1| DNA repair helicase family protein [Trichinella spiralis]
Length = 810
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 153/633 (24%), Positives = 264/633 (41%), Gaps = 104/633 (16%)
Query: 95 PTILYTSRTHSQLRQVIQELKTSNYRPK--MVILGSREQLCIHREVSLLRGSA-QNNACR 151
P I Y SRTHSQL Q+ QEL S + MV LGSR+ LCI+ V L+ N C
Sbjct: 171 PKIYYCSRTHSQLAQIAQELCKSVHEESTTMVTLGSRQTLCINESVRKLKSVGLMNEKCL 230
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
L K+ + + + H P L + D++++G CPY+ R+ D
Sbjct: 231 DLQKESSKVKKSDHGCSKKKKSKCPFLRRD-----DVLHLGTAVRACPYYACRKSVAAAD 285
Query: 212 IVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
IV PY + R G+ ++I DEAHNL F++ L + +
Sbjct: 286 IVLMPYQMFFNRATRNTCGLSLSECVVIVDEAHNLLETIESMYRFEICFQKLNLAKQQLQ 345
Query: 272 NCIDISSTR--------------------RGQSSDETLNPDNFAILRAL----LLKLEKR 307
I T+ + E+ + FA L + KL +
Sbjct: 346 QYIQRYQTKNLLHLRHFETVLKFSANFLEKAVGKGESYSISEFACLIGIDSINCFKLHEF 405
Query: 308 IAEVPINSKELGFT-KPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKST 366
I + + K GFT + G Y+ + + D ++ + ++ + + + + +K+
Sbjct: 406 IEKSHLCEKLRGFTSRAGKYVSDQMEDFSVG--LFHSIMSYISCFTNKIGDGRFLIEKTL 463
Query: 367 TACRIESI----SNILKIIFRDKGTAHSAYYRVH-VREADANAADVLKGKASRTLSWWCF 421
++ RI I + L+ +F++ + A + + E ++ D+L R + + C
Sbjct: 464 SSSRIIFILLNPAAFLEDVFKEARSVVLAGGTMEPISELNSRLFDILSIPKQRIVQFSCD 523
Query: 422 NPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPV 481
+ S + IIL +G + LK +F R TS I+
Sbjct: 524 HV------VSNKNILPIILHTGPGGNV------LKFDFSSR-------TSAAIF------ 558
Query: 482 GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH 541
QELGN +V +++I+P G++ F PSY + K +
Sbjct: 559 --------------------QELGNCLVQLSKIIPGGIVCFLPSYNYEETVFQYLKKSG- 597
Query: 542 GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY------MAKLKDTSTSGAVFFAVCRGK 595
+ + + K+ EP+ +S + Y ++ +GA FAV GK
Sbjct: 598 -----LLQELAAKKEIFREPKTASDVNSVLSKYADVVMKFGTNNNSEKNGAFLFAVVGGK 652
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGED 655
+SEG++F+D R V++ G+P+ ++ ++++K +YLD ++ +G +
Sbjct: 653 MSEGINFSDALARCVIMVGLPYPDISSSEMKIKMKYLDEHVSNKNSAMN-------AGRE 705
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
+Y +AVNQ++GR IRH+ DY AIIF D R
Sbjct: 706 FYENICFKAVNQSIGRAIRHKDDYSAIIFLDSR 738
>gi|242025010|ref|XP_002432919.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518428|gb|EEB20181.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 852
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 170/330 (51%), Gaps = 53/330 (16%)
Query: 409 KGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP-- 466
K + TL + NP ++ + S+IL GT+ P+ F +L F L +P
Sbjct: 564 KTVGTSTLKFLLLNPASHFEDIVK-NARSVILAGGTMQPISEFTDQL---FYLAGGSPDR 619
Query: 467 -------HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
HV++ + I IVP GP+G + + SY+NR ++E ELG +VNI+ +VP G+
Sbjct: 620 LKVFTCGHVVSKENILPIIVPSGPTGKVFDFSYQNRKNVEILDELGRLLVNISNVVPAGI 679
Query: 520 LIFFPSYYLMDQCIACWKNTS--HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAK 577
+ FFPSY ++N S H T + ++ K KK + EP++++ + DY
Sbjct: 680 VCFFPSYE--------YENFSYQHFEKTGVIMKLLKKKKVLREPKKTNKVDEVLRDYSEA 731
Query: 578 LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
+K T GA+ F+V GK+SEGL+F D GR +++ G+P+ +T+P+++ K YL+
Sbjct: 732 VKKT---GALLFSVVGGKLSEGLNFNDDLGRCIIVVGLPYPNLTNPELKEKMNYLN---- 784
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
+ AVNQ++GR +RH++DY +++ D+RF+ +
Sbjct: 785 -----------------------QTVAVNQSIGRSVRHKNDYASVLLIDQRFSKTKCINA 821
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+ WIQ +Q +FG V+ L FF ++
Sbjct: 822 LPQWIQESLQKGERFGSVIKLLANFFSTKK 851
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 27/197 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---RPKMVILGSREQLCIHREVSLLRG-SAQNNACR- 151
I SRTHSQL Q+++EL+ S Y + ++ L SR+ CI+ V L+ N C+
Sbjct: 207 IFLCSRTHSQLSQLVRELQKSPYNDLKIRVASLASRQNYCINENVLKLKHLPLINEKCQE 266
Query: 152 -----------------FLCKKGTNRRCNH--HSRVADYMKNNPHLGDEPIDIEDLVNIG 192
L ++ N C + HS + D L E +D+E L++ G
Sbjct: 267 LHDKNKSKTTKTSENGEVLKRQKANTGCPYYNHSNIEDLKHT---LLSEILDVEQLLHKG 323
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
F CPY+ +R ++ PYN ++ RK G+ K+S++I DEAHNL +
Sbjct: 324 NKFNGCPYYASRYAVDDAQVIIVPYNTILHDSTRKACGINLKDSVVIIDEAHNLLDAIGN 383
Query: 253 AASFDLSSGLLTACISE 269
S +S L A S+
Sbjct: 384 IYSCSISGYDLAASYSQ 400
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF Y Q M+ + ++L+ K + ESPTGTGK++ L+C +L W
Sbjct: 16 FPFNPYLIQNDLMKNLYEALEGKKLGIFESPTGTGKSMSLICGSLKW 62
>gi|301117338|ref|XP_002906397.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107746|gb|EEY65798.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 819
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 159/322 (49%), Gaps = 25/322 (7%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLR----VENPHVITS 471
+ + NP I QE + S+IL GT+ P+ +L + P HVI
Sbjct: 518 IRFILLNPAIHFQEIVN-KSRSVILAGGTMQPVSQVIDQLFSSIPREHIDLFSCGHVIPP 576
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
K + + GPS L +Y R +E ELG ++N+ RIVP G+++FFPSY +
Sbjct: 577 KNLLGFSLASGPSQKHLEFTYSQRGDMEALDELGRILLNLLRIVPGGIVVFFPSYRFEES 636
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
+ W+ T +E+I K EP++S + Y A S +GAV +V
Sbjct: 637 AVRRWQATKQ------YEQIQAKKAIFSEPKKSDELAEVLMQYSAACS-RSGNGAVLLSV 689
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
GK+SEG++F+D R VV+ GMP+ D ++ K +LD K++
Sbjct: 690 VGGKMSEGINFSDELARCVVMVGMPYPNARDAELVEKMAFLD-------------KITPG 736
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSK 711
SG +Y +AVNQ++GR IRH+ DY I+ D R++ P+ +S++ WIQ +Q +
Sbjct: 737 SGRQFYESLCMKAVNQSIGRSIRHQKDYSTILLVDCRYSSPAVRSRLPEWIQTRVQPPTS 796
Query: 712 FGDVVYTLTRFFREERICGSTN 733
FG V L +FFR + ++N
Sbjct: 797 FGQVYSQLVQFFRAKENQAASN 818
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 91 DSKLPTILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ-N 147
D + I+Y SRTHSQ+ Q ++E++ + + ++V LGSR+ LC + +V+ L +
Sbjct: 170 DIGVVKIIYCSRTHSQISQFVREIRKTAFADHIRVVSLGSRKNLCTNPKVTKLSSDLRMT 229
Query: 148 NACRFLCKKGTNRRCNHHSRVADYMKNN-PHLGDEPI----DIEDLVNIGRTFGPCPYFM 202
+ C + + G + ++ Y K H D + DIEDL +G C Y+
Sbjct: 230 DKCLDMMQSGKTKNGKKVAKCPFYEKELLGHYKDYALAHVQDIEDLHTLGDEMSICSYYG 289
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
TRE IV PY+ L+ R+ LG+ +++I+IFDEAHN+
Sbjct: 290 TRESIPLAQIVTVPYSMLLSKDTRETLGIALEDNIVIFDEAHNI 333
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y QL M ++ +L+ + ESPTGTGK++ L+C L W
Sbjct: 8 FPYDPYSIQLELMRQIWATLEQGHCGIFESPTGTGKSISLICGALTW 54
>gi|253742830|gb|EES99497.1| TFIIH basal transcription factor complex helicase subunit [Giardia
intestinalis ATCC 50581]
Length = 1060
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 167/329 (50%), Gaps = 40/329 (12%)
Query: 390 SAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE-VGSIILTSGTLSPM 448
S + + + A+AA L + + C P ++ E V S+ILTSGTL+P
Sbjct: 585 SEFLNNFIEKRSADAASALPSQTGWQVHLLCMTPQSILKTIIMGERVRSVILTSGTLAPF 644
Query: 449 DSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTI 508
+ EL L F + + PH++ S ++ G +G L +Y +R+S Y++ LG +
Sbjct: 645 SALQAELGLPFGVSISCPHIVPSSNYLFRVI-TGTTGAPLLGTYTHRESGSYQRLLGYAL 703
Query: 509 VNIARIVPDGLLIFFPSYYLMDQCIACWK---------NTSHGNLTTIWERICKHKKPVV 559
R V G L+FF SY M Q + WK + +HG+ ++ V
Sbjct: 704 QVCVRGVIGGTLVFFSSYKYMAQVLDSWKTDGTEAALRSGAHGDSRDLF----------V 753
Query: 560 EPRQSSLFPLAIEDYMAKLKDTSTSGA--VFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
EP + + ++ Y KD+ +G + F VCRGK++EG+DF+++ R ++ +P+
Sbjct: 754 EPVRQQDCDIVVKKY----KDSCNAGGCPILFVVCRGKLAEGIDFSNNYCRCALVISLPY 809
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
++DP ++ K ++LD K S L G DWY+ A R+VNQA+GRV+RH+
Sbjct: 810 PNISDPLLKAKMDWLD-------------KHSALKGGDWYSVHAYRSVNQALGRVLRHKD 856
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHI 706
DYG + D+R++ + + Q+S W+ H+
Sbjct: 857 DYGCMFLLDQRYSTEASRKQLSGWLADHL 885
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 157/357 (43%), Gaps = 85/357 (23%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
T +I+G++ +FPFE Y Q+ YM +I +L K NALLESPTGTGKTL LL LA+++
Sbjct: 4 TLRIKGVEFQFPFEPYPSQIEYMNSLITALNGKENALLESPTGTGKTLSLLIPALAYQER 63
Query: 63 LGSFSTLGSQVNN------------QISGSQSSVNSSQSG-------------------- 90
SF +L + + +I + S+++ S +G
Sbjct: 64 CISFLSLANSLERRHKTSTNMSEFIKIQNAPSNISLSHAGAKELLEWACQTFDFRDCVAM 123
Query: 91 DSKL-----------------PTILYTSRTHSQLRQVIQELK-------------TSNYR 120
D++L P ILY +RTH+Q+ Q I++LK S+
Sbjct: 124 DARLGTMSLNSTARWVVEQPPPKILYAARTHAQIEQAIKQLKKHVEVISSVPADTNSSLS 183
Query: 121 PKMVILGSREQLCIHREVSLLRGSAQ---NNACRFLCKKGTNRRCNHHSRVAD------- 170
+ +LGSR CI+ +A + AC+ +C +R+C ++ D
Sbjct: 184 WPIAMLGSRRVFCINERTHTYAAAANITLDMACKKVCD---DRQCRYYFGEGDGEAVAQK 240
Query: 171 -----YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y +N L D +ED + + CPY++ R L I+ PYNY++
Sbjct: 241 YRQYYYEGSNERLDD----LEDFLGYCKNESRCPYYLGRALVPQAKIITTPYNYILSSKS 296
Query: 226 RKG-LGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRR 281
R L NSIL+ DE HN+ C D S ++ L +E + I +T+R
Sbjct: 297 RTAELCDMLNNSILLIDEGHNIGQACCDVFSSSIAVNTLLEATNEIRYLQKIVTTQR 353
>gi|300123499|emb|CBK24771.2| unnamed protein product [Blastocystis hominis]
Length = 261
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 143/259 (55%), Gaps = 15/259 (5%)
Query: 448 MDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNT 507
M+ E ++ +EN HVI Q+ V L+SSY+ R + K+E+ +T
Sbjct: 1 MNPLISEFQIPISNVLENMHVINDSQLMVVTVDRSIHNIPLSSSYQARQNSILKEEIIDT 60
Query: 508 IVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLF 567
I+ +P ++IFFPSY +++C A W+ G L ++ + KPV R+ S
Sbjct: 61 ILFFLPSIPGNVIIFFPSYSYLNECYASWEQ--QGKLDSL-----RSVKPVY--REESKM 111
Query: 568 PLAIEDYMAKL--KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKV 625
A + K K GAV AVCRGK SEG+DF+D R V+ITG+P+ T+TD KV
Sbjct: 112 TNAQFGEVVKFLQKAVYERGAVLLAVCRGKASEGIDFSDAMCRCVIITGIPYPTLTDRKV 171
Query: 626 RLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFC 685
++R+YLD + +Q + E SG DWY A RAVNQ++GRVIRH++D+G I+
Sbjct: 172 IMRRQYLD-ERNAQQRAFNERP---FSGNDWYTISAYRAVNQSIGRVIRHKNDFGVILLM 227
Query: 686 DERFAHPSRKSQISLWIQP 704
DERF + +S W+QP
Sbjct: 228 DERFGSRDSERYLSRWMQP 246
>gi|390602956|gb|EIN12348.1| DNA repair helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 868
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 159/328 (48%), Gaps = 21/328 (6%)
Query: 410 GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-----KLNFPLRVE 464
G + + + NP +E ++IL GT+SPM + +L N LR
Sbjct: 550 GHDTVVVRYQQLNPSTHFKEVVDT-ARTVILAGGTMSPMSDYVTQLFPQIKSDNLMLRTY 608
Query: 465 NPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
H++ + I +V GP G + +R ELG + N+ I P G++IFFP
Sbjct: 609 G-HIVPASNIQTVVVSKGPRGNDFEFKFASRRDPLAIAELGQALSNLINITPGGMVIFFP 667
Query: 525 SYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK--DTS 582
SY +D A W+ + L W KK EP+ +S + DY + + D S
Sbjct: 668 SYAFLDSAKASWRES---GLLAKW---TTKKKVHYEPQSASEVETVLRDYASDISRIDPS 721
Query: 583 TS---GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
TS GA+ AV K+SEGL+FAD R VVI G+PFA + P+++ + +Y++ +
Sbjct: 722 TSKKQGAILLAVVGAKLSEGLNFADDLARCVVIVGLPFANLDSPELKERMKYVNSLETAN 781
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
GG+ K + + Y AVNQ++GR IRHR D+ +I+ D R++ P +S++
Sbjct: 782 GGKASGAKDA---AHELYENMCMNAVNQSIGRAIRHRADWASIVLLDRRYSSPRIRSKLP 838
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFFREER 727
W+ FG V+ ++ F+R +R
Sbjct: 839 KWLGDSTVVPQTFGQVIKEMSLFYRNKR 866
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 46/194 (23%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP----------------------------------- 121
+ Y SRTHSQL Q+I EL+ RP
Sbjct: 195 VYYASRTHSQLSQIIPELRKLKLRPASNQRNDRPRSHHPISTTDATSKRKSSEDEPENEE 254
Query: 122 -----KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP 176
+ + LGSR+QLCI+ E+ + + + ACR L + ++RC + + D + P
Sbjct: 255 LVTHVRSLSLGSRKQLCIYDELRS-KTTDIDEACRTLLSEKGDKRCPYLPAIDDNTRI-P 312
Query: 177 HLGD----EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVE 232
L D P+DIEDL N GR CPYF +R +V PYN L+ R+ LG++
Sbjct: 313 KLRDIILSSPMDIEDLANAGRRHETCPYFGSRSAIPQSQLVLLPYNLLLHRSAREALGID 372
Query: 233 WKNSILIFDEAHNL 246
K+ +++ DEAHNL
Sbjct: 373 LKDQVVVIDEAHNL 386
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 13 FPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y Q M+ + L+++ + ++ES T TGKTL LLCATL+W
Sbjct: 14 FPYQPPYPNQQELMKHLYSVLEHRRHTIVESRTSTGKTLVLLCATLSW 61
>gi|157123196|ref|XP_001660054.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|108874458|gb|EAT38683.1| AAEL009438-PA [Aedes aegypti]
Length = 873
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 160/316 (50%), Gaps = 25/316 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE---NPHVITS 471
T+ + NPG QE SIIL GT+ P++ ++L P RV+ HV+ +
Sbjct: 572 TMKYLLLNPGARFQEILS-SCRSIILAGGTMQPVEELTEQLFKTCPERVQIRSYRHVVPA 630
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ + GPSG L +Y NR + + EL + + N+ ++VP G+++FF SY +DQ
Sbjct: 631 DAVLPLAIAKGPSGKELLFNYGNRQNKDLLNELSSVLANLCQVVPHGVVVFFSSYDYLDQ 690
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY--MAKLKDTSTSGAVFF 589
+ T L + ER K+ EPR S+ + DY A+ S +GA+
Sbjct: 691 FYRHLQQTDR--LAKLEER----KRVFREPRGSAQVDKILADYSKAARQWTGSQTGALML 744
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
+V GK+SEGL+F+D GR VV+ G+P+ T P++ + YLD Q
Sbjct: 745 SVVGGKLSEGLNFSDELGRCVVVVGLPYPNRTSPELVERMRYLDRTLQPP---------- 794
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR-KSQISLWIQPHIQC 708
+G ++Y +AVNQ +GR +RH DY +++ D R+ + + ++ +WI +QC
Sbjct: 795 --AGNEYYENLCMKAVNQCIGRAVRHIKDYASVVLLDVRYGSSEKIRKKLPVWISEGMQC 852
Query: 709 YSKFGDVVYTLTRFFR 724
++G +L RFF+
Sbjct: 853 VERYGQAHGSLVRFFK 868
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 23/171 (13%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ-NNACRFL 153
+++ SRTHSQL QV++E++ + + + ++ + SR+ CI+ EV LR + N C L
Sbjct: 201 VIFCSRTHSQLGQVVEEVRRTEFGKQIRLTTIASRQNFCINPEVRRLRSNPLINERCLEL 260
Query: 154 CKKG-----------------TNRRCNHHSRVA-DYMKNNPHLGDEPIDIEDLVNIGRTF 195
KK +++C+ ++R A + +KN+ E DIE+LV +
Sbjct: 261 QKKSGKATVVDEDQNARKKRKISQKCSFYNRQAIEDLKNDSLF--EVQDIEELVTFAKQE 318
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
CPY+ +R ++ PY L+ R+ G++ N+++I DEAHNL
Sbjct: 319 KACPYYASRAAIPDSQLLMIPYQNLLHRRTREQTGIDISNAVIIIDEAHNL 369
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 8 GIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
G +FPF Y QL M + +++N+ + ESPTGTGK+L L C L+W
Sbjct: 14 GDGFQFPFATPYSIQLDLMRSLYSTVENRQVGIFESPTGTGKSLTLTCGVLSW 66
>gi|170029991|ref|XP_001842874.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|167865334|gb|EDS28717.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 873
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 32/326 (9%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGS---IILTSGTLSPMDSFAQELKLNFPLRVE---NPHV 468
T+ + NPG + +GS IIL GT+ P+D ++L + RVE HV
Sbjct: 572 TMKYLLLNPGARFGDI----LGSCRSIILAGGTMHPIDELTEQLFKDCAERVEIRSYRHV 627
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ + + + GPSG L +Y NR + E EL + + N+ ++VP G++ FF SY
Sbjct: 628 VPADAVLPLAIGKGPSGKELLFNYANRQNKELLNELSSVLANLCQVVPHGIVCFFASYDY 687
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVF 588
+DQ A + ++G L I ER K+ EPR ++ + +Y + SGA+
Sbjct: 688 LDQFYATIQ--TNGRLDRITER----KRVFREPRGTTNVDSILAEYAQAARH---SGALM 738
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKL 648
+V GK+SEGL+FAD GR VV+ G+P+ T P++ + YLD L
Sbjct: 739 LSVVGGKLSEGLNFADELGRCVVVVGLPYPNRTSPELAERMRYLD------------RTL 786
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR-KSQISLWIQPHIQ 707
+G ++Y +AVNQ +GR +RH DY +++ D R+ R + ++ +WI +Q
Sbjct: 787 KPPAGNEYYENLCMKAVNQCIGRAVRHIRDYASVVLLDSRYGTSERIRKKLPVWIADGLQ 846
Query: 708 CYSKFGDVVYTLTRFFREERICGSTN 733
C ++G +L +FF+ + I + N
Sbjct: 847 CTERYGQAHGSLVKFFKGKAIHDAVN 872
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 93/174 (53%), Gaps = 26/174 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSA--------- 145
+++ SRTHSQL QV+ E++ + + + ++ ++ SR+ LCI++EV L+ +
Sbjct: 197 VIFCSRTHSQLSQVVNEVRRTEFGKQIRLTMIASRQNLCINQEVRKLKTNTLVNERCLEM 256
Query: 146 QNNACRFLCKK------------GTNRRCNHHSRVA-DYMKNNPHLGDEPIDIEDLVNIG 192
Q N+ + CK + ++C ++R A + +KNN E DIE+LV+
Sbjct: 257 QKNSGKATCKDEDGNVSKKRKVSSSAQKCPFYNREAIEELKNNSLF--EVQDIEELVSFA 314
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+ CPY+ +R ++ PY L+ R+ G++ KN+++I DEAHNL
Sbjct: 315 KQEKACPYYASRAAVGDTQLLMVPYQNLLHRKTREQTGLDIKNAVIIVDEAHNL 368
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 8 GIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
G FPF YD QL M + ++ + ESPTGTGK+L L C L+W
Sbjct: 15 GSQFSFPFPPYDIQLDLMRSLYTVVERGQVGIFESPTGTGKSLTLTCGVLSW 66
>gi|313237854|emb|CBY12985.1| unnamed protein product [Oikopleura dioica]
Length = 479
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 225/509 (44%), Gaps = 83/509 (16%)
Query: 209 TVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACIS 268
+VDI+ APYNY+ D K +E +N IL+ DEAHN E + SF
Sbjct: 3 SVDILVAPYNYITDNSASK---IELENKILVIDEAHNFEQLLESTGSFS----------- 48
Query: 269 EAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIY 328
I+S QS DE +FA +L R + K + K
Sbjct: 49 -------ITSNDLAQSYDEV----SFAEHDVFCKELADRSRSLRWILKVIDTIKA----- 92
Query: 329 ELLADLNITQETA---YKLIDIVEV---AAELLQEDKLQNKKSTTACRIESISNILKIIF 382
EL N ++ A K+ +I+EV A + ++ N S + S + L
Sbjct: 93 ELENHANQSESDASYQLKIDEIIEVFVKAEAFFIQSEVWNAVSAELNKYYSKPSTLS--- 149
Query: 383 RDKGTAHSAYYRVH-------VREAD--------ANAADVLKGKASRTLSWWCFNPGIAM 427
+ T + Y VH VR+ D + + A L + P I M
Sbjct: 150 --RMTGDNFGYFVHLISELEMVRKDDLCECYGVTISVGRIDDETAKMKLKLFNLEPKIGM 207
Query: 428 QEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP-----LRVENPHVITSKQIWAGIVPVG 482
+ + + +II TSGTLSP++ +A+ L L+ + + N HVI +Q++ V
Sbjct: 208 NKIEKNNLYNIICTSGTLSPVEDYARLLNLDHNGEREVVLLSNSHVIDKEQLFVATVANR 267
Query: 483 PSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHG 542
+ LN Y NR++ + ++ ++A P G L F +Y M+ C WK
Sbjct: 268 ENIEFLNV-YANRENRQMHTAYRQSLADLANCAPAGTLFFHSTYSQMESCETNWKYF--- 323
Query: 543 NLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL-KDTSTSGAVFFAVCRGKVSEGLD 601
L+ HKK E R + +E + ++ K+ T A+ V GK SEG++
Sbjct: 324 -LSEF------HKKMYFESRSQKSTAMTVESFRKEIAKENGT--AILNCVISGKCSEGVN 374
Query: 602 FADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQA 661
F D GR VI G+P+ DP++ KR YLD +++ G +SG WY A
Sbjct: 375 FTDDLGRLSVICGIPYPPKNDPRIIQKRAYLDNLVRTKKGS--------ISGAQWYTINA 426
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERFA 690
SRAV+QA+GR+IRH++D+G+IIF D RF
Sbjct: 427 SRAVSQAIGRIIRHKYDFGSIIFMDRRFG 455
>gi|193608349|ref|XP_001949260.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Acyrthosiphon pisum]
Length = 890
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 164/321 (51%), Gaps = 32/321 (9%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP-------LRVENPH 467
L + NP + +E + S+I++ GT+ P+ F +L NF + H
Sbjct: 582 VLKFLLLNPAVHFKEIVD-KARSVIVSGGTMEPISEFKDQL-FNFNGDNSDRIMHFSCGH 639
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
V+ I IV GP+G + SY+ R SI+ E+G+ + NI R VP G++ FFPSY
Sbjct: 640 VVPPDHILPLIVCSGPTGKQFDFSYQERTSIKMLNEIGSLLENICRTVPAGIVCFFPSYD 699
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST---- 583
+Q + + + + R+ + KK EP+ ++ +++Y + TS
Sbjct: 700 -YEQFVYQYLEKN-----KVINRLSERKKLFREPKSTNQVDEVLKNYSQAITTTSVLNSK 753
Query: 584 -SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGE 642
+GA+ F+V GK+SEGL+F+D GR V++ G+P+ + +++ K YL+
Sbjct: 754 VTGALLFSVIGGKLSEGLNFSDDLGRCVIVIGLPYPNIKSLELQQKMNYLN--------- 804
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+ + +G+ Y +AVNQ++GR +RH+ DY A++ D R+ S ++ + W+
Sbjct: 805 ---SHMGLGTGQQHYENLCMKAVNQSIGRSVRHQQDYAAVLLLDHRYQRDSVRNALPKWL 861
Query: 703 QPHIQCYSKFGDVVYTLTRFF 723
QP +Q +SKFG L +FF
Sbjct: 862 QPSLQEHSKFGSAFAQLNKFF 882
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 22/195 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKMVI-LGSREQLCIHREVSLLRG-SAQNNACRFLC 154
I + SRTHSQL Q + ELK S Y +I L SR+ CI+R V L+ + N C +
Sbjct: 208 IYFCSRTHSQLSQFVAELKKSPYSTSRIIPLASRQNYCINRTVKKLKNITLMNERCLEMG 267
Query: 155 KKGTNRRCNHHSRVADYMKNN--------PHLGDEPI------------DIEDLVNIGRT 194
K ++ S V +K P+ + I D+E+LVN G
Sbjct: 268 KPKPTQKPTKVSSVGSVVKKKKTEPICKCPYNDKDKIQSLAEEVTIELRDMEELVNRGDQ 327
Query: 195 FGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAA 254
CPY+ +RE K IV PYN L+ R+ G+ + +I I DEAHNL
Sbjct: 328 ISACPYYASRESVKYAQIVTLPYNTLLHKSTREASGIRLEGNIFIIDEAHNLLDTIGHIH 387
Query: 255 SFDLSSGLLTACISE 269
S ++ LT S+
Sbjct: 388 SSQINGQQLTHSYSQ 402
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF Y Q +M ++ +++ + + ESPTGTGKTL ++C + W
Sbjct: 24 FPFTPYGIQHDFMTEIYSAIEGRKLGIFESPTGTGKTLSIICGAVRW 70
>gi|270006445|gb|EFA02893.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Tribolium
castaneum]
Length = 817
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 179/696 (25%), Positives = 294/696 (42%), Gaps = 152/696 (21%)
Query: 95 PT-ILYTSRTHSQLRQVIQELKTSNYRPKMVI--LGSREQLCIHREVSLLRG-SAQNNAC 150
PT I SRTHSQL Q I E+ S + + + L SR+ CI+ V+ L+ S N C
Sbjct: 173 PTKIFICSRTHSQLSQFIGEILKSPFGKNIRVASLASRQNYCINPNVNKLKNNSLINEKC 232
Query: 151 RFLCK----------------KGTNRRCNHH--SRVADYMKNNPHLGD----EPIDIEDL 188
+ K +GT +C ++ S + D L D E D+EDL
Sbjct: 233 LDMQKQSKSQKDADGKTIKKPRGTTTKCPYYKQSTIED-------LKDLTLTEVQDVEDL 285
Query: 189 VNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEG 248
V G+ CPY+ +R + ++V PYN ++ R+ G++ K++++I DEAHNL
Sbjct: 286 VKSGKELNACPYYSSRLAAEDAEVVLVPYNTILHKATREANGIDLKDNVIIIDEAHNLLE 345
Query: 249 ICADAASFDLS-----SGLL-TACISE-------AKNCIDISS-----TRRGQSSDE--- 287
S +L+ GLL C + A N + I+ T+ Q D+
Sbjct: 346 AMGQMYSSELTYSQIDQGLLQVKCYKQRFNTRFSAPNLLLINQLIFVITKLQQLLDQNSE 405
Query: 288 -------------TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADL 334
T DNF + R + + RIA+ K Y + D
Sbjct: 406 EKTDVFTIENFVLTAKIDNFNMFRLVKFCKDGRIAQ-----------KVRSYALKYPFDK 454
Query: 335 NITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIE-----SISNILKIIFRDKGTAH 389
+I ++ A K + + L + NK T IE +++N L I T
Sbjct: 455 SIIEKPAKKGV------KDFLSS--ITNKNETVEQNIEKPAAFALTNPLLAIISFLETLT 506
Query: 390 SAYY--RVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSP 447
+Y R+ V + K+ L + NP ++ +L S+I+ GT+ P
Sbjct: 507 YSYKDGRIFVHTN--------QDKSKIKLQFLLLNPTQNFEDIVKL-ARSVIVCGGTMKP 557
Query: 448 MDSFAQELKLNFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI--- 498
+ F L ++ + E H+I + I I+ G + L ++ R S+
Sbjct: 558 NEEFRNRLFISSGVSPERIFEFSCGHIIPPENILPVIMTEGANKEKLLFNFERRMSMVCT 617
Query: 499 -------EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERI 551
EY +L +V G+++FFPSY + K+ S G L
Sbjct: 618 PVTVPSTEYSTDL---------VVKGGIVVFFPSYNYENWVWQQIKDVSFGRLV------ 662
Query: 552 CKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVV 611
EP+ S ++ Y + S SGA+ +V GK+SEGL+F+D GR V+
Sbjct: 663 ------FREPQDSGSVDSVLKSYSDAVH-KSNSGALLLSVVGGKLSEGLNFSDDLGRCVI 715
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
+ G+P+A +T P ++ K +LD + + G +G+ +Y +AVNQ++GR
Sbjct: 716 VVGLPYANITAPDLKEKMSHLD-KIEGSG-----------AGKRFYESLCMKAVNQSIGR 763
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+RH++DY I+ DER+ + K + WI+ ++
Sbjct: 764 AVRHKNDYATILLLDERYNRTATKEALPDWIKKSLK 799
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
+ EFPF+ Y Q +M + + ++NK + ESPTGTGK+L +LC + W K
Sbjct: 6 NFEFPFQPYPIQHAFMRNLFEVIENKKFGIFESPTGTGKSLSILCGAIRWLK 57
>gi|66362610|ref|XP_628271.1| RAD3'DEXDc+HELICc protein' [Cryptosporidium parvum Iowa II]
gi|46229591|gb|EAK90409.1| RAD3'DEXDc+HELICc protein' [Cryptosporidium parvum Iowa II]
Length = 841
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 209/863 (24%), Positives = 342/863 (39%), Gaps = 215/863 (24%)
Query: 1 MPTYKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M + I ++V FP++ Y QL YM+ + Q L + +LE PTGTGKT+ LL
Sbjct: 1 MVRFFIEELEVFFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLL------ 54
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SN 118
S + S Q + ++Y +RT +++ + +QELKT +
Sbjct: 55 ----------------------SFITSYQLVHPNMGKLIYCTRTVAEMEKALQELKTVVD 92
Query: 119 YRPKMV-------------------------------ILG----SREQLCIHREVSLLRG 143
Y K + ILG +R +CI+ VS+
Sbjct: 93 YCKKEIENDKIKLEQEIKSENNSSLASVSESRFSAASILGIGMTARRNMCINPRVSVHAD 152
Query: 144 SAQ-NNACRFLCKKGTNRRCNHHSRVADYMKN---NPHLGDEPIDIEDLVNIGRTFGPCP 199
+ ++ CR + + +R + N E DIE+++ G T CP
Sbjct: 153 RDKIDSMCRSMTAPWVRAKHQMEARERSALSEGDANSSKMTEIADIEEMLESGCT-TLCP 211
Query: 200 YF--------------------------------------------MTRELQKTVDIVFA 215
Y+ ++ L +T +V
Sbjct: 212 YYEAYERVWSSDLVPTGIYTIDEFKDFSKNWEHPILGKKIQFCPYFASKRLIQTAKVVVL 271
Query: 216 PYNYLIDP---------------WFRKG-------LGVEWKNSIL------------IFD 241
Y Y++DP F G LG ++ S+L +FD
Sbjct: 272 NYQYILDPKVAQASLLGGGTVSQGFSHGANPNGLSLGSKFAASLLPEQEGTKEPSVVVFD 331
Query: 242 EAHNLEGICADAASFDLSSGLLTACI-------SEAKNCIDISSTR-------------- 280
EAHN++ +C +A S +++ +L+ SE ++ + R
Sbjct: 332 EAHNIDNVCIEALSVNMNRQILSGAARNLRTLKSEIESLSSLDEQRLQDEYTRLIQGLRN 391
Query: 281 RGQSSDETLNPD--NFAILRALLLKLEKRIAEVPINSKELGFT---KPGPYIYELLADLN 335
GQ DE + D F +L + K++K + I E T K Y+ E + +
Sbjct: 392 SGQVQDEAVLEDLERFPVLPEEMEKIKKGLIPGSIRRAEHFITIMKKLILYLQEYIRVYS 451
Query: 336 ITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK---------- 385
E + +E A+ +Q L+ R+ S+ N L+I+ D+
Sbjct: 452 TRIEGPLTFVKHIE-ASCYIQSGLLKFCDE----RLRSLLNTLRIVDSDQYSSLELVCTF 506
Query: 386 GTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTL 445
T +Y + + D + G + C + IAM+ + SI+LTSGTL
Sbjct: 507 FTILGSYSKGFIVIVDPYPE--VSGLYDPVIQLSCLDSSIAMRPILK-RYQSIVLTSGTL 563
Query: 446 SPMDSFAQELKLNFPLRVENPHVITSKQ-IWAGIVPVGPSGYLLNSSYRNRDSIEYKQEL 504
SP+D + + L P+ ++ + + I IV G L+S + +R + +Q
Sbjct: 564 SPLDLYPKLLGF-IPVVSQSLTMTLDRTCICPLIVTRGSDQTPLSSKFESRADVSIQQNY 622
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQS 564
G I+ I + VPDG++ FF SY M+Q ++ W + G L I E HK VE +
Sbjct: 623 GKLILEITKKVPDGVVCFFSSYLYMEQMLSQWYES--GLLAQIME----HKLVFVETKDI 676
Query: 565 SLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
LA+ Y K D GA+FF++ RGKV+EG+DF H GR VV+ G+P+
Sbjct: 677 VSTTLALHHY-RKACDIG-RGAIFFSIARGKVAEGIDFDRHYGRCVVMVGIPYQYTLSKI 734
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
++ + +L Q E+ L+F A R +Q VGRVIR + DYG +IF
Sbjct: 735 LQSRLSFLKENYGIQENEF----LTF---------DAMRQASQCVGRVIRSKADYGLMIF 781
Query: 685 CDERFAHPSRKSQISLWIQPHIQ 707
D R+ ++ +I WI H++
Sbjct: 782 ADLRYNKKDKREKIPPWILKHLK 804
>gi|259485564|tpe|CBF82692.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_3G05590)
[Aspergillus nidulans FGSC A4]
Length = 841
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 167/328 (50%), Gaps = 17/328 (5%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP----HVITS 471
L + +P +E + ++IL GT+SPM + L P N HVI S
Sbjct: 518 LHYMLLDPTNHFREIVE-DARAVILAGGTMSPMSDYLNHLFSYVPKDRLNTFSYGHVIPS 576
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ + A + G +G + +Y RD+ + +LG T + R +PDG++ FFPSY + +
Sbjct: 577 ENLTAHTLARGVTGCEFDFTYAGRDAEKMILDLGRTFTQLCRAIPDGIVAFFPSYEYLSR 636
Query: 532 CIACWKN-TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVF 588
+ WKN N T++E + K K+ + E R++ L +D + +T GA+
Sbjct: 637 VLNIWKNAVVRENKQTLYETVEKEKQILYESRETEL---TTDDLLNNYANTINKGRGALL 693
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET-- 646
+V GK+SEG++F+D GR V+I G+PF + P + K +Y++ +A G E
Sbjct: 694 LSVVGGKLSEGINFSDKLGRGVLIVGLPFPNIRSPVWQAKIKYIEQKAYRNVGSGSEESR 753
Query: 647 KLSF-LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPH 705
+LS +G D+Y RAVNQ +GR IRHR+DY AI+ D+R+ S ++++ WI+
Sbjct: 754 RLSAKAAGRDFYENACMRAVNQCIGRAIRHRNDYAAIVLIDKRYGKTSIEAKLPGWIKQS 813
Query: 706 IQCYSKFGDVVYTLTR---FFREERICG 730
+ S TL FFR + CG
Sbjct: 814 LVKDSALLPAATTLDGLACFFRSKNHCG 841
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 97 ILYTSRTHSQLRQVIQELK--------------------TSNYRPKMVILGSREQLCIHR 136
I Y SRTHSQL Q EL+ R K + LGSR+ LCI+
Sbjct: 197 IFYCSRTHSQLMQFASELRRVTMPSTLPESLRQGLTDEEEQGERIKHISLGSRKNLCINS 256
Query: 137 EVSLLRG-SAQNNACRFLCKKGTNR--RCNHHSRVADYMKN---NPHLGDEPIDIEDLVN 190
V+ L +A N C L + T RC++ D K H DIEDL
Sbjct: 257 RVAALGNPTAINERCLELQQPNTPAPLRCSYLPTEEDEAKTLSFRDHALATVKDIEDLGK 316
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+G+ G CPY+ +R + + R L + K ++I DEAHNL
Sbjct: 317 LGKKLGLCPYYASRGVVSHS-----------ERSARDALNLSIKGHVVIIDEAHNL 361
>gi|67525973|ref|XP_661048.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
gi|40743798|gb|EAA62984.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
Length = 994
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 169/331 (51%), Gaps = 17/331 (5%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP----HVITS 471
L + +P +E + ++IL GT+SPM + L P N HVI S
Sbjct: 518 LHYMLLDPTNHFREIVE-DARAVILAGGTMSPMSDYLNHLFSYVPKDRLNTFSYGHVIPS 576
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ + A + G +G + +Y RD+ + +LG T + R +PDG++ FFPSY + +
Sbjct: 577 ENLTAHTLARGVTGCEFDFTYAGRDAEKMILDLGRTFTQLCRAIPDGIVAFFPSYEYLSR 636
Query: 532 CIACWKN-TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVF 588
+ WKN N T++E + K K+ + E R++ L +D + +T GA+
Sbjct: 637 VLNIWKNAVVRENKQTLYETVEKEKQILYESRETEL---TTDDLLNNYANTINKGRGALL 693
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET-- 646
+V GK+SEG++F+D GR V+I G+PF + P + K +Y++ +A G E
Sbjct: 694 LSVVGGKLSEGINFSDKLGRGVLIVGLPFPNIRSPVWQAKIKYIEQKAYRNVGSGSEESR 753
Query: 647 KLSF-LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPH 705
+LS +G D+Y RAVNQ +GR IRHR+DY AI+ D+R+ S ++++ WI+
Sbjct: 754 RLSAKAAGRDFYENACMRAVNQCIGRAIRHRNDYAAIVLIDKRYGKTSIEAKLPGWIKQS 813
Query: 706 IQCYSKFGDVVYTLTR---FFREERICGSTN 733
+ S TL FFR + CG+ +
Sbjct: 814 LVKDSALLPAATTLDGLACFFRSKNHCGTVD 844
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 97 ILYTSRTHSQLRQVIQELK--------------------TSNYRPKMVILGSREQLCIHR 136
I Y SRTHSQL Q EL+ R K + LGSR+ LCI+
Sbjct: 197 IFYCSRTHSQLMQFASELRRVTMPSTLPESLRQGLTDEEEQGERIKHISLGSRKNLCINS 256
Query: 137 EVSLLRG-SAQNNACRFLCKKGTNR--RCNHHSRVADYMKN---NPHLGDEPIDIEDLVN 190
V+ L +A N C L + T RC++ D K H DIEDL
Sbjct: 257 RVAALGNPTAINERCLELQQPNTPAPLRCSYLPTEEDEAKTLSFRDHALATVKDIEDLGK 316
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+G+ G CPY+ +R + + R L + K ++I DEAHNL
Sbjct: 317 LGKKLGLCPYYASRGVVSHSERS-----------ARDALNLSIKGHVVIIDEAHNL 361
>gi|383850034|ref|XP_003700633.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Megachile rotundata]
Length = 861
Score = 166 bits (419), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 171/320 (53%), Gaps = 29/320 (9%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF---PLRVEN---PHVI 469
+ ++ NP + + + ++IL GT++PM+ F ++L + P R+ HV+
Sbjct: 558 IKFFLLNPAAHFHDIVQ-DSRAVILAGGTMAPMNEFTEQLFIAAGAAPERIVTFSCDHVV 616
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ I I GP+G +Y+NR +I+ ELG ++N+ IVP G+++F PSY
Sbjct: 617 PKENIICSIATHGPTGVEFEFNYQNRQNIKLMDELGRALLNVCNIVPAGIVVFLPSYNFE 676
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD--TSTSGAV 587
+ +K+ + T +I K EP+ +S +E Y A ++ + +G++
Sbjct: 677 E---LVYKHLEKSGIIT---KISAKKHVFREPKSTSQVNEILEQYAAHIEKPRSPQNGSL 730
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
F+V GK+SEGL+F+D+ GR +++ GMP+ + P+++ K +YL+ ++
Sbjct: 731 LFSVVGGKLSEGLNFSDNLGRCIIVVGMPYPNIKSPELQEKMKYLNENVKAD-------- 782
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+G++ Y +AVNQ +GR IRH +DY +I D+R+++ ++ + WIQ +
Sbjct: 783 ----AGQNLYENSCMKAVNQCIGRAIRHINDYSTVILLDKRYSNKTKA--LPQWIQRALI 836
Query: 708 CYSKFGDVVYTLTRFFREER 727
++ FG ++ + +FF +++
Sbjct: 837 IHNNFGSMIGAMAKFFSKKK 856
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLR-GSAQNNACRFL 153
I + SRTHSQL Q I+ELK S Y + V L SR+ CI++ V L+ + N C L
Sbjct: 198 IFFCSRTHSQLSQFIRELKKSPYSKNVSVVPLASRQNYCINKNVRKLKHQNLINEQCLQL 257
Query: 154 CKKGT---NRRCNHHSRVAD---YMKNNPHL--GDEPI---DIEDLVNIGRTFGPCPYFM 202
KK + + +VA +M N L G+ I DIE++V G + C Y+
Sbjct: 258 QKKKATVKDEKDVKRKKVATSCPFMPGNQDLLIGETLIEIQDIEEIVQKGEDYKTCAYYA 317
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
R+ T ++ PYN ++ R G+ K +ILI DEAHNL
Sbjct: 318 ARKAVPTGQLILVPYNSVLHKNTRISSGINLKGNILIIDEAHNL 361
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF Y Q+ +M+++ L+N + ESPTGTGK++ ++C L W
Sbjct: 9 FPFPPYSIQVQFMKELYNCLENAKLGIFESPTGTGKSMSIICGALKW 55
>gi|307186827|gb|EFN72247.1| Probable ATP-dependent RNA helicase DDX12 [Camponotus floridanus]
Length = 861
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 162/321 (50%), Gaps = 29/321 (9%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL---NFPLRVEN---PHVI 469
+ + NP + R + S++L GT+ PM F +L L P R+ HVI
Sbjct: 559 IKFLLLNPATHFHDIVR-DARSVVLAGGTMEPMSEFIDQLFLMAGAMPDRIMTFSCDHVI 617
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ I + +V GP+G ++ NR + ELG ++N+ IVP G++ FFPSY
Sbjct: 618 PKENIISNVVIRGPTGIEFEFNFHNRQDTKLLDELGRVLLNLCNIVPAGIVAFFPSYSYE 677
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS--TSGAV 587
D H + + I +I K+ EP+ +S + ++ Y +K+ +G++
Sbjct: 678 DIVF------KHLDKSGIASKISIKKRIYREPKLASQVNVILDQYANFIKNPQPPCNGSL 731
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
F+V GK+SEGL+F+D GR +++ G+P++ + P+++ K +YL+ +S
Sbjct: 732 LFSVVGGKLSEGLNFSDDLGRCIIVVGLPYSNIKSPELQEKMKYLNEHVKSD-------- 783
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+G ++Y +AVNQ +GR +RH +DY ++ D+R+ H + + WIQ +
Sbjct: 784 ----AGSNFYENSCMKAVNQCIGRSVRHINDYSTVVLLDKRYRHKVK--VLPQWIQRSVT 837
Query: 708 CYSKFGDVVYTLTRFFREERI 728
FG V+ + +FF +RI
Sbjct: 838 VNDSFGPVIGNIAKFFSAKRI 858
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I + SRTHSQL Q + ELK S Y + V L SR+ CI++ V L+ + N C L
Sbjct: 196 IFFCSRTHSQLTQFVHELKRSPYSQDISVVPLSSRQNYCINKSVKRLKHINLINETCLQL 255
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHL-GDEPI----------DIEDLVNIGRTFGPCPYFM 202
+K T + + P + GD+ + DIE++ G+ CPY+
Sbjct: 256 QRKKTTVKKEKDLKKLKTSSGCPFVPGDQKLLMAEVLTNIKDIEEIAQKGQENDTCPYYG 315
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+R+ ++ ++ PYN ++ R LG++ K ++LI DEAHNL
Sbjct: 316 SRKSLQSGQLILVPYNSILHKSTRDSLGIDLKGNVLIIDEAHNL 359
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 17 AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
AY Q +M+++ L+N L ESPTGTGK+L L+C L W
Sbjct: 13 AYQIQKQFMKELYNCLENGKLGLFESPTGTGKSLSLICGALKW 55
>gi|405976070|gb|EKC40591.1| Putative ATP-dependent RNA helicase DDX11 [Crassostrea gigas]
Length = 921
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 26/355 (7%)
Query: 388 AHSAYYRVHVREADANAADVLKGKA---SRTLSWWCFNPGIAMQEFSRLEVGSIILTSGT 444
AH + + AD + VL TL + NP + ++ + S+++ GT
Sbjct: 581 AHIEGFFASLTSADKDGRIVLTRHTLLKESTLKFLQMNPAVHFKDVLS-QARSVVVAGGT 639
Query: 445 LSPMDSFAQELKLNFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSI 498
+ P++ F Q+L + EN HVI S + A + GP G + ++ +R++
Sbjct: 640 MQPVEEFKQQLFYAAGIGPENIHEYSCGHVIPSDHLLALAMKSGPLGVDFDFTFSSRENS 699
Query: 499 EYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPV 558
ELG I N+ I+P G++ FFPSY W N + I ++ K KK
Sbjct: 700 ALLNELGLVISNVCNIIPGGVVCFFPSYKYQHLVYQHW------NKSGILAKLEKKKKIF 753
Query: 559 VEPRQSSLFPLAIEDYMAKL-KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPF 617
EP+ SS + +Y + K +GA+ V GK+SEG++F+D GR V++ GMP+
Sbjct: 754 QEPKLSSQVEQVLGEYSKSIQKGVKGTGAILLCVVGGKMSEGINFSDDLGRCVIMVGMPY 813
Query: 618 ATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRH 677
+ P+++ K +YL+ + + K L G+ Y +AVNQ++GR IRH
Sbjct: 814 PNIMSPELQEKMQYLN-------SNFPKDKDGHLPGQIHYENLCMKAVNQSIGRAIRHSQ 866
Query: 678 DYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREERICGST 732
DY I+ D+R+ S +S++ WI +Q K+G + +++FF +R C +
Sbjct: 867 DYATILLLDKRYCRESVRSKLPTWIAKDLQRMDKYGPSMAAISKFF--QRKCSNN 919
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 22/177 (12%)
Query: 92 SKLPTILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRG-SAQNN 148
S + I Y SRTHSQL Q ++E+ S Y +++ LGSR+ +C++ EV L S N+
Sbjct: 239 SHVTRIYYCSRTHSQLAQFVREIIKSPYGSNTRVLSLGSRQNMCVNDEVRKLNSLSMMND 298
Query: 149 ACRFLCK---KGTNRRCNHHSRVADYMKNNPH------------LGD----EPIDIEDLV 189
C L K KGT ++ + + K + LG+ E D+E +V
Sbjct: 299 MCLDLQKNKSKGTEKKESDEAVQKKRKKLGSNGCPFYKQETMEDLGNQILTEVTDMEQIV 358
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
GR CPY+ +R ++V PYN L+ R+ G+ + +I++ DEAHNL
Sbjct: 359 ISGRRMKACPYYTSRLSLPLAEVVVLPYNILLHKAMREASGIRLEGNIVLIDEAHNL 415
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
+D FPF+ YD Q +ME + L+ + ESPTGTGK+L L+C L W K
Sbjct: 32 LDFPFPFKPYDVQKKFMENLYLCLEKGQVGIFESPTGTGKSLSLICGALKWLK 84
>gi|326433574|gb|EGD79144.1| hypothetical protein PTSG_09876 [Salpingoeca sp. ATCC 50818]
Length = 879
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 134/249 (53%), Gaps = 19/249 (7%)
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
W G + GP+G + +++ S Y+ +LG I + V G+L+F PSY +D+ +
Sbjct: 516 WVGTLSTGPTGQQMLGTFKQASSFAYQDDLGRIITECCKCVGGGVLVFLPSYSALDRLVE 575
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ LT + + K+ VEPR S ++ +A + ++GAVFFAVCRG
Sbjct: 576 RWR------LTHQFHALNAVKRVFVEPRSGS--KDDFDELLADFYNHVSTGAVFFAVCRG 627
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
K SEG+DF++ R VV G+PF + D KV +K+ Y D A SQ G L G
Sbjct: 628 KASEGIDFSNERARLVVTVGIPFPNIKDLKVNMKKAYND--ANSQRG--------LLRGA 677
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ-ISLWIQPHIQCYSKFG 713
+WY+ QA RA+NQA+GR IRHR D+G ++ D RF S+ Q +S WI+ + +
Sbjct: 678 EWYDIQAFRALNQALGRCIRHRLDWGGLLMVDSRFRTKSKYVQSLSKWIRQRVHQFPTLN 737
Query: 714 DVVYTLTRF 722
+ +L F
Sbjct: 738 EAATSLNAF 746
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 9/203 (4%)
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRP-KMVILGSRE 130
Q ++ G Q S + P I + SRTH QL Q+ +EL S YR M +L SRE
Sbjct: 206 QQTSEGGGEQPLKRSKHLRPKRPPKIFFASRTHKQLEQITKELGRSAYRDVHMTVLSSRE 265
Query: 131 QLCIHREVSLLRGSAQNNACRFLCKK----GTNRRCNHHSRVADYMKNNPHLGDEPIDIE 186
Q CIH VS + A+N C+ + ++ G C +++ + D+E
Sbjct: 266 QTCIHPRVS--KSPAKNEECKLMLEQRAFGGGGSGCAYYNNAQKLASRR--FRTQSWDLE 321
Query: 187 DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
DLV+ G+ CPY+ +RE+ + DIVF PYNYLIDP R + + N+I+I DEAHN+
Sbjct: 322 DLVSAGKRIRGCPYYASREMLPSADIVFCPYNYLIDPVIRSTMDINPANAIIILDEAHNI 381
Query: 247 EGICADAASFDLSSGLLTACISE 269
E + D+AS L+ L + I++
Sbjct: 382 EDVARDSASTSLTVEALESAITD 404
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 1 MPTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWR 60
M Y+I G + FPF+ Y Q + + ++++L NALLESPTG+GK+L LLCA+LAW+
Sbjct: 1 MKEYQICGKRIVFPFKPYPSQFLLISAILKALDKGDNALLESPTGSGKSLALLCASLAWQ 60
Query: 61 KS 62
K+
Sbjct: 61 KA 62
>gi|332029639|gb|EGI69528.1| Putative ATP-dependent RNA helicase DDX11-like protein [Acromyrmex
echinatior]
Length = 857
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 161/321 (50%), Gaps = 29/321 (9%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL------NFPLRVENPHVI 469
+ + NP + + + S++L GT+ PM F +L L + + HVI
Sbjct: 555 IKFLLLNPAAHFHDIVK-DARSVVLAGGTMEPMSEFVDQLFLMAGATSDRIMTFSCDHVI 613
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ I + ++ GP+G +Y NR + ELG ++N+ +VP G+++FFPSY
Sbjct: 614 PKENIISNVITRGPTGIEFEFNYHNRQDTKLLDELGRALLNLCNVVPAGIVVFFPSYNYE 673
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS--TSGAV 587
D + G ++ I + C ++ EP+ +S ++ Y +K+ +GA+
Sbjct: 674 DTVFKHLDKS--GFISKISTKKCIYR----EPKLASQVNTILDQYAHSIKNPQFPCNGAL 727
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
F+V GK+SEGL+F+D GR V++ G+P+ + P+++ K +YL+ +S
Sbjct: 728 LFSVVGGKLSEGLNFSDDLGRCVIVVGLPYPNIKSPELQEKMKYLNENVKSD-------- 779
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+G +Y +AVNQ +GR +RH +DY ++ D+R+ H + + WIQ +
Sbjct: 780 ----AGNSFYENSCMKAVNQCIGRSVRHINDYSTVVLLDKRYCHKVK--VLPQWIQRSVT 833
Query: 708 CYSKFGDVVYTLTRFFREERI 728
+ FG VV + +FF +RI
Sbjct: 834 INNSFGSVVGNIAKFFAAKRI 854
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I + SRTHSQL Q + ELK S Y ++ V L SR+ CI++ V L+ + N C L
Sbjct: 192 IFFCSRTHSQLTQFVHELKRSPYSQEISVVPLSSRQNYCINKNVKRLKHINLINETCLQL 251
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHL-GDEPI----------DIEDLVNIGRTFGPCPYFM 202
KK T + + + + P + GD+ + DIE++ G+ CPY+
Sbjct: 252 QKKKTTVKKEKDLKRSKTTSSCPFIPGDQKLLMAEVLTNIQDIEEITQKGQENNTCPYYG 311
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+R+ + ++ PYN + R L ++ K +ILI DEAHNL
Sbjct: 312 SRKSLQNGQLILVPYNSIFHKNTRASLEIDLKGNILIIDEAHNL 355
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF AY+ Q +M ++ L++ L ESPTGTGK+L L+C L W
Sbjct: 9 FPFPAYEIQKRFMRELYACLKDGKLGLFESPTGTGKSLSLICGALKW 55
>gi|308161158|gb|EFO63616.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia P15]
Length = 1060
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 161/317 (50%), Gaps = 30/317 (9%)
Query: 397 VREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE-VGSIILTSGTLSPMDSFAQEL 455
+++ +NA + + + C P ++ E V S++LTSGTL+P + EL
Sbjct: 592 IKKHSSNAMPTIVSQTGWQVHLLCMTPKSILKTIMIGEGVHSLVLTSGTLAPFSALQAEL 651
Query: 456 KLNFPLRVENPHVIT-SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
L F + V PH+++ S + I V +G L +Y NR+S Y++ LG + R
Sbjct: 652 GLPFNISVSCPHIVSPSNYLLRAITAV--TGTPLLGTYTNRESKSYQRCLGYALQTCVRG 709
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKP---VVEPRQSSLFPLAI 571
V G L+FF SY M Q + WK + T + H P VEP + I
Sbjct: 710 VVGGTLVFFSSYKYMIQVLDSWK----ADGTEAELKSDAHGDPRDLFVEPVRQHDCNAVI 765
Query: 572 EDYMAKLKDTSTSG--AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR 629
Y KD+ +G + F +CRGK++EG+DF+++ R ++ +P+ ++DP +++K
Sbjct: 766 RKY----KDSCDAGRSPILFVICRGKLAEGIDFSNNYCRCALVISLPYPNISDPLLKIKM 821
Query: 630 EYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERF 689
++LD K S L G DWY+ A R VNQA+GRV+RH+ DYG + D+R+
Sbjct: 822 DWLD-------------KHSVLKGSDWYSVHAYRTVNQALGRVLRHKDDYGCMFLLDQRY 868
Query: 690 AHPSRKSQISLWIQPHI 706
+ + Q+S W+ H+
Sbjct: 869 SVEINRKQLSEWLAEHL 885
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 145/329 (44%), Gaps = 85/329 (25%)
Query: 5 KIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
KI G+ FPFE Y Q+ YM +I +L K NALLESPTGTGKTL LL +A+++
Sbjct: 6 KIEGVHFRFPFEPYPSQMKYMSSLITALNKKENALLESPTGTGKTLSLLIPAIAYQEQCI 65
Query: 65 SFSTLGSQV------NNQISGSQSSV--------------------------NSSQSGDS 92
+F +L + + + IS S + S + +S
Sbjct: 66 NFLSLVTSLLKKCKPDTNISESAGAFVLSSNALPMPPDADKLLEWTDQTLGFRDSVTVNS 125
Query: 93 KL-----------------PTILYTSRTHSQLRQVIQELK--------------TSNYRP 121
KL P ILY +RTH+Q+ Q I++LK +S + P
Sbjct: 126 KLKIIRLNDTTRRIAEQLPPKILYAARTHAQIEQAIRQLKNYSTTISGASGNDKSSLFWP 185
Query: 122 KMVILGSREQLCIHREVSLLRGSAQ---NNACRFLCKKGTNRRCNHHSRVAD-------- 170
+ +LGSR CI+ +A + AC+ +C +R+C ++S D
Sbjct: 186 -IAMLGSRRIFCINERAHTYAAAANITLSMACKKICD---DRQCRYYSNDRDNDNLAQKY 241
Query: 171 ---YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
Y +N+ D D+ED + CPY++ R L ++ APYNY++ R
Sbjct: 242 REYYCENSNGRLD---DLEDFFGYCKKESRCPYYLGRALVPQARVITAPYNYILSSKSRT 298
Query: 228 G-LGVEWKNSILIFDEAHNLEGICADAAS 255
L +NSIL+ DE HN+ C DA S
Sbjct: 299 SELSSMLRNSILLVDEGHNIGQACCDAFS 327
>gi|358338885|dbj|GAA57512.1| DNA excision repair protein ERCC-2, partial [Clonorchis sinensis]
Length = 731
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 173/732 (23%), Positives = 304/732 (41%), Gaps = 165/732 (22%)
Query: 37 NALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPT 96
+ +LE P+GTGKT+ LL +A+ K+ +
Sbjct: 2 HGVLEMPSGTGKTVSLLSLIVAYMKA---------------------------RPGAIEK 34
Query: 97 ILYTSRTHSQLRQVIQELKTSN--YRPKM---------VILGSREQLCIHREVSLLRGSA 145
+Y SRT ++ +V++ELK + Y + + L SR+ LCI R+V R +
Sbjct: 35 FIYCSRTVPEIEKVVEELKVLHKYYAAETNEDGCGLLAIALSSRKNLCIERDV---RRAG 91
Query: 146 QNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRE 205
A C + T A +++ H D + C ++ E
Sbjct: 92 DGAAVDAACFRLT----------ASFVRKK-HASDA------------STPSCKFY---E 125
Query: 206 LQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLT 264
+ IV++ Y YL+DP + + KNS+++FDEAHN++ +C ++ S L+ L
Sbjct: 126 IMHANIIVYS-YFYLLDPKIANLVSRDLPKNSVIVFDEAHNIDNVCIESMSCVLTRRSLE 184
Query: 265 ACISEAKNCID--------------------ISSTRRGQSSDET----LNP--------- 291
+ D + R+ Q + ET NP
Sbjct: 185 KATTSLNRLTDRVKDVKQHNAERLKEEYRRLVEGLRQAQVAKETDQVLANPILPDEILRE 244
Query: 292 ---------DNF-AILRALL--LKLEKRIAEVPINSKELGFTKPGPYIYELLAD---LNI 336
D+F A LR L +KL RIA V ++ + F + + ++ D L
Sbjct: 245 AVPGSLRSADSFLAFLRRFLEYVKLRLRIAHV-VHETPVAFLRDC--LEKVCVDRRPLQF 301
Query: 337 TQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVH 396
E L++ +E+A D + T C ++ ++ + +
Sbjct: 302 CAERLRSLLNTLELA------DYAEFSSLTLLCNFATLV-----------ATYTRGFCLI 344
Query: 397 VREADANAADVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQEL 455
+ D + V+ L ++C + + ++ FSR S+I+TSGTLSP+D + + L
Sbjct: 345 IEPFDERSPTVINP----VLYFYCMDASLPIRPVFSRF--ASVIITSGTLSPLDMYPRIL 398
Query: 456 KLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIV 515
+ + + IV G + + + +R+ + + G+ + +A +V
Sbjct: 399 DFHPVNSASFTMTLARSCVLPMIVSKGNDQVPMTTKFESREDMAVVRNYGHLLAQLASVV 458
Query: 516 PDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM 575
PDG++ FFPSY+ ++ A W + E+I +HK VE + + LA+ Y
Sbjct: 459 PDGIVAFFPSYHYLESTFATWYEQH------LIEQIQRHKLLFVETQDAEETSLALAAYH 512
Query: 576 AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
++ GAV +V RG+VSEG+DF H GR V++ G+P+ + + ++L Q
Sbjct: 513 RACENGR--GAVLLSVARGRVSEGIDFDHHLGRCVIMFGVPYVYTQSRIFKARLDFLREQ 570
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
Q E+ ++F A R Q +GR IR + DYG +I D+R+A ++
Sbjct: 571 YNIQPNEF----ITF---------DAMRHAAQCLGRAIRGKSDYGVMILADKRYARADKR 617
Query: 696 SQISLWIQPHIQ 707
S++ WIQ +Q
Sbjct: 618 SKLPGWIQSQLQ 629
>gi|443915597|gb|ELU36981.1| CHL1 helicase [Rhizoctonia solani AG-1 IA]
Length = 803
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 158/327 (48%), Gaps = 28/327 (8%)
Query: 410 GKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSP---MDSFAQELKLNFP----LR 462
G + L + NP +E + S++L GT+SP + F +L P +
Sbjct: 496 GAETVQLKYQLLNPSTHFREVVE-KARSVVLAGGTMSPVIAIGDFHTQLFSYLPSDRLVV 554
Query: 463 VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
HV+ I ++ GP G L + R E ELG T++N+ +VP+G ++F
Sbjct: 555 YSCGHVVPKSNIRTIVLGKGPRGKTLEFKFGARGDEELIVELGQTVLNLTNLVPNGFVVF 614
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS 582
PSY + W + I ER+ K KK EP+++ + ++ A +
Sbjct: 615 LPSYAFLSLVKTAWGKGEN----KILERLSKKKKIFYEPQENGDVESVLREFSATASSPT 670
Query: 583 T--SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
+GA+ FAV K+SEGL+F+D RAV I G+PFA + +++ + +Y+ A S G
Sbjct: 671 EGLTGAILFAVVGAKLSEGLNFSDGLARAVAIVGLPFANLGSAELQARMKYVREHASSSG 730
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL 700
+ ++ RA NQ++GR IRHR D+ AI+F D+R+ P +S++
Sbjct: 731 VDA--------------GKECMRATNQSIGRAIRHRGDWAAIVFIDQRYGTPRIRSKLPG 776
Query: 701 WIQPHIQCYSKFGDVVYTLTRFFREER 727
WI ++ KFG+ + L FFR ++
Sbjct: 777 WIGTDLEVTDKFGEAMKNLGEFFRSKK 803
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYR--PKMVILGSREQLCIHREVSLLR-GSAQNNACRFL 153
I Y SRTH+QL Q + EL+ ++Y+ + V LGSR+ LCI+ +V + G+ + ACR L
Sbjct: 176 IYYASRTHTQLSQFLGELRKTHYQSNARTVPLGSRKNLCINDDVKKGKYGADIDEACRAL 235
Query: 154 CKKGTNRRCNH---HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
+ +RC + A M H+ P DIEDL +GR CPY+ TR K
Sbjct: 236 ASEKDGKRCTYLPPPDEEAKMMDMRDHILSSPKDIEDLEGLGRQTATCPYYGTRRAIKQA 295
Query: 211 DIV 213
+++
Sbjct: 296 EVI 298
>gi|260832748|ref|XP_002611319.1| hypothetical protein BRAFLDRAFT_210722 [Branchiostoma floridae]
gi|229296690|gb|EEN67329.1| hypothetical protein BRAFLDRAFT_210722 [Branchiostoma floridae]
Length = 692
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 175/350 (50%), Gaps = 32/350 (9%)
Query: 389 HSAYYRVHVREADANAADVL--KGKASRT-LSWWCFNPGIAMQEFSRLEVGSIILTSGTL 445
H + + + AD + V+ +G+ S++ L + NP + +E + + ++I+ GT+
Sbjct: 353 HIEAFLLALTNADKDGRVVINKQGRLSQSSLRFLLLNPALHFREIVQ-QARAVIMAGGTM 411
Query: 446 SPMDSFAQELKLNF---PLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIE 499
P+ F + L P R+ HVI + + GP+G ++ SY +R+
Sbjct: 412 QPVSEFKEHLLFAAGVEPQRITEFSCGHVIPGCNLLPVALGSGPAGGAVDFSYEHRNKEY 471
Query: 500 YKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV 559
ELG +VN+ +VP G+ +FFPSY Q ++++ + +R+ K+
Sbjct: 472 MMVELGRVLVNLCNLVPAGVCVFFPSYEYERQVYKFFEDSG------VLKRLSVRKQVFR 525
Query: 560 EPRQSSLFPLAIEDYMAKLKDTST--------SGAVFFAVCRGKVSEGLDFADHAGRAVV 611
EP+++S + DY ++ T +GA+ F+V GK+SEG++F+D GR VV
Sbjct: 526 EPKKASQVDQVLSDYSKCIQRCKTQGYKAMPLTGALLFSVVGGKMSEGINFSDDLGRCVV 585
Query: 612 ITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGR 671
+ G+P+ + P+++ K +YLD G+ G+ Y +AVNQ++GR
Sbjct: 586 MVGLPYPNIKSPELKEKMDYLDATMPHTTGKS--------PGQIHYENLCMKAVNQSIGR 637
Query: 672 VIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTR 721
IRH+ DY I+ D R+ P+ + + WI H+Q SKFGD T+ +
Sbjct: 638 AIRHKEDYATIVLLDRRYFRPNVCAGLPNWISAHLQTISKFGDAFGTIRK 687
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGS------- 144
+P I Y SRTHSQL Q ++E++ S + ++V LGSR+ LCI+ V L S
Sbjct: 1 VPQIYYCSRTHSQLAQFVREVQKSPFGKDVRVVSLGSRQNLCINDSVRKLGSSHLINDRC 60
Query: 145 --AQNNA----CRFLC----------KKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDL 188
QNN R C +KG + C H + Y + + E DIE L
Sbjct: 61 LEMQNNKKKEESRDKCDEAERKQKRKRKGESAGCPFHQHIPTY---SDEVLAEVRDIEQL 117
Query: 189 VNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEG 248
V GR CPY+ TR +V PYN L+ R+ G++ +++I DEAHNL
Sbjct: 118 VVKGRKMDACPYYGTRYSIPAAQLVALPYNTLLHRHTREVSGIKLAGNVVIIDEAHNLVD 177
Query: 249 ICADAASFDLSSGLLTACISE 269
S +++ G + S+
Sbjct: 178 TITGIHSVEITGGQIARAYSQ 198
>gi|71026164|ref|XP_762768.1| DNA helicase [Theileria parva strain Muguga]
gi|68349720|gb|EAN30485.1| DNA helicase, putative [Theileria parva]
Length = 740
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 191/798 (23%), Positives = 342/798 (42%), Gaps = 157/798 (19%)
Query: 21 QLVYMEKVIQSLQNKCNALLESPTGTGKT---LC-------------LLC---------- 54
QL++M+ + L ESPTG+GKT LC ++C
Sbjct: 5 QLIFMKDAYRCFDESLFGLFESPTGSGKTLSILCSALTWLKNNRSKTMMCDIGLEPSRDE 64
Query: 55 --------ATLAWRKSLGS---------FSTLGSQVNNQISGSQSSV------------- 84
A+L +K + L +V++++ S +
Sbjct: 65 EVPEWVSQASLNHKKKMVEDVIKDEAVKLEELRKKVSDRLDTSDGKLRIRENYKRLLTKP 124
Query: 85 NSSQSGDSKLPT-----ILYTSRTHSQLRQVIQELK---TSNYRPKMVILGSREQLCIHR 136
S + ++KL I+ SRT SQL Q ++E K T N ++ + R Q+CI++
Sbjct: 125 ESDTTEENKLENLNKTQIIICSRTFSQLNQYVKEFKQLNTINRNIRLAMGTGRSQVCINK 184
Query: 137 EVSLLRGSAQ--NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD----EPIDIEDLVN 190
++ + + N+ CR +C ++ N L + P+D+EDLV
Sbjct: 185 QIKSKCKTPEELNDECR-------RSKC-------EFRSNTTGLSEIATCYPLDLEDLVR 230
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGIC 250
+G+ G CPY+ DIV APY +I+ R+ LG+ K++ILIFDE HNL
Sbjct: 231 LGKDLGNCPYYSNLTTIPNADIVLAPYVTVINESLRESLGLRIKDNILIFDEGHNL---- 286
Query: 251 ADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLE----- 305
DA + +S L + + + + + ++ G +E + I + ++ +E
Sbjct: 287 TDALTESHASKLTLTGLKQLLHQLGMYVSKYGPKFNELMTQRVSEITKFVVTIVENLSKP 346
Query: 306 KRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKS 365
+ + I + + + +E+L L+ T + + AE +E + KK+
Sbjct: 347 ESSQSLKITAFTVKYALEDIKFHEILNFLSSTDFCRH-----MRGLAE--REYHFRKKKN 399
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
E+I++ +++ K HS Y + D + S +S F P
Sbjct: 400 ------ETIASYTSMVYNLKNFVHSLLY--------CGSNDEVIITKSEDISIEIF-PVA 444
Query: 426 AMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE-----NPHVITSKQIWAGIVP 480
++ E SR S+I+ SGTLSP++ F L L P R E + V ++ + ++
Sbjct: 445 SVGE-SR----SVIVMSGTLSPIEEF---LSLA-PSRAEVFIHRSLPVFPLDRLLSAVIH 495
Query: 481 VGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS 540
+G L Y R++++ + L + I IVP G++ FF SY +D + +S
Sbjct: 496 KDENGDELVFDYSRRENLKELKYLCTLMEIITEIVPGGIVCFFSSYAYLDVFYKFFLKSS 555
Query: 541 HGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGL 600
N + + + K +K V ++FP E K GA+ FAV G SEG+
Sbjct: 556 SSNKVLLRKHVFKEQKNV------NIFPEYSECCAEK-------GAILFAVFGGSQSEGV 602
Query: 601 DFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQ 660
DF+D R V++ G+P+ + K++LKREY + + +S + T ++ +GE ++
Sbjct: 603 DFSDDLARLVLLVGLPYPP-DNIKLKLKREYYNKKCKSTANTHTIT-ITSEAGEQSVSEN 660
Query: 661 AS------------RAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQC 708
S + VNQ +GR +RHR D+ ++ D R+ ++ +++ I
Sbjct: 661 YSKLAREQRTLLCYKTVNQCIGRAMRHRDDFSGVVLLDSRYKGRDADKYLTDYVKKSISM 720
Query: 709 Y-SKFGDVVYTLTRFFRE 725
+K D+ L F+++
Sbjct: 721 NENKTNDLRLMLKNFYQK 738
>gi|282848158|ref|NP_001164296.1| DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Xenopus (Silurana)
tropicalis]
gi|197246717|gb|AAI68601.1| Unknown (protein for MGC:185780) [Xenopus (Silurana) tropicalis]
Length = 895
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 162/327 (49%), Gaps = 26/327 (7%)
Query: 412 ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------ 465
A +L + NP + E + E S+I+ GT+ P+ F Q+L ++ L E
Sbjct: 577 AQSSLKFLMLNPAVHFAEVLK-ECRSVIIAGGTMQPVSDFKQQLLISAGLSPERITEFSC 635
Query: 466 PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
HVI ++ I ++ GP+ L +Y+ RD E E G + N+ VP GL+ FFPS
Sbjct: 636 GHVIPAENILPIVLCSGPTNQQLEFTYQKRDLPEMMDETGRILTNLCNFVPGGLVCFFPS 695
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSG 585
Y + W+ + + ++I + EP++++ + +Y +K+ S SG
Sbjct: 696 YEYQKRIQEHWEKSGLLKRLALKKKIFQ------EPKRANQVDQVLVEYSKCIKNCSQSG 749
Query: 586 -----AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG 640
A+ F+V GK+SEG++F+D GR +V+ GMP+ + P+++ K YLD
Sbjct: 750 GAQNGALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIRSPELQEKMSYLDKTLPKTE 809
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL 700
G +G +AVNQ++GR IRHR DY +I+ D R++ P+ ++
Sbjct: 810 G--------VSAGRVLIENLCMKAVNQSIGRAIRHRGDYASIVLLDHRYSRPAILGKLPQ 861
Query: 701 WIQPHIQCYSKFGDVVYTLTRFFREER 727
WI+ Q FG T+ +FF++++
Sbjct: 862 WIRSSTQVKPNFGAAFATIRKFFQQKK 888
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 113/240 (47%), Gaps = 29/240 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + + ++V LGSR+ +C++ +V L G+ Q N+ C
Sbjct: 213 IYYCSRTHSQLSQFVHEVQKSPFGKQTRLVSLGSRQNMCVNDDVRRL-GNVQLINDRCME 271
Query: 153 LCK-------KGTNRRCNHHSRVA----DYMKNNPHLGDEPI----DIEDLVNIGRTFGP 197
+ + K R+ SR A Y + L DE + DIE LV++ R
Sbjct: 272 MQRNKHEKKNKEPERKKRQESRAACPFYSY-EQMQFLRDETLVEVKDIEQLVSLAREVKA 330
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
CPY+ +R T +V PY L+ RK G++ K+ ++I DEAHNL S
Sbjct: 331 CPYYSSRYAIPTAQVVVLPYQMLLHESSRKASGIKLKDQVVIIDEAHNLIDTITCMYSSQ 390
Query: 258 LSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE 317
+S L S+ +D +R L N ++ L+ LEK + + N K+
Sbjct: 391 VSGAQLCQAHSQLMQYMDRYRSR--------LKAKNLMYVKQLVFLLEKFVQVMGGNVKQ 442
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ 72
FP+E Y Q +MEK+ Q+L+ + ESPTGTGK+L L+C L W L F T Q
Sbjct: 15 FPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTW---LQDFETKKRQ 71
Query: 73 VNNQ 76
Q
Sbjct: 72 EEAQ 75
>gi|303289152|ref|XP_003063864.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454932|gb|EEH52237.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 256
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 148/281 (52%), Gaps = 33/281 (11%)
Query: 450 SFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIV 509
S EL + FP++VE PH++ +Q+ V S L + + + ++S + LG+ ++
Sbjct: 1 SLESELGVEFPVKVEAPHIVPRRQL-----HVEASDALGDFTRKTQESDKMPGNLGSLLL 55
Query: 510 NIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVE-PRQSSLFP 568
++ P G+L+F P Y L+ + I W +T + E + KHK+ V E P +L P
Sbjct: 56 KYVKVTPGGVLVFLPKYSLIQRVIDEWAHTG------MLEELEKHKRVVYEEPGAETLAP 109
Query: 569 LAIEDYMAKLKDT--STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
M KD S G VF AV RGKVSEGLDF D RAV G+PF ++ D KV+
Sbjct: 110 T-----METFKDAIESGRGGVFLAVYRGKVSEGLDFKDANARAVFCVGIPFPSLGDVKVK 164
Query: 627 LKREYLD-LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFC 685
LKREY + ++++ QG +SG +WY QA RA NQA+GR +RH+ DY I
Sbjct: 165 LKREYNNHVESKKQG---------LMSGGEWYTHQAFRAYNQALGRCVRHQFDYACIFLV 215
Query: 686 DERFAHPSRKSQ----ISLWIQPHIQCYSKFGDVVYTLTRF 722
D RF S +S W++ + YS+ + V T+ F
Sbjct: 216 DARFCMHDEASHNKRMVSKWMRNLVTHYSQSRESVGTVREF 256
>gi|403416279|emb|CCM02979.1| predicted protein [Fibroporia radiculosa]
Length = 876
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 168/358 (46%), Gaps = 48/358 (13%)
Query: 416 LSWWCFNPGIAMQEFSRLEVG-SIILTSGTLSPMDSFAQELKL-----NFPLRVENP--- 466
+ + NP Q+ ++V SIIL GT+SP ++ ++ +K+ ++ N
Sbjct: 520 IKYQHLNPSTHFQDV--IDVARSIILAGGTMSPANNPSRLMKIPDIINQLFSKLPNERIA 577
Query: 467 -----HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
H+I + ++ GP G L Y R ELG ++N + +VP G+++
Sbjct: 578 TFSCGHIIPPSNLQTLVLKKGPRGSELTFKYEQRSDRAMILELGQILLNFSNLVPGGMVV 637
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERI---------------CKHKKPVVEPRQSSL 566
F PSY ++ W+ + N +++ C ++ +EP+ SS
Sbjct: 638 FLPSYSFLNVVKTAWEGSGLMNKLKAKKKVVSLDSRKIEPICNDNCPMRQVFLEPQDSSQ 697
Query: 567 FPLAIEDYMAKLKD-------------TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVIT 613
+ DY A + D + T+GA+ FAV K+SEGL+F D RAVVI
Sbjct: 698 VETVLRDYAAAIHDGAGVSRDEKGPTKSKTTGALLFAVIGAKLSEGLNFTDDLARAVVII 757
Query: 614 GMPFATMTDPKVRLKREYLD-LQAQSQ---GGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
G+PFA + P++R + EY++ +Q Q G +K T + + + Y AVNQ++
Sbjct: 758 GLPFANLASPELRERMEYVNRMQKQVSEKLGSAWKMTSGTKDAATELYENMCMNAVNQSI 817
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
GR IRHR D+ ++I D R+ P + ++ WI FG + + RF+RE+R
Sbjct: 818 GRAIRHRGDWASLILVDSRYTLPRIREKLPKWIGQGTLVTDGFGQAIKEMARFYREKR 875
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 86/212 (40%), Gaps = 64/212 (30%)
Query: 97 ILYTSRTHSQLRQVIQELKT------------SNY------------------------- 119
I Y SRTHSQL Q++ EL+ S Y
Sbjct: 116 IYYASRTHSQLAQILHELRKLRIQLNLSLSSHSEYPLALPGVSDPARAKRSVSDIDDDDD 175
Query: 120 -----RPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMK- 173
+ V LGSR+QLCIH E+ G + ACR + + +RC H V D ++
Sbjct: 176 PQTAGTARTVSLGSRKQLCIHEELRRRTGDL-DEACRQMLGEKGKQRCPHLPGVDDEVRM 234
Query: 174 --------------------NNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIV 213
+ + P DIEDLV G+ CPYF +R +V
Sbjct: 235 LDLRDQILVSVSPAVLQVSDRSIAVKATPKDIEDLVVAGQNMETCPYFGSRRAIPQAQLV 294
Query: 214 FAPYNYLIDPWFRKGLGVEWKNSILIFDEAHN 245
PYN L+ R+ +G++ K+ ++I DEAHN
Sbjct: 295 LLPYNLLLQKTAREAIGIDLKDQVIIIDEAHN 326
>gi|429328706|gb|AFZ80466.1| DNA repair helicase rad3/xp-D, putative [Babesia equi]
Length = 851
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 145/549 (26%), Positives = 248/549 (45%), Gaps = 70/549 (12%)
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNS-----------ILIFDEAHNL 246
CPYFM R + +IV Y Y+IDP + + + +++FDEAHN+
Sbjct: 276 CPYFMARRCIEMANIVVLNYQYMIDPKVSESVFSHFSTDKSKQTKSKLPIVVVFDEAHNI 335
Query: 247 EGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI--LRALLLKL 304
+ +C +A S +L+ L ++ + + R + D L N + L+ L +
Sbjct: 336 DNVCIEALSVELNGETLDQAYTDLAHLEENIRVLREKDEDALLQEYNKLLENLKMDTLDI 395
Query: 305 EKRIAEVPINSKELGFTKPGPY--IYELLADLNITQETAYKLIDIVEVAAE--LL----- 355
E ++ V + L PG ++ L I K I + E +E L+
Sbjct: 396 EGYMSPV-LPDDILMKAVPGSIRKAEHFISYLKIIIGYLKKYIKVFEAKSEGPLMFLYRF 454
Query: 356 --QEDKLQNKKSTTACRIESISNILKI----------IFRD----KGTAHSAYYRVHVRE 399
+ D L T R++S+ N LK+ + D GT + + +
Sbjct: 455 EHETDILAETMQHTYNRMKSLLNTLKMTSVGDISSLQLVVDFCTLVGTYSAGFIVIVDPY 514
Query: 400 ADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE-VGSIILTSGTLSPMDSFAQELKLN 458
+ + D L L + C + IAM+ LE S+ILTSGT+SP++ + + L
Sbjct: 515 PNGSIYDPL-------LQFSCLDASIAMRPV--LEGFRSVILTSGTISPLEFYPKILNFT 565
Query: 459 FPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
L P + IV G + +++ + R + + G+ +++ + +PDG
Sbjct: 566 PVLTQSLPMSFDRDCLCPIIVSKGANQVQMSTRFDLRTDVTVLRNYGSLLIDFCKHIPDG 625
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
++ FFPSY M+ ++ W G L++I E HK +E + + LA+ +Y K
Sbjct: 626 IVCFFPSYAYMELILSHWYEC--GILSSIME----HKLIFMETQDAVSTTLALYNY-RKA 678
Query: 579 KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
D GAVF +VCRGKV+EG+DF H GR VV+ G+PF R+ + LD +
Sbjct: 679 CDVG-RGAVFMSVCRGKVAEGIDFDRHYGRCVVLVGIPFQYTLS---RVLKARLDFMRCN 734
Query: 639 QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
G +S ++ A R Q VGR+IR+++D+G ++F D R++ ++S++
Sbjct: 735 YG----------ISENEFITFDAMRQAAQCVGRIIRNKNDFGLMVFADARYSRIDKRSKL 784
Query: 699 SLWIQPHIQ 707
WI +I+
Sbjct: 785 PPWILKNIE 793
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 30/122 (24%)
Query: 1 MPTYKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M + + GI+V FP+ + Y QL YM + +L +A+LE PTGTGKT+ L
Sbjct: 1 MVRFWVDGIEVFFPYPKIYPEQLAYMRSLKNALDAHGHAVLEMPTGTGKTVALF------ 54
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSN 118
S V S Q ++ ++Y +RT ++ + + ELK N
Sbjct: 55 ----------------------SFVASYQLARPEVGKLIYCTRTIHEMEKSLLELKEVIN 92
Query: 119 YR 120
YR
Sbjct: 93 YR 94
>gi|242207140|ref|XP_002469424.1| predicted protein [Postia placenta Mad-698-R]
gi|220731453|gb|EED85297.1| predicted protein [Postia placenta Mad-698-R]
Length = 785
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 160/324 (49%), Gaps = 18/324 (5%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF-PLRVEN---PHVITS 471
+ + NP +E + SI+L GT+SP+ +L + P R+ H+I +
Sbjct: 472 IKYQHLNPSTHFRELIDI-ARSIVLAGGTMSPVSDVIHQLFMGLEPSRIRTFSCGHIIPT 530
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ ++ GP G L Y R + ELG ++N +VP G+++F PSY +
Sbjct: 531 SNLQTLVLKKGPRGGDLLFKYEQRGNQAIIAELGQILLNFVNVVPGGMVVFLPSYSFLHT 590
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
++ W+ + + E++ K+ EP+ + + +Y + T GA+ FAV
Sbjct: 591 MMSAWEGSG------LMEKLKSRKRVFSEPQDAGQIEAVLREYSEAIHRT---GALLFAV 641
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY---LDLQAQSQGGEY-KETK 647
K+SEGL+F D RAV+I G+PFA + P++R + Y L+ Q +++G K
Sbjct: 642 VGAKLSEGLNFTDDLARAVLIIGLPFANLASPELRERMSYVNRLEQQLRAKGDAVTKGAS 701
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+ + + Y AVNQ++GR IRHR D+ ++I D R+A ++++ WI +
Sbjct: 702 ATKDAATELYENMCMNAVNQSIGRAIRHRGDWASLILIDGRYASSRIRNKLPKWIGGNTT 761
Query: 708 CYSKFGDVVYTLTRFFREERICGS 731
FG + + +FFRE+++ S
Sbjct: 762 VTETFGQAMREMGKFFREKKVAAS 785
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW------RKSLGSF 66
FPF+ YD QL M + S++++ ++ESPTGTGKTL LLC++L W R G
Sbjct: 14 FPFKPYDIQLDLMRHLYASVEDRKITIVESPTGTGKTLSLLCSSLTWLKDEQERARKGKL 73
Query: 67 STLG 70
S LG
Sbjct: 74 SELG 77
Score = 39.7 bits (91), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Query: 97 ILYTSRTHSQLRQVIQELK----------TSNYRPKMVILGSREQLCIHREVSLLRGS-A 145
I Y SRTH+QL QV+ EL+ S + G R + + L S A
Sbjct: 197 IYYASRTHTQLAQVLHELRKLKLMLNVTLASVPEEAAAVSGKRRLPEVENDDDDLGSSYA 256
Query: 146 QNNACRFLCKKGTNRRCNHHSRVADYMKN---NPHLGDEPIDIEDLVNIGRTFGPCPYFM 202
R + +RC++ D K + P DIEDLV G+ CPYF
Sbjct: 257 SMMMSRSRTPEKGKKRCHYLPPPEDESKMLDLRDQILASPKDIEDLVATGQESETCPYFG 316
Query: 203 TRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSI 237
+R + +V PYN L+ R+ LG++ + +
Sbjct: 317 SRRAIRQAQLVLLPYNLLLQKTAREALGIDLTDQV 351
>gi|340378232|ref|XP_003387632.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Amphimedon queenslandica]
Length = 886
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 26/326 (7%)
Query: 400 ADANAADVLKGKASR--TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
AD + V+K +S +L + NP + + + E +++L GT+ P F ++L
Sbjct: 542 ADQDCRIVIKQNSSSQSSLKYLLLNPSVHFTDIVK-EARAVVLAGGTMQPFSDFKEQLFT 600
Query: 458 NFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNI 511
+ ++ HVI Q+ + G SGY N +Y R + ELG TI NI
Sbjct: 601 GAGVPIDRFFEFSCGHVIGDDQLLPLTLSKGTSGYTFNFNYEQRQDKQMIIELGRTISNI 660
Query: 512 ARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAI 571
IVP G++ FFPSY W+ + +RI K+ EP+ +S L +
Sbjct: 661 VTIVPGGVVCFFPSYEYEKLVFNIWEKNG------LLDRIANKKQIFREPKLASQAELVL 714
Query: 572 EDYM----AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRL 627
Y + +S +GA+ V GK+SEG++F+D+ GR V++ G+P+ + P++
Sbjct: 715 SQYARCIEVCISVSSLTGALMSCVVGGKLSEGINFSDNLGRCVIMVGLPYPNIKSPELIE 774
Query: 628 KREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDE 687
K EYL+ K S G+ Y+ +AVNQ++GR IRH +DY II D+
Sbjct: 775 KMEYLN-------STQKVDVSSKSPGQMHYDNLCMKAVNQSIGRAIRHANDYATIILIDQ 827
Query: 688 RFAHPSRKSQISLWIQPHIQCYSKFG 713
R++HPS S++ WI + + FG
Sbjct: 828 RYSHPSVYSKLPNWISSQLLITTSFG 853
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKMVI--LGSREQLCIHREVSLLRG-SAQNNACRFL 153
I Y SRTHSQL Q + E+K ++Y+ + + LGSR+ C+++ V+ L+ S N C L
Sbjct: 201 IFYASRTHSQLTQFVHEVKKTSYKDTVSVIPLGSRQTCCLNKSVTKLQSISLINERCIEL 260
Query: 154 CKKG------------TNRRCNHHSRVADYMK-NNPHLG-----DEPIDIEDLVNIGRTF 195
K T R +S DY K NN DE DIE LV +GR
Sbjct: 261 QKNKKKSSTRDNDTVKTKRHRTVNSDGCDYYKLNNIETMRDLALDEIQDIEQLVTLGRDI 320
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
CPY+ TR ++ PYN L+ R +G++ K +I+I DEAHNL
Sbjct: 321 SGCPYYATRYAVPHAQLIVLPYNILLHSNTRDAVGIKLKGNIVIIDEAHNL 371
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D FPF+ Y Q +M + +L+ L ESPTGTGK+L ++C L W
Sbjct: 9 DFPFPFKPYSIQTDFMRSLYSTLEEGKVGLFESPTGTGKSLSIICGCLKW 58
>gi|449542207|gb|EMD33187.1| hypothetical protein CERSUDRAFT_108361 [Ceriporiopsis subvermispora
B]
Length = 954
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 159/330 (48%), Gaps = 44/330 (13%)
Query: 437 SIILTSGTLSPMDSFAQELKLNFPL-RVEN---PHVITSKQIWAGIVPVGPSGYLLNSSY 492
S+IL GT+SPM +L N P R+ H+I S + A ++ G G ++ +
Sbjct: 630 SVILAGGTMSPMSDVVNQLFSNVPRERLSTFSCGHIIPSSNLKALVLKKGSCGGDMHFKF 689
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R E+G T++N A IVP G+++F PSY + + W+ + I ++
Sbjct: 690 ERRSDQALIAEVGQTLLNFANIVPGGMVVFLPSYSFLHSVKSSWEASG------IMGKLS 743
Query: 553 KHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS---------------------------- 584
KK +EP++S+ + DY A+++ T S
Sbjct: 744 AKKKLFMEPQESTQVEAVLRDYAAEIQQTVRSAEAWYMNWHDSRSRPQGTGSTESGQIKA 803
Query: 585 ---GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
GA+ FAV K+SEGL+F D RAV+I G+PFA + P++R + Y++ A+ +
Sbjct: 804 TKGGALLFAVIGAKLSEGLNFTDDLARAVIIIGLPFANLASPELRERMNYVNRVAERRTA 863
Query: 642 EYKET-KLSFL--SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
+ K T K+ + + Y AVNQ++GR IRHR D+ ++I D R+A P + ++
Sbjct: 864 DGKATPKIPGAKDAAMELYENMCMNAVNQSIGRAIRHRRDWASLILLDSRYASPRIRGKL 923
Query: 699 SLWIQPHIQCYSKFGDVVYTLTRFFREERI 728
WI+ FG+ + L F+R +R+
Sbjct: 924 PKWIEESTSVTESFGEAMRELGAFYRGKRL 953
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Query: 122 KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD---YMKNNPHL 178
+ V LG+R+QLCI+ + G + ACR L + +RRC H + D + +
Sbjct: 303 RAVSLGARKQLCINDRLRARAGGELDEACRSLLSEKGDRRCPHLPPMDDETRMLDLRDQI 362
Query: 179 GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSIL 238
P DIEDLV G+ CPYF TR +V PYN L+ R+ LG++ N ++
Sbjct: 363 LAAPKDIEDLVLTGQASETCPYFGTRRAIPQAQLVLLPYNLLLQKTAREALGIDLTNQVV 422
Query: 239 IFDEAHNL 246
I DEAHNL
Sbjct: 423 IVDEAHNL 430
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF YD QL M+ + S++++ A++ESPTGTGKTL LLC +L W
Sbjct: 15 FPFVPYDIQLSLMKHLYSSIEDRKVAIVESPTGTGKTLSLLCGSLTW 61
>gi|322801298|gb|EFZ21985.1| hypothetical protein SINV_11349 [Solenopsis invicta]
Length = 908
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 158/320 (49%), Gaps = 29/320 (9%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL------NFPLRVENPHVI 469
+ + NP + R + S++L GT+ PM F +L L + + HVI
Sbjct: 606 IKFLLLNPAAHFHDIVR-DARSVVLAGGTMEPMSEFIDQLFLMAGATSDRIMTFSCDHVI 664
Query: 470 TSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ I + +V GP+G ++ NR ELG ++N+ +VP G++ FFPSY
Sbjct: 665 PKENIISNVVMRGPTGVEFEFNFHNRQDTRLLDELGRALLNLCNVVPAGIVAFFPSYNYE 724
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTST--SGAV 587
D + G +T I + C ++ EP+ +S ++ Y +K++ + +GA+
Sbjct: 725 DTVFKHLDKS--GIITKISAKKCIYR----EPKSASQVNTILDQYAHSIKNSQSPCNGAL 778
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETK 647
F+V GK+SEGL+F+D GR V++ G+P+ + P+++ K +YL+ +
Sbjct: 779 LFSVVGGKLSEGLNFSDDLGRCVIVIGLPYPNIKSPELQEKMKYLNEHVKPD-------- 830
Query: 648 LSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
+G +Y +AVNQ +GR +RH +DY ++ D+R+ H + + WIQ +
Sbjct: 831 ----AGSSFYENSCMKAVNQCIGRSVRHINDYSTVVLLDKRYCHKVK--VLPQWIQRSVT 884
Query: 708 CYSKFGDVVYTLTRFFREER 727
FG V+ + +FF +R
Sbjct: 885 INDSFGSVIGNIAKFFAAKR 904
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 50/200 (25%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKMVIL------------------------------ 126
I + SRTHSQL Q + ELK S Y + ++
Sbjct: 195 IFFCSRTHSQLTQFVHELKKSPYSQDISVVPLSSRYFSFVFNIYESYLLFIFNIYEHIAQ 254
Query: 127 --------GSREQLCIHREVSLLRG-SAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPH 177
R+ CI++ V L+ + N C L +K T + + + + P
Sbjct: 255 FFINILLSNFRQNYCINKSVKRLKHINLINEICLQLQRKKTTVKKEKGLKKSKTTRGCPF 314
Query: 178 L-GDEPI----------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
+ GD+ + D+E+++ G+ CPY+ +R+ + ++ PYN ++ R
Sbjct: 315 IPGDQKLLMAEILSNIQDVEEIMERGQENNTCPYYSSRKSVQNGQLILVPYNSILHKNTR 374
Query: 227 KGLGVEWKNSILIFDEAHNL 246
LG++ K ++LI DEAHNL
Sbjct: 375 TSLGIDLKGNVLIIDEAHNL 394
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 17 AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
AY+ Q +M ++ ++ L ESPTGTGK+L L+C L W
Sbjct: 13 AYEIQQRFMRELYSCMEGGKLGLFESPTGTGKSLSLICGALKW 55
>gi|348688344|gb|EGZ28158.1| hypothetical protein PHYSODRAFT_470654 [Phytophthora sojae]
Length = 826
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 154/317 (48%), Gaps = 26/317 (8%)
Query: 421 FNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN----PHVITSKQIWA 476
NP I QE + + S+IL GT+ P+ +L + P + HVI + +
Sbjct: 527 LNPVIHFQEIVK-KSRSVILAGGTMQPVSQVIDQLFSSVPRESVDLFSCGHVIPPENLLG 585
Query: 477 GIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACW 536
+ GPS L +Y R +E ELG + N++RIVP G+++FFPSY D + W
Sbjct: 586 FSLASGPSQKHLEFTYSRRGDMEALDELGRILFNLSRIVPGGVVVFFPSYRFEDNAVRRW 645
Query: 537 KNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK--DTSTSGAVFFAVCRG 594
+ T +E+I K EP++S + Y A + SGA+ +V G
Sbjct: 646 QTTKQ------YEQIQAKKAIFREPKKSDELAEVLMQYSAACSQDNRDGSGAMLLSVVGG 699
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
K+SEG++F+D R VV+ GMP+ D ++ K +LD K S SG
Sbjct: 700 KMSEGINFSDELARCVVMVGMPYPNARDAELVEKMAFLD-------------KRSPGSGR 746
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
+Y +AVNQ++G IRH+ DY I+ D R++ + +S++ WIQ + + FG
Sbjct: 747 QFYASLCMKAVNQSIGTSIRHQKDYSTILLVDHRYSSSAVRSRLPEWIQKRVHPPTSFGQ 806
Query: 715 VVYTLTRFFREERICGS 731
V L +F+R + GS
Sbjct: 807 VYSQLVQFYRAKENQGS 823
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 78 SGSQSSVNSSQSGDSK----LPTILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQ 131
S +S+V + G+ K + I+Y SRTHSQ+ Q ++E++ + + R ++V LGSR+
Sbjct: 156 SDEESAVTRGRFGEEKPDFGVVKIIYCSRTHSQISQFVREIRKTAFAERIRVVSLGSRKN 215
Query: 132 LCIHREVSLLRGSAQ-NNACRFLCKKGTNRRCNHHSRVADYMKNN-PHLGDEPI----DI 185
LC + V+ L + + C + + G + + Y K H D + DI
Sbjct: 216 LCTNPNVTKLTSDLRMTDKCLDMMQSGKTKNGKKVGKCPFYEKELLGHYKDYALAHVQDI 275
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHN 245
EDL +G C Y+ TRE IV PY+ L+ R+ LG+ +N+I+IFDEAHN
Sbjct: 276 EDLHTLGEDMSICSYYGTRESIPLAQIVTVPYSLLLSKDARETLGLGLENNIVIFDEAHN 335
Query: 246 L 246
+
Sbjct: 336 I 336
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 8 GIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
G FP+E Y QL M ++ ++L+ + ESPTGTGK++ L+C L W
Sbjct: 3 GAFFSFPYEPYSIQLDLMRQIWETLERGHCGIFESPTGTGKSISLICGALTW 54
>gi|198412602|ref|XP_002126055.1| PREDICTED: similar to ERCC2/XPD gene product [Ciona intestinalis]
Length = 760
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 163/314 (51%), Gaps = 29/314 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + +A++ FSR + S+I+TSGTLSP+D + + L + P+ + + ++Q
Sbjct: 433 LHFSCMDASVAIKPVFSRFQ--SVIITSGTLSPLDMYPRILDFH-PVTMATFTMTLARQC 489
Query: 475 WAGIVPV-GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+V G ++S + R+ + + GN +V + +IVPDG++ FF SY M+ +
Sbjct: 490 LCPVVVTHGNDQVAISSKFETREDVAVIRNYGNLLVEMTKIVPDGIVCFFVSYAYMENIV 549
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
A W I E + K+K +E + ++ +A++ Y ++ GAV +V R
Sbjct: 550 ASWYEQG------ILENVQKNKLLFIETQDAAETSMALDKYQEACENGR--GAVLLSVAR 601
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV++ G+P+ ++ + EYL Q + ++ L+F
Sbjct: 602 GKVSEGIDFTHHHGRAVIMFGIPYVYTQSRILKARLEYLRENYQIRESDF----LTF--- 654
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ---CYS 710
A R Q VGRVIR + DYG ++F D+RFA +K ++ WIQ H+ C
Sbjct: 655 ------DAMRHAAQCVGRVIRGKTDYGVMVFADKRFARSDKKGKLPRWIQEHLSDGVCNL 708
Query: 711 KFGDVVYTLTRFFR 724
+ V+ RF R
Sbjct: 709 STDESVHITKRFLR 722
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ ++L K + +LE P+GTGKT LL +A++
Sbjct: 5 VDGLLVYFPYEFIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTATLLSLIVAYQYEYP 64
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL--------KT 116
+ ++Y SRT ++ +V++EL K
Sbjct: 65 EI---------------------------ISKLIYCSRTVPEIEKVLEELRRLMEYYEKE 97
Query: 117 SNYRPKM--VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRV---AD 170
PK+ + L SR+ LCI+ V R G + C L + H + V +
Sbjct: 98 VGEVPKLCALALSSRKNLCINASVRGARIGKEVDTKCHQLTASHVRIKQKHDASVELCSF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + + +E + +++DL G+ CPYF+ R +IV Y+YL+DP
Sbjct: 158 YEQFDANGREEALPAGVYNLDDLRRYGKLRNWCPYFLARYTITHANIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E KN++++FDEAHN++ +C D+ S +S L C
Sbjct: 218 ADLVSKELSKNAVVVFDEAHNIDNVCIDSMSVTISRRTLDKC 259
>gi|391325164|ref|XP_003737109.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Metaseiulus
occidentalis]
Length = 762
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 162/315 (51%), Gaps = 27/315 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
TL C + IA++ F R + S+I+TSGTLSP++ + + L + + +
Sbjct: 430 TLQLSCMDASIAIRPVFHRFQ--SVIITSGTLSPLEMYPKILNFHPIVMASFTMTLARPS 487
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
I ++ G ++S Y NRD I + GN IV ++ +VPDGL++FF SY ++ +
Sbjct: 488 ICPIVISKGNDQVAISSRYENRDDIAVIRNYGNLIVEMSAVVPDGLVVFFTSYQYLENVV 547
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
A W I ++I + K +E + S+ LA+ Y+ ++ S GAV +V R
Sbjct: 548 ALWYEQG------IVDQILRKKLLFIETQDSAETSLALLHYVKAVE--SGRGAVLLSVAR 599
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV++ G+P+ +R + EYL Q Q + E+ L+F
Sbjct: 600 GKVSEGVDFDHHLGRAVLMFGIPYVFTQSRVLRARLEYLRDQFQIKEQEF----LTF--- 652
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ---CYS 710
A R Q VGR +R + DYG ++F D+RF+ +K ++ WIQ ++ C
Sbjct: 653 ------DAMRHAAQCVGRALRGKTDYGVMVFADKRFSRYDKKXKLPRWIQEYLTDSLCNL 706
Query: 711 KFGDVVYTLTRFFRE 725
+ V + +F R+
Sbjct: 707 STEEGVQVVKKFLRQ 721
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 50/279 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G++V FP++ Y Q YM ++ Q L K + +LE P+GTGKT LL LA++K+
Sbjct: 5 VDGLEVLFPYDFIYPEQYSYMLELKQCLDAKGHGVLEMPSGTGKTATLLSLILAYQKAYP 64
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT--SNYRPK 122
S + ++Y SRT ++ +V++E++ Y+ +
Sbjct: 65 SV---------------------------ISKLVYCSRTMPEIEKVVEEVRRLREYYKKE 97
Query: 123 MVI----------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVADY 171
I L SR+ LC+H +S + G + C +R +
Sbjct: 98 AFISSSNDILGLCLTSRKNLCLHPAISEEKDGRVVDAKCYAF--TSAYKRGEEGEETCTF 155
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
++ G E + I+DL G+ CPYF R ++V Y+YL+DP
Sbjct: 156 FESFDTHGREMLLPPGVYGIDDLKEYGQRHHWCPYFTARHAIMHANVVIYSYHYLLDPKI 215
Query: 226 RKGLGVEWK-NSILIFDEAHNLEGICADAASFDLSSGLL 263
+ E NS+++FDEAHN++ +C D+ S +S ++
Sbjct: 216 ADIVSKELNSNSVVVFDEAHNIDNVCIDSMSVTISKKMM 254
>gi|344278065|ref|XP_003410817.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Loxodonta africana]
Length = 904
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 160/323 (49%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
+L + NP + + + E ++++ GT+ P+ F ++L + E HV
Sbjct: 592 SLKFLLLNPAVHFTQVVK-ECRAVVIAGGTMQPVSDFREQLLACAGVGAERVVEFSCGHV 650
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I I+ GPS L +Y+ R+ + E G + N+ +VP G++ FFPSY
Sbjct: 651 IPPDNILPLIICSGPSNQQLEFTYQKRELPQMMDETGRILCNLCNVVPGGVVCFFPSYEY 710
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK-----DTST 583
+ Q A W+ + + R+ KK EP++++ + +Y +K +
Sbjct: 711 LRQVYARWEQSG------LLVRLAVKKKIFQEPKRANQVEQVLMEYSKCIKCCGQAAGTM 764
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMP+ + P+++ K YLD G+
Sbjct: 765 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRTPGQA 824
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ+VGR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 825 P-------PGKALVENLCMKAVNQSVGRAIRHQKDFASIVLLDQRYARPPTLAKLPAWIR 877
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG L +F RE+
Sbjct: 878 DRVEVKATFGPAFAALRKFHREK 900
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 226 IYYCSRTHSQLAQFVHEVQKSPFGKDTRLVSLGSRQNLCVNEDVKNL-GSVQLVNDRCME 284
Query: 153 LCKKGT------------NRRCNHHSRVADYMKNNPHLGDEPI-----DIEDLVNIGRTF 195
+ + RR + Y L + + DIE LV +G+
Sbjct: 285 MQRSKHEKKSEAEEEKPKRRRQEGQAACPFYNYEQMQLLRDEVLVEVKDIEQLVAMGKEA 344
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ GV + ++I DEAHNL S
Sbjct: 345 RACPYYGSRFAIPAAQLVVLPYQMLLHAATRQAAGVRLQGQVVIIDEAHNLIDAITSIHS 404
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
+LS L S+ ++ R L N ++ +L LEK +A + N
Sbjct: 405 TELSGSQLCQAHSQLLQYMERYRKR--------LKAKNLMYIKQILYLLEKFVAVLGGNI 456
Query: 316 KE 317
K+
Sbjct: 457 KQ 458
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T + GI FP+ Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQDVGGIKFPFPYTPYSIQKDFMTELYKVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|367032502|ref|XP_003665534.1| hypothetical protein MYCTH_2309404 [Myceliophthora thermophila ATCC
42464]
gi|347012805|gb|AEO60289.1| hypothetical protein MYCTH_2309404 [Myceliophthora thermophila ATCC
42464]
Length = 624
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 147/603 (24%), Positives = 252/603 (41%), Gaps = 114/603 (18%)
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIEDL +G+ CPY+ +R ++V PY L+ R LG+ + +++I DEA
Sbjct: 23 DIEDLYRVGKELQVCPYYASRTAIPGAEVVTLPYPLLLQKSARDALGITLEGNVVIIDEA 82
Query: 244 HNLEGICADAASFDLSSGLLTACISE---AKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
HN+ A+ + ++ C+SE A+ + I R G+ L +N ++ A
Sbjct: 83 HNIMDAVANVYAAEI-------CLSELRRARQMLGIYVKRFGKK----LKGEN-RVMVAQ 130
Query: 301 LLKLEKRIAEVPINSK-----ELGFTKPGPYIYELLADLNITQETAYKLIDIVE------ 349
+ ++ + ++E +N + + G P + AD Q Y+LI ++
Sbjct: 131 VGRVVESLSEC-LNGQLSAKGDQGIVDPNTVLKARGAD----QINLYQLIKYIQESKLAY 185
Query: 350 -VAAELLQEDKLQNKKSTTAC-RIESISNILKII--FRDKGTAHSAYYRVHVREADANAA 405
V + L + Q S R S + +L + F T SA R+ + N
Sbjct: 186 KVQSYLAHTENDQEASSAGGGERGSSSTPVLHTLVSFLTALTNLSAEGRIFYEKLAENQG 245
Query: 406 DVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP----L 461
D+ LS+ +P A + ++IL GT+SP + + L P
Sbjct: 246 DI-------KLSYLLLSPTHAFSSIAS-AARAVILAGGTMSPFEDYKMHLFPALPSHKIT 297
Query: 462 RVENPHVITSKQIW----AGIVPVGPSGY-----LLNSSYRNRDSIEYKQELGNTIVNIA 512
+ HVI + ++ + I P PSG S++ R ++LG ++NI
Sbjct: 298 TLSCGHVIPASNLFCWTLSSIKPT-PSGDPSASDCFEFSFQRRQEPAMIRQLGLVLLNIC 356
Query: 513 RIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT--------TIWERICKHKK-------- 556
+VPDG+++FFPSY +DQ +A W+ G T+W+R+ K
Sbjct: 357 SVVPDGVVVFFPSYGYLDQVVAAWQTQEAGTGATTTTTQQPTLWDRLAAKKAVFRETKGA 416
Query: 557 -----------PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADH 605
V+ PRQ + K GA+ +V GK+SEG++F+D
Sbjct: 417 TSEDILQQYSTAVLSPRQPDR-----RNPADKPPPPGGRGALLLSVVGGKLSEGINFSDR 471
Query: 606 AGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ-------------------------G 640
GR VV+ G+P+ + P + + EY++ A ++
Sbjct: 472 LGRCVVVVGLPYPNVHAPDWKARLEYVESTALARLVGGGGDGGDGGDDDDGQPGGAREEA 531
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL 700
+ + ++Y RAVNQ++GR IRHR DY A++ D RF+ + ++
Sbjct: 532 AATAARAQAKQAAREFYENTCMRAVNQSIGRAIRHRGDYAAVVLVDRRFSTERIRGKLPG 591
Query: 701 WIQ 703
WI+
Sbjct: 592 WIR 594
>gi|255084633|ref|XP_002508891.1| predicted protein [Micromonas sp. RCC299]
gi|226524168|gb|ACO70149.1| predicted protein [Micromonas sp. RCC299]
Length = 915
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 152/355 (42%), Gaps = 76/355 (21%)
Query: 437 SIILTSGTLSPMDSFAQELKLNFPLRVENP------------------------------ 466
+++L GTL+P+ A +L FP V
Sbjct: 555 AVVLVGGTLAPIPELAAQL---FPDAVPEEDGTFEGANDEKSSAVQHGKIPRTLTTLSCG 611
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HV+ + V GPSG L+ S+ +R + E ELG + N R+ P G+++FFPS+
Sbjct: 612 HVVPRDALLPLAVARGPSGRALDYSFGSRSAPEAIDELGRLLANACRVAPGGVVVFFPSF 671
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKD------ 580
D W T + I +HK EPR ++ + D+ +++
Sbjct: 672 AYADDVYDRWVKTG------VNSEIARHKAIFREPRAAAKVEKVLRDFATSVRNGEERRR 725
Query: 581 ---------------------TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
+GAV VC GK+SEG++F D GR VV+ G+P+A
Sbjct: 726 AAVAAHSGVSENGSVGSSGVPAGRTGAVMLCVCGGKLSEGINFKDELGRLVVMVGLPYAN 785
Query: 620 MTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDY 679
+P+++ + +LDL + G + T G +Y RAVNQ+VGR IRH DY
Sbjct: 786 PEEPELKARMRHLDLSDRKVGSAAEPTAGGKSRGRAYYEALCMRAVNQSVGRAIRHVGDY 845
Query: 680 GAIIFCDERFAHPSRK----------SQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
AI+F D R+A P + SQ+ WIQ + +G+V L RFFR
Sbjct: 846 AAIVFVDGRYAPPGAETGRMPPLGVSSQLPEWIQERLVIPRGYGEVQSGLVRFFR 900
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 43/191 (22%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPK-----MVILGSREQLCIHREVSLLRGSAQ---NN 148
+++ SRTHSQL QV+ EL +++ + V + SR QLC++ E G++ N
Sbjct: 159 VIFCSRTHSQLTQVVGELNRTSFGGEDGTVNAVAVASRAQLCVNPEARAAAGASAARLNE 218
Query: 149 ACRFLCK---KGTNRR---------CNHHSRVADYMKNNPHLGD---------------- 180
C L K KG R + AD K P G
Sbjct: 219 RCLELGKPKAKGERARKGGEGGGVGGRDGADGAD--KPRPAAGSGCPYLKKRHAAVADLA 276
Query: 181 -----EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKN 235
P+DIEDL G C Y+ R+ D+VFAPY L+ R+ LG+ K
Sbjct: 277 DAALAAPMDIEDLAAAGTRHRACAYYAARKALPRADLVFAPYASLLHKETRESLGINLKG 336
Query: 236 SILIFDEAHNL 246
S+++FDEAHNL
Sbjct: 337 SVVVFDEAHNL 347
>gi|195469691|ref|XP_002099770.1| GE16539 [Drosophila yakuba]
gi|194187294|gb|EDX00878.1| GE16539 [Drosophila yakuba]
Length = 859
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 167/334 (50%), Gaps = 34/334 (10%)
Query: 402 ANAAD--VLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKL 457
+NA D +L TL + +P ++F+ + E +I++ GT+ P ++L
Sbjct: 547 SNAEDGRILLDPVGGTLKYILLDPA---EQFADIVEEARAIVIAGGTMQPTQELKEQLFT 603
Query: 458 NFPLR-VEN--PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
+ R VE+ HV+ + ++ GPSG L+ + +R S E QEL + N+ ++
Sbjct: 604 SCQDRLVEHFYNHVVADDAVLPFVISNGPSGAPLSFQFAHRASAEMLQELSMLLRNLCQV 663
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
VP G++ F PSY +D+ + + G L TI + +K V S L +++Y
Sbjct: 664 VPGGVVCFLPSYEYLDKVYTYLEQS--GTLETI-----RGRKSVFREVSGSAEQL-LDNY 715
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
+K ++ GA+ +V GK+SEGL+FAD GRAV++ G+P+A P++R + ++LD
Sbjct: 716 ALAIKKPASGGALLLSVVGGKLSEGLNFADDLGRAVLVVGLPYANRQSPELRQRMQHLD- 774
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
KL +G ++Y +AVNQ +GR +RH DY + D+RFA P
Sbjct: 775 -----------EKLGPGAGNEYYENLCLKAVNQCIGRAVRHIKDYACVYLLDKRFADPKI 823
Query: 695 KSQISLWIQPHI----QCYSKFGDVVYTLTRFFR 724
+ ++ WI HI FG V RFF+
Sbjct: 824 RGKLPKWISRHIVESNSANGGFGAVQARTARFFK 857
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSA-QNNACRFL 153
I + SRTHSQL Q++ EL+ + + + + LGSR+QLC + +V L+ N C +
Sbjct: 190 IFFCSRTHSQLAQIVAELRKTPHGQAVRCISLGSRQQLCGNPQVRRLKHVGLMNERCLDM 249
Query: 154 CKKGTNRRCNHHSRVADY------MKNNP---HLGD----EPIDIEDLVNIGRTFGPCPY 200
K + SR++ K P L D EP+DIE+L + G G C Y
Sbjct: 250 ATKKARPNPSKKSRLSAEANSRCPFKAAPLVESLRDLALSEPLDIEELASEGAACGGCSY 309
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+ +R + +V PY L+ R LG+ K SI+I DEAHNL
Sbjct: 310 YASRSAVEHAQLVLLPYQLLLQKSARNQLGINLKGSIVIVDEAHNL 355
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ Y Q M+++ Q L+ + ESPTGTGK+L L C L W
Sbjct: 20 FPYPPYTIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTW 66
>gi|85001257|ref|XP_955347.1| chl1 protein [Theileria annulata strain Ankara]
gi|65303493|emb|CAI75871.1| chl1 protein, putative [Theileria annulata]
Length = 829
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 162/613 (26%), Positives = 274/613 (44%), Gaps = 73/613 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKMVILG---SREQLCIHREVSLLRGSAQ--NNACR 151
I+ SRT SQL Q ++E K N K V L R +CI+ + S + N+ CR
Sbjct: 168 IIICSRTFSQLNQYVKEFKRLNKINKNVRLSIGSGRSHVCINNMIKSKCKSPEELNDECR 227
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
+C + S D ++ P+D+EDLV++G+ G CPY+ + D
Sbjct: 228 -------RSKCEYRSNTTDLIEITTCY---PLDLEDLVSLGKESGCCPYYSNLKTLTNAD 277
Query: 212 IVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAK 271
IV APY +I R+ LG+ K++ILIFDE HNL ++ S L+ L + + +
Sbjct: 278 IVLAPYITVISESLRESLGLRIKDNILIFDEGHNLTDAITESRSCKLTLVGLKELLHQLR 337
Query: 272 NCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAE------VPINSKELGFTKPGP 325
S + +++ T+ D + + L+ + + +++ + I S + ++
Sbjct: 338 -----SYVNKYKTNFNTIVSDRVSEITKLVNVIIENVSKSESSQNLKITSFTVLYSLEDI 392
Query: 326 YIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDK 385
+E+L L+ T + + AE +E ++ KK ES+ + +I+ K
Sbjct: 393 KFHEILNFLSSTDFCRH-----LRGWAE--REYHIKKKKD------ESLVSYTSMIYNLK 439
Query: 386 GTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTL 445
+S Y D+N ++ + + GI + E S+++ SGTL
Sbjct: 440 NFIYSLLY------CDSNDQIIITKSEDVVIEIFPVASGIYVLISYIGESRSVVIMSGTL 493
Query: 446 SPMDSFAQELKLNFPLRVE-----NPHVITSKQIWAGI----VPVGPSGYLLNSSYRNRD 496
SP++ F L L P + E +P V + A I V + G L Y R+
Sbjct: 494 SPIEEF---LSLA-PSKTEVFIHKSPPVFPLNRFLATINHIFVCLDERGDELVFDYSRRE 549
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKK 556
++E L N + ++ IVP G++ FF SY +D + +S +++ K
Sbjct: 550 NLEELNFLCNLLELLSEIVPGGIVCFFSSYSYLDLFYNYFIKSSSN------KKVLTRKD 603
Query: 557 PVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMP 616
E + ++FP +Y K GAV AV G SEG+DF+D R V++ G+P
Sbjct: 604 VFKEQKNINIFP----EYS---KSCFERGAVLLAVFGGNQSEGVDFSDDLARLVLLVGLP 656
Query: 617 FATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHR 676
+ + K+ LKR+Y + ++ S LS E + VNQ +GR +RHR
Sbjct: 657 YPP-DNIKLSLKRDYYNKKSLESCDASVSENFSKLSNEQR-TLLCYKTVNQCIGRAMRHR 714
Query: 677 HDYGAIIFCDERF 689
+DY A++ D R+
Sbjct: 715 NDYSAVLLLDGRY 727
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
++ E PFE Y QL++M+ + L ESPTG+GKTL +LC+ L W K+
Sbjct: 10 VEFELPFEPYPNQLIFMKDAYKCFDESSFGLFESPTGSGKTLSILCSALTWIKN 63
>gi|14521544|ref|NP_127020.1| DNA repair helicase rad3 [Pyrococcus abyssi GE5]
gi|5458763|emb|CAB50250.1| ERCC2/XPD/rad3 DNA repair helicase, TFIIH helicase beta subunit
homolog [Pyrococcus abyssi GE5]
gi|380742154|tpe|CCE70788.1| TPA: DNA repair helicase rad3 [Pyrococcus abyssi GE5]
Length = 637
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 183/716 (25%), Positives = 310/716 (43%), Gaps = 146/716 (20%)
Query: 24 YMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSS 83
++E V ++ ++E+PTG GKT+ +L L S G
Sbjct: 17 FIELVRDVVKRGEKVIIEAPTGFGKTISVLAGVLPHAISFGY------------------ 58
Query: 84 VNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLL 141
++Y +RTH Q+ +VI+ELK K+ + SR+ LC+H S +
Sbjct: 59 ------------KVIYLARTHKQMDRVIEELKRIREIAKVSGIEFRSRKDLCLH---SYI 103
Query: 142 RGSAQNNACRFLCKKGTNR--RCNHHS----------RVADYMKNNPHLGDEPIDIEDLV 189
R AQ+ + K R +C + + ++ NP E I+ +L+
Sbjct: 104 RTFAQDAYTSMIVCKSLKRLGKCKYFENLKEKRDKVKEIVEFFLENPSYPWEVIEYSNLL 163
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK----GLGVEWKNSILIFDEAHN 245
+ CPY +TR++ + +++ A Y Y+++PW R+ GLG+E+ + I+IFDEAHN
Sbjct: 164 EL------CPYEVTRKVGEKANVIVASYLYMVNPWIRQAFLDGLGLEYSDLIVIFDEAHN 217
Query: 246 LEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNF--AILRALLL- 302
L A S LS + I EA G+ E NF LR L +
Sbjct: 218 LPDQAISALSDRLSIRSVERAIKEANEY--------GEKDIE-----NFLSIFLRGLEII 264
Query: 303 ---KLEK-RIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLI-DIVEVAAELLQE 357
KLE I+EVP++ P + + L + + + + ++VEV + ++E
Sbjct: 265 YKEKLENYEISEVPLS--------PASIFEHVSSILGLRERDLLRFLQEMVEV-GDAIRE 315
Query: 358 DKLQNK---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASR 414
DK++ +S E + N + + R S Y V RE KG A
Sbjct: 316 DKIERNLPPRSYVGRVGEFLWNWISLADR------SDYLHVFTRE---------KGLA-- 358
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L +P +A++ +V S IL SGTLSP+++F + +N L+ + P ++ S+
Sbjct: 359 -LEIVALDPSVALEFLE--DVHSAILMSGTLSPLEAFRDIIGVNARLK-KFPRMVKSEN- 413
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV V +++ R + YK+ L I +I+P + +F SY +++ I+
Sbjct: 414 --AIVLVARD---VSTRGEERSPVLYKK-LAEYIFEAVKIIPKNVGVFTASYEVLEGLIS 467
Query: 535 CWKNTSHGNLTTIWERICKH--KKPVVEPRQSSLFPLAIEDYMAKLK-DTSTSGAVFFAV 591
T + RI + KK +E R +S + +A+ K + +G V F V
Sbjct: 468 ----------TNVHIRIEEEIGKKVFIEKRDAS--SSENDALVAEFKAEAKGNGGVLFGV 515
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
G+ SEG D++ V++ G+P+A T P+V+ + Y + + +G Y
Sbjct: 516 MGGRNSEGQDYSGDEMNGVILVGIPYARPT-PRVQAQIRYYEKKFPGKGRYYG------- 567
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
Y A R + QA GRV R + G+I+ D R + K + W+ +Q
Sbjct: 568 -----YLLPAHRKLAQAAGRVHRSEEEKGSIVILDYRVLWNTVKRDLPDWMVETMQ 618
>gi|345317478|ref|XP_001517598.2| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Ornithorhynchus anatinus]
Length = 899
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 155/312 (49%), Gaps = 26/312 (8%)
Query: 422 NPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHVITSKQIW 475
NP + + R E ++I+ GT+ P+ F ++L + E HVI I
Sbjct: 601 NPAVHFAQVVR-ECRAVIIAGGTMQPVADFREQLLACAGVGAERVVEFACGHVIPPDNIL 659
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
++ GPS L +Y+ R+ + E G + N+ +VP G++ FFPSY Q A
Sbjct: 660 PLVLCSGPSNQPLEFTYQKRELPQMMDETGRILFNLCNVVPGGVVCFFPSYEYQRQVQAR 719
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----TSGAVFFA 590
W+++ + R+ KK EP+++S + DY ++ S +GA+ +
Sbjct: 720 WEHSG------LLARLGIKKKVFQEPKKASQVEKVLADYSKCIQHCSQPGSAMTGALLLS 773
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V GK+SEG++F+D GR VV+ GMP+ + P+++ K YLD G+
Sbjct: 774 VVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRGPGQ-------- 825
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS 710
G+ RAVNQ++GR IRH+HD+ +I+ D+R+A P+ +++ WI+ ++ +
Sbjct: 826 APGKALIENTCMRAVNQSIGRAIRHQHDFASIVLLDQRYARPAILAKMPGWIRGRVEVKA 885
Query: 711 KFGDVVYTLTRF 722
FG L +F
Sbjct: 886 AFGPAFAMLRKF 897
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 106/252 (42%), Gaps = 40/252 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + ++ LGSR+ LC++ +V L GS Q N+ C
Sbjct: 215 IYYCSRTHSQLAQFVHEVQRSPFGKETRLASLGSRQSLCVNEDVRRL-GSMQLINDRCME 273
Query: 153 LCKKGTNRRC---------------NHHSRVADYMKNNPHLGDEPI------------DI 185
L + R+ R + P E + DI
Sbjct: 274 LQRNKQARKNPEEEEKEEQAEETGKARKKRKRESRATCPFYSYEQMQLLRDKVLVEVKDI 333
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHN 245
E LV +G+ CPY+ +R +V PY L+ R+ G++ ++ ++I DEAHN
Sbjct: 334 EQLVALGQESHACPYYGSRYAIPAAQLVVLPYQMLLHSATRRAAGIQLQDQVVIIDEAHN 393
Query: 246 LEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLE 305
L S +++ L S+ ++ R L N ++ +L LE
Sbjct: 394 LIDTITAIHSAEVNGAQLCQAYSQLLQYLERYRKR--------LKAKNLMYIKQILYLLE 445
Query: 306 KRIAEVPINSKE 317
K +A + N K+
Sbjct: 446 KFVAVLGGNVKQ 457
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 2 PTYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
PT + + FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 4 PTEEPGRVHFPFPFTPYPIQESFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW-- 61
Query: 62 SLGSFSTLGSQVNNQI----------SGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVI 111
L F T Q ++ G Q S + +G+ T + R+++
Sbjct: 62 -LRDFETKKKQEEARLLEAGNNPPDDHGDQPSGPGTSAGEPDWITQFVQKKEE---RELV 117
Query: 112 QELKTSNYRPK 122
+ LK R K
Sbjct: 118 ERLKDEQARRK 128
>gi|357617927|gb|EHJ71072.1| putative DEAD/H [Danaus plexippus]
Length = 756
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 31/326 (9%)
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQEL-----KLNF 459
VL S L + NP + F+ + + S+IL GT+ P+ F + L +L+
Sbjct: 442 VLTQSDSGLLKYLLLNPA---EHFADVVSQCRSVILAGGTMEPISEFQELLASDKTQLDR 498
Query: 460 PLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
V+ HV+ + + + GPS LN SY NR S E E+G + N+ +VPDG+
Sbjct: 499 VNVVKCGHVVPADNVLGICLSKGPSKLNLNFSYENRSSFELLNEIGRILRNLCNVVPDGV 558
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
+ F PSY +Q + H T + E + K K EP+ +S ++ Y A +K
Sbjct: 559 VCFLPSYSF-EQTL-----YEHLKSTGVLESVSKKKIIFREPKSASEVEQVLQKYSAAVK 612
Query: 580 DT--STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQ 637
+GA+ +V GK+SEGL+F+D GR V++ GMP+ + +++ K +YL+ +
Sbjct: 613 SKVGDINGALMLSVVGGKLSEGLNFSDELGRCVLVVGMPYPNIKSLELQEKMKYLN---K 669
Query: 638 SQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ 697
S G SG +Y +AVNQ +GR +RH +DY +I DER++ S
Sbjct: 670 STPG----------SGSIYYENLCMKAVNQCIGRAVRHANDYACVILVDERYSRSQTISA 719
Query: 698 ISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ ++Q + FG + ++ +FF
Sbjct: 720 LPSFVQKSLISNCVFGQAMGSIAKFF 745
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 28/195 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTS--NYRPKMVILGSREQLCIHREVSLLRG-SAQNNACRFL 153
I +SRTHSQL Q I E+K + N K+V L SR+ CI+ EV+ L+ S N C +
Sbjct: 76 IYISSRTHSQLSQFIGEIKRTIFNKGTKVVTLASRQHYCINSEVNRLKNVSLINERCLEM 135
Query: 154 ----------------CKKGTNRRCNHHSRVADYMKNN-----PHLGDEPIDIEDLVNIG 192
KK + C S Y +NN L E +D+E++V G
Sbjct: 136 QKSKTKSTAKDEEGKVVKKSKTKAC---SACPYYNQNNIKKLKEKLLVEVMDMEEIVKSG 192
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICAD 252
+ CPY+ +R + ++ + ++ R G+ ++ +N+ILI DEAH L +
Sbjct: 193 KQMKACPYYASRMALEDAEVALISHAGIVSHGARTGVSIKLQNNILIMDEAHGLSAALEN 252
Query: 253 AASFDLSSGLLTACI 267
A S +S L+ C+
Sbjct: 253 AHSAPVSHKQLS-CV 266
>gi|380014617|ref|XP_003691322.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Apis florea]
Length = 759
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 152/292 (52%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IAM+ F R + S+++TSGTLSP+D + + L + + + +
Sbjct: 433 LHFVCLDSSIAMKPIFDRFQ--SVVITSGTLSPLDMYPKILNFHPVIMSSFTMTLARPCL 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S Y R+ + + G +V A VPDGL+ FF SY M+ +A
Sbjct: 491 LPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLYMESVVA 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + + +++ +HK +E + S+ LA+ +Y+ ++ GAV +V RG
Sbjct: 551 AWYDQG------VVDQLQRHKLLFIETQDSAETSLALINYIKACENGR--GAVLLSVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + ++ L+F
Sbjct: 603 KVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDF----LTF---- 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 655 -----DAMRHAAQCVGRAIRGKTDYGIMIFADKRFSRVDKRSKLPKWIQEHL 701
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 134/276 (48%), Gaps = 50/276 (18%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ + L K + LLE P+GTGKT+ LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--------- 115
+ N + ++ ++Y SRT ++ +VI+ELK
Sbjct: 60 -------MLENPLDVTK---------------LIYCSRTVPEIEKVIEELKKLMDYYEKE 97
Query: 116 TSNYRPKMV--ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVAD 170
T N +PK+V +L SR+ +CIH EVS R G + C L R N+ + + +
Sbjct: 98 TEN-KPKIVGLVLSSRKNMCIHPEVSREREGKIVDGRCHSLTASYVRERHNYDDSTPICN 156
Query: 171 YMKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
+ + G E I I+DL G+ CPYF+ R IV Y+YL+DP
Sbjct: 157 FYEGFDMEGKEQIMPSGIYSIDDLKEYGKDRNWCPYFLARFTILHAQIVVYSYHYLLDPK 216
Query: 225 FRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS 259
+ + E KNS++IFDEAHN++ +C D+ S ++
Sbjct: 217 IAETVSRELSKNSVVIFDEAHNIDNVCIDSMSVKIN 252
>gi|328786210|ref|XP_396155.4| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Apis mellifera]
Length = 759
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 152/292 (52%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IAM+ F R + S+++TSGTLSP+D + + L + + + +
Sbjct: 433 LHFVCLDSSIAMKPIFDRFQ--SVVITSGTLSPLDMYPKILNFHPVIMSSFTMTLARPCL 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S Y R+ + + G +V A VPDGL+ FF SY M+ +A
Sbjct: 491 LPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLYMESVVA 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + + +++ +HK +E + S+ LA+ +Y+ ++ GAV +V RG
Sbjct: 551 AWYDQG------VVDQLQRHKLLFIETQDSAETSLALINYIKACENGR--GAVLLSVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + ++ L+F
Sbjct: 603 KVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDF----LTF---- 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 655 -----DAMRHAAQCVGRAIRGKTDYGIMIFADKRFSRIDKRSKLPKWIQEHL 701
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 134/275 (48%), Gaps = 48/275 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ + L K + LLE P+GTGKT+ LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
+ N + ++ ++Y SRT ++ +VI+ELK
Sbjct: 60 -------MLENPLDVTK---------------LIYCSRTVPEIEKVIEELKKLMDYYEKE 97
Query: 117 SNYRPKMV--ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADY 171
++ +PK+V +L SR+ +CIH EVS R G + C L R N+ + + ++
Sbjct: 98 TDNKPKIVGLVLSSRKNMCIHPEVSREREGKIVDGRCHSLTASYVRERHNYDDSTPICNF 157
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E I I+DL G+ CPYF+ R IV Y+YL+DP
Sbjct: 158 YEGFDMEGKEQIMPSGIYSIDDLKEYGKDRNWCPYFLARFTILHAQIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS 259
+ + E K+S++IFDEAHN++ +C D+ S ++
Sbjct: 218 AETVSRELSKSSVVIFDEAHNIDNVCIDSMSVKIN 252
>gi|51491862|ref|NP_001003919.1| probable ATP-dependent RNA helicase DDX11 [Mus musculus]
gi|81884425|sp|Q6AXC6.1|DDX11_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=DEAD/H box protein 11
gi|50926041|gb|AAH79656.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae) [Mus musculus]
Length = 880
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 158/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL------KLNFPLRVENPHV 468
+L + NP + + + E ++++ GT+ PM F ++L + + HV
Sbjct: 566 SLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHV 624
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I I+ GPS L +Y+ R+ + +E G + N+ +VP G++ F PSY
Sbjct: 625 IPPDNILPLIICSGPSNQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGVVCFLPSYEY 684
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS---- 584
+ Q A W T G LT R+ KK EP+++S + Y + S S
Sbjct: 685 LRQVHAHWDKT--GLLT----RLSVRKKIFQEPKRASQVEQVLMAYSKCIMSCSHSEGHL 738
Query: 585 -GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++ K YL+ G+
Sbjct: 739 TGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQP 798
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
L G +A+NQ++GR IRH+ D+ +I+ D R+A PS +++ WI+
Sbjct: 799 -------LPGTVLIENLCMKAINQSIGRAIRHQRDFASIVLLDHRYARPSILAKLPAWIR 851
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + +F RE+
Sbjct: 852 DRVEVKATFGPAFAAVRKFHREK 874
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 29/241 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q ++E+ S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 201 IYYCSRTHSQLAQFVREVLKSPFGKETRLVSLGSRQTLCVNEDVKNL-GSVQLMNDRCVD 259
Query: 153 LC-----KKGTN----RRCNHHSRVADYMKNNPH---LGDEPI----DIEDLVNIGRTFG 196
+ K GT +R + + N+ L DE + D+E LV +G+
Sbjct: 260 MQRSKREKNGTGEDKPKRKRQKIQTSCPFYNHEQMELLRDEILLEVKDMEQLVALGKEAR 319
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL + S
Sbjct: 320 ACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNIHST 379
Query: 257 DLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSK 316
+++ L S+ ++ R L N ++ +L LEK +A + N K
Sbjct: 380 EVNGSQLCQAHSQLLQYMERYRKR--------LKAKNLMYIKQILYLLEKFVAVLGGNVK 431
Query: 317 E 317
+
Sbjct: 432 Q 432
>gi|405958071|gb|EKC24234.1| TFIIH basal transcription factor complex helicase subunit
[Crassostrea gigas]
Length = 1184
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 27/314 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R + ++++TSGTLSP++ + + L + I
Sbjct: 857 LHFSCMDASIAIKPVFDRFQ--TVVITSGTLSPLEMYPRILDFRPVTMATFTMTLARTCI 914
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+V G + S Y R+ + + GN +V IVPDG++ FF SY M+ +A
Sbjct: 915 CPMVVSKGNDQVAMTSKYETREDVAVIRNYGNLLVEFCSIVPDGIVCFFTSYIYMESTVA 974
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W I +++ KHK +E + ++ LA+ +Y ++ GAV +V RG
Sbjct: 975 AWYEQG------ILDQVQKHKLLFIETQDAAETSLALLNYQKACENGR--GAVLLSVARG 1026
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + ++ L+F
Sbjct: 1027 KVSEGIDFDHHFGRAVIMFGIPYVYTQSKILKARLEYLRDQYQIRENDF----LTF---- 1078
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ---CYSK 711
A R Q VGR +R + DYG ++F D+RFA ++S+I WIQ +++ C
Sbjct: 1079 -----DAMRHAAQCVGRALRGKTDYGIMVFADKRFARADKRSKIPRWIQEYLKDGLCNLS 1133
Query: 712 FGDVVYTLTRFFRE 725
+ V RF R+
Sbjct: 1134 VDEAVQVSKRFLRQ 1147
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 127/277 (45%), Gaps = 58/277 (20%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q +YM ++ +SL K + LE P+GTGKT+ LL +A+ K+
Sbjct: 385 IDGLLVYFPYDYIYPEQYMYMLELKKSLDAKGHCALEMPSGTGKTISLLSLIVAYMKA-- 442
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNY---- 119
++ ++Y SRT +L +V+ ELK +Y
Sbjct: 443 -------------------------NPLEVTKLIYCSRTVPELEKVVAELKNLMDYYEQQ 477
Query: 120 ----RPKMV--ILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMK 173
+PK++ L SR+ LCI+ EVS R +A LC K T A +++
Sbjct: 478 LGKGKPKILGLALSSRKNLCINPEVSQERDGKNVDA---LCHKLT----------ASFVR 524
Query: 174 NNPHLGDEPIDIEDLVNIGRTFG---PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
N H D + + G P P + L +IV Y YL+DP + +
Sbjct: 525 AN-HKRDATVPVCSFYESYDAHGKEMPLPEGVY-GLITHANIVVYSYYYLLDPKIAEVVS 582
Query: 231 VEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
E KN++++FDEAHN++ +C ++ S ++ L C
Sbjct: 583 KELSKNAVVVFDEAHNIDNVCIESMSIKITRRTLDKC 619
>gi|148706380|gb|EDL38327.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_a [Mus musculus]
Length = 942
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 158/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL------KLNFPLRVENPHV 468
+L + NP + + + E ++++ GT+ PM F ++L + + HV
Sbjct: 628 SLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHV 686
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I I+ GPS L +Y+ R+ + +E G + N+ +VP G++ F PSY
Sbjct: 687 IPPDNILPLIICSGPSNQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGVVCFLPSYEY 746
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS---- 584
+ Q A W T G LT R+ KK EP+++S + Y + S S
Sbjct: 747 LRQVHAHWDKT--GLLT----RLSVRKKIFQEPKRASQVEQVLMAYSKCIMSCSHSEGHL 800
Query: 585 -GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++ K YL+ G+
Sbjct: 801 TGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQP 860
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
L G +A+NQ++GR IRH+ D+ +I+ D R+A PS +++ WI+
Sbjct: 861 -------LPGTVLIENLCMKAINQSIGRAIRHQRDFASIVLLDHRYARPSILAKLPAWIR 913
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + +F RE+
Sbjct: 914 DRVEVKATFGPAFAAVRKFHREK 936
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 29/241 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q ++E+ S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 263 IYYCSRTHSQLAQFVREVLKSPFGKETRLVSLGSRQTLCVNEDVKNL-GSVQLMNDRCVD 321
Query: 153 LC-----KKGTN----RRCNHHSRVADYMKNNPH---LGDEPI----DIEDLVNIGRTFG 196
+ K GT +R + + N+ L DE + D+E LV +G+
Sbjct: 322 MQRSKREKNGTGEDKPKRKRQKIQTSCPFYNHEQMELLRDEILLEVKDMEQLVALGKEAR 381
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL + S
Sbjct: 382 ACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNIHST 441
Query: 257 DLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSK 316
+++ L S+ ++ R L N ++ +L LEK +A + N K
Sbjct: 442 EVNGSQLCQAHSQLLQYMERYRKR--------LKAKNLMYIKQILYLLEKFVAVLGGNVK 493
Query: 317 E 317
+
Sbjct: 494 Q 494
>gi|440895926|gb|ELR47985.1| Putative ATP-dependent RNA helicase DDX11, partial [Bos grunniens
mutus]
Length = 924
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 150/622 (24%), Positives = 263/622 (42%), Gaps = 96/622 (15%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 221 IYYCSRTHSQLAQFVHEVQKSPFGQDTRLVSLGSRQNLCVNGDVRKL-GSVQLINDRCVE 279
Query: 153 LCKKGTNRR--------------------CNHHS-RVADYMKNNPHLGDEPIDIEDLVNI 191
+ + R+ C +S +++ G + D+E LV +
Sbjct: 280 MQRSKHERKSITEEEEPTRRRRRQEPRATCPFYSYERLQLLRDEVLAGVK--DVEQLVAL 337
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICA 251
G CPY+ R +V PY L+ R+ G+ + +++ DEAHNL
Sbjct: 338 GEEAQACPYYGGRFAIPAAQLVVLPYQMLLHAPTRQAAGIRLQGQVVVIDEAHNLIDTIT 397
Query: 252 DAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEV 311
+ S ++ L S+ + R L N ++ LL LEK +A +
Sbjct: 398 NIHSVEVRGSQLCQAHSQLLQYTERYGKR--------LKAKNLMYIKQLLYLLEKFVAVL 449
Query: 312 PINSKE----LGFTKPGPYIYEL--------LADLNITQETAY--------KLIDIVEVA 351
N K+ ++ G + + + ++N+ + Y KL+ E
Sbjct: 450 GGNIKQNPNTQSLSQAGTELKTINDFLFQSKIDNINLFKVRRYCEKSKISRKLLGFTERY 509
Query: 352 AELLQEDKLQNKKSTTACRIESI------SNILKIIFRDKGTAHSAYYRVHVR------- 398
+L Q K S ++S+ + + + + A +HV
Sbjct: 510 GAVLVPSMEQPKLSGFQDFLQSLQPGVMAAPAAPVEVGEDRSPRPASPLMHVEGFLEALT 569
Query: 399 EADANAADVLKGKAS---RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL 455
A+ + +L + S +L + NP + + + E ++++ GT+ P+ F ++L
Sbjct: 570 TANQDGRVILSRQGSLSQSSLKFLLLNPAVHFAQVVK-ESRAVVIAGGTMQPVSDFREQL 628
Query: 456 KLNFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIV 509
+ E HVI I I+ GPS +L+ +Y+ R + E G +
Sbjct: 629 LAGAGVEAERVVEFSCGHVIPPDHILPLIICSGPSNQILDFTYQKRGLPQVMDETGRILC 688
Query: 510 NIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPL 569
N+ +VP G++ FFPSY Q A W+ + + R+ KK EPR+++
Sbjct: 689 NLCNVVPGGVVCFFPSYEYQHQVCAHWEKSG------LLARLTIRKKIFQEPRKANRVEQ 742
Query: 570 AIEDY----------MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAT 619
+ +Y + + T T GA+ +V GK+SEG++F+D GR VV+ GMP+
Sbjct: 743 VLLEYSSSGLVFPQHCGQARGTET-GALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPN 801
Query: 620 MTDPKVRLKREYLDLQAQSQGG 641
+ P+++ K YLD +S+ G
Sbjct: 802 IMSPELQEKMAYLDQTLRSRPG 823
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
T + GI FPF Y Q +M + Q L+ + ESPTGTG CL+C L+W +
Sbjct: 5 TQEAGGIHFPFPFTPYAIQKDFMAALYQVLEAGKIGIFESPTGTG---CLICGALSWLRD 61
Query: 63 L 63
Sbjct: 62 F 62
>gi|363728123|ref|XP_416375.3| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Gallus
gallus]
Length = 941
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 159/322 (49%), Gaps = 28/322 (8%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF----PLRVEN---PH 467
+L + NP + + + E ++I+ GT+ P+ F ++L L++ P R+ H
Sbjct: 632 SLKFLLLNPAVHFAKVVK-ECRAVIIAGGTMQPVADFREQL-LSYAGVDPARIVEFSCGH 689
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
VI + I I+ GPS L +Y+ RD + E G + N+ +VP G++ FFPSY
Sbjct: 690 VIPPENILPIILCSGPSNQQLEFTYQTRDLPQMMDETGRILCNLCNVVPGGVVCFFPSYD 749
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS----- 582
Q A W+ T G LT R+ KK EP++++ + +Y +K
Sbjct: 750 YEKQVYAHWEKT--GLLT----RLATKKKIFQEPKKANQVEQVLAEYAKCIKRCGQAGGQ 803
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGE 642
+GA+ +V GK+SEG++F+D GR V++ GMP+ + P+++ K +LD +
Sbjct: 804 MTGALLLSVVGGKMSEGINFSDDLGRCVIMVGMPYPNIKSPELQEKMTWLDKTMPRSASQ 863
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
L +AVNQ++GR IRH+ DY +I+ D R+A P+ +++ WI
Sbjct: 864 APSRVL--------IENLCMKAVNQSIGRAIRHQKDYASILLLDHRYARPAILNKLPQWI 915
Query: 703 QPHIQCYSKFGDVVYTLTRFFR 724
+ IQ FG L +F R
Sbjct: 916 RERIQVKPAFGSAFAELRKFHR 937
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 20/169 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + ++V LGSR+ LC++ EV L G+ Q N+ C
Sbjct: 263 IYYCSRTHSQLSQFVHEVQKSPFGKDTRLVSLGSRQNLCVNEEVRRL-GALQLINDRCTE 321
Query: 153 LCK-----------KGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGRTFGP 197
+ K +G RR + + L DE + DIE LV +G+
Sbjct: 322 MQKNKHEKKSDAEVEGKKRRVSRTVCPFYSYEQMQFLRDEVLVEVKDIEQLVTLGKETKA 381
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
CPY+ +R +V PY L+ R G+ K+ ++I DEAHNL
Sbjct: 382 CPYYGSRYAIPAAQLVVLPYQMLLHEATRSAAGIILKDQVVIIDEAHNL 430
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ Y Q +M + +L+ + ESPTGTGK+L L+C L+W
Sbjct: 52 FPYTPYRIQEQFMAALYAALEAGRIGIFESPTGTGKSLSLICGALSW 98
>gi|132566527|ref|NP_689651.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|380420356|ref|NP_001244073.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|74731686|sp|Q96FC9.1|DDX11_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=CHL1-related protein 1; Short=hCHLR1; AltName:
Full=DEAD/H box protein 11; AltName: Full=Keratinocyte
growth factor-regulated gene 2 protein; Short=KRG-2
Length = 970
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 146/607 (24%), Positives = 256/607 (42%), Gaps = 89/607 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + D+E L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA----EV 311
++S L S+ ++ R L N L+ +L LEK +A +
Sbjct: 408 VEVSGSQLCQAHSQLLQYVERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 312 PINSKELGFTKPGPYIYEL--------LADLNITQETAY--------KLIDIVEVAA--- 352
N ++ G + + + ++N+ + Y KL E
Sbjct: 460 KQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVF 519
Query: 353 ------------ELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA 400
+ LQ + + ++ A ES ++ L+ H + + A
Sbjct: 520 SSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPA---SPLMHIQGFLAALTTA 576
Query: 401 DANAADVLKGKAS---RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
+ + +L + S TL + NP + + + E ++++ GT+ P+ F Q+L
Sbjct: 577 NQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLA 635
Query: 458 NFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNI 511
+ E HVI I ++ G S L +++ R+ + E+G + N+
Sbjct: 636 CAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNL 695
Query: 512 ARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAI 571
+VP G++ FFPSY + Q A W+ + R+ KK EP+ + +
Sbjct: 696 CGVVPGGVVCFFPSYEYLRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVL 749
Query: 572 EDYMAKLKDTS-----TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
Y ++ +GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++
Sbjct: 750 LAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQ 809
Query: 627 LKREYLD 633
K YLD
Sbjct: 810 EKMAYLD 816
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|60811280|gb|AAX36168.1| DEAD/H box polypeptide 11 [synthetic construct]
Length = 971
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 146/607 (24%), Positives = 256/607 (42%), Gaps = 89/607 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + D+E L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIA----EV 311
++S L S+ ++ R L N L+ +L LEK +A +
Sbjct: 408 VEVSGSQLCQAHSQLLQYVERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 312 PINSKELGFTKPGPYIYEL--------LADLNITQETAY--------KLIDIVEVAA--- 352
N ++ G + + + ++N+ + Y KL E
Sbjct: 460 KQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVF 519
Query: 353 ------------ELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA 400
+ LQ + + ++ A ES ++ L+ H + + A
Sbjct: 520 SSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPA---SPLMHIQGFLAALTTA 576
Query: 401 DANAADVLKGKAS---RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
+ + +L + S TL + NP + + + E ++++ GT+ P+ F Q+L
Sbjct: 577 NQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLA 635
Query: 458 NFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNI 511
+ E HVI I ++ G S L +++ R+ + E+G + N+
Sbjct: 636 CAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNL 695
Query: 512 ARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAI 571
+VP G++ FFPSY + Q A W+ + R+ KK EP+ + +
Sbjct: 696 CGVVPGGVVCFFPSYEYLRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVL 749
Query: 572 EDYMAKLKDTS-----TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
Y ++ +GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++
Sbjct: 750 LAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQ 809
Query: 627 LKREYLD 633
K YLD
Sbjct: 810 EKMAYLD 816
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|169853182|ref|XP_001833272.1| transcription factor TFIIH complex subunit Rad15 [Coprinopsis
cinerea okayama7#130]
gi|116505650|gb|EAU88545.1| transcription factor TFIIH complex subunit Rad15 [Coprinopsis
cinerea okayama7#130]
Length = 789
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 32/310 (10%)
Query: 420 CFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGI 478
C +P +A++ F R S+++TSGT+SP+D + + L+ ++ P +T +
Sbjct: 442 CLDPSLAIKPVFERF--SSVVITSGTISPLDMYPKMLQFTPVVQETYPMTLTRNAFLPLV 499
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
+ G ++S + R+ + G+ +V ++IVPDG++ FFPSY M+ +A W +
Sbjct: 500 ITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGVVAFFPSYLYMESIVAAWND 559
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
G L +W KHK VE ++ +A+E+Y + GAV +V RGKVSE
Sbjct: 560 M--GILNEVW----KHKLIFVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSE 611
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G+DF + GRAV++ G+P+ ++ + EYL + + E+ L F
Sbjct: 612 GIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LGF-------- 659
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFG----- 713
A R Q VGRV+R + D+G +IF D+RFA ++S++ WI QC ++
Sbjct: 660 -DAMRTAAQCVGRVLRGKTDWGLMIFADKRFARSDKRSKLPRWIN---QCITETASNLST 715
Query: 714 DVVYTLTRFF 723
D+ TL++ F
Sbjct: 716 DMALTLSKLF 725
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 58/289 (20%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL +++++
Sbjct: 3 FYIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQQF 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
+ L +Y SRT ++ + + ELK YR
Sbjct: 63 FPTRRKL----------------------------VYCSRTVPEIEKALTELKRLMKYRI 94
Query: 122 KMVI---------------LGSREQLCIHREVSL-LRGSAQNNACRFL-----CKK---- 156
L SR+ LCI+ +V+ +G+ + CR L C+K
Sbjct: 95 DYAETEEEKEKERNFMGLGLTSRKNLCINPDVAREKKGTVVDARCRDLTNTAVCEKNREN 154
Query: 157 -GTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFA 215
G+ C+ H + M+ + +E ++ R CPYF R + DIV
Sbjct: 155 PGSVPVCDWHENLGK-MEPGTLIPQGIWTLEGVLEYARQKVICPYFAVRRMMGFADIVIY 213
Query: 216 PYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
Y+YL+DP + + + K++I++FDEAHN++ +C ++ S DL+ +L
Sbjct: 214 SYHYLLDPKVAEQVSKDISKDAIVVFDEAHNIDNVCIESLSIDLTRPML 262
>gi|375082618|ref|ZP_09729671.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus litoralis
DSM 5473]
gi|374742696|gb|EHR79081.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus litoralis
DSM 5473]
Length = 643
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 168/736 (22%), Positives = 299/736 (40%), Gaps = 145/736 (19%)
Query: 24 YMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSS 83
+++ V +++N N ++E+PTG GKT+ +L L + K +G
Sbjct: 17 FIKLVDNAVRNGENLVIEAPTGFGKTVSVLAGALPYAKDMGY------------------ 58
Query: 84 VNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLL 141
I+Y +RTH Q+ +VI+ELK + + + V SR++LC+H+ +
Sbjct: 59 ------------KIIYLARTHKQMDRVIEELKAISKKTHVSGVEFRSRKELCLHQYIQNF 106
Query: 142 RGSAQNN--ACRFLCKKGT-------NRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIG 192
A N C+ L K G ++ + Y P EPI + +
Sbjct: 107 APDAYNAMIVCKNLKKLGKCEFFENLKKKKEEFDELVQYFIQTPA---EPITV---LTYS 160
Query: 193 RTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEWKNSILIFDEAHNLEG 248
+ F CPY +TR++ D++ A Y Y+I+P R+ ++ + I+IFDEAHNL
Sbjct: 161 KMFDFCPYELTRKVALNSDVIVASYLYMINPAIRENFMSYFDFDYSDLIVIFDEAHNLPD 220
Query: 249 ICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEK-- 306
+A S +S + I EA DE + L L LE
Sbjct: 221 QAINALSDKVSIHSINRAIKEA---------------DEYKEHETANFLSIFLKGLENLY 265
Query: 307 -------RIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDK 359
++ EVPI P Y + L I + +++D + A + ++EDK
Sbjct: 266 QEKLKDMKVEEVPI--------LPESIFYHVFDVLGINERQLIRILDQMVKAGDAIREDK 317
Query: 360 LQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWW 419
++ + + + L + F G + ++ +L
Sbjct: 318 IE-RNLPPRSYVGRVGEFLLLWFALIGKEDYLF--------------LMSRDKGFSLELV 362
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL-----NFPLRV--ENPHVITSK 472
+P A+ V S I SGTL+P+++FA + + FP V EN V+ ++
Sbjct: 363 ALDPSKALSFIK--NVQSAIFMSGTLTPLEAFADIMGVEGRLKKFPRMVKRENALVLVAR 420
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
+ S+ + S+E ++L +V A+ +P + +F SY +++
Sbjct: 421 DV---------------STRGDERSLELYKKLARYVVEAAKFIPKNVGVFTASYEVLEGL 465
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
++ N +++ KK +++ L +A ++ + GAV V
Sbjct: 466 LSA--NVDVRIREETGKKVFIEKKG-ASSKENDLLVMAFKE------EAKKDGAVLLGVM 516
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
G+ SEG D++ VV+ G+P+A T P+V+ + Y + + +G Y
Sbjct: 517 GGRNSEGQDYSGDEMNGVVLVGIPYARPT-PRVQAQIRYFENKFPGKGRYY--------- 566
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKF 712
Y A R + QA GRV R + GAII D R S + + W++ ++ +
Sbjct: 567 ---GYILPAHRKLVQAAGRVHRSEEEKGAIIVLDYRLLWKSVQRDLPDWMRETLKPVT-L 622
Query: 713 GDVVYTLTRFFREERI 728
+ L F+R E+I
Sbjct: 623 ASMKRHLIDFYRGEKI 638
>gi|403220542|dbj|BAM38675.1| DNA excision-repair helicase [Theileria orientalis strain Shintoku]
Length = 851
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 147/576 (25%), Positives = 248/576 (43%), Gaps = 97/576 (16%)
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP-----------------------WFR 226
N G+ CPYFM R + +IV Y Y+IDP + +
Sbjct: 249 NTGKPSPICPYFMARRSIEHANIVVLNYQYMIDPKVSDAVFSHLCTESYLNMTKENPFSK 308
Query: 227 KGLGVEWKNS----------ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDI 276
+ L V + +++FDEAHN++ +C +A S +LS+ L S+ +
Sbjct: 309 EELIVPLTTNLGKDKTKLPIVVVFDEAHNIDNVCIEALSVELSTETLDNAYSDLTRLEEN 368
Query: 277 SSTRRG----------QSSDETLNPDNFAI-------LRALLL---------KLEKRIAE 310
+ R Q E N D+ I LRA +L K E I+
Sbjct: 369 VNELRQRDQQLLLEEYQKLVENTNFDSIDIEGYMNPVLRADILAKAVPGSIRKAEHFISF 428
Query: 311 VPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACR 370
+ + +G+ K YI A Y+ E+++E++Q + K +
Sbjct: 429 LKV---VIGYLKK--YIKVQEAKSEGPLMFLYRFEHETEISSEVMQHTYNRMKSLLNTLK 483
Query: 371 IESISNI----LKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIA 426
+ SI +I L + F +S + V V + D L L + C + IA
Sbjct: 484 LTSIGDITSLQLVVDFCTLVGTYSNGFIVIVEPYPTSTYDPL-------LQFSCLDASIA 536
Query: 427 MQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGY 486
M+ S++LTSGT+SP++ + + L L P + IV G +
Sbjct: 537 MKPVLD-NFQSVVLTSGTISPLEFYPKILNFTPVLTQSLPMSFDRDCLCPIIVSKGANQV 595
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
+++ + R I + G +++ + +PDG++ FFPSY M+ ++ W + G L +
Sbjct: 596 HISTKFDLRTDITVLRNYGALLIDFCKHIPDGIVCFFPSYAYMELILSHWYES--GILAS 653
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHA 606
I E HK +E + LA+ +Y K D GA+F ++CRGKV+EG+DF H
Sbjct: 654 IME----HKLIFMETKDPVTTTLALYNY-RKACDVG-RGALFLSICRGKVAEGIDFDRHY 707
Query: 607 GRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVN 666
GR VV+ G+PF ++ + +++ Q E+ ++F A R
Sbjct: 708 GRCVVLVGIPFQYTLSKVLKARLDFMRCNYGIQENEF----ITF---------DAMRQAA 754
Query: 667 QAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Q VGR+IR++ D+G ++F D R++ +KS++ WI
Sbjct: 755 QCVGRIIRNKADFGLMVFADSRYSRADKKSKLPPWI 790
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 53/164 (32%)
Query: 1 MPTYKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M + I GI+V FP+ + Y Q+ YM + +L K +A+LE PTGTGKT+ L
Sbjct: 1 MVKFNIEGIEVYFPYPKIYPEQIAYMRSLKNALDAKGHAVLEMPTGTGKTVALF------ 54
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSN 118
S V+S Q +L ++Y +RT ++ + + EL+
Sbjct: 55 ----------------------SFVSSYQLAKPELGKLVYCTRTIHEMEKSLLELREVIA 92
Query: 119 YRPKMVI-----------------------LGSREQLCIHREVS 139
YR + ++ L SR LCIH EVS
Sbjct: 93 YRNEQMVKKEESEKESSENKKKNGYFLAVGLCSRRNLCIHPEVS 136
>gi|383850774|ref|XP_003700951.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Megachile rotundata]
Length = 759
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 152/292 (52%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IAM+ F R + S+++TSGTLSP+D + + L + + + +
Sbjct: 433 LHFSCLDSSIAMKPIFDRFQ--SVVITSGTLSPLDMYPKILNFHPVIMSSFTMTLARPCL 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S Y R+ + + G +V A VPDGL+ FF SY M+ +A
Sbjct: 491 LPMIVAKGNDQVTISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLYMESVVA 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + + +++ +HK +E + S+ LA+ +Y+ ++ GAV +V RG
Sbjct: 551 AWYDQG------VVDQLQRHKLLFIETQDSAETSLALINYIKACENGR--GAVLLSVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + ++ L+F
Sbjct: 603 KVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDF----LTF---- 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG ++F D+RF+ ++S++ WIQ H+
Sbjct: 655 -----DAMRHAAQCVGRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHL 701
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 48/279 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + LLE P+GTGKT+ LL +A+
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMLELKRALDAKGHCLLEMPSGTGKTITLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
+ N + ++ ++Y SRT ++ +VI+ELK
Sbjct: 60 -------MLENPLDITK---------------LIYCSRTVPEIEKVIEELKKLMDYYEKE 97
Query: 117 SNYRPKMV--ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADY 171
+ +PK+V +L SR+ +CIH EVS R G + C L R N+ + + ++
Sbjct: 98 TGSKPKIVGLVLSSRKNMCIHPEVSREREGKIVDGRCHALTASYVRERHNYDESTPICNF 157
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E + I+DL + GR CPYF+ R IV Y+YL+DP
Sbjct: 158 YEGFDMEGKEQLMPPGIYSIDDLKDYGRDRNWCPYFLARFTILHAQIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
+ + E K+S+++FDEAHN++ +C D+ S ++ +L
Sbjct: 218 AESVSKELSKSSVVVFDEAHNIDNVCIDSMSVKINRRIL 256
>gi|29612643|gb|AAH49929.1| Ddx11 protein, partial [Mus musculus]
Length = 443
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 158/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL------KLNFPLRVENPHV 468
+L + NP + + + E ++++ GT+ PM F ++L + + HV
Sbjct: 129 SLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPMSDFREQLLACSGVEAGRVVEFSCGHV 187
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I I+ GPS L +Y+ R+ + +E G + N+ +VP G++ F PSY
Sbjct: 188 IPPDNILPLIICSGPSNQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGVVCFLPSYEY 247
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS---- 584
+ Q A W T G LT R+ KK EP+++S + Y + S S
Sbjct: 248 LRQVHAHWDKT--GLLT----RLSVRKKIFQEPKRASQVEQVLMAYSKCIMSCSHSEGHL 301
Query: 585 -GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++ K YL+ G+
Sbjct: 302 TGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPRTQGQP 361
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
L G +A+NQ++GR IRH+ D+ +I+ D R+A PS +++ WI+
Sbjct: 362 -------LPGTVLIENLCMKAINQSIGRAIRHQRDFASIVLLDHRYARPSILAKLPAWIR 414
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + +F RE+
Sbjct: 415 DRVEVKATFGPAFAAVRKFHREK 437
>gi|194912339|ref|XP_001982483.1| GG12711 [Drosophila erecta]
gi|190648159|gb|EDV45452.1| GG12711 [Drosophila erecta]
Length = 859
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 164/338 (48%), Gaps = 42/338 (12%)
Query: 402 ANAAD--VLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKL 457
+NA D +L TL + +P ++F+ + E +I++ GT+ P QELK
Sbjct: 547 SNAEDGRILLDPVGGTLKYVLLDPA---EQFADIVEEARAIVIAGGTMQP----TQELKE 599
Query: 458 NFPLRVEN-------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVN 510
R ++ HV+ + ++ GPSG L+ + +R S E QEL + N
Sbjct: 600 QLFTRCQDRLVERFYDHVVEDDAVLPFVISNGPSGAPLSFKFAHRASAEMLQELSMLLRN 659
Query: 511 IARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLA 570
+ ++VP G++ F PSY +D+ + + G L TI R K V S L
Sbjct: 660 LCQVVPGGVVCFLPSYEYLDKVYKYLEQS--GTLETIQCR-----KSVFREVSGSAEQL- 711
Query: 571 IEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKRE 630
+++Y +K ++ GA+ +V GK+SEGL+FAD GRAV++ G+P++ P++ + +
Sbjct: 712 LDNYALAIKKPASGGALLLSVVGGKLSEGLNFADDLGRAVLVVGLPYSNRQSPELGQRMQ 771
Query: 631 YLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA 690
YLD KL +G ++Y +AVNQ +GR +RH DY + D+RF+
Sbjct: 772 YLD------------AKLGPGAGNEYYENLCVKAVNQCIGRAVRHIKDYACVYLVDKRFS 819
Query: 691 HPSRKSQISLWIQPHI----QCYSKFGDVVYTLTRFFR 724
P + ++ WI HI FG V RFF+
Sbjct: 820 DPKIRGKLPKWISRHIVESNAANGGFGAVQARTARFFK 857
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 84/166 (50%), Gaps = 16/166 (9%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSA-QNNACRFL 153
I + SRTHSQL Q++ EL+ + + + V LGSR+QLC + +V L+ N C +
Sbjct: 190 IFFCSRTHSQLAQIVAELRKTPHGQSVRCVSLGSRQQLCGNPQVRRLKHVGLMNERCLDM 249
Query: 154 CKKGTNRRCNHHSRV-ADYMKNNPH--------LGD----EPIDIEDLVNIGRTFGPCPY 200
K + + SR+ A+ P L D EP+DIE+L N G G C Y
Sbjct: 250 ATKKSRPNPSKKSRLTAEANSRCPFKAAPLVESLRDLALSEPLDIEELANEGAACGGCSY 309
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+ +R + ++ PY L+ R LG+ K SI+I DEAHNL
Sbjct: 310 YASRSAVEHAQLILLPYQLLLQKSARNQLGISLKGSIVIVDEAHNL 355
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ Y Q M+++ + L+N + ESPTGTGK+L L C L W
Sbjct: 20 FPYPPYAIQEQLMQELFRVLENGQVGIFESPTGTGKSLTLTCGALTW 66
>gi|293350107|ref|XP_001070646.2| PREDICTED: probable ATP-dependent RNA helicase DDX11 [Rattus
norvegicus]
Length = 845
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL------KLNFPLRVENPHV 468
+L + NP + + + E ++++ GT+ P+ F ++L + + + HV
Sbjct: 531 SLKFLLLNPAVHFAQVVK-ECRALVIAGGTMQPVSDFREQLLACSGVEASRVVEFSCGHV 589
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I I+ GPS L +Y+ R+ + +E G + N+ +VP G++ F PSY
Sbjct: 590 IPPDNILPLIICSGPSNQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGMVCFLPSYEY 649
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS---- 584
+ Q A W T + R+ KK EP+++S + Y + S S
Sbjct: 650 LRQVHAHWDKTG------LLARLSVRKKIFQEPKRASQVEQVLTAYSTCIASCSHSEGHL 703
Query: 585 -GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++ K YLD G+
Sbjct: 704 TGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLDQTIPRTHGQP 763
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G +A+NQ++GR IRH+ D+ +I+ D R+A PS +++ WI+
Sbjct: 764 P-------PGTVLIENLCMKAINQSIGRAIRHQKDFASIVLLDHRYARPSILAKLPAWIR 816
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + +F RE+
Sbjct: 817 DRVEVKATFGPAFAAMRKFHREK 839
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 29/260 (11%)
Query: 96 TILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC- 150
+I Y SRTHSQL Q ++E++ S + ++V LGSR+ LC++ +V L GS N+ C
Sbjct: 159 SIYYCSRTHSQLAQFVREVQKSPFGKETRLVSLGSRQSLCVNEDVKSL-GSVHLMNDRCV 217
Query: 151 ----------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-----DIEDLVNIGRTF 195
R K RR + Y L + I D+E LV +G+
Sbjct: 218 DMQRRKHKKMRIGEDKPKRRRQKMQASCPFYNHEQMELLRDEILLEVKDMEQLVALGKEA 277
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL + S
Sbjct: 278 QACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNIHS 337
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
+++ L S+ ++ R L N ++ +L L+K +A + N
Sbjct: 338 TEVNGSQLCQAHSQLLQYMERYRKR--------LKAKNLMYIKQILYLLDKFVAVLGGNV 389
Query: 316 KELGFTKPGPYIYELLADLN 335
K+ T+ P L +N
Sbjct: 390 KQNPSTQSLPQTGSELQSIN 409
Score = 40.4 bits (93), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 24 YMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW-----RKSLGSFSTLGSQVNNQIS 78
+M ++ + L+ + ESPTGTGK+L L+C L+W +K L + + L + + S
Sbjct: 26 FMAELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKLQAEAGLLAPASGPTS 85
Query: 79 GSQSSVNSSQS 89
++SV SS S
Sbjct: 86 SGRNSVLSSSS 96
>gi|358369042|dbj|GAA85657.1| DEAD_2 protein [Aspergillus kawachii IFO 4308]
Length = 519
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 154/303 (50%), Gaps = 9/303 (2%)
Query: 408 LKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL-RVEN- 465
LK + L + +P +E + ++IL GT+SPM + L P R++
Sbjct: 12 LKEQGDIQLKYMLLDPTNQFRELVE-DARAVILAGGTMSPMTDYMNHLFSYVPASRLDTF 70
Query: 466 --PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
HVI + + A + G G + +Y RDS + +LG TI + ++PDG++ FF
Sbjct: 71 SYGHVIPPENLIAHTLVRGVQGSEFDFTYDVRDSEKMIMDLGRTIATLCHVIPDGVVAFF 130
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVV-EPRQSSLFPLAIEDYMAKLKDTS 582
PSY + + ++ WK + KKP++ E R ++ + AK D S
Sbjct: 131 PSYDYLGRVLSIWKKPMLSEQGQTVYGLIGQKKPILSESRDMTVTTEELLQTYAKTVD-S 189
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QSQG 640
GA+ +V GK+SEG++F+D GRAV+I G+PF + + K +Y++ + Q+ G
Sbjct: 190 GRGALLLSVVGGKLSEGINFSDKLGRAVLIVGLPFPNIRSAVWQAKIQYIEQKTHQQATG 249
Query: 641 GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISL 700
E + +G D+Y RAVNQ +GR IRHR+DY AI+ D R+ P ++++
Sbjct: 250 PEASRQSAAKAAGRDFYENSCMRAVNQCIGRAIRHRNDYAAIVLIDRRYDKPGIQAKLPA 309
Query: 701 WIQ 703
WI+
Sbjct: 310 WIK 312
>gi|392350937|ref|XP_237570.6| PREDICTED: probable ATP-dependent RNA helicase DDX11, partial
[Rattus norvegicus]
Length = 954
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL------KLNFPLRVENPHV 468
+L + NP + + + E ++++ GT+ P+ F ++L + + + HV
Sbjct: 433 SLKFLLLNPAVHFAQVVK-ECRALVIAGGTMQPVSDFREQLLACSGVEASRVVEFSCGHV 491
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I I+ GPS L +Y+ R+ + +E G + N+ +VP G++ F PSY
Sbjct: 492 IPPDNILPLIICSGPSNQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGMVCFLPSYEY 551
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS---- 584
+ Q A W T + R+ KK EP+++S + Y + S S
Sbjct: 552 LRQVHAHWDKTG------LLARLSVRKKIFQEPKRASQVEQVLTAYSTCIASCSHSEGHL 605
Query: 585 -GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++ K YLD G+
Sbjct: 606 TGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLDQTIPRTHGQP 665
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G +A+NQ++GR IRH+ D+ +I+ D R+A PS +++ WI+
Sbjct: 666 P-------PGTVLIENLCMKAINQSIGRAIRHQKDFASIVLLDHRYARPSILAKLPAWIR 718
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + +F RE+
Sbjct: 719 DRVEVKATFGPAFAAMRKFHREK 741
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 29/259 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNAC-- 150
I Y SRTHSQL Q ++E++ S + ++V LGSR+ LC++ +V L GS N+ C
Sbjct: 68 IYYCSRTHSQLAQFVREVQKSPFGKETRLVSLGSRQSLCVNEDVKSL-GSVHLMNDRCVD 126
Query: 151 ---------RFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPI-----DIEDLVNIGRTFG 196
R K RR + Y L + I D+E LV +G+
Sbjct: 127 MQRRKHEKMRIGEDKPKRRRQKMQASCPFYNHEQMELLRDEILLEVKDMEQLVALGKEAQ 186
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASF 256
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL + S
Sbjct: 187 ACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNLIDTITNIHST 246
Query: 257 DLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSK 316
+++ L S+ ++ R L N ++ +L L+K +A + N K
Sbjct: 247 EVNGSQLCQAHSQLLQYMERYRKR--------LKAKNLMYIKQILYLLDKFVAVLGGNVK 298
Query: 317 ELGFTKPGPYIYELLADLN 335
+ T+ P L +N
Sbjct: 299 QNPSTQSLPQTGSELQSIN 317
>gi|198436769|ref|XP_002122486.1| PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide
11 [Ciona intestinalis]
Length = 907
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 30/326 (9%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP--------LRVENPH 467
+ + NP Q+ E ++I+ GT+ P +L + H
Sbjct: 595 VKYLLLNPASHFQQILE-ECRALIVAGGTMQPSSCLIDQLLAKTESEKHRSRIVEFSCGH 653
Query: 468 VITSK-QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
VI K Q+ + GPSG +++ R + + E G ++NI+ I+P G++ FFPSY
Sbjct: 654 VIDGKRQLLPLALSSGPSGVEFEFTFQKRSNFKLIDETGRLLLNISNIIPGGVVCFFPSY 713
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS---T 583
+ W++ I R+ KK EP++++ + +Y +K+
Sbjct: 714 DYERFVVQRWQDAG------ILSRLEMKKKIFREPKKANEVDKLLTEYTRCVKNVGPGKQ 767
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD--LQAQSQGG 641
+G + +V GK+SEG++F+D GR VV+ G+P+ P++R K YLD ++ + G
Sbjct: 768 NGGLLLSVVGGKMSEGINFSDDLGRCVVMVGLPYPNSQSPELREKMNYLDRNMKCHTDGR 827
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
+G+ Y +AVNQ++GR IRHR+DY +II D+R++ PS +++ W
Sbjct: 828 ---------TAGQVHYENLCMKAVNQSIGRAIRHRNDYASIILLDKRYSRPSVANKLPKW 878
Query: 702 IQPHIQCYSKFGDVVYTLTRFFREER 727
I H+ + KFG ++ +FF ++
Sbjct: 879 ISNHLSSHEKFGSAFASIKQFFHNKK 904
Score = 73.9 bits (180), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 33/195 (16%)
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELKTS-------------NYRPKMVILGSREQ 131
++ + + L I + SRTHSQL Q ++EL+ S +++ M LGSR
Sbjct: 209 DAGEEEEDHLTRIFFCSRTHSQLSQFVKELQKSPFGNNVHCDADEGDFQITMASLGSRNN 268
Query: 132 LCIHREVSLLRG-SAQNNACRFLCK-------------------KGTNRRCNHHSRVADY 171
LCI+ V L+ + N C + K K + C +++
Sbjct: 269 LCINDSVRKLKSVNLMNERCLEMQKNSKPKSKKEDDQDKPKRQKKVSKSTCCYYTNHDGI 328
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
+ + + DIE+++ G++ CPY+ +R +V PY L+ R+ G+
Sbjct: 329 AQLTNTIVGKIHDIEEVIKEGKSLEACPYYASRHAVTLSQLVVLPYQTLLHKATRQASGI 388
Query: 232 EWKNSILIFDEAHNL 246
+ K+S++I DEAHNL
Sbjct: 389 KLKDSVVIIDEAHNL 403
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
FPFE Y Q+ +M+ + ++++K + ESPTGTGK+L L+C +L W K
Sbjct: 19 FPFEPYSIQVDFMKSLYHAIEDKKIGIFESPTGTGKSLSLICGSLTWLK 67
>gi|242399192|ref|YP_002994616.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus sibiricus
MM 739]
gi|242265585|gb|ACS90267.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus sibiricus
MM 739]
Length = 643
Score = 152 bits (384), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 179/753 (23%), Positives = 314/753 (41%), Gaps = 156/753 (20%)
Query: 13 FPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+++ Q +++ V ++N N ++E+PTG GKT+ +L L + K +G
Sbjct: 5 FPYQSLRPNQEDFIKLVDTVVRNGENLVIEAPTGFGKTISVLAGALPYAKEMGY------ 58
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSR 129
I+Y +RTH Q+ +VI+ELK + + ++ V SR
Sbjct: 59 ------------------------KIIYLARTHKQMDRVIEELKAISNKTQVSGVEFRSR 94
Query: 130 EQLCIHREVSLLRGSAQNN--ACRFLCKKGT-------NRRCNHHSRVADYMKNNPHLGD 180
++LC+H+ V A N C+ L K G ++ +A Y P
Sbjct: 95 KELCLHQYVQNFAPDAYNAMIVCKNLKKLGKCEFFENLKKKKEEFDELAQYFVQKPA--- 151
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEWKNS 236
EP+ I + + CPY +TR++ D++ A Y Y+IDP R+ ++ +
Sbjct: 152 EPMMI---LTHSKMLDFCPYELTRKIAFNSDVIVASYLYMIDPAIRENFMAYFDFDYSDL 208
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
I+IFDEAHNL +A S LS + I EA DE +
Sbjct: 209 IVIFDEAHNLPNQAINALSDRLSVYSINRAIKEA---------------DEYKEHEIANF 253
Query: 297 LRALLLKLEK---------RIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDI 347
L L LE +I EVPI P Y + L I ++ +++D
Sbjct: 254 LSIFLKGLENLYQEKLRDLKIDEVPI--------IPESIFYHVFDVLKINEKQLIRILDQ 305
Query: 348 VEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADV 407
+ A + ++EDK++ + + + L + F G Y + RE
Sbjct: 306 MVKAGDAIREDKIE-RSLPPRSYVGRVGEFLLLWFALIGKED--YLFLMSRE-------- 354
Query: 408 LKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL-----NFP-- 460
KG +L +P A+ F + V S I SGT++P+++FA + + FP
Sbjct: 355 -KG---FSLELVALDPSKALS-FVK-NVQSAIFMSGTMTPLEAFADIMGIEGKLKKFPRI 408
Query: 461 LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLL 520
++ EN V+ +K + S+ + S+E +++ IV +++P +
Sbjct: 409 VKKENAIVLVAKDV---------------STRGDERSLELYKKMAKYIVEAVKLIPKNVG 453
Query: 521 IFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSS-----LFPLAIEDYM 575
+F SY +++ ++ N+ + + KK +E R +S L +A ++
Sbjct: 454 VFTASYEVLEGLLSA-------NVDIQIQEVS-GKKVFIEKRGASSKENDLLVMAFKE-- 503
Query: 576 AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
+ GAV V G+ SEG D++ V++ G+P+A T PKV+ + Y + +
Sbjct: 504 ----EAKRDGAVLLGVMGGRNSEGQDYSGDEMNGVILVGIPYARPT-PKVQAQIRYFENK 558
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
+G Y Y A + + QA GRV R + GA++ D R + +
Sbjct: 559 FPRKGRYY------------GYVLPAHKKLVQAAGRVHRSEEEKGAVVVLDYRLLWSNVR 606
Query: 696 SQISLWIQPHIQCYSKFGDVVYTLTRFFREERI 728
+ W++ I+ + + L F+R E+I
Sbjct: 607 KDLPDWMKETIKPVT-LASMKRHLIDFYRGEKI 638
>gi|366997945|ref|XP_003683709.1| hypothetical protein TPHA_0A01920 [Tetrapisispora phaffii CBS 4417]
gi|357522004|emb|CCE61275.1| hypothetical protein TPHA_0A01920 [Tetrapisispora phaffii CBS 4417]
Length = 773
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 149/288 (51%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGT+SP+D + + L L+ +T K
Sbjct: 435 LRFTCLDASIAIKPVFERF--SSVIITSGTISPLDMYPRMLNFTTVLQKSYTMTLTKKTF 492
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
I+ G ++S + R+ + G+ ++ A+I PDG+++FFPSY M+ I+
Sbjct: 493 LPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLIEFAKITPDGMVVFFPSYLYMESIIS 552
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ + G L +W KHK +VE + LA+E Y ++ GA+ F+V RG
Sbjct: 553 MWQ--TMGILDEVW----KHKLILVETPDAQETSLALETYRKAC--SNGRGAILFSVARG 604
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GR V++ G+PF ++ + E+L Q + ++ LSF
Sbjct: 605 KVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF---- 656
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF+ R++Q+ WI
Sbjct: 657 -----DAMRHAAQCLGRVLRGKDDYGVMVLADRRFSR--RRNQLPKWI 697
Score = 103 bits (256), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 135/283 (47%), Gaps = 51/283 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYHYMCDIKRTLDAGGNSILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRT 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFL----CKKGTNRRCNHHSR 167
K + L SR+ LC+H V+ R G+ + CR + K+ N ++
Sbjct: 95 KELGFKEEFRGLGLSSRKNLCLHPVVNKERKGTVVDEKCRRMTNGQAKRAIEADPNANAE 154
Query: 168 VADYMKN------NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
+ DY +N + +L + E L+ CPYF+ R + +I+ Y+YL+
Sbjct: 155 LCDYHENLYKLEVDDYLPNGVFSFEKLIKYCNDKTLCPYFIVRRMISMCNIIIYSYHYLL 214
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
DP + + E K+SI+IFDEAHN++ +C ++ S DL++ +L
Sbjct: 215 DPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTNDIL 257
>gi|195347574|ref|XP_002040327.1| GM18989 [Drosophila sechellia]
gi|194121755|gb|EDW43798.1| GM18989 [Drosophila sechellia]
Length = 868
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 164/334 (49%), Gaps = 34/334 (10%)
Query: 402 ANAAD--VLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKL 457
+NA D +L TL + +P ++F+ + E +I++ GT+ P ++L
Sbjct: 556 SNAEDGRILLDPVGGTLKYILLDPA---EQFADIVAETRAIVIAGGTMQPTQELKEQLFT 612
Query: 458 NFPLRVENP---HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
R+ HV+ + ++ GPSG L+ + +R S E +EL + N+ ++
Sbjct: 613 GCQDRLVERFYNHVVADDAVLPFVISNGPSGAPLSFKFAHRASAEMLRELSMVLRNLCQV 672
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
VP G++ F PSY +D+ + + G L TI R K V S L +++Y
Sbjct: 673 VPGGVVCFLPSYEYLDKVYKYLEQS--GTLETISCR-----KSVFREVSGSAEQL-LDNY 724
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
+K ++ GA+ +V GK+SEGL+FAD GRAV++ G+P++ P++R + ++LD
Sbjct: 725 ALAIKRPASGGALLLSVVGGKLSEGLNFADDLGRAVLVVGLPYSNSQSPELRQRMQHLD- 783
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
KL +G ++Y +AVNQ +GR +RH +DY + D+RFA P
Sbjct: 784 -----------EKLGPGAGNEYYENLCVKAVNQCIGRAVRHINDYACVYLLDKRFADPKI 832
Query: 695 KSQISLWIQPHI----QCYSKFGDVVYTLTRFFR 724
+ ++ WI HI FG V RFF+
Sbjct: 833 RGKLPKWISRHIVESNAANGGFGAVQARTARFFK 866
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSA-QNNACRFL 153
I + SRTHSQL Q++ EL+ + + + + LGSR+QLC + V L+ N C +
Sbjct: 197 IFFCSRTHSQLAQIVTELRKTPHGQSVRCISLGSRQQLCRNPAVRKLKHVGLMNERCLDM 256
Query: 154 CKKG--------------TNRRCNHHSRVADYMKNNPHLG-DEPIDIEDLVNIGRTFGPC 198
K TN RC + A +++ L EP+DIE+L N G G C
Sbjct: 257 ATKKARPNPSKKSRLTAETNSRCPF--KAASLVESLRDLALTEPLDIEELANEGTACGGC 314
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
Y+ +R + ++ PY L+ R LG+ K SI+I DEAHNL
Sbjct: 315 SYYASRSAVEHAQLILLPYQLLLQKSARNQLGISLKASIVIVDEAHNL 362
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ Y+ Q M+++ Q L+ + ESPTGTGK+L L C L W
Sbjct: 27 FPYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTW 73
>gi|170089159|ref|XP_001875802.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649062|gb|EDR13304.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 157/332 (47%), Gaps = 29/332 (8%)
Query: 408 LKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFP-LRVEN- 465
L G+ + L + NP E E ++IL GT+SP+ +L + P RV +
Sbjct: 535 LNGENTVELQYQLLNPSPTFTEVVD-EARAVILAGGTMSPISDVVNQLFSHLPPTRVTSF 593
Query: 466 --PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
H+I + + A +V GP G L + ELG + N A +VP G+++FF
Sbjct: 594 SCGHIIPAINLQALVVCKGPRGGDLEFKAAQQGDPAVISELGQILFNFASLVPAGMIVFF 653
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK---- 579
PSY+ ++ A W T G L E+ K EP +S +++Y +
Sbjct: 654 PSYHFLNVAKAAW--TKSGML----EKFGLKKTTFFEPEESVDVEKVLQEYAKSITVCYQ 707
Query: 580 ----DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
GA+ FAV K+SEGL+FAD RAVVI G+PFA + P++R + +Y+
Sbjct: 708 ISSPTGKKGGALLFAVIGAKLSEGLNFADDLARAVVIVGLPFANLASPELRERMKYVKRL 767
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
+ +G + + Y AVNQ++GR +RH+ D+ +++ D R+A S +
Sbjct: 768 EEKRGD----------AAAELYENMCMNAVNQSIGRAVRHKGDWASLLLLDRRYATASIR 817
Query: 696 SQISLWIQPHIQCYSKFGDVVYTLTRFFREER 727
+++ WI + FG V + F++ +R
Sbjct: 818 NKLPKWIGSGLIVRDGFGPTVKEMGSFYKGKR 849
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 29/176 (16%)
Query: 97 ILYTSRTHSQLRQVIQEL-----------------KTSNY----RPKMVILGSREQLCIH 135
I Y SRTHSQL QV+ EL ++S Y + V LGSR+QLCI+
Sbjct: 199 IYYASRTHSQLAQVLPELSRLKLRHSLSSVQNHHSESSQYPTPPSTRTVSLGSRKQLCIN 258
Query: 136 REVSLLRGSAQN--NACRFLCKKGTNRRCNHHSRVADYMKN---NPHLGDEPIDIEDLVN 190
E LR +++ +CR L + +RC + R+ + +K + P DIEDL
Sbjct: 259 DE---LRAKSRDLDESCRELLGEKAEKRCQYLPRIEEDVKMLDFRDQILAYPKDIEDLAT 315
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
GR CPYF +R ++V PYN L+ R+ LG++ K+ I++ DEAHNL
Sbjct: 316 AGRHAHICPYFGSRRAIPQAELVTLPYNLLLQKSAREALGIDLKDQIVVIDEAHNL 371
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 13 FPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y Q+ M + S++ + ++ESPTGTGKTL LLCA L W
Sbjct: 14 FPYDPPYSIQVDLMRHLYTSIEQRAVTIVESPTGTGKTLSLLCAALTW 61
>gi|604371|gb|AAA85822.1| ERCC2/XPD [Xiphophorus maculatus]
Length = 760
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C +P IA++ F R + S+I+TSGTLSP+D + + L +
Sbjct: 429 ANPVLHFSCMDPSIAIKPVFQRFQ--SVIITSGTLSPLDIYPRILDFRPVTMASFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ IV G L+S + R+ + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAVVPDGIVAFFTSYVYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I K+K +E + ++ +A+E Y ++ GA+ +
Sbjct: 547 NIVASWYEQG------ILENIQKNKLIFIETQDAAETSMALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q +GR IR + DYG +IF D+R+A ++ ++ WIQ HI
Sbjct: 646 IRENDFLTFDAMRHAAQCLGRAIRGKTDYGLMIFADKRYARSDKRGKLPRWIQEHI 701
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 135/282 (47%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 IEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQRAFP 64
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPK- 122
T ++Y SRT ++ +V++EL K + K
Sbjct: 65 LDVT---------------------------KLIYCSRTVPEIEKVVEELRKLMEFYAKE 97
Query: 123 --------MVILGSREQLCIHREVSLLR-GSAQNNACRFLCKK--GTNRRCNHHSRVADY 171
+ L SR+ LCIH EVS LR G + C L R N + V +
Sbjct: 98 TGEVNNFLALSLSSRKNLCIHPEVSSLRFGKEVDGKCHSLTASYIRAQRHSNPNQPVCRF 157
Query: 172 MKNNPHLGDE-PI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ +G + P+ +++DL + GR G CPY++ R +IV Y+YL+DP
Sbjct: 158 YEEFDAVGRQVPLPAGIYNLDDLKDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E K S+++FDEAHN++ +C D+ S +++ + C
Sbjct: 218 ADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTVDRC 259
>gi|390961806|ref|YP_006425640.1| putative Rad3-related DNA helicase [Thermococcus sp. CL1]
gi|390520114|gb|AFL95846.1| putative Rad3-related DNA helicase [Thermococcus sp. CL1]
Length = 652
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 182/719 (25%), Positives = 309/719 (42%), Gaps = 139/719 (19%)
Query: 13 FPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+E+ Q ++E V ++++N NA++E+PTG GKT+ +L L K +G
Sbjct: 11 FPYESLRPNQREFIELVAETVRNGENAIIEAPTGFGKTVSVLAGILPQAKEMGY------ 64
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSR 129
+LY +RTH Q+ +VI+ELK N + K+ V L SR
Sbjct: 65 ------------------------KVLYLARTHRQMDRVIEELKVINRKAKVSGVELRSR 100
Query: 130 EQLCIHREVSLLRGSAQNN--ACRFLCKKGTNRRC----NHHSRVADYMKNNPHLGDEPI 183
++LC+H ++ A C+ L K G +C N + A++ + DEP
Sbjct: 101 KELCLHTYLTQFTSDAYTAMVVCKNLKKLG---KCEFYENEKKKKAEFDELVNFFLDEPS 157
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEWKNSILI 239
++++ T CPY +T+ + + D++ A Y YL+ P R+ L V++ + I++
Sbjct: 158 HPVEILSYAETLELCPYDLTKRMAEKADVIVASYLYLLSPSIRENFISSLDVDYSDLIVV 217
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCID------ISSTRRGQSSDETLNPDN 293
FDEAHNL A S +S + I EA + +S RG E L +
Sbjct: 218 FDEAHNLPDQAISALSDRISINTVNRAIKEADEYNEHEIANFLSIFGRGL---EILFQEK 274
Query: 294 FAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAE 353
A + + E P+ EL F+ ++ ++L L+ T+ L D+V V +
Sbjct: 275 LA---------SRDVQETPVQP-ELVFS----HVVDVLG-LD-TRWLVKTLNDMVAV-GD 317
Query: 354 LLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKAS 413
++ED+++ K + I + L + G + +L +
Sbjct: 318 AIREDRIEKGKPPRSY-IGRVGEFLLLWLSLIGREDYLF--------------LLSRERG 362
Query: 414 RTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL------NFPLRV--EN 465
+L +P A+ F R EV S I SGTL+P+++F + + FP V EN
Sbjct: 363 LSLELVALDPSKALG-FLR-EVQSAIFMSGTLTPLEAFRDVMGIERARLKKFPRMVKREN 420
Query: 466 PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPS 525
V+ +K + S+ SI+ +++ + IV A+++P + +F S
Sbjct: 421 AQVLVAKDV---------------STRGEERSIQVYRKMVDYIVEAAKLIPRNVGVFAAS 465
Query: 526 YYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM-AKLK-DTST 583
Y ++ ++ NL R+ + K V +Q + A D M A K
Sbjct: 466 YEVLQGLLSA-------NLQV---RLEETGKAVFIEKQGA--SSAENDAMVASFKAHAKG 513
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GAV V G+ SEG D++ V++ G+P+A T P+V+ + Y + + +G Y
Sbjct: 514 NGAVLLGVMGGRNSEGQDYSGDEMNGVILVGIPYARPT-PRVQAQVRYFERKFPDKGRYY 572
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Y A R + QA GRV R + G+II D R + + WI
Sbjct: 573 G------------YYLPAHRKLVQAAGRVHRSAEEKGSIIILDYRVLWRGIRKDLPDWI 619
>gi|348537926|ref|XP_003456443.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oreochromis niloticus]
Length = 760
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C +P IA++ F R + S+++TSGTLSP+D + + L +
Sbjct: 429 ANPVLHFSCMDPSIAIKPVFQRFQ--SVVITSGTLSPLDIYPRILDFRPVTMASFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ IV G L+S + R+ + GN ++ ++ IVPDG++ FF SY M+
Sbjct: 487 RTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYVYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + ++ +A+E Y ++ GA+ +
Sbjct: 547 NIVASWYEQG------ILENIQRNKLIFIETQDAAETSMALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVLMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG +IF D+R+A ++ ++ WIQ HI
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHI 701
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 56/286 (19%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 IEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQRAF- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--------- 115
++ ++Y SRT ++ +V++EL+
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVVEELRKLMEFYTKE 97
Query: 116 ---TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSR---- 167
++N+ + L SR+ LCIH EVS LR G + C L + R HHS
Sbjct: 98 TGESNNFLA--LALSSRKNLCIHPEVSSLRFGKEVDGKCHSLT--ASYIRAQHHSNPNLP 153
Query: 168 VADYMKNNPHLGDE-PI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
V + + +G + P+ +++DL GR G CPY++ R +IV Y+YL+
Sbjct: 154 VCRFYEEFDSVGRQVPLPAGIYNLDDLKAFGRRKGWCPYYLARYSILHANIVVYSYHYLL 213
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
DP + E K S+++FDEAHN++ +C D+ S +++ L C
Sbjct: 214 DPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRC 259
>gi|156846864|ref|XP_001646318.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156116993|gb|EDO18460.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 776
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 147/287 (51%), Gaps = 24/287 (8%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
L + C + IA++ + S+I+TSGT+SP+D + + L N L +T K
Sbjct: 435 LRFTCLDASIAIKPVFE-KFSSVIITSGTISPLDMYPRMLNFNTVLEKSYAMTLTKKSFL 493
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
IV G ++S + R+ + G+ +V A+I PDG+++FFPSY M+ I+
Sbjct: 494 PMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIISM 553
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGK 595
W+ + G L +W KHK +VE + LA+E Y ++ GA+ +V RGK
Sbjct: 554 WQ--TMGILDEVW----KHKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGK 605
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGED 655
VSEG+DF H GR V++ G+PF ++ + E+L Q + ++ LSF
Sbjct: 606 VSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF----- 656
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF+ R++Q+ WI
Sbjct: 657 ----DAMRHAAQCLGRVLRGKDDYGVMVLADRRFSR--RRNQLPKWI 697
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 53/284 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYHYMCDMKKTLDAGGNSILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL+ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALIELENLMDYRS 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
+ + L SR+ LC+H +VS R G+ + CR + R+
Sbjct: 95 RELGYAEDFRGLGLTSRKNLCLHPQVSKERKGTVVDEKCRRMTNGQAKRKLESDPEAKVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C++H + D ++ +L E L+ CPYF+ R + +I+ Y+YL
Sbjct: 155 LCDYHENLYD-LEIEDYLPKGVYSFERLLKYCEQKTLCPYFIVRRMISMCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
+DP + + E K+SI+IFDEAHN++ +C ++ S DL++ +L
Sbjct: 214 LDPKIAERVSREVSKDSIVIFDEAHNIDNVCIESLSLDLTNDML 257
>gi|18543219|ref|NP_569898.1| CG11403 [Drosophila melanogaster]
gi|6018910|emb|CAB58099.1| EG:33C11.2 [Drosophila melanogaster]
gi|7290134|gb|AAF45598.1| CG11403 [Drosophila melanogaster]
gi|16197995|gb|AAL13769.1| LD24267p [Drosophila melanogaster]
gi|220945784|gb|ACL85435.1| CG11403-PA [synthetic construct]
gi|220955538|gb|ACL90312.1| CG11403-PA [synthetic construct]
Length = 861
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 164/334 (49%), Gaps = 34/334 (10%)
Query: 402 ANAAD--VLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKL 457
+NA D +L TL + +P ++F+ + E +I++ GT+ P ++L
Sbjct: 549 SNAEDGRILVDPVGGTLKYILLDPA---EQFADIVAEARAIVIAGGTMQPTKELKEQLFT 605
Query: 458 NFPLRVENP---HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
R+ HV+ + I ++ GPSG L+ + +R S E +EL + N+ ++
Sbjct: 606 GCHDRLVERFYNHVVANDAILPFVISNGPSGAPLSFKFAHRGSAEMLRELSMILRNLCQV 665
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
VP G++ F PSY +D+ + + G L TI R K V S L +++Y
Sbjct: 666 VPGGVVCFLPSYEYLDKVYKYLEQS--GTLETISGR-----KSVFREVSGSAEQL-LDNY 717
Query: 575 MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
+K ++ GA+ +V GK+SEGL+FAD GRAV++ G+P++ P++R + ++LD
Sbjct: 718 ALAIKRPASYGALLLSVVGGKLSEGLNFADDLGRAVLVVGLPYSNSLSPELRQRMQHLD- 776
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
KL +G ++Y +AVNQ +GR +RH DY + D+RFA P
Sbjct: 777 -----------EKLGPGAGNEYYENLCVKAVNQCIGRAVRHIKDYACVYLLDKRFADPKI 825
Query: 695 KSQISLWIQPHI----QCYSKFGDVVYTLTRFFR 724
+ ++ WI HI FG V RFF+
Sbjct: 826 RGKLPKWISRHIVEANAANGGFGAVQGRTARFFK 859
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSA-QNNACRFL 153
I + SRTHSQL Q++ EL+ + + + + LGSR+QLC + V L+ N C +
Sbjct: 190 IFFCSRTHSQLAQIVAELRKTPHGQSVRSISLGSRQQLCGNPAVRKLKHVGLMNERCLDM 249
Query: 154 CKKGT--------------NRRCNHHSRVADYMKNNPHLG-DEPIDIEDLVNIGRTFGPC 198
K N RC + A +++ L EP+DIE+L N G G C
Sbjct: 250 ATKKARPNPSKKSRLTAEANSRCPF--KAASLVESLRDLALTEPLDIEELANEGTACGGC 307
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
Y+ +R + ++ PY L+ R LG+ K SI+I DEAHNL
Sbjct: 308 SYYASRSAVEHAQLILLPYQLLLQKSARNQLGISLKGSIVIVDEAHNL 355
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ Y+ Q M+++ Q L+ + ESPTGTGK+L L C L W
Sbjct: 20 FPYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTW 66
>gi|84999674|ref|XP_954558.1| rad3-like DNA helicase-related [Theileria annulata]
gi|65305556|emb|CAI73881.1| rad3-like DNA helicase-related, putative [Theileria annulata]
Length = 894
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/568 (24%), Positives = 239/568 (42%), Gaps = 100/568 (17%)
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW------------KNS--- 236
GR CPYF R +IV Y YLIDP + K+S
Sbjct: 310 GRPSPICPYFAARRAIDDANIVVLNYQYLIDPKVSDAVFYHLCTESYLKEKRDDKDSKPK 369
Query: 237 ---ILIFDEAHNLEGICADAASFDLSSGLLTAC---ISEAKNCID--------------- 275
+++FDEAHN++ +C +A S +LS+ L +S +N +
Sbjct: 370 LPIVVVFDEAHNIDNVCIEALSVELSTETLDNAYSDLSRLENSVRELRLRDEELLLEEYR 429
Query: 276 --ISSTRRGQSSDE-TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLA 332
+ +T G + E +NP +LR + R+ I E ++
Sbjct: 430 RLVETTDFGSADIEGYMNP----LLRQ---DIVDRVMPGSIRKAE-----------HFIS 471
Query: 333 DLNITQETAYKLIDIVEVAAE--LLQEDKLQNKKST-------TACRIESISNILKIIFR 383
L + K I + E +E L+ + QN+ T R +S+ N LK+
Sbjct: 472 FLKVVIGYLKKYIKVKEPKSEGPLMFLYRFQNETGIISDVFQHTYNRFKSLLNTLKMTVG 531
Query: 384 DKGTAH---------SAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLE 434
+ H YY+ + D + + C + +AM+
Sbjct: 532 NLTALHLVIDFCSLVGTYYKGFIIIVDPFPKS---AAYDPVIQFSCLDASVAMKPVLE-N 587
Query: 435 VGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRN 494
S+ILTSGT+SP++ + + L + L P + + + IV G + + + +
Sbjct: 588 FQSVILTSGTMSPLEFYPKILNFSPILTQSLPMSLDRECLCPIIVSKGDNQVHMTTKFDL 647
Query: 495 RDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH 554
R I + G+ ++ + + +PDG++ FFPSY M+ ++ W T I I H
Sbjct: 648 RKDITLLRNYGSLVIELCKSIPDGVVCFFPSYAYMELILSHWYETG------ILSSIMSH 701
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
K +E ++S LA+ +Y + + G +F +VCRGKV+EG+DF H GR V++ G
Sbjct: 702 KLVFIETKESISTSLALHNY--RRACDAGRGGLFLSVCRGKVAEGIDFDMHYGRCVILIG 759
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+PF ++ + +++ + G + ++F A R Q +GRVIR
Sbjct: 760 IPFQYTLSRTLKARLDFM----RCNYGILESEFITF---------DAMRQAAQCIGRVIR 806
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWI 702
++ DYG ++ D R+ ++S++ +WI
Sbjct: 807 NKGDYGLMVLADSRYTRVGKRSKLPVWI 834
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 36/175 (20%)
Query: 1 MPTYKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M + I GI+V FP+ + Y Q+ YM+ + L +K +A+LE PTGTGKT+ L ++
Sbjct: 1 MVRFWIEGIEVYFPYPKIYPEQIAYMKSLKNVLDSKGHAVLEMPTGTGKTVALFSFVSSY 60
Query: 60 R--------------------KSLGSFSTLGSQVNNQISGSQSSV--------------N 85
+ K+L S + S N+Q++ SS
Sbjct: 61 QLAKPELGKLVYCTRTIHEMEKALNELSVVISYRNSQLNIDHSSTYEGSNSYKTSNNMNE 120
Query: 86 SSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVILGSREQLCIHREVS 139
++Q+ + ++ + + +V Q+++T N V L SR LCIH EVS
Sbjct: 121 TNQNYIKNINSVKHMKEEKNVKIKVEQDVETPQNDHFLAVGLCSRRNLCIHPEVS 175
>gi|332232623|ref|XP_003265503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4
[Nomascus leucogenys]
Length = 880
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 568 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 626
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E G + N+ +VP G++ FFPSY
Sbjct: 627 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFPSYEY 686
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + +R+ KK EP+ + + Y ++
Sbjct: 687 LRQVHAHWEKGG------LLDRLAARKKIFQEPKSAHQVEQVLLAYSRCIQGCGQERGRV 740
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K YLD G+
Sbjct: 741 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQA 800
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 801 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 853
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
+ S FG + + +F RE+
Sbjct: 854 ARVDVKSTFGPAIAAVQKFHREK 876
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 203 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 261
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 262 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALADVKDIEQLLALGKEA 321
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 322 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 381
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 382 VEVSGSQLCQAHSQLLQYMERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 433
Query: 316 KE 317
K+
Sbjct: 434 KQ 435
>gi|332026203|gb|EGI66345.1| TFIIH basal transcription factor complex helicase subunit
[Acromyrmex echinatior]
Length = 774
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 152/292 (52%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R + S+++TSGTLSP+D + + L + + + +
Sbjct: 448 LHFSCLDSSIAIKPIFDRFQ--SVVITSGTLSPLDMYPKVLNFHPVIMSSFTMTLARPCL 505
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S Y R+ + + G +V A VPDGL+ FF SY M+ +A
Sbjct: 506 LPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFTSYLYMESVVA 565
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + + +++ +HK +E + S+ LA+ +Y+ ++ GAV +V RG
Sbjct: 566 AWYDQG------VVDQLQRHKLLFIETQDSAETSLALINYIKACENGR--GAVLLSVARG 617
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + ++ L+F
Sbjct: 618 KVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDF----LTF---- 669
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG ++F D+RF+ ++S++ WIQ H+
Sbjct: 670 -----DAMRHAAQCVGRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHL 716
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 48/275 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ + L K + LLE P+GTGKT+ LL +A+
Sbjct: 20 VDGLIVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAY----- 74
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
+ + + ++ ++Y SRT ++ +VI+ELK
Sbjct: 75 -------MLEHPLDVTK---------------LIYCSRTVPEIEKVIEELKKLIDYYEKE 112
Query: 117 SNYRPKMV--ILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADY 171
+ +PK+V +L SR+ +CIH EVS R G + C L R N+ + + ++
Sbjct: 113 TKSKPKIVGLVLSSRKNMCIHPEVSREREGKIVDGRCHSLTASYVRERHNYDESTPICNF 172
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E I I+DL G+ CPYF+ R IV Y+YL+DP
Sbjct: 173 YEGFDMEGREQIMPPGIYSIDDLKEYGKDRNWCPYFLARFTILHAQIVVYSYHYLLDPKI 232
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS 259
+ + E ++S++IFDEAHN++ +C D+ S ++
Sbjct: 233 AETVSKELSRSSVVIFDEAHNIDNVCIDSMSVKIN 267
>gi|332232617|ref|XP_003265500.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1
[Nomascus leucogenys]
Length = 906
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E G + N+ +VP G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + +R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLDRLAARKKIFQEPKSAHQVEQVLLAYSRCIQGCGQERGRV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 827 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
+ S FG + + +F RE+
Sbjct: 880 ARVDVKSTFGPAIAAVQKFHREK 902
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALADVKDIEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYMERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|169806052|ref|XP_001827771.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|161779057|gb|EDQ31083.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 579
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 170/700 (24%), Positives = 290/700 (41%), Gaps = 151/700 (21%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLL--CATLAWRKSLGSFSTLG 70
FP+E YD Q +++ I+ + + + SPTGTGKT+ LL C A+
Sbjct: 6 FPYELYDIQNQFIDDAIKVISDGKIGIFSSPTGTGKTISLLSVCTNFAYHD--------- 56
Query: 71 SQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMVILGSRE 130
N+ + S N ++ I Y SRTH+QL QV+ EL T+ + VILGSR+
Sbjct: 57 ---NDNLYNLLFSANKTK--------IYYCSRTHTQLAQVLHELDTNIHHYNTVILGSRK 105
Query: 131 QLCIHREVSLLRGSAQ-NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLV 189
CIH S + N+ C L N +C ++ + + Y N + +L
Sbjct: 106 LYCIHPIQSTCNDIEELNSKCHELI---VNNKCEYY-KGSFYQSGNA-------SVNELR 154
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGI 249
G CPY+ +++ +IV PYN L R + ++ I+I DEAHN I
Sbjct: 155 QKGLCEKFCPYYYSKDRAAMCEIVLLPYNLLFTQEGRNSVDIDIDGKIVIVDEAHN---I 211
Query: 250 CADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLK-LEKRI 308
C + + L+ I + C ISS + I + L + + I
Sbjct: 212 CDTIIELN-TVELIFNEIKKIGYCKGISSNLKD------------IITKILYFQNVTTNI 258
Query: 309 AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTA 368
++ I+ E ++ + Y + DI E ++ +KL + +
Sbjct: 259 SDTIISVDEF---------------IHKARLEHYNMFDI----EEFIKSNKLAQRNNNPF 299
Query: 369 CRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQ 428
I S LK++ +N+ D++ +R + + +P + ++
Sbjct: 300 --IFKFSRFLKLL------------------TFSNSNDIIVYNKTR-IKFTPLSPQLYLK 338
Query: 429 EFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLL 488
E + + S++ GT+ P+D A P++ N HV +++ I I+ + +
Sbjct: 339 ELYKCK--SVLFAGGTMEPIDQLASIFD---PIKYYNYHV-SNRHILPIILGTDITNKEI 392
Query: 489 NSSYRNRDSIEYKQELGNTIVNIARIVPD-GLLIFFPSYYLMDQCIACWKNTSHGNLTTI 547
Y NRD + + T+ +++ I + G+++FFPS T
Sbjct: 393 CLIYDNRDRL--LNPILKTLYSLSYIAKNGGVIVFFPS-------------------KTF 431
Query: 548 WERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAG 607
E I K V R+ P+ +D K + F V GK+SEG++F D A
Sbjct: 432 LELI-KQNMDVNSFRK----PIYFDDSFELFKQNQ---GILFTVMGGKLSEGINFEDDAC 483
Query: 608 RAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQ 667
R +++ G+PF + T + K+ ++ SQ G QA VNQ
Sbjct: 484 RLLIVVGVPFPSNT---IEFKKR---IRHDSQYGI----------------NQAMNKVNQ 521
Query: 668 AVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A+GR IRH +DY A++ D R+ + S++S WI ++
Sbjct: 522 AIGRAIRHANDYAAVVLMDIRYKRFT--SKLSPWINSKLK 559
>gi|383410919|gb|AFH28673.1| putative ATP-dependent RNA helicase DDX11 isoform 1 [Macaca
mulatta]
Length = 906
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E G + N+ +VP G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G++ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 827 P-------PGKNLVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAVQKFHREK 902
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYMERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGTIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|355785871|gb|EHH66054.1| hypothetical protein EGM_02957 [Macaca fascicularis]
Length = 906
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E G + N+ +VP G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G++ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 827 P-------PGKNLVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAVQKFHREK 902
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 109/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYMERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGTIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|449448180|ref|XP_004141844.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cucumis sativus]
Length = 914
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 168/337 (49%), Gaps = 55/337 (16%)
Query: 437 SIILTSGTLSPMDSFAQEL-------KLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
+++L GTL P++ + L +LNF H++ + I V GPSG L +
Sbjct: 589 AVVLAGGTLQPIEETRERLFPWLPPSQLNF---FSCSHIVPPESILPMAVSSGPSGQLFD 645
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
SY R S +ELG + NI +VP+G+++FF S+ +Q WK + I +
Sbjct: 646 FSYNRRSSSAIVKELGLLLCNIVTVVPEGIVVFFSSFDYEEQVYGLWKTSG------ILD 699
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKL-----KD-----TSTSGAVFFAVCRGKVSEG 599
RI K K+ EPR+++ +++Y + KD STSGAV FAV GK+SEG
Sbjct: 700 RIMKKKRIFREPRKNTDVESVLKEYKENIDALSKKDPKQNILSTSGAVLFAVVGGKISEG 759
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ------------GGEYKETK 647
++ +D GR +V+ G+P+ + +D ++ + ++++ S G+ ET
Sbjct: 760 INLSDGMGRCIVMVGLPYPSPSDIELMERVKHIENLGNSNSIKSSKFYNDVPSGDV-ETG 818
Query: 648 LSFL----SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER---------FAHPSR 694
L L G+++Y +AVNQ++GR IRH +DY AI+ D R F+HP+
Sbjct: 819 LEILRSCKRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDVRYTSNSSKRSFSHPAD 878
Query: 695 KSQISLWIQP-HIQCYSKFGDVVYTLTRFFREERICG 730
K + WI+ I +G+V L +FF+ R G
Sbjct: 879 K--LPKWIKDCLIASTENYGEVHRRLNQFFKVNRKMG 913
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 91/175 (52%), Gaps = 26/175 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRGSAQ--NNACRF 152
+ + SRTHSQL Q I+EL+ + + ++ + LGSR+ CI+ EV L GSA N C
Sbjct: 213 VYFCSRTHSQLSQFIRELRKTVFASELNVICLGSRKIFCINEEV-LKLGSASHINEQCLE 271
Query: 153 LCKK------------GTNRRCNHHSRVADYMKNNPHLGD---------EPIDIEDLVNI 191
L KK G + + M NP L E +DIEDL+++
Sbjct: 272 LQKKKTTETSKAKKLAGAGKMSRTKASSGCPMLRNPKLQKNFRSQISQREALDIEDLIHL 331
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
GR G CPY+ +R L + D++ PY L+ R+ LG+ KNSI+I DEAHNL
Sbjct: 332 GRKVGTCPYYGSRSLVQGADLIVLPYQSLLSKSSRESLGLVLKNSIVIIDEAHNL 386
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y Q +M+ + + L ++LESPTGTGKTL ++C TL W
Sbjct: 14 FPYKPYSIQFDFMKALYEYLNKGGISMLESPTGTGKTLSIICGTLQW 60
>gi|355563978|gb|EHH20478.1| hypothetical protein EGK_03343 [Macaca mulatta]
Length = 906
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E G + N+ +VP G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G++ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 827 P-------PGKNLVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAVQKFHREK 902
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYMERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGTIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|389852278|ref|YP_006354512.1| DNA repair helicase rad3 [Pyrococcus sp. ST04]
gi|388249584|gb|AFK22437.1| DNA repair helicase rad3 [Pyrococcus sp. ST04]
Length = 639
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 171/729 (23%), Positives = 304/729 (41%), Gaps = 149/729 (20%)
Query: 13 FPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+++ Q ++E V +S++ + ++E+PTG GKT+ +L L + S G
Sbjct: 5 FPYKSLRPNQKEFIELVRESVKKGESLIVEAPTGFGKTISVLAGVLPYAISFGY------ 58
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT--SNYRPKMVILGSR 129
++Y +RTH Q+ +VI+ELK S R V SR
Sbjct: 59 ------------------------KVIYLARTHKQMDRVIEELKAIRSVARVSGVEFRSR 94
Query: 130 EQLCIHREVSLLRGSAQNN--ACRFLCKKG-------TNRRCNHHSRVADYMKNNPHLGD 180
+ LC+H + A + C+ L K G + + ++ P
Sbjct: 95 KDLCLHSYIQTFAQDAYTSMIVCKSLRKLGKCQFFENIKSKKEQVKEIIEFFLERPSFPS 154
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEWKNS 236
E ++ L+ + CPY +TR++ + +++ A Y Y+I+PW R+ LGV++ +
Sbjct: 155 EVLEYSQLLEL------CPYEITRKVGEKANVIVASYLYMINPWIRQAFMDSLGVDYSDL 208
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAI 296
I+IFDEAHN+ A S LS + I EA + ++ +
Sbjct: 209 IIIFDEAHNVPDQAISALSDRLSVRSIERAIKEAH-----------EYGEDDIEQFLLVF 257
Query: 297 LRALLLKLEKRIA-----EVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA 351
L+ L + KR+ EVP+ +E+ F P L I ++ L++I+
Sbjct: 258 LKGLEIIYNKRLENYETPEVPLKPEEI-FEHP----------LFILGYSSKDLVEIINYM 306
Query: 352 AEL---LQEDKLQNK---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAA 405
E+ ++EDK++ +S E + N L + R+ +H+ + N A
Sbjct: 307 VEIGDAIREDKIERNLPPRSYVGRVGEFLWNWLSLAGRED--------YLHLFSRERNLA 358
Query: 406 DVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL-----NFP 460
L +P +A+ +F + EV S I SGTL+P+++F + + FP
Sbjct: 359 ----------LELVALDPSVAL-DFLK-EVHSAIFMSGTLTPLEAFRDIIGVEAKTKKFP 406
Query: 461 --LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
++ EN V+ ++ + PS Y +++ I+ I+P
Sbjct: 407 RMVKSENAIVLVARDVSTRGEERSPSLY---------------KKIAEYILEAVSIIPKN 451
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
+ +F SY +++ ++ N I +++ KK ++ I ++
Sbjct: 452 VGVFTASYEVLEGILST--NVHIKIEEDIGKKVFIEKKDATSRENDAM----IAEFK--- 502
Query: 579 KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS 638
K+ GAV F V G+ SEG D++ VV+ G+P+A T P+V+ + Y + +
Sbjct: 503 KEAKKEGAVLFGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPT-PRVQAQIRYFEKKFPG 561
Query: 639 QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQI 698
+G Y Y A R + QA GRV R + G+I+ D R + K +
Sbjct: 562 KGRYYG------------YILPAHRKLAQAAGRVHRSAEERGSIVILDYRALWNNVKKDL 609
Query: 699 SLWIQPHIQ 707
WI +Q
Sbjct: 610 PDWIVETMQ 618
>gi|29792240|gb|AAH50522.1| DDX11 protein [Homo sapiens]
Length = 970
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 148/607 (24%), Positives = 258/607 (42%), Gaps = 89/607 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + D+E L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYVERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KELGFTKP-----------GPYIYELLAD-LNITQETAY--------KLIDIVEVAA--- 352
K+ T+ ++++ D +N+ + Y KL E
Sbjct: 460 KQNPNTQSLSQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVF 519
Query: 353 ------------ELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREA 400
+ LQ + + ++ A ES ++ L+ H + + A
Sbjct: 520 SSREQPKLAGFQQFLQSLQPRTTEALAAPADESQASTLRPA---SPLMHIQGFLAALTMA 576
Query: 401 DANAADVLKGKASRTLSWWCF---NPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL 457
+ + +L + S + S F NP + + + E ++++ GT+ P+ F Q+L
Sbjct: 577 NQDGRVILSRQGSLSQSTLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLA 635
Query: 458 NFPLRVEN------PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNI 511
+ E HVI I ++ G S L +++ R+ + E+G + N+
Sbjct: 636 CAGVEAERVVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNL 695
Query: 512 ARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAI 571
+VP G++ FFPSY + Q A W+ + R+ KK EP+ + +
Sbjct: 696 CGVVPGGVVCFFPSYEYLRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVL 749
Query: 572 EDYMAKLKDTS-----TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVR 626
Y ++ +GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++
Sbjct: 750 LAYSRCIQACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQ 809
Query: 627 LKREYLD 633
K YLD
Sbjct: 810 EKMAYLD 816
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|402885129|ref|XP_003906018.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Papio anubis]
Length = 845
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 533 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 591
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E G + N+ +VP G++ FFPSY
Sbjct: 592 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEY 651
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 652 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRV 705
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K YLD G+
Sbjct: 706 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQA 765
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G++ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 766 P-------PGKNLVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 818
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 819 ARVEVKATFGPAIAAVQKFHREK 841
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 203 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 261
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 262 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 321
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
CPY+ +R +V PY WF
Sbjct: 322 RACPYYGSRLAIPAAQLVVLPYQI---AWF 348
>gi|297261772|ref|XP_001114510.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like isoform 4 [Macaca mulatta]
Length = 910
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 598 TLKFLLLNPAVHFGQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 656
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E G + N+ +VP G++ FFPSY
Sbjct: 657 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCSVVPGGVVCFFPSYEY 716
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 717 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGRV 770
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K YLD G+
Sbjct: 771 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQA 830
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G++ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 831 P-------PGKNLVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 883
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 884 ARVEVKATFGPAIAAVQKFHREK 906
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 233 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 291
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 292 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 351
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL S
Sbjct: 352 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQAQVVIIDEAHNLIDTITGMHS 411
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 412 VEVSGSQLCQAHSQLLQYMERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 463
Query: 316 KE 317
K+
Sbjct: 464 KQ 465
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 9 TQKVGTIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 65
>gi|357624408|gb|EHJ75192.1| hypothetical protein KGM_19783 [Danaus plexippus]
Length = 736
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 147/293 (50%), Gaps = 24/293 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IAM+ F R + ++I+TSGTLSP+D + + L N + + I
Sbjct: 409 LHFSCMDSSIAMRPVFGRFQ--TVIITSGTLSPLDMYPKILDFNPVVMSSFTMTLARPCI 466
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S Y R+ + + G +V I+ VPDG++ FF SY ++ +
Sbjct: 467 LPMIVSKGSDQVAISSKYETREDVAVIRNYGQLLVEISACVPDGVVCFFTSYLYLESVVG 526
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + + + KHK +E + S+ A+ +Y+ + S GAV +V RG
Sbjct: 527 AWYDQG------VVANLQKHKLLFIETQDSAETSFALINYIKACE--SGRGAVLLSVARG 578
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q +
Sbjct: 579 KVSEGVDFDHHLGRAVLMFGIPYVFTQSRILKARLEYLRDQFQ-------------IREN 625
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
D+ A R Q VGR +R + DYG +IF D+RF+ ++S++ WIQ H++
Sbjct: 626 DFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRSDKRSKLPRWIQEHLR 678
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 47/255 (18%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M ++ ++L K + LLE P+GTGKT+ LL +A+ + N
Sbjct: 1 MLELKRALDAKGHGLLEMPSGTGKTISLLSLIVAY------------MIQN--------- 39
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELK--------TSNYRPKM--VILGSREQLCI 134
+ ++Y SRT ++ +V++ELK + +P + V+L SR+ LCI
Sbjct: 40 ------PHHVRKLIYCSRTVPEIEKVLEELKNLIKYYEKSQGEKPSLTGVVLSSRKNLCI 93
Query: 135 HREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRV--ADYMKNNPHLGDEPI------DI 185
H EVS R G + C L R V + + G E + +
Sbjct: 94 HPEVSREREGKLVDGKCHSLTASYIRDRHEQDPSVPICQFYEGFNREGRESMLPYGVYTM 153
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAH 244
+DL G CPYF++R +IV Y+YL+DP + + E K ++++FDEAH
Sbjct: 154 DDLKQYGADRNWCPYFLSRFAIIHAEIVVYSYHYLLDPKIAEVVSKELNKEAVVVFDEAH 213
Query: 245 NLEGICADAASFDLS 259
N++ +C D+ S ++
Sbjct: 214 NIDNVCIDSLSVKIT 228
>gi|159152200|gb|ABW92608.1| CG4078-PA [Drosophila melanogaster]
gi|159152202|gb|ABW92609.1| CG4078-PA [Drosophila melanogaster]
gi|159152204|gb|ABW92610.1| CG4078-PA [Drosophila melanogaster]
gi|159152206|gb|ABW92611.1| CG4078-PA [Drosophila melanogaster]
gi|159152208|gb|ABW92612.1| CG4078-PA [Drosophila melanogaster]
gi|159152210|gb|ABW92613.1| CG4078-PA [Drosophila melanogaster]
gi|159152212|gb|ABW92614.1| CG4078-PA [Drosophila melanogaster]
gi|159152214|gb|ABW92615.1| CG4078-PA [Drosophila melanogaster]
gi|159152218|gb|ABW92617.1| CG4078-PA [Drosophila melanogaster]
gi|159152220|gb|ABW92618.1| CG4078-PA [Drosophila melanogaster]
gi|295123967|gb|ADF79585.1| CG4078 [Drosophila melanogaster]
gi|295123969|gb|ADF79586.1| CG4078 [Drosophila melanogaster]
gi|295123973|gb|ADF79588.1| CG4078 [Drosophila melanogaster]
gi|295123975|gb|ADF79589.1| CG4078 [Drosophila melanogaster]
gi|295123977|gb|ADF79590.1| CG4078 [Drosophila melanogaster]
gi|295123979|gb|ADF79591.1| CG4078 [Drosophila melanogaster]
gi|295123981|gb|ADF79592.1| CG4078 [Drosophila melanogaster]
gi|295123983|gb|ADF79593.1| CG4078 [Drosophila melanogaster]
gi|295123985|gb|ADF79594.1| CG4078 [Drosophila melanogaster]
gi|295123987|gb|ADF79595.1| CG4078 [Drosophila melanogaster]
Length = 235
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 119/196 (60%), Gaps = 9/196 (4%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRG-SAQNNACR 151
+P ++Y SRTHSQL Q ++ELK + Y + V+LGSR+QLCIH EV +G S + N C+
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
T C+ RV + K++P L G +DIEDLV +G+ CPYF +REL
Sbjct: 96 LRVHSKT---CSFQMRV-ESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQA 151
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
DI F PYNYL+DP RK +E N+I+I DEAHN+E IC ++AS + S + I +
Sbjct: 152 DITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDV 211
Query: 271 KNCIDISSTRRGQSSD 286
+ + + ++ G+S D
Sbjct: 212 THIMQVFAS--GESQD 225
>gi|295123971|gb|ADF79587.1| CG4078 [Drosophila melanogaster]
Length = 235
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 119/196 (60%), Gaps = 9/196 (4%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRG-SAQNNACR 151
+P ++Y SRTHSQL Q ++ELK + Y + V+LGSR+QLCIH EV +G S + N C+
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
T C+ RV + K++P L G +DIEDLV +G+ CPYF +REL
Sbjct: 96 LRVHSKT---CSFQMRV-ESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQA 151
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
DI F PYNYL+DP RK +E N+I+I DEAHN+E IC ++AS + S + I +
Sbjct: 152 DITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDV 211
Query: 271 KNCIDISSTRRGQSSD 286
+ + + ++ G+S D
Sbjct: 212 THIMQVFAS--GESQD 225
>gi|395743927|ref|XP_002822926.2| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, partial
[Pongo abelii]
Length = 636
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 324 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 382
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E G + N+ +VP G++ FF SY
Sbjct: 383 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFSSYEY 442
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 443 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLVAYSRCIQACGQERGRV 496
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K YLD G+
Sbjct: 497 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKIAYLDQTLPRAPGQA 556
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WIQ
Sbjct: 557 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIQ 609
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
H++ + FG + + +F RE+
Sbjct: 610 AHVEVKATFGPAIAAVQKFHREK 632
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 161 RCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTFGPCPYFMTRELQKTVDIV 213
R +VA N+ +G DE + DIE L+ +G+ CPY+ +R +V
Sbjct: 36 RRRQEKQVACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEARACPYYGSRLAIPAAQLV 95
Query: 214 FAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNC 273
PY L+ R+ G+ ++ ++I DEAHNL S ++S L S+
Sbjct: 96 VLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHSQLLQY 155
Query: 274 IDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKE 317
++ R L N L+ +L LEK +A + N K+
Sbjct: 156 MERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNIKQ 191
>gi|18977305|ref|NP_578662.1| DNA repair helicase rad3 [Pyrococcus furiosus DSM 3638]
gi|18892976|gb|AAL81057.1| DNA repair helicase rad3, putative [Pyrococcus furiosus DSM 3638]
Length = 631
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 183/726 (25%), Positives = 308/726 (42%), Gaps = 153/726 (21%)
Query: 13 FPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+E Q ++E V ++++ N ++E+PTG GKT+ +L L + SLG
Sbjct: 7 FPYERLRPNQREFIEIVKEAVKRGENLIVEAPTGFGKTISVLAGVLPYAISLGY------ 60
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSR 129
++Y +RTH Q+ +VI+ELK R ++ + SR
Sbjct: 61 ------------------------KVVYLARTHKQMDRVIEELKKIRERNEVSGIEFRSR 96
Query: 130 EQLCIHREVSLLRGSAQNN--ACRFLCKKG-------TNRRCNHHSRVADYMKNNPHLGD 180
LC+H + A + C+ L K G + + + + N+P
Sbjct: 97 RDLCLHSYIQTFVQDAYTSMIVCKTLRKLGKCPFFENIKEKRDRVEEIVRFFLNSPPFPH 156
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEWKNS 236
E ++ +L+ + CPY +T+++ + +++ A Y Y+I P R+ LGV++ +
Sbjct: 157 EVLEYSELLEL------CPYEITKKIGEKANVIVASYLYMISPPIRQAFLENLGVDYSDL 210
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNF-- 294
I+IFDEAHNL A S LS + I EA+ G+ E NF
Sbjct: 211 IVIFDEAHNLPDQAISALSDRLSIRSIERAIKEAEEY--------GEKDIE-----NFLS 257
Query: 295 AILRALLLKLEKRI-----AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVE 349
+LR L + ++++ EVPI +E+ ++ +L +E L D++E
Sbjct: 258 ILLRGLEILYKEKLENYESEEVPIRPEEVFL-----HVASVLGWSG--REIGMMLEDMIE 310
Query: 350 VAAELLQEDKLQNK---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAAD 406
V + ++ED+++ +S E + N L + R+ Y + +E
Sbjct: 311 V-GDAIREDRIERNLPPRSYVGRVGEFLWNWLALRERED------YLHLFTKE------- 356
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ------ELKLNFP 460
+G A L +P +A++ EV S I SGTLSP+++F ELK FP
Sbjct: 357 --RGLA---LELVALDPSVALEFLE--EVHSAIFMSGTLSPLEAFRDIIGVKAELK-KFP 408
Query: 461 --LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
++ EN V+ ++ + + PS Y S Y I R P
Sbjct: 409 RMIKRENAIVLVARDVSTRGIERSPSLYRRISEY---------------IFEAVRNTPKN 453
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
+ +F SY +++ ++ H I E I KK +E R + P D M +
Sbjct: 454 VGVFTASYEVLEGILST---NVH---IKIEEEIG--KKVFIEKRDA---PSRENDEMIRA 502
Query: 579 --KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
+++ GAV F V G+ SEG D++ VV+ G+P+A T P+V+ + Y + +
Sbjct: 503 FKEESKGKGAVLFGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPT-PRVQAQIRYFEKKF 561
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
+G Y Y A R + QA GRV R + G+I+ D R S K
Sbjct: 562 PGKGRYYG------------YVLPAHRKLTQAAGRVHRSEEEKGSIVILDYRVLWKSVKK 609
Query: 697 QISLWI 702
+ W+
Sbjct: 610 DLPDWM 615
>gi|347365666|gb|AEO89688.1| ercc2 [Danio rerio]
Length = 760
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C +P IA++ F R + ++I+TSGTLSP+D + + L +
Sbjct: 429 ANPVLHFSCMDPSIAIKPVFGRFQ--TVIITSGTLSPLDIYPRILDFRPVTMASFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ IV G + S + R+ + GN ++ ++ IVPDG++ FF SY M+
Sbjct: 487 RTCLCPLIVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYMYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + ++ +A+E Y ++ GA+ +
Sbjct: 547 NIVASWYEQG------ILENIQRNKLIFIETQDAAETSMALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG +IF D+R+A ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHL 701
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 52/284 (18%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++K+
Sbjct: 5 IDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKTY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +V++EL K +Y K
Sbjct: 64 --------------------------PLEVTKLVYCSRTVPEIEKVVEELRKLMDYYSKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSR----VA 169
+ L SR+ LCIH EVS LR G + C L + R H S V
Sbjct: 98 TGVKNDFLALALSSRKNLCIHPEVSSLRFGKEVDGKCHSLT--ASYIRAQHQSNPNQPVC 155
Query: 170 DYMKNNPHLGDE-PI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
+ + ++G + PI +++DL + GR G CPYF+ R +IV Y+YL+DP
Sbjct: 156 QFYEEFDNVGRQVPIPPGIYNLDDLKDFGRRKGWCPYFLARYALLHANIVVYSYHYLLDP 215
Query: 224 WFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E K S+++FDEAHN++ +C D+ S +++ L C
Sbjct: 216 KIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRC 259
>gi|242024030|ref|XP_002432433.1| TFIIH basal transcription factor complex helicase subunit, putative
[Pediculus humanus corporis]
gi|212517866|gb|EEB19695.1| TFIIH basal transcription factor complex helicase subunit, putative
[Pediculus humanus corporis]
Length = 747
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 152/293 (51%), Gaps = 24/293 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IAM+ F R + S+++TSGTLSP+D + + L + + + +
Sbjct: 420 LHFSCLDSSIAMKPVFDRFQ--SVVITSGTLSPLDMYPKILDFHPVIMASFTMTLARPCL 477
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S + R+ + + G +V I+ +VPDG++ FF SY ++ +A
Sbjct: 478 LPMIVSKGNDQVAISSRFETREDVAVVRNYGQLLVEISSVVPDGVVCFFTSYLYLESVVA 537
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + + + KHK +E + ++ LA+ +Y+ + S GAV +V RG
Sbjct: 538 SWYDQG------VLNNLQKHKLLFIETQDAAETSLALLNYIKACE--SGRGAVLLSVARG 589
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ +R + +YL Q Q + ++ L+F
Sbjct: 590 KVSEGVDFDHHLGRAVLMFGIPYVYTQSRILRARLDYLRDQFQIRENDF----LTF---- 641
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGR +R + DYG +IF D+RF+ ++ ++ WIQ H++
Sbjct: 642 -----DAMRHAAQCVGRALRGKTDYGIMIFADKRFSRNDKRGKLPKWIQEHLK 689
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 51/266 (19%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ + L K + LLE P+GTGKT LL +++ +
Sbjct: 5 VDGLLVYFPYDYIYPEQYAYMIELKKGLDAKGHCLLEMPSGTGKTTTLLSLVVSYMLTYP 64
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
T ++Y SRT ++ +V++EL+
Sbjct: 65 LDVT---------------------------KLIYCSRTVPEIEKVVEELRLLFKYIEQE 97
Query: 117 SNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNP 176
+ KM+ L S+E RE ++ G + ++ ++ R N + D+ +
Sbjct: 98 TGKATKMLGLVSKE-----REGKVVDGRCHSLTASYIREQ---HRYNKSVPICDFYEGFD 149
Query: 177 HLGDE------PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
G E I+D+ N +T G CPYF+ R L +I+ Y+YL+DP +
Sbjct: 150 CFGREDSVMPGAYSIDDIKNYAQTKGYCPYFLARHLIAQANIIVYSYHYLLDPKIANVVS 209
Query: 231 VEW-KNSILIFDEAHNLEGICADAAS 255
E K ++++FDEAHN++ +C D+ S
Sbjct: 210 KELTKTAVVVFDEAHNIDNVCIDSMS 235
>gi|397651437|ref|YP_006492018.1| DNA repair helicase rad3 [Pyrococcus furiosus COM1]
gi|393189028|gb|AFN03726.1| DNA repair helicase rad3 [Pyrococcus furiosus COM1]
Length = 647
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 183/726 (25%), Positives = 308/726 (42%), Gaps = 153/726 (21%)
Query: 13 FPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+E Q ++E V ++++ N ++E+PTG GKT+ +L L + SLG
Sbjct: 7 FPYERLRPNQREFIEIVKEAVKRGENLIVEAPTGFGKTISVLAGVLPYAISLGY------ 60
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSR 129
++Y +RTH Q+ +VI+ELK R ++ + SR
Sbjct: 61 ------------------------KVVYLARTHKQMDRVIEELKKIRERNEVSGIEFRSR 96
Query: 130 EQLCIHREVSLLRGSAQNN--ACRFLCKKG-------TNRRCNHHSRVADYMKNNPHLGD 180
LC+H + A + C+ L K G + + + + N+P
Sbjct: 97 RDLCLHSYIQTFVQDAYTSMIVCKTLRKLGKCPFFENIKEKRDRVEEIVRFFLNSPPFPH 156
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEWKNS 236
E ++ +L+ + CPY +T+++ + +++ A Y Y+I P R+ LGV++ +
Sbjct: 157 EVLEYSELLEL------CPYEITKKIGEKANVIVASYLYMISPPIRQAFLENLGVDYSDL 210
Query: 237 ILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNF-- 294
I+IFDEAHNL A S LS + I EA+ G+ E NF
Sbjct: 211 IVIFDEAHNLPDQAISALSDRLSIRSIERAIKEAEEY--------GEKDIE-----NFLS 257
Query: 295 AILRALLLKLEKRI-----AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVE 349
+LR L + ++++ EVPI +E+ ++ +L +E L D++E
Sbjct: 258 ILLRGLEILYKEKLENYESEEVPIRPEEVFL-----HVASVLGWSG--REIGMMLEDMIE 310
Query: 350 VAAELLQEDKLQNK---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAAD 406
V + ++ED+++ +S E + N L + R+ Y + +E
Sbjct: 311 V-GDAIREDRIERNLPPRSYVGRVGEFLWNWLALRERED------YLHLFTKE------- 356
Query: 407 VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQ------ELKLNFP 460
+G A L +P +A++ EV S I SGTLSP+++F ELK FP
Sbjct: 357 --RGLA---LELVALDPSVALEFLE--EVHSAIFMSGTLSPLEAFRDIIGVKAELK-KFP 408
Query: 461 --LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDG 518
++ EN V+ ++ + + PS Y S Y I R P
Sbjct: 409 RMIKRENAIVLVARDVSTRGIERSPSLYRRISEY---------------IFEAVRNTPKN 453
Query: 519 LLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL 578
+ +F SY +++ ++ H I E I KK +E R + P D M +
Sbjct: 454 VGVFTASYEVLEGILST---NVH---IKIEEEIG--KKVFIEKRDA---PSRENDEMIRA 502
Query: 579 --KDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA 636
+++ GAV F V G+ SEG D++ VV+ G+P+A T P+V+ + Y + +
Sbjct: 503 FKEESKGKGAVLFGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPT-PRVQAQIRYFEKKF 561
Query: 637 QSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKS 696
+G Y Y A R + QA GRV R + G+I+ D R S K
Sbjct: 562 PGKGRYYG------------YVLPAHRKLTQAAGRVHRSEEEKGSIVILDYRVLWKSVKK 609
Query: 697 QISLWI 702
+ W+
Sbjct: 610 DLPDWM 615
>gi|328770056|gb|EGF80098.1| hypothetical protein BATDEDRAFT_11514, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 604
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 148/299 (49%), Gaps = 37/299 (12%)
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-------KLNFPLRVENPHVITSK 472
CF P + + S++ T GT+SP+ F ++L +L+ HVI S
Sbjct: 308 CFAPILK-------QARSVVFTGGTMSPIHDFIEQLLPSVQHDRLDV---FSCGHVINST 357
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
+ V GP+G N S+ R E G I N + ++ G+++FF SY +D
Sbjct: 358 SLLPICVSQGPTGLDFNFSHEKRVDTNMMDEAGAAIANYSNVISGGIVVFFVSYSYLDAI 417
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLK-----DTSTS--- 584
+ WK+ IW RI K KK +EP ++DY + + D STS
Sbjct: 418 VKQWKSGG------IWTRISKKKKIFIEPTSVGEVDKVLQDYSSTISRSRQTDFSTSTLT 471
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
G++ AV GK+SEG++FAD GRAV++ G+PFA + +++ + + D+Q + K
Sbjct: 472 GSMLLAVVSGKLSEGINFADDMGRAVIMVGIPFANIASIELQERMRFFDVQVNA-----K 526
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
ET S ++G+++Y R + GR IRH++DY IIF D RF +++ WI+
Sbjct: 527 ETG-SGITGKEYYENICMRVLCFVTGRAIRHKNDYAVIIFLDMRFKRDRIVAKLPEWIR 584
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 34/149 (22%)
Query: 122 KMVILGSREQLCIHREVSLLRGSAQ-NNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGD 180
K V LGSR+ LCI++ V+ L+ + N+ C L K +++ P+L +
Sbjct: 3 KCVTLGSRKNLCINQSVTRLQSLHRINDKCLDLQKDKSSKSSG----------GCPYLTE 52
Query: 181 EPI--------------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFR 226
+P+ DIE++V GR CPY+ R K+ +I+ PYN L+ R
Sbjct: 53 DPVQMVTFDDTIHARIRDIEEIVQAGRKSATCPYYGARHTAKSSEIICIPYNLLLQRSTR 112
Query: 227 KGLGVEWKNSILI---------FDEAHNL 246
+ +G+ KN+I+I DEAHN+
Sbjct: 113 ESIGLRLKNNIIILGKYTLFCLLDEAHNI 141
>gi|295123965|gb|ADF79584.1| CG4078 [Drosophila melanogaster]
Length = 234
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 9/204 (4%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRG-SAQNNACR 151
+P ++Y SRTHSQL Q ++ELK + Y + V+LGSR+QLCIH EV +G S + N C+
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
T C+ RV + K++P L G +DIEDLV +G+ CPYF +REL
Sbjct: 96 LRVHSKT---CSFQMRV-ESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQA 151
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
DI F PYNYL+DP RK +E N+I+I DEAHN+E IC ++AS + S + I +
Sbjct: 152 DITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDV 211
Query: 271 KNCIDISSTRRGQSSDETLNPDNF 294
+ + + ++ G+S P +F
Sbjct: 212 THIMQVFAS--GESDMAGDEPKDF 233
>gi|159152216|gb|ABW92616.1| CG4078-PA [Drosophila melanogaster]
Length = 234
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 9/204 (4%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRG-SAQNNACR 151
+P ++Y SRTHSQL Q ++ELK + Y + V+LGSR+QLCIH EV +G S + N C+
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
T C+ RV + K++P L G +DIEDLV +G+ CPYF +REL
Sbjct: 96 LRVHSKT---CSFQMRV-ESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQA 151
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
DI F PYNYL+DP RK +E N+I+I DEAHN+E IC ++AS + S + I +
Sbjct: 152 DITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDV 211
Query: 271 KNCIDISSTRRGQSSDETLNPDNF 294
+ + + ++ G+S P +F
Sbjct: 212 THIMQVFAS--GESDMAGDEPKDF 233
>gi|296423910|ref|XP_002841495.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637735|emb|CAZ85686.1| unnamed protein product [Tuber melanosporum]
Length = 748
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 173/729 (23%), Positives = 296/729 (40%), Gaps = 131/729 (17%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+KI ++V FP+ Y + YM + ++L + +LE P+GTGKT+ LL +A+++S
Sbjct: 45 FKIDELEVLFPYPRIYPGEWRYMTDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQS 104
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + ELK YR
Sbjct: 105 FPEPRKL----------------------------IYCSRTMSEIEKALAELKALMAYRS 136
Query: 122 KMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRR-CNHHSRVADYMKNNPHLGD 180
K LG E+ RGS + +G C H + D ++ + +
Sbjct: 137 KE--LGYVEEF---------RGSLTAGFVKEKKARGEEVEVCVFHDNL-DTLEPHNLITP 184
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILI 239
++ ++ G CPYF R + +++ Y+YL+DP + + E K+ I++
Sbjct: 185 GVYTLDGMLKYGEKHTQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVV 244
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
FDEAHN++ +C ++ S DL+ L A+N ++ S E L + ++
Sbjct: 245 FDEAHNIDNVCIESLSIDLTDDSLRRAARGAQN-LEKKINEMKASDAEKLQNEYKKLVEG 303
Query: 300 LL----LKLEKRIAEVPINSKEL------GFTKPGPYIYELLADLNITQETAYKLIDIV- 348
L E P+ K+L G + + L +T K++ ++
Sbjct: 304 LRDVDEGTEEDSFMANPVLPKDLLKEAIPGNIRRAEHFLAFLKRFVEYLKTRMKVLHVIS 363
Query: 349 EVAAELLQEDK---LQNKKSTTAC--RIESISNILKI--IFRDKGTAHSAYYRVHVREAD 401
E A LQ K KK C R+ S+ L++ I K A + V +
Sbjct: 364 ETPASFLQHLKDLTFIEKKPLRFCAERLTSLVRTLELANIEDYKSLQEVAMFATLVATYE 423
Query: 402 ANAADVLKGKASRT-------LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQ 453
+L+ S T L + C + IA++ F R S+++TSGT+SP++ + +
Sbjct: 424 KGFLLILEPFESETATVPNPILHFTCLDASIAIRPVFERF--SSVVITSGTISPLEMYPK 481
Query: 454 ELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
L+ N ++ + + IV G +++ + R+ + G+ +V ++
Sbjct: 482 MLQFNTVVQESYSMTLARRSFLPMIVTRGSDQVAVSTRFEIRNDPSVVRNYGSLLVEFSK 541
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
I PDG+++FFPSY M+ I+ W+ G L +W K+K +VE S LA+E
Sbjct: 542 ITPDGMVVFFPSYLYMESIISMWQGM--GILDEVW----KYKLILVETPDSQETSLALET 595
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y A C GR + T + ++
Sbjct: 596 YRT-------------ACCN-------------GRGAISTTIS---------------VE 614
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
L +S K LSF A R Q +GRV+R + DYG ++ D RF
Sbjct: 615 LCFESPSNTPKNDFLSF---------DAMRHAAQCLGRVLRGKDDYGIMVLADRRFG--K 663
Query: 694 RKSQISLWI 702
++SQ+ WI
Sbjct: 664 KRSQLPKWI 672
>gi|195049542|ref|XP_001992741.1| GH24926 [Drosophila grimshawi]
gi|193893582|gb|EDV92448.1| GH24926 [Drosophila grimshawi]
Length = 843
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 156/334 (46%), Gaps = 32/334 (9%)
Query: 402 ANAAD--VLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKL 457
+NAAD VL + TL + NP + F+ + E ++I+ GT+ P +L
Sbjct: 522 SNAADGRVLLNPKAGTLKYLLLNPA---EHFADIISEARALIIAGGTMQPTHELTAQLFA 578
Query: 458 NFPLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
+ P RV HV+ + ++P GP+G L SY R S EL + N+ +
Sbjct: 579 HCPERVVERFYSHVVPPDAVLPFVLPAGPTGTKLCFSYTQRTSFAMLNELRMVLQNLCSV 638
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDY 574
+P G++ F PSY ++ A H + +RI + K+ E ++ Y
Sbjct: 639 LPAGVVCFLPSYDYLETVYA------HLEQSGALQRIGQRKRIFREKAGGGGVEQLLQQY 692
Query: 575 MAKLKDTST---SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY 631
+ ++ GA+ +V GK+SEGL+FAD GR V++ G+P+ T P+++ + +
Sbjct: 693 ADAISQSAGPAGGGALLLSVVGGKLSEGLNFADDLGRGVIVVGLPYPNRTAPELKERMRH 752
Query: 632 LDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAH 691
LD L + +G ++Y +AVNQ +GR +RH DY + DER+A
Sbjct: 753 LD------------DTLGYAAGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLLDERYAS 800
Query: 692 PSRKSQISLWIQPHIQCYSK-FGDVVYTLTRFFR 724
+ ++ WI HI S FG V RFF+
Sbjct: 801 ERIQKKLPAWIARHIHVASDGFGAVQARTARFFK 834
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQNNACRFLC 154
I Y SRTH+QL Q++ EL+ + + + + LGSR QLCIH +V + A N R L
Sbjct: 187 IFYCSRTHAQLAQIVAELRKTPHGKSVRCISLGSRHQLCIHAQVRRISNVALINE-RCLD 245
Query: 155 KKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVF 214
C H + + L E +DIE+L G G CPY+ TR +V
Sbjct: 246 MARLKPSCPHKAPNQVQRMRDASL-SELMDIEELATQGAACGGCPYYATRSALAQAQLVL 304
Query: 215 APYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
PY L+ R+ LG++ + +++I DEAHNL A S +LS
Sbjct: 305 LPYPLLLQRSTRQQLGIDLRGAVIIVDEAHNLLDTIAQLHSSELS 349
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D FP+ Y Q M+++ L++K + ESPTGTGK+L L C L W
Sbjct: 15 DFGFPYTPYTIQEQLMQQLFLVLESKQIGIFESPTGTGKSLTLTCGALTW 64
>gi|299470611|emb|CBN80233.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 932
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 221/500 (44%), Gaps = 81/500 (16%)
Query: 206 LQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTA 265
L K IV PYNY++DP R + + + +++I DEAHN+EG+C DA S ++S + A
Sbjct: 3 LAKQAQIVLMPYNYILDPSVRSAMSLALEGAVVILDEAHNVEGVCRDAGSLEVSLLDMVA 62
Query: 266 CISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKL------EKRIAEVPINSKELG 319
S+ +C +++ G + +L ++KL E R E N +
Sbjct: 63 MASDLCDCSQLTACSLGAN-----------LLLKFVMKLLYFTSKESRTLEAFENETDFE 111
Query: 320 FTKPGPYIYELLADLNITQETAYKLIDIVEVAAELL-------QEDKLQNKKSTTACRIE 372
PG + +N K + A + +ED + S RI
Sbjct: 112 EPPPGARKKKQQEVINTAVPALLKKHWACDSAGSMFWAAFVGPEEDASTSHASLL--RIP 169
Query: 373 SISNILKIIF-RDKGTAHSAYYRV---------------HVREADANAADVLKGKA-SRT 415
+++N+ + +F G H Y V H R + +A+ L SR+
Sbjct: 170 ALNNLERFLFVTGLGLHHPHDYGVNVMSWDNVEKHKLPVHTRTSTRHASCPLGNSPFSRS 229
Query: 416 ---------LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV--- 463
L+ W +P + E + S+ILTSGTLSP+ S EL +F R+
Sbjct: 230 SYVPAKMCRLNIWLMSPSVVFDEVP-AQTHSVILTSGTLSPLHSLRAELGRSFGERLLPF 288
Query: 464 -----ENPHVITSKQIWAGIVPVG--PSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
E HVI ++ ++PVG P L D+ E+ +E+G T+V +A+ +P
Sbjct: 289 PQQALEANHVINPERQLR-VIPVGHSPRNKTLMCKKVCTDNDEFVEEIGRTVVALAKHIP 347
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVE-PRQSSLFPLAIEDY- 574
G+L+F SY L+ + +A W+ +W + + K +VE P ++ F A Y
Sbjct: 348 AGVLVFLSSYKLLQRAVAIWRKCE------VWADLERIKGVIVEEPEAAADFKAAKRRYE 401
Query: 575 ---------MAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKV 625
+ + ++ A+ AV RGK+SEG+ F DH R V+ G+P+ + DPK+
Sbjct: 402 DAVDGGPGGRGRGRGSAGGSAILLAVYRGKMSEGISFNDHYARGVLCVGIPYPNLGDPKI 461
Query: 626 RLKREYLDLQAQSQGGEYKE 645
K+ Y D ++ + E K+
Sbjct: 462 VAKKCYNDWKSLGRKPEAKD 481
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQ--ISLWIQPHI 706
+ LSG +WY Q+A RA NQA+GR IRH +DYG + DER K ++ W++
Sbjct: 655 ALLSGSNWYAQEAYRAQNQALGRCIRHVYDYGVVCLIDERIRAGEWKHVKFLAKWMRDLR 714
Query: 707 QCYSKFGDVVYTLTRFF 723
Y F VV T+ +FF
Sbjct: 715 GDYPSFEHVVGTMDQFF 731
>gi|154308671|ref|XP_001553671.1| hypothetical protein BC1G_07758 [Botryotinia fuckeliana B05.10]
Length = 724
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 174/711 (24%), Positives = 293/711 (41%), Gaps = 149/711 (20%)
Query: 122 KMVILGSREQLCIHREVSLLRG-SAQNNACRFLCKKGT--NRRCNH-----HSRVADYMK 173
K + LGSR+ LCI+ +V+ L +A N C L + T ++C H + + + +
Sbjct: 55 KHLTLGSRKNLCINPKVNKLNSVTAINERCAELQQSSTPKEQKCPHLPNKDNKSLVNTFR 114
Query: 174 NNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW 233
+ H DIED+ ++G+ CPY+ +R K +IV PY L+ R+ LG+
Sbjct: 115 D--HALATIRDIEDMGSLGKEISICPYYASRAAIKPAEIVTLPYPLLLQKSAREALGISL 172
Query: 234 KNSIL-------IFDEAHNLEGICADAASFDLSSGLLTACISE------AKNCIDISSTR 280
K ++ + D + G + L+ +L + KN I ++ T
Sbjct: 173 KGHVVIIDEAHNLMDAIAGIYGTEMELRELKLAKEMLGNYFRKFAKRLGGKNRIYVAQTI 232
Query: 281 RGQSSDETLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQET 340
R S ++ L+ LE + ++ K+L L+ Q
Sbjct: 233 RVVDS----------LVGYLVRMLEGSAIDGVVSQKDL------------LSGKGADQID 270
Query: 341 AYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILKII--------FRDKGTAHSAY 392
+KLI LQE KL A ++ES ++ ++I ++KG S
Sbjct: 271 LFKLI-------RYLQESKL-------ARKVESYTDHIRISQPQTSVSSSKNKGPPKSTP 316
Query: 393 YRVHVREADANAAD--------VLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGT 444
+ LK + TL + NP I ++IL GT
Sbjct: 317 ILHTLTSLLLALTHPTSEGQLFFLKHENDVTLKFQLLNPAIHFDSIVS-SARAVILAGGT 375
Query: 445 LSPMDSFAQELKLNFPLR----VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEY 500
+SP + L + P + HVI S ++A +V GP+GY ++ NR + E
Sbjct: 376 MSPFSDYTSILFPSVPAHKIKTLSCGHVIPSSNLFASVVSKGPTGYPFKWTFENRANTEM 435
Query: 501 KQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLT------TIWERICKH 554
ELG +VN+ +VP G+++FFPSY ++D +A + GN ++ +R+ +
Sbjct: 436 MDELGRVLVNVCTVVPGGVVVFFPSYRVLDTILARFAVVQQGNNNSTSKPKSLLQRLEEK 495
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKD--TSTSGAVFFAVCRGKVSEGLDFADHAGRAVVI 612
K V E ++ S +E+ + + + G + F+V GK+SEG++F+D GRAVVI
Sbjct: 496 KTVVREAKEES-----VEEILRRYGNAIAEGKGGLLFSVVGGKLSEGINFSDDLGRAVVI 550
Query: 613 TGMPFATMTDPKVRLKREYLDLQAQSQ-GGEY------KETKLSFLSG------------ 653
G+PF + R + +++ A ++ G+Y T+L G
Sbjct: 551 VGLPFPNARTAEWRRRLRFVEESAVARLSGDYLGSASSSLTRLGLKGGYVEKEKDEEVEN 610
Query: 654 ---------------------------------EDWYNQQASRAVNQAVGRVIRHRHDYG 680
+D++ RAVNQ+VGR IRHR D+
Sbjct: 611 GETGRSQNTEPQIQIPIPHEIQAQIAHKAKEEAKDFFENVCMRAVNQSVGRAIRHRGDWA 670
Query: 681 AIIFCDERFAHPSRKSQISLWIQPHIQCYSK----FGDVVYTLTRFFREER 727
I+ DERF + +++ WI+ ++ + FG VV L F R
Sbjct: 671 GILMVDERFRGEGVRGKLAGWIREGVKGVKEEDQGFGRVVGGLGAFVSGRR 721
>gi|410910536|ref|XP_003968746.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Takifugu rubripes]
Length = 760
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C +P IA++ F R + S+++TSGTLSP+D + + L +
Sbjct: 429 ANPVLHFSCMDPSIAIKPVFQRFQ--SVVITSGTLSPLDIYPKILDFRPVTMASFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G L+S + R+ + GN ++ ++ IVPDG++ FF SY M+
Sbjct: 487 RTCLCPLIIGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYVYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I K+K +E ++ +A+E Y ++ GA+ +
Sbjct: 547 NIVASWYEQG------ILENIQKNKLIFIETPDAAETSMALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q
Sbjct: 599 VARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDHFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG +IF D+R+A ++ ++ WIQ HI
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHI 701
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 138/284 (48%), Gaps = 52/284 (18%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++K+
Sbjct: 5 IDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQKAF- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +V++EL K Y K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVVEELRKLLEYHAKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSR----VA 169
+ L SR+ LCIH EVS LR G + C L + R HS V
Sbjct: 98 TGQSNNFLALALSSRKNLCIHPEVSALRFGKEVDGKCHSLT--ASYIRAQRHSDPNVPVC 155
Query: 170 DYMKNNPHLGDE-PI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
Y ++ +G + P+ +++DL + GR G CPY++ R +IV Y+YL+DP
Sbjct: 156 RYFEDFDAVGRQVPLPAGIYNLDDLKDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDP 215
Query: 224 WFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E K S+++FDEAHN++ +C D+ S +++ L C
Sbjct: 216 KIADLVSKELAKKSVVVFDEAHNIDNVCIDSMSVNITRRTLDRC 259
>gi|159152196|gb|ABW92606.1| CG4078-PA [Drosophila simulans]
Length = 235
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 118/196 (60%), Gaps = 9/196 (4%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSL-LRGSAQNNACR 151
+P ++Y SRTHSQL Q ++ELK + Y + V+LGSR+QLCIH EV L S + N C+
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMRELGNSNKTNMCK 95
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
T C+ RV + K++P L G +DIEDLV +G+ CPYF +REL
Sbjct: 96 LRVHSKT---CSFQMRV-ESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQA 151
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
DI F PYNYL+DP RK +E N+I+I DEAHN+E IC ++AS + S + I +
Sbjct: 152 DITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDV 211
Query: 271 KNCIDISSTRRGQSSD 286
+ + + ++ G+S D
Sbjct: 212 THIMQVFAS--GESQD 225
>gi|213511929|ref|NP_001133411.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
gi|209153902|gb|ACI33183.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
Length = 760
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 152/297 (51%), Gaps = 26/297 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C +P IA++ F R + S+I+TSGTLSP+D + + L P+ V + +
Sbjct: 429 ANPVLHFSCMDPSIAIKPVFERFQ--SVIITSGTLSPLDIYPRILDFR-PVTVASFTMTL 485
Query: 471 SKQ-IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
++ + +V G + S + R+ + GN ++ ++ IVPDG++ FF SY M
Sbjct: 486 ARTCLCPLVVGRGNDQVAMTSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFTSYTYM 545
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFF 589
+ +A W I E + ++K +E ++ +A+E Y ++ GA+
Sbjct: 546 ENIVASWYEQG------ILENVQRNKLIFIETPDAAETSMALEKYQEACENGR--GAILL 597
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
+V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 598 SVARGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------ 645
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG +IF D+R+A ++ ++ WIQ H+
Sbjct: 646 -IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHL 701
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 50/276 (18%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A+++
Sbjct: 5 IEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQREY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPK- 122
++ ++Y SRT ++ +V++EL K + K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVVEELRKLMEFYSKE 97
Query: 123 --------MVILGSREQLCIHREVSLLR-GSAQNNACRFL------CKKGTNRR---CNH 164
+ L SR+ LC+H EVS LR G + C L ++ +N C
Sbjct: 98 TGEKNNILALALSSRKNLCVHPEVSSLRFGKEVDGKCHSLTASYIRAQRQSNPSLPSCRF 157
Query: 165 HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
+ D M L +++DL + GR G CPY++ R +I+ Y+YL+DP
Sbjct: 158 YEEF-DAMGKQVPLPAGVYNLDDLKDFGRRKGWCPYYLARYSILHANIIVYSYHYLLDPK 216
Query: 225 FRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS 259
+ E K S+++FDEAHN++ +C D+ S +++
Sbjct: 217 IADLVSKELSKKSVVVFDEAHNIDNVCIDSMSVNIT 252
>gi|332158988|ref|YP_004424267.1| DNA repair helicase rad3 [Pyrococcus sp. NA2]
gi|331034451|gb|AEC52263.1| DNA repair helicase rad3 [Pyrococcus sp. NA2]
Length = 638
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 186/726 (25%), Positives = 314/726 (43%), Gaps = 143/726 (19%)
Query: 13 FPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP++ Q ++E V +S++ N ++E+PTG GKT+ +L L + SLG
Sbjct: 5 FPYKTLRPNQKEFIELVRESVRKGENIIIEAPTGFGKTISVLAGVLPYAISLGY------ 58
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSN--YRPKMVILGSR 129
++Y +RTH Q+ +VI+ELK R + SR
Sbjct: 59 ------------------------KVIYLARTHKQMDRVIEELKMIREIARVSGIEFRSR 94
Query: 130 EQLCIHREVSLLRGSAQNN-----ACRFLCKKG-------TNRRCNHHSRVADYMKNNPH 177
LC+H + L+ AQ+ C+ L K G + + + ++ +P
Sbjct: 95 RDLCLH---TYLKNFAQDAYTSMIVCKTLRKLGKCKFFENIKEKKDSVREIIEFFLESPS 151
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEW 233
E I+ L+ + CPY +TR++ + +++ A Y Y+I+PW R+ LG+++
Sbjct: 152 FPWEVIEYSSLLEL------CPYEVTRKVGEKANVIVASYLYMINPWIRQAFMESLGLDY 205
Query: 234 KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDN 293
+ I+IFDEAHN+ A S LS + I EA+ G+ + N
Sbjct: 206 SDLIVIFDEAHNIPDQAISALSDRLSIRTIERAIKEAEEY--------GEK-----DIAN 252
Query: 294 F--AILRALLL----KLEK-RIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLID 346
F LR L + KLE I EVP++ E+ +E T++ L D
Sbjct: 253 FLSIFLRGLEILYREKLENYEIQEVPLSPMEIFSHVASILGFE-------TRDILMVLND 305
Query: 347 IVEVAAELLQEDKLQNK---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADAN 403
+VE+ + ++ED+++ +S E + N L ++ R S Y + +E
Sbjct: 306 MVEI-GDAIREDRIERNLPPRSYIGRTGEFLLNWLSLMDR------SDYIHLFSKE---- 354
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRV 463
+G A L +P IA+ + +V S I SGTL+P+++F + + L+
Sbjct: 355 -----RGPA---LELVALDPSIALDFLN--DVHSAIFMSGTLTPLEAFRDIIGVQAKLK- 403
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
+ P ++ S+ IV V +++ R YK+ L + +I+P + +F
Sbjct: 404 KFPRIVKSEN---AIVLVARD---VSTRGEERTPALYKK-LAEYVFEAVKIIPKNVGVFT 456
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM-AKLK-DT 581
SY +++ ++ H I E I K+ +E R +S A D M A+ K +
Sbjct: 457 ASYEVLEGLLST---NVH---IKIEEEIG--KRVFIEKRDAS---SAENDAMVAEFKAEA 505
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
G V F V G+ SEG D++ VV+ G+P+A T P+V+ + Y + + +G
Sbjct: 506 KGRGGVLFGVMGGRNSEGQDYSGDEMNGVVLVGIPYAKPT-PRVQAQIRYYEKKFPGKGR 564
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
Y Y A R + QA GRV R + G+I+ D R + K + W
Sbjct: 565 YYG------------YLLPAHRKLAQAAGRVHRSEEERGSIVILDYRVLWNTVKRDLPDW 612
Query: 702 IQPHIQ 707
I IQ
Sbjct: 613 IVEAIQ 618
>gi|159152198|gb|ABW92607.1| CG4078-PA [Drosophila melanogaster]
Length = 234
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 9/204 (4%)
Query: 94 LPTILYTSRTHSQLRQVIQELKTSNY-RPKMVILGSREQLCIHREVSLLRG-SAQNNACR 151
+P ++Y SRTHSQL Q ++ELK + Y + V+LGSR+QLCIH EV +G S + N C+
Sbjct: 36 VPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCK 95
Query: 152 FLCKKGTNRRCNHHSRVADYMKNNPHL-GDEPIDIEDLVNIGRTFGPCPYFMTRELQKTV 210
T C+ RV + K++P L G +DIEDLV +G+ CPYF +REL
Sbjct: 96 LRVHSKT---CSFQMRV-ESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQA 151
Query: 211 DIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
DI F PYNYL+DP RK +E N+I+I DEAHN+E IC ++AS + S + I +
Sbjct: 152 DITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDV 211
Query: 271 KNCIDISSTRRGQSSDETLNPDNF 294
+ + + ++ G+S P +F
Sbjct: 212 THIMQVFAS--GESDMAGDEPKDF 233
>gi|443703659|gb|ELU01094.1| hypothetical protein CAPTEDRAFT_167887 [Capitella teleta]
Length = 786
Score = 149 bits (377), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 163/316 (51%), Gaps = 31/316 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ- 473
L + C + IA++ F R + S+I+TSGTLSP+D + + L P+ + + + ++Q
Sbjct: 459 LHFSCMDASIAIKPVFDRFQ--SVIITSGTLSPLDIYPKILDFR-PVTMSSYTMTLARQC 515
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
I IV G ++S + R+ + + GN +V++A +VPDG++ FF SY M+ +
Sbjct: 516 ILPLIVSRGNDQVTISSKFETREDPDVIRNYGNLLVDLAAVVPDGVVAFFTSYVYMETIV 575
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
A W + I +++ +HK +E + ++ LA+ ++ + GAV +V R
Sbjct: 576 AAWYDQG------IIDQVQRHKVLFIETQDAAETSLALANFQKACDNGR--GAVLLSVAR 627
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF-LS 652
GKVSEG+DF H GRAV++ G+P+ ++ + EYL + +F +
Sbjct: 628 GKVSEGVDFDHHYGRAVIMFGVPYVYTQSRILKARLEYL--------------RDNFNIR 673
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ---CY 709
D+ A R Q VGR +R + DYG +IF D+RF ++ ++ WIQ H++ C
Sbjct: 674 ENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFGRADKRQKLPRWIQEHLKDGVCN 733
Query: 710 SKFGDVVYTLTRFFRE 725
+ V RF R+
Sbjct: 734 LSTEECVQVCKRFLRQ 749
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 131/295 (44%), Gaps = 57/295 (19%)
Query: 8 GIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSF 66
G+ V FP++ Y Q YM+++ ++L + + LE P+GTGKT+ LL +A+ K
Sbjct: 33 GLLVYFPYDYIYPEQYAYMQELKRALDAQGHCALEMPSGTGKTVSLLSLIVAYMK----- 87
Query: 67 STLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------SNY 119
Q ++ ++ ++Y SRT +L +V++ELK
Sbjct: 88 --------------QRPLDVTK--------LIYCSRTVPELEKVVEELKNLIEYYERETG 125
Query: 120 RPKMVI---LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD------ 170
P ++ L SR+ LCIH E LRG C T + + D
Sbjct: 126 EPSTLVGLALSSRKNLCIHPE---LRGQRDGKEIDARCHAMTASHVRNRHQEDDSIPVCS 182
Query: 171 -YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
Y + H + P+ D++ L G G CPYFM R IV Y YL+DP
Sbjct: 183 YYEDYDAHGREVPLPPGIYDLDKLREYGTEKGWCPYFMARYAIMHSSIVVYSYYYLLDPK 242
Query: 225 FRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC---ISEAKNCID 275
+ E K S+++FDEAHN++ +C ++ S +S + C I + + CID
Sbjct: 243 IADLVSKELSKKSVVVFDEAHNIDSVCIESMSCVISRRTVDKCHTNIEKLQECID 297
>gi|320166669|gb|EFW43568.1| nucleotide excision repair protein [Capsaspora owczarzaki ATCC
30864]
Length = 747
Score = 149 bits (377), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 31/316 (9%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNF-PLRVENPHVITSK 472
L + C + +A++ F R + ++++TSGTLSP++ + + LNF P+ ++ + S+
Sbjct: 407 VLYFSCMDASLAIKPIFDRFQ--TVVITSGTLSPIEMYPK--ILNFQPVTAQSFTMTLSR 462
Query: 473 Q-IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ IV G ++S ++ RD + G+ +V+++ +VPDGL+ FFPSY M+
Sbjct: 463 NCVCPVIVTRGSDQVAVSSRFQVRDDPAVVRNYGSLLVDLSAVVPDGLVCFFPSYTYMES 522
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
+A W G LT + ++K +E + + +A+++Y ++ GAV +V
Sbjct: 523 IVAKWHE--QGVLTNLL----RNKLVFIETQDGAETSIALDNYQKACENGR--GAVLLSV 574
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
RGKVSEG+DF H GRAV++ G+P+ +R + +YL Q Q + G++ L+F
Sbjct: 575 ARGKVSEGIDFDHHYGRAVILFGIPYVYTESRILRARLDYLREQFQIREGDF----LTF- 629
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ---C 708
A R Q VGR IR + DYG +IF D+RFA +K ++ WIQ ++ C
Sbjct: 630 --------DALRHGAQCVGRAIRGKSDYGMMIFADKRFARLDKKGKLPKWIQQYMTDDLC 681
Query: 709 YSKFGDVVYTLTRFFR 724
+ V RF R
Sbjct: 682 NLSVDEAVQVAKRFLR 697
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 48/259 (18%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M ++ +S+ K + +LE P+GTGKT+ LL S +
Sbjct: 1 MLELKRSIDAKGHCVLEMPSGTGKTISLL----------------------------SLI 32
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELKT--------SNYRPKMVILG--SREQLCI 134
S Q + ++ ++Y SRT ++ +V+ E+ + R K + LG +R+ +CI
Sbjct: 33 ISHQMVNPQMGKLIYCSRTVPEIEKVLDEMTKLVAYIESETGQRLKFLGLGLSARKNMCI 92
Query: 135 HREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRV--ADYMKNNPHLGDEPI------DI 185
H EVS R G ++ CR L R ++S V + + G E + +
Sbjct: 93 HPEVSKERDGKLVDSKCRELTASWVRTRAENNSEVELCSFYEEFDRSGREALLPAGVYTL 152
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAH 244
++L G+ CPY++ R + +++ Y+YL+DP + E K S+++FDEAH
Sbjct: 153 DELRAFGQRQNWCPYYLARHMISFANVIVYSYHYLLDPKIANLVSKELAKESVVVFDEAH 212
Query: 245 NLEGICADAASFDLSSGLL 263
N++ +C ++ S +++ L
Sbjct: 213 NIDNVCIESMSVEITKRTL 231
>gi|440302531|gb|ELP94838.1| HELICc2 domain containing protein, partial [Entamoeba invadens IP1]
Length = 484
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 119/220 (54%), Gaps = 20/220 (9%)
Query: 505 GNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQS 564
G I I + P G L+FF SY +M++ W+ N + KHK +E ++
Sbjct: 10 GEAIFEILQKSPGGGLVFFSSYKIMEKIHKLWECRKTLN------ELRKHKTVFIEQKRR 63
Query: 565 SLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPK 624
F E+Y K + GAVF V RGK+SEG+DF D+ R V+I G+P+ + D
Sbjct: 64 KDFLRDFEEY----KKCANQGAVFLGVFRGKLSEGIDFGDNLARVVIIVGIPYPNLGDLN 119
Query: 625 VRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIF 684
V++K++Y + Q +G + G WY QA RAVNQAVGRVIRH++D+GAI+
Sbjct: 120 VKMKKQYNNAVVQQEG--------KGVDGNQWYAIQAMRAVNQAVGRVIRHKNDFGAIML 171
Query: 685 CDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFFR 724
D R+ P+ + +S WIQ IQ + ++ L +FF+
Sbjct: 172 LDMRYNRPNNRKMMSGWIQKEIQNGKEGWNL--ELEKFFK 209
>gi|239613258|gb|EEQ90245.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ER-3]
gi|327357445|gb|EGE86302.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis ATCC
18188]
Length = 851
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 165/339 (48%), Gaps = 31/339 (9%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL----RVEN---PHV 468
L + +P +E + ++IL GT+SPMD + + L FP R++ HV
Sbjct: 510 LKYMLLDPTNHFREIVE-DARAVILAGGTMSPMDDYVEHL---FPYLNADRLKTFSYGHV 565
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I + A V G + +Y R+ +LG TI + R++PDG+++FFPSY
Sbjct: 566 IPPDNLTAIPVSKGAFNTEFDFTYGKRNDENMIIDLGRTIAALCRVIPDGVVVFFPSYDY 625
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR-QSSLFPLAIEDYMAKLKDTSTSGAV 587
++Q + WK + + I + I K K E + +++ ++DY + + S GA+
Sbjct: 626 LNQVLVIWKKQAPNTRSNIIDSIEKSKVVFHESQDKTTNIDGLLQDYSSAINGGSRGGAL 685
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY---------------L 632
+V GK+SEG++F+D GR V++ G+PF + + K +Y L
Sbjct: 686 LLSVMGGKLSEGINFSDKLGRGVIVVGLPFPNIRSAVWQAKIQYVEHKAYESASPLSSSL 745
Query: 633 DLQAQSQGGEYKETKL-SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAH 691
D + QG + KL + +G +Y R VNQ +GR IRH+ DY AI+ D R+
Sbjct: 746 DQDRKGQGFSEESRKLKAKAAGRVFYENACMRTVNQCIGRAIRHQGDYAAILMMDRRYGS 805
Query: 692 PSRKSQISLWIQPHIQCYSKFGDVVYT---LTRFFREER 727
P +S++ WI+ ++ + V T ++ FFR +R
Sbjct: 806 PRIQSKLPNWIRQNLAAGTSEQPVERTIGDISGFFRRKR 844
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 39/199 (19%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP---------------------------KMVILGSR 129
+ Y SRTHSQL Q EL+ P K + LGSR
Sbjct: 168 VFYCSRTHSQLTQFAHELRRVKLPPSVPPEVDDHDATADSASHPDDTLEESMKHLSLGSR 227
Query: 130 EQLCIHREVSLLRGS-AQNNACRFLCKKGT--NRRCN------HHSRVADYMKNNPHLGD 180
+ LCI+ +V L S A N C + + T +RC + + V D+ H
Sbjct: 228 KTLCINPKVRALGNSTAINERCLEIQRPETLAEQRCQFVLNKENETLVNDFRD---HTLA 284
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
+ DIED+ IG G CPY+ +R + K +IV PY L+ R+ L + KN ++I
Sbjct: 285 KVRDIEDIGKIGSKIGVCPYYASRSIIKYSEIVTLPYPLLLQRSAREALNISLKNHVVII 344
Query: 241 DEAHNLEGICADAASFDLS 259
DEAHNL ++ S LS
Sbjct: 345 DEAHNLMDAISNIHSMSLS 363
>gi|395538820|ref|XP_003771372.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Sarcophilus harrisii]
Length = 901
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 159/323 (49%), Gaps = 30/323 (9%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
+L + NP + + + E ++I+ GT+ P+ F ++L + E HV
Sbjct: 594 SLRFLLLNPSVHFAQVVK-ECRAMIIAGGTMQPVADFREQLLECAGVGTERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ GPS L Y+ R+ + E+G + N+ +VP GL+ FF SY
Sbjct: 653 IPPDNILPIVLCSGPSNQQLEFIYQKRELPQMMDEVGRILCNLCNVVPGGLVCFFSSYDY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ + A WK + G LT R+ KK EP +++ + +Y +K S
Sbjct: 713 LHKIHAHWKQS--GLLT----RLAVKKKIFQEPNRANQVEQVLTEYSKCIKRCSQVKGVM 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D GR VV+ GMP+ + +++ K YLD
Sbjct: 767 TGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSLELQEKMAYLD---------- 816
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
L G+ +AVNQ++GR IRHR D+ +I+ D+R++ PS +++ WI+
Sbjct: 817 --QTLPNNPGKSLMENLCMKAVNQSIGRAIRHRQDFASILLLDQRYSRPSILAKLPGWIR 874
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG TL +F RE+
Sbjct: 875 DQVEIKTAFGPAFATLRKFHREK 897
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q ++E++ S + ++V LGSR+ LC++ EV L GSA N+ C
Sbjct: 227 IYYCSRTHSQLTQFVREVQKSPFGKETRLVSLGSRQNLCVNEEVKRL-GSATLINDRCLE 285
Query: 153 LCK-----------KGTNRRCNHHSRVADY-MKNNPHLGDEPI----DIEDLVNIGRTFG 196
+ K K R+ H+ Y + L DE + DIE LV +G+
Sbjct: 286 MQKSKHEKKNKEDEKAKKRKTETHTSCPFYNYEQMQFLRDEVLMEVKDIEQLVVLGKETH 345
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
CPY+ +R + +V PY L+ R G++ + ++I DEAHNL
Sbjct: 346 ACPYYGSRFAIPSAQLVVLPYQMLLHAATRHAAGIKLQGQVVIIDEAHNL 395
Score = 47.0 bits (110), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 9 IDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
I FP+ Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 10 IHFPFPYTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 60
>gi|261188545|ref|XP_002620687.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis SLH14081]
gi|239593171|gb|EEQ75752.1| ATP-dependent RNA helicase chl1 [Ajellomyces dermatitidis SLH14081]
Length = 851
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 165/339 (48%), Gaps = 31/339 (9%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPL----RVEN---PHV 468
L + +P +E + ++IL GT+SPMD + + L FP R++ HV
Sbjct: 510 LKYMLLDPTNHFREIVE-DARAVILAGGTMSPMDDYVEHL---FPYLNADRLKTFSYGHV 565
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I + A V G + +Y R+ +LG TI + R++PDG+++FFPSY
Sbjct: 566 IPPDNLTAIPVSKGAFNTEFDFTYGKRNDENMIIDLGRTIAALCRVIPDGVVVFFPSYDY 625
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPR-QSSLFPLAIEDYMAKLKDTSTSGAV 587
++Q + WK + + I + I K K E + +++ ++DY + + S GA+
Sbjct: 626 LNQVLVIWKKQAPNTRSNIIDSIEKSKVVFHESQDKTTNIDGLLQDYSSAINGGSRGGAL 685
Query: 588 FFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREY---------------L 632
+V GK+SEG++F+D GR V++ G+PF + + K +Y L
Sbjct: 686 LLSVMGGKLSEGINFSDKLGRGVIVVGLPFPNIRSAVWQAKIQYVEHKAYESASPLSSSL 745
Query: 633 DLQAQSQGGEYKETKL-SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAH 691
D + QG + KL + +G +Y R VNQ +GR IRH+ DY AI+ D R+
Sbjct: 746 DQDRKGQGFSEESRKLKAKAAGRVFYENACMRTVNQCIGRAIRHQGDYAAILMMDRRYGS 805
Query: 692 PSRKSQISLWIQPHIQCYSKFGDVVYT---LTRFFREER 727
P +S++ WI+ ++ + V T ++ FFR +R
Sbjct: 806 PRIQSKLPNWIRQNLAAGTSEQPVERTIGDISGFFRRKR 844
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 39/199 (19%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP---------------------------KMVILGSR 129
+ Y SRTHSQL Q EL+ P K + LGSR
Sbjct: 168 VFYCSRTHSQLTQFAHELRRVKLPPSVPPEVDDHDATADSASHPDDTLEESMKHLSLGSR 227
Query: 130 EQLCIHREVSLLRGS-AQNNACRFLCKKGT--NRRCN------HHSRVADYMKNNPHLGD 180
+ LCI+ +V L S A N C + + T +RC + + V D+ H
Sbjct: 228 KTLCINPKVRALGNSTAINERCLEIQRPETLAEQRCQFVLNKENETLVNDFRD---HTLA 284
Query: 181 EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIF 240
+ DIED+ IG G CPY+ +R + K +IV PY L+ R+ L + KN ++I
Sbjct: 285 KVRDIEDIGKIGSKIGVCPYYASRSIIKYSEIVTLPYPLLLQRSAREALNISLKNHVVII 344
Query: 241 DEAHNLEGICADAASFDLS 259
DEAHNL ++ S LS
Sbjct: 345 DEAHNLMDAISNIHSMSLS 363
>gi|449547579|gb|EMD38547.1| hypothetical protein CERSUDRAFT_113726 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 159/307 (51%), Gaps = 26/307 (8%)
Query: 420 CFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGI 478
C +P IA++ F R ++++TSGT+SP+D + + L+ ++ +T +
Sbjct: 441 CLDPAIAIKPVFERF--STVVITSGTISPLDMYPKMLQFTPVVQETYSMTLTRNSFLPLV 498
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
+ G ++S + R+ + G+ +V ++IVPDG++ FFPSY M+ +A W +
Sbjct: 499 ITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGIVAFFPSYLYMESIVAAWND 558
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
G L +W KHK VE ++ +A+E+Y + GAV +V RGKVSE
Sbjct: 559 M--GILNEVW----KHKLIFVETPDANETSIALENYRRACDN--GRGAVLLSVARGKVSE 610
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G+DF + GRAV++ G+P+ ++ + EYL + + E+ L F
Sbjct: 611 GIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEF----LGF-------- 658
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI-QCYSKFG-DVV 716
A R Q VGRV+R + D+G ++F D+RFA +++++ WI +I + S D+
Sbjct: 659 -DAMRTAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMA 717
Query: 717 YTLTRFF 723
TL++ F
Sbjct: 718 LTLSKLF 724
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 132/292 (45%), Gaps = 64/292 (21%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP++ Y Q YM + ++L + +LE P+GTGKT+ LL ++++
Sbjct: 3 FHIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ-- 60
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRP 121
Q N + ++Y SRT ++ + + ELK +YR
Sbjct: 61 ------------------QFYPNKRK--------LIYCSRTVPEIEKALAELKRLMDYRM 94
Query: 122 KMVI---------------LGSREQLCIHREVSL-LRGSAQNNACRFL-----CKKGTN- 159
L SR+ LC+H EVS +G + CR L C+KG
Sbjct: 95 TCAETEEEKAKEQNFYGLGLTSRKNLCLHPEVSKEKKGRVVDARCRDLTNSAVCEKGRQN 154
Query: 160 ----RRCNHHSRVADYMKNN---PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDI 212
C+ H + N P + + D++ GR CPYF+ R + VD+
Sbjct: 155 PGSVELCDWHENLGQMEPGNLIPPGIWT----LADVLQYGRDKRVCPYFLVRRMMPFVDV 210
Query: 213 VFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
+ ++YL+DP + + E K++I++FDEAHN++ +C ++ S DL+ +L
Sbjct: 211 IIYSFHYLLDPKVAEQVSREVSKDAIVVFDEAHNIDNVCIESLSIDLTRPML 262
>gi|320165089|gb|EFW41988.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 950
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 176/375 (46%), Gaps = 67/375 (17%)
Query: 401 DANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGS---IILTSGTLSPMDSFAQEL-- 455
DA+A D K TL + NPG+ ++ VGS +IL GT+ P D+FA +L
Sbjct: 589 DASAVDARKS----TLRFVMLNPGVHFRDV----VGSARAVILAGGTMQPTDAFANQLLA 640
Query: 456 -----KLNFPLRVENP----------------------------HVITSKQIWAGIVPVG 482
L P+ + H+I + + A + G
Sbjct: 641 PPSHPDLLVPVASASAASAQPFASVAAAPTSTSSTPETQVFSCGHIIPVENLQAVALAFG 700
Query: 483 PSGYL-LNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSH 541
P+G + + S+R R ELG + +I VP+G++ FF SY M + + W+ T
Sbjct: 701 PTGEVKFDFSFRFRHDTRVMDELGRALCDIVAWVPEGVVCFFQSYDYMAKVLDRWRQTE- 759
Query: 542 GNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLD 601
+ +++ K+ EPR + + +Y ++ + +GA+ F V GK+SEG++
Sbjct: 760 -----VLQQVQLKKRVFQEPRVAGNVDSVLREYSECIR--AGNGAILFCVVGGKLSEGIN 812
Query: 602 FADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG-GEYKETKL--SF---LSGED 655
F+D GR VV+ G+PFA M ++ K YL+ QA+ + K KL SF +GE+
Sbjct: 813 FSDGLGRCVVMVGLPFANMYSTELNEKMRYLNEQAKVRALASSKTNKLPPSFDETAAGEE 872
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS--KF- 712
+Y RAVNQ++GR IRH DY I+ D RF P ++++ WI S KF
Sbjct: 873 FYLNLCMRAVNQSIGRAIRHSKDYATILLLDHRFLQPHIQAKLPRWIAESASFTSTEKFR 932
Query: 713 ---GDVVYTLTRFFR 724
G V+ +L R +R
Sbjct: 933 VAAGRVLSSLIRQYR 947
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 16/222 (7%)
Query: 91 DSKLP---TILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSA 145
D ++P I Y SRTHSQL Q +QE++ S + K+V+LGSR+ LC++ +V L
Sbjct: 225 DEEVPDVAKIYYCSRTHSQLNQFVQEVRKSPFGETTKVVVLGSRKNLCVNDDVRKLEAVE 284
Query: 146 Q-NNACRFLCKKGTNRRCNHHSRVADYMKNNP--HLGDEPI----DIEDLVNIGRTFGPC 198
+ N C L K + + ++ Y+ N+ L D + DIE+LVN G+ G C
Sbjct: 285 RINERCDDLRKNASKSK---EAKGCPYLTNDSVSTLRDSILVHTTDIEELVNRGKKMGAC 341
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDL 258
Y+ +R + +V PY L+ R+ LG+ N ++I DEAHN+ D S +
Sbjct: 342 AYYASRRAIRAAHLVALPYQMLLHHSTREALGINLSNQVVIVDEAHNVMETLNDIYSVTI 401
Query: 259 SSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRAL 300
+ ++ A S+ + + +TR S+ +N F ++RA+
Sbjct: 402 TLAVIRAAQSQLEQYAEKYNTRLSLSNLRFVNQLLF-VMRAM 442
>gi|426372116|ref|XP_004052976.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Gorilla gorilla gorilla]
Length = 1016
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 704 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 762
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E+G + N+ +VP G++ FFPSY
Sbjct: 763 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 822
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ S + R+ KK EP+ + + Y ++
Sbjct: 823 LRQVHAHWEKGS------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQV 876
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 877 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 936
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 937 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 989
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG V + +F RE+
Sbjct: 990 ARVEVKATFGPAVAAVQKFHREK 1012
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 339 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 397
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 398 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 457
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 458 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 517
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 518 VEVSGSQLCQAHSQLLQYMEQYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 569
Query: 316 KE 317
K+
Sbjct: 570 KQ 571
>gi|326912321|ref|XP_003202502.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Meleagris gallopavo]
Length = 896
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 161/322 (50%), Gaps = 28/322 (8%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF----PLRVEN---PH 467
+L + NP + + + E ++I+ GT+ P+ F ++L L+ P R+ H
Sbjct: 587 SLKFLLLNPAVHFAKVVK-ECRAVIIAGGTMQPVADFREQL-LSCAGVDPARIMEFSCGH 644
Query: 468 VITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYY 527
VI + I ++ GPS L +Y+ RD + E G + N+ +VP G++ FFPSY
Sbjct: 645 VIPPENILPIVLCSGPSNQQLEFTYQTRDLPQMMDETGRILCNLCNVVPGGVVCFFPSYD 704
Query: 528 LMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS----- 582
Q A W+ T G LT R+ KK EP++++ + +Y +K S
Sbjct: 705 YEKQVYAHWEKT--GLLT----RLATKKKIFQEPKKANQVEQVLVEYAKCIKRCSQAGGQ 758
Query: 583 TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGE 642
+GA+ +V GK+SEG++F+D GR V++ GMP+ + P+++ K +LD + +
Sbjct: 759 MTGALLLSVVGGKMSEGINFSDDLGRCVIMVGMPYPNIKSPELQEKMTWLD-KTMPRAAS 817
Query: 643 YKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+K+ +AVNQ++GR IRH+ D+ +I+ D R++ P+ +++ WI
Sbjct: 818 QAPSKV-------LIENLCMKAVNQSIGRAIRHQKDFASILLLDHRYSRPAILNKLPQWI 870
Query: 703 QPHIQCYSKFGDVVYTLTRFFR 724
+ Q FG L +F R
Sbjct: 871 RERTQVKPAFGSAFAELRKFHR 892
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 28/231 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + ++V LGSR+ LC++ EV L G+ Q N+ C
Sbjct: 218 IYYCSRTHSQLSQFVHEVQKSPFGKDTRLVSLGSRQNLCVNEEVRRL-GALQLINDRCTE 276
Query: 153 LCK-----------KGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGRTFGP 197
+ K +G RR + + L DE + DIE LV +G+
Sbjct: 277 MQKNKHEKKSDAEVEGKKRRVSRTVCPFYSYEQMQFLRDEVLVEVKDIEQLVTLGKETKA 336
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
CPY+ +R +V PY L+ R G+ K+ ++I DEAHNL S +
Sbjct: 337 CPYYGSRYAIAAAQLVVLPYQMLLHEATRNAAGIILKDQVVIIDEAHNLIDTITCIHSAE 396
Query: 258 LSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRI 308
+S L S+ ++ S R L N ++ +L LE+ +
Sbjct: 397 VSGSQLCCAHSQLLQYMERYSKR--------LKAKNLMYIKQILYLLERFV 439
>gi|410348520|gb|JAA40864.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348522|gb|JAA40865.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348524|gb|JAA40866.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E+ HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAEHVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E+G + N+ +VP G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMTYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 827 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAMQKFHREK 902
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYMEQYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|332839865|ref|XP_520821.3| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4 [Pan
troglodytes]
Length = 880
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 568 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 626
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E+G + N+ +VP G++ FFPSY
Sbjct: 627 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 686
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 687 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQV 740
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 741 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 800
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 801 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 853
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 854 ARVEVKATFGPAIAAMQKFHREK 876
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 203 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 261
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 262 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 321
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 322 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 381
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 382 VEVSGSQLCQAHSQLLQYMEQYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 433
Query: 316 KE 317
K+
Sbjct: 434 KQ 435
>gi|403309188|ref|XP_003945007.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Saimiri boliviensis boliviensis]
Length = 903
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNF---PLRVEN---PHV 468
+L + NP + + + E ++++ GT+ P+ F Q+L P RV HV
Sbjct: 591 SLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEPERVVEFSCGHV 649
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E G + N+ +VP G++ FFPSY
Sbjct: 650 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEAGRILCNLCGVVPGGVVCFFPSYEY 709
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q W+ + +R+ KK EP+ + + Y ++
Sbjct: 710 LRQVHTHWEKGG------LLDRLAARKKIFQEPKSTHQVEQVLLAYSRCIQGCGQERGRV 763
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + P+++ K YLD G+
Sbjct: 764 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSPELQEKMAYLDQTLPRAPGQA 823
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 824 P-------PGKALVENLCMKAVNQSIGRAIRHQRDFASIVLLDQRYARPPVLAKLPAWIR 876
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 877 ARVEVKAAFGPAIAAVQKFHREK 899
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNAC-- 150
+ Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 VYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQSLCVNEDVKSL-GSVQLINDRCVD 287
Query: 151 ----RFLCKKGTN----RRCNHHSRVADYMKNNPH---LGDEPI----DIEDLVNIGRTF 195
R KKG +R + A N+ L DE + DIE L+ +G+
Sbjct: 288 MQRSRHGKKKGAEEEKPKRRRQEKQAACPFYNHEQMDLLRDEALAEVKDIEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ RK G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRKAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYMERYRKR--------LKAKNLMYLKQILYLLEKFVAMLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ GI FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGGIHFPFPFTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|225685122|gb|EEH23406.1| CHL1 helicase [Paracoccidioides brasiliensis Pb03]
Length = 844
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 161/312 (51%), Gaps = 19/312 (6%)
Query: 437 SIILTSGTLSPMDSFAQELKLNFP------LRVEN-PHVITSKQIWAGIVPVGPSGYLLN 489
++IL GT+SPM+ +A L FP LR + HVI S + A V G +
Sbjct: 527 AVILAGGTMSPMEDYADHL---FPYLSPERLRTYSYGHVIPSDNLKAMPVTKGAFNTEFD 583
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
+Y R+ LG TI + R++PDG+++FFPSY ++Q + WK + ++ +
Sbjct: 584 FTYAKRNDESLIMGLGRTIAALCRVIPDGVVVFFPSYDYLNQVLTIWKKLLPNSQLSVLD 643
Query: 550 RICKHKKPVVEPR-QSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGR 608
I K K E + +++ ++ Y + S GA+ +V GK+SEG++F+D GR
Sbjct: 644 SIQKSKVLFHESQDKATNTDELLQGYSNAINAGSGGGALLLSVMGGKLSEGINFSDRLGR 703
Query: 609 AVVITGMPFATMTDPKVRLKREYLDLQA----QSQGGEYKETKLSF-LSGEDWYNQQASR 663
V++ G+PF + + K ++++ + QG + KL+ +G ++Y R
Sbjct: 704 GVIVVGLPFPNLRSAVWQAKIQHVEHKTYEREDGQGMSEESRKLTAKAAGREFYENSCMR 763
Query: 664 AVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYT---LT 720
VNQ +GR IRH++DY AII D R+ P ++++ WI+ ++ + + T ++
Sbjct: 764 TVNQCIGRAIRHQNDYAAIIMMDRRYGTPRIQNKLPNWIRQNLVAAASEQPIERTIGDIS 823
Query: 721 RFFREERICGST 732
FFR++R +T
Sbjct: 824 AFFRKKRAVDTT 835
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 54 CATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQE 113
A + KS G FS + ++ G N ++++ + Y SRTHSQL Q E
Sbjct: 122 VAASSMTKSDGIFSVDTLALLEKLKGGPVDTNVDIEQENEV-QVFYCSRTHSQLTQFAHE 180
Query: 114 LKTSNYRP---------------------------KMVILGSREQLCIHREVSLLRG-SA 145
L+ N P K + LGSR LCI+ +V L +A
Sbjct: 181 LRRVNLPPSIPPEVDDDKAAADAVSSGVDSLGETLKHLSLGSRNTLCINPKVRALGNPTA 240
Query: 146 QNNACRFLCKKGT--NRRCN------HHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGP 197
N C + + T +C+ + V D+ H + +DIED+ IG G
Sbjct: 241 INERCLEIQRPETPAEHKCSFVPNKENEVLVNDFRD---HTLAKVLDIEDIGKIGSKIGV 297
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
CPY+ R + K +I+ PY L+ R+ L + K+ ++I DEAHNL ++ S
Sbjct: 298 CPYYAARSIVKYSEIITLPYPLLLQRSAREALNISLKHHVVIIDEAHNLMDAISNIHSVS 357
Query: 258 LS 259
+S
Sbjct: 358 VS 359
>gi|57640719|ref|YP_183197.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus
kodakarensis KOD1]
gi|57159043|dbj|BAD84973.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus
kodakarensis KOD1]
Length = 637
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 181/724 (25%), Positives = 304/724 (41%), Gaps = 147/724 (20%)
Query: 13 FPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+E Q ++E + ++++N NA++E+PTG GKT+ +L L + K G
Sbjct: 5 FPYENLRPNQREFIELIGEAVKNGENAIVEAPTGFGKTISVLAGVLPFAKEYGY------ 58
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSR 129
+LY +RTH Q+ +VI+ELK + + + V L SR
Sbjct: 59 ------------------------KVLYLARTHRQMDRVIEELKAIHRKKPVSGVELRSR 94
Query: 130 EQLCIHREVSLLRGSAQNN--ACRFLCKKGTNRRCNHHSRVADYMKNNP----HLGDEPI 183
++LC+H + A N C+ L K G +C + EP
Sbjct: 95 KELCLHTYLKQFTTDAYNAMVVCKNLKKLG---KCPFYENEKKKKAEFEEVIRFFLTEPS 151
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK----GLGVEWKNSILI 239
+++N T CPY +T+ + + D++ A Y Y + P R+ LGV++ + I+I
Sbjct: 152 HPAEILNYAETLELCPYDLTKRIAEKADVIVASYLYALSPSIRESLISSLGVDYSDLIVI 211
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRA 299
FDEAHNL A S LS + I EA E N +IL
Sbjct: 212 FDEAHNLPDQAISALSDRLSIHTINRAIKEADEY----------REHEIAN--FLSILGK 259
Query: 300 LLLKL------EKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAE 353
L KL E+ + E P+ EL FT ++ E+L I + K ++ + +
Sbjct: 260 GLEKLYSEKLAERDVEEAPVQP-ELVFT----HVIEILG---INERWLVKTLNEMVSVGD 311
Query: 354 LLQEDKLQNKK--STTACRI-ESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKG 410
++ED+++ K + R+ E + L +I RD Y + RE KG
Sbjct: 312 AIREDRIEKGKPPRSYVGRVGEFLLLWLSLIGRDD------YLFLMTRE---------KG 356
Query: 411 KASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL------NFPLRV- 463
+L +P A+ +V S I SGTL+P+++F + + FP V
Sbjct: 357 M---SLELVALDPSRALSFIK--DVQSAIFMSGTLTPLEAFRDVMGIENARMKKFPRMVK 411
Query: 464 -ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIF 522
EN V+ +K + S+ + S++ +++ + IV +++P + +F
Sbjct: 412 RENAQVLVAKDV---------------STRGDERSLQAYRKMVDYIVEAVKLIPKNVGVF 456
Query: 523 FPSYYLMDQCIACWKNTSHGNLTTIWE---RICKHKKPVVEPRQSSLFPLAIEDYMAKLK 579
SY ++ ++ NL E R ++ V R++ L I + A K
Sbjct: 457 TASYEVLQGLLSA-------NLDVKLEETGRAVFIEQQGVSSRENDLM---IAQFKAHAK 506
Query: 580 DTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
+GAV V G+ SEG D++ VV+ G+P+A T P+V+ + Y + + +
Sbjct: 507 G---NGAVLLGVMGGRNSEGQDYSGDEMNGVVLVGIPYARPT-PRVQAQIRYFEKKFPGK 562
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
G Y Y A R + QA GRV R + G+I+ D R S + +
Sbjct: 563 GRYYG------------YYLPAHRKLVQAAGRVHRSAEEKGSIVILDYRVLWRSIRKDLP 610
Query: 700 LWIQ 703
W++
Sbjct: 611 DWMK 614
>gi|332839861|ref|XP_003313865.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1 [Pan
troglodytes]
gi|410258634|gb|JAA17284.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410301530|gb|JAA29365.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E+G + N+ +VP G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 827 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAMQKFHREK 902
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYMEQYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|409095652|ref|ZP_11215676.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus zilligii
AN1]
Length = 636
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 178/727 (24%), Positives = 302/727 (41%), Gaps = 155/727 (21%)
Query: 13 FPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+E Q ++E V ++++ N ++E+PTG GKT+ +L L + K G
Sbjct: 4 FPYETLRPHQREFIELVNEAVRRGSNLIIEAPTGFGKTISVLAGVLPYAKEAGY------ 57
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSR 129
+LY +RTH Q+ +VI+ELK N + + V L SR
Sbjct: 58 ------------------------KVLYLARTHRQMDRVIEELKEINKKTPVSGVELRSR 93
Query: 130 EQLCIHREVSLLRGSAQNN--ACRFLCKKGTNRRCNHHSR----------VADYMKNNPH 177
++LC+H + A C+ L K G +C + VA + + P
Sbjct: 94 KELCLHNYLVEYTSDAYTAMVVCKNLKKSG---KCQFYENEKKKREEFEEVAKFFLSGPA 150
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK----GLGVEW 233
P++I D T CPY +TR++ + D++ A Y Y+I P R+ GLG+ +
Sbjct: 151 ---HPVEILDY---AETLELCPYDLTRKVAEKADVIVASYLYMISPGIREAFLEGLGLTY 204
Query: 234 KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID------ISSTRRGQSSDE 287
+ I+IFDEAHNL A S +S + I EA+ + +S +G E
Sbjct: 205 SDLIVIFDEAHNLPDQAISALSDSISIHTVNRAIKEAEEYREHEIANFLSIFGKGL---E 261
Query: 288 TLNPDNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDI 347
L + F+ ++ + EVP++ + + F P + L I K ++
Sbjct: 262 LLYSEKFS---------DREVTEVPLSPESI-FAHP-------MNVLGIDARRLIKTLNG 304
Query: 348 VEVAAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADV 407
+ + ++ED+++ K I + L + F G Y + RE
Sbjct: 305 MVTVGDSIREDRIE-KNQPPRSYIGRVGEFLLLWFSLIG--RDDYLFLMGRE-------- 353
Query: 408 LKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL------NFPL 461
KG +L +P A+ F R +V S I SGTL+P+++F + + FP
Sbjct: 354 -KG---LSLELVALDPSKALT-FVR-DVKSAIFMSGTLTPLEAFRDVMGIENSMLKKFPR 407
Query: 462 RV--ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGL 519
V EN V+ ++ + S+ S++ + + + IV +I+P +
Sbjct: 408 MVKRENALVLVARDV---------------STRGEERSLQVYRRMVDYIVEAVKIIPKNV 452
Query: 520 LIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKH---KKPVVEPRQSSLFPLAIEDYMA 576
+F SY ++ ++ NL E K +K +++ L +A
Sbjct: 453 GVFTASYEVLQGLLSA-------NLQVKLEETGKAVFIEKQGASSKENDLL-------VA 498
Query: 577 KLKDTS-TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQ 635
+ K S T+GAV V G+ SEG D++ VV+ G+P+A T P+ + Y + +
Sbjct: 499 QFKAHSKTNGAVLLGVMGGRNSEGQDYSGDEMNGVVLVGLPYARPT-PRTEAQVRYFEAK 557
Query: 636 AQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRK 695
+G Y Y A R + QA GRV R + G+II D R + +
Sbjct: 558 FPGKGRYYG------------YYLPAHRKLVQAAGRVHRSAEERGSIIILDYRALWENVR 605
Query: 696 SQISLWI 702
+ W+
Sbjct: 606 KDLPDWL 612
>gi|71000721|ref|XP_755042.1| DNA helicase [Aspergillus fumigatus Af293]
gi|74673836|sp|Q4WWE9.1|CHL1_ASPFU RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|66852679|gb|EAL93004.1| DNA helicase, putative [Aspergillus fumigatus Af293]
Length = 782
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 153/297 (51%), Gaps = 13/297 (4%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-KLNFPLRVEN---PHVITS 471
L + +P +E + ++IL GT+SPM + L P R++ HVI
Sbjct: 461 LRYMLLDPTNQFREIVE-DARAVILAGGTMSPMSDYRNHLFSYIAPSRLDTFSYGHVIPP 519
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ + A + G G + +Y +RDS + +LG T+ + + +PDG++ FFPSY + +
Sbjct: 520 ENLIAHTLVNGVLGSEFDFTYDSRDSEKMILDLGRTVATLCQAIPDGVVAFFPSYDYLSR 579
Query: 532 CIACWKNTSHGNL-TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVF 588
+A W+ G TI I + K + E R + P +D + + T S GA+
Sbjct: 580 IVAIWRKPLEGEKGETILSLIEREKSILYEGR--DMGP-KTDDLLQEYTRTIDSGQGALL 636
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QSQGGEYKET 646
+V GK+SEG++F+D GR V+I G+PF + + K +Y++ + S G E
Sbjct: 637 LSVVGGKLSEGINFSDKLGRGVLIIGLPFPNIRSAVWQAKIQYVEQKTYNSSSGSEKDRQ 696
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
++ +G+D+Y RAVNQ +GR IRHR+DY AI+ D R+ + + ++ WI+
Sbjct: 697 SIAKAAGKDFYENACMRAVNQCIGRAIRHRNDYAAIVMIDRRYEKANIQGKLPAWIK 753
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 87/189 (46%), Gaps = 35/189 (18%)
Query: 97 ILYTSRTHSQLRQVIQELK-------------TSNY-------RPKMVILGSREQLCIHR 136
I Y SRTHSQL Q EL+ TS+ R K + LGSR+ LCI+
Sbjct: 122 IFYCSRTHSQLSQFSSELRRVKMPSSMPAELSTSDANTDEVQERVKHLTLGSRKNLCINP 181
Query: 137 EV-SLLRGSAQNNACRFLCKKG--TNRRCNHHSRVAD---YMKNNPHLGDEPIDIEDLVN 190
+V SL +A N C L + G +RC + D ++ H DIED+
Sbjct: 182 KVMSLGNAAAINERCLELQQPGIAAEKRCPYLPSKEDEGQILQFRDHTLATIKDIEDMGK 241
Query: 191 IGRTFGPCPYFMTRE--------LQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
+G+ G CPY+ +R L K IV PY L+ R L + KN ++I DE
Sbjct: 242 LGKRMGICPYYASRSVLKHSENVLLKAQKIVTLPYPLLLQRSARDALDLSIKNHVVIIDE 301
Query: 243 AHNL-EGIC 250
AHNL + IC
Sbjct: 302 AHNLMDAIC 310
>gi|159128055|gb|EDP53170.1| DNA helicase, putative [Aspergillus fumigatus A1163]
Length = 782
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 153/297 (51%), Gaps = 13/297 (4%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL-KLNFPLRVEN---PHVITS 471
L + +P +E + ++IL GT+SPM + L P R++ HVI
Sbjct: 461 LRYMLLDPTNQFREIVE-DARAVILAGGTMSPMSDYRNHLFSYIAPSRLDTFSYGHVIPP 519
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ + A + G G + +Y +RDS + +LG T+ + + +PDG++ FFPSY + +
Sbjct: 520 ENLIAHTLVNGVLGSEFDFTYDSRDSEKMILDLGRTVATLCQAIPDGVVAFFPSYDYLSR 579
Query: 532 CIACWKNTSHGNL-TTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--STSGAVF 588
+A W+ G TI I + K + E R + P +D + + T S GA+
Sbjct: 580 IVAIWRKPLEGEKGETILSLIEREKSILYEGR--DMGP-KTDDLLQEYTRTIDSGQGALL 636
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQA--QSQGGEYKET 646
+V GK+SEG++F+D GR V+I G+PF + + K +Y++ + S G E
Sbjct: 637 LSVVGGKLSEGINFSDKLGRGVLIIGLPFPNIRSAVWQAKIQYVEQKTYNSSSGSEKDRQ 696
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
++ +G+D+Y RAVNQ +GR IRHR+DY AI+ D R+ + + ++ WI+
Sbjct: 697 SIAKAAGKDFYENACMRAVNQCIGRAIRHRNDYAAIVMIDRRYEKANIQGKLPAWIK 753
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 87/189 (46%), Gaps = 35/189 (18%)
Query: 97 ILYTSRTHSQLRQVIQELK-------------TSNY-------RPKMVILGSREQLCIHR 136
I Y SRTHSQL Q EL+ TS+ R K + LGSR+ LCI+
Sbjct: 122 IFYCSRTHSQLSQFSSELRRVKMPSSMPAELSTSDANTDDVQERVKHLTLGSRKNLCINP 181
Query: 137 EV-SLLRGSAQNNACRFLCKKG--TNRRCNHHSRVAD---YMKNNPHLGDEPIDIEDLVN 190
+V SL +A N C L + G +RC + D ++ H DIED+
Sbjct: 182 KVMSLGNAAAINERCLELQQPGIAAEKRCPYLPSKEDEGQILQFRDHTLATIKDIEDMGK 241
Query: 191 IGRTFGPCPYFMTRE--------LQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDE 242
+G+ G CPY+ +R L K IV PY L+ R L + KN ++I DE
Sbjct: 242 LGKRMGICPYYASRSVLKHSENVLLKAQKIVTLPYPLLLQRSARDALDLSIKNHVVIIDE 301
Query: 243 AHNL-EGIC 250
AHNL + IC
Sbjct: 302 AHNLMDAIC 310
>gi|1666893|gb|AAB18749.1| CHL1 potential helicase [Homo sapiens]
Length = 906
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E+G + N+ +VP G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 827 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAVQKFHREK 902
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + D+E L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYVERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|422296028|gb|EKU23327.1| DNA excision repair protein ERCC-2, partial [Nannochloropsis
gaditana CCMP526]
Length = 937
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 158/320 (49%), Gaps = 37/320 (11%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L C + +A++ F R + S+I+TSGTLSP+D + L +R + K
Sbjct: 445 VLQLSCLDASLAIKPVFERFK--SVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKS 502
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
I +V G ++ + + RD ++ G +V IA VPDG++ FF SY M++ +
Sbjct: 503 ICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVV 562
Query: 534 ACWKNTSHGNLTTIWER--ICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
W++ G L I ER I K VVE LA++++ + S GA+F +V
Sbjct: 563 QEWEDG--GILRQILERKLIFIETKDVVET------TLALDNF--RRACDSGRGAIFLSV 612
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
RGKV+EG+DF H GRAV++ G+PF P +R + EYL +TK +
Sbjct: 613 ARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYL------------QTKFH-I 659
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYS- 710
+ D+ A R Q VGRVIR + DYG +IF D R+ +++++ WI + C
Sbjct: 660 NPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWI---LDCMGT 716
Query: 711 -----KFGDVVYTLTRFFRE 725
GD + + RF +E
Sbjct: 717 NHLDLSTGDAMDKVRRFLKE 736
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 149/325 (45%), Gaps = 57/325 (17%)
Query: 1 MPTYKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M + + G+D+ FP++ Y+ Q YM ++ ++L K + LLE PTGTGKT+CL+
Sbjct: 1 MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLI------ 54
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSN 118
S + S Q ++ ++Y +RT ++ + ++E+ K +
Sbjct: 55 ----------------------SLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVID 92
Query: 119 YRPK----------MVILGSREQLCIH-REVSLLRGSAQNNACRFLCKKGTNRRCNHHSR 167
YR K V L SR LCIH R + A ++ACR + +R +
Sbjct: 93 YRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSAN 152
Query: 168 VA------DYMKNNPHLG--DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
V +Y KN G ++DL +G+ G CPYF+ R + +I+ Y Y
Sbjct: 153 VELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQY 212
Query: 220 LIDPWFRKGLGVEWK-NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISS 278
++DP + E + SI++FDEAHN++ +C +A S +L + +A C+ S
Sbjct: 213 VLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDE----RSLDKATRCLGKLS 268
Query: 279 T---RRGQSSDETLNPDNFAILRAL 300
T + Q LN + ++R L
Sbjct: 269 TEVSKMKQKDANKLNEEYQRLVRGL 293
>gi|156083254|ref|XP_001609111.1| DNA repair helicase (rad3) and DEAD_2 domain containing protein
[Babesia bovis T2Bo]
gi|154796361|gb|EDO05543.1| DNA repair helicase (rad3) and DEAD_2 domain containing protein
[Babesia bovis]
Length = 775
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 147/628 (23%), Positives = 274/628 (43%), Gaps = 67/628 (10%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKMVILG---SREQLCIHREVSLLRGSAQNNACRFL 153
I+ SRT SQL Q ++E + K V +G R CI+ V R + N
Sbjct: 158 IIICSRTFSQLNQYVKEFRRLGALSKNVKIGFVTGRSHTCINESV---RSNCHTN----- 209
Query: 154 CKKGTNRRCNHHSRVADYMKNNPHLGDE----PIDIEDLVNIGRTFGPCPYFMTRELQKT 209
+ N +C S D + L D P+D+EDL G FG CPY+ + + K
Sbjct: 210 --EEFNEQCCSIS--CDLRDDVSLLMDASIAYPMDLEDLRVFGTAFGACPYYASNKNVKD 265
Query: 210 VDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
D++ PY + + R+ + ++ +++ILI DEAHNL ++A S +S +L A I +
Sbjct: 266 CDVLLVPYISVFNESIRQSMNLKIEDNILIIDEAHNLLSAMSEAQSGRISGRVLCALIQQ 325
Query: 270 AKNCIDISSTRRGQSSDETLNP-----DNFAILRALLL--KLEK--RIAEVPINSKELGF 320
++ ++ + + ++ ++++ FA + +LL ++ K ++ +P LG
Sbjct: 326 CRSYLNKNGSTMTDAAKDSMSALSNLCQTFADCKTVLLGNRISKASQVFTIPRFLVALGL 385
Query: 321 TKPGPY-IYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKSTTACRIESISNILK 379
+ L+ + + Y + + A+ L D+ ++ +S A + + + +
Sbjct: 386 ESACLHSTIGFLSSDDFCKNMRYFGMKVAHRLAKALPADQPKSVESD-ASAVYTFRHFIS 444
Query: 380 IIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRL--EVGS 437
+ + S Y RV + ++ FN A + F + + S
Sbjct: 445 TLL-----SASLYDRV------------IFTPSTDDFEIEVFNVS-ADERFRSMTRDAKS 486
Query: 438 IILTSGTLSPMDSFAQELKLNFPLRVEN-PHVITSKQIWAGIVPVGPSGYLLNSSYRNRD 496
I+L SGTL+P++ F + + P V + + ++ G L +R+
Sbjct: 487 ILLMSGTLTPIEEFISLSPFGSDVIIHKAPPVFPIDRFYVSVLAADDQGSTLVYDSNSRE 546
Query: 497 SIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWER--ICKH 554
L N I ++ +VP+G++ F SY ++ + ++ ER I ++
Sbjct: 547 QKREISVLFNLIERLSSVVPNGIVCFLSSYTFLESFQSAFERAP--------ERVNILRN 598
Query: 555 KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITG 614
KK E R + ++ + K T+GA+ F V G SEG+DF D R V++ G
Sbjct: 599 KKVFFESRDKN-----VDTFGEYSKVALTTGAILFGVYGGSQSEGVDFHDGLARLVLLVG 653
Query: 615 MPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIR 674
+P+ T K+RL+R YL +A K + + D + VNQ++GR +R
Sbjct: 654 LPYPPET-VKLRLRRSYLKCRASQVDLPLKRREFYNMLSNDISTITCYKIVNQSIGRAMR 712
Query: 675 HRHDYGAIIFCDERFAHPSRKSQISLWI 702
H+ D+ A++ D R+ +S + ++
Sbjct: 713 HKDDFAALVLLDARYNDEKNRSYLPDYV 740
Score = 44.7 bits (104), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
PFE Y Q M + ++ L ESPTG+GKT+ +LC+ L W
Sbjct: 11 LPFEPYPSQKRLMHDSYRCIEESDFGLFESPTGSGKTIAMLCSALTW 57
>gi|195397135|ref|XP_002057184.1| GJ16955 [Drosophila virilis]
gi|194146951|gb|EDW62670.1| GJ16955 [Drosophila virilis]
Length = 799
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 37/337 (10%)
Query: 402 ANAAD--VLKGKASRTLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKL 457
+NAAD VL + TL + NP + F+ + E ++I+ GT+ P +L
Sbjct: 483 SNAADGRVLLNPKTCTLKYLLLNPA---EHFADIVSEARALIIAGGTMQPTHELTAQLFA 539
Query: 458 NFPLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARI 514
+ P RV HV+ + + ++P GP+G L +Y R S QEL + N+ +
Sbjct: 540 HCPERVVQRFYSHVVPADAVQPFVLPTGPTGAKLCFNYAQRASPAMLQELSMVLQNLCGV 599
Query: 515 VPDGLLIFFPSYYLMDQCIACWKNTSHGNL--TTIWERICKHKKPVVE-PRQSSLFPLAI 571
+P G++ F PSY +D T +G+L + +R+ + K+ E S +
Sbjct: 600 LPAGVVCFLPSYDYLD--------TVYGHLEQSGALQRLGQRKRIFRETAGSGSGGVGGV 651
Query: 572 EDYMAKLKDT---STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLK 628
E + + D + GA+ +V GK+SEGL+FAD GR V++ GMP+ T P+++ +
Sbjct: 652 EQLLQQYADAIGQNAGGALLLSVVGGKLSEGLNFADDLGRGVIVVGMPYPNRTAPELKER 711
Query: 629 REYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
+LD ET L +G ++Y +AVNQ +GR +RH DY + DER
Sbjct: 712 MRHLD-----------ET-LGSGAGNEYYENLCMKAVNQCIGRSVRHIRDYACVYLLDER 759
Query: 689 FAHPSRKSQISLWIQPHIQCYSK-FGDVVYTLTRFFR 724
+A + ++ WI HI S FG V RFF+
Sbjct: 760 YASARIQQKLPAWIAQHITVASDGFGAVQARTARFFK 796
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 72/169 (42%), Gaps = 51/169 (30%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQNNACRFLC 154
I Y SRTHSQL Q++ EL+ + + + + LGSR+QLCI
Sbjct: 201 IFYCSRTHSQLAQIVTELRKTPHGQHARCIALGSRQQLCI-------------------- 240
Query: 155 KKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVF 214
+ ++L G G CPY+ TR Q +V
Sbjct: 241 -----------------------------NAQELAAAGAACGACPYYATRAAQAQAQLVL 271
Query: 215 APYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLL 263
PY+ L+ R+ LG++ + +I+I DEAHNL A S +LS G L
Sbjct: 272 LPYSLLLQRSSRQQLGIDLRGAIIIVDEAHNLLDTIAQLHSSELSLGQL 320
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 10 DVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
D FP+ Y Q M+++ L+ K + ESPTGTGK+L L C L W
Sbjct: 15 DFGFPYTPYAIQEQLMQQLFLVLERKQIGIFESPTGTGKSLTLTCGALTW 64
>gi|261200873|ref|XP_002626837.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis SLH14081]
gi|239593909|gb|EEQ76490.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis SLH14081]
Length = 773
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + LK L+ + +
Sbjct: 408 LHFTCLDAAIAIKPVFDRF--SSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSF 465
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 466 LPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIIS 525
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +W +K +VE S LA+E Y + + GAV V RG
Sbjct: 526 MWQGM--GILDLVW----NYKLILVETPDSQESSLALETY--RTACCNGRGAVLLCVARG 577
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 578 KVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD 630
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRVIR + DYG ++ D RF R+SQ+ WI
Sbjct: 631 ------AMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRSQLPKWI 670
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 50/264 (18%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + +LE P+GTGKT+ LL +A+ Q
Sbjct: 6 KTLDAGGHCVLEMPSGTGKTVSLLSLIIAY----------------------------QQ 37
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREVS 139
+ ++Y SRT S++ + + ELK YR + + L SR+ LC+H V
Sbjct: 38 HRPEQRKLIYCSRTMSEIEKALAELKALMKYRTRQLGYAEDFRGLGLTSRKNLCLHPSVK 97
Query: 140 LLRGSAQNNA-CRFLCKKGTNRR---------CNHHSRVADYMKNNPHLGDEPIDIEDLV 189
+ A +A CR L + C +H + D ++ + + ++D++
Sbjct: 98 REKSGAVVDARCRSLTAGFVKEKKERGEDVELCIYHENL-DLLEPSNLVPPGVFTLDDII 156
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEG 248
G CPYF R + +++ Y+YL+DP + + E K+SI++FDEAHN++
Sbjct: 157 KYGEQHKQCPYFSIRRMMPFCNVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDN 216
Query: 249 ICADAASFDLSSGLLTACISEAKN 272
+C ++ S DL+ L A N
Sbjct: 217 VCIESLSIDLTEDSLRKASRGATN 240
>gi|146415208|ref|XP_001483574.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 151/290 (52%), Gaps = 30/290 (10%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SK 472
L + C + IAM+ F R S+I+TSGT+SP+D + + LNF ++ + +T +
Sbjct: 496 LHFTCLDASIAMKPVFDRF--SSVIITSGTISPLDMYPR--MLNFQTVIQESYTMTLARR 551
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
IV G ++S + R+ + G+ ++ ++I PDG+++FFPSY M+
Sbjct: 552 SFLPMIVTKGADQVSISSQFEIRNDPSVVRNYGSLLIEFSKITPDGMVVFFPSYLYMESI 611
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
I+ W+ + G L +W KHK +VE + + LA+E Y ++ GAV +V
Sbjct: 612 ISMWQ--TMGVLDEVW----KHKLILVETPDAQVTSLALETYRKAC--SNGRGAVLLSVA 663
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGKVSEG+DF H GR V++ G+PF ++ + E+L Q + ++ LSF
Sbjct: 664 RGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDNYQIRENDF----LSF-- 717
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF +K+Q+ WI
Sbjct: 718 -------DAMRHAAQCLGRVLRGKDDYGIMVLADRRFRR--KKNQLPKWI 758
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 62/320 (19%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 56 FFIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAY--- 112
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K YR
Sbjct: 113 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEYRA 147
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
+ + L SR+ LCIH +S R G+ + CR + ++
Sbjct: 148 EELGYVEDFRGLGLTSRKNLCIHPTISKERKGNVVDEKCRRITNGQLKQKIELGAVSPDL 207
Query: 162 ----------CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
CN+H + D M ++ ++ + + L+N + CPYF R + +
Sbjct: 208 QANNPEAYTLCNYHENMND-MDSHSYVPNGVYSFDGLINYSKEKQICPYFTVRRMIPFCN 266
Query: 212 IVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
I+ Y+YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL+ L A
Sbjct: 267 IIIYSYHYLLDPKIAERVSKELSKDSIIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGA 326
Query: 271 KNCIDISSTRRGQSSDETLN 290
+ + Q S++ N
Sbjct: 327 NKLGEAVDEMKAQDSEKLQN 346
>gi|348678980|gb|EGZ18797.1| hypothetical protein PHYSODRAFT_354695 [Phytophthora sojae]
Length = 791
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 147/298 (49%), Gaps = 24/298 (8%)
Query: 406 DVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE 464
D G L C + +A++ F R S+I+TSGTLSP+D + + L N +R
Sbjct: 455 DSASGVHDPVLQLSCLDASLAIRPVFERF--SSVIITSGTLSPIDLYPRLLNFNPVIRES 512
Query: 465 NPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
P + I ++ G +++ + RD + + G ++ +A PDG++ FFP
Sbjct: 513 LPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDMSVVRNYGTLLLEMASCTPDGMVCFFP 572
Query: 525 SYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS 584
SY M++ I W + + +R+ K +E + LA+++Y K
Sbjct: 573 SYLYMEKIIGQWDSLG------VLKRVLSSKLLFIETKDIVETTLALDNY--KKACDCGR 624
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
GA+FF+V RGKV+EG+DF H GRAV++ G+PF +R + EYL Q + G++
Sbjct: 625 GAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDF- 683
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
L+F A R Q GRV+R + DYG +IF D R+ +++++ WI
Sbjct: 684 ---LTF---------DALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWI 729
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 68/293 (23%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G++V FP+E Y QL YM ++ ++L + + +LE PTGTGKT+ LL LA++ +
Sbjct: 5 IDGLEVLFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLALVLAYKHA-- 62
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------TSN 118
T G ++Y +RT ++ + ++E+K T++
Sbjct: 63 -HPTAGK-------------------------LVYCTRTVPEMAKCVEEIKKLAQYRTAH 96
Query: 119 Y-----RPKMVILGSREQLCIH-REVSLLRGSAQNNACRFLCKK---------------- 156
Y + V L SR +C+H R ++ G + CR +
Sbjct: 97 YGADKAQLTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRARAAKAREAAASG 156
Query: 157 ------GTNRR----CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTREL 206
G R C+ + ++ L ++DL IG G CPYF+TR +
Sbjct: 157 DVPMDGGEQVREVETCSFYENYDARKSDDTVLPPGIYSVDDLKEIGAKKGWCPYFLTRYV 216
Query: 207 QKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDL 258
D+V Y Y++DP + + + K SI++FDEAHN++ +C +A S DL
Sbjct: 217 VTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDL 269
>gi|321463407|gb|EFX74423.1| hypothetical protein DAPPUDRAFT_324413 [Daphnia pulex]
Length = 760
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 153/293 (52%), Gaps = 24/293 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F+R + ++++TSGTLSP+D + + L + + + I
Sbjct: 433 LYFSCLDSSIAIKPVFNRFQ--TVVITSGTLSPLDMYPKILDFHPVIMTSFTMTLARPCI 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S Y R+ + GN +V +A VPDG++ FF SY ++ ++
Sbjct: 491 LPMIVSKGNDQVAMSSRYETREDTAVIRNYGNLLVEVAAAVPDGIVCFFTSYLYLETIVS 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + I +++ +HK +E + ++ LA+ +Y+ + GAV +V RG
Sbjct: 551 SWYDQG------IIDQLQRHKLLFIETQDAAETSLALINYIKACDNGR--GAVLLSVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ +R + EYL Q Q + ++ L+F
Sbjct: 603 KVSEGIDFDHHLGRAVLMFGIPYVYTQSRILRARLEYLRDQFQIRENDF----LTF---- 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q +GR +R + DYG +I D+RF+ ++S++ WIQ H++
Sbjct: 655 -----DAMRHAAQCLGRCMRGKTDYGIMILADKRFSRADKRSKLPKWIQEHLK 702
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 50/283 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ +L K + LLE P+GTGKT LL +A+ K+
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKHALDAKGHCLLEMPSGTGKTTTLLSLIVAYMKA-- 62
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
L ++Y SRT ++ +V++EL K NY K
Sbjct: 63 -------------------------HPLDLTKLVYCSRTVPEIEKVMEELRKLMNYYEKE 97
Query: 124 V-----ILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------CNH 164
+ ILG SR+ LCIH VS R G + C L R CN
Sbjct: 98 MGMEQNILGLALSSRKNLCIHPSVSKEREGKVVDGRCYGLTASFVRARHAGDDAVPVCNF 157
Query: 165 HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
+ + K P L +++DL G+ G CPYF+ R +IV Y+YL+DP
Sbjct: 158 YEGFDAHGKEFP-LPPGVYNLDDLKEYGQAKGWCPYFLARYTITHANIVVYSYHYLLDPK 216
Query: 225 FRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ + E K S+++FDEAHN++ +C D+ S ++ LL C
Sbjct: 217 IAEVVSKEISKTSVVVFDEAHNIDNVCIDSMSVKITKRLLDKC 259
>gi|1517816|gb|AAB06962.1| helicase [Homo sapiens]
Length = 906
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E+G + N+ +VP G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +++ D+R+A P +++ WI+
Sbjct: 827 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAVQKFHREK 902
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + D+E L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYVERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|327351176|gb|EGE80033.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis ATCC 18188]
Length = 773
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + LK L+ + +
Sbjct: 408 LHFTCLDAAIAIKPVFDRF--SSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSF 465
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 466 LPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIIS 525
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +W +K +VE S LA+E Y + + GAV V RG
Sbjct: 526 MWQGM--GILDLVW----NYKLILVETPDSQESSLALETY--RTACCNGRGAVLLCVARG 577
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 578 KVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD 630
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRVIR + DYG ++ D RF R+SQ+ WI
Sbjct: 631 ------AMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRSQLPKWI 670
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 50/264 (18%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + +LE P+GTGKT+ LL +A+ Q
Sbjct: 6 KTLDAGGHCVLEMPSGTGKTVSLLSLIIAY----------------------------QQ 37
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREVS 139
+ ++Y SRT S++ + + ELK YR + + L SR+ LC+H V
Sbjct: 38 HRPEQRKLIYCSRTMSEIEKALAELKALMKYRTRQLGYAEDFRGLGLTSRKNLCLHPSVK 97
Query: 140 LLRGSAQNNA-CRFLCKKGTNRR---------CNHHSRVADYMKNNPHLGDEPIDIEDLV 189
+ A +A CR L + C +H + D ++ + + ++D++
Sbjct: 98 REKSGAVVDARCRSLTAGFVKEKKERGEDVELCIYHENL-DLLEPSNLVPPGVFTLDDII 156
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEG 248
G CPYF R + +++ Y+YL+DP + + E K+SI++FDEAHN++
Sbjct: 157 KYGEQHKQCPYFSIRRMMPFCNVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDN 216
Query: 249 ICADAASFDLSSGLLTACISEAKN 272
+C ++ S DL+ L A N
Sbjct: 217 VCIESLSIDLTEDSLRKASRGATN 240
>gi|380420358|ref|NP_001244074.1| probable ATP-dependent RNA helicase DDX11 isoform 4 [Homo sapiens]
gi|29476793|gb|AAH50069.1| DDX11 protein [Homo sapiens]
Length = 880
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 568 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 626
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E+G + N+ +VP G++ FFPSY
Sbjct: 627 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 686
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 687 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQV 740
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 741 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 800
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +++ D+R+A P +++ WI+
Sbjct: 801 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYARPPVLAKLPAWIR 853
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 854 ARVEVKATFGPAIAAVQKFHREK 876
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 203 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 261
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + D+E L+ +G+
Sbjct: 262 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEA 321
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 322 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 381
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 382 VEVSGSQLCQAHSQLLQYVERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 433
Query: 316 KE 317
K+
Sbjct: 434 KQ 435
>gi|190347854|gb|EDK40205.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 151/290 (52%), Gaps = 30/290 (10%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--SK 472
L + C + IAM+ F R S+I+TSGT+SP+D + + LNF ++ + +T +
Sbjct: 496 LHFTCLDASIAMKPVFDRF--SSVIITSGTISPLDMYPR--MLNFQTVIQESYTMTLARR 551
Query: 473 QIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQC 532
IV G ++S + R+ + G+ ++ ++I PDG+++FFPSY M+
Sbjct: 552 SFLPMIVTKGADQVSISSQFEIRNDPSVVRNYGSLLIEFSKITPDGMVVFFPSYLYMESI 611
Query: 533 IACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVC 592
I+ W+ + G L +W KHK +VE + + LA+E Y ++ GAV +V
Sbjct: 612 ISMWQ--TMGVLDEVW----KHKLILVETPDAQVTSLALETYRKAC--SNGRGAVLLSVA 663
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLS 652
RGKVSEG+DF H GR V++ G+PF ++ + E+L Q + ++ LSF
Sbjct: 664 RGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRDNYQIRENDF----LSF-- 717
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF +K+Q+ WI
Sbjct: 718 -------DAMRHAAQCLGRVLRGKDDYGIMVLADRRFRR--KKNQLPKWI 758
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 62/320 (19%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT+ LL T+A+
Sbjct: 56 FFIDDLPVLFPYPRIYPEQYAYMSDIKKTLDVGGNCILEMPSGTGKTISLLSLTVAY--- 112
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRP 121
Q + I+Y SRT S++ + + EL K YR
Sbjct: 113 -------------------------QMHYPEHRKIVYCSRTMSEIEKALIELHKLMEYRA 147
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
+ + L SR+ LCIH +S R G+ + CR + ++
Sbjct: 148 EELGYVEDFRGLGLTSRKNLCIHPTISKERKGNVVDEKCRRITNGQLKQKIESGAVSPDL 207
Query: 162 ----------CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVD 211
CN+H + D M ++ ++ + + L+N + CPYF R + +
Sbjct: 208 QANNPEAYTLCNYHENMND-MDSHSYVPNGVYSFDGLINYSKEKQICPYFTVRRMIPFCN 266
Query: 212 IVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEA 270
I+ Y+YL+DP + + E K+SI+IFDEAHN++ +C ++ S DL+ L A
Sbjct: 267 IIIYSYHYLLDPKIAERVSKELSKDSIIIFDEAHNIDNVCIESLSLDLTDDTLKRATRGA 326
Query: 271 KNCIDISSTRRGQSSDETLN 290
+ + Q S++ N
Sbjct: 327 NKLGEAVDEMKAQDSEKLQN 346
>gi|354492614|ref|XP_003508442.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Cricetulus griseus]
Length = 771
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 18/265 (6%)
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HVI I I+ GPS L +Y+ RD + +E G + N+ +VP G++ FFPSY
Sbjct: 514 HVIPPDNILPLIICSGPSNQQLEFTYQRRDLPQMMEETGRVLCNLCNVVPGGVVCFFPSY 573
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKL-----KDT 581
+ Q A W T + R+ KK EP+++S + Y +
Sbjct: 574 EYLRQIHAHWDKTG------LLARLSVKKKLFQEPKRASQVEQVLMAYSKCIMCCGQAGG 627
Query: 582 STSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
+GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++ K YLD G
Sbjct: 628 HLTGALLLSVVAGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLDQTLPRTQG 687
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
+ G+ +AVNQ++GR IRH+ D+ +I+F D R+A P +++ W
Sbjct: 688 QAP-------PGKVLVENLCMKAVNQSIGRAIRHQRDFASIVFLDHRYARPPVLAKLPAW 740
Query: 702 IQPHIQCYSKFGDVVYTLTRFFREE 726
I+ ++ + FG L +F RE+
Sbjct: 741 IRDRVEVKATFGPAFAALRKFHREK 765
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q I E++ S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 224 IYYCSRTHSQLAQFIHEVQKSPFGKETRLVSLGSRQNLCVNEDVKSL-GSVQLMNDRCVD 282
Query: 153 LCKK-------GTNRRCNHHSRVADYMKNNPH-----LGDEPI----DIEDLVNIGRTFG 196
+ + G + R+ + H L DE + D+E LV +G+
Sbjct: 283 MQRSKHEKTGAGEDMPKKRRRRIQTSCPFHNHEQMQLLRDEILLEVKDMEQLVALGKEAR 342
Query: 197 PCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
CPY+ +R +V PY L+ R+ G+ + ++I DEAHNL
Sbjct: 343 ACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRLQGQVVIIDEAHNL 392
>gi|301097762|ref|XP_002897975.1| TFIIH basal transcription factor complex helicase subunit
[Phytophthora infestans T30-4]
gi|262106420|gb|EEY64472.1| TFIIH basal transcription factor complex helicase subunit
[Phytophthora infestans T30-4]
Length = 763
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 24/298 (8%)
Query: 406 DVLKGKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVE 464
D G L C + +A++ F R S+++TSGTLSP+D + + L N +R
Sbjct: 427 DSASGVHDPVLQLSCLDASLAIRPVFERF--SSVVITSGTLSPIDLYPRLLNFNPVIRES 484
Query: 465 NPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFP 524
P + I ++ G +++ + RD + + G ++ +A PDG++ FFP
Sbjct: 485 LPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFP 544
Query: 525 SYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS 584
SY M++ I W + + +R+ K +E + LA+++Y K
Sbjct: 545 SYLYMEKIIGQWDSLG------VLKRVLSSKLLFIETKDIVETTLALDNY--KKACDCGR 596
Query: 585 GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
GA+FF+V RGKV+EG+DF H GRAV++ G+PF +R + EYL Q + G++
Sbjct: 597 GAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDF- 655
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
L+F A R Q GRV+R + DYG +IF D R+ +++++ WI
Sbjct: 656 ---LTF---------DALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWI 701
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 42/266 (15%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G++V FP+E Y QL YM ++ ++L + + +LE PTGTGKT+ LL LA++
Sbjct: 5 IDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYK---A 61
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRPKM 123
+ T G ++Y +RT ++ + ++E+K YR
Sbjct: 62 AHPTAGK-------------------------LVYCTRTVPEMAKCVEEIKKLIKYREHY 96
Query: 124 ---------VILGSREQLCIH-REVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMK 173
V L SR +C+H R ++ G + CR + C+ +
Sbjct: 97 YGDKAQVTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVET-CSFYENYDARKS 155
Query: 174 NNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW 233
N+ L ++DL +G G CPYF+TR + D+V Y Y++DP + + +
Sbjct: 156 NDTVLPPGVYSVDDLKELGVKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSF 215
Query: 234 -KNSILIFDEAHNLEGICADAASFDL 258
K SI++FDEAHN++ +C +A S DL
Sbjct: 216 EKESIVVFDEAHNIDNVCIEALSVDL 241
>gi|100913202|ref|NP_085911.2| probable ATP-dependent RNA helicase DDX11 isoform 1 [Homo sapiens]
Length = 906
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E+G + N+ +VP G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +++ D+R+A P +++ WI+
Sbjct: 827 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASVVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAVQKFHREK 902
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCK----------KGTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + + +R + A N+ +G DE + D+E L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYVERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|14590576|ref|NP_142644.1| hypothetical protein PH0697 [Pyrococcus horikoshii OT3]
gi|3257105|dbj|BAA29788.1| 641aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 641
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 175/728 (24%), Positives = 311/728 (42%), Gaps = 157/728 (21%)
Query: 13 FPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+E + Q ++E V ++++ N ++E+PTG GKT+ +L L + SLG
Sbjct: 7 FPYEKFRPNQREFIEIVKEAVKRGENLIVEAPTGFGKTISVLAGVLPYAISLGY------ 60
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSR 129
++Y +RTH Q+ +VI+EL+ + ++ + SR
Sbjct: 61 ------------------------KVVYLARTHKQMDRVIEELRKIGEKSEVSGIEFRSR 96
Query: 130 EQLCIHREVSLLRGSAQNN--ACRFLCKKGTNRRCNHH----------SRVADYMKNNPH 177
+ LC+H + A + C+ L K G +C ++ + + + P
Sbjct: 97 KDLCLHAYIQTFAQDAYTSMIVCKSLRKLG---KCKYYENLKEKRDRVDEIVKFFLSFPP 153
Query: 178 LGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEW 233
E I+ +L+ + CPY +T+++ + ++V A Y Y+I P R+ LGV++
Sbjct: 154 FPREVIEYSELLEL------CPYEITKKVGEKANVVVASYLYMISPPIRQAFLENLGVDY 207
Query: 234 KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDN 293
+ I+IFDEAHNL A S LS + I EA+ G+ E N
Sbjct: 208 SDLIVIFDEAHNLPDQAISALSDRLSVRSIERAIKEAEEY--------GEKDIE-----N 254
Query: 294 F--AILRALLLKLEKRI-----AEVPINSKELGFTKPGPYIYELLADLNITQETAYKLID 346
F +LR L + ++++ E+PI +E+ F P + D+ + E D
Sbjct: 255 FLSILLRGLEILYKEKLENYESEEIPIRPEEV-FLHPASILGWRGRDIGMMLE------D 307
Query: 347 IVEVAAELLQEDKLQNK---KSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADAN 403
++EV + ++ED+++ +S E + N L + RD+ Y + +E
Sbjct: 308 MIEV-GDAIREDRIERNLPPRSYVGRVGEFLWNWLSL--RDR----EDYLHLFTKE---- 356
Query: 404 AADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLN----- 458
KG A L +P +A+ EV S I SGTLSP+++F + +N
Sbjct: 357 -----KGLA---LELVALDPSVALDFLE--EVHSAIFMSGTLSPLEAFRDIIGVNARLKK 406
Query: 459 FP--LRVENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVP 516
FP ++ EN V+ ++ + + P Y + + I + P
Sbjct: 407 FPRIVKRENAIVLVARDVSTRGIERSPPLY---------------KRIAEYIFEAVKNTP 451
Query: 517 DGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMA 576
+ +F SY +++ ++ H I E + KK +E + + P D M
Sbjct: 452 KNVGVFTASYEVLEGVLST---NVH---IKIEEEVG--KKVFIEKKDA---PSRENDEMI 500
Query: 577 K--LKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDL 634
+ +++ GAV F V G+ SEG D++ V++ G+P+A T P+V+ + Y +
Sbjct: 501 REFKEESKGKGAVLFGVMGGRNSEGQDYSGDEMNGVILVGIPYARPT-PRVQAQTRYFEK 559
Query: 635 QAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
+ +G Y Y A R + QA GRV R ++ G+I+ D R +
Sbjct: 560 KFPGKGRYYG------------YILPAHRKLAQAAGRVHRSENEKGSIVILDYRVLWKNV 607
Query: 695 KSQISLWI 702
K + W+
Sbjct: 608 KKDLPDWM 615
>gi|239607217|gb|EEQ84204.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis ER-3]
Length = 779
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + LK L+ + +
Sbjct: 414 LHFTCLDAAIAIKPVFDRF--SSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSF 471
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 472 LPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIIS 531
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +W +K +VE S LA+E Y + + GAV V RG
Sbjct: 532 MWQGM--GILDLVW----NYKLILVETPDSQESSLALETY--RTACCNGRGAVLLCVARG 583
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 584 KVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD 636
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRVIR + DYG ++ D RF R+SQ+ WI
Sbjct: 637 ------AMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRSQLPKWI 676
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 51/282 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + ++Y SRT S++ + + ELK YR
Sbjct: 60 -------------------------QQHRPEQRKLIYCSRTMSEIEKALAELKALMKYRT 94
Query: 122 KMVI---------LGSREQLCIHREVSLLRGSAQNNA-CRFLCKKGTNRRCNHHSRVADY 171
+ + L SR+ LC+H V + A +A CR L G N D
Sbjct: 95 RQLGYAEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTA-GFN---------LDL 144
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGV 231
++ + + ++D++ G CPYF R + +++ Y+YL+DP + +
Sbjct: 145 LEPSNLVPPGVFTLDDIIKYGEQHKQCPYFSIRRMMPFCNVIIYSYHYLLDPKIAERVSQ 204
Query: 232 EW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
E K+SI++FDEAHN++ +C ++ S DL+ L A N
Sbjct: 205 ELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGATN 246
>gi|239793449|dbj|BAH72839.1| ACYPI008186 [Acyrthosiphon pisum]
Length = 325
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 152/288 (52%), Gaps = 24/288 (8%)
Query: 420 CFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWA-GI 478
C + IA++ ++++TSGTLSP+D + + L +N P+ + + + S+Q + +
Sbjct: 5 CLDASIAIKPILDY-FNTVLITSGTLSPLDMYPKILNIN-PVIMTSLTMTLSRQCFLPMV 62
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
V G L S + +R+ + G+ ++ + ++VPDG++ FFPSY M +A W +
Sbjct: 63 VGRGNDQVALTSKWESREDSSVARNYGHLLLEMVKVVPDGVVCFFPSYLYMKSVVAAWYD 122
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
+ E+I +K +E + + AI+ Y ++ GA+ +V RGKVSE
Sbjct: 123 QG------LIEKILDYKLIFIETQNIVVTNHAIKCYAEAIE--RGKGALLLSVARGKVSE 174
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G+DF H GRAV++ GMP+ ++ + EYL Q Q G++ L+F
Sbjct: 175 GMDFDHHYGRAVIVLGMPYVYTQCRILKARMEYLCSQYQISEGDF----LTF-------- 222
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG ++F D+RFA ++S++ WIQ ++
Sbjct: 223 -DAMRHTAQCVGRAIRGKMDYGIMVFADKRFARHDKRSKLPKWIQAYL 269
>gi|449491848|ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cucumis
sativus]
Length = 1168
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 165/331 (49%), Gaps = 55/331 (16%)
Query: 437 SIILTSGTLSPMDSFAQEL-------KLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
+++L GTL P++ + L +LNF H++ + I V GPSG L +
Sbjct: 575 AVVLAGGTLQPIEETRERLFPWLPPSQLNF---FSCSHIVPPESILPMAVSSGPSGQLFD 631
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
SY R S +ELG + NI +VP+G+++FF S+ +Q WK + I +
Sbjct: 632 FSYNRRSSSAIVKELGLLLCNIVTVVPEGIVVFFSSFDYEEQVYGLWKTSG------ILD 685
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKL-----KD-----TSTSGAVFFAVCRGKVSEG 599
RI K K+ EPR+++ +++Y + KD STSGAV FAV GK+SEG
Sbjct: 686 RIMKKKRIFREPRKNTDVESVLKEYKENIDALSKKDPKQNILSTSGAVLFAVVGGKISEG 745
Query: 600 LDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ------------GGEYKETK 647
++ +D GR +V+ G+P+ + +D ++ + ++++ S G+ ET
Sbjct: 746 INLSDGMGRCIVMVGLPYPSPSDIELMERVKHIENLGNSNSIKSSKFYNDVPSGDV-ETG 804
Query: 648 LSFL----SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER---------FAHPSR 694
L L G+++Y +AVNQ++GR IRH +DY AI+ D R F+HP+
Sbjct: 805 LEILRSCKRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDVRYTSNSSKRSFSHPAD 864
Query: 695 KSQISLWIQP-HIQCYSKFGDVVYTLTRFFR 724
K + WI+ I +G+V L +F +
Sbjct: 865 K--LPKWIKDCLIASTENYGEVHRRLNQFLK 893
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 91/175 (52%), Gaps = 26/175 (14%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRGSAQ--NNACRF 152
+ + SRTHSQL Q I+EL+ + + ++ + LGSR+ CI+ EV L GSA N C
Sbjct: 199 VYFCSRTHSQLSQFIRELRKTVFASELNVICLGSRKIFCINEEV-LKLGSASHINEQCLE 257
Query: 153 LCKK------------GTNRRCNHHSRVADYMKNNPHLGD---------EPIDIEDLVNI 191
L KK G + + M NP L E +DIEDL+++
Sbjct: 258 LQKKKTTETSKAKKLAGAGKMSRTKASSGCPMLRNPKLQKNFRSQISQREALDIEDLIHL 317
Query: 192 GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
GR G CPY+ +R L + D++ PY L+ R+ LG+ KNSI+I DEAHNL
Sbjct: 318 GRKVGTCPYYGSRSLVQGADLIVLPYQSLLSKSSRESLGLVLKNSIVIIDEAHNL 372
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP++ Y Q +M+ + + L ++LESPTGTGKTL ++C TL W
Sbjct: 14 FPYKPYSIQFDFMKALYEYLNKGGISMLESPTGTGKTLSIICGTLQW 60
>gi|357468391|ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
gi|355505535|gb|AES86677.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
Length = 1129
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 170/346 (49%), Gaps = 62/346 (17%)
Query: 434 EVGSIILTSGTLSPMDSFAQELKLNFPLRVENP-------HVITSKQIWAGIVPVGPSGY 486
E +++L GTL P++ + L FP N H++ + I V GP+G
Sbjct: 571 EAHAVVLVGGTLQPIEETRERL---FPWLPPNKLHFFSCGHIVPPESILPIAVSCGPTGR 627
Query: 487 LLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTT 546
+ SY +R S + QELG + N+ +VP G+++FFPS+ + W+++
Sbjct: 628 SFDFSYSSRSSADMMQELGLLLCNLVTVVPQGIVVFFPSFDYESRVYENWESSG------ 681
Query: 547 IWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDT--------------STSGAVFFAVC 592
I ERI K K+ EPR + + +E + + KDT S +GAV AV
Sbjct: 682 ILERITKRKRVFREPRNN----MDVESVLKEYKDTIYTPSSVNSEVNQASHTGAVLLAVV 737
Query: 593 RGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQS-------------- 638
K+SEG++ +D GR +++ G+P+A+ +D ++ + +++D S
Sbjct: 738 GAKLSEGINLSDGMGRCIIMVGLPYASPSDIELLERIKHIDGFRNSKFLENPGFSASYDV 797
Query: 639 -----QGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
QGG + + G+++Y +AVNQ++GR IRH +DY AI+ D R+A S
Sbjct: 798 YGGDIQGG-FDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDS 856
Query: 694 RK-------SQISLWIQPHIQCYSK-FGDVVYTLTRFFREERICGS 731
K +++ WI+ + S+ +G+V L++FF+ ++ C S
Sbjct: 857 SKRSFTHPTTKLPNWIKDRLVSSSRNYGEVHKLLSQFFKLKKTCSS 902
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 93/176 (52%), Gaps = 33/176 (18%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLLRGSAQ-NNACRFL 153
+ + SRTHSQL Q ++EL+ + + +M V LGSR+ LCI++EV L S++ N C L
Sbjct: 199 VYFCSRTHSQLSQFVKELRKTVFADEMGVVSLGSRKNLCINQEVLALGNSSRINERCLEL 258
Query: 154 CKKGTN-----------------------RRCNHHSRVADYMKNNPHLGDEPIDIEDLVN 190
KK N RR H R N P+DIEDL N
Sbjct: 259 QKKKKNDNLKAGTGARRTKASSGCPMLRKRRLQHEFR-------NEVSQQGPLDIEDLAN 311
Query: 191 IGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
+GRT G CPY+ +R + + VD+V PY L+ R+ LG+ K++I+I DEAHNL
Sbjct: 312 LGRTMGTCPYYGSRSMVRRVDLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNL 367
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FPF+ Y Q+ +M + QSL + ++LESPTGTGKT+ ++C+ L W
Sbjct: 17 FPFKPYSIQIDFMNALYQSLNHGGISMLESPTGTGKTMSVICSALQW 63
>gi|296234101|ref|XP_002762285.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Callithrix jacchus]
Length = 682
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 351 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 408
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 409 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 468
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 469 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 520
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 521 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSHILKARLEYLRDQFQ------------- 567
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 568 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 623
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 106/272 (38%), Gaps = 106/272 (38%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKN 174
+ L SR+ LCIH E+ H+ V Y
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEIL-------------------------HANVVVY--- 129
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
+ H +P I DLV ++EL + +VF
Sbjct: 130 SYHYLLDP-KIADLV-------------SKELARKAVVVF-------------------- 155
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
DEAHN++ +C D+ S +L+ L C
Sbjct: 156 ------DEAHNIDNVCIDSMSVNLTRRTLDRC 181
>gi|154276530|ref|XP_001539110.1| DNA repair helicase RAD3 [Ajellomyces capsulatus NAm1]
gi|150414183|gb|EDN09548.1| DNA repair helicase RAD3 [Ajellomyces capsulatus NAm1]
Length = 683
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + LK L+ + +
Sbjct: 318 LHFTCLDAAIAIKPVFDRF--SSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSF 375
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 376 LPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFPSYLYMESIIS 435
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +W +K +VE S LA+E Y + + GAV V RG
Sbjct: 436 MWQGM--GILDLVW----NYKLILVETPDSQESSLALETY--RTACCNGRGAVLLCVARG 487
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 488 KVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFL-------RENYRIRENDFLSFD 540
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRVIR + DYG +I D RF R++Q+ WI
Sbjct: 541 ------AMRHAAQCLGRVIRGKDDYGVMILADRRFQ--KRRTQLPKWI 580
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 31/148 (20%)
Query: 126 LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDI 185
L SR+ LC+H V + A +A RC S A ++K G+ D+
Sbjct: 33 LTSRKNLCLHPSVKREKSGAVVDA-----------RC--RSLTAGFVKEKKEKGE---DV 76
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAH 244
E + + P+ ++ Y+YL+DP + + E K+SI++FDEAH
Sbjct: 77 ELCI-----YHEMPF---------CKVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAH 122
Query: 245 NLEGICADAASFDLSSGLLTACISEAKN 272
N++ +C ++ S DL+ L A N
Sbjct: 123 NIDNVCIESLSIDLTEDSLRKASRGANN 150
>gi|156088687|ref|XP_001611750.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799004|gb|EDO08182.1| hypothetical protein BBOV_III006210 [Babesia bovis]
Length = 1062
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 147/648 (22%), Positives = 262/648 (40%), Gaps = 118/648 (18%)
Query: 155 KKGTNRRCNHHSRVADYMKNNPHLG-DEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIV 213
KK R + + Y +G D+P+++ G CPY+ + + + + V
Sbjct: 452 KKLARRLASPAQDITQYFSPKAMMGLDDPVEL----------GVCPYYAAKSIAQVSEFV 501
Query: 214 FAPYNYLID-PWFRKGLGVEWK-------------------------------------- 234
PY Y++D KG+ + K
Sbjct: 502 VCPYPYVLDLQAMVKGVSISQKVAGIIQTDPRFKSVKNETMEIMNDKTNVNGVPNLNIFG 561
Query: 235 ---NSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQS------- 284
+++L+FDE HN+E C + AS+D+ L+ +S K + G S
Sbjct: 562 NLNDTVLVFDEGHNVENACQEEASWDIKFDLIKRILSWIKKMREEVIASSGLSYVGVDDL 621
Query: 285 -SDETLNPDNFAIL-------RALLLKLEKRIAEVPINSKELGFTKPGP---YIYELLAD 333
+ E L IL LLL L+ ++ + I K+ G G Y ++ D
Sbjct: 622 KTAEKLGQQALGILLRVTRFLNDLLLFLQGFVSNLKIPPKK-GVDNRGESILYSWDTYDD 680
Query: 334 LNITQETAYKLIDIVEV---AAELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHS 390
+ A + ID + + + +L +Q + R ++ + + + + +
Sbjct: 681 KSNPLGGAQRFIDALNLDIASMYVLYCSVMQMRAFVRHLRPTTVRQVEEYLIHLEFMTAT 740
Query: 391 AYYRVHVREADANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDS 450
H E N ++ S +L W NP E + SI++ SGTLSP+ +
Sbjct: 741 MVMLCHKPEC-YNVLILVNANKSYSLGLWLMNPSAMFSELA-ANAKSIVIASGTLSPIPA 798
Query: 451 FAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLNSS-------YRNRDSIEYKQE 503
L F RV + T++Q+ G + V + S+ + N+ ++ +
Sbjct: 799 MVSSLGPEFESRVNGNIISTTQQLDPGNLAVYMVTHFSRSTKERIQCDFANQKDERFQTQ 858
Query: 504 LGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTS------HGNLTTIWERICKHKKP 557
LG+++ + ++P G LIFF S ++ CI W+ T+ HG TI++ I K
Sbjct: 859 LGHSLAKLLEVLPGGTLIFFTSKAILTSCIEHWRVTAYNDASVHGESRTIYDHIASLKGG 918
Query: 558 VV--EPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGM 615
+ EP ++S F +++ V FAVCR SEGL+ ++++ G+
Sbjct: 919 NLYQEPNEASEFQKLLKELHV------LDMFVMFAVCRSHSSEGLNLK---LSSLILVGL 969
Query: 616 PFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRH 675
P+ + P+V + R Y ++ G +Y +WY ++ RAVNQA+GR IR+
Sbjct: 970 PYPSTIAPRVDIARRY----NRASGQKY-----------NWYLRETFRAVNQAIGRCIRN 1014
Query: 676 RHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTRFF 723
+ D G II D R+ + + W P I+ ++ DV + + F
Sbjct: 1015 KKDRGVIILMDNRYKRD--REYLPSWTNPFIRSHNIVDDVRHDIQTGF 1060
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 6 IRGIDVEFPFEAYD-CQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V F F Q+ + K++ +L+N + +LESPTGTGKT +L +W
Sbjct: 201 IGGVQVLFHFPTMQKPQIQLLAKLMHALKNSQHVVLESPTGTGKTAAILAGVFSWM--FQ 258
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKMV 124
+ S VN + S + + +L ++Y +RTH+Q++QVIQ +KT +RP+
Sbjct: 259 NHIRDASMVNTDTKPGEGSAEKPKKQEPRL-RVIYLTRTHAQIKQVIQAVKTCGFRPRSC 317
Query: 125 ILGSREQLCIHR 136
+ SR Q+CI++
Sbjct: 318 SIASRLQMCIYK 329
>gi|397648208|gb|EJK78040.1| hypothetical protein THAOC_00085 [Thalassiosira oceanica]
Length = 1055
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 15/228 (6%)
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HVI + + +GPS L+ + R + E ELG +I+++ VP+G ++F PSY
Sbjct: 806 HVIPPSNVLTSCLSIGPSSRKLDFRHATRSTTEMIDELGFSILSLCDAVPNGFVVFLPSY 865
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGA 586
Q W++T G L I ++ C H+ EP+ S + Y AK T GA
Sbjct: 866 RYESQVFQRWRST--GMLQQIGKKKCIHR----EPKNSREVDDLLCRYSAKASATK-EGA 918
Query: 587 VFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKET 646
+ F+V GK+SEG++FADH R V++ G+PF +TDP ++ K LD + + G
Sbjct: 919 LLFSVMGGKMSEGINFADHLCRCVLVAGLPFPDITDPILKEKMSSLDKEKRDAG------ 972
Query: 647 KLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSR 694
++G+++Y R VNQ+VGR IRH DY AI+ CD R+A R
Sbjct: 973 --MGITGQEYYQNLCMRTVNQSVGRAIRHAKDYAAIVLCDFRYASDRR 1018
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 34/224 (15%)
Query: 79 GSQSSVNSSQSGD----SKLPTILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQL 132
G + + + GD S + ++Y +RTHSQ Q I ELK +++ K+V LGSR L
Sbjct: 349 GGNGTTDRTSVGDVTPGSGVRKVIYAARTHSQNSQFIGELKRTHWGKDVKVVALGSRSLL 408
Query: 133 CIHREVSLLRGSAQNNACRF-------LC------KKGTNRRC-NHHSRVADYMKNNPHL 178
C + E L + R +C K G+ +R + ++ + PHL
Sbjct: 409 C-NNEAVLYSSRTNKKSSRRTESEITEMCLDMQKSKTGSGKRTSDGKAKGKNTSSKCPHL 467
Query: 179 GD-------------EPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
P DIED+ ++G+ C Y+ +RE ++V PYN L+ P
Sbjct: 468 TSSESISTLALHSLARPTDIEDMASLGKASNCCSYYASREALAAAEVVVVPYNTLLSPQA 527
Query: 226 RKGLGVEWKNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
R+ +G+ K ++++ DEAHN +S LS +L A + +
Sbjct: 528 RESVGLSIKGALIVVDEAHNTPETLRALSSCSLSLAVLKAALDQ 571
>gi|348557833|ref|XP_003464723.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Cavia porcellus]
Length = 760
Score = 146 bits (368), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPVLHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYRP- 121
++ ++Y SRT ++ +VI+EL+ S Y
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQ 97
Query: 122 ---KMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
K+ LG SR+ LCIH EV+ LR G + C L + + +
Sbjct: 98 EGEKLSFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDTSMPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +G+ G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGRQVPLPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|146741362|dbj|BAF62336.1| DNA-repair protein complementing XP-D cells [Sus scrofa]
Length = 756
Score = 146 bits (368), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 425 ANPVLHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 482
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 483 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 542
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 543 STVAAWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 594
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 595 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 641
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 642 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 697
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 137/284 (48%), Gaps = 52/284 (18%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 1 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYRP- 121
++ ++Y SRT ++ +VI+EL+ S Y
Sbjct: 60 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQ 93
Query: 122 ---KMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNH-----HSRV 168
K+ LG SR+ LCIH EV+ LR G + C L + H R
Sbjct: 94 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDPSLPHCRF 153
Query: 169 ADYMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
Y + + H P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 154 --YEEFDVHGRQVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDP 211
Query: 224 WFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ +L C
Sbjct: 212 KIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRMLDRC 255
>gi|212224189|ref|YP_002307425.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus onnurineus
NA1]
gi|212009146|gb|ACJ16528.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus onnurineus
NA1]
Length = 666
Score = 146 bits (368), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 179/746 (23%), Positives = 309/746 (41%), Gaps = 148/746 (19%)
Query: 13 FPFEAYDC-QLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGS 71
FP+E+ Q ++E V ++++N NA++E+PTG GKT+ +L L + +G
Sbjct: 30 FPYESLRPHQREFIELVNEAVKNGENAIIEAPTGFGKTVSVLAGILPYAIEMGY------ 83
Query: 72 QVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSR 129
+LY +RTH Q+ +VI+ELK N + + V L SR
Sbjct: 84 ------------------------KVLYLARTHRQMDRVIEELKAINRKTPISGVELRSR 119
Query: 130 EQLCIHREVSLLRGSAQNN--ACRFLCKKGTNRRC----NHHSRVADYMKNNPHLGDEPI 183
+ LC+H ++ A N C+ L K G +C N + ++ + EP
Sbjct: 120 KDLCLHSYLTQFTTDAYNAMVVCKNLKKLG---KCPFYENEKKKKTEFDELIKFFLQEPS 176
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEWKNSILI 239
++++ +T CPY +TR + + +++ A Y YL+ P R+ L +++ + I++
Sbjct: 177 HPMEILDYAQTLELCPYDLTRRIAEKANVIVASYLYLLSPTIRENFLSSLDIDYSDLIVV 236
Query: 240 FDEAHNLEGICADAASFDLSSGLLTACISEAK--------NCIDISSTRRGQSSDETLNP 291
FDEAHNL A S LS + I EA N + I +E L
Sbjct: 237 FDEAHNLPDQAISALSDRLSIHTVNRAIKEADEYREHEIANFLSIFGKGLEMLYEEKLR- 295
Query: 292 DNFAILRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVA 351
E+ + EVPI EL F ++ LN+ K ++ +
Sbjct: 296 -------------ERDVHEVPIQP-ELVFA-------HVVDILNLDGRYLVKTLNEMVAV 334
Query: 352 AELLQEDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGK 411
+ ++EDK++ K + I + L +F Y + R+ KG
Sbjct: 335 GDSIREDKIEKGKPPRSY-IGRVGEFL--LFWLSLIGREDYLFLMSRD---------KG- 381
Query: 412 ASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL------NFPLRV-- 463
+L +P A+ F + V S I SGTL+P+++F + + FP V
Sbjct: 382 --LSLELVALDPSKALS-FVK-NVQSAIFMSGTLTPLEAFRDVMGIENAKLKKFPRMVKR 437
Query: 464 ENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFF 523
EN V+ +K + S+ S+E + + + IV +++P + +F
Sbjct: 438 ENAQVLVAKDV---------------STRGEERSMEVYKRMVDYIVEAVKLIPKNVGVFT 482
Query: 524 PSYYLMDQCIACWKNTSHGNLTTIWERICKH---KKPVVEPRQSSLFPLAIEDYMAKLKD 580
SY ++ ++ NL E K +K +++ L +AK K
Sbjct: 483 ASYEVLQGLLSA-------NLEVRLEGTGKAIFIEKQGATSQENDLL-------VAKFKA 528
Query: 581 TSTS-GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQ 639
+ GAV V G+ SEG D++ V++ G+P+A T P+V+ + Y + + +
Sbjct: 529 HARGKGAVLLGVMGGRNSEGQDYSGDEMNGVILVGIPYARPT-PRVQAQIRYFERKFPGK 587
Query: 640 GGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQIS 699
G Y Y A R + QA GRV R + G+II D R K +
Sbjct: 588 GRYYG------------YYLPAHRKLVQAAGRVHRSAEEKGSIIVLDYRLLWKGIKKDLP 635
Query: 700 LWIQPHIQCYSKFGDVVYTLTRFFRE 725
W++ ++ G + L RF+++
Sbjct: 636 DWMRETMRPVD-LGRMRLYLRRFWQQ 660
>gi|449482368|ref|XP_002193292.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Taeniopygia guttata]
Length = 913
Score = 146 bits (368), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 30/332 (9%)
Query: 415 TLSWWCFNPGIAMQEFSRL--EVGSIILTSGTLSPMDSFAQELKLNF---PLRVEN---P 466
+L + NP + F+++ E ++I+ GT+ P+ F ++L P R+
Sbjct: 582 SLKFLLLNPAV---HFAKVVEECRAVIIAGGTMQPVADFREQLLCRAGVDPARIVEFSCG 638
Query: 467 HVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSY 526
HVI + I I+ GPS L +Y+ RD + E G + N+ ++P G++ FFPSY
Sbjct: 639 HVIPPENILPIILCSGPSNQQLEFTYQTRDLPQMMDETGRILSNLCNVIPGGVVCFFPSY 698
Query: 527 YLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS---- 582
Q W+ T + R+ KK EP++++ + +Y +K S
Sbjct: 699 EYEKQVYGHWEKTG------LLSRLASKKKIFQEPKKANQVEQVLVEYAKCIKCCSQTGG 752
Query: 583 -TSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGG 641
+GA+ +V GK+SEG++F+D GR V++ GMP+ + P+++ K +LD G
Sbjct: 753 QMTGALLLSVVGGKMSEGINFSDDLGRCVIMVGMPYPNIRSPELQEKMTWLDKTMPRAAG 812
Query: 642 EYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLW 701
+ L +AVNQ++GR IRH+ D+ +I+ D R+ P+ +++ W
Sbjct: 813 QAPSRVL--------IENLCMKAVNQSIGRAIRHQKDFASILLLDHRYTRPAIFNKLPQW 864
Query: 702 IQPHIQCYSKFGDVVYTLTRFFREERICGSTN 733
I+ Q FG L + +C +T+
Sbjct: 865 IRERTQVKPAFGSAFAELRKVRTHRILCPATD 896
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 20/169 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + ++V LGSR+ LC++ EV L G+ Q N+ C
Sbjct: 212 IYYCSRTHSQLSQFVHEVQKSPFGKNIRLVSLGSRQNLCVNEEVRRL-GALQLINDRCME 270
Query: 153 LCKKGTNRRCNHHS-----RVADYM------KNNPHLGDEPI----DIEDLVNIGRTFGP 197
+ K ++ + + RV+ M + L DE + DIE LV++GR
Sbjct: 271 MQKNKHEKKSSEENEGKKRRVSRAMCPFYSFEQMQFLRDEVLVEVKDIEQLVSLGRETKA 330
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
CPY+ +R +V PY L+ R G++ K+ ++I DEAHNL
Sbjct: 331 CPYYGSRFAIPAAQLVVLPYQMLLHEPTRNAAGIKLKDQVVIIDEAHNL 379
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ Y Q +ME + +L+ + ESPTGTGK+L L+C L+W
Sbjct: 7 FPYTPYRIQEQFMEALYGALEAGRVGIFESPTGTGKSLSLICGALSW 53
>gi|157168345|ref|NP_001096787.1| TFIIH basal transcription factor complex helicase XPD subunit [Bos
taurus]
gi|182645388|sp|A6QLJ0.1|ERCC2_BOVIN RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|151556394|gb|AAI47983.1| ERCC2 protein [Bos taurus]
gi|296477395|tpg|DAA19510.1| TPA: TFIIH basal transcription factor complex helicase subunit [Bos
taurus]
Length = 760
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYRP- 121
++ ++Y SRT ++ +VI+EL+ S Y
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQ 97
Query: 122 ---KMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
K+ LG SR+ LCIH EV+ LR G + C L + S +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDVHGRQVPLPTGIYNLDDLKAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|240278769|gb|EER42275.1| DNA repair helicase RAD3 [Ajellomyces capsulatus H143]
Length = 773
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + LK L+ + +
Sbjct: 408 LHFTCLDAAIAIKPVFDRF--SSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSF 465
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 466 LPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFPSYLYMESIIS 525
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +W +K +VE S LA+E Y + + GAV V RG
Sbjct: 526 MWQGM--GILDLVW----NYKLILVETPDSQESSLALETY--RTACCNGRGAVLLCVARG 577
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 578 KVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD 630
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRVIR + DYG ++ D RF R++Q+ WI
Sbjct: 631 ------AMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRTQLPKWI 670
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 50/264 (18%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + +LE P+GTGKT+ LL +A+++ Q
Sbjct: 6 KTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQH-------------------------QP 40
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREVS 139
KL +Y SRT S++ + + ELK YR + + L SR+ LC+H V
Sbjct: 41 EQRKL---IYCSRTMSEIEKALAELKALMKYRAQQLGFAEDFRGLGLTSRKNLCLHPSVK 97
Query: 140 LLRGSAQNNA-CRFLC--------KKGTN-RRCNHHSRVADYMKNNPHLGDEPIDIEDLV 189
+ A +A CR L +KG + C +H + D ++ + + ++D+
Sbjct: 98 REKSGAVVDARCRSLTAGFVKEKKEKGEDVELCIYHENL-DLLEPSNLVPPGVFTLDDIT 156
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEG 248
G CPYF R + ++ Y+YL+DP + + E K+SI++FDEAHN++
Sbjct: 157 KYGEQHKQCPYFSVRRMMPFCKVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDN 216
Query: 249 ICADAASFDLSSGLLTACISEAKN 272
+C ++ S DL+ L A N
Sbjct: 217 VCIESLSIDLTEDSLRKASRGANN 240
>gi|84627555|gb|AAI11734.1| DDX11 protein [Homo sapiens]
Length = 906
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 154/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ +G S L +++ RD + E+G + N+ +V G++ FFPSY
Sbjct: 653 IPPDNILPLVICIGVSNQPLEFTFQKRDLPQMMDEVGRILCNLCSVVSGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + + KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGHLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGPV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 827 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAVQKFHREK 902
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + D+E L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYVERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|83405926|gb|AAI10523.1| ERCC2 protein [Homo sapiens]
Length = 682
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 351 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 408
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 409 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 468
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 469 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 520
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 521 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 567
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 568 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 623
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 106/272 (38%), Gaps = 106/272 (38%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKN 174
+ L SR+ LCIH E+ H+ V Y
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEIL-------------------------HANVVVY--- 129
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
+ H +P I DLV ++EL + +VF
Sbjct: 130 SYHYLLDP-KIADLV-------------SKELARKAVVVF-------------------- 155
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
DEAHN++ +C D+ S +L+ L C
Sbjct: 156 ------DEAHNIDNVCIDSMSVNLTRRTLDRC 181
>gi|403299023|ref|XP_003940292.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Saimiri boliviensis boliviensis]
Length = 704
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 151/296 (51%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 373 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 430
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 431 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 490
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 491 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 542
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + ++ L+F
Sbjct: 543 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDF----LTF 598
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 599 ---------DAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 645
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 106/272 (38%), Gaps = 106/272 (38%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 27 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 85
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 86 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 119
Query: 124 ---------VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKN 174
+ L SR+ LCIH E+ H+ V Y
Sbjct: 120 EGEKLPFLGLALSSRKNLCIHPEIL-------------------------HANVVVY--- 151
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
+ H +P I DLV ++EL + +VF
Sbjct: 152 SYHYLLDP-KIADLV-------------SKELARKAVVVF-------------------- 177
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
DEAHN++ +C D+ S +L+ L C
Sbjct: 178 ------DEAHNIDNVCIDSMSVNLTRRTLDRC 203
>gi|397493361|ref|XP_003817576.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Pan paniscus]
Length = 682
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 351 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 408
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 409 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 468
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 469 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 520
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 521 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 567
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 568 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 623
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 106/272 (38%), Gaps = 106/272 (38%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKN 174
+ L SR+ LCIH E+ H+ V Y
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEIL-------------------------HANVVVY--- 129
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
+ H +P I DLV ++EL + +VF
Sbjct: 130 SYHYLLDP-KIADLV-------------SKELARKAVVVF-------------------- 155
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
DEAHN++ +C D+ S +L+ L C
Sbjct: 156 ------DEAHNIDNVCIDSMSVNLTRRTLDRC 181
>gi|395854142|ref|XP_003799557.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Otolemur garnettii]
Length = 682
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 351 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 408
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + +R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 409 RVCLCPMIIGRGNDQVAISSKFESREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 468
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 469 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 520
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 521 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 567
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 568 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARVDKRGKLPRWIQEHL 623
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 107/272 (39%), Gaps = 106/272 (38%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIIAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKN 174
+ L SR+ LCIH E+ H+ V Y
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEIL-------------------------HANVVVY--- 129
Query: 175 NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK 234
+ H +P I DLV ++EL + +VF
Sbjct: 130 SYHYLLDP-KIADLV-------------SKELARKAVVVF-------------------- 155
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
DEAHN++ +C D+ S +L+ +L C
Sbjct: 156 ------DEAHNIDNVCIDSMSVNLTRRILDRC 181
>gi|346986337|ref|NP_001231320.1| TFIIH basal transcription factor complex helicase XPD subunit
[Cricetulus griseus]
gi|2495145|sp|Q60452.1|ERCC2_CRIGR RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|604908|gb|AAC13749.1| nucleotide excision repair protein [Cricetulus griseus]
Length = 760
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 144/307 (46%), Gaps = 52/307 (16%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAF- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYR-- 120
++ ++Y SRT ++ +VI+EL+ S Y
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQ 97
Query: 121 --PKMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
K+ LG SR+ LCIH EV+ LR G + C L + + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +G+ G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGRQVPLPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE----AKNCIDISSTR 280
+ E + ++++FDEAHN++ +C D+ S +L+ L C S K + I T
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETD 277
Query: 281 RGQSSDE 287
+ DE
Sbjct: 278 EQRLRDE 284
>gi|119936449|gb|ABM06129.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 protein [Bos taurus]
Length = 773
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 442 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 499
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 500 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 559
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 560 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 611
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 612 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 658
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 659 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 714
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 18 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 76
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYRP- 121
++ ++Y SRT ++ +VI+EL+ S Y
Sbjct: 77 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQ 110
Query: 122 ---KMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
K+ LG SR+ LCIH EV+ LR G + C L + S +
Sbjct: 111 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRF 170
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 171 YEEFDVHGRQVPLPTGIYNLDDLKAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 230
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 231 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 272
>gi|159467054|ref|XP_001691713.1| hypothetical protein CHLREDRAFT_100548 [Chlamydomonas reinhardtii]
gi|158279059|gb|EDP04821.1| predicted protein [Chlamydomonas reinhardtii]
Length = 341
Score = 145 bits (367), Expect = 9e-32, Method: Composition-based stats.
Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 26/290 (8%)
Query: 420 CFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGI 478
C + +AM+ FS+ + ++++TSGTLSP+D + + L N P+ +++ + ++ +
Sbjct: 39 CLDASLAMRPVFSKFQ--TVVITSGTLSPIDLYPRILNFN-PVAIQSFQMTLTRDCLCPV 95
Query: 479 VPV-GPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
V G L++ + R + G +V +A VPDG++ FF SY MDQ I+ W
Sbjct: 96 VVTRGADQMPLSTKFEMRSDPGVMRNYGRLLVELAATVPDGIVAFFVSYRYMDQIISKWH 155
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVS 597
+ I + I +HK +E + LA++++ + S GAVF +V RGKV+
Sbjct: 156 DMG------ILQEIMQHKLIFIETQDVVETTLALDNF--RRACDSGRGAVFLSVARGKVA 207
Query: 598 EGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWY 657
EG+DF H GRAVV+ G+P+ +R + EYL Q + +Y L+F
Sbjct: 208 EGIDFDRHYGRAVVMFGVPYQYTLSRILRARLEYLRETFQIKEADY----LAF------- 256
Query: 658 NQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRVIR + DYG +IF D+R+ ++ ++ WI H++
Sbjct: 257 --DAVRQAAQCVGRVIRSKADYGMMIFADKRYQRHDKRDKLPQWITRHLR 304
>gi|338710190|ref|XP_001500524.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Equus caballus]
Length = 785
Score = 145 bits (367), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 454 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 511
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 512 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 571
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 572 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 623
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 624 VARGKVSEGIDFVHHYGRAVLMFGVPYVYTQSRILKARLEYLRDQFQ------------- 670
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG +IF D+RFA ++ ++ WIQ H+
Sbjct: 671 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADKRFARADKRGKLPRWIQEHL 726
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 136/286 (47%), Gaps = 56/286 (19%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 33 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 91
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 92 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 125
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNH-------HS 166
+ L SR+ LCIH EV+ LR G + C L + R H H
Sbjct: 126 EGEKLQFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLT--ASYVRAQHQQDASLPHC 183
Query: 167 RVADYMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLI 221
R Y + + H P+ +++DL +GR G CPYF+ R ++V Y+YL+
Sbjct: 184 RF--YEEFDTHGRQVPLPSGIYNLDDLKAVGRRQGWCPYFLARYSILHANVVVYSYHYLL 241
Query: 222 DPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
DP + E + ++++FDEAHN++ +C D+ S ++ L C
Sbjct: 242 DPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVTITRRTLDRC 287
>gi|296234099|ref|XP_002762284.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Callithrix jacchus]
Length = 760
Score = 145 bits (367), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSHILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDTHGREVPLPPGIYNLDDLKALGRHQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|325090321|gb|EGC43631.1| DNA repair helicase RAD3 [Ajellomyces capsulatus H88]
Length = 797
Score = 145 bits (367), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + LK L+ + +
Sbjct: 432 LHFTCLDAAIAIKPVFDRF--SSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSF 489
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 490 LPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFPSYLYMESIIS 549
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +W +K +VE S LA+E Y + + GAV V RG
Sbjct: 550 MWQGM--GILDLVW----NYKLILVETPDSQESSLALETY--RTACCNGRGAVLLCVARG 601
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 602 KVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFL-------RENYRIRENDFLSFD 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRVIR + DYG ++ D RF R++Q+ WI
Sbjct: 655 ------AMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRTQLPKWI 694
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 51/291 (17%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q KL +Y SRT S++ + + ELK YR
Sbjct: 63 -------------------------QPEQRKL---IYCSRTMSEIEKALAELKALMKYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLRGSAQNNA-CRFLC--------KKGTN-RRC 162
+ + L SR+ LC+H V + A +A CR L +KG + C
Sbjct: 95 QQLGFAEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKEKKEKGEDVELC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + ++D+ G CPYF R + ++ Y+YL+D
Sbjct: 155 IYHENL-DLLEPSNLVPPGVFTLDDITKYGEQHKQCPYFSVRRMMPFCKVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
P + + E K+SI++FDEAHN++ +C ++ S DL+ L A N
Sbjct: 214 PKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGANN 264
>gi|149029745|gb|EDL84902.1| rCG63103 [Rattus norvegicus]
Length = 396
Score = 145 bits (367), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 150/310 (48%), Gaps = 25/310 (8%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQEL------KLNFPLRVENPHV 468
+L + NP + + + E ++++ GT+ P+ F ++L + + + HV
Sbjct: 93 SLKFLLLNPAVHFAQVVK-ECRALVIAGGTMQPVSDFREQLLACSGVEASRVVEFSCGHV 151
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I I+ GPS L +Y+ R+ + +E G + N+ +VP G++ F PSY
Sbjct: 152 IPPDNILPLIICSGPSNQQLEFTYQRRELPQMMEETGRILCNLCNVVPGGMVCFLPSYEY 211
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS---- 584
+ Q A W T + R+ KK EP+++S + Y + S S
Sbjct: 212 LRQVHAHWDKTG------LLARLSVRKKIFQEPKRASQVEQVLTAYSTCIASCSHSEGHL 265
Query: 585 -GAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
GA+ +V GK+SEG++F+D GR VV+ GMP+ + P+++ K YLD G+
Sbjct: 266 TGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLDQTIPRTHGQP 325
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G +A+NQ++GR IRH+ D+ +I+ D R+A PS +++ WI+
Sbjct: 326 P-------PGTVLIENLCMKAINQSIGRAIRHQKDFASIVLLDHRYARPSILAKLPAWIR 378
Query: 704 PHIQCYSKFG 713
++ + FG
Sbjct: 379 DRVEVKATFG 388
>gi|225560307|gb|EEH08589.1| DNA repair helicase RAD3 [Ajellomyces capsulatus G186AR]
Length = 797
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + LK L+ + +
Sbjct: 432 LHFTCLDAAIAIKPVFDRF--SSVIVTSGTLSPLEMYPKMLKFTTVLQESYTMTLARRSF 489
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 490 LPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGVVVFFPSYLYMESIIS 549
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +W +K +VE S LA+E Y + + GAV V RG
Sbjct: 550 MWQGM--GILDLVW----NYKLILVETPDSQESSLALETY--RTACCNGRGAVLLCVARG 601
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 602 KVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRVIR + DYG ++ D RF R++Q+ WI
Sbjct: 655 ------AMRHAAQCLGRVIRGKDDYGVMVLADRRFQ--KRRTQLPKWI 694
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 51/291 (17%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q KL +Y SRT S++ + + ELK YR
Sbjct: 63 -------------------------QPEQRKL---IYCSRTMSEIEKALAELKALMKYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLRGSAQNNA-CRFLC---------KKGTNRRC 162
+ + L SR+ LC+H V + A +A CR L K G C
Sbjct: 95 QQLGFVEDFRGLGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKEKKEKGGDVELC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + ++D+ G CPYF R + ++ Y+YL+D
Sbjct: 155 IYHENL-DLLEPSNLVPPGVFTLDDITKYGEQHKQCPYFSVRRMMPFCKVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
P + + E K+SI++FDEAHN++ +C ++ S DL+ L A N
Sbjct: 214 PKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGANN 264
>gi|21322260|gb|AAM45142.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D) [Homo
sapiens]
Length = 736
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 405 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 462
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 463 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 522
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 523 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 574
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 575 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 621
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 622 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 677
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 126/262 (48%), Gaps = 47/262 (17%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 1 MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY--------------------- 39
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM---------VILGSREQLCI 134
++ ++Y SRT ++ +VI+EL K N+ K + L SR+ LCI
Sbjct: 40 ------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCI 93
Query: 135 HREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD---YMKNNPHLGDEPI-----DI 185
H EV+ LR G + C L + H + + Y + + H + P+ ++
Sbjct: 94 HPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNL 153
Query: 186 EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAH 244
+DL +GR G CPYF+ R ++V Y+YL+DP + E + ++++FDEAH
Sbjct: 154 DDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAH 213
Query: 245 NLEGICADAASFDLSSGLLTAC 266
N++ +C D+ S +L+ L C
Sbjct: 214 NIDNVCIDSMSVNLTRRTLDRC 235
>gi|440803958|gb|ELR24841.1| DEAD/H (AspGlu-Ala-Asp/His) box polypeptide 11, putative
[Acanthamoeba castellanii str. Neff]
Length = 1005
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 154/330 (46%), Gaps = 49/330 (14%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDS-----FAQELKLNFPLR------- 462
+L + NP +E E +++L GT+ P+ F E ++ P++
Sbjct: 628 SLKFILLNPAKHFREVV-AEARAVVLAGGTMHPIPDLVFQLFGPEAEVPEPIKPKLVGLR 686
Query: 463 -VENPHVITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLI 521
HVITS+ + V GPS + +++NR S +ELG ++N+ +VPDG+++
Sbjct: 687 SFSCGHVITSESLLTLCVGSGPSDVPFDFAWQNRSSAAMIEELGRLVLNMCNLVPDGVVM 746
Query: 522 FFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYM------ 575
FFPSY+ Q I+ W+ + G L I R KK + EPR +S+ +E+Y
Sbjct: 747 FFPSYHYEQQVISTWETS--GMLAKINAR----KKVLREPRAASMIGQVLEEYKDAIDAN 800
Query: 576 -----AKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKRE 630
A + GA+ AV GK+SEG++F+D GR VV+ G+P+ DP + K +
Sbjct: 801 FTPTGAAASTSRQRGAILSAVVGGKMSEGINFSDGLGRCVVMVGLPYPNPRDPVLVEKMK 860
Query: 631 YLDLQAQSQGGEY------------------KETKLSFLSGEDWYNQQASRAVNQAVGRV 672
Y+ +A + + +S +Y RAVNQ++GR
Sbjct: 861 YISAKAAAAAASTSSSSSSSSSWSSSSSPARRAMSAPVMSARQYYENACMRAVNQSIGRS 920
Query: 673 IRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
IRH DY I+ D R+ P S++ WI
Sbjct: 921 IRHAGDYATILLVDHRYMRPEITSKLPRWI 950
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEA 243
DIE+LV +G CPY+ TR +V++V PYN L+ R+ LGV+ K +I++ DEA
Sbjct: 369 DIEELVQLGEKQRACPYYGTRAAVPSVEVVALPYNMLLHRATRESLGVDLKGNIVVVDEA 428
Query: 244 HNL 246
HNL
Sbjct: 429 HNL 431
>gi|410982712|ref|XP_003997692.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Felis catus]
Length = 760
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 52/284 (18%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K ++ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLHFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNH-----HSRV 168
+ L SR+ LCIH EV LR G + C L + H R
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVMPLRFGKDVDGKCHSLTASYVRAQYQQDPSLPHCRF 157
Query: 169 ADYMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDP 223
Y + + H P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 --YEEFDVHGRQVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDP 215
Query: 224 WFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ + E + ++++FDEAHN++ +C D+ S +++ L C
Sbjct: 216 KIAELVSKELARKAVVVFDEAHNIDNVCIDSMSVNITRRTLDRC 259
>gi|15834617|ref|NP_000391.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Homo sapiens]
gi|119540|sp|P18074.1|ERCC2_HUMAN RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=Basic transcription factor 2 80
kDa subunit; Short=BTF2 p80; AltName: Full=CXPD;
AltName: Full=DNA excision repair protein ERCC-2;
AltName: Full=DNA repair protein complementing XP-D
cells; AltName: Full=TFIIH basal transcription factor
complex 80 kDa subunit; Short=TFIIH 80 kDa subunit;
Short=TFIIH p80; AltName: Full=Xeroderma pigmentosum
group D-complementing protein
gi|17939382|gb|AAL48323.1| ERCC2 [Homo sapiens]
gi|82568960|gb|AAI08256.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
Length = 760
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|380799421|gb|AFE71586.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1, partial [Macaca mulatta]
Length = 771
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 440 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 497
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 498 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 557
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 558 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 609
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 610 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 656
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 657 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 712
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 16 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 74
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 75 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 108
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H + +
Sbjct: 109 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRF 168
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 169 YEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 228
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 229 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 270
>gi|426389184|ref|XP_004061004.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Gorilla gorilla gorilla]
gi|83405523|gb|AAI10524.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
gi|119577745|gb|EAW57341.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D),
isoform CRA_a [Homo sapiens]
gi|383416479|gb|AFH31453.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Macaca mulatta]
Length = 760
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|289802977|ref|NP_001166280.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Rattus norvegicus]
gi|149056774|gb|EDM08205.1| rCG54110 [Rattus norvegicus]
Length = 760
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + +A++ F R + S+I+TSGTLSP+D + + L + + +
Sbjct: 433 LHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+ +A
Sbjct: 491 CPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVA 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W I E I ++K +E + + +A+E Y ++ GA+ +V RG
Sbjct: 551 SWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLSVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q +
Sbjct: 603 KVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ-------------IREN 649
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 650 DFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 144/307 (46%), Gaps = 52/307 (16%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYR-- 120
++ ++Y SRT ++ +VI+EL+ S Y
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQ 97
Query: 121 --PKMVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
K+ LG SR+ LCIH EV+ LR G + C L + + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +G+ G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDTHGRQVPLPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE----AKNCIDISSTR 280
+ E + ++++FDEAHN++ +C D+ S +L+ L C S K + I T
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETD 277
Query: 281 RGQSSDE 287
+ DE
Sbjct: 278 EQRLRDE 284
>gi|402905923|ref|XP_003915757.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Papio anubis]
Length = 760
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|307686333|dbj|BAJ21097.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [synthetic construct]
Length = 760
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|291414826|ref|XP_002723661.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 2 protein [Oryctolagus
cuniculus]
Length = 713
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 152/296 (51%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 382 ANPVLHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 439
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ IV G ++S + +R+ + + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 440 RVCLCPMIVGRGNDQVAISSKFESREDMAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 499
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 500 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 551
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + ++ L+F
Sbjct: 552 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDF----LTF 607
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 608 ---------DAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 654
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 126 LGSREQLCIHREVSLLR-GSAQNNACRFLC---------KKGTNRRCNHHSRVADYMKNN 175
L SR+ LCIH EV+ LR G + C L + + C + + +
Sbjct: 62 LSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYIRAQYQQDASRPHCRFYEEFDAHGRQV 121
Query: 176 PHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-K 234
P L +++DL +G+ G CPYF+ R ++V Y+YL+DP + E +
Sbjct: 122 P-LPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELAR 180
Query: 235 NSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 181 KAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 212
>gi|403299021|ref|XP_003940291.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Saimiri boliviensis boliviensis]
Length = 782
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 151/296 (51%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 451 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 508
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 509 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 568
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 569 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 620
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + ++ L+F
Sbjct: 621 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDF----LTF 676
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 677 ---------DAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 723
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 27 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 85
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 86 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 119
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H + +
Sbjct: 120 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRF 179
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 180 YEEFDTHGREVPLPPGIYNLDDLKALGRHHGWCPYFLARYSILHANVVVYSYHYLLDPKI 239
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 240 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 281
>gi|355703655|gb|EHH30146.1| hypothetical protein EGK_10751 [Macaca mulatta]
Length = 760
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|395854140|ref|XP_003799556.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Otolemur garnettii]
Length = 760
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + +R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFESREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARVDKRGKLPRWIQEHL 701
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 136/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIIAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDTSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGRQVPLPAGIYNLDDLKTLGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ +L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRILDRC 259
>gi|350538411|ref|NP_001233519.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
gi|397493359|ref|XP_003817575.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Pan paniscus]
gi|343958692|dbj|BAK63201.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
Length = 760
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H S +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDSSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|302689377|ref|XP_003034368.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune H4-8]
gi|300108063|gb|EFI99465.1| hypothetical protein SCHCODRAFT_53201 [Schizophyllum commune H4-8]
Length = 869
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 156/303 (51%), Gaps = 20/303 (6%)
Query: 434 EVGSIILTSGTLSPM-DSFAQELKLNFPLRVEN---PHVITSKQIWAGIVPVGPSGYLLN 489
E +++L GT+SPM D F Q R+ + H+I S + +V GP G L
Sbjct: 570 EARAVVLAGGTMSPMSDVFNQLFSHVAAERLTSFSCGHIIPSSNLQTLVVTKGPKGGPLE 629
Query: 490 -SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIW 548
+ R +D + +ELG + N+ + P G+++FFPSY ++ A W + G L
Sbjct: 630 FKAERQKDPVAI-EELGQILFNLVCVTPKGMVVFFPSYSFLNAAKAAWGQS--GALG--- 683
Query: 549 ERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTS----GAVFFAVCRGKVSEGLDFAD 604
R+ KK EP +++ ++ Y + + S GA+ FAV K+SEGL+FAD
Sbjct: 684 -RLEGRKKIFFEPEETTDVDKVLQSYATAVHEVDPSRPKPGALLFAVIGAKLSEGLNFAD 742
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREY---LDLQAQSQGGEYKETKLSFLSGEDWYNQQA 661
R+VVI GMP+A + +++ + Y L+ + +G + +E K + + + Y
Sbjct: 743 DLARSVVIVGMPYANLGSAELKERMAYVKRLEERRIREGKQVRE-KGAKDAAAELYENMC 801
Query: 662 SRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGDVVYTLTR 721
AVNQ++GR IRH+ D+ A++ D R+A+ + ++++ WI + +G V+ L
Sbjct: 802 MNAVNQSIGRAIRHQGDWAALVLLDRRYANVAIRNKLPKWIGSGLTVADTYGMVIKELAT 861
Query: 722 FFR 724
F+R
Sbjct: 862 FYR 864
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLP--TILYTSRTHSQLRQVIQELKTSNYR-- 120
SF+ V +I S+++ ++ + L I Y SRTHSQL QV+ EL+ + R
Sbjct: 172 SFAGATEHVTPRIEASRNTSRITEEDEEALKCTKIYYASRTHSQLSQVLPELRRVDERRA 231
Query: 121 -------------------PKMVILGSREQLCIHREVSLLRGSA--QNNACRFLCKKGTN 159
+ V LGSR+QLCI+ +LL+G + ACR + +
Sbjct: 232 SCSGKRAREEDDEVRYYTTTRAVALGSRKQLCIND--TLLKGKRVDLDEACRAMLAEKKE 289
Query: 160 RRCNH---HSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAP 216
+RC H A + + P DIE+L GR G CPYF +R+ ++V P
Sbjct: 290 KRCPHLPSQEEEAAMLDLRDQILATPKDIEELAATGRASGICPYFGSRKAIDQAELVTLP 349
Query: 217 YNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
YN L R+ LG++ K+ I++ DEAHN+
Sbjct: 350 YNLLFQRSAREALGIDLKDQIVVIDEAHNV 379
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 13 FPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
FP+ + Y QL M + + L++K +++ESPTGTGKTL LL A+L W
Sbjct: 20 FPYPQPYQIQLDLMRHLYEVLESKKISIVESPTGTGKTLSLLTASLTW 67
>gi|296645|emb|CAA36463.1| ercc2 gene product [Homo sapiens]
Length = 730
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 701
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + H + +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H + P+ +++DL +GR G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 218 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 259
>gi|194754721|ref|XP_001959643.1| GF11940 [Drosophila ananassae]
gi|190620941|gb|EDV36465.1| GF11940 [Drosophila ananassae]
Length = 770
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 151/292 (51%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IAM FSR + ++++TSGTLSPMD + + L + + + +
Sbjct: 432 LHFSCLDSSIAMAPVFSRFQ--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCL 489
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S + R+ + G +V +A+ VPDG++ FF SY ++ +A
Sbjct: 490 LPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVA 549
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + I + + ++K +E + ++ A+ +Y+ K D GAV AV RG
Sbjct: 550 SWYDQG------IVDTLLRYKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARG 601
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + +YL Q Q + ++ L+F
Sbjct: 602 KVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---- 653
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR +R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 654 -----DAMRHAAQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHL 700
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 48/275 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ +SL K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-------- 116
V ++ + ++Y SRT ++ +VI EL+
Sbjct: 60 ------------------MVEYPET----VRKLIYCSRTVPEIEKVIAELQNLMAYYERN 97
Query: 117 -SNYRP-KMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADY 171
N P ++L SR+ +CIH EVS R G A + C L R + + + Y
Sbjct: 98 CPNPPPFTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRDRHEMDSETPICQY 157
Query: 172 MKNNPHLGDE---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E P+ I+DL GR+ CPYF+ R IV Y+YL+DP
Sbjct: 158 YEGFTLEGKESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS 259
+ + E + S ++FDEAHN++ +C D+ S ++
Sbjct: 218 AQVVSKEMTRESCVVFDEAHNIDNVCIDSMSVKIN 252
>gi|410212712|gb|JAA03575.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ F Q+L + E+ HV
Sbjct: 594 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSDFRQQLLACAGVEAEHVVEFSCGHV 652
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ R+ + E+G + N+ +V G++ FFPSY
Sbjct: 653 IPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVSGGVVCFFPSYEY 712
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y ++
Sbjct: 713 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQV 766
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 767 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 826
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 827 P-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 879
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
++ + FG + + +F RE+
Sbjct: 880 ARVEVKATFGPAIAAMQKFHREK 902
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q N+ C
Sbjct: 229 IYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSL-GSVQLINDRCVD 287
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + DIE L+ +G+
Sbjct: 288 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDIEQLLALGKEA 347
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 348 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHS 407
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 408 VEVSGSQLCQAHSQLLQYMEQYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 459
Query: 316 KE 317
K+
Sbjct: 460 KQ 461
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 3 TYKIRGIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
T K+ I FPF Y Q +M ++ + L+ + ESPTGTGK+L L+C L+W
Sbjct: 5 TQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSW 61
>gi|392870657|gb|EAS32475.2| DNA repair helicase rad15 [Coccidioides immitis RS]
Length = 795
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 26/293 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + IA++ F R GS+I+TSGTLSP++ + + L L+ + +
Sbjct: 431 VLHFTCLDAAIAIKPVFERF--GSVIITSGTLSPLEMYPKMLGFQTVLQESYSMTLARRS 488
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
IV G ++S+++ R+ + GN ++ +RI PDG+++FFPSY M+ I
Sbjct: 489 FLPMIVTRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESII 548
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W+ G L +IW +K +VE S LA+E Y + + GA+ V R
Sbjct: 549 SMWQGM--GILDSIW----NYKLILVETPDSQESSLALETY--RTACCNGRGAILLCVAR 600
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV+ G+PF P ++ + ++ Y+ + FLS
Sbjct: 601 GKVSEGIDFDHHYGRAVLCIGVPFQYTESPILKARLRFM-------LENYRIREDDFLSF 653
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ A R Q +GRV+R + DYG ++ D RF +++Q+ WI +I
Sbjct: 654 D------AMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRNQLPKWISQNI 698
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 55/293 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q Y+ + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
S L +Y SRT S++ + + EL+
Sbjct: 63 YPSHRKL----------------------------IYCSRTMSEIEKALTELRELMKYRE 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR-------- 161
T ++R + L SR+ LC+H V + G+ + CR L R
Sbjct: 95 QQLGYTEDFRA--LGLTSRKNLCLHPSVRREKSGTVVDARCRSLTASFVKERKEKGEDVE 152
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ + + ++ L+ G CPYF R + +++ Y+YL
Sbjct: 153 LCLYHENL-DLLEPSNLVPPGVFTLDGLIRYGEQHKQCPYFSARRMMPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+DP + + E K+ I++FDEAHN++ +C ++ S D++ L A N
Sbjct: 212 LDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKAGRGANN 264
>gi|195170160|ref|XP_002025881.1| GL10160 [Drosophila persimilis]
gi|198461162|ref|XP_002138963.1| GA25100 [Drosophila pseudoobscura pseudoobscura]
gi|194110745|gb|EDW32788.1| GL10160 [Drosophila persimilis]
gi|198137256|gb|EDY69521.1| GA25100 [Drosophila pseudoobscura pseudoobscura]
Length = 769
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 151/292 (51%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IAM FSR + ++++TSGTLSPMD + + L + + + +
Sbjct: 433 LHFSCLDSSIAMAPVFSRFQ--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCL 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S + R+ + G +V +A+ VPDG++ FF SY ++ +A
Sbjct: 491 LPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGVVCFFTSYLYLESVVA 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + I + + ++K +E + ++ A+ +Y+ K D GAV AV RG
Sbjct: 551 SWYDQG------IVDTLLRYKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + +YL Q Q + ++ L+F
Sbjct: 603 KVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---- 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR +R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 655 -----DAMRHAAQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHL 701
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 48/275 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP+E Y Q YM ++ ++L K + LLE P+GTGKT LL +A+
Sbjct: 5 IDGLLVYFPYEYIYPEQYAYMLELKRTLDAKGHCLLEMPSGTGKTATLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYR---- 120
I ++ + ++Y SRT ++ +VI EL+
Sbjct: 60 -----------MIEHPET-----------IRKLIYCSRTVPEIEKVIAELQNLMVYYERE 97
Query: 121 ----PKM--VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADY 171
P M ++L SR+ LCIH EVS R G A + C L + + + + Y
Sbjct: 98 CVKPPAMTGLVLSSRKNLCIHPEVSKEREGKAVDGKCYGLTASYIRDKHELDTDTPICQY 157
Query: 172 MKNNPHLGDE---PIDI---EDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E PI I +DL GR+ CPYF+ R IV Y+YL+DP
Sbjct: 158 FEGFSLEGKESTLPIGIYSLDDLKEYGRSRNWCPYFLARYAISHAQIVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLS 259
+ + E + S ++FDEAHN++ +C D+ S ++
Sbjct: 218 AQVVSKEMTRESCVVFDEAHNIDNVCIDSMSVKIN 252
>gi|303317606|ref|XP_003068805.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108486|gb|EER26660.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038802|gb|EFW20737.1| DNA repair helicase RAD3 [Coccidioides posadasii str. Silveira]
Length = 795
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 26/293 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + IA++ F R GS+I+TSGTLSP++ + + L L+ + +
Sbjct: 431 VLHFTCLDAAIAIKPVFERF--GSVIITSGTLSPLEMYPKMLGFQTVLQESYSMTLARRS 488
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
IV G ++S+++ R+ + GN ++ +RI PDG+++FFPSY M+ I
Sbjct: 489 FLPMIVTRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESII 548
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W+ G L +IW +K +VE S LA+E Y + + GA+ V R
Sbjct: 549 SMWQGM--GILDSIW----NYKLILVETPDSQESSLALETY--RTACCNGRGAILLCVAR 600
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV+ G+PF P ++ + ++ Y+ + FLS
Sbjct: 601 GKVSEGIDFDHHYGRAVLCIGVPFQYTESPILKARLRFM-------LENYRIREDDFLSF 653
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ A R Q +GRV+R + DYG ++ D RF +++Q+ WI +I
Sbjct: 654 D------AMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRNQLPKWISQNI 698
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 55/293 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q Y+ + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
S L +Y SRT S++ + + EL+
Sbjct: 63 YPSHRKL----------------------------IYCSRTMSEIEKALTELRELMKYRE 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR-------- 161
T ++R + L SR+ LC+H V + G+ + CR L R
Sbjct: 95 QQLGYTEDFRA--LGLTSRKNLCLHPSVRREKSGTVVDARCRSLTASFVKERKEKGEDVE 152
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ + + ++ L+ G CPYF R + +++ Y+YL
Sbjct: 153 LCLYHENL-DLLEPSNLVPPGVFTLDGLIRYGEQHKQCPYFSARRMMPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+DP + + E K+ I++FDEAHN++ +C ++ S D++ L A N
Sbjct: 212 LDPKIAERVSKELSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKAGRGANN 264
>gi|126340221|ref|XP_001373024.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Monodelphis domestica]
Length = 902
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 158/323 (48%), Gaps = 30/323 (9%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
+L + NP + + + E ++I+ GT+ P+ F ++L + E HV
Sbjct: 595 SLRFLLLNPSVHFAQVVK-ECRAVIIAGGTMQPVADFREQLLECAGVGTERVVEFSCGHV 653
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ GPS L Y+ RD + E+G + N+ +VP G++ FFPSY
Sbjct: 654 IPPDNILPIVLCSGPSNQPLEFIYQKRDLPQLMDEIGRILCNLCNVVPGGVVCFFPSYDY 713
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ + A W + G LT R+ KK EP +++ + +Y +K S
Sbjct: 714 LHKVQAHWAQS--GLLT----RLTVKKKIFQEPSRANQVEQVLTEYSKCIKRCSQVRGVM 767
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D GR VV+ GMP+ + +++ K YLD Q++
Sbjct: 768 TGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSLELQEKMAYLD---QTRPNS- 823
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRHR D+ +I+ D+R++ P +++ WI+
Sbjct: 824 --------PGKSLIENLCMKAVNQSIGRAIRHRQDFASILLLDQRYSRPYILAKLPGWIR 875
Query: 704 PHIQCYSKFGDVVYTLTRFFREE 726
+ + FG L +F RE+
Sbjct: 876 DQVSIKATFGPAFAALRKFHREK 898
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY--RPKMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I Y SRTHSQL Q + E++ S + +++ LGSR+ LC++ EV L GS N+ C
Sbjct: 227 IYYCSRTHSQLTQFVHEVQKSPFGKETRLISLGSRQNLCVNEEVKRL-GSVHLINDRCLE 285
Query: 153 L-------------CKKGTNRRCNHHSRVADYMKNNPHLGDEPI----DIEDLVNIGRTF 195
+ K + N S + L DE + DIE LV +G+
Sbjct: 286 MQKNKHGKKKNKEEEKAKKRKLENRMSCPFYNYEQMQFLRDEVLMEVKDIEQLVVLGKEA 345
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R + +V PY L+ R+ G++ + ++I DEAHNL S
Sbjct: 346 RACPYYGSRFAIPSAQLVVLPYQMLLHAATRQAAGIKLQGQVVIIDEAHNLIDTITSIHS 405
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L C + ++ + R+ L N ++ +L LEK + + N
Sbjct: 406 AEVSG--LQLCQAHSQLSQYMERYRK------LLKAKNLMYIKQILYLLEKFVTVLGGNV 457
Query: 316 KE 317
K+
Sbjct: 458 KQ 459
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 8 GIDVEFPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
GI FP+ Y Q +M ++ L+ + ESPTGTGK+L L+C L+W +
Sbjct: 9 GIHFPFPYTPYSIQKDFMTELYHVLEAGKIGIFESPTGTGKSLSLICGALSWLRDF 64
>gi|432108806|gb|ELK33414.1| TFIIH basal transcription factor complex helicase XPD subunit,
partial [Myotis davidii]
Length = 600
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + +A++ F R + S+I+TSGTLSP+D + + L + + +
Sbjct: 273 LHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL 330
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+ +A
Sbjct: 331 CPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVA 390
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W I E I ++K +E + + +A+E Y ++ GA+ +V RG
Sbjct: 391 SWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLSVARG 442
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q +
Sbjct: 443 KVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ-------------IREN 489
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 490 DFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 541
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDE 242
+++DL +GR G CPYF+ R ++V Y+YL+DP + E + ++++FDE
Sbjct: 117 NLDDLKAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDE 176
Query: 243 AHNLEGICADAASFDLSSGLLTAC 266
AHN++ +C D+ S +L+ L C
Sbjct: 177 AHNIDNVCIDSMSVNLTRRTLDRC 200
>gi|119495148|ref|XP_001264365.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
gi|119412527|gb|EAW22468.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
Length = 794
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 30/291 (10%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--S 471
L + C + IA++ F R S+I+TSGTLSP++ + + L FP ++ + +T
Sbjct: 431 VLHFTCLDAAIAIKPVFDRF--SSVIITSGTLSPLEMYPK--MLGFPTVLQESYTMTLAR 486
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+
Sbjct: 487 RSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMES 546
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
I+ W+ G L +IW +K +VE S LA+E Y + + GA+ F V
Sbjct: 547 IISMWQGM--GILDSIW----NYKLILVETPDSQESSLALETY--RTACCNGRGAILFCV 598
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
RGKVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FL
Sbjct: 599 ARGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLR-------ENYRIRENDFL 651
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
S + A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 652 SFD------AMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRNQLPKWI 694
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 55/293 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FMIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
L +Y SRT S++ + + ELK
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKELMKFRT 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR-------- 161
T ++R + L SR+ LC+H V + G+ + CR L +
Sbjct: 95 QQLGYTEDFRA--LGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEKKERGEDVE 152
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ + + ++ L+ G CPYF R + +++ Y+YL
Sbjct: 153 LCVYHENL-DLLEPHNLVPPGVFTLDGLLKYGEEHKQCPYFSARRMMPYCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+DP + + E K+ I++FDEAHN++ +C +A S D++ L A N
Sbjct: 212 LDPKIAERVSRELSKDCIVVFDEAHNIDNVCIEALSIDITEDSLRKATRGANN 264
>gi|119186659|ref|XP_001243936.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 757
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 26/293 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + IA++ F R GS+I+TSGTLSP++ + + L L+ + +
Sbjct: 393 VLHFTCLDAAIAIKPVFERF--GSVIITSGTLSPLEMYPKMLGFQTVLQESYSMTLARRS 450
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
IV G ++S+++ R+ + GN ++ +RI PDG+++FFPSY M+ I
Sbjct: 451 FLPMIVTRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESII 510
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W+ G L +IW +K +VE S LA+E Y + + GA+ V R
Sbjct: 511 SMWQGM--GILDSIW----NYKLILVETPDSQESSLALETY--RTACCNGRGAILLCVAR 562
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV+ G+PF P ++ + ++ Y+ + FLS
Sbjct: 563 GKVSEGIDFDHHYGRAVLCIGVPFQYTESPILKARLRFM-------LENYRIREDDFLSF 615
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ A R Q +GRV+R + DYG ++ D RF +++Q+ WI +I
Sbjct: 616 D------AMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRNQLPKWISQNI 660
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 73/283 (25%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q Y+ + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
S L +Y SRT S++ + + EL+
Sbjct: 63 YPSHRKL----------------------------IYCSRTMSEIEKALTELRELMKYRE 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVAD 170
T ++R + L SR+ LC+H V + N L G
Sbjct: 95 QQLGYTEDFRA--LGLTSRKNLCLHPSVRREKSEPSN-----LVPPGV------------ 135
Query: 171 YMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLG 230
++ L+ G CPYF R + +++ Y+YL+DP + +
Sbjct: 136 ------------FTLDGLIRYGEQHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVS 183
Query: 231 VEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
E K+ I++FDEAHN++ +C ++ S D++ L A N
Sbjct: 184 KELSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKAGRGANN 226
>gi|38455510|gb|AAR20853.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 151/292 (51%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IAM FSR + ++++TSGTLSPMD + + L + + + +
Sbjct: 349 LHFSCLDSSIAMAPVFSRFQ--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCL 406
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S + R+ + G +V +A+ VPDG++ FF SY ++ +A
Sbjct: 407 LPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFTSYLYLESVVA 466
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + I + + ++K +E + ++ A+ +Y+ K D GAV AV RG
Sbjct: 467 SWYDQG------IVDTLLRYKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARG 518
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + +YL Q Q + ++ L+F
Sbjct: 519 KVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---- 570
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR +R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 571 -----DAMRHAAQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHL 617
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 124 VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR--CNHHSRVADYMKNNPHLGD 180
++L SR+ +CIH EVS R G A + C L R + + + Y + G
Sbjct: 23 LVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYIRERHEMDTETPICQYFEGFSLEGK 82
Query: 181 E---PI---DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW- 233
E P+ I+DL GR+ CPYF+ R IV Y+YL+DP + + E
Sbjct: 83 ESTLPVGVYSIDDLKEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMS 142
Query: 234 KNSILIFDEAHNLEGICADAASFDLS 259
+ S ++FDEAHN++ +C D+ S ++
Sbjct: 143 RESCVVFDEAHNIDNVCIDSMSVKIN 168
>gi|297705154|ref|XP_002829448.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Pongo abelii]
Length = 724
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 393 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 450
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 451 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 510
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 511 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 562
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ +++YL Q Q
Sbjct: 563 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARKKYLRDQFQ------------- 609
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 610 IRENDFLTLDTMRHAAQXVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 665
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 47/249 (18%)
Query: 38 ALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTI 97
+LE P+GTGKT+ LL +A++++ ++ +
Sbjct: 2 VVLEMPSGTGKTVSLLALIMAYQRAY---------------------------PLEVTKL 34
Query: 98 LYTSRTHSQLRQVIQEL-KTSNYRPKM---------VILGSREQLCIHREVSLLR-GSAQ 146
+Y SRT ++ +VI+EL K N+ K + L SR+ LCIH EV+ LR G
Sbjct: 35 IYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLQFLGLALSSRKNLCIHPEVTPLRFGKDV 94
Query: 147 NNACRFLCKKGTNRRCNHHSRVAD---YMKNNPHLGDEPI-----DIEDLVNIGRTFGPC 198
+ C L + H + + Y + + H + P+ +++DL +GR G C
Sbjct: 95 DGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLSAGIYNLDDLKALGRRQGWC 154
Query: 199 PYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFD 257
PYF+ R ++V Y+YL+DP + E + ++++FDEAHN++ +C D+ S +
Sbjct: 155 PYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVN 214
Query: 258 LSSGLLTAC 266
L+ L C
Sbjct: 215 LTRRTLDRC 223
>gi|50306065|ref|XP_452994.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642127|emb|CAH01845.1| KLLA0C17776p [Kluyveromyces lactis]
Length = 778
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
+ + C + IA++ F R S+I+TSGT+SP+D + + L L+ + K
Sbjct: 435 VRFTCLDASIAIKPIFERF--SSVIITSGTISPLDMYPKMLNFETVLQQSYSMTLAKKSF 492
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
I+ G ++S + R+ + G+ +V A+I PDGL++FFPSY M+ I+
Sbjct: 493 LPMILTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGLVVFFPSYLYMESIIS 552
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ + G L +W K+K +VE + LA+E Y ++ GA+ +V RG
Sbjct: 553 MWQ--TMGILDEVW----KYKLILVETPDAQETALALETYRKAC--SNGRGAILLSVARG 604
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF GR V++ G+PF ++ + E+L Q + ++ LSF
Sbjct: 605 KVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF---- 656
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RFA +KSQ+ WI
Sbjct: 657 -----DAMRHAAQCLGRVLRGKDDYGVMVLADRRFAR--KKSQLPKWI 697
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 54/296 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FYIDDLPVLFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLSLTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL++ +YR
Sbjct: 60 -------------------------QMHYPEHRKIIYCSRTMSEIEKALVELESLMDYRS 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H VS R G+ + CR + ++
Sbjct: 95 KELGFVEDFRGLGLTSRKNLCLHPRVSKERKGNVVDEKCRRMTNGQARKKKEENPDANVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C++H + +Y + +L E L+ CPYF R + +I+ Y+YL
Sbjct: 155 LCDYHENMYNYDVAD-YLPPGVFSFERLIRFCEEKRMCPYFTVRRMISMCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCID 275
+DP + + E K++I+IFDEAHN++ +C ++ S DL+ LL ++ N +D
Sbjct: 214 LDPKIAERVSKEVSKDAIVIFDEAHNIDNVCIESLSLDLTKDLLKKA-TKGANALD 268
>gi|198461164|ref|XP_002138964.1| GA25101 [Drosophila pseudoobscura pseudoobscura]
gi|198137257|gb|EDY69522.1| GA25101 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 151/292 (51%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IAM FSR + ++++TSGTLSPMD + + L + + + +
Sbjct: 82 LHFSCLDSSIAMAPVFSRFQ--TVVITSGTLSPMDMYPKILDFDPVVMSSFTMTLARPCL 139
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S + R+ + G +V +A+ VPDG++ FF SY ++ +A
Sbjct: 140 LPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGVVCFFTSYLYLESVVA 199
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + I + + ++K +E + ++ A+ +Y+ K D GAV AV RG
Sbjct: 200 SWYDQG------IVDTLLRYKLLFIETQDNAETSYALMNYV-KACDCG-RGAVLLAVARG 251
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + +YL Q Q + ++ L+F
Sbjct: 252 KVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---- 303
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR +R + DYG +IF D+RF+ ++S++ WIQ H+
Sbjct: 304 -----DAMRHAAQCVGRALRGKTDYGIMIFADKRFSRQDKRSRLPKWIQEHL 350
>gi|334328785|ref|XP_003341121.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Monodelphis
domestica]
Length = 807
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP++ + + L + +
Sbjct: 476 ANPVLHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLEIYPKILDFHPVTMATFTMTLA 533
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ IV G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 534 RVCLCPMIVGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 593
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 594 STVAAWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 645
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + E+L Q Q
Sbjct: 646 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEFLRDQFQ------------- 692
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 693 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 748
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A+++
Sbjct: 52 VDGLLVHFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTISLLALIVAYQRV-- 109
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N K
Sbjct: 110 -------------------------HPLEVTKLIYCSRTVPEIEKVIEELRKLMNSFEKQ 144
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + S V
Sbjct: 145 EGEKVPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQRQQDSSVPHCRF 204
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + PI +++DL GR G CPYF+ R +++ Y+YL+DP
Sbjct: 205 YEEFDAQGRQMPIPWGIYNLDDLKAFGRQKGWCPYFLARYSILHANVIVYSYHYLLDPKI 264
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 265 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 306
>gi|431909160|gb|ELK12750.1| TFIIH basal transcription factor complex helicase subunit [Pteropus
alecto]
Length = 736
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + +A++ F R + S+I+TSGTLSP+D + + L + + +
Sbjct: 409 LHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCL 466
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
I+ G + S + R+ I + GN ++ ++ +VPDG++ FF SY M+ +A
Sbjct: 467 CPMIIGRGNDQVTITSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVA 526
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W I E I ++K +E + + +A+E Y ++ GA+ +V RG
Sbjct: 527 SWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLSVARG 578
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + +
Sbjct: 579 KVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ-------------IREK 625
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
D+ A R Q VGR IR + DYG ++F D+RF ++ ++ WIQ H+
Sbjct: 626 DFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFTSADKRGKLPRWIQEHL 677
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 51/264 (19%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 1 MLELKRTLDAKGHGILEMPSGTGKTVSLLALIMAYQRAY--------------------- 39
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TSNYRP----KMVILG----SREQLCI 134
++ ++Y SRT ++ +VI+EL+ S Y K+ LG SR+ LCI
Sbjct: 40 ------PLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLQFLGLALSSRKNLCI 93
Query: 135 HREVSLLR-GSAQNNACRFLCKKGTNRRCNH-----HSRVADYMKNNPHLGDEPI----- 183
H EV+ LR G + C L + H R Y + + H P+
Sbjct: 94 HPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDHSLPHCRF--YEEFDIHGRQVPLPAGIY 151
Query: 184 DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDE 242
+++DL +GR G CPYF+ R ++V Y+YL+DP + E + ++++FDE
Sbjct: 152 NLDDLKAMGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDE 211
Query: 243 AHNLEGICADAASFDLSSGLLTAC 266
AHN++ +C D+ S +L+ L C
Sbjct: 212 AHNIDNVCIDSMSVNLTRRTLDRC 235
>gi|357114542|ref|XP_003559059.1| PREDICTED: DNA repair helicase UVH6-like [Brachypodium distachyon]
Length = 752
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 149/289 (51%), Gaps = 24/289 (8%)
Query: 420 CFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGI 478
C + +A+Q F+R + ++++TSGTLSP+D + + L N + +T I +
Sbjct: 438 CHDASLAIQPVFNRFQ--TVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMV 495
Query: 479 VPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKN 538
+ G +++ + R + G ++ +A VPDG++ FF SY MD ++ W +
Sbjct: 496 LTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASAVPDGIVCFFVSYSYMDGIVSSWND 555
Query: 539 TSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSE 598
I + I +HK +E LA+++Y K D GAVFF+V RGKV E
Sbjct: 556 MG------ILQEIMQHKLVFIETPDVVETTLALDNY-RKACDCG-RGAVFFSVARGKVVE 607
Query: 599 GLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYN 658
G+DF H GR V++ G+PF +R + EYL +Q Q G++ L+F
Sbjct: 608 GIDFNRHYGRLVIMFGVPFQYTLSKILRARLEYLRETSQIQEGDF----LTF-------- 655
Query: 659 QQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRVIR + DYG +IF D+R++ ++S++ WI+ H+
Sbjct: 656 -DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWIRSHLH 703
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 55/277 (19%)
Query: 4 YKIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ + G+ V FP++A Y Q YM ++ ++L + +ALLE PTGTGKT L+ ++
Sbjct: 3 FDLDGLPVCFPYDAIYPEQHEYMGELKRALDARGHALLEMPTGTGKTAALISLITSY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT--SNYR 120
+ + S+ + Y +RT ++ + + EL+ S+
Sbjct: 60 ------------------------ALANPSRPLRLFYCTRTVHEMEKTLAELRLLFSHLP 95
Query: 121 P----KMVILG--SREQLCIHREVSLLRGSAQNNACR-----FLCKKGTNRRCNHHSRVA 169
P +++ LG SR+ LC+H +VS A + CR ++C+K R + +
Sbjct: 96 PADACRLLALGLSSRKNLCVHPQVSA--SGAVDTGCRRLTASWVCEKAAYDR-ESATPLC 152
Query: 170 DYMKN---NPHLGDEPIDIE-------DLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
DY + GD + I+ DL ++GR CPYF+ R + K ++V Y Y
Sbjct: 153 DYFETFDAAARKGDLALYIQPGVYTLADLRSLGRERRICPYFLARHMVKHANVVVYSYQY 212
Query: 220 LIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAAS 255
L+DP + E K+ +++FDE HN++ +C +A S
Sbjct: 213 LLDPRVASIVSSEMQKDCVVVFDEVHNIDNVCIEALS 249
>gi|70996012|ref|XP_752761.1| TFIIH complex helicase Rad3 [Aspergillus fumigatus Af293]
gi|66850396|gb|EAL90723.1| TFIIH complex helicase Rad3, putative [Aspergillus fumigatus Af293]
gi|159131515|gb|EDP56628.1| TFIIH complex helicase Rad3, putative [Aspergillus fumigatus A1163]
Length = 770
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 30/291 (10%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--S 471
L + C + IA++ F R S+I+TSGTLSP++ + + L FP ++ + +T
Sbjct: 407 VLHFTCLDAAIAIKPVFDRF--SSVIITSGTLSPLEMYPK--MLGFPTVLQESYTMTLAR 462
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+
Sbjct: 463 RSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMES 522
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
I+ W+ G L +IW +K +VE + LA+E Y + + GA+ F V
Sbjct: 523 IISMWQGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGAILFCV 574
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
RGKVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FL
Sbjct: 575 ARGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLR-------ENYRIRENDFL 627
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
S + A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 628 SFD------AMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRNQLPKWI 670
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 54/266 (20%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + +LE P+GTGKT+ LL +A+++ L
Sbjct: 6 KTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPEHRKL-------------------- 45
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELK------------TSNYRPKMVILGSREQLCIHRE 137
+Y SRT S++ + + ELK T ++R + L SR+ LC+H
Sbjct: 46 --------IYCSRTMSEIEKALAELKELMKFRSQQLGYTEDFRA--LGLTSRKNLCLHPS 95
Query: 138 VSLLR-GSAQNNACRFLCKKGTNRR---------CNHHSRVADYMKNNPHLGDEPIDIED 187
V + G+ + CR L + C +H + D ++ + + ++
Sbjct: 96 VKREKSGTVVDARCRSLTAGFVKEKKERGEDVELCIYHENL-DLLEPHNLVPPGVFTLDG 154
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNL 246
L+ G CPYF R + +++ Y+YL+DP + + E K+ I++FDEAHN+
Sbjct: 155 LLKYGEEHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNI 214
Query: 247 EGICADAASFDLSSGLLTACISEAKN 272
+ +C +A S D++ L A N
Sbjct: 215 DNVCIEALSIDITEDSLRKATRGANN 240
>gi|441656294|ref|XP_004091106.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit [Nomascus leucogenys]
Length = 546
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 212 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 269
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 270 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 329
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 330 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 381
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 382 VARGKVSEGIDFVHHYGRAVIMFGVPYIYTQSRILKARLEYLRDQFQ------------- 428
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 429 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 484
>gi|452820568|gb|EME27609.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 751
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 148/289 (51%), Gaps = 26/289 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHV-ITSKQ 473
L C + +AMQ FSR S+ILTSGT+SP++ +++ L P+ ++ + +
Sbjct: 412 LQLACLDASLAMQPVFSRFR--SVILTSGTISPIELYSRILMFT-PVTAKSLTMSFQRRN 468
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+ IV G ++S Y R + G ++ +ARIVPDG++ FF SY M+ I
Sbjct: 469 VCPMIVTRGADQLPVSSKYDYRHDPSVVRNYGTLVMEMARIVPDGIVCFFTSYIYMETMI 528
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
W I ++I ++K +E + LA+++Y K D GA+F V R
Sbjct: 529 QLWHEMG------IIKKISEYKLIFIETPDNLECTLALKNY-RKACDCG-RGALFMCVAR 580
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKV+EG+DF H GR V++ G+PF +R + E+L Q G++ LSF
Sbjct: 581 GKVAEGIDFDRHYGRCVIVLGVPFQYTESRVLRARLEFLRTNLQISEGDF----LSF--- 633
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRVIR + DYG ++F D+RF P +K+++ W+
Sbjct: 634 ------DAVRQAAQCIGRVIRSKTDYGIMVFADKRFNRPDKKNKLPKWV 676
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 53/266 (19%)
Query: 25 MEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSV 84
M+++ ++L + +LE PTGTGKT+ LL +A+R + S L
Sbjct: 1 MKELKKTLDAGGHCILEMPTGTGKTVTLLSFFVAYRAARASIGKL--------------- 45
Query: 85 NSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYR----------PKMVILG--SREQ 131
+Y +RT ++ +V++EL + YR ++V +G +R
Sbjct: 46 -------------IYCTRTVGEIDKVLEELERVLAYRRDCNVDVASENQLVAVGLTTRRN 92
Query: 132 LCIHREV--SLLRGSAQNNACRFL----CKKG-TNRRCNHHSRVADYMKNNPHLGDEPID 184
LC+ V S R A ++ CR L ++G T+R + + ++ L P
Sbjct: 93 LCLLPAVKDSETREEA-DSKCRSLTASWVREGITSRSSDSLCPYYENLQQKGELFQIPPG 151
Query: 185 IEDLVNI---GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIF 240
+ + ++ G G CPYF R + I+ Y+YL+DP + + E ++ +++F
Sbjct: 152 VYSMSSLNAFGEEQGICPYFTARRSLQYASIIVYNYHYLLDPKISRMISTELERDCVVVF 211
Query: 241 DEAHNLEGICADAASFDLSSGLLTAC 266
DEAHN++ +C + S L + C
Sbjct: 212 DEAHNIDDVCIETMSVHLKKDTIQRC 237
>gi|6503086|gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D homolog [Arabidopsis
thaliana]
Length = 758
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 148/293 (50%), Gaps = 24/293 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L C + +A++ F R + S+++TSGTLSP+D + + L + +T I
Sbjct: 433 LQLSCHDASLAIKPVFDRFQ--SVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCI 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
++ G +++ + R + G +V + IVPDG++ FF SY MD IA
Sbjct: 491 CPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIA 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W N T I E I + K +E + LA+++Y + GAVFF+V RG
Sbjct: 551 TW------NETGILEEIMQQKLVFIETQDVVETTLALDNY--RRACDCGRGAVFFSVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KV+EG+DF H GR VV+ G+PF +R + EYL Q + G++ L+F
Sbjct: 603 KVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDF----LTF---- 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRVIR + DYG +IF D+R++ ++S++ WI H++
Sbjct: 655 -----DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 702
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 56/277 (20%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+KI + V FP++ Y Q YM ++ ++L K + LLE PTGTGKT+ LL ++R S
Sbjct: 3 FKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYRLS 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYR- 120
DS + ++Y +RT ++ + + ELK +Y+
Sbjct: 63 --------------------------RPDSPI-KLVYCTRTVHEMEKTLGELKLLHDYQV 95
Query: 121 ------PKMVILG--SREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRC------NHH 165
K++ LG SR+ LC++ +V +A+N ++ C+K T N +
Sbjct: 96 RHLGTQAKILALGLSSRKNLCVNTKVL----AAENRDSVDAACRKRTASWVRALSTENPN 151
Query: 166 SRVADYMKN------NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
+ D+ +N N L +EDL G+ G CPYF+ R + + +++ Y Y
Sbjct: 152 VELCDFFENYEKAAENALLPPGVYTLEDLRAFGKNRGWCPYFLARHMIQFANVIVYSYQY 211
Query: 220 LIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAAS 255
L+DP + E K S+++FDEAHN++ +C +A S
Sbjct: 212 LLDPKVAGFISKELQKESVVVFDEAHNIDNVCIEALS 248
>gi|345785629|ref|XP_541562.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit [Canis lupus familiaris]
Length = 760
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 429 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 486
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 487 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 546
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 547 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 598
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 599 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 645
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VG IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 646 IRXNDFLTLDAMRHAAQCVGGAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 701
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV LR G + C L + S +
Sbjct: 98 EGEKLPFLGLALSSRKNLCIHPEVMPLRFGKDVDGKCHSLTASYVRAQYQQDSSLPHCRF 157
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +G+ G CPYF+ R ++V Y+YL+DP
Sbjct: 158 YEEFDVHGRQVPLPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKI 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ + E + ++++FDEAHN++ +C D+ S +++ L C
Sbjct: 218 AELVSKELARKAVVVFDEAHNIDNVCIDSMSVNITRRTLDRC 259
>gi|44889982|emb|CAF32100.1| DNA repair helicase, putative [Aspergillus fumigatus]
Length = 767
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 30/291 (10%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT--S 471
L + C + IA++ F R S+I+TSGTLSP++ + + L FP ++ + +T
Sbjct: 404 VLHFTCLDAAIAIKPVFDRF--SSVIITSGTLSPLEMYPK--MLGFPTVLQESYTMTLAR 459
Query: 472 KQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQ 531
+ IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+
Sbjct: 460 RSFLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMES 519
Query: 532 CIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAV 591
I+ W+ G L +IW +K +VE + LA+E Y + + GA+ F V
Sbjct: 520 IISMWQGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGAILFCV 571
Query: 592 CRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFL 651
RGKVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FL
Sbjct: 572 ARGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLR-------ENYRIRENDFL 624
Query: 652 SGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
S + A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 625 SFD------AMRHAAQCLGRVLRGKDDYGIMVLADRRFQ--KKRNQLPKWI 667
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 115/286 (40%), Gaps = 82/286 (28%)
Query: 11 VEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTL 69
V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++ L
Sbjct: 10 VLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAYQQHYPEHRKL 69
Query: 70 GSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------------TS 117
+Y SRT S++ + + ELK T
Sbjct: 70 ----------------------------IYCSRTMSEIEKALAELKELMKFRSQQLGYTE 101
Query: 118 NYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------CNHHSR 167
++R + L SR+ LC+H V + G+ + CR L + C +H
Sbjct: 102 DFRA--LGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEKKERGEDVELCIYHEV 159
Query: 168 VADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRK 227
AD ++ + + PY +++ Y+YL+DP +
Sbjct: 160 CADVLR-------------------KLWVQMPY---------CNVIIYSYHYLLDPKIAE 191
Query: 228 GLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+ E K+ I++FDEAHN++ +C +A S D++ L A N
Sbjct: 192 RVSRELSKDCIVVFDEAHNIDNVCIEALSIDITEDSLRKATRGANN 237
>gi|121701205|ref|XP_001268867.1| TFIIH complex helicase Rad3, putative [Aspergillus clavatus NRRL 1]
gi|119397010|gb|EAW07441.1| TFIIH complex helicase Rad3, putative [Aspergillus clavatus NRRL 1]
Length = 771
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 148/288 (51%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + L + L+ + +
Sbjct: 408 LHFTCLDASIAIKPVFDRF--SSVIITSGTLSPLEMYPKMLDFDTVLQESYSMTLARRSF 465
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ ++
Sbjct: 466 LPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDGIVVFFPSYLYMESIVS 525
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +IW +K +VE + LA+E Y + + GA+ F V RG
Sbjct: 526 MWQGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGAILFCVARG 577
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 578 KVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD 630
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 631 ------AMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRNQLPKWI 670
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 54/266 (20%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + N +LE P+GTGKT+ LL +A+++ L
Sbjct: 6 KTLDAQGNCVLEMPSGTGKTVTLLSLIVAYQQHYPEHRKL-------------------- 45
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELK------------TSNYRPKMVILGSREQLCIHRE 137
+Y SRT S++ + + ELK T ++R + L SR+ LC+H
Sbjct: 46 --------IYCSRTMSEIEKALAELKELMKYRTQQLGYTEDFRA--LGLTSRKNLCLHPS 95
Query: 138 VSLLRGSAQNNA-CRFLCKKGTNRR---------CNHHSRVADYMKNNPHLGDEPIDIED 187
V + A +A CR L + C +H + D ++ + + ++
Sbjct: 96 VKREKSGAVVDARCRSLTAGFVKEKKERGEDVELCIYHENL-DLLEPHNLVPPGVFTLDG 154
Query: 188 LVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNL 246
L+ G CPYF R + +++ Y+YL+DP + + E K+ I++FDEAHN+
Sbjct: 155 LLKYGEEHKQCPYFSARRMMPYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNI 214
Query: 247 EGICADAASFDLSSGLLTACISEAKN 272
+ +C +A S D++ L A N
Sbjct: 215 DNVCIEALSIDITEDSLRKATKGANN 240
>gi|351706985|gb|EHB09904.1| TFIIH basal transcription factor complex helicase subunit, partial
[Heterocephalus glaber]
Length = 759
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 428 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 485
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S + R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 486 RVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 545
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ G + +
Sbjct: 546 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GPILLS 597
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q + ++ L+F
Sbjct: 598 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDF----LTF 653
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 654 ---------DAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL 700
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 132/282 (46%), Gaps = 48/282 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP++ Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++ +
Sbjct: 4 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQWAY- 62
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQEL-KTSNYRPKM 123
++ ++Y SRT ++ +VI+EL K N+ K
Sbjct: 63 --------------------------PLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQ 96
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRVAD--- 170
+ L SR+ LCIH EV+ LR G + C L + + +
Sbjct: 97 EGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDASMPHCRF 156
Query: 171 YMKNNPHLGDEPI-----DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
Y + + H P+ +++DL +G+ G CPYF+ R + Y+YL+DP
Sbjct: 157 YEEFDAHGRQVPLPTGIYNLDDLKALGQRQGWCPYFLARYSILHANEGVYTYHYLLDPKI 216
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
+ E + ++++FDEAHN++ +C D+ S +L+ L C
Sbjct: 217 ADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRC 258
>gi|115492105|ref|XP_001210680.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
gi|114197540|gb|EAU39240.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
Length = 790
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 147/288 (51%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + L ++ + +
Sbjct: 432 LHFTCLDAAIAIKPVFDRF--SSVIITSGTLSPLEMYPKMLGFTTVMQESYSMTLARRSF 489
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 490 LPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGVVVFFPSYLYMESIIS 549
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +IW +K +VE + LA+E Y + + GA+ F V RG
Sbjct: 550 MWQGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGAILFCVARG 601
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 602 KVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF ++SQ+ WI
Sbjct: 655 ------AMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRSQLPKWI 694
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 55/293 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQLH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
L +Y SRT S++ + + ELK
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMKFRA 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR-------- 161
T ++R + L SR+ LC+H V + G+ + CR L +
Sbjct: 95 KELGYTEDFRA--LGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEKKERGEDVE 152
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ + + ++ L+ G CPYF R + +++ Y+YL
Sbjct: 153 LCTYHENL-DLLEPHNLVPPGVFTLDGLIKYGEQHKQCPYFSARRMMPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+DP + + E+ K+ I++FDEAHN++ +C ++ S D++ L A N
Sbjct: 212 LDPKIAERVSREFSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKATRGANN 264
>gi|224002519|ref|XP_002290931.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972707|gb|EED91038.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1848
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 148/334 (44%), Gaps = 56/334 (16%)
Query: 402 ANAADVLKGKASRTLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL---- 457
N D K TL PG MQ+ S E +++L SG+LSP+ S EL L
Sbjct: 1173 GNGCDGSTPKWEATLHLNLLTPGPLMQQLSN-ECRTLVLASGSLSPLPSLCAELNLFPAD 1231
Query: 458 --------------------------NFPLRVENPHVIT-SKQIWAGIVPVGPSGYLLNS 490
N P +E HV+ KQ++A + G L
Sbjct: 1232 ASIGVSSPKPTSTQDILQPTVQKRLQNRPPPLEADHVVDLDKQLFAVSIGAFADGSELRV 1291
Query: 491 SYRNRDSIEYKQELGNTIVNIARIVP-DGLLIFFPSYYLMDQCIACWK-NTSHGNLTTIW 548
+ +N + ++LG+TIVNI +P G+LIF PSY L+ +C W N N + W
Sbjct: 1292 AQKNYSQNSFIEKLGDTIVNIISGIPKGGVLIFLPSYSLLRRCERLWNPNGYRNNRRSFW 1351
Query: 549 ERICKHKKPVVEPRQSSL--------------FPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
+ + P V R L F ++YM +K G V FAV RG
Sbjct: 1352 SQQEESDGPSVFDRLKQLKHNVIVEPTGGQDEFEAKKDEYMESVK--HFGGCVLFAVFRG 1409
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
K+SEG+ F D+ R V+ G+P + +++K +Y D Q + + + L G
Sbjct: 1410 KMSEGISFNDNNARGVICVGLPLPSAFSLPIQVKMKYNDEQRKLR------HRTDLLPGR 1463
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDER 688
+WY QQA RA+ QA+GR IRH DYGAI D R
Sbjct: 1464 EWYQQQAYRAIAQALGRCIRHAADYGAIFLLDSR 1497
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 18/206 (8%)
Query: 3 TYKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRK 61
++ + GI + +PF + Q +I++L+N + +LESPTGTGK+ +LC+ LAW++
Sbjct: 480 SFFVEGIKIGWPFPQVMKPQRQMAIHLIKALKNSKHVVLESPTGTGKSAAILCSVLAWQR 539
Query: 62 SLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLP---TILYTSRTHSQLRQVIQELKTSN 118
+ + + ++ S + + V G + P TI+Y SRTHSQ+ Q++ LK++
Sbjct: 540 F--HYKQMLKERRDERSSTAADVAERNEGAASEPKKVTIVYCSRTHSQVAQMVASLKSTP 597
Query: 119 YRPKMVILGSREQLCIHREV-------SLLRGSAQNNACRFLCKKGTNRRCNHHSRVADY 171
YRP+M ILGSRE+LCIH+ + + G NN CR + R ++++
Sbjct: 598 YRPRMAILGSRERLCIHKSIKPRGKNAEAVSGINVNNECRVRVRNTEKSR---KHKLSNP 654
Query: 172 MKNNPHLGDEPIDIEDLVNIGRTFGP 197
+P+L D+P E + G T+ P
Sbjct: 655 DSRDPYLDDDP--PESMPGDGNTYNP 678
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFD 257
CPY+++ L K +I+FAPYNY++DP R +G++ S++I DEAHN+E A S +
Sbjct: 857 CPYYISHILAKDAEIIFAPYNYVLDPSIRDAMGLDLTGSVVILDEAHNVEDTLRSAGSGE 916
Query: 258 L 258
Sbjct: 917 F 917
>gi|45201210|ref|NP_986780.1| AGR114Cp [Ashbya gossypii ATCC 10895]
gi|44986064|gb|AAS54604.1| AGR114Cp [Ashbya gossypii ATCC 10895]
gi|374110029|gb|AEY98934.1| FAGR114Cp [Ashbya gossypii FDAG1]
Length = 774
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 146/287 (50%), Gaps = 24/287 (8%)
Query: 416 LSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIW 475
+ + C + IA++ + S+I+TSGT+SP+D + + L L+ + K
Sbjct: 435 MRFTCLDASIAIKPVFE-KFSSVIITSGTISPLDMYPRMLNFETVLQKSYSMTLAQKSFL 493
Query: 476 AGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIAC 535
I+ G ++S + R+ + G+ +V A+I PDG+++FFPSY M+ I+
Sbjct: 494 PMIITKGSDQVAISSRFEIRNDPSIVRNYGSILVEFAKITPDGMVVFFPSYLYMESIIST 553
Query: 536 WKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGK 595
W+ + G L +W K+K +VE + LA+E Y ++ GA+ +V RGK
Sbjct: 554 WQ--TMGILDEVW----KYKLILVETPDAQETSLALETYRKAC--SNGRGAILLSVARGK 605
Query: 596 VSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGED 655
+SEG+DF H GR V++ G+PF ++ + E+L Q + ++ LSF
Sbjct: 606 ISEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDF----LSF----- 656
Query: 656 WYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF+ +K+Q+ WI
Sbjct: 657 ----DAMRHAAQCLGRVLRGKDDYGVMVLADRRFSR--KKNQLPKWI 697
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 53/284 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ + Y Q YM + ++L N++LE P+GTGKT+ LL T+A+
Sbjct: 3 FFIDDLPVIFPYPKIYPEQYQYMCDIKKTLDAGGNSILEMPSGTGKTVSLLALTVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + I+Y SRT S++ + + EL++ +YR
Sbjct: 60 -------------------------QMHYKEHRKIIYCSRTMSEIEKALVELESLMDYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------- 161
K + L SR+ LC+H VS R G+ + CR + R
Sbjct: 95 KELQYQEEFRGLGLTSRKNLCLHPRVSKERKGTVVDEKCRRMTNGQARARKQQDPEANVE 154
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
CN+H + +Y +L E L+ CPYF R + +I+ Y+YL
Sbjct: 155 LCNYHENMYNYSPEE-YLPLGVYSFEKLIRYCEDKTLCPYFTVRRMISMCNIIIYSYHYL 213
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
+DP + + E K++I+IFDEAHN++ +C ++ S DL+ LL
Sbjct: 214 LDPKIEERVSREVSKDAIVIFDEAHNIDNVCIESLSLDLTKDLL 257
>gi|449330281|gb|AGE96540.1| DNA repair helicase [Encephalitozoon cuniculi]
Length = 742
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 175/360 (48%), Gaps = 53/360 (14%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNF-PLRVE-------- 464
TL C + IA+ F+R ++I+TSGT+SP+D + + LNF P R+
Sbjct: 409 TLRLACLDSSIAISPVFARFR--NVIITSGTMSPIDMYPK--ILNFVPSRIAEIGATLDR 464
Query: 465 ---NPHVITSKQIWAGIVPVGP--------SGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
+P +IT + + SG +L +S+ R + G+ +V +++
Sbjct: 465 NSISPLIITKGNDQMTLRALSDDMETTDACSGDVLTTSFSLRSDPSVVRNYGHLMVELSK 524
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
+VPDG++ FFPSY M++ ++ W TS I I K+K VE LA+ +
Sbjct: 525 VVPDGIVCFFPSYMYMEEIVSLWAETS------IINEISKNKLVFVETPDGRETELALAN 578
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y K + G + F+V RGKVSEG+DF D GR VV+ G+PF VRLK+ LD
Sbjct: 579 Y--KRACDNGRGGMLFSVARGKVSEGVDFEDGYGRCVVMLGVPFQYTE--SVRLKKR-LD 633
Query: 634 LQAQSQG-GEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHP 692
+ G EY D+ A R Q +GRV+R+++DYG +I DERF
Sbjct: 634 FLREEHGIKEY-----------DFLTFDAMRHAAQCLGRVLRNKNDYGLMILADERFERN 682
Query: 693 SRKSQISLWIQPHIQCYSKFGDVVYTLT---RFFRE--ERICGSTNLKLIKTEVSGDVRE 747
+KS++ WI+ I + V L+ RFFRE + G+ N L + +V V E
Sbjct: 683 DKKSKLPKWIRNCIDGGNSNLSVDMALSIARRFFREMAQECTGAGNSLLGEKDVEAFVFE 742
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 47/266 (17%)
Query: 11 VEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTL 69
V FP+ + Y QL YM +V +SL NK + L+E P+GTGKT+ LL T+++
Sbjct: 10 VYFPYSSVYPEQLKYMREVKRSLDNKGHCLIEMPSGTGKTVALLSMTISY---------- 59
Query: 70 GSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-----TSNYRPKMV 124
Q+ +V+ ++Y SRT ++ + ++EL +RP
Sbjct: 60 ------QLHMKSKNVHFK---------VVYCSRTVPEVEKALKELDRVVEYIKKHRPIEF 104
Query: 125 I---LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE 181
+ L R+ LCI++ + L+ + ACR L K +C+ + +AD+ +
Sbjct: 105 LGLGLTGRKNLCINK--AALKSFNVDVACRRLVNKLAESKCDFYENLADFR-------EV 155
Query: 182 PIDIEDLVNI---GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK-NSI 237
P+ + D + + G G CPY++ R D + PYNYLIDP + E NS+
Sbjct: 156 PVAVYDFLQLKEMGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRICAIVSSELGPNSV 215
Query: 238 LIFDEAHNLEGICADAASFDLSSGLL 263
+IFDEAHN++ C + S ++ +L
Sbjct: 216 VIFDEAHNIDSHCIEVLSIEIRRNVL 241
>gi|223478945|ref|YP_002583205.1| DNA repair helicase Rad3 [Thermococcus sp. AM4]
gi|214034171|gb|EEB74997.1| DNA repair helicase Rad3 [Thermococcus sp. AM4]
Length = 640
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 175/718 (24%), Positives = 297/718 (41%), Gaps = 138/718 (19%)
Query: 13 FPFEAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ 72
P+ QL ++E V +++ NA++E+PTG GKT+ +L L K LG
Sbjct: 7 LPYRPRPHQLEFIELVRDAVERGENAIIEAPTGFGKTVSVLAGVLPVAKELGL------- 59
Query: 73 VNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSRE 130
+LY +RTH Q+ +VI+ELK N + K+ V + SR+
Sbjct: 60 -----------------------KVLYLARTHRQMDRVIEELKAINGKAKVSGVEMRSRK 96
Query: 131 QLCIHREVSLLRGSAQNN-----ACRFLCKKGTNRRC----NHHSRVADYMKNNPHLGDE 181
+LC+H S LR + C+ L K G +C N + A+ + +
Sbjct: 97 ELCLH---SYLREYTTDAYTAMVVCKNLRKSG---KCPFYENEKKKKAELDELVNFFLET 150
Query: 182 PIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEWKNSI 237
P +++N T CPY +TR + D++ A Y Y ++P R+ L +++ + I
Sbjct: 151 PASPVEVLNYSETLEICPYDVTRLVAYKADVIVASYLYALNPTIRENFLTYLDLDYSDLI 210
Query: 238 LIFDEAHNLEGICADAASFDLSSGLLTACISEAKNCIDISSTRRGQSSD-ETLNPDNFAI 296
+IFDEAHNL A S +S + I EA R + ++ ++ I
Sbjct: 211 VIFDEAHNLPDQAISALSDRMSIHTVNRAIKEA------DEYREHEIANFLSIFGKGLEI 264
Query: 297 LRALLLKLEKRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQ 356
L + L + + E PI + EL F L+ L + K ++ + + ++
Sbjct: 265 LYSEKLG-NRDVEETPI-APELIFG-------HLMNVLGLDTRWLVKTLNEMVAVGDAIR 315
Query: 357 EDKLQNKKSTTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTL 416
ED++ NK I + L + G + +L + +L
Sbjct: 316 EDRI-NKNKPPRSYIGRVGEFLLLWLSLIGRDDYLF--------------LLSREKGLSL 360
Query: 417 SWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKL------NFPLRV--ENPHV 468
+P A+ F R +V S I SGTL+P+++F + + FP V EN V
Sbjct: 361 ELVALDPSRALS-FIR-DVQSAIFMSGTLTPLEAFRDVMGIEKARLKKFPRMVKRENAQV 418
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ +K + S+ S+E +++G+ IV R++P + +F SY +
Sbjct: 419 LVAKDV---------------STRGEERSMELYRKMGDYIVEAVRLIPKNVGVFTASYEV 463
Query: 529 MDQCIACWKNTSHGNLTTIWERICKH---KKPVVEPRQSSLFPLAIEDYMAKLKDTSTSG 585
+ ++ NL E K +K R++ L +A+ K + SG
Sbjct: 464 LQGLLSA-------NLQVRLEETGKAVFIEKQGASSRENDLL-------VAQFKAHARSG 509
Query: 586 -AVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYK 644
AV V G+ SEG D++ V++ G+P+A T P+V+ + Y + + +G Y
Sbjct: 510 GAVLLGVMGGRNSEGQDYSGDEMNGVILVGIPYARPT-PRVQAQIRYFERKFPGKGRYYG 568
Query: 645 ETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
Y A R + QA GRV R + G+II D R + + W+
Sbjct: 569 ------------YYLPAHRKLVQAAGRVHRSAEEKGSIIILDYRVLWRNVRKDFPDWM 614
>gi|402078170|gb|EJT73519.1| DNA repair helicase rad15 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 791
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 149/289 (51%), Gaps = 26/289 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + IA++ F R + ++I+TSGTLSP++ + + L + ++ + +
Sbjct: 431 VLHFTCLDAAIAIKPVFERFK--TVIITSGTLSPLEMYPKMLGFDAIVQESYSMTLGRRS 488
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
IV G ++SS+ R + + GN + A+I PDG+++FFPSY+ M+ I
Sbjct: 489 FLPMIVTKGSDQAAISSSFAVRTDLPVVRNYGNLLTEFAKITPDGMVVFFPSYFYMESII 548
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W+ + I E + K+K +VE + +A+E Y + + +GAV F V R
Sbjct: 549 SMWQGMN------ILEEVWKYKLILVETPDAQETAVALETY--RTACCNGTGAVMFCVAR 600
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF GRAV+ G+P+ ++ + E+L +ET +
Sbjct: 601 GKVSEGIDFDHQYGRAVLCIGVPYQYTESLILKARLEFL-----------RETYR--IKE 647
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
D+ + A R Q +GRV+R + DYG ++ D RF P ++SQ+ WI
Sbjct: 648 NDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRF--PKKRSQLPKWI 694
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 129/291 (44%), Gaps = 51/291 (17%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L N +LE P+GTGKT LL +A+
Sbjct: 3 FYIDDLPVIFPYPRIYPEQYAYMCDLKRTLDAGGNCVLEMPSGTGKTATLLSLIVAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + + ++Y SRT S++ + + EL+ YR
Sbjct: 60 -------------------------QQHNPEHRKLIYCSRTMSEIEKALAELRALMKYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLRGSAQNNA-CRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + A +A CR L + C
Sbjct: 95 EQLGKEEDFRGLGLTSRKNLCLHPAVKREKSGAVVDARCRSLTAGFIKEKKDKGEDVDVC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + + + L+ G CPYF R + + +++ Y+YL+D
Sbjct: 155 VYHDNL-DLLEPHNLIPNGVWTFDGLLRYGEQHKQCPYFTARRMMQYCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
P + + E ++SI++FDEAHN++ +C ++ S DL+ L A+N
Sbjct: 214 PKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSTDLTEDSLRKATRGAQN 264
>gi|56118508|ref|NP_001008131.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Xenopus (Silurana) tropicalis]
gi|51703768|gb|AAH81339.1| ercc2 protein [Xenopus (Silurana) tropicalis]
Length = 760
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 24/293 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + +A++ F R + S+I+TSGTLSP+D + + L +
Sbjct: 432 VLHFSCLDSSLAIKPVFQRFQ--SVIITSGTLSPLDIYPKILDFRPVTMATFTMTLARVC 489
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+ +V G ++S + R+ + + GN ++ ++ +VPDG++ FF SY M+ +
Sbjct: 490 LCPMVVGRGNDQVAMSSKFETREDLAVMRNYGNLLLEMSAVVPDGIVGFFTSYLYMENIV 549
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
A W I E I ++K +E + + +A+E Y ++ GA+ +V R
Sbjct: 550 ASWYEQG------ILENIQRNKLIFIETQDGAETSVALEKYQEACENGR--GAILLSVAR 601
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV++ G+P+ ++ + ++L Q L
Sbjct: 602 GKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLQFLRDQFH-------------LRE 648
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
D+ A R Q VGR IR + DYG ++F D+R+A ++ ++ LWIQ H+
Sbjct: 649 NDFLTFDAMRHAAQCVGRAIRGKTDYGIMLFADKRYARSDKRGKLPLWIQEHL 701
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 54/285 (18%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
I G+ V FP+E Y Q YM ++ ++L K + +LE P+GTGKT+ LL +A++++
Sbjct: 5 IDGLLVYFPYEYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRAY- 63
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--------- 115
++ ++Y SRT ++ +V++EL+
Sbjct: 64 --------------------------PLEVTKLIYCSRTVPEIEKVVEELRKLIEYTQAQ 97
Query: 116 ---TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLC---------KKGTNRRC 162
T N+ + L SR LC++ EVS LR G + C L + T + C
Sbjct: 98 TGGTLNFMA--LALSSRRNLCVNPEVSALRFGKEIDGRCHSLTASFVRSQKQRDPTVQTC 155
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+ P L +++DL +GR G CPY++ R ++V Y+YL+D
Sbjct: 156 RFFEEFDAIGRETP-LPPGIYNLDDLRTLGRQKGWCPYYLARHALGQCNVVVYSYHYLLD 214
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTAC 266
P + E K S+++FDEAHN++ +C D+ S ++ L C
Sbjct: 215 PKIADLVSRELSKKSVVVFDEAHNIDNVCIDSMSVTITRRTLERC 259
>gi|341583148|ref|YP_004763640.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus sp. 4557]
gi|340810806|gb|AEK73963.1| ERCC2/XPD/Rad3-related DNA repair helicase [Thermococcus sp. 4557]
Length = 671
Score = 142 bits (359), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 175/729 (24%), Positives = 306/729 (41%), Gaps = 141/729 (19%)
Query: 24 YMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSS 83
++E V ++++N N ++E+PTG GKT+ +L L K +G
Sbjct: 42 FIELVSKAVENGENVIIEAPTGFGKTVSVLAGVLPHAKEMGY------------------ 83
Query: 84 VNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNYRPKM--VILGSREQLCIHREVSLL 141
+LY +RTH Q+ +VI+ELK + + + V L SR+ LC+H ++
Sbjct: 84 ------------KVLYLARTHRQMDRVIEELKAISRKSPVSGVELRSRKDLCLHTYLTQF 131
Query: 142 RGSAQNN--ACRFLCKKGTNRRC----NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTF 195
A C+ L K G +C N + A++ + EP ++++ +T
Sbjct: 132 TSDAYTAMVVCKNLKKMG---KCEFYENEKKKKAEFDELVRFFLGEPSHPAEILDYSQTL 188
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKG----LGVEWKNSILIFDEAHNLEGICA 251
CPY +T+ + + D++ A Y YL+ P R+ L +++ + I++FDEAHNL
Sbjct: 189 ELCPYDLTKRIAEKADVIVASYLYLLSPTIRENFISSLDLDYSDMIVVFDEAHNLPDQAI 248
Query: 252 DAASFDLSSGLLTACISEAKNCID------ISSTRRGQSSDETLNPDNFAILRALLLKLE 305
A S +S + I EA + +S RG E L +
Sbjct: 249 SALSDKISINTINRAIKEADEYNEHEIANFLSILGRGL---EILFQEKLG---------S 296
Query: 306 KRIAEVPINSKELGFTKPGPYIYELLADLNITQETAYKLIDIVEVAAELLQEDKLQNKKS 365
K I E PI EL F+ ++ E+L L+ T+ L D+V V + ++ED+++ K
Sbjct: 297 KDIQETPIQP-ELVFS----HVVEVLG-LD-TRWLVKTLNDMVAV-GDSIREDRIEKGKP 348
Query: 366 TTACRIESISNILKIIFRDKGTAHSAYYRVHVREADANAADVLKGKASRTLSWWCFNPGI 425
+ I + L + G + ++ +L +P
Sbjct: 349 PRSY-IGRVGEFLLLWLSLIGREDYLF--------------LMSRDRGLSLELVALDPSK 393
Query: 426 AMQEFSRLEVGSIILTSGTLSPMDSFAQELKL------NFPLRV--ENPHVITSKQIWAG 477
A+ +V S I SGTL+P+++F + + FP V EN V+ +K +
Sbjct: 394 ALSFIK--DVQSAIFMSGTLTPLEAFRDVMGVENARLKKFPRMVKRENAQVLVAKDV--- 448
Query: 478 IVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWK 537
S+ + S++ +++ + IV ARI+P + +F SY ++ ++
Sbjct: 449 ------------STRGDERSLQVYRKMVDYIVEAARIIPKNVGVFAASYEVLQGLLSA-- 494
Query: 538 NTSHGNLTTIWERICKHKKPVVEPRQ---SSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
NL R+ + K V +Q S+ L + + A + +GAV V G
Sbjct: 495 -----NLQV---RLEETGKAVFIEKQGVSSAENDLMVAQFKAHARG---NGAVLLGVMGG 543
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
+ SEG D++ VV+ G+P+A T P+V+ + Y + + +G Y
Sbjct: 544 RNSEGQDYSGDEMNGVVLVGIPYARPT-PRVQARIRYFERKFPEKGRYYG---------- 592
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQCYSKFGD 714
Y A R + QA GRV R + G+I+ D R K + W+ ++ G
Sbjct: 593 --YYLPAHRKLVQAAGRVHRSAEEKGSIVVLDYRLLWRGIKKDLPDWMVETVRPVD-LGR 649
Query: 715 VVYTLTRFF 723
+ L RF+
Sbjct: 650 MRLYLKRFW 658
>gi|19074270|ref|NP_585776.1| DNA REPAIR HELICASE OF THE RAD3/XPD SUBFAMILY [Encephalitozoon
cuniculi GB-M1]
gi|19068912|emb|CAD25380.1| DNA REPAIR HELICASE OF THE RAD3/XPD SUBFAMILY [Encephalitozoon
cuniculi GB-M1]
Length = 742
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 174/359 (48%), Gaps = 51/359 (14%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNF-PLRVE-------- 464
TL C + IA+ F+R ++I+TSGT+SP+D + + LNF P R+
Sbjct: 409 TLRLACLDSSIAISPVFARFR--NVIITSGTMSPIDMYPK--ILNFVPSRIAEIGATLDR 464
Query: 465 ---NPHVITSKQIWAGIVPVGP--------SGYLLNSSYRNRDSIEYKQELGNTIVNIAR 513
+P +IT + + SG +L +S+ R + G+ +V +++
Sbjct: 465 NSISPLIITKGNDQMTLRALSDDMETTDACSGDVLTTSFSLRSDPSVVRNYGHLMVELSK 524
Query: 514 IVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIED 573
+VPDG++ FFPSY M++ ++ W TS I I K+K VE LA+ +
Sbjct: 525 VVPDGIVCFFPSYMYMEEIVSLWAETS------IINEISKNKLVFVETPDGRETELALAN 578
Query: 574 YMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLD 633
Y K + G + F+V RGKVSEG+DF D GR VV+ G+PF VRLK+
Sbjct: 579 Y--KRACDNGRGGMLFSVARGKVSEGVDFEDGYGRCVVMLGVPFQYTE--SVRLKKRLDF 634
Query: 634 LQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPS 693
L+ + EY D+ A R Q +GRV+R+++DYG +I DERF
Sbjct: 635 LREEYGIKEY-----------DFLTFDAMRHAAQCLGRVLRNKNDYGLMILADERFERND 683
Query: 694 RKSQISLWIQPHIQCYSKFGDVVYTLT---RFFRE--ERICGSTNLKLIKTEVSGDVRE 747
+KS++ WI+ I + V L+ RFFRE + G+ N L + +V V E
Sbjct: 684 KKSKLPKWIRNCIDGGNSNLSVDMALSIARRFFREMAQECTGAGNSLLGEKDVEAFVFE 742
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 47/266 (17%)
Query: 11 VEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTL 69
V FP+ + Y QL YM +V +SL NK + L+E P+GTGKT+ LL T+++
Sbjct: 10 VYFPYSSVYPEQLKYMREVKRSLDNKGHCLIEMPSGTGKTVALLSMTISY---------- 59
Query: 70 GSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-----TSNYRPKMV 124
Q+ +V+ ++Y SRT ++ + ++EL +RP
Sbjct: 60 ------QLHMKSKNVHFK---------VVYCSRTVPEVEKALKELDRVVEYIKKHRPIEF 104
Query: 125 I---LGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDE 181
+ L R+ LCI++ + L+ + ACR L K +C+ + +AD+ +
Sbjct: 105 LGLGLTGRKNLCINK--AALKSFNVDVACRRLVNKLAESKCDFYENLADFR-------EV 155
Query: 182 PIDIEDLVNI---GRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWK-NSI 237
P+ + D + + G G CPY++ R D + PYNYLIDP + E NS+
Sbjct: 156 PVAVYDFLQLKEMGEKKGICPYYLVRRSIPVCDCIIYPYNYLIDPRICAIVSSELGPNSV 215
Query: 238 LIFDEAHNLEGICADAASFDLSSGLL 263
+IFDEAHN++ C + S ++ +L
Sbjct: 216 VIFDEAHNIDSHCIEVLSIEIRRNVL 241
>gi|90075836|dbj|BAE87598.1| unnamed protein product [Macaca fascicularis]
Length = 323
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 138/277 (49%), Gaps = 23/277 (8%)
Query: 430 FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQIWAGIVPVGPSGYLLN 489
F R + S+I+TSGTLSP+D + + L + + + I+ G ++
Sbjct: 11 FERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAIS 68
Query: 490 SSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWE 549
S + R+ I + GN ++ ++ +VPDG++ FF SY M+ +A W I E
Sbjct: 69 SKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQG------ILE 122
Query: 550 RICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRA 609
I ++K +E + + +A+E Y ++ GA+ +V RGKVSEG+DF H GRA
Sbjct: 123 NIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLSVARGKVSEGIDFVHHYGRA 180
Query: 610 VVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRAVNQAV 669
V++ G+P+ ++ + EYL Q Q + D+ A R Q V
Sbjct: 181 VIMFGVPYVYTQSRILKARLEYLRDQFQ-------------IRENDFLTFDAMRHAAQCV 227
Query: 670 GRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
GR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 228 GRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 264
>gi|347969002|ref|XP_311900.4| AGAP002988-PA [Anopheles gambiae str. PEST]
gi|333467742|gb|EAA08105.4| AGAP002988-PA [Anopheles gambiae str. PEST]
Length = 760
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 24/292 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
+ + C + IAM+ F R + S+++TSGTLSPMD + + L + + +
Sbjct: 433 MHFSCLDSSIAMKPIFQRFQ--SVVITSGTLSPMDMYPKILDFEPVVMSSFTMTLARPCL 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++S + R+ + G +V A+ VPDG++ FF SY ++ +A
Sbjct: 491 LPMIVARGNDQVAISSRFETREDTAVTRNYGQLLVETAKTVPDGVVCFFTSYLYLESVVA 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W + I + + ++K +E + ++ A+ +Y+ + GAV AV RG
Sbjct: 551 SWYDQG------IIDTLLRYKLLFIETQDNAETSYALMNYVKACE--CGRGAVLLAVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV++ G+P+ ++ + +YL Q Q + ++ L+F
Sbjct: 603 KVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDF----LTF---- 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
A R Q VGR IR + DYG +IF D+RF+ ++ ++ WIQ H+
Sbjct: 655 -----DALRHAAQCVGRAIRGKTDYGIMIFADKRFSRQDKRGKLPKWIQEHL 701
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 125/279 (44%), Gaps = 48/279 (17%)
Query: 6 IRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLG 64
+ G+ V FP+E Y Q YM ++ ++ K + LLE P+GTGKT LL +A+
Sbjct: 5 VDGLLVYFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLIVAY----- 59
Query: 65 SFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK-TSNYRPKM 123
I + V ++Y SRT ++ +VI ELK NY K
Sbjct: 60 ------------ILENPHVVRK----------LIYCSRTVPEIEKVIAELKHLMNYYEKQ 97
Query: 124 ---------VILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHH--SRVADY 171
++L SR+ +CIH EVS R G + C + R H + V Y
Sbjct: 98 TGAMPNITGLVLSSRKNMCIHPEVSREREGKIVDARCYGMTASYVRERAAHDESAPVCQY 157
Query: 172 MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWF 225
+ G E + I+DL GR CPYF++R +V Y YL+DP
Sbjct: 158 YEGFQAEGKENMLPPGVYSIDDLKEFGRERNWCPYFLSRFAINQAHVVVYSYYYLLDPKV 217
Query: 226 RKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLL 263
+ + E + S+++ DEAHN++ +C D+ S ++ L+
Sbjct: 218 AEVVSKELARESVVVCDEAHNIDNVCVDSMSVKINRRLI 256
>gi|238881932|gb|EEQ45570.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 841
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 18/297 (6%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP----HVIT 470
+L++ +P +E + ++L GT+ PM + L + P N HVI
Sbjct: 531 SLNYMLLDPSAVFKEIVD-QAKCVLLCGGTMEPMSDYMDYLFPSVPTNKINTFACGHVIP 589
Query: 471 SKQIWAGIVPVGP-SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ + + P+ + S++ R+ + LG ++ I + VP G++IFFPSY +
Sbjct: 590 KENL--QVFPISQWNDTNFEFSFQKRNDSKQLMALGEFLIEITKRVPYGVVIFFPSYKYL 647
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFF 589
DQ + W++T I I K EP+ S + +Y L T GA+ F
Sbjct: 648 DQVLQFWRDTK------ILTSIESEKTIFREPKDPSNVEKVLNEY-GYLIQTERKGAILF 700
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
+V GK+SEG++F+D RAV++ G+P+ ++ KR+Y++ S GG + K
Sbjct: 701 SVVGGKMSEGINFSDDLARAVIMVGLPYPNAYSGEMVTKRKYIETSVLSNGGTTTDAK-- 758
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
++Y RAVNQ++GR IRH +DY I D RF+ P ++++S W++ I
Sbjct: 759 -EKSRNYYENLCMRAVNQSIGRSIRHINDYSIIYLVDRRFSTPRIQNKLSQWVKERI 814
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 20/191 (10%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREV-SLLRGSAQ 146
I ++SRTHSQL Q +L+ +N+ R K + LGSR+QLCI+ +V S +
Sbjct: 203 IFFSSRTHSQLNQFSSQLRLTNFQASFEDLEERTKYIPLGSRKQLCINEKVRSKENDQSV 262
Query: 147 NNACRFLCKKGTNRRCNHHSRVADYMKNN--PHLGDEPI----DIEDLVNIGRTFGPCPY 200
N+AC L ++ TN C + + +YM ++ D + DIEDL +G CPY
Sbjct: 263 NDACLDL-QRETNG-CQYLPK--NYMMSSVTKEFADLSLAKIRDIEDLNELGIELNICPY 318
Query: 201 FMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLSS 260
+ R+ + +I+ PY + RK L ++ K+SI+I DEAHN+ + S ++S
Sbjct: 319 YSVRKGIEMTEIISLPYQMIFQDTTRKILNLDIKDSIIIIDEAHNIIDVITSMYSIKITS 378
Query: 261 GLLTACISEAK 271
L I K
Sbjct: 379 DQLNKVIKSLK 389
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ 72
P+ YD Q+ M+ + +++N L ESPTGTGKTL ++C+++ W ++ +T +
Sbjct: 13 PYTPYDIQIQLMDAIYNTIENGYKIGLFESPTGTGKTLSIICSSMTWLRTFKRNNTF-LE 71
Query: 73 VNNQI 77
NN++
Sbjct: 72 TNNEV 76
>gi|15218736|ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
gi|30678494|ref|NP_849584.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
gi|57013122|sp|Q8W4M7.1|ERCC2_ARATH RecName: Full=DNA repair helicase UVH6; AltName: Full=ERCC2
homolog; AltName: Full=RAD3 homolog; Short=AtUVH6;
Short=AtXPD; AltName: Full=UV hypersensitive protein 6;
AltName: Full=XPD homolog
gi|17064790|gb|AAL32549.1| Strong similarity to nucleotide excision repair protein
[Arabidopsis thaliana]
gi|20258776|gb|AAM13910.1| putative DNA repair protein [Arabidopsis thaliana]
gi|22651570|gb|AAM10793.1| DNA repair/transcription factor protein [Arabidopsis thaliana]
gi|34098809|gb|AAQ56787.1| At1g03190 [Arabidopsis thaliana]
gi|332189421|gb|AEE27542.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
gi|332189422|gb|AEE27543.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
Length = 758
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 148/293 (50%), Gaps = 24/293 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L C + +A++ F R + S+++TSGTLSP+D + + L + +T I
Sbjct: 433 LQLSCHDASLAIKPVFDRFQ--SVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCI 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
++ G +++ + R + G +V + IVPDG++ FF SY MD IA
Sbjct: 491 CPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIA 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W N T I + I + K +E + LA+++Y + GAVFF+V RG
Sbjct: 551 TW------NETGILKEIMQQKLVFIETQDVVETTLALDNY--RRACDCGRGAVFFSVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KV+EG+DF H GR VV+ G+PF +R + EYL Q + G++ L+F
Sbjct: 603 KVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDF----LTF---- 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRVIR + DYG +IF D+R++ ++S++ WI H++
Sbjct: 655 -----DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 702
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 56/277 (20%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+KI + V FP++ Y Q YM ++ ++L K + LLE PTGTGKT+ LL ++R S
Sbjct: 3 FKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYRLS 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYR- 120
DS + ++Y +RT ++ + + ELK +Y+
Sbjct: 63 --------------------------RPDSPI-KLVYCTRTVHEMEKTLGELKLLHDYQV 95
Query: 121 ------PKMVILG--SREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRC------NHH 165
K++ LG SR+ LC++ +V +A+N ++ C+K T N +
Sbjct: 96 RHLGTQAKILALGLSSRKNLCVNTKVL----AAENRDSVDAACRKRTASWVRALSTENPN 151
Query: 166 SRVADYMKN------NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
+ D+ +N N L +EDL G+ G CPYF+ R + + +++ Y Y
Sbjct: 152 VELCDFFENYEKAAENALLPPGVYTLEDLRAFGKNRGWCPYFLARHMIQFANVIVYSYQY 211
Query: 220 LIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAAS 255
L+DP + E K S+++FDEAHN++ +C +A S
Sbjct: 212 LLDPKVAGFISKELQKESVVVFDEAHNIDNVCIEALS 248
>gi|34527746|dbj|BAC85446.1| unnamed protein product [Homo sapiens]
Length = 453
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 147/296 (49%), Gaps = 24/296 (8%)
Query: 412 ASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVIT 470
A+ L + C + +A++ F R + S+I+TSGTLSP+D + + L + +
Sbjct: 122 ANPILHFSCMDASLAIKPVFERFQ--SVIITSGTLSPLDIYPKILDFHPVTMATFTMTLA 179
Query: 471 SKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMD 530
+ I+ G ++S R+ I + GN ++ ++ +VPDG++ FF SY M+
Sbjct: 180 RVCLCPMIIGRGNDQVAISSKLETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYME 239
Query: 531 QCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFA 590
+A W I E I ++K +E + + +A+E Y ++ GA+ +
Sbjct: 240 STVASWYEQG------ILENIQRNKLLFIETQDGAETSVALEKYQEACENGR--GAILLS 291
Query: 591 VCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSF 650
V RGKVSEG+DF H GRAV++ G+P+ ++ + EYL Q Q
Sbjct: 292 VARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQ------------- 338
Query: 651 LSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHI 706
+ D+ A R Q VGR IR + DYG ++F D+RFA ++ ++ WIQ H+
Sbjct: 339 IRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHL 394
>gi|297843126|ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
lyrata]
gi|297335286|gb|EFH65703.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
lyrata]
Length = 758
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 148/293 (50%), Gaps = 24/293 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L C + +A++ F R + S+++TSGTLSP+D + + L + +T I
Sbjct: 433 LQLSCHDASLAIKPVFDRFQ--SVVITSGTLSPIDLYPRLLSFTPVVSRSFKMSMTRDCI 490
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
++ G +++ + R + G +V + IVPDG++ FF SY MD IA
Sbjct: 491 CPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIA 550
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W N T I + I + K +E + LA+++Y + GAVFF+V RG
Sbjct: 551 TW------NETGILKEIMQQKLVFIETQDVVETTLALDNY--RRACDCGRGAVFFSVARG 602
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KV+EG+DF H GR VV+ G+PF +R + EYL Q + G++ L+F
Sbjct: 603 KVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDF----LTF---- 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRVIR + DYG +IF D+R++ ++S++ WI H++
Sbjct: 655 -----DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 702
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 133/277 (48%), Gaps = 56/277 (20%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+KI + V FP++ Y Q YM ++ ++L K + LLE PTGTGKT+ LL ++R S
Sbjct: 3 FKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYRLS 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
DS + ++Y +RT ++ + + ELK +Y+
Sbjct: 63 --------------------------RPDSPI-KLVYCTRTVHEMEKTLGELKLLHDYQV 95
Query: 122 K------MVI---LGSREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRC------NHH 165
+ M++ L SR+ LC++ +V +A+N ++ C+K T N +
Sbjct: 96 RHLGAQAMILAIGLSSRKNLCVNTKVL----AAENRDSVDAACRKRTASWVRALSTENPN 151
Query: 166 SRVADYMKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
+ DY +N D + +EDL G+ G CPYF+ R + + +++ Y Y
Sbjct: 152 VELCDYFENYEKAADNALLPPGVYTLEDLRAFGKNRGWCPYFLARHMVQFANVIVYSYQY 211
Query: 220 LIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAAS 255
L+DP + E K S+++FDEAHN++ +C +A S
Sbjct: 212 LLDPKVAGIISKELQKESVVVFDEAHNIDNVCIEALS 248
>gi|296822250|ref|XP_002850254.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
gi|238837808|gb|EEQ27470.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
Length = 792
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 146/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + L + L+ + +
Sbjct: 432 LHFTCLDAAIAIKPVFDRF--SSVIITSGTLSPLEMYPKMLGFDAALQESYSMTLARRSF 489
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++SS++ R+ + GN ++ RI PDG+++FFPSY M+ I+
Sbjct: 490 LPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNMLLEFCRITPDGVVVFFPSYLYMESIIS 549
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L ++W +K +VE S LA+E Y + + GAV V RG
Sbjct: 550 MWQGM--GILDSVW----NYKLILVETPDSQESSLALETY--RTACCNGRGAVLLCVARG 601
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 602 KVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 655 ------ALRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRNQLPKWI 694
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 51/291 (17%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + + FP+ Y Q YM + + L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FYIDDLPILFPYPRIYPEQYAYMCDLKKVLDAGGHCVLEMPSGTGKTITLLALIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
L +Y SRT S++ + + EL YR
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALSELHALMKYRS 94
Query: 122 ---------KMVILGSREQLCIHREVSLLR-GSAQNNACRFLC--------KKGTN-RRC 162
+ + L SR+ LC+H V + G+ + CR L +KG + C
Sbjct: 95 QKLGAVEDFRALGLTSRKNLCLHPSVKREKSGTVVDARCRSLTAGFVKEKKEKGEDVELC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + ++ L+ G + CPYF R + + +++ Y+YL+D
Sbjct: 155 IYHENL-DLLEPGNLVPPGVFTLDGLIKYGEQYKQCPYFSARRMMQYCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
P + + E ++SI++FDEAHN++ +C ++ S DL+ L A N
Sbjct: 214 PKIAERVSKELSRDSIIVFDEAHNIDNVCIESLSIDLTEDSLRKASRGANN 264
>gi|225681891|gb|EEH20175.1| TFIIH basal transcription factor complex helicase subunit
[Paracoccidioides brasiliensis Pb03]
Length = 773
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 145/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + L L+ + +
Sbjct: 408 LHFTCLDAAIAIKPVFDRF--SSVIITSGTLSPLEMYPKMLGFTTVLQESYSMTLARRSF 465
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 466 LPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIIS 525
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +IW +K +VE S LA+E Y + + GA+ V RG
Sbjct: 526 MWQGM--GILDSIW----NYKLILVETPDSQESSLALETY--RTACCNGRGAILLCVARG 577
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GR V+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 578 KVSEGIDFDHHYGRTVICIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSFD 630
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 631 ------AMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRAQLPKWI 670
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 50/264 (18%)
Query: 30 QSLQNKCNALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQVNNQISGSQSSVNSSQS 89
++L + +LE P+GTGKT+ LL +A+ Q
Sbjct: 6 KTLDAGGHCVLEMPSGTGKTVSLLSLIIAY----------------------------QQ 37
Query: 90 GDSKLPTILYTSRTHSQLRQVIQELKT-SNYRPKMVI---------LGSREQLCIHREVS 139
+ ++Y SRT S++ + + ELK YR + + L SR+ LC+H V
Sbjct: 38 HKPEQRKLIYCSRTMSEIEKALAELKALMKYRAQQLGYTEDFRGLGLTSRKNLCLHPSVK 97
Query: 140 LLR-GSAQNNACRFLCKKGTNRR---------CNHHSRVADYMKNNPHLGDEPIDIEDLV 189
+ G+ + CR L + C +H + D ++ + + ++D++
Sbjct: 98 REKSGTIVDARCRSLTAGFVKEKKERGEDVELCIYHENL-DLLEPSNLVPPGVFTLDDMI 156
Query: 190 NIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEG 248
G CPYF R + +++ Y+YL+DP + + E K+SI++FDEAHN++
Sbjct: 157 KYGEQHKQCPYFSVRRMMPFCNVIIYSYHYLLDPKIAERVSQELSKDSIVVFDEAHNIDN 216
Query: 249 ICADAASFDLSSGLLTACISEAKN 272
+C ++ S DL+ L A N
Sbjct: 217 VCIESLSIDLTEDSLRKASRGANN 240
>gi|182705254|sp|Q92771.3|DDX12_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX12; AltName:
Full=CHL1-related protein 2; Short=hCHLR2; AltName:
Full=DEAD/H box protein 12
Length = 950
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 151/318 (47%), Gaps = 25/318 (7%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVEN------PHV 468
TL + NP + + + E ++++ GT+ P+ +F Q+L + E HV
Sbjct: 613 TLKFLLLNPAVHFAQVVK-ECRAVVIAGGTMQPVSNFRQQLLACAGVEAERVVEFSCGHV 671
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
I I ++ G S L +++ RD + E+G + N+ +V G++ FFPSY
Sbjct: 672 IPPDNILPLVICSGVSNQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFPSYEY 731
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTS-----T 583
+ Q A W+ + R+ KK EP+ + + Y L+
Sbjct: 732 LRQVHAHWEKGG------LLGRLAARKKIFQEPKSAHQVEQVLLAYSRCLQACGQERGPV 785
Query: 584 SGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEY 643
+GA+ +V GK+SEG++F+D+ GR VV+ GMPF + +++ K YLD G+
Sbjct: 786 TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQA 845
Query: 644 KETKLSFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
G+ +AVNQ++GR IRH+ D+ +I+ D+R+A P +++ WI+
Sbjct: 846 H-------PGKALVENLCMKAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIR 898
Query: 704 PHIQCYSKFGDVVYTLTR 721
++ + FG + + +
Sbjct: 899 ARVEVKATFGPAIAAVQK 916
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNYRP--KMVILGSREQLCIHREVSLLRGSAQ--NNACRF 152
I + SRTHSQL Q + E+K S + ++V LGSR+ LC++ +V L GS Q NN C
Sbjct: 248 IYHCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVRSL-GSVQLINNRCVD 306
Query: 153 LCKK----------GTNRRCNHHSRVADYMKNNPHLG---DEPI----DIEDLVNIGRTF 195
+ + +R + A N+ +G DE + D+E L+ +G+
Sbjct: 307 MQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEA 366
Query: 196 GPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAAS 255
CPY+ +R +V PY L+ R+ G+ ++ ++I DEAHNL S
Sbjct: 367 RACPYYGSRLAIPAAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTTTSMHS 426
Query: 256 FDLSSGLLTACISEAKNCIDISSTRRGQSSDETLNPDNFAILRALLLKLEKRIAEVPINS 315
++S L S+ ++ R L N L+ +L LEK +A + N
Sbjct: 427 VEVSGSQLCQAHSQLLQYMERYGKR--------LKAKNLMYLKQILYLLEKFVAVLGGNI 478
Query: 316 KE 317
K+
Sbjct: 479 KQ 480
>gi|3850576|gb|AAC72116.1| Strong similarity to gb|U04968 nucleotide excision repair protein
(ERCC2) from Cricetulus grisseus [Arabidopsis thaliana]
Length = 735
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 148/293 (50%), Gaps = 24/293 (8%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L C + +A++ F R + S+++TSGTLSP+D + + L + +T I
Sbjct: 446 LQLSCHDASLAIKPVFDRFQ--SVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCI 503
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
++ G +++ + R + G +V + IVPDG++ FF SY MD IA
Sbjct: 504 CPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIA 563
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W N T I + I + K +E + LA+++Y + GAVFF+V RG
Sbjct: 564 TW------NETGILKEIMQQKLVFIETQDVVETTLALDNY--RRACDCGRGAVFFSVARG 615
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KV+EG+DF H GR VV+ G+PF +R + EYL Q + G++ L+F
Sbjct: 616 KVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDF----LTF---- 667
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRVIR + DYG +IF D+R++ ++S++ WI H++
Sbjct: 668 -----DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLR 715
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 56/277 (20%)
Query: 4 YKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+KI + V FP++ Y Q YM ++ ++L K + LLE PTGTGKT+ LL ++R S
Sbjct: 3 FKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYRLS 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYR- 120
DS + ++Y +RT ++ + + ELK +Y+
Sbjct: 63 --------------------------RPDSPI-KLVYCTRTVHEMEKTLGELKLLHDYQV 95
Query: 121 ------PKMVILG--SREQLCIHREVSLLRGSAQN-NACRFLCKKGTNRRC------NHH 165
K++ LG SR+ LC++ +V +A+N ++ C+K T N +
Sbjct: 96 RHLGTQAKILALGLSSRKNLCVNTKVL----AAENRDSVDAACRKRTASWVRALSTENPN 151
Query: 166 SRVADYMKN------NPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
+ D+ +N N L +EDL G+ G CPYF+ R + + +++ Y Y
Sbjct: 152 VELCDFFENYEKAAENALLPPGVYTLEDLRAFGKNRGWCPYFLARHMIQFANVIVYSYQY 211
Query: 220 LIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAAS 255
L+DP + E K S+++FDEAHN++ +C +A S
Sbjct: 212 LLDPKVAGFISKELQKESVVVFDEAHNIDNVCIEALS 248
>gi|68472519|ref|XP_719578.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
gi|68472770|ref|XP_719450.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|74586763|sp|Q5AD67.1|CHL1_CANAL RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|46441268|gb|EAL00566.1| hypothetical protein CaO19.2000 [Candida albicans SC5314]
gi|46441401|gb|EAL00698.1| hypothetical protein CaO19.9551 [Candida albicans SC5314]
Length = 842
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 145/294 (49%), Gaps = 18/294 (6%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENP----HVIT 470
+L++ +P +E + ++L GT+ PM + L + P N HVI
Sbjct: 532 SLNYMLLDPSAVFKEIVD-QAKCVLLCGGTMEPMSDYMDYLFPSVPTNKINTFACGHVIP 590
Query: 471 SKQIWAGIVPVGP-SGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLM 529
+ + + P+ + SY+ R+ + LG ++ I + VP G++IFFPSY +
Sbjct: 591 KENL--QVFPISQWNDTNFEFSYQKRNDSKQLMALGEFLIEITKRVPYGVVIFFPSYKYL 648
Query: 530 DQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFF 589
DQ + W++T I I K EP+ S + +Y L T GA+ F
Sbjct: 649 DQVLQFWRDTK------ILTSIESEKTIFREPKDPSNVEKVLNEY-GYLIQTERKGAILF 701
Query: 590 AVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLS 649
+V GK+SEG++F+D RAV++ G+P+ ++ KR+Y++ S GG + K
Sbjct: 702 SVVGGKMSEGINFSDDLARAVIMVGLPYPNAYSGEMVTKRKYIETSELSNGGTTTDAK-- 759
Query: 650 FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQ 703
++Y RAVNQ++GR IRH +DY I D RF+ P ++++S W++
Sbjct: 760 -EKSRNYYENLCMRAVNQSIGRSIRHINDYSIIYLVDRRFSTPRIQNKLSQWVK 812
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 22/192 (11%)
Query: 97 ILYTSRTHSQLRQVIQELKTSNY---------RPKMVILGSREQLCIHREVSLLRGSAQ- 146
I ++SRTHSQL Q +L+ +N+ R K + LGSR+QLCI+ +V +G+ Q
Sbjct: 203 IFFSSRTHSQLNQFSSQLRLTNFQASFEDLEERTKYIPLGSRKQLCINEKVRS-KGNDQS 261
Query: 147 -NNACRFLCKKGTNRRCNHHSRVADYMKNN--PHLGDEPI----DIEDLVNIGRTFGPCP 199
N+AC L ++ TN C + + +YM ++ D + DIEDL +G CP
Sbjct: 262 VNDACLDL-QRETNG-CQYLPK--NYMMSSVTKEFADLSLAKIRDIEDLNELGIELNICP 317
Query: 200 YFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNLEGICADAASFDLS 259
Y+ R+ + +I+ PY + RK L ++ K+SI+I DEAHN+ + S ++
Sbjct: 318 YYSVRKGIEMTEIISLPYQMIFQDTTRKILNLDIKDSIIIIDEAHNIIDVITSMYSIKIT 377
Query: 260 SGLLTACISEAK 271
S L I K
Sbjct: 378 SDQLNKVIKSLK 389
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 14 PFEAYDCQLVYMEKVIQSLQNKCN-ALLESPTGTGKTLCLLCATLAWRKSLGSFSTLGSQ 72
P+ YD Q+ M+ + +++N L ESPTGTGKTL ++C+++ W ++ +T +
Sbjct: 13 PYTPYDIQIQLMDAIYNTIENGYKIGLFESPTGTGKTLSIICSSMTWLRTFKRNNTF-LE 71
Query: 73 VNNQI 77
NN++
Sbjct: 72 TNNEV 76
>gi|350629867|gb|EHA18240.1| DNA repair helicase, subunit of TFIIH [Aspergillus niger ATCC 1015]
Length = 811
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 147/289 (50%), Gaps = 26/289 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + IA++ F R S+I+TSGTLSP++ + + L N ++ + +
Sbjct: 441 VLHFTCLDAAIAIKPVFERF--SSVIITSGTLSPLEMYPKMLGFNAVMQESYSMTLARRS 498
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I
Sbjct: 499 FLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDGVVVFFPSYLYMESII 558
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W+ G L +IW +K +VE + LA+E Y + + GA+ V R
Sbjct: 559 SMWQGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGALLLCVAR 610
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS
Sbjct: 611 GKVSEGIDFDHHYGRAVINIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSF 663
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+ A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 664 D------AMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRNQLPKWI 704
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 128/303 (42%), Gaps = 65/303 (21%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
L +Y SRT S++ + + ELK
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMKFRA 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLRGSAQNNA-CRFLCKKGTNRR-------- 161
T ++R + L SR+ LC+H V + A +A CR L +
Sbjct: 95 KELGYTEDFRA--LGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKEKKERGEDVE 152
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRE--LQKTVDIVFAP-- 216
C +H + D ++ + + ++ L+ G CPYF R LQ IV P
Sbjct: 153 LCVYHENL-DLLEPHNLVPPGVFTLDGLLKYGEEHKQCPYFSARRMLLQAYSQIVQMPFC 211
Query: 217 ------YNYLIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISE 269
Y+YL+DP + + E K+ I++FDEAHN++ +C ++ S DL+ L
Sbjct: 212 NVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKATRG 271
Query: 270 AKN 272
A N
Sbjct: 272 ANN 274
>gi|159485656|ref|XP_001700860.1| hypothetical protein CHLREDRAFT_113235 [Chlamydomonas reinhardtii]
gi|158281359|gb|EDP07114.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 273
Score = 141 bits (355), Expect = 2e-30, Method: Composition-based stats.
Identities = 86/268 (32%), Positives = 138/268 (51%), Gaps = 28/268 (10%)
Query: 437 SIILTSGTLSPMDSF-AQELKLNFPLRVEN---PHVITSKQIWAGIVPVGPSGYLLNSSY 492
S++L SGTLSP+ AQ L P R+ + HV+ + Q+ A + GP+G L S+
Sbjct: 21 SVVLASGTLSPVQGLVAQLLPAVPPWRLRHFACGHVVPACQLAALVAARGPTGLPLQLSH 80
Query: 493 RNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIACWKNTSHGNLTTIWERIC 552
R +ELG +VNI VP G+++F PS+ +DQ + W+ T ++ +
Sbjct: 81 GRRGEPRVMEELGRLLVNICTAVPAGVVVFAPSFAYLDQLVCAWQRTG------VYGALA 134
Query: 553 KHKKPVVEPRQS-SLFPLAI-------EDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFAD 604
K+ VEPR + + P+ + +A +GA+ +V GK+SEG++F D
Sbjct: 135 SRKRVFVEPRTAGQVAPVQLCAAVCRCAQGVAAAPRRRLTGALLLSVVGGKLSEGINFGD 194
Query: 605 HAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGEDWYNQQASRA 664
GR VV+ G+P+ +DP++R + +LD + ++ +Y+ +A
Sbjct: 195 DLGRCVVVLGLPYPNPSDPELRERMRFLD----------EAAAVAAAPAAAYYSGLCIKA 244
Query: 665 VNQAVGRVIRHRHDYGAIIFCDERFAHP 692
VNQ VGRVIRH DY A++ DER+ P
Sbjct: 245 VNQCVGRVIRHARDYAAVVLVDERYLPP 272
>gi|145240349|ref|XP_001392821.1| DNA repair helicase rad15 [Aspergillus niger CBS 513.88]
gi|134077338|emb|CAK39953.1| unnamed protein product [Aspergillus niger]
Length = 801
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 147/289 (50%), Gaps = 26/289 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + IA++ F R S+I+TSGTLSP++ + + L N ++ + +
Sbjct: 431 VLHFTCLDAAIAIKPVFERF--SSVIITSGTLSPLEMYPKMLGFNAVMQESYSMTLARRS 488
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I
Sbjct: 489 FLPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDGVVVFFPSYLYMESII 548
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W+ G L +IW +K +VE + LA+E Y + + GA+ V R
Sbjct: 549 SMWQGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGALLLCVAR 600
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS
Sbjct: 601 GKVSEGIDFDHHYGRAVINIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSF 653
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+ A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 654 D------AMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRNQLPKWI 694
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 55/293 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
L +Y SRT S++ + + ELK
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMKFRA 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLRGSAQNNA-CRFLCKKGTNRR-------- 161
T ++R + L SR+ LC+H V + A +A CR L +
Sbjct: 95 KELGYTEDFRA--LGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKEKKERGEDVE 152
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ + + ++ L+ G CPYF R + +++ Y+YL
Sbjct: 153 LCVYHENL-DLLEPHNLVPPGVFTLDGLLKYGEEHKQCPYFSARRMMPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+DP + + E K+ I++FDEAHN++ +C ++ S DL+ L A N
Sbjct: 212 LDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTEDSLRKATRGANN 264
>gi|240976653|ref|XP_002402458.1| DNA repair helicase rad3/xp-D, putative [Ixodes scapularis]
gi|215491179|gb|EEC00820.1| DNA repair helicase rad3/xp-D, putative [Ixodes scapularis]
Length = 758
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 160/320 (50%), Gaps = 31/320 (9%)
Query: 410 GKASRTLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHV 468
G + L+ C + IA++ F+R + S+I+TSGTLSP+D + + L +
Sbjct: 429 GVPNPVLNLSCMDASIAIKPVFNRFQ--SVIITSGTLSPVDMYPKILDFRPVISASFTIT 486
Query: 469 ITSKQIWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL 528
+ I IV G + S + RD I + G +V +A VPDG++ FF SY
Sbjct: 487 LARPSICPMIVSKGNDQVAMTSKFETRDDIAVVRNYGTLLVEVASSVPDGVVCFFTSYMY 546
Query: 529 MDQCIACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVF 588
++ +A W + ++I + K +E + ++ LA+ +Y+ ++ GAV
Sbjct: 547 LEGVVASWYEQG------VIDQIQRRKLLFIETQDAAETSLALVNYIKACEN--GRGAVL 598
Query: 589 FAVCRGKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKL 648
+V RGKVSEG+DF G+AV++ G+PF +R + EYL Q Q + ++ L
Sbjct: 599 LSVARGKVSEGVDF----GKAVLMFGIPFVYTQSRILRARLEYLRDQYQIRENDF----L 650
Query: 649 SFLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ- 707
+F A R Q VGR +R + DYG +IF D+RFA ++S++ WIQ +++
Sbjct: 651 TF---------DAMRHAAQCVGRALRGKTDYGIMIFADKRFARWDKRSKLPRWIQEYLKD 701
Query: 708 --CYSKFGDVVYTLTRFFRE 725
C + + + RF ++
Sbjct: 702 SLCNLSIEEAMQVVRRFLKQ 721
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 127/277 (45%), Gaps = 49/277 (17%)
Query: 1 MPTYKIRGIDVEFPFE-AYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAW 59
M + G+ V FP+E Y Q YM ++ Q L K + +LE P+GTGKT+ LL L++
Sbjct: 1 MRRIDVDGLTVFFPYEYIYPEQYSYMLELKQCLDAKGHGVLEMPSGTGKTVTLLSLILSY 60
Query: 60 RKSLGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK--TS 117
K + + + ++Y SRT ++ +V++EL+
Sbjct: 61 IK---------------------------ANPAMVSKLIYCSRTLPEIEKVVEELRRLLK 93
Query: 118 NYRPK----MVILG----SREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRRCNHHSRV 168
+Y + M +LG SR+ LCIH EVS R G + C L R+ V
Sbjct: 94 HYHKETGEDMNVLGLCLSSRKNLCIHPEVSKERDGHVVDGKCYLLTAPIYIRKSYRWDVV 153
Query: 169 ADY---MKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNY 219
+ ++N G E I ++DL G CPYF R+ +V Y+Y
Sbjct: 154 VTFRPVLQNFDAHGREFILPTGVYSLDDLKEYGMEHQYCPYFTARQAVLHATVVVYSYHY 213
Query: 220 LIDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAAS 255
L+DP + E ++S++IFDEAHN++ +C ++ S
Sbjct: 214 LLDPKIADLVSKEMTRSSVVIFDEAHNIDNVCIESMS 250
>gi|295671522|ref|XP_002796308.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284441|gb|EEH40007.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 797
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 145/288 (50%), Gaps = 26/288 (9%)
Query: 416 LSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
L + C + IA++ F R S+I+TSGTLSP++ + + L L+ + +
Sbjct: 432 LHFTCLDAAIAIKPVFDRF--SSVIITSGTLSPLEMYPKMLGFTTVLQESYSMTLARRSF 489
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCIA 534
IV G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I+
Sbjct: 490 LPMIVTRGSDQAQISSSFQIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPSYLYMESIIS 549
Query: 535 CWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCRG 594
W+ G L +IW +K +VE S LA+E Y + + GA+ V RG
Sbjct: 550 MWQGM--GILDSIW----NYKLILVETPDSQESSLALETY--RTACCNGRGAILLCVARG 601
Query: 595 KVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSGE 654
KVSEG+DF H GR V+ G+PF ++ + E+L Y+ + FLS +
Sbjct: 602 KVSEGIDFDHHYGRTVICIGVPFQYTESRILKARLEFL-------RENYRIRENDFLSFD 654
Query: 655 DWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 655 ------AMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRAQLPKWI 694
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIIAY--- 59
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKT-SNYRP 121
Q + ++Y SRT S++ + + ELK YR
Sbjct: 60 -------------------------QQHKPEQRKLIYCSRTMSEIEKALAELKALMKYRA 94
Query: 122 KMVI---------LGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR---------C 162
+ + L SR+ LC+H V + G+ + CR + + C
Sbjct: 95 QQLGYTEDFRGLGLTSRKNLCLHPSVKREKSGTIVDARCRSMTAGFVKEKKERGEDVELC 154
Query: 163 NHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLID 222
+H + D ++ + + ++D++ G CPYF R + +++ Y+YL+D
Sbjct: 155 IYHENL-DLLEPSNLVPPGVFTLDDMLKYGEQHKQCPYFSVRRMMPFCNVIIYSYHYLLD 213
Query: 223 PWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
P + + E K+SI++FDEAHN++ +C ++ S DL+ L A N
Sbjct: 214 PKIAERVSQELSKDSIVVFDEAHNIDNVCIESLSIDLTEDSLRKASRGANN 264
>gi|356499550|ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
Length = 758
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 152/295 (51%), Gaps = 26/295 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L C + +A++ F R + S+++TSGTLSP+D + + L N + +T
Sbjct: 432 VLQLCCHDASLAIKPVFERFQ--SVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDC 489
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
I ++ G +++ + R + + G ++ +A +VPDG++ FF SY MD +
Sbjct: 490 ICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIV 549
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
W N I + I +HK +E + LA+++Y K D GA+FF+V R
Sbjct: 550 NTW------NENGILKEIMQHKLVFIETQDVVETTLALDNY-RKACDCG-RGAIFFSVAR 601
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKR-EYLDLQAQSQGGEYKETKLSFLS 652
GKV+EG+DF H GR V++ G+PF T K+ L R EYL Q + G++ L+F
Sbjct: 602 GKVAEGIDFDRHYGRLVIMFGVPF-QYTLSKILLARLEYLRDTFQIKEGDF----LTF-- 654
Query: 653 GEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWIQPHIQ 707
A R Q VGRVIR + DYG +IF D+R++ ++S++ WI H+
Sbjct: 655 -------DALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPSWILSHLH 702
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 48/272 (17%)
Query: 5 KIRGIDVEFPFEA-YDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKSL 63
+I I V FP++ Y Q YM ++ ++L K + LLE PTGTGKT+ LL
Sbjct: 4 EIEDITVYFPYDKIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALL---------- 53
Query: 64 GSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELKTSNY---- 119
S + S V +S S + +LY +RT ++ + + EL+ ++
Sbjct: 54 ---SLITSYV---LSKPHSPLK-----------LLYCTRTVHEMEKTLAELRLLHHYQLR 96
Query: 120 ----RPKMVILG--SREQLCIH-REVSLLRGSAQNNACRFLCKKGTNRRCNHHSRV--AD 170
K++ LG SR+ LC++ R ++ + + CR L + V +
Sbjct: 97 HLGPAAKILALGLSSRKNLCVNPRVLAAENRDSVDAGCRKLTASWVRAVAAENPSVPSCE 156
Query: 171 YMKNNPHLGDEPI------DIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPW 224
+ + G + ++DL G+ G CPY++ R + + ++V Y YL+DP
Sbjct: 157 FFEQYERAGSSAVLPPGVYTLQDLRAYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPK 216
Query: 225 FRKGLGVEW-KNSILIFDEAHNLEGICADAAS 255
+ E K S+++FDEAHN++ +C +A S
Sbjct: 217 VAGIISKEMQKESVVVFDEAHNIDNVCIEALS 248
>gi|169763188|ref|XP_001727494.1| DNA repair helicase rad15 [Aspergillus oryzae RIB40]
gi|83770522|dbj|BAE60655.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 794
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 147/289 (50%), Gaps = 26/289 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + IA++ F R S+I+TSGTLSP++ + + L ++ + +
Sbjct: 431 VLHFTCLDAAIAIKPVFERF--SSVIITSGTLSPLEMYPKMLGFTTVMQESYSMTLARRS 488
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I
Sbjct: 489 FLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMESII 548
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W+ G L +IW +K +VE + LA+E Y + + GA+ V R
Sbjct: 549 SMWQGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGAILMCVAR 600
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS
Sbjct: 601 GKVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSF 653
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+ A R Q +GRV+R + DYG ++ D+RF +++Q+ WI
Sbjct: 654 D------AMRHAAQCLGRVLRGKDDYGVMVLADKRFQ--KKRTQLPKWI 694
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 55/293 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQMH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
L +Y SRT S++ + + ELK
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMKFRT 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR-------- 161
T ++R + L SR+ LC+H V + G+ + CR L +
Sbjct: 95 QQLGYTEDFRA--LGLTSRKNLCLHPSVKREKSGTIVDARCRSLTAGFVKEKKERGEDVE 152
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ + + ++ L+ G CPYF R + +++ Y+YL
Sbjct: 153 LCVYHENL-DLLEPHNLVPPGVFTLDGLLKYGEDHKQCPYFSARRMMPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+DP + + E+ K+ I++FDEAHN++ +C ++ S D++ L A N
Sbjct: 212 LDPKIAERVSREFSKDCIVVFDEAHNIDNVCIESLSIDITENSLRKATRGANN 264
>gi|358334134|dbj|GAA52588.1| fanconi anemia group J protein homolog [Clonorchis sinensis]
Length = 668
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 148/312 (47%), Gaps = 67/312 (21%)
Query: 415 TLSWWCFNPGIAMQEFSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQI 474
+L++WC NP + + + EV +IL SGTLSP+++ EL + FP+R+E HVI
Sbjct: 344 SLNFWCLNPSVVFSDLAS-EVRCLILVSGTLSPLEALEAELGVAFPIRLEAAHVI----- 397
Query: 475 WAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYL-MDQCI 533
P LL + D + +++ + ++ V GL + +Y +DQ +
Sbjct: 398 --------PKDRLLTT-----DLLSQLRQVKHVMLEPRSSV--GLDSWLAEFYAAVDQSV 442
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ + PV P +S + +GA+ AVCR
Sbjct: 443 MSLSRSP--------------RHPVSTPSAAS---------RCHSHSSQINGALVLAVCR 479
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQG--------GEYKE 645
GKVSEGLDFAD GR V+ G+P+ +P+V+ KRE+ D +S G G
Sbjct: 480 GKVSEGLDFADAYGRLVIAVGIPYPAFNNPQVQQKREFNDRAHRSPGTLPTPPTIGSPAN 539
Query: 646 TKLS------------FLSGEDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFA-HP 692
S L+G +WY+ QA RA+NQA+GR IRH +D+GAI D RF P
Sbjct: 540 AAASTSPSLSNPRITRVLTGSEWYDAQAYRALNQALGRCIRHLNDWGAIFLVDARFVEQP 599
Query: 693 SRK-SQISLWIQ 703
SR + IS WI+
Sbjct: 600 SRYLAGISRWIR 611
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 198 CPYFMTRELQKTVDIVFAPYNYLIDPWFRKGL 229
CPYF +R L KT DIVF PY+YL+DP R L
Sbjct: 90 CPYFCSRRLAKTADIVFCPYSYLLDPINRSAL 121
>gi|358370846|dbj|GAA87456.1| DNA repair helicase RAD3 [Aspergillus kawachii IFO 4308]
Length = 801
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 147/289 (50%), Gaps = 26/289 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + IA++ F R S+I+TSGTLSP++ + + L N ++ + +
Sbjct: 431 VLHFTCLDAAIAIKPVFDRF--SSVIITSGTLSPLEMYPKMLGFNAVMQESYSMTLARRS 488
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I
Sbjct: 489 FLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNLVLEFSRITPDGVVVFFPSYLYMESII 548
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W+ G L +IW +K +VE + LA+E Y + + GA+ V R
Sbjct: 549 SMWQGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGALLLCVAR 600
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS
Sbjct: 601 GKVSEGIDFDHHYGRAVINIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSF 653
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+ A R Q +GRV+R + DYG ++ D RF +++Q+ WI
Sbjct: 654 D------AMRHAAQCLGRVLRGKDDYGVMVLADRRFQ--KKRNQLPKWI 694
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 128/293 (43%), Gaps = 55/293 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A+++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
L +Y SRT S++ + + ELK
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMKFRA 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLRGSAQNNA-CRFLCKKGTNRR-------- 161
T ++R + L SR+ LC+H V + A +A CR L +
Sbjct: 95 KELGHTEDFRA--LGLTSRKNLCLHPSVKREKSGAVVDARCRSLTAGFVKEKKERGEDVE 152
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ + + ++DL+ G CPYF R + +++ Y+YL
Sbjct: 153 LCVYHENL-DLLEPHNLVPPGVFTLDDLLRYGEEHKQCPYFSARRMMPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+DP + + E K+ I++FDEAHN++ +C ++ S D++ L A N
Sbjct: 212 LDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKATRGANN 264
>gi|238489069|ref|XP_002375772.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus NRRL3357]
gi|220698160|gb|EED54500.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus NRRL3357]
gi|391869618|gb|EIT78813.1| RNA polymerase II transcription initiation [Aspergillus oryzae
3.042]
Length = 794
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 147/289 (50%), Gaps = 26/289 (8%)
Query: 415 TLSWWCFNPGIAMQE-FSRLEVGSIILTSGTLSPMDSFAQELKLNFPLRVENPHVITSKQ 473
L + C + IA++ F R S+I+TSGTLSP++ + + L ++ + +
Sbjct: 431 VLHFTCLDAAIAIKPVFERF--SSVIITSGTLSPLEMYPKMLGFTTVMQESYSMTLARRS 488
Query: 474 IWAGIVPVGPSGYLLNSSYRNRDSIEYKQELGNTIVNIARIVPDGLLIFFPSYYLMDQCI 533
+V G ++SS++ R+ + GN ++ +RI PDG+++FFPSY M+ I
Sbjct: 489 FLPMVVTRGSDQAQISSSFQIRNDPGVVRNYGNIVLEFSRITPDGIVVFFPSYLYMESII 548
Query: 534 ACWKNTSHGNLTTIWERICKHKKPVVEPRQSSLFPLAIEDYMAKLKDTSTSGAVFFAVCR 593
+ W+ G L +IW +K +VE + LA+E Y + + GA+ V R
Sbjct: 549 SMWQGM--GILDSIW----NYKLILVETPDAQESSLALETY--RTACCNGRGAILMCVAR 600
Query: 594 GKVSEGLDFADHAGRAVVITGMPFATMTDPKVRLKREYLDLQAQSQGGEYKETKLSFLSG 653
GKVSEG+DF H GRAV+ G+PF ++ + E+L Y+ + FLS
Sbjct: 601 GKVSEGIDFDHHYGRAVICIGVPFQYTESRILKARLEFLR-------ENYRIRENDFLSF 653
Query: 654 EDWYNQQASRAVNQAVGRVIRHRHDYGAIIFCDERFAHPSRKSQISLWI 702
+ A R Q +GRV+R + DYG ++ D+RF +++Q+ WI
Sbjct: 654 D------AMRHAAQCLGRVLRGKDDYGVMVLADKRFQ--KKRTQLPKWI 694
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 55/293 (18%)
Query: 4 YKIRGIDVEFPF-EAYDCQLVYMEKVIQSLQNKCNALLESPTGTGKTLCLLCATLAWRKS 62
+ I + V FP+ Y Q YM + ++L + +LE P+GTGKT+ LL +A++
Sbjct: 3 FFIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQMH 62
Query: 63 LGSFSTLGSQVNNQISGSQSSVNSSQSGDSKLPTILYTSRTHSQLRQVIQELK------- 115
L +Y SRT S++ + + ELK
Sbjct: 63 YPEHRKL----------------------------IYCSRTMSEIEKALAELKALMKFRT 94
Query: 116 -----TSNYRPKMVILGSREQLCIHREVSLLR-GSAQNNACRFLCKKGTNRR-------- 161
T ++R + L SR+ LC+H V + G+ + CR L +
Sbjct: 95 QQLGYTEDFRA--LGLTSRKNLCLHPSVKREKSGTIVDARCRSLTAGFVKEKKERGEDVE 152
Query: 162 -CNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYL 220
C +H + D ++ + + ++ L+ G CPYF R + +++ Y+YL
Sbjct: 153 LCVYHENL-DLLEPHNLVPPGVFTLDGLLKYGEDHKQCPYFSARRMMPFCNVIIYSYHYL 211
Query: 221 IDPWFRKGLGVEW-KNSILIFDEAHNLEGICADAASFDLSSGLLTACISEAKN 272
+DP + + E+ K+ I++FDEAHN++ +C ++ S D++ L A N
Sbjct: 212 LDPKIAERVSREFSKDCIVVFDEAHNIDNVCIESLSIDITEDSLRKATRGANN 264
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,579,651,518
Number of Sequences: 23463169
Number of extensions: 640743678
Number of successful extensions: 1641759
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 1750
Number of HSP's that attempted gapping in prelim test: 1626799
Number of HSP's gapped (non-prelim): 8820
length of query: 1036
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 883
effective length of database: 8,769,330,510
effective search space: 7743318840330
effective search space used: 7743318840330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)